Query psy6053
Match_columns 614
No_of_seqs 554 out of 3755
Neff 8.2
Searched_HMMs 29240
Date Sat Aug 17 01:18:43 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6053.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/6053hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4f6l_B AUSA reductase domain p 100.0 3.9E-37 1.3E-41 340.9 26.4 381 55-539 75-494 (508)
2 3ruf_A WBGU; rossmann fold, UD 100.0 6.7E-35 2.3E-39 307.1 24.8 315 100-489 23-345 (351)
3 4egb_A DTDP-glucose 4,6-dehydr 100.0 1.8E-34 6E-39 303.2 22.9 305 100-490 22-335 (346)
4 3enk_A UDP-glucose 4-epimerase 100.0 5.3E-34 1.8E-38 298.8 26.1 311 101-490 4-334 (341)
5 3m2p_A UDP-N-acetylglucosamine 100.0 1.1E-34 3.8E-39 300.5 20.6 289 102-490 2-294 (311)
6 3slg_A PBGP3 protein; structur 100.0 5.9E-34 2E-38 302.4 25.2 327 99-490 21-358 (372)
7 4id9_A Short-chain dehydrogena 100.0 7.3E-34 2.5E-38 298.6 22.4 298 97-490 14-338 (347)
8 4dqv_A Probable peptide synthe 100.0 3.5E-34 1.2E-38 314.6 20.2 298 99-424 70-382 (478)
9 2c20_A UDP-glucose 4-epimerase 100.0 8.6E-33 3E-37 288.3 26.0 304 103-490 2-322 (330)
10 4b8w_A GDP-L-fucose synthase; 100.0 1.4E-33 4.6E-38 291.5 19.2 295 99-490 3-312 (319)
11 3ko8_A NAD-dependent epimerase 100.0 2.6E-33 9E-38 289.8 20.0 302 103-494 1-311 (312)
12 1ek6_A UDP-galactose 4-epimera 100.0 2.3E-32 7.8E-37 287.2 27.3 310 102-490 2-338 (348)
13 1sb8_A WBPP; epimerase, 4-epim 100.0 2E-32 6.7E-37 288.5 26.8 313 100-489 25-347 (352)
14 3sxp_A ADP-L-glycero-D-mannohe 100.0 4.2E-33 1.4E-37 295.0 21.3 309 100-490 8-322 (362)
15 2pk3_A GDP-6-deoxy-D-LYXO-4-he 100.0 3.1E-32 1.1E-36 282.9 27.2 289 99-482 9-314 (321)
16 1gy8_A UDP-galactose 4-epimera 100.0 2E-32 6.8E-37 293.1 26.4 322 102-491 2-377 (397)
17 2hun_A 336AA long hypothetical 100.0 3.6E-32 1.2E-36 284.3 26.0 305 101-490 2-312 (336)
18 3ehe_A UDP-glucose 4-epimerase 100.0 6.6E-33 2.2E-37 287.3 19.8 245 103-425 2-253 (313)
19 2q1s_A Putative nucleotide sug 100.0 1.4E-32 4.9E-37 292.6 22.3 310 100-490 30-355 (377)
20 1orr_A CDP-tyvelose-2-epimeras 100.0 2.3E-32 7.8E-37 286.8 23.0 321 103-491 2-338 (347)
21 1r6d_A TDP-glucose-4,6-dehydra 100.0 6.2E-32 2.1E-36 282.7 25.6 303 103-490 1-312 (337)
22 1oc2_A DTDP-glucose 4,6-dehydr 100.0 3.2E-32 1.1E-36 286.1 22.8 302 102-490 4-323 (348)
23 4f6c_A AUSA reductase domain p 100.0 8E-32 2.7E-36 291.7 25.6 267 100-421 67-343 (427)
24 2c5a_A GDP-mannose-3', 5'-epim 100.0 4.4E-32 1.5E-36 289.1 22.9 299 101-490 28-339 (379)
25 1rkx_A CDP-glucose-4,6-dehydra 100.0 7.4E-32 2.5E-36 284.6 23.3 310 99-490 6-334 (357)
26 2bll_A Protein YFBG; decarboxy 100.0 1.1E-31 3.9E-36 281.2 23.9 265 103-424 1-274 (345)
27 2x4g_A Nucleoside-diphosphate- 100.0 1.6E-31 5.3E-36 280.0 24.2 248 101-425 12-264 (342)
28 1i24_A Sulfolipid biosynthesis 100.0 2.7E-32 9.1E-37 292.6 18.7 283 98-425 7-329 (404)
29 3gpi_A NAD-dependent epimerase 100.0 2.6E-32 8.9E-37 279.2 17.0 270 101-483 2-274 (286)
30 1rpn_A GDP-mannose 4,6-dehydra 100.0 6.1E-31 2.1E-35 274.8 27.4 256 102-424 14-279 (335)
31 1udb_A Epimerase, UDP-galactos 100.0 4.5E-31 1.5E-35 276.3 26.2 310 103-490 1-330 (338)
32 1kew_A RMLB;, DTDP-D-glucose 4 100.0 1.5E-31 5E-36 282.5 22.5 303 103-490 1-335 (361)
33 2yy7_A L-threonine dehydrogena 100.0 2.7E-31 9.2E-36 274.6 22.0 296 102-483 2-308 (312)
34 2p5y_A UDP-glucose 4-epimerase 100.0 2.9E-31 9.9E-36 274.6 22.0 292 103-490 1-308 (311)
35 1e6u_A GDP-fucose synthetase; 100.0 2.1E-31 7.1E-36 276.7 19.7 292 101-490 2-313 (321)
36 3vps_A TUNA, NAD-dependent epi 100.0 2.3E-32 7.8E-37 283.4 11.7 292 101-493 6-306 (321)
37 2b69_A UDP-glucuronate decarbo 100.0 2.6E-30 8.9E-35 271.3 24.6 299 100-490 25-331 (343)
38 1z45_A GAL10 bifunctional prot 100.0 6.9E-30 2.4E-34 293.4 27.9 325 99-500 8-359 (699)
39 2z1m_A GDP-D-mannose dehydrata 100.0 8.2E-30 2.8E-34 266.9 25.3 256 101-425 2-269 (345)
40 2rh8_A Anthocyanidin reductase 100.0 5.3E-30 1.8E-34 268.2 20.9 307 102-491 9-332 (338)
41 2pzm_A Putative nucleotide sug 100.0 2.3E-30 7.9E-35 270.4 17.8 244 95-423 13-265 (330)
42 3ius_A Uncharacterized conserv 100.0 6.4E-30 2.2E-34 261.2 20.6 274 102-483 5-281 (286)
43 2ydy_A Methionine adenosyltran 100.0 6.2E-30 2.1E-34 265.0 19.7 289 102-492 2-299 (315)
44 1n2s_A DTDP-4-, DTDP-glucose o 100.0 2.6E-29 8.9E-34 258.2 23.9 231 103-424 1-238 (299)
45 3ajr_A NDP-sugar epimerase; L- 100.0 4.8E-29 1.6E-33 258.4 25.7 290 104-482 1-301 (317)
46 1t2a_A GDP-mannose 4,6 dehydra 100.0 6.2E-29 2.1E-33 264.1 27.2 262 103-425 25-298 (375)
47 1z7e_A Protein aRNA; rossmann 100.0 2.1E-29 7E-34 287.5 24.7 268 99-423 312-588 (660)
48 3sc6_A DTDP-4-dehydrorhamnose 100.0 4.1E-29 1.4E-33 255.3 23.2 224 103-425 6-236 (287)
49 2q1w_A Putative nucleotide sug 100.0 2.8E-29 9.5E-34 262.6 22.4 245 94-423 13-267 (333)
50 2p4h_X Vestitone reductase; NA 100.0 1.5E-29 5.2E-34 262.6 19.9 258 102-420 1-267 (322)
51 1db3_A GDP-mannose 4,6-dehydra 100.0 3E-29 1E-33 265.8 22.6 262 102-425 1-274 (372)
52 2x6t_A ADP-L-glycero-D-manno-h 100.0 1.7E-29 5.8E-34 266.6 20.4 249 100-423 44-304 (357)
53 1vl0_A DTDP-4-dehydrorhamnose 100.0 1E-28 3.5E-33 253.0 24.8 223 102-424 12-241 (292)
54 2c29_D Dihydroflavonol 4-reduc 100.0 1.8E-29 6.1E-34 264.2 18.9 261 101-420 4-271 (337)
55 1y1p_A ARII, aldehyde reductas 100.0 1.7E-29 6E-34 264.0 18.6 279 96-423 5-293 (342)
56 1n7h_A GDP-D-mannose-4,6-dehyd 100.0 1.1E-28 3.7E-33 262.8 25.0 257 103-423 29-301 (381)
57 1eq2_A ADP-L-glycero-D-mannohe 100.0 1.3E-29 4.5E-34 261.5 17.3 245 104-423 1-257 (310)
58 4b4o_A Epimerase family protei 100.0 1.4E-28 4.7E-33 253.1 23.8 230 103-425 1-241 (298)
59 2hrz_A AGR_C_4963P, nucleoside 100.0 4.6E-28 1.6E-32 253.8 24.7 259 100-424 12-286 (342)
60 2jl1_A Triphenylmethane reduct 100.0 4E-28 1.4E-32 247.8 21.5 220 103-425 1-222 (287)
61 2gn4_A FLAA1 protein, UDP-GLCN 100.0 1.1E-27 3.9E-32 251.8 24.4 243 93-422 12-263 (344)
62 3oh8_A Nucleoside-diphosphate 100.0 3.2E-28 1.1E-32 269.7 20.5 234 102-425 147-388 (516)
63 3dhn_A NAD-dependent epimerase 100.0 1.4E-28 4.7E-33 242.6 15.4 222 102-411 4-227 (227)
64 2v6g_A Progesterone 5-beta-red 100.0 4.2E-28 1.4E-32 256.1 19.2 251 102-425 1-275 (364)
65 3nzo_A UDP-N-acetylglucosamine 100.0 7.9E-27 2.7E-31 250.2 24.6 250 95-424 28-285 (399)
66 3st7_A Capsular polysaccharide 99.9 6.2E-28 2.1E-32 255.9 15.1 220 103-427 1-223 (369)
67 2zcu_A Uncharacterized oxidore 99.9 8.5E-27 2.9E-31 237.7 19.6 215 104-425 1-218 (286)
68 3rft_A Uronate dehydrogenase; 99.9 5.8E-27 2E-31 237.4 17.0 220 101-423 2-225 (267)
69 2ggs_A 273AA long hypothetical 99.9 2.5E-26 8.5E-31 232.6 20.7 225 103-426 1-231 (273)
70 3ay3_A NAD-dependent epimerase 99.9 4.7E-27 1.6E-31 237.8 12.9 219 102-423 2-224 (267)
71 3dqp_A Oxidoreductase YLBE; al 99.9 4E-27 1.4E-31 231.1 11.4 209 103-415 1-210 (219)
72 3i6i_A Putative leucoanthocyan 99.9 1.9E-26 6.7E-31 242.2 17.2 237 100-426 8-247 (346)
73 3e8x_A Putative NAD-dependent 99.9 1.5E-26 5.1E-31 229.7 15.0 217 99-417 18-235 (236)
74 3e48_A Putative nucleoside-dip 99.9 2.6E-25 8.7E-30 227.4 22.5 218 103-426 1-221 (289)
75 3h2s_A Putative NADH-flavin re 99.9 4.6E-25 1.6E-29 216.7 15.4 215 103-410 1-221 (224)
76 1xq6_A Unknown protein; struct 99.9 2.9E-25 9.8E-30 221.7 14.0 231 101-422 3-252 (253)
77 3ew7_A LMO0794 protein; Q8Y8U8 99.9 2.4E-24 8.1E-29 210.8 16.9 216 103-411 1-220 (221)
78 2a35_A Hypothetical protein PA 99.9 3.4E-25 1.2E-29 216.0 9.1 208 101-411 4-213 (215)
79 2bka_A CC3, TAT-interacting pr 99.9 3.7E-24 1.3E-28 212.9 16.5 212 100-402 16-228 (242)
80 1qyd_A Pinoresinol-lariciresin 99.9 7E-24 2.4E-28 219.1 18.3 240 102-426 4-246 (313)
81 2wm3_A NMRA-like family domain 99.9 7E-24 2.4E-28 217.9 18.1 232 102-425 5-238 (299)
82 1xgk_A Nitrogen metabolite rep 99.9 1.9E-23 6.5E-28 220.2 21.2 233 102-425 5-241 (352)
83 1qyc_A Phenylcoumaran benzylic 99.9 3.4E-23 1.2E-27 213.4 16.7 237 102-425 4-240 (308)
84 1hdo_A Biliverdin IX beta redu 99.9 2.3E-23 7.9E-28 201.3 13.8 202 102-402 3-204 (206)
85 2gas_A Isoflavone reductase; N 99.9 1.4E-22 4.6E-27 208.8 20.3 238 102-426 2-240 (307)
86 3c1o_A Eugenol synthase; pheny 99.9 5.6E-23 1.9E-27 213.3 16.3 232 101-426 3-241 (321)
87 2r6j_A Eugenol synthase 1; phe 99.9 8.3E-23 2.8E-27 211.8 15.6 229 103-426 12-240 (318)
88 2bgk_A Rhizome secoisolaricire 99.9 8.1E-21 2.8E-25 192.8 20.3 241 99-419 13-276 (278)
89 2dkn_A 3-alpha-hydroxysteroid 99.9 7.6E-22 2.6E-26 197.3 9.9 240 103-411 2-252 (255)
90 3m1a_A Putative dehydrogenase; 99.8 1.4E-20 4.6E-25 191.8 18.2 239 101-419 4-265 (281)
91 1fmc_A 7 alpha-hydroxysteroid 99.8 2.6E-20 8.9E-25 186.5 16.5 226 100-409 9-254 (255)
92 3qvo_A NMRA family protein; st 99.8 8.1E-20 2.8E-24 181.2 17.3 200 101-402 22-224 (236)
93 1cyd_A Carbonyl reductase; sho 99.8 1.4E-19 4.8E-24 180.0 17.9 218 100-402 5-240 (244)
94 3r6d_A NAD-dependent epimerase 99.8 8E-20 2.8E-24 179.1 15.4 202 103-402 6-211 (221)
95 1w6u_A 2,4-dienoyl-COA reducta 99.8 9.9E-20 3.4E-24 187.2 16.4 243 99-422 23-287 (302)
96 3un1_A Probable oxidoreductase 99.8 4.4E-19 1.5E-23 178.8 18.2 207 100-402 26-254 (260)
97 3awd_A GOX2181, putative polyo 99.8 3.6E-19 1.2E-23 178.8 17.4 224 100-402 11-256 (260)
98 1spx_A Short-chain reductase f 99.8 1.1E-18 3.7E-23 177.4 20.4 246 100-419 4-276 (278)
99 2pd6_A Estradiol 17-beta-dehyd 99.8 8.5E-19 2.9E-23 176.5 19.3 232 100-411 5-261 (264)
100 3d3w_A L-xylulose reductase; u 99.8 7.1E-19 2.4E-23 175.0 18.1 218 100-402 5-240 (244)
101 2yut_A Putative short-chain ox 99.8 9.3E-20 3.2E-24 176.5 10.6 186 103-387 1-200 (207)
102 3afn_B Carbonyl reductase; alp 99.8 1.2E-18 4.1E-23 174.5 18.6 221 100-402 5-254 (258)
103 4e6p_A Probable sorbitol dehyd 99.8 1.7E-19 6E-24 181.5 11.7 225 100-402 6-255 (259)
104 1ja9_A 4HNR, 1,3,6,8-tetrahydr 99.8 6.2E-19 2.1E-23 178.4 15.7 229 100-402 19-272 (274)
105 1xq1_A Putative tropinone redu 99.8 8.8E-19 3E-23 176.7 16.7 220 100-402 12-254 (266)
106 2pnf_A 3-oxoacyl-[acyl-carrier 99.8 6.5E-19 2.2E-23 175.5 15.5 220 100-402 5-246 (248)
107 3d7l_A LIN1944 protein; APC893 99.8 2.4E-19 8.2E-24 173.1 12.0 184 103-399 4-201 (202)
108 1uay_A Type II 3-hydroxyacyl-C 99.8 8.1E-19 2.8E-23 174.1 15.1 205 102-402 2-236 (242)
109 1h5q_A NADP-dependent mannitol 99.8 2.8E-18 9.5E-23 172.7 18.9 228 100-402 12-261 (265)
110 3svt_A Short-chain type dehydr 99.8 7.6E-19 2.6E-23 179.0 14.6 245 99-423 8-275 (281)
111 1sby_A Alcohol dehydrogenase; 99.8 2.5E-18 8.5E-23 172.3 17.9 226 100-409 3-246 (254)
112 2wsb_A Galactitol dehydrogenas 99.8 2.2E-18 7.4E-23 172.5 17.2 221 100-402 9-250 (254)
113 3qiv_A Short-chain dehydrogena 99.8 1.8E-18 6.3E-23 173.1 16.6 217 100-402 7-248 (253)
114 2hq1_A Glucose/ribitol dehydro 99.8 2E-18 6.8E-23 172.0 16.8 220 100-402 3-244 (247)
115 3osu_A 3-oxoacyl-[acyl-carrier 99.8 4.8E-18 1.6E-22 169.6 18.6 219 101-402 3-243 (246)
116 1edo_A Beta-keto acyl carrier 99.8 1.9E-18 6.4E-23 171.8 15.1 219 102-402 1-241 (244)
117 1nff_A Putative oxidoreductase 99.8 8.4E-18 2.9E-22 169.3 19.8 211 100-402 5-237 (260)
118 2d1y_A Hypothetical protein TT 99.8 7.6E-18 2.6E-22 169.2 19.3 220 100-402 4-244 (256)
119 1gee_A Glucose 1-dehydrogenase 99.8 4.9E-18 1.7E-22 170.6 17.5 223 100-402 5-249 (261)
120 2q2v_A Beta-D-hydroxybutyrate 99.8 4.5E-18 1.5E-22 170.7 17.1 227 100-402 2-251 (255)
121 2wyu_A Enoyl-[acyl carrier pro 99.8 6.8E-18 2.3E-22 170.0 18.3 221 100-402 6-251 (261)
122 2ae2_A Protein (tropinone redu 99.8 4.9E-18 1.7E-22 170.9 17.2 223 100-402 7-253 (260)
123 3tzq_B Short-chain type dehydr 99.8 2.5E-17 8.6E-22 166.9 22.5 220 97-402 6-249 (271)
124 3ai3_A NADPH-sorbose reductase 99.8 1.4E-18 4.9E-23 175.1 13.2 231 100-402 5-258 (263)
125 3s55_A Putative short-chain de 99.8 9E-18 3.1E-22 171.0 19.2 237 100-402 8-275 (281)
126 3f9i_A 3-oxoacyl-[acyl-carrier 99.8 7.9E-18 2.7E-22 168.1 18.4 220 97-402 9-245 (249)
127 3gaf_A 7-alpha-hydroxysteroid 99.8 4.6E-18 1.6E-22 170.8 16.6 221 100-402 10-250 (256)
128 2o23_A HADH2 protein; HSD17B10 99.8 6.6E-18 2.3E-22 170.0 17.8 216 100-402 10-258 (265)
129 3ak4_A NADH-dependent quinucli 99.8 8.6E-18 2.9E-22 169.4 18.2 226 100-402 10-259 (263)
130 2bd0_A Sepiapterin reductase; 99.8 1.2E-17 4.2E-22 166.0 19.1 198 102-386 2-224 (244)
131 2ph3_A 3-oxoacyl-[acyl carrier 99.8 2.7E-18 9.1E-23 170.8 14.2 217 102-402 1-241 (245)
132 3v2h_A D-beta-hydroxybutyrate 99.8 1E-17 3.6E-22 170.6 18.7 234 100-402 23-277 (281)
133 1sny_A Sniffer CG10964-PA; alp 99.8 1.9E-17 6.7E-22 166.9 20.4 211 97-400 16-261 (267)
134 2cfc_A 2-(R)-hydroxypropyl-COM 99.8 6.9E-18 2.4E-22 168.4 16.9 221 102-402 2-246 (250)
135 1zk4_A R-specific alcohol dehy 99.8 6.1E-18 2.1E-22 168.9 16.0 220 100-402 4-247 (251)
136 3ctm_A Carbonyl reductase; alc 99.8 1.7E-17 5.9E-22 168.5 19.6 220 100-402 32-275 (279)
137 1mxh_A Pteridine reductase 2; 99.8 1.5E-17 5.2E-22 168.7 19.1 220 100-402 9-270 (276)
138 3pgx_A Carveol dehydrogenase; 99.8 2.9E-17 1E-21 167.1 21.3 234 99-402 12-276 (280)
139 3sx2_A Putative 3-ketoacyl-(ac 99.8 1.4E-17 4.8E-22 169.2 18.9 241 98-402 9-274 (278)
140 3tpc_A Short chain alcohol deh 99.8 1.3E-17 4.5E-22 167.5 18.3 215 100-402 5-251 (257)
141 3ijr_A Oxidoreductase, short c 99.8 1.1E-17 3.7E-22 171.4 17.8 223 99-402 44-286 (291)
142 3qlj_A Short chain dehydrogena 99.8 6.7E-18 2.3E-22 175.5 16.3 244 99-426 24-316 (322)
143 3rd5_A Mypaa.01249.C; ssgcid, 99.8 2.3E-17 7.7E-22 168.9 19.8 226 100-402 14-254 (291)
144 1hdc_A 3-alpha, 20 beta-hydrox 99.8 3.4E-17 1.2E-21 164.3 20.4 216 100-402 3-241 (254)
145 1wma_A Carbonyl reductase [NAD 99.8 5.5E-18 1.9E-22 171.1 14.5 226 101-386 3-257 (276)
146 1yo6_A Putative carbonyl reduc 99.8 7.5E-18 2.6E-22 167.7 15.3 208 101-400 2-244 (250)
147 2zat_A Dehydrogenase/reductase 99.8 3.9E-18 1.3E-22 171.6 13.2 226 100-408 12-259 (260)
148 3lyl_A 3-oxoacyl-(acyl-carrier 99.8 6.7E-18 2.3E-22 168.4 14.6 220 100-402 3-243 (247)
149 3pk0_A Short-chain dehydrogena 99.8 2.2E-17 7.6E-22 166.4 18.4 221 100-402 8-250 (262)
150 3i4f_A 3-oxoacyl-[acyl-carrier 99.8 1E-17 3.5E-22 168.8 15.9 221 101-402 6-250 (264)
151 3uf0_A Short-chain dehydrogena 99.8 1.1E-17 3.9E-22 169.6 16.3 221 100-402 29-269 (273)
152 1qsg_A Enoyl-[acyl-carrier-pro 99.7 1.4E-17 4.7E-22 168.1 16.5 221 100-402 7-253 (265)
153 2fwm_X 2,3-dihydro-2,3-dihydro 99.7 3.2E-17 1.1E-21 164.0 18.9 218 100-402 5-245 (250)
154 2c07_A 3-oxoacyl-(acyl-carrier 99.7 2.4E-17 8.3E-22 168.2 18.2 220 100-402 42-282 (285)
155 3o38_A Short chain dehydrogena 99.7 3.5E-17 1.2E-21 165.1 19.0 222 100-402 20-264 (266)
156 2p91_A Enoyl-[acyl-carrier-pro 99.7 3.4E-17 1.2E-21 167.0 19.1 221 100-402 19-265 (285)
157 1x1t_A D(-)-3-hydroxybutyrate 99.7 1.5E-17 5.3E-22 167.3 15.9 231 100-402 2-256 (260)
158 3ek2_A Enoyl-(acyl-carrier-pro 99.7 1.6E-17 5.4E-22 167.8 15.8 234 95-412 7-266 (271)
159 2rhc_B Actinorhodin polyketide 99.7 1.1E-17 3.8E-22 170.0 14.6 229 100-402 20-273 (277)
160 4e3z_A Putative oxidoreductase 99.7 2.6E-17 8.7E-22 166.8 17.0 222 100-402 24-271 (272)
161 3imf_A Short chain dehydrogena 99.7 5.9E-17 2E-21 162.8 19.4 224 99-402 3-249 (257)
162 3r3s_A Oxidoreductase; structu 99.7 4.2E-17 1.4E-21 167.3 18.6 221 100-402 47-290 (294)
163 3n74_A 3-ketoacyl-(acyl-carrie 99.7 2.8E-17 9.6E-22 165.3 17.0 221 100-402 7-253 (261)
164 3vtz_A Glucose 1-dehydrogenase 99.7 1.4E-17 4.9E-22 168.5 14.9 223 96-402 8-252 (269)
165 3ucx_A Short chain dehydrogena 99.7 1.7E-17 5.7E-22 167.5 15.3 233 96-402 5-260 (264)
166 1hxh_A 3BETA/17BETA-hydroxyste 99.7 4.1E-17 1.4E-21 163.5 17.7 220 100-402 4-247 (253)
167 3u9l_A 3-oxoacyl-[acyl-carrier 99.7 2.8E-17 9.7E-22 170.9 17.1 172 100-329 3-196 (324)
168 3pxx_A Carveol dehydrogenase; 99.7 2.5E-17 8.5E-22 168.0 16.3 245 100-402 8-282 (287)
169 4iin_A 3-ketoacyl-acyl carrier 99.7 3E-17 1E-21 166.3 16.7 221 100-402 27-268 (271)
170 2ew8_A (S)-1-phenylethanol deh 99.7 6.2E-17 2.1E-21 161.8 18.7 218 100-402 5-245 (249)
171 4dqx_A Probable oxidoreductase 99.7 6.9E-17 2.4E-21 164.2 19.2 223 100-402 25-268 (277)
172 4dmm_A 3-oxoacyl-[acyl-carrier 99.7 1.9E-17 6.4E-22 167.6 14.7 219 100-402 26-265 (269)
173 3a28_C L-2.3-butanediol dehydr 99.7 5.4E-17 1.9E-21 163.1 18.0 226 102-402 2-254 (258)
174 2z1n_A Dehydrogenase; reductas 99.7 3.7E-17 1.3E-21 164.4 16.8 231 100-402 5-257 (260)
175 3gem_A Short chain dehydrogena 99.7 6.9E-17 2.4E-21 162.7 18.7 211 100-402 25-254 (260)
176 2dtx_A Glucose 1-dehydrogenase 99.7 3.7E-17 1.3E-21 165.0 16.7 217 100-402 6-245 (264)
177 3grp_A 3-oxoacyl-(acyl carrier 99.7 3.1E-17 1.1E-21 165.8 16.1 217 100-402 25-262 (266)
178 3oid_A Enoyl-[acyl-carrier-pro 99.7 2.6E-17 9E-22 165.5 15.4 221 101-402 3-245 (258)
179 1yxm_A Pecra, peroxisomal tran 99.7 1.3E-16 4.3E-21 164.1 20.8 228 99-402 15-264 (303)
180 3ftp_A 3-oxoacyl-[acyl-carrier 99.7 1.7E-17 5.7E-22 168.1 14.0 225 95-402 21-266 (270)
181 1ae1_A Tropinone reductase-I; 99.7 6.5E-17 2.2E-21 164.0 18.3 226 100-402 19-266 (273)
182 2uvd_A 3-oxoacyl-(acyl-carrier 99.7 2.5E-17 8.7E-22 164.3 15.0 221 100-402 2-243 (246)
183 3gvc_A Oxidoreductase, probabl 99.7 1.2E-16 3.9E-21 162.6 20.0 225 99-402 26-271 (277)
184 3oig_A Enoyl-[acyl-carrier-pro 99.7 1.4E-16 4.9E-21 160.6 20.5 223 100-402 5-252 (266)
185 3ioy_A Short-chain dehydrogena 99.7 6.9E-17 2.4E-21 167.6 18.5 219 100-386 6-252 (319)
186 2gdz_A NAD+-dependent 15-hydro 99.7 6.3E-18 2.1E-22 170.8 10.3 235 100-412 5-258 (267)
187 1iy8_A Levodione reductase; ox 99.7 1.6E-16 5.6E-21 160.4 20.4 229 100-402 11-262 (267)
188 1o5i_A 3-oxoacyl-(acyl carrier 99.7 6.9E-17 2.4E-21 161.5 17.4 213 95-402 12-243 (249)
189 3tl3_A Short-chain type dehydr 99.7 8E-17 2.7E-21 161.7 17.8 213 100-402 7-251 (257)
190 3uxy_A Short-chain dehydrogena 99.7 5E-17 1.7E-21 164.2 16.3 215 100-402 26-262 (266)
191 3op4_A 3-oxoacyl-[acyl-carrier 99.7 1.2E-16 4.1E-21 159.6 18.9 217 100-402 7-244 (248)
192 3r1i_A Short-chain type dehydr 99.7 6.5E-17 2.2E-21 164.3 17.1 221 100-402 30-272 (276)
193 3cxt_A Dehydrogenase with diff 99.7 5.4E-17 1.8E-21 166.2 16.5 226 100-402 32-280 (291)
194 2ag5_A DHRS6, dehydrogenase/re 99.7 2.2E-17 7.6E-22 164.7 13.3 222 100-402 4-242 (246)
195 3rih_A Short chain dehydrogena 99.7 6.3E-17 2.2E-21 165.8 17.0 220 100-402 39-281 (293)
196 3ezl_A Acetoacetyl-COA reducta 99.7 6.5E-17 2.2E-21 162.1 16.8 225 96-402 7-252 (256)
197 4da9_A Short-chain dehydrogena 99.7 1.3E-16 4.3E-21 162.5 19.0 223 99-402 26-274 (280)
198 1g0o_A Trihydroxynaphthalene r 99.7 6.4E-17 2.2E-21 164.9 16.8 233 100-402 27-280 (283)
199 4eso_A Putative oxidoreductase 99.7 8.7E-17 3E-21 161.4 17.5 221 100-402 6-246 (255)
200 2a4k_A 3-oxoacyl-[acyl carrier 99.7 1.4E-16 4.9E-21 160.6 19.2 216 100-402 4-238 (263)
201 3rku_A Oxidoreductase YMR226C; 99.7 2.4E-16 8E-21 161.1 20.5 226 99-402 30-277 (287)
202 1vl8_A Gluconate 5-dehydrogena 99.7 7.7E-17 2.6E-21 162.9 16.6 227 96-402 15-263 (267)
203 2ehd_A Oxidoreductase, oxidore 99.7 9.4E-17 3.2E-21 158.6 16.9 188 102-386 5-214 (234)
204 4fc7_A Peroxisomal 2,4-dienoyl 99.7 3.1E-17 1E-21 166.8 13.6 230 99-409 24-274 (277)
205 3nrc_A Enoyl-[acyl-carrier-pro 99.7 1.8E-16 6.3E-21 161.3 19.3 221 99-402 23-270 (280)
206 1ooe_A Dihydropteridine reduct 99.7 1.6E-16 5.6E-21 157.3 18.4 202 101-402 2-227 (236)
207 4iiu_A 3-oxoacyl-[acyl-carrier 99.7 6.9E-17 2.4E-21 163.1 16.0 219 100-402 24-265 (267)
208 1geg_A Acetoin reductase; SDR 99.7 8.3E-17 2.8E-21 161.5 16.5 226 102-402 2-252 (256)
209 3sju_A Keto reductase; short-c 99.7 8E-17 2.7E-21 163.9 16.6 231 98-402 20-275 (279)
210 3dii_A Short-chain dehydrogena 99.7 1.1E-16 3.8E-21 159.8 17.3 208 102-402 2-228 (247)
211 3kzv_A Uncharacterized oxidore 99.7 3.3E-16 1.1E-20 157.0 20.6 223 102-402 2-247 (254)
212 3tox_A Short chain dehydrogena 99.7 6.7E-17 2.3E-21 164.6 15.7 224 100-402 6-252 (280)
213 4egf_A L-xylulose reductase; s 99.7 1.3E-16 4.5E-21 161.1 17.6 223 100-402 18-262 (266)
214 3tsc_A Putative oxidoreductase 99.7 2.2E-16 7.4E-21 160.4 19.3 238 97-402 6-273 (277)
215 1fjh_A 3alpha-hydroxysteroid d 99.7 2E-17 6.8E-22 165.8 11.4 234 103-402 2-247 (257)
216 3uve_A Carveol dehydrogenase ( 99.7 5.6E-16 1.9E-20 158.1 22.3 240 96-402 5-282 (286)
217 1yb1_A 17-beta-hydroxysteroid 99.7 3.6E-17 1.2E-21 165.7 13.3 196 100-386 29-248 (272)
218 2pd4_A Enoyl-[acyl-carrier-pro 99.7 2.5E-16 8.6E-21 159.8 19.5 221 100-402 4-249 (275)
219 3ksu_A 3-oxoacyl-acyl carrier 99.7 8.2E-17 2.8E-21 162.3 15.5 223 100-402 9-250 (262)
220 3p19_A BFPVVD8, putative blue 99.7 2E-16 6.8E-21 159.8 18.4 203 100-387 14-237 (266)
221 3h7a_A Short chain dehydrogena 99.7 1.4E-16 4.7E-21 159.7 17.0 206 100-387 5-231 (252)
222 1xhl_A Short-chain dehydrogena 99.7 6.5E-17 2.2E-21 166.1 15.0 235 100-412 24-287 (297)
223 1yde_A Retinal dehydrogenase/r 99.7 1.9E-16 6.5E-21 160.3 18.2 227 100-410 7-254 (270)
224 1xg5_A ARPG836; short chain de 99.7 1E-16 3.5E-21 162.9 16.2 209 100-386 30-264 (279)
225 3v2g_A 3-oxoacyl-[acyl-carrier 99.7 2.7E-16 9.4E-21 159.2 19.2 221 100-402 29-268 (271)
226 3tjr_A Short chain dehydrogena 99.7 1.5E-16 5.3E-21 163.6 17.5 216 100-386 29-266 (301)
227 1uzm_A 3-oxoacyl-[acyl-carrier 99.7 1.1E-16 3.7E-21 159.9 15.8 209 100-402 13-242 (247)
228 3grk_A Enoyl-(acyl-carrier-pro 99.7 3.4E-16 1.2E-20 160.4 19.9 222 99-402 28-274 (293)
229 4e4y_A Short chain dehydrogena 99.7 9.2E-17 3.2E-21 160.0 15.1 218 101-402 3-240 (244)
230 4ibo_A Gluconate dehydrogenase 99.7 4.8E-17 1.6E-21 164.8 13.2 222 100-402 24-266 (271)
231 3oec_A Carveol dehydrogenase ( 99.7 2.6E-16 9E-21 163.1 18.9 238 99-402 43-312 (317)
232 3gk3_A Acetoacetyl-COA reducta 99.7 6.4E-17 2.2E-21 163.6 13.9 223 99-402 22-265 (269)
233 3edm_A Short chain dehydrogena 99.7 2.8E-16 9.7E-21 158.0 18.5 222 100-402 6-247 (259)
234 1uls_A Putative 3-oxoacyl-acyl 99.7 9.5E-16 3.3E-20 152.8 21.9 214 100-402 3-237 (245)
235 3rwb_A TPLDH, pyridoxal 4-dehy 99.7 1.1E-16 3.7E-21 159.9 15.0 219 99-402 3-243 (247)
236 3l77_A Short-chain alcohol deh 99.7 2.2E-16 7.6E-21 156.1 17.1 199 101-387 1-217 (235)
237 3v8b_A Putative dehydrogenase, 99.7 2.9E-16 9.8E-21 160.1 18.4 228 100-402 26-278 (283)
238 1xkq_A Short-chain reductase f 99.7 1.7E-16 5.8E-21 161.5 16.4 227 100-402 4-261 (280)
239 3t7c_A Carveol dehydrogenase; 99.7 1.2E-15 4E-20 156.8 22.6 241 95-402 21-295 (299)
240 3rkr_A Short chain oxidoreduct 99.7 1.9E-16 6.6E-21 159.5 16.4 199 100-387 27-247 (262)
241 3k31_A Enoyl-(acyl-carrier-pro 99.7 5.9E-16 2E-20 158.8 19.8 222 99-402 27-273 (296)
242 3t4x_A Oxidoreductase, short c 99.7 3.4E-16 1.2E-20 158.1 17.6 235 100-402 8-261 (267)
243 3u5t_A 3-oxoacyl-[acyl-carrier 99.7 2.9E-16 9.9E-21 158.7 17.1 222 100-402 25-265 (267)
244 1dhr_A Dihydropteridine reduct 99.7 5.5E-16 1.9E-20 154.1 18.7 202 100-402 5-230 (241)
245 2b4q_A Rhamnolipids biosynthes 99.7 1.7E-16 5.9E-21 161.2 15.2 221 100-402 27-273 (276)
246 3orf_A Dihydropteridine reduct 99.7 2.6E-16 8.8E-21 157.5 16.1 198 102-402 22-242 (251)
247 3ppi_A 3-hydroxyacyl-COA dehyd 99.7 1.5E-16 5.2E-21 161.8 14.7 217 99-402 27-275 (281)
248 3f1l_A Uncharacterized oxidore 99.7 7.2E-16 2.5E-20 154.3 18.9 215 98-402 8-245 (252)
249 2nm0_A Probable 3-oxacyl-(acyl 99.7 1.8E-16 6.1E-21 159.0 14.2 209 100-402 19-248 (253)
250 2ekp_A 2-deoxy-D-gluconate 3-d 99.7 2.2E-16 7.6E-21 156.7 14.7 213 102-402 2-235 (239)
251 4imr_A 3-oxoacyl-(acyl-carrier 99.7 6.5E-16 2.2E-20 156.8 18.4 224 100-402 31-274 (275)
252 1xu9_A Corticosteroid 11-beta- 99.7 3.6E-16 1.2E-20 159.5 16.5 200 99-386 25-246 (286)
253 3asu_A Short-chain dehydrogena 99.7 1.2E-15 4E-20 152.5 19.4 213 103-402 1-236 (248)
254 3is3_A 17BETA-hydroxysteroid d 99.7 2.2E-16 7.6E-21 159.7 14.4 233 98-402 14-268 (270)
255 4dyv_A Short-chain dehydrogena 99.7 4.5E-16 1.5E-20 157.8 16.5 203 100-387 26-252 (272)
256 3lf2_A Short chain oxidoreduct 99.7 1.1E-15 3.7E-20 154.2 19.0 233 100-402 6-260 (265)
257 3icc_A Putative 3-oxoacyl-(acy 99.7 2E-15 6.9E-20 151.0 20.5 223 100-402 5-252 (255)
258 2fr1_A Erythromycin synthase, 99.7 7.1E-16 2.4E-20 168.8 18.6 227 98-418 222-461 (486)
259 3l6e_A Oxidoreductase, short-c 99.7 1.2E-15 3.9E-20 151.3 17.7 193 101-386 2-214 (235)
260 2z5l_A Tylkr1, tylactone synth 99.7 1.2E-15 4.1E-20 167.8 19.4 226 99-418 256-491 (511)
261 3uce_A Dehydrogenase; rossmann 99.7 6.9E-16 2.4E-20 151.5 15.7 202 100-402 4-219 (223)
262 3e9n_A Putative short-chain de 99.7 1.2E-16 4E-21 159.2 9.9 207 100-400 3-226 (245)
263 3guy_A Short-chain dehydrogena 99.7 1.4E-15 4.9E-20 149.9 17.3 192 103-386 2-210 (230)
264 2x9g_A PTR1, pteridine reducta 99.7 7.9E-16 2.7E-20 157.2 15.1 224 100-402 21-282 (288)
265 3tfo_A Putative 3-oxoacyl-(acy 99.6 1.3E-15 4.4E-20 153.7 15.5 206 100-387 2-226 (264)
266 4dry_A 3-oxoacyl-[acyl-carrier 99.6 1.1E-15 3.9E-20 155.5 15.2 207 100-387 31-261 (281)
267 2jah_A Clavulanic acid dehydro 99.6 9.7E-16 3.3E-20 152.9 14.2 207 99-386 4-231 (247)
268 3gdg_A Probable NADP-dependent 99.6 1.1E-15 3.8E-20 154.1 14.7 224 100-402 18-263 (267)
269 3sc4_A Short chain dehydrogena 99.6 2.5E-15 8.4E-20 153.3 17.0 214 100-401 7-247 (285)
270 3o26_A Salutaridine reductase; 99.6 5.2E-15 1.8E-19 152.1 19.2 205 99-329 9-270 (311)
271 2qhx_A Pteridine reductase 1; 99.6 3.1E-15 1.1E-19 155.8 17.3 225 100-402 44-322 (328)
272 3i1j_A Oxidoreductase, short c 99.6 3.8E-15 1.3E-19 148.3 16.6 212 98-399 10-246 (247)
273 1zem_A Xylitol dehydrogenase; 99.6 2.2E-15 7.5E-20 151.7 14.9 167 100-329 5-193 (262)
274 3nyw_A Putative oxidoreductase 99.6 1.7E-15 6E-20 151.4 13.6 202 100-387 5-226 (250)
275 3zv4_A CIS-2,3-dihydrobiphenyl 99.6 5.5E-15 1.9E-19 150.4 16.4 227 100-402 3-254 (281)
276 3kvo_A Hydroxysteroid dehydrog 99.6 2E-14 6.7E-19 150.6 20.4 212 99-397 42-278 (346)
277 3e03_A Short chain dehydrogena 99.6 1.1E-14 3.9E-19 147.5 18.0 206 100-386 4-231 (274)
278 1jtv_A 17 beta-hydroxysteroid 99.6 2.5E-15 8.7E-20 156.3 13.4 172 101-330 1-192 (327)
279 2nwq_A Probable short-chain de 99.6 7.1E-15 2.4E-19 148.9 16.2 218 99-402 19-259 (272)
280 1y7t_A Malate dehydrogenase; N 99.6 3.9E-16 1.3E-20 162.5 5.5 179 102-332 4-189 (327)
281 3u0b_A Oxidoreductase, short c 99.6 1.3E-14 4.5E-19 157.4 17.4 219 98-402 209-449 (454)
282 1e7w_A Pteridine reductase; di 99.6 1.4E-14 4.9E-19 148.1 16.6 226 100-402 7-285 (291)
283 1oaa_A Sepiapterin reductase; 99.6 1.2E-14 4E-19 146.0 15.5 167 100-327 4-201 (259)
284 1zmt_A Haloalcohol dehalogenas 99.6 7.4E-15 2.5E-19 147.1 13.2 217 103-402 2-242 (254)
285 2qq5_A DHRS1, dehydrogenase/re 99.6 9E-15 3.1E-19 147.0 11.8 167 100-330 3-198 (260)
286 4b79_A PA4098, probable short- 99.6 5.7E-14 1.9E-18 138.8 17.0 218 98-402 7-238 (242)
287 2h7i_A Enoyl-[acyl-carrier-pro 99.6 3.3E-14 1.1E-18 143.6 15.4 224 100-402 5-263 (269)
288 1gz6_A Estradiol 17 beta-dehyd 99.5 2.6E-14 8.8E-19 148.2 13.4 211 100-402 7-242 (319)
289 3mje_A AMPHB; rossmann fold, o 99.5 5.5E-14 1.9E-18 153.5 15.2 168 102-329 239-420 (496)
290 4gkb_A 3-oxoacyl-[acyl-carrier 99.5 3E-13 1E-17 135.4 18.8 226 100-402 5-249 (258)
291 1zmo_A Halohydrin dehalogenase 99.5 7.6E-14 2.6E-18 138.8 13.7 218 102-402 1-241 (244)
292 4fn4_A Short chain dehydrogena 99.5 1E-12 3.5E-17 131.0 20.5 224 100-402 5-250 (254)
293 3ged_A Short-chain dehydrogena 99.5 1E-12 3.6E-17 130.4 20.4 208 102-402 2-228 (247)
294 4fgs_A Probable dehydrogenase 99.5 4.4E-13 1.5E-17 135.0 16.1 228 95-402 22-269 (273)
295 3qp9_A Type I polyketide synth 99.5 2.7E-13 9.2E-18 149.6 15.5 228 98-419 247-503 (525)
296 4g81_D Putative hexonate dehyd 99.5 3.6E-13 1.2E-17 134.4 14.4 222 100-402 7-250 (255)
297 4hp8_A 2-deoxy-D-gluconate 3-d 99.5 9.6E-13 3.3E-17 130.3 16.4 220 100-402 7-243 (247)
298 4fs3_A Enoyl-[acyl-carrier-pro 99.4 3.6E-12 1.2E-16 127.8 20.1 223 100-402 4-251 (256)
299 1d7o_A Enoyl-[acyl-carrier pro 99.4 1.3E-11 4.6E-16 126.2 19.5 240 100-402 6-284 (297)
300 4h15_A Short chain alcohol deh 99.4 2.8E-12 9.4E-17 128.8 13.3 220 100-402 9-256 (261)
301 3oml_A GH14720P, peroxisomal m 99.4 1.8E-12 6.3E-17 145.8 12.9 210 98-402 15-252 (613)
302 2ptg_A Enoyl-acyl carrier redu 99.2 8.2E-11 2.8E-15 121.7 14.8 248 100-402 7-304 (319)
303 2uv9_A Fatty acid synthase alp 99.2 5.8E-10 2E-14 135.4 21.9 168 100-327 650-848 (1878)
304 2o2s_A Enoyl-acyl carrier redu 99.2 5.7E-11 1.9E-15 122.7 10.8 245 100-402 7-291 (315)
305 3slk_A Polyketide synthase ext 99.2 7.2E-11 2.5E-15 136.4 12.7 166 99-327 527-707 (795)
306 2uv8_A Fatty acid synthase sub 99.1 6.4E-10 2.2E-14 135.3 16.6 168 100-328 673-874 (1887)
307 2pff_A Fatty acid synthase sub 99.1 1.6E-10 5.4E-15 136.2 10.8 167 100-328 474-675 (1688)
308 3lt0_A Enoyl-ACP reductase; tr 99.1 6.8E-10 2.3E-14 115.3 13.8 184 101-329 1-223 (329)
309 3zu3_A Putative reductase YPO4 99.0 7.1E-09 2.4E-13 108.7 17.2 172 100-329 45-283 (405)
310 3s8m_A Enoyl-ACP reductase; ro 98.9 1E-08 3.6E-13 108.4 15.5 171 101-329 60-297 (422)
311 2et6_A (3R)-hydroxyacyl-COA de 98.9 5.9E-09 2E-13 116.9 12.7 209 99-402 319-545 (604)
312 4eue_A Putative reductase CA_C 98.9 1.9E-08 6.6E-13 107.0 15.9 171 100-329 58-297 (418)
313 2et6_A (3R)-hydroxyacyl-COA de 98.8 1.6E-08 5.4E-13 113.3 12.4 166 100-324 6-194 (604)
314 2vz8_A Fatty acid synthase; tr 98.8 1.5E-08 5.1E-13 129.6 13.3 170 99-328 1881-2065(2512)
315 1b8p_A Protein (malate dehydro 98.6 3.5E-08 1.2E-12 102.3 6.2 187 102-339 5-200 (329)
316 3ic5_A Putative saccharopine d 98.6 1.2E-07 4E-12 82.1 8.5 94 102-242 5-98 (118)
317 1hye_A L-lactate/malate dehydr 98.5 1E-07 3.5E-12 98.0 8.1 122 103-247 1-123 (313)
318 1smk_A Malate dehydrogenase, g 98.5 1.6E-07 5.6E-12 97.0 9.3 118 102-247 8-126 (326)
319 1o6z_A MDH, malate dehydrogena 98.4 1.1E-06 3.8E-11 89.8 10.6 119 103-247 1-120 (303)
320 3zen_D Fatty acid synthase; tr 98.3 5.3E-06 1.8E-10 106.4 15.1 172 99-329 2133-2343(3089)
321 1ff9_A Saccharopine reductase; 98.1 6.7E-06 2.3E-10 88.7 10.7 108 101-239 2-118 (450)
322 1lu9_A Methylene tetrahydromet 98.1 1.8E-06 6E-11 87.6 3.7 82 100-207 117-198 (287)
323 2hmt_A YUAA protein; RCK, KTN, 97.9 4.6E-05 1.6E-09 67.9 9.3 101 101-247 5-106 (144)
324 2gk4_A Conserved hypothetical 97.8 2.7E-05 9.1E-10 75.7 7.1 81 101-211 2-98 (232)
325 1mld_A Malate dehydrogenase; o 97.8 0.00017 5.9E-09 73.8 12.5 114 103-244 1-116 (314)
326 5mdh_A Malate dehydrogenase; o 97.7 1.1E-05 3.7E-10 83.4 2.1 119 102-245 3-129 (333)
327 4ggo_A Trans-2-enoyl-COA reduc 97.6 0.001 3.5E-08 69.2 15.7 87 100-208 48-151 (401)
328 3llv_A Exopolyphosphatase-rela 97.6 0.00029 1E-08 62.8 10.2 74 101-206 5-79 (141)
329 1lss_A TRK system potassium up 97.6 0.0002 6.8E-09 63.3 8.7 96 102-243 4-100 (140)
330 2axq_A Saccharopine dehydrogen 97.6 0.00025 8.5E-09 76.6 11.0 112 96-238 17-137 (467)
331 1u7z_A Coenzyme A biosynthesis 97.5 0.0002 6.7E-09 69.4 7.3 37 100-139 6-58 (226)
332 4ina_A Saccharopine dehydrogen 97.4 0.00019 6.6E-09 76.2 7.6 98 103-239 2-102 (405)
333 1dih_A Dihydrodipicolinate red 97.3 0.00016 5.3E-09 72.6 4.9 36 101-138 4-40 (273)
334 3abi_A Putative uncharacterize 97.2 0.00061 2.1E-08 71.2 8.0 94 102-248 16-109 (365)
335 1id1_A Putative potassium chan 97.2 0.0007 2.4E-08 61.3 7.3 78 101-206 2-80 (153)
336 3fi9_A Malate dehydrogenase; s 97.1 0.00033 1.1E-08 72.4 4.8 115 98-240 4-119 (343)
337 2g1u_A Hypothetical protein TM 97.0 0.0016 5.3E-08 59.1 7.9 80 97-207 14-94 (155)
338 3c85_A Putative glutathione-re 96.8 0.0048 1.7E-07 57.4 10.1 76 100-207 37-115 (183)
339 1pqw_A Polyketide synthase; ro 96.4 0.0049 1.7E-07 58.0 6.9 35 101-138 38-72 (198)
340 3hhp_A Malate dehydrogenase; M 96.2 0.042 1.4E-06 55.8 12.6 117 103-246 1-118 (312)
341 3l4b_C TRKA K+ channel protien 96.1 0.0094 3.2E-07 57.1 7.0 73 103-206 1-74 (218)
342 3fwz_A Inner membrane protein 96.0 0.014 4.7E-07 51.8 7.3 72 103-206 8-80 (140)
343 3tnl_A Shikimate dehydrogenase 96.0 0.013 4.3E-07 59.8 7.6 85 100-207 152-236 (315)
344 1p9o_A Phosphopantothenoylcyst 95.8 0.017 5.9E-07 58.4 7.7 38 100-140 34-90 (313)
345 3pqe_A L-LDH, L-lactate dehydr 95.6 0.11 3.9E-06 52.9 13.3 117 102-246 5-122 (326)
346 1jay_A Coenzyme F420H2:NADP+ o 95.6 0.0047 1.6E-07 58.8 2.6 34 103-139 1-34 (212)
347 2z2v_A Hypothetical protein PH 95.6 0.013 4.6E-07 61.0 6.2 72 101-206 15-86 (365)
348 1jw9_B Molybdopterin biosynthe 95.5 0.028 9.6E-07 55.2 7.9 115 99-247 28-155 (249)
349 1zud_1 Adenylyltransferase THI 95.4 0.037 1.3E-06 54.4 8.3 115 99-247 25-152 (251)
350 3vku_A L-LDH, L-lactate dehydr 95.3 0.069 2.4E-06 54.5 10.1 117 101-246 8-125 (326)
351 4h7p_A Malate dehydrogenase; s 95.2 0.15 5E-06 52.5 12.4 117 100-244 22-148 (345)
352 1wly_A CAAR, 2-haloacrylate re 95.2 0.037 1.3E-06 56.6 7.9 37 100-139 144-180 (333)
353 1v3u_A Leukotriene B4 12- hydr 95.1 0.048 1.6E-06 55.7 8.4 37 99-138 143-179 (333)
354 1qor_A Quinone oxidoreductase; 95.1 0.035 1.2E-06 56.6 7.3 36 100-138 139-174 (327)
355 2hcy_A Alcohol dehydrogenase 1 95.1 0.024 8.1E-07 58.5 6.0 37 100-139 168-204 (347)
356 2eez_A Alanine dehydrogenase; 95.0 0.018 6E-07 60.1 4.9 77 100-208 164-240 (369)
357 2nqt_A N-acetyl-gamma-glutamyl 94.9 0.037 1.3E-06 57.2 7.0 37 101-138 8-48 (352)
358 2hjs_A USG-1 protein homolog; 94.9 0.019 6.4E-07 59.3 4.6 34 103-136 7-40 (340)
359 3h8v_A Ubiquitin-like modifier 94.8 0.13 4.6E-06 51.5 10.6 120 98-247 32-171 (292)
360 1y6j_A L-lactate dehydrogenase 94.6 0.12 4.1E-06 52.6 9.8 117 102-247 7-124 (318)
361 2j8z_A Quinone oxidoreductase; 94.4 0.058 2E-06 55.7 6.9 38 99-139 160-197 (354)
362 3t4e_A Quinate/shikimate dehyd 94.4 0.056 1.9E-06 54.9 6.5 38 100-140 146-183 (312)
363 1yb5_A Quinone oxidoreductase; 94.2 0.06 2.1E-06 55.6 6.7 37 100-139 169-205 (351)
364 4f3y_A DHPR, dihydrodipicolina 94.1 0.021 7.1E-07 56.9 2.8 38 101-139 6-43 (272)
365 2zb4_A Prostaglandin reductase 94.1 0.11 3.8E-06 53.6 8.4 37 100-138 157-195 (357)
366 2j3h_A NADP-dependent oxidored 94.1 0.056 1.9E-06 55.5 6.0 37 99-138 153-189 (345)
367 2eih_A Alcohol dehydrogenase; 94.0 0.1 3.4E-06 53.6 7.7 37 100-139 165-201 (343)
368 4eye_A Probable oxidoreductase 94.0 0.065 2.2E-06 55.0 6.3 38 100-140 158-195 (342)
369 3h5n_A MCCB protein; ubiquitin 94.0 0.15 5.1E-06 52.7 9.0 123 97-247 113-243 (353)
370 1oju_A MDH, malate dehydrogena 93.9 0.095 3.3E-06 52.7 7.2 115 103-246 1-118 (294)
371 7mdh_A Protein (malate dehydro 93.9 0.13 4.6E-06 53.3 8.4 118 101-246 31-158 (375)
372 3nep_X Malate dehydrogenase; h 93.9 0.36 1.2E-05 48.9 11.4 116 103-246 1-118 (314)
373 2aef_A Calcium-gated potassium 93.8 0.036 1.2E-06 53.6 3.8 71 102-206 9-80 (234)
374 3l9w_A Glutathione-regulated p 93.8 0.16 5.3E-06 53.7 9.0 73 102-206 4-77 (413)
375 2ph5_A Homospermidine synthase 93.7 0.11 3.9E-06 55.3 7.5 101 102-248 13-115 (480)
376 4b7c_A Probable oxidoreductase 93.6 0.063 2.2E-06 54.9 5.3 38 99-139 147-184 (336)
377 3jyo_A Quinate/shikimate dehyd 93.5 0.062 2.1E-06 53.8 5.0 37 100-139 125-161 (283)
378 4dup_A Quinone oxidoreductase; 93.4 0.12 4.2E-06 53.2 7.3 37 100-139 166-202 (353)
379 3gms_A Putative NADPH:quinone 93.4 0.19 6.3E-06 51.5 8.4 40 99-141 142-181 (340)
380 2ozp_A N-acetyl-gamma-glutamyl 93.3 0.044 1.5E-06 56.6 3.4 35 102-138 4-38 (345)
381 1ur5_A Malate dehydrogenase; o 93.2 0.39 1.3E-05 48.5 10.5 117 103-247 3-120 (309)
382 1pzg_A LDH, lactate dehydrogen 93.2 0.35 1.2E-05 49.4 10.1 118 102-247 9-133 (331)
383 3rg2_A Enterobactin synthase c 93.2 0.044 1.5E-06 61.1 3.6 85 3-89 515-609 (617)
384 4dg8_A PA1221; ANL superfamily 93.1 0.016 5.4E-07 64.9 -0.1 85 3-88 494-588 (620)
385 1xyg_A Putative N-acetyl-gamma 93.0 0.071 2.4E-06 55.3 4.6 37 100-138 14-50 (359)
386 2x0j_A Malate dehydrogenase; o 92.9 0.51 1.7E-05 47.3 10.7 116 103-246 1-118 (294)
387 1nyt_A Shikimate 5-dehydrogena 92.9 0.12 4.1E-06 51.3 6.0 36 100-139 117-152 (271)
388 2cdc_A Glucose dehydrogenase g 92.9 0.21 7.1E-06 51.7 8.1 36 100-139 179-214 (366)
389 3p7m_A Malate dehydrogenase; p 92.9 0.72 2.5E-05 46.8 11.9 116 101-244 4-120 (321)
390 3jyn_A Quinone oxidoreductase; 92.9 0.15 5E-06 51.9 6.8 38 99-139 138-175 (325)
391 3tl2_A Malate dehydrogenase; c 92.8 0.6 2E-05 47.3 11.1 118 101-244 7-125 (315)
392 2zqz_A L-LDH, L-lactate dehydr 92.7 0.87 3E-05 46.3 12.2 114 102-244 9-123 (326)
393 3d0o_A L-LDH 1, L-lactate dehy 92.6 1.4 4.7E-05 44.6 13.5 118 101-247 5-124 (317)
394 3qwb_A Probable quinone oxidor 92.5 0.26 8.8E-06 50.2 8.0 36 100-138 147-182 (334)
395 3dr3_A N-acetyl-gamma-glutamyl 92.5 0.096 3.3E-06 53.7 4.7 36 102-139 4-39 (337)
396 1ez4_A Lactate dehydrogenase; 92.4 0.72 2.4E-05 46.8 11.1 114 102-244 5-119 (318)
397 2r00_A Aspartate-semialdehyde 92.2 0.22 7.6E-06 51.0 7.1 35 102-137 3-38 (336)
398 2c0c_A Zinc binding alcohol de 92.2 0.17 5.8E-06 52.3 6.3 36 100-138 162-197 (362)
399 3gvi_A Malate dehydrogenase; N 92.1 0.89 3E-05 46.2 11.3 117 100-244 5-122 (324)
400 1ys4_A Aspartate-semialdehyde 92.1 0.082 2.8E-06 54.7 3.6 34 103-138 9-42 (354)
401 1vkn_A N-acetyl-gamma-glutamyl 92.1 0.16 5.5E-06 52.2 5.8 33 102-136 13-45 (351)
402 2vsq_A Surfactin synthetase su 92.1 0.1 3.5E-06 63.5 5.0 81 3-87 941-1034(1304)
403 1jvb_A NAD(H)-dependent alcoho 92.0 0.25 8.4E-06 50.7 7.1 37 100-139 169-206 (347)
404 2xxj_A L-LDH, L-lactate dehydr 92.0 0.96 3.3E-05 45.7 11.4 113 103-244 1-114 (310)
405 3pwk_A Aspartate-semialdehyde 91.6 0.21 7.1E-06 51.8 6.1 36 102-137 2-37 (366)
406 4g65_A TRK system potassium up 91.6 0.26 8.8E-06 52.9 6.9 71 101-202 2-73 (461)
407 3oj0_A Glutr, glutamyl-tRNA re 91.5 0.11 3.7E-06 46.0 3.3 34 102-139 21-54 (144)
408 3vh1_A Ubiquitin-like modifier 91.5 0.27 9.3E-06 53.9 7.0 98 99-207 324-442 (598)
409 2o7s_A DHQ-SDH PR, bifunctiona 91.5 0.16 5.6E-06 55.3 5.3 35 100-138 362-396 (523)
410 2vns_A Metalloreductase steap3 91.4 0.39 1.3E-05 45.6 7.4 33 102-138 28-60 (215)
411 3gxh_A Putative phosphatase (D 91.2 0.49 1.7E-05 42.6 7.5 74 111-208 25-108 (157)
412 3pi7_A NADH oxidoreductase; gr 91.2 0.38 1.3E-05 49.3 7.6 36 102-140 165-200 (349)
413 1y8q_A Ubiquitin-like 1 activa 91.1 0.32 1.1E-05 50.1 6.8 114 99-247 33-159 (346)
414 3don_A Shikimate dehydrogenase 91.0 0.14 4.8E-06 51.0 3.9 38 100-140 115-152 (277)
415 4aj2_A L-lactate dehydrogenase 91.0 0.83 2.8E-05 46.6 9.8 119 100-246 17-136 (331)
416 2i6t_A Ubiquitin-conjugating e 91.0 1.5 5.1E-05 44.0 11.6 108 102-242 14-121 (303)
417 1t4b_A Aspartate-semialdehyde 91.0 0.27 9.2E-06 51.0 6.1 39 103-141 2-41 (367)
418 1rjw_A ADH-HT, alcohol dehydro 90.8 0.37 1.3E-05 49.2 7.0 35 100-138 163-197 (339)
419 2egg_A AROE, shikimate 5-dehyd 90.8 0.62 2.1E-05 46.7 8.6 37 100-139 139-175 (297)
420 1pjc_A Protein (L-alanine dehy 90.8 0.32 1.1E-05 50.3 6.6 77 100-208 165-241 (361)
421 3tz6_A Aspartate-semialdehyde 90.8 0.35 1.2E-05 49.6 6.7 35 102-136 1-35 (344)
422 3rui_A Ubiquitin-like modifier 90.7 0.42 1.4E-05 48.8 7.1 98 99-207 31-149 (340)
423 1iz0_A Quinone oxidoreductase; 90.4 0.17 5.8E-06 50.8 3.9 38 100-140 124-161 (302)
424 2cq8_A 10-formyltetrahydrofola 90.3 0.11 3.7E-06 44.0 1.9 43 46-88 44-90 (110)
425 2vn8_A Reticulon-4-interacting 89.7 0.49 1.7E-05 49.1 6.9 36 99-137 181-216 (375)
426 4gsl_A Ubiquitin-like modifier 89.7 0.5 1.7E-05 51.9 7.1 103 99-207 323-441 (615)
427 3p2o_A Bifunctional protein fo 89.7 0.55 1.9E-05 46.6 6.8 35 100-137 158-192 (285)
428 3uw3_A Aspartate-semialdehyde 89.6 0.72 2.5E-05 47.9 7.9 36 102-137 4-40 (377)
429 3tqh_A Quinone oxidoreductase; 89.6 0.4 1.4E-05 48.5 6.0 37 99-138 150-186 (321)
430 1y8q_B Anthracycline-, ubiquit 89.5 0.39 1.3E-05 53.3 6.0 122 98-247 13-142 (640)
431 3ldh_A Lactate dehydrogenase; 89.4 1.9 6.7E-05 43.7 10.9 118 101-246 20-138 (330)
432 3gaz_A Alcohol dehydrogenase s 89.3 0.43 1.5E-05 48.8 6.0 33 100-135 149-181 (343)
433 2v6b_A L-LDH, L-lactate dehydr 89.2 1.2 4.1E-05 44.8 9.1 113 103-244 1-114 (304)
434 1ldn_A L-lactate dehydrogenase 88.8 1.1 3.6E-05 45.5 8.4 115 102-244 6-121 (316)
435 1gu7_A Enoyl-[acyl-carrier-pro 88.7 0.47 1.6E-05 48.8 5.8 38 100-140 165-203 (364)
436 3fbg_A Putative arginate lyase 88.6 0.23 8E-06 50.9 3.4 35 101-138 150-184 (346)
437 1or5_A Acyl carrier protein; A 88.5 0.13 4.5E-06 40.8 1.1 35 55-89 39-73 (83)
438 2d8a_A PH0655, probable L-thre 88.5 0.64 2.2E-05 47.6 6.6 35 101-138 167-201 (348)
439 3ijp_A DHPR, dihydrodipicolina 88.2 0.19 6.3E-06 50.3 2.2 37 102-139 21-57 (288)
440 3pzr_A Aspartate-semialdehyde 88.0 0.63 2.2E-05 48.2 6.1 34 103-136 1-35 (370)
441 4i4d_A Peptide synthetase NRPS 87.8 0.16 5.4E-06 41.4 1.2 34 55-88 46-79 (93)
442 4a26_A Putative C-1-tetrahydro 87.6 0.97 3.3E-05 45.2 7.0 35 100-137 163-197 (300)
443 3l07_A Bifunctional protein fo 87.5 0.95 3.2E-05 44.9 6.8 35 100-137 159-193 (285)
444 1guz_A Malate dehydrogenase; o 87.4 2.9 9.9E-05 42.0 10.7 113 103-242 1-114 (310)
445 1piw_A Hypothetical zinc-type 87.3 0.94 3.2E-05 46.6 7.1 38 100-141 178-215 (360)
446 1hyh_A L-hicdh, L-2-hydroxyiso 87.1 3.6 0.00012 41.2 11.2 114 103-244 2-120 (309)
447 4a5o_A Bifunctional protein fo 87.0 0.98 3.4E-05 44.8 6.6 34 100-136 159-192 (286)
448 1dny_A Non-ribosomal peptide s 87.0 0.23 7.7E-06 40.4 1.7 34 55-88 44-77 (91)
449 2afd_A Protein ASL1650; twiste 87.0 1.2 4E-05 35.3 6.0 42 47-88 37-79 (88)
450 1a5z_A L-lactate dehydrogenase 86.9 2 6.7E-05 43.5 9.1 112 103-243 1-113 (319)
451 1xa0_A Putative NADPH dependen 86.8 1.1 3.9E-05 45.2 7.3 37 102-141 149-186 (328)
452 1p9l_A Dihydrodipicolinate red 86.8 0.96 3.3E-05 44.0 6.4 33 103-137 1-33 (245)
453 1lnq_A MTHK channels, potassiu 86.8 0.32 1.1E-05 49.6 3.1 71 102-206 115-186 (336)
454 3ngx_A Bifunctional protein fo 86.7 0.95 3.3E-05 44.6 6.2 35 100-137 148-182 (276)
455 2vhw_A Alanine dehydrogenase; 86.6 0.49 1.7E-05 49.3 4.4 76 100-207 166-241 (377)
456 1oi7_A Succinyl-COA synthetase 86.4 2.6 8.8E-05 42.0 9.4 35 101-137 6-40 (288)
457 4a0s_A Octenoyl-COA reductase/ 86.0 0.83 2.9E-05 48.5 6.0 38 98-138 217-254 (447)
458 2kr5_A PKS, aflatoxin biosynth 86.0 1.4 4.9E-05 35.0 6.0 44 45-88 32-78 (89)
459 1yqd_A Sinapyl alcohol dehydro 85.8 0.72 2.5E-05 47.6 5.2 76 101-208 187-262 (366)
460 2ju1_A Erythronolide synthase; 85.7 0.94 3.2E-05 36.6 4.9 43 45-87 42-85 (95)
461 2ju1_A Erythronolide synthase; 85.1 0.26 8.7E-06 40.1 1.1 48 24-71 42-95 (95)
462 2b5w_A Glucose dehydrogenase; 84.8 1.7 6E-05 44.4 7.6 36 102-140 173-210 (357)
463 2nu8_A Succinyl-COA ligase [AD 84.8 3.3 0.00011 41.2 9.3 36 101-139 6-41 (288)
464 3krt_A Crotonyl COA reductase; 84.7 1.8 6.2E-05 46.0 7.9 37 99-138 226-262 (456)
465 4dll_A 2-hydroxy-3-oxopropiona 84.6 3.7 0.00013 41.3 9.8 35 101-139 30-64 (320)
466 3qy9_A DHPR, dihydrodipicolina 84.5 0.86 2.9E-05 44.3 4.7 35 102-139 3-37 (243)
467 3u62_A Shikimate dehydrogenase 84.4 2 6.8E-05 41.9 7.4 36 100-139 107-142 (253)
468 1lld_A L-lactate dehydrogenase 84.2 2.4 8.4E-05 42.5 8.2 113 102-243 7-121 (319)
469 2pv7_A T-protein [includes: ch 83.9 1.7 5.9E-05 43.4 6.9 34 102-138 21-54 (298)
470 2hjr_A Malate dehydrogenase; m 83.7 2.5 8.7E-05 42.9 8.1 111 103-242 15-127 (328)
471 2d4a_B Malate dehydrogenase; a 83.5 2.6 8.9E-05 42.4 8.0 111 104-242 1-112 (308)
472 4e4t_A Phosphoribosylaminoimid 83.4 1.3 4.3E-05 46.8 5.8 74 95-202 28-101 (419)
473 4dpk_A Malonyl-COA/succinyl-CO 83.3 0.97 3.3E-05 46.6 4.8 39 102-142 7-46 (359)
474 4dpl_A Malonyl-COA/succinyl-CO 83.3 0.97 3.3E-05 46.6 4.8 39 102-142 7-46 (359)
475 3o9z_A Lipopolysaccaride biosy 83.2 5.7 0.0002 39.8 10.5 25 102-126 3-27 (312)
476 1gpj_A Glutamyl-tRNA reductase 83.1 2.1 7.2E-05 44.8 7.4 37 100-139 165-201 (404)
477 2ewd_A Lactate dehydrogenase,; 83.0 2.5 8.7E-05 42.5 7.7 106 102-235 4-111 (317)
478 3lk7_A UDP-N-acetylmuramoylala 82.9 6.9 0.00024 41.4 11.5 86 100-219 7-94 (451)
479 1t2d_A LDH-P, L-lactate dehydr 82.6 6.6 0.00023 39.6 10.7 114 102-243 4-123 (322)
480 1tt5_B Ubiquitin-activating en 82.6 1.2 4.2E-05 47.1 5.3 92 101-206 39-138 (434)
481 1uuf_A YAHK, zinc-type alcohol 82.1 1.6 5.5E-05 45.0 6.0 36 101-140 194-229 (369)
482 3two_A Mannitol dehydrogenase; 82.1 1.6 5.3E-05 44.6 5.8 38 100-141 175-212 (348)
483 3uog_A Alcohol dehydrogenase; 81.9 1.9 6.5E-05 44.3 6.4 36 100-139 188-223 (363)
484 4i4d_A Peptide synthetase NRPS 81.7 0.24 8.1E-06 40.4 -0.5 48 24-71 35-88 (93)
485 1e3j_A NADP(H)-dependent ketos 81.6 1.4 4.7E-05 45.1 5.2 35 100-138 167-201 (352)
486 3gg2_A Sugar dehydrogenase, UD 81.5 2.3 7.8E-05 45.3 7.0 33 103-139 3-35 (450)
487 1a4i_A Methylenetetrahydrofola 81.3 2.6 8.9E-05 42.0 6.8 34 100-136 163-196 (301)
488 3orq_A N5-carboxyaminoimidazol 81.2 2 6.9E-05 44.4 6.4 70 100-203 10-79 (377)
489 2nvu_B Maltose binding protein 81.2 3.1 0.00011 47.7 8.5 92 101-206 410-509 (805)
490 1b0a_A Protein (fold bifunctio 80.8 2.2 7.6E-05 42.3 6.1 34 100-136 157-190 (288)
491 1r0k_A 1-deoxy-D-xylulose 5-ph 80.6 6.1 0.00021 40.9 9.6 36 103-139 5-40 (388)
492 2rir_A Dipicolinate synthase, 80.5 3.4 0.00012 41.2 7.6 36 100-139 155-190 (300)
493 3cmm_A Ubiquitin-activating en 80.4 2.7 9.3E-05 49.2 7.6 116 97-251 420-564 (1015)
494 3oa2_A WBPB; oxidoreductase, s 80.4 8.3 0.00029 38.7 10.5 36 102-139 3-38 (318)
495 4ej6_A Putative zinc-binding d 80.3 3.2 0.00011 42.7 7.5 36 100-138 181-216 (370)
496 3gqv_A Enoyl reductase; medium 80.0 1.8 6E-05 44.7 5.4 35 100-137 163-197 (371)
497 2liu_A CURA; holo state, trans 80.0 1.8 6E-05 35.1 4.3 44 44-87 41-85 (99)
498 1edz_A 5,10-methylenetetrahydr 79.8 3.4 0.00011 41.7 7.2 37 99-138 174-210 (320)
499 2dq4_A L-threonine 3-dehydroge 79.6 1.1 3.6E-05 45.8 3.5 35 101-138 164-198 (343)
500 2c2x_A Methylenetetrahydrofola 79.4 2.7 9.4E-05 41.5 6.2 37 100-137 156-192 (281)
No 1
>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}
Probab=100.00 E-value=3.9e-37 Score=340.88 Aligned_cols=381 Identities=17% Similarity=0.147 Sum_probs=231.0
Q ss_pred hhhHHHHHHHHHHhhcCCCCccccccCCCCchhhhh----------cCCcc-------------------cccccCCcEE
Q psy6053 55 CEVIVSELVMAANKVNNMNVPYETFYKPPVLSEEYR----------NLPDR-------------------IGETFTGKTL 105 (614)
Q Consensus 55 ~s~~~~~l~~~l~~~~~~~~~~~~~~~~~tl~~~~~----------~~~~~-------------------i~~~~~~~~V 105 (614)
+|+.+++|+..+++ +|+++++.++|++||++.-.. ..+.. ....-.+|+|
T Consensus 75 ~Sl~a~~l~~~~~~-~~~~~~~~~~~~~~t~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V 153 (508)
T 4f6l_B 75 NSLEAMLVVSHLKR-FGHHISMQTLYQYKTVRQIVNYMYQNQQSLVALPDNLSELQKIVMSRYNLGILEDSLSHRPLGNT 153 (508)
T ss_dssp ---------------------------------------------CCCCSTHHHHHHHHHHHHTTCCCSTTSCBCCCEEE
T ss_pred hHHHHHHHHHHHHH-cCCCccHHHHhcCCcHHHHHHHHHhhccccccchhhhHHHHHHhhhcccccccccccccCCCCeE
Confidence 89999999999986 899999999999999873110 01110 0111235899
Q ss_pred EEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCCC-CCC
Q psy6053 106 FMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAEA-DEL 184 (614)
Q Consensus 106 LITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~~-~~l 184 (614)
||||||||||++|+++|++.|++ |+|++|+.......+|+.+.++...-..... . ...+++++.||+++ +.+
T Consensus 154 LVTGatG~iG~~l~~~L~~~g~~---V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~---~-~~~~v~~v~~Dl~d~~~l 226 (508)
T 4f6l_B 154 LLTGATGFLGAYLIEALQGYSHR---IYCFIRADNEEIAWYKLMTNLNDYFSEETVE---M-MLSNIEVIVGDFECMDDV 226 (508)
T ss_dssp EESCTTSHHHHHHHHHTBTTEEE---EEEEEESSSHHHHHHHHHHHHHHHSCHHHHH---H-HSTTEEEEEEBTTBCSSC
T ss_pred EEECCccchHHHHHHHHHhcCCE---EEEEECCCChHHHHHHHHHHHHHhcccccch---h-ccCceEEEecCCcccccC
Confidence 99999999999999999887654 9999999876666777766554321111111 1 34689999999999 555
Q ss_pred CCCHHHHHHHhccccEEEEcccccChhHHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEeCceeccCC-------cccc
Q psy6053 185 AIKESDRQLLASEVDIMIHGAATIRFDEALKKAVLLNTRGTKMMLSLAKEMKHLELFVHISTAYCHLQE-------KVLY 257 (614)
Q Consensus 185 GLs~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vST~~~~~~~-------~~i~ 257 (614)
+ +..++|+|||+||.+++..++....++|+.||.+++++|++ +.++|||+||.++ +.. .+++
T Consensus 227 ~--------~~~~~D~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~--~~~~~v~iSS~~v-G~~~~~~~~~~~~~ 295 (508)
T 4f6l_B 227 V--------LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ--HHARLIYVSTISV-GTYFDIDTEDVTFS 295 (508)
T ss_dssp C--------CSSCCSEEEECCCC--------CCHHHHHHHHHHHHHHHHT--TTCEEEEEEESCT-TSEECTTCSCCEEC
T ss_pred C--------CccCCCEEEECCceecCCCCHHHHhhhHHHHHHHHHHHHHh--CCCcEEEeCChhh-ccCCccCCcCcccc
Confidence 4 66799999999999988888888999999999999999998 6689999999988 331 2344
Q ss_pred cccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhhCCCCEEEeecceeecccCCCCccc
Q psy6053 258 EKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMNNGMPCLMLRPSIIIPVWREPLPGW 337 (614)
Q Consensus 258 E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~~glp~~IvRp~~I~g~~~~p~~gw 337 (614)
|+....+ ....++|+.||+.+|+++.++.+.|++++|+|||.|+|+...+. +
T Consensus 296 E~~~~~~--------------------------~~~~~~Y~~sK~~~E~~~~~~~~~gi~~~ilRp~~v~G~~~~~~--~ 347 (508)
T 4f6l_B 296 EADVYKG--------------------------QLLTSPYTRSKFYSELKVLEAVNNGLDGRIVRVGNLTSPYNGRW--H 347 (508)
T ss_dssp TTCSCSS--------------------------BCCCSHHHHHHHHHHHHHHHHHHTTCEEEEEEECCEESCSSSCC--C
T ss_pred ccccccc--------------------------ccCCCcHHHHHHHHHHHHHHHHHcCCCEEEEecceeccCCCCCc--c
Confidence 4422111 11348999999999999999876799999999999999976531 1
Q ss_pred cCCC--CchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEeccCCcccccHHHHHHH
Q psy6053 338 TDNI--NGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLTSSQEWQVSWQEIIDI 415 (614)
Q Consensus 338 ~d~~--~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~~~~~~~it~~e~~~~ 415 (614)
..+. .....++.....+.... .++++..++++||||+|++++.++..+. .+++||++++ ++++|.|+++.
T Consensus 348 ~~~~~~~~~~~~i~~~~~~~~~~-~~~g~~~~~~v~v~DvA~ai~~~~~~~~-----~~~~~nl~~~--~~~s~~el~~~ 419 (508)
T 4f6l_B 348 MRNIKTNRFSMVMNDLLQLDCIG-VSMAEMPVDFSFVDTTARQIVALAQVNT-----PQIIYHVLSP--NKMPVKSLLEC 419 (508)
T ss_dssp CTTCTTCHHHHHHHHHTTCSEEE-TTGGGSEEECEEHHHHHHHHHHHTTBCC-----SCSEEEESCS--CEEEHHHHHHH
T ss_pred cCCcchHHHHHHHHHHHHcCCCC-CCccCceEEEEcHHHHHHHHHHHHhCCC-----CCCEEEeCCC--CCCCHHHHHHH
Confidence 1121 11234555555443222 1346889999999999999999986543 6789999999 89999999999
Q ss_pred HhhhcccccCCCCccccCCcccccchhHHHHHHHHHhhhHHHHHHHHHHHhCCChHHHHHHHHHHHHHhhhhhhhcceEE
Q psy6053 416 GKSIVTTEVPLNGCVWYPGGSMKSNRLLHQICVIFFHMIPAYFLDAIIFLSGNKPCLVKIQDRINKGFEVFEYYANNQWE 495 (614)
Q Consensus 416 ~~~~~g~~~p~~~~~~~p~~~~~~~~~~~~~~~~~~~~~pa~~~d~~~~~~G~~P~~~~l~~ki~~~~~~~~~f~~~~w~ 495 (614)
+.+. + .+. .| .+.+..... ..|..|.+ .+.. .-.....+.
T Consensus 420 i~~~-~--~~~-----~~--------------------~~~w~~~l~--~~~~~~~~-~~~~---------~~~~~~~~~ 459 (508)
T 4f6l_B 420 VKRK-E--IEL-----VS--------------------DESFNEILQ--KQDMYETI-GLTS---------VDREQQLAM 459 (508)
T ss_dssp HHSS-C--CEE-----EC--------------------HHHHHHHHH--TTCCHHHH-HHHH---------TGGGSEECE
T ss_pred HHHc-C--Ccc-----cC--------------------HHHHHHHHH--hcCCccch-hccc---------ccccCccee
Confidence 9987 4 111 11 222221111 11333322 1110 112234678
Q ss_pred EechhHHHHHHHcChhccccccCcCCCCCHHHHHHHHHHHHHHH
Q psy6053 496 FRNEYVHVLRKIMNKRERIEYKIDGEDLDIKKYFQDCIMATRIF 539 (614)
Q Consensus 496 f~~~n~~~l~~~l~~~D~~~f~~d~~~~dw~~Y~~~~~~G~r~y 539 (614)
|++.++.+.+..+. |....++ ++|++.++.-++.+
T Consensus 460 ~d~~~~~~~l~~~G--------~~~~~~~-~~~l~~~~~~~~~~ 494 (508)
T 4f6l_B 460 IDTTLTLKIMNHIS--------EKWPTIT-NNWLYHWAQYIKTI 494 (508)
T ss_dssp ECCHHHHHHHHHHS--------CCCCCCC-HHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHcC--------CCCCCCC-HHHHHHHHHHHHHH
Confidence 99999998888763 3445555 67777777766666
No 2
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=100.00 E-value=6.7e-35 Score=307.07 Aligned_cols=315 Identities=19% Similarity=0.155 Sum_probs=229.6
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
+++|+|||||||||||++|+++|+++|++ |++++|...... +.+.++... .+.....+++++.||+
T Consensus 23 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~---V~~~~r~~~~~~--~~~~~~~~~---------~~~~~~~~~~~~~~Dl 88 (351)
T 3ruf_A 23 FSPKTWLITGVAGFIGSNLLEKLLKLNQV---VIGLDNFSTGHQ--YNLDEVKTL---------VSTEQWSRFCFIEGDI 88 (351)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEECCSSCCH--HHHHHHHHT---------SCHHHHTTEEEEECCT
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCCCE---EEEEeCCCCCch--hhhhhhhhc---------cccccCCceEEEEccC
Confidence 46799999999999999999999999876 999999865432 222222110 0000115799999999
Q ss_pred CCCCCCCCHHHHHHHhccccEEEEcccccChhH---HHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEeCceeccCCc--
Q psy6053 180 EADELAIKESDRQLLASEVDIMIHGAATIRFDE---ALKKAVLLNTRGTKMMLSLAKEMKHLELFVHISTAYCHLQEK-- 254 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~~vd~ViH~AA~v~~~~---~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vST~~~~~~~~-- 254 (614)
++++ ++..+++++|+|||+||...... .....+++|+.||.+++++|++. ++++|||+||.++++...
T Consensus 89 ~d~~------~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~v~~SS~~vyg~~~~~ 161 (351)
T 3ruf_A 89 RDLT------TCEQVMKGVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNA-QVQSFTYAASSSTYGDHPAL 161 (351)
T ss_dssp TCHH------HHHHHTTTCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TCSEEEEEEEGGGGTTCCCS
T ss_pred CCHH------HHHHHhcCCCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEecHHhcCCCCCC
Confidence 9865 89999999999999999866543 34567899999999999999995 899999999998876543
Q ss_pred ccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh-CCCCEEEeecceeecccCCC
Q psy6053 255 VLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN-NGMPCLMLRPSIIIPVWREP 333 (614)
Q Consensus 255 ~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~-~glp~~IvRp~~I~g~~~~p 333 (614)
+++|+....| .+.|+.||+.+|++++.+.. .|++++|+||+.|||+...+
T Consensus 162 ~~~E~~~~~p-----------------------------~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~ 212 (351)
T 3ruf_A 162 PKVEENIGNP-----------------------------LSPYAVTKYVNEIYAQVYARTYGFKTIGLRYFNVFGRRQDP 212 (351)
T ss_dssp SBCTTCCCCC-----------------------------CSHHHHHHHHHHHHHHHHHHHHCCCCEEEEECSEESTTCCC
T ss_pred CCccCCCCCC-----------------------------CChhHHHHHHHHHHHHHHHHHhCCCEEEEeeCceeCcCCCC
Confidence 5666644333 27899999999999998876 59999999999999998754
Q ss_pred CccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEeccCCcccccHHHHH
Q psy6053 334 LPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLTSSQEWQVSWQEII 413 (614)
Q Consensus 334 ~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~~~~~~~it~~e~~ 413 (614)
...+. .....++..+..|....++++++..+++++|||+|++++.++..... ..+++||++++ +++|+.|++
T Consensus 213 ~~~~~---~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~~---~~~~~~ni~~~--~~~s~~e~~ 284 (351)
T 3ruf_A 213 NGAYA---AVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQMNILSALAKDS---AKDNIYNVAVG--DRTTLNELS 284 (351)
T ss_dssp CSTTC---CHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCCGG---GCSEEEEESCS--CCEEHHHHH
T ss_pred Ccchh---hHHHHHHHHHHcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHhhccc---cCCCEEEeCCC--CcccHHHHH
Confidence 32111 11234566677777777788999999999999999999998876211 26889999999 899999999
Q ss_pred HHHhhhcccccCCCC--ccccCCcccccchhHHHHHHHHHhhhHHHHHHHHHHHhCCChHHHHHHHHHHHHHhhhhhh
Q psy6053 414 DIGKSIVTTEVPLNG--CVWYPGGSMKSNRLLHQICVIFFHMIPAYFLDAIIFLSGNKPCLVKIQDRINKGFEVFEYY 489 (614)
Q Consensus 414 ~~~~~~~g~~~p~~~--~~~~p~~~~~~~~~~~~~~~~~~~~~pa~~~d~~~~~~G~~P~~~~l~~ki~~~~~~~~~f 489 (614)
+.+.+.+|.+.+... ..+.+......... ..-.+.+.+.+||+|+. .+.+.+.+ .++||
T Consensus 285 ~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~-------------~~d~~k~~~~lG~~p~~-~~~~~l~~---~~~~~ 345 (351)
T 3ruf_A 285 GYIYDELNLIHHIDKLSIKYREFRSGDVRHS-------------QADVTKAIDLLKYRPNI-KIREGLRL---SMPWY 345 (351)
T ss_dssp HHHHHHHHTTCCC-----EEECCCTTCCSBC-------------CBCCHHHHHHHCCCCCC-CHHHHHHH---HHHHH
T ss_pred HHHHHHhCcccccccccccccCCCCCcccee-------------eeCHHHHHHHhCCCCCC-CHHHHHHH---HHHHH
Confidence 999999887322111 11111100000000 01123456678999987 67777776 44454
No 3
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=100.00 E-value=1.8e-34 Score=303.24 Aligned_cols=305 Identities=15% Similarity=0.153 Sum_probs=225.0
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
.++|+|||||||||||++|+++|++.|+++ +|+++.|....... +++++. . ...+++++.||+
T Consensus 22 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~-~v~~~~~~~~~~~~-~~l~~~------------~---~~~~~~~~~~Dl 84 (346)
T 4egb_A 22 SNAMNILVTGGAGFIGSNFVHYMLQSYETY-KIINFDALTYSGNL-NNVKSI------------Q---DHPNYYFVKGEI 84 (346)
T ss_dssp --CEEEEEETTTSHHHHHHHHHHHHHCTTE-EEEEEECCCTTCCG-GGGTTT------------T---TCTTEEEEECCT
T ss_pred cCCCeEEEECCccHHHHHHHHHHHhhCCCc-EEEEEeccccccch-hhhhhh------------c---cCCCeEEEEcCC
Confidence 457899999999999999999999999763 58888886533221 111100 0 225799999999
Q ss_pred CCCCCCCCHHHHHHHhcc--ccEEEEcccccChh---HHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEeCceeccCC-
Q psy6053 180 EADELAIKESDRQLLASE--VDIMIHGAATIRFD---EALKKAVLLNTRGTKMMLSLAKEMKHLELFVHISTAYCHLQE- 253 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~~--vd~ViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vST~~~~~~~- 253 (614)
++++ .+..++++ +|+|||+||..... ......+++|+.||.+++++|++. ++++|||+||.++++..
T Consensus 85 ~d~~------~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~v~~SS~~vy~~~~ 157 (346)
T 4egb_A 85 QNGE------LLEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKY-PHIKLVQVSTDEVYGSLG 157 (346)
T ss_dssp TCHH------HHHHHHHHHTCCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHS-TTSEEEEEEEGGGGCCCC
T ss_pred CCHH------HHHHHHhhcCCCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEeCchHHhCCCC
Confidence 9865 78888887 99999999987654 445668899999999999999995 88999999999887754
Q ss_pred --cccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh-CCCCEEEeecceeeccc
Q psy6053 254 --KVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN-NGMPCLMLRPSIIIPVW 330 (614)
Q Consensus 254 --~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~-~glp~~IvRp~~I~g~~ 330 (614)
.+++|+....|. +.|+.||+.+|+++..+.. .|++++++||+.|||+.
T Consensus 158 ~~~~~~E~~~~~p~-----------------------------~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~ 208 (346)
T 4egb_A 158 KTGRFTEETPLAPN-----------------------------SPYSSSKASADMIALAYYKTYQLPVIVTRCSNNYGPY 208 (346)
T ss_dssp SSCCBCTTSCCCCC-----------------------------SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTT
T ss_pred cCCCcCCCCCCCCC-----------------------------ChhHHHHHHHHHHHHHHHHHhCCCEEEEeecceeCcC
Confidence 356666433332 7899999999999999876 69999999999999987
Q ss_pred CCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEeccCCcccccHH
Q psy6053 331 REPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLTSSQEWQVSWQ 410 (614)
Q Consensus 331 ~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~~~~~~~it~~ 410 (614)
..+. .....++..+..|....++++++..+++++|+|+|++++.++.... .+++||++++ +++++.
T Consensus 209 ~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~-----~g~~~~i~~~--~~~s~~ 274 (346)
T 4egb_A 209 QYPE-------KLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLHKGR-----VGEVYNIGGN--NEKTNV 274 (346)
T ss_dssp CCTT-------SHHHHHHHHHHTTCCCEEETTSCCEECEEEHHHHHHHHHHHHHHCC-----TTCEEEECCS--CCEEHH
T ss_pred CCcc-------chHHHHHHHHHcCCCceeeCCCCeEEeeEEHHHHHHHHHHHHhcCC-----CCCEEEECCC--CceeHH
Confidence 6431 1233466667777766677889999999999999999999987653 6789999999 889999
Q ss_pred HHHHHHhhhcccccCCCCccccCCcccccchhHHHHHHHHHhhhHHHHHHHHHHHhCCChHHHHHHHHHHHHHhhhhhhh
Q psy6053 411 EIIDIGKSIVTTEVPLNGCVWYPGGSMKSNRLLHQICVIFFHMIPAYFLDAIIFLSGNKPCLVKIQDRINKGFEVFEYYA 490 (614)
Q Consensus 411 e~~~~~~~~~g~~~p~~~~~~~p~~~~~~~~~~~~~~~~~~~~~pa~~~d~~~~~~G~~P~~~~l~~ki~~~~~~~~~f~ 490 (614)
|+++.+.+.+|.+.+... +.+........+ ..-.+.+.+.+||+|.. .+.+.+.+ .++||.
T Consensus 275 e~~~~i~~~~g~~~~~~~--~~~~~~~~~~~~-------------~~d~~k~~~~lG~~p~~-~~~e~l~~---~~~~~~ 335 (346)
T 4egb_A 275 EVVEQIITLLGKTKKDIE--YVTDRLGHDRRY-------------AINAEKMKNEFDWEPKY-TFEQGLQE---TVQWYE 335 (346)
T ss_dssp HHHHHHHHHHTCCGGGCE--EECC--CCCSCC-------------CBCCHHHHHHHCCCCCC-CHHHHHHH---HHHHHH
T ss_pred HHHHHHHHHhCCCccccc--ccCCCCCCccee-------------eccHHHHHHHcCCCCCC-CHHHHHHH---HHHHHH
Confidence 999999999898655221 111110000000 01123445678999987 67777776 555654
No 4
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=100.00 E-value=5.3e-34 Score=298.80 Aligned_cols=311 Identities=18% Similarity=0.126 Sum_probs=226.3
Q ss_pred CCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcC-HHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 101 TGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKN-ARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 101 ~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~-~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
.+|+|||||||||||++++++|++.|++ |+++.|...... ..+++.+. ...++.++.+|+
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~---V~~~~r~~~~~~~~~~~~~~~----------------~~~~~~~~~~Dl 64 (341)
T 3enk_A 4 TKGTILVTGGAGYIGSHTAVELLAHGYD---VVIADNLVNSKREAIARIEKI----------------TGKTPAFHETDV 64 (341)
T ss_dssp SSCEEEEETTTSHHHHHHHHHHHHTTCE---EEEECCCSSSCTHHHHHHHHH----------------HSCCCEEECCCT
T ss_pred CCcEEEEecCCcHHHHHHHHHHHHCCCc---EEEEecCCcchHHHHHHHHhh----------------cCCCceEEEeec
Confidence 4689999999999999999999999876 899999765432 22222221 234788999999
Q ss_pred CCCCCCCCHHHHHHHhc--cccEEEEcccccChhH---HHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEeCceeccCCc
Q psy6053 180 EADELAIKESDRQLLAS--EVDIMIHGAATIRFDE---ALKKAVLLNTRGTKMMLSLAKEMKHLELFVHISTAYCHLQEK 254 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~--~vd~ViH~AA~v~~~~---~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vST~~~~~~~~ 254 (614)
++++ +++.+++ ++|+|||+||...... .....+++|+.||.+++++|++ .++++|||+||..+++...
T Consensus 65 ~d~~------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~-~~~~~iv~~SS~~~~g~~~ 137 (341)
T 3enk_A 65 SDER------ALARIFDAHPITAAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRE-RAVKRIVFSSSATVYGVPE 137 (341)
T ss_dssp TCHH------HHHHHHHHSCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHH-TTCCEEEEEEEGGGBCSCS
T ss_pred CCHH------HHHHHHhccCCcEEEECccccccCccccChHHHHHHHHHHHHHHHHHHHh-CCCCEEEEEecceEecCCC
Confidence 9865 8888887 8999999999876533 3346789999999999999999 4889999999987775433
Q ss_pred --ccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh-C-CCCEEEeecceeeccc
Q psy6053 255 --VLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN-N-GMPCLMLRPSIIIPVW 330 (614)
Q Consensus 255 --~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~-~-glp~~IvRp~~I~g~~ 330 (614)
+++|+....| .+.|+.||+.+|++++.+.. . +++++++||++|||+.
T Consensus 138 ~~~~~e~~~~~~-----------------------------~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lRp~~v~G~~ 188 (341)
T 3enk_A 138 RSPIDETFPLSA-----------------------------TNPYGQTKLMAEQILRDVEAADPSWRVATLRYFNPVGAH 188 (341)
T ss_dssp SSSBCTTSCCBC-----------------------------SSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCC
T ss_pred CCCCCCCCCCCC-----------------------------CChhHHHHHHHHHHHHHHhhcCCCceEEEEeeccccCCc
Confidence 5666543322 27899999999999998876 3 5999999999999997
Q ss_pred CCCCccccCCC--CchHHHHHHHhcCc--eeeEee------CCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEec
Q psy6053 331 REPLPGWTDNI--NGPTGLLIGAGKGV--IRTMFC------DNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLT 400 (614)
Q Consensus 331 ~~p~~gw~d~~--~g~~~~~~~~~~g~--~~~~~~------~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~ 400 (614)
..++.|...+. ......+.....|. ...+++ ++++.++++||+|+|++++.++..... ...+++||++
T Consensus 189 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~--~~~~~~~ni~ 266 (341)
T 3enk_A 189 ESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPTPDGTGVRDYIHVVDLARGHIAALDALER--RDASLTVNLG 266 (341)
T ss_dssp TTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHH--HTSCEEEEES
T ss_pred cccccCCCcccCccchHHHHHHHHhcCCCceEEeCCccCCCCCCeeEeeEEHHHHHHHHHHHHHhhhc--CCcceEEEeC
Confidence 65444432211 22333444444443 233455 788999999999999999999887321 0267899999
Q ss_pred cCCcccccHHHHHHHHhhhcccccCCCCccccCCcccccchhHHHHHHHHHhhhHHHHHHHHHHHhCCChHHHHHHHHHH
Q psy6053 401 SSQEWQVSWQEIIDIGKSIVTTEVPLNGCVWYPGGSMKSNRLLHQICVIFFHMIPAYFLDAIIFLSGNKPCLVKIQDRIN 480 (614)
Q Consensus 401 ~~~~~~it~~e~~~~~~~~~g~~~p~~~~~~~p~~~~~~~~~~~~~~~~~~~~~pa~~~d~~~~~~G~~P~~~~l~~ki~ 480 (614)
++ +++|+.|+++.+.+.+|.+.|.......+... ... ..-.+.+.+.+||+|+. .+.+.+.
T Consensus 267 ~~--~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~---~~~-------------~~d~~k~~~~lG~~p~~-~l~~~l~ 327 (341)
T 3enk_A 267 TG--RGYSVLEVVRAFEKASGRAVPYELVARRPGDV---AEC-------------YANPAAAAETIGWKAER-DLERMCA 327 (341)
T ss_dssp CS--CCEEHHHHHHHHHHHHCSCCCEEEECCCTTCC---SEE-------------CBCCHHHHHHHCCCCCC-CHHHHHH
T ss_pred CC--CceeHHHHHHHHHHHhCCCcceeeCCCCCCCc---ccc-------------ccCHHHHHHHcCCCCCC-CHHHHHH
Confidence 98 89999999999999989876543211111110 000 00123456789999977 6778877
Q ss_pred HHHhhhhhhh
Q psy6053 481 KGFEVFEYYA 490 (614)
Q Consensus 481 ~~~~~~~~f~ 490 (614)
+ .++||.
T Consensus 328 ~---~~~~~~ 334 (341)
T 3enk_A 328 D---HWRWQE 334 (341)
T ss_dssp H---HHHHHH
T ss_pred H---HHHHHH
Confidence 7 555654
No 5
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=100.00 E-value=1.1e-34 Score=300.49 Aligned_cols=289 Identities=17% Similarity=0.065 Sum_probs=222.4
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCCC
Q psy6053 102 GKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAEA 181 (614)
Q Consensus 102 ~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~~ 181 (614)
+|+|||||||||||++|+++|+++|++ |++++|..... ...+++++.+|++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~---V~~~~r~~~~~-------------------------~~~~~~~~~~Dl~- 52 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKNDGNT---PIILTRSIGNK-------------------------AINDYEYRVSDYT- 52 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCCC------------------------------CCEEEECCCC-
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCE---EEEEeCCCCcc-------------------------cCCceEEEEcccc-
Confidence 479999999999999999999999875 99999983221 1126789999999
Q ss_pred CCCCCCHHHHHHHhccccEEEEcccccChhHHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEeCceeccCCc--ccccc
Q psy6053 182 DELAIKESDRQLLASEVDIMIHGAATIRFDEALKKAVLLNTRGTKMMLSLAKEMKHLELFVHISTAYCHLQEK--VLYEK 259 (614)
Q Consensus 182 ~~lGLs~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vST~~~~~~~~--~i~E~ 259 (614)
++ ++.++++++|+|||+||..... ......++|+.||.+++++|++. ++++|||+||.++++... +++|+
T Consensus 53 ~~------~~~~~~~~~d~Vih~a~~~~~~-~~~~~~~~n~~~~~~ll~a~~~~-~~~r~v~~SS~~vyg~~~~~~~~E~ 124 (311)
T 3m2p_A 53 LE------DLINQLNDVDAVVHLAATRGSQ-GKISEFHDNEILTQNLYDACYEN-NISNIVYASTISAYSDETSLPWNEK 124 (311)
T ss_dssp HH------HHHHHTTTCSEEEECCCCCCSS-SCGGGTHHHHHHHHHHHHHHHHT-TCCEEEEEEEGGGCCCGGGCSBCTT
T ss_pred HH------HHHHhhcCCCEEEEccccCCCC-ChHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEccHHHhCCCCCCCCCCC
Confidence 76 8999999999999999987655 44567899999999999999994 899999999998776543 56666
Q ss_pred cCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh-CCCCEEEeecceeecccCCCCcccc
Q psy6053 260 PYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN-NGMPCLMLRPSIIIPVWREPLPGWT 338 (614)
Q Consensus 260 ~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~-~glp~~IvRp~~I~g~~~~p~~gw~ 338 (614)
..+.| .+.|+.||+.+|++++++.. .|++++|+||+.|||+...+.
T Consensus 125 ~~~~p-----------------------------~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~---- 171 (311)
T 3m2p_A 125 ELPLP-----------------------------DLMYGVSKLACEHIGNIYSRKKGLCIKNLRFAHLYGFNEKNN---- 171 (311)
T ss_dssp SCCCC-----------------------------SSHHHHHHHHHHHHHHHHHHHSCCEEEEEEECEEECSCC--C----
T ss_pred CCCCC-----------------------------CchhHHHHHHHHHHHHHHHHHcCCCEEEEeeCceeCcCCCCC----
Confidence 43333 27899999999999999887 799999999999999876431
Q ss_pred CCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEeccCCcccccHHHHHHHHhh
Q psy6053 339 DNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLTSSQEWQVSWQEIIDIGKS 418 (614)
Q Consensus 339 d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~~~~~~~it~~e~~~~~~~ 418 (614)
.....++..+..|....++++++..+++++++|+|++++.++.+.. .+++||++++ +++|+.|+++.+.+
T Consensus 172 ---~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~~-----~~~~~~i~~~--~~~s~~e~~~~i~~ 241 (311)
T 3m2p_A 172 ---YMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQEK-----VSGTFNIGSG--DALTNYEVANTINN 241 (311)
T ss_dssp ---CHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHHHHHHHHTTCTT-----CCEEEEECCS--CEECHHHHHHHHHH
T ss_pred ---CHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHHHHHHHHHhcCC-----CCCeEEeCCC--CcccHHHHHHHHHH
Confidence 1233466667778777777889999999999999999999886543 6789999999 88999999999999
Q ss_pred hcccccCCCCccccCC-cccccchhHHHHHHHHHhhhHHHHHHHHHHHhCCChHHHHHHHHHHHHHhhhhhhh
Q psy6053 419 IVTTEVPLNGCVWYPG-GSMKSNRLLHQICVIFFHMIPAYFLDAIIFLSGNKPCLVKIQDRINKGFEVFEYYA 490 (614)
Q Consensus 419 ~~g~~~p~~~~~~~p~-~~~~~~~~~~~~~~~~~~~~pa~~~d~~~~~~G~~P~~~~l~~ki~~~~~~~~~f~ 490 (614)
.+|.+.+... .|. ........ ..-.+.+.+.+||+|.. .+.+.+.+ .++|+.
T Consensus 242 ~~g~~~~~~~---~~~~~~~~~~~~-------------~~d~~k~~~~lG~~p~~-~~~~~l~~---~~~~~~ 294 (311)
T 3m2p_A 242 AFGNKDNLLV---KNPNANEGIHSS-------------YMDSSKAKELLDFSTDY-NFATAVEE---IHLLMR 294 (311)
T ss_dssp HTTCTTCEEE---CSSSBCCSCCCB-------------CBCCHHHHHHSCCCCSC-CHHHHHHH---HHHHHC
T ss_pred HhCCCCccee---cCCCCCCCcCce-------------ecCHHHHHHHhCCCccc-CHHHHHHH---HHHHHH
Confidence 9888654321 111 00000000 01124456779999987 67777776 455554
No 6
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=100.00 E-value=5.9e-34 Score=302.36 Aligned_cols=327 Identities=14% Similarity=0.091 Sum_probs=228.3
Q ss_pred ccCCcEEEEecccccccHHHHHHHHhh-CCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeC
Q psy6053 99 TFTGKTLFMTGASGFLGKVLLEKILRK-SPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISG 177 (614)
Q Consensus 99 ~~~~~~VLITGaTGFlG~~Ll~~Ll~~-g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~g 177 (614)
.+++|+|||||||||||++|+++|+++ |++ |++++|+...... +. ...+++++.|
T Consensus 21 ~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~---V~~~~r~~~~~~~---------------~~------~~~~v~~~~~ 76 (372)
T 3slg_A 21 SMKAKKVLILGVNGFIGHHLSKRILETTDWE---VFGMDMQTDRLGD---------------LV------KHERMHFFEG 76 (372)
T ss_dssp --CCCEEEEESCSSHHHHHHHHHHHHHSSCE---EEEEESCCTTTGG---------------GG------GSTTEEEEEC
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHhCCCCE---EEEEeCChhhhhh---------------hc------cCCCeEEEeC
Confidence 356789999999999999999999998 765 9999998643210 00 2257999999
Q ss_pred CCC-CCCCCCCHHHHHHHhccccEEEEcccccChh---HHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEeCceeccCC
Q psy6053 178 DAE-ADELAIKESDRQLLASEVDIMIHGAATIRFD---EALKKAVLLNTRGTKMMLSLAKEMKHLELFVHISTAYCHLQE 253 (614)
Q Consensus 178 Dl~-~~~lGLs~~~~~~l~~~vd~ViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vST~~~~~~~ 253 (614)
|++ +++ .+..+++++|+|||+||..... ......+++|+.||.+++++|++. + ++|||+||.++++..
T Consensus 77 Dl~~d~~------~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~-~~~v~~SS~~vyg~~ 148 (372)
T 3slg_A 77 DITINKE------WVEYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKY-G-KHLVFPSTSEVYGMC 148 (372)
T ss_dssp CTTTCHH------HHHHHHHHCSEEEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHH-T-CEEEEECCGGGGBSC
T ss_pred ccCCCHH------HHHHHhccCCEEEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHh-C-CcEEEeCcHHHhCCC
Confidence 999 654 7888889999999999987753 244567899999999999999996 6 899999999877654
Q ss_pred c--ccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhhCCCCEEEeecceeecccC
Q psy6053 254 K--VLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMNNGMPCLMLRPSIIIPVWR 331 (614)
Q Consensus 254 ~--~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~~glp~~IvRp~~I~g~~~ 331 (614)
. ++.|+..+.+.++. ....+.|+.||+.+|++++.+...|++++|+||+.|||+..
T Consensus 149 ~~~~~~e~~~~~~~~p~----------------------~~p~~~Y~~sK~~~E~~~~~~~~~g~~~~ilRp~~v~G~~~ 206 (372)
T 3slg_A 149 ADEQFDPDASALTYGPI----------------------NKPRWIYACSKQLMDRVIWGYGMEGLNFTLFRPFNWIGPGL 206 (372)
T ss_dssp CCSSBCTTTCCEEECCT----------------------TCTTHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSEECSSC
T ss_pred CCCCCCccccccccCCC----------------------CCCCCcHHHHHHHHHHHHHHHHHCCCCEEEEccccccCCCc
Confidence 3 45555332111000 01125799999999999999876689999999999999987
Q ss_pred CCCccccCCCCch-HHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEecc-CCcccccH
Q psy6053 332 EPLPGWTDNINGP-TGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLTS-SQEWQVSW 409 (614)
Q Consensus 332 ~p~~gw~d~~~g~-~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~~-~~~~~it~ 409 (614)
.+..++.....+. ..++..+..|....++++++..+++++|+|+|++++.++..... ...+++||+++ + +++|+
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~--~~~~~~~ni~~~~--~~~s~ 282 (372)
T 3slg_A 207 DSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQKRAFTYVDDGISALMKIIENSNG--VATGKIYNIGNPN--NNFSV 282 (372)
T ss_dssp CCTTCSBSCSCHHHHHHHHHHHHTCCEEEGGGGCCEEECEEHHHHHHHHHHHHHCGGG--TTTTEEEEECCTT--CEEEH
T ss_pred ccccccccccchHHHHHHHHHHcCCCcEEeCCCceEEEEEEHHHHHHHHHHHHhcccC--cCCCceEEeCCCC--CCccH
Confidence 6533332222222 24556667777777778889999999999999999999987641 02678999999 5 68999
Q ss_pred HHHHHHHhhhcccccCCCCccccCCcccccchhHHHHHHHHHhhhHHH--HHHHHHHHhCCChHHHHHHHHHHHHHhhhh
Q psy6053 410 QEIIDIGKSIVTTEVPLNGCVWYPGGSMKSNRLLHQICVIFFHMIPAY--FLDAIIFLSGNKPCLVKIQDRINKGFEVFE 487 (614)
Q Consensus 410 ~e~~~~~~~~~g~~~p~~~~~~~p~~~~~~~~~~~~~~~~~~~~~pa~--~~d~~~~~~G~~P~~~~l~~ki~~~~~~~~ 487 (614)
.|+++.+.+.+|.+.+..................+.. ........ -.+.+.+.+||+|+. .+.+.+.+ .++
T Consensus 283 ~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~d~~k~~~~lG~~p~~-~l~e~l~~---~~~ 355 (372)
T 3slg_A 283 RELANKMLELAAEFPEYADSAKRVKLVETTSGAYYGN---GYQDVQNRVPKIENTMQELGWAPQF-TFDDALRQ---IFE 355 (372)
T ss_dssp HHHHHHHHHHHHHCTTTHHHHHTCCEEEC----------------CCCCBCCHHHHHHHTCCCCC-CHHHHHHH---HHH
T ss_pred HHHHHHHHHHhCCCcccccccccceeeeccccccccC---CccccceeecCHHHHHHHcCCCCCC-CHHHHHHH---HHH
Confidence 9999999999887654321000000000000000000 00000001 123456789999987 67777776 555
Q ss_pred hhh
Q psy6053 488 YYA 490 (614)
Q Consensus 488 ~f~ 490 (614)
||.
T Consensus 356 ~~~ 358 (372)
T 3slg_A 356 AYR 358 (372)
T ss_dssp HHT
T ss_pred HHH
Confidence 664
No 7
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=100.00 E-value=7.3e-34 Score=298.63 Aligned_cols=298 Identities=15% Similarity=0.125 Sum_probs=220.4
Q ss_pred ccccCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEe
Q psy6053 97 GETFTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPIS 176 (614)
Q Consensus 97 ~~~~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~ 176 (614)
.+..++|+|||||||||||++|+++|++.|++ |++++|.... .++.++.
T Consensus 14 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~---V~~~~r~~~~----------------------------~~~~~~~ 62 (347)
T 4id9_A 14 LVPRGSHMILVTGSAGRVGRAVVAALRTQGRT---VRGFDLRPSG----------------------------TGGEEVV 62 (347)
T ss_dssp -------CEEEETTTSHHHHHHHHHHHHTTCC---EEEEESSCCS----------------------------SCCSEEE
T ss_pred ccccCCCEEEEECCCChHHHHHHHHHHhCCCE---EEEEeCCCCC----------------------------CCccEEe
Confidence 34466899999999999999999999999987 8999997642 3567899
Q ss_pred CCCCCCCCCCCHHHHHHHhccccEEEEcccccChhH-HHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEeCceeccCC--
Q psy6053 177 GDAEADELAIKESDRQLLASEVDIMIHGAATIRFDE-ALKKAVLLNTRGTKMMLSLAKEMKHLELFVHISTAYCHLQE-- 253 (614)
Q Consensus 177 gDl~~~~lGLs~~~~~~l~~~vd~ViH~AA~v~~~~-~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vST~~~~~~~-- 253 (614)
+|+++++ .+..+++++|+|||+||...... .....+++|+.||.+++++|++ .++++|||+||.++++..
T Consensus 63 ~Dl~d~~------~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~-~~~~~~V~~SS~~vyg~~~~ 135 (347)
T 4id9_A 63 GSLEDGQ------ALSDAIMGVSAVLHLGAFMSWAPADRDRMFAVNVEGTRRLLDAASA-AGVRRFVFASSGEVYPENRP 135 (347)
T ss_dssp SCTTCHH------HHHHHHTTCSEEEECCCCCCSSGGGHHHHHHHHTHHHHHHHHHHHH-TTCSEEEEEEEGGGTTTTSC
T ss_pred cCcCCHH------HHHHHHhCCCEEEECCcccCcchhhHHHHHHHHHHHHHHHHHHHHH-cCCCeEEEECCHHHhCCCCC
Confidence 9999865 88999999999999999876543 3477899999999999999999 489999999999887652
Q ss_pred --cccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh-CCCCEEEeecceee---
Q psy6053 254 --KVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN-NGMPCLMLRPSIII--- 327 (614)
Q Consensus 254 --~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~-~glp~~IvRp~~I~--- 327 (614)
.+++|+....| .+.|+.||+.+|++++.+.. .|++++|+||+.||
T Consensus 136 ~~~~~~E~~~~~~-----------------------------~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~~~~ 186 (347)
T 4id9_A 136 EFLPVTEDHPLCP-----------------------------NSPYGLTKLLGEELVRFHQRSGAMETVILRFSHTQDAT 186 (347)
T ss_dssp SSSSBCTTSCCCC-----------------------------CSHHHHHHHHHHHHHHHHHHHSSSEEEEEEECEEECGG
T ss_pred CCCCcCCCCCCCC-----------------------------CChHHHHHHHHHHHHHHHHHhcCCceEEEccceEeecc
Confidence 25666543332 27899999999999998876 79999999999999
Q ss_pred ----------cccCCCCccccC----CCCchHHHHHHHhcCceeeEeeCCCccccc----eeHHHHHHHHHHHHHhhhhc
Q psy6053 328 ----------PVWREPLPGWTD----NINGPTGLLIGAGKGVIRTMFCDNTGYADF----LPVDITINGIFVAIWAYLSQ 389 (614)
Q Consensus 328 ----------g~~~~p~~gw~d----~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~----vpVDdva~aii~~~~~~~~~ 389 (614)
|+...+.+.+.+ .......++..+..|....++++++..+++ ++|+|+|++++.++.+...
T Consensus 187 ~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~~- 265 (347)
T 4id9_A 187 ELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQSRDIGEPSHILARNENGRPFRMHITDTRDMVAGILLALDHPEA- 265 (347)
T ss_dssp GTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHHHHHCCSSCCEEEEECTTCCBCEECEEEHHHHHHHHHHHHHCGGG-
T ss_pred cccccccccCCCCcccccccccccccchhHHHHHHHHHHcCCCeEEeCCCCcccCCccCcEeHHHHHHHHHHHhcCccc-
Confidence 554321000000 000112345556667666678889999999 9999999999999987643
Q ss_pred CCCCccEEEeccCCcccccHHHHHHHHhhhcccccCCCCccccCCcccccchhHHHHHHHHHhhhHHHHHHHHHHHhCCC
Q psy6053 390 KEHRQSIVHLTSSQEWQVSWQEIIDIGKSIVTTEVPLNGCVWYPGGSMKSNRLLHQICVIFFHMIPAYFLDAIIFLSGNK 469 (614)
Q Consensus 390 ~~~~~~vyni~~~~~~~it~~e~~~~~~~~~g~~~p~~~~~~~p~~~~~~~~~~~~~~~~~~~~~pa~~~d~~~~~~G~~ 469 (614)
.+++||++++ +++|+.|+++.+.+.+|.+.+... .|.... . ...-.+.+.+.+||+
T Consensus 266 ---~~~~~ni~~~--~~~s~~e~~~~i~~~~g~~~~~~~---~p~~~~--~--------------~~~d~~k~~~~lG~~ 321 (347)
T 4id9_A 266 ---AGGTFNLGAD--EPADFAALLPKIAALTGLPIVTVD---FPGDGV--Y--------------YHTSNERIRNTLGFE 321 (347)
T ss_dssp ---TTEEEEESCS--SCEEHHHHHHHHHHHHCCCEEEEE---CSSCCC--B--------------CCBCCHHHHHHHCCC
T ss_pred ---CCCeEEECCC--CcccHHHHHHHHHHHhCCCCceee---CCCccc--c--------------cccCHHHHHHHhCCC
Confidence 5789999999 899999999999999898655421 222110 0 001124456679999
Q ss_pred hHHHHHHHHHHHHHhhhhhhh
Q psy6053 470 PCLVKIQDRINKGFEVFEYYA 490 (614)
Q Consensus 470 P~~~~l~~ki~~~~~~~~~f~ 490 (614)
|+. .+.+.+.+ .++||.
T Consensus 322 p~~-~~~~~l~~---~~~~~~ 338 (347)
T 4id9_A 322 AEW-TMDRMLEE---AATARR 338 (347)
T ss_dssp CCC-CHHHHHHH---HHHHHH
T ss_pred CCC-CHHHHHHH---HHHHHH
Confidence 986 56777776 444543
No 8
>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}
Probab=100.00 E-value=3.5e-34 Score=314.64 Aligned_cols=298 Identities=21% Similarity=0.283 Sum_probs=218.1
Q ss_pred ccCCcEEEEecccccccHHHHHHHHhhCCCc-cEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeC
Q psy6053 99 TFTGKTLFMTGASGFLGKVLLEKILRKSPNV-KKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISG 177 (614)
Q Consensus 99 ~~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v-~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~g 177 (614)
..++|+|||||||||||++|+++|++.++ + .+|++++|++....+.+|+++.+.....+.+....+. ...+++++.|
T Consensus 70 ~~~~~~VLVTGatG~IG~~l~~~Ll~~~~-~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~v~~v~~ 147 (478)
T 4dqv_A 70 SPELRTVLLTGATGFLGRYLVLELLRRLD-VDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKEL-AADRLEVVAG 147 (478)
T ss_dssp CSCCCEEEEECTTSHHHHHHHHHHHHHSC-TTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHH-HTTTEEEEEC
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHhcCC-CCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhh-ccCceEEEEe
Confidence 35689999999999999999999999932 1 3599999998777677777766654322222221122 3468999999
Q ss_pred CCCCCCCCCCHHHHHHHhccccEEEEcccccChhHHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEeCceeccCCc--c
Q psy6053 178 DAEADELAIKESDRQLLASEVDIMIHGAATIRFDEALKKAVLLNTRGTKMMLSLAKEMKHLELFVHISTAYCHLQEK--V 255 (614)
Q Consensus 178 Dl~~~~lGLs~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vST~~~~~~~~--~ 255 (614)
|++++++|++.+.++.+++++|+|||+||.+++ .++...+++|+.||.+++++|++ .++++|||+||.++++... .
T Consensus 148 Dl~~~~~gld~~~~~~~~~~~D~Vih~Aa~~~~-~~~~~~~~~Nv~gt~~ll~aa~~-~~~~~~V~iSS~~v~~~~~~~~ 225 (478)
T 4dqv_A 148 DKSEPDLGLDQPMWRRLAETVDLIVDSAAMVNA-FPYHELFGPNVAGTAELIRIALT-TKLKPFTYVSTADVGAAIEPSA 225 (478)
T ss_dssp CTTSGGGGCCHHHHHHHHHHCCEEEECCSSCSB-SSCCEEHHHHHHHHHHHHHHHTS-SSCCCEEEEEEGGGGTTSCTTT
T ss_pred ECCCcccCCCHHHHHHHHcCCCEEEECccccCC-cCHHHHHHHHHHHHHHHHHHHHh-CCCCeEEEEeehhhcCccCCCC
Confidence 999999999999999999999999999999887 66667889999999999999999 4889999999998766432 3
Q ss_pred cccccCCCCCChhHHHHHHhhcchhHHhhhhh--hhcCCCCCchhhhHHHHHHHHHHHhh-CCCCEEEeecceeecccCC
Q psy6053 256 LYEKPYPPPTDPHKLIERVEMMSEDTVEKRAK--EFLGEFPNSYAYTKCLSEGLVVEAMN-NGMPCLMLRPSIIIPVWRE 332 (614)
Q Consensus 256 i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p--~~~~~~pn~Y~~SK~~aE~lv~~~~~-~glp~~IvRp~~I~g~~~~ 332 (614)
+.|+... ....+ .....++++|+.||+.+|++++++.. .|++++|+|||+|||+...
T Consensus 226 ~~E~~~~--------------------~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v~G~~~~ 285 (478)
T 4dqv_A 226 FTEDADI--------------------RVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTSY 285 (478)
T ss_dssp CCSSSCH--------------------HHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECCSSS
T ss_pred cCCcccc--------------------cccCcccccccccccchHHHHHHHHHHHHHHHHHhCCCeEEEECceeeCCCcc
Confidence 4443211 11111 12234568899999999999999876 6999999999999998541
Q ss_pred CCccccCCCCc-hHHHHHH-HhcCceee-EeeC------CCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEeccCC
Q psy6053 333 PLPGWTDNING-PTGLLIG-AGKGVIRT-MFCD------NTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLTSSQ 403 (614)
Q Consensus 333 p~~gw~d~~~g-~~~~~~~-~~~g~~~~-~~~~------~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~~~~ 403 (614)
. ..| +... ...++.. ...|..+. +++. ++..++++||||+|++++.++.+........+++||++++.
T Consensus 286 ~-g~~--~~~~~~~~l~~~~~~~g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~~~~~~ynv~~~~ 362 (478)
T 4dqv_A 286 A-GQL--NMSDWVTRMVLSLMATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYHVMNPH 362 (478)
T ss_dssp S-SCC--CTTBHHHHHHHHHHHHCEEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCCCSEEEEEESCCC
T ss_pred C-CcC--CHHHHHHHHHHHHHHcCcccccccccccccccccceeeeeeHHHHHHHHHHHHhhcccCCCCCCceEEecCCC
Confidence 1 001 1111 1123322 23344322 2221 26789999999999999999886321112367899999993
Q ss_pred cccccHHHHHHHHhhhccccc
Q psy6053 404 EWQVSWQEIIDIGKSIVTTEV 424 (614)
Q Consensus 404 ~~~it~~e~~~~~~~~~g~~~ 424 (614)
.++++|.|+++.+.+. |.+.
T Consensus 363 ~~~~s~~el~~~l~~~-g~~~ 382 (478)
T 4dqv_A 363 DDGIGLDEYVDWLIEA-GYPI 382 (478)
T ss_dssp CSSCSHHHHHHHHHHT-TCSC
T ss_pred CCCcCHHHHHHHHHHc-CCCc
Confidence 3349999999999997 8754
No 9
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=100.00 E-value=8.6e-33 Score=288.25 Aligned_cols=304 Identities=17% Similarity=0.220 Sum_probs=219.0
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCCCC
Q psy6053 103 KTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAEAD 182 (614)
Q Consensus 103 ~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~~~ 182 (614)
|+|||||||||||++|+++|+++|++ |+++.|...... + . ...+++++.+|++++
T Consensus 2 ~~ilVtGatG~iG~~l~~~L~~~g~~---V~~~~r~~~~~~--~-------------------~-~~~~~~~~~~D~~~~ 56 (330)
T 2c20_A 2 NSILICGGAGYIGSHAVKKLVDEGLS---VVVVDNLQTGHE--D-------------------A-ITEGAKFYNGDLRDK 56 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCE---EEEEECCSSCCG--G-------------------G-SCTTSEEEECCTTCH
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCE---EEEEeCCCcCch--h-------------------h-cCCCcEEEECCCCCH
Confidence 78999999999999999999999865 899998754321 0 0 223688999999986
Q ss_pred CCCCCHHHHHHHhc--cccEEEEcccccChh---HHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEeCceeccCC--cc
Q psy6053 183 ELAIKESDRQLLAS--EVDIMIHGAATIRFD---EALKKAVLLNTRGTKMMLSLAKEMKHLELFVHISTAYCHLQE--KV 255 (614)
Q Consensus 183 ~lGLs~~~~~~l~~--~vd~ViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vST~~~~~~~--~~ 255 (614)
+ .+.++++ ++|+|||+||..... ......+++|+.||.+++++|++. ++++|||+||.++++.. .+
T Consensus 57 ~------~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~v~~Ss~~~~~~~~~~~ 129 (330)
T 2c20_A 57 A------FLRDVFTQENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEF-KVDKFIFSSTAATYGEVDVDL 129 (330)
T ss_dssp H------HHHHHHHHSCEEEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEECCGGGGCSCSSSS
T ss_pred H------HHHHHHhhcCCCEEEECCcccCccccccCHHHHHHHHhHHHHHHHHHHHHc-CCCEEEEeCCceeeCCCCCCC
Confidence 5 7888888 899999999987643 345678899999999999999994 88999999999877643 25
Q ss_pred cccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh-CCCCEEEeecceeecccCCCC
Q psy6053 256 LYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN-NGMPCLMLRPSIIIPVWREPL 334 (614)
Q Consensus 256 i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~-~glp~~IvRp~~I~g~~~~p~ 334 (614)
++|+..+.| .+.|+.||+.+|++++.+.. .|++++++||+.|||+.....
T Consensus 130 ~~E~~~~~~-----------------------------~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~ 180 (330)
T 2c20_A 130 ITEETMTNP-----------------------------TNTYGETKLAIEKMLHWYSQASNLRYKIFRYFNVAGATPNGI 180 (330)
T ss_dssp BCTTSCCCC-----------------------------SSHHHHHHHHHHHHHHHHHHTSSCEEEEEECSEEECCCTTCS
T ss_pred CCcCCCCCC-----------------------------CChHHHHHHHHHHHHHHHHHHhCCcEEEEecCcccCCCCcCc
Confidence 666533222 27899999999999999876 589999999999999975433
Q ss_pred ccccCC-CCchHHHHHHHhcC--ceeeEee------CCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEeccCCcc
Q psy6053 335 PGWTDN-INGPTGLLIGAGKG--VIRTMFC------DNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLTSSQEW 405 (614)
Q Consensus 335 ~gw~d~-~~g~~~~~~~~~~g--~~~~~~~------~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~~~~~~ 405 (614)
.|..+. .......+.....+ ....+++ +++..++++||+|+|++++.++..... ...+++||++++ +
T Consensus 181 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~~~~~~~--~~~~~~~ni~~~--~ 256 (330)
T 2c20_A 181 IGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHVEDLVAAHFLGLKDLQN--GGESDFYNLGNG--N 256 (330)
T ss_dssp SCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSSSCEECEEEHHHHHHHHHHHHHHHHT--TCCCEEEECCCT--T
T ss_pred cccccccccchHHHHHHHHhhcCCCeEEeCCccccCCCceeEeeEeHHHHHHHHHHHHhcccc--CCCCCeEEeCCC--C
Confidence 332211 12223333333332 2233444 678899999999999999999876542 013689999998 8
Q ss_pred cccHHHHHHHHhhhcccccCCCCccccCCcccccchhHHHHHHHHHhhhHHHHHHHHHHHhCCChHHHHHHHHHHHHHhh
Q psy6053 406 QVSWQEIIDIGKSIVTTEVPLNGCVWYPGGSMKSNRLLHQICVIFFHMIPAYFLDAIIFLSGNKPCLVKIQDRINKGFEV 485 (614)
Q Consensus 406 ~it~~e~~~~~~~~~g~~~p~~~~~~~p~~~~~~~~~~~~~~~~~~~~~pa~~~d~~~~~~G~~P~~~~l~~ki~~~~~~ 485 (614)
++|+.|+++.+.+.+|.+.|... .|......... ..-.+.+.+.+||+|....+.+.+.+ .
T Consensus 257 ~~s~~e~~~~i~~~~g~~~~~~~---~~~~~~~~~~~-------------~~d~~k~~~~lG~~p~~~~l~~~l~~---~ 317 (330)
T 2c20_A 257 GFSVKEIVDAVREVTNHEIPAEV---APRRAGDPARL-------------VASSQKAKEKLGWDPRYVNVKTIIEH---A 317 (330)
T ss_dssp CBCHHHHHHHHHHHTTSCCCEEE---ECCCSSCCSEE-------------CBCCHHHHHHHCCCCSCCCHHHHHHH---H
T ss_pred CccHHHHHHHHHHHhCCCCceee---CCCCCCccccc-------------ccCHHHHHHHhCCCCccCCHHHHHHH---H
Confidence 89999999999999887655431 12110000000 00123445678999976456677766 4
Q ss_pred hhhhh
Q psy6053 486 FEYYA 490 (614)
Q Consensus 486 ~~~f~ 490 (614)
++||.
T Consensus 318 ~~~~~ 322 (330)
T 2c20_A 318 WNWHQ 322 (330)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 45554
No 10
>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}
Probab=100.00 E-value=1.4e-33 Score=291.50 Aligned_cols=295 Identities=13% Similarity=0.046 Sum_probs=214.1
Q ss_pred ccCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCC
Q psy6053 99 TFTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGD 178 (614)
Q Consensus 99 ~~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gD 178 (614)
++++|+|||||||||||++|+++|++.|+ +... ...+++.+.+|
T Consensus 3 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~---------~~~~---------------------------~~~~~~~~~~D 46 (319)
T 4b8w_A 3 YFQSMRILVTGGSGLVGKAIQKVVADGAG---------LPGE---------------------------DWVFVSSKDAD 46 (319)
T ss_dssp CCCCCEEEEETCSSHHHHHHHHHHHTTTC---------CTTC---------------------------EEEECCTTTCC
T ss_pred cccCCeEEEECCCcHHHHHHHHHHHhcCC---------cccc---------------------------cccccCceecc
Confidence 35789999999999999999999999986 1110 12345556899
Q ss_pred CCCCCCCCCHHHHHHHhcc--ccEEEEcccccCh----hHHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEeCceeccC
Q psy6053 179 AEADELAIKESDRQLLASE--VDIMIHGAATIRF----DEALKKAVLLNTRGTKMMLSLAKEMKHLELFVHISTAYCHLQ 252 (614)
Q Consensus 179 l~~~~lGLs~~~~~~l~~~--vd~ViH~AA~v~~----~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vST~~~~~~ 252 (614)
+++++ .+..++++ +|+|||+||.+.. .......+++|+.||.+++++|++. ++++|||+||.++++.
T Consensus 47 ~~d~~------~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~-~~~~~v~~SS~~vyg~ 119 (319)
T 4b8w_A 47 LTDTA------QTRALFEKVQPTHVIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEV-GARKVVSCLSTCIFPD 119 (319)
T ss_dssp TTSHH------HHHHHHHHSCCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHT-TCSEEEEECCGGGSCS
T ss_pred cCCHH------HHHHHHhhcCCCEEEECceecccccccccCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEEcchhhcCC
Confidence 99865 78888887 9999999998752 2345678899999999999999995 8999999999988765
Q ss_pred Cc--ccccccCC-CCCChhHHHHHHhhcchhHHhhhhhhhcCCCCC-chhhhHHHHHHHHHHHhh-CCCCEEEeecceee
Q psy6053 253 EK--VLYEKPYP-PPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPN-SYAYTKCLSEGLVVEAMN-NGMPCLMLRPSIII 327 (614)
Q Consensus 253 ~~--~i~E~~~~-~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn-~Y~~SK~~aE~lv~~~~~-~glp~~IvRp~~I~ 327 (614)
.. +++|+... .|.. ..+ +|+.||+.+|++++.+.+ .|++++|+||+.||
T Consensus 120 ~~~~~~~E~~~~~~~~~--------------------------p~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~ 173 (319)
T 4b8w_A 120 KTTYPIDETMIHNGPPH--------------------------NSNFGYSYAKRMIDVQNRAYFQQYGCTFTAVIPTNVF 173 (319)
T ss_dssp SCCSSBCGGGGGBSCCC--------------------------SSSHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEE
T ss_pred CCCCCccccccccCCCC--------------------------CCcchHHHHHHHHHHHHHHHHHhhCCCEEEEeecccc
Confidence 43 55665310 0000 013 599999999999998776 69999999999999
Q ss_pred cccCCCCccccCCCCchHHHHHH----HhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEeccCC
Q psy6053 328 PVWREPLPGWTDNINGPTGLLIG----AGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLTSSQ 403 (614)
Q Consensus 328 g~~~~p~~gw~d~~~g~~~~~~~----~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~~~~ 403 (614)
|+...+..+. + .....++.. +..|....++++++..++++||+|+|++++.++.+... ..+++||++++
T Consensus 174 Gp~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~---~~~~~~ni~~~- 246 (319)
T 4b8w_A 174 GPHDNFNIED--G-HVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIYSLDLAQLFIWVLREYNE---VEPIILSVGEE- 246 (319)
T ss_dssp CTTCCCCTTT--S-CHHHHHHHHHHHHHHHTCCEEEESCSCCEECEEEHHHHHHHHHHHHHHCCC---SSCEEECCCGG-
T ss_pred CCCCCCCCcc--c-cccHHHHHHHHHHhccCCceEEeCCCCeeEEEEeHHHHHHHHHHHHhcccc---CCceEEEecCC-
Confidence 9987542211 0 112233444 56677667788999999999999999999999987432 25679999998
Q ss_pred cccccHHHHHHHHhhhcccccCCCCccccCCcccccchhHHHHHHHHHhhhHHHHHHHHHHHhCCChHHHHHHHHHHHHH
Q psy6053 404 EWQVSWQEIIDIGKSIVTTEVPLNGCVWYPGGSMKSNRLLHQICVIFFHMIPAYFLDAIIFLSGNKPCLVKIQDRINKGF 483 (614)
Q Consensus 404 ~~~it~~e~~~~~~~~~g~~~p~~~~~~~p~~~~~~~~~~~~~~~~~~~~~pa~~~d~~~~~~G~~P~~~~l~~ki~~~~ 483 (614)
+++|+.|+++.+.+.+|.+.++......+... ... ..-.+.+.+.+||+|.. .+.+.+.+
T Consensus 247 -~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~---~~~-------------~~d~~k~~~~lg~~p~~-~~~~~l~~-- 306 (319)
T 4b8w_A 247 -DEVSIKEAAEAVVEAMDFHGEVTFDTTKSDGQ---FKK-------------TASNSKLRTYLPDFRFT-PFKQAVKE-- 306 (319)
T ss_dssp -GCEEHHHHHHHHHHHTTCCSCEEEETTSCCCC---SCC-------------CBCCHHHHHHCTTCCCC-CHHHHHHH--
T ss_pred -CceeHHHHHHHHHHHhCCCCcEEeCCCCCcCc---ccc-------------cCCHHHHHHhcCCCCCC-CHHHHHHH--
Confidence 89999999999999988765543211111110 000 01124456779999976 57777776
Q ss_pred hhhhhhh
Q psy6053 484 EVFEYYA 490 (614)
Q Consensus 484 ~~~~~f~ 490 (614)
.++||.
T Consensus 307 -~~~~~~ 312 (319)
T 4b8w_A 307 -TCAWFT 312 (319)
T ss_dssp -HHHHHH
T ss_pred -HHHHHH
Confidence 455554
No 11
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=100.00 E-value=2.6e-33 Score=289.83 Aligned_cols=302 Identities=15% Similarity=0.146 Sum_probs=214.1
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCCCC
Q psy6053 103 KTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAEAD 182 (614)
Q Consensus 103 ~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~~~ 182 (614)
|+|||||||||||++|+++|+++|++ |+++.|........ ...+++++.+|++++
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~---V~~~~r~~~~~~~~----------------------~~~~~~~~~~Dl~d~ 55 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELGYE---VVVVDNLSSGRREF----------------------VNPSAELHVRDLKDY 55 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCE---EEEECCCSSCCGGG----------------------SCTTSEEECCCTTST
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCE---EEEEeCCCCCchhh----------------------cCCCceEEECccccH
Confidence 68999999999999999999999876 89999976542110 235688999999987
Q ss_pred CCCCCHHHHHHHhccccEEEEcccccCh---hHHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEeCceeccCCc--ccc
Q psy6053 183 ELAIKESDRQLLASEVDIMIHGAATIRF---DEALKKAVLLNTRGTKMMLSLAKEMKHLELFVHISTAYCHLQEK--VLY 257 (614)
Q Consensus 183 ~lGLs~~~~~~l~~~vd~ViH~AA~v~~---~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vST~~~~~~~~--~i~ 257 (614)
+ +..++++ |+|||+||.... .......+++|+.||.+++++|++. ++++|||+||.++++... +++
T Consensus 56 ~-------~~~~~~~-d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~iv~~SS~~vyg~~~~~~~~ 126 (312)
T 3ko8_A 56 S-------WGAGIKG-DVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQT-GVRTVVFASSSTVYGDADVIPTP 126 (312)
T ss_dssp T-------TTTTCCC-SEEEECCSSCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEEEGGGGCSCSSSSBC
T ss_pred H-------HHhhcCC-CEEEECCCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEeCcHHHhCCCCCCCCC
Confidence 5 3344555 999999996432 2345678899999999999999995 889999999998776543 566
Q ss_pred cccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh-CCCCEEEeecceeecccCCCCcc
Q psy6053 258 EKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN-NGMPCLMLRPSIIIPVWREPLPG 336 (614)
Q Consensus 258 E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~-~glp~~IvRp~~I~g~~~~p~~g 336 (614)
|+....| .+.|+.||+.+|++++.+.. .|++++++||+.|||+...+
T Consensus 127 e~~~~~p-----------------------------~~~Y~~sK~~~e~~~~~~~~~~g~~~~~lrp~~v~g~~~~~--- 174 (312)
T 3ko8_A 127 EEEPYKP-----------------------------ISVYGAAKAAGEVMCATYARLFGVRCLAVRYANVVGPRLRH--- 174 (312)
T ss_dssp TTSCCCC-----------------------------CSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCS---
T ss_pred CCCCCCC-----------------------------CChHHHHHHHHHHHHHHHHHHhCCCEEEEeeccccCcCCCC---
Confidence 6533333 27899999999999998876 69999999999999986532
Q ss_pred ccCCCCchHHHHHHHhcC-ceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEeccCCcccccHHHHHHH
Q psy6053 337 WTDNINGPTGLLIGAGKG-VIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLTSSQEWQVSWQEIIDI 415 (614)
Q Consensus 337 w~d~~~g~~~~~~~~~~g-~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~~~~~~~it~~e~~~~ 415 (614)
.....++..+..+ ......++++..+++++|+|+|++++.++.+... ....+++||++++ +++++.|+++.
T Consensus 175 -----~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~-~~~~~~~~ni~~~--~~~s~~e~~~~ 246 (312)
T 3ko8_A 175 -----GVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKKFEE-MDAPFLALNVGNV--DAVRVLDIAQI 246 (312)
T ss_dssp -----SHHHHHHHHHHHCTTEEEEC----CEECEEEHHHHHHHHHHHHHHHHH-SCCSEEEEEESCS--SCEEHHHHHHH
T ss_pred -----ChHHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHHHHHHHHHHhccc-cCCCCcEEEEcCC--CceeHHHHHHH
Confidence 1223455555555 3444678889999999999999999999987321 0126789999998 88999999999
Q ss_pred HhhhcccccCCCCccccCCcccccchhHHHHHHHHHhhhH--HHHHHHHHHHhCCChHHHHHHHHHHHHHhhhhhhhcce
Q psy6053 416 GKSIVTTEVPLNGCVWYPGGSMKSNRLLHQICVIFFHMIP--AYFLDAIIFLSGNKPCLVKIQDRINKGFEVFEYYANNQ 493 (614)
Q Consensus 416 ~~~~~g~~~p~~~~~~~p~~~~~~~~~~~~~~~~~~~~~p--a~~~d~~~~~~G~~P~~~~l~~ki~~~~~~~~~f~~~~ 493 (614)
+.+.+|.+.++.. .|...... .+ ....+ ..-.+.+.+.+||+|+. .+.+.+.+ .++|+..+.
T Consensus 247 i~~~~g~~~~~~~---~~~~~~~~-~~--------~~~~~~~~~d~~k~~~~lG~~p~~-~~~~~l~~---~~~~~~~~~ 310 (312)
T 3ko8_A 247 VAEVLGLRPEIRL---VPSTPDGR-GW--------PGDVKYMTLAVTKLMKLTGWRPTM-TSAEAVKK---TAEDLAKEL 310 (312)
T ss_dssp HHHHHTCCCEEEE---C-------------------CCCSEECBCCHHHHHHHCCCCSS-CHHHHHHH---HHHHHHHHH
T ss_pred HHHHhCCCCceee---cCcccccc-CC--------CCCccccccCHHHHHHHhCCCCCC-CHHHHHHH---HHHHHHhhh
Confidence 9999887643321 11100000 00 00000 01123445788999986 56777776 556665544
Q ss_pred E
Q psy6053 494 W 494 (614)
Q Consensus 494 w 494 (614)
|
T Consensus 311 ~ 311 (312)
T 3ko8_A 311 W 311 (312)
T ss_dssp C
T ss_pred c
Confidence 4
No 12
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=100.00 E-value=2.3e-32 Score=287.21 Aligned_cols=310 Identities=15% Similarity=0.093 Sum_probs=218.1
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCC-------cCHHHHHHHHHhChhhHHhhhhccccccCeEEE
Q psy6053 102 GKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKG-------KNARQRIEELFASPLFNLLKSVHGQKIIDKVLP 174 (614)
Q Consensus 102 ~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~-------~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~ 174 (614)
+|+|||||||||||++|+++|++.|++ |++++|.... ....+++.+. ...++.+
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~---V~~~~r~~~~~r~~~~~~~~~~~l~~~----------------~~~~~~~ 62 (348)
T 1ek6_A 2 AEKVLVTGGAGYIGSHTVLELLEAGYL---PVVIDNFHNAFRGGGSLPESLRRVQEL----------------TGRSVEF 62 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTCC---EEEEECSSSSCBCSSSSBHHHHHHHHH----------------HTCCCEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEecCCcccccccccHHHHHHHHhc----------------cCCceEE
Confidence 479999999999999999999999977 8999986543 1122222211 1246889
Q ss_pred EeCCCCCCCCCCCHHHHHHHhc--cccEEEEcccccChh---HHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEeCcee
Q psy6053 175 ISGDAEADELAIKESDRQLLAS--EVDIMIHGAATIRFD---EALKKAVLLNTRGTKMMLSLAKEMKHLELFVHISTAYC 249 (614)
Q Consensus 175 v~gDl~~~~lGLs~~~~~~l~~--~vd~ViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vST~~~ 249 (614)
+.+|+++++ .++.+++ ++|+|||+||..... +.....+++|+.||.+++++|++. ++++|||+||.++
T Consensus 63 ~~~D~~~~~------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~iv~~SS~~~ 135 (348)
T 1ek6_A 63 EEMDILDQG------ALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAH-GVKNLVFSSSATV 135 (348)
T ss_dssp EECCTTCHH------HHHHHHHHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEEEEGGG
T ss_pred EECCCCCHH------HHHHHHHhcCCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHh-CCCEEEEECcHHH
Confidence 999999865 7888887 799999999987643 345678899999999999999994 8899999999987
Q ss_pred ccCC--cccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhhC--CCCEEEeecce
Q psy6053 250 HLQE--KVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMNN--GMPCLMLRPSI 325 (614)
Q Consensus 250 ~~~~--~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~~--glp~~IvRp~~ 325 (614)
++.. .+++|+..+.| ..+.|+.||+.+|++++.+... +++++++||++
T Consensus 136 ~g~~~~~~~~E~~~~~p----------------------------~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~ 187 (348)
T 1ek6_A 136 YGNPQYLPLDEAHPTGG----------------------------CTNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFN 187 (348)
T ss_dssp GCSCSSSSBCTTSCCCC----------------------------CSSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECE
T ss_pred hCCCCCCCcCCCCCCCC----------------------------CCCchHHHHHHHHHHHHHHHhcCCCcceEEEeecc
Confidence 7643 35566533222 1278999999999999987642 49999999999
Q ss_pred eecccCCCCccccCC--CCchHHHHHHHh--cCceeeEee------CCCccccceeHHHHHHHHHHHHHhhhhcCCCC-c
Q psy6053 326 IIPVWREPLPGWTDN--INGPTGLLIGAG--KGVIRTMFC------DNTGYADFLPVDITINGIFVAIWAYLSQKEHR-Q 394 (614)
Q Consensus 326 I~g~~~~p~~gw~d~--~~g~~~~~~~~~--~g~~~~~~~------~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~-~ 394 (614)
|||+......|.... .......+.... .+....+++ +++..++++||+|+|++++.++.+... .. +
T Consensus 188 v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~---~~g~ 264 (348)
T 1ek6_A 188 PTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKE---QCGC 264 (348)
T ss_dssp EECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTT---TCCE
T ss_pred ccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCeEEeCCcccCCCCceEEeeEEHHHHHHHHHHHHhcccc---cCCc
Confidence 999865332222111 122233333333 344334444 577889999999999999999876521 13 3
Q ss_pred cEEEeccCCcccccHHHHHHHHhhhcccccCCCCccccCCcccccchhHHHHHHHHHhhhHHHHHHHHHHHhCCChHHHH
Q psy6053 395 SIVHLTSSQEWQVSWQEIIDIGKSIVTTEVPLNGCVWYPGGSMKSNRLLHQICVIFFHMIPAYFLDAIIFLSGNKPCLVK 474 (614)
Q Consensus 395 ~vyni~~~~~~~it~~e~~~~~~~~~g~~~p~~~~~~~p~~~~~~~~~~~~~~~~~~~~~pa~~~d~~~~~~G~~P~~~~ 474 (614)
++||++++ +++|+.|+++.+.+.+|.+.|... .|......... ..-.+.+.+.+||+|.. .
T Consensus 265 ~~~ni~~~--~~~s~~e~~~~i~~~~g~~~~~~~---~~~~~~~~~~~-------------~~d~~k~~~~lG~~p~~-~ 325 (348)
T 1ek6_A 265 RIYNLGTG--TGYSVLQMVQAMEKASGKKIPYKV---VARREGDVAAC-------------YANPSLAQEELGWTAAL-G 325 (348)
T ss_dssp EEEEECCS--CCEEHHHHHHHHHHHHCSCCCEEE---ECCCTTCCSEE-------------CBCCHHHHHTTCCCCCC-C
T ss_pred eEEEeCCC--CCccHHHHHHHHHHHhCCCCceee---CCCCCccchhh-------------ccCHHHHHHhcCCCCCC-C
Confidence 79999998 889999999999999887655421 22110000000 01123446789999976 3
Q ss_pred HHHHHHHHHhhhhhhh
Q psy6053 475 IQDRINKGFEVFEYYA 490 (614)
Q Consensus 475 l~~ki~~~~~~~~~f~ 490 (614)
+.+.+.+ .++||.
T Consensus 326 l~~~l~~---~~~w~~ 338 (348)
T 1ek6_A 326 LDRMCED---LWRWQK 338 (348)
T ss_dssp HHHHHHH---HHHHHH
T ss_pred HHHHHHH---HHHHHH
Confidence 6677776 455664
No 13
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=100.00 E-value=2e-32 Score=288.55 Aligned_cols=313 Identities=18% Similarity=0.160 Sum_probs=225.9
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
+++|+|||||||||||++|+++|++.|++ |++++|...+. .++++++.+ +.......++.++.+|+
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~---V~~~~r~~~~~--~~~~~~~~~---------~~~~~~~~~~~~~~~Dl 90 (352)
T 1sb8_A 25 AQPKVWLITGVAGFIGSNLLETLLKLDQK---VVGLDNFATGH--QRNLDEVRS---------LVSEKQWSNFKFIQGDI 90 (352)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEECCSSCC--HHHHHHHHH---------HSCHHHHTTEEEEECCT
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHHCCCE---EEEEeCCCccc--hhhHHHHhh---------hcccccCCceEEEECCC
Confidence 45789999999999999999999999875 89999976432 223332211 00000125789999999
Q ss_pred CCCCCCCCHHHHHHHhccccEEEEcccccChh---HHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEeCceeccCCc--
Q psy6053 180 EADELAIKESDRQLLASEVDIMIHGAATIRFD---EALKKAVLLNTRGTKMMLSLAKEMKHLELFVHISTAYCHLQEK-- 254 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~~vd~ViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vST~~~~~~~~-- 254 (614)
++++ ++..+++++|+|||+||..... ..+...+++|+.||.+++++|++. ++++|||+||.++++...
T Consensus 91 ~d~~------~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~v~~SS~~~~~~~~~~ 163 (352)
T 1sb8_A 91 RNLD------DCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDA-KVQSFTYAASSSTYGDHPGL 163 (352)
T ss_dssp TSHH------HHHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TCSEEEEEEEGGGGTTCCCS
T ss_pred CCHH------HHHHHhcCCCEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEeccHHhcCCCCCC
Confidence 9865 7889999999999999987643 345678899999999999999994 889999999998876543
Q ss_pred ccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh-CCCCEEEeecceeecccCCC
Q psy6053 255 VLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN-NGMPCLMLRPSIIIPVWREP 333 (614)
Q Consensus 255 ~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~-~glp~~IvRp~~I~g~~~~p 333 (614)
+++|+..+.| .+.|+.||+.+|++++.+.. .|++++++||+.|||+...+
T Consensus 164 ~~~E~~~~~~-----------------------------~~~Y~~sK~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~ 214 (352)
T 1sb8_A 164 PKVEDTIGKP-----------------------------LSPYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDP 214 (352)
T ss_dssp SBCTTCCCCC-----------------------------CSHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCC
T ss_pred CCCCCCCCCC-----------------------------CChhHHHHHHHHHHHHHHHHHcCCCEEEEEECceeCcCCCC
Confidence 5566543322 27899999999999988765 58999999999999987643
Q ss_pred CccccCCCCc-hHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEeccCCcccccHHHH
Q psy6053 334 LPGWTDNING-PTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLTSSQEWQVSWQEI 412 (614)
Q Consensus 334 ~~gw~d~~~g-~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~~~~~~~it~~e~ 412 (614)
...+ .+ ...++..+..|....++++++..+++++++|+|++++.++..... ..+++||++++ +++|+.|+
T Consensus 215 ~~~~----~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~~---~~~~~~ni~~~--~~~s~~e~ 285 (352)
T 1sb8_A 215 NGAY----AAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAATAGLD---ARNQVYNIAVG--GRTSLNQL 285 (352)
T ss_dssp CSTT----CCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCCGG---GCSEEEEESCS--CCEEHHHH
T ss_pred Ccch----hhHHHHHHHHHHCCCCcEEeCCCCceEeeEEHHHHHHHHHHHHhcccc---CCCceEEeCCC--CCccHHHH
Confidence 2111 12 223555566676656678889999999999999999988865211 25789999998 88999999
Q ss_pred HHHHhhhc---ccccCCCCccccCCcccccchhHHHHHHHHHhhhHHHHHHHHHHHhCCChHHHHHHHHHHHHHhhhhhh
Q psy6053 413 IDIGKSIV---TTEVPLNGCVWYPGGSMKSNRLLHQICVIFFHMIPAYFLDAIIFLSGNKPCLVKIQDRINKGFEVFEYY 489 (614)
Q Consensus 413 ~~~~~~~~---g~~~p~~~~~~~p~~~~~~~~~~~~~~~~~~~~~pa~~~d~~~~~~G~~P~~~~l~~ki~~~~~~~~~f 489 (614)
++.+.+.+ |.+.+.. +.+.|........ ...-.+.+.+.+||+|.. .+.+.+.+ .++||
T Consensus 286 ~~~i~~~~~~~g~~~~~~-~~~~~~~~~~~~~-------------~~~d~~k~~~~lG~~p~~-~~~e~l~~---~~~~~ 347 (352)
T 1sb8_A 286 FFALRDGLAENGVSYHRE-PVYRDFREGDVRH-------------SLADISKAAKLLGYAPKY-DVSAGVAL---AMPWY 347 (352)
T ss_dssp HHHHHHHHHHTTCCCCCC-CEEECCCTTCCSB-------------CCBCCHHHHHHTCCCCCC-CHHHHHHH---HHHHH
T ss_pred HHHHHHHHHhcCCCCCCC-ceecCCCccchhh-------------ccCCHHHHHHHhCCCCCC-CHHHHHHH---HHHHH
Confidence 99999998 8765432 1122211000000 001124456789999976 56677776 44454
No 14
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=100.00 E-value=4.2e-33 Score=294.96 Aligned_cols=309 Identities=16% Similarity=0.114 Sum_probs=222.4
Q ss_pred cCCcEEEEecccccccHHHHHHHHh--hCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILR--KSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISG 177 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~--~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~g 177 (614)
+++|+|||||||||||++|+++|++ .|++ |++++|.........+..+.+. ..... ...++.++.+
T Consensus 8 ~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~---V~~~~r~~~~~~~~~~~~~~~~--------~~~~~-~~~~~~~~~~ 75 (362)
T 3sxp_A 8 LENQTILITGGAGFVGSNLAFHFQENHPKAK---VVVLDKFRSNTLFSNNRPSSLG--------HFKNL-IGFKGEVIAA 75 (362)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHHCTTSE---EEEEECCCCC-------CCCCC--------CGGGG-TTCCSEEEEC
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHhhCCCCe---EEEEECCCccccccccchhhhh--------hhhhc-cccCceEEEC
Confidence 5689999999999999999999999 7765 9999997653211111100000 00000 2346789999
Q ss_pred CCCCCCCCCCHHHHHHH-hccccEEEEcccccCh-hHHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEeCceeccCCc-
Q psy6053 178 DAEADELAIKESDRQLL-ASEVDIMIHGAATIRF-DEALKKAVLLNTRGTKMMLSLAKEMKHLELFVHISTAYCHLQEK- 254 (614)
Q Consensus 178 Dl~~~~lGLs~~~~~~l-~~~vd~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vST~~~~~~~~- 254 (614)
|+++++ +++.+ ..++|+|||+||.+.. ...+...+++|+.||.+++++|++. +++ |||+||+++++...
T Consensus 76 Dl~d~~------~~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~-~~~-~V~~SS~~vyg~~~~ 147 (362)
T 3sxp_A 76 DINNPL------DLRRLEKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSK-KAK-VIYASSAGVYGNTKA 147 (362)
T ss_dssp CTTCHH------HHHHHTTSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHT-TCE-EEEEEEGGGGCSCCS
T ss_pred CCCCHH------HHHHhhccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHc-CCc-EEEeCcHHHhCCCCC
Confidence 999876 78888 7899999999997764 3556788999999999999999994 776 99999987776543
Q ss_pred ccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhhCCCCEEEeecceeecccCCCC
Q psy6053 255 VLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMNNGMPCLMLRPSIIIPVWREPL 334 (614)
Q Consensus 255 ~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~~glp~~IvRp~~I~g~~~~p~ 334 (614)
+++|+....| .+.|+.||+.+|++++.+.. .++++++||++|||+...+.
T Consensus 148 ~~~E~~~~~p-----------------------------~~~Y~~sK~~~E~~~~~~~~-~~~~~~lR~~~v~Gp~~~~~ 197 (362)
T 3sxp_A 148 PNVVGKNESP-----------------------------ENVYGFSKLCMDEFVLSHSN-DNVQVGLRYFNVYGPREFYK 197 (362)
T ss_dssp SBCTTSCCCC-----------------------------SSHHHHHHHHHHHHHHHTTT-TSCEEEEEECSEESTTCGGG
T ss_pred CCCCCCCCCC-----------------------------CChhHHHHHHHHHHHHHHhc-cCCEEEEEeCceeCcCCCCC
Confidence 5666543333 27899999999999999987 49999999999999976432
Q ss_pred ccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEeccCCcccccHHHHHH
Q psy6053 335 PGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLTSSQEWQVSWQEIID 414 (614)
Q Consensus 335 ~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~~~~~~~it~~e~~~ 414 (614)
..+. .....++..+..|....++++++..+++++|+|+|++++.++.... .+ +||++++ +++++.|+++
T Consensus 198 ~~~~---~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~ai~~~~~~~~-----~g-~~~i~~~--~~~s~~e~~~ 266 (362)
T 3sxp_A 198 EKTA---SMVLQLALGAMAFKEVKLFEFGEQLRDFVYIEDVIQANVKAMKAQK-----SG-VYNVGYS--QARSYNEIVS 266 (362)
T ss_dssp GGGS---CHHHHHHHHHHTTSEEECSGGGCCEEECEEHHHHHHHHHHHTTCSS-----CE-EEEESCS--CEEEHHHHHH
T ss_pred Ccch---hHHHHHHHHHHhCCCeEEECCCCeEEccEEHHHHHHHHHHHHhcCC-----CC-EEEeCCC--CCccHHHHHH
Confidence 1110 1233466667777776667888899999999999999999886542 45 9999999 8999999999
Q ss_pred HHhhhcccccCCCCccccCCc-ccccchhHHHHHHHHHhhhHHHHHHHHHHHhCCChHHHHHHHHHHHHHhhhhhhh
Q psy6053 415 IGKSIVTTEVPLNGCVWYPGG-SMKSNRLLHQICVIFFHMIPAYFLDAIIFLSGNKPCLVKIQDRINKGFEVFEYYA 490 (614)
Q Consensus 415 ~~~~~~g~~~p~~~~~~~p~~-~~~~~~~~~~~~~~~~~~~pa~~~d~~~~~~G~~P~~~~l~~ki~~~~~~~~~f~ 490 (614)
.+.+.+| +.++. +.|.. ..... -...-.+.+.+.+||+|.. .+.+.+.+ .++||.
T Consensus 267 ~i~~~~g-~~~~~---~~~~~~~~~~~-------------~~~~d~~k~~~~lG~~p~~-~l~e~l~~---~~~~~~ 322 (362)
T 3sxp_A 267 ILKEHLG-DFKVT---YIKNPYAFFQK-------------HTQAHIEPTILDLDYTPLY-DLESGIKD---YLPHIH 322 (362)
T ss_dssp HHHHHHC-CCEEE---CCC-------C-------------CCCBCCHHHHHHHCCCCCC-CHHHHHHH---HHHHHT
T ss_pred HHHHHcC-CCceE---ECCCCCcCccc-------------ceecCHHHHHHHhCCCCCC-CHHHHHHH---HHHHHH
Confidence 9999988 54432 22211 00000 0001123445789999987 67777777 455554
No 15
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=100.00 E-value=3.1e-32 Score=282.89 Aligned_cols=289 Identities=15% Similarity=0.091 Sum_probs=213.2
Q ss_pred ccCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCC
Q psy6053 99 TFTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGD 178 (614)
Q Consensus 99 ~~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gD 178 (614)
+.+.|+|||||||||||++|+++|++.|++ |++++|..... . -++.++.+|
T Consensus 9 ~~~~~~vlVTGatG~iG~~l~~~L~~~G~~---V~~~~r~~~~~-------------------------~-l~~~~~~~D 59 (321)
T 2pk3_A 9 HHGSMRALITGVAGFVGKYLANHLTEQNVE---VFGTSRNNEAK-------------------------L-PNVEMISLD 59 (321)
T ss_dssp ----CEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCTTCC-------------------------C-TTEEEEECC
T ss_pred ccCcceEEEECCCChHHHHHHHHHHHCCCE---EEEEecCCccc-------------------------c-ceeeEEECC
Confidence 345689999999999999999999999875 89999976431 1 157889999
Q ss_pred CCCCCCCCCHHHHHHHhcc--ccEEEEcccccChhH---HHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEeCceeccCC
Q psy6053 179 AEADELAIKESDRQLLASE--VDIMIHGAATIRFDE---ALKKAVLLNTRGTKMMLSLAKEMKHLELFVHISTAYCHLQE 253 (614)
Q Consensus 179 l~~~~lGLs~~~~~~l~~~--vd~ViH~AA~v~~~~---~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vST~~~~~~~ 253 (614)
+++++ ++..++++ +|+|||+||...... .+...+++|+.||.+++++|++++++++|||+||.++++..
T Consensus 60 l~d~~------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v~g~~ 133 (321)
T 2pk3_A 60 IMDSQ------RVKKVISDIKPDYIFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEEYGMI 133 (321)
T ss_dssp TTCHH------HHHHHHHHHCCSEEEECCSCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGGGTBSC
T ss_pred CCCHH------HHHHHHHhcCCCEEEEcCcccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHHhcCCC
Confidence 99865 78888876 999999999876432 46778999999999999999886468999999999877643
Q ss_pred ----cccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh-CCCCEEEeecceeec
Q psy6053 254 ----KVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN-NGMPCLMLRPSIIIP 328 (614)
Q Consensus 254 ----~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~-~glp~~IvRp~~I~g 328 (614)
.+++|+....| .+.|+.||+.+|++++.+.. .|++++++||+.|||
T Consensus 134 ~~~~~~~~E~~~~~~-----------------------------~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g 184 (321)
T 2pk3_A 134 LPEESPVSEENQLRP-----------------------------MSPYGVSKASVGMLARQYVKAYGMDIIHTRTFNHIG 184 (321)
T ss_dssp CGGGCSBCTTSCCBC-----------------------------CSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEEC
T ss_pred CCCCCCCCCCCCCCC-----------------------------CCccHHHHHHHHHHHHHHHHHcCCCEEEEEeCcccC
Confidence 35666533222 27899999999999998766 589999999999999
Q ss_pred ccCCCCccccCCCCchHHHHHHHhc---C--ceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEeccCC
Q psy6053 329 VWREPLPGWTDNINGPTGLLIGAGK---G--VIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLTSSQ 403 (614)
Q Consensus 329 ~~~~p~~gw~d~~~g~~~~~~~~~~---g--~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~~~~ 403 (614)
+...+. .....++..+.. | ......++++...++++++|+|++++.++.... .+++||++++
T Consensus 185 ~~~~~~-------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~-----~g~~~~i~~~- 251 (321)
T 2pk3_A 185 PGQSLG-------FVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVRDIVQAYWLLSQYGK-----TGDVYNVCSG- 251 (321)
T ss_dssp TTCCTT-------SHHHHHHHHHHHHHTTSSCSEEEESCSSCEEEEEEHHHHHHHHHHHHHHCC-----TTCEEEESCS-
T ss_pred cCCCCC-------chHHHHHHHHHHHhcCCCCCeEEeCCCCcEEeeEEHHHHHHHHHHHHhCCC-----CCCeEEeCCC-
Confidence 875420 011233444444 5 334456788889999999999999999987642 5689999998
Q ss_pred cccccHHHHHHHHhhhcccccCCCCccccCC--cccccchhHHHHHHHHHhhhHHHHHHHHHHHhCCChHHHHHHHHHHH
Q psy6053 404 EWQVSWQEIIDIGKSIVTTEVPLNGCVWYPG--GSMKSNRLLHQICVIFFHMIPAYFLDAIIFLSGNKPCLVKIQDRINK 481 (614)
Q Consensus 404 ~~~it~~e~~~~~~~~~g~~~p~~~~~~~p~--~~~~~~~~~~~~~~~~~~~~pa~~~d~~~~~~G~~P~~~~l~~ki~~ 481 (614)
.++++.|+++.+.+.+|.+.+.. +.|. ....... ...-.+.+.+.+||+|.. .+.+.+.+
T Consensus 252 -~~~s~~e~~~~i~~~~g~~~~~~---~~p~~~~~~~~~~-------------~~~d~~k~~~~lG~~p~~-~~~e~l~~ 313 (321)
T 2pk3_A 252 -IGTRIQDVLDLLLAMANVKIDTE---LNPLQLRPSEVPT-------------LIGSNKRLKDSTGWKPRI-PLEKSLFE 313 (321)
T ss_dssp -CEEEHHHHHHHHHHHSSSCCEEE---ECGGGCCSSCCSB-------------CCBCCHHHHHHHCCCCCS-CHHHHHHH
T ss_pred -CCeeHHHHHHHHHHHhCCCCcee---eccccCCCcccch-------------hccCHHHHHHHcCCCcCC-CHHHHHHH
Confidence 88999999999999988764432 1121 0000000 001124456778999986 67777776
Q ss_pred H
Q psy6053 482 G 482 (614)
Q Consensus 482 ~ 482 (614)
.
T Consensus 314 ~ 314 (321)
T 2pk3_A 314 I 314 (321)
T ss_dssp H
T ss_pred H
Confidence 3
No 16
>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*
Probab=100.00 E-value=2e-32 Score=293.06 Aligned_cols=322 Identities=13% Similarity=0.130 Sum_probs=220.6
Q ss_pred CcEEEEecccccccHHHHHHHH-hhCCCccEEEEEEccCCCc------CHHHHHHHHHhChhhHHhhhhccccccCe---
Q psy6053 102 GKTLFMTGASGFLGKVLLEKIL-RKSPNVKKIYILMRQKKGK------NARQRIEELFASPLFNLLKSVHGQKIIDK--- 171 (614)
Q Consensus 102 ~~~VLITGaTGFlG~~Ll~~Ll-~~g~~v~~V~~LvR~~~~~------~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~--- 171 (614)
+|+|||||||||||++|+++|+ +.|++ |+++.|..... ...+++.+.++ .+.... ...+
T Consensus 2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~---V~~~~r~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~---~~~~~~~ 70 (397)
T 1gy8_A 2 HMRVLVCGGAGYIGSHFVRALLRDTNHS---VVIVDSLVGTHGKSDHVETRENVARKLQ-----QSDGPK---PPWADRY 70 (397)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCCCE---EEEEECCTTTTTCCTTSCCHHHHHHHHH-----HSCSSC---CTTTTCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHhCCCE---EEEEecCCcccccccccchHHHHHHHHH-----Hhhccc---cccCCce
Confidence 5799999999999999999999 98865 89999975432 00223322111 000000 0124
Q ss_pred EEEEeCCCCCCCCCCCHHHHHHHhc--c-ccEEEEcccccChh---HHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEe
Q psy6053 172 VLPISGDAEADELAIKESDRQLLAS--E-VDIMIHGAATIRFD---EALKKAVLLNTRGTKMMLSLAKEMKHLELFVHIS 245 (614)
Q Consensus 172 v~~v~gDl~~~~lGLs~~~~~~l~~--~-vd~ViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vS 245 (614)
+.++.+|+++++ .+..+++ + +|+|||+||..... +.....+++|+.||.+++++|++. ++++|||+|
T Consensus 71 ~~~~~~Dl~d~~------~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~-~~~~iv~~S 143 (397)
T 1gy8_A 71 AALEVGDVRNED------FLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLH-KCDKIIFSS 143 (397)
T ss_dssp CEEEESCTTCHH------HHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEEE
T ss_pred EEEEECCCCCHH------HHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHh-CCCEEEEEC
Confidence 889999999865 7888877 6 99999999987653 345678999999999999999994 889999999
Q ss_pred CceeccCCc---------ccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh-CC
Q psy6053 246 TAYCHLQEK---------VLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN-NG 315 (614)
Q Consensus 246 T~~~~~~~~---------~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~-~g 315 (614)
|.++++... +++|+..+.| .+.|+.||+.+|++++.+.. .|
T Consensus 144 S~~v~g~~~~~~~~~~~~~~~E~~~~~p-----------------------------~~~Y~~sK~~~e~~~~~~~~~~g 194 (397)
T 1gy8_A 144 SAAIFGNPTMGSVSTNAEPIDINAKKSP-----------------------------ESPYGESKLIAERMIRDCAEAYG 194 (397)
T ss_dssp EGGGTBSCCC-----CCCCBCTTSCCBC-----------------------------SSHHHHHHHHHHHHHHHHHHHHC
T ss_pred CHHHhCCCCcccccccccCcCccCCCCC-----------------------------CCchHHHHHHHHHHHHHHHHHHC
Confidence 997765432 3444422211 27899999999999998876 58
Q ss_pred CCEEEeecceeecccCCCCccccCC-CCchHHHHH-----HHhcCce------------eeEee------CCCcccccee
Q psy6053 316 MPCLMLRPSIIIPVWREPLPGWTDN-INGPTGLLI-----GAGKGVI------------RTMFC------DNTGYADFLP 371 (614)
Q Consensus 316 lp~~IvRp~~I~g~~~~p~~gw~d~-~~g~~~~~~-----~~~~g~~------------~~~~~------~~~~~~d~vp 371 (614)
++++++||+.|||+...+..|+.+. .......+. .+..|.. ..+++ ++++.+++||
T Consensus 195 i~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~ 274 (397)
T 1gy8_A 195 IKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVH 274 (397)
T ss_dssp CEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSCC-----------CCCEEEECSCSSSTTSSCEECEEE
T ss_pred CcEEEEeccceeCCCccccccccccchhHHHHHHHHHHHHHHHhcCccccccccccCCCceeecCcccCCCCCeeEeeEe
Confidence 9999999999999976544343221 122333333 4445532 23455 6788999999
Q ss_pred HHHHHHHHHHHHHhhhhcC-CCCc---cEEEeccCCcccccHHHHHHHHhhhcccccCCCCccccCCcccccchhHHHHH
Q psy6053 372 VDITINGIFVAIWAYLSQK-EHRQ---SIVHLTSSQEWQVSWQEIIDIGKSIVTTEVPLNGCVWYPGGSMKSNRLLHQIC 447 (614)
Q Consensus 372 VDdva~aii~~~~~~~~~~-~~~~---~vyni~~~~~~~it~~e~~~~~~~~~g~~~p~~~~~~~p~~~~~~~~~~~~~~ 447 (614)
|+|+|++++.++....... ...+ ++||++++ +++|+.|+++.+.+.+|.+.|... .|.........
T Consensus 275 v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~ni~~~--~~~s~~e~~~~i~~~~g~~~~~~~---~~~~~~~~~~~----- 344 (397)
T 1gy8_A 275 VCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTS--RGYSVREVIEVARKTTGHPIPVRE---CGRREGDPAYL----- 344 (397)
T ss_dssp HHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCS--CCEEHHHHHHHHHHHHCCCCCEEE---ECCCTTCCSEE-----
T ss_pred HHHHHHHHHHHHhcccccccccccCCCcEEEeCCC--CcccHHHHHHHHHHHhCCCCCeee---CCCCCCccccc-----
Confidence 9999999999987654200 0013 79999998 889999999999999887655421 22110000000
Q ss_pred HHHHhhhHHHHHHHHHHHhCCChHHHHHHHHHHHHHhhhhhhhc
Q psy6053 448 VIFFHMIPAYFLDAIIFLSGNKPCLVKIQDRINKGFEVFEYYAN 491 (614)
Q Consensus 448 ~~~~~~~pa~~~d~~~~~~G~~P~~~~l~~ki~~~~~~~~~f~~ 491 (614)
..-.+.+.+.+||+|....+.+.+.+ .++||..
T Consensus 345 --------~~d~~k~~~~lG~~p~~~~l~e~l~~---~~~~~~~ 377 (397)
T 1gy8_A 345 --------VAASDKAREVLGWKPKYDTLEAIMET---SWKFQRT 377 (397)
T ss_dssp --------CBCCHHHHHHTCCCCSCCSHHHHHHH---HHHHHHT
T ss_pred --------ccCHHHHHHHhCCCCCcCCHHHHHHH---HHHHHHh
Confidence 01123456789999986456677776 4556643
No 17
>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}
Probab=100.00 E-value=3.6e-32 Score=284.31 Aligned_cols=305 Identities=19% Similarity=0.189 Sum_probs=217.7
Q ss_pred CCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCC
Q psy6053 101 TGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAE 180 (614)
Q Consensus 101 ~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~ 180 (614)
++|+|||||||||||++|+++|++.|++ .+|+++.|....... ++++++ . ...+++++.+|++
T Consensus 2 ~~m~vlVTGatG~iG~~l~~~L~~~g~~-~~V~~~~r~~~~~~~-~~~~~~--------------~-~~~~~~~~~~Dl~ 64 (336)
T 2hun_A 2 HSMKLLVTGGMGFIGSNFIRYILEKHPD-WEVINIDKLGYGSNP-ANLKDL--------------E-DDPRYTFVKGDVA 64 (336)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHHCTT-CEEEEEECCCTTCCG-GGGTTT--------------T-TCTTEEEEECCTT
T ss_pred CCCeEEEECCCchHHHHHHHHHHHhCCC-CEEEEEecCcccCch-hHHhhh--------------c-cCCceEEEEcCCC
Confidence 3578999999999999999999999743 259999997532111 111100 0 1247899999999
Q ss_pred CCCCCCCHHHHHHHhccccEEEEcccccChh---HHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEeCceeccCC--cc
Q psy6053 181 ADELAIKESDRQLLASEVDIMIHGAATIRFD---EALKKAVLLNTRGTKMMLSLAKEMKHLELFVHISTAYCHLQE--KV 255 (614)
Q Consensus 181 ~~~lGLs~~~~~~l~~~vd~ViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vST~~~~~~~--~~ 255 (614)
+++ .++.++.++|+|||+||..... ......+++|+.||.+++++|.+.+..++|||+||.++++.. .+
T Consensus 65 d~~------~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~ 138 (336)
T 2hun_A 65 DYE------LVKELVRKVDGVVHLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYGDILKGS 138 (336)
T ss_dssp CHH------HHHHHHHTCSEEEECCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGGCCCSSSC
T ss_pred CHH------HHHHHhhCCCEEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHHCCCCCCC
Confidence 865 7888889999999999987643 344678899999999999999996334799999999776643 35
Q ss_pred cccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh-CCCCEEEeecceeecccCCCC
Q psy6053 256 LYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN-NGMPCLMLRPSIIIPVWREPL 334 (614)
Q Consensus 256 i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~-~glp~~IvRp~~I~g~~~~p~ 334 (614)
++|+....| .+.|+.||+.+|++++.+.. .|++++++||+.|||+...+.
T Consensus 139 ~~E~~~~~~-----------------------------~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~~ 189 (336)
T 2hun_A 139 FTENDRLMP-----------------------------SSPYSATKAASDMLVLGWTRTYNLNASITRCTNNYGPYQFPE 189 (336)
T ss_dssp BCTTBCCCC-----------------------------CSHHHHHHHHHHHHHHHHHHHTTCEEEEEEECEEESTTCCTT
T ss_pred cCCCCCCCC-----------------------------CCccHHHHHHHHHHHHHHHHHhCCCEEEEeeeeeeCcCCCcC
Confidence 566533222 27899999999999998876 699999999999999875320
Q ss_pred ccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEeccCCcccccHHHHHH
Q psy6053 335 PGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLTSSQEWQVSWQEIID 414 (614)
Q Consensus 335 ~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~~~~~~~it~~e~~~ 414 (614)
.....++..+..|....++++++...++++++|+|++++.++.... .+++||++++ +++|+.|+++
T Consensus 190 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~-----~g~~~~v~~~--~~~s~~e~~~ 255 (336)
T 2hun_A 190 -------KLIPKTIIRASLGLKIPIYGTGKNVRDWLYVEDHVRAIELVLLKGE-----SREIYNISAG--EEKTNLEVVK 255 (336)
T ss_dssp -------SHHHHHHHHHHTTCCEEEETC---CEEEEEHHHHHHHHHHHHHHCC-----TTCEEEECCS--CEECHHHHHH
T ss_pred -------chHHHHHHHHHcCCCceEeCCCCceeeeEEHHHHHHHHHHHHhCCC-----CCCEEEeCCC--CcccHHHHHH
Confidence 1122355556666655567788889999999999999999886532 5789999998 8899999999
Q ss_pred HHhhhcccccCCCCccccCCcccccchhHHHHHHHHHhhhHHHHHHHHHHHhCCChHHHHHHHHHHHHHhhhhhhh
Q psy6053 415 IGKSIVTTEVPLNGCVWYPGGSMKSNRLLHQICVIFFHMIPAYFLDAIIFLSGNKPCLVKIQDRINKGFEVFEYYA 490 (614)
Q Consensus 415 ~~~~~~g~~~p~~~~~~~p~~~~~~~~~~~~~~~~~~~~~pa~~~d~~~~~~G~~P~~~~l~~ki~~~~~~~~~f~ 490 (614)
.+.+.+|.+.|... +.+........+ ..-.+.+.+.+||+|.. .+.+.+.+ .++||.
T Consensus 256 ~i~~~~g~~~~~~~--~~~~~~~~~~~~-------------~~d~~k~~~~lG~~p~~-~~~~~l~~---~~~~~~ 312 (336)
T 2hun_A 256 IILRLMGKGEELIE--LVEDRPGHDLRY-------------SLDSWKITRDLKWRPKY-TFDEGIKK---TIDWYL 312 (336)
T ss_dssp HHHHHTTCCSTTEE--EECCCTTCCCCC-------------CBCCHHHHHHHCCCCSS-CHHHHHHH---HHHHHH
T ss_pred HHHHHhCCCccccc--ccCCCCCchhhh-------------cCCHHHHHHHhCCCCCC-CHHHHHHH---HHHHHH
Confidence 99999888654221 111110000000 01123456778999976 47777776 455654
No 18
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=100.00 E-value=6.6e-33 Score=287.26 Aligned_cols=245 Identities=15% Similarity=0.157 Sum_probs=192.7
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCCCC
Q psy6053 103 KTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAEAD 182 (614)
Q Consensus 103 ~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~~~ 182 (614)
|+|||||||||||++|+++|++.| . ++++.|....... . ...++.++.+|+++
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g-~---~v~~~~~~~~~~~---------------------~-~~~~~~~~~~Dl~~- 54 (313)
T 3ehe_A 2 SLIVVTGGAGFIGSHVVDKLSESN-E---IVVIDNLSSGNEE---------------------F-VNEAARLVKADLAA- 54 (313)
T ss_dssp -CEEEETTTSHHHHHHHHHHTTTS-C---EEEECCCSSCCGG---------------------G-SCTTEEEECCCTTT-
T ss_pred CEEEEECCCchHHHHHHHHHHhCC-C---EEEEEcCCCCChh---------------------h-cCCCcEEEECcCCh-
Confidence 689999999999999999999998 4 5556554332110 0 33578999999998
Q ss_pred CCCCCHHHHHHHhccccEEEEcccccCh---hHHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEeCceeccCCc--ccc
Q psy6053 183 ELAIKESDRQLLASEVDIMIHGAATIRF---DEALKKAVLLNTRGTKMMLSLAKEMKHLELFVHISTAYCHLQEK--VLY 257 (614)
Q Consensus 183 ~lGLs~~~~~~l~~~vd~ViH~AA~v~~---~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vST~~~~~~~~--~i~ 257 (614)
+ ++..+++++|+|||+||.... .+.+...+++|+.||.+++++|++. ++++|||+||..+++... +++
T Consensus 55 ~------~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~iv~~SS~~vyg~~~~~~~~ 127 (313)
T 3ehe_A 55 D------DIKDYLKGAEEVWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKA-GVSRIVFTSTSTVYGEAKVIPTP 127 (313)
T ss_dssp S------CCHHHHTTCSEEEECCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEECCGGGGCSCSSSSBC
T ss_pred H------HHHHHhcCCCEEEECCCCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEeCchHHhCcCCCCCCC
Confidence 5 577888899999999996432 2456778999999999999999995 789999999998776543 556
Q ss_pred cccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh-CCCCEEEeecceeecccCCCCcc
Q psy6053 258 EKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN-NGMPCLMLRPSIIIPVWREPLPG 336 (614)
Q Consensus 258 E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~-~glp~~IvRp~~I~g~~~~p~~g 336 (614)
|+....| .+.|+.||+.+|++++.+.. .|++++++||+.|||+...+
T Consensus 128 E~~~~~~-----------------------------~~~Y~~sK~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~--- 175 (313)
T 3ehe_A 128 EDYPTHP-----------------------------ISLYGASKLACEALIESYCHTFDMQAWIYRFANVIGRRSTH--- 175 (313)
T ss_dssp TTSCCCC-----------------------------CSHHHHHHHHHHHHHHHHHHHTTCEEEEEECSCEESTTCCC---
T ss_pred CCCCCCC-----------------------------CCHHHHHHHHHHHHHHHHHHhcCCCEEEEeeccccCcCCCc---
Confidence 6533222 27899999999999999876 79999999999999987542
Q ss_pred ccCCCCchHHHHHHHhcC-ceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEeccCCcccccHHHHHHH
Q psy6053 337 WTDNINGPTGLLIGAGKG-VIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLTSSQEWQVSWQEIIDI 415 (614)
Q Consensus 337 w~d~~~g~~~~~~~~~~g-~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~~~~~~~it~~e~~~~ 415 (614)
.....++..+..+ ....++++++..+++++|+|+|++++.++... ..+++||++++ +++|+.|+++.
T Consensus 176 -----~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~-----~~~~~~ni~~~--~~~s~~e~~~~ 243 (313)
T 3ehe_A 176 -----GVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFGLRGD-----ERVNIFNIGSE--DQIKVKRIAEI 243 (313)
T ss_dssp -----SHHHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHHHHHHHTTCC-----SSEEEEECCCS--CCEEHHHHHHH
T ss_pred -----ChHHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHHHHHHHhccC-----CCCceEEECCC--CCeeHHHHHHH
Confidence 1123455555555 34456788999999999999999999988722 26789999999 89999999999
Q ss_pred HhhhcccccC
Q psy6053 416 GKSIVTTEVP 425 (614)
Q Consensus 416 ~~~~~g~~~p 425 (614)
+.+.+|.+.+
T Consensus 244 i~~~~g~~~~ 253 (313)
T 3ehe_A 244 VCEELGLSPR 253 (313)
T ss_dssp HHHHTTCCCE
T ss_pred HHHHhCCCCc
Confidence 9999887643
No 19
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=100.00 E-value=1.4e-32 Score=292.62 Aligned_cols=310 Identities=16% Similarity=0.108 Sum_probs=217.5
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhC-CCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKS-PNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGD 178 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g-~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gD 178 (614)
.++|+|||||||||||++|+++|++.| ++ |++++|...... ++ +. ...+++++.+|
T Consensus 30 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~~---V~~~~r~~~~~~--~~------------l~------~~~~v~~~~~D 86 (377)
T 2q1s_A 30 LANTNVMVVGGAGFVGSNLVKRLLELGVNQ---VHVVDNLLSAEK--IN------------VP------DHPAVRFSETS 86 (377)
T ss_dssp GTTCEEEEETTTSHHHHHHHHHHHHTTCSE---EEEECCCTTCCG--GG------------SC------CCTTEEEECSC
T ss_pred hCCCEEEEECCccHHHHHHHHHHHHcCCce---EEEEECCCCCch--hh------------cc------CCCceEEEECC
Confidence 568999999999999999999999998 65 999999764321 00 00 12578999999
Q ss_pred CCCCCCCCCHHHHHHHhccccEEEEcccccChh---HHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEeCceeccCCc-
Q psy6053 179 AEADELAIKESDRQLLASEVDIMIHGAATIRFD---EALKKAVLLNTRGTKMMLSLAKEMKHLELFVHISTAYCHLQEK- 254 (614)
Q Consensus 179 l~~~~lGLs~~~~~~l~~~vd~ViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vST~~~~~~~~- 254 (614)
+++++ ++.++++++|+|||+||..... .+....+++|+.||.+++++|++.+++++|||+||.++++...
T Consensus 87 l~d~~------~l~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~~vyg~~~~ 160 (377)
T 2q1s_A 87 ITDDA------LLASLQDEYDYVFHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGCSIAEKTF 160 (377)
T ss_dssp TTCHH------HHHHCCSCCSEEEECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC--------
T ss_pred CCCHH------HHHHHhhCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCHHHcCCCCC
Confidence 99865 7888899999999999987653 3456788999999999999999832789999999998776543
Q ss_pred -ccc--cccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh-CCCCEEEeecceeeccc
Q psy6053 255 -VLY--EKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN-NGMPCLMLRPSIIIPVW 330 (614)
Q Consensus 255 -~i~--E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~-~glp~~IvRp~~I~g~~ 330 (614)
+++ |+....|. ....+.|+.||+.+|++++.+.. .|++++++||+.|||+.
T Consensus 161 ~~~~~~E~~~~~~~-------------------------~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~G~~ 215 (377)
T 2q1s_A 161 DDAKATEETDIVSL-------------------------HNNDSPYSMSKIFGEFYSVYYHKQHQLPTVRARFQNVYGPG 215 (377)
T ss_dssp ------CCCCCCCS-------------------------SCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTT
T ss_pred CCcCcccccccccc-------------------------cCCCCchHHHHHHHHHHHHHHHHHhCCCEEEEeeccEECCC
Confidence 344 54311011 01127899999999999998765 59999999999999997
Q ss_pred CCCCcc-ccCCC-----CchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHH-HHHHHHhhhhcCCCCccEEEeccCC
Q psy6053 331 REPLPG-WTDNI-----NGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITING-IFVAIWAYLSQKEHRQSIVHLTSSQ 403 (614)
Q Consensus 331 ~~p~~g-w~d~~-----~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~a-ii~~~~~~~~~~~~~~~vyni~~~~ 403 (614)
..+.+| |.... .....++..+..|....++++++..+++++|+|+|++ ++.++..+. .+ +||++++
T Consensus 216 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~i~~~~~~~~-----~g-~~~i~~~- 288 (377)
T 2q1s_A 216 EILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGVATRDFIFVEDVANGLIACAADGTP-----GG-VYNIASG- 288 (377)
T ss_dssp CCTTCSSCCSSGGGTSCSHHHHHHHHHHTTCCCCCSGGGCCEECCEEHHHHHHHHHHHHHHCCT-----TE-EEECCCC-
T ss_pred CcccccccccCcccccccHHHHHHHHHHcCCCeEEeCCCCeEEeeEEHHHHHHHHHHHHHhcCC-----CC-eEEecCC-
Confidence 632222 22111 1123455566677655566788899999999999999 888887632 45 9999998
Q ss_pred cccccHHHHHHHHhhhcccccCCCCccccCCcccccchhHHHHHHHHHhhhHHHHHHHHHHHhCCChHHHHHHHHHHHHH
Q psy6053 404 EWQVSWQEIIDIGKSIVTTEVPLNGCVWYPGGSMKSNRLLHQICVIFFHMIPAYFLDAIIFLSGNKPCLVKIQDRINKGF 483 (614)
Q Consensus 404 ~~~it~~e~~~~~~~~~g~~~p~~~~~~~p~~~~~~~~~~~~~~~~~~~~~pa~~~d~~~~~~G~~P~~~~l~~ki~~~~ 483 (614)
+++|+.|+++.+.+.+|.+.++.. .|....... . -...-.+.+.+.+||+|.. .+.+.+.+
T Consensus 289 -~~~s~~e~~~~i~~~~g~~~~~~~---~p~~~~~~~---~---------~~~~d~~k~~~~lG~~p~~-~l~e~l~~-- 349 (377)
T 2q1s_A 289 -KETSIADLATKINEITGNNTELDR---LPKRPWDNS---G---------KRFGSPEKARRELGFSADV-SIDDGLRK-- 349 (377)
T ss_dssp -CCEEHHHHHHHHHHHHTCCSCCCC---CCCCGGGCC-------------CCCCCCHHHHHHHCCCCCC-CHHHHHHH--
T ss_pred -CceeHHHHHHHHHHHhCCCCCcee---CCCCccccc---c---------ccccCHHHHHHHcCCCCCC-CHHHHHHH--
Confidence 889999999999999888655432 221100000 0 0001123455678999976 46677766
Q ss_pred hhhhhhh
Q psy6053 484 EVFEYYA 490 (614)
Q Consensus 484 ~~~~~f~ 490 (614)
.++||.
T Consensus 350 -~~~~~~ 355 (377)
T 2q1s_A 350 -TIEWTK 355 (377)
T ss_dssp -HHHHHH
T ss_pred -HHHHHH
Confidence 445554
No 20
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=100.00 E-value=2.3e-32 Score=286.78 Aligned_cols=321 Identities=15% Similarity=0.154 Sum_probs=216.5
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCCCC
Q psy6053 103 KTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAEAD 182 (614)
Q Consensus 103 ~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~~~ 182 (614)
|+|||||||||||++|+++|++.|++ |++++|..... ..+.++++ . ...+++++.+|++++
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g~~---V~~~~r~~~~~-~~~~~~~l---------~------~~~~~~~~~~Dl~d~ 62 (347)
T 1orr_A 2 AKLLITGGCGFLGSNLASFALSQGID---LIVFDNLSRKG-ATDNLHWL---------S------SLGNFEFVHGDIRNK 62 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCE---EEEEECCCSTT-HHHHHHHH---------H------TTCCCEEEECCTTCH
T ss_pred cEEEEeCCCchhHHHHHHHHHhCCCE---EEEEeCCCccC-chhhhhhh---------c------cCCceEEEEcCCCCH
Confidence 68999999999999999999999876 89999864321 11222221 1 124688999999986
Q ss_pred CCCCCHHHHHHHhcc--ccEEEEcccccChh---HHHHHHHHHhHHHHHHHHHHHHHcCCCc-eEEEEeCceeccCCc--
Q psy6053 183 ELAIKESDRQLLASE--VDIMIHGAATIRFD---EALKKAVLLNTRGTKMMLSLAKEMKHLE-LFVHISTAYCHLQEK-- 254 (614)
Q Consensus 183 ~lGLs~~~~~~l~~~--vd~ViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~la~~~~~~k-~~V~vST~~~~~~~~-- 254 (614)
+ +++.++++ +|+|||+||..... +.+...+++|+.||.+++++|++. +++ +|||+||.++++...
T Consensus 63 ~------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~-~~~~~iv~~SS~~v~g~~~~~ 135 (347)
T 1orr_A 63 N------DVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQY-NSNCNIIYSSTNKVYGDLEQY 135 (347)
T ss_dssp H------HHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEEEEEGGGGTTCTTS
T ss_pred H------HHHHHHhccCCCEEEECCcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCceEEEeccHHHhCCCCcC
Confidence 5 78888888 99999999987653 345678899999999999999995 665 999999998776432
Q ss_pred cccccc--CCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh-CCCCEEEeecceeecccC
Q psy6053 255 VLYEKP--YPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN-NGMPCLMLRPSIIIPVWR 331 (614)
Q Consensus 255 ~i~E~~--~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~-~glp~~IvRp~~I~g~~~ 331 (614)
+..|+. +..+..+ ...+++ .| ....+.|+.||+.+|++++.+.. .|++++++||+.|||+..
T Consensus 136 ~~~e~~~~~~~~~~~-------~~~~e~-----~~---~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~ 200 (347)
T 1orr_A 136 KYNETETRYTCVDKP-------NGYDES-----TQ---LDFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQ 200 (347)
T ss_dssp CEEECSSCEEETTCT-------TCBCTT-----SC---CCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTC
T ss_pred Ccccccccccccccc-------cCcccc-----CC---CCCCCchHHHHHHHHHHHHHHHHHhCCcEEEEccCceeCcCC
Confidence 211110 0000000 000000 00 01236899999999999998766 589999999999999875
Q ss_pred CCCccccCCCCchHHHHHHHhcCc-----eeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEeccCCccc
Q psy6053 332 EPLPGWTDNINGPTGLLIGAGKGV-----IRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLTSSQEWQ 406 (614)
Q Consensus 332 ~p~~gw~d~~~g~~~~~~~~~~g~-----~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~~~~~~~ 406 (614)
.+.. +. .....++..+..|. ....++++++.+++++++|+|++++.++..... ..+++||++++..++
T Consensus 201 ~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~~---~~g~~~~v~~~~~~~ 273 (347)
T 1orr_A 201 FATY---DQ-GWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVLHAEDMISLYFTALANVSK---IRGNAFNIGGTIVNS 273 (347)
T ss_dssp CCBT---TB-CHHHHHHHHHHHHHTTCCCCEEEESSSCCEEECEEHHHHHHHHHHHHHTHHH---HTTCEEEESSCGGGE
T ss_pred CCCC---cC-cHHHHHHHHHHhCcccCCCCeEEecCCcceEeeEEHHHHHHHHHHHHhcccc---CCCCEEEeCCCCCCC
Confidence 4311 00 01123444444444 344578899999999999999999999875221 157799999883336
Q ss_pred ccHHHHHHHHhhhcccccCCCCccccCCcccccchhHHHHHHHHHhhhHHHHHHHHHHHhCCChHHHHHHHHHHHHHhhh
Q psy6053 407 VSWQEIIDIGKSIVTTEVPLNGCVWYPGGSMKSNRLLHQICVIFFHMIPAYFLDAIIFLSGNKPCLVKIQDRINKGFEVF 486 (614)
Q Consensus 407 it~~e~~~~~~~~~g~~~p~~~~~~~p~~~~~~~~~~~~~~~~~~~~~pa~~~d~~~~~~G~~P~~~~l~~ki~~~~~~~ 486 (614)
+|+.|+++.+.+.+|.+.+.....+.+... ... ..-.+.+.+.+||+|+. .+.+.+.+ .+
T Consensus 274 ~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~---~~~-------------~~d~~k~~~~lG~~p~~-~~~e~l~~---~~ 333 (347)
T 1orr_A 274 LSLLELFKLLEDYCNIDMRFTNLPVRESDQ---RVF-------------VADIKKITNAIDWSPKV-SAKDGVQK---MY 333 (347)
T ss_dssp EEHHHHHHHHHHHHTCCCCEEEECCCSSCC---SEE-------------CBCCHHHHHHHCCCCCS-CHHHHHHH---HH
T ss_pred ccHHHHHHHHHHHhCCCCCceeCCCCCCCc---cee-------------ecCHHHHHHHHCCCccC-CHHHHHHH---HH
Confidence 999999999999988765433211111110 000 01123445788999976 56677766 45
Q ss_pred hhhhc
Q psy6053 487 EYYAN 491 (614)
Q Consensus 487 ~~f~~ 491 (614)
+||..
T Consensus 334 ~~~~~ 338 (347)
T 1orr_A 334 DWTSS 338 (347)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55543
No 21
>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*
Probab=100.00 E-value=6.2e-32 Score=282.73 Aligned_cols=303 Identities=17% Similarity=0.173 Sum_probs=218.5
Q ss_pred cEEEEecccccccHHHHHHHHhh-CCCc--cEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 103 KTLFMTGASGFLGKVLLEKILRK-SPNV--KKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 103 ~~VLITGaTGFlG~~Ll~~Ll~~-g~~v--~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
|+|||||||||||++|+++|+++ ++++ .+|++++|....... ++++++ . ...+++++.+|+
T Consensus 1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~-~~~~~~-------------~--~~~~~~~~~~Dl 64 (337)
T 1r6d_A 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNR-ANLAPV-------------D--ADPRLRFVHGDI 64 (337)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCG-GGGGGG-------------T--TCTTEEEEECCT
T ss_pred CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCch-hhhhhc-------------c--cCCCeEEEEcCC
Confidence 57999999999999999999996 3221 359999997532111 111100 0 125789999999
Q ss_pred CCCCCCCCHHHHHHHhccccEEEEcccccChh---HHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEeCceeccCC--c
Q psy6053 180 EADELAIKESDRQLLASEVDIMIHGAATIRFD---EALKKAVLLNTRGTKMMLSLAKEMKHLELFVHISTAYCHLQE--K 254 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~~vd~ViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vST~~~~~~~--~ 254 (614)
++++ .+.+++.++|+|||+||..... .+.+..+++|+.||.+++++|.+. ++++|||+||.++++.. .
T Consensus 65 ~d~~------~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~-~~~~~v~~SS~~vyg~~~~~ 137 (337)
T 1r6d_A 65 RDAG------LLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDA-GVGRVVHVSTNQVYGSIDSG 137 (337)
T ss_dssp TCHH------HHHHHTTTCCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHT-TCCEEEEEEEGGGGCCCSSS
T ss_pred CCHH------HHHHHhcCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEecchHHhCCCCCC
Confidence 9865 7888889999999999987643 344578899999999999999995 78999999999777643 3
Q ss_pred ccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh-CCCCEEEeecceeecccCCC
Q psy6053 255 VLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN-NGMPCLMLRPSIIIPVWREP 333 (614)
Q Consensus 255 ~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~-~glp~~IvRp~~I~g~~~~p 333 (614)
+++|+....| .+.|+.||+.+|++++.+.. .|++++++||+.|||+...+
T Consensus 138 ~~~E~~~~~~-----------------------------~~~Y~~sK~~~e~~~~~~~~~~g~~~~ilrp~~v~G~~~~~ 188 (337)
T 1r6d_A 138 SWTESSPLEP-----------------------------NSPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHP 188 (337)
T ss_dssp CBCTTSCCCC-----------------------------CSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCT
T ss_pred CCCCCCCCCC-----------------------------CCchHHHHHHHHHHHHHHHHHHCCCEEEEEeeeeECCCCCC
Confidence 5555532222 27899999999999988765 58999999999999987532
Q ss_pred CccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEeccCCcccccHHHHH
Q psy6053 334 LPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLTSSQEWQVSWQEII 413 (614)
Q Consensus 334 ~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~~~~~~~it~~e~~ 413 (614)
. .....++..+..|....++++++...++++++|+|++++.++.+.. .+++||++++ +++|+.|++
T Consensus 189 ~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~-----~g~~~~v~~~--~~~s~~e~~ 254 (337)
T 1r6d_A 189 E-------KLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGGR-----AGEIYHIGGG--LELTNRELT 254 (337)
T ss_dssp T-------SHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHCC-----TTCEEEECCC--CEEEHHHHH
T ss_pred C-------ChHHHHHHHHhcCCCcEEeCCCCeeEeeEeHHHHHHHHHHHHhCCC-----CCCEEEeCCC--CCccHHHHH
Confidence 0 1122355556666655567888899999999999999999886532 5789999998 889999999
Q ss_pred HHHhhhcccccCCCCccccCCcccccchhHHHHHHHHHhhhHHHHHHHHHHHhCCChHHHHHHHHHHHHHhhhhhhh
Q psy6053 414 DIGKSIVTTEVPLNGCVWYPGGSMKSNRLLHQICVIFFHMIPAYFLDAIIFLSGNKPCLVKIQDRINKGFEVFEYYA 490 (614)
Q Consensus 414 ~~~~~~~g~~~p~~~~~~~p~~~~~~~~~~~~~~~~~~~~~pa~~~d~~~~~~G~~P~~~~l~~ki~~~~~~~~~f~ 490 (614)
+.+.+.+|.+.|.. .+.+........+ ..-.+.+.+.+||+|.. .+.+.+.+ .++||.
T Consensus 255 ~~i~~~~g~~~~~~--~~~~~~~~~~~~~-------------~~d~~k~~~~lG~~p~~-~~~e~l~~---~~~~~~ 312 (337)
T 1r6d_A 255 GILLDSLGADWSSV--RKVADRKGHDLRY-------------SLDGGKIERELGYRPQV-SFADGLAR---TVRWYR 312 (337)
T ss_dssp HHHHHHHTCCGGGE--EEECCCTTCCCBC-------------CBCCHHHHHHHCCCCCS-CHHHHHHH---HHHHHH
T ss_pred HHHHHHhCCCcccc--eecCCCCCCccee-------------ecCHHHHHHHcCCCCCC-CHHHHHHH---HHHHHH
Confidence 99999988865421 1111110000000 01123445678999976 36777776 445554
No 22
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=100.00 E-value=3.2e-32 Score=286.09 Aligned_cols=302 Identities=16% Similarity=0.165 Sum_probs=217.4
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCCC
Q psy6053 102 GKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAEA 181 (614)
Q Consensus 102 ~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~~ 181 (614)
.|+|||||||||||++|+++|++.|++ .+|++++|....... +++.+ . ...+++++.+|+++
T Consensus 4 m~~vlVTGatG~iG~~l~~~L~~~~~g-~~V~~~~r~~~~~~~-~~~~~-------------~---~~~~~~~~~~Dl~d 65 (348)
T 1oc2_A 4 FKNIIVTGGAGFIGSNFVHYVYNNHPD-VHVTVLDKLTYAGNK-ANLEA-------------I---LGDRVELVVGDIAD 65 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHCTT-CEEEEEECCCTTCCG-GGTGG-------------G---CSSSEEEEECCTTC
T ss_pred CcEEEEeCCccHHHHHHHHHHHHhCCC-CEEEEEeCCCCCCCh-hHHhh-------------h---ccCCeEEEECCCCC
Confidence 378999999999999999999999332 249999997532111 11100 0 12578999999998
Q ss_pred CCCCCCHHHHHHHhccccEEEEcccccChh---HHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEeCceeccCC-----
Q psy6053 182 DELAIKESDRQLLASEVDIMIHGAATIRFD---EALKKAVLLNTRGTKMMLSLAKEMKHLELFVHISTAYCHLQE----- 253 (614)
Q Consensus 182 ~~lGLs~~~~~~l~~~vd~ViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vST~~~~~~~----- 253 (614)
++ .+..+++++|+|||+||..... ......+++|+.||.+++++|.+. ++ +|||+||.++++..
T Consensus 66 ~~------~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-~~-~~v~~SS~~vyg~~~~~~~ 137 (348)
T 1oc2_A 66 AE------LVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKY-DI-RFHHVSTDEVYGDLPLRED 137 (348)
T ss_dssp HH------HHHHHHTTCSEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHH-TC-EEEEEEEGGGGCCBCCGGG
T ss_pred HH------HHHHHhhcCCEEEECCcccCccchhhCHHHHHHHHHHHHHHHHHHHHHh-CC-eEEEecccceeCCCccccc
Confidence 65 8899999999999999987643 334568899999999999999996 66 99999999776543
Q ss_pred ---------cccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh-CCCCEEEeec
Q psy6053 254 ---------KVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN-NGMPCLMLRP 323 (614)
Q Consensus 254 ---------~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~-~glp~~IvRp 323 (614)
.+++|+.... ..+.|+.||+.+|++++.+.. .|++++++||
T Consensus 138 ~~~~~~~~~~~~~E~~~~~-----------------------------~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilrp 188 (348)
T 1oc2_A 138 LPGHGEGPGEKFTAETNYN-----------------------------PSSPYSSTKAASDLIVKAWVRSFGVKATISNC 188 (348)
T ss_dssp STTTTCSTTSSBCTTSCCC-----------------------------CCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEE
T ss_pred ccccccccCCCcCCCCCCC-----------------------------CCCccHHHHHHHHHHHHHHHHHhCCCEEEEee
Confidence 2333432111 127899999999999998765 5899999999
Q ss_pred ceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEeccCC
Q psy6053 324 SIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLTSSQ 403 (614)
Q Consensus 324 ~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~~~~ 403 (614)
+.|||+...+. .....++..+..|....++++++...++++++|+|++++.++.... .+++||++++
T Consensus 189 ~~v~G~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~-----~g~~~~i~~~- 255 (348)
T 1oc2_A 189 SNNYGPYQHIE-------KFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAILTKGR-----MGETYLIGAD- 255 (348)
T ss_dssp CCEESTTCCTT-------SHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHHHHHHHHCC-----TTCEEEECCS-
T ss_pred ceeeCCCCCcc-------chHHHHHHHHHcCCCceEecCCCceEeeEEHHHHHHHHHHHhhCCC-----CCCeEEeCCC-
Confidence 99999875320 1122345556666655667888899999999999999999886532 5789999998
Q ss_pred cccccHHHHHHHHhhhcccccCCCCccccCCcccccchhHHHHHHHHHhhhHHHHHHHHHHHhCCChHHHHHHHHHHHHH
Q psy6053 404 EWQVSWQEIIDIGKSIVTTEVPLNGCVWYPGGSMKSNRLLHQICVIFFHMIPAYFLDAIIFLSGNKPCLVKIQDRINKGF 483 (614)
Q Consensus 404 ~~~it~~e~~~~~~~~~g~~~p~~~~~~~p~~~~~~~~~~~~~~~~~~~~~pa~~~d~~~~~~G~~P~~~~l~~ki~~~~ 483 (614)
.++++.|+++.+.+.+|.+.|.. .+.+........+ ..-.+.+.+.+||+|....+.+.+.+
T Consensus 256 -~~~s~~e~~~~i~~~~g~~~~~~--~~~~~~~~~~~~~-------------~~d~~k~~~~lG~~p~~~~~~~~l~~-- 317 (348)
T 1oc2_A 256 -GEKNNKEVLELILEKMGQPKDAY--DHVTDRAGHDLRY-------------AIDASKLRDELGWTPQFTDFSEGLEE-- 317 (348)
T ss_dssp -CEEEHHHHHHHHHHHTTCCTTCS--EEECCCTTCCCBC-------------CBCCHHHHHHHCCCCSCCCHHHHHHH--
T ss_pred -CCCCHHHHHHHHHHHhCCCcccc--ccCCCCCCccccc-------------ccCHHHHHHHcCCCCCCCcHHHHHHH--
Confidence 88999999999999988765422 1222110000000 01123455678999986336677776
Q ss_pred hhhhhhh
Q psy6053 484 EVFEYYA 490 (614)
Q Consensus 484 ~~~~~f~ 490 (614)
.++||.
T Consensus 318 -~~~~~~ 323 (348)
T 1oc2_A 318 -TIQWYT 323 (348)
T ss_dssp -HHHHHH
T ss_pred -HHHHHH
Confidence 445554
No 23
>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}
Probab=100.00 E-value=8e-32 Score=291.67 Aligned_cols=267 Identities=21% Similarity=0.198 Sum_probs=194.1
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
..+|+|||||||||||++|+++|++.|.+ |++++|+.....+.+++.+.+....-+.+.. . ...++.++.||+
T Consensus 67 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~---V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~---~-~~~~v~~v~~Dl 139 (427)
T 4f6c_A 67 RPLGNTLLTGATGFLGAYLIEALQGYSHR---IYCFIRADNEEIAWYKLMTNLNDYFSEETVE---M-MLSNIEVIVGDF 139 (427)
T ss_dssp CCCEEEEEECTTSHHHHHHHHHHTTTEEE---EEEEEECSSHHHHHHHHHHHHHHHSCHHHHH---H-HHTTEEEEEECC
T ss_pred CCCCEEEEecCCcHHHHHHHHHHHcCCCE---EEEEECCCChHHHHHHHHHHHHHhccccccc---c-ccCceEEEeCCC
Confidence 45789999999999999999999888754 9999999876556677766554321110111 1 236899999999
Q ss_pred CCCC-CCCCHHHHHHHhccccEEEEcccccChhHHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEeCceeccCC-----
Q psy6053 180 EADE-LAIKESDRQLLASEVDIMIHGAATIRFDEALKKAVLLNTRGTKMMLSLAKEMKHLELFVHISTAYCHLQE----- 253 (614)
Q Consensus 180 ~~~~-lGLs~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vST~~~~~~~----- 253 (614)
++++ ++ ...++|+|||+||.++...++...+++|+.||.+++++|.+ +.++|||+||.++ +..
T Consensus 140 ~d~~~l~--------~~~~~d~Vih~A~~~~~~~~~~~~~~~Nv~g~~~l~~aa~~--~~~~~v~~SS~~~-G~~~~~~~ 208 (427)
T 4f6c_A 140 ECMDDVV--------LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ--HHARLIYVSTISV-GTYFDIDT 208 (427)
T ss_dssp ---CCCC--------CSSCCSEEEECCCCC-------CHHHHHHHHHHHHHHHHHH--TTCEEEEEEEGGG-GSEECSSC
T ss_pred CCcccCC--------CcCCCCEEEECCcccCCCCCHHHHHHHHHHHHHHHHHHHHh--cCCcEEEECchHh-CCCccCCC
Confidence 9944 42 66799999999999988788888999999999999999998 6789999999988 431
Q ss_pred --cccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhhCCCCEEEeecceeecccC
Q psy6053 254 --KVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMNNGMPCLMLRPSIIIPVWR 331 (614)
Q Consensus 254 --~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~~glp~~IvRp~~I~g~~~ 331 (614)
.+++|+....+. ...+.|+.||+.+|++++++.+.|++++|+|||.|+|+..
T Consensus 209 ~~~~~~E~~~~~~~--------------------------~~~~~Y~~sK~~~E~~~~~~~~~g~~~~ivRpg~v~G~~~ 262 (427)
T 4f6c_A 209 EDVTFSEADVYKGQ--------------------------LLTSPYTRSKFYSELKVLEAVNNGLDGRIVRVGNLTSPYN 262 (427)
T ss_dssp SCCEECTTCSCSSC--------------------------CCCSHHHHHHHHHHHHHHHHHHTTCCEEEEEECCEESCSS
T ss_pred CCccccccccccCC--------------------------CCCCchHHHHHHHHHHHHHHHHcCCCEEEEeCCeeecCCC
Confidence 244454321111 1248999999999999999876799999999999999976
Q ss_pred CCCccccCCC--CchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEeccCCcccccH
Q psy6053 332 EPLPGWTDNI--NGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLTSSQEWQVSW 409 (614)
Q Consensus 332 ~p~~gw~d~~--~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~~~~~~~it~ 409 (614)
.+. |..+. .....++.....+.... .++++..++++||||+|++++.++.... .+++||++++ ++++|
T Consensus 263 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~v~DvA~ai~~~~~~~~-----~g~~~~l~~~--~~~s~ 332 (427)
T 4f6c_A 263 GRW--HMRNIKTNRFSMVMNDLLQLDCIG-VSMAEMPVDFSFVDTTARQIVALAQVNT-----PQIIYHVLSP--NKMPV 332 (427)
T ss_dssp SCC--CCTTGGGCHHHHHHHHHHHSSEEE-HHHHTCEECCEEHHHHHHHHHHHTTSCC-----CCSEEEESCS--CCEEH
T ss_pred CCc--cccCcchHHHHHHHHHHHhcCCCC-CccccceEEEeeHHHHHHHHHHHHcCCC-----CCCEEEecCC--CCCcH
Confidence 531 11121 11234455554443322 1346889999999999999999886543 6789999999 89999
Q ss_pred HHHHHHHhhhcc
Q psy6053 410 QEIIDIGKSIVT 421 (614)
Q Consensus 410 ~e~~~~~~~~~g 421 (614)
.|+++.+.+. |
T Consensus 333 ~el~~~i~~~-g 343 (427)
T 4f6c_A 333 KSLLECVKRK-E 343 (427)
T ss_dssp HHHHHHHHSS-C
T ss_pred HHHHHHHHHc-C
Confidence 9999999985 7
No 24
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=100.00 E-value=4.4e-32 Score=289.07 Aligned_cols=299 Identities=17% Similarity=0.129 Sum_probs=220.0
Q ss_pred CCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCC
Q psy6053 101 TGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAE 180 (614)
Q Consensus 101 ~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~ 180 (614)
++|+|||||||||||++|+++|++.|++ |++++|........ ...+++++.+|++
T Consensus 28 ~~~~vlVtGatG~iG~~l~~~L~~~g~~---V~~~~r~~~~~~~~----------------------~~~~v~~~~~Dl~ 82 (379)
T 2c5a_A 28 ENLKISITGAGGFIASHIARRLKHEGHY---VIASDWKKNEHMTE----------------------DMFCDEFHLVDLR 82 (379)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESSCCSSSCG----------------------GGTCSEEEECCTT
T ss_pred cCCeEEEECCccHHHHHHHHHHHHCCCe---EEEEECCCccchhh----------------------ccCCceEEECCCC
Confidence 4689999999999999999999999865 89999986542100 1246889999999
Q ss_pred CCCCCCCHHHHHHHhccccEEEEcccccCh----hHHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEeCceeccCCc--
Q psy6053 181 ADELAIKESDRQLLASEVDIMIHGAATIRF----DEALKKAVLLNTRGTKMMLSLAKEMKHLELFVHISTAYCHLQEK-- 254 (614)
Q Consensus 181 ~~~lGLs~~~~~~l~~~vd~ViH~AA~v~~----~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vST~~~~~~~~-- 254 (614)
+++ ++..+++++|+|||+||.... ..+....+++|+.||.+++++|++. ++++|||+||.++++...
T Consensus 83 d~~------~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~-~~~~~V~~SS~~v~~~~~~~ 155 (379)
T 2c5a_A 83 VME------NCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARIN-GIKRFFYASSACIYPEFKQL 155 (379)
T ss_dssp SHH------HHHHHHTTCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHT-TCSEEEEEEEGGGSCGGGSS
T ss_pred CHH------HHHHHhCCCCEEEECceecCcccccccCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEeehheeCCCCCC
Confidence 865 788999999999999997653 3456778999999999999999994 889999999998776432
Q ss_pred -----ccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh-CCCCEEEeecceeec
Q psy6053 255 -----VLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN-NGMPCLMLRPSIIIP 328 (614)
Q Consensus 255 -----~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~-~glp~~IvRp~~I~g 328 (614)
+++|+... | ....+.|+.||+.+|++++.+.. .|++++++||+.|||
T Consensus 156 ~~~~~~~~E~~~~-~--------------------------~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~G 208 (379)
T 2c5a_A 156 ETTNVSLKESDAW-P--------------------------AEPQDAFGLEKLATEELCKHYNKDFGIECRIGRFHNIYG 208 (379)
T ss_dssp SSSSCEECGGGGS-S--------------------------BCCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEEC
T ss_pred CccCCCcCcccCC-C--------------------------CCCCChhHHHHHHHHHHHHHHHHHHCCCEEEEEeCceeC
Confidence 23443200 0 01137899999999999988765 589999999999999
Q ss_pred ccCCCCccccCCCCchHHHHHHHhcCce-eeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEeccCCcccc
Q psy6053 329 VWREPLPGWTDNINGPTGLLIGAGKGVI-RTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLTSSQEWQV 407 (614)
Q Consensus 329 ~~~~p~~gw~d~~~g~~~~~~~~~~g~~-~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~~~~~~~i 407 (614)
+...+..++. .....++..+..|.. ..++++++..+++++++|+|++++.++... .+++||++++ +++
T Consensus 209 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~------~~~~~ni~~~--~~~ 277 (379)
T 2c5a_A 209 PFGTWKGGRE---KAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSD------FREPVNIGSD--EMV 277 (379)
T ss_dssp TTSCCSSSCC---CHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHHHHHHSS------CCSCEEECCC--CCE
T ss_pred cCCCcccccc---cHHHHHHHHHHhCCCceEEeCCCCeeEEEEEHHHHHHHHHHHhhcc------CCCeEEeCCC--Ccc
Confidence 9765432211 123345555656653 445688889999999999999999988653 4579999998 889
Q ss_pred cHHHHHHHHhhhcccccCCCCccccCCcccccchhHHHHHHHHHhhhHHHHHHHHHHHhCCChHHHHHHHHHHHHHhhhh
Q psy6053 408 SWQEIIDIGKSIVTTEVPLNGCVWYPGGSMKSNRLLHQICVIFFHMIPAYFLDAIIFLSGNKPCLVKIQDRINKGFEVFE 487 (614)
Q Consensus 408 t~~e~~~~~~~~~g~~~p~~~~~~~p~~~~~~~~~~~~~~~~~~~~~pa~~~d~~~~~~G~~P~~~~l~~ki~~~~~~~~ 487 (614)
|+.|+++.+.+.+|.+.+.. +.|........ ..-.+.+.+.+||+|.. .+.+.+.+ .++
T Consensus 278 s~~e~~~~i~~~~g~~~~~~---~~p~~~~~~~~--------------~~d~~k~~~~lG~~p~~-~l~e~l~~---~~~ 336 (379)
T 2c5a_A 278 SMNEMAEMVLSFEEKKLPIH---HIPGPEGVRGR--------------NSDNNLIKEKLGWAPNM-RLKEGLRI---TYF 336 (379)
T ss_dssp EHHHHHHHHHHTTTCCCCEE---EECCCCCCSBC--------------EECCHHHHHHHSCCCCC-CHHHHHHH---HHH
T ss_pred CHHHHHHHHHHHhCCCCcee---eCCCCCCcccc--------------cCCHHHHHHHhCCCCCC-CHHHHHHH---HHH
Confidence 99999999999988765432 12211000000 01123456778999986 46777776 445
Q ss_pred hhh
Q psy6053 488 YYA 490 (614)
Q Consensus 488 ~f~ 490 (614)
||.
T Consensus 337 ~~~ 339 (379)
T 2c5a_A 337 WIK 339 (379)
T ss_dssp HHH
T ss_pred HHH
Confidence 554
No 25
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=100.00 E-value=7.4e-32 Score=284.56 Aligned_cols=310 Identities=13% Similarity=0.071 Sum_probs=217.5
Q ss_pred ccCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCC
Q psy6053 99 TFTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGD 178 (614)
Q Consensus 99 ~~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gD 178 (614)
.+++|+|||||||||||++|+++|++.|++ |++++|....... +.+. +. ...++.++.+|
T Consensus 6 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~---V~~~~r~~~~~~~---~~~~--------~~------~~~~~~~~~~D 65 (357)
T 1rkx_A 6 FWQGKRVFVTGHTGFKGGWLSLWLQTMGAT---VKGYSLTAPTVPS---LFET--------AR------VADGMQSEIGD 65 (357)
T ss_dssp HHTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESSCSSSSC---HHHH--------TT------TTTTSEEEECC
T ss_pred hhCCCEEEEECCCchHHHHHHHHHHhCCCe---EEEEeCCCcccch---hhHh--------hc------cCCceEEEEcc
Confidence 456899999999999999999999999875 9999997644221 1110 00 12478899999
Q ss_pred CCCCCCCCCHHHHHHHhcc--ccEEEEcccccChh---HHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEeCceeccCC
Q psy6053 179 AEADELAIKESDRQLLASE--VDIMIHGAATIRFD---EALKKAVLLNTRGTKMMLSLAKEMKHLELFVHISTAYCHLQE 253 (614)
Q Consensus 179 l~~~~lGLs~~~~~~l~~~--vd~ViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vST~~~~~~~ 253 (614)
+++++ .+..++++ +|+|||+||..... ......+++|+.||.+++++|++++++++|||+||.++++..
T Consensus 66 l~d~~------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~vyg~~ 139 (357)
T 1rkx_A 66 IRDQN------KLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNK 139 (357)
T ss_dssp TTCHH------HHHHHHHHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCC
T ss_pred ccCHH------HHHHHHHhcCCCEEEECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHHhCCC
Confidence 99865 78888876 89999999965432 345678899999999999999996448999999999887654
Q ss_pred c---ccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh-C---------CCCEEE
Q psy6053 254 K---VLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN-N---------GMPCLM 320 (614)
Q Consensus 254 ~---~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~-~---------glp~~I 320 (614)
. ++.|+....| .+.|+.||+.+|++++.+.. . |+++++
T Consensus 140 ~~~~~~~E~~~~~~-----------------------------~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~ 190 (357)
T 1rkx_A 140 EWIWGYRENEAMGG-----------------------------YDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVAT 190 (357)
T ss_dssp CSSSCBCTTSCBCC-----------------------------SSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEE
T ss_pred CcCCCCCCCCCCCC-----------------------------CCccHHHHHHHHHHHHHHHHHHhhhhccccCCceEEE
Confidence 3 3444422111 27899999999999988754 1 899999
Q ss_pred eecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEec
Q psy6053 321 LRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLT 400 (614)
Q Consensus 321 vRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~ 400 (614)
+||+.|||+...+. ......++..+..|....+ ++++..++++||+|+|++++.++..........+++||++
T Consensus 191 lrp~~v~G~~~~~~------~~~~~~~~~~~~~g~~~~~-~~~~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~~~~~ni~ 263 (357)
T 1rkx_A 191 VRAGNVIGGGDWAL------DRIVPDILRAFEQSQPVII-RNPHAIRPWQHVLEPLSGYLLLAQKLYTDGAEYAEGWNFG 263 (357)
T ss_dssp EECCCEECTTCCCS------SCHHHHHHHHHHTTCCEEC-SCTTCEECCEETHHHHHHHHHHHHHHHHTCGGGCSEEECC
T ss_pred EeeceeeCCCCCcc------ccHHHHHHHHHhcCCCEEE-CCCCCeeccEeHHHHHHHHHHHHHhhhhcCCCCCceEEEC
Confidence 99999999864221 0112345555566665433 4577889999999999999998875210000256899999
Q ss_pred cCCcccccHHHHHHHHhhhcccccCCCCccc-cCCcccccchhHHHHHHHHHhhhHHHHHHHHHHHhCCChHHHHHHHHH
Q psy6053 401 SSQEWQVSWQEIIDIGKSIVTTEVPLNGCVW-YPGGSMKSNRLLHQICVIFFHMIPAYFLDAIIFLSGNKPCLVKIQDRI 479 (614)
Q Consensus 401 ~~~~~~it~~e~~~~~~~~~g~~~p~~~~~~-~p~~~~~~~~~~~~~~~~~~~~~pa~~~d~~~~~~G~~P~~~~l~~ki 479 (614)
+++.+++|+.|+++.+.+.+|.+.++..... .|.. .. -...-.+.+.+.+||+|.. .+.+.+
T Consensus 264 ~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~---~~-------------~~~~d~~k~~~~lG~~p~~-~l~e~l 326 (357)
T 1rkx_A 264 PNDADATPVKNIVEQMVKYWGEGASWQLDGNAHPHE---AH-------------YLKLDCSKAKMQLGWHPRW-NLNTTL 326 (357)
T ss_dssp CCGGGCEEHHHHHHHHHHHHCTTCCEEC-------C---CC-------------CCCBCCHHHHHHHCCCCCC-CHHHHH
T ss_pred CCCCCcccHHHHHHHHHHHhCCCCccccCCCCCCcC---cc-------------cccCCHHHHHHHhCCCcCC-cHHHHH
Confidence 7533689999999999999887644321100 0000 00 0001123456778999976 677777
Q ss_pred HHHHhhhhhhh
Q psy6053 480 NKGFEVFEYYA 490 (614)
Q Consensus 480 ~~~~~~~~~f~ 490 (614)
.+ .++||.
T Consensus 327 ~~---~~~~~~ 334 (357)
T 1rkx_A 327 EY---IVGWHK 334 (357)
T ss_dssp HH---HHHHHH
T ss_pred HH---HHHHHH
Confidence 76 444553
No 26
>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A
Probab=100.00 E-value=1.1e-31 Score=281.19 Aligned_cols=265 Identities=13% Similarity=0.100 Sum_probs=198.6
Q ss_pred cEEEEecccccccHHHHHHHHhh-CCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCCC
Q psy6053 103 KTLFMTGASGFLGKVLLEKILRK-SPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAEA 181 (614)
Q Consensus 103 ~~VLITGaTGFlG~~Ll~~Ll~~-g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~~ 181 (614)
|+|||||||||||++++++|++. |++ |++++|...... + +. ...+++++.+|+++
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~g~~---V~~~~r~~~~~~------~---------~~------~~~~~~~~~~D~~~ 56 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLREDHYE---VYGLDIGSDAIS------R---------FL------NHPHFHFVEGDISI 56 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTCE---EEEEESCCGGGG------G---------GT------TCTTEEEEECCTTT
T ss_pred CeEEEECCCcHHHHHHHHHHHHhCCCE---EEEEeCCcchHH------H---------hh------cCCCeEEEeccccC
Confidence 58999999999999999999998 665 999999753211 0 00 22478999999998
Q ss_pred CCCCCCHHHHHHHhccccEEEEcccccCh---hHHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEeCceeccCCc--cc
Q psy6053 182 DELAIKESDRQLLASEVDIMIHGAATIRF---DEALKKAVLLNTRGTKMMLSLAKEMKHLELFVHISTAYCHLQEK--VL 256 (614)
Q Consensus 182 ~~lGLs~~~~~~l~~~vd~ViH~AA~v~~---~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vST~~~~~~~~--~i 256 (614)
+. +.++.+++++|+|||+||.... .......+++|+.|+.+++++|++. + ++|||+||.++++... ++
T Consensus 57 ~~-----~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~-~~~v~~SS~~v~g~~~~~~~ 129 (345)
T 2bll_A 57 HS-----EWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKY-R-KRIIFPSTSEVYGMCSDKYF 129 (345)
T ss_dssp CS-----HHHHHHHHHCSEEEECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHT-T-CEEEEECCGGGGBTCCCSSB
T ss_pred cH-----HHHHhhccCCCEEEEcccccCccchhcCHHHHHHHHHHHHHHHHHHHHHh-C-CeEEEEecHHHcCCCCCCCc
Confidence 53 2577788899999999997653 2345678899999999999999995 6 8999999998776543 45
Q ss_pred ccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh-CCCCEEEeecceeecccCCCCc
Q psy6053 257 YEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN-NGMPCLMLRPSIIIPVWREPLP 335 (614)
Q Consensus 257 ~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~-~glp~~IvRp~~I~g~~~~p~~ 335 (614)
+|+..+.+..+. ....+.|+.||+.+|++++.+.. .|++++++||+.|||+...+..
T Consensus 130 ~e~~~~~~~~~~----------------------~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~ 187 (345)
T 2bll_A 130 DEDHSNLIVGPV----------------------NKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLN 187 (345)
T ss_dssp CTTTCCCBCCCT----------------------TCGGGHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTT
T ss_pred CCcccccccCcc----------------------cCcccccHHHHHHHHHHHHHHHHhcCCCEEEEcCCcccCCCccccc
Confidence 565332111100 01125899999999999988765 5999999999999999865422
Q ss_pred cccCCCCc-hHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEeccCCcc-cccHHHHH
Q psy6053 336 GWTDNING-PTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLTSSQEW-QVSWQEII 413 (614)
Q Consensus 336 gw~d~~~g-~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~~~~~~-~it~~e~~ 413 (614)
.+..+..+ ...++..+..|....++++++..+++++|+|+|++++.++.+... ...+++||++++ + ++|+.|++
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~--~~~g~~~~i~~~--~~~~s~~e~~ 263 (345)
T 2bll_A 188 AARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGN--RCDGEIINIGNP--ENEASIEELG 263 (345)
T ss_dssp CSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHHHHHHHCGGG--TTTTEEEEECCT--TSEEEHHHHH
T ss_pred ccccccccHHHHHHHHHHcCCCcEEECCCCEEEEEEEHHHHHHHHHHHHhhccc--cCCCceEEeCCC--CCCCCHHHHH
Confidence 11111111 234555666776666678888999999999999999999876531 015789999987 5 79999999
Q ss_pred HHHhhhccccc
Q psy6053 414 DIGKSIVTTEV 424 (614)
Q Consensus 414 ~~~~~~~g~~~ 424 (614)
+.+.+.+|.+.
T Consensus 264 ~~i~~~~g~~~ 274 (345)
T 2bll_A 264 EMLLASFEKHP 274 (345)
T ss_dssp HHHHHHHHTCT
T ss_pred HHHHHHhCCCc
Confidence 99999988754
No 27
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=99.98 E-value=1.6e-31 Score=280.01 Aligned_cols=248 Identities=14% Similarity=0.134 Sum_probs=186.6
Q ss_pred CCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCC
Q psy6053 101 TGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAE 180 (614)
Q Consensus 101 ~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~ 180 (614)
.+|+|||||||||||++|+++|+++|++ |++++|+..... + + ...+++++.+|++
T Consensus 12 ~~M~ilVtGatG~iG~~l~~~L~~~g~~---V~~~~r~~~~~~---~------------l-------~~~~~~~~~~Dl~ 66 (342)
T 2x4g_A 12 AHVKYAVLGATGLLGHHAARAIRAAGHD---LVLIHRPSSQIQ---R------------L-------AYLEPECRVAEML 66 (342)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTTCE---EEEEECTTSCGG---G------------G-------GGGCCEEEECCTT
T ss_pred cCCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEecChHhhh---h------------h-------ccCCeEEEEecCC
Confidence 3468999999999999999999999875 899999764321 0 0 1136889999999
Q ss_pred CCCCCCCHHHHHHHhccccEEEEcccccCh-hHHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEeCceeccCCc---cc
Q psy6053 181 ADELAIKESDRQLLASEVDIMIHGAATIRF-DEALKKAVLLNTRGTKMMLSLAKEMKHLELFVHISTAYCHLQEK---VL 256 (614)
Q Consensus 181 ~~~lGLs~~~~~~l~~~vd~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vST~~~~~~~~---~i 256 (614)
+++ .+..+++++|+|||+||.... ..+....+++|+.||.+++++|++. ++++|||+||.++++... ..
T Consensus 67 d~~------~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~v~~SS~~~~~~~~~~~~~ 139 (342)
T 2x4g_A 67 DHA------GLERALRGLDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQA-RVPRILYVGSAYAMPRHPQGLPG 139 (342)
T ss_dssp CHH------HHHHHTTTCSEEEEC------------CHHHHHHHHHHHHHHHHHHH-TCSCEEEECCGGGSCCCTTSSCB
T ss_pred CHH------HHHHHHcCCCEEEECCccCcCCCCCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEECCHHhhCcCCCCCCC
Confidence 865 889999999999999997653 2455678899999999999999995 889999999998776432 22
Q ss_pred ccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhhCCCCEEEeecceeecccC-CCCc
Q psy6053 257 YEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMNNGMPCLMLRPSIIIPVWR-EPLP 335 (614)
Q Consensus 257 ~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~~glp~~IvRp~~I~g~~~-~p~~ 335 (614)
+|+..+.|.. ...+.|+.||+.+|++++.+...|++++++||+.|||+.. .+
T Consensus 140 ~E~~~~~p~~-------------------------~~~~~Y~~sK~~~e~~~~~~~~~g~~~~ilrp~~v~g~~~~~~-- 192 (342)
T 2x4g_A 140 HEGLFYDSLP-------------------------SGKSSYVLCKWALDEQAREQARNGLPVVIGIPGMVLGELDIGP-- 192 (342)
T ss_dssp CTTCCCSSCC-------------------------TTSCHHHHHHHHHHHHHHHHHHTTCCEEEEEECEEECSCCSSC--
T ss_pred CCCCCCCccc-------------------------cccChHHHHHHHHHHHHHHHhhcCCcEEEEeCCceECCCCccc--
Confidence 4543322200 0137899999999999998764489999999999999865 21
Q ss_pred cccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEeccCCcccccHHHHHHH
Q psy6053 336 GWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLTSSQEWQVSWQEIIDI 415 (614)
Q Consensus 336 gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~~~~~~~it~~e~~~~ 415 (614)
+ ...++..+..|....+ ++...++++++|+|++++.++.+.. .+++||++++ + +|+.|+++.
T Consensus 193 ----~---~~~~~~~~~~~~~~~~---~~~~~~~i~v~Dva~~~~~~~~~~~-----~g~~~~v~~~--~-~s~~e~~~~ 254 (342)
T 2x4g_A 193 ----T---TGRVITAIGNGEMTHY---VAGQRNVIDAAEAGRGLLMALERGR-----IGERYLLTGH--N-LEMADLTRR 254 (342)
T ss_dssp ----S---TTHHHHHHHTTCCCEE---ECCEEEEEEHHHHHHHHHHHHHHSC-----TTCEEEECCE--E-EEHHHHHHH
T ss_pred ----c---HHHHHHHHHcCCCccc---cCCCcceeeHHHHHHHHHHHHhCCC-----CCceEEEcCC--c-ccHHHHHHH
Confidence 1 2234555556654433 5678899999999999999987643 3789999998 7 999999999
Q ss_pred HhhhcccccC
Q psy6053 416 GKSIVTTEVP 425 (614)
Q Consensus 416 ~~~~~g~~~p 425 (614)
+.+.+|.+.+
T Consensus 255 i~~~~g~~~~ 264 (342)
T 2x4g_A 255 IAELLGQPAP 264 (342)
T ss_dssp HHHHHTCCCC
T ss_pred HHHHhCCCCC
Confidence 9999887654
No 28
>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*
Probab=99.98 E-value=2.7e-32 Score=292.62 Aligned_cols=283 Identities=14% Similarity=0.064 Sum_probs=196.4
Q ss_pred cccCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcC--------------HHHHHHHHHhChhhHHhhhh
Q psy6053 98 ETFTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKN--------------ARQRIEELFASPLFNLLKSV 163 (614)
Q Consensus 98 ~~~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~--------------~~~Rl~~~~~~~~f~~l~~~ 163 (614)
.+.++++|||||||||||++|+++|++.|++ |+++.|...... ..+++.+... .
T Consensus 7 ~~~~~~~vlVTG~tGfIG~~l~~~L~~~G~~---V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~---------~ 74 (404)
T 1i24_A 7 HHHHGSRVMVIGGDGYCGWATALHLSKKNYE---VCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKA---------L 74 (404)
T ss_dssp -----CEEEEETTTSHHHHHHHHHHHHTTCE---EEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHH---------H
T ss_pred cccCCCeEEEeCCCcHHHHHHHHHHHhCCCe---EEEEEecCccccccccccccccccchhhhhhhhHhh---------c
Confidence 4567899999999999999999999999876 888887532110 0112221110 0
Q ss_pred ccccccCeEEEEeCCCCCCCCCCCHHHHHHHhcc--ccEEEEcccccChhH------HHHHHHHHhHHHHHHHHHHHHHc
Q psy6053 164 HGQKIIDKVLPISGDAEADELAIKESDRQLLASE--VDIMIHGAATIRFDE------ALKKAVLLNTRGTKMMLSLAKEM 235 (614)
Q Consensus 164 ~p~~~~~~v~~v~gDl~~~~lGLs~~~~~~l~~~--vd~ViH~AA~v~~~~------~~~~~~~~Nv~gt~~ll~la~~~ 235 (614)
...+++++.+|+++++ ++..++++ +|+|||+||...... .+...+++|+.||.+++++|++.
T Consensus 75 ----~~~~v~~~~~Dl~d~~------~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~ 144 (404)
T 1i24_A 75 ----TGKSIELYVGDICDFE------FLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEF 144 (404)
T ss_dssp ----HCCCCEEEESCTTSHH------HHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ----cCCceEEEECCCCCHH------HHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHh
Confidence 1246889999999865 78888887 999999999875432 12347799999999999999985
Q ss_pred CCC-ceEEEEeCceeccCCc-ccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh
Q psy6053 236 KHL-ELFVHISTAYCHLQEK-VLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN 313 (614)
Q Consensus 236 ~~~-k~~V~vST~~~~~~~~-~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~ 313 (614)
+. ++|||+||.++++... +++|+.++... ...+...+ ......+.|+.||+.+|+++..+..
T Consensus 145 -~~~~~~V~~SS~~vyg~~~~~~~E~~~~~~~--------------~~~~~~~~-~~~~~~~~Y~~sK~~~e~~~~~~~~ 208 (404)
T 1i24_A 145 -GEECHLVKLGTMGEYGTPNIDIEEGYITITH--------------NGRTDTLP-YPKQASSFYHLSKVHDSHNIAFTCK 208 (404)
T ss_dssp -CTTCEEEEECCGGGGCCCSSCBCSSEEEEEE--------------TTEEEEEE-CCCCCCSHHHHHHHHHHHHHHHHHH
T ss_pred -CCCcEEEEeCcHHHhCCCCCCCCcccccccc--------------cccccccc-CCCCCCChhHHHHHHHHHHHHHHHH
Confidence 65 5999999998776543 44443110000 00000000 0011237899999999999988765
Q ss_pred -CCCCEEEeecceeecccCCC---CccccCCC-------CchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHH
Q psy6053 314 -NGMPCLMLRPSIIIPVWREP---LPGWTDNI-------NGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVA 382 (614)
Q Consensus 314 -~glp~~IvRp~~I~g~~~~p---~~gw~d~~-------~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~ 382 (614)
.|++++++||+.|||+...+ .++|++.. .....++..+..|....+++++++.++++||+|+|++++.+
T Consensus 209 ~~gi~~~ivrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~ 288 (404)
T 1i24_A 209 AWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIA 288 (404)
T ss_dssp HHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHH
T ss_pred hcCCeEEEEecceeeCCCCCccccccccccccccccchhhHHHHHHHHHHcCCeeEEeCCCCceECcEEHHHHHHHHHHH
Confidence 58999999999999997654 12232211 11334666667776666778889999999999999999999
Q ss_pred HHhhhhcCCCCc--cEEEeccCCcccccHHHHHHHHhhh---cccccC
Q psy6053 383 IWAYLSQKEHRQ--SIVHLTSSQEWQVSWQEIIDIGKSI---VTTEVP 425 (614)
Q Consensus 383 ~~~~~~~~~~~~--~vyni~~~~~~~it~~e~~~~~~~~---~g~~~p 425 (614)
+..... .+ ++||+++ +++|+.|+++.+.+. +|.+.+
T Consensus 289 l~~~~~----~g~~~~yni~~---~~~s~~e~~~~i~~~~~~~g~~~~ 329 (404)
T 1i24_A 289 IANPAK----AGEFRVFNQFT---EQFSVNELASLVTKAGSKLGLDVK 329 (404)
T ss_dssp HHSCCC----TTCEEEEEECS---EEEEHHHHHHHHHHHHHTTTCCCC
T ss_pred HhCccc----CCCceEEEECC---CCCcHHHHHHHHHHHHHhhCCCcc
Confidence 876431 34 7999986 469999999999987 676544
No 29
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=99.98 E-value=2.6e-32 Score=279.20 Aligned_cols=270 Identities=14% Similarity=0.069 Sum_probs=203.2
Q ss_pred CCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCC
Q psy6053 101 TGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAE 180 (614)
Q Consensus 101 ~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~ 180 (614)
++|+||||| +||||++|+++|++.|++ |++++|+... ...+++++.+|++
T Consensus 2 ~~~~ilVtG-aG~iG~~l~~~L~~~g~~---V~~~~r~~~~--------------------------~~~~~~~~~~Dl~ 51 (286)
T 3gpi_A 2 SLSKILIAG-CGDLGLELARRLTAQGHE---VTGLRRSAQP--------------------------MPAGVQTLIADVT 51 (286)
T ss_dssp CCCCEEEEC-CSHHHHHHHHHHHHTTCC---EEEEECTTSC--------------------------CCTTCCEEECCTT
T ss_pred CCCcEEEEC-CCHHHHHHHHHHHHCCCE---EEEEeCCccc--------------------------cccCCceEEccCC
Confidence 468999999 599999999999999987 8999998643 2256889999999
Q ss_pred CCCCCCCHHHHHHHhcc-ccEEEEcccccChhHHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEeCceeccCCc--ccc
Q psy6053 181 ADELAIKESDRQLLASE-VDIMIHGAATIRFDEALKKAVLLNTRGTKMMLSLAKEMKHLELFVHISTAYCHLQEK--VLY 257 (614)
Q Consensus 181 ~~~lGLs~~~~~~l~~~-vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vST~~~~~~~~--~i~ 257 (614)
+++ .+..++++ +|+|||+||... .......++|+.||.+++++|++ .++++|||+||.++++... +++
T Consensus 52 d~~------~~~~~~~~~~d~vih~a~~~~--~~~~~~~~~n~~~~~~ll~a~~~-~~~~~~v~~SS~~vyg~~~~~~~~ 122 (286)
T 3gpi_A 52 RPD------TLASIVHLRPEILVYCVAASE--YSDEHYRLSYVEGLRNTLSALEG-APLQHVFFVSSTGVYGQEVEEWLD 122 (286)
T ss_dssp CGG------GCTTGGGGCCSEEEECHHHHH--HC-----CCSHHHHHHHHHHTTT-SCCCEEEEEEEGGGCCCCCSSEEC
T ss_pred ChH------HHHHhhcCCCCEEEEeCCCCC--CCHHHHHHHHHHHHHHHHHHHhh-CCCCEEEEEcccEEEcCCCCCCCC
Confidence 876 67777777 999999999743 34566789999999999999998 5899999999998776543 566
Q ss_pred cccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhhCCCCEEEeecceeecccCCCCccc
Q psy6053 258 EKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMNNGMPCLMLRPSIIIPVWREPLPGW 337 (614)
Q Consensus 258 E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~~glp~~IvRp~~I~g~~~~p~~gw 337 (614)
|+....|. +.|+.||+.+|++ .++ ++++|+||+.|||+...
T Consensus 123 E~~~~~p~-----------------------------~~Y~~sK~~~E~~-~~~----~~~~ilR~~~v~G~~~~----- 163 (286)
T 3gpi_A 123 EDTPPIAK-----------------------------DFSGKRMLEAEAL-LAA----YSSTILRFSGIYGPGRL----- 163 (286)
T ss_dssp TTSCCCCC-----------------------------SHHHHHHHHHHHH-GGG----SSEEEEEECEEEBTTBC-----
T ss_pred CCCCCCCC-----------------------------ChhhHHHHHHHHH-Hhc----CCeEEEecccccCCCch-----
Confidence 66443332 7899999999999 554 89999999999998642
Q ss_pred cCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEeccCCcccccHHHHHHHHh
Q psy6053 338 TDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLTSSQEWQVSWQEIIDIGK 417 (614)
Q Consensus 338 ~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~~~~~~~it~~e~~~~~~ 417 (614)
.++..+.. . ...++++...++++++|+|++++.++.++.. ...+++||++++ +++|+.|+++.+.
T Consensus 164 --------~~~~~~~~-~--~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~--~~~~~~~~~~~~--~~~s~~e~~~~i~ 228 (286)
T 3gpi_A 164 --------RMIRQAQT-P--EQWPARNAWTNRIHRDDGAAFIAYLIQQRSH--AVPERLYIVTDN--QPLPVHDLLRWLA 228 (286)
T ss_dssp --------HHHHHTTC-G--GGSCSSBCEECEEEHHHHHHHHHHHHHHHTT--SCCCSEEEECCS--CCEEHHHHHHHHH
T ss_pred --------hHHHHHHh-c--ccCCCcCceeEEEEHHHHHHHHHHHHhhhcc--CCCCceEEEeCC--CCCCHHHHHHHHH
Confidence 23333333 2 2246788999999999999999999987521 126789999998 8899999999999
Q ss_pred hhcccccCCCCccccCCcccccchhHHHHHHHHHhhhHHHHHHHHHHHhCCChHHHHHHHHHHHHH
Q psy6053 418 SIVTTEVPLNGCVWYPGGSMKSNRLLHQICVIFFHMIPAYFLDAIIFLSGNKPCLVKIQDRINKGF 483 (614)
Q Consensus 418 ~~~g~~~p~~~~~~~p~~~~~~~~~~~~~~~~~~~~~pa~~~d~~~~~~G~~P~~~~l~~ki~~~~ 483 (614)
+.+|.+.+.......+.. .. .-.+.+ +.+||+|+...+.+.+.+..
T Consensus 229 ~~~g~~~~~~~~~~~~~~-----~~--------------~d~~k~-~~lG~~p~~~~l~e~l~~~~ 274 (286)
T 3gpi_A 229 DRQGIAYPAGATPPVQGN-----KK--------------LSNARL-LASGYQLIYPDYVSGYGALL 274 (286)
T ss_dssp HHTTCCCCCSCCCCBCSS-----CE--------------ECCHHH-HHTTCCCSSCSHHHHHHHHH
T ss_pred HHcCCCCCCCCCcccCCC-----eE--------------eeHHHH-HHcCCCCcCCcHHHHHHHHH
Confidence 999987665432111100 00 011233 37899998756777877733
No 30
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=99.98 E-value=6.1e-31 Score=274.81 Aligned_cols=256 Identities=14% Similarity=0.072 Sum_probs=196.7
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCCC
Q psy6053 102 GKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAEA 181 (614)
Q Consensus 102 ~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~~ 181 (614)
+|+|||||||||||++|+++|++.|++ |++++|...... .++++.+ . ...++.++.+|+++
T Consensus 14 ~~~vlVTGatG~iG~~l~~~L~~~g~~---V~~~~r~~~~~~-~~~~~~~---------~------~~~~~~~~~~Dl~d 74 (335)
T 1rpn_A 14 TRSALVTGITGQDGAYLAKLLLEKGYR---VHGLVARRSSDT-RWRLREL---------G------IEGDIQYEDGDMAD 74 (335)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCE---EEEEECCCSSCC-CHHHHHT---------T------CGGGEEEEECCTTC
T ss_pred CCeEEEECCCChHHHHHHHHHHHCCCe---EEEEeCCCcccc-ccchhhc---------c------ccCceEEEECCCCC
Confidence 689999999999999999999999865 999999865422 1222211 0 12468999999998
Q ss_pred CCCCCCHHHHHHHhcc--ccEEEEcccccChh---HHHHHHHHHhHHHHHHHHHHHHHcCCC-ceEEEEeCceeccCCc-
Q psy6053 182 DELAIKESDRQLLASE--VDIMIHGAATIRFD---EALKKAVLLNTRGTKMMLSLAKEMKHL-ELFVHISTAYCHLQEK- 254 (614)
Q Consensus 182 ~~lGLs~~~~~~l~~~--vd~ViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~la~~~~~~-k~~V~vST~~~~~~~~- 254 (614)
++ ++..++++ +|+|||+||..... ......+++|+.||.+++++|++. ++ ++|||+||.++++...
T Consensus 75 ~~------~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~v~~SS~~v~g~~~~ 147 (335)
T 1rpn_A 75 AC------SVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQF-SPETRFYQASTSEMFGLIQA 147 (335)
T ss_dssp HH------HHHHHHHHHCCSEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHH-CTTSEEEEEEEGGGGCSCSS
T ss_pred HH------HHHHHHHHcCCCEEEECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHh-CCCCeEEEEeCHHHhCCCCC
Confidence 65 78888875 69999999987653 345678899999999999999995 65 8999999998876543
Q ss_pred -ccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh-CCCCEEEeecceeecccCC
Q psy6053 255 -VLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN-NGMPCLMLRPSIIIPVWRE 332 (614)
Q Consensus 255 -~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~-~glp~~IvRp~~I~g~~~~ 332 (614)
+++|+..+.| .+.|+.||+.+|++++.+.. .+++++++||+.+||+...
T Consensus 148 ~~~~E~~~~~p-----------------------------~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~ 198 (335)
T 1rpn_A 148 ERQDENTPFYP-----------------------------RSPYGVAKLYGHWITVNYRESFGLHASSGILFNHESPLRG 198 (335)
T ss_dssp SSBCTTSCCCC-----------------------------CSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSC
T ss_pred CCCCcccCCCC-----------------------------CChhHHHHHHHHHHHHHHHHHcCCcEEEEeeCcccCCCCC
Confidence 5566543322 26899999999999998876 5899999999999998653
Q ss_pred CCccccCCCCchHHHHHHHhcCcee-eEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEeccCCcccccHHH
Q psy6053 333 PLPGWTDNINGPTGLLIGAGKGVIR-TMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLTSSQEWQVSWQE 411 (614)
Q Consensus 333 p~~gw~d~~~g~~~~~~~~~~g~~~-~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~~~~~~~it~~e 411 (614)
+ ++.. .....++..+..|... ..+++++..+++++|+|+|++++.++.++ .+++||++++ +++|+.|
T Consensus 199 ~--~~~~--~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~------~~~~~ni~~~--~~~s~~e 266 (335)
T 1rpn_A 199 I--EFVT--RKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQD------KADDYVVATG--VTTTVRD 266 (335)
T ss_dssp T--TSHH--HHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHHHSS------SCCCEEECCS--CEEEHHH
T ss_pred C--Ccch--HHHHHHHHHHHcCCCceEEeCCCcceeceEEHHHHHHHHHHHHhcC------CCCEEEEeCC--CCccHHH
Confidence 2 1100 0112344455566533 34678899999999999999999998753 2479999998 8899999
Q ss_pred HHHHHhhhccccc
Q psy6053 412 IIDIGKSIVTTEV 424 (614)
Q Consensus 412 ~~~~~~~~~g~~~ 424 (614)
+++.+.+.+|.+.
T Consensus 267 ~~~~i~~~~g~~~ 279 (335)
T 1rpn_A 267 MCQIAFEHVGLDY 279 (335)
T ss_dssp HHHHHHHTTTCCG
T ss_pred HHHHHHHHhCCCc
Confidence 9999999988753
No 31
>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*
Probab=99.98 E-value=4.5e-31 Score=276.32 Aligned_cols=310 Identities=15% Similarity=0.098 Sum_probs=212.3
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCC-cCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCCC
Q psy6053 103 KTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKG-KNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAEA 181 (614)
Q Consensus 103 ~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~-~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~~ 181 (614)
|+|||||||||||++++++|+++|++ |+++.|.... ....+++.+. ...++.++.+|+++
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G~~---V~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~Dl~~ 61 (338)
T 1udb_A 1 MRVLVTGGSGYIGSHTCVQLLQNGHD---VIILDNLCNSKRSVLPVIERL----------------GGKHPTFVEGDIRN 61 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCE---EEEEECCSSCCTTHHHHHHHH----------------HTSCCEEEECCTTC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCE---EEEEecCCCcchhHHHHHHhh----------------cCCcceEEEccCCC
Confidence 57999999999999999999999876 7888875432 2222222221 12467889999998
Q ss_pred CCCCCCHHHHHHHhc--cccEEEEcccccChh---HHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEeCceeccCCc--
Q psy6053 182 DELAIKESDRQLLAS--EVDIMIHGAATIRFD---EALKKAVLLNTRGTKMMLSLAKEMKHLELFVHISTAYCHLQEK-- 254 (614)
Q Consensus 182 ~~lGLs~~~~~~l~~--~vd~ViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vST~~~~~~~~-- 254 (614)
++ +++.+++ ++|+|||+||..... +.....+++|+.||.+++++|++. ++++|||+||.++++...
T Consensus 62 ~~------~~~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~iv~~SS~~~~g~~~~~ 134 (338)
T 1udb_A 62 EA------LMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAA-NVKNFIFSSSATVYGDNPKI 134 (338)
T ss_dssp HH------HHHHHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEEEGGGGCSCCSS
T ss_pred HH------HHHHHhhccCCCEEEECCccCccccchhcHHHHHHHHHHHHHHHHHHHHhc-CCCeEEEEccHHHhCCCCCC
Confidence 65 6777776 499999999976543 234567899999999999999984 789999999998776432
Q ss_pred ccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh-C-CCCEEEeecceeecccCC
Q psy6053 255 VLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN-N-GMPCLMLRPSIIIPVWRE 332 (614)
Q Consensus 255 ~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~-~-glp~~IvRp~~I~g~~~~ 332 (614)
+++|+....| ..+.|+.||+.+|++++.+.. . +++++++||+++||+...
T Consensus 135 ~~~e~~~~~~----------------------------~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~ 186 (338)
T 1udb_A 135 PYVESFPTGT----------------------------PQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPS 186 (338)
T ss_dssp SBCTTSCCCC----------------------------CSSHHHHHHHHHHHHHHHHHHHSTTCEEEEEEECEEECCCTT
T ss_pred CcCcccCCCC----------------------------CCChHHHHHHHHHHHHHHHHHhcCCCceEEEeeceecCCCcc
Confidence 4455422111 126899999999999998765 3 799999999999998643
Q ss_pred CCccccCC--CCchHHHHHHHhc--CceeeEee------CCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEeccC
Q psy6053 333 PLPGWTDN--INGPTGLLIGAGK--GVIRTMFC------DNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLTSS 402 (614)
Q Consensus 333 p~~gw~d~--~~g~~~~~~~~~~--g~~~~~~~------~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~~~ 402 (614)
...|.... .......+..... +....+++ ++++.+++|||+|+|++++.++..... ...+++||++++
T Consensus 187 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~~l~~~~~--~~~~~~yni~~~ 264 (338)
T 1udb_A 187 GDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLADGHVVAMEKLAN--KPGVHIYNLGAG 264 (338)
T ss_dssp SSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTT--CCEEEEEEESCS
T ss_pred cccccccccchhhHHHHHHHHHHhcCCCcEEecCcccCCCCceeeeeEEHHHHHHHHHHHHhhhhc--cCCCcEEEecCC
Confidence 33222111 1122333333333 22223333 467889999999999999998876421 012479999998
Q ss_pred CcccccHHHHHHHHhhhcccccCCCCccccCCcccccchhHHHHHHHHHhhhHHHHHHHHHHHhCCChHHHHHHHHHHHH
Q psy6053 403 QEWQVSWQEIIDIGKSIVTTEVPLNGCVWYPGGSMKSNRLLHQICVIFFHMIPAYFLDAIIFLSGNKPCLVKIQDRINKG 482 (614)
Q Consensus 403 ~~~~it~~e~~~~~~~~~g~~~p~~~~~~~p~~~~~~~~~~~~~~~~~~~~~pa~~~d~~~~~~G~~P~~~~l~~ki~~~ 482 (614)
+++|+.|+++.+.+.+|.+.|.......+... ... . .-.+.+.+.+||+|.. .+.+.+.+
T Consensus 265 --~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~---~~~-----------~--~d~~k~~~~lG~~p~~-~l~~~l~~- 324 (338)
T 1udb_A 265 --VGNSVLDVVNAFSKACGKPVNYHFAPRREGDL---PAY-----------W--ADASKADRELNWRVTR-TLDEMAQD- 324 (338)
T ss_dssp --CCEEHHHHHHHHHHHHTSCCCEEEECCCTTCC---SBC-----------C--BCCHHHHHHHCCCCCC-CHHHHHHH-
T ss_pred --CceeHHHHHHHHHHHhCCCCcceeCCCCCCch---hhh-----------h--cCHHHHHHHcCCCcCC-CHHHHHHH-
Confidence 88999999999999988765532111111100 000 0 0123445778999986 67777776
Q ss_pred Hhhhhhhh
Q psy6053 483 FEVFEYYA 490 (614)
Q Consensus 483 ~~~~~~f~ 490 (614)
.++||.
T Consensus 325 --~~~w~~ 330 (338)
T 1udb_A 325 --TWHWQS 330 (338)
T ss_dssp --HHHHHH
T ss_pred --HHHHHH
Confidence 445654
No 32
>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*
Probab=99.98 E-value=1.5e-31 Score=282.49 Aligned_cols=303 Identities=17% Similarity=0.177 Sum_probs=216.7
Q ss_pred cEEEEecccccccHHHHHHHHhh-CCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCCC
Q psy6053 103 KTLFMTGASGFLGKVLLEKILRK-SPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAEA 181 (614)
Q Consensus 103 ~~VLITGaTGFlG~~Ll~~Ll~~-g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~~ 181 (614)
|+|||||||||||++|+++|++. |++ |++++|....... +++.++ . ...+++++.+|+++
T Consensus 1 MkvlVTGasG~iG~~l~~~L~~~~g~~---V~~~~r~~~~~~~-~~~~~~---------~------~~~~~~~~~~Dl~d 61 (361)
T 1kew_A 1 MKILITGGAGFIGSAVVRHIIKNTQDT---VVNIDKLTYAGNL-ESLSDI---------S------ESNRYNFEHADICD 61 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHCSCE---EEEEECCCTTCCG-GGGTTT---------T------TCTTEEEEECCTTC
T ss_pred CEEEEECCCchHhHHHHHHHHhcCCCe---EEEEecCCCCCch-hhhhhh---------h------cCCCeEEEECCCCC
Confidence 57999999999999999999998 554 8999997532111 111100 0 12478999999998
Q ss_pred CCCCCCHHHHHHHhc--cccEEEEcccccChh---HHHHHHHHHhHHHHHHHHHHHHHc-CCCc-------eEEEEeCce
Q psy6053 182 DELAIKESDRQLLAS--EVDIMIHGAATIRFD---EALKKAVLLNTRGTKMMLSLAKEM-KHLE-------LFVHISTAY 248 (614)
Q Consensus 182 ~~lGLs~~~~~~l~~--~vd~ViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~la~~~-~~~k-------~~V~vST~~ 248 (614)
++ .+..+++ ++|+|||+||..... ......+++|+.||.+++++|.+. .+++ +|||+||.+
T Consensus 62 ~~------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~ 135 (361)
T 1kew_A 62 SA------EITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDE 135 (361)
T ss_dssp HH------HHHHHHHHHCCSEEEECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGG
T ss_pred HH------HHHHHHhhcCCCEEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHH
Confidence 65 7888887 899999999987643 345678999999999999999983 1666 999999987
Q ss_pred eccCCc------------ccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh-CC
Q psy6053 249 CHLQEK------------VLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN-NG 315 (614)
Q Consensus 249 ~~~~~~------------~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~-~g 315 (614)
+++... +++|+.... ..+.|+.||+.+|++++.+.. .|
T Consensus 136 v~g~~~~~~~~~~~~~~~~~~E~~~~~-----------------------------~~~~Y~~sK~~~e~~~~~~~~~~g 186 (361)
T 1kew_A 136 VYGDLPHPDEVENSVTLPLFTETTAYA-----------------------------PSSPYSASKASSDHLVRAWRRTYG 186 (361)
T ss_dssp GGCCCCCGGGSCTTSCCCCBCTTSCCC-----------------------------CCSHHHHHHHHHHHHHHHHHHHHC
T ss_pred HhCCCcccccccccccCCCCCCCCCCC-----------------------------CCCccHHHHHHHHHHHHHHHHHhC
Confidence 766432 344432211 137899999999999998766 58
Q ss_pred CCEEEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCcc
Q psy6053 316 MPCLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQS 395 (614)
Q Consensus 316 lp~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~ 395 (614)
++++++||+.|||+...+. .....++..+..|....++++++...++++++|+|++++.++.... .++
T Consensus 187 i~~~~vrp~~v~G~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~-----~g~ 254 (361)
T 1kew_A 187 LPTIVTNCSNNYGPYHFPE-------KLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHARALHMVVTEGK-----AGE 254 (361)
T ss_dssp CCEEEEEECEEESTTCCTT-------SHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHCC-----TTC
T ss_pred CcEEEEeeceeECCCCCcc-------cHHHHHHHHHHcCCCceEcCCCceeEeeEEHHHHHHHHHHHHhCCC-----CCC
Confidence 9999999999999875320 1122355556666655567888899999999999999999886532 578
Q ss_pred EEEeccCCcccccHHHHHHHHhhhcccccCCCCc-----cccCCcccccchhHHHHHHHHHhhhHHHHHHHHHHHhCCCh
Q psy6053 396 IVHLTSSQEWQVSWQEIIDIGKSIVTTEVPLNGC-----VWYPGGSMKSNRLLHQICVIFFHMIPAYFLDAIIFLSGNKP 470 (614)
Q Consensus 396 vyni~~~~~~~it~~e~~~~~~~~~g~~~p~~~~-----~~~p~~~~~~~~~~~~~~~~~~~~~pa~~~d~~~~~~G~~P 470 (614)
+||++++ .++++.|+++.+.+.+|.+.|...+ .+.+........+ ..-.+.+.+.+||+|
T Consensus 255 ~~~v~~~--~~~s~~e~~~~i~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~-------------~~d~~k~~~~lG~~p 319 (361)
T 1kew_A 255 TYNIGGH--NEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPGHDRRY-------------AIDAGKISRELGWKP 319 (361)
T ss_dssp EEEECCC--CEEEHHHHHHHHHHHHHHHSCCSSCGGGGEEEECCCTTCCCBC-------------CBCCHHHHHHHCCCC
T ss_pred EEEecCC--CeeeHHHHHHHHHHHhCCcCccccccccceeecCCCCccccee-------------ecCHHHHHHHhCCCC
Confidence 9999998 8899999999999998876553211 1111100000000 011244567789999
Q ss_pred HHHHHHHHHHHHHhhhhhhh
Q psy6053 471 CLVKIQDRINKGFEVFEYYA 490 (614)
Q Consensus 471 ~~~~l~~ki~~~~~~~~~f~ 490 (614)
.. .+.+.+.+ .++||.
T Consensus 320 ~~-~~~e~l~~---~~~~~~ 335 (361)
T 1kew_A 320 LE-TFESGIRK---TVEWYL 335 (361)
T ss_dssp SC-CHHHHHHH---HHHHHH
T ss_pred cc-CHHHHHHH---HHHHHH
Confidence 76 46777776 455554
No 33
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}
Probab=99.97 E-value=2.7e-31 Score=274.57 Aligned_cols=296 Identities=16% Similarity=0.074 Sum_probs=209.9
Q ss_pred CcEEEEecccccccHHHHHHHHhh--CCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 102 GKTLFMTGASGFLGKVLLEKILRK--SPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 102 ~~~VLITGaTGFlG~~Ll~~Ll~~--g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
+|+|||||||||||++|+++|++. |++ |++++|...... + ..+++++.+|+
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~---V~~~~r~~~~~~----~--------------------~~~~~~~~~D~ 54 (312)
T 2yy7_A 2 NPKILIIGACGQIGTELTQKLRKLYGTEN---VIASDIRKLNTD----V--------------------VNSGPFEVVNA 54 (312)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHHHCGGG---EEEEESCCCSCH----H--------------------HHSSCEEECCT
T ss_pred CceEEEECCccHHHHHHHHHHHHhCCCCE---EEEEcCCCcccc----c--------------------cCCCceEEecC
Confidence 478999999999999999999998 776 899999765421 0 12456889999
Q ss_pred CCCCCCCCHHHHHHHhc--cccEEEEcccccChh--HHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEeCceeccCCc-
Q psy6053 180 EADELAIKESDRQLLAS--EVDIMIHGAATIRFD--EALKKAVLLNTRGTKMMLSLAKEMKHLELFVHISTAYCHLQEK- 254 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~--~vd~ViH~AA~v~~~--~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vST~~~~~~~~- 254 (614)
++++ ++..+++ ++|+|||+||..... ......+++|+.||.+++++|++ .++++|||+||.++++...
T Consensus 55 ~d~~------~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~-~~~~~~v~~SS~~~~~~~~~ 127 (312)
T 2yy7_A 55 LDFN------QIEHLVEVHKITDIYLMAALLSATAEKNPAFAWDLNMNSLFHVLNLAKA-KKIKKIFWPSSIAVFGPTTP 127 (312)
T ss_dssp TCHH------HHHHHHHHTTCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHT-TSCSEEECCEEGGGCCTTSC
T ss_pred CCHH------HHHHHHhhcCCCEEEECCccCCCchhhChHHHHHHHHHHHHHHHHHHHH-cCCCEEEEeccHHHhCCCCC
Confidence 9865 7888887 899999999976532 44567899999999999999999 4889999999998876532
Q ss_pred --ccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh-CCCCEEEeecceeecccC
Q psy6053 255 --VLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN-NGMPCLMLRPSIIIPVWR 331 (614)
Q Consensus 255 --~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~-~glp~~IvRp~~I~g~~~ 331 (614)
+++|+....| .+.|+.||+.+|++++.+.. .|++++++||+.|||+..
T Consensus 128 ~~~~~e~~~~~~-----------------------------~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~g~~~ 178 (312)
T 2yy7_A 128 KENTPQYTIMEP-----------------------------STVYGISKQAGERWCEYYHNIYGVDVRSIRYPGLISWST 178 (312)
T ss_dssp SSSBCSSCBCCC-----------------------------CSHHHHHHHHHHHHHHHHHHHHCCEEECEEECEEECSSS
T ss_pred CCCccccCcCCC-----------------------------CchhHHHHHHHHHHHHHHHHhcCCcEEEEeCCeEecCCC
Confidence 4455432222 27899999999999988765 589999999999999876
Q ss_pred CCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEeccCCcccccHHH
Q psy6053 332 EPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLTSSQEWQVSWQE 411 (614)
Q Consensus 332 ~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~~~~~~~it~~e 411 (614)
.|-.+. .......+.....+.....+++++..+++++|+|+|++++.++.++... ...+++||+++ +++|+.|
T Consensus 179 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~-~~~~~~~ni~~---~~~s~~e 251 (312)
T 2yy7_A 179 PPGGGT---TDYAVDIFYKAIADKKYECFLSSETKMPMMYMDDAIDATINIMKAPVEK-IKIHSSYNLAA---MSFTPTE 251 (312)
T ss_dssp CCCSCT---TTHHHHHHHHHHHTSEEEESSCTTCCEEEEEHHHHHHHHHHHHHSCGGG-CCCSSCEECCS---EEECHHH
T ss_pred CCCCch---hhhHHHHHHHHHcCCCeEEecCCCceeeeeeHHHHHHHHHHHHhCcccc-cccCceEEeCC---CccCHHH
Confidence 542211 0112233333333333345677888999999999999999998765420 00247999984 5799999
Q ss_pred HHHHHhhhcccccCCCCccccCCcccccchhHHHHHHHHHhhhH-HHHHHHHHHHhCCChHHHHHHHHHHHHH
Q psy6053 412 IIDIGKSIVTTEVPLNGCVWYPGGSMKSNRLLHQICVIFFHMIP-AYFLDAIIFLSGNKPCLVKIQDRINKGF 483 (614)
Q Consensus 412 ~~~~~~~~~g~~~p~~~~~~~p~~~~~~~~~~~~~~~~~~~~~p-a~~~d~~~~~~G~~P~~~~l~~ki~~~~ 483 (614)
+++.+.+.+|. .++ .+.|.. + ..+ ....+ ..-.+.+.+.+||+|+. .+.+.+.+..
T Consensus 252 ~~~~i~~~~~~-~~i---~~~~~~-----~--~~~----~~~~~~~~d~~k~~~~lG~~p~~-~l~~~l~~~~ 308 (312)
T 2yy7_A 252 IANEIKKHIPE-FTI---TYEPDF-----R--QKI----ADSWPASIDDSQAREDWDWKHTF-DLESMTKDMI 308 (312)
T ss_dssp HHHHHHTTCTT-CEE---EECCCT-----H--HHH----HTTSCSSBCCHHHHHHHCCCCCC-CHHHHHHHHH
T ss_pred HHHHHHHHCCC-Cce---EeccCc-----c--ccc----cccccccCCHHHHHHHcCCCCCC-CHHHHHHHHH
Confidence 99999998772 111 122210 0 000 00000 11124456779999986 6777777643
No 34
>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*
Probab=99.97 E-value=2.9e-31 Score=274.65 Aligned_cols=292 Identities=17% Similarity=0.164 Sum_probs=212.1
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCCCC
Q psy6053 103 KTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAEAD 182 (614)
Q Consensus 103 ~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~~~ 182 (614)
|+|||||||||||++++++|++.|++ |+++.|....... . ...++.++.+|++++
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G~~---V~~~~r~~~~~~~---------------------~-~~~~~~~~~~Dl~~~ 55 (311)
T 2p5y_A 1 MRVLVTGGAGFIGSHIVEDLLARGLE---VAVLDNLATGKRE---------------------N-VPKGVPFFRVDLRDK 55 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCE---EEEECCCSSCCGG---------------------G-SCTTCCEECCCTTCH
T ss_pred CEEEEEeCCcHHHHHHHHHHHHCCCE---EEEEECCCcCchh---------------------h-cccCeEEEECCCCCH
Confidence 57999999999999999999999876 8888885432110 0 123577899999986
Q ss_pred CCCCCHHHHHHHhc--cccEEEEcccccChh---HHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEeCc-eeccC---C
Q psy6053 183 ELAIKESDRQLLAS--EVDIMIHGAATIRFD---EALKKAVLLNTRGTKMMLSLAKEMKHLELFVHISTA-YCHLQ---E 253 (614)
Q Consensus 183 ~lGLs~~~~~~l~~--~vd~ViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vST~-~~~~~---~ 253 (614)
+ +++++++ ++|+|||+||..... +.....+++|+.||.+++++|++. ++++|||+||. ++++. .
T Consensus 56 ~------~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~-~~~~iv~~SS~~~~~g~~~~~ 128 (311)
T 2p5y_A 56 E------GVERAFREFRPTHVSHQAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQY-GVEKLVFASTGGAIYGEVPEG 128 (311)
T ss_dssp H------HHHHHHHHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TCSEEEEEEEHHHHHCCCCTT
T ss_pred H------HHHHHHHhcCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCEEEEeCCChhhcCCCCCC
Confidence 5 7888777 799999999986643 345668899999999999999984 78999999998 66553 2
Q ss_pred cccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh-CCCCEEEeecceeecccCC
Q psy6053 254 KVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN-NGMPCLMLRPSIIIPVWRE 332 (614)
Q Consensus 254 ~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~-~glp~~IvRp~~I~g~~~~ 332 (614)
.+++|+..+.| .+.|+.||+.+|++++.+.. .|++++++||+.|||+...
T Consensus 129 ~~~~E~~~~~~-----------------------------~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~Gp~~~ 179 (311)
T 2p5y_A 129 ERAEETWPPRP-----------------------------KSPYAASKAAFEHYLSVYGQSYGLKWVSLRYGNVYGPRQD 179 (311)
T ss_dssp CCBCTTSCCCC-----------------------------CSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCC
T ss_pred CCcCCCCCCCC-----------------------------CChHHHHHHHHHHHHHHHHHHcCCCEEEEeeccccCcCCC
Confidence 25556533222 26899999999999988765 5899999999999999754
Q ss_pred CCccccCCCCc-hHHHHHHHhcCceeeEe-----eCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEeccCCccc
Q psy6053 333 PLPGWTDNING-PTGLLIGAGKGVIRTMF-----CDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLTSSQEWQ 406 (614)
Q Consensus 333 p~~gw~d~~~g-~~~~~~~~~~g~~~~~~-----~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~~~~~~~ 406 (614)
+.. ..+ ...++..+..|....++ ++++...++++++|+|++++.++.. .+++||++++ .+
T Consensus 180 ~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~-------~~~~~~i~~~--~~ 245 (311)
T 2p5y_A 180 PHG-----EAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVGDVAEAHALALFS-------LEGIYNVGTG--EG 245 (311)
T ss_dssp SSS-----TTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEECEEEHHHHHHHHHHHHHH-------CCEEEEESCS--CC
T ss_pred CCC-----cCcHHHHHHHHHHcCCCcEEEecccCCCCCeEEeeEEHHHHHHHHHHHHhC-------CCCEEEeCCC--CC
Confidence 210 011 12344445566655556 7788899999999999999998864 2579999998 88
Q ss_pred ccHHHHHHHHhhhcccccCCCCccccCCcccccchhHHHHHHHHHhhhHHHHHHHHHHHhCCChHHHHHHHHHHHHHhhh
Q psy6053 407 VSWQEIIDIGKSIVTTEVPLNGCVWYPGGSMKSNRLLHQICVIFFHMIPAYFLDAIIFLSGNKPCLVKIQDRINKGFEVF 486 (614)
Q Consensus 407 it~~e~~~~~~~~~g~~~p~~~~~~~p~~~~~~~~~~~~~~~~~~~~~pa~~~d~~~~~~G~~P~~~~l~~ki~~~~~~~ 486 (614)
+|+.|+++.+.+.+|.+.+.. +.|......... ..-.+.+.+ +||+|.. .+.+.+.+ .+
T Consensus 246 ~s~~e~~~~i~~~~g~~~~~~---~~~~~~~~~~~~-------------~~d~~k~~~-lg~~p~~-~~~~~l~~---~~ 304 (311)
T 2p5y_A 246 HTTREVLMAVAEAAGKAPEVQ---PAPPRPGDLERS-------------VLSPLKLMA-HGWRPKV-GFQEGIRL---TV 304 (311)
T ss_dssp EEHHHHHHHHHHHHTCCCCEE---EECCCTTCCSBC-------------CBCCHHHHT-TTCCCSS-CHHHHHHH---HH
T ss_pred ccHHHHHHHHHHHhCCCCCce---eCCCCccchhhc-------------cCCHHHHHH-CCCCCCC-CHHHHHHH---HH
Confidence 999999999999988765432 122110000000 001234456 8999987 67778776 44
Q ss_pred hhhh
Q psy6053 487 EYYA 490 (614)
Q Consensus 487 ~~f~ 490 (614)
+||.
T Consensus 305 ~~~~ 308 (311)
T 2p5y_A 305 DHFR 308 (311)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4553
No 35
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=99.97 E-value=2.1e-31 Score=276.70 Aligned_cols=292 Identities=11% Similarity=0.093 Sum_probs=207.1
Q ss_pred CCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCC
Q psy6053 101 TGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAE 180 (614)
Q Consensus 101 ~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~ 180 (614)
.+|+|||||||||||++|+++|++.|++ |+++.|.. .+|++
T Consensus 2 ~~~~ilVtGatG~iG~~l~~~L~~~g~~---v~~~~r~~------------------------------------~~D~~ 42 (321)
T 1e6u_A 2 AKQRVFIAGHRGMVGSAIRRQLEQRGDV---ELVLRTRD------------------------------------ELNLL 42 (321)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCTTE---EEECCCTT------------------------------------TCCTT
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCCCe---EEEEecCc------------------------------------cCCcc
Confidence 3689999999999999999999999875 77776641 26887
Q ss_pred CCCCCCCHHHHHHHhc--cccEEEEcccccCh----hHHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEeCceeccCC-
Q psy6053 181 ADELAIKESDRQLLAS--EVDIMIHGAATIRF----DEALKKAVLLNTRGTKMMLSLAKEMKHLELFVHISTAYCHLQE- 253 (614)
Q Consensus 181 ~~~lGLs~~~~~~l~~--~vd~ViH~AA~v~~----~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vST~~~~~~~- 253 (614)
+++ ++..+++ ++|+|||+||.... ..+....+++|+.||.+++++|++. ++++|||+||.++++..
T Consensus 43 d~~------~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~SS~~vyg~~~ 115 (321)
T 1e6u_A 43 DSR------AVHDFFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQN-DVNKLLFLGSSCIYPKLA 115 (321)
T ss_dssp CHH------HHHHHHHHHCCSEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEECCGGGSCTTC
T ss_pred CHH------HHHHHHHhcCCCEEEEcCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEccHHHcCCCC
Confidence 754 7888888 89999999998752 3445678899999999999999994 88999999999887643
Q ss_pred -cccccccCCC-CCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh-CCCCEEEeecceeeccc
Q psy6053 254 -KVLYEKPYPP-PTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN-NGMPCLMLRPSIIIPVW 330 (614)
Q Consensus 254 -~~i~E~~~~~-p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~-~glp~~IvRp~~I~g~~ 330 (614)
.+++|+.... +..|. .+.|+.||+.+|++++.+.. .+++++++||+.|||+.
T Consensus 116 ~~~~~E~~~~~~~~~p~-------------------------~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~ 170 (321)
T 1e6u_A 116 KQPMAESELLQGTLEPT-------------------------NEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPH 170 (321)
T ss_dssp CSSBCGGGTTSSCCCGG-------------------------GHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEESTT
T ss_pred CCCcCccccccCCCCCC-------------------------CCccHHHHHHHHHHHHHHHHHhCCCEEEEEeCCcCCcC
Confidence 2455543110 11110 14899999999999998765 58999999999999987
Q ss_pred CCCCccccCCCCch-HHHHHHHhc----C-ceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhc----CCCCccEEEec
Q psy6053 331 REPLPGWTDNINGP-TGLLIGAGK----G-VIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQ----KEHRQSIVHLT 400 (614)
Q Consensus 331 ~~p~~gw~d~~~g~-~~~~~~~~~----g-~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~----~~~~~~vyni~ 400 (614)
..+... ..+. ..++..+.. | ....++++++..++++||+|+|++++.++.+.... ....+++||++
T Consensus 171 ~~~~~~----~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~~~ni~ 246 (321)
T 1e6u_A 171 DNFHPS----NSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVG 246 (321)
T ss_dssp CCCCTT----CSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHHHHHHHHSCHHHHHHTSBTTBCCEEES
T ss_pred CCCCCC----CCccHHHHHHHHHHhhhcCCCceEEcCCCCEEEEeEEHHHHHHHHHHHHhCcccccccccccCCceEEeC
Confidence 643211 1122 234444332 3 33445788899999999999999999998765420 00125799999
Q ss_pred cCCcccccHHHHHHHHhhhcccccCCCCccccCCcccccchhHHHHHHHHHhhhHHHHHHHHHHHhCCChHHHHHHHHHH
Q psy6053 401 SSQEWQVSWQEIIDIGKSIVTTEVPLNGCVWYPGGSMKSNRLLHQICVIFFHMIPAYFLDAIIFLSGNKPCLVKIQDRIN 480 (614)
Q Consensus 401 ~~~~~~it~~e~~~~~~~~~g~~~p~~~~~~~p~~~~~~~~~~~~~~~~~~~~~pa~~~d~~~~~~G~~P~~~~l~~ki~ 480 (614)
++ +++|+.|+++.+.+.+|.+.++. +.|......... ..-.+.+.+ +||+|.. .+.+.+.
T Consensus 247 ~~--~~~s~~e~~~~i~~~~g~~~~~~---~~~~~~~~~~~~-------------~~d~~k~~~-lG~~p~~-~~~~~l~ 306 (321)
T 1e6u_A 247 TG--VDCTIRELAQTIAKVVGYKGRVV---FDASKPDGTPRK-------------LLDVTRLHQ-LGWYHEI-SLEAGLA 306 (321)
T ss_dssp CS--CCEEHHHHHHHHHHHHTCCSEEE---EETTSCCCCSBC-------------CBCCHHHHH-TTCCCCC-CHHHHHH
T ss_pred CC--CCccHHHHHHHHHHHhCCCCceE---eCCCCCCCcccc-------------cCCHHHHHh-cCCccCC-cHHHHHH
Confidence 98 88999999999999988764432 122110000000 011234456 8999976 5667777
Q ss_pred HHHhhhhhhh
Q psy6053 481 KGFEVFEYYA 490 (614)
Q Consensus 481 ~~~~~~~~f~ 490 (614)
+ .++||.
T Consensus 307 ~---~~~~~~ 313 (321)
T 1e6u_A 307 S---TYQWFL 313 (321)
T ss_dssp H---HHHHHH
T ss_pred H---HHHHHH
Confidence 6 455554
No 36
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=99.97 E-value=2.3e-32 Score=283.43 Aligned_cols=292 Identities=14% Similarity=0.078 Sum_probs=208.4
Q ss_pred CCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCH-HHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 101 TGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNA-RQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 101 ~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~-~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
.+|+|||||||||+|++|+++|++.|++ |++++|....... .+. +.... ...+++++.+|+
T Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~---V~~~~r~~~~~~~~~~~------------~~~~~---~~~~~~~~~~Dl 67 (321)
T 3vps_A 6 LKHRILITGGAGFIGGHLARALVASGEE---VTVLDDLRVPPMIPPEG------------TGKFL---EKPVLELEERDL 67 (321)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCC---EEEECCCSSCCSSCCTT------------SSEEE---CSCGGGCCHHHH
T ss_pred CCCeEEEECCCChHHHHHHHHHHHCCCE---EEEEecCCcccccchhh------------hhhhc---cCCCeeEEeCcc
Confidence 4689999999999999999999999987 8999998652100 000 00000 112344444444
Q ss_pred CCCCCCCCHHHHHHHhccccEEEEcccccChhH---HHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEeCceeccCCc--
Q psy6053 180 EADELAIKESDRQLLASEVDIMIHGAATIRFDE---ALKKAVLLNTRGTKMMLSLAKEMKHLELFVHISTAYCHLQEK-- 254 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~~vd~ViH~AA~v~~~~---~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vST~~~~~~~~-- 254 (614)
+ ++|+|||+||...... ......+ |+.||.+++++|++. ++++|||+||.++++...
T Consensus 68 ~----------------~~d~vi~~a~~~~~~~~~~~~~~~~~-n~~~~~~ll~a~~~~-~v~~~v~~SS~~v~~~~~~~ 129 (321)
T 3vps_A 68 S----------------DVRLVYHLASHKSVPRSFKQPLDYLD-NVDSGRHLLALCTSV-GVPKVVVGSTCEVYGQADTL 129 (321)
T ss_dssp T----------------TEEEEEECCCCCCHHHHTTSTTTTHH-HHHHHHHHHHHHHHH-TCCEEEEEEEGGGGCSCSSS
T ss_pred c----------------cCCEEEECCccCChHHHHhCHHHHHH-HHHHHHHHHHHHHHc-CCCeEEEecCHHHhCCCCCC
Confidence 3 7999999999876432 2233556 999999999999995 799999999998876543
Q ss_pred ccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh-CCC-CEEEeecceeecccCC
Q psy6053 255 VLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN-NGM-PCLMLRPSIIIPVWRE 332 (614)
Q Consensus 255 ~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~-~gl-p~~IvRp~~I~g~~~~ 332 (614)
+++|+....| .+.|+.||+.+|+++..+.. .|+ +++|+||+.|||+...
T Consensus 130 ~~~E~~~~~p-----------------------------~~~Y~~sK~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~ 180 (321)
T 3vps_A 130 PTPEDSPLSP-----------------------------RSPYAASKVGLEMVAGAHQRASVAPEVGIVRFFNVYGPGER 180 (321)
T ss_dssp SBCTTSCCCC-----------------------------CSHHHHHHHHHHHHHHHHHHSSSSCEEEEEEECEEECTTCC
T ss_pred CCCCCCCCCC-----------------------------CChhHHHHHHHHHHHHHHHHHcCCCceEEEEeccccCcCCC
Confidence 5666643333 27899999999999999887 689 9999999999998764
Q ss_pred CCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEeccCCcccccHHHH
Q psy6053 333 PLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLTSSQEWQVSWQEI 412 (614)
Q Consensus 333 p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~~~~~~~it~~e~ 412 (614)
+ + .....++..+..|....++++++..+++++++|+|++++.++.+.. .+ +||++++ +++|+.|+
T Consensus 181 ~------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~-----~g-~~~i~~~--~~~s~~e~ 245 (321)
T 3vps_A 181 P------D-ALVPRLCANLLTRNELPVEGDGEQRRDFTYITDVVDKLVALANRPL-----PS-VVNFGSG--QSLSVNDV 245 (321)
T ss_dssp T------T-SHHHHHHHHHHHHSEEEEETTSCCEECEEEHHHHHHHHHHGGGSCC-----CS-EEEESCS--CCEEHHHH
T ss_pred C------C-ChHHHHHHHHHcCCCeEEeCCCCceEceEEHHHHHHHHHHHHhcCC-----CC-eEEecCC--CcccHHHH
Confidence 3 0 1233455666677666677889999999999999999999887643 45 9999999 88999999
Q ss_pred HHHHhhhcccccCCCCccccCCcccccchhHHHHHHHHHhhhHHHHHHHHHHHhCCCh-HHHHHHHHHHHHHhhhhhhhc
Q psy6053 413 IDIGKSIVTTEVPLNGCVWYPGGSMKSNRLLHQICVIFFHMIPAYFLDAIIFLSGNKP-CLVKIQDRINKGFEVFEYYAN 491 (614)
Q Consensus 413 ~~~~~~~~g~~~p~~~~~~~p~~~~~~~~~~~~~~~~~~~~~pa~~~d~~~~~~G~~P-~~~~l~~ki~~~~~~~~~f~~ 491 (614)
++.+. .+|.+.++.. .|......... ..-.+.+.+.+||+| .. .+.+.+.+ .++||..
T Consensus 246 ~~~i~-~~g~~~~~~~---~~~~~~~~~~~-------------~~d~~k~~~~lG~~p~~~-~~~~~l~~---~~~~~~~ 304 (321)
T 3vps_A 246 IRILQ-ATSPAAEVAR---KQPRPNEITEF-------------RADTALQTRQIGERSGGI-GIEEGIRL---TLEWWQS 304 (321)
T ss_dssp HHHHH-TTCTTCEEEE---ECCCTTCCSBC-------------CBCCHHHHHHHCCCSCCC-CHHHHHHH---HHHHHHT
T ss_pred HHHHH-HhCCCCcccc---CCCCCCCccee-------------eccHHHHHHHhCCCCCcC-CHHHHHHH---HHHHHHh
Confidence 99999 8888755431 11110000000 011244566789999 54 67777776 5667765
Q ss_pred ce
Q psy6053 492 NQ 493 (614)
Q Consensus 492 ~~ 493 (614)
+.
T Consensus 305 ~~ 306 (321)
T 3vps_A 305 RD 306 (321)
T ss_dssp SC
T ss_pred CC
Confidence 54
No 37
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=99.97 E-value=2.6e-30 Score=271.33 Aligned_cols=299 Identities=19% Similarity=0.197 Sum_probs=212.8
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
.++|+|||||||||||++|+++|++.|++ |++++|...+.. +.+.++ . ...++.++.+|+
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~---V~~~~r~~~~~~--~~~~~~------------~---~~~~~~~~~~D~ 84 (343)
T 2b69_A 25 KDRKRILITGGAGFVGSHLTDKLMMDGHE---VTVVDNFFTGRK--RNVEHW------------I---GHENFELINHDV 84 (343)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEECCSSCCG--GGTGGG------------T---TCTTEEEEECCT
T ss_pred cCCCEEEEEcCccHHHHHHHHHHHHCCCE---EEEEeCCCccch--hhhhhh------------c---cCCceEEEeCcc
Confidence 56789999999999999999999999875 899999754321 001000 0 124689999999
Q ss_pred CCCCCCCCHHHHHHHhccccEEEEcccccChh---HHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEeCceeccCC--c
Q psy6053 180 EADELAIKESDRQLLASEVDIMIHGAATIRFD---EALKKAVLLNTRGTKMMLSLAKEMKHLELFVHISTAYCHLQE--K 254 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~~vd~ViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vST~~~~~~~--~ 254 (614)
.++. +.++|+|||+||..... ......+++|+.||.+++++|++. +. +|||+||.++++.. .
T Consensus 85 ~~~~-----------~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~-~~v~~SS~~v~g~~~~~ 151 (343)
T 2b69_A 85 VEPL-----------YIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRV-GA-RLLLASTSEVYGDPEVH 151 (343)
T ss_dssp TSCC-----------CCCCSEEEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHH-TC-EEEEEEEGGGGBSCSSS
T ss_pred CChh-----------hcCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHh-CC-cEEEECcHHHhCCCCCC
Confidence 9865 35799999999987642 345677899999999999999995 55 89999999877654 2
Q ss_pred ccccccCCC--CCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh-CCCCEEEeecceeecccC
Q psy6053 255 VLYEKPYPP--PTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN-NGMPCLMLRPSIIIPVWR 331 (614)
Q Consensus 255 ~i~E~~~~~--p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~-~glp~~IvRp~~I~g~~~ 331 (614)
+++|+.+.. |.. ..+.|+.||+.+|+++..+.. .|++++++||+.|||+..
T Consensus 152 ~~~E~~~~~~~~~~--------------------------~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~ 205 (343)
T 2b69_A 152 PQSEDYWGHVNPIG--------------------------PRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRM 205 (343)
T ss_dssp SBCTTCCCBCCSSS--------------------------TTHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTC
T ss_pred CCcccccccCCCCC--------------------------CCCchHHHHHHHHHHHHHHHHHhCCcEEEEEEcceeCcCC
Confidence 556653211 111 126799999999999988765 599999999999999875
Q ss_pred CCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEeccCCcccccHHH
Q psy6053 332 EPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLTSSQEWQVSWQE 411 (614)
Q Consensus 332 ~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~~~~~~~it~~e 411 (614)
.+..+ .....++..+..|....++++++..+++++|+|+|++++.++... .+++||++++ +++|+.|
T Consensus 206 ~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~------~~~~~~i~~~--~~~s~~e 272 (343)
T 2b69_A 206 HMNDG-----RVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSN------VSSPVNLGNP--EEHTILE 272 (343)
T ss_dssp CTTCC-----CHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHTSS------CCSCEEESCC--CEEEHHH
T ss_pred CCCcc-----cHHHHHHHHHHcCCCceEcCCCCeEEeeEeHHHHHHHHHHHHhcC------CCCeEEecCC--CCCcHHH
Confidence 43211 112345555666666566788899999999999999999887532 3579999998 8899999
Q ss_pred HHHHHhhhcccccCCCCccccCCcccccchhHHHHHHHHHhhhHHHHHHHHHHHhCCChHHHHHHHHHHHHHhhhhhhh
Q psy6053 412 IIDIGKSIVTTEVPLNGCVWYPGGSMKSNRLLHQICVIFFHMIPAYFLDAIIFLSGNKPCLVKIQDRINKGFEVFEYYA 490 (614)
Q Consensus 412 ~~~~~~~~~g~~~p~~~~~~~p~~~~~~~~~~~~~~~~~~~~~pa~~~d~~~~~~G~~P~~~~l~~ki~~~~~~~~~f~ 490 (614)
+++.+.+.+|.+.++. +.|......... ..-.+.+.+.+||+|.. .+.+.+.+ .++||.
T Consensus 273 ~~~~i~~~~g~~~~~~---~~p~~~~~~~~~-------------~~d~~k~~~~lG~~p~~-~l~e~l~~---~~~~~~ 331 (343)
T 2b69_A 273 FAQLIKNLVGSGSEIQ---FLSEAQDDPQKR-------------KPDIKKAKLMLGWEPVV-PLEEGLNK---AIHYFR 331 (343)
T ss_dssp HHHHHHHHHTCCCCEE---EECCCTTCCCCC-------------CBCCHHHHHHHCCCCCS-CHHHHHHH---HHHHHH
T ss_pred HHHHHHHHhCCCCCce---eCCCCCCCCcee-------------cCCHHHHHHHcCCCCCC-CHHHHHHH---HHHHHH
Confidence 9999999988764432 122110000000 00123456788999976 56777776 444553
No 38
>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2
Probab=99.97 E-value=6.9e-30 Score=293.42 Aligned_cols=325 Identities=17% Similarity=0.108 Sum_probs=223.5
Q ss_pred ccCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcC-HHHHHHHHHhChhhHHhhhhccccccCeEEEEeC
Q psy6053 99 TFTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKN-ARQRIEELFASPLFNLLKSVHGQKIIDKVLPISG 177 (614)
Q Consensus 99 ~~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~-~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~g 177 (614)
.+++|+|||||||||||++|+++|+++|++ |++++|...... ..++++.+ ...++.++.+
T Consensus 8 ~~~~~~ilVTGatG~IG~~l~~~L~~~G~~---V~~~~r~~~~~~~~~~~l~~~----------------~~~~v~~v~~ 68 (699)
T 1z45_A 8 ESTSKIVLVTGGAGYIGSHTVVELIENGYD---CVVADNLSNSTYDSVARLEVL----------------TKHHIPFYEV 68 (699)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEECCSSCCTHHHHHHHHH----------------HTSCCCEEEC
T ss_pred ccCCCEEEEECCCCHHHHHHHHHHHHCcCE---EEEEECCCcchHHHHHHHhhc----------------cCCceEEEEc
Confidence 356899999999999999999999999865 899998764432 22223221 1246888999
Q ss_pred CCCCCCCCCCHHHHHHHhc--cccEEEEcccccChh---HHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEeCceeccC
Q psy6053 178 DAEADELAIKESDRQLLAS--EVDIMIHGAATIRFD---EALKKAVLLNTRGTKMMLSLAKEMKHLELFVHISTAYCHLQ 252 (614)
Q Consensus 178 Dl~~~~lGLs~~~~~~l~~--~vd~ViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vST~~~~~~ 252 (614)
|+++++ .+..+++ ++|+|||+||..... ......+++|+.||.+++++|++. ++++|||+||.++++.
T Consensus 69 Dl~d~~------~l~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~-~~~~iV~~SS~~vyg~ 141 (699)
T 1z45_A 69 DLCDRK------GLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQY-NVSKFVFSSSATVYGD 141 (699)
T ss_dssp CTTCHH------HHHHHHHHSCCCEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEEEGGGGCC
T ss_pred CCCCHH------HHHHHHHhCCCCEEEECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEECcHHHhCC
Confidence 999865 7888887 799999999987643 234567899999999999999985 7899999999988764
Q ss_pred Cc------ccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh---CCCCEEEeec
Q psy6053 253 EK------VLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN---NGMPCLMLRP 323 (614)
Q Consensus 253 ~~------~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~---~glp~~IvRp 323 (614)
.. +++|+....| .+.|+.||+.+|++++.+.. .+++++|+||
T Consensus 142 ~~~~~~~~~~~E~~~~~p-----------------------------~~~Y~~sK~~~E~~~~~~~~~~~~g~~~~ilR~ 192 (699)
T 1z45_A 142 ATRFPNMIPIPEECPLGP-----------------------------TNPYGHTKYAIENILNDLYNSDKKSWKFAILRY 192 (699)
T ss_dssp GGGSTTCCSBCTTSCCCC-----------------------------CSHHHHHHHHHHHHHHHHHHHSTTSCEEEEEEE
T ss_pred CccccccCCccccCCCCC-----------------------------CChHHHHHHHHHHHHHHHHHhccCCCcEEEEEe
Confidence 32 3444322111 27899999999999988754 4899999999
Q ss_pred ceeecccCCCCccccCC--CCchHHHHHHHhcC--ceeeEee------CCCccccceeHHHHHHHHHHHHHhhhhc--CC
Q psy6053 324 SIIIPVWREPLPGWTDN--INGPTGLLIGAGKG--VIRTMFC------DNTGYADFLPVDITINGIFVAIWAYLSQ--KE 391 (614)
Q Consensus 324 ~~I~g~~~~p~~gw~d~--~~g~~~~~~~~~~g--~~~~~~~------~~~~~~d~vpVDdva~aii~~~~~~~~~--~~ 391 (614)
+.|||+....+.|-.+. .......+.....+ ....+++ +++..+++|||+|+|++++.++...... ..
T Consensus 193 ~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~a~~~~~~~~~~~ 272 (699)
T 1z45_A 193 FNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRDYIHVVDLAKGHIAALQYLEAYNENE 272 (699)
T ss_dssp CEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSCEECEEEHHHHHHHHHHHHHHHHHSCTTC
T ss_pred ccccCCCcccccccccccchhHHHHHHHHHHhcCCCceEEeCCcccCCCCCeeEeeEEHHHHHHHHHHHHhhhhcccccc
Confidence 99999864332221110 11223344444433 2223344 5788999999999999999998754210 01
Q ss_pred CCccEEEeccCCcccccHHHHHHHHhhhcccccCCCCccccCCcccccchhHHHHHHHHHhhhHHHHHHHHHHHhCCChH
Q psy6053 392 HRQSIVHLTSSQEWQVSWQEIIDIGKSIVTTEVPLNGCVWYPGGSMKSNRLLHQICVIFFHMIPAYFLDAIIFLSGNKPC 471 (614)
Q Consensus 392 ~~~~vyni~~~~~~~it~~e~~~~~~~~~g~~~p~~~~~~~p~~~~~~~~~~~~~~~~~~~~~pa~~~d~~~~~~G~~P~ 471 (614)
..+++||++++ +++|+.|+++.+.+.+|.+.|... .|....... ....-.+.+.+.+||+|.
T Consensus 273 ~~~~~yni~~~--~~~s~~el~~~i~~~~g~~~~~~~---~~~~~~~~~-------------~~~~d~~ka~~~LG~~p~ 334 (699)
T 1z45_A 273 GLCREWNLGSG--KGSTVFEVYHAFCKASGIDLPYKV---TGRRAGDVL-------------NLTAKPDRAKRELKWQTE 334 (699)
T ss_dssp CEEEEEEESCS--CCEEHHHHHHHHHHHHTCCCCC------------CC-------------CCCBCCHHHHHHTCCCCC
T ss_pred CCceEEEECCC--CCCcHHHHHHHHHHHhCCCCCcee---cCCCCCccc-------------cccCCHHHHHHhcCCCCC
Confidence 23579999998 889999999999999898765431 111000000 000112345678999997
Q ss_pred HHHHHHHHHHHHhhhhhhhcceEEEechh
Q psy6053 472 LVKIQDRINKGFEVFEYYANNQWEFRNEY 500 (614)
Q Consensus 472 ~~~l~~ki~~~~~~~~~f~~~~w~f~~~n 500 (614)
. .+.+.+.+ .++||..+.+.|...+
T Consensus 335 ~-~l~egl~~---~~~w~~~~~~~~~~~~ 359 (699)
T 1z45_A 335 L-QVEDSCKD---LWKWTTENPFGYQLRG 359 (699)
T ss_dssp C-CHHHHHHH---HHHHHHHCTTCSCCTT
T ss_pred C-CHHHHHHH---HHHHHHhCCcchhhhh
Confidence 6 67788877 5567766666666654
No 39
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=99.97 E-value=8.2e-30 Score=266.88 Aligned_cols=256 Identities=16% Similarity=0.069 Sum_probs=194.8
Q ss_pred CCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCC
Q psy6053 101 TGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAE 180 (614)
Q Consensus 101 ~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~ 180 (614)
++|+|||||||||||++++++|++.|++ |++++|....... ++++++. ...+++++.+|++
T Consensus 2 ~~~~vlVtGatG~iG~~l~~~L~~~G~~---V~~~~r~~~~~~~-~~~~~~~---------------~~~~~~~~~~Dl~ 62 (345)
T 2z1m_A 2 SGKRALITGIRGQDGAYLAKLLLEKGYE---VYGADRRSGEFAS-WRLKELG---------------IENDVKIIHMDLL 62 (345)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCE---EEEECSCCSTTTT-HHHHHTT---------------CTTTEEECCCCTT
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCE---EEEEECCCccccc-ccHhhcc---------------ccCceeEEECCCC
Confidence 5789999999999999999999999876 8999998654321 2222210 1246889999999
Q ss_pred CCCCCCCHHHHHHHhcc--ccEEEEcccccChh---HHHHHHHHHhHHHHHHHHHHHHHcCCC-ceEEEEeCceeccCCc
Q psy6053 181 ADELAIKESDRQLLASE--VDIMIHGAATIRFD---EALKKAVLLNTRGTKMMLSLAKEMKHL-ELFVHISTAYCHLQEK 254 (614)
Q Consensus 181 ~~~lGLs~~~~~~l~~~--vd~ViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~la~~~~~~-k~~V~vST~~~~~~~~ 254 (614)
+++ ++.+++++ +|+|||+||..... +.+...+++|+.||.+++++|.++ ++ ++|||+||.++++...
T Consensus 63 d~~------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-~~~~~iv~~SS~~vyg~~~ 135 (345)
T 2z1m_A 63 EFS------NIIRTIEKVQPDEVYNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTV-KPDTKFYQASTSEMFGKVQ 135 (345)
T ss_dssp CHH------HHHHHHHHHCCSEEEECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHH-CTTCEEEEEEEGGGGCSCS
T ss_pred CHH------HHHHHHHhcCCCEEEECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCceEEEEechhhcCCCC
Confidence 865 78888875 59999999987643 346678899999999999999986 65 8999999998776543
Q ss_pred --ccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh-CCCCEEEeecceeecccC
Q psy6053 255 --VLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN-NGMPCLMLRPSIIIPVWR 331 (614)
Q Consensus 255 --~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~-~glp~~IvRp~~I~g~~~ 331 (614)
+++|+....| .+.|+.||+.+|++++.+.. .++++++.|+.+++|+..
T Consensus 136 ~~~~~e~~~~~~-----------------------------~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~ 186 (345)
T 2z1m_A 136 EIPQTEKTPFYP-----------------------------RSPYAVAKLFGHWITVNYREAYNMFACSGILFNHESPLR 186 (345)
T ss_dssp SSSBCTTSCCCC-----------------------------CSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTS
T ss_pred CCCCCccCCCCC-----------------------------CChhHHHHHHHHHHHHHHHHHhCCceEeeeeeeecCCCC
Confidence 4555432222 26899999999999998876 589999999999999853
Q ss_pred CCCccccCCCCc--hHHHHHHHhcCce-eeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEeccCCccccc
Q psy6053 332 EPLPGWTDNING--PTGLLIGAGKGVI-RTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLTSSQEWQVS 408 (614)
Q Consensus 332 ~p~~gw~d~~~g--~~~~~~~~~~g~~-~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~~~~~~~it 408 (614)
. ++... ...++..+..|.. ....++++..+++++++|+|++++.++.+. .+++||++++ ++++
T Consensus 187 ~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~a~~~~~~~~------~~~~~~i~~~--~~~s 252 (345)
T 2z1m_A 187 G------IEFVTRKITYSLARIKYGLQDKLVLGNLNAKRDWGYAPEYVEAMWLMMQQP------EPDDYVIATG--ETHT 252 (345)
T ss_dssp C------TTSHHHHHHHHHHHHHTTSCSCEEESCTTCEECCEEHHHHHHHHHHHHTSS------SCCCEEECCS--CCEE
T ss_pred C------CcchhHHHHHHHHHHHcCCCCeeeeCCCCceeeeEEHHHHHHHHHHHHhCC------CCceEEEeCC--CCcc
Confidence 2 22111 1123334445543 335677888999999999999999988643 3479999998 8899
Q ss_pred HHHHHHHHhhhcccccC
Q psy6053 409 WQEIIDIGKSIVTTEVP 425 (614)
Q Consensus 409 ~~e~~~~~~~~~g~~~p 425 (614)
+.|+++.+.+.+|.+.+
T Consensus 253 ~~e~~~~i~~~~g~~~~ 269 (345)
T 2z1m_A 253 VREFVEKAAKIAGFDIE 269 (345)
T ss_dssp HHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHHHhCCCcc
Confidence 99999999999887643
No 40
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=99.97 E-value=5.3e-30 Score=268.18 Aligned_cols=307 Identities=15% Similarity=0.182 Sum_probs=196.4
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCCC
Q psy6053 102 GKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAEA 181 (614)
Q Consensus 102 ~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~~ 181 (614)
+|+|||||||||||++|+++|++.|++ |++++|+.........+.++ . ...+++++.+|+++
T Consensus 9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~---V~~~~r~~~~~~~~~~~~~~---------~------~~~~~~~~~~Dl~d 70 (338)
T 2rh8_A 9 KKTACVVGGTGFVASLLVKLLLQKGYA---VNTTVRDPDNQKKVSHLLEL---------Q------ELGDLKIFRADLTD 70 (338)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHTTCE---EEEEESCTTCTTTTHHHHHH---------G------GGSCEEEEECCTTT
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCCE---EEEEEcCcchhhhHHHHHhc---------C------CCCcEEEEecCCCC
Confidence 689999999999999999999999976 88889975432111112111 0 12468899999999
Q ss_pred CCCCCCHHHHHHHhccccEEEEcccccChh--HHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEeCcee-cc--CC---
Q psy6053 182 DELAIKESDRQLLASEVDIMIHGAATIRFD--EALKKAVLLNTRGTKMMLSLAKEMKHLELFVHISTAYC-HL--QE--- 253 (614)
Q Consensus 182 ~~lGLs~~~~~~l~~~vd~ViH~AA~v~~~--~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vST~~~-~~--~~--- 253 (614)
++ ++..+++++|+|||+||...+. .+.+..+++|+.||.+++++|++.+++++|||+||..+ ++ ..
T Consensus 71 ~~------~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~~~~ 144 (338)
T 2rh8_A 71 EL------SFEAPIAGCDFVFHVATPVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTG 144 (338)
T ss_dssp SS------SSHHHHTTCSEEEEESSCCCC---------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCSC
T ss_pred hH------HHHHHHcCCCEEEEeCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecCCcCCCC
Confidence 87 6788889999999999976543 22344789999999999999999534899999999853 21 11
Q ss_pred cccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCC-CchhhhHHHHHHHHHHHhh-CCCCEEEeecceeecccC
Q psy6053 254 KVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFP-NSYAYTKCLSEGLVVEAMN-NGMPCLMLRPSIIIPVWR 331 (614)
Q Consensus 254 ~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~p-n~Y~~SK~~aE~lv~~~~~-~glp~~IvRp~~I~g~~~ 331 (614)
.+++|+.+..+ ++ . .|. ..+ +.|+.||.++|+++.++.. .|++++++||+.|||+..
T Consensus 145 ~~~~E~~~~~~-~~--------------~---~~~---~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~ 203 (338)
T 2rh8_A 145 LVVDEKNWTDI-EF--------------L---TSA---KPPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGSSL 203 (338)
T ss_dssp CCCCTTTTTCC----------------------------CCCCCCTTSCCHHHHHHHHHHHHHTCCEEEEEECEEESCCS
T ss_pred cccChhhccch-hh--------------c---ccc---CCccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCC
Confidence 14556532111 00 0 000 001 2699999999999988765 599999999999999975
Q ss_pred CCCccccCCCCchHHHHHHHhcCceeeEeeC------CCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEeccCCcc
Q psy6053 332 EPLPGWTDNINGPTGLLIGAGKGVIRTMFCD------NTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLTSSQEW 405 (614)
Q Consensus 332 ~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~------~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~~~~~~ 405 (614)
.+. .......+.....|... ..+. +....++++|+|+|++++.++.... ..+.||++++
T Consensus 204 ~~~------~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~-----~~~~~~~~~~--- 268 (338)
T 2rh8_A 204 TSD------VPSSIGLAMSLITGNEF-LINGMKGMQMLSGSVSIAHVEDVCRAHIFVAEKES-----ASGRYICCAA--- 268 (338)
T ss_dssp SSS------CCHHHHHHHHHHHTCHH-HHHHHHHHHHHHSSEEEEEHHHHHHHHHHHHHCTT-----CCEEEEECSE---
T ss_pred CCC------CCchHHHHHHHHcCCcc-ccccccccccccCcccEEEHHHHHHHHHHHHcCCC-----cCCcEEEecC---
Confidence 431 11111112122233211 0111 1123489999999999999886532 3457888654
Q ss_pred cccHHHHHHHHhhhccc-ccCCCCccccCCcccccchhHHHHHHHHHhhhHHHHHHHHHHHhCCChHHHHHHHHHHHHHh
Q psy6053 406 QVSWQEIIDIGKSIVTT-EVPLNGCVWYPGGSMKSNRLLHQICVIFFHMIPAYFLDAIIFLSGNKPCLVKIQDRINKGFE 484 (614)
Q Consensus 406 ~it~~e~~~~~~~~~g~-~~p~~~~~~~p~~~~~~~~~~~~~~~~~~~~~pa~~~d~~~~~~G~~P~~~~l~~ki~~~~~ 484 (614)
.+|+.|+++.+.+..+. +.|.... ..+... .. ..-.+.+ +.+||+|+. .+.+.+.+
T Consensus 269 ~~s~~e~~~~l~~~~~~~~~~~~~~-~~~~~~----~~-------------~~d~~k~-~~lG~~p~~-~l~~gl~~--- 325 (338)
T 2rh8_A 269 NTSVPELAKFLSKRYPQYKVPTDFG-DFPPKS----KL-------------IISSEKL-VKEGFSFKY-GIEEIYDE--- 325 (338)
T ss_dssp EECHHHHHHHHHHHCTTSCCCCCCT-TSCSSC----SC-------------CCCCHHH-HHHTCCCSC-CHHHHHHH---
T ss_pred CCCHHHHHHHHHHhCCCCCCCCCCC-CCCcCc----ce-------------eechHHH-HHhCCCCCC-CHHHHHHH---
Confidence 58999999999987542 2222110 011000 00 0011233 568999987 78888877
Q ss_pred hhhhhhc
Q psy6053 485 VFEYYAN 491 (614)
Q Consensus 485 ~~~~f~~ 491 (614)
.++||..
T Consensus 326 ~~~~~~~ 332 (338)
T 2rh8_A 326 SVEYFKA 332 (338)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 4556643
No 41
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=99.97 E-value=2.3e-30 Score=270.44 Aligned_cols=244 Identities=17% Similarity=0.192 Sum_probs=189.4
Q ss_pred ccccccCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEE
Q psy6053 95 RIGETFTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLP 174 (614)
Q Consensus 95 ~i~~~~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~ 174 (614)
+-++.+++|+|||||||||||++|+++|++.|++ |++++|....... . .. ...++.+
T Consensus 13 ~~~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~---V~~~~r~~~~~~~------~-------------~~-~l~~v~~ 69 (330)
T 2pzm_A 13 GLVPRGSHMRILITGGAGCLGSNLIEHWLPQGHE---ILVIDNFATGKRE------V-------------LP-PVAGLSV 69 (330)
T ss_dssp -CCSTTTCCEEEEETTTSHHHHHHHHHHGGGTCE---EEEEECCSSSCGG------G-------------SC-SCTTEEE
T ss_pred CCcccCCCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEECCCccchh------h-------------hh-ccCCceE
Confidence 4456678899999999999999999999999865 8999996543210 0 00 2247899
Q ss_pred EeCCCCCCCCCCCHHHHHHHhc--cccEEEEcccccCh--hHHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEeCceec
Q psy6053 175 ISGDAEADELAIKESDRQLLAS--EVDIMIHGAATIRF--DEALKKAVLLNTRGTKMMLSLAKEMKHLELFVHISTAYCH 250 (614)
Q Consensus 175 v~gDl~~~~lGLs~~~~~~l~~--~vd~ViH~AA~v~~--~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vST~~~~ 250 (614)
+.+|+++++ ++..+++ ++|+|||+||.... ...+. +++|+.||.+++++|.+. ++++|||+||.+++
T Consensus 70 ~~~Dl~d~~------~~~~~~~~~~~D~vih~A~~~~~~~~~~~~--~~~N~~~~~~l~~a~~~~-~~~~iV~~SS~~~~ 140 (330)
T 2pzm_A 70 IEGSVTDAG------LLERAFDSFKPTHVVHSAAAYKDPDDWAED--AATNVQGSINVAKAASKA-GVKRLLNFQTALCY 140 (330)
T ss_dssp EECCTTCHH------HHHHHHHHHCCSEEEECCCCCSCTTCHHHH--HHHHTHHHHHHHHHHHHH-TCSEEEEEEEGGGG
T ss_pred EEeeCCCHH------HHHHHHhhcCCCEEEECCccCCCccccChh--HHHHHHHHHHHHHHHHHc-CCCEEEEecCHHHh
Confidence 999999865 7888888 99999999998754 23333 899999999999999984 78999999999887
Q ss_pred cCCc----ccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhhCCCCEEEeeccee
Q psy6053 251 LQEK----VLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMNNGMPCLMLRPSII 326 (614)
Q Consensus 251 ~~~~----~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~~glp~~IvRp~~I 326 (614)
+... +++|+. . ..+.|+.||+.+|++++.+ +++.+++||+++
T Consensus 141 ~~~~~~~~~~~E~~--~-----------------------------~~~~Y~~sK~~~e~~~~~~---~~~~~~iR~~~v 186 (330)
T 2pzm_A 141 GRPATVPIPIDSPT--A-----------------------------PFTSYGISKTAGEAFLMMS---DVPVVSLRLANV 186 (330)
T ss_dssp CSCSSSSBCTTCCC--C-----------------------------CCSHHHHHHHHHHHHHHTC---SSCEEEEEECEE
T ss_pred CCCccCCCCcCCCC--C-----------------------------CCChHHHHHHHHHHHHHHc---CCCEEEEeeeee
Confidence 6432 344432 1 1278999999999999887 799999999999
Q ss_pred ecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHH-HHHHHHHhhhhcCCCCccEEEeccCCcc
Q psy6053 327 IPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITIN-GIFVAIWAYLSQKEHRQSIVHLTSSQEW 405 (614)
Q Consensus 327 ~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~-aii~~~~~~~~~~~~~~~vyni~~~~~~ 405 (614)
||+... . .....++..+..|. ..++++. ..++++++|+|+ +++.++... . +++||++++ .
T Consensus 187 ~gp~~~-------~-~~~~~~~~~~~~~~--~~~~~~~-~~~~i~~~Dva~~a~~~~~~~~-----~-g~~~~v~~~--~ 247 (330)
T 2pzm_A 187 TGPRLA-------I-GPIPTFYKRLKAGQ--KCFCSDT-VRDFLDMSDFLAIADLSLQEGR-----P-TGVFNVSTG--E 247 (330)
T ss_dssp ECTTCC-------S-SHHHHHHHHHHTTC--CCCEESC-EECEEEHHHHHHHHHHHTSTTC-----C-CEEEEESCS--C
T ss_pred ECcCCC-------C-CHHHHHHHHHHcCC--EEeCCCC-EecceeHHHHHHHHHHHHhhcC-----C-CCEEEeCCC--C
Confidence 998631 0 11223444455554 3456666 889999999999 998887542 2 789999998 8
Q ss_pred cccHHHHHHHHhhhcccc
Q psy6053 406 QVSWQEIIDIGKSIVTTE 423 (614)
Q Consensus 406 ~it~~e~~~~~~~~~g~~ 423 (614)
++++.|+++.+.+.+|.+
T Consensus 248 ~~s~~e~~~~i~~~~g~~ 265 (330)
T 2pzm_A 248 GHSIKEVFDVVLDYVGAT 265 (330)
T ss_dssp CEEHHHHHHHHHHHHTCC
T ss_pred CCCHHHHHHHHHHHhCCC
Confidence 899999999999998886
No 42
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=99.97 E-value=6.4e-30 Score=261.16 Aligned_cols=274 Identities=14% Similarity=0.043 Sum_probs=196.7
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCCC
Q psy6053 102 GKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAEA 181 (614)
Q Consensus 102 ~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~~ 181 (614)
.|+|||||| ||+|++|+++|+++|++ |++++|+.... +.+ ...+++++.+|+++
T Consensus 5 ~~~ilVtGa-G~iG~~l~~~L~~~g~~---V~~~~r~~~~~---~~~-------------------~~~~~~~~~~D~~d 58 (286)
T 3ius_A 5 TGTLLSFGH-GYTARVLSRALAPQGWR---IIGTSRNPDQM---EAI-------------------RASGAEPLLWPGEE 58 (286)
T ss_dssp CCEEEEETC-CHHHHHHHHHHGGGTCE---EEEEESCGGGH---HHH-------------------HHTTEEEEESSSSC
T ss_pred cCcEEEECC-cHHHHHHHHHHHHCCCE---EEEEEcChhhh---hhH-------------------hhCCCeEEEecccc
Confidence 478999998 99999999999999876 99999975431 111 12468999999998
Q ss_pred CCCCCCHHHHHHHhccccEEEEcccccChhHHHHHHHHHhHHHHHHHHHHHHHc-CCCceEEEEeCceeccCCc--cccc
Q psy6053 182 DELAIKESDRQLLASEVDIMIHGAATIRFDEALKKAVLLNTRGTKMMLSLAKEM-KHLELFVHISTAYCHLQEK--VLYE 258 (614)
Q Consensus 182 ~~lGLs~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~-~~~k~~V~vST~~~~~~~~--~i~E 258 (614)
.+ ++++|+|||+||......+ .+.+++++|++. .++++|||+||.++++... +++|
T Consensus 59 ~~-----------~~~~d~vi~~a~~~~~~~~----------~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E 117 (286)
T 3ius_A 59 PS-----------LDGVTHLLISTAPDSGGDP----------VLAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDE 117 (286)
T ss_dssp CC-----------CTTCCEEEECCCCBTTBCH----------HHHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTCEECT
T ss_pred cc-----------cCCCCEEEECCCccccccH----------HHHHHHHHHHhhcCCceEEEEeecceecCCCCCCCcCC
Confidence 32 5789999999998765432 257889999884 3789999999998876543 5677
Q ss_pred ccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhhCCCCEEEeecceeecccCCCCcccc
Q psy6053 259 KPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMNNGMPCLMLRPSIIIPVWREPLPGWT 338 (614)
Q Consensus 259 ~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~~glp~~IvRp~~I~g~~~~p~~gw~ 338 (614)
+..+.|. +.|+.||+.+|+++.++ . +++++|+||+.|||+...++.
T Consensus 118 ~~~~~p~-----------------------------~~Y~~sK~~~E~~~~~~-~-~~~~~ilRp~~v~G~~~~~~~--- 163 (286)
T 3ius_A 118 TTPLTPT-----------------------------AARGRWRVMAEQQWQAV-P-NLPLHVFRLAGIYGPGRGPFS--- 163 (286)
T ss_dssp TSCCCCC-----------------------------SHHHHHHHHHHHHHHHS-T-TCCEEEEEECEEEBTTBSSST---
T ss_pred CCCCCCC-----------------------------CHHHHHHHHHHHHHHhh-c-CCCEEEEeccceECCCchHHH---
Confidence 6443332 78999999999999998 4 899999999999999764421
Q ss_pred CCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEeccCCcccccHHHHHHHHhh
Q psy6053 339 DNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLTSSQEWQVSWQEIIDIGKS 418 (614)
Q Consensus 339 d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~~~~~~~it~~e~~~~~~~ 418 (614)
.+..|....+.+ ++..+++++++|+|++++.++.+.. .+++||++++ +++|+.|+++.+.+
T Consensus 164 -----------~~~~~~~~~~~~-~~~~~~~i~v~Dva~a~~~~~~~~~-----~g~~~~i~~~--~~~s~~e~~~~i~~ 224 (286)
T 3ius_A 164 -----------KLGKGGIRRIIK-PGQVFSRIHVEDIAQVLAASMARPD-----PGAVYNVCDD--EPVPPQDVIAYAAE 224 (286)
T ss_dssp -----------TSSSSCCCEEEC-TTCCBCEEEHHHHHHHHHHHHHSCC-----TTCEEEECCS--CCBCHHHHHHHHHH
T ss_pred -----------HHhcCCccccCC-CCcccceEEHHHHHHHHHHHHhCCC-----CCCEEEEeCC--CCccHHHHHHHHHH
Confidence 123454444444 4688999999999999999987654 5679999999 88999999999999
Q ss_pred hcccccCCCCccccCCcccccchhHHHHHHHHHhhhHHHHHHHHHHHhCCChHHHHHHHHHHHHH
Q psy6053 419 IVTTEVPLNGCVWYPGGSMKSNRLLHQICVIFFHMIPAYFLDAIIFLSGNKPCLVKIQDRINKGF 483 (614)
Q Consensus 419 ~~g~~~p~~~~~~~p~~~~~~~~~~~~~~~~~~~~~pa~~~d~~~~~~G~~P~~~~l~~ki~~~~ 483 (614)
.+|.+.|...+.+.+.. ...... ++..-...-.+.+.+.+||+|+...+.+.+.+..
T Consensus 225 ~~g~~~~~~~~~~~~~~----~~~~~~----~~~~~~~~d~~k~~~~lG~~p~~p~~~e~l~~~~ 281 (286)
T 3ius_A 225 LQGLPLPPAVDFDKADL----TPMARS----FYSENKRVRNDRIKEELGVRLKYPNYRVGLEALQ 281 (286)
T ss_dssp HHTCCCCCEEEGGGSCC----CHHHHH----TTSCCCEECCHHHHHTTCCCCSCSSHHHHHHHHH
T ss_pred HcCCCCCcccchhhhcc----ChhHHH----hhcCCceeehHHHHHHhCCCCCcCCHHHHHHHHH
Confidence 98987654321111100 000000 0000000113445677899998655666766643
No 43
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=99.97 E-value=6.2e-30 Score=264.97 Aligned_cols=289 Identities=15% Similarity=0.072 Sum_probs=181.9
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCCC
Q psy6053 102 GKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAEA 181 (614)
Q Consensus 102 ~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~~ 181 (614)
+|+|||||||||||++|+++|+++|++ |++++|+... .+ ++.+|+++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~---V~~~~r~~~~----------------------------~~--~~~~Dl~d 48 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNNWH---AVGCGFRRAR----------------------------PK--FEQVNLLD 48 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTTCE---EEEEC---------------------------------------------
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCCe---EEEEccCCCC----------------------------CC--eEEecCCC
Confidence 589999999999999999999999865 8999986421 12 57799998
Q ss_pred CCCCCCHHHHHHHhcc--ccEEEEcccccChh---HHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEeCceeccCC-cc
Q psy6053 182 DELAIKESDRQLLASE--VDIMIHGAATIRFD---EALKKAVLLNTRGTKMMLSLAKEMKHLELFVHISTAYCHLQE-KV 255 (614)
Q Consensus 182 ~~lGLs~~~~~~l~~~--vd~ViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vST~~~~~~~-~~ 255 (614)
++ ++..++++ +|+|||+||..... .+....+++|+.||.+++++|.+. +. +|||+||.++++.. .+
T Consensus 49 ~~------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~-~~v~~SS~~v~~~~~~~ 120 (315)
T 2ydy_A 49 SN------AVHHIIHDFQPHVIVHCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAV-GA-FLIYISSDYVFDGTNPP 120 (315)
T ss_dssp ---------CHHHHHHHCCSEEEECC-------------------CHHHHHHHHHHHHH-TC-EEEEEEEGGGSCSSSCS
T ss_pred HH------HHHHHHHhhCCCEEEECCcccChhhhhcCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEchHHHcCCCCCC
Confidence 76 67777764 89999999976542 455678899999999999999995 55 99999999887652 25
Q ss_pred cccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhhCCCCEEEeecceeecccCCCCc
Q psy6053 256 LYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMNNGMPCLMLRPSIIIPVWREPLP 335 (614)
Q Consensus 256 i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~~glp~~IvRp~~I~g~~~~p~~ 335 (614)
++|+..+.| .+.|+.||+.+|++++.+ +++++++||+.|||+...+..
T Consensus 121 ~~E~~~~~~-----------------------------~~~Y~~sK~~~e~~~~~~---~~~~~~lR~~~v~G~~~~~~~ 168 (315)
T 2ydy_A 121 YREEDIPAP-----------------------------LNLYGKTKLDGEKAVLEN---NLGAAVLRIPILYGEVEKLEE 168 (315)
T ss_dssp BCTTSCCCC-----------------------------CSHHHHHHHHHHHHHHHH---CTTCEEEEECSEECSCSSGGG
T ss_pred CCCCCCCCC-----------------------------cCHHHHHHHHHHHHHHHh---CCCeEEEeeeeeeCCCCcccc
Confidence 566533322 278999999999999988 678899999999998765321
Q ss_pred cccCCCCchHHHHHHHh-cCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEeccCCcccccHHHHHH
Q psy6053 336 GWTDNINGPTGLLIGAG-KGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLTSSQEWQVSWQEIID 414 (614)
Q Consensus 336 gw~d~~~g~~~~~~~~~-~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~~~~~~~it~~e~~~ 414 (614)
++.. .++..+. .|....+ .++...++++++|+|++++.++.+.... ...+++||++++ +++|+.|+++
T Consensus 169 ~~~~------~~~~~~~~~~~~~~~--~~~~~~~~i~v~Dva~a~~~~~~~~~~~-~~~~~~~~i~~~--~~~s~~e~~~ 237 (315)
T 2ydy_A 169 SAVT------VMFDKVQFSNKSANM--DHWQQRFPTHVKDVATVCRQLAEKRMLD-PSIKGTFHWSGN--EQMTKYEMAC 237 (315)
T ss_dssp STTG------GGHHHHHCCSSCEEE--ECSSBBCCEEHHHHHHHHHHHHHHHHTC-TTCCEEEECCCS--CCBCHHHHHH
T ss_pred cHHH------HHHHHHHhcCCCeee--ccCceECcEEHHHHHHHHHHHHHhhccc-cCCCCeEEEcCC--CcccHHHHHH
Confidence 2111 1333334 4543333 3467889999999999999988764100 125789999998 8899999999
Q ss_pred HHhhhcccccCCCCccc-cCC-cccccchhHHHHHHHHHhhhHHHHHHHHHHHhCCChHHHHHHHHHHHHHhhhhhhhcc
Q psy6053 415 IGKSIVTTEVPLNGCVW-YPG-GSMKSNRLLHQICVIFFHMIPAYFLDAIIFLSGNKPCLVKIQDRINKGFEVFEYYANN 492 (614)
Q Consensus 415 ~~~~~~g~~~p~~~~~~-~p~-~~~~~~~~~~~~~~~~~~~~pa~~~d~~~~~~G~~P~~~~l~~ki~~~~~~~~~f~~~ 492 (614)
.+.+.+|.+.+...+.. .|. ....... ...-.+.+.++ ||+|... +.+.+.+ .++||..+
T Consensus 238 ~i~~~~g~~~~~~~~~~~~~~~~~~~~~~-------------~~~d~~k~~~~-G~~p~~~-~~~~l~~---~~~~~~~~ 299 (315)
T 2ydy_A 238 AIADAFNLPSSHLRPITDSPVLGAQRPRN-------------AQLDCSKLETL-GIGQRTP-FRIGIKE---SLWPFLID 299 (315)
T ss_dssp HHHHHTTCCCTTEEEECSCCCSSSCCCSB-------------CCBCCHHHHHT-TCCCCCC-HHHHHHH---HHGGGCC-
T ss_pred HHHHHhCCChhheeccccccccccCCCcc-------------cccchHHHHhc-CCCCCCC-HHHHHHH---HHHHHccc
Confidence 99999887644111111 111 0000000 00112344556 9998873 7778776 55666544
No 44
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=99.97 E-value=2.6e-29 Score=258.20 Aligned_cols=231 Identities=19% Similarity=0.189 Sum_probs=180.7
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCCCC
Q psy6053 103 KTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAEAD 182 (614)
Q Consensus 103 ~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~~~ 182 (614)
|+|||||||||+|++|+++|+ +|++ |++++|... .+.+|++++
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~g~~---V~~~~r~~~---------------------------------~~~~D~~d~ 43 (299)
T 1n2s_A 1 MNILLFGKTGQVGWELQRSLA-PVGN---LIALDVHSK---------------------------------EFCGDFSNP 43 (299)
T ss_dssp CEEEEECTTSHHHHHHHHHTT-TTSE---EEEECTTCS---------------------------------SSCCCTTCH
T ss_pred CeEEEECCCCHHHHHHHHHhh-cCCe---EEEeccccc---------------------------------cccccCCCH
Confidence 579999999999999999999 7765 899998641 246899876
Q ss_pred CCCCCHHHHHHHhcc--ccEEEEcccccChh---HHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEeCceeccCCc--c
Q psy6053 183 ELAIKESDRQLLASE--VDIMIHGAATIRFD---EALKKAVLLNTRGTKMMLSLAKEMKHLELFVHISTAYCHLQEK--V 255 (614)
Q Consensus 183 ~lGLs~~~~~~l~~~--vd~ViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vST~~~~~~~~--~ 255 (614)
+ ++.+++++ +|+|||+||..... ......+++|+.||.+++++|++. ++ +|||+||.++++... +
T Consensus 44 ~------~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~-~~v~~SS~~vy~~~~~~~ 115 (299)
T 1n2s_A 44 K------GVAETVRKLRPDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANET-GA-WVVHYSTDYVFPGTGDIP 115 (299)
T ss_dssp H------HHHHHHHHHCCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTT-TC-EEEEEEEGGGSCCCTTCC
T ss_pred H------HHHHHHHhcCCCEEEECcccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHc-CC-cEEEEecccEEeCCCCCC
Confidence 5 78888876 99999999987643 345678899999999999999985 66 799999998776543 5
Q ss_pred cccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhhCCCCEEEeecceeecccCCCCc
Q psy6053 256 LYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMNNGMPCLMLRPSIIIPVWREPLP 335 (614)
Q Consensus 256 i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~~glp~~IvRp~~I~g~~~~p~~ 335 (614)
++|+..+.| .+.|+.||+.+|++++.+ +.+++++||+.|||+...
T Consensus 116 ~~E~~~~~p-----------------------------~~~Y~~sK~~~E~~~~~~---~~~~~ilRp~~v~G~~~~--- 160 (299)
T 1n2s_A 116 WQETDATSP-----------------------------LNVYGKTKLAGEKALQDN---CPKHLIFRTSWVYAGKGN--- 160 (299)
T ss_dssp BCTTSCCCC-----------------------------SSHHHHHHHHHHHHHHHH---CSSEEEEEECSEECSSSC---
T ss_pred CCCCCCCCC-----------------------------ccHHHHHHHHHHHHHHHh---CCCeEEEeeeeecCCCcC---
Confidence 566533222 278999999999999988 449999999999998642
Q ss_pred cccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEeccCCcccccHHHHHHH
Q psy6053 336 GWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLTSSQEWQVSWQEIIDI 415 (614)
Q Consensus 336 gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~~~~~~~it~~e~~~~ 415 (614)
.....++..+..|......+ +...++++++|+|++++.++.+.... ...+++||++++ +++|+.|+++.
T Consensus 161 ------~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~Dva~~~~~~~~~~~~~-~~~~~~~~i~~~--~~~s~~e~~~~ 229 (299)
T 1n2s_A 161 ------NFAKTMLRLAKERQTLSVIN--DQYGAPTGAELLADCTAHAIRVALNK-PEVAGLYHLVAG--GTTTWHDYAAL 229 (299)
T ss_dssp ------CHHHHHHHHHHHCSEEEEEC--SCEECCEEHHHHHHHHHHHHHHHHHC-GGGCEEEECCCB--SCEEHHHHHHH
T ss_pred ------cHHHHHHHHHhcCCCEEeec--CcccCCeeHHHHHHHHHHHHHHhccc-cccCceEEEeCC--CCCCHHHHHHH
Confidence 11223444555565444444 47899999999999999998875310 003689999998 88999999999
Q ss_pred Hhhhccccc
Q psy6053 416 GKSIVTTEV 424 (614)
Q Consensus 416 ~~~~~g~~~ 424 (614)
+.+.+|.+.
T Consensus 230 i~~~~g~~~ 238 (299)
T 1n2s_A 230 VFDEARKAG 238 (299)
T ss_dssp HHHHHHHHT
T ss_pred HHHHhCCCc
Confidence 999988763
No 45
>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*
Probab=99.97 E-value=4.8e-29 Score=258.41 Aligned_cols=290 Identities=17% Similarity=0.100 Sum_probs=204.6
Q ss_pred EEEEecccccccHHHHHHHHhh--CCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCCC
Q psy6053 104 TLFMTGASGFLGKVLLEKILRK--SPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAEA 181 (614)
Q Consensus 104 ~VLITGaTGFlG~~Ll~~Ll~~--g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~~ 181 (614)
+|||||||||||++|+++|++. |++ |+++.|..... .++.++.+|+++
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~~~g~~---V~~~~r~~~~~---------------------------~~~~~~~~D~~d 50 (317)
T 3ajr_A 1 MILVTGSSGQIGTELVPYLAEKYGKKN---VIASDIVQRDT---------------------------GGIKFITLDVSN 50 (317)
T ss_dssp CEEEESTTSTTHHHHHHHHHHHHCGGG---EEEEESSCCCC---------------------------TTCCEEECCTTC
T ss_pred CEEEEcCCcHHHHHHHHHHHHhcCCCE---EEEecCCCccc---------------------------cCceEEEecCCC
Confidence 4899999999999999999998 666 88998875431 135678999998
Q ss_pred CCCCCCHHHHHHHhc--cccEEEEcccccCh--hHHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEeCceeccCCc---
Q psy6053 182 DELAIKESDRQLLAS--EVDIMIHGAATIRF--DEALKKAVLLNTRGTKMMLSLAKEMKHLELFVHISTAYCHLQEK--- 254 (614)
Q Consensus 182 ~~lGLs~~~~~~l~~--~vd~ViH~AA~v~~--~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vST~~~~~~~~--- 254 (614)
++ ++..+++ ++|+|||+||.... .......+++|+.||.+++++|++. ++++|||+||.++++...
T Consensus 51 ~~------~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~v~~SS~~~~~~~~~~~ 123 (317)
T 3ajr_A 51 RD------EIDRAVEKYSIDAIFHLAGILSAKGEKDPALAYKVNMNGTYNILEAAKQH-RVEKVVIPSTIGVFGPETPKN 123 (317)
T ss_dssp HH------HHHHHHHHTTCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEEEEGGGCCTTSCSS
T ss_pred HH------HHHHHHhhcCCcEEEECCcccCCccccChHHHhhhhhHHHHHHHHHHHHc-CCCEEEEecCHHHhCCCCCCC
Confidence 65 7888887 89999999997643 2345678899999999999999994 889999999998876532
Q ss_pred ccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh-CCCCEEEeecceeecccCCC
Q psy6053 255 VLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN-NGMPCLMLRPSIIIPVWREP 333 (614)
Q Consensus 255 ~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~-~glp~~IvRp~~I~g~~~~p 333 (614)
+.+|+..+.| .+.|+.||+.+|+++..+.. .|++++++||+.+||+...|
T Consensus 124 ~~~e~~~~~p-----------------------------~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~~~g~~~~~ 174 (317)
T 3ajr_A 124 KVPSITITRP-----------------------------RTMFGVTKIAAELLGQYYYEKFGLDVRSLRYPGIISYKAEP 174 (317)
T ss_dssp SBCSSSCCCC-----------------------------CSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSSSCC
T ss_pred CccccccCCC-----------------------------CchHHHHHHHHHHHHHHHHHhcCCeEEEEecCcEeccCCCC
Confidence 3444432222 27899999999999988765 68999999999999987654
Q ss_pred CccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEeccCCcccccHHHHH
Q psy6053 334 LPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLTSSQEWQVSWQEII 413 (614)
Q Consensus 334 ~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~~~~~~~it~~e~~ 413 (614)
..++. ......+.....+.....+++++..+++++|+|+|++++.++.++... ...+++||+++ .++|+.|++
T Consensus 175 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~-~~~g~~~~i~~---~~~s~~e~~ 247 (317)
T 3ajr_A 175 TAGTT---DYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKALVDLYEADRDK-LVLRNGYNVTA---YTFTPSELY 247 (317)
T ss_dssp CSCSS---THHHHHHHHHHTTCCEEECSCTTCCEEEEEHHHHHHHHHHHHHCCGGG-CSSCSCEECCS---EEECHHHHH
T ss_pred CCcch---hHHHHHHHHHHhCCCceeecCccceeeeeEHHHHHHHHHHHHhCCccc-cccCceEecCC---ccccHHHHH
Confidence 32211 112233333333333344567888999999999999999988765320 01247999985 369999999
Q ss_pred HHHhhhcccccCCCCccccCCcccccchhHHHHHHHHHhhhH-HHHHHHHHHHhCCChHHHHHHHHHHHH
Q psy6053 414 DIGKSIVTTEVPLNGCVWYPGGSMKSNRLLHQICVIFFHMIP-AYFLDAIIFLSGNKPCLVKIQDRINKG 482 (614)
Q Consensus 414 ~~~~~~~g~~~p~~~~~~~p~~~~~~~~~~~~~~~~~~~~~p-a~~~d~~~~~~G~~P~~~~l~~ki~~~ 482 (614)
+.+.+.+|. .++ .+.|. .... +....+ ..-.+.+.+.+||+|.. .+.+.+.+.
T Consensus 248 ~~i~~~~~~-~~i---~~~~~-------~~~~----~~~~~~~~~d~~k~~~~lG~~p~~-~~~~~l~~~ 301 (317)
T 3ajr_A 248 SKIKERIPE-FEI---EYKED-------FRDK----IAATWPESLDSSEASNEWGFSIEY-DLDRTIDDM 301 (317)
T ss_dssp HHHHTTCCS-CCE---EECCC-------HHHH----HHTTSCSCBCCHHHHHHHCCCCCC-CHHHHHHHH
T ss_pred HHHHHHCCc-ccc---ccccc-------cchh----hccccccccCHHHHHHHcCCCCCC-CHHHHHHHH
Confidence 999998662 111 11221 0000 000011 01124456778999986 667777763
No 46
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=99.97 E-value=6.2e-29 Score=264.08 Aligned_cols=262 Identities=15% Similarity=0.066 Sum_probs=193.9
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCCCC
Q psy6053 103 KTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAEAD 182 (614)
Q Consensus 103 ~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~~~ 182 (614)
|+|||||||||||++|+++|++.|++ |++++|...... .++++++.. ... .. ...+++++.+|++++
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~~g~~---V~~~~r~~~~~~-~~~~~~l~~-----~~~---~~-~~~~~~~~~~Dl~d~ 91 (375)
T 1t2a_A 25 NVALITGITGQDGSYLAEFLLEKGYE---VHGIVRRSSSFN-TGRIEHLYK-----NPQ---AH-IEGNMKLHYGDLTDS 91 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCE---EEEEECCCSSCC-CTTTGGGC------------------CEEEEECCTTCH
T ss_pred cEEEEECCCchHHHHHHHHHHHCCCE---EEEEECCccccc-hhhHHHHhh-----hhc---cc-cCCCceEEEccCCCH
Confidence 68999999999999999999999865 899999764311 011111000 000 00 014688999999986
Q ss_pred CCCCCHHHHHHHhcc--ccEEEEcccccChh---HHHHHHHHHhHHHHHHHHHHHHHcCCC---ceEEEEeCceeccCCc
Q psy6053 183 ELAIKESDRQLLASE--VDIMIHGAATIRFD---EALKKAVLLNTRGTKMMLSLAKEMKHL---ELFVHISTAYCHLQEK 254 (614)
Q Consensus 183 ~lGLs~~~~~~l~~~--vd~ViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~la~~~~~~---k~~V~vST~~~~~~~~ 254 (614)
+ ++..++++ +|+|||+||..... +.....+++|+.||.+++++|.+. ++ ++|||+||.++++...
T Consensus 92 ~------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~-~~~~~~~iv~~SS~~~~~~~~ 164 (375)
T 1t2a_A 92 T------CLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTC-GLINSVKFYQASTSELYGKVQ 164 (375)
T ss_dssp H------HHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHT-TCTTTCEEEEEEEGGGTCSCS
T ss_pred H------HHHHHHHhcCCCEEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHh-CCCccceEEEecchhhhCCCC
Confidence 5 78888875 69999999987653 345678899999999999999994 66 7999999998876433
Q ss_pred --ccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh-CCCCEEEeecceeecccC
Q psy6053 255 --VLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN-NGMPCLMLRPSIIIPVWR 331 (614)
Q Consensus 255 --~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~-~glp~~IvRp~~I~g~~~ 331 (614)
+++|+..+.| .+.|+.||+.+|++++.+.. .+++++++||+.+||+..
T Consensus 165 ~~~~~E~~~~~~-----------------------------~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~~~gp~~ 215 (375)
T 1t2a_A 165 EIPQKETTPFYP-----------------------------RSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRR 215 (375)
T ss_dssp SSSBCTTSCCCC-----------------------------CSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTS
T ss_pred CCCCCccCCCCC-----------------------------CChhHHHHHHHHHHHHHHHHHhCCCEEEEecccccCCCC
Confidence 5566533222 26899999999999998876 589999999999999864
Q ss_pred CCCccccCCCCchHHHHHHHhcCce-eeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEeccCCcccccHH
Q psy6053 332 EPLPGWTDNINGPTGLLIGAGKGVI-RTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLTSSQEWQVSWQ 410 (614)
Q Consensus 332 ~p~~gw~d~~~g~~~~~~~~~~g~~-~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~~~~~~~it~~ 410 (614)
.+ ++... ....++..+..|.. ...+++++..+++++|+|+|++++.++.+. ..++||++++ +++|+.
T Consensus 216 ~~--~~~~~--~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a~~~~~~~~------~~~~~ni~~~--~~~s~~ 283 (375)
T 1t2a_A 216 GA--NFVTR--KISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQND------EPEDFVIATG--EVHSVR 283 (375)
T ss_dssp CT--TSHHH--HHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHHHHHHHHHSS------SCCCEEECCS--CCEEHH
T ss_pred CC--CcchH--HHHHHHHHHHcCCCceeEeCCCCceeeeEEHHHHHHHHHHHHhcC------CCceEEEeCC--CcccHH
Confidence 32 11100 01233444455643 245678899999999999999999988653 2479999998 889999
Q ss_pred HHHHHHhhhcccccC
Q psy6053 411 EIIDIGKSIVTTEVP 425 (614)
Q Consensus 411 e~~~~~~~~~g~~~p 425 (614)
|+++.+.+.+|.+.+
T Consensus 284 e~~~~i~~~~g~~~~ 298 (375)
T 1t2a_A 284 EFVEKSFLHIGKTIV 298 (375)
T ss_dssp HHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHhCCCcc
Confidence 999999999887643
No 47
>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1
Probab=99.97 E-value=2.1e-29 Score=287.50 Aligned_cols=268 Identities=13% Similarity=0.110 Sum_probs=198.9
Q ss_pred ccCCcEEEEecccccccHHHHHHHHhh-CCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeC
Q psy6053 99 TFTGKTLFMTGASGFLGKVLLEKILRK-SPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISG 177 (614)
Q Consensus 99 ~~~~~~VLITGaTGFlG~~Ll~~Ll~~-g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~g 177 (614)
..++|+|||||||||||++|+++|++. |++ |++++|+..... + +. ...+++++.|
T Consensus 312 ~~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~---V~~~~r~~~~~~---~------------~~------~~~~v~~v~~ 367 (660)
T 1z7e_A 312 ARRRTRVLILGVNGFIGNHLTERLLREDHYE---VYGLDIGSDAIS---R------------FL------NHPHFHFVEG 367 (660)
T ss_dssp --CCEEEEEETTTSHHHHHHHHHHHHSSSEE---EEEEESCCTTTG---G------------GT------TCTTEEEEEC
T ss_pred hccCceEEEEcCCcHHHHHHHHHHHhcCCCE---EEEEEcCchhhh---h------------hc------cCCceEEEEC
Confidence 356899999999999999999999998 654 999999764321 0 00 1247899999
Q ss_pred CCCCCCCCCCHHHHHHHhccccEEEEcccccCh---hHHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEeCceeccCCc
Q psy6053 178 DAEADELAIKESDRQLLASEVDIMIHGAATIRF---DEALKKAVLLNTRGTKMMLSLAKEMKHLELFVHISTAYCHLQEK 254 (614)
Q Consensus 178 Dl~~~~lGLs~~~~~~l~~~vd~ViH~AA~v~~---~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vST~~~~~~~~ 254 (614)
|++++. +.++.+++++|+|||+||.... ..+....+++|+.||.+++++|++. + ++|||+||.++++...
T Consensus 368 Dl~d~~-----~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~-~-~r~V~~SS~~vyg~~~ 440 (660)
T 1z7e_A 368 DISIHS-----EWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKY-R-KRIIFPSTSEVYGMCS 440 (660)
T ss_dssp CTTTCH-----HHHHHHHHHCSEEEECCCCCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHT-T-CEEEEECCGGGGBTCC
T ss_pred CCCCcH-----HHHHHhhcCCCEEEECceecCccccccCHHHHHHhhhHHHHHHHHHHHHh-C-CEEEEEecHHHcCCCC
Confidence 999864 2367778899999999998763 3456678899999999999999995 6 8999999998776532
Q ss_pred --ccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh-CCCCEEEeecceeecccC
Q psy6053 255 --VLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN-NGMPCLMLRPSIIIPVWR 331 (614)
Q Consensus 255 --~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~-~glp~~IvRp~~I~g~~~ 331 (614)
+++|+....+..+ .....+.|+.||+.+|++++.+.. .|++++++||+.|||+..
T Consensus 441 ~~~~~E~~~~~~~~p----------------------~~~p~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRpg~v~Gp~~ 498 (660)
T 1z7e_A 441 DKYFDEDHSNLIVGP----------------------VNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRL 498 (660)
T ss_dssp SSSBCTTTCCEEECC----------------------TTCTTHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEESTTS
T ss_pred CcccCCCccccccCc----------------------ccCCCCCcHHHHHHHHHHHHHHHHHcCCCEEEECCCcccCCCc
Confidence 4555532100000 001125799999999999988765 599999999999999976
Q ss_pred CCCccccCCCC-chHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEeccCCcc-cccH
Q psy6053 332 EPLPGWTDNIN-GPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLTSSQEW-QVSW 409 (614)
Q Consensus 332 ~p~~gw~d~~~-g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~~~~~~-~it~ 409 (614)
.+..++.-+.. ....++..+..|....++++++..+++++|+|+|++++.++..... ...+++||++++ + ++|+
T Consensus 499 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~--~~~g~~~ni~~~--~~~~s~ 574 (660)
T 1z7e_A 499 DNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGN--RCDGEIINIGNP--ENEASI 574 (660)
T ss_dssp SCHHHHTTTCSCHHHHHHHHHHHTCCEEEEGGGCCEEECEEHHHHHHHHHHHHHCGGG--TTTTEEEEECCG--GGEEEH
T ss_pred cccccccccccchHHHHHHHHHcCCCcEEeCCCCeEEEEEEHHHHHHHHHHHHhCccc--cCCCeEEEECCC--CCCcCH
Confidence 43211110111 1234556666776666677888999999999999999999876531 015689999987 6 7999
Q ss_pred HHHHHHHhhhcccc
Q psy6053 410 QEIIDIGKSIVTTE 423 (614)
Q Consensus 410 ~e~~~~~~~~~g~~ 423 (614)
.|+++.+.+.+|.+
T Consensus 575 ~el~~~i~~~~g~~ 588 (660)
T 1z7e_A 575 EELGEMLLASFEKH 588 (660)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhcCC
Confidence 99999999988865
No 48
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=99.97 E-value=4.1e-29 Score=255.33 Aligned_cols=224 Identities=21% Similarity=0.182 Sum_probs=180.3
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCCCC
Q psy6053 103 KTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAEAD 182 (614)
Q Consensus 103 ~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~~~ 182 (614)
|+|||||||||||++++++|+++|++ |++++|. .+|++++
T Consensus 6 m~ilVtGatG~iG~~l~~~L~~~g~~---V~~~~r~-------------------------------------~~D~~d~ 45 (287)
T 3sc6_A 6 ERVIITGANGQLGKQLQEELNPEEYD---IYPFDKK-------------------------------------LLDITNI 45 (287)
T ss_dssp EEEEEESTTSHHHHHHHHHSCTTTEE---EEEECTT-------------------------------------TSCTTCH
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCCE---EEEeccc-------------------------------------ccCCCCH
Confidence 48999999999999999999999865 8999982 2677775
Q ss_pred CCCCCHHHHHHHhc--cccEEEEcccccChhH---HHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEeCceeccCC--cc
Q psy6053 183 ELAIKESDRQLLAS--EVDIMIHGAATIRFDE---ALKKAVLLNTRGTKMMLSLAKEMKHLELFVHISTAYCHLQE--KV 255 (614)
Q Consensus 183 ~lGLs~~~~~~l~~--~vd~ViH~AA~v~~~~---~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vST~~~~~~~--~~ 255 (614)
+ .+..+++ ++|+|||+||...... .....+++|+.||.+++++|++. ++ +|||+||.++++.. .+
T Consensus 46 ~------~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~-~~v~~SS~~vy~~~~~~~ 117 (287)
T 3sc6_A 46 S------QVQQVVQEIRPHIIIHCAAYTKVDQAEKERDLAYVINAIGARNVAVASQLV-GA-KLVYISTDYVFQGDRPEG 117 (287)
T ss_dssp H------HHHHHHHHHCCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHH-TC-EEEEEEEGGGSCCCCSSC
T ss_pred H------HHHHHHHhcCCCEEEECCcccChHHHhcCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEchhhhcCCCCCCC
Confidence 4 7888877 6999999999887543 56778999999999999999995 66 69999999877654 36
Q ss_pred cccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhhCCCCEEEeecceeecccCCCCc
Q psy6053 256 LYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMNNGMPCLMLRPSIIIPVWREPLP 335 (614)
Q Consensus 256 i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~~glp~~IvRp~~I~g~~~~p~~ 335 (614)
++|+..+.|. +.|+.||+.+|++++.+ +.+++++||+.|||+....
T Consensus 118 ~~E~~~~~p~-----------------------------~~Y~~sK~~~E~~~~~~---~~~~~ilR~~~v~G~~~~~-- 163 (287)
T 3sc6_A 118 YDEFHNPAPI-----------------------------NIYGASKYAGEQFVKEL---HNKYFIVRTSWLYGKYGNN-- 163 (287)
T ss_dssp BCTTSCCCCC-----------------------------SHHHHHHHHHHHHHHHH---CSSEEEEEECSEECSSSCC--
T ss_pred CCCCCCCCCC-----------------------------CHHHHHHHHHHHHHHHh---CCCcEEEeeeeecCCCCCc--
Confidence 6776444332 78999999999999998 4588999999999986421
Q ss_pred cccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEeccCCcccccHHHHHHH
Q psy6053 336 GWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLTSSQEWQVSWQEIIDI 415 (614)
Q Consensus 336 gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~~~~~~~it~~e~~~~ 415 (614)
....++..+..|....+.+ +...++++++|+|++++.++.++ .+++||++++ +++|+.|+++.
T Consensus 164 -------~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~Dva~~~~~~~~~~------~~~~~~i~~~--~~~s~~e~~~~ 226 (287)
T 3sc6_A 164 -------FVKTMIRLGKEREEISVVA--DQIGSPTYVADLNVMINKLIHTS------LYGTYHVSNT--GSCSWFEFAKK 226 (287)
T ss_dssp -------HHHHHHHHHTTCSEEEEEC--SCEECCEEHHHHHHHHHHHHTSC------CCEEEECCCB--SCEEHHHHHHH
T ss_pred -------HHHHHHHHHHcCCCeEeec--CcccCceEHHHHHHHHHHHHhCC------CCCeEEEcCC--CcccHHHHHHH
Confidence 1223444555565544444 48899999999999999988653 2679999999 88999999999
Q ss_pred HhhhcccccC
Q psy6053 416 GKSIVTTEVP 425 (614)
Q Consensus 416 ~~~~~g~~~p 425 (614)
+.+.+|.+.+
T Consensus 227 i~~~~g~~~~ 236 (287)
T 3sc6_A 227 IFSYANMKVN 236 (287)
T ss_dssp HHHHHTCCCE
T ss_pred HHHHcCCCcc
Confidence 9999887643
No 49
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=99.97 E-value=2.8e-29 Score=262.56 Aligned_cols=245 Identities=19% Similarity=0.205 Sum_probs=183.4
Q ss_pred cccccccCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEE
Q psy6053 94 DRIGETFTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVL 173 (614)
Q Consensus 94 ~~i~~~~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~ 173 (614)
.+....+++|+|||||||||||++|+++|++.|++ |++++|...... +. + . ...+++
T Consensus 13 ~~~~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~---V~~~~r~~~~~~--~~------------l-----~-~~~~~~ 69 (333)
T 2q1w_A 13 GLVPRGSHMKKVFITGICGQIGSHIAELLLERGDK---VVGIDNFATGRR--EH------------L-----K-DHPNLT 69 (333)
T ss_dssp --------CCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEECCSSCCG--GG------------S-----C-CCTTEE
T ss_pred ceeeecCCCCEEEEeCCccHHHHHHHHHHHHCCCE---EEEEECCCccch--hh------------H-----h-hcCCce
Confidence 34455577899999999999999999999999865 999999754321 00 0 0 114789
Q ss_pred EEeCCCCCCCCCCCHHHHHHHhcc--ccEEEEcccccChh--HHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEeCcee
Q psy6053 174 PISGDAEADELAIKESDRQLLASE--VDIMIHGAATIRFD--EALKKAVLLNTRGTKMMLSLAKEMKHLELFVHISTAYC 249 (614)
Q Consensus 174 ~v~gDl~~~~lGLs~~~~~~l~~~--vd~ViH~AA~v~~~--~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vST~~~ 249 (614)
++.+|+++++ .++.++++ +|+|||+||..... .... +++|+.||.+++++|.+ .++++|||+||.++
T Consensus 70 ~~~~Dl~d~~------~~~~~~~~~~~D~vih~A~~~~~~~~~~~~--~~~N~~~~~~l~~a~~~-~~~~~iV~~SS~~~ 140 (333)
T 2q1w_A 70 FVEGSIADHA------LVNQLIGDLQPDAVVHTAASYKDPDDWYND--TLTNCVGGSNVVQAAKK-NNVGRFVYFQTALC 140 (333)
T ss_dssp EEECCTTCHH------HHHHHHHHHCCSEEEECCCCCSCTTCHHHH--HHHHTHHHHHHHHHHHH-TTCSEEEEEEEGGG
T ss_pred EEEEeCCCHH------HHHHHHhccCCcEEEECceecCCCccCChH--HHHHHHHHHHHHHHHHH-hCCCEEEEECcHHH
Confidence 9999999865 78888887 99999999986541 2223 89999999999999999 48899999999987
Q ss_pred cc----CCc-ccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHH-HhhCCCCEEEeec
Q psy6053 250 HL----QEK-VLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVE-AMNNGMPCLMLRP 323 (614)
Q Consensus 250 ~~----~~~-~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~-~~~~glp~~IvRp 323 (614)
++ ... +++|+. .| ..+.|+.||+.+|++++. +. +++++||
T Consensus 141 ~g~~~~~~~~~~~E~~--~p----------------------------~~~~Y~~sK~~~E~~~~~s~~----~~~ilR~ 186 (333)
T 2q1w_A 141 YGVKPIQQPVRLDHPR--NP----------------------------ANSSYAISKSANEDYLEYSGL----DFVTFRL 186 (333)
T ss_dssp GCSCCCSSSBCTTSCC--CC----------------------------TTCHHHHHHHHHHHHHHHHTC----CEEEEEE
T ss_pred hCCCcccCCCCcCCCC--CC----------------------------CCCchHHHHHHHHHHHHhhhC----CeEEEee
Confidence 75 221 334431 00 116899999999999998 63 8999999
Q ss_pred ceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEeccCC
Q psy6053 324 SIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLTSSQ 403 (614)
Q Consensus 324 ~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~~~~ 403 (614)
+.+||+... . .....++..+..|. .+++ ++...++++++|+|++++.++... .+++||++++
T Consensus 187 ~~v~gp~~~--~------~~~~~~~~~~~~~~--~~~~-~~~~~~~i~v~Dva~ai~~~~~~~------~g~~~~v~~~- 248 (333)
T 2q1w_A 187 ANVVGPRNV--S------GPLPIFFQRLSEGK--KCFV-TKARRDFVFVKDLARATVRAVDGV------GHGAYHFSSG- 248 (333)
T ss_dssp SEEESTTCC--S------SHHHHHHHHHHTTC--CCEE-EECEECEEEHHHHHHHHHHHHTTC------CCEEEECSCS-
T ss_pred ceEECcCCc--C------cHHHHHHHHHHcCC--eeeC-CCceEeeEEHHHHHHHHHHHHhcC------CCCEEEeCCC-
Confidence 999998621 0 11223445555665 3445 677899999999999999888542 2789999998
Q ss_pred cccccHHHHHHHHhhhcccc
Q psy6053 404 EWQVSWQEIIDIGKSIVTTE 423 (614)
Q Consensus 404 ~~~it~~e~~~~~~~~~g~~ 423 (614)
.++++.|+++.+.+.+|.+
T Consensus 249 -~~~s~~e~~~~i~~~~g~~ 267 (333)
T 2q1w_A 249 -TDVAIKELYDAVVEAMALP 267 (333)
T ss_dssp -CCEEHHHHHHHHHHHTTCS
T ss_pred -CCccHHHHHHHHHHHhCCC
Confidence 8899999999999998876
No 50
>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}
Probab=99.97 E-value=1.5e-29 Score=262.60 Aligned_cols=258 Identities=16% Similarity=0.156 Sum_probs=172.9
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEEc-cCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCC
Q psy6053 102 GKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMR-QKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAE 180 (614)
Q Consensus 102 ~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR-~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~ 180 (614)
||+|||||||||||++++++|+++|++ |++++| +.......+.+.+ .+. ...++.++.||++
T Consensus 1 ~k~vlVTGatG~iG~~l~~~L~~~G~~---V~~~~r~~~~~~~~~~~~~~-------------~~~-~~~~~~~~~~Dl~ 63 (322)
T 2p4h_X 1 KGRVCVTGGTGFLGSWIIKSLLENGYS---VNTTIRADPERKRDVSFLTN-------------LPG-ASEKLHFFNADLS 63 (322)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCE---EEEECCCC----CCCHHHHT-------------STT-HHHHEEECCCCTT
T ss_pred CCEEEEECChhHHHHHHHHHHHHCCCE---EEEEEeCCccchhHHHHHHh-------------hhc-cCCceEEEecCCC
Confidence 579999999999999999999999876 888888 4321000011110 000 1136889999999
Q ss_pred CCCCCCCHHHHHHHhccccEEEEcccccChhH--HHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEeCceeccCC----c
Q psy6053 181 ADELAIKESDRQLLASEVDIMIHGAATIRFDE--ALKKAVLLNTRGTKMMLSLAKEMKHLELFVHISTAYCHLQE----K 254 (614)
Q Consensus 181 ~~~lGLs~~~~~~l~~~vd~ViH~AA~v~~~~--~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vST~~~~~~~----~ 254 (614)
+++ +++.+++++|+|||+|+.+.+.. +.+..+++|+.||.+++++|.+..++++|||+||.++.... .
T Consensus 64 d~~------~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~~~~~~~~~~~~ 137 (322)
T 2p4h_X 64 NPD------SFAAAIEGCVGIFHTASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSSGSAVSFNGKDKD 137 (322)
T ss_dssp CGG------GGHHHHTTCSEEEECCCCC--------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEEGGGTSCSSSCCS
T ss_pred CHH------HHHHHHcCCCEEEEcCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccHHHcccCCCCCe
Confidence 976 78889999999999998764432 23458899999999999999985368999999998643211 2
Q ss_pred ccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCC-chhhhHHHHHHHHHHHhh-CCCCEEEeecceeecccCC
Q psy6053 255 VLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPN-SYAYTKCLSEGLVVEAMN-NGMPCLMLRPSIIIPVWRE 332 (614)
Q Consensus 255 ~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn-~Y~~SK~~aE~lv~~~~~-~glp~~IvRp~~I~g~~~~ 332 (614)
+++|+..+. .+......| ++ .|+.||+++|+++.++.. .|++++++||+.|||+...
T Consensus 138 ~~~e~~~~~---------------~~~~~~~~p------~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~g~~~~ 196 (322)
T 2p4h_X 138 VLDESDWSD---------------VDLLRSVKP------FGWNYAVSKTLAEKAVLEFGEQNGIDVVTLILPFIVGRFVC 196 (322)
T ss_dssp EECTTCCCC---------------HHHHHHHCC------TTHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECEEESCCCS
T ss_pred ecCCccccc---------------hhhhcccCc------ccccHHHHHHHHHHHHHHHHHhcCCcEEEEcCCceECCCCC
Confidence 344442110 000000011 12 699999999999998775 6999999999999998653
Q ss_pred CCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEeccCCcccccHHHH
Q psy6053 333 PLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLTSSQEWQVSWQEI 412 (614)
Q Consensus 333 p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~~~~~~~it~~e~ 412 (614)
+. .......+.....|....+ +. ...++++++|+|++++.++.... ..+.|| +++ .++|+.|+
T Consensus 197 ~~------~~~~~~~~~~~~~g~~~~~-~~--~~~~~i~v~Dva~a~~~~~~~~~-----~~g~~~-~~~--~~~s~~e~ 259 (322)
T 2p4h_X 197 PK------LPDSIEKALVLVLGKKEQI-GV--TRFHMVHVDDVARAHIYLLENSV-----PGGRYN-CSP--FIVPIEEM 259 (322)
T ss_dssp SS------CCHHHHHHTHHHHSCGGGC-CE--EEEEEEEHHHHHHHHHHHHHSCC-----CCEEEE-CCC--EEEEHHHH
T ss_pred CC------CCchHHHHHHHHhCCCccC-cC--CCcCEEEHHHHHHHHHHHhhCcC-----CCCCEE-EcC--CCCCHHHH
Confidence 21 1111111212233332211 12 33489999999999999886532 233598 555 67999999
Q ss_pred HHHHhhhc
Q psy6053 413 IDIGKSIV 420 (614)
Q Consensus 413 ~~~~~~~~ 420 (614)
++.+.+..
T Consensus 260 ~~~i~~~~ 267 (322)
T 2p4h_X 260 SQLLSAKY 267 (322)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHhC
Confidence 99998874
No 51
>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2
Probab=99.97 E-value=3e-29 Score=265.82 Aligned_cols=262 Identities=15% Similarity=0.103 Sum_probs=190.6
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCCC
Q psy6053 102 GKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAEA 181 (614)
Q Consensus 102 ~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~~ 181 (614)
+|+|||||||||||++++++|++.|++ |++++|...... .++++++... ... ...++.++.+|+++
T Consensus 1 m~~vlVtGatG~iG~~l~~~L~~~g~~---V~~~~r~~~~~~-~~~~~~~~~~---------~~~-~~~~~~~~~~Dl~d 66 (372)
T 1db3_A 1 SKVALITGVTGQDGSYLAEFLLEKGYE---VHGIKRRASSFN-TERVDHIYQD---------PHT-CNPKFHLHYGDLSD 66 (372)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCE---EEEECC--------------------------------CCEEECCCCSSC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCE---EEEEECCCcccc-hHHHHHHhhc---------ccc-CCCceEEEECCCCC
Confidence 478999999999999999999999865 899999754311 1223222110 000 12478899999998
Q ss_pred CCCCCCHHHHHHHhcc--ccEEEEcccccChh---HHHHHHHHHhHHHHHHHHHHHHHcCCC---ceEEEEeCceeccCC
Q psy6053 182 DELAIKESDRQLLASE--VDIMIHGAATIRFD---EALKKAVLLNTRGTKMMLSLAKEMKHL---ELFVHISTAYCHLQE 253 (614)
Q Consensus 182 ~~lGLs~~~~~~l~~~--vd~ViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~la~~~~~~---k~~V~vST~~~~~~~ 253 (614)
++ ++..++++ +|+|||+||..... +.....+++|+.||.+++++|++. ++ ++|||+||.++++..
T Consensus 67 ~~------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~iv~~SS~~v~g~~ 139 (372)
T 1db3_A 67 TS------NLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFL-GLEKKTRFYQASTSELYGLV 139 (372)
T ss_dssp HH------HHHHHHHHHCCSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHT-TCTTTCEEEEEEEGGGGTTC
T ss_pred HH------HHHHHHHhcCCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHh-CCCCCcEEEEeCChhhhCCC
Confidence 65 78888775 69999999976532 345667899999999999999994 66 799999999877654
Q ss_pred c--ccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh-CCCCEEEeecceeeccc
Q psy6053 254 K--VLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN-NGMPCLMLRPSIIIPVW 330 (614)
Q Consensus 254 ~--~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~-~glp~~IvRp~~I~g~~ 330 (614)
. +++|+....| .+.|+.||+.+|++++.+.. .+++++++||+.+||+.
T Consensus 140 ~~~~~~E~~~~~~-----------------------------~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gp~ 190 (372)
T 1db3_A 140 QEIPQKETTPFYP-----------------------------RSPYAVAKLYAYWITVNYRESYGMYACNGILFNHESPR 190 (372)
T ss_dssp CSSSBCTTSCCCC-----------------------------CSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTT
T ss_pred CCCCCCccCCCCC-----------------------------CChHHHHHHHHHHHHHHHHHHhCCCeEEEEECCccCCC
Confidence 3 5556533222 27899999999999998876 58999999999999986
Q ss_pred CCCCccccCCCCchHHHHHHHhcCce-eeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEeccCCcccccH
Q psy6053 331 REPLPGWTDNINGPTGLLIGAGKGVI-RTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLTSSQEWQVSW 409 (614)
Q Consensus 331 ~~p~~gw~d~~~g~~~~~~~~~~g~~-~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~~~~~~~it~ 409 (614)
..+ ++.. .....++..+..|.. ....+++++.++++||+|+|++++.++.+. .+++||++++ +++|+
T Consensus 191 ~~~--~~~~--~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a~~~~~~~~------~~~~~ni~~~--~~~s~ 258 (372)
T 1db3_A 191 RGE--TFVT--RKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMMLQQE------QPEDFVIATG--VQYSV 258 (372)
T ss_dssp SCT--TSHH--HHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHHHHTTSSS------SCCCEEECCC--CCEEH
T ss_pred CCC--cchh--hHHHHHHHHHHcCCCCceeecCCCceeeeeEHHHHHHHHHHHHhcC------CCceEEEcCC--CceeH
Confidence 532 1100 001234444556653 345678899999999999999999887542 3479999998 88999
Q ss_pred HHHHHHHhhhcccccC
Q psy6053 410 QEIIDIGKSIVTTEVP 425 (614)
Q Consensus 410 ~e~~~~~~~~~g~~~p 425 (614)
.|+++.+.+.+|.+.+
T Consensus 259 ~e~~~~i~~~~g~~~~ 274 (372)
T 1db3_A 259 RQFVEMAAAQLGIKLR 274 (372)
T ss_dssp HHHHHHHHHTTTEEEE
T ss_pred HHHHHHHHHHhCCCcc
Confidence 9999999999887654
No 52
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=99.96 E-value=1.7e-29 Score=266.61 Aligned_cols=249 Identities=16% Similarity=0.175 Sum_probs=190.2
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhC-CCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKS-PNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGD 178 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g-~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gD 178 (614)
+++|+|||||||||||++|+++|++.| ++ |+++.|....... . ...++. +.+|
T Consensus 44 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~---V~~~~r~~~~~~~----~------------------~~~~~~-~~~d 97 (357)
T 2x6t_A 44 IEGRMIIVTGGAGFIGSNIVKALNDKGITD---ILVVDNLKDGTKF----V------------------NLVDLN-IADY 97 (357)
T ss_dssp ----CEEEETTTSHHHHHHHHHHHHTTCCC---EEEEECCSSGGGG----G------------------GTTTSC-CSEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCcE---EEEEecCCCcchh----h------------------cccCce-Eeee
Confidence 467899999999999999999999998 66 8899987643210 0 111222 6788
Q ss_pred CCCCCCCCCHHHHHHHhc-----cccEEEEcccccCh-hHHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEeCceeccC
Q psy6053 179 AEADELAIKESDRQLLAS-----EVDIMIHGAATIRF-DEALKKAVLLNTRGTKMMLSLAKEMKHLELFVHISTAYCHLQ 252 (614)
Q Consensus 179 l~~~~lGLs~~~~~~l~~-----~vd~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vST~~~~~~ 252 (614)
+++++ .++.+++ ++|+|||+||.... .......+++|+.||.+++++|++. ++ +|||+||.++++.
T Consensus 98 ~~~~~------~~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~-~~-r~V~~SS~~v~g~ 169 (357)
T 2x6t_A 98 MDKED------FLIQIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLER-EI-PFLYASSAATYGG 169 (357)
T ss_dssp EEHHH------HHHHHHTTCCCSSCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHH-TC-CEEEEEEGGGGCS
T ss_pred cCcHH------HHHHHHhhcccCCCCEEEECCcccCCccCCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEcchHHhCC
Confidence 88754 6777776 59999999997654 3456778999999999999999995 77 9999999987765
Q ss_pred Cc--ccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh-CCCCEEEeecceeecc
Q psy6053 253 EK--VLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN-NGMPCLMLRPSIIIPV 329 (614)
Q Consensus 253 ~~--~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~-~glp~~IvRp~~I~g~ 329 (614)
.. +++|+..+.| .+.|+.||+.+|++++.+.. .|++++++||+.|||+
T Consensus 170 ~~~~~~~E~~~~~p-----------------------------~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~Gp 220 (357)
T 2x6t_A 170 RTSDFIESREYEKP-----------------------------LNVFGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGP 220 (357)
T ss_dssp CSSCCCSSGGGCCC-----------------------------SSHHHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESS
T ss_pred CCCCCcCCcCCCCC-----------------------------CChhHHHHHHHHHHHHHHHHHcCCCEEEEecCeEECC
Confidence 43 4555532222 27899999999999999876 6899999999999999
Q ss_pred cCCCCccccCCCCc-hHHHHHHHhcCceeeEeeCCCc-cccceeHHHHHHHHHHHHHhhhhcCCCCccEEEeccCCcccc
Q psy6053 330 WREPLPGWTDNING-PTGLLIGAGKGVIRTMFCDNTG-YADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLTSSQEWQV 407 (614)
Q Consensus 330 ~~~p~~gw~d~~~g-~~~~~~~~~~g~~~~~~~~~~~-~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~~~~~~~i 407 (614)
...+.. +..+ ...++..+..|....++++++. ..++++++|+|++++.++.+. .+++||++++ +++
T Consensus 221 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ai~~~~~~~------~~~~~~i~~~--~~~ 288 (357)
T 2x6t_A 221 REGHKG----SMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENG------VSGIFNLGTG--RAE 288 (357)
T ss_dssp SCTTCG----GGSCHHHHHHHHHHTTCCCEEETTGGGCEECEEEHHHHHHHHHHHHHHC------CCEEEEESCS--CCE
T ss_pred CCCCCc----ccchHHHHHHHHHHcCCCcEEeCCCCcceEccEEHHHHHHHHHHHHhcC------CCCeEEecCC--Ccc
Confidence 764311 1112 2235555666665556677788 899999999999999988753 2679999998 889
Q ss_pred cHHHHHHHHhhhcccc
Q psy6053 408 SWQEIIDIGKSIVTTE 423 (614)
Q Consensus 408 t~~e~~~~~~~~~g~~ 423 (614)
|+.|+++.+.+.+|.+
T Consensus 289 s~~e~~~~i~~~~g~~ 304 (357)
T 2x6t_A 289 SFQAVADATLAYHKKG 304 (357)
T ss_dssp EHHHHHHHHHHHHTCC
T ss_pred cHHHHHHHHHHHcCCC
Confidence 9999999999998876
No 53
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=99.96 E-value=1e-28 Score=252.99 Aligned_cols=223 Identities=17% Similarity=0.107 Sum_probs=177.7
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCCC
Q psy6053 102 GKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAEA 181 (614)
Q Consensus 102 ~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~~ 181 (614)
.++|||||||||||++|+++|+++|++ |++++|. .+|+++
T Consensus 12 ~~~vlVtGatG~iG~~l~~~L~~~g~~---V~~~~r~-------------------------------------~~Dl~d 51 (292)
T 1vl0_A 12 HMKILITGANGQLGREIQKQLKGKNVE---VIPTDVQ-------------------------------------DLDITN 51 (292)
T ss_dssp CEEEEEESTTSHHHHHHHHHHTTSSEE---EEEECTT-------------------------------------TCCTTC
T ss_pred cceEEEECCCChHHHHHHHHHHhCCCe---EEeccCc-------------------------------------cCCCCC
Confidence 589999999999999999999999865 8888884 257776
Q ss_pred CCCCCCHHHHHHHhc--cccEEEEcccccChh---HHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEeCceeccCCc--
Q psy6053 182 DELAIKESDRQLLAS--EVDIMIHGAATIRFD---EALKKAVLLNTRGTKMMLSLAKEMKHLELFVHISTAYCHLQEK-- 254 (614)
Q Consensus 182 ~~lGLs~~~~~~l~~--~vd~ViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vST~~~~~~~~-- 254 (614)
++ ++..+++ ++|+|||+||..... ......+++|+.||.+++++|++. ++ +|||+||.++++...
T Consensus 52 ~~------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~-~~-~iv~~SS~~v~~~~~~~ 123 (292)
T 1vl0_A 52 VL------AVNKFFNEKKPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSV-GA-EIVQISTDYVFDGEAKE 123 (292)
T ss_dssp HH------HHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHH-TC-EEEEEEEGGGSCSCCSS
T ss_pred HH------HHHHHHHhcCCCEEEECCccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEechHHeECCCCCC
Confidence 54 7788877 799999999987643 456678999999999999999995 66 999999998776543
Q ss_pred ccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhhCCCCEEEeecceeecccCCCC
Q psy6053 255 VLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMNNGMPCLMLRPSIIIPVWREPL 334 (614)
Q Consensus 255 ~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~~glp~~IvRp~~I~g~~~~p~ 334 (614)
+++|+..+.| .+.|+.||+.+|++++.+ +.+++++||+.|||+ ..
T Consensus 124 ~~~E~~~~~~-----------------------------~~~Y~~sK~~~E~~~~~~---~~~~~~lR~~~v~G~-~~-- 168 (292)
T 1vl0_A 124 PITEFDEVNP-----------------------------QSAYGKTKLEGENFVKAL---NPKYYIVRTAWLYGD-GN-- 168 (292)
T ss_dssp CBCTTSCCCC-----------------------------CSHHHHHHHHHHHHHHHH---CSSEEEEEECSEESS-SS--
T ss_pred CCCCCCCCCC-----------------------------ccHHHHHHHHHHHHHHhh---CCCeEEEeeeeeeCC-Cc--
Confidence 5666543322 278999999999999988 457999999999998 32
Q ss_pred ccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEeccCCcccccHHHHHH
Q psy6053 335 PGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLTSSQEWQVSWQEIID 414 (614)
Q Consensus 335 ~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~~~~~~~it~~e~~~ 414 (614)
+ ....++..+..|......+ +...++++++|+|++++.++... .+++||++++ +++|+.|+++
T Consensus 169 -~------~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~Dva~~~~~~~~~~------~~~~~~i~~~--~~~s~~e~~~ 231 (292)
T 1vl0_A 169 -N------FVKTMINLGKTHDELKVVH--DQVGTPTSTVDLARVVLKVIDEK------NYGTFHCTCK--GICSWYDFAV 231 (292)
T ss_dssp -C------HHHHHHHHHHHCSEEEEES--SCEECCEEHHHHHHHHHHHHHHT------CCEEEECCCB--SCEEHHHHHH
T ss_pred -C------hHHHHHHHHhcCCcEEeec--CeeeCCccHHHHHHHHHHHHhcC------CCcEEEecCC--CCccHHHHHH
Confidence 1 1223444444555443443 57889999999999999988763 4679999998 8899999999
Q ss_pred HHhhhccccc
Q psy6053 415 IGKSIVTTEV 424 (614)
Q Consensus 415 ~~~~~~g~~~ 424 (614)
.+.+.+|.+.
T Consensus 232 ~i~~~~g~~~ 241 (292)
T 1vl0_A 232 EIFRLTGIDV 241 (292)
T ss_dssp HHHHHHCCCC
T ss_pred HHHHHhCCCC
Confidence 9999988764
No 54
>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*
Probab=99.96 E-value=1.8e-29 Score=264.16 Aligned_cols=261 Identities=13% Similarity=0.140 Sum_probs=175.9
Q ss_pred CCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCC
Q psy6053 101 TGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAE 180 (614)
Q Consensus 101 ~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~ 180 (614)
++|+|||||||||||++|+++|+++|++ |++++|+.... +++..+.+. +. ...+++++.+|++
T Consensus 4 ~~~~vlVTGatGfIG~~l~~~L~~~G~~---V~~~~r~~~~~---~~~~~~~~~----------~~-~~~~~~~~~~Dl~ 66 (337)
T 2c29_D 4 QSETVCVTGASGFIGSWLVMRLLERGYT---VRATVRDPTNV---KKVKHLLDL----------PK-AETHLTLWKADLA 66 (337)
T ss_dssp --CEEEETTTTSHHHHHHHHHHHHTTCE---EEEEESCTTCH---HHHHHHHTS----------TT-HHHHEEEEECCTT
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCE---EEEEECCcchh---HHHHHHHhc----------cc-CCCeEEEEEcCCC
Confidence 4689999999999999999999999876 88889975431 122221110 00 1136889999999
Q ss_pred CCCCCCCHHHHHHHhccccEEEEcccccChh--HHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEeCceec-cC---Cc
Q psy6053 181 ADELAIKESDRQLLASEVDIMIHGAATIRFD--EALKKAVLLNTRGTKMMLSLAKEMKHLELFVHISTAYCH-LQ---EK 254 (614)
Q Consensus 181 ~~~lGLs~~~~~~l~~~vd~ViH~AA~v~~~--~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vST~~~~-~~---~~ 254 (614)
+++ ++..+++++|+|||+||...+. .+.+..+++|+.||.+++++|++..++++|||+||..+. +. ..
T Consensus 67 d~~------~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~~~~~ 140 (337)
T 2c29_D 67 DEG------SFDEAIKGCTGVFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQLP 140 (337)
T ss_dssp STT------TTHHHHTTCSEEEECCCCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSCSSSCCS
T ss_pred CHH------HHHHHHcCCCEEEEeccccCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcccCCCCCc
Confidence 987 6888889999999999976542 334467899999999999999985348999999998632 22 12
Q ss_pred ccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh-CCCCEEEeecceeecccCCC
Q psy6053 255 VLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN-NGMPCLMLRPSIIIPVWREP 333 (614)
Q Consensus 255 ~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~-~glp~~IvRp~~I~g~~~~p 333 (614)
.++|+.+. +.+ ...... ...+.|+.||.++|+++.++.. .|++++++||+.|||+...+
T Consensus 141 ~~~E~~~~-~~~--------------~~~~~~-----~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~ 200 (337)
T 2c29_D 141 VYDESCWS-DME--------------FCRAKK-----MTAWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMS 200 (337)
T ss_dssp EECTTCCC-CHH--------------HHHHHC-----CTTHHHHHHHHHHHHHHHHHHHHHTCCEEEEEECEEESCCSCS
T ss_pred ccCcccCC-chh--------------hhcccC-----CccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCC
Confidence 35554221 100 000000 0124699999999999988764 59999999999999997543
Q ss_pred CccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEeccCCcccccHHHHH
Q psy6053 334 LPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLTSSQEWQVSWQEII 413 (614)
Q Consensus 334 ~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~~~~~~~it~~e~~ 413 (614)
. +............|... ..+.. ....+++|+|+|++++.++.+.. ..+.|+++++ .+|+.|++
T Consensus 201 ~------~~~~~~~~~~~~~g~~~-~~~~~-~~~~~i~v~Dva~a~~~~~~~~~-----~~~~~~~~~~---~~s~~e~~ 264 (337)
T 2c29_D 201 S------MPPSLITALSPITGNEA-HYSII-RQGQFVHLDDLCNAHIYLFENPK-----AEGRYICSSH---DCIILDLA 264 (337)
T ss_dssp S------CCHHHHHHTHHHHTCGG-GHHHH-TEEEEEEHHHHHHHHHHHHHCTT-----CCEEEEECCE---EEEHHHHH
T ss_pred C------CCchHHHHHHHHcCCCc-ccccc-CCCCEEEHHHHHHHHHHHhcCcc-----cCceEEEeCC---CCCHHHHH
Confidence 1 11111111011222211 11111 12349999999999999886532 3457877554 58999999
Q ss_pred HHHhhhc
Q psy6053 414 DIGKSIV 420 (614)
Q Consensus 414 ~~~~~~~ 420 (614)
+.+.+.+
T Consensus 265 ~~i~~~~ 271 (337)
T 2c29_D 265 KMLREKY 271 (337)
T ss_dssp HHHHHHC
T ss_pred HHHHHHC
Confidence 9999875
No 55
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=99.96 E-value=1.7e-29 Score=264.05 Aligned_cols=279 Identities=13% Similarity=0.105 Sum_probs=195.2
Q ss_pred cccccCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEE
Q psy6053 96 IGETFTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPI 175 (614)
Q Consensus 96 i~~~~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v 175 (614)
++.++++|+|||||||||||++|+++|++.|++ |++++|+... .+++.+.+. .. ...+++++
T Consensus 5 ~~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~---V~~~~r~~~~---~~~~~~~~~--------~~----~~~~~~~~ 66 (342)
T 1y1p_A 5 NAVLPEGSLVLVTGANGFVASHVVEQLLEHGYK---VRGTARSASK---LANLQKRWD--------AK----YPGRFETA 66 (342)
T ss_dssp TCSSCTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESSHHH---HHHHHHHHH--------HH----STTTEEEE
T ss_pred cccCCCCCEEEEECCccHHHHHHHHHHHHCCCE---EEEEeCCccc---HHHHHHHhh--------cc----CCCceEEE
Confidence 445678899999999999999999999999875 8999996421 222222111 00 12468888
Q ss_pred -eCCCCCCCCCCCHHHHHHHhccccEEEEcccccChhHHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEeCceeccCC-
Q psy6053 176 -SGDAEADELAIKESDRQLLASEVDIMIHGAATIRFDEALKKAVLLNTRGTKMMLSLAKEMKHLELFVHISTAYCHLQE- 253 (614)
Q Consensus 176 -~gDl~~~~lGLs~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vST~~~~~~~- 253 (614)
.+|+++++ .++.+++++|+|||+||...........+++|+.||.+++++|.+..++++|||+||.++++..
T Consensus 67 ~~~D~~d~~------~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~~~~~~~ 140 (342)
T 1y1p_A 67 VVEDMLKQG------AYDEVIKGAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPK 140 (342)
T ss_dssp ECSCTTSTT------TTTTTTTTCSEEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCC
T ss_pred EecCCcChH------HHHHHHcCCCEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHhcCCC
Confidence 89999876 6777788999999999987665566778999999999999999853478999999999776422
Q ss_pred -----cccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh---CCCCEEEeecce
Q psy6053 254 -----KVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN---NGMPCLMLRPSI 325 (614)
Q Consensus 254 -----~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~---~glp~~IvRp~~ 325 (614)
.+++|+.+.. .......+ ........| .+.|+.||+.+|++++.+.. .+++++++||+.
T Consensus 141 ~~~~~~~~~E~~~~~----~~~~~~~~---~~~~~~~~~------~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~ 207 (342)
T 1y1p_A 141 PNVEGIYLDEKSWNL----ESIDKAKT---LPESDPQKS------LWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNY 207 (342)
T ss_dssp TTCCCCEECTTCCCH----HHHHHHHH---SCTTSTTHH------HHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESE
T ss_pred CCCCCcccCccccCc----hhhhhhcc---ccccccccc------hHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCc
Confidence 3455653210 00000000 000000011 26899999999999988865 278999999999
Q ss_pred eecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEeccCCcc
Q psy6053 326 IIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLTSSQEW 405 (614)
Q Consensus 326 I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~~~~~~ 405 (614)
|||+...+... . .....++..+..|....+.+++ ...++++++|+|++++.++.+... .+..+ ++++ .
T Consensus 208 v~g~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~v~Dva~a~~~~~~~~~~----~g~~~-~~~g--~ 275 (342)
T 1y1p_A 208 TIGTIFDPETQ---S-GSTSGWMMSLFNGEVSPALALM-PPQYYVSAVDIGLLHLGCLVLPQI----ERRRV-YGTA--G 275 (342)
T ss_dssp EECCCSCTTTC---C-CHHHHHHHHHHTTCCCHHHHTC-CSEEEEEHHHHHHHHHHHHHCTTC----CSCEE-EECC--E
T ss_pred eECCCCCCCCC---C-ccHHHHHHHHHcCCCccccccC-CcCCEeEHHHHHHHHHHHHcCccc----CCceE-EEeC--C
Confidence 99997654211 0 1233455566666544434444 678999999999999998876431 34444 4455 6
Q ss_pred cccHHHHHHHHhhhcccc
Q psy6053 406 QVSWQEIIDIGKSIVTTE 423 (614)
Q Consensus 406 ~it~~e~~~~~~~~~g~~ 423 (614)
++|+.|+++.+.+.+|.+
T Consensus 276 ~~s~~e~~~~i~~~~~~~ 293 (342)
T 1y1p_A 276 TFDWNTVLATFRKLYPSK 293 (342)
T ss_dssp EECHHHHHHHHHHHCTTS
T ss_pred CCCHHHHHHHHHHHCCCc
Confidence 799999999999998764
No 56
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=99.96 E-value=1.1e-28 Score=262.78 Aligned_cols=257 Identities=15% Similarity=0.082 Sum_probs=191.4
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccC-eEEEEeCCCCC
Q psy6053 103 KTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIID-KVLPISGDAEA 181 (614)
Q Consensus 103 ~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~-~v~~v~gDl~~ 181 (614)
|+|||||||||||++|+++|++.|++ |++++|....... ++++++ ..+... ... ++.++.+|+++
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~g~~---V~~~~r~~~~~~~-~~~~~~---------~~~~~~-~~~~~~~~~~~Dl~d 94 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGKGYE---VHGLIRRSSNFNT-QRINHI---------YIDPHN-VNKALMKLHYADLTD 94 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCE---EEEEECCCSSCCC-TTTTTT---------C---------CCEEEEECCTTC
T ss_pred CeEEEEcCCchHHHHHHHHHHHCCCE---EEEEecCCccccc-hhhhhh---------hhcccc-ccccceEEEECCCCC
Confidence 68999999999999999999999865 8999997643110 011100 000000 112 78999999998
Q ss_pred CCCCCCHHHHHHHhcc--ccEEEEcccccChh---HHHHHHHHHhHHHHHHHHHHHHHcCCCc-----eEEEEeCceecc
Q psy6053 182 DELAIKESDRQLLASE--VDIMIHGAATIRFD---EALKKAVLLNTRGTKMMLSLAKEMKHLE-----LFVHISTAYCHL 251 (614)
Q Consensus 182 ~~lGLs~~~~~~l~~~--vd~ViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~la~~~~~~k-----~~V~vST~~~~~ 251 (614)
++ .+..++++ +|+|||+||..... ......+++|+.||.+++++|.+. +++ +|||+||.++++
T Consensus 95 ~~------~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~-~~~~~~~~~~v~~SS~~vyg 167 (381)
T 1n7h_A 95 AS------SLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSH-TIDSGRTVKYYQAGSSEMFG 167 (381)
T ss_dssp HH------HHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHH-HHHHCCCCEEEEEEEGGGGT
T ss_pred HH------HHHHHHHhcCCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHh-CCccCCccEEEEeCcHHHhC
Confidence 65 78888875 69999999987753 345678899999999999999985 565 999999998876
Q ss_pred CCc-ccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh-CCCCEEEeecceeecc
Q psy6053 252 QEK-VLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN-NGMPCLMLRPSIIIPV 329 (614)
Q Consensus 252 ~~~-~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~-~glp~~IvRp~~I~g~ 329 (614)
... +++|+....| .+.|+.||+.+|++++.+.. .+++++++|++++||+
T Consensus 168 ~~~~~~~E~~~~~~-----------------------------~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~r~~~~~gp 218 (381)
T 1n7h_A 168 STPPPQSETTPFHP-----------------------------RSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESP 218 (381)
T ss_dssp TSCSSBCTTSCCCC-----------------------------CSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECT
T ss_pred CCCCCCCCCCCCCC-----------------------------CCchHHHHHHHHHHHHHHHHHhCCcEEEEEeCceeCC
Confidence 533 4555532222 27899999999999998876 5899999999999998
Q ss_pred cCCCCccccCCCCc--hHHHHHHHhcCce-eeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEeccCCccc
Q psy6053 330 WREPLPGWTDNING--PTGLLIGAGKGVI-RTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLTSSQEWQ 406 (614)
Q Consensus 330 ~~~p~~gw~d~~~g--~~~~~~~~~~g~~-~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~~~~~~~ 406 (614)
...+ +... ...++..+..|.. ....++++...++++|+|+|++++.++... .+++||++++ ++
T Consensus 219 ~~~~------~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~------~~~~~~i~~~--~~ 284 (381)
T 1n7h_A 219 RRGE------NFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAMWLMLQQE------KPDDYVVATE--EG 284 (381)
T ss_dssp TSCT------TSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHHHHHHHHHTSS------SCCEEEECCS--CE
T ss_pred CCCC------cchhHHHHHHHHHHHcCCCCeEEeCCCCceeeeEEHHHHHHHHHHHHhCC------CCCeEEeeCC--CC
Confidence 6421 1111 1223444455543 334678889999999999999999988653 3479999998 88
Q ss_pred ccHHHHHHHHhhhcccc
Q psy6053 407 VSWQEIIDIGKSIVTTE 423 (614)
Q Consensus 407 it~~e~~~~~~~~~g~~ 423 (614)
+|+.|+++.+.+.+|.+
T Consensus 285 ~s~~e~~~~i~~~~g~~ 301 (381)
T 1n7h_A 285 HTVEEFLDVSFGYLGLN 301 (381)
T ss_dssp EEHHHHHHHHHHHTTCC
T ss_pred CcHHHHHHHHHHHcCCC
Confidence 99999999999998875
No 57
>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2
Probab=99.96 E-value=1.3e-29 Score=261.48 Aligned_cols=245 Identities=17% Similarity=0.165 Sum_probs=175.4
Q ss_pred EEEEecccccccHHHHHHHHhhC-CCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCCCC
Q psy6053 104 TLFMTGASGFLGKVLLEKILRKS-PNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAEAD 182 (614)
Q Consensus 104 ~VLITGaTGFlG~~Ll~~Ll~~g-~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~~~ 182 (614)
+|||||||||||++|+++|++.| ++ |+++.|....... +.+ .++. +.+|++++
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~g~~~---V~~~~r~~~~~~~-~~~---------------------~~~~-~~~d~~~~ 54 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDKGITD---ILVVDNLKDGTKF-VNL---------------------VDLN-IADYMDKE 54 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCC---EEEEECCSSGGGG-HHH---------------------HTSC-CSEEEEHH
T ss_pred CEEEEcCccHHHHHHHHHHHHCCCcE---EEEEccCCCCchh-hhc---------------------Ccce-eccccccH
Confidence 48999999999999999999998 66 8899987643211 111 0122 67888875
Q ss_pred CCCCCHHHHHHHhcc-----ccEEEEcccccCh-hHHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEeCceeccCCc--
Q psy6053 183 ELAIKESDRQLLASE-----VDIMIHGAATIRF-DEALKKAVLLNTRGTKMMLSLAKEMKHLELFVHISTAYCHLQEK-- 254 (614)
Q Consensus 183 ~lGLs~~~~~~l~~~-----vd~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vST~~~~~~~~-- 254 (614)
+ .++.++++ +|+|||+||.... ..+....+++|+.||.+++++|++. ++ +|||+||.++++...
T Consensus 55 ~------~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~-~~v~~SS~~v~g~~~~~ 126 (310)
T 1eq2_A 55 D------FLIQIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLER-EI-PFLYASSAATYGGRTSD 126 (310)
T ss_dssp H------HHHHHHTTCCCSSCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHH-TC-CEEEEEEGGGGTTCCSC
T ss_pred H------HHHHHHhccccCCCcEEEECcccccCcccCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEeeHHHhCCCCCC
Confidence 4 67888775 9999999998754 2346778999999999999999995 77 999999998876543
Q ss_pred ccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh-CCCCEEEeecceeecccCCC
Q psy6053 255 VLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN-NGMPCLMLRPSIIIPVWREP 333 (614)
Q Consensus 255 ~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~-~glp~~IvRp~~I~g~~~~p 333 (614)
+++|+..+.| .+.|+.||+.+|+++..+.. .|++++++||+.|||+...+
T Consensus 127 ~~~E~~~~~p-----------------------------~~~Y~~sK~~~e~~~~~~~~~~g~~~~~lrp~~v~G~~~~~ 177 (310)
T 1eq2_A 127 FIESREYEKP-----------------------------LNVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGH 177 (310)
T ss_dssp BCSSGGGCCC-----------------------------SSHHHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCGG
T ss_pred CCCCCCCCCC-----------------------------CChhHHHHHHHHHHHHHHHHHcCCCEEEEeCCcEECcCCCC
Confidence 4555532222 27899999999999999876 68999999999999987532
Q ss_pred CccccCCCCch-HHHHHHHhcCceeeEeeCCCc-cccceeHHHHHHHHHHHHHhhhhcCCCCccEEEeccCCcccccHHH
Q psy6053 334 LPGWTDNINGP-TGLLIGAGKGVIRTMFCDNTG-YADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLTSSQEWQVSWQE 411 (614)
Q Consensus 334 ~~gw~d~~~g~-~~~~~~~~~g~~~~~~~~~~~-~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~~~~~~~it~~e 411 (614)
.. +..+. ..++..+..|....++++++. .+++++++|+|++++.++.+. .+++||++++ +++|+.|
T Consensus 178 ~~----~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~Dva~~~~~~~~~~------~~~~~~i~~~--~~~s~~e 245 (310)
T 1eq2_A 178 KG----SMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENG------VSGIFNLGTG--RAESFQA 245 (310)
T ss_dssp GG----GGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHHHHC------CCEEEEESCS--CCBCHHH
T ss_pred CC----ccchHHHHHHHHHHcCCCcEEecCCCcceEccEEHHHHHHHHHHHHhcC------CCCeEEEeCC--CccCHHH
Confidence 11 11122 235555566665555677888 999999999999999988753 2679999998 8899999
Q ss_pred HHHHHhhhcccc
Q psy6053 412 IIDIGKSIVTTE 423 (614)
Q Consensus 412 ~~~~~~~~~g~~ 423 (614)
+++.+.+.+|.+
T Consensus 246 ~~~~i~~~~g~~ 257 (310)
T 1eq2_A 246 VADATLAYHKKG 257 (310)
T ss_dssp HHHHC-------
T ss_pred HHHHHHHHcCCC
Confidence 999999998875
No 58
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=99.96 E-value=1.4e-28 Score=253.12 Aligned_cols=230 Identities=10% Similarity=0.062 Sum_probs=168.7
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCCCC
Q psy6053 103 KTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAEAD 182 (614)
Q Consensus 103 ~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~~~ 182 (614)
|+|||||||||||++|+++|+++|++ |++++|++... ++ ..|
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~---V~~l~R~~~~~----------------------------~~---~~~---- 42 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHE---VTLVSRKPGPG----------------------------RI---TWD---- 42 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESSCCTT----------------------------EE---EHH----
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCE---EEEEECCCCcC----------------------------ee---ecc----
Confidence 68999999999999999999999987 89999975321 11 111
Q ss_pred CCCCCHHHHHHHhccccEEEEccccc------Chh-HHHHHHHHHhHHHHHHHHHHHHHcC-CCceEEEEeCceeccCCc
Q psy6053 183 ELAIKESDRQLLASEVDIMIHGAATI------RFD-EALKKAVLLNTRGTKMMLSLAKEMK-HLELFVHISTAYCHLQEK 254 (614)
Q Consensus 183 ~lGLs~~~~~~l~~~vd~ViH~AA~v------~~~-~~~~~~~~~Nv~gt~~ll~la~~~~-~~k~~V~vST~~~~~~~~ 254 (614)
+.....++++|+|||+|+.. ++. ...+...+.|+.||++++++|++.+ +.+.||+.||++++++..
T Consensus 43 ------~~~~~~l~~~d~vihla~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg~~~ 116 (298)
T 4b4o_A 43 ------ELAASGLPSCDAAVNLAGENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPSL 116 (298)
T ss_dssp ------HHHHHCCCSCSEEEECCCCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSCCCS
T ss_pred ------hhhHhhccCCCEEEEeccCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeeecCCC
Confidence 12233457899999999842 122 2335678999999999999999853 344589999998777643
Q ss_pred --ccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhhCCCCEEEeecceeecccCC
Q psy6053 255 --VLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMNNGMPCLMLRPSIIIPVWRE 332 (614)
Q Consensus 255 --~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~~glp~~IvRp~~I~g~~~~ 332 (614)
.++|+..+.|. +.|+.+|...|....... .+++++++||+.|||+..
T Consensus 117 ~~~~~E~~p~~~~-----------------------------~~~~~~~~~~e~~~~~~~-~~~~~~~~r~~~v~g~~~- 165 (298)
T 4b4o_A 117 TAEYDEDSPGGDF-----------------------------DFFSNLVTKWEAAARLPG-DSTRQVVVRSGVVLGRGG- 165 (298)
T ss_dssp SCCBCTTCCCSCS-----------------------------SHHHHHHHHHHHHHCCSS-SSSEEEEEEECEEECTTS-
T ss_pred CCcccccCCcccc-----------------------------chhHHHHHHHHHHHHhhc-cCCceeeeeeeeEEcCCC-
Confidence 55665332221 456677776666543322 589999999999999853
Q ss_pred CCccccCCCCchH-HHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEeccCCcccccHHH
Q psy6053 333 PLPGWTDNINGPT-GLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLTSSQEWQVSWQE 411 (614)
Q Consensus 333 p~~gw~d~~~g~~-~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~~~~~~~it~~e 411 (614)
+.. .++.....|.. ...+++++.+++|||||+|++++.++.++. ..++||++++ +++|++|
T Consensus 166 ----------~~~~~~~~~~~~~~~-~~~g~g~~~~~~ihv~Dva~a~~~~~~~~~-----~~g~yn~~~~--~~~t~~e 227 (298)
T 4b4o_A 166 ----------GAMGHMLLPFRLGLG-GPIGSGHQFFPWIHIGDLAGILTHALEANH-----VHGVLNGVAP--SSATNAE 227 (298)
T ss_dssp ----------HHHHHHHHHHHTTCC-CCBTTSCSBCCEEEHHHHHHHHHHHHHCTT-----CCEEEEESCS--CCCBHHH
T ss_pred ----------CchhHHHHHHhcCCc-ceecccCceeecCcHHHHHHHHHHHHhCCC-----CCCeEEEECC--CccCHHH
Confidence 122 23333344443 345899999999999999999999998764 4569999999 9999999
Q ss_pred HHHHHhhhcccccC
Q psy6053 412 IIDIGKSIVTTEVP 425 (614)
Q Consensus 412 ~~~~~~~~~g~~~p 425 (614)
+++.+.+.+|++.+
T Consensus 228 ~~~~ia~~lgrp~~ 241 (298)
T 4b4o_A 228 FAQTFGAALGRRAF 241 (298)
T ss_dssp HHHHHHHHHTCCCC
T ss_pred HHHHHHHHhCcCCc
Confidence 99999999887543
No 59
>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}
Probab=99.96 E-value=4.6e-28 Score=253.82 Aligned_cols=259 Identities=15% Similarity=0.135 Sum_probs=194.7
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCC----ccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEE
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPN----VKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPI 175 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~----v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v 175 (614)
+++|+|||||||||||++|+++|++.|+. +.+|++++|....... . ...++.++
T Consensus 12 ~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~---------------------~-~~~~~~~~ 69 (342)
T 2hrz_A 12 FQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA---------------------G-FSGAVDAR 69 (342)
T ss_dssp CSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT---------------------T-CCSEEEEE
T ss_pred ccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc---------------------c-cCCceeEE
Confidence 67899999999999999999999999820 0248999997643210 0 23578999
Q ss_pred eCCCCCCCCCCCHHHHHHHh-ccccEEEEcccccCh--hHHHHHHHHHhHHHHHHHHHHHHHcC----CCceEEEEeCce
Q psy6053 176 SGDAEADELAIKESDRQLLA-SEVDIMIHGAATIRF--DEALKKAVLLNTRGTKMMLSLAKEMK----HLELFVHISTAY 248 (614)
Q Consensus 176 ~gDl~~~~lGLs~~~~~~l~-~~vd~ViH~AA~v~~--~~~~~~~~~~Nv~gt~~ll~la~~~~----~~k~~V~vST~~ 248 (614)
.+|+++++ .++.++ .++|+|||+||.... .+.+...+++|+.||.+++++|++.. ++++|||+||.+
T Consensus 70 ~~Dl~d~~------~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~ 143 (342)
T 2hrz_A 70 AADLSAPG------EAEKLVEARPDVIFHLAAIVSGEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIA 143 (342)
T ss_dssp ECCTTSTT------HHHHHHHTCCSEEEECCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGG
T ss_pred EcCCCCHH------HHHHHHhcCCCEEEECCccCcccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchH
Confidence 99999987 788877 489999999997653 24566788999999999999999853 278999999998
Q ss_pred eccCC--cccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh-CCCCEEEeecce
Q psy6053 249 CHLQE--KVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN-NGMPCLMLRPSI 325 (614)
Q Consensus 249 ~~~~~--~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~-~glp~~IvRp~~ 325 (614)
+++.. .+++|+..+.| .+.|+.||+.+|+++.++.. .+++.+++|++.
T Consensus 144 ~~~~~~~~~~~E~~~~~~-----------------------------~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~ 194 (342)
T 2hrz_A 144 VFGAPLPYPIPDEFHTTP-----------------------------LTSYGTQKAICELLLSDYSRRGFFDGIGIRLPT 194 (342)
T ss_dssp GCCSSCCSSBCTTCCCCC-----------------------------SSHHHHHHHHHHHHHHHHHHTTSCEEEEEEECE
T ss_pred hhCCCCCCCcCCCCCCCC-----------------------------cchHHHHHHHHHHHHHHHHHhcCCCceeEEeee
Confidence 77653 35666533222 26899999999999998876 579999999999
Q ss_pred eecccCCCCccccCCCC-c-hHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEeccCC
Q psy6053 326 IIPVWREPLPGWTDNIN-G-PTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLTSSQ 403 (614)
Q Consensus 326 I~g~~~~p~~gw~d~~~-g-~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~~~~ 403 (614)
|+|.. |+..+.. . ...++.....|....++++++...++++++|+|++++.++...... ...+++||++ +
T Consensus 195 v~g~p-----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~~~~~~~~~~~~~-~~~~~~~ni~-g- 266 (342)
T 2hrz_A 195 ICIRP-----GKPNAAASGFFSNILREPLVGQEAVLPVPESIRHWHASPRSAVGFLIHGAMIDVEK-VGPRRNLSMP-G- 266 (342)
T ss_dssp ETTCC-----SSCCCSGGGHHHHHHHHHHTTCCEEECSCTTCEEEEECHHHHHHHHHHHHHSCHHH-HCSCCEEECC-C-
T ss_pred EEecC-----CCCcchhHHHHHHHHHHHhcCCCeeccCCCccceeeEehHHHHHHHHHHHhccccc-cCCccEEEcC-C-
Confidence 99831 2221111 1 2234555566665555566677788999999999999988754310 0146799995 4
Q ss_pred cccccHHHHHHHHhhhccccc
Q psy6053 404 EWQVSWQEIIDIGKSIVTTEV 424 (614)
Q Consensus 404 ~~~it~~e~~~~~~~~~g~~~ 424 (614)
+++|+.|+++.+.+.+|.+.
T Consensus 267 -~~~s~~e~~~~i~~~~g~~~ 286 (342)
T 2hrz_A 267 -LSATVGEQIEALRKVAGEKA 286 (342)
T ss_dssp -EEEEHHHHHHHHHHHHCHHH
T ss_pred -CCCCHHHHHHHHHHHcCccc
Confidence 57999999999999988754
No 60
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=99.96 E-value=4e-28 Score=247.82 Aligned_cols=220 Identities=16% Similarity=0.174 Sum_probs=172.5
Q ss_pred cEEEEecccccccHHHHHHHHhh--CCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCC
Q psy6053 103 KTLFMTGASGFLGKVLLEKILRK--SPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAE 180 (614)
Q Consensus 103 ~~VLITGaTGFlG~~Ll~~Ll~~--g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~ 180 (614)
|+|||||||||+|++++++|+++ |++ |++++|+.... +.+ ...+++++.+|++
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~---V~~~~r~~~~~---~~l-------------------~~~~~~~~~~D~~ 55 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQ---IIAIVRNVEKA---STL-------------------ADQGVEVRHGDYN 55 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGG---EEEEESCTTTT---HHH-------------------HHTTCEEEECCTT
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCe---EEEEEcCHHHH---hHH-------------------hhcCCeEEEeccC
Confidence 57999999999999999999998 766 89999975432 111 1135789999999
Q ss_pred CCCCCCCHHHHHHHhccccEEEEcccccChhHHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEeCceeccCCccccccc
Q psy6053 181 ADELAIKESDRQLLASEVDIMIHGAATIRFDEALKKAVLLNTRGTKMMLSLAKEMKHLELFVHISTAYCHLQEKVLYEKP 260 (614)
Q Consensus 181 ~~~lGLs~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vST~~~~~~~~~i~E~~ 260 (614)
+++ ++..+++++|+|||+||.. ... ++|+.|+.+++++|++ .++++|||+||.+++..
T Consensus 56 d~~------~l~~~~~~~d~vi~~a~~~-~~~------~~n~~~~~~l~~a~~~-~~~~~~v~~Ss~~~~~~-------- 113 (287)
T 2jl1_A 56 QPE------SLQKAFAGVSKLLFISGPH-YDN------TLLIVQHANVVKAARD-AGVKHIAYTGYAFAEES-------- 113 (287)
T ss_dssp CHH------HHHHHTTTCSEEEECCCCC-SCH------HHHHHHHHHHHHHHHH-TTCSEEEEEEETTGGGC--------
T ss_pred CHH------HHHHHHhcCCEEEEcCCCC-cCc------hHHHHHHHHHHHHHHH-cCCCEEEEECCCCCCCC--------
Confidence 865 8999999999999999963 211 6799999999999999 48999999999876310
Q ss_pred CCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhhCCCCEEEeecceeecccCCCCccccCC
Q psy6053 261 YPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMNNGMPCLMLRPSIIIPVWREPLPGWTDN 340 (614)
Q Consensus 261 ~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~~glp~~IvRp~~I~g~~~~p~~gw~d~ 340 (614)
|..|+.+|+.+|+++++. |++++++||+.++|+.. +.+
T Consensus 114 ---------------------------------~~~y~~~K~~~E~~~~~~---~~~~~ilrp~~~~~~~~---~~~--- 151 (287)
T 2jl1_A 114 ---------------------------------IIPLAHVHLATEYAIRTT---NIPYTFLRNALYTDFFV---NEG--- 151 (287)
T ss_dssp ---------------------------------CSTHHHHHHHHHHHHHHT---TCCEEEEEECCBHHHHS---SGG---
T ss_pred ---------------------------------CCchHHHHHHHHHHHHHc---CCCeEEEECCEeccccc---hhh---
Confidence 257999999999999763 89999999998887531 111
Q ss_pred CCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEeccCCcccccHHHHHHHHhhhc
Q psy6053 341 INGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLTSSQEWQVSWQEIIDIGKSIV 420 (614)
Q Consensus 341 ~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~~~~~~~it~~e~~~~~~~~~ 420 (614)
+......|... .+.++...++++++|+|++++.++.++. ..+++||++++ +++|+.|+++.+.+.+
T Consensus 152 ------~~~~~~~~~~~--~~~~~~~~~~i~~~Dva~~~~~~~~~~~----~~g~~~~i~~~--~~~s~~e~~~~i~~~~ 217 (287)
T 2jl1_A 152 ------LRASTESGAIV--TNAGSGIVNSVTRNELALAAATVLTEEG----HENKTYNLVSN--QPWTFDELAQILSEVS 217 (287)
T ss_dssp ------GHHHHHHTEEE--ESCTTCCBCCBCHHHHHHHHHHHHTSSS----CTTEEEEECCS--SCBCHHHHHHHHHHHH
T ss_pred ------HHHHhhCCcee--ccCCCCccCccCHHHHHHHHHHHhcCCC----CCCcEEEecCC--CcCCHHHHHHHHHHHH
Confidence 11112234322 4556788999999999999999886543 25789999998 8899999999999998
Q ss_pred ccccC
Q psy6053 421 TTEVP 425 (614)
Q Consensus 421 g~~~p 425 (614)
|.+.+
T Consensus 218 g~~~~ 222 (287)
T 2jl1_A 218 GKKVV 222 (287)
T ss_dssp SSCCE
T ss_pred CCcce
Confidence 87644
No 61
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=99.96 E-value=1.1e-27 Score=251.76 Aligned_cols=243 Identities=17% Similarity=0.149 Sum_probs=186.2
Q ss_pred CcccccccCCcEEEEecccccccHHHHHHHHhh-CCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCe
Q psy6053 93 PDRIGETFTGKTLFMTGASGFLGKVLLEKILRK-SPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDK 171 (614)
Q Consensus 93 ~~~i~~~~~~~~VLITGaTGFlG~~Ll~~Ll~~-g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~ 171 (614)
.+++.+++++|+|||||||||+|++++++|++. |+. +|+++.|.... .+.+.+.+ ...+
T Consensus 12 ~~~~~~~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~--~V~~~~r~~~~---~~~~~~~~---------------~~~~ 71 (344)
T 2gn4_A 12 MPNHQNMLDNQTILITGGTGSFGKCFVRKVLDTTNAK--KIIVYSRDELK---QSEMAMEF---------------NDPR 71 (344)
T ss_dssp ----CCTTTTCEEEEETTTSHHHHHHHHHHHHHCCCS--EEEEEESCHHH---HHHHHHHH---------------CCTT
T ss_pred CccHHHhhCCCEEEEECCCcHHHHHHHHHHHhhCCCC--EEEEEECChhh---HHHHHHHh---------------cCCC
Confidence 345677889999999999999999999999999 862 49999996321 12221111 1257
Q ss_pred EEEEeCCCCCCCCCCCHHHHHHHhccccEEEEcccccCh---hHHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEeCce
Q psy6053 172 VLPISGDAEADELAIKESDRQLLASEVDIMIHGAATIRF---DEALKKAVLLNTRGTKMMLSLAKEMKHLELFVHISTAY 248 (614)
Q Consensus 172 v~~v~gDl~~~~lGLs~~~~~~l~~~vd~ViH~AA~v~~---~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vST~~ 248 (614)
+.++.||+++++ .+..+++++|+|||+||.... .......+++|+.||.+++++|.+. ++++||++||..
T Consensus 72 v~~~~~Dl~d~~------~l~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~-~v~~~V~~SS~~ 144 (344)
T 2gn4_A 72 MRFFIGDVRDLE------RLNYALEGVDICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKN-AISQVIALSTDK 144 (344)
T ss_dssp EEEEECCTTCHH------HHHHHTTTCSEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHT-TCSEEEEECCGG
T ss_pred EEEEECCCCCHH------HHHHHHhcCCEEEECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhC-CCCEEEEecCCc
Confidence 899999999865 788999999999999998753 2334578999999999999999995 899999999975
Q ss_pred eccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCCEEEeecc
Q psy6053 249 CHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMPCLMLRPS 324 (614)
Q Consensus 249 ~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp~~IvRp~ 324 (614)
+.. | .+.|+.||+.+|.++..+.. .|++++++|||
T Consensus 145 ~~~------------p-----------------------------~~~Y~~sK~~~E~~~~~~~~~~~~~g~~~~~vRpg 183 (344)
T 2gn4_A 145 AAN------------P-----------------------------INLYGATKLCSDKLFVSANNFKGSSQTQFSVVRYG 183 (344)
T ss_dssp GSS------------C-----------------------------CSHHHHHHHHHHHHHHHGGGCCCSSCCEEEEECCC
T ss_pred cCC------------C-----------------------------ccHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEEec
Confidence 421 1 17899999999999998874 47999999999
Q ss_pred eeecccCCCCccccCCCCchHHHHHHHhcCc-eeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEeccCC
Q psy6053 325 IIIPVWREPLPGWTDNINGPTGLLIGAGKGV-IRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLTSSQ 403 (614)
Q Consensus 325 ~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~-~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~~~~ 403 (614)
+|+|+... ....+...+..|. ...+ .+++..+++++++|+|++++.++.+.. .+++||++++
T Consensus 184 ~v~g~~~~----------~i~~~~~~~~~g~~~~~i-~~~~~~r~~i~v~D~a~~v~~~l~~~~-----~g~~~~~~~~- 246 (344)
T 2gn4_A 184 NVVGSRGS----------VVPFFKKLVQNKASEIPI-TDIRMTRFWITLDEGVSFVLKSLKRMH-----GGEIFVPKIP- 246 (344)
T ss_dssp EETTCTTS----------HHHHHHHHHHHTCCCEEE-SCTTCEEEEECHHHHHHHHHHHHHHCC-----SSCEEEECCC-
T ss_pred cEECCCCC----------HHHHHHHHHHcCCCceEE-eCCCeEEeeEEHHHHHHHHHHHHhhcc-----CCCEEecCCC-
Confidence 99997531 1112344455565 3333 467788899999999999999987642 5779998765
Q ss_pred cccccHHHHHHHHhhhccc
Q psy6053 404 EWQVSWQEIIDIGKSIVTT 422 (614)
Q Consensus 404 ~~~it~~e~~~~~~~~~g~ 422 (614)
++++.|+++.+.+.++.
T Consensus 247 --~~s~~el~~~i~~~~~~ 263 (344)
T 2gn4_A 247 --SMKMTDLAKALAPNTPT 263 (344)
T ss_dssp --EEEHHHHHHHHCTTCCE
T ss_pred --cEEHHHHHHHHHHhCCe
Confidence 59999999999876443
No 62
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=99.96 E-value=3.2e-28 Score=269.67 Aligned_cols=234 Identities=17% Similarity=0.132 Sum_probs=174.5
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCCC
Q psy6053 102 GKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAEA 181 (614)
Q Consensus 102 ~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~~ 181 (614)
+|+|||||||||||++|++.|++.|++ |++++|+.... ..+.+|+.+
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~~---V~~l~R~~~~~------------------------------~~v~~d~~~ 193 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGHE---VIQLVRKEPKP------------------------------GKRFWDPLN 193 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCE---EEEEESSSCCT------------------------------TCEECCTTS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEECCCCCc------------------------------cceeecccc
Confidence 689999999999999999999999876 99999986531 125678765
Q ss_pred CCCCCCHHHHHHHhccccEEEEcccccCh----hHHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEeCceecc-CC--c
Q psy6053 182 DELAIKESDRQLLASEVDIMIHGAATIRF----DEALKKAVLLNTRGTKMMLSLAKEMKHLELFVHISTAYCHL-QE--K 254 (614)
Q Consensus 182 ~~lGLs~~~~~~l~~~vd~ViH~AA~v~~----~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vST~~~~~-~~--~ 254 (614)
. ...+++++|+|||+||.... .......+++|+.||.+++++|.+..++++|||+||.++++ .. .
T Consensus 194 ~--------~~~~l~~~D~Vih~A~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS~~vyg~~~~~~ 265 (516)
T 3oh8_A 194 P--------ASDLLDGADVLVHLAGEPIFGRFNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISASAVGFYGHDRGDE 265 (516)
T ss_dssp C--------CTTTTTTCSEEEECCCC-----CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEEEGGGGCSEEEEE
T ss_pred h--------hHHhcCCCCEEEECCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcceEecCCCCCC
Confidence 3 23456799999999998632 23456788999999999999944436889999999998876 22 2
Q ss_pred ccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhhCCCCEEEeecceeecccCCCC
Q psy6053 255 VLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMNNGMPCLMLRPSIIIPVWREPL 334 (614)
Q Consensus 255 ~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~~glp~~IvRp~~I~g~~~~p~ 334 (614)
+++|+... | .+.|+.+|..+|.++......|++++|+||+.|||+..
T Consensus 266 ~~~E~~~~-~-----------------------------~~~y~~~~~~~E~~~~~~~~~gi~~~ilRp~~v~Gp~~--- 312 (516)
T 3oh8_A 266 ILTEESES-G-----------------------------DDFLAEVCRDWEHATAPASDAGKRVAFIRTGVALSGRG--- 312 (516)
T ss_dssp EECTTSCC-C-----------------------------SSHHHHHHHHHHHTTHHHHHTTCEEEEEEECEEEBTTB---
T ss_pred ccCCCCCC-C-----------------------------cChHHHHHHHHHHHHHHHHhCCCCEEEEEeeEEECCCC---
Confidence 55665322 1 26799999999988876655799999999999999852
Q ss_pred ccccCCCCchHHHHHH-HhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEeccCCcccccHHHHH
Q psy6053 335 PGWTDNINGPTGLLIG-AGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLTSSQEWQVSWQEII 413 (614)
Q Consensus 335 ~gw~d~~~g~~~~~~~-~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~~~~~~~it~~e~~ 413 (614)
+....+.. +..|.. ..++++++.+++|+++|+|++++.++.+.. ..++||++++ +++|+.|++
T Consensus 313 --------~~~~~~~~~~~~g~~-~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~-----~~g~~ni~~~--~~~s~~el~ 376 (516)
T 3oh8_A 313 --------GMLPLLKTLFSTGLG-GKFGDGTSWFSWIAIDDLTDIYYRAIVDAQ-----ISGPINAVAP--NPVSNADMT 376 (516)
T ss_dssp --------SHHHHHHHTTC---C-CCCTTSCCEECEEEHHHHHHHHHHHHHCTT-----CCEEEEESCS--CCEEHHHHH
T ss_pred --------ChHHHHHHHHHhCCC-cccCCCCceEceEeHHHHHHHHHHHHhCcc-----cCCcEEEECC--CCCCHHHHH
Confidence 22222222 233332 356788999999999999999999997654 4569999999 899999999
Q ss_pred HHHhhhcccccC
Q psy6053 414 DIGKSIVTTEVP 425 (614)
Q Consensus 414 ~~~~~~~g~~~p 425 (614)
+.+.+.+|.+.+
T Consensus 377 ~~i~~~~g~~~~ 388 (516)
T 3oh8_A 377 KILATSMHRPAF 388 (516)
T ss_dssp HHTTC-------
T ss_pred HHHHHHhCCCCC
Confidence 999999887643
No 63
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=99.96 E-value=1.4e-28 Score=242.57 Aligned_cols=222 Identities=14% Similarity=0.085 Sum_probs=165.3
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCCC
Q psy6053 102 GKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAEA 181 (614)
Q Consensus 102 ~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~~ 181 (614)
.|+|||||||||+|++++++|+++|++ |++++|+..... . ...+++++.+|+++
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~g~~---V~~~~r~~~~~~----------------------~-~~~~~~~~~~Dl~d 57 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNRGFE---VTAVVRHPEKIK----------------------I-ENEHLKVKKADVSS 57 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTTTCE---EEEECSCGGGCC----------------------C-CCTTEEEECCCTTC
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCE---EEEEEcCcccch----------------------h-ccCceEEEEecCCC
Confidence 479999999999999999999999865 999999754311 1 23679999999998
Q ss_pred CCCCCCHHHHHHHhccccEEEEcccccChhHHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEeCceeccCCc-cccccc
Q psy6053 182 DELAIKESDRQLLASEVDIMIHGAATIRFDEALKKAVLLNTRGTKMMLSLAKEMKHLELFVHISTAYCHLQEK-VLYEKP 260 (614)
Q Consensus 182 ~~lGLs~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vST~~~~~~~~-~i~E~~ 260 (614)
++ ++..+++++|+|||+|+.... ....+++|+.++.+++++|++. ++++|||+||..+..... ...|+.
T Consensus 58 ~~------~~~~~~~~~d~vi~~a~~~~~---~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~Ss~~~~~~~~~~~~~~~ 127 (227)
T 3dhn_A 58 LD------EVCEVCKGADAVISAFNPGWN---NPDIYDETIKVYLTIIDGVKKA-GVNRFLMVGGAGSLFIAPGLRLMDS 127 (227)
T ss_dssp HH------HHHHHHTTCSEEEECCCC---------CCSHHHHHHHHHHHHHHHT-TCSEEEEECCSTTSEEETTEEGGGT
T ss_pred HH------HHHHHhcCCCEEEEeCcCCCC---ChhHHHHHHHHHHHHHHHHHHh-CCCEEEEeCChhhccCCCCCccccC
Confidence 65 899999999999999987522 1236788999999999999994 889999999986543321 222221
Q ss_pred CCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh-CCCCEEEeecceeecccCCCCccccC
Q psy6053 261 YPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN-NGMPCLMLRPSIIIPVWREPLPGWTD 339 (614)
Q Consensus 261 ~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~-~glp~~IvRp~~I~g~~~~p~~gw~d 339 (614)
...| .+.|+.+|+.+|.+++.... .|++++++||+.|||+...+ +
T Consensus 128 ~~~p-----------------------------~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~--~--- 173 (227)
T 3dhn_A 128 GEVP-----------------------------ENILPGVKALGEFYLNFLMKEKEIDWVFFSPAADMRPGVRT--G--- 173 (227)
T ss_dssp TCSC-----------------------------GGGHHHHHHHHHHHHHTGGGCCSSEEEEEECCSEEESCCCC--C---
T ss_pred Ccch-----------------------------HHHHHHHHHHHHHHHHHHhhccCccEEEEeCCcccCCCccc--c---
Confidence 1111 26899999999999988884 79999999999999986532 1
Q ss_pred CCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEeccCCcccccHHH
Q psy6053 340 NINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLTSSQEWQVSWQE 411 (614)
Q Consensus 340 ~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~~~~~~~it~~e 411 (614)
.. ..+....+. .++. .++++++|+|++++.++.++.. .+++||++++ ++.+|++
T Consensus 174 -~~---------~~~~~~~~~-~~~~-~~~i~~~Dva~ai~~~l~~~~~----~g~~~~~~~~--~~~~~~~ 227 (227)
T 3dhn_A 174 -RY---------RLGKDDMIV-DIVG-NSHISVEDYAAAMIDELEHPKH----HQERFTIGYL--EHHHHHH 227 (227)
T ss_dssp -CC---------EEESSBCCC-CTTS-CCEEEHHHHHHHHHHHHHSCCC----CSEEEEEECC--SCCC---
T ss_pred -ce---------eecCCCccc-CCCC-CcEEeHHHHHHHHHHHHhCccc----cCcEEEEEee--hhcccCC
Confidence 00 011111111 1222 8999999999999999988764 7899999999 7888763
No 64
>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*
Probab=99.96 E-value=4.2e-28 Score=256.12 Aligned_cols=251 Identities=14% Similarity=0.125 Sum_probs=187.3
Q ss_pred CcEEEEecccccccHHHHHHHHhhCC--CccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 102 GKTLFMTGASGFLGKVLLEKILRKSP--NVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 102 ~~~VLITGaTGFlG~~Ll~~Ll~~g~--~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
+|+|||||||||||++|+++|+++|. .+.+|++++|...... . ...+++++.+|+
T Consensus 1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~----------------------~-~~~~~~~~~~Dl 57 (364)
T 2v6g_A 1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW----------------------H-EDNPINYVQCDI 57 (364)
T ss_dssp CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC----------------------C-CSSCCEEEECCT
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc----------------------c-ccCceEEEEeec
Confidence 57999999999999999999999981 1124999999865421 0 225688999999
Q ss_pred CCCCCCCCHHHHHHHhcc---ccEEEEcccccChhHHHHHHHHHhHHHHHHHHHHHHHc-CCCceEE-------EEeCce
Q psy6053 180 EADELAIKESDRQLLASE---VDIMIHGAATIRFDEALKKAVLLNTRGTKMMLSLAKEM-KHLELFV-------HISTAY 248 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~~---vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~-~~~k~~V-------~vST~~ 248 (614)
++++ ++.+++++ +|+|||+||... .+.....++|+.||.+++++|++. +++++|| |+||.+
T Consensus 58 ~d~~------~~~~~~~~~~~~d~vih~a~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~~ 129 (364)
T 2v6g_A 58 SDPD------DSQAKLSPLTDVTHVFYVTWANR--STEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPFE 129 (364)
T ss_dssp TSHH------HHHHHHTTCTTCCEEEECCCCCC--SSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCCGG
T ss_pred CCHH------HHHHHHhcCCCCCEEEECCCCCc--chHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceEEEechh
Confidence 9865 78888888 999999999864 345678899999999999999984 2689998 799987
Q ss_pred eccCC----cccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh-CC-CCEEEee
Q psy6053 249 CHLQE----KVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN-NG-MPCLMLR 322 (614)
Q Consensus 249 ~~~~~----~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~-~g-lp~~IvR 322 (614)
+++.. .+++|+....| .++.| +.+|+++.++.+ .+ ++++|+|
T Consensus 130 vyg~~~~~~~~~~E~~~~~~----------------------------~~~~y----~~~E~~~~~~~~~~~~~~~~ilR 177 (364)
T 2v6g_A 130 SYGKIESHDPPYTEDLPRLK----------------------------YMNFY----YDLEDIMLEEVEKKEGLTWSVHR 177 (364)
T ss_dssp GTTTSCCCCSSBCTTSCCCS----------------------------SCCHH----HHHHHHHHHHHTTSTTCEEEEEE
T ss_pred hccccccCCCCCCccccCCc----------------------------cchhh----HHHHHHHHHHhhcCCCceEEEEC
Confidence 77653 24555532211 13567 458999988876 56 9999999
Q ss_pred cceeecccCCCCccccCCCCchHHHHHHH--hcCceeeEeeCC---CccccceeHHHHHHHHHHHHHhhhhcCCCCccEE
Q psy6053 323 PSIIIPVWREPLPGWTDNINGPTGLLIGA--GKGVIRTMFCDN---TGYADFLPVDITINGIFVAIWAYLSQKEHRQSIV 397 (614)
Q Consensus 323 p~~I~g~~~~p~~gw~d~~~g~~~~~~~~--~~g~~~~~~~~~---~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vy 397 (614)
|+.|||+...+.. +...+..++..+ ..|....+++++ ....++++|||+|++++.++.++.. .+++|
T Consensus 178 p~~v~G~~~~~~~----~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~v~Dva~a~~~~~~~~~~----~g~~~ 249 (364)
T 2v6g_A 178 PGNIFGFSPYSMM----NLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDCSDADLIAEHHIWAAVDPYA----KNEAF 249 (364)
T ss_dssp ESSEECCCTTCSS----CHHHHHHHHHHHHHHHTCCBCCCSCHHHHHSCBCCEEHHHHHHHHHHHHHCGGG----TTEEE
T ss_pred CCceeCCCCCccc----chHHHHHHHHHHHHhcCCceecCCCcccccccCCCCcHHHHHHHHHHHHhCCCC----CCceE
Confidence 9999998764211 100111123333 246544456666 3457889999999999999986542 57799
Q ss_pred EeccCCcccccHHHHHHHHhhhcccccC
Q psy6053 398 HLTSSQEWQVSWQEIIDIGKSIVTTEVP 425 (614)
Q Consensus 398 ni~~~~~~~it~~e~~~~~~~~~g~~~p 425 (614)
|++++ +++|+.|+++.+.+.+|.+.+
T Consensus 250 ni~~~--~~~s~~e~~~~i~~~~g~~~~ 275 (364)
T 2v6g_A 250 NVSNG--DVFKWKHFWKVLAEQFGVECG 275 (364)
T ss_dssp EECCS--CCBCHHHHHHHHHHHHTCCBC
T ss_pred EecCC--CcCCHHHHHHHHHHHhCCCCC
Confidence 99998 789999999999999887644
No 65
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=99.95 E-value=7.9e-27 Score=250.19 Aligned_cols=250 Identities=13% Similarity=0.103 Sum_probs=189.7
Q ss_pred ccccccCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEE
Q psy6053 95 RIGETFTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLP 174 (614)
Q Consensus 95 ~i~~~~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~ 174 (614)
.+...+++|+|||||||||+|++|+++|++.|+. +|+++.|+... ..+..++ ++...+. ...++.+
T Consensus 28 ~~~~~~~~k~vLVTGatG~IG~~l~~~L~~~g~~--~V~~~~r~~~~--~~~~~~~---------l~~~~~~-~~~~v~~ 93 (399)
T 3nzo_A 28 ELQSVVSQSRFLVLGGAGSIGQAVTKEIFKRNPQ--KLHVVDISENN--MVELVRD---------IRSSFGY-INGDFQT 93 (399)
T ss_dssp HHHHHHHTCEEEEETTTSHHHHHHHHHHHTTCCS--EEEEECSCHHH--HHHHHHH---------HHHHTCC-CSSEEEE
T ss_pred HHHHHhCCCEEEEEcCChHHHHHHHHHHHHCCCC--EEEEEECCcch--HHHHHHH---------HHHhcCC-CCCcEEE
Confidence 4555677899999999999999999999999853 59999996422 1111111 1222222 2368999
Q ss_pred EeCCCCCCCCCCCHHHHHHHh--ccccEEEEcccccChh-----HHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEeCc
Q psy6053 175 ISGDAEADELAIKESDRQLLA--SEVDIMIHGAATIRFD-----EALKKAVLLNTRGTKMMLSLAKEMKHLELFVHISTA 247 (614)
Q Consensus 175 v~gDl~~~~lGLs~~~~~~l~--~~vd~ViH~AA~v~~~-----~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vST~ 247 (614)
+.||+++++ ....+. .++|+|||+||..+.. ..+...+++|+.||.+++++|++. ++++||++||.
T Consensus 94 ~~~Dl~d~~------~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~-gv~r~V~iSS~ 166 (399)
T 3nzo_A 94 FALDIGSIE------YDAFIKADGQYDYVLNLSALKHVRSEKDPFTLMRMIDVNVFNTDKTIQQSIDA-GAKKYFCVSTD 166 (399)
T ss_dssp ECCCTTSHH------HHHHHHHCCCCSEEEECCCCCCGGGGSSHHHHHHHHHHHTHHHHHHHHHHHHT-TCSEEEEECCS
T ss_pred EEEeCCCHH------HHHHHHHhCCCCEEEECCCcCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEeCC
Confidence 999999975 455555 4899999999976541 123578999999999999999995 88999999995
Q ss_pred eeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhhCCCCEEEeecceee
Q psy6053 248 YCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMNNGMPCLMLRPSIII 327 (614)
Q Consensus 248 ~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~~glp~~IvRp~~I~ 327 (614)
... .| .+.|+.||+.+|.+++.+.. .++++++|||+|+
T Consensus 167 ~~~------------~p-----------------------------~~~Yg~sK~~~E~~~~~~~~-~~~~~~vR~g~v~ 204 (399)
T 3nzo_A 167 KAA------------NP-----------------------------VNMMGASKRIMEMFLMRKSE-EIAISTARFANVA 204 (399)
T ss_dssp CSS------------CC-----------------------------CSHHHHHHHHHHHHHHHHTT-TSEEEEECCCEET
T ss_pred CCC------------CC-----------------------------cCHHHHHHHHHHHHHHHHhh-hCCEEEeccceee
Confidence 321 01 27899999999999999887 4999999999999
Q ss_pred cccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEeccCCc-cc
Q psy6053 328 PVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLTSSQE-WQ 406 (614)
Q Consensus 328 g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~~~~~-~~ 406 (614)
|+.. .....++..+..|.....+ ++..+++++++|+|++++.++.... .+++|++..+.. +.
T Consensus 205 G~~~----------~~i~~~~~~i~~g~~~~~~--gd~~r~~v~v~D~a~~~~~a~~~~~-----~g~i~~l~~g~~~~~ 267 (399)
T 3nzo_A 205 FSDG----------SLLHGFNQRIQKNQPIVAP--NDIKRYFVTPQESGELCLMSCIFGE-----NRDIFFPKLSEALHL 267 (399)
T ss_dssp TCTT----------SHHHHHHHHHHTTCCEEEE--SSCEECEECHHHHHHHHHHHHHHCC-----TTEEEEECCCTTCCC
T ss_pred CCCC----------chHHHHHHHHHhCCCEecC--CCCeeccCCHHHHHHHHHHHhccCC-----CCCEEEecCCCCCCc
Confidence 9753 1223455666677655443 5678899999999999999987643 578998887722 23
Q ss_pred ccHHHHHHHHhhhccccc
Q psy6053 407 VSWQEIIDIGKSIVTTEV 424 (614)
Q Consensus 407 it~~e~~~~~~~~~g~~~ 424 (614)
+|+.|+++.+.+.+|.+.
T Consensus 268 ~s~~ela~~l~~~~G~~~ 285 (399)
T 3nzo_A 268 ISFADIAVKYLKQLGYEP 285 (399)
T ss_dssp EEHHHHHHHHHHHTTCEE
T ss_pred ccHHHHHHHHHHHhCCCc
Confidence 999999999999989753
No 66
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=99.95 E-value=6.2e-28 Score=255.95 Aligned_cols=220 Identities=20% Similarity=0.200 Sum_probs=176.7
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCCCC
Q psy6053 103 KTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAEAD 182 (614)
Q Consensus 103 ~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~~~ 182 (614)
|+|||||||||+|++|+++|+++|+- +|++++|. +
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~g~~--~v~~~d~~-----------------------------------------~-- 35 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTSTTDH--HIFEVHRQ-----------------------------------------T-- 35 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCC--EEEECCTT-----------------------------------------C--
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCC--EEEEECCC-----------------------------------------C--
Confidence 68999999999999999999999861 26655552 1
Q ss_pred CCCCCHHHHHHHhccccEEEEcccccChhHHHHHHHHHhHHHHHHHHHHHHHcCCCc-eEEEEeCceeccCCcccccccC
Q psy6053 183 ELAIKESDRQLLASEVDIMIHGAATIRFDEALKKAVLLNTRGTKMMLSLAKEMKHLE-LFVHISTAYCHLQEKVLYEKPY 261 (614)
Q Consensus 183 ~lGLs~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k-~~V~vST~~~~~~~~~i~E~~~ 261 (614)
+.+++..+++++|+|||+||..+.. ......++|+.++.+++++|++. +++ +|||+||.++++
T Consensus 36 ----d~~~l~~~~~~~d~Vih~a~~~~~~-~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~v~~Ss~~~~~---------- 99 (369)
T 3st7_A 36 ----KEEELESALLKADFIVHLAGVNRPE-HDKEFSLGNVSYLDHVLDILTRN-TKKPAILLSSSIQATQ---------- 99 (369)
T ss_dssp ----CHHHHHHHHHHCSEEEECCCSBCTT-CSTTCSSSCCBHHHHHHHHHTTC-SSCCEEEEEEEGGGGS----------
T ss_pred ----CHHHHHHHhccCCEEEECCcCCCCC-CHHHHHHHHHHHHHHHHHHHHHh-CCCCeEEEeCchhhcC----------
Confidence 2347888888999999999987643 34556789999999999999995 666 999999998754
Q ss_pred CCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh-CCCCEEEeecceeecccCCCCccccCC
Q psy6053 262 PPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN-NGMPCLMLRPSIIIPVWREPLPGWTDN 340 (614)
Q Consensus 262 ~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~-~glp~~IvRp~~I~g~~~~p~~gw~d~ 340 (614)
++.|+.||+.+|++++++.+ .|++++|+||++|||++..|.
T Consensus 100 --------------------------------~~~Y~~sK~~~E~~~~~~~~~~g~~~~i~R~~~v~G~~~~~~------ 141 (369)
T 3st7_A 100 --------------------------------DNPYGESKLQGEQLLREYAEEYGNTVYIYRWPNLFGKWCKPN------ 141 (369)
T ss_dssp --------------------------------CSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTT------
T ss_pred --------------------------------CCCchHHHHHHHHHHHHHHHHhCCCEEEEECCceeCCCCCCC------
Confidence 17899999999999999776 589999999999999987652
Q ss_pred CCchH-HHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEeccCCcccccHHHHHHHHhhh
Q psy6053 341 INGPT-GLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLTSSQEWQVSWQEIIDIGKSI 419 (614)
Q Consensus 341 ~~g~~-~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~~~~~~~it~~e~~~~~~~~ 419 (614)
..+.. .++..+..|.... .++++..++++|+||+|++++.++..+.. ..+++||++++ +++|+.|+++.+.+.
T Consensus 142 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~v~Dva~~~~~~l~~~~~---~~~~~~~i~~~--~~~s~~e~~~~~~~~ 215 (369)
T 3st7_A 142 YNSVIATFCYKIARNEEIQ-VNDRNVELTLNYVDDIVAEIKRAIEGTPT---IENGVPTVPNV--FKVTLGEIVDLLYKF 215 (369)
T ss_dssp SSCHHHHHHHHHHTTCCCC-CSCTTCEEEEEEHHHHHHHHHHHHHTCCC---EETTEECCSCC--EEEEHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHcCCCeE-ecCCCeEEEEEEHHHHHHHHHHHHhCCcc---cCCceEEeCCC--CceeHHHHHHHHHHH
Confidence 23333 3444555555433 35788999999999999999999987642 12789999998 899999999999999
Q ss_pred cccccCCC
Q psy6053 420 VTTEVPLN 427 (614)
Q Consensus 420 ~g~~~p~~ 427 (614)
+|.+.+..
T Consensus 216 ~g~~~~~~ 223 (369)
T 3st7_A 216 KQSRLDRT 223 (369)
T ss_dssp HHHHHHTC
T ss_pred hCCCcccc
Confidence 88865443
No 67
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=99.95 E-value=8.5e-27 Score=237.70 Aligned_cols=215 Identities=13% Similarity=0.101 Sum_probs=165.5
Q ss_pred EEEEecccccccHHHHHHHHhh--CCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCCC
Q psy6053 104 TLFMTGASGFLGKVLLEKILRK--SPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAEA 181 (614)
Q Consensus 104 ~VLITGaTGFlG~~Ll~~Ll~~--g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~~ 181 (614)
+|||||||||+|++++++|++. |++ |++++|+..... .+ ...+++++.+|+++
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~---V~~~~r~~~~~~---~~-------------------~~~~~~~~~~D~~d 55 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQ---IVAIVRNPAKAQ---AL-------------------AAQGITVRQADYGD 55 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGG---EEEEESCTTTCH---HH-------------------HHTTCEEEECCTTC
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCce---EEEEEcChHhhh---hh-------------------hcCCCeEEEcCCCC
Confidence 4899999999999999999998 766 899999764321 11 11357889999998
Q ss_pred CCCCCCHHHHHHHhccccEEEEcccccChhHHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEeCceeccCCcccccccC
Q psy6053 182 DELAIKESDRQLLASEVDIMIHGAATIRFDEALKKAVLLNTRGTKMMLSLAKEMKHLELFVHISTAYCHLQEKVLYEKPY 261 (614)
Q Consensus 182 ~~lGLs~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vST~~~~~~~~~i~E~~~ 261 (614)
++ ++..+++++|+|||+|+... ..|+.++++++++|++. ++++|||+||.+++.
T Consensus 56 ~~------~~~~~~~~~d~vi~~a~~~~---------~~~~~~~~~l~~a~~~~-~~~~~v~~Ss~~~~~---------- 109 (286)
T 2zcu_A 56 EA------ALTSALQGVEKLLLISSSEV---------GQRAPQHRNVINAAKAA-GVKFIAYTSLLHADT---------- 109 (286)
T ss_dssp HH------HHHHHTTTCSEEEECC-----------------CHHHHHHHHHHHH-TCCEEEEEEETTTTT----------
T ss_pred HH------HHHHHHhCCCEEEEeCCCCc---------hHHHHHHHHHHHHHHHc-CCCEEEEECCCCCCC----------
Confidence 65 89999999999999998521 25899999999999995 899999999987641
Q ss_pred CCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhhCCCCEEEeecceeecccCCCCccccCCC
Q psy6053 262 PPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMNNGMPCLMLRPSIIIPVWREPLPGWTDNI 341 (614)
Q Consensus 262 ~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~~glp~~IvRp~~I~g~~~~p~~gw~d~~ 341 (614)
. |..|+.+|..+|+++++. |++++++||+.++++..
T Consensus 110 -~------------------------------~~~y~~sK~~~e~~~~~~---~~~~~ilrp~~~~~~~~---------- 145 (286)
T 2zcu_A 110 -S------------------------------PLGLADEHIETEKMLADS---GIVYTLLRNGWYSENYL---------- 145 (286)
T ss_dssp -C------------------------------CSTTHHHHHHHHHHHHHH---CSEEEEEEECCBHHHHH----------
T ss_pred -C------------------------------cchhHHHHHHHHHHHHHc---CCCeEEEeChHHhhhhH----------
Confidence 0 257999999999999874 89999999987765421
Q ss_pred CchHHHHHHH-hcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEeccCCcccccHHHHHHHHhhhc
Q psy6053 342 NGPTGLLIGA-GKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLTSSQEWQVSWQEIIDIGKSIV 420 (614)
Q Consensus 342 ~g~~~~~~~~-~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~~~~~~~it~~e~~~~~~~~~ 420 (614)
..+... ..|... .++++...++++++|+|++++.++.++.. .+++||++++ +++|+.|+++.+.+.+
T Consensus 146 ----~~~~~~~~~~~~~--~~~~~~~~~~i~~~Dva~~~~~~~~~~~~----~g~~~~i~~~--~~~s~~e~~~~i~~~~ 213 (286)
T 2zcu_A 146 ----ASAPAALEHGVFI--GAAGDGKIASATRADYAAAAARVISEAGH----EGKVYELAGD--SAWTLTQLAAELTKQS 213 (286)
T ss_dssp ----TTHHHHHHHTEEE--ESCTTCCBCCBCHHHHHHHHHHHHHSSSC----TTCEEEECCS--SCBCHHHHHHHHHHHH
T ss_pred ----HHhHHhhcCCcee--ccCCCCccccccHHHHHHHHHHHhcCCCC----CCceEEEeCC--CcCCHHHHHHHHHHHH
Confidence 011122 234332 45678889999999999999999876432 5789999988 7899999999999998
Q ss_pred ccccC
Q psy6053 421 TTEVP 425 (614)
Q Consensus 421 g~~~p 425 (614)
|.+.+
T Consensus 214 g~~~~ 218 (286)
T 2zcu_A 214 GKQVT 218 (286)
T ss_dssp SSCCE
T ss_pred CCCCc
Confidence 87644
No 68
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=99.94 E-value=5.8e-27 Score=237.37 Aligned_cols=220 Identities=15% Similarity=0.126 Sum_probs=174.5
Q ss_pred CCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCC
Q psy6053 101 TGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAE 180 (614)
Q Consensus 101 ~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~ 180 (614)
++|+|||||||||||++|+++|++.|++ |+++.|..... ...+++++.+|++
T Consensus 2 ~~k~vlVTGasg~IG~~la~~L~~~G~~---V~~~~r~~~~~-------------------------~~~~~~~~~~Dl~ 53 (267)
T 3rft_A 2 AMKRLLVTGAAGQLGRVMRERLAPMAEI---LRLADLSPLDP-------------------------AGPNEECVQCDLA 53 (267)
T ss_dssp CEEEEEEESTTSHHHHHHHHHTGGGEEE---EEEEESSCCCC-------------------------CCTTEEEEECCTT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhcCCE---EEEEecCCccc-------------------------cCCCCEEEEcCCC
Confidence 4689999999999999999999999865 89999986542 2257899999999
Q ss_pred CCCCCCCHHHHHHHhccccEEEEcccccChhHHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEeCceeccCC---cccc
Q psy6053 181 ADELAIKESDRQLLASEVDIMIHGAATIRFDEALKKAVLLNTRGTKMMLSLAKEMKHLELFVHISTAYCHLQE---KVLY 257 (614)
Q Consensus 181 ~~~lGLs~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vST~~~~~~~---~~i~ 257 (614)
+++ ++..+++++|+|||+||... ..+++..+++|+.||.+++++|++ .+.+++||+||..+++.. ..++
T Consensus 54 d~~------~~~~~~~~~D~vi~~Ag~~~-~~~~~~~~~~N~~g~~~l~~a~~~-~~~~~iv~~SS~~~~g~~~~~~~~~ 125 (267)
T 3rft_A 54 DAN------AVNAMVAGCDGIVHLGGISV-EKPFEQILQGNIIGLYNLYEAARA-HGQPRIVFASSNHTIGYYPQTERLG 125 (267)
T ss_dssp CHH------HHHHHHTTCSEEEECCSCCS-CCCHHHHHHHHTHHHHHHHHHHHH-TTCCEEEEEEEGGGGTTSBTTSCBC
T ss_pred CHH------HHHHHHcCCCEEEECCCCcC-cCCHHHHHHHHHHHHHHHHHHHHH-cCCCEEEEEcchHHhCCCCCCCCCC
Confidence 865 89999999999999999853 456788899999999999999999 488999999999776432 2455
Q ss_pred cccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh-CCCCEEEeecceeecccCCCCcc
Q psy6053 258 EKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN-NGMPCLMLRPSIIIPVWREPLPG 336 (614)
Q Consensus 258 E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~-~glp~~IvRp~~I~g~~~~p~~g 336 (614)
|+....| .+.|+.||+.+|.+++.+.. .|++++++||+.|+|+.
T Consensus 126 e~~~~~~-----------------------------~~~Y~~sK~~~e~~~~~~a~~~g~~~~~vr~~~v~~~~------ 170 (267)
T 3rft_A 126 PDVPARP-----------------------------DGLYGVSKCFGENLARMYFDKFGQETALVRIGSCTPEP------ 170 (267)
T ss_dssp TTSCCCC-----------------------------CSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECBCSSSC------
T ss_pred CCCCCCC-----------------------------CChHHHHHHHHHHHHHHHHHHhCCeEEEEEeecccCCC------
Confidence 5533222 27899999999999988765 69999999999998752
Q ss_pred ccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEeccCCcccccHHHHHHHH
Q psy6053 337 WTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLTSSQEWQVSWQEIIDIG 416 (614)
Q Consensus 337 w~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~~~~~~~it~~e~~~~~ 416 (614)
.+++...++++++|+++++..++..... ...++++.++ ++.+|.++...
T Consensus 171 ------------------------~~~~~~~~~~~~~d~a~~~~~~~~~~~~----~~~~~~~~s~--~~~~~~~~~~~- 219 (267)
T 3rft_A 171 ------------------------NNYRMLSTWFSHDDFVSLIEAVFRAPVL----GCPVVWGASA--NDAGWWDNSHL- 219 (267)
T ss_dssp ------------------------CSTTHHHHBCCHHHHHHHHHHHHHCSCC----CSCEEEECCC--CTTCCBCCGGG-
T ss_pred ------------------------CCCCceeeEEcHHHHHHHHHHHHhCCCC----CceEEEEeCC--CCCCcccChhH-
Confidence 2345567899999999999888876542 4567888877 66777665332
Q ss_pred hhhcccc
Q psy6053 417 KSIVTTE 423 (614)
Q Consensus 417 ~~~~g~~ 423 (614)
+.+|++
T Consensus 220 -~~~g~~ 225 (267)
T 3rft_A 220 -GFLGWK 225 (267)
T ss_dssp -GGGCCC
T ss_pred -HHCCCC
Confidence 344664
No 69
>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}
Probab=99.94 E-value=2.5e-26 Score=232.59 Aligned_cols=225 Identities=21% Similarity=0.202 Sum_probs=173.5
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCCCC
Q psy6053 103 KTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAEAD 182 (614)
Q Consensus 103 ~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~~~ 182 (614)
|+|||||||||+|++++++|++ |++ |++++|.... . .+ +.+|++++
T Consensus 1 m~ilVtGatG~iG~~l~~~L~~-g~~---V~~~~r~~~~--------------------------~-~~---~~~Dl~~~ 46 (273)
T 2ggs_A 1 MRTLITGASGQLGIELSRLLSE-RHE---VIKVYNSSEI--------------------------Q-GG---YKLDLTDF 46 (273)
T ss_dssp CCEEEETTTSHHHHHHHHHHTT-TSC---EEEEESSSCC--------------------------T-TC---EECCTTSH
T ss_pred CEEEEECCCChhHHHHHHHHhc-CCe---EEEecCCCcC--------------------------C-CC---ceeccCCH
Confidence 5799999999999999999995 665 8999997632 1 12 78999986
Q ss_pred CCCCCHHHHHHHhcc--ccEEEEcccccChh---HHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEeCceeccCCc-cc
Q psy6053 183 ELAIKESDRQLLASE--VDIMIHGAATIRFD---EALKKAVLLNTRGTKMMLSLAKEMKHLELFVHISTAYCHLQEK-VL 256 (614)
Q Consensus 183 ~lGLs~~~~~~l~~~--vd~ViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vST~~~~~~~~-~i 256 (614)
+ ++..++++ +|+|||+||..... +.+...+++|+.|+.+++++|++. +. +|||+||.++++... ++
T Consensus 47 ~------~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~-~iv~~SS~~~~~~~~~~~ 118 (273)
T 2ggs_A 47 P------RLEDFIIKKRPDVIINAAAMTDVDKCEIEKEKAYKINAEAVRHIVRAGKVI-DS-YIVHISTDYVFDGEKGNY 118 (273)
T ss_dssp H------HHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TC-EEEEEEEGGGSCSSSCSB
T ss_pred H------HHHHHHHhcCCCEEEECCcccChhhhhhCHHHHHHHhHHHHHHHHHHHHHh-CC-eEEEEecceeEcCCCCCc
Confidence 5 78888876 99999999987653 456778999999999999999984 55 899999998775433 45
Q ss_pred ccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhhCCCCEEEeecceeecccCCCCcc
Q psy6053 257 YEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMNNGMPCLMLRPSIIIPVWREPLPG 336 (614)
Q Consensus 257 ~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~~glp~~IvRp~~I~g~~~~p~~g 336 (614)
+|+..+.| .+.|+.||+.+|++++. ++++++||+.|||+ .
T Consensus 119 ~e~~~~~~-----------------------------~~~Y~~sK~~~e~~~~~-----~~~~~iR~~~v~G~--~---- 158 (273)
T 2ggs_A 119 KEEDIPNP-----------------------------INYYGLSKLLGETFALQ-----DDSLIIRTSGIFRN--K---- 158 (273)
T ss_dssp CTTSCCCC-----------------------------SSHHHHHHHHHHHHHCC-----TTCEEEEECCCBSS--S----
T ss_pred CCCCCCCC-----------------------------CCHHHHHHHHHHHHHhC-----CCeEEEeccccccc--c----
Confidence 55533222 27899999999999876 67899999999972 1
Q ss_pred ccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEeccCCcccccHHHHHHHH
Q psy6053 337 WTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLTSSQEWQVSWQEIIDIG 416 (614)
Q Consensus 337 w~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~~~~~~~it~~e~~~~~ 416 (614)
+ ....++.....|......++ ..++++++|+|++++.++.+. ..++||+++ +++|+.|+++.+
T Consensus 159 ---~--~~~~~~~~~~~~~~~~~~~~---~~~~~~~~dva~~i~~~~~~~------~~g~~~i~~---~~~s~~e~~~~~ 221 (273)
T 2ggs_A 159 ---G--FPIYVYKTLKEGKTVFAFKG---YYSPISARKLASAILELLELR------KTGIIHVAG---ERISRFELALKI 221 (273)
T ss_dssp ---S--HHHHHHHHHHTTCCEEEESC---EECCCBHHHHHHHHHHHHHHT------CCEEEECCC---CCEEHHHHHHHH
T ss_pred ---H--HHHHHHHHHHcCCCEEeecC---CCCceEHHHHHHHHHHHHhcC------cCCeEEECC---CcccHHHHHHHH
Confidence 1 11223344455554444433 789999999999999998764 245999986 479999999999
Q ss_pred hhhcccccCC
Q psy6053 417 KSIVTTEVPL 426 (614)
Q Consensus 417 ~~~~g~~~p~ 426 (614)
.+.+|.+.+.
T Consensus 222 ~~~~g~~~~~ 231 (273)
T 2ggs_A 222 KEKFNLPGEV 231 (273)
T ss_dssp HHHTTCCSCE
T ss_pred HHHhCCChhh
Confidence 9998887543
No 70
>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}
Probab=99.94 E-value=4.7e-27 Score=237.78 Aligned_cols=219 Identities=17% Similarity=0.118 Sum_probs=173.3
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCCC
Q psy6053 102 GKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAEA 181 (614)
Q Consensus 102 ~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~~ 181 (614)
+|+|||||||||||++|+++|++.|++ |+++.|..... ...++.++.+|+++
T Consensus 2 ~~~ilVtGatG~iG~~l~~~L~~~g~~---V~~~~r~~~~~-------------------------~~~~~~~~~~Dl~d 53 (267)
T 3ay3_A 2 LNRLLVTGAAGGVGSAIRPHLGTLAHE---VRLSDIVDLGA-------------------------AEAHEEIVACDLAD 53 (267)
T ss_dssp EEEEEEESTTSHHHHHHGGGGGGTEEE---EEECCSSCCCC-------------------------CCTTEEECCCCTTC
T ss_pred CceEEEECCCCHHHHHHHHHHHhCCCE---EEEEeCCCccc-------------------------cCCCccEEEccCCC
Confidence 368999999999999999999999855 99999976431 11357889999998
Q ss_pred CCCCCCHHHHHHHhccccEEEEcccccChhHHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEeCceeccCC---ccccc
Q psy6053 182 DELAIKESDRQLLASEVDIMIHGAATIRFDEALKKAVLLNTRGTKMMLSLAKEMKHLELFVHISTAYCHLQE---KVLYE 258 (614)
Q Consensus 182 ~~lGLs~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vST~~~~~~~---~~i~E 258 (614)
++ .+..+++++|+|||+||... ..++...+++|+.|+.+++++|++ .++++|||+||..+++.. .+++|
T Consensus 54 ~~------~~~~~~~~~d~vi~~a~~~~-~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~iv~~SS~~~~~~~~~~~~~~E 125 (267)
T 3ay3_A 54 AQ------AVHDLVKDCDGIIHLGGVSV-ERPWNDILQANIIGAYNLYEAARN-LGKPRIVFASSNHTIGYYPRTTRIDT 125 (267)
T ss_dssp HH------HHHHHHTTCSEEEECCSCCS-CCCHHHHHHHTHHHHHHHHHHHHH-TTCCEEEEEEEGGGSTTSBTTSCBCT
T ss_pred HH------HHHHHHcCCCEEEECCcCCC-CCCHHHHHHHHHHHHHHHHHHHHH-hCCCEEEEeCCHHHhCCCCCCCCCCC
Confidence 65 78899999999999999763 344577889999999999999999 488999999999876542 24566
Q ss_pred ccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh-CCCCEEEeecceeecccCCCCccc
Q psy6053 259 KPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN-NGMPCLMLRPSIIIPVWREPLPGW 337 (614)
Q Consensus 259 ~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~-~glp~~IvRp~~I~g~~~~p~~gw 337 (614)
+..+.| .+.|+.||+.+|++++.+.. .|++++++||+.+|+. |.
T Consensus 126 ~~~~~~-----------------------------~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~~~---~~--- 170 (267)
T 3ay3_A 126 EVPRRP-----------------------------DSLYGLSKCFGEDLASLYYHKFDIETLNIRIGSCFPK---PK--- 170 (267)
T ss_dssp TSCCCC-----------------------------CSHHHHHHHHHHHHHHHHHHTTCCCEEEEEECBCSSS---CC---
T ss_pred CCCCCC-----------------------------CChHHHHHHHHHHHHHHHHHHcCCCEEEEeceeecCC---CC---
Confidence 533222 27899999999999988765 6999999999999842 10
Q ss_pred cCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEeccCCcccccHHHHHHHHh
Q psy6053 338 TDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLTSSQEWQVSWQEIIDIGK 417 (614)
Q Consensus 338 ~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~~~~~~~it~~e~~~~~~ 417 (614)
+++...++++++|+|++++.++..+.. ...+||+.++ .+.+|.++.+.
T Consensus 171 ------------------------~~~~~~~~~~~~dva~~~~~~~~~~~~----~~~~~~~~~~--~~~~~~d~~~~-- 218 (267)
T 3ay3_A 171 ------------------------DARMMATWLSVDDFMRLMKRAFVAPKL----GCTVVYGASA--NTESWWDNDKS-- 218 (267)
T ss_dssp ------------------------SHHHHHHBCCHHHHHHHHHHHHHSSCC----CEEEEEECCS--CSSCCBCCGGG--
T ss_pred ------------------------CCCeeeccccHHHHHHHHHHHHhCCCC----CceeEecCCC--ccccccCHHHH--
Confidence 122356899999999999998876431 3578999887 67888888777
Q ss_pred hhcccc
Q psy6053 418 SIVTTE 423 (614)
Q Consensus 418 ~~~g~~ 423 (614)
+.+|.+
T Consensus 219 ~~lg~~ 224 (267)
T 3ay3_A 219 AFLGWV 224 (267)
T ss_dssp GGGCCC
T ss_pred HHcCCC
Confidence 555765
No 71
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=99.94 E-value=4e-27 Score=231.09 Aligned_cols=209 Identities=15% Similarity=0.192 Sum_probs=165.7
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCCC-
Q psy6053 103 KTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAEA- 181 (614)
Q Consensus 103 ~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~~- 181 (614)
|+|||||||||+|++++++|+++|++ |++++|+..... ...+++++.+|+++
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~g~~---V~~~~R~~~~~~------------------------~~~~~~~~~~D~~d~ 53 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTTDYQ---IYAGARKVEQVP------------------------QYNNVKAVHFDVDWT 53 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTSSCE---EEEEESSGGGSC------------------------CCTTEEEEECCTTSC
T ss_pred CeEEEECCCCHHHHHHHHHHHHCCCE---EEEEECCccchh------------------------hcCCceEEEecccCC
Confidence 58999999999999999999999865 999999854211 22579999999998
Q ss_pred CCCCCCHHHHHHHhccccEEEEcccccChhHHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEeCceeccCCcccccccC
Q psy6053 182 DELAIKESDRQLLASEVDIMIHGAATIRFDEALKKAVLLNTRGTKMMLSLAKEMKHLELFVHISTAYCHLQEKVLYEKPY 261 (614)
Q Consensus 182 ~~lGLs~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vST~~~~~~~~~i~E~~~ 261 (614)
++ ++.++++++|+|||+||... ...+++|+.|+.+++++|++ .++++|||+||.++.... +..|.
T Consensus 54 ~~------~~~~~~~~~d~vi~~ag~~~-----~~~~~~n~~~~~~l~~a~~~-~~~~~iv~~SS~~~~~~~-~~~e~-- 118 (219)
T 3dqp_A 54 PE------EMAKQLHGMDAIINVSGSGG-----KSLLKVDLYGAVKLMQAAEK-AEVKRFILLSTIFSLQPE-KWIGA-- 118 (219)
T ss_dssp HH------HHHTTTTTCSEEEECCCCTT-----SSCCCCCCHHHHHHHHHHHH-TTCCEEEEECCTTTTCGG-GCCSH--
T ss_pred HH------HHHHHHcCCCEEEECCcCCC-----CCcEeEeHHHHHHHHHHHHH-hCCCEEEEECcccccCCC-ccccc--
Confidence 54 88999999999999999865 23678899999999999999 488999999998775432 11110
Q ss_pred CCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhhCCCCEEEeecceeecccCCCCccccCCC
Q psy6053 262 PPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMNNGMPCLMLRPSIIIPVWREPLPGWTDNI 341 (614)
Q Consensus 262 ~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~~glp~~IvRp~~I~g~~~~p~~gw~d~~ 341 (614)
...| .+.|+.+|+.+|++++ ...|++++++||+.++|+...
T Consensus 119 ----------------------~~~~------~~~Y~~sK~~~e~~~~--~~~~i~~~ilrp~~v~g~~~~--------- 159 (219)
T 3dqp_A 119 ----------------------GFDA------LKDYYIAKHFADLYLT--KETNLDYTIIQPGALTEEEAT--------- 159 (219)
T ss_dssp ----------------------HHHH------THHHHHHHHHHHHHHH--HSCCCEEEEEEECSEECSCCC---------
T ss_pred ----------------------cccc------ccHHHHHHHHHHHHHH--hccCCcEEEEeCceEecCCCC---------
Confidence 0111 2689999999999996 224999999999999997432
Q ss_pred CchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEeccCCcccccHHHHHHH
Q psy6053 342 NGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLTSSQEWQVSWQEIIDI 415 (614)
Q Consensus 342 ~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~~~~~~~it~~e~~~~ 415 (614)
|... .++...++++++|+|++++.++.++.. .+++||++++ + .+++|+.+.
T Consensus 160 ------------~~~~----~~~~~~~~i~~~Dva~~i~~~l~~~~~----~g~~~~i~~g--~-~~~~e~~~~ 210 (219)
T 3dqp_A 160 ------------GLID----INDEVSASNTIGDVADTIKELVMTDHS----IGKVISMHNG--K-TAIKEALES 210 (219)
T ss_dssp ------------SEEE----ESSSCCCCEEHHHHHHHHHHHHTCGGG----TTEEEEEEEC--S-EEHHHHHHT
T ss_pred ------------Cccc----cCCCcCCcccHHHHHHHHHHHHhCccc----cCcEEEeCCC--C-ccHHHHHHH
Confidence 1111 136778999999999999999987653 5889999887 4 899888764
No 72
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=99.94 E-value=1.9e-26 Score=242.25 Aligned_cols=237 Identities=16% Similarity=0.126 Sum_probs=175.6
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcC-HHHHHHHHHhChhhHHhhhhccccccCeEEEEeCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKN-ARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGD 178 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~-~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gD 178 (614)
+.+|+|||||||||+|++|++.|++.|++ |++++|+..... ..++++++ ...+++++.||
T Consensus 8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~---V~~l~R~~~~~~~~~~~~~~l----------------~~~~v~~~~~D 68 (346)
T 3i6i_A 8 SPKGRVLIAGATGFIGQFVATASLDAHRP---TYILARPGPRSPSKAKIFKAL----------------EDKGAIIVYGL 68 (346)
T ss_dssp ---CCEEEECTTSHHHHHHHHHHHHTTCC---EEEEECSSCCCHHHHHHHHHH----------------HHTTCEEEECC
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCCCC---EEEEECCCCCChhHHHHHHHH----------------HhCCcEEEEee
Confidence 34678999999999999999999999876 999999874322 12222222 22578999999
Q ss_pred CCCCCCCCCHHHHHHHhc--cccEEEEcccccChhHHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEeCceeccCCccc
Q psy6053 179 AEADELAIKESDRQLLAS--EVDIMIHGAATIRFDEALKKAVLLNTRGTKMMLSLAKEMKHLELFVHISTAYCHLQEKVL 256 (614)
Q Consensus 179 l~~~~lGLs~~~~~~l~~--~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vST~~~~~~~~~i 256 (614)
+++++ ++..+++ ++|+|||+||.. |+.++.+++++|++.+.+++||+ | .++. ..
T Consensus 69 l~d~~------~l~~~~~~~~~d~Vi~~a~~~------------n~~~~~~l~~aa~~~g~v~~~v~-S-~~g~----~~ 124 (346)
T 3i6i_A 69 INEQE------AMEKILKEHEIDIVVSTVGGE------------SILDQIALVKAMKAVGTIKRFLP-S-EFGH----DV 124 (346)
T ss_dssp TTCHH------HHHHHHHHTTCCEEEECCCGG------------GGGGHHHHHHHHHHHCCCSEEEC-S-CCSS----CT
T ss_pred cCCHH------HHHHHHhhCCCCEEEECCchh------------hHHHHHHHHHHHHHcCCceEEee-c-ccCC----CC
Confidence 99865 8999999 999999999973 88999999999999633999986 4 3321 12
Q ss_pred ccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhhCCCCEEEeecceeecccCCCCcc
Q psy6053 257 YEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMNNGMPCLMLRPSIIIPVWREPLPG 336 (614)
Q Consensus 257 ~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~~glp~~IvRp~~I~g~~~~p~~g 336 (614)
+|.....| .+.|+.+|+.+|+++++. |++++++|||.++|......
T Consensus 125 ~e~~~~~p-----------------------------~~~y~~sK~~~e~~l~~~---g~~~tivrpg~~~g~~~~~~-- 170 (346)
T 3i6i_A 125 NRADPVEP-----------------------------GLNMYREKRRVRQLVEES---GIPFTYICCNSIASWPYYNN-- 170 (346)
T ss_dssp TTCCCCTT-----------------------------HHHHHHHHHHHHHHHHHT---TCCBEEEECCEESSCCCSCC--
T ss_pred CccCcCCC-----------------------------cchHHHHHHHHHHHHHHc---CCCEEEEEecccccccCccc--
Confidence 23211111 168999999999999874 89999999999999643211
Q ss_pred ccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEeccCCcccccHHHHHHHH
Q psy6053 337 WTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLTSSQEWQVSWQEIIDIG 416 (614)
Q Consensus 337 w~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~~~~~~~it~~e~~~~~ 416 (614)
..+ ......+....++++++..+++++++|+|++++.++.++.. .+++||++++ .+++|+.|+++.+
T Consensus 171 -----~~~---~~~~~~~~~~~~~g~g~~~~~~i~~~Dva~~~~~~l~~~~~----~~~~~~i~g~-~~~~s~~e~~~~~ 237 (346)
T 3i6i_A 171 -----IHP---SEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMKTVDDVRT----LNKSVHFRPS-CNCLNINELASVW 237 (346)
T ss_dssp -------------CCCCSSCEEEETTSCCCEEEECHHHHHHHHHHHTTCGGG----TTEEEECCCG-GGEECHHHHHHHH
T ss_pred -----ccc---ccccCCCceEEEccCCCceEEecCHHHHHHHHHHHHhCccc----cCeEEEEeCC-CCCCCHHHHHHHH
Confidence 111 00112333345678899999999999999999999987643 5778998742 1789999999999
Q ss_pred hhhcccccCC
Q psy6053 417 KSIVTTEVPL 426 (614)
Q Consensus 417 ~~~~g~~~p~ 426 (614)
.+.+|.+.+.
T Consensus 238 ~~~~g~~~~~ 247 (346)
T 3i6i_A 238 EKKIGRTLPR 247 (346)
T ss_dssp HHHHTSCCCE
T ss_pred HHHHCCCCce
Confidence 9998986544
No 73
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=99.94 E-value=1.5e-26 Score=229.69 Aligned_cols=217 Identities=13% Similarity=0.138 Sum_probs=167.0
Q ss_pred ccCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeE-EEEeC
Q psy6053 99 TFTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKV-LPISG 177 (614)
Q Consensus 99 ~~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v-~~v~g 177 (614)
.+++|+|||||||||+|++++++|+++|++ |++++|+... ++++ ...++ +++.+
T Consensus 18 ~l~~~~ilVtGatG~iG~~l~~~L~~~G~~---V~~~~R~~~~------~~~~----------------~~~~~~~~~~~ 72 (236)
T 3e8x_A 18 YFQGMRVLVVGANGKVARYLLSELKNKGHE---PVAMVRNEEQ------GPEL----------------RERGASDIVVA 72 (236)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESSGGG------HHHH----------------HHTTCSEEEEC
T ss_pred CcCCCeEEEECCCChHHHHHHHHHHhCCCe---EEEEECChHH------HHHH----------------HhCCCceEEEc
Confidence 367899999999999999999999999875 9999997542 1111 11367 89999
Q ss_pred CCCCCCCCCCHHHHHHHhccccEEEEcccccChhHHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEeCceeccCCcccc
Q psy6053 178 DAEADELAIKESDRQLLASEVDIMIHGAATIRFDEALKKAVLLNTRGTKMMLSLAKEMKHLELFVHISTAYCHLQEKVLY 257 (614)
Q Consensus 178 Dl~~~~lGLs~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vST~~~~~~~~~i~ 257 (614)
|++ + ++.+.++++|+|||+||.... ..++..+++|+.|+.+++++|++. ++++||++||..+...
T Consensus 73 Dl~--~------~~~~~~~~~D~vi~~ag~~~~-~~~~~~~~~n~~~~~~l~~a~~~~-~~~~iv~~SS~~~~~~----- 137 (236)
T 3e8x_A 73 NLE--E------DFSHAFASIDAVVFAAGSGPH-TGADKTILIDLWGAIKTIQEAEKR-GIKRFIMVSSVGTVDP----- 137 (236)
T ss_dssp CTT--S------CCGGGGTTCSEEEECCCCCTT-SCHHHHHHTTTHHHHHHHHHHHHH-TCCEEEEECCTTCSCG-----
T ss_pred ccH--H------HHHHHHcCCCEEEECCCCCCC-CCccccchhhHHHHHHHHHHHHHc-CCCEEEEEecCCCCCC-----
Confidence 999 2 466777899999999997653 456778899999999999999995 7899999999644321
Q ss_pred cccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhhCCCCEEEeecceeecccCCCCccc
Q psy6053 258 EKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMNNGMPCLMLRPSIIIPVWREPLPGW 337 (614)
Q Consensus 258 E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~~glp~~IvRp~~I~g~~~~p~~gw 337 (614)
|... ...+.|+.||+.+|+++++. |++++++|||.|+|+...
T Consensus 138 ~~~~------------------------------~~~~~Y~~sK~~~e~~~~~~---gi~~~~lrpg~v~~~~~~----- 179 (236)
T 3e8x_A 138 DQGP------------------------------MNMRHYLVAKRLADDELKRS---SLDYTIVRPGPLSNEEST----- 179 (236)
T ss_dssp GGSC------------------------------GGGHHHHHHHHHHHHHHHHS---SSEEEEEEECSEECSCCC-----
T ss_pred CCCh------------------------------hhhhhHHHHHHHHHHHHHHC---CCCEEEEeCCcccCCCCC-----
Confidence 1100 00268999999999998843 999999999999997432
Q ss_pred cCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEeccCCcccccHHHHHHHHh
Q psy6053 338 TDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLTSSQEWQVSWQEIIDIGK 417 (614)
Q Consensus 338 ~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~~~~~~~it~~e~~~~~~ 417 (614)
+... ...+.+...++++++|+|++++.++.++.. .+++||++++ +.+++|+++.+.
T Consensus 180 ----------------~~~~-~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~----~g~~~~v~~~---~~~~~e~~~~i~ 235 (236)
T 3e8x_A 180 ----------------GKVT-VSPHFSEITRSITRHDVAKVIAELVDQQHT----IGKTFEVLNG---DTPIAKVVEQLG 235 (236)
T ss_dssp ----------------SEEE-EESSCSCCCCCEEHHHHHHHHHHHTTCGGG----TTEEEEEEEC---SEEHHHHHHTC-
T ss_pred ----------------CeEE-eccCCCcccCcEeHHHHHHHHHHHhcCccc----cCCeEEEeCC---CcCHHHHHHHhc
Confidence 1111 223455578999999999999999977643 6889999987 389999988654
No 74
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=99.94 E-value=2.6e-25 Score=227.45 Aligned_cols=218 Identities=14% Similarity=0.119 Sum_probs=166.8
Q ss_pred cEEEEecccccccHHHHHHHHhh-CCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCCC
Q psy6053 103 KTLFMTGASGFLGKVLLEKILRK-SPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAEA 181 (614)
Q Consensus 103 ~~VLITGaTGFlG~~Ll~~Ll~~-g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~~ 181 (614)
|+|||||||||+|++++++|++. |++ |++++|+...... + ...+++++.+|+++
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g~~---V~~~~R~~~~~~~---------------~-------~~~~v~~~~~D~~d 55 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHIDH---FHIGVRNVEKVPD---------------D-------WRGKVSVRQLDYFN 55 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCTT---EEEEESSGGGSCG---------------G-------GBTTBEEEECCTTC
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCCCc---EEEEECCHHHHHH---------------h-------hhCCCEEEEcCCCC
Confidence 57999999999999999999887 776 8999997643210 0 23578999999998
Q ss_pred CCCCCCHHHHHHHhccccEEEEcccccChhHHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEeCceeccCCcccccccC
Q psy6053 182 DELAIKESDRQLLASEVDIMIHGAATIRFDEALKKAVLLNTRGTKMMLSLAKEMKHLELFVHISTAYCHLQEKVLYEKPY 261 (614)
Q Consensus 182 ~~lGLs~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vST~~~~~~~~~i~E~~~ 261 (614)
++ ++..+++++|+|||+|+..... ..|+.++++++++|++ .++++|||+||..... .
T Consensus 56 ~~------~l~~~~~~~d~vi~~a~~~~~~-------~~~~~~~~~l~~aa~~-~gv~~iv~~Ss~~~~~-------~-- 112 (289)
T 3e48_A 56 QE------SMVEAFKGMDTVVFIPSIIHPS-------FKRIPEVENLVYAAKQ-SGVAHIIFIGYYADQH-------N-- 112 (289)
T ss_dssp HH------HHHHHTTTCSEEEECCCCCCSH-------HHHHHHHHHHHHHHHH-TTCCEEEEEEESCCST-------T--
T ss_pred HH------HHHHHHhCCCEEEEeCCCCccc-------hhhHHHHHHHHHHHHH-cCCCEEEEEcccCCCC-------C--
Confidence 65 8999999999999999976533 3489999999999999 4899999999954211 0
Q ss_pred CCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhh--HHHHHHHHHHHhhCCCCEEEeecceeecccCCCCccccC
Q psy6053 262 PPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYT--KCLSEGLVVEAMNNGMPCLMLRPSIIIPVWREPLPGWTD 339 (614)
Q Consensus 262 ~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~S--K~~aE~lv~~~~~~glp~~IvRp~~I~g~~~~p~~gw~d 339 (614)
++|..+ +..+|+.+.+. |++++++|||.++|+..
T Consensus 113 ---------------------------------~~~~~~~~~~~~e~~~~~~---g~~~~ilrp~~~~~~~~-------- 148 (289)
T 3e48_A 113 ---------------------------------NPFHMSPYFGYASRLLSTS---GIDYTYVRMAMYMDPLK-------- 148 (289)
T ss_dssp ---------------------------------CCSTTHHHHHHHHHHHHHH---CCEEEEEEECEESTTHH--------
T ss_pred ---------------------------------CCCccchhHHHHHHHHHHc---CCCEEEEeccccccccH--------
Confidence 122222 33566666654 99999999999988521
Q ss_pred CCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEeccCCcccccHHHHHHHHhhh
Q psy6053 340 NINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLTSSQEWQVSWQEIIDIGKSI 419 (614)
Q Consensus 340 ~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~~~~~~~it~~e~~~~~~~~ 419 (614)
..+.....+.. ...+.++...++++++|+|++++.++.++.. .+++||++ + +++|+.|+++.+.+.
T Consensus 149 ------~~~~~~~~~~~-~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~----~g~~~~~~-~--~~~s~~e~~~~~~~~ 214 (289)
T 3e48_A 149 ------PYLPELMNMHK-LIYPAGDGRINYITRNDIARGVIAIIKNPDT----WGKRYLLS-G--YSYDMKELAAILSEA 214 (289)
T ss_dssp ------HHHHHHHHHTE-ECCCCTTCEEEEECHHHHHHHHHHHHHCGGG----TTCEEEEC-C--EEEEHHHHHHHHHHH
T ss_pred ------HHHHHHHHCCC-EecCCCCceeeeEEHHHHHHHHHHHHcCCCc----CCceEEeC-C--CcCCHHHHHHHHHHH
Confidence 12222222211 2345678899999999999999999987653 47899999 8 899999999999999
Q ss_pred cccccCC
Q psy6053 420 VTTEVPL 426 (614)
Q Consensus 420 ~g~~~p~ 426 (614)
+|.+.+.
T Consensus 215 ~g~~~~~ 221 (289)
T 3e48_A 215 SGTEIKY 221 (289)
T ss_dssp HTSCCEE
T ss_pred HCCceeE
Confidence 9986543
No 75
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=99.92 E-value=4.6e-25 Score=216.66 Aligned_cols=215 Identities=11% Similarity=0.052 Sum_probs=152.6
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCCCC
Q psy6053 103 KTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAEAD 182 (614)
Q Consensus 103 ~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~~~ 182 (614)
|+|||||||||+|++++++|+++|++ |++++|+.. ++.++ ...+++++.+|++++
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~~---V~~~~R~~~------~~~~~----------------~~~~~~~~~~D~~d~ 55 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGHE---VLAVVRDPQ------KAADR----------------LGATVATLVKEPLVL 55 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCHH------HHHHH----------------TCTTSEEEECCGGGC
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCCE---EEEEEeccc------ccccc----------------cCCCceEEecccccc
Confidence 57999999999999999999999875 999999742 22222 225789999999998
Q ss_pred CCCCCHHHHHHHhccccEEEEcccccChhHHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEeCceeccCCc-----ccc
Q psy6053 183 ELAIKESDRQLLASEVDIMIHGAATIRFDEALKKAVLLNTRGTKMMLSLAKEMKHLELFVHISTAYCHLQEK-----VLY 257 (614)
Q Consensus 183 ~lGLs~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vST~~~~~~~~-----~i~ 257 (614)
+ + ..++++|+|||+||..... .....|+.++++++++|++. + +++|++||+.+..... ..+
T Consensus 56 ~------~--~~~~~~d~vi~~ag~~~~~----~~~~~n~~~~~~l~~a~~~~-~-~~~v~~SS~~~~~~~~~~~~~~~~ 121 (224)
T 3h2s_A 56 T------E--ADLDSVDAVVDALSVPWGS----GRGYLHLDFATHLVSLLRNS-D-TLAVFILGSASLAMPGADHPMILD 121 (224)
T ss_dssp C------H--HHHTTCSEEEECCCCCTTS----SCTHHHHHHHHHHHHTCTTC-C-CEEEEECCGGGSBCTTCSSCGGGG
T ss_pred c------H--hhcccCCEEEECCccCCCc----chhhHHHHHHHHHHHHHHHc-C-CcEEEEecceeeccCCCCcccccc
Confidence 7 3 6678999999999986211 12467999999999999995 6 9999999985433221 122
Q ss_pred cccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHh-hCCCCEEEeecceeecccCCCCcc
Q psy6053 258 EKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAM-NNGMPCLMLRPSIIIPVWREPLPG 336 (614)
Q Consensus 258 E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~-~~glp~~IvRp~~I~g~~~~p~~g 336 (614)
|...+. ..+.|+.+|+.+|.+ .... ..+++++++||+.++|+.. ..+
T Consensus 122 ~~~~~~-----------------------------~~~~y~~sK~~~e~~-~~~~~~~~i~~~ivrp~~v~g~~~--~~~ 169 (224)
T 3h2s_A 122 FPESAA-----------------------------SQPWYDGALYQYYEY-QFLQMNANVNWIGISPSEAFPSGP--ATS 169 (224)
T ss_dssp CCGGGG-----------------------------GSTTHHHHHHHHHHH-HHHTTCTTSCEEEEEECSBCCCCC--CCC
T ss_pred CCCCCc-----------------------------cchhhHHHHHHHHHH-HHHHhcCCCcEEEEcCccccCCCc--ccC
Confidence 211111 126899999999965 3343 3699999999999999832 111
Q ss_pred ccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEeccCCcccccHH
Q psy6053 337 WTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLTSSQEWQVSWQ 410 (614)
Q Consensus 337 w~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~~~~~~~it~~ 410 (614)
+.. .... ...+....++++++|+|++++.++.++.. .+++|++++. ++.++.
T Consensus 170 ~~~------------~~~~----~~~~~~~~~~i~~~DvA~~~~~~l~~~~~----~g~~~~~~~~--~~~~~~ 221 (224)
T 3h2s_A 170 YVA------------GKDT----LLVGEDGQSHITTGNMALAILDQLEHPTA----IRDRIVVRDA--DLEHHH 221 (224)
T ss_dssp EEE------------ESSB----CCCCTTSCCBCCHHHHHHHHHHHHHSCCC----TTSEEEEEEC--C-----
T ss_pred cee------------cccc----cccCCCCCceEeHHHHHHHHHHHhcCccc----cCCEEEEecC--cchhcc
Confidence 110 0111 11234557899999999999999987653 6889999987 544443
No 76
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=99.92 E-value=2.9e-25 Score=221.71 Aligned_cols=231 Identities=14% Similarity=0.075 Sum_probs=168.9
Q ss_pred CCcEEEEecccccccHHHHHHHHhh--CCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCC
Q psy6053 101 TGKTLFMTGASGFLGKVLLEKILRK--SPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGD 178 (614)
Q Consensus 101 ~~~~VLITGaTGFlG~~Ll~~Ll~~--g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gD 178 (614)
++|+|||||||||+|++++++|++. |++ |+++.|+.. ++++ ...++.++.+|
T Consensus 3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~---V~~~~r~~~------~~~~-----------------~~~~~~~~~~D 56 (253)
T 1xq6_A 3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFV---AKGLVRSAQ------GKEK-----------------IGGEADVFIGD 56 (253)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHTTTTCE---EEEEESCHH------HHHH-----------------TTCCTTEEECC
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHhcCCCcE---EEEEEcCCC------chhh-----------------cCCCeeEEEec
Confidence 4789999999999999999999999 544 899999631 2211 12356789999
Q ss_pred CCCCCCCCCHHHHHHHhccccEEEEcccccChh----------------HHHHHHHHHhHHHHHHHHHHHHHcCCCceEE
Q psy6053 179 AEADELAIKESDRQLLASEVDIMIHGAATIRFD----------------EALKKAVLLNTRGTKMMLSLAKEMKHLELFV 242 (614)
Q Consensus 179 l~~~~lGLs~~~~~~l~~~vd~ViH~AA~v~~~----------------~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V 242 (614)
+++++ ++.++++++|+|||+||..... +......++|+.++.+++++|++. ++++||
T Consensus 57 ~~d~~------~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~iv 129 (253)
T 1xq6_A 57 ITDAD------SINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA-GVKHIV 129 (253)
T ss_dssp TTSHH------HHHHHHTTCSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH-TCSEEE
T ss_pred CCCHH------HHHHHHcCCCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHc-CCCEEE
Confidence 99865 8999999999999999965321 111245789999999999999995 789999
Q ss_pred EEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhhCCCCEEEee
Q psy6053 243 HISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMNNGMPCLMLR 322 (614)
Q Consensus 243 ~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~~glp~~IvR 322 (614)
++||..+.....+ ..+. ..+.|+.+|+.+|.++++ .|++++++|
T Consensus 130 ~~SS~~~~~~~~~---------~~~~------------------------~~~~y~~sK~~~e~~~~~---~~i~~~~vr 173 (253)
T 1xq6_A 130 VVGSMGGTNPDHP---------LNKL------------------------GNGNILVWKRKAEQYLAD---SGTPYTIIR 173 (253)
T ss_dssp EEEETTTTCTTCG---------GGGG------------------------GGCCHHHHHHHHHHHHHT---SSSCEEEEE
T ss_pred EEcCccCCCCCCc---------cccc------------------------cchhHHHHHHHHHHHHHh---CCCceEEEe
Confidence 9999976421111 0000 014688899999999876 399999999
Q ss_pred cceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEeccC
Q psy6053 323 PSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLTSS 402 (614)
Q Consensus 323 p~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~~~ 402 (614)
||.++|+..... ... .+....+++ ...++++++|+|++++.++.++.. .+++||++++
T Consensus 174 pg~v~~~~~~~~-~~~--------------~~~~~~~~~---~~~~~~~~~Dva~~~~~~~~~~~~----~g~~~~i~~~ 231 (253)
T 1xq6_A 174 AGGLLDKEGGVR-ELL--------------VGKDDELLQ---TDTKTVPRADVAEVCIQALLFEEA----KNKAFDLGSK 231 (253)
T ss_dssp ECEEECSCSSSS-CEE--------------EESTTGGGG---SSCCEEEHHHHHHHHHHHTTCGGG----TTEEEEEEEC
T ss_pred cceeecCCcchh-hhh--------------ccCCcCCcC---CCCcEEcHHHHHHHHHHHHcCccc----cCCEEEecCC
Confidence 999999864210 000 000000111 134689999999999999876542 5789999987
Q ss_pred Cc-ccccHHHHHHHHhhhccc
Q psy6053 403 QE-WQVSWQEIIDIGKSIVTT 422 (614)
Q Consensus 403 ~~-~~it~~e~~~~~~~~~g~ 422 (614)
.. +++++.|+++.+.+.+|+
T Consensus 232 ~~~~~~s~~e~~~~~~~~~g~ 252 (253)
T 1xq6_A 232 PEGTSTPTKDFKALFSQVTSR 252 (253)
T ss_dssp CTTTSCCCCCHHHHHHTCCCC
T ss_pred CcCCCCCHHHHHHHHHHHhCC
Confidence 32 469999999999998775
No 77
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=99.92 E-value=2.4e-24 Score=210.84 Aligned_cols=216 Identities=11% Similarity=0.052 Sum_probs=142.5
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCCCC
Q psy6053 103 KTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAEAD 182 (614)
Q Consensus 103 ~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~~~ 182 (614)
|+|||||||||+|++++++|+++|++ |++++|+.. ++.++ . .+++++.+|++++
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~---V~~~~R~~~------~~~~~----------------~-~~~~~~~~D~~d~ 54 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHE---VTAIVRNAG------KITQT----------------H-KDINILQKDIFDL 54 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCSH------HHHHH----------------C-SSSEEEECCGGGC
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCE---EEEEEcCch------hhhhc----------------c-CCCeEEeccccCh
Confidence 57999999999999999999999865 999999752 12211 2 5689999999998
Q ss_pred CCCCCHHHHHHHhccccEEEEcccccChhHHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEeCceeccCCc---ccccc
Q psy6053 183 ELAIKESDRQLLASEVDIMIHGAATIRFDEALKKAVLLNTRGTKMMLSLAKEMKHLELFVHISTAYCHLQEK---VLYEK 259 (614)
Q Consensus 183 ~lGLs~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vST~~~~~~~~---~i~E~ 259 (614)
+ . +.++++|+|||+||.... ....|+.++++++++|++. +.+++|++||..+..... ...|+
T Consensus 55 ~------~--~~~~~~d~vi~~ag~~~~------~~~~~~~~~~~l~~a~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~ 119 (221)
T 3ew7_A 55 T------L--SDLSDQNVVVDAYGISPD------EAEKHVTSLDHLISVLNGT-VSPRLLVVGGAASLQIDEDGNTLLES 119 (221)
T ss_dssp C------H--HHHTTCSEEEECCCSSTT------TTTSHHHHHHHHHHHHCSC-CSSEEEEECCCC--------------
T ss_pred h------h--hhhcCCCEEEECCcCCcc------ccchHHHHHHHHHHHHHhc-CCceEEEEecceEEEcCCCCcccccc
Confidence 7 3 667899999999998532 2467999999999999994 789999999986543221 12221
Q ss_pred cCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHh-hCCCCEEEeecceeecccCCCCcccc
Q psy6053 260 PYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAM-NNGMPCLMLRPSIIIPVWREPLPGWT 338 (614)
Q Consensus 260 ~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~-~~glp~~IvRp~~I~g~~~~p~~gw~ 338 (614)
..+ ...+.|+.+|..+|.+..-.. ..|++++++||+.++|+.. ..+.
T Consensus 120 ~~~-----------------------------~~~~~y~~~k~~~e~~~~~~~~~~gi~~~ivrp~~v~g~~~--~~~~- 167 (221)
T 3ew7_A 120 KGL-----------------------------REAPYYPTARAQAKQLEHLKSHQAEFSWTYISPSAMFEPGE--RTGD- 167 (221)
T ss_dssp ----------------------------------CCCSCCHHHHHHHHHHHHTTTTTSCEEEEECSSCCCCC--------
T ss_pred CCC-----------------------------CCHHHHHHHHHHHHHHHHHHhhccCccEEEEeCcceecCCC--ccCc-
Confidence 110 012679999999999733332 3599999999999999722 1110
Q ss_pred CCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEeccCCcccccHHH
Q psy6053 339 DNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLTSSQEWQVSWQE 411 (614)
Q Consensus 339 d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~~~~~~~it~~e 411 (614)
+. .. +......+++ .++++++|+|++++.++.++.. .+++||++++ ++.+.+|
T Consensus 168 ---------~~-~~-~~~~~~~~~~---~~~i~~~Dva~~~~~~l~~~~~----~g~~~~~~~~--~~~~~~~ 220 (221)
T 3ew7_A 168 ---------YQ-IG-KDHLLFGSDG---NSFISMEDYAIAVLDEIERPNH----LNEHFTVAGK--LEHHHHH 220 (221)
T ss_dssp ------------------------------CCCHHHHHHHHHHHHHSCSC----TTSEEECCC----------
T ss_pred ---------eE-ec-cccceecCCC---CceEeHHHHHHHHHHHHhCccc----cCCEEEECCC--Ccccccc
Confidence 00 01 1111112222 3689999999999999987653 6899999998 6656544
No 78
>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=99.91 E-value=3.4e-25 Score=216.04 Aligned_cols=208 Identities=15% Similarity=0.092 Sum_probs=158.6
Q ss_pred CCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCC
Q psy6053 101 TGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAE 180 (614)
Q Consensus 101 ~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~ 180 (614)
.+|+|+|||||||+|++++++|+++|+. .+|++++|+... ...+++++.+|++
T Consensus 4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~-~~V~~~~r~~~~--------------------------~~~~~~~~~~D~~ 56 (215)
T 2a35_A 4 TPKRVLLAGATGLTGEHLLDRILSEPTL-AKVIAPARKALA--------------------------EHPRLDNPVGPLA 56 (215)
T ss_dssp CCCEEEEECTTSHHHHHHHHHHHHCTTC-CEEECCBSSCCC--------------------------CCTTEECCBSCHH
T ss_pred CCceEEEECCCcHHHHHHHHHHHhCCCC-CeEEEEeCCCcc--------------------------cCCCceEEecccc
Confidence 3589999999999999999999999861 249999997643 1146788899998
Q ss_pred CCCCCCCHHHHHHHhccccEEEEcccccCh-hHHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEeCceeccCCcccccc
Q psy6053 181 ADELAIKESDRQLLASEVDIMIHGAATIRF-DEALKKAVLLNTRGTKMMLSLAKEMKHLELFVHISTAYCHLQEKVLYEK 259 (614)
Q Consensus 181 ~~~lGLs~~~~~~l~~~vd~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vST~~~~~~~~~i~E~ 259 (614)
+++ ++.+++ +|+|||+|+.... ..+.+..+++|+.++.+++++|++. ++++|||+||..+++.
T Consensus 57 ~~~------~~~~~~--~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~Ss~~~~~~------- 120 (215)
T 2a35_A 57 ELL------PQLDGS--IDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEM-GARHYLVVSALGADAK------- 120 (215)
T ss_dssp HHG------GGCCSC--CSEEEECCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHT-TCCEEEEECCTTCCTT-------
T ss_pred CHH------HHHHhh--hcEEEECeeeccccCCCHHHHHHhhHHHHHHHHHHHHHc-CCCEEEEECCcccCCC-------
Confidence 765 455555 9999999997653 2456778899999999999999994 8899999999877532
Q ss_pred cCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhhCCCC-EEEeecceeecccCCCCcccc
Q psy6053 260 PYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMNNGMP-CLMLRPSIIIPVWREPLPGWT 338 (614)
Q Consensus 260 ~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~~glp-~~IvRp~~I~g~~~~p~~gw~ 338 (614)
| ++.|+.+|+.+|+++++. |++ ++++||+.++|+...+ .+.
T Consensus 121 ----~-----------------------------~~~y~~sK~~~e~~~~~~---~~~~~~~vrp~~v~g~~~~~--~~~ 162 (215)
T 2a35_A 121 ----S-----------------------------SIFYNRVKGELEQALQEQ---GWPQLTIARPSLLFGPREEF--RLA 162 (215)
T ss_dssp ----C-----------------------------SSHHHHHHHHHHHHHTTS---CCSEEEEEECCSEESTTSCE--EGG
T ss_pred ----C-----------------------------ccHHHHHHHHHHHHHHHc---CCCeEEEEeCceeeCCCCcc--hHH
Confidence 1 268999999999999875 899 9999999999986541 222
Q ss_pred CCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEeccCCcccccHHH
Q psy6053 339 DNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLTSSQEWQVSWQE 411 (614)
Q Consensus 339 d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~~~~~~~it~~e 411 (614)
..+ . +....+ ++ ...++++++|+|++++.++.++ .+++||++++ +++++.+
T Consensus 163 ~~~----------~-~~~~~~-~~--~~~~~i~~~Dva~~~~~~~~~~------~~~~~~i~~~--~~~~~~~ 213 (215)
T 2a35_A 163 EIL----------A-APIARI-LP--GKYHGIEACDLARALWRLALEE------GKGVRFVESD--ELRKLGK 213 (215)
T ss_dssp GGT----------T-CCCC-------CHHHHHHHHHHHHHHHHHHTCC------CSEEEEEEHH--HHHHHHH
T ss_pred HHH----------H-Hhhhhc-cC--CCcCcEeHHHHHHHHHHHHhcC------CCCceEEcHH--HHHHhhc
Confidence 111 1 111111 22 3779999999999999988653 3679999988 6666643
No 79
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=99.91 E-value=3.7e-24 Score=212.85 Aligned_cols=212 Identities=19% Similarity=0.134 Sum_probs=157.9
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
+++|+|+|||||||||++++++|++.|+. .+|++++|+....... ...++.++.+|+
T Consensus 16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~-~~V~~~~r~~~~~~~~----------------------~~~~~~~~~~D~ 72 (242)
T 2bka_A 16 MQNKSVFILGASGETGRVLLKEILEQGLF-SKVTLIGRRKLTFDEE----------------------AYKNVNQEVVDF 72 (242)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHHTCC-SEEEEEESSCCCCCSG----------------------GGGGCEEEECCG
T ss_pred hcCCeEEEECCCcHHHHHHHHHHHcCCCC-CEEEEEEcCCCCcccc----------------------ccCCceEEecCc
Confidence 45789999999999999999999999871 1489999986542100 123678899999
Q ss_pred CCCCCCCCHHHHHHHhccccEEEEcccccChhHHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEeCceeccCCcccccc
Q psy6053 180 EADELAIKESDRQLLASEVDIMIHGAATIRFDEALKKAVLLNTRGTKMMLSLAKEMKHLELFVHISTAYCHLQEKVLYEK 259 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vST~~~~~~~~~i~E~ 259 (614)
++++ +++.+++++|+|||+||........+..+++|+.|+.+++++|++ .+.++||++||.+++...
T Consensus 73 ~d~~------~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~-~~~~~iv~~SS~~~~~~~------ 139 (242)
T 2bka_A 73 EKLD------DYASAFQGHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKA-GGCKHFNLLSSKGADKSS------ 139 (242)
T ss_dssp GGGG------GGGGGGSSCSEEEECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHH-TTCCEEEEECCTTCCTTC------
T ss_pred CCHH------HHHHHhcCCCEEEECCCcccccCCcccceeeeHHHHHHHHHHHHH-CCCCEEEEEccCcCCCCC------
Confidence 9876 788888999999999998766666678899999999999999999 478999999999775420
Q ss_pred cCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhhCCC-CEEEeecceeecccCCCCcccc
Q psy6053 260 PYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMNNGM-PCLMLRPSIIIPVWREPLPGWT 338 (614)
Q Consensus 260 ~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~~gl-p~~IvRp~~I~g~~~~p~~gw~ 338 (614)
++.|+.||+.+|++++.. ++ +++++|||.|+|+...+
T Consensus 140 ----------------------------------~~~Y~~sK~~~e~~~~~~---~~~~~~~vrpg~v~~~~~~~----- 177 (242)
T 2bka_A 140 ----------------------------------NFLYLQVKGEVEAKVEEL---KFDRYSVFRPGVLLCDRQES----- 177 (242)
T ss_dssp ----------------------------------SSHHHHHHHHHHHHHHTT---CCSEEEEEECCEEECTTGGG-----
T ss_pred ----------------------------------cchHHHHHHHHHHHHHhc---CCCCeEEEcCceecCCCCCC-----
Confidence 268999999999999876 78 59999999999985421
Q ss_pred CCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEeccC
Q psy6053 339 DNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLTSS 402 (614)
Q Consensus 339 d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~~~ 402 (614)
.....+...... .... ......+++++|+|++++.++.++. ..+.|++.++
T Consensus 178 ---~~~~~~~~~~~~-~~~~----~~~~~~~~~~~dva~~~~~~~~~~~-----~~~~~~~~~~ 228 (242)
T 2bka_A 178 ---RPGEWLVRKFFG-SLPD----SWASGHSVPVVTVVRAMLNNVVRPR-----DKQMELLENK 228 (242)
T ss_dssp ---SHHHHHHHHHHC-SCCT----TGGGGTEEEHHHHHHHHHHHHTSCC-----CSSEEEEEHH
T ss_pred ---cHHHHHHHHhhc-ccCc----cccCCcccCHHHHHHHHHHHHhCcc-----ccCeeEeeHH
Confidence 001112222221 1111 1112358999999999999986543 3456666543
No 80
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=99.91 E-value=7e-24 Score=219.06 Aligned_cols=240 Identities=13% Similarity=0.114 Sum_probs=171.4
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCH--HHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 102 GKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNA--RQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 102 ~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~--~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
+|+|+|||||||+|++++++|++.|++ |++++|+.....+ .+.++++ ...+++++.||+
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~---V~~~~R~~~~~~~~~~~~~~~~----------------~~~~~~~~~~D~ 64 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLGHP---TYVLFRPEVVSNIDKVQMLLYF----------------KQLGAKLIEASL 64 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCC---EEEECCSCCSSCHHHHHHHHHH----------------HTTTCEEECCCS
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCc---EEEEECCCcccchhHHHHHHHH----------------HhCCeEEEeCCC
Confidence 478999999999999999999999876 8999998654322 1112211 124688999999
Q ss_pred CCCCCCCCHHHHHHHhccccEEEEcccccChhHHHHHHHHHhHHHHHHHHHHHHHcCC-CceEEEEeCceeccCCccccc
Q psy6053 180 EADELAIKESDRQLLASEVDIMIHGAATIRFDEALKKAVLLNTRGTKMMLSLAKEMKH-LELFVHISTAYCHLQEKVLYE 258 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~-~k~~V~vST~~~~~~~~~i~E 258 (614)
++++ ++..+++++|+|||+|+..... .|+.++.+++++|++. + +++||+ |.++..... . +
T Consensus 65 ~d~~------~l~~~~~~~d~vi~~a~~~~~~--------~~~~~~~~l~~aa~~~-g~v~~~v~--S~~g~~~~~-~-~ 125 (313)
T 1qyd_A 65 DDHQ------RLVDALKQVDVVISALAGGVLS--------HHILEQLKLVEAIKEA-GNIKRFLP--SEFGMDPDI-M-E 125 (313)
T ss_dssp SCHH------HHHHHHTTCSEEEECCCCSSSS--------TTTTTHHHHHHHHHHS-CCCSEEEC--SCCSSCTTS-C-C
T ss_pred CCHH------HHHHHHhCCCEEEECCccccch--------hhHHHHHHHHHHHHhc-CCCceEEe--cCCcCCccc-c-c
Confidence 9865 8999999999999999976532 3788999999999995 6 999986 333321111 0 0
Q ss_pred ccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhhCCCCEEEeecceeecccCCCCcccc
Q psy6053 259 KPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMNNGMPCLMLRPSIIIPVWREPLPGWT 338 (614)
Q Consensus 259 ~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~~glp~~IvRp~~I~g~~~~p~~gw~ 338 (614)
. +..| ..+.| .+|+.+|+++++. |++++++||+.++|.....+....
T Consensus 126 ~----~~~p-------------------------~~~~y-~sK~~~e~~~~~~---g~~~~ilrp~~~~~~~~~~~~~~~ 172 (313)
T 1qyd_A 126 H----ALQP-------------------------GSITF-IDKRKVRRAIEAA---SIPYTYVSSNMFAGYFAGSLAQLD 172 (313)
T ss_dssp C----CCSS-------------------------TTHHH-HHHHHHHHHHHHT---TCCBCEEECCEEHHHHTTTSSCTT
T ss_pred c----CCCC-------------------------CcchH-HHHHHHHHHHHhc---CCCeEEEEeceecccccccccccc
Confidence 0 1000 01468 9999999999764 899999999999886432111100
Q ss_pred CCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEeccCCcccccHHHHHHHHhh
Q psy6053 339 DNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLTSSQEWQVSWQEIIDIGKS 418 (614)
Q Consensus 339 d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~~~~~~~it~~e~~~~~~~ 418 (614)
+ .....+....++++++...++++++|+|++++.++.++.. .+++|+++++. +++|+.|+++.+.+
T Consensus 173 ~---------~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~----~~~~~~~~g~~-~~~s~~e~~~~~~~ 238 (313)
T 1qyd_A 173 G---------HMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQT----LNKTMYIRPPM-NILSQKEVIQIWER 238 (313)
T ss_dssp C---------CSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGGG----SSSEEECCCGG-GEEEHHHHHHHHHH
T ss_pred c---------cccCCCCeEEEeCCCCceEEEEEHHHHHHHHHHHHhCccc----CCceEEEeCCC-CccCHHHHHHHHHH
Confidence 0 0001122223457788999999999999999998876542 46777776431 67999999999999
Q ss_pred hcccccCC
Q psy6053 419 IVTTEVPL 426 (614)
Q Consensus 419 ~~g~~~p~ 426 (614)
.+|.+.+.
T Consensus 239 ~~g~~~~~ 246 (313)
T 1qyd_A 239 LSEQNLDK 246 (313)
T ss_dssp HHTCCCEE
T ss_pred hcCCCCce
Confidence 99986543
No 81
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=99.91 E-value=7e-24 Score=217.92 Aligned_cols=232 Identities=12% Similarity=0.049 Sum_probs=173.1
Q ss_pred CcEEEEecccccccHHHHHHHHhhC-CCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCC
Q psy6053 102 GKTLFMTGASGFLGKVLLEKILRKS-PNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAE 180 (614)
Q Consensus 102 ~~~VLITGaTGFlG~~Ll~~Ll~~g-~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~ 180 (614)
+|+|||||||||+|++++++|++.| ++ |++++|+...... +.+ ...+++++.+|++
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~---V~~~~R~~~~~~~-~~l-------------------~~~~~~~~~~D~~ 61 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFK---VRVVTRNPRKKAA-KEL-------------------RLQGAEVVQGDQD 61 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSE---EEEEESCTTSHHH-HHH-------------------HHTTCEEEECCTT
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCce---EEEEEcCCCCHHH-HHH-------------------HHCCCEEEEecCC
Confidence 5789999999999999999999997 55 9999998654211 111 1146789999999
Q ss_pred CCCCCCCHHHHHHHhccccEEEEcccccChhHHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEeCceeccCCccccccc
Q psy6053 181 ADELAIKESDRQLLASEVDIMIHGAATIRFDEALKKAVLLNTRGTKMMLSLAKEMKHLELFVHISTAYCHLQEKVLYEKP 260 (614)
Q Consensus 181 ~~~lGLs~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vST~~~~~~~~~i~E~~ 260 (614)
+++ .+..+++++|+|||+|+.... ...+.|+.++++++++|++. ++++||++||..+++.. +.
T Consensus 62 d~~------~l~~~~~~~d~vi~~a~~~~~-----~~~~~~~~~~~~~~~aa~~~-gv~~iv~~S~~~~~~~~----~~- 124 (299)
T 2wm3_A 62 DQV------IMELALNGAYATFIVTNYWES-----CSQEQEVKQGKLLADLARRL-GLHYVVYSGLENIKKLT----AG- 124 (299)
T ss_dssp CHH------HHHHHHTTCSEEEECCCHHHH-----TCHHHHHHHHHHHHHHHHHH-TCSEEEECCCCCHHHHT----TT-
T ss_pred CHH------HHHHHHhcCCEEEEeCCCCcc-----ccchHHHHHHHHHHHHHHHc-CCCEEEEEcCccccccC----CC-
Confidence 865 899999999999999985321 12356899999999999994 89999998876554311 10
Q ss_pred CCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhhCCCCEEEeecceeecccCCCCccccCC
Q psy6053 261 YPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMNNGMPCLMLRPSIIIPVWREPLPGWTDN 340 (614)
Q Consensus 261 ~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~~glp~~IvRp~~I~g~~~~p~~gw~d~ 340 (614)
..++.|+.+|+.+|+++++. |++++++||+.++|+... .|...
T Consensus 125 -------------------------------~~~~~y~~sK~~~e~~~~~~---gi~~~ilrp~~~~~~~~~---~~~~~ 167 (299)
T 2wm3_A 125 -------------------------------RLAAAHFDGKGEVEEYFRDI---GVPMTSVRLPCYFENLLS---HFLPQ 167 (299)
T ss_dssp -------------------------------SCCCHHHHHHHHHHHHHHHH---TCCEEEEECCEEGGGGGT---TTCCE
T ss_pred -------------------------------cccCchhhHHHHHHHHHHHC---CCCEEEEeecHHhhhchh---hcCCc
Confidence 12368999999999999875 899999999999997432 11111
Q ss_pred CCchHHHHHHHhcCce-eeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEeccCCcccccHHHHHHHHhhh
Q psy6053 341 INGPTGLLIGAGKGVI-RTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLTSSQEWQVSWQEIIDIGKSI 419 (614)
Q Consensus 341 ~~g~~~~~~~~~~g~~-~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~~~~~~~it~~e~~~~~~~~ 419 (614)
. ...|.. ....+.++...++++++|+|++++.++.++.. ..+++||+++ +++|+.|+++.+.+.
T Consensus 168 ~---------~~~g~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~---~~g~~~~~~g---~~~s~~e~~~~~~~~ 232 (299)
T 2wm3_A 168 K---------APDGKSYLLSLPTGDVPMDGMSVSDLGPVVLSLLKMPEK---YVGQNIGLST---CRHTAEEYAALLTKH 232 (299)
T ss_dssp E---------CTTSSSEEECCCCTTSCEEEECGGGHHHHHHHHHHSHHH---HTTCEEECCS---EEECHHHHHHHHHHH
T ss_pred c---------cCCCCEEEEEecCCCCccceecHHHHHHHHHHHHcChhh---hCCeEEEeee---ccCCHHHHHHHHHHH
Confidence 0 112311 11123477889999999999999999876421 1467999975 369999999999999
Q ss_pred cccccC
Q psy6053 420 VTTEVP 425 (614)
Q Consensus 420 ~g~~~p 425 (614)
+|.+.+
T Consensus 233 ~g~~~~ 238 (299)
T 2wm3_A 233 TRKVVH 238 (299)
T ss_dssp HSSCEE
T ss_pred HCCCce
Confidence 898654
No 82
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=99.91 E-value=1.9e-23 Score=220.18 Aligned_cols=233 Identities=15% Similarity=0.062 Sum_probs=171.2
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCC-CC
Q psy6053 102 GKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGD-AE 180 (614)
Q Consensus 102 ~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gD-l~ 180 (614)
+|+|||||||||+|++++++|+++|++ |++++|+..... .+.+. ...+++++.+| ++
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~---V~~~~R~~~~~~-~~~l~------------------~~~~v~~v~~D~l~ 62 (352)
T 1xgk_A 5 KKTIAVVGATGRQGASLIRVAAAVGHH---VRAQVHSLKGLI-AEELQ------------------AIPNVTLFQGPLLN 62 (352)
T ss_dssp CCCEEEESTTSHHHHHHHHHHHHTTCC---EEEEESCSCSHH-HHHHH------------------TSTTEEEEESCCTT
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCE---EEEEECCCChhh-HHHHh------------------hcCCcEEEECCccC
Confidence 578999999999999999999999876 899999865421 11111 12468899999 99
Q ss_pred CCCCCCCHHHHHHHhccccEEEEcccccChhHHHHHHHHHhHHHHHHHHHHHHHcCC-CceEEEEeCceeccCCcccccc
Q psy6053 181 ADELAIKESDRQLLASEVDIMIHGAATIRFDEALKKAVLLNTRGTKMMLSLAKEMKH-LELFVHISTAYCHLQEKVLYEK 259 (614)
Q Consensus 181 ~~~lGLs~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~-~k~~V~vST~~~~~~~~~i~E~ 259 (614)
+++ ++..+++++|+|||+++.... +.|+.+ ++++++|++. + +++|||+||.++..
T Consensus 63 d~~------~l~~~~~~~d~Vi~~a~~~~~--------~~~~~~-~~l~~aa~~~-g~v~~~V~~SS~~~~~-------- 118 (352)
T 1xgk_A 63 NVP------LMDTLFEGAHLAFINTTSQAG--------DEIAIG-KDLADAAKRA-GTIQHYIYSSMPDHSL-------- 118 (352)
T ss_dssp CHH------HHHHHHTTCSEEEECCCSTTS--------CHHHHH-HHHHHHHHHH-SCCSEEEEEECCCGGG--------
T ss_pred CHH------HHHHHHhcCCEEEEcCCCCCc--------HHHHHH-HHHHHHHHHc-CCccEEEEeCCccccc--------
Confidence 865 788999999999999986421 347777 9999999995 6 89999999986311
Q ss_pred cCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhhCCCCEEEeecceeecccCCCCccccC
Q psy6053 260 PYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMNNGMPCLMLRPSIIIPVWREPLPGWTD 339 (614)
Q Consensus 260 ~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~~glp~~IvRp~~I~g~~~~p~~gw~d 339 (614)
|.. ..++.|+.||+.+|+++++. |++++|+||+ +||+...... .
T Consensus 119 -~~~----------------------------~~~~~y~~sK~~~E~~~~~~---gi~~~ivrpg-~~g~~~~~~~---~ 162 (352)
T 1xgk_A 119 -YGP----------------------------WPAVPMWAPKFTVENYVRQL---GLPSTFVYAG-IYNNNFTSLP---Y 162 (352)
T ss_dssp -TSS----------------------------CCCCTTTHHHHHHHHHHHTS---SSCEEEEEEC-EEGGGCBSSS---C
T ss_pred -cCC----------------------------CCCccHHHHHHHHHHHHHHc---CCCEEEEecc-eecCCchhcc---c
Confidence 000 11378999999999999875 8999999988 5776532110 0
Q ss_pred CCCchHHHHHHHhcCcee-eEeeCCCccccceeH-HHHHHHHHHHHHhhhhcCCCCccEEEeccCCcccccHHHHHHHHh
Q psy6053 340 NINGPTGLLIGAGKGVIR-TMFCDNTGYADFLPV-DITINGIFVAIWAYLSQKEHRQSIVHLTSSQEWQVSWQEIIDIGK 417 (614)
Q Consensus 340 ~~~g~~~~~~~~~~g~~~-~~~~~~~~~~d~vpV-Ddva~aii~~~~~~~~~~~~~~~vyni~~~~~~~it~~e~~~~~~ 417 (614)
..... .....|... .++++++...+++++ +|+|++++.++.++.. ...+++||+++ .++|+.|+++.+.
T Consensus 163 ~~~~~----~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~ai~~~l~~~~~--~~~g~~~~l~~---~~~s~~e~~~~i~ 233 (352)
T 1xgk_A 163 PLFQM----ELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQ--KWNGHRIALTF---ETLSPVQVCAAFS 233 (352)
T ss_dssp SSCBE----EECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHH--HHTTCEEEECS---EEECHHHHHHHHH
T ss_pred ccccc----cccCCCceEEeeccCCCCceeeEecHHHHHHHHHHHHhCCch--hhCCeEEEEec---CCCCHHHHHHHHH
Confidence 00000 001234332 345668889999999 9999999999876421 01478999994 4699999999999
Q ss_pred hhcccccC
Q psy6053 418 SIVTTEVP 425 (614)
Q Consensus 418 ~~~g~~~p 425 (614)
+.+|.+.+
T Consensus 234 ~~~G~~~~ 241 (352)
T 1xgk_A 234 RALNRRVT 241 (352)
T ss_dssp HHHTSCEE
T ss_pred HHHCCCCc
Confidence 99898654
No 83
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=99.90 E-value=3.4e-23 Score=213.38 Aligned_cols=237 Identities=12% Similarity=0.155 Sum_probs=167.5
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCCC
Q psy6053 102 GKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAEA 181 (614)
Q Consensus 102 ~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~~ 181 (614)
+|+|+|||||||+|+++++.|+++|++ |++++|+.......++.+.+. .+ ...+++++.+|+++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~---V~~l~R~~~~~~~~~~~~~~~------~l-------~~~~v~~v~~D~~d 67 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGHP---TFLLVRESTASSNSEKAQLLE------SF-------KASGANIVHGSIDD 67 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCC---EEEECCCCCTTTTHHHHHHHH------HH-------HTTTCEEECCCTTC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCC---EEEEECCcccccCHHHHHHHH------HH-------HhCCCEEEEeccCC
Confidence 578999999999999999999999876 899999865431111211110 00 12468899999998
Q ss_pred CCCCCCHHHHHHHhccccEEEEcccccChhHHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEeCceeccCCcccccccC
Q psy6053 182 DELAIKESDRQLLASEVDIMIHGAATIRFDEALKKAVLLNTRGTKMMLSLAKEMKHLELFVHISTAYCHLQEKVLYEKPY 261 (614)
Q Consensus 182 ~~lGLs~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vST~~~~~~~~~i~E~~~ 261 (614)
++ .+..+++++|+|||+|+... +.++.+++++|++.+++++||+ | .++... +|..
T Consensus 68 ~~------~l~~~~~~~d~vi~~a~~~~------------~~~~~~l~~aa~~~g~v~~~v~-S-~~g~~~----~~~~- 122 (308)
T 1qyc_A 68 HA------SLVEAVKNVDVVISTVGSLQ------------IESQVNIIKAIKEVGTVKRFFP-S-EFGNDV----DNVH- 122 (308)
T ss_dssp HH------HHHHHHHTCSEEEECCCGGG------------SGGGHHHHHHHHHHCCCSEEEC-S-CCSSCT----TSCC-
T ss_pred HH------HHHHHHcCCCEEEECCcchh------------hhhHHHHHHHHHhcCCCceEee-c-ccccCc----cccc-
Confidence 65 88999999999999998643 5567899999999633999984 4 333111 1110
Q ss_pred CCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhhCCCCEEEeecceeecccCCCCccccCCC
Q psy6053 262 PPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMNNGMPCLMLRPSIIIPVWREPLPGWTDNI 341 (614)
Q Consensus 262 ~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~~glp~~IvRp~~I~g~~~~p~~gw~d~~ 341 (614)
+..|. .+.| .+|..+|+.+++. +++++++||+.++|.....+..+..
T Consensus 123 --~~~p~-------------------------~~~y-~sK~~~e~~~~~~---~~~~~~~r~~~~~~~~~~~~~~~~~-- 169 (308)
T 1qyc_A 123 --AVEPA-------------------------KSVF-EVKAKVRRAIEAE---GIPYTYVSSNCFAGYFLRSLAQAGL-- 169 (308)
T ss_dssp --CCTTH-------------------------HHHH-HHHHHHHHHHHHH---TCCBEEEECCEEHHHHTTTTTCTTC--
T ss_pred --cCCcc-------------------------hhHH-HHHHHHHHHHHhc---CCCeEEEEeceeccccccccccccc--
Confidence 11110 1468 9999999999875 8999999999998864321111000
Q ss_pred CchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEeccCCcccccHHHHHHHHhhhcc
Q psy6053 342 NGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLTSSQEWQVSWQEIIDIGKSIVT 421 (614)
Q Consensus 342 ~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~~~~~~~it~~e~~~~~~~~~g 421 (614)
....+....++++++...++++++|+|++++.++.++.. .+++|++.++. +.+|+.|+++.+.+.+|
T Consensus 170 --------~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~----~~~~~~~~g~~-~~~s~~e~~~~~~~~~g 236 (308)
T 1qyc_A 170 --------TAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRT----LNKTLYLRLPA-NTLSLNELVALWEKKID 236 (308)
T ss_dssp --------SSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGGG----TTEEEECCCGG-GEEEHHHHHHHHHHHTT
T ss_pred --------cCCCCCceEEecCCCceEEEecHHHHHHHHHHHHhCccc----cCeEEEEeCCC-CccCHHHHHHHHHHHhC
Confidence 001222334567888999999999999999988866542 46778876431 67999999999999989
Q ss_pred cccC
Q psy6053 422 TEVP 425 (614)
Q Consensus 422 ~~~p 425 (614)
.+.+
T Consensus 237 ~~~~ 240 (308)
T 1qyc_A 237 KTLE 240 (308)
T ss_dssp SCCE
T ss_pred CCCc
Confidence 8654
No 84
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=99.90 E-value=2.3e-23 Score=201.32 Aligned_cols=202 Identities=12% Similarity=0.061 Sum_probs=150.3
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCCC
Q psy6053 102 GKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAEA 181 (614)
Q Consensus 102 ~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~~ 181 (614)
+|+|+|||||||+|++++++|++.|++ |+++.|++..... . ...+++++.+|+++
T Consensus 3 ~~~ilVtGatG~iG~~l~~~l~~~g~~---V~~~~r~~~~~~~---------------------~-~~~~~~~~~~D~~~ 57 (206)
T 1hdo_A 3 VKKIAIFGATGQTGLTTLAQAVQAGYE---VTVLVRDSSRLPS---------------------E-GPRPAHVVVGDVLQ 57 (206)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCE---EEEEESCGGGSCS---------------------S-SCCCSEEEESCTTS
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCe---EEEEEeChhhccc---------------------c-cCCceEEEEecCCC
Confidence 479999999999999999999999865 9999997532110 0 13578999999998
Q ss_pred CCCCCCHHHHHHHhccccEEEEcccccChhHHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEeCceeccCCcccccccC
Q psy6053 182 DELAIKESDRQLLASEVDIMIHGAATIRFDEALKKAVLLNTRGTKMMLSLAKEMKHLELFVHISTAYCHLQEKVLYEKPY 261 (614)
Q Consensus 182 ~~lGLs~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vST~~~~~~~~~i~E~~~ 261 (614)
++ ++.++++++|+|||+|+...... ..++|+.++.+++++|++. ++++||++||..+++.....
T Consensus 58 ~~------~~~~~~~~~d~vi~~a~~~~~~~----~~~~n~~~~~~~~~~~~~~-~~~~~v~~Ss~~~~~~~~~~----- 121 (206)
T 1hdo_A 58 AA------DVDKTVAGQDAVIVLLGTRNDLS----PTTVMSEGARNIVAAMKAH-GVDKVVACTSAFLLWDPTKV----- 121 (206)
T ss_dssp HH------HHHHHHTTCSEEEECCCCTTCCS----CCCHHHHHHHHHHHHHHHH-TCCEEEEECCGGGTSCTTCS-----
T ss_pred HH------HHHHHHcCCCEEEECccCCCCCC----ccchHHHHHHHHHHHHHHh-CCCeEEEEeeeeeccCcccc-----
Confidence 65 88999999999999999765421 1258999999999999995 88999999999776532210
Q ss_pred CCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhhCCCCEEEeecceeecccCCCCccccCCC
Q psy6053 262 PPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMNNGMPCLMLRPSIIIPVWREPLPGWTDNI 341 (614)
Q Consensus 262 ~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~~glp~~IvRp~~I~g~~~~p~~gw~d~~ 341 (614)
|. ..+.|+.+|..+|+++++. +++++++||+.++.... .+..
T Consensus 122 --~~---------------------------~~~~y~~~K~~~e~~~~~~---~i~~~~lrp~~~~~~~~---~~~~--- 163 (206)
T 1hdo_A 122 --PP---------------------------RLQAVTDDHIRMHKVLRES---GLKYVAVMPPHIGDQPL---TGAY--- 163 (206)
T ss_dssp --CG---------------------------GGHHHHHHHHHHHHHHHHT---CSEEEEECCSEEECCCC---CSCC---
T ss_pred --cc---------------------------cchhHHHHHHHHHHHHHhC---CCCEEEEeCCcccCCCC---Ccce---
Confidence 00 0268999999999999653 89999999999832211 1110
Q ss_pred CchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEeccC
Q psy6053 342 NGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLTSS 402 (614)
Q Consensus 342 ~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~~~ 402 (614)
.....+... .++++++|+|++++.++.++. ..+++||++++
T Consensus 164 ---------------~~~~~~~~~-~~~i~~~Dva~~~~~~~~~~~----~~g~~~~i~~g 204 (206)
T 1hdo_A 164 ---------------TVTLDGRGP-SRVISKHDLGHFMLRCLTTDE----YDGHSTYPSHQ 204 (206)
T ss_dssp ---------------EEESSSCSS-CSEEEHHHHHHHHHHTTSCST----TTTCEEEEECC
T ss_pred ---------------EecccCCCC-CCccCHHHHHHHHHHHhcCcc----ccccceeeecc
Confidence 000011111 489999999999999887643 26789999886
No 85
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=99.89 E-value=1.4e-22 Score=208.79 Aligned_cols=238 Identities=13% Similarity=0.136 Sum_probs=166.5
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccC-CCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCC
Q psy6053 102 GKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQK-KGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAE 180 (614)
Q Consensus 102 ~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~-~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~ 180 (614)
+|+|+|||||||+|++++++|+++|++ |++++|+. ....+.++.+.+. .+ ...+++++.+|++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~---V~~~~R~~~~~~~~~~~~~~~~------~l-------~~~~v~~v~~D~~ 65 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGNP---TYALVRKTITAANPETKEELID------NY-------QSLGVILLEGDIN 65 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTCC---EEEEECCSCCSSCHHHHHHHHH------HH-------HHTTCEEEECCTT
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCCc---EEEEECCCcccCChHHHHHHHH------HH-------HhCCCEEEEeCCC
Confidence 578999999999999999999999976 89999986 3222202222110 00 1146889999999
Q ss_pred CCCCCCCHHHHHHHhccccEEEEcccccChhHHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEeCceeccCCccccccc
Q psy6053 181 ADELAIKESDRQLLASEVDIMIHGAATIRFDEALKKAVLLNTRGTKMMLSLAKEMKHLELFVHISTAYCHLQEKVLYEKP 260 (614)
Q Consensus 181 ~~~lGLs~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vST~~~~~~~~~i~E~~ 260 (614)
+++ .+..+++++|+|||+|+... +.++.+++++|++.+++++||+ |.++... +|..
T Consensus 66 d~~------~l~~~~~~~d~vi~~a~~~~------------~~~~~~l~~aa~~~g~v~~~v~--S~~g~~~----~~~~ 121 (307)
T 2gas_A 66 DHE------TLVKAIKQVDIVICAAGRLL------------IEDQVKIIKAIKEAGNVKKFFP--SEFGLDV----DRHD 121 (307)
T ss_dssp CHH------HHHHHHTTCSEEEECSSSSC------------GGGHHHHHHHHHHHCCCSEEEC--SCCSSCT----TSCC
T ss_pred CHH------HHHHHHhCCCEEEECCcccc------------cccHHHHHHHHHhcCCceEEee--cccccCc----cccc
Confidence 865 89999999999999999754 4567899999999533999983 4433211 1111
Q ss_pred CCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhhCCCCEEEeecceeecccCCCCccccCC
Q psy6053 261 YPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMNNGMPCLMLRPSIIIPVWREPLPGWTDN 340 (614)
Q Consensus 261 ~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~~glp~~IvRp~~I~g~~~~p~~gw~d~ 340 (614)
+..|. .+.| .+|+.+|+++++. |++++++||+.+++.... .+...
T Consensus 122 ---~~~p~-------------------------~~~y-~sK~~~e~~~~~~---~i~~~~lrp~~~~~~~~~---~~~~~ 166 (307)
T 2gas_A 122 ---AVEPV-------------------------RQVF-EEKASIRRVIEAE---GVPYTYLCCHAFTGYFLR---NLAQL 166 (307)
T ss_dssp ---CCTTH-------------------------HHHH-HHHHHHHHHHHHH---TCCBEEEECCEETTTTGG---GTTCT
T ss_pred ---CCCcc-------------------------hhHH-HHHHHHHHHHHHc---CCCeEEEEcceeeccccc---ccccc
Confidence 11110 1478 9999999999865 899999999998875321 11100
Q ss_pred CCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEeccCCcccccHHHHHHHHhhhc
Q psy6053 341 INGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLTSSQEWQVSWQEIIDIGKSIV 420 (614)
Q Consensus 341 ~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~~~~~~~it~~e~~~~~~~~~ 420 (614)
+ .....+....++++++...++++++|+|++++.++.++.. .+++|++.++. +.+|+.|+++.+.+.+
T Consensus 167 --~-----~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~----~~~~~~~~~~~-~~~s~~e~~~~~~~~~ 234 (307)
T 2gas_A 167 --D-----ATDPPRDKVVILGDGNVKGAYVTEADVGTFTIRAANDPNT----LNKAVHIRLPK-NYLTQNEVIALWEKKI 234 (307)
T ss_dssp --T-----CSSCCSSEEEEETTSCSEEEEECHHHHHHHHHHHHTCGGG----TTEEEECCCGG-GEEEHHHHHHHHHHHH
T ss_pred --c-----cccCCCCeEEEecCCCcceEEeeHHHHHHHHHHHHcCccc----cCceEEEeCCC-CcCCHHHHHHHHHHHh
Confidence 0 0001122234567788899999999999999999876542 46677776431 5799999999999998
Q ss_pred ccccCC
Q psy6053 421 TTEVPL 426 (614)
Q Consensus 421 g~~~p~ 426 (614)
|.+.+.
T Consensus 235 g~~~~~ 240 (307)
T 2gas_A 235 GKTLEK 240 (307)
T ss_dssp TSCCEE
T ss_pred CCCCce
Confidence 986543
No 86
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=99.89 E-value=5.6e-23 Score=213.28 Aligned_cols=232 Identities=15% Similarity=0.123 Sum_probs=167.3
Q ss_pred CCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccC-CCcCH--HHHHHHHHhChhhHHhhhhccccccCeEEEEeC
Q psy6053 101 TGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQK-KGKNA--RQRIEELFASPLFNLLKSVHGQKIIDKVLPISG 177 (614)
Q Consensus 101 ~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~-~~~~~--~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~g 177 (614)
.+|+|+|||||||+|++++++|+++|++ |++++|+. +.... .+.++++ ...+++++.+
T Consensus 3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~---V~~~~R~~~~~~~~~~~~~l~~~----------------~~~~v~~v~~ 63 (321)
T 3c1o_A 3 HMEKIIIYGGTGYIGKFMVRASLSFSHP---TFIYARPLTPDSTPSSVQLREEF----------------RSMGVTIIEG 63 (321)
T ss_dssp -CCCEEEETTTSTTHHHHHHHHHHTTCC---EEEEECCCCTTCCHHHHHHHHHH----------------HHTTCEEEEC
T ss_pred cccEEEEEcCCchhHHHHHHHHHhCCCc---EEEEECCcccccChHHHHHHHHh----------------hcCCcEEEEe
Confidence 3578999999999999999999999876 89999986 32211 1122211 1246889999
Q ss_pred CCCCCCCCCCHHHHHHHhccccEEEEcccccChhHHHHHHHHHhHHHHHHHHHHHHHcCC-CceEEEEeCceeccCCccc
Q psy6053 178 DAEADELAIKESDRQLLASEVDIMIHGAATIRFDEALKKAVLLNTRGTKMMLSLAKEMKH-LELFVHISTAYCHLQEKVL 256 (614)
Q Consensus 178 Dl~~~~lGLs~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~-~k~~V~vST~~~~~~~~~i 256 (614)
|+++++ .+..+++++|+|||+|+... +.++++++++|++. + +++||+ |.++...
T Consensus 64 D~~d~~------~l~~a~~~~d~vi~~a~~~~------------~~~~~~l~~aa~~~-g~v~~~v~--S~~g~~~---- 118 (321)
T 3c1o_A 64 EMEEHE------KMVSVLKQVDIVISALPFPM------------ISSQIHIINAIKAA-GNIKRFLP--SDFGCEE---- 118 (321)
T ss_dssp CTTCHH------HHHHHHTTCSEEEECCCGGG------------SGGGHHHHHHHHHH-CCCCEEEC--SCCSSCG----
T ss_pred cCCCHH------HHHHHHcCCCEEEECCCccc------------hhhHHHHHHHHHHh-CCccEEec--cccccCc----
Confidence 999865 89999999999999998643 56789999999995 6 999983 4443211
Q ss_pred ccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhhCCCCEEEeecceeecccCCCCcc
Q psy6053 257 YEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMNNGMPCLMLRPSIIIPVWREPLPG 336 (614)
Q Consensus 257 ~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~~glp~~IvRp~~I~g~~~~p~~g 336 (614)
+|.. +..|. .+.| .+|+.+|+++++. +++++++||+.+++....
T Consensus 119 ~~~~---~~~p~-------------------------~~~y-~sK~~~e~~~~~~---~~~~~~lrp~~~~~~~~~---- 162 (321)
T 3c1o_A 119 DRIK---PLPPF-------------------------ESVL-EKKRIIRRAIEAA---ALPYTYVSANCFGAYFVN---- 162 (321)
T ss_dssp GGCC---CCHHH-------------------------HHHH-HHHHHHHHHHHHH---TCCBEEEECCEEHHHHHH----
T ss_pred cccc---cCCCc-------------------------chHH-HHHHHHHHHHHHc---CCCeEEEEeceecccccc----
Confidence 1210 11000 1479 9999999999865 899999999998775210
Q ss_pred ccCCCCchHHHHH---HHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEeccCCcccccHHHHH
Q psy6053 337 WTDNINGPTGLLI---GAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLTSSQEWQVSWQEII 413 (614)
Q Consensus 337 w~d~~~g~~~~~~---~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~~~~~~~it~~e~~ 413 (614)
.+.. ....+.....+++++...++++++|+|++++.++.++.. .+++|+++++. +++|+.|++
T Consensus 163 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~----~g~~~~~~g~~-~~~t~~e~~ 228 (321)
T 3c1o_A 163 ---------YLLHPSPHPNRNDDIVIYGTGETKFVLNYEEDIAKYTIKVACDPRC----CNRIVIYRPPK-NIISQNELI 228 (321)
T ss_dssp ---------HHHCCCSSCCTTSCEEEETTSCCEEEEECHHHHHHHHHHHHHCGGG----TTEEEECCCGG-GEEEHHHHH
T ss_pred ---------ccccccccccccCceEEecCCCcceeEeeHHHHHHHHHHHHhCccc----cCeEEEEeCCC-CcccHHHHH
Confidence 0110 001222234567788999999999999999999987543 46778876421 689999999
Q ss_pred HHHhhhcccccCC
Q psy6053 414 DIGKSIVTTEVPL 426 (614)
Q Consensus 414 ~~~~~~~g~~~p~ 426 (614)
+.+.+.+|.+.+.
T Consensus 229 ~~~~~~~g~~~~~ 241 (321)
T 3c1o_A 229 SLWEAKSGLSFKK 241 (321)
T ss_dssp HHHHHHHTSCCCE
T ss_pred HHHHHHcCCccee
Confidence 9999999986543
No 87
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=99.89 E-value=8.3e-23 Score=211.79 Aligned_cols=229 Identities=14% Similarity=0.117 Sum_probs=165.0
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCCCC
Q psy6053 103 KTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAEAD 182 (614)
Q Consensus 103 ~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~~~ 182 (614)
++|+|||||||+|++++++|+++|++ |++++|+.... .+.++++ ...+++++.+|++++
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~g~~---V~~l~R~~~~~--~~~~~~l----------------~~~~v~~v~~Dl~d~ 70 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKLGHP---TYVFTRPNSSK--TTLLDEF----------------QSLGAIIVKGELDEH 70 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTTCC---EEEEECTTCSC--HHHHHHH----------------HHTTCEEEECCTTCH
T ss_pred CeEEEECCCchHHHHHHHHHHHCCCc---EEEEECCCCch--hhHHHHh----------------hcCCCEEEEecCCCH
Confidence 58999999999999999999999876 89999987522 2222222 114688999999986
Q ss_pred CCCCCHHHHHHHhccccEEEEcccccChhHHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEeCceeccCCcccccccCC
Q psy6053 183 ELAIKESDRQLLASEVDIMIHGAATIRFDEALKKAVLLNTRGTKMMLSLAKEMKHLELFVHISTAYCHLQEKVLYEKPYP 262 (614)
Q Consensus 183 ~lGLs~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vST~~~~~~~~~i~E~~~~ 262 (614)
+ ++..+++++|+|||+|+... +.++++++++|++.+++++||+ | .++... +|.
T Consensus 71 ~------~l~~a~~~~d~vi~~a~~~~------------~~~~~~l~~aa~~~g~v~~~v~-S-~~g~~~----~~~--- 123 (318)
T 2r6j_A 71 E------KLVELMKKVDVVISALAFPQ------------ILDQFKILEAIKVAGNIKRFLP-S-DFGVEE----DRI--- 123 (318)
T ss_dssp H------HHHHHHTTCSEEEECCCGGG------------STTHHHHHHHHHHHCCCCEEEC-S-CCSSCT----TTC---
T ss_pred H------HHHHHHcCCCEEEECCchhh------------hHHHHHHHHHHHhcCCCCEEEe-e-ccccCc----ccc---
Confidence 5 89999999999999998642 5678999999999533999985 3 332111 111
Q ss_pred CCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhhCCCCEEEeecceeecccCCCCccccCCCC
Q psy6053 263 PPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMNNGMPCLMLRPSIIIPVWREPLPGWTDNIN 342 (614)
Q Consensus 263 ~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~~glp~~IvRp~~I~g~~~~p~~gw~d~~~ 342 (614)
.+..|. .+.| .+|+.+|+++++. +++++++||+.+++...
T Consensus 124 ~~~~p~-------------------------~~~y-~sK~~~e~~~~~~---~~~~~~lr~~~~~~~~~----------- 163 (318)
T 2r6j_A 124 NALPPF-------------------------EALI-ERKRMIRRAIEEA---NIPYTYVSANCFASYFI----------- 163 (318)
T ss_dssp CCCHHH-------------------------HHHH-HHHHHHHHHHHHT---TCCBEEEECCEEHHHHH-----------
T ss_pred cCCCCc-------------------------chhH-HHHHHHHHHHHhc---CCCeEEEEcceehhhhh-----------
Confidence 011000 0468 9999999999764 89999999998866411
Q ss_pred chHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEeccCCcccccHHHHHHHHhhhccc
Q psy6053 343 GPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLTSSQEWQVSWQEIIDIGKSIVTT 422 (614)
Q Consensus 343 g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~~~~~~~it~~e~~~~~~~~~g~ 422 (614)
..++.....+....++++++...++++++|+|++++.++.++.. .+++|++.++. +.+|+.|+++.+.+.+|.
T Consensus 164 --~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~----~~~~~~~~g~~-~~~s~~e~~~~~~~~~g~ 236 (318)
T 2r6j_A 164 --NYLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTIKVATDPRA----LNRVVIYRPST-NIITQLELISRWEKKIGK 236 (318)
T ss_dssp --HHHHCTTCCCSEEEEETTSCCEEEEECHHHHHHHHHHHTTCGGG----TTEEEECCCGG-GEEEHHHHHHHHHHHHTC
T ss_pred --hhhccccCCCCceEEecCCCceeeEeeHHHHHHHHHHHhcCccc----cCeEEEecCCC-CccCHHHHHHHHHHHhCC
Confidence 01111112223334567888999999999999999998876542 46677776421 679999999999999898
Q ss_pred ccCC
Q psy6053 423 EVPL 426 (614)
Q Consensus 423 ~~p~ 426 (614)
+.+.
T Consensus 237 ~~~~ 240 (318)
T 2r6j_A 237 KFKK 240 (318)
T ss_dssp CCEE
T ss_pred CCce
Confidence 6543
No 88
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=99.86 E-value=8.1e-21 Score=192.83 Aligned_cols=241 Identities=14% Similarity=0.122 Sum_probs=172.0
Q ss_pred ccCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCC
Q psy6053 99 TFTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGD 178 (614)
Q Consensus 99 ~~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gD 178 (614)
.+++|+|+||||||+||++++++|++.|++ |+++.|... +.++..+ +.+ ...++.++.+|
T Consensus 13 ~l~~k~vlITGasggiG~~~a~~l~~~G~~---V~~~~r~~~------~~~~~~~---------~~~--~~~~~~~~~~D 72 (278)
T 2bgk_A 13 RLQDKVAIITGGAGGIGETTAKLFVRYGAK---VVIADIADD------HGQKVCN---------NIG--SPDVISFVHCD 72 (278)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCE---EEEEESCHH------HHHHHHH---------HHC--CTTTEEEEECC
T ss_pred cccCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEcCChh------HHHHHHH---------HhC--CCCceEEEECC
Confidence 367899999999999999999999999875 888888532 1221110 001 11368999999
Q ss_pred CCCCCCCCCHHHHHHHhc-------cccEEEEcccccCh---------hHHHHHHHHHhHHHHHHHHHHHHHc---CCCc
Q psy6053 179 AEADELAIKESDRQLLAS-------EVDIMIHGAATIRF---------DEALKKAVLLNTRGTKMMLSLAKEM---KHLE 239 (614)
Q Consensus 179 l~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~---------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k 239 (614)
+++++ +++.+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+... .+..
T Consensus 73 ~~~~~------~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ 146 (278)
T 2bgk_A 73 VTKDE------DVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKG 146 (278)
T ss_dssp TTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCE
T ss_pred CCCHH------HHHHHHHHHHHHcCCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCC
Confidence 99865 6777665 78999999996532 2567788999999999999988763 2467
Q ss_pred eEEEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CC
Q psy6053 240 LFVHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NG 315 (614)
Q Consensus 240 ~~V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~g 315 (614)
++|++||..+..... .....|+.||+..|.+++..+. .|
T Consensus 147 ~iv~isS~~~~~~~~-------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~g 189 (278)
T 2bgk_A 147 SIVFTASISSFTAGE-------------------------------------GVSHVYTATKHAVLGLTTSLCTELGEYG 189 (278)
T ss_dssp EEEEECCGGGTCCCT-------------------------------------TSCHHHHHHHHHHHHHHHHHHHHHGGGT
T ss_pred eEEEEeeccccCCCC-------------------------------------CCCcchHHHHHHHHHHHHHHHHHHhhcC
Confidence 999999987643210 0015799999999999887754 48
Q ss_pred CCEEEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCcc
Q psy6053 316 MPCLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQS 395 (614)
Q Consensus 316 lp~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~ 395 (614)
++++++|||.|+++......+ ........+..+ .+.....+++++|+|++++.++..... ...++
T Consensus 190 i~v~~v~Pg~v~t~~~~~~~~------~~~~~~~~~~~~-------~~~~~~~~~~~~dva~~~~~l~~~~~~--~~~G~ 254 (278)
T 2bgk_A 190 IRVNCVSPYIVASPLLTDVFG------VDSSRVEELAHQ-------AANLKGTLLRAEDVADAVAYLAGDESK--YVSGL 254 (278)
T ss_dssp EEEEEEEESCCSCCCCTTSSS------CCHHHHHHHHHH-------TCSSCSCCCCHHHHHHHHHHHHSGGGT--TCCSC
T ss_pred cEEEEEEeceecchhhhhhcc------cchhHHHHhhhc-------ccccccccCCHHHHHHHHHHHcCcccc--cCCCC
Confidence 999999999999875432110 011122121111 111224578999999999998865431 13588
Q ss_pred EEEeccCCcccccHHHHHHHHhhh
Q psy6053 396 IVHLTSSQEWQVSWQEIIDIGKSI 419 (614)
Q Consensus 396 vyni~~~~~~~it~~e~~~~~~~~ 419 (614)
+|++.++ ..+++.|+.+.+.+.
T Consensus 255 ~~~v~gg--~~~~~~e~~~~i~~~ 276 (278)
T 2bgk_A 255 NLVIDGG--YTRTNPAFPTALKHG 276 (278)
T ss_dssp EEEESTT--GGGCCTHHHHHSCSC
T ss_pred EEEECCc--ccccCCccchhhhhh
Confidence 9999998 789999999988765
No 89
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=99.85 E-value=7.6e-22 Score=197.30 Aligned_cols=240 Identities=13% Similarity=0.067 Sum_probs=157.8
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCCCC
Q psy6053 103 KTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAEAD 182 (614)
Q Consensus 103 ~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~~~ 182 (614)
|+|||||||||||++++++|++.|++ |+++.|..... . . .+.+|++++
T Consensus 2 k~vlVtGasg~iG~~l~~~L~~~g~~---V~~~~r~~~~~-------------------------~-~---~~~~D~~~~ 49 (255)
T 2dkn_A 2 SVIAITGSASGIGAALKELLARAGHT---VIGIDRGQADI-------------------------E-A---DLSTPGGRE 49 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESSSSSE-------------------------E-C---CTTSHHHHH
T ss_pred cEEEEeCCCcHHHHHHHHHHHhCCCE---EEEEeCChhHc-------------------------c-c---cccCCcccH
Confidence 58999999999999999999999875 89999975431 0 1 156788775
Q ss_pred CCCCCHHHHHHHhc----cccEEEEcccccChhHHHHHHHHHhHHHHHHHHHHHHHc---CCCceEEEEeCceeccCCcc
Q psy6053 183 ELAIKESDRQLLAS----EVDIMIHGAATIRFDEALKKAVLLNTRGTKMMLSLAKEM---KHLELFVHISTAYCHLQEKV 255 (614)
Q Consensus 183 ~lGLs~~~~~~l~~----~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~V~vST~~~~~~~~~ 255 (614)
+ +++.+++ ++|+|||+||......+++..+++|+.|+.+++++|... .+.+++|++||..++.....
T Consensus 50 ~------~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~ 123 (255)
T 2dkn_A 50 T------AVAAVLDRCGGVLDGLVCCAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAA 123 (255)
T ss_dssp H------HHHHHHHHHTTCCSEEEECCCCCTTSSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGG
T ss_pred H------HHHHHHHHcCCCccEEEECCCCCCcchhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEecccccccccc
Confidence 4 6777665 899999999987644567888999999999999988763 24589999999977653311
Q ss_pred cccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCCEEEeecceeecccC
Q psy6053 256 LYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMPCLMLRPSIIIPVWR 331 (614)
Q Consensus 256 i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp~~IvRp~~I~g~~~ 331 (614)
.. + ..+.....+++........ .....+.|+.||+..|.+++.... .|++++++|||.|+|+..
T Consensus 124 ~~------~-----~~~~~~~~~~~~~~~~~~~-~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~ 191 (255)
T 2dkn_A 124 EL------P-----MVEAMLAGDEARAIELAEQ-QGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLL 191 (255)
T ss_dssp GC------H-----HHHHHHHTCHHHHHHHHHH-HCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHH
T ss_pred cc------c-----hhhhhcccchhhhhhhccc-cCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhh
Confidence 00 0 0000111111111110000 001125899999999999988654 489999999999988632
Q ss_pred CCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEeccCCcccccHHH
Q psy6053 332 EPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLTSSQEWQVSWQE 411 (614)
Q Consensus 332 ~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~~~~~~~it~~e 411 (614)
.. .+.....+....... + ...++++++|+|++++.++..... ...+++||++++ ..++++|
T Consensus 192 ~~-------------~~~~~~~~~~~~~~~-~-~~~~~~~~~dva~~~~~l~~~~~~--~~~G~~~~v~gg--~~~~~~e 252 (255)
T 2dkn_A 192 QA-------------SKADPRYGESTRRFV-A-PLGRGSEPREVAEAIAFLLGPQAS--FIHGSVLFVDGG--MDALMRA 252 (255)
T ss_dssp HH-------------HHHCTTTHHHHHSCC-C-TTSSCBCHHHHHHHHHHHHSGGGT--TCCSCEEEESTT--HHHHHCT
T ss_pred hh-------------cccchhhHHHHHHHH-H-HhcCCCCHHHHHHHHHHHhCCCcc--cceeeEEEecCC--eEeeeec
Confidence 10 000000000000000 1 334789999999999999876521 125789999988 6665543
No 90
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=99.85 E-value=1.4e-20 Score=191.80 Aligned_cols=239 Identities=16% Similarity=0.144 Sum_probs=162.3
Q ss_pred CCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCC
Q psy6053 101 TGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAE 180 (614)
Q Consensus 101 ~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~ 180 (614)
++|+||||||||+||++++++|++.|++ |+++.|+.... +.+.+ + ...++.++.+|++
T Consensus 4 ~~k~vlVTGas~gIG~~~a~~l~~~G~~---V~~~~r~~~~~---~~~~~------------~----~~~~~~~~~~Dv~ 61 (281)
T 3m1a_A 4 SAKVWLVTGASSGFGRAIAEAAVAAGDT---VIGTARRTEAL---DDLVA------------A----YPDRAEAISLDVT 61 (281)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTCE---EEEEESSGGGG---HHHHH------------H----CTTTEEEEECCTT
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCE---EEEEeCCHHHH---HHHHH------------h----ccCCceEEEeeCC
Confidence 5789999999999999999999999875 88999975321 11111 1 3357899999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcccccCh-------hHHHHHHHHHhHHH----HHHHHHHHHHcCCCceEE
Q psy6053 181 ADELAIKESDRQLLAS-------EVDIMIHGAATIRF-------DEALKKAVLLNTRG----TKMMLSLAKEMKHLELFV 242 (614)
Q Consensus 181 ~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~g----t~~ll~la~~~~~~k~~V 242 (614)
+++ +++.+++ ++|+|||+||.... .+.++..+++|+.| ++.++..+++ .+..++|
T Consensus 62 ~~~------~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~-~~~~~iv 134 (281)
T 3m1a_A 62 DGE------RIDVVAADVLARYGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRE-RGSGSVV 134 (281)
T ss_dssp CHH------HHHHHHHHHHHHHSCCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-HTCEEEE
T ss_pred CHH------HHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCEEE
Confidence 976 6766665 68999999996432 35667789999999 5666666666 3678999
Q ss_pred EEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCCE
Q psy6053 243 HISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMPC 318 (614)
Q Consensus 243 ~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp~ 318 (614)
++||..+..... + .+.|+.||+..|.+++..+. +|+++
T Consensus 135 ~~sS~~~~~~~~---------~-----------------------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v 176 (281)
T 3m1a_A 135 NISSFGGQLSFA---------G-----------------------------FSAYSATKAALEQLSEGLADEVAPFGIKV 176 (281)
T ss_dssp EECCGGGTCCCT---------T-----------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred EEcCccccCCCC---------C-----------------------------chHHHHHHHHHHHHHHHHHHHhhccCcEE
Confidence 999986543210 0 15899999999999887654 58999
Q ss_pred EEeecceeecccCCCCccc-cCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEE
Q psy6053 319 LMLRPSIIIPVWREPLPGW-TDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIV 397 (614)
Q Consensus 319 ~IvRp~~I~g~~~~p~~gw-~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vy 397 (614)
+++|||.|.++...+.... ................ .........+.+++|+|++++.++.+.. .+..|
T Consensus 177 ~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~dva~a~~~~~~~~~-----~~~~~ 245 (281)
T 3m1a_A 177 LIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQ------LVQGSDGSQPGDPAKAAAAIRLALDTEK-----TPLRL 245 (281)
T ss_dssp EEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHH------HHHC-----CBCHHHHHHHHHHHHHSSS-----CCSEE
T ss_pred EEEecCccccccccccccccCCcchhhHHHhHHHHH------HHhhccCCCCCCHHHHHHHHHHHHhCCC-----CCeEE
Confidence 9999999987754332211 1111111111100000 0111223456789999999999987653 56789
Q ss_pred EeccCCcccccHHHHHHHHhhh
Q psy6053 398 HLTSSQEWQVSWQEIIDIGKSI 419 (614)
Q Consensus 398 ni~~~~~~~it~~e~~~~~~~~ 419 (614)
+++++ ......+....+.+.
T Consensus 246 ~l~s~--~~~~i~g~~~~i~~~ 265 (281)
T 3m1a_A 246 ALGGD--AVDFLTGHLDSVRAE 265 (281)
T ss_dssp EESHH--HHHHHHHHHHHHHHH
T ss_pred ecCch--HHHHHHHHHHHHHHH
Confidence 99987 555666666665554
No 91
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=99.84 E-value=2.6e-20 Score=186.50 Aligned_cols=226 Identities=14% Similarity=0.096 Sum_probs=159.6
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
+++|+|+||||||+||++++++|++.|++ |+++.|+.. +++++.+ .++. ...++.++.+|+
T Consensus 9 ~~~~~vlVtGasggiG~~la~~l~~~G~~---V~~~~r~~~------~~~~~~~-----~~~~-----~~~~~~~~~~D~ 69 (255)
T 1fmc_A 9 LDGKCAIITGAGAGIGKEIAITFATAGAS---VVVSDINAD------AANHVVD-----EIQQ-----LGGQAFACRCDI 69 (255)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHTTTCE---EEEEESCHH------HHHHHHH-----HHHH-----TTCCEEEEECCT
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCCE---EEEEcCCHH------HHHHHHH-----HHHH-----hCCceEEEEcCC
Confidence 56899999999999999999999999875 889998642 2222111 1111 234688999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcccccCh------hHHHHHHHHHhHHHHHHHHHHHHHc---CCCceEEE
Q psy6053 180 EADELAIKESDRQLLAS-------EVDIMIHGAATIRF------DEALKKAVLLNTRGTKMMLSLAKEM---KHLELFVH 243 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~V~ 243 (614)
++++ +++.+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+... .+.+++|+
T Consensus 70 ~~~~------~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~ 143 (255)
T 1fmc_A 70 TSEQ------ELSALADFAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILT 143 (255)
T ss_dssp TCHH------HHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred CCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEE
Confidence 9865 6777665 79999999997542 3556788999999999999888521 25689999
Q ss_pred EeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCCEE
Q psy6053 244 ISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMPCL 319 (614)
Q Consensus 244 vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp~~ 319 (614)
+||..+..... + ...|+.||+..|.+++.... .|++++
T Consensus 144 ~sS~~~~~~~~---------~-----------------------------~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~ 185 (255)
T 1fmc_A 144 ITSMAAENKNI---------N-----------------------------MTSYASSKAAASHLVRNMAFDLGEKNIRVN 185 (255)
T ss_dssp ECCGGGTCCCT---------T-----------------------------CHHHHHHHHHHHHHHHHHHHHHHTTTEEEE
T ss_pred EcchhhcCCCC---------C-----------------------------CcccHHHHHHHHHHHHHHHHHhhhcCcEEE
Confidence 99987643210 0 15799999999999887664 489999
Q ss_pred EeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEe
Q psy6053 320 MLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHL 399 (614)
Q Consensus 320 IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni 399 (614)
++|||.|+++.... ...+ .+......+. ....+.+++|+|++++.++..... ...+++||+
T Consensus 186 ~v~Pg~v~t~~~~~-------~~~~-~~~~~~~~~~---------~~~~~~~~~dva~~~~~l~~~~~~--~~~G~~~~v 246 (255)
T 1fmc_A 186 GIAPGAILTDALKS-------VITP-EIEQKMLQHT---------PIRRLGQPQDIANAALFLCSPAAS--WVSGQILTV 246 (255)
T ss_dssp EEEECSBCSHHHHT-------TCCH-HHHHHHHHTC---------SSCSCBCHHHHHHHHHHHHSGGGT--TCCSCEEEE
T ss_pred EEecccCcchhhhh-------ccCh-HHHHHHHhcC---------CcccCCCHHHHHHHHHHHhCCccc--cCCCcEEEE
Confidence 99999998764321 0111 1222222221 113467899999999988865431 125789999
Q ss_pred ccCCcccccH
Q psy6053 400 TSSQEWQVSW 409 (614)
Q Consensus 400 ~~~~~~~it~ 409 (614)
+++ ...|+
T Consensus 247 ~gg--~~~s~ 254 (255)
T 1fmc_A 247 SGG--GVQEL 254 (255)
T ss_dssp STT--SCCCC
T ss_pred CCc--eeccC
Confidence 988 55553
No 92
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=99.83 E-value=8.1e-20 Score=181.23 Aligned_cols=200 Identities=11% Similarity=0.025 Sum_probs=139.9
Q ss_pred CCcEEEEecccccccHHHHHHHHhhC-CCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 101 TGKTLFMTGASGFLGKVLLEKILRKS-PNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 101 ~~~~VLITGaTGFlG~~Ll~~Ll~~g-~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
.+|+||||||||+||++++++|++.| ++ |++++|+...... . ...++.++.+|+
T Consensus 22 ~mk~vlVtGatG~iG~~l~~~L~~~G~~~---V~~~~R~~~~~~~---------------------~-~~~~~~~~~~Dl 76 (236)
T 3qvo_A 22 HMKNVLILGAGGQIARHVINQLADKQTIK---QTLFARQPAKIHK---------------------P-YPTNSQIIMGDV 76 (236)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCTTEE---EEEEESSGGGSCS---------------------S-CCTTEEEEECCT
T ss_pred cccEEEEEeCCcHHHHHHHHHHHhCCCce---EEEEEcChhhhcc---------------------c-ccCCcEEEEecC
Confidence 45899999999999999999999998 44 8999997543110 0 235789999999
Q ss_pred CCCCCCCCHHHHHHHhccccEEEEcccccChhHHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEeCceeccCCcc--cc
Q psy6053 180 EADELAIKESDRQLLASEVDIMIHGAATIRFDEALKKAVLLNTRGTKMMLSLAKEMKHLELFVHISTAYCHLQEKV--LY 257 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vST~~~~~~~~~--i~ 257 (614)
++++ +++.+++++|+|||+|+...+. .++++++++|++ .++++||++||..+++.... ..
T Consensus 77 ~d~~------~~~~~~~~~D~vv~~a~~~~~~-----------~~~~~~~~~~~~-~~~~~iV~iSS~~~~~~~~~~~~~ 138 (236)
T 3qvo_A 77 LNHA------ALKQAMQGQDIVYANLTGEDLD-----------IQANSVIAAMKA-CDVKRLIFVLSLGIYDEVPGKFVE 138 (236)
T ss_dssp TCHH------HHHHHHTTCSEEEEECCSTTHH-----------HHHHHHHHHHHH-TTCCEEEEECCCCC----------
T ss_pred CCHH------HHHHHhcCCCEEEEcCCCCchh-----------HHHHHHHHHHHH-cCCCEEEEEecceecCCCCccccc
Confidence 9865 8999999999999999875432 346789999999 48899999999977654321 00
Q ss_pred cccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhhCCCCEEEeecceeecccCCCCccc
Q psy6053 258 EKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMNNGMPCLMLRPSIIIPVWREPLPGW 337 (614)
Q Consensus 258 E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~~glp~~IvRp~~I~g~~~~p~~gw 337 (614)
+. ...+..+...|..+|+.+.. .|++++++|||.++++.....
T Consensus 139 ~~-------------------------------~~~~~~~~~~~~~~~~~l~~---~gi~~~~vrPg~i~~~~~~~~--- 181 (236)
T 3qvo_A 139 WN-------------------------------NAVIGEPLKPFRRAADAIEA---SGLEYTILRPAWLTDEDIIDY--- 181 (236)
T ss_dssp -------------------------------------CGGGHHHHHHHHHHHT---SCSEEEEEEECEEECCSCCCC---
T ss_pred ch-------------------------------hhcccchHHHHHHHHHHHHH---CCCCEEEEeCCcccCCCCcce---
Confidence 00 00112344556666776653 399999999999988643211
Q ss_pred cCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEeccC
Q psy6053 338 TDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLTSS 402 (614)
Q Consensus 338 ~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~~~ 402 (614)
............+++++|+|++++.++.++.. ..+++|+++++
T Consensus 182 -------------------~~~~~~~~~~~~~i~~~DvA~~i~~ll~~~~~---~~g~~~~i~~~ 224 (236)
T 3qvo_A 182 -------------------ELTSRNEPFKGTIVSRKSVAALITDIIDKPEK---HIGENIGINQP 224 (236)
T ss_dssp -------------------EEECTTSCCSCSEEEHHHHHHHHHHHHHSTTT---TTTEEEEEECS
T ss_pred -------------------EEeccCCCCCCcEECHHHHHHHHHHHHcCccc---ccCeeEEecCC
Confidence 00011111123579999999999999987652 26789999987
No 93
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=99.82 E-value=1.4e-19 Score=180.01 Aligned_cols=218 Identities=14% Similarity=0.177 Sum_probs=155.2
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
+++|+|+||||||+||++++++|++.|++ |+++.|+. ++++++.+ ...+++++.+|+
T Consensus 5 ~~~~~vlVTGasggiG~~~a~~l~~~G~~---V~~~~r~~------~~~~~~~~--------------~~~~~~~~~~D~ 61 (244)
T 1cyd_A 5 FSGLRALVTGAGKGIGRDTVKALHASGAK---VVAVTRTN------SDLVSLAK--------------ECPGIEPVCVDL 61 (244)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCE---EEEEESCH------HHHHHHHH--------------HSTTCEEEECCT
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCE---EEEEeCCH------HHHHHHHH--------------hccCCCcEEecC
Confidence 56899999999999999999999999876 88898863 22222211 112456779999
Q ss_pred CCCCCCCCHHHHHHHhc---cccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHHc---CC-CceEEEEe
Q psy6053 180 EADELAIKESDRQLLAS---EVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKEM---KH-LELFVHIS 245 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~---~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~-~k~~V~vS 245 (614)
++++ +++.+++ .+|+|||+||.... .+.++..+++|+.|+.++++.+... .+ .+++|++|
T Consensus 62 ~~~~------~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~s 135 (244)
T 1cyd_A 62 GDWD------ATEKALGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVS 135 (244)
T ss_dssp TCHH------HHHHHHTTCCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEEC
T ss_pred CCHH------HHHHHHHHcCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEc
Confidence 9865 7888776 48999999996432 3556778999999999999887652 13 57899999
Q ss_pred CceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCCEEEe
Q psy6053 246 TAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMPCLML 321 (614)
Q Consensus 246 T~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp~~Iv 321 (614)
|..+..... + ...|+.||+..|.+++.... .|++++++
T Consensus 136 S~~~~~~~~---------~-----------------------------~~~Y~~sK~a~~~~~~~~a~~~~~~gi~v~~v 177 (244)
T 1cyd_A 136 SMVAHVTFP---------N-----------------------------LITYSSTKGAMTMLTKAMAMELGPHKIRVNSV 177 (244)
T ss_dssp CGGGTSCCT---------T-----------------------------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred chhhcCCCC---------C-----------------------------cchhHHHHHHHHHHHHHHHHHhhhcCeEEEEE
Confidence 986643210 0 15799999999999987654 48999999
Q ss_pred ecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEecc
Q psy6053 322 RPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLTS 401 (614)
Q Consensus 322 Rp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~~ 401 (614)
|||.|+++...+. .....++..+..+ ....++++++|+|++++.++..... ...++++++.+
T Consensus 178 ~pg~v~t~~~~~~-------~~~~~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~~~~~~--~~~G~~~~v~g 239 (244)
T 1cyd_A 178 NPTVVLTDMGKKV-------SADPEFARKLKER---------HPLRKFAEVEDVVNSILFLLSDRSA--STSGGGILVDA 239 (244)
T ss_dssp EECCBTTHHHHHH-------TCCHHHHHHHHHH---------STTSSCBCHHHHHHHHHHHHSGGGT--TCCSSEEEEST
T ss_pred ecCcccCcccccc-------ccCHHHHHHHHhc---------CCccCCCCHHHHHHHHHHHhCchhh--cccCCEEEECC
Confidence 9999988642110 0011122222221 1225789999999999998865432 12577888877
Q ss_pred C
Q psy6053 402 S 402 (614)
Q Consensus 402 ~ 402 (614)
+
T Consensus 240 G 240 (244)
T 1cyd_A 240 G 240 (244)
T ss_dssp T
T ss_pred C
Confidence 6
No 94
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=99.82 E-value=8e-20 Score=179.15 Aligned_cols=202 Identities=14% Similarity=0.137 Sum_probs=143.0
Q ss_pred cEEEEecccccccHHHHHHHH-hhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCCC
Q psy6053 103 KTLFMTGASGFLGKVLLEKIL-RKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAEA 181 (614)
Q Consensus 103 ~~VLITGaTGFlG~~Ll~~Ll-~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~~ 181 (614)
|+|+||||||++|++++++|+ +.|++ |+++.|+.. ++++++.. ...++.++.+|+++
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g~~---V~~~~r~~~-----~~~~~~~~--------------~~~~~~~~~~D~~d 63 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTDMH---ITLYGRQLK-----TRIPPEII--------------DHERVTVIEGSFQN 63 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCCCE---EEEEESSHH-----HHSCHHHH--------------TSTTEEEEECCTTC
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCCce---EEEEecCcc-----ccchhhcc--------------CCCceEEEECCCCC
Confidence 569999999999999999999 78765 899999742 02222110 23578999999998
Q ss_pred CCCCCCHHHHHHHhccccEEEEcccccChhHHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEeCceeccCCcc-ccccc
Q psy6053 182 DELAIKESDRQLLASEVDIMIHGAATIRFDEALKKAVLLNTRGTKMMLSLAKEMKHLELFVHISTAYCHLQEKV-LYEKP 260 (614)
Q Consensus 182 ~~lGLs~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vST~~~~~~~~~-i~E~~ 260 (614)
++ ++..+++++|+|||+|+.. |+. ++++++.+++ .++++||++||..++..... ..+
T Consensus 64 ~~------~~~~~~~~~d~vv~~ag~~------------n~~-~~~~~~~~~~-~~~~~iv~iSs~~~~~~~~~~~~~-- 121 (221)
T 3r6d_A 64 PG------XLEQAVTNAEVVFVGAMES------------GSD-MASIVKALSR-XNIRRVIGVSMAGLSGEFPVALEK-- 121 (221)
T ss_dssp HH------HHHHHHTTCSEEEESCCCC------------HHH-HHHHHHHHHH-TTCCEEEEEEETTTTSCSCHHHHH--
T ss_pred HH------HHHHHHcCCCEEEEcCCCC------------Chh-HHHHHHHHHh-cCCCeEEEEeeceecCCCCccccc--
Confidence 65 8999999999999999964 444 8999999999 58899999999977553210 000
Q ss_pred CCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhhCCCCEEEeecceeecccCCCCccccCC
Q psy6053 261 YPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMNNGMPCLMLRPSIIIPVWREPLPGWTDN 340 (614)
Q Consensus 261 ~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~~glp~~IvRp~~I~g~~~~p~~gw~d~ 340 (614)
+ ..+ ..++.|+.+|..+|.++++. |++++++|||.++++...
T Consensus 122 ---------------~--------~~~----~~~~~y~~~K~~~e~~~~~~---~i~~~~vrpg~v~~~~~~-------- 163 (221)
T 3r6d_A 122 ---------------W--------TFD----NLPISYVQGERQARNVLRES---NLNYTILRLTWLYNDPEX-------- 163 (221)
T ss_dssp ---------------H--------HHH----TSCHHHHHHHHHHHHHHHHS---CSEEEEEEECEEECCTTC--------
T ss_pred ---------------c--------ccc----ccccHHHHHHHHHHHHHHhC---CCCEEEEechhhcCCCCC--------
Confidence 0 000 11237999999999999764 999999999999886211
Q ss_pred CCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHH--HhhhhcCCCCccEEEeccC
Q psy6053 341 INGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAI--WAYLSQKEHRQSIVHLTSS 402 (614)
Q Consensus 341 ~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~--~~~~~~~~~~~~vyni~~~ 402 (614)
+..............+++.+|+|++++.++ .++.. ..++.+.++++
T Consensus 164 -------------~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~~~~---~~~~~~~i~~~ 211 (221)
T 3r6d_A 164 -------------TDYELIPEGAQFNDAQVSREAVVKAIFDILHAADETP---FHRTSIGVGEP 211 (221)
T ss_dssp -------------CCCEEECTTSCCCCCEEEHHHHHHHHHHHHTCSCCGG---GTTEEEEEECT
T ss_pred -------------cceeeccCCccCCCceeeHHHHHHHHHHHHHhcChhh---hhcceeeecCC
Confidence 001111111111223789999999999998 65442 24567777755
No 95
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=99.82 E-value=9.9e-20 Score=187.23 Aligned_cols=243 Identities=18% Similarity=0.117 Sum_probs=167.0
Q ss_pred ccCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCC
Q psy6053 99 TFTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGD 178 (614)
Q Consensus 99 ~~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gD 178 (614)
.+++|+|+||||||+||++++++|++.|++ |+++.|... ++++..+ .+... ...++.++.+|
T Consensus 23 ~l~~k~vlITGasggiG~~la~~L~~~G~~---V~~~~r~~~------~~~~~~~-----~l~~~----~~~~~~~~~~D 84 (302)
T 1w6u_A 23 SFQGKVAFITGGGTGLGKGMTTLLSSLGAQ---CVIASRKMD------VLKATAE-----QISSQ----TGNKVHAIQCD 84 (302)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCHH------HHHHHHH-----HHHHH----HSSCEEEEECC
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHCCCE---EEEEeCCHH------HHHHHHH-----HHHHh----cCCceEEEEeC
Confidence 367899999999999999999999999875 888888642 2222111 11111 13578999999
Q ss_pred CCCCCCCCCHHHHHHHhc-------cccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHHc----CCCce
Q psy6053 179 AEADELAIKESDRQLLAS-------EVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKEM----KHLEL 240 (614)
Q Consensus 179 l~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~----~~~k~ 240 (614)
+++++ +++.+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+... .+..+
T Consensus 85 l~~~~------~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~ 158 (302)
T 1w6u_A 85 VRDPD------MVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAA 158 (302)
T ss_dssp TTCHH------HHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEE
T ss_pred CCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCE
Confidence 99865 6666665 45999999995422 3556788999999999998887542 24579
Q ss_pred EEEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCC
Q psy6053 241 FVHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGM 316 (614)
Q Consensus 241 ~V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~gl 316 (614)
+|++||.++..... ....|+.||+..|.+++..+. .|+
T Consensus 159 iv~isS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~~~la~~~~~~gi 200 (302)
T 1w6u_A 159 FLSITTIYAETGSG--------------------------------------FVVPSASAKAGVEAMSKSLAAEWGKYGM 200 (302)
T ss_dssp EEEECCTHHHHCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTE
T ss_pred EEEEcccccccCCC--------------------------------------CcchhHHHHHHHHHHHHHHHHHhhhcCc
Confidence 99999987643210 015799999999999887654 489
Q ss_pred CEEEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccE
Q psy6053 317 PCLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSI 396 (614)
Q Consensus 317 p~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~v 396 (614)
+++++|||.|.++... +..............+. ....+.+++|+|++++.++..... ...+++
T Consensus 201 ~v~~v~Pg~v~t~~~~------~~~~~~~~~~~~~~~~~---------p~~~~~~~~dva~~~~~l~~~~~~--~~~G~~ 263 (302)
T 1w6u_A 201 RFNVIQPGPIKTKGAF------SRLDPTGTFEKEMIGRI---------PCGRLGTVEELANLAAFLCSDYAS--WINGAV 263 (302)
T ss_dssp EEEEEEECCBCC------------CCTTSHHHHHHHTTC---------TTSSCBCHHHHHHHHHHHTSGGGT--TCCSCE
T ss_pred EEEEEeeccCCCcchh------hhcccchhhHHHHHhcC---------CcCCCCCHHHHHHHHHHHcCCccc--ccCCCE
Confidence 9999999999876211 01000000111112211 112467899999999988864331 125789
Q ss_pred EEeccCCcccccHHHHHHHHhhhccc
Q psy6053 397 VHLTSSQEWQVSWQEIIDIGKSIVTT 422 (614)
Q Consensus 397 yni~~~~~~~it~~e~~~~~~~~~g~ 422 (614)
|++.++ ..+++.++.+.+.+..|.
T Consensus 264 ~~v~gg--~~~~~~~~~~~~~~~~g~ 287 (302)
T 1w6u_A 264 IKFDGG--EEVLISGEFNDLRKVTKE 287 (302)
T ss_dssp EEESTT--HHHHHHSTTGGGGGCCHH
T ss_pred EEECCC--eeeccCCccccchhhccc
Confidence 999998 778888888777776554
No 96
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=99.81 E-value=4.4e-19 Score=178.79 Aligned_cols=207 Identities=14% Similarity=0.103 Sum_probs=153.0
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
.++|+||||||+|+||++++++|++.|.+ |+++.|+.... ...++.++.+|+
T Consensus 26 ~~~k~vlVTGas~gIG~aia~~l~~~G~~---V~~~~r~~~~~-------------------------~~~~~~~~~~Dv 77 (260)
T 3un1_A 26 NQQKVVVITGASQGIGAGLVRAYRDRNYR---VVATSRSIKPS-------------------------ADPDIHTVAGDI 77 (260)
T ss_dssp TTCCEEEESSCSSHHHHHHHHHHHHTTCE---EEEEESSCCCC-------------------------SSTTEEEEESCT
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEeCChhhc-------------------------ccCceEEEEccC
Confidence 46899999999999999999999999876 88999975432 224688999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcccccC-------hhHHHHHHHHHhHHHHHHHHHHHH----HcCCCceE
Q psy6053 180 EADELAIKESDRQLLAS-------EVDIMIHGAATIR-------FDEALKKAVLLNTRGTKMMLSLAK----EMKHLELF 241 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~-------~~~~~~~~~~~Nv~gt~~ll~la~----~~~~~k~~ 241 (614)
++++ +++.+++ ++|++||+||... -.+.++..+++|+.|+.++++.+. + .+..++
T Consensus 78 ~d~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~-~~~g~i 150 (260)
T 3un1_A 78 SKPE------TADRIVREGIERFGRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLK-QGSGHI 150 (260)
T ss_dssp TSHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-TTCEEE
T ss_pred CCHH------HHHHHHHHHHHHCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH-cCCcEE
Confidence 9976 6776665 7999999999653 135677889999999999998873 4 356799
Q ss_pred EEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCC
Q psy6053 242 VHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMP 317 (614)
Q Consensus 242 V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp 317 (614)
|++||..+..... .. ....|+.||+..|.+.+..+. +|++
T Consensus 151 v~isS~~~~~~~~-------~~-----------------------------~~~~Y~~sKaa~~~l~~~la~e~~~~gI~ 194 (260)
T 3un1_A 151 VSITTSLVDQPMV-------GM-----------------------------PSALASLTKGGLNAVTRSLAMEFSRSGVR 194 (260)
T ss_dssp EEECCTTTTSCBT-------TC-----------------------------CCHHHHHHHHHHHHHHHHHHHHTTTTTEE
T ss_pred EEEechhhccCCC-------CC-----------------------------ccHHHHHHHHHHHHHHHHHHHHhCcCCeE
Confidence 9999986532211 00 015799999999999887765 4899
Q ss_pred EEEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEE
Q psy6053 318 CLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIV 397 (614)
Q Consensus 318 ~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vy 397 (614)
+.+++||.|.++...+ . ....... ......+..++|+|++++.+..... ..++++
T Consensus 195 vn~v~PG~v~t~~~~~---------~---~~~~~~~---------~~p~~r~~~~~dva~av~~L~~~~~----itG~~i 249 (260)
T 3un1_A 195 VNAVSPGVIKTPMHPA---------E---THSTLAG---------LHPVGRMGEIRDVVDAVLYLEHAGF----ITGEIL 249 (260)
T ss_dssp EEEEEECCBCCTTSCG---------G---GHHHHHT---------TSTTSSCBCHHHHHHHHHHHHHCTT----CCSCEE
T ss_pred EEEEeecCCCCCCCCH---------H---HHHHHhc---------cCCCCCCcCHHHHHHHHHHhcccCC----CCCcEE
Confidence 9999999998764321 0 0111111 1122346789999999998833222 368899
Q ss_pred EeccC
Q psy6053 398 HLTSS 402 (614)
Q Consensus 398 ni~~~ 402 (614)
++.++
T Consensus 250 ~vdGG 254 (260)
T 3un1_A 250 HVDGG 254 (260)
T ss_dssp EESTT
T ss_pred EECCC
Confidence 99887
No 97
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=99.81 E-value=3.6e-19 Score=178.81 Aligned_cols=224 Identities=14% Similarity=0.104 Sum_probs=155.8
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
+++|+|+||||||+||++++++|+++|++ |+++.|+.. ++++.. +.++. ...++.++.+|+
T Consensus 11 l~~k~vlItGasggiG~~la~~l~~~G~~---V~~~~r~~~------~~~~~~-----~~l~~-----~~~~~~~~~~D~ 71 (260)
T 3awd_A 11 LDNRVAIVTGGAQNIGLACVTALAEAGAR---VIIADLDEA------MATKAV-----EDLRM-----EGHDVSSVVMDV 71 (260)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCHH------HHHHHH-----HHHHH-----TTCCEEEEECCT
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCE---EEEEeCCHH------HHHHHH-----HHHHh-----cCCceEEEEecC
Confidence 46899999999999999999999999865 889988642 222111 11111 224689999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcccccC--------hhHHHHHHHHHhHHHHHHHHHHHHHc---CCCceE
Q psy6053 180 EADELAIKESDRQLLAS-------EVDIMIHGAATIR--------FDEALKKAVLLNTRGTKMMLSLAKEM---KHLELF 241 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~--------~~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~ 241 (614)
++++ +++.+++ ++|+|||+||... ..+.+...+++|+.|+.++++.+... .+..++
T Consensus 72 ~~~~------~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~i 145 (260)
T 3awd_A 72 TNTE------SVQNAVRSVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVI 145 (260)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEE
Confidence 9865 6666664 6899999999643 13456778999999999999888642 256799
Q ss_pred EEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCC
Q psy6053 242 VHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMP 317 (614)
Q Consensus 242 V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp 317 (614)
|++||.++...... .| ...|+.||+..|.+++.... .|++
T Consensus 146 v~~sS~~~~~~~~~-------~~-----------------------------~~~Y~~sK~a~~~~~~~l~~e~~~~gi~ 189 (260)
T 3awd_A 146 VAIGSMSGLIVNRP-------QQ-----------------------------QAAYNASKAGVHQYIRSLAAEWAPHGIR 189 (260)
T ss_dssp EEECCGGGTSCCSS-------SC-----------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred EEEecchhcccCCC-------CC-----------------------------ccccHHHHHHHHHHHHHHHHHhhhcCeE
Confidence 99999876432110 00 15799999999999887654 4899
Q ss_pred EEEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEE
Q psy6053 318 CLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIV 397 (614)
Q Consensus 318 ~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vy 397 (614)
++++|||.|+++...+ +...+ .+......+. ....+++++|+|++++.++..... ...+.+|
T Consensus 190 v~~v~pg~v~t~~~~~------~~~~~-~~~~~~~~~~---------~~~~~~~~~dva~~~~~l~~~~~~--~~~G~~~ 251 (260)
T 3awd_A 190 ANAVAPTYIETTLTRF------GMEKP-ELYDAWIAGT---------PMGRVGQPDEVASVVQFLASDAAS--LMTGAIV 251 (260)
T ss_dssp EEEEEECCBCCTTTHH------HHTCH-HHHHHHHHTC---------TTSSCBCHHHHHHHHHHHHSGGGT--TCCSCEE
T ss_pred EEEEEeeeeccchhhc------ccCCh-HHHHHHHhcC---------CcCCCCCHHHHHHHHHHHhCchhc--cCCCcEE
Confidence 9999999998874320 00011 1222222211 113478999999999988865332 1357899
Q ss_pred EeccC
Q psy6053 398 HLTSS 402 (614)
Q Consensus 398 ni~~~ 402 (614)
++.++
T Consensus 252 ~v~gg 256 (260)
T 3awd_A 252 NVDAG 256 (260)
T ss_dssp EESTT
T ss_pred EECCc
Confidence 99877
No 98
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=99.81 E-value=1.1e-18 Score=177.40 Aligned_cols=246 Identities=14% Similarity=0.087 Sum_probs=155.3
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
+++|+|+||||||+||++++++|++.|++ |+++.|+. +++++..+ .+... .. ...++.++.+|+
T Consensus 4 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~---V~~~~r~~------~~~~~~~~-----~~~~~-~~-~~~~~~~~~~D~ 67 (278)
T 1spx_A 4 FAEKVAIITGSSNGIGRATAVLFAREGAK---VTITGRHA------ERLEETRQ-----QILAA-GV-SEQNVNSVVADV 67 (278)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCE---EEEEESCH------HHHHHHHH-----HHHHT-TC-CGGGEEEEECCT
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCE---EEEEeCCH------HHHHHHHH-----HHHhc-cc-CCCceeEEeccc
Confidence 56899999999999999999999999875 88888863 22322211 11000 11 224688999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcccccC-----------hhHHHHHHHHHhHHHHHHHHHHHHHc---CCC
Q psy6053 180 EADELAIKESDRQLLAS-------EVDIMIHGAATIR-----------FDEALKKAVLLNTRGTKMMLSLAKEM---KHL 238 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~-----------~~~~~~~~~~~Nv~gt~~ll~la~~~---~~~ 238 (614)
++++ +++.+++ ++|++||+||... ..+.++..+++|+.|+.++++.+... .+
T Consensus 68 ~~~~------~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~- 140 (278)
T 1spx_A 68 TTDA------GQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK- 140 (278)
T ss_dssp TSHH------HHHHHHHHHHHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-
Confidence 9865 6777665 7999999999653 23456778999999999999888753 13
Q ss_pred ceEEEEeCcee-ccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----
Q psy6053 239 ELFVHISTAYC-HLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN---- 313 (614)
Q Consensus 239 k~~V~vST~~~-~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~---- 313 (614)
.++|++||..+ .... | ....|+.||+..|.+.+....
T Consensus 141 g~iv~isS~~~~~~~~----------~----------------------------~~~~Y~~sK~a~~~~~~~la~e~~~ 182 (278)
T 1spx_A 141 GEIVNISSIASGLHAT----------P----------------------------DFPYYSIAKAAIDQYTRNTAIDLIQ 182 (278)
T ss_dssp CEEEEECCTTSSSSCC----------T----------------------------TSHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred CeEEEEecccccccCC----------C----------------------------CccHHHHHHHHHHHHHHHHHHHHHh
Confidence 79999999865 3211 0 014799999999998877653
Q ss_pred CCCCEEEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCC-C
Q psy6053 314 NGMPCLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKE-H 392 (614)
Q Consensus 314 ~glp~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~-~ 392 (614)
.|++++++|||.|.++.......-................. . + ...+.+++|+|++++.++..... . .
T Consensus 183 ~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~----~---p--~~~~~~~~dvA~~v~~l~s~~~~--~~~ 251 (278)
T 1spx_A 183 HGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKEC----V---P--AGVMGQPQDIAEVIAFLADRKTS--SYI 251 (278)
T ss_dssp GTCEEEEEEECCBCCCC--------------HHHHHHHHHH----C---T--TSSCBCHHHHHHHHHHHHCHHHH--TTC
T ss_pred cCcEEEEEecCcccCccccccccCchhhhhhhHHHHHHHhc----C---C--CcCCCCHHHHHHHHHHHcCcccc--Ccc
Confidence 58999999999998764321000000000000001111110 0 1 12478999999999988865432 1 2
Q ss_pred CccEEEeccCCcccccHHHHHHHHhhh
Q psy6053 393 RQSIVHLTSSQEWQVSWQEIIDIGKSI 419 (614)
Q Consensus 393 ~~~vyni~~~~~~~it~~e~~~~~~~~ 419 (614)
.++++++.++ ..+++.++.+.+.+.
T Consensus 252 tG~~~~vdgG--~~~~~~~~~~~~~~~ 276 (278)
T 1spx_A 252 IGHQLVVDGG--SSLIMGLHCQDFAKL 276 (278)
T ss_dssp CSCEEEESTT--GGGC-----------
T ss_pred cCcEEEECCC--cccccCcccccHHHH
Confidence 5889999988 789999999888765
No 99
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=99.80 E-value=8.5e-19 Score=176.46 Aligned_cols=232 Identities=13% Similarity=0.113 Sum_probs=151.5
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhcc--ccccCeEEEEeC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHG--QKIIDKVLPISG 177 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p--~~~~~~v~~v~g 177 (614)
+++|+|+||||||+||++++++|++.|++ |+++.|+.. ++++..+. +..... .....++.++.+
T Consensus 5 ~~~k~vlITGasggiG~~la~~l~~~G~~---V~~~~r~~~------~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 70 (264)
T 2pd6_A 5 LRSALALVTGAGSGIGRAVSVRLAGEGAT---VAACDLDRA------AAQETVRL-----LGGPGSKEGPPRGNHAAFQA 70 (264)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESSHH------HHHHHHHT-----C------------CCEEEEC
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCE---EEEEeCChH------HHHHHHHH-----HHhcCccccccCcceEEEEe
Confidence 56899999999999999999999999865 889988642 22222110 000000 001146889999
Q ss_pred CCCCCCCCCCHHHHHHHhcc-------c-cEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHHc---CC-C
Q psy6053 178 DAEADELAIKESDRQLLASE-------V-DIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKEM---KH-L 238 (614)
Q Consensus 178 Dl~~~~lGLs~~~~~~l~~~-------v-d~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~-~ 238 (614)
|+++++ +++.++++ + |+|||+||.... .+.++..+++|+.|+.++++++... .+ .
T Consensus 71 D~~~~~------~~~~~~~~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ 144 (264)
T 2pd6_A 71 DVSEAR------AARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCR 144 (264)
T ss_dssp CTTSHH------HHHHHHHHHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC
T ss_pred cCCCHH------HHHHHHHHHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCC
Confidence 999865 66666654 3 999999997542 3567788999999999999988763 12 4
Q ss_pred ceEEEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----C
Q psy6053 239 ELFVHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----N 314 (614)
Q Consensus 239 k~~V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~ 314 (614)
.++|++||.++..... ....|+.||+..|.+++.... .
T Consensus 145 g~iv~isS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~ 186 (264)
T 2pd6_A 145 GSIINISSIVGKVGNV--------------------------------------GQTNYAASKAGVIGLTQTAARELGRH 186 (264)
T ss_dssp EEEEEECCTHHHHCCT--------------------------------------TBHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred ceEEEECChhhccCCC--------------------------------------CChhhHHHHHHHHHHHHHHHHHhhhc
Confidence 6899999986532210 015799999999888877654 5
Q ss_pred CCCEEEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCc
Q psy6053 315 GMPCLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQ 394 (614)
Q Consensus 315 glp~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~ 394 (614)
|++++++|||.|+++.....+. .+...+..+ .....+.+++|+|++++.++..... ...+
T Consensus 187 gi~v~~v~Pg~v~t~~~~~~~~---------~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~~~~~~--~~~G 246 (264)
T 2pd6_A 187 GIRCNSVLPGFIATPMTQKVPQ---------KVVDKITEM---------IPMGHLGDPEDVADVVAFLASEDSG--YITG 246 (264)
T ss_dssp TEEEEEEEECSBCSCC-------------------CTGGG---------CTTCSCBCHHHHHHHHHHHHSGGGT--TCCS
T ss_pred CeEEEEEeeecccccchhhcCH---------HHHHHHHHh---------CCCCCCCCHHHHHHHHHHHcCCccc--CCCC
Confidence 8999999999998875321110 011001111 0112467899999999988865331 1367
Q ss_pred cEEEeccCCcccccHHH
Q psy6053 395 SIVHLTSSQEWQVSWQE 411 (614)
Q Consensus 395 ~vyni~~~~~~~it~~e 411 (614)
.++++.++ ..+++..
T Consensus 247 ~~~~v~gg--~~~~~~~ 261 (264)
T 2pd6_A 247 TSVEVTGG--LFMAENL 261 (264)
T ss_dssp CEEEESTT--C------
T ss_pred CEEEECCC--ceecccc
Confidence 89999888 5555444
No 100
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=99.80 E-value=7.1e-19 Score=174.98 Aligned_cols=218 Identities=15% Similarity=0.216 Sum_probs=154.0
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
+++|+|+||||||+||++++++|++.|++ |+++.|+. ++++++.+ ...+++++.+|+
T Consensus 5 l~~k~vlITGasggiG~~~a~~l~~~G~~---V~~~~r~~------~~~~~~~~--------------~~~~~~~~~~D~ 61 (244)
T 3d3w_A 5 LAGRRVLVTGAGKGIGRGTVQALHATGAR---VVAVSRTQ------ADLDSLVR--------------ECPGIEPVCVDL 61 (244)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCE---EEEEESCH------HHHHHHHH--------------HSTTCEEEECCT
T ss_pred cCCcEEEEECCCcHHHHHHHHHHHHCCCE---EEEEeCCH------HHHHHHHH--------------HcCCCCEEEEeC
Confidence 56899999999999999999999999875 88888863 23332211 112456779999
Q ss_pred CCCCCCCCHHHHHHHhc---cccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHHc---CC-CceEEEEe
Q psy6053 180 EADELAIKESDRQLLAS---EVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKEM---KH-LELFVHIS 245 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~---~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~-~k~~V~vS 245 (614)
++++ +++.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++... .+ ..++|++|
T Consensus 62 ~~~~------~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~s 135 (244)
T 3d3w_A 62 GDWE------ATERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVS 135 (244)
T ss_dssp TCHH------HHHHHHTTCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEEC
T ss_pred CCHH------HHHHHHHHcCCCCEEEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeC
Confidence 9865 7777775 58999999996532 3456788999999999998887652 13 57899999
Q ss_pred CceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCCEEEe
Q psy6053 246 TAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMPCLML 321 (614)
Q Consensus 246 T~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp~~Iv 321 (614)
|..+..... ....|+.||+..|.+++..+. .|++++++
T Consensus 136 S~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v 177 (244)
T 3d3w_A 136 SQCSQRAVT--------------------------------------NHSVYCSTKGALDMLTKVMALELGPHKIRVNAV 177 (244)
T ss_dssp CGGGTSCCT--------------------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred chhhccCCC--------------------------------------CCchHHHHHHHHHHHHHHHHHHhcccCeEEEEE
Confidence 986543210 015799999999999987654 48999999
Q ss_pred ecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEecc
Q psy6053 322 RPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLTS 401 (614)
Q Consensus 322 Rp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~~ 401 (614)
|||.|.++.... .|.+ + ........+ ....++++++|+|++++.++..... ...+++|++.+
T Consensus 178 ~Pg~v~t~~~~~--~~~~----~-~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~~~~~~--~~~G~~~~v~g 239 (244)
T 3d3w_A 178 NPTVVMTSMGQA--TWSD----P-HKAKTMLNR---------IPLGKFAEVEHVVNAILFLLSDRSG--MTTGSTLPVEG 239 (244)
T ss_dssp EECCBTTTTHHH--HSCS----T-THHHHHHHT---------CTTCSCBCHHHHHHHHHHHHSGGGT--TCCSCEEEEST
T ss_pred Eeccccccchhh--hccC----h-HHHHHHHhh---------CCCCCCcCHHHHHHHHHHHcCcccc--CCCCCEEEECC
Confidence 999998764210 0000 0 011111111 1123678999999999998865431 12578999987
Q ss_pred C
Q psy6053 402 S 402 (614)
Q Consensus 402 ~ 402 (614)
+
T Consensus 240 G 240 (244)
T 3d3w_A 240 G 240 (244)
T ss_dssp T
T ss_pred C
Confidence 7
No 101
>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}
Probab=99.80 E-value=9.3e-20 Score=176.52 Aligned_cols=186 Identities=13% Similarity=0.136 Sum_probs=139.8
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCCCC
Q psy6053 103 KTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAEAD 182 (614)
Q Consensus 103 ~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~~~ 182 (614)
|+|+||||||+||++++++|+++ +|+++.|+. ++++++.+ + . .. .++.+|++++
T Consensus 1 k~vlVtGasg~iG~~la~~l~~~-----~V~~~~r~~------~~~~~~~~---------~----~-~~-~~~~~D~~~~ 54 (207)
T 2yut_A 1 MRVLITGATGGLGGAFARALKGH-----DLLLSGRRA------GALAELAR---------E----V-GA-RALPADLADE 54 (207)
T ss_dssp CEEEEETTTSHHHHHHHHHTTTS-----EEEEECSCH------HHHHHHHH---------H----H-TC-EECCCCTTSH
T ss_pred CEEEEEcCCcHHHHHHHHHHHhC-----CEEEEECCH------HHHHHHHH---------h----c-cC-cEEEeeCCCH
Confidence 57999999999999999999987 489999863 22222211 0 1 12 7889999986
Q ss_pred CCCCCHHHHHHHhc---cccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEeCceeccC
Q psy6053 183 ELAIKESDRQLLAS---EVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKEMKHLELFVHISTAYCHLQ 252 (614)
Q Consensus 183 ~lGLs~~~~~~l~~---~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vST~~~~~~ 252 (614)
+ +++.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++++ .+.+++|++||..++..
T Consensus 55 ~------~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~-~~~~~iv~~sS~~~~~~ 127 (207)
T 2yut_A 55 L------EAKALLEEAGPLDLLVHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARF-QKGARAVFFGAYPRYVQ 127 (207)
T ss_dssp H------HHHHHHHHHCSEEEEEECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCE-EEEEEEEEECCCHHHHS
T ss_pred H------HHHHHHHhcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHh-cCCcEEEEEcChhhccC
Confidence 5 7888877 89999999997532 245677899999999999999965 46789999999976432
Q ss_pred CcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCCEEEeecceeec
Q psy6053 253 EKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMPCLMLRPSIIIP 328 (614)
Q Consensus 253 ~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp~~IvRp~~I~g 328 (614)
.. ....|+.||+..|.+++.... .|++++++|||.+++
T Consensus 128 ~~--------------------------------------~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~t 169 (207)
T 2yut_A 128 VP--------------------------------------GFAAYAAAKGALEAYLEAARKELLREGVHLVLVRLPAVAT 169 (207)
T ss_dssp ST--------------------------------------TBHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEECCCCBCS
T ss_pred CC--------------------------------------CcchHHHHHHHHHHHHHHHHHHHhhhCCEEEEEecCcccC
Confidence 10 015799999999999887654 489999999999977
Q ss_pred ccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhh
Q psy6053 329 VWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYL 387 (614)
Q Consensus 329 ~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~ 387 (614)
+... +.+....++++++|+|++++.++.++.
T Consensus 170 ~~~~----------------------------~~~~~~~~~~~~~dva~~~~~~~~~~~ 200 (207)
T 2yut_A 170 GLWA----------------------------PLGGPPKGALSPEEAARKVLEGLFREP 200 (207)
T ss_dssp GGGG----------------------------GGTSCCTTCBCHHHHHHHHHHHHC--C
T ss_pred CCcc----------------------------ccCCCCCCCCCHHHHHHHHHHHHhCCC
Confidence 5310 112233678999999999999886543
No 102
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=99.80 E-value=1.2e-18 Score=174.54 Aligned_cols=221 Identities=13% Similarity=0.160 Sum_probs=155.6
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEcc-CCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQ-KKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGD 178 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~-~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gD 178 (614)
+++|+|+||||||+||++++++|++.|++ |+++.|. ... . +.+.+. ++. ...++.++.+|
T Consensus 5 l~~k~vlVTGasggiG~~~a~~l~~~G~~---V~~~~r~~~~~--~-~~~~~~--------~~~-----~~~~~~~~~~D 65 (258)
T 3afn_B 5 LKGKRVLITGSSQGIGLATARLFARAGAK---VGLHGRKAPAN--I-DETIAS--------MRA-----DGGDAAFFAAD 65 (258)
T ss_dssp GTTCEEEETTCSSHHHHHHHHHHHHTTCE---EEEEESSCCTT--H-HHHHHH--------HHH-----TTCEEEEEECC
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCE---EEEECCCchhh--H-HHHHHH--------HHh-----cCCceEEEECC
Confidence 56899999999999999999999999876 8899997 332 1 112111 110 23578999999
Q ss_pred CCCCCCCCCHHHHHHHhc-------cccEEEEcccc-cC---h----hHHHHHHHHHhHHHHHHHHHHHHHc---CC--C
Q psy6053 179 AEADELAIKESDRQLLAS-------EVDIMIHGAAT-IR---F----DEALKKAVLLNTRGTKMMLSLAKEM---KH--L 238 (614)
Q Consensus 179 l~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~-v~---~----~~~~~~~~~~Nv~gt~~ll~la~~~---~~--~ 238 (614)
+++++ +++.+++ ++|+|||+||. .. + .+.++..+++|+.|+.++++.+... .+ .
T Consensus 66 ~~~~~------~~~~~~~~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ 139 (258)
T 3afn_B 66 LATSE------ACQQLVDEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKAS 139 (258)
T ss_dssp TTSHH------HHHHHHHHHHHHHSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHH------HHHHHHHHHHHHcCCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCC
Confidence 99865 6777766 79999999996 22 1 2456778999999999998876531 11 2
Q ss_pred ---ceEEEEeCceecc-CCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh-
Q psy6053 239 ---ELFVHISTAYCHL-QEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN- 313 (614)
Q Consensus 239 ---k~~V~vST~~~~~-~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~- 313 (614)
.++|++||.++.. .. ++ ...|+.||+..|.+++....
T Consensus 140 ~~~~~iv~~sS~~~~~~~~---------~~-----------------------------~~~Y~~sK~a~~~~~~~~~~e 181 (258)
T 3afn_B 140 GQTSAVISTGSIAGHTGGG---------PG-----------------------------AGLYGAAKAFLHNVHKNWVDF 181 (258)
T ss_dssp TSCEEEEEECCTHHHHCCC---------TT-----------------------------CHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEecchhhccCCC---------CC-----------------------------chHHHHHHHHHHHHHHHHHHh
Confidence 6899999987643 11 00 15799999999999887654
Q ss_pred ---CCCCEEEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcC
Q psy6053 314 ---NGMPCLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQK 390 (614)
Q Consensus 314 ---~glp~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~ 390 (614)
.|++++++|||.|.++..... . ..+...+..+. ....+++++|+|++++.++..... .
T Consensus 182 ~~~~gi~v~~v~Pg~v~t~~~~~~--------~-~~~~~~~~~~~---------~~~~~~~~~dva~~~~~l~~~~~~-~ 242 (258)
T 3afn_B 182 HTKDGVRFNIVSPGTVDTAFHADK--------T-QDVRDRISNGI---------PMGRFGTAEEMAPAFLFFASHLAS-G 242 (258)
T ss_dssp HGGGTEEEEEEEECSBSSGGGTTC--------C-HHHHHHHHTTC---------TTCSCBCGGGTHHHHHHHHCHHHH-T
T ss_pred hcccCeEEEEEeCCCccccccccc--------C-HHHHHHHhccC---------CCCcCCCHHHHHHHHHHHhCcchh-c
Confidence 489999999999988754211 1 12222222221 123688999999999988865421 0
Q ss_pred CCCccEEEeccC
Q psy6053 391 EHRQSIVHLTSS 402 (614)
Q Consensus 391 ~~~~~vyni~~~ 402 (614)
...+++|++.++
T Consensus 243 ~~~G~~~~v~gg 254 (258)
T 3afn_B 243 YITGQVLDINGG 254 (258)
T ss_dssp TCCSEEEEESTT
T ss_pred cccCCEEeECCC
Confidence 025789999877
No 103
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=99.79 E-value=1.7e-19 Score=181.48 Aligned_cols=225 Identities=15% Similarity=0.152 Sum_probs=156.6
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
+++|+||||||+|+||++++++|++.|.+ |+++.|+. +++++..+ + ...++.++.+|+
T Consensus 6 l~~k~vlVTGas~gIG~~ia~~l~~~G~~---V~~~~r~~------~~~~~~~~---------~----~~~~~~~~~~D~ 63 (259)
T 4e6p_A 6 LEGKSALITGSARGIGRAFAEAYVREGAT---VAIADIDI------ERARQAAA---------E----IGPAAYAVQMDV 63 (259)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTCE---EEEEESCH------HHHHHHHH---------H----HCTTEEEEECCT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEeCCH------HHHHHHHH---------H----hCCCceEEEeeC
Confidence 57899999999999999999999999876 88888853 23332211 0 224678999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHHc----CCCceE
Q psy6053 180 EADELAIKESDRQLLAS-------EVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKEM----KHLELF 241 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~----~~~k~~ 241 (614)
++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++.+... +.-.++
T Consensus 64 ~~~~------~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~i 137 (259)
T 4e6p_A 64 TRQD------SIDAAIAATVEHAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKI 137 (259)
T ss_dssp TCHH------HHHHHHHHHHHHSSSCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEE
Confidence 9976 6776665 79999999997532 3567788999999999999988652 114589
Q ss_pred EEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCC
Q psy6053 242 VHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMP 317 (614)
Q Consensus 242 V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp 317 (614)
|++||..+..... ....|+.||+..|.+.+..+. +|++
T Consensus 138 v~isS~~~~~~~~--------------------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~ 179 (259)
T 4e6p_A 138 INMASQAGRRGEA--------------------------------------LVAIYCATKAAVISLTQSAGLDLIKHRIN 179 (259)
T ss_dssp EEECCGGGTSCCT--------------------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred EEECChhhccCCC--------------------------------------CChHHHHHHHHHHHHHHHHHHHhhhcCCE
Confidence 9999987643210 015799999999999887664 5899
Q ss_pred EEEeecceeecccCCCCccccCCCCchHHHHHHHhc---CceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCc
Q psy6053 318 CLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGK---GVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQ 394 (614)
Q Consensus 318 ~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~---g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~ 394 (614)
+.+++||.|.++.... ...++..... +.......+......+.+++|+|++++.++..... -..+
T Consensus 180 vn~v~PG~v~t~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~L~s~~~~--~itG 247 (259)
T 4e6p_A 180 VNAIAPGVVDGEHWDG----------VDALFARYENRPRGEKKRLVGEAVPFGRMGTAEDLTGMAIFLASAESD--YIVS 247 (259)
T ss_dssp EEEEEECCBCSTTHHH----------HHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCTHHHHHHHHHTTSGGGT--TCCS
T ss_pred EEEEEECCCccchhhh----------hhhhhhhhccCChHHHHHHHhccCCCCCCcCHHHHHHHHHHHhCCccC--CCCC
Confidence 9999999998763211 0011111110 00000111223345688999999999888754432 1358
Q ss_pred cEEEeccC
Q psy6053 395 SIVHLTSS 402 (614)
Q Consensus 395 ~vyni~~~ 402 (614)
++|++.++
T Consensus 248 ~~i~vdgG 255 (259)
T 4e6p_A 248 QTYNVDGG 255 (259)
T ss_dssp CEEEESTT
T ss_pred CEEEECcC
Confidence 89999887
No 104
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=99.79 E-value=6.2e-19 Score=178.37 Aligned_cols=229 Identities=16% Similarity=0.137 Sum_probs=155.9
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
+++|+|+||||||+||++++++|++.|++ |+++.|... ++++++.+ .++. ...++.++.+|+
T Consensus 19 ~~~k~vlItGasggiG~~la~~l~~~G~~---v~~~~r~~~-----~~~~~~~~-----~l~~-----~~~~~~~~~~D~ 80 (274)
T 1ja9_A 19 LAGKVALTTGAGRGIGRGIAIELGRRGAS---VVVNYGSSS-----KAAEEVVA-----ELKK-----LGAQGVAIQADI 80 (274)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCE---EEEEESSCH-----HHHHHHHH-----HHHH-----TTCCEEEEECCT
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCE---EEEEcCCch-----HHHHHHHH-----HHHh-----cCCcEEEEEecC
Confidence 57899999999999999999999999865 888888421 22222110 1111 235688999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHHc-CCCceEEEE
Q psy6053 180 EADELAIKESDRQLLAS-------EVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKEM-KHLELFVHI 244 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~-~~~k~~V~v 244 (614)
++++ +++.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++... .+-.++|++
T Consensus 81 ~~~~------~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~ 154 (274)
T 1ja9_A 81 SKPS------EVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILT 154 (274)
T ss_dssp TSHH------HHHHHHHHHHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCEEEEE
Confidence 9865 6776665 78999999996532 3456778999999999999998773 111689999
Q ss_pred eCceec-cCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCCEE
Q psy6053 245 STAYCH-LQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMPCL 319 (614)
Q Consensus 245 ST~~~~-~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp~~ 319 (614)
||..+. ... | ....|+.||+..|.+++.... .|++++
T Consensus 155 sS~~~~~~~~----------~----------------------------~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~ 196 (274)
T 1ja9_A 155 SSIAAVMTGI----------P----------------------------NHALYAGSKAAVEGFCRAFAVDCGAKGVTVN 196 (274)
T ss_dssp CCGGGTCCSC----------C----------------------------SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEE
T ss_pred cChHhccCCC----------C----------------------------CCchHHHHHHHHHHHHHHHHHHhhhcCeEEE
Confidence 998764 211 0 015799999999999887654 489999
Q ss_pred EeecceeecccCCCC-----ccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCc
Q psy6053 320 MLRPSIIIPVWREPL-----PGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQ 394 (614)
Q Consensus 320 IvRp~~I~g~~~~p~-----~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~ 394 (614)
++|||.|.++...+. +...... ........... .....++++++|+|++++.++..... ...+
T Consensus 197 ~v~Pg~v~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---------~~~~~~~~~~~dva~~i~~l~~~~~~--~~~G 264 (274)
T 1ja9_A 197 CIAPGGVKTDMFDENSWHYAPGGYKGM-PQEKIDEGLAN---------MNPLKRIGYPADIGRAVSALCQEESE--WING 264 (274)
T ss_dssp EEEECCBSSHHHHHHGGGTSTTCCTTC-CHHHHHHHHHH---------TSTTSSCBCHHHHHHHHHHHHSGGGT--TCCS
T ss_pred EEeeCcccccchhcccccccccccccC-chHHHHHHHHh---------cCCCCCccCHHHHHHHHHHHhCcccc--cccC
Confidence 999999977632110 0000000 00111111111 12234688999999999988865431 1257
Q ss_pred cEEEeccC
Q psy6053 395 SIVHLTSS 402 (614)
Q Consensus 395 ~vyni~~~ 402 (614)
++|+++++
T Consensus 265 ~~~~v~gG 272 (274)
T 1ja9_A 265 QVIKLTGG 272 (274)
T ss_dssp CEEEESTT
T ss_pred cEEEecCC
Confidence 89999876
No 105
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=99.79 E-value=8.8e-19 Score=176.74 Aligned_cols=220 Identities=15% Similarity=0.128 Sum_probs=142.8
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
+++|+|+||||||+||++++++|++.|++ |+++.|+.. ++++..+ .+.. ...++.++.+|+
T Consensus 12 l~~k~vlITGasggiG~~la~~l~~~G~~---V~~~~r~~~------~~~~~~~-----~~~~-----~~~~~~~~~~D~ 72 (266)
T 1xq1_A 12 LKAKTVLVTGGTKGIGHAIVEEFAGFGAV---IHTCARNEY------ELNECLS-----KWQK-----KGFQVTGSVCDA 72 (266)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCE---EEEEESCHH------HHHHHHH-----HHHH-----TTCCEEEEECCT
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEeCCHH------HHHHHHH-----HHHh-----cCCeeEEEECCC
Confidence 56899999999999999999999999875 888888632 2222111 1111 224688999999
Q ss_pred CCCCCCCCHHHHHHHh--------ccccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHH----HcCCCce
Q psy6053 180 EADELAIKESDRQLLA--------SEVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAK----EMKHLEL 240 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~--------~~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~----~~~~~k~ 240 (614)
++++ +++.++ .++|+|||+||.... .+.++..+++|+.|+.++++++. + .+.++
T Consensus 73 ~~~~------~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~-~~~~~ 145 (266)
T 1xq1_A 73 SLRP------EREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKA-SGCGN 145 (266)
T ss_dssp TSHH------HHHHHHHHHHHHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HSSCE
T ss_pred CCHH------HHHHHHHHHHHHhCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh-cCCcE
Confidence 9865 666665 568999999996532 34567789999999999999883 4 35789
Q ss_pred EEEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCC
Q psy6053 241 FVHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGM 316 (614)
Q Consensus 241 ~V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~gl 316 (614)
+|++||..+..... ....|+.||+..|.+++.... .|+
T Consensus 146 iv~isS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi 187 (266)
T 1xq1_A 146 IIFMSSIAGVVSAS--------------------------------------VGSIYSATKGALNQLARNLACEWASDGI 187 (266)
T ss_dssp EEEEC------------------------------------------------CCHHHHHHHHHHHHHHHHHHHHGGGTC
T ss_pred EEEEccchhccCCC--------------------------------------CCchHHHHHHHHHHHHHHHHHHHhHhCc
Confidence 99999986643210 015799999999999887654 489
Q ss_pred CEEEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccE
Q psy6053 317 PCLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSI 396 (614)
Q Consensus 317 p~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~v 396 (614)
+++++|||.|+++...... . ..+....... .....+++++|+|++++.++..... ...+++
T Consensus 188 ~v~~v~Pg~v~t~~~~~~~-------~-~~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~~~~~~--~~~G~~ 248 (266)
T 1xq1_A 188 RANAVAPAVIATPLAEAVY-------D-DEFKKVVISR---------KPLGRFGEPEEVSSLVAFLCMPAAS--YITGQT 248 (266)
T ss_dssp EEEEEECCSCC------------------------------------------CCGGGGHHHHHHHTSGGGT--TCCSCE
T ss_pred EEEEEeeCCCccchhhhhc-------C-HHHHHHHHhc---------CCCCCCcCHHHHHHHHHHHcCcccc--CccCcE
Confidence 9999999999887532110 0 0010001110 0112467899999999988754321 125789
Q ss_pred EEeccC
Q psy6053 397 VHLTSS 402 (614)
Q Consensus 397 yni~~~ 402 (614)
+++.++
T Consensus 249 ~~v~gG 254 (266)
T 1xq1_A 249 ICVDGG 254 (266)
T ss_dssp EECCCC
T ss_pred EEEcCC
Confidence 999887
No 106
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=99.79 E-value=6.5e-19 Score=175.53 Aligned_cols=220 Identities=14% Similarity=0.128 Sum_probs=151.6
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
+++|+|+||||||+||++++++|++.|++ |+++.|+.. +++++.+ .+... ...++.++.+|+
T Consensus 5 ~~~~~vlVtGasggiG~~la~~l~~~G~~---V~~~~r~~~------~~~~~~~-----~~~~~----~~~~~~~~~~D~ 66 (248)
T 2pnf_A 5 LQGKVSLVTGSTRGIGRAIAEKLASAGST---VIITGTSGE------RAKAVAE-----EIANK----YGVKAHGVEMNL 66 (248)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCE---EEEEESSHH------HHHHHHH-----HHHHH----HCCCEEEEECCT
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCE---EEEEeCChH------HHHHHHH-----HHHhh----cCCceEEEEccC
Confidence 56899999999999999999999999875 889998632 2222110 11100 124688999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHH----HHcCCCceE
Q psy6053 180 EADELAIKESDRQLLAS-------EVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLA----KEMKHLELF 241 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la----~~~~~~k~~ 241 (614)
++++ +++.+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+ ++ .+.+++
T Consensus 67 ~~~~------~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-~~~~~i 139 (248)
T 2pnf_A 67 LSEE------SINKAFEEIYNLVDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIK-QRWGRI 139 (248)
T ss_dssp TCHH------HHHHHHHHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHH-HTCEEE
T ss_pred CCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHh-cCCcEE
Confidence 9865 6777765 79999999997542 3456788999999997666554 34 356899
Q ss_pred EEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCC
Q psy6053 242 VHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMP 317 (614)
Q Consensus 242 V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp 317 (614)
|++||..+..... ....|+.||+..|.+.+.... .|++
T Consensus 140 v~~sS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~ 181 (248)
T 2pnf_A 140 VNISSVVGFTGNV--------------------------------------GQVNYSTTKAGLIGFTKSLAKELAPRNVL 181 (248)
T ss_dssp EEECCHHHHHCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred EEEccHHhcCCCC--------------------------------------CCchHHHHHHHHHHHHHHHHHHhcccCeE
Confidence 9999985432110 015799999999988877654 4899
Q ss_pred EEEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEE
Q psy6053 318 CLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIV 397 (614)
Q Consensus 318 ~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vy 397 (614)
++++|||.+.++.... . . .........+. ....+++++|+|++++.++..... ...+++|
T Consensus 182 v~~v~Pg~v~t~~~~~-------~-~-~~~~~~~~~~~---------~~~~~~~~~dva~~~~~l~~~~~~--~~~G~~~ 241 (248)
T 2pnf_A 182 VNAVAPGFIETDMTAV-------L-S-EEIKQKYKEQI---------PLGRFGSPEEVANVVLFLCSELAS--YITGEVI 241 (248)
T ss_dssp EEEEEECSBCCGGGGG-------S-C-HHHHHHHHHTC---------TTSSCBCHHHHHHHHHHHHSGGGT--TCCSCEE
T ss_pred EEEEEeceecCchhhh-------c-c-HHHHHHHHhcC---------CCCCccCHHHHHHHHHHHhCchhh--cCCCcEE
Confidence 9999999998764321 1 1 11111111111 113478999999999988865321 1357899
Q ss_pred EeccC
Q psy6053 398 HLTSS 402 (614)
Q Consensus 398 ni~~~ 402 (614)
++.++
T Consensus 242 ~v~gg 246 (248)
T 2pnf_A 242 HVNGG 246 (248)
T ss_dssp EESTT
T ss_pred EeCCC
Confidence 99876
No 107
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}
Probab=99.79 E-value=2.4e-19 Score=173.13 Aligned_cols=184 Identities=13% Similarity=0.141 Sum_probs=139.4
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCCCC
Q psy6053 103 KTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAEAD 182 (614)
Q Consensus 103 ~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~~~ 182 (614)
|+|+||||||+||++++++|+ +|++ |+++.|... .+.+|++++
T Consensus 4 M~vlVtGasg~iG~~~~~~l~-~g~~---V~~~~r~~~---------------------------------~~~~D~~~~ 46 (202)
T 3d7l_A 4 MKILLIGASGTLGSAVKERLE-KKAE---VITAGRHSG---------------------------------DVTVDITNI 46 (202)
T ss_dssp CEEEEETTTSHHHHHHHHHHT-TTSE---EEEEESSSS---------------------------------SEECCTTCH
T ss_pred cEEEEEcCCcHHHHHHHHHHH-CCCe---EEEEecCcc---------------------------------ceeeecCCH
Confidence 489999999999999999999 8865 888888642 367899986
Q ss_pred CCCCCHHHHHHHhcc---ccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHHc-CCCceEEEEeCceecc
Q psy6053 183 ELAIKESDRQLLASE---VDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKEM-KHLELFVHISTAYCHL 251 (614)
Q Consensus 183 ~lGLs~~~~~~l~~~---vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~-~~~k~~V~vST~~~~~ 251 (614)
+ +++.++++ +|+|||+||.... .+.++..+++|+.|+.++++++... .+-.++|++||.++..
T Consensus 47 ~------~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~ 120 (202)
T 3d7l_A 47 D------SIKKMYEQVGKVDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDKGSFTLTTGIMMED 120 (202)
T ss_dssp H------HHHHHHHHHCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEEEEEEEECCGGGTS
T ss_pred H------HHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccCCEEEEEcchhhcC
Confidence 5 77777765 8999999996431 2456678899999999999999873 1126899999986532
Q ss_pred CCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh---CCCCEEEeecceeec
Q psy6053 252 QEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN---NGMPCLMLRPSIIIP 328 (614)
Q Consensus 252 ~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~---~glp~~IvRp~~I~g 328 (614)
... ....|+.||...|.+++.... .|++++++|||.+++
T Consensus 121 ~~~--------------------------------------~~~~Y~~sK~~~~~~~~~~~~e~~~gi~v~~v~pg~v~~ 162 (202)
T 3d7l_A 121 PIV--------------------------------------QGASAAMANGAVTAFAKSAAIEMPRGIRINTVSPNVLEE 162 (202)
T ss_dssp CCT--------------------------------------TCHHHHHHHHHHHHHHHHHTTSCSTTCEEEEEEECCBGG
T ss_pred CCC--------------------------------------ccHHHHHHHHHHHHHHHHHHHHccCCeEEEEEecCccCC
Confidence 210 015799999999999998775 389999999999977
Q ss_pred ccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEe
Q psy6053 329 VWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHL 399 (614)
Q Consensus 329 ~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni 399 (614)
+... .. +.....++++++|+|++++.++.. . ..+++||+
T Consensus 163 ~~~~------------------~~---------~~~~~~~~~~~~dva~~~~~~~~~-~----~~G~~~~v 201 (202)
T 3d7l_A 163 SWDK------------------LE---------PFFEGFLPVPAAKVARAFEKSVFG-A----QTGESYQV 201 (202)
T ss_dssp GHHH------------------HG---------GGSTTCCCBCHHHHHHHHHHHHHS-C----CCSCEEEE
T ss_pred chhh------------------hh---------hhccccCCCCHHHHHHHHHHhhhc-c----ccCceEec
Confidence 6310 01 112245689999999998887732 2 25778886
No 108
>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=99.79 E-value=8.1e-19 Score=174.05 Aligned_cols=205 Identities=15% Similarity=0.164 Sum_probs=150.9
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCCC
Q psy6053 102 GKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAEA 181 (614)
Q Consensus 102 ~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~~ 181 (614)
+|+|+||||||+||++++++|+++|++ |+++.|+... +++.++.+|+++
T Consensus 2 ~k~vlVtGasggiG~~la~~l~~~G~~---V~~~~r~~~~----------------------------~~~~~~~~D~~~ 50 (242)
T 1uay_A 2 ERSALVTGGASGLGRAAALALKARGYR---VVVLDLRREG----------------------------EDLIYVEGDVTR 50 (242)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCE---EEEEESSCCS----------------------------SSSEEEECCTTC
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCE---EEEEccCccc----------------------------cceEEEeCCCCC
Confidence 689999999999999999999999876 8899987541 235789999998
Q ss_pred CCCCCCHHHHHHHhc------cccEEEEcccccChh-----------HHHHHHHHHhHHHHHHHHHHHHHc-CC------
Q psy6053 182 DELAIKESDRQLLAS------EVDIMIHGAATIRFD-----------EALKKAVLLNTRGTKMMLSLAKEM-KH------ 237 (614)
Q Consensus 182 ~~lGLs~~~~~~l~~------~vd~ViH~AA~v~~~-----------~~~~~~~~~Nv~gt~~ll~la~~~-~~------ 237 (614)
++ +++++++ ++|+|||+||..... +.++..+++|+.|+.++++++... ..
T Consensus 51 ~~------~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~ 124 (242)
T 1uay_A 51 EE------DVRRAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAE 124 (242)
T ss_dssp HH------HHHHHHHHHHHHSCEEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTT
T ss_pred HH------HHHHHHHHHHhhCCceEEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCC
Confidence 65 7777776 789999999965321 267788999999999999988763 11
Q ss_pred --CceEEEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh--
Q psy6053 238 --LELFVHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN-- 313 (614)
Q Consensus 238 --~k~~V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~-- 313 (614)
..++|++||..+..... ....|+.||+..|.+++....
T Consensus 125 ~~~~~iv~~sS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~~~l~~e~ 166 (242)
T 1uay_A 125 GQRGVIVNTASVAAFEGQI--------------------------------------GQAAYAASKGGVVALTLPAAREL 166 (242)
T ss_dssp SCSEEEEEECCTHHHHCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEeCChhhccCCC--------------------------------------CCchhhHHHHHHHHHHHHHHHHH
Confidence 13899999997643211 015799999999988876654
Q ss_pred --CCCCEEEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCC
Q psy6053 314 --NGMPCLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKE 391 (614)
Q Consensus 314 --~glp~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~ 391 (614)
.|++++++|||.|+++..... +..+......+.. ....+++++|+|++++.++....
T Consensus 167 ~~~gi~v~~v~Pg~v~t~~~~~~---------~~~~~~~~~~~~~--------~~~~~~~~~dva~~~~~l~~~~~---- 225 (242)
T 1uay_A 167 AGWGIRVVTVAPGLFDTPLLQGL---------PEKAKASLAAQVP--------FPPRLGRPEEYAALVLHILENPM---- 225 (242)
T ss_dssp GGGTEEEEEEEECSCSSHHHHTS---------CHHHHHHHHTTCC--------SSCSCCCHHHHHHHHHHHHHCTT----
T ss_pred hhcCcEEEEEEeccCcchhhhcc---------chhHHHHHHhhCC--------CcccCCCHHHHHHHHHHHhcCCC----
Confidence 489999999999988643211 1111222222210 00236789999999999887632
Q ss_pred CCccEEEeccC
Q psy6053 392 HRQSIVHLTSS 402 (614)
Q Consensus 392 ~~~~vyni~~~ 402 (614)
..+++|++.++
T Consensus 226 ~~G~~~~v~gG 236 (242)
T 1uay_A 226 LNGEVVRLDGA 236 (242)
T ss_dssp CCSCEEEESTT
T ss_pred CCCcEEEEcCC
Confidence 36889999887
No 109
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=99.79 E-value=2.8e-18 Score=172.69 Aligned_cols=228 Identities=11% Similarity=0.070 Sum_probs=155.7
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
+++|+|+||||||+||++++++|++.|++ |+++.|+.... .+.++++. .+ ...++.++.+|+
T Consensus 12 ~~~k~vlITGasggiG~~~a~~l~~~G~~---V~~~~r~~~~~--~~~~~~l~---------~~----~~~~~~~~~~Dl 73 (265)
T 1h5q_A 12 FVNKTIIVTGGNRGIGLAFTRAVAAAGAN---VAVIYRSAADA--VEVTEKVG---------KE----FGVKTKAYQCDV 73 (265)
T ss_dssp CTTEEEEEETTTSHHHHHHHHHHHHTTEE---EEEEESSCTTH--HHHHHHHH---------HH----HTCCEEEEECCT
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCe---EEEEeCcchhh--HHHHHHHH---------Hh----cCCeeEEEEeeC
Confidence 56899999999999999999999999865 89999965432 22222221 11 224688999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHHc----CCCceE
Q psy6053 180 EADELAIKESDRQLLAS-------EVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKEM----KHLELF 241 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~----~~~k~~ 241 (614)
++++ +++.+++ .+|+|||+||.... .+.++..+++|+.|+.++++++... +...++
T Consensus 74 ~~~~------~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~i 147 (265)
T 1h5q_A 74 SNTD------IVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSI 147 (265)
T ss_dssp TCHH------HHHHHHHHHHHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred CCHH------HHHHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceE
Confidence 9865 6666554 48999999997532 3456778999999999999988652 224789
Q ss_pred EEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCC
Q psy6053 242 VHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMP 317 (614)
Q Consensus 242 V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp 317 (614)
|++||..+......-.. +. .....|+.||+..|.+++.... .|++
T Consensus 148 v~~sS~~~~~~~~~~~~-----~~--------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~ 196 (265)
T 1h5q_A 148 VVTSSMSSQIINQSSLN-----GS--------------------------LTQVFYNSSKAACSNLVKGLAAEWASAGIR 196 (265)
T ss_dssp EEECCGGGTSCCEEETT-----EE--------------------------CSCHHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred EEeCCchhhcccccccc-----cc--------------------------ccccccHHHHHHHHHHHHHHHHHHHhcCcE
Confidence 99999865432110000 00 0125799999999999887654 4899
Q ss_pred EEEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEE
Q psy6053 318 CLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIV 397 (614)
Q Consensus 318 ~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vy 397 (614)
++++|||.|.++..... .+ .......... ....+++++|+|++++.++..... ...+++|
T Consensus 197 v~~v~Pg~v~t~~~~~~--------~~-~~~~~~~~~~---------~~~~~~~~~dva~~~~~l~~~~~~--~~~G~~~ 256 (265)
T 1h5q_A 197 VNALSPGYVNTDQTAHM--------DK-KIRDHQASNI---------PLNRFAQPEEMTGQAILLLSDHAT--YMTGGEY 256 (265)
T ss_dssp EEEEEECSBCCGGGGGS--------CH-HHHHHHHHTC---------TTSSCBCGGGGHHHHHHHHSGGGT--TCCSCEE
T ss_pred EEEEecCcccccccccc--------ch-hHHHHHHhcC---------cccCCCCHHHHHHHHHhhccCchh--cCcCcEE
Confidence 99999999987643210 11 1111111110 112367899999999988865431 1367899
Q ss_pred EeccC
Q psy6053 398 HLTSS 402 (614)
Q Consensus 398 ni~~~ 402 (614)
++.++
T Consensus 257 ~v~gG 261 (265)
T 1h5q_A 257 FIDGG 261 (265)
T ss_dssp EECTT
T ss_pred EecCC
Confidence 99887
No 110
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=99.79 E-value=7.6e-19 Score=178.97 Aligned_cols=245 Identities=16% Similarity=0.163 Sum_probs=167.9
Q ss_pred ccCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCC
Q psy6053 99 TFTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGD 178 (614)
Q Consensus 99 ~~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gD 178 (614)
.+++|+|+||||+|+||++++++|++.|.+ |+++.|... ++++..+ .++.. .. ...++.++.+|
T Consensus 8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~---V~~~~r~~~------~~~~~~~-----~l~~~-~~-~~~~~~~~~~D 71 (281)
T 3svt_A 8 SFQDRTYLVTGGGSGIGKGVAAGLVAAGAS---VMIVGRNPD------KLAGAVQ-----ELEAL-GA-NGGAIRYEPTD 71 (281)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCHH------HHHHHHH-----HHHTT-CC-SSCEEEEEECC
T ss_pred CcCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEeCCHH------HHHHHHH-----HHHHh-CC-CCceEEEEeCC
Confidence 467899999999999999999999999876 888888642 2222111 11111 11 12378999999
Q ss_pred CCCCCCCCCHHHHHHHhc-------cccEEEEcccccC----h----hHHHHHHHHHhHHHHHHHHHHHHHc---CCCce
Q psy6053 179 AEADELAIKESDRQLLAS-------EVDIMIHGAATIR----F----DEALKKAVLLNTRGTKMMLSLAKEM---KHLEL 240 (614)
Q Consensus 179 l~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~----~----~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~ 240 (614)
+++++ +++.+++ ++|++||+||... + .+.++..+++|+.|+.++++.+... .+-.+
T Consensus 72 v~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~ 145 (281)
T 3svt_A 72 ITNED------ETARAVDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGS 145 (281)
T ss_dssp TTSHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEE
T ss_pred CCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcE
Confidence 99976 6666655 5799999999621 1 3556788999999999999987652 23348
Q ss_pred EEEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCC
Q psy6053 241 FVHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGM 316 (614)
Q Consensus 241 ~V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~gl 316 (614)
+|++||..+..... ....|+.||+..|.+.+..+. +|+
T Consensus 146 iv~isS~~~~~~~~--------------------------------------~~~~Y~asK~a~~~l~~~la~e~~~~gi 187 (281)
T 3svt_A 146 FVGISSIAASNTHR--------------------------------------WFGAYGVTKSAVDHLMQLAADELGASWV 187 (281)
T ss_dssp EEEECCHHHHSCCT--------------------------------------TCTHHHHHHHHHHHHHHHHHHHHGGGTE
T ss_pred EEEEeCHHHcCCCC--------------------------------------CChhHHHHHHHHHHHHHHHHHHhhhcCe
Confidence 99999986543211 125899999999999887654 579
Q ss_pred CEEEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccE
Q psy6053 317 PCLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSI 396 (614)
Q Consensus 317 p~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~v 396 (614)
++..++||.|.++..... ............+. ....+..++|+|++++.++..... -..+++
T Consensus 188 ~vn~v~PG~v~t~~~~~~-------~~~~~~~~~~~~~~---------p~~r~~~~~dva~~~~~l~s~~~~--~itG~~ 249 (281)
T 3svt_A 188 RVNSIRPGLIRTDLVAAI-------TESAELSSDYAMCT---------PLPRQGEVEDVANMAMFLLSDAAS--FVTGQV 249 (281)
T ss_dssp EEEEEEECSBCSGGGHHH-------HTCHHHHHHHHHHC---------SSSSCBCHHHHHHHHHHHHSGGGT--TCCSCE
T ss_pred EEEEEEeCcCcCcchhhc-------ccCHHHHHHHHhcC---------CCCCCCCHHHHHHHHHHHhCcccC--CCCCCE
Confidence 999999999977642110 00011111111111 112356799999999988865432 136889
Q ss_pred EEeccCCccccc-HHHHHHHHhhhcccc
Q psy6053 397 VHLTSSQEWQVS-WQEIIDIGKSIVTTE 423 (614)
Q Consensus 397 yni~~~~~~~it-~~e~~~~~~~~~g~~ 423 (614)
+++.++ ..++ ..++.+.+.+.+|.+
T Consensus 250 ~~vdgG--~~~~~~~~~~~~~~~~~~~~ 275 (281)
T 3svt_A 250 INVDGG--QMLRRGPDFSAMLEPVFGRD 275 (281)
T ss_dssp EEESTT--GGGSCCCCCHHHHHHHHCTT
T ss_pred EEeCCC--hhcccCCcchhccccccCCc
Confidence 999888 5555 667888887776654
No 111
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=99.78 E-value=2.5e-18 Score=172.35 Aligned_cols=226 Identities=15% Similarity=0.178 Sum_probs=155.1
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
+++|+|+||||||+||++++++|++.|++ +|+++.|+... +.++++. +.. ...++.++.+|+
T Consensus 3 l~~k~vlVtGas~gIG~~~a~~l~~~G~~--~v~~~~r~~~~----~~~~~l~---------~~~---~~~~~~~~~~D~ 64 (254)
T 1sby_A 3 LTNKNVIFVAALGGIGLDTSRELVKRNLK--NFVILDRVENP----TALAELK---------AIN---PKVNITFHTYDV 64 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTCCS--EEEEEESSCCH----HHHHHHH---------HHC---TTSEEEEEECCT
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCc--EEEEEecCchH----HHHHHHH---------HhC---CCceEEEEEEec
Confidence 46899999999999999999999999875 37788887532 2222221 111 124789999999
Q ss_pred CCC-CCCCCHHHHHHHhc-------cccEEEEcccccChhHHHHHHHHHhHHHHHHHHHHHHHc-C-C----CceEEEEe
Q psy6053 180 EAD-ELAIKESDRQLLAS-------EVDIMIHGAATIRFDEALKKAVLLNTRGTKMMLSLAKEM-K-H----LELFVHIS 245 (614)
Q Consensus 180 ~~~-~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~-~-~----~k~~V~vS 245 (614)
+++ + +++.+++ ++|+|||+||... .+.++..+++|+.|+.++++++... . + ..++|++|
T Consensus 65 ~~~~~------~~~~~~~~~~~~~g~id~lv~~Ag~~~-~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~is 137 (254)
T 1sby_A 65 TVPVA------ESKKLLKKIFDQLKTVDILINGAGILD-DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANIC 137 (254)
T ss_dssp TSCHH------HHHHHHHHHHHHHSCCCEEEECCCCCC-TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEEC
T ss_pred CCChH------HHHHHHHHHHHhcCCCCEEEECCccCC-HHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEEC
Confidence 987 4 4555544 7899999999764 3556788999999999999988752 1 1 35799999
Q ss_pred CceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCCEEEe
Q psy6053 246 TAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMPCLML 321 (614)
Q Consensus 246 T~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp~~Iv 321 (614)
|..+..... ....|+.||+..|.+.+..+. .|++++++
T Consensus 138 S~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v 179 (254)
T 1sby_A 138 SVTGFNAIH--------------------------------------QVPVYSASKAAVVSFTNSLAKLAPITGVTAYSI 179 (254)
T ss_dssp CGGGTSCCT--------------------------------------TSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEE
T ss_pred chhhccCCC--------------------------------------CchHHHHHHHHHHHHHHHHHHHhccCCeEEEEE
Confidence 987643210 015799999999998877654 48999999
Q ss_pred ecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEecc
Q psy6053 322 RPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLTS 401 (614)
Q Consensus 322 Rp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~~ 401 (614)
+||.|.++.......|.+... .+..... ...+.+++|+|++++.++... ..+.+|++.+
T Consensus 180 ~Pg~v~t~~~~~~~~~~~~~~----~~~~~~~------------~~~~~~~~dvA~~i~~~~~~~-----~~G~~~~v~g 238 (254)
T 1sby_A 180 NPGITRTPLVHTFNSWLDVEP----RVAELLL------------SHPTQTSEQCGQNFVKAIEAN-----KNGAIWKLDL 238 (254)
T ss_dssp EECSEESHHHHSCCCGGGSCT----THHHHHT------------TSCCEEHHHHHHHHHHHHHHC-----CTTCEEEEET
T ss_pred ecCCccCccccccchhhhhhH----HHHHHHh------------cCCCCCHHHHHHHHHHHHHcC-----CCCCEEEEeC
Confidence 999998764322222211000 0011111 112348999999999888632 2688999988
Q ss_pred CCcccccH
Q psy6053 402 SQEWQVSW 409 (614)
Q Consensus 402 ~~~~~it~ 409 (614)
+...+++|
T Consensus 239 G~~~~~~~ 246 (254)
T 1sby_A 239 GTLEAIEW 246 (254)
T ss_dssp TEEEECCC
T ss_pred CceeEecc
Confidence 74344444
No 112
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=99.78 E-value=2.2e-18 Score=172.48 Aligned_cols=221 Identities=14% Similarity=0.139 Sum_probs=151.7
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeE-EEEeCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKV-LPISGD 178 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v-~~v~gD 178 (614)
+++|+|+||||||+||++++++|++.|++ |+++.|+. +++++..+ . ...++ .++.+|
T Consensus 9 ~~~k~vlITGasggiG~~la~~l~~~G~~---V~~~~r~~------~~~~~~~~-----~--------~~~~~~~~~~~D 66 (254)
T 2wsb_A 9 LDGACAAVTGAGSGIGLEICRAFAASGAR---LILIDREA------AALDRAAQ-----E--------LGAAVAARIVAD 66 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCH------HHHHHHHH-----H--------HGGGEEEEEECC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEeCCH------HHHHHHHH-----H--------hcccceeEEEEe
Confidence 56899999999999999999999999875 88999863 22222211 0 11345 889999
Q ss_pred CCCCCCCCCHHHHHHHh------ccccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHHc---CCCceEE
Q psy6053 179 AEADELAIKESDRQLLA------SEVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKEM---KHLELFV 242 (614)
Q Consensus 179 l~~~~lGLs~~~~~~l~------~~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~V 242 (614)
+++++ +++.++ .++|+|||+||.... .+.++..+++|+.|+.++++.+... .+.+++|
T Consensus 67 ~~~~~------~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv 140 (254)
T 2wsb_A 67 VTDAE------AMTAAAAEAEAVAPVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIV 140 (254)
T ss_dssp TTCHH------HHHHHHHHHHHHSCCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred cCCHH------HHHHHHHHHHhhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEE
Confidence 99865 666655 478999999996532 3556788999999977777655321 2568999
Q ss_pred EEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCCE
Q psy6053 243 HISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMPC 318 (614)
Q Consensus 243 ~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp~ 318 (614)
++||..+..... . .....|+.||+..|.+++.... .|+++
T Consensus 141 ~isS~~~~~~~~----------~--------------------------~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v 184 (254)
T 2wsb_A 141 NLGSMSGTIVNR----------P--------------------------QFASSYMASKGAVHQLTRALAAEWAGRGVRV 184 (254)
T ss_dssp EECCGGGTSCCS----------S--------------------------SCBHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred EEecchhccCCC----------C--------------------------CcchHHHHHHHHHHHHHHHHHHHHhhcCeEE
Confidence 999987643211 0 0015799999999999887654 48999
Q ss_pred EEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEE
Q psy6053 319 LMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVH 398 (614)
Q Consensus 319 ~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyn 398 (614)
+++|||.|+++.....+ ..+ ........+. ....+++++|+|++++.++..... ...+.+++
T Consensus 185 ~~v~Pg~v~t~~~~~~~------~~~-~~~~~~~~~~---------~~~~~~~~~dva~~~~~l~~~~~~--~~~G~~~~ 246 (254)
T 2wsb_A 185 NALAPGYVATEMTLKMR------ERP-ELFETWLDMT---------PMGRCGEPSEIAAAALFLASPAAS--YVTGAILA 246 (254)
T ss_dssp EEEEECCBCSHHHHHHH------TCH-HHHHHHHHTS---------TTSSCBCHHHHHHHHHHHHSGGGT--TCCSCEEE
T ss_pred EEEEecccCchhhhccc------cCh-HHHHHHHhcC---------CCCCCCCHHHHHHHHHHHhCcccc--cccCCEEE
Confidence 99999999876421100 001 1122222111 113478999999999988865331 13578999
Q ss_pred eccC
Q psy6053 399 LTSS 402 (614)
Q Consensus 399 i~~~ 402 (614)
+.++
T Consensus 247 v~gG 250 (254)
T 2wsb_A 247 VDGG 250 (254)
T ss_dssp ESTT
T ss_pred ECCC
Confidence 8876
No 113
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=99.78 E-value=1.8e-18 Score=173.15 Aligned_cols=217 Identities=17% Similarity=0.153 Sum_probs=131.2
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
+++|+||||||||+||++++++|++.|.+ |+++.|+.. +++++.+ .+. . ...++.++.+|+
T Consensus 7 ~~~k~vlITGas~giG~~~a~~l~~~G~~---V~~~~r~~~------~~~~~~~-----~~~----~-~~~~~~~~~~D~ 67 (253)
T 3qiv_A 7 FENKVGIVTGSGGGIGQAYAEALAREGAA---VVVADINAE------AAEAVAK-----QIV----A-DGGTAISVAVDV 67 (253)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCHH------HHHHHHH-----HHH----H-TTCEEEEEECCT
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCE---EEEEcCCHH------HHHHHHH-----HHH----h-cCCcEEEEEccC
Confidence 56899999999999999999999999876 888888632 2222111 111 1 335789999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcccccC----------hhHHHHHHHHHhHHHHHHHHHHH----HHcCCC
Q psy6053 180 EADELAIKESDRQLLAS-------EVDIMIHGAATIR----------FDEALKKAVLLNTRGTKMMLSLA----KEMKHL 238 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~----------~~~~~~~~~~~Nv~gt~~ll~la----~~~~~~ 238 (614)
++++ +++.+++ ++|++||+||... -.+.++..+++|+.|+.++.+.+ ++ .+.
T Consensus 68 ~~~~------~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~-~~~ 140 (253)
T 3qiv_A 68 SDPE------SAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTK-RGG 140 (253)
T ss_dssp TSHH------HHHHHHHHHHHHHSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HTC
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHh-cCC
Confidence 9976 6666665 7899999999731 13556788999999966655544 44 256
Q ss_pred ceEEEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----C
Q psy6053 239 ELFVHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----N 314 (614)
Q Consensus 239 k~~V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~ 314 (614)
.++|++||..+... ...|+.||+..|.+++..+. .
T Consensus 141 g~iv~isS~~~~~~-----------------------------------------~~~Y~asK~a~~~~~~~la~e~~~~ 179 (253)
T 3qiv_A 141 GAIVNQSSTAAWLY-----------------------------------------SNYYGLAKVGINGLTQQLSRELGGR 179 (253)
T ss_dssp EEEEEECC----------------------------------------------------CCHHHHHHHHHHHHHHTTTT
T ss_pred CEEEEECCccccCC-----------------------------------------CchhHHHHHHHHHHHHHHHHHHhhc
Confidence 78999999876421 15799999999988877665 4
Q ss_pred CCCEEEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCc
Q psy6053 315 GMPCLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQ 394 (614)
Q Consensus 315 glp~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~ 394 (614)
|+++..++||.|.++..... .+..+...+.++ .....+..++|+|++++.++..... ...+
T Consensus 180 gi~v~~v~PG~v~t~~~~~~--------~~~~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~s~~~~--~~tG 240 (253)
T 3qiv_A 180 NIRINAIAPGPIDTEANRTT--------TPKEMVDDIVKG---------LPLSRMGTPDDLVGMCLFLLSDEAS--WITG 240 (253)
T ss_dssp TEEEEEEEC------------------------------------------------CCHHHHHHHHHHSGGGT--TCCS
T ss_pred CeEEEEEEecCCcccchhhc--------CcHHHHHHHhcc---------CCCCCCCCHHHHHHHHHHHcCcccc--CCCC
Confidence 89999999999987643211 111111111111 1122345689999999988865432 1368
Q ss_pred cEEEeccC
Q psy6053 395 SIVHLTSS 402 (614)
Q Consensus 395 ~vyni~~~ 402 (614)
++|++.++
T Consensus 241 ~~~~vdgG 248 (253)
T 3qiv_A 241 QIFNVDGG 248 (253)
T ss_dssp CEEEC---
T ss_pred CEEEECCC
Confidence 89999887
No 114
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=99.78 E-value=2e-18 Score=171.99 Aligned_cols=220 Identities=17% Similarity=0.183 Sum_probs=143.8
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEE-EccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYIL-MRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGD 178 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~L-vR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gD 178 (614)
+++|+|+||||||+||++++++|++.|++ |+++ .|+... .+.+.+.+ +. ...++.++.+|
T Consensus 3 l~~~~vlItGasggiG~~~a~~l~~~G~~---V~~~~~r~~~~---~~~~~~~~--------~~-----~~~~~~~~~~D 63 (247)
T 2hq1_A 3 LKGKTAIVTGSSRGLGKAIAWKLGNMGAN---IVLNGSPASTS---LDATAEEF--------KA-----AGINVVVAKGD 63 (247)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTCE---EEEEECTTCSH---HHHHHHHH--------HH-----TTCCEEEEESC
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCCE---EEEEcCcCHHH---HHHHHHHH--------Hh-----cCCcEEEEECC
Confidence 46799999999999999999999999875 7777 444321 12221111 10 23568999999
Q ss_pred CCCCCCCCCHHHHHHHhc-------cccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHHc---CCCceE
Q psy6053 179 AEADELAIKESDRQLLAS-------EVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKEM---KHLELF 241 (614)
Q Consensus 179 l~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~ 241 (614)
+++++ +++.+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+... .+..++
T Consensus 64 ~~~~~------~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~i 137 (247)
T 2hq1_A 64 VKNPE------DVENMVKTAMDAFGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKI 137 (247)
T ss_dssp TTSHH------HHHHHHHHHHHHHSCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEE
T ss_pred CCCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEE
Confidence 99865 6666665 78999999997542 2345678899999998888877642 256799
Q ss_pred EEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCC
Q psy6053 242 VHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMP 317 (614)
Q Consensus 242 V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp 317 (614)
|++||..+.... | ....|+.||+..|.+++.... .|++
T Consensus 138 v~~sS~~~~~~~----------~----------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~ 179 (247)
T 2hq1_A 138 INITSIAGIIGN----------A----------------------------GQANYAASKAGLIGFTKSIAKEFAAKGIY 179 (247)
T ss_dssp EEECC-----------------------------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred EEEcChhhccCC----------C----------------------------CCcHhHHHHHHHHHHHHHHHHHHHHcCcE
Confidence 999998542211 0 015799999999998887654 4899
Q ss_pred EEEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEE
Q psy6053 318 CLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIV 397 (614)
Q Consensus 318 ~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vy 397 (614)
+++++||.+.++.... . +.........+ .....+++++|+|++++.++..... ...+++|
T Consensus 180 v~~v~Pg~v~t~~~~~-------~--~~~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~~~~~~--~~~G~~~ 239 (247)
T 2hq1_A 180 CNAVAPGIIKTDMTDV-------L--PDKVKEMYLNN---------IPLKRFGTPEEVANVVGFLASDDSN--YITGQVI 239 (247)
T ss_dssp EEEEEECSBCCHHHHT-------S--CHHHHHHHHTT---------STTSSCBCHHHHHHHHHHHHSGGGT--TCCSCEE
T ss_pred EEEEEEEEEeccchhh-------c--chHHHHHHHhh---------CCCCCCCCHHHHHHHHHHHcCcccc--cccCcEE
Confidence 9999999886542211 0 11111112221 1123578999999999888765431 1257899
Q ss_pred EeccC
Q psy6053 398 HLTSS 402 (614)
Q Consensus 398 ni~~~ 402 (614)
|+.++
T Consensus 240 ~v~gG 244 (247)
T 2hq1_A 240 NIDGG 244 (247)
T ss_dssp EESTT
T ss_pred EeCCC
Confidence 99876
No 115
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=99.78 E-value=4.8e-18 Score=169.59 Aligned_cols=219 Identities=15% Similarity=0.172 Sum_probs=154.5
Q ss_pred CCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCC
Q psy6053 101 TGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAE 180 (614)
Q Consensus 101 ~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~ 180 (614)
.+|+++||||+|+||++++++|++.|.+ |+++.|... +++++..+ .++ . ...++.++.+|++
T Consensus 3 ~~k~~lVTGas~gIG~~ia~~l~~~G~~---V~~~~~~~~-----~~~~~~~~-----~~~----~-~~~~~~~~~~Dv~ 64 (246)
T 3osu_A 3 MTKSALVTGASRGIGRSIALQLAEEGYN---VAVNYAGSK-----EKAEAVVE-----EIK----A-KGVDSFAIQANVA 64 (246)
T ss_dssp CSCEEEETTCSSHHHHHHHHHHHHTTCE---EEEEESSCH-----HHHHHHHH-----HHH----H-TTSCEEEEECCTT
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCE---EEEEeCCCH-----HHHHHHHH-----HHH----h-cCCcEEEEEccCC
Confidence 5789999999999999999999999876 777777532 22222111 111 1 3357889999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcccccC-------hhHHHHHHHHHhHHHHHHHHHHH----HHcCCCceEE
Q psy6053 181 ADELAIKESDRQLLAS-------EVDIMIHGAATIR-------FDEALKKAVLLNTRGTKMMLSLA----KEMKHLELFV 242 (614)
Q Consensus 181 ~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~-------~~~~~~~~~~~Nv~gt~~ll~la----~~~~~~k~~V 242 (614)
+++ +++.+++ ++|++||+||... -.+.++..+++|+.|+.++++.+ ++ .+..++|
T Consensus 65 d~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~-~~~g~iv 137 (246)
T 3osu_A 65 DAD------EVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLR-QRSGAII 137 (246)
T ss_dssp CHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-HTCEEEE
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH-cCCCEEE
Confidence 866 6766665 7899999999753 23567788999999999999988 44 3567999
Q ss_pred EEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCCE
Q psy6053 243 HISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMPC 318 (614)
Q Consensus 243 ~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp~ 318 (614)
++||..+..... ....|+.||+..+.+.+..+. +|+++
T Consensus 138 ~isS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v 179 (246)
T 3osu_A 138 NLSSVVGAVGNP--------------------------------------GQANYVATKAGVIGLTKSAARELASRGITV 179 (246)
T ss_dssp EECCHHHHHCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred EEcchhhcCCCC--------------------------------------CChHHHHHHHHHHHHHHHHHHHhcccCeEE
Confidence 999986532210 015799999988888776554 68999
Q ss_pred EEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEE
Q psy6053 319 LMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVH 398 (614)
Q Consensus 319 ~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyn 398 (614)
..++||.|.++..... ..........+. ....+...+|+|++++.++..... ...+++++
T Consensus 180 n~v~PG~v~t~~~~~~---------~~~~~~~~~~~~---------p~~r~~~~~dva~~v~~l~s~~~~--~itG~~i~ 239 (246)
T 3osu_A 180 NAVAPGFIVSDMTDAL---------SDELKEQMLTQI---------PLARFGQDTDIANTVAFLASDKAK--YITGQTIH 239 (246)
T ss_dssp EEEEECSBGGGCCSCS---------CHHHHHHHHTTC---------TTCSCBCHHHHHHHHHHHTSGGGT--TCCSCEEE
T ss_pred EEEEECCCcCCccccc---------CHHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHhCcccc--CCCCCEEE
Confidence 9999999987654321 112222222221 123466789999999988865432 13588999
Q ss_pred eccC
Q psy6053 399 LTSS 402 (614)
Q Consensus 399 i~~~ 402 (614)
+.++
T Consensus 240 vdgG 243 (246)
T 3osu_A 240 VNGG 243 (246)
T ss_dssp ESTT
T ss_pred eCCC
Confidence 9876
No 116
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Probab=99.77 E-value=1.9e-18 Score=171.85 Aligned_cols=219 Identities=13% Similarity=0.139 Sum_probs=150.3
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEE-EccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCC
Q psy6053 102 GKTLFMTGASGFLGKVLLEKILRKSPNVKKIYIL-MRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAE 180 (614)
Q Consensus 102 ~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~L-vR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~ 180 (614)
||+|+||||||+||++++++|++.|++ |+++ .|+... .+.+.+. ++. ...++.++.+|++
T Consensus 1 ~k~vlVTGasggiG~~la~~l~~~G~~---v~~~~~r~~~~---~~~~~~~--------~~~-----~~~~~~~~~~D~~ 61 (244)
T 1edo_A 1 SPVVVVTGASRGIGKAIALSLGKAGCK---VLVNYARSAKA---AEEVSKQ--------IEA-----YGGQAITFGGDVS 61 (244)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTCE---EEEEESSCHHH---HHHHHHH--------HHH-----HTCEEEEEECCTT
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCE---EEEEcCCCHHH---HHHHHHH--------HHh-----cCCcEEEEeCCCC
Confidence 578999999999999999999999876 6764 565311 1122111 111 2247889999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHHc---CCCceEEE
Q psy6053 181 ADELAIKESDRQLLAS-------EVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKEM---KHLELFVH 243 (614)
Q Consensus 181 ~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~V~ 243 (614)
+++ +++.+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+... .+..++|+
T Consensus 62 ~~~------~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~ 135 (244)
T 1edo_A 62 KEA------DVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIIN 135 (244)
T ss_dssp SHH------HHHHHHHHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEE
Confidence 865 6777665 68999999997542 3566788999999999999888652 25679999
Q ss_pred EeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCCEE
Q psy6053 244 ISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMPCL 319 (614)
Q Consensus 244 vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp~~ 319 (614)
+||..+.... | ....|+.||+..|.+.+.... .|++++
T Consensus 136 ~sS~~~~~~~----------~----------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~ 177 (244)
T 1edo_A 136 IASVVGLIGN----------I----------------------------GQANYAAAKAGVIGFSKTAAREGASRNINVN 177 (244)
T ss_dssp ECCTHHHHCC----------T----------------------------TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEE
T ss_pred ECChhhcCCC----------C----------------------------CCccchhhHHHHHHHHHHHHHHhhhcCCEEE
Confidence 9998653211 0 015799999988888776554 589999
Q ss_pred EeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEe
Q psy6053 320 MLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHL 399 (614)
Q Consensus 320 IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni 399 (614)
++|||.|.++.... ..+ .......... ....+++++|+|++++.++..+.. ....+++|++
T Consensus 178 ~v~Pg~v~t~~~~~--------~~~-~~~~~~~~~~---------~~~~~~~~~dva~~~~~l~~~~~~-~~~~G~~~~v 238 (244)
T 1edo_A 178 VVCPGFIASDMTAK--------LGE-DMEKKILGTI---------PLGRTGQPENVAGLVEFLALSPAA-SYITGQAFTI 238 (244)
T ss_dssp EEEECSBCSHHHHT--------TCH-HHHHHHHTSC---------TTCSCBCHHHHHHHHHHHHHCSGG-GGCCSCEEEE
T ss_pred EEeeCccccchhhh--------cCh-HHHHHHhhcC---------CCCCCCCHHHHHHHHHHHhCCCcc-CCcCCCEEEe
Confidence 99999997763211 011 1111111111 112478999999999988854321 0125789998
Q ss_pred ccC
Q psy6053 400 TSS 402 (614)
Q Consensus 400 ~~~ 402 (614)
.++
T Consensus 239 ~gG 241 (244)
T 1edo_A 239 DGG 241 (244)
T ss_dssp STT
T ss_pred CCC
Confidence 876
No 117
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=99.77 E-value=8.4e-18 Score=169.32 Aligned_cols=211 Identities=13% Similarity=0.122 Sum_probs=150.6
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
+++|+|+||||||+||++++++|++.|++ |+++.|.. +++++..+ + ...++.++.+|+
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~---V~~~~r~~------~~~~~~~~---------~----~~~~~~~~~~D~ 62 (260)
T 1nff_A 5 LTGKVALVSGGARGMGASHVRAMVAEGAK---VVFGDILD------EEGKAMAA---------E----LADAARYVHLDV 62 (260)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCH------HHHHHHHH---------H----TGGGEEEEECCT
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEeCCH------HHHHHHHH---------H----hhcCceEEEecC
Confidence 56899999999999999999999999876 88888863 22222111 0 123578899999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHH----HHcCCCceE
Q psy6053 180 EADELAIKESDRQLLAS-------EVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLA----KEMKHLELF 241 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la----~~~~~~k~~ 241 (614)
++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++.+ ++ .+..++
T Consensus 63 ~~~~------~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~-~~~g~i 135 (260)
T 1nff_A 63 TQPA------QWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKE-AGRGSI 135 (260)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-HTCEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh-cCCCEE
Confidence 9865 6777766 79999999996532 3567788999999996665554 44 256799
Q ss_pred EEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCC
Q psy6053 242 VHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMP 317 (614)
Q Consensus 242 V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp 317 (614)
|++||..+..... ....|+.||+..|.+.+..+. .|++
T Consensus 136 v~isS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~ 177 (260)
T 1nff_A 136 INISSIEGLAGTV--------------------------------------ACHGYTATKFAVRGLTKSTALELGPSGIR 177 (260)
T ss_dssp EEECCGGGTSCCT--------------------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred EEEeehhhcCCCC--------------------------------------CchhHHHHHHHHHHHHHHHHHHhCccCcE
Confidence 9999987643210 014799999999998877654 5899
Q ss_pred EEEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEE
Q psy6053 318 CLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIV 397 (614)
Q Consensus 318 ~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vy 397 (614)
++++|||.|.++... +... ... ......+.+++|+|++++.++..... ...+++|
T Consensus 178 v~~v~Pg~v~t~~~~----~~~~--------------~~~-----~~~~~~~~~~~dvA~~v~~l~s~~~~--~~~G~~~ 232 (260)
T 1nff_A 178 VNSIHPGLVKTPMTD----WVPE--------------DIF-----QTALGRAAEPVEVSNLVVYLASDESS--YSTGAEF 232 (260)
T ss_dssp EEEEEECCBCSGGGT----TSCT--------------TCS-----CCSSSSCBCHHHHHHHHHHHHSGGGT--TCCSCEE
T ss_pred EEEEEeCCCCCCccc----cchh--------------hHH-----hCccCCCCCHHHHHHHHHHHhCcccc--CCcCCEE
Confidence 999999999887432 1000 000 00112467899999999988865331 1257899
Q ss_pred EeccC
Q psy6053 398 HLTSS 402 (614)
Q Consensus 398 ni~~~ 402 (614)
++.++
T Consensus 233 ~v~gG 237 (260)
T 1nff_A 233 VVDGG 237 (260)
T ss_dssp EESTT
T ss_pred EECCC
Confidence 99887
No 118
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=99.77 E-value=7.6e-18 Score=169.18 Aligned_cols=220 Identities=14% Similarity=0.109 Sum_probs=150.4
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
+++|+||||||||+||++++++|++.|++ |+++.|.... +.+.+. . .+ .++.+|+
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~---V~~~~r~~~~----~~~~~~----------------~-~~-~~~~~D~ 58 (256)
T 2d1y_A 4 FAGKGVLVTGGARGIGRAIAQAFAREGAL---VALCDLRPEG----KEVAEA----------------I-GG-AFFQVDL 58 (256)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESSTTH----HHHHHH----------------H-TC-EEEECCT
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEeCChhH----HHHHHH----------------h-hC-CEEEeeC
Confidence 46899999999999999999999999875 8888987532 111110 1 13 6789999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHHc---CCCceEE
Q psy6053 180 EADELAIKESDRQLLAS-------EVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKEM---KHLELFV 242 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~V 242 (614)
++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++++... .+..++|
T Consensus 59 ~~~~------~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv 132 (256)
T 2d1y_A 59 EDER------ERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIV 132 (256)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEE
Confidence 9865 6666554 68999999996532 3467788999999999999887542 3567999
Q ss_pred EEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCCE
Q psy6053 243 HISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMPC 318 (614)
Q Consensus 243 ~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp~ 318 (614)
++||..+.... | ....|+.||+..|.+.+..+. .|+++
T Consensus 133 ~isS~~~~~~~----------~----------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v 174 (256)
T 2d1y_A 133 NVASVQGLFAE----------Q----------------------------ENAAYNASKGGLVNLTRSLALDLAPLRIRV 174 (256)
T ss_dssp EECCGGGTSBC----------T----------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred EEccccccCCC----------C----------------------------CChhHHHHHHHHHHHHHHHHHHHhhcCeEE
Confidence 99998653221 0 015799999999998877654 58999
Q ss_pred EEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEE
Q psy6053 319 LMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVH 398 (614)
Q Consensus 319 ~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyn 398 (614)
.+++||.|.++... .+.... ...+..............+++++|+|++++.++..... ...+++++
T Consensus 175 ~~v~Pg~v~t~~~~---~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~s~~~~--~~~G~~~~ 240 (256)
T 2d1y_A 175 NAVAPGAIATEAVL---EAIALS---------PDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEKAS--FITGAILP 240 (256)
T ss_dssp EEEEECSBCCHHHH---HHHC-----------------CHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGT--TCCSCEEE
T ss_pred EEEeeCCccCchhh---hccccc---------cCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhc--CCCCCEEE
Confidence 99999988654210 000000 00000000001112234578999999999988865431 13678999
Q ss_pred eccC
Q psy6053 399 LTSS 402 (614)
Q Consensus 399 i~~~ 402 (614)
+.++
T Consensus 241 v~gG 244 (256)
T 2d1y_A 241 VDGG 244 (256)
T ss_dssp ESTT
T ss_pred ECCC
Confidence 9888
No 119
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=99.77 E-value=4.9e-18 Score=170.65 Aligned_cols=223 Identities=15% Similarity=0.105 Sum_probs=152.1
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
+++|+|+||||||+||++++++|++.|++ |+++.|... ++++++.+ .++. ...++.++.+|+
T Consensus 5 l~~k~vlITGasggiG~~~a~~l~~~G~~---V~~~~r~~~-----~~~~~~~~-----~l~~-----~~~~~~~~~~D~ 66 (261)
T 1gee_A 5 LEGKVVVITGSSTGLGKSMAIRFATEKAK---VVVNYRSKE-----DEANSVLE-----EIKK-----VGGEAIAVKGDV 66 (261)
T ss_dssp GTTCEEEETTCSSHHHHHHHHHHHHTTCE---EEEEESSCH-----HHHHHHHH-----HHHH-----TTCEEEEEECCT
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCE---EEEEcCCCh-----HHHHHHHH-----HHHh-----cCCceEEEECCC
Confidence 56899999999999999999999999875 888888321 12222111 1111 235788999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHHc---CC-CceE
Q psy6053 180 EADELAIKESDRQLLAS-------EVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKEM---KH-LELF 241 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~-~k~~ 241 (614)
++++ +++.+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+... .+ ..++
T Consensus 67 ~~~~------~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~i 140 (261)
T 1gee_A 67 TVES------DVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTV 140 (261)
T ss_dssp TSHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEE
Confidence 9865 6666665 78999999996532 3556788999999999988876652 23 5799
Q ss_pred EEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCC
Q psy6053 242 VHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMP 317 (614)
Q Consensus 242 V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp 317 (614)
|++||..+.... | ....|+.||+..|.+.+.... .|++
T Consensus 141 v~isS~~~~~~~----------~----------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~ 182 (261)
T 1gee_A 141 INMSSVHEKIPW----------P----------------------------LFVHYAASKGGMKLMTETLALEYAPKGIR 182 (261)
T ss_dssp EEECCGGGTSCC----------T----------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCE
T ss_pred EEeCCHHhcCCC----------C----------------------------CccHHHHHHHHHHHHHHHHHHHhcccCeE
Confidence 999998653211 0 015799999888887766544 5899
Q ss_pred EEEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEE
Q psy6053 318 CLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIV 397 (614)
Q Consensus 318 ~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vy 397 (614)
++++|||.|.++..... . ..+ .....+... .....+++++|+|++++.++..... ...++++
T Consensus 183 v~~v~Pg~v~t~~~~~~---~---~~~-~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~~~~~~--~~~G~~~ 244 (261)
T 1gee_A 183 VNNIGPGAINTPINAEK---F---ADP-EQRADVESM---------IPMGYIGEPEEIAAVAAWLASSEAS--YVTGITL 244 (261)
T ss_dssp EEEEEECSBCSGGGHHH---H---HSH-HHHHHHHTT---------CTTSSCBCHHHHHHHHHHHHSGGGT--TCCSCEE
T ss_pred EEEEeeCCcCCchhhhc---c---cCh-hHHHHHHhc---------CCCCCCcCHHHHHHHHHHHhCcccc--CCCCcEE
Confidence 99999999987642100 0 001 111111111 0113478999999999988864321 1357899
Q ss_pred EeccC
Q psy6053 398 HLTSS 402 (614)
Q Consensus 398 ni~~~ 402 (614)
++.++
T Consensus 245 ~v~gg 249 (261)
T 1gee_A 245 FADGG 249 (261)
T ss_dssp EESTT
T ss_pred EEcCC
Confidence 99887
No 120
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=99.77 E-value=4.5e-18 Score=170.68 Aligned_cols=227 Identities=15% Similarity=0.114 Sum_probs=152.5
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
+++|+|+||||||+||++++++|++.|++ |+++.|+.. .+..+++.. ...++.++.+|+
T Consensus 2 l~~k~vlVTGas~giG~~ia~~l~~~G~~---V~~~~r~~~----~~~~~~l~~--------------~~~~~~~~~~D~ 60 (255)
T 2q2v_A 2 LKGKTALVTGSTSGIGLGIAQVLARAGAN---IVLNGFGDP----APALAEIAR--------------HGVKAVHHPADL 60 (255)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHTTCE---EEEECSSCC----HHHHHHHHT--------------TSCCEEEECCCT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEeCCch----HHHHHHHHh--------------cCCceEEEeCCC
Confidence 46899999999999999999999999875 888888754 111222110 224688999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHH----HHcCCCceE
Q psy6053 180 EADELAIKESDRQLLAS-------EVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLA----KEMKHLELF 241 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la----~~~~~~k~~ 241 (614)
++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++.+.+ ++ .+..++
T Consensus 61 ~~~~------~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~-~~~g~i 133 (255)
T 2q2v_A 61 SDVA------QIEALFALAEREFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRA-RNWGRI 133 (255)
T ss_dssp TSHH------HHHHHHHHHHHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-TTCEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH-cCCcEE
Confidence 9865 7777766 79999999996432 3567788999999877766655 44 356899
Q ss_pred EEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCC
Q psy6053 242 VHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMP 317 (614)
Q Consensus 242 V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp 317 (614)
|++||..+..... ....|+.||+..+.+.+..+. .|++
T Consensus 134 v~isS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~ 175 (255)
T 2q2v_A 134 INIASVHGLVGST--------------------------------------GKAAYVAAKHGVVGLTKVVGLETATSNVT 175 (255)
T ss_dssp EEECCGGGTSCCT--------------------------------------TBHHHHHHHHHHHHHHHHHHHHTTTSSEE
T ss_pred EEEcCchhccCCC--------------------------------------CchhHHHHHHHHHHHHHHHHHHhcccCcE
Confidence 9999987643210 015799999999998877654 5899
Q ss_pred EEEeecceeecccCCCCccccCCCCc-hHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccE
Q psy6053 318 CLMLRPSIIIPVWREPLPGWTDNING-PTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSI 396 (614)
Q Consensus 318 ~~IvRp~~I~g~~~~p~~gw~d~~~g-~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~v 396 (614)
++++|||.|.++.......-.+...+ ......... ........+++++|+|++++.++..... ...+++
T Consensus 176 v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~p~~~~~~~~dvA~~~~~l~s~~~~--~~tG~~ 245 (255)
T 2q2v_A 176 CNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLL--------AEKQPSLAFVTPEHLGELVLFLCSEAGS--QVRGAA 245 (255)
T ss_dssp EEEEEESSBCCHHHHHHHHHHHHHTCCHHHHHHHHH--------TTTCTTCCCBCHHHHHHHHHHHTSGGGT--TCCSCE
T ss_pred EEEEeeCCCcCcchhhhcccccccccchHHHHHHHH--------hccCCCCCCcCHHHHHHHHHHHhCCccC--CCCCCE
Confidence 99999999977532100000000000 000001110 1111223588999999999988765432 125789
Q ss_pred EEeccC
Q psy6053 397 VHLTSS 402 (614)
Q Consensus 397 yni~~~ 402 (614)
+++.++
T Consensus 246 ~~vdgG 251 (255)
T 2q2v_A 246 WNVDGG 251 (255)
T ss_dssp EEESTT
T ss_pred EEECCC
Confidence 999877
No 121
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=99.77 E-value=6.8e-18 Score=170.02 Aligned_cols=221 Identities=15% Similarity=0.121 Sum_probs=154.4
Q ss_pred cCCcEEEEeccc--ccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeC
Q psy6053 100 FTGKTLFMTGAS--GFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISG 177 (614)
Q Consensus 100 ~~~~~VLITGaT--GFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~g 177 (614)
+++|+|+||||| |+||++++++|++.|++ |+++.|+.. ..+.++++.+ ...++.++.+
T Consensus 6 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~---V~~~~r~~~---~~~~~~~l~~--------------~~~~~~~~~~ 65 (261)
T 2wyu_A 6 LSGKKALVMGVTNQRSLGFAIAAKLKEAGAE---VALSYQAER---LRPEAEKLAE--------------ALGGALLFRA 65 (261)
T ss_dssp CTTCEEEEESCCSSSSHHHHHHHHHHHHTCE---EEEEESCGG---GHHHHHHHHH--------------HTTCCEEEEC
T ss_pred CCCCEEEEECCCCCCcHHHHHHHHHHHCCCE---EEEEcCCHH---HHHHHHHHHH--------------hcCCcEEEEC
Confidence 568999999999 99999999999999876 888888753 2233333211 1123688999
Q ss_pred CCCCCCCCCCHHHHHHHhc-------cccEEEEcccccCh-----------hHHHHHHHHHhHHHHHHHHHHHHHc-CCC
Q psy6053 178 DAEADELAIKESDRQLLAS-------EVDIMIHGAATIRF-----------DEALKKAVLLNTRGTKMMLSLAKEM-KHL 238 (614)
Q Consensus 178 Dl~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~-----------~~~~~~~~~~Nv~gt~~ll~la~~~-~~~ 238 (614)
|+++++ +++.+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+... .+-
T Consensus 66 D~~~~~------~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~ 139 (261)
T 2wyu_A 66 DVTQDE------ELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREG 139 (261)
T ss_dssp CTTCHH------HHHHHHHHHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEE
T ss_pred CCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccC
Confidence 999865 6666655 68999999997542 3557788999999999999999763 112
Q ss_pred ceEEEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----C
Q psy6053 239 ELFVHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----N 314 (614)
Q Consensus 239 k~~V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~ 314 (614)
.++|++||..+.... | ....|+.||+..|.+.+..+. +
T Consensus 140 g~iv~isS~~~~~~~----------~----------------------------~~~~Y~asK~a~~~~~~~la~e~~~~ 181 (261)
T 2wyu_A 140 GGIVTLTYYASEKVV----------P----------------------------KYNVMAIAKAALEASVRYLAYELGPK 181 (261)
T ss_dssp EEEEEEECGGGTSBC----------T----------------------------TCHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred CEEEEEecccccCCC----------C----------------------------CchHHHHHHHHHHHHHHHHHHHHhhh
Confidence 489999997653211 0 014799999999998877654 4
Q ss_pred CCCEEEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCc
Q psy6053 315 GMPCLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQ 394 (614)
Q Consensus 315 glp~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~ 394 (614)
|+++++++||.|.++..... .........+.... ....+.+++|+|++++.++..... ...+
T Consensus 182 gi~v~~v~Pg~v~t~~~~~~-------~~~~~~~~~~~~~~---------p~~~~~~~~dva~~v~~l~s~~~~--~~tG 243 (261)
T 2wyu_A 182 GVRVNAISAGPVRTVAARSI-------PGFTKMYDRVAQTA---------PLRRNITQEEVGNLGLFLLSPLAS--GITG 243 (261)
T ss_dssp TCEEEEEEECCCCCTGGGGC-------TTHHHHHHHHHHHS---------TTSSCCCHHHHHHHHHHHHSGGGT--TCCS
T ss_pred CcEEEEEeeCCCcCchhhhc-------cccHHHHHHHHhcC---------CCCCCCCHHHHHHHHHHHcChhhc--CCCC
Confidence 89999999999987643211 11111222221111 012356899999999988854332 1357
Q ss_pred cEEEeccC
Q psy6053 395 SIVHLTSS 402 (614)
Q Consensus 395 ~vyni~~~ 402 (614)
+++++.++
T Consensus 244 ~~~~vdgG 251 (261)
T 2wyu_A 244 EVVYVDAG 251 (261)
T ss_dssp CEEEESTT
T ss_pred CEEEECCC
Confidence 89999887
No 122
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=99.77 E-value=4.9e-18 Score=170.89 Aligned_cols=223 Identities=17% Similarity=0.157 Sum_probs=154.1
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
+++|+|+||||||+||++++++|++.|.+ |+++.|... ++++..+ .++. ...++.++.+|+
T Consensus 7 l~~k~vlVTGas~giG~~ia~~l~~~G~~---V~~~~r~~~------~~~~~~~-----~~~~-----~~~~~~~~~~D~ 67 (260)
T 2ae2_A 7 LEGCTALVTGGSRGIGYGIVEELASLGAS---VYTCSRNQK------ELNDCLT-----QWRS-----KGFKVEASVCDL 67 (260)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCE---EEEEESCHH------HHHHHHH-----HHHH-----TTCEEEEEECCT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEeCCHH------HHHHHHH-----HHHh-----cCCcEEEEEcCC
Confidence 56899999999999999999999999876 888888642 2222111 1111 224788999999
Q ss_pred CCCCCCCCHHHHHHHh--------ccccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHHc---CCCceE
Q psy6053 180 EADELAIKESDRQLLA--------SEVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKEM---KHLELF 241 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~--------~~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~ 241 (614)
++++ +++.++ .++|++||+||.... .+.++..+++|+.|+.++++++... .+..++
T Consensus 68 ~~~~------~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~i 141 (260)
T 2ae2_A 68 SSRS------ERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNV 141 (260)
T ss_dssp TCHH------HHHHHHHHHHHHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEE
Confidence 9865 666665 469999999996532 3567788999999999999988431 356899
Q ss_pred EEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCC
Q psy6053 242 VHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMP 317 (614)
Q Consensus 242 V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp 317 (614)
|++||..+.... | ....|+.||+..|.+.+..+. .|++
T Consensus 142 v~isS~~~~~~~----------~----------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~ 183 (260)
T 2ae2_A 142 VFISSVSGALAV----------P----------------------------YEAVYGATKGAMDQLTRCLAFEWAKDNIR 183 (260)
T ss_dssp EEECCGGGTSCC----------T----------------------------TCHHHHHHHHHHHHHHHHHHHHTGGGTEE
T ss_pred EEEcchhhccCC----------C----------------------------CcchHHHHHHHHHHHHHHHHHHHhhcCcE
Confidence 999998653221 0 015799999999999887654 4899
Q ss_pred EEEeecceeecccCCCCccccCCCCchH--HHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCcc
Q psy6053 318 CLMLRPSIIIPVWREPLPGWTDNINGPT--GLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQS 395 (614)
Q Consensus 318 ~~IvRp~~I~g~~~~p~~gw~d~~~g~~--~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~ 395 (614)
+++++||.|.++... .+. ..+. ..+...... .....+.+++|+|++++.++..... ...++
T Consensus 184 v~~v~Pg~v~t~~~~---~~~---~~~~~~~~~~~~~~~---------~~~~~~~~~~dvA~~v~~l~s~~~~--~~tG~ 246 (260)
T 2ae2_A 184 VNGVGPGVIATSLVE---MTI---QDPEQKENLNKLIDR---------CALRRMGEPKELAAMVAFLCFPAAS--YVTGQ 246 (260)
T ss_dssp EEEEEECSBCSHHHH---HHT---TSHHHHHHHHHHHHT---------STTCSCBCHHHHHHHHHHHHSGGGT--TCCSC
T ss_pred EEEEecCCCCCcchh---hhc---cChhhHHHHHHHHhc---------CCCCCCCCHHHHHHHHHHHcCcccc--CCCCC
Confidence 999999988665311 000 0110 111111111 1123478999999999988754331 13678
Q ss_pred EEEeccC
Q psy6053 396 IVHLTSS 402 (614)
Q Consensus 396 vyni~~~ 402 (614)
++++.++
T Consensus 247 ~~~vdgG 253 (260)
T 2ae2_A 247 IIYVDGG 253 (260)
T ss_dssp EEEESTT
T ss_pred EEEECCC
Confidence 9999877
No 123
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=99.77 E-value=2.5e-17 Score=166.86 Aligned_cols=220 Identities=16% Similarity=0.126 Sum_probs=157.2
Q ss_pred ccccCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEe
Q psy6053 97 GETFTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPIS 176 (614)
Q Consensus 97 ~~~~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~ 176 (614)
...+++|+++||||+|+||++++++|++.|.+ |+++.|+.... .+-.++ ...++.++.
T Consensus 6 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~---V~~~~r~~~~~--~~~~~~-----------------~~~~~~~~~ 63 (271)
T 3tzq_B 6 TAELENKVAIITGACGGIGLETSRVLARAGAR---VVLADLPETDL--AGAAAS-----------------VGRGAVHHV 63 (271)
T ss_dssp -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEECTTSCH--HHHHHH-----------------HCTTCEEEE
T ss_pred CcCCCCCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEcCCHHHH--HHHHHH-----------------hCCCeEEEE
Confidence 34467899999999999999999999999875 88888876432 211111 124678899
Q ss_pred CCCCCCCCCCCHHHHHHHhc-------cccEEEEcccccCh---------hHHHHHHHHHhHHHHHHHHHHH----HHcC
Q psy6053 177 GDAEADELAIKESDRQLLAS-------EVDIMIHGAATIRF---------DEALKKAVLLNTRGTKMMLSLA----KEMK 236 (614)
Q Consensus 177 gDl~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~---------~~~~~~~~~~Nv~gt~~ll~la----~~~~ 236 (614)
+|+++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++.+ ++ .
T Consensus 64 ~Dv~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~-~ 136 (271)
T 3tzq_B 64 VDLTNEV------SVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLIS-A 136 (271)
T ss_dssp CCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-T
T ss_pred CCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-c
Confidence 9999866 6777665 78999999997522 3556788999999999999988 44 3
Q ss_pred CCceEEEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh---
Q psy6053 237 HLELFVHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN--- 313 (614)
Q Consensus 237 ~~k~~V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~--- 313 (614)
+..++|++||..+..... ....|+.||+..|.+.+..+.
T Consensus 137 ~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~l~~~la~e~~ 178 (271)
T 3tzq_B 137 GGGAIVNISSATAHAAYD--------------------------------------MSTAYACTKAAIETLTRYVATQYG 178 (271)
T ss_dssp TCEEEEEECCGGGTSBCS--------------------------------------SCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred CCCEEEEECCHHHcCCCC--------------------------------------CChHHHHHHHHHHHHHHHHHHHHh
Confidence 567999999986643211 015799999999988877655
Q ss_pred -CCCCEEEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCC
Q psy6053 314 -NGMPCLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEH 392 (614)
Q Consensus 314 -~glp~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~ 392 (614)
+|+++..++||.|.++.... .. +........... ....+...+|+|++++.++..... -.
T Consensus 179 ~~gi~vn~v~PG~v~t~~~~~------~~--~~~~~~~~~~~~---------~~~r~~~p~dvA~~v~~L~s~~~~--~i 239 (271)
T 3tzq_B 179 RHGVRCNAIAPGLVRTPRLEV------GL--PQPIVDIFATHH---------LAGRIGEPHEIAELVCFLASDRAA--FI 239 (271)
T ss_dssp GGTEEEEEEEECCBCCTTTC-----------CHHHHHHHHTTS---------TTSSCBCHHHHHHHHHHHHSGGGT--TC
T ss_pred hcCEEEEEEEeCCCcCccccc------cC--CHHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHhCcccC--Cc
Confidence 58999999999998764321 10 112222222211 112356789999999988865432 13
Q ss_pred CccEEEeccC
Q psy6053 393 RQSIVHLTSS 402 (614)
Q Consensus 393 ~~~vyni~~~ 402 (614)
.++++++.++
T Consensus 240 tG~~i~vdGG 249 (271)
T 3tzq_B 240 TGQVIAADSG 249 (271)
T ss_dssp CSCEEEESTT
T ss_pred CCCEEEECCC
Confidence 6889999877
No 124
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=99.77 E-value=1.4e-18 Score=175.09 Aligned_cols=231 Identities=16% Similarity=0.115 Sum_probs=155.1
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
+++|+|+||||||+||++++++|++.|++ |+++.|+.. ++++..+ .+... ...++.++.+|+
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~---V~~~~r~~~------~~~~~~~-----~l~~~----~~~~~~~~~~D~ 66 (263)
T 3ai3_A 5 ISGKVAVITGSSSGIGLAIAEGFAKEGAH---IVLVARQVD------RLHEAAR-----SLKEK----FGVRVLEVAVDV 66 (263)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCE---EEEEESCHH------HHHHHHH-----HHHHH----HCCCEEEEECCT
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCE---EEEEcCCHH------HHHHHHH-----HHHHh----cCCceEEEEcCC
Confidence 56899999999999999999999999875 888888632 2222111 11110 124688999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcccccC-------hhHHHHHHHHHhHHHHHHHHHHHHHc---CCCceEE
Q psy6053 180 EADELAIKESDRQLLAS-------EVDIMIHGAATIR-------FDEALKKAVLLNTRGTKMMLSLAKEM---KHLELFV 242 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~-------~~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~V 242 (614)
++++ +++.+++ ++|+|||+||... ..+.++..+++|+.|+.++++.+... .+..++|
T Consensus 67 ~~~~------~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv 140 (263)
T 3ai3_A 67 ATPE------GVDAVVESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAII 140 (263)
T ss_dssp TSHH------HHHHHHHHHHHHHSSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEE
Confidence 9865 6766665 7899999999653 23567788999999999998887531 2567999
Q ss_pred EEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCCE
Q psy6053 243 HISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMPC 318 (614)
Q Consensus 243 ~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp~ 318 (614)
++||..+..... ....|+.||+..|.+.+..+. .|+++
T Consensus 141 ~isS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v 182 (263)
T 3ai3_A 141 HNASICAVQPLW--------------------------------------YEPIYNVTKAALMMFSKTLATEVIKDNIRV 182 (263)
T ss_dssp EECCGGGTSCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred EECchhhcCCCC--------------------------------------CcchHHHHHHHHHHHHHHHHHHhhhcCcEE
Confidence 999997643210 014799999999998877654 58999
Q ss_pred EEeecceeecccCCCC-ccccCCCCc-hHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccE
Q psy6053 319 LMLRPSIIIPVWREPL-PGWTDNING-PTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSI 396 (614)
Q Consensus 319 ~IvRp~~I~g~~~~p~-~gw~d~~~g-~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~v 396 (614)
+++|||.|.++..... +.+...... ..........+. .....+.+++|+|++++.++..... ...+++
T Consensus 183 ~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~p~~~~~~~~dvA~~~~~l~s~~~~--~~~G~~ 252 (263)
T 3ai3_A 183 NCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEH--------APIKRFASPEELANFFVFLCSERAT--YSVGSA 252 (263)
T ss_dssp EEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHHHH--------CTTCSCBCHHHHHHHHHHHTSTTCT--TCCSCE
T ss_pred EEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHHhcC--------CCCCCCcCHHHHHHHHHHHcCcccc--CCCCcE
Confidence 9999999987642110 000000000 011111111110 1123578999999999988754321 125789
Q ss_pred EEeccC
Q psy6053 397 VHLTSS 402 (614)
Q Consensus 397 yni~~~ 402 (614)
|++.++
T Consensus 253 ~~vdgG 258 (263)
T 3ai3_A 253 YFVDGG 258 (263)
T ss_dssp EEESTT
T ss_pred EEECCC
Confidence 999887
No 125
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=99.77 E-value=9e-18 Score=170.98 Aligned_cols=237 Identities=16% Similarity=0.161 Sum_probs=159.4
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCc------CHHHHHHHHHhChhhHHhhhhccccccCeEE
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGK------NARQRIEELFASPLFNLLKSVHGQKIIDKVL 173 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~------~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~ 173 (614)
+++|+++||||+|+||++++++|++.|.+ |+++.|+.... ...+++++..+ .+. . ...++.
T Consensus 8 l~~k~~lVTGas~gIG~a~a~~l~~~G~~---V~~~~r~~~~~~~~~~~~~~~~~~~~~~-----~~~----~-~~~~~~ 74 (281)
T 3s55_A 8 FEGKTALITGGARGMGRSHAVALAEAGAD---IAICDRCENSDVVGYPLATADDLAETVA-----LVE----K-TGRRCI 74 (281)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEECCSCCTTCSSCCCCHHHHHHHHH-----HHH----H-TTCCEE
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCe---EEEEeCCccccccccccccHHHHHHHHH-----HHH----h-cCCeEE
Confidence 67899999999999999999999999876 88889874321 01233332211 111 1 335789
Q ss_pred EEeCCCCCCCCCCCHHHHHHHhc-------cccEEEEcccccC-------hhHHHHHHHHHhHHHHHHHHHHHHHc---C
Q psy6053 174 PISGDAEADELAIKESDRQLLAS-------EVDIMIHGAATIR-------FDEALKKAVLLNTRGTKMMLSLAKEM---K 236 (614)
Q Consensus 174 ~v~gDl~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~-------~~~~~~~~~~~Nv~gt~~ll~la~~~---~ 236 (614)
++.+|+++++ +++.+++ ++|++||+||... -.+.++..+++|+.|+.++++++... .
T Consensus 75 ~~~~Dv~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~ 148 (281)
T 3s55_A 75 SAKVDVKDRA------ALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKR 148 (281)
T ss_dssp EEECCTTCHH------HHHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEeCCCCCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 9999999976 6666665 7899999999753 24567888999999999999986431 2
Q ss_pred CCceEEEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh---
Q psy6053 237 HLELFVHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN--- 313 (614)
Q Consensus 237 ~~k~~V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~--- 313 (614)
+..++|++||..+..... ....|+.||+..+.+.+..+.
T Consensus 149 ~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~asK~a~~~~~~~la~e~~ 190 (281)
T 3s55_A 149 NYGRIVTVSSMLGHSANF--------------------------------------AQASYVSSKWGVIGLTKCAAHDLV 190 (281)
T ss_dssp TCEEEEEECCGGGGSCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHTG
T ss_pred CCCEEEEECChhhcCCCC--------------------------------------CCchhHHHHHHHHHHHHHHHHHHh
Confidence 457899999987643211 015799999999988877655
Q ss_pred -CCCCEEEeecceeecccCCCCc---cccCCCCch-HHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhh
Q psy6053 314 -NGMPCLMLRPSIIIPVWREPLP---GWTDNINGP-TGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLS 388 (614)
Q Consensus 314 -~glp~~IvRp~~I~g~~~~p~~---gw~d~~~g~-~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~ 388 (614)
+|+++..++||.|.++...+.. .+......+ ..-...... ........+..++|+|++++.++.....
T Consensus 191 ~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~p~dvA~~v~~L~s~~~~ 263 (281)
T 3s55_A 191 GYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFA-------SLHLQYAPFLKPEEVTRAVLFLVDEASS 263 (281)
T ss_dssp GGTEEEEEEEECSBCSTTTSSHHHHHC-------CCHHHHHHHHH-------HHCSSSCSCBCHHHHHHHHHHHHSGGGT
T ss_pred hcCcEEEEEecCcccCccccchhhhccccccccccchhHHHHHHH-------hhhccCcCCCCHHHHHHHHHHHcCCccc
Confidence 5899999999999887543100 000000000 000000000 0111225688999999999998865432
Q ss_pred cCCCCccEEEeccC
Q psy6053 389 QKEHRQSIVHLTSS 402 (614)
Q Consensus 389 ~~~~~~~vyni~~~ 402 (614)
...++++++.++
T Consensus 264 --~itG~~i~vdgG 275 (281)
T 3s55_A 264 --HITGTVLPIDAG 275 (281)
T ss_dssp --TCCSCEEEESTT
T ss_pred --CCCCCEEEECCC
Confidence 135889999888
No 126
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=99.77 E-value=7.9e-18 Score=168.08 Aligned_cols=220 Identities=15% Similarity=0.133 Sum_probs=150.3
Q ss_pred ccccCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEe
Q psy6053 97 GETFTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPIS 176 (614)
Q Consensus 97 ~~~~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~ 176 (614)
....++|+||||||||+||++++++|++.|++ |+++.|+. ++++++.+ + ...++.++.
T Consensus 9 ~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~---V~~~~r~~------~~~~~~~~---------~----~~~~~~~~~ 66 (249)
T 3f9i_A 9 MIDLTGKTSLITGASSGIGSAIARLLHKLGSK---VIISGSNE------EKLKSLGN---------A----LKDNYTIEV 66 (249)
T ss_dssp CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCE---EEEEESCH------HHHHHHHH---------H----HCSSEEEEE
T ss_pred cccCCCCEEEEECCCChHHHHHHHHHHHCCCE---EEEEcCCH------HHHHHHHH---------H----hccCccEEE
Confidence 34577899999999999999999999999865 88888853 23332211 0 224788999
Q ss_pred CCCCCCCCCCCHHHHHHHhc---cccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHHc---CCCceEEE
Q psy6053 177 GDAEADELAIKESDRQLLAS---EVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKEM---KHLELFVH 243 (614)
Q Consensus 177 gDl~~~~lGLs~~~~~~l~~---~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~V~ 243 (614)
+|+++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++.+... .+..++|+
T Consensus 67 ~D~~~~~------~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~ 140 (249)
T 3f9i_A 67 CNLANKE------ECSNLISKTSNLDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIIN 140 (249)
T ss_dssp CCTTSHH------HHHHHHHTCSCCSEEEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred cCCCCHH------HHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEE
Confidence 9999865 6777776 68999999997542 2446778999999999998877431 24568999
Q ss_pred EeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCCEE
Q psy6053 244 ISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMPCL 319 (614)
Q Consensus 244 vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp~~ 319 (614)
+||..+..... ....|+.||+..|.+++..+. +|+++.
T Consensus 141 isS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~ 182 (249)
T 3f9i_A 141 ISSIVGIAGNP--------------------------------------GQANYCASKAGLIGMTKSLSYEVATRGITVN 182 (249)
T ss_dssp ECCCCC--CCS--------------------------------------CSHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred EccHHhccCCC--------------------------------------CCchhHHHHHHHHHHHHHHHHHHHHcCcEEE
Confidence 99986643210 015799999988888776554 589999
Q ss_pred EeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEe
Q psy6053 320 MLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHL 399 (614)
Q Consensus 320 IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni 399 (614)
+++||.|.++..... .+ ........ ......+..++|+|++++.++..... ...++++++
T Consensus 183 ~v~PG~v~t~~~~~~--------~~-~~~~~~~~---------~~~~~~~~~~~dva~~~~~l~s~~~~--~~tG~~~~v 242 (249)
T 3f9i_A 183 AVAPGFIKSDMTDKL--------NE-KQREAIVQ---------KIPLGTYGIPEDVAYAVAFLASNNAS--YITGQTLHV 242 (249)
T ss_dssp EEEECCBC------C--------CH-HHHHHHHH---------HCTTCSCBCHHHHHHHHHHHHSGGGT--TCCSCEEEE
T ss_pred EEecCccccCccccc--------CH-HHHHHHHh---------cCCCCCCcCHHHHHHHHHHHcCCccC--CccCcEEEE
Confidence 999999976543211 11 11111111 11223577899999999988865432 136889999
Q ss_pred ccC
Q psy6053 400 TSS 402 (614)
Q Consensus 400 ~~~ 402 (614)
.++
T Consensus 243 dgG 245 (249)
T 3f9i_A 243 NGG 245 (249)
T ss_dssp STT
T ss_pred CCC
Confidence 877
No 127
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=99.77 E-value=4.6e-18 Score=170.83 Aligned_cols=221 Identities=12% Similarity=0.089 Sum_probs=155.4
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
+++|+++||||+|+||++++++|++.|.+ |+++.|.... .+.+.+. ++ . ...++.++.+|+
T Consensus 10 l~~k~vlVTGas~gIG~~ia~~l~~~G~~---V~~~~r~~~~---~~~~~~~--------~~----~-~~~~~~~~~~Dv 70 (256)
T 3gaf_A 10 LNDAVAIVTGAAAGIGRAIAGTFAKAGAS---VVVTDLKSEG---AEAVAAA--------IR----Q-AGGKAIGLECNV 70 (256)
T ss_dssp CTTCEEEECSCSSHHHHHHHHHHHHHTCE---EEEEESSHHH---HHHHHHH--------HH----H-TTCCEEEEECCT
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEeCCHHH---HHHHHHH--------HH----h-cCCcEEEEECCC
Confidence 67899999999999999999999999876 8888886421 1222111 11 1 335789999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcccccCh------hHHHHHHHHHhHHHHHHHHHHHHHc---CCCceEEE
Q psy6053 180 EADELAIKESDRQLLAS-------EVDIMIHGAATIRF------DEALKKAVLLNTRGTKMMLSLAKEM---KHLELFVH 243 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~V~ 243 (614)
++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++++... .+..++|+
T Consensus 71 ~d~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~ 144 (256)
T 3gaf_A 71 TDEQ------HREAVIKAALDQFGKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILN 144 (256)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEE
Confidence 9876 6666654 78999999997532 3567788999999999999987431 34569999
Q ss_pred EeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCCEE
Q psy6053 244 ISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMPCL 319 (614)
Q Consensus 244 vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp~~ 319 (614)
+||..+..... ....|+.||+..|.+.+..+. +|+++.
T Consensus 145 isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn 186 (256)
T 3gaf_A 145 ISSMAGENTNV--------------------------------------RMASYGSSKAAVNHLTRNIAFDVGPMGIRVN 186 (256)
T ss_dssp ECCGGGTCCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred EcCHHHcCCCC--------------------------------------CchHHHHHHHHHHHHHHHHHHHHhhhCcEEE
Confidence 99987642210 015799999999988877654 589999
Q ss_pred EeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEe
Q psy6053 320 MLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHL 399 (614)
Q Consensus 320 IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni 399 (614)
.++||.|.++.... ... .......... .....+..++|+|++++.++..... -..++++++
T Consensus 187 ~v~PG~v~T~~~~~-------~~~-~~~~~~~~~~---------~p~~r~~~~~dva~~~~~L~s~~~~--~itG~~i~v 247 (256)
T 3gaf_A 187 AIAPGAIKTDALAT-------VLT-PEIERAMLKH---------TPLGRLGEAQDIANAALFLCSPAAA--WISGQVLTV 247 (256)
T ss_dssp EEEECCBCCHHHHH-------HCC-HHHHHHHHTT---------CTTSSCBCHHHHHHHHHHHHSGGGT--TCCSCEEEE
T ss_pred EEEEccccCchhhh-------ccC-HHHHHHHHhc---------CCCCCCCCHHHHHHHHHHHcCCccc--CccCCEEEE
Confidence 99999886652110 000 1111122221 1223467899999999998865432 136889999
Q ss_pred ccC
Q psy6053 400 TSS 402 (614)
Q Consensus 400 ~~~ 402 (614)
.++
T Consensus 248 dgG 250 (256)
T 3gaf_A 248 SGG 250 (256)
T ss_dssp STT
T ss_pred CCC
Confidence 888
No 128
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=99.77 E-value=6.6e-18 Score=170.03 Aligned_cols=216 Identities=13% Similarity=0.135 Sum_probs=151.1
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
+++|+|+||||||+||++++++|++.|++ |+++.|+.... .+-.++ ...++.++.+|+
T Consensus 10 ~~~k~vlVTGasggiG~~~a~~l~~~G~~---V~~~~r~~~~~--~~~~~~-----------------~~~~~~~~~~D~ 67 (265)
T 2o23_A 10 VKGLVAVITGGASGLGLATAERLVGQGAS---AVLLDLPNSGG--EAQAKK-----------------LGNNCVFAPADV 67 (265)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEECTTSSH--HHHHHH-----------------HCTTEEEEECCT
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCE---EEEEeCCcHhH--HHHHHH-----------------hCCceEEEEcCC
Confidence 56899999999999999999999999876 88999976431 111111 124688999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcccccC-------------hhHHHHHHHHHhHHHHHHHHHHHHHc---C
Q psy6053 180 EADELAIKESDRQLLAS-------EVDIMIHGAATIR-------------FDEALKKAVLLNTRGTKMMLSLAKEM---K 236 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~-------------~~~~~~~~~~~Nv~gt~~ll~la~~~---~ 236 (614)
++++ +++.+++ ++|+|||+||... ..+.++..+++|+.|+.++++++... .
T Consensus 68 ~~~~------~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~ 141 (265)
T 2o23_A 68 TSEK------DVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQN 141 (265)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTS
T ss_pred CCHH------HHHHHHHHHHHHCCCCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence 9865 6777665 7999999999652 23457788999999999999988763 1
Q ss_pred ------CCceEEEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHH
Q psy6053 237 ------HLELFVHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVE 310 (614)
Q Consensus 237 ------~~k~~V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~ 310 (614)
+..++|++||.++..... ....|+.||+..|.+.+.
T Consensus 142 ~~~~~~~~~~iv~isS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~~~ 183 (265)
T 2o23_A 142 EPDQGGQRGVIINTASVAAFEGQV--------------------------------------GQAAYSASKGGIVGMTLP 183 (265)
T ss_dssp CCCTTSCCEEEEEECCTHHHHCCT--------------------------------------TCHHHHHHHHHHHHHHHH
T ss_pred ccccCCCCcEEEEeCChhhcCCCC--------------------------------------CCchhHHHHHHHHHHHHH
Confidence 457899999987643210 015799999988888776
Q ss_pred Hhh----CCCCEEEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhh
Q psy6053 311 AMN----NGMPCLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAY 386 (614)
Q Consensus 311 ~~~----~glp~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~ 386 (614)
... .|+++++++||.|.++.....+ ........... + ....++.++|+|++++.++...
T Consensus 184 la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---------~~~~~~~~~~~----~----~~~~~~~~~dva~~~~~l~~~~ 246 (265)
T 2o23_A 184 IARDLAPIGIRVMTIAPGLFGTPLLTSLP---------EKVCNFLASQV----P----FPSRLGDPAEYAHLVQAIIENP 246 (265)
T ss_dssp HHHHHGGGTEEEEEEEECCBCCC-------------------CHHHHTC----S----SSCSCBCHHHHHHHHHHHHHCT
T ss_pred HHHHHhhcCcEEEEEEeccccCccccccC---------HHHHHHHHHcC----C----CcCCCCCHHHHHHHHHHHhhcC
Confidence 554 5899999999998665321110 00000001100 0 0023678999999999988543
Q ss_pred hhcCCCCccEEEeccC
Q psy6053 387 LSQKEHRQSIVHLTSS 402 (614)
Q Consensus 387 ~~~~~~~~~vyni~~~ 402 (614)
. ..++++++.++
T Consensus 247 ~----~~G~~i~vdgG 258 (265)
T 2o23_A 247 F----LNGEVIRLDGA 258 (265)
T ss_dssp T----CCSCEEEESTT
T ss_pred c----cCceEEEECCC
Confidence 3 36788988776
No 129
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=99.77 E-value=8.6e-18 Score=169.37 Aligned_cols=226 Identities=12% Similarity=0.105 Sum_probs=153.4
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
+++|+||||||||+||++++++|++.|++ |+++.|.. +++++..+. ...++.++.+|+
T Consensus 10 l~~k~vlVTGas~gIG~~ia~~l~~~G~~---V~~~~r~~------~~~~~~~~~-------------~~~~~~~~~~D~ 67 (263)
T 3ak4_A 10 LSGRKAIVTGGSKGIGAAIARALDKAGAT---VAIADLDV------MAAQAVVAG-------------LENGGFAVEVDV 67 (263)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCH------HHHHHHHHT-------------CTTCCEEEECCT
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCE---EEEEeCCH------HHHHHHHHH-------------HhcCCeEEEEeC
Confidence 46899999999999999999999999875 88888863 223322110 223678899999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHHc---CC-CceE
Q psy6053 180 EADELAIKESDRQLLAS-------EVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKEM---KH-LELF 241 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~-~k~~ 241 (614)
++++ +++.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++... .+ ..++
T Consensus 68 ~d~~------~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~i 141 (263)
T 3ak4_A 68 TKRA------SVDAAMQKAIDALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVI 141 (263)
T ss_dssp TCHH------HHHHHHHHHHHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEE
Confidence 9865 6777665 79999999996532 2467788999999999999887652 13 5799
Q ss_pred EEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCC
Q psy6053 242 VHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMP 317 (614)
Q Consensus 242 V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp 317 (614)
|++||..+.... | ....|+.||+..|.+.+..+. .|++
T Consensus 142 v~isS~~~~~~~----------~----------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~ 183 (263)
T 3ak4_A 142 VNTASLAAKVGA----------P----------------------------LLAHYSASKFAVFGWTQALAREMAPKNIR 183 (263)
T ss_dssp EEECCGGGTSCC----------T----------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCE
T ss_pred EEecccccccCC----------C----------------------------CchhHHHHHHHHHHHHHHHHHHHhHcCeE
Confidence 999998653221 0 015799999999988877654 5999
Q ss_pred EEEeecceeecccCCCCcccc--CCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCcc
Q psy6053 318 CLMLRPSIIIPVWREPLPGWT--DNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQS 395 (614)
Q Consensus 318 ~~IvRp~~I~g~~~~p~~gw~--d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~ 395 (614)
++++|||.|.++.......|. ..-..+.........+ .....+++++|+|++++.++..... ...++
T Consensus 184 v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~p~~~~~~~~dvA~~v~~l~s~~~~--~~tG~ 252 (263)
T 3ak4_A 184 VNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSL---------TPLGRIEEPEDVADVVVFLASDAAR--FMTGQ 252 (263)
T ss_dssp EEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHHHHHT---------CTTCSCBCHHHHHHHHHHHHSGGGT--TCCSC
T ss_pred EEEEecccccChhhhhhccccccccccCcHHHHHHHHhc---------CCCCCCcCHHHHHHHHHHHhCcccc--CCCCC
Confidence 999999999765321000000 0000000111111111 1123478999999999988865431 13678
Q ss_pred EEEeccC
Q psy6053 396 IVHLTSS 402 (614)
Q Consensus 396 vyni~~~ 402 (614)
++++.++
T Consensus 253 ~~~vdgG 259 (263)
T 3ak4_A 253 GINVTGG 259 (263)
T ss_dssp EEEESSS
T ss_pred EEEECcC
Confidence 9999877
No 130
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2
Probab=99.77 E-value=1.2e-17 Score=165.98 Aligned_cols=198 Identities=15% Similarity=0.156 Sum_probs=143.1
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCc----cEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeC
Q psy6053 102 GKTLFMTGASGFLGKVLLEKILRKSPNV----KKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISG 177 (614)
Q Consensus 102 ~~~VLITGaTGFlG~~Ll~~Ll~~g~~v----~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~g 177 (614)
+|+|+||||||+||++++++|++.|+.- .+|+++.|+. ++++++.+ .++ . ...++.++.+
T Consensus 2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~------~~~~~~~~-----~~~----~-~~~~~~~~~~ 65 (244)
T 2bd0_A 2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTA------ADLEKISL-----ECR----A-EGALTDTITA 65 (244)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCH------HHHHHHHH-----HHH----T-TTCEEEEEEC
T ss_pred CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCH------HHHHHHHH-----HHH----c-cCCeeeEEEe
Confidence 6899999999999999999999998710 0488888863 22222111 111 1 2357899999
Q ss_pred CCCCCCCCCCHHHHHHHhc-------cccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHHc---CCCce
Q psy6053 178 DAEADELAIKESDRQLLAS-------EVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKEM---KHLEL 240 (614)
Q Consensus 178 Dl~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~ 240 (614)
|+++++ +++.+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+... .+..+
T Consensus 66 D~~~~~------~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ 139 (244)
T 2bd0_A 66 DISDMA------DVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGH 139 (244)
T ss_dssp CTTSHH------HHHHHHHHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEE
T ss_pred cCCCHH------HHHHHHHHHHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCE
Confidence 999865 6666665 69999999996532 3567788999999999999887531 25679
Q ss_pred EEEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCC
Q psy6053 241 FVHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGM 316 (614)
Q Consensus 241 ~V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~gl 316 (614)
+|++||..+..... ....|+.||+..|.+++.... .|+
T Consensus 140 iv~isS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi 181 (244)
T 2bd0_A 140 IFFITSVAATKAFR--------------------------------------HSSIYCMSKFGQRGLVETMRLYARKCNV 181 (244)
T ss_dssp EEEECCGGGTSCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHHTTTTE
T ss_pred EEEEecchhcCCCC--------------------------------------CCchhHHHHHHHHHHHHHHHHHhhccCc
Confidence 99999987643210 015799999999998865543 589
Q ss_pred CEEEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhh
Q psy6053 317 PCLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAY 386 (614)
Q Consensus 317 p~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~ 386 (614)
+++++|||.|.++.....+ . .. ...+++++|+|++++.++...
T Consensus 182 ~v~~v~Pg~v~t~~~~~~~-------~-------------------~~-~~~~~~~~dva~~~~~l~~~~ 224 (244)
T 2bd0_A 182 RITDVQPGAVYTPMWGKVD-------D-------------------EM-QALMMMPEDIAAPVVQAYLQP 224 (244)
T ss_dssp EEEEEEECCBCSTTTCCCC-------S-------------------TT-GGGSBCHHHHHHHHHHHHTSC
T ss_pred EEEEEECCCccchhhhhcc-------c-------------------cc-cccCCCHHHHHHHHHHHHhCC
Confidence 9999999999886432110 0 00 135789999999999988654
No 131
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}
Probab=99.77 E-value=2.7e-18 Score=170.76 Aligned_cols=217 Identities=14% Similarity=0.137 Sum_probs=145.5
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEE-EccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEE-EeCCC
Q psy6053 102 GKTLFMTGASGFLGKVLLEKILRKSPNVKKIYIL-MRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLP-ISGDA 179 (614)
Q Consensus 102 ~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~L-vR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~-v~gDl 179 (614)
+|+|+||||||+||++++++|++.|++ |+++ .|+.. +++++.+ .++. ...++.. +.+|+
T Consensus 1 ~k~vlITGasggiG~~~a~~l~~~G~~---v~~~~~r~~~------~~~~~~~-----~~~~-----~~~~~~~~~~~D~ 61 (245)
T 2ph3_A 1 MRKALITGASRGIGRAIALRLAEDGFA---LAIHYGQNRE------KAEEVAE-----EARR-----RGSPLVAVLGANL 61 (245)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHTTTCE---EEEEESSCHH------HHHHHHH-----HHHH-----TTCSCEEEEECCT
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCE---EEEEcCCCHH------HHHHHHH-----HHHh-----cCCceEEEEeccC
Confidence 478999999999999999999999876 7776 66532 2222110 1111 1234566 89999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcccccCh-------hHHHHHHHHHhHHHHHHH----HHHHHHcCCCceE
Q psy6053 180 EADELAIKESDRQLLAS-------EVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMM----LSLAKEMKHLELF 241 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~l----l~la~~~~~~k~~ 241 (614)
++++ +++.+++ ++|+|||+||.... .+.++..+++|+.|+.++ ++.+++ .+.+++
T Consensus 62 ~~~~------~~~~~~~~~~~~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~-~~~~~i 134 (245)
T 2ph3_A 62 LEAE------AATALVHQAAEVLGGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMK-ARFGRI 134 (245)
T ss_dssp TSHH------HHHHHHHHHHHHHTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-HTCEEE
T ss_pred CCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHh-cCCCEE
Confidence 9865 6666543 79999999996532 345678899999995554 455555 367899
Q ss_pred EEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCC
Q psy6053 242 VHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMP 317 (614)
Q Consensus 242 V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp 317 (614)
|++||..+..... ....|+.||+..|.+.+.... .|++
T Consensus 135 v~~sS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~ 176 (245)
T 2ph3_A 135 VNITSVVGILGNP--------------------------------------GQANYVASKAGLIGFTRAVAKEYAQRGIT 176 (245)
T ss_dssp EEECCTHHHHCCS--------------------------------------SBHHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred EEEeChhhccCCC--------------------------------------CCcchHHHHHHHHHHHHHHHHHHHHcCeE
Confidence 9999985432210 015799999988888876654 4899
Q ss_pred EEEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEE
Q psy6053 318 CLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIV 397 (614)
Q Consensus 318 ~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vy 397 (614)
++++|||.|.++.... . +.........+. ....+++++|+|++++.++..... ...+++|
T Consensus 177 v~~v~Pg~v~t~~~~~-------~--~~~~~~~~~~~~---------~~~~~~~~~dva~~~~~l~~~~~~--~~~G~~~ 236 (245)
T 2ph3_A 177 VNAVAPGFIETEMTER-------L--PQEVKEAYLKQI---------PAGRFGRPEEVAEAVAFLVSEKAG--YITGQTL 236 (245)
T ss_dssp EEEEEECSBCCHHHHT-------S--CHHHHHHHHHTC---------TTCSCBCHHHHHHHHHHHTSGGGT--TCCSCEE
T ss_pred EEEEEEEeecCcchhh-------c--CHHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHhCcccc--cccCCEE
Confidence 9999999997764321 1 111111221111 123578999999999988865321 1257899
Q ss_pred EeccC
Q psy6053 398 HLTSS 402 (614)
Q Consensus 398 ni~~~ 402 (614)
++.++
T Consensus 237 ~v~gg 241 (245)
T 2ph3_A 237 CVDGG 241 (245)
T ss_dssp EESTT
T ss_pred EECCC
Confidence 99876
No 132
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=99.76 E-value=1e-17 Score=170.62 Aligned_cols=234 Identities=15% Similarity=0.151 Sum_probs=153.1
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
+.+|++|||||+|+||++++++|++.|.+ |+++.|... +++++..+ .+.. . ...++.++.+|+
T Consensus 23 l~~k~~lVTGas~GIG~~ia~~la~~G~~---V~~~~r~~~-----~~~~~~~~-----~~~~-~---~~~~~~~~~~Dv 85 (281)
T 3v2h_A 23 MMTKTAVITGSTSGIGLAIARTLAKAGAN---IVLNGFGAP-----DEIRTVTD-----EVAG-L---SSGTVLHHPADM 85 (281)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCE---EEEECCCCH-----HHHHHHHH-----HHHT-T---CSSCEEEECCCT
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEeCCCh-----HHHHHHHH-----HHhh-c---cCCcEEEEeCCC
Confidence 56899999999999999999999999875 888888532 12222111 0110 0 235789999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHHc---CCCceEE
Q psy6053 180 EADELAIKESDRQLLAS-------EVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKEM---KHLELFV 242 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~V 242 (614)
++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++.+... .+..++|
T Consensus 86 ~d~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv 159 (281)
T 3v2h_A 86 TKPS------EIADMMAMVADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRII 159 (281)
T ss_dssp TCHH------HHHHHHHHHHHHTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred CCHH------HHHHHHHHHHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEE
Confidence 9976 6766665 68999999997532 3567788999999999999987321 2557899
Q ss_pred EEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCCE
Q psy6053 243 HISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMPC 318 (614)
Q Consensus 243 ~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp~ 318 (614)
++||..+.... | ....|+.||+..+.+.+..+. +|+++
T Consensus 160 ~isS~~~~~~~----------~----------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~v 201 (281)
T 3v2h_A 160 NIASAHGLVAS----------P----------------------------FKSAYVAAKHGIMGLTKTVALEVAESGVTV 201 (281)
T ss_dssp EECCGGGTSCC----------T----------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred EECCcccccCC----------C----------------------------CchHHHHHHHHHHHHHHHHHHHhhhcCcEE
Confidence 99998653221 0 015799999999988877654 58999
Q ss_pred EEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEE
Q psy6053 319 LMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVH 398 (614)
Q Consensus 319 ~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyn 398 (614)
..++||.|.++....... ......+.. .................+..++|+|++++.++..... ...+++++
T Consensus 202 n~v~PG~v~t~~~~~~~~---~~~~~~~~~---~~~~~~~~~~~~~p~~r~~~~edvA~~v~~L~s~~a~--~itG~~i~ 273 (281)
T 3v2h_A 202 NSICPGYVLTPLVEKQIP---DQARTRGIT---EEQVINEVMLKGQPTKKFITVEQVASLALYLAGDDAA--QITGTHVS 273 (281)
T ss_dssp EEEEECSBCC----------------------------------CCTTCSCBCHHHHHHHHHHHHSSGGG--GCCSCEEE
T ss_pred EEEECCCCcCcchhhhcc---hhhhhcCCC---HHHHHHHHHHhcCCCCCccCHHHHHHHHHHHcCCCcC--CCCCcEEE
Confidence 999999998764321100 000000000 0000011122334446789999999999988865432 13688999
Q ss_pred eccC
Q psy6053 399 LTSS 402 (614)
Q Consensus 399 i~~~ 402 (614)
+.+|
T Consensus 274 vdGG 277 (281)
T 3v2h_A 274 MDGG 277 (281)
T ss_dssp ESTT
T ss_pred ECCC
Confidence 9877
No 133
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=99.76 E-value=1.9e-17 Score=166.86 Aligned_cols=211 Identities=13% Similarity=0.147 Sum_probs=147.8
Q ss_pred ccccCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEe
Q psy6053 97 GETFTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPIS 176 (614)
Q Consensus 97 ~~~~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~ 176 (614)
...+++|+|+||||||+||++++++|++.|.+..+|+++.|+..... .++++.. ...++.++.
T Consensus 16 ~~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~---~~~~l~~--------------~~~~~~~~~ 78 (267)
T 1sny_A 16 PRGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAK---ELEDLAK--------------NHSNIHILE 78 (267)
T ss_dssp ----CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCH---HHHHHHH--------------HCTTEEEEE
T ss_pred ccCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhH---HHHHhhc--------------cCCceEEEE
Confidence 34467899999999999999999999999832235999999865432 2322211 124689999
Q ss_pred CCCCCCCCCCCHHHHHHHhc---------cccEEEEcccccC--------hhHHHHHHHHHhHHHHHHHHHHHHHc---C
Q psy6053 177 GDAEADELAIKESDRQLLAS---------EVDIMIHGAATIR--------FDEALKKAVLLNTRGTKMMLSLAKEM---K 236 (614)
Q Consensus 177 gDl~~~~lGLs~~~~~~l~~---------~vd~ViH~AA~v~--------~~~~~~~~~~~Nv~gt~~ll~la~~~---~ 236 (614)
+|+++++ +++.+++ ++|+|||+||... ..+.++..+++|+.|+.++++++... .
T Consensus 79 ~Dl~~~~------~v~~~~~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~ 152 (267)
T 1sny_A 79 IDLRNFD------AYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKA 152 (267)
T ss_dssp CCTTCGG------GHHHHHHHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred ecCCChH------HHHHHHHHHHHhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhc
Confidence 9999976 6666665 6999999999754 13567778999999999999988653 0
Q ss_pred ------C-----CceEEEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHH
Q psy6053 237 ------H-----LELFVHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSE 305 (614)
Q Consensus 237 ------~-----~k~~V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE 305 (614)
+ ..++|++||..+...... . .....|+.||+..|
T Consensus 153 ~~~~~~~~~~~~~~~iv~isS~~~~~~~~~-------~----------------------------~~~~~Y~~sK~a~~ 197 (267)
T 1sny_A 153 AKANESQPMGVGRAAIINMSSILGSIQGNT-------D----------------------------GGMYAYRTSKSALN 197 (267)
T ss_dssp HHHTTTSCSSTTTCEEEEECCGGGCSTTCC-------S----------------------------CCCHHHHHHHHHHH
T ss_pred ccccccccccCCCceEEEEecccccccCCC-------C----------------------------CCchHHHHHHHHHH
Confidence 1 468999999866432110 0 00147999999999
Q ss_pred HHHHHHhh----CCCCEEEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHH
Q psy6053 306 GLVVEAMN----NGMPCLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFV 381 (614)
Q Consensus 306 ~lv~~~~~----~glp~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~ 381 (614)
.+++..+. .|++++++|||.|..+... . ...+..+++|+.++.
T Consensus 198 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-----------~----------------------~~~~~~~~~a~~~~~ 244 (267)
T 1sny_A 198 AATKSLSVDLYPQRIMCVSLHPGWVKTDMGG-----------S----------------------SAPLDVPTSTGQIVQ 244 (267)
T ss_dssp HHHHHHHHHHGGGTCEEEEECCCSBCSTTTC-----------T----------------------TCSBCHHHHHHHHHH
T ss_pred HHHHHHHHHhhcCCcEEEEeCCcceecCCCC-----------C----------------------CCCCCHHHHHHHHHH
Confidence 99887654 4899999999988543210 0 124678999999999
Q ss_pred HHHhhhhcCCCCccEEEec
Q psy6053 382 AIWAYLSQKEHRQSIVHLT 400 (614)
Q Consensus 382 ~~~~~~~~~~~~~~vyni~ 400 (614)
++..... ...+..+++.
T Consensus 245 ~~~~~~~--~~~G~~~~~~ 261 (267)
T 1sny_A 245 TISKLGE--KQNGGFVNYD 261 (267)
T ss_dssp HHHHCCG--GGTTCEECTT
T ss_pred HHHhcCc--CCCCcEEccC
Confidence 8876432 1245555543
No 134
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=99.76 E-value=6.9e-18 Score=168.38 Aligned_cols=221 Identities=14% Similarity=0.130 Sum_probs=152.0
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCCC
Q psy6053 102 GKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAEA 181 (614)
Q Consensus 102 ~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~~ 181 (614)
+|+|+||||||+||++++++|++.|++ |+++.|+.. ++++..+ .+. .. ...++.++.+|+++
T Consensus 2 ~k~vlItGasggiG~~~a~~l~~~G~~---V~~~~r~~~------~~~~~~~-----~~~---~~-~~~~~~~~~~D~~~ 63 (250)
T 2cfc_A 2 SRVAIVTGASSGNGLAIATRFLARGDR---VAALDLSAE------TLEETAR-----THW---HA-YADKVLRVRADVAD 63 (250)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCHH------HHHHHHH-----HHS---TT-TGGGEEEEECCTTC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCE---EEEEeCCHH------HHHHHHH-----HHH---Hh-cCCcEEEEEecCCC
Confidence 689999999999999999999999865 888888642 2222111 010 01 23468999999998
Q ss_pred CCCCCCHHHHHHHhc-------cccEEEEcccccCh----------hHHHHHHHHHhHHHHHHHHHHHHHc---CCCceE
Q psy6053 182 DELAIKESDRQLLAS-------EVDIMIHGAATIRF----------DEALKKAVLLNTRGTKMMLSLAKEM---KHLELF 241 (614)
Q Consensus 182 ~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~----------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~ 241 (614)
++ +++.+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+... .+.+++
T Consensus 64 ~~------~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~i 137 (250)
T 2cfc_A 64 EG------DVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVI 137 (250)
T ss_dssp HH------HHHHHHHHHHHHHSCCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEE
T ss_pred HH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEE
Confidence 65 6766665 78999999986431 2456778999999998776665431 256899
Q ss_pred EEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCC
Q psy6053 242 VHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMP 317 (614)
Q Consensus 242 V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp 317 (614)
|++||..+..... ....|+.||+..|.+++.... .|++
T Consensus 138 v~isS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~ 179 (250)
T 2cfc_A 138 VNIASVASLVAFP--------------------------------------GRSAYTTSKGAVLQLTKSVAVDYAGSGIR 179 (250)
T ss_dssp EEECCGGGTSCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred EEECChhhccCCC--------------------------------------CchhHHHHHHHHHHHHHHHHHHhcccCeE
Confidence 9999986543210 015799999999999887654 4899
Q ss_pred EEEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEE
Q psy6053 318 CLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIV 397 (614)
Q Consensus 318 ~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vy 397 (614)
++++|||.|+++.... .. .. ..+...+..+. ....+...+|+|++++.++..... ...++++
T Consensus 180 v~~v~Pg~v~t~~~~~---~~---~~-~~~~~~~~~~~---------~~~~~~~~~dva~~~~~l~~~~~~--~~~G~~~ 241 (250)
T 2cfc_A 180 CNAVCPGMIETPMTQW---RL---DQ-PELRDQVLARI---------PQKEIGTAAQVADAVMFLAGEDAT--YVNGAAL 241 (250)
T ss_dssp EEEEEECSBCSTTTHH---HH---TS-HHHHHHHHTTC---------TTCSCBCHHHHHHHHHHHHSTTCT--TCCSCEE
T ss_pred EEEEEeCcCccCcccc---cc---CC-HHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHcCchhh--cccCCEE
Confidence 9999999998874311 00 00 11222222211 112467899999999988865321 1257899
Q ss_pred EeccC
Q psy6053 398 HLTSS 402 (614)
Q Consensus 398 ni~~~ 402 (614)
++.++
T Consensus 242 ~v~gG 246 (250)
T 2cfc_A 242 VMDGA 246 (250)
T ss_dssp EESTT
T ss_pred EECCc
Confidence 98776
No 135
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=99.76 E-value=6.1e-18 Score=168.87 Aligned_cols=220 Identities=14% Similarity=0.094 Sum_probs=151.2
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
+++|+|+||||||+||++++++|++.|++ |+++.|+.. ++++..+ +.. ...++.++.+|+
T Consensus 4 ~~~k~vlVtGasggiG~~~a~~l~~~G~~---V~~~~r~~~------~~~~~~~---------~~~--~~~~~~~~~~D~ 63 (251)
T 1zk4_A 4 LDGKVAIITGGTLGIGLAIATKFVEEGAK---VMITGRHSD------VGEKAAK---------SVG--TPDQIQFFQHDS 63 (251)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCE---EEEEESCHH------HHHHHHH---------HHC--CTTTEEEEECCT
T ss_pred CCCcEEEEeCCCChHHHHHHHHHHHCCCE---EEEEeCCHH------HHHHHHH---------Hhh--ccCceEEEECCC
Confidence 56899999999999999999999999876 888888632 2222111 001 114789999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHHc---CCC-ceE
Q psy6053 180 EADELAIKESDRQLLAS-------EVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKEM---KHL-ELF 241 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~-k~~ 241 (614)
++++ +++.+++ .+|+|||+||.... .+.++..+++|+.|+.++.+.+... .+. +++
T Consensus 64 ~~~~------~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~i 137 (251)
T 1zk4_A 64 SDED------GWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASI 137 (251)
T ss_dssp TCHH------HHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEE
T ss_pred CCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEE
Confidence 9865 6666665 48999999996431 3556788999999888776665431 244 789
Q ss_pred EEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHh------hCC
Q psy6053 242 VHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAM------NNG 315 (614)
Q Consensus 242 V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~------~~g 315 (614)
|++||..+..... ....|+.||+..|.+++... ..|
T Consensus 138 v~isS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~~~~a~e~~~~~~~ 179 (251)
T 1zk4_A 138 INMSSIEGFVGDP--------------------------------------SLGAYNASKGAVRIMSKSAALDCALKDYD 179 (251)
T ss_dssp EEECCGGGTSCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred EEeCCchhccCCC--------------------------------------CCccchHHHHHHHHHHHHHHHHhcccCCC
Confidence 9999986543210 01579999999998887654 348
Q ss_pred CCEEEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCcc
Q psy6053 316 MPCLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQS 395 (614)
Q Consensus 316 lp~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~ 395 (614)
++++++|||.|.++..... .. ........ .......+++++|+|++++.++..... ...++
T Consensus 180 i~v~~v~Pg~v~t~~~~~~-------~~--~~~~~~~~--------~~~~~~~~~~~~dva~~~~~l~~~~~~--~~~G~ 240 (251)
T 1zk4_A 180 VRVNTVHPGYIKTPLVDDL-------PG--AEEAMSQR--------TKTPMGHIGEPNDIAYICVYLASNESK--FATGS 240 (251)
T ss_dssp EEEEEEEECCBCCHHHHTS-------TT--HHHHHTST--------TTCTTSSCBCHHHHHHHHHHHHSGGGT--TCCSC
T ss_pred eEEEEEeeCcCcchhhhhc-------Cc--hhhhHHHh--------hcCCCCCCcCHHHHHHHHHHHcCcccc--cccCc
Confidence 9999999999987643211 11 11111011 111123478999999999998865431 12578
Q ss_pred EEEeccC
Q psy6053 396 IVHLTSS 402 (614)
Q Consensus 396 vyni~~~ 402 (614)
++++.++
T Consensus 241 ~~~v~gG 247 (251)
T 1zk4_A 241 EFVVDGG 247 (251)
T ss_dssp EEEESTT
T ss_pred EEEECCC
Confidence 9999877
No 136
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}
Probab=99.76 E-value=1.7e-17 Score=168.51 Aligned_cols=220 Identities=12% Similarity=0.076 Sum_probs=152.1
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
+++|+|+||||||+||++++++|++.|++ |+++.|..... +.+.+.++ . ...++.++.+|+
T Consensus 32 l~~k~vlITGasggIG~~la~~L~~~G~~---V~~~~r~~~~~---~~~~~~~~--------~-----~~~~~~~~~~Dl 92 (279)
T 3ctm_A 32 LKGKVASVTGSSGGIGWAVAEAYAQAGAD---VAIWYNSHPAD---EKAEHLQK--------T-----YGVHSKAYKCNI 92 (279)
T ss_dssp CTTCEEEETTTTSSHHHHHHHHHHHHTCE---EEEEESSSCCH---HHHHHHHH--------H-----HCSCEEEEECCT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEeCCHHHH---HHHHHHHH--------h-----cCCcceEEEeec
Confidence 57899999999999999999999999876 88899976432 22222111 0 224688999999
Q ss_pred CCCCCCCCHHHHHHHhcc-------ccEEEEcccccCh---------hHHHHHHHHHhHHH----HHHHHHHHHHcCCCc
Q psy6053 180 EADELAIKESDRQLLASE-------VDIMIHGAATIRF---------DEALKKAVLLNTRG----TKMMLSLAKEMKHLE 239 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~~-------vd~ViH~AA~v~~---------~~~~~~~~~~Nv~g----t~~ll~la~~~~~~k 239 (614)
++++ +++.++++ +|+|||+||.... .+.++..+++|+.| ++++++.+++. +.+
T Consensus 93 ~~~~------~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~~ 165 (279)
T 3ctm_A 93 SDPK------SVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKN-GKG 165 (279)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCC
T ss_pred CCHH------HHHHHHHHHHHHhCCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCC
Confidence 9865 66666653 8999999996533 24456789999999 56777777763 678
Q ss_pred eEEEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CC
Q psy6053 240 LFVHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NG 315 (614)
Q Consensus 240 ~~V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~g 315 (614)
++|++||..+..... .+ ....|+.||+..|.+++.... .+
T Consensus 166 ~iv~isS~~~~~~~~--------~~----------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~~ 209 (279)
T 3ctm_A 166 SLIITSSISGKIVNI--------PQ----------------------------LQAPYNTAKAACTHLAKSLAIEWAPFA 209 (279)
T ss_dssp EEEEECCCTTSCC-----------C----------------------------CHHHHHHHHHHHHHHHHHHHHHTTTTC
T ss_pred eEEEECchHhccCCC--------CC----------------------------CcccHHHHHHHHHHHHHHHHHHhcccC
Confidence 999999986532200 00 015799999999999987765 46
Q ss_pred CCEEEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCcc
Q psy6053 316 MPCLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQS 395 (614)
Q Consensus 316 lp~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~ 395 (614)
++.+++||.|.++... . .. ........... ....+++++|+|++++.++..... ...++
T Consensus 210 -~v~~v~Pg~v~t~~~~-------~-~~-~~~~~~~~~~~---------p~~~~~~~~dvA~~~~~l~s~~~~--~~tG~ 268 (279)
T 3ctm_A 210 -RVNTISPGYIDTDITD-------F-AS-KDMKAKWWQLT---------PLGREGLTQELVGGYLYLASNAST--FTTGS 268 (279)
T ss_dssp -EEEEEEECSBSSTTTS-------S-CC-HHHHHHHHHHS---------TTCSCBCGGGTHHHHHHHHSGGGT--TCCSC
T ss_pred -CEEEEeccCCcccccc-------c-cC-hHHHHHHHHhC---------CccCCcCHHHHHHHHHHHhCcccc--CccCC
Confidence 9999999998665321 1 11 11111111100 112378899999999998865432 13678
Q ss_pred EEEeccC
Q psy6053 396 IVHLTSS 402 (614)
Q Consensus 396 vyni~~~ 402 (614)
++++.++
T Consensus 269 ~i~vdgG 275 (279)
T 3ctm_A 269 DVVIDGG 275 (279)
T ss_dssp EEEESTT
T ss_pred EEEECCC
Confidence 9999877
No 137
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=99.76 E-value=1.5e-17 Score=168.74 Aligned_cols=220 Identities=11% Similarity=0.065 Sum_probs=151.7
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEc-cCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMR-QKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGD 178 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR-~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gD 178 (614)
+++|+|+||||+|+||++++++|++.|++ |+++.| +. ++++++.+ .+... ...++.++.+|
T Consensus 9 ~~~k~~lVTGas~gIG~~ia~~l~~~G~~---V~~~~r~~~------~~~~~~~~-----~~~~~----~~~~~~~~~~D 70 (276)
T 1mxh_A 9 SECPAAVITGGARRIGHSIAVRLHQQGFR---VVVHYRHSE------GAAQRLVA-----ELNAA----RAGSAVLCKGD 70 (276)
T ss_dssp --CCEEEETTCSSHHHHHHHHHHHHTTCE---EEEEESSCH------HHHHHHHH-----HHHHH----STTCEEEEECC
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEeCCCh------HHHHHHHH-----HHHHh----cCCceEEEecc
Confidence 56899999999999999999999999875 888888 42 22222211 11110 12468899999
Q ss_pred CCCC----CCCCCHHHHHHHhc-------cccEEEEcccccCh-------h-----------HHHHHHHHHhHHHHHHHH
Q psy6053 179 AEAD----ELAIKESDRQLLAS-------EVDIMIHGAATIRF-------D-----------EALKKAVLLNTRGTKMML 229 (614)
Q Consensus 179 l~~~----~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~-------~-----------~~~~~~~~~Nv~gt~~ll 229 (614)
++++ + +++.+++ ++|++||+||.... . +.++..+++|+.|+.+++
T Consensus 71 l~~~~~~~~------~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~ 144 (276)
T 1mxh_A 71 LSLSSSLLD------CCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLI 144 (276)
T ss_dssp CSSSTTHHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHH
T ss_pred CCCccccHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHH
Confidence 9997 5 5665554 68999999996432 1 567788999999999999
Q ss_pred HHHHHc--CCC------ceEEEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhH
Q psy6053 230 SLAKEM--KHL------ELFVHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTK 301 (614)
Q Consensus 230 ~la~~~--~~~------k~~V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK 301 (614)
+++... .+. .++|++||..+.... | ....|+.||
T Consensus 145 ~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~----------------------------~~~~Y~asK 186 (276)
T 1mxh_A 145 RAFARRQGEGGAWRSRNLSVVNLCDAMTDLPL----------P----------------------------GFCVYTMAK 186 (276)
T ss_dssp HHHHHTC-------CCCEEEEEECCGGGGSCC----------T----------------------------TCHHHHHHH
T ss_pred HHHHHHHhcCCCCCCCCcEEEEECchhhcCCC----------C----------------------------CCeehHHHH
Confidence 999873 123 689999998764321 0 014799999
Q ss_pred HHHHHHHHHHhh----CCCCEEEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHH
Q psy6053 302 CLSEGLVVEAMN----NGMPCLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITIN 377 (614)
Q Consensus 302 ~~aE~lv~~~~~----~glp~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~ 377 (614)
+..+.+.+..+. .|+++++++||.|.++ . . ..+ .......... ....++..++|+|+
T Consensus 187 ~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~-~----~-----~~~-~~~~~~~~~~--------p~~r~~~~~~dva~ 247 (276)
T 1mxh_A 187 HALGGLTRAAALELAPRHIRVNAVAPGLSLLP-P----A-----MPQ-ETQEEYRRKV--------PLGQSEASAAQIAD 247 (276)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC-S----S-----SCH-HHHHHHHTTC--------TTTSCCBCHHHHHH
T ss_pred HHHHHHHHHHHHHHhhcCeEEEEEecCcccCC-c----c-----CCH-HHHHHHHhcC--------CCCCCCCCHHHHHH
Confidence 999998877654 4899999999999876 2 1 111 1222222211 01123788999999
Q ss_pred HHHHHHHhhhhcCCCCccEEEeccC
Q psy6053 378 GIFVAIWAYLSQKEHRQSIVHLTSS 402 (614)
Q Consensus 378 aii~~~~~~~~~~~~~~~vyni~~~ 402 (614)
+++.++..... ...+.++++.++
T Consensus 248 ~v~~l~s~~~~--~~tG~~~~vdgG 270 (276)
T 1mxh_A 248 AIAFLVSKDAG--YITGTTLKVDGG 270 (276)
T ss_dssp HHHHHHSGGGT--TCCSCEEEESTT
T ss_pred HHHHHhCcccc--CccCcEEEECCc
Confidence 99988865331 135789998876
No 138
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=99.76 E-value=2.9e-17 Score=167.11 Aligned_cols=234 Identities=14% Similarity=0.108 Sum_probs=157.4
Q ss_pred ccCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCc-------CHHHHHHHHHhChhhHHhhhhccccccCe
Q psy6053 99 TFTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGK-------NARQRIEELFASPLFNLLKSVHGQKIIDK 171 (614)
Q Consensus 99 ~~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~-------~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~ 171 (614)
.+++|+++||||+|+||++++++|++.|.+ |+++.|..... ...+++++..+ .+. . ...+
T Consensus 12 ~l~gk~~lVTGas~gIG~a~a~~la~~G~~---V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-----~~~----~-~~~~ 78 (280)
T 3pgx_A 12 SLQGRVAFITGAARGQGRSHAVRLAAEGAD---IIACDICAPVSASVTYAPASPEDLDETAR-----LVE----D-QGRK 78 (280)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCE---EEEEECCSCCCTTCCSCCCCHHHHHHHHH-----HHH----T-TTCC
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEeccccccccccccccCHHHHHHHHH-----HHH----h-cCCe
Confidence 467899999999999999999999999876 88888843210 01233333211 111 1 3357
Q ss_pred EEEEeCCCCCCCCCCCHHHHHHHhc-------cccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHHc--
Q psy6053 172 VLPISGDAEADELAIKESDRQLLAS-------EVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKEM-- 235 (614)
Q Consensus 172 v~~v~gDl~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~-- 235 (614)
+.++.+|+++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++.+...
T Consensus 79 ~~~~~~Dv~~~~------~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~ 152 (280)
T 3pgx_A 79 ALTRVLDVRDDA------ALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMI 152 (280)
T ss_dssp EEEEECCTTCHH------HHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred EEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHH
Confidence 899999999876 6666654 68999999997542 3567788999999999999887441
Q ss_pred --CCCceEEEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh
Q psy6053 236 --KHLELFVHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN 313 (614)
Q Consensus 236 --~~~k~~V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~ 313 (614)
+.-.++|++||..+..... ....|+.||+..+.+.+..+.
T Consensus 153 ~~~~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~~~~~la~ 194 (280)
T 3pgx_A 153 EAGNGGSIVVVSSSAGLKATP--------------------------------------GNGHYSASKHGLTALTNTLAI 194 (280)
T ss_dssp HHCSCEEEEEECCGGGTSCCT--------------------------------------TBHHHHHHHHHHHHHHHHHHH
T ss_pred hcCCCCEEEEEcchhhccCCC--------------------------------------CchhHHHHHHHHHHHHHHHHH
Confidence 2246899999986543210 015799999999988877654
Q ss_pred ----CCCCEEEeecceeecccCCCCccccCCCCchHHHHHHHhcC--ceeeEeeCCCccccceeHHHHHHHHHHHHHhhh
Q psy6053 314 ----NGMPCLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKG--VIRTMFCDNTGYADFLPVDITINGIFVAIWAYL 387 (614)
Q Consensus 314 ----~glp~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g--~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~ 387 (614)
+|+++..++||.|.++... ........... ....+.........+..++|+|++++.++....
T Consensus 195 e~~~~gi~vn~v~PG~v~t~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p~dvA~~v~~L~s~~~ 263 (280)
T 3pgx_A 195 ELGEYGIRVNSIHPYSVETPMIE-----------PEAMMEIFARHPSFVHSFPPMPVQPNGFMTADEVADVVAWLAGDGS 263 (280)
T ss_dssp HHGGGTEEEEEEEECSBCSTTCC-----------HHHHHHHHHHCGGGGGGSCCBTTBCSSCBCHHHHHHHHHHHHSGGG
T ss_pred HhhhcCeEEEEEeeCcccCcccc-----------hhhhhhhhhcCchhhhhhhhcccCCCCCCCHHHHHHHHHHHhCccc
Confidence 5899999999999776432 11111111000 000000011111248899999999998886543
Q ss_pred hcCCCCccEEEeccC
Q psy6053 388 SQKEHRQSIVHLTSS 402 (614)
Q Consensus 388 ~~~~~~~~vyni~~~ 402 (614)
. -..++++++.++
T Consensus 264 ~--~itG~~i~vdGG 276 (280)
T 3pgx_A 264 G--TLTGTQIPVDKG 276 (280)
T ss_dssp T--TCSSCEEEESTT
T ss_pred c--CCCCCEEEECCC
Confidence 2 136889999877
No 139
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=99.76 E-value=1.4e-17 Score=169.21 Aligned_cols=241 Identities=14% Similarity=0.108 Sum_probs=160.2
Q ss_pred cccCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCc------CHHHHHHHHHhChhhHHhhhhccccccCe
Q psy6053 98 ETFTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGK------NARQRIEELFASPLFNLLKSVHGQKIIDK 171 (614)
Q Consensus 98 ~~~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~------~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~ 171 (614)
..+++|+||||||+|+||++++++|++.|.+ |+++.|..... ...+++++..+ .+. . ...+
T Consensus 9 ~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~---V~~~~r~~~~~~~~~~~~~~~~~~~~~~-----~~~----~-~~~~ 75 (278)
T 3sx2_A 9 GPLTGKVAFITGAARGQGRAHAVRLAADGAD---IIAVDLCDQIASVPYPLATPEELAATVK-----LVE----D-IGSR 75 (278)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCE---EEEEECCSCCTTCSSCCCCHHHHHHHHH-----HHH----H-HTCC
T ss_pred CCCCCCEEEEECCCChHHHHHHHHHHHCCCe---EEEEecccccccccccccchHHHHHHHH-----HHH----h-cCCe
Confidence 3467899999999999999999999999876 88888873211 01233333211 111 1 2357
Q ss_pred EEEEeCCCCCCCCCCCHHHHHHHhc-------cccEEEEcccccCh---hHHHHHHHHHhHHHHHHHHHHHHHc----CC
Q psy6053 172 VLPISGDAEADELAIKESDRQLLAS-------EVDIMIHGAATIRF---DEALKKAVLLNTRGTKMMLSLAKEM----KH 237 (614)
Q Consensus 172 v~~v~gDl~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~---~~~~~~~~~~Nv~gt~~ll~la~~~----~~ 237 (614)
+.++.+|+++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++++... +.
T Consensus 76 ~~~~~~D~~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~ 149 (278)
T 3sx2_A 76 IVARQADVRDRE------SLSAALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGT 149 (278)
T ss_dssp EEEEECCTTCHH------HHHHHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCS
T ss_pred EEEEeCCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC
Confidence 999999999876 6776665 78999999997542 4667889999999999999987542 22
Q ss_pred CceEEEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----
Q psy6053 238 LELFVHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN---- 313 (614)
Q Consensus 238 ~k~~V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~---- 313 (614)
-.++|++||..+...... +. +. ...|+.||+..+.+.+..+.
T Consensus 150 ~g~iv~isS~~~~~~~~~--------~~-~~-------------------------~~~Y~asKaa~~~~~~~la~e~~~ 195 (278)
T 3sx2_A 150 GGSIVLISSSAGLAGVGS--------AD-PG-------------------------SVGYVAAKHGVVGLMRVYANLLAG 195 (278)
T ss_dssp CEEEEEECCGGGTSCCCC--------SS-HH-------------------------HHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred CcEEEEEccHHhcCCCcc--------CC-CC-------------------------chHhHHHHHHHHHHHHHHHHHHhc
Confidence 468999999865432110 00 00 14799999999988877654
Q ss_pred CCCCEEEeecceeecccCCCCccccCCCCchHHHHHHHh-cCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCC
Q psy6053 314 NGMPCLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAG-KGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEH 392 (614)
Q Consensus 314 ~glp~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~-~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~ 392 (614)
+|+++..++||.|.++.... ......+.... ........++... ..+..++|+|++++.++..... -.
T Consensus 196 ~gi~vn~v~PG~v~T~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~p~dvA~~v~~l~s~~~~--~i 264 (278)
T 3sx2_A 196 QMIRVNSIHPSGVETPMINN--------EFTREWLAKMAAATDTPGAMGNAMP-VEVLAPEDVANAVAWLVSDQAR--YI 264 (278)
T ss_dssp GTEEEEEEEESCBSSTTTSS--------HHHHHHHHHHHHHCC--CTTSCSSS-CSSBCHHHHHHHHHHHTSGGGT--TC
T ss_pred cCcEEEEEecCCccCccchh--------hhHHHHHhhccchhhhhhhhhhhcC-cCcCCHHHHHHHHHHHhCcccc--cc
Confidence 58999999999997764321 00111111111 1100001112222 5678999999999988865432 13
Q ss_pred CccEEEeccC
Q psy6053 393 RQSIVHLTSS 402 (614)
Q Consensus 393 ~~~vyni~~~ 402 (614)
.++++++.++
T Consensus 265 tG~~i~vdGG 274 (278)
T 3sx2_A 265 TGVTLPVDAG 274 (278)
T ss_dssp CSCEEEESTT
T ss_pred cCCEEeECCC
Confidence 6889999877
No 140
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=99.76 E-value=1.3e-17 Score=167.48 Aligned_cols=215 Identities=15% Similarity=0.143 Sum_probs=148.5
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
+++|+++||||+|+||++++++|++.|.+ |+++.|+..... +-.++ ...++.++.+|+
T Consensus 5 l~~k~~lVTGas~gIG~aia~~l~~~G~~---V~~~~r~~~~~~--~~~~~-----------------~~~~~~~~~~Dv 62 (257)
T 3tpc_A 5 LKSRVFIVTGASSGLGAAVTRMLAQEGAT---VLGLDLKPPAGE--EPAAE-----------------LGAAVRFRNADV 62 (257)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCE---EEEEESSCC-------------------------------CEEEECCT
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEeCChHHHH--HHHHH-----------------hCCceEEEEccC
Confidence 56899999999999999999999999876 888898764321 10010 224678999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcccccCh-----------hHHHHHHHHHhHHHHHHHHHHHHHc------
Q psy6053 180 EADELAIKESDRQLLAS-------EVDIMIHGAATIRF-----------DEALKKAVLLNTRGTKMMLSLAKEM------ 235 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~-----------~~~~~~~~~~Nv~gt~~ll~la~~~------ 235 (614)
++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++++...
T Consensus 63 ~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~ 136 (257)
T 3tpc_A 63 TNEA------DATAALAFAKQEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEP 136 (257)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCC
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccc
Confidence 9865 6766665 78999999997531 3567788999999999999988763
Q ss_pred ---CCCceEEEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHh
Q psy6053 236 ---KHLELFVHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAM 312 (614)
Q Consensus 236 ---~~~k~~V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~ 312 (614)
++..++|++||..+..... ....|+.||+..+.+.+..+
T Consensus 137 ~~~~~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~~~~~la 178 (257)
T 3tpc_A 137 DADGERGVIVNTASIAAFDGQI--------------------------------------GQAAYAASKGGVAALTLPAA 178 (257)
T ss_dssp CTTSCCEEEEEECCTHHHHCCT--------------------------------------TCHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCeEEEEEechhhccCCC--------------------------------------CCcchHHHHHHHHHHHHHHH
Confidence 1345799999986543210 01579999998888876655
Q ss_pred h----CCCCEEEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCcc-ccceeHHHHHHHHHHHHHhhh
Q psy6053 313 N----NGMPCLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGY-ADFLPVDITINGIFVAIWAYL 387 (614)
Q Consensus 313 ~----~glp~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~-~d~vpVDdva~aii~~~~~~~ 387 (614)
. +|+++..++||.|.++.....+. ........ .... ..+...+|+|++++.++....
T Consensus 179 ~e~~~~gi~vn~v~PG~v~t~~~~~~~~---------~~~~~~~~---------~~p~~~r~~~~~dva~~v~~l~s~~~ 240 (257)
T 3tpc_A 179 RELARFGIRVVTIAPGIFDTPMMAGMPQ---------DVQDALAA---------SVPFPPRLGRAEEYAALVKHICENTM 240 (257)
T ss_dssp HHHGGGTEEEEEEEECCBSCC-----------------------C---------CSSSSCSCBCHHHHHHHHHHHHHCTT
T ss_pred HHHHHcCeEEEEEEeCCCCChhhccCCH---------HHHHHHHh---------cCCCCCCCCCHHHHHHHHHHHcccCC
Confidence 4 58999999999997654321110 01001111 1111 346789999999999886533
Q ss_pred hcCCCCccEEEeccC
Q psy6053 388 SQKEHRQSIVHLTSS 402 (614)
Q Consensus 388 ~~~~~~~~vyni~~~ 402 (614)
..++++++.++
T Consensus 241 ----itG~~i~vdGG 251 (257)
T 3tpc_A 241 ----LNGEVIRLDGA 251 (257)
T ss_dssp ----CCSCEEEESTT
T ss_pred ----cCCcEEEECCC
Confidence 37889999877
No 141
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=99.76 E-value=1.1e-17 Score=171.39 Aligned_cols=223 Identities=13% Similarity=0.114 Sum_probs=156.8
Q ss_pred ccCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCC
Q psy6053 99 TFTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGD 178 (614)
Q Consensus 99 ~~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gD 178 (614)
.++||+||||||+|+||++++++|++.|.+ |+++.|.... ..+.+.+..+. ...++.++.+|
T Consensus 44 ~l~gk~vlVTGas~GIG~aia~~la~~G~~---V~~~~r~~~~--~~~~~~~~~~~-------------~~~~~~~~~~D 105 (291)
T 3ijr_A 44 KLKGKNVLITGGDSGIGRAVSIAFAKEGAN---IAIAYLDEEG--DANETKQYVEK-------------EGVKCVLLPGD 105 (291)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESSCHH--HHHHHHHHHHT-------------TTCCEEEEESC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEeCCchH--HHHHHHHHHHh-------------cCCcEEEEECC
Confidence 367899999999999999999999999876 8888887532 12222222111 33578999999
Q ss_pred CCCCCCCCCHHHHHHHhc-------cccEEEEcccccC--------hhHHHHHHHHHhHHHHHHHHHHHHHc-CCCceEE
Q psy6053 179 AEADELAIKESDRQLLAS-------EVDIMIHGAATIR--------FDEALKKAVLLNTRGTKMMLSLAKEM-KHLELFV 242 (614)
Q Consensus 179 l~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~--------~~~~~~~~~~~Nv~gt~~ll~la~~~-~~~k~~V 242 (614)
+++++ +++.+++ ++|++||+||... -.+.++..+++|+.|+.++++.+... .+..++|
T Consensus 106 v~d~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv 179 (291)
T 3ijr_A 106 LSDEQ------HCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVII 179 (291)
T ss_dssp TTSHH------HHHHHHHHHHHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEE
T ss_pred CCCHH------HHHHHHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEE
Confidence 99866 6666654 6899999999642 13567789999999999999999863 2345899
Q ss_pred EEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCCE
Q psy6053 243 HISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMPC 318 (614)
Q Consensus 243 ~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp~ 318 (614)
++||..+..... ....|+.||+..|.+.+..+. +|+++
T Consensus 180 ~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gi~v 221 (291)
T 3ijr_A 180 NTASIVAYEGNE--------------------------------------TLIDYSATKGAIVAFTRSLSQSLVQKGIRV 221 (291)
T ss_dssp EECCTHHHHCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEE
T ss_pred EEechHhcCCCC--------------------------------------CChhHHHHHHHHHHHHHHHHHHHhhcCEEE
Confidence 999986543211 015799999999988877654 58999
Q ss_pred EEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEE
Q psy6053 319 LMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVH 398 (614)
Q Consensus 319 ~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyn 398 (614)
..++||.|.++.... . .. ........ .......+..++|+|++++.++..... -..+++++
T Consensus 222 n~v~PG~v~T~~~~~------~-~~-~~~~~~~~---------~~~p~~r~~~p~dvA~~v~~L~s~~~~--~itG~~i~ 282 (291)
T 3ijr_A 222 NGVAPGPIWTPLIPS------S-FD-EKKVSQFG---------SNVPMQRPGQPYELAPAYVYLASSDSS--YVTGQMIH 282 (291)
T ss_dssp EEEEECSBCSTHHHH------H-SC-HHHHHHTT---------TTSTTSSCBCGGGTHHHHHHHHSGGGT--TCCSCEEE
T ss_pred EEEeeCCCcCCcccc------c-CC-HHHHHHHH---------ccCCCCCCcCHHHHHHHHHHHhCCccC--CCcCCEEE
Confidence 999999987653100 0 00 01111111 122233467899999999988865432 13688999
Q ss_pred eccC
Q psy6053 399 LTSS 402 (614)
Q Consensus 399 i~~~ 402 (614)
+.++
T Consensus 283 vdGG 286 (291)
T 3ijr_A 283 VNGG 286 (291)
T ss_dssp ESSS
T ss_pred ECCC
Confidence 9877
No 142
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=99.76 E-value=6.7e-18 Score=175.50 Aligned_cols=244 Identities=11% Similarity=0.099 Sum_probs=165.3
Q ss_pred ccCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccC-------CCcCHHHHHHHHHhChhhHHhhhhccccccCe
Q psy6053 99 TFTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQK-------KGKNARQRIEELFASPLFNLLKSVHGQKIIDK 171 (614)
Q Consensus 99 ~~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~-------~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~ 171 (614)
.+++|+||||||+|+||++++++|++.|.+ |+++.|.. +.....+.+.+.+ . . ...+
T Consensus 24 ~l~gk~vlVTGas~GIG~aia~~la~~G~~---Vv~~~r~~~~~~~~~~~~~~~~~~~~~~--------~----~-~~~~ 87 (322)
T 3qlj_A 24 VVDGRVVIVTGAGGGIGRAHALAFAAEGAR---VVVNDIGVGLDGSPASGGSAAQSVVDEI--------T----A-AGGE 87 (322)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCE---EEEECCCBCTTSSBTCTTSHHHHHHHHH--------H----H-TTCE
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEeCcccccccccccHHHHHHHHHHH--------H----h-cCCc
Confidence 367899999999999999999999999876 88888761 1122222222111 1 1 3357
Q ss_pred EEEEeCCCCCCCCCCCHHHHHHHhc-------cccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHHc-C
Q psy6053 172 VLPISGDAEADELAIKESDRQLLAS-------EVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKEM-K 236 (614)
Q Consensus 172 v~~v~gDl~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~-~ 236 (614)
+.++.+|+++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++++... .
T Consensus 88 ~~~~~~Dv~d~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~ 161 (322)
T 3qlj_A 88 AVADGSNVADWD------QAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWR 161 (322)
T ss_dssp EEEECCCTTSHH------HHHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 899999999976 6666665 78999999997532 3567788999999999999987542 0
Q ss_pred C--------CceEEEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHH
Q psy6053 237 H--------LELFVHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLV 308 (614)
Q Consensus 237 ~--------~k~~V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv 308 (614)
. -.++|++||..+..... ....|+.||+..+.+.
T Consensus 162 ~~~~~~~~~~g~IV~isS~~~~~~~~--------------------------------------~~~~Y~asKaal~~l~ 203 (322)
T 3qlj_A 162 GLSKAGKAVDGRIINTSSGAGLQGSV--------------------------------------GQGNYSAAKAGIATLT 203 (322)
T ss_dssp HHHHTTCCCCEEEEEECCHHHHHCBT--------------------------------------TCHHHHHHHHHHHHHH
T ss_pred HccccCCCCCcEEEEEcCHHHccCCC--------------------------------------CCccHHHHHHHHHHHH
Confidence 0 14899999986532210 0157999999999888
Q ss_pred HHHhh----CCCCEEEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHH
Q psy6053 309 VEAMN----NGMPCLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIW 384 (614)
Q Consensus 309 ~~~~~----~glp~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~ 384 (614)
+..+. .|+++..++|| +..+.... +.... .........++.++|+|++++.++.
T Consensus 204 ~~la~e~~~~gI~vn~v~PG-~~t~~~~~---~~~~~------------------~~~~~~~~~~~~pedva~~v~~L~s 261 (322)
T 3qlj_A 204 LVGAAEMGRYGVTVNAIAPS-ARTRMTET---VFAEM------------------MATQDQDFDAMAPENVSPLVVWLGS 261 (322)
T ss_dssp HHHHHHHGGGTEEEEEEEEC-TTSCCSCC---SCCC--------------------------CCTTCGGGTHHHHHHHTS
T ss_pred HHHHHHhcccCcEEEEecCC-CCCccchh---hhhhh------------------hhccccccCCCCHHHHHHHHHHHhC
Confidence 76654 58999999999 53322111 00000 0011222345688999999998885
Q ss_pred hhhhcCCCCccEEEeccCCcc---------------cccHHHHHHHHhhhcccccCC
Q psy6053 385 AYLSQKEHRQSIVHLTSSQEW---------------QVSWQEIIDIGKSIVTTEVPL 426 (614)
Q Consensus 385 ~~~~~~~~~~~vyni~~~~~~---------------~it~~e~~~~~~~~~g~~~p~ 426 (614)
.... -..+.++++.++... .++..|+.+.+.+.+|.+.|.
T Consensus 262 ~~~~--~itG~~i~vdGG~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~~~ 316 (322)
T 3qlj_A 262 AEAR--DVTGKVFEVEGGKIRVAEGWAHGPQIDKGARWDPAELGPVVADLLGKARPP 316 (322)
T ss_dssp GGGG--GCCSCEEEEETTEEEEEECCEEEEEEECSSCCCGGGHHHHHHHHHHHSCCC
T ss_pred cccc--CCCCCEEEECCCccccCCCcccccccCccCCCCHHHHHHHHHHHhhccCCC
Confidence 5432 136788888877211 236699999999988876553
No 143
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=99.76 E-value=2.3e-17 Score=168.91 Aligned_cols=226 Identities=16% Similarity=0.116 Sum_probs=151.7
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
++||+|+||||||+||++++++|++.|.+ |+++.|+. +++++..+. ...++.++.+|+
T Consensus 14 l~gk~vlVTGas~gIG~~~a~~L~~~G~~---V~~~~r~~------~~~~~~~~~-------------~~~~~~~~~~Dl 71 (291)
T 3rd5_A 14 FAQRTVVITGANSGLGAVTARELARRGAT---VIMAVRDT------RKGEAAART-------------MAGQVEVRELDL 71 (291)
T ss_dssp CTTCEEEEECCSSHHHHHHHHHHHHTTCE---EEEEESCH------HHHHHHHTT-------------SSSEEEEEECCT
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCE---EEEEECCH------HHHHHHHHH-------------hcCCeeEEEcCC
Confidence 57899999999999999999999999865 88999864 233332211 335799999999
Q ss_pred CCCCCCCCHHHHHHHhc---cccEEEEcccccCh-----hHHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEeCceecc
Q psy6053 180 EADELAIKESDRQLLAS---EVDIMIHGAATIRF-----DEALKKAVLLNTRGTKMMLSLAKEMKHLELFVHISTAYCHL 251 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~---~vd~ViH~AA~v~~-----~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vST~~~~~ 251 (614)
++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++++... ..+++|++||..+..
T Consensus 72 ~d~~------~v~~~~~~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~-~~~riv~isS~~~~~ 144 (291)
T 3rd5_A 72 QDLS------SVRRFADGVSGADVLINNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPR-LTDRVVTVSSMAHWP 144 (291)
T ss_dssp TCHH------HHHHHHHTCCCEEEEEECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGG-EEEEEEEECCGGGTT
T ss_pred CCHH------HHHHHHHhcCCCCEEEECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHH-HHhheeEeechhhcc
Confidence 9876 7888877 57999999997532 2456678999999999999999884 567999999987654
Q ss_pred CCcccccccCC-CCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CC--CCEEEeecc
Q psy6053 252 QEKVLYEKPYP-PPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NG--MPCLMLRPS 324 (614)
Q Consensus 252 ~~~~i~E~~~~-~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~g--lp~~IvRp~ 324 (614)
.....++.... .+..+ ...|+.||+..+.+.+..+. .| +.+..++||
T Consensus 145 ~~~~~~~~~~~~~~~~~--------------------------~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG 198 (291)
T 3rd5_A 145 GRINLEDLNWRSRRYSP--------------------------WLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPG 198 (291)
T ss_dssp CCCCSSCTTCSSSCCCH--------------------------HHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCS
T ss_pred CCCCcccccccccCCCC--------------------------cchHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCC
Confidence 32211110000 01110 14799999999988877654 45 999999999
Q ss_pred eeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEeccC
Q psy6053 325 IIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLTSS 402 (614)
Q Consensus 325 ~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~~~ 402 (614)
.|..+.....+ ......... .....-..+.+++|++++.++..+. ..++.+++.++
T Consensus 199 ~v~T~~~~~~~---------~~~~~~~~~---------~~~~~~~~~~~~~A~~~~~l~~~~~----~~G~~~~vdgG 254 (291)
T 3rd5_A 199 YSHTNLQGASG---------RKLGDALMS---------AATRVVATDADFGARQTLYAASQDL----PGDSFVGPRFG 254 (291)
T ss_dssp GGGSCC--------------------------------------CHHHHHHHHHHHHHHHSCC----CTTCEEEETTS
T ss_pred CCccccccccc---------hHHHHHHHH---------HHHHHHhCCHHHHHHHHHHHHcCCC----CCCceeCCccc
Confidence 98554322110 000000000 0111223468999999999988743 36777777543
No 144
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=99.75 E-value=3.4e-17 Score=164.25 Aligned_cols=216 Identities=17% Similarity=0.104 Sum_probs=149.4
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
+++|+|+||||||+||++++++|++.|++ |+++.|.. +++++..+. ...++.++.+|+
T Consensus 3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~---V~~~~r~~------~~~~~~~~~-------------~~~~~~~~~~D~ 60 (254)
T 1hdc_A 3 LSGKTVIITGGARGLGAEAARQAVAAGAR---VVLADVLD------EEGAATARE-------------LGDAARYQHLDV 60 (254)
T ss_dssp CCCSEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCH------HHHHHHHHT-------------TGGGEEEEECCT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEeCCH------HHHHHHHHH-------------hCCceeEEEecC
Confidence 56899999999999999999999999876 88888863 233332211 123688899999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHH----HHHHHcCCCceE
Q psy6053 180 EADELAIKESDRQLLAS-------EVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMML----SLAKEMKHLELF 241 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll----~la~~~~~~k~~ 241 (614)
++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+..+. ..+++ .+..++
T Consensus 61 ~~~~------~~~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~-~~~g~i 133 (254)
T 1hdc_A 61 TIEE------DWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKD-AGGGSI 133 (254)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-HTCEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH-cCCCEE
Confidence 9865 6766665 79999999996532 3567788999999998554 44444 256899
Q ss_pred EEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCC
Q psy6053 242 VHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMP 317 (614)
Q Consensus 242 V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp 317 (614)
|++||..+..... ....|+.||+..|.+.+..+. .|++
T Consensus 134 v~isS~~~~~~~~--------------------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~ 175 (254)
T 1hdc_A 134 VNISSAAGLMGLA--------------------------------------LTSSYGASKWGVRGLSKLAAVELGTDRIR 175 (254)
T ss_dssp EEECCGGGTSCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred EEECchhhccCCC--------------------------------------CchhHHHHHHHHHHHHHHHHHHhhhcCeE
Confidence 9999987643210 015799999999988877654 5899
Q ss_pred EEEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccce-eHHHHHHHHHHHHHhhhhcCCCCccE
Q psy6053 318 CLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFL-PVDITINGIFVAIWAYLSQKEHRQSI 396 (614)
Q Consensus 318 ~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~v-pVDdva~aii~~~~~~~~~~~~~~~v 396 (614)
++++|||.|.++.... ........+ ........+. +.+|+|++++.++..... ...+++
T Consensus 176 v~~v~Pg~v~t~~~~~-----------------~~~~~~~~~-~~~~p~~~~~~~~~dvA~~v~~l~s~~~~--~~tG~~ 235 (254)
T 1hdc_A 176 VNSVHPGMTYTPMTAE-----------------TGIRQGEGN-YPNTPMGRVGNEPGEIAGAVVKLLSDTSS--YVTGAE 235 (254)
T ss_dssp EEEEEECSBCCHHHHH-----------------HTCCCSTTS-CTTSTTSSCB-CHHHHHHHHHHHHSGGGT--TCCSCE
T ss_pred EEEEecccCcCccccc-----------------cchhHHHHH-HhcCCCCCCCCCHHHHHHHHHHHhCchhc--CCCCCE
Confidence 9999999987653110 000000000 0000112356 899999999988865431 136788
Q ss_pred EEeccC
Q psy6053 397 VHLTSS 402 (614)
Q Consensus 397 yni~~~ 402 (614)
+++.++
T Consensus 236 ~~vdgG 241 (254)
T 1hdc_A 236 LAVDGG 241 (254)
T ss_dssp EEESTT
T ss_pred EEECCC
Confidence 988877
No 145
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=99.75 E-value=5.5e-18 Score=171.10 Aligned_cols=226 Identities=13% Similarity=0.039 Sum_probs=146.0
Q ss_pred CCcEEEEecccccccHHHHHHHHh-hCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 101 TGKTLFMTGASGFLGKVLLEKILR-KSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 101 ~~~~VLITGaTGFlG~~Ll~~Ll~-~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
++|+|+||||||+||++++++|++ .|++ |+++.|... ++++..+ .+.. ...++.++.+|+
T Consensus 3 ~~k~vlITGasggIG~~~a~~L~~~~g~~---V~~~~r~~~------~~~~~~~-----~l~~-----~~~~~~~~~~Dl 63 (276)
T 1wma_A 3 GIHVALVTGGNKGIGLAIVRDLCRLFSGD---VVLTARDVT------RGQAAVQ-----QLQA-----EGLSPRFHQLDI 63 (276)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHHSSSE---EEEEESSHH------HHHHHHH-----HHHH-----TTCCCEEEECCT
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHhcCCe---EEEEeCChH------HHHHHHH-----HHHh-----cCCeeEEEECCC
Confidence 578999999999999999999999 8865 888998632 2221111 1111 224688999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHHc-CCCceEEEE
Q psy6053 180 EADELAIKESDRQLLAS-------EVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKEM-KHLELFVHI 244 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~-~~~k~~V~v 244 (614)
++++ +++.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++... .+..++|++
T Consensus 64 ~~~~------~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~ 137 (276)
T 1wma_A 64 DDLQ------SIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNV 137 (276)
T ss_dssp TCHH------HHHHHHHHHHHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred CCHH------HHHHHHHHHHHhcCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEE
Confidence 9865 6666665 79999999996531 4667788999999999999999873 112489999
Q ss_pred eCceeccCC----cccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCC-CchhhhHHHHHHHHHHHhh------
Q psy6053 245 STAYCHLQE----KVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFP-NSYAYTKCLSEGLVVEAMN------ 313 (614)
Q Consensus 245 ST~~~~~~~----~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~p-n~Y~~SK~~aE~lv~~~~~------ 313 (614)
||..+.... ....+.....+.+.+++........++......+. ..+| +.|+.||+..|.+++..+.
T Consensus 138 sS~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~--~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~ 215 (276)
T 1wma_A 138 SSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKGVHQK--EGWPSSAYGVTKIGVTVLSRIHARKLSEQR 215 (276)
T ss_dssp CCHHHHHHHHTSCHHHHHHHHCSSCCHHHHHHHHHHHHHHHHTTCTTT--TTCCSCHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CChhhhcccccCChhHHhhccccccchhhhhhhhhhhhhhhccccccc--CCCccchhHHHHHHHHHHHHHHHHHhhccc
Confidence 998654210 00011111112222222222111111111110110 1122 6899999999888876543
Q ss_pred --CCCCEEEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhh
Q psy6053 314 --NGMPCLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAY 386 (614)
Q Consensus 314 --~glp~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~ 386 (614)
.|+++++++||.|.++... + ..+...+++|++++.++..+
T Consensus 216 ~~~~i~v~~v~PG~v~t~~~~---------------------~------------~~~~~~~~~a~~~~~l~~~~ 257 (276)
T 1wma_A 216 KGDKILLNACCPGWVRTDMAG---------------------P------------KATKSPEEGAETPVYLALLP 257 (276)
T ss_dssp TTSCCEEEEEECCSBCSTTTC---------------------T------------TCSBCHHHHTHHHHHHHSCC
T ss_pred CCCceEEEEecCCccccCcCC---------------------c------------cccCChhHhhhhHhhhhcCc
Confidence 3899999999988554210 0 13578999999999988644
No 146
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=99.75 E-value=7.5e-18 Score=167.67 Aligned_cols=208 Identities=11% Similarity=0.140 Sum_probs=140.6
Q ss_pred CCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCC
Q psy6053 101 TGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAE 180 (614)
Q Consensus 101 ~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~ 180 (614)
++|+|+||||+|+||++++++|++.|.. .+|+++.|+.... +.+.+. ...++.++.+|++
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~g~~-~~V~~~~r~~~~~---~~l~~~----------------~~~~~~~~~~D~~ 61 (250)
T 1yo6_A 2 SPGSVVVTGANRGIGLGLVQQLVKDKNI-RHIIATARDVEKA---TELKSI----------------KDSRVHVLPLTVT 61 (250)
T ss_dssp CCSEEEESSCSSHHHHHHHHHHHTCTTC-CEEEEEESSGGGC---HHHHTC----------------CCTTEEEEECCTT
T ss_pred CCCEEEEecCCchHHHHHHHHHHhcCCC-cEEEEEecCHHHH---HHHHhc----------------cCCceEEEEeecC
Confidence 5789999999999999999999999821 2489999975332 112110 1247899999999
Q ss_pred CCCCCCCHHHHHHHhc---------cccEEEEcccccC--------hhHHHHHHHHHhHHHHHHHHHHHHHc---C----
Q psy6053 181 ADELAIKESDRQLLAS---------EVDIMIHGAATIR--------FDEALKKAVLLNTRGTKMMLSLAKEM---K---- 236 (614)
Q Consensus 181 ~~~lGLs~~~~~~l~~---------~vd~ViH~AA~v~--------~~~~~~~~~~~Nv~gt~~ll~la~~~---~---- 236 (614)
+++ +++.+++ ++|+|||+||... ..+.++..+++|+.|+.++++++... .
T Consensus 62 ~~~------~~~~~~~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~ 135 (250)
T 1yo6_A 62 CDK------SLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKE 135 (250)
T ss_dssp CHH------HHHHHHHHHHHHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSS
T ss_pred CHH------HHHHHHHHHHHhcCCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhccccc
Confidence 865 6666665 7999999999754 13557788999999999999887652 1
Q ss_pred --C-----CceEEEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHH
Q psy6053 237 --H-----LELFVHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVV 309 (614)
Q Consensus 237 --~-----~k~~V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~ 309 (614)
+ ..++|++||..+...... +..++.+ ...|+.||+..|.+++
T Consensus 136 ~~~~~~~~~~~iv~isS~~~~~~~~~--~~~~~~~-----------------------------~~~Y~~sK~a~~~~~~ 184 (250)
T 1yo6_A 136 SGDQLSVSRAAVITISSGLGSITDNT--SGSAQFP-----------------------------VLAYRMSKAAINMFGR 184 (250)
T ss_dssp CSSCCCTTTCEEEEECCGGGCSTTCC--STTSSSC-----------------------------BHHHHHHHHHHHHHHH
T ss_pred CCCcccCCCcEEEEeccCccccCCcc--cccccCC-----------------------------ccHHHHHHHHHHHHHH
Confidence 2 578999999865432210 1001011 1579999999999988
Q ss_pred HHhh----CCCCEEEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHh
Q psy6053 310 EAMN----NGMPCLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWA 385 (614)
Q Consensus 310 ~~~~----~glp~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~ 385 (614)
..+. .|+++.++|||.|.++... + ..+++.+++|++++.++..
T Consensus 185 ~la~e~~~~gi~v~~v~Pg~v~t~~~~---------------------~------------~~~~~~~~~a~~~~~~~~~ 231 (250)
T 1yo6_A 185 TLAVDLKDDNVLVVNFCPGWVQTNLGG---------------------K------------NAALTVEQSTAELISSFNK 231 (250)
T ss_dssp HHHHHTGGGTCEEEEEECCCC----------------------------------------------HHHHHHHHHHHTT
T ss_pred HHHHHhccCCeEEEEEcCCceecCCCC---------------------C------------CCCCCHHHHHHHHHHHHhc
Confidence 7665 4899999999988554210 0 1357889999999998865
Q ss_pred hhhcCCCCccEEEec
Q psy6053 386 YLSQKEHRQSIVHLT 400 (614)
Q Consensus 386 ~~~~~~~~~~vyni~ 400 (614)
... ...+..+.+.
T Consensus 232 ~~~--~~~G~~~~~~ 244 (250)
T 1yo6_A 232 LDN--SHNGRFFMRN 244 (250)
T ss_dssp CCG--GGTTCEEETT
T ss_pred ccc--cCCCeEEEEC
Confidence 432 1134555543
No 147
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=99.75 E-value=3.9e-18 Score=171.63 Aligned_cols=226 Identities=14% Similarity=0.100 Sum_probs=154.6
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
+++|+|+||||||+||++++++|++.|++ |+++.|... ++++..+ .++. ...++.++.+|+
T Consensus 12 l~~k~vlVTGas~gIG~~ia~~l~~~G~~---V~~~~r~~~------~~~~~~~-----~l~~-----~~~~~~~~~~D~ 72 (260)
T 2zat_A 12 LENKVALVTASTDGIGLAIARRLAQDGAH---VVVSSRKQE------NVDRTVA-----TLQG-----EGLSVTGTVCHV 72 (260)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTCE---EEEEESCHH------HHHHHHH-----HHHH-----TTCCEEEEECCT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEeCCHH------HHHHHHH-----HHHh-----cCCceEEEEccC
Confidence 57899999999999999999999999875 888888642 2222111 1111 224688999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcccccC----h----hHHHHHHHHHhHHHHHHHHHHHHHc---CCCceE
Q psy6053 180 EADELAIKESDRQLLAS-------EVDIMIHGAATIR----F----DEALKKAVLLNTRGTKMMLSLAKEM---KHLELF 241 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~----~----~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~ 241 (614)
++++ +++.+++ ++|++||+||... + .+.++..+++|+.|+.++++.+... .+..++
T Consensus 73 ~~~~------~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~i 146 (260)
T 2zat_A 73 GKAE------DRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSV 146 (260)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEE
Confidence 9865 6666654 7999999999642 1 3457788999999999988887531 356899
Q ss_pred EEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCC
Q psy6053 242 VHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMP 317 (614)
Q Consensus 242 V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp 317 (614)
|++||..+..... ....|+.||+..|.+.+..+. .|++
T Consensus 147 v~isS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~ 188 (260)
T 2zat_A 147 LIVSSVGAYHPFP--------------------------------------NLGPYNVSKTALLGLTKNLAVELAPRNIR 188 (260)
T ss_dssp EEECCGGGTSCCT--------------------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred EEEechhhcCCCC--------------------------------------CchhHHHHHHHHHHHHHHHHHHhcccCeE
Confidence 9999987643210 015799999999998887654 4899
Q ss_pred EEEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEE
Q psy6053 318 CLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIV 397 (614)
Q Consensus 318 ~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vy 397 (614)
+++++||.|.++.... .|. .. ........+ .....+.+++|+|++++.++..... -..++++
T Consensus 189 v~~v~Pg~v~t~~~~~--~~~----~~-~~~~~~~~~---------~~~~~~~~~~dva~~v~~l~s~~~~--~~tG~~~ 250 (260)
T 2zat_A 189 VNCLAPGLIKTNFSQV--LWM----DK-ARKEYMKES---------LRIRRLGNPEDCAGIVSFLCSEDAS--YITGETV 250 (260)
T ss_dssp EEEEEECSBCSSTTHH--HHS----SH-HHHHHHHHH---------HTCSSCBCGGGGHHHHHHHTSGGGT--TCCSCEE
T ss_pred EEEEEECcccCccchh--ccc----Ch-HHHHHHHhc---------CCCCCCCCHHHHHHHHHHHcCcccC--CccCCEE
Confidence 9999999886653210 010 00 000001110 0112478899999999888765431 1257899
Q ss_pred EeccCCccccc
Q psy6053 398 HLTSSQEWQVS 408 (614)
Q Consensus 398 ni~~~~~~~it 408 (614)
++.++ .+.+
T Consensus 251 ~vdgG--~~~s 259 (260)
T 2zat_A 251 VVGGG--TASR 259 (260)
T ss_dssp EESTT--CCCC
T ss_pred EECCC--cccc
Confidence 99988 5443
No 148
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=99.75 E-value=6.7e-18 Score=168.39 Aligned_cols=220 Identities=12% Similarity=0.054 Sum_probs=153.9
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
+++|+|+||||||+||++++++|++.|.+ |+++.|+... .+.+.+. ++. ...++.++.+|+
T Consensus 3 l~~k~vlITGas~gIG~~~a~~l~~~G~~---v~~~~r~~~~---~~~~~~~--------~~~-----~~~~~~~~~~D~ 63 (247)
T 3lyl_A 3 LNEKVALVTGASRGIGFEVAHALASKGAT---VVGTATSQAS---AEKFENS--------MKE-----KGFKARGLVLNI 63 (247)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTCE---EEEEESSHHH---HHHHHHH--------HHH-----TTCCEEEEECCT
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCE---EEEEeCCHHH---HHHHHHH--------HHh-----cCCceEEEEecC
Confidence 46899999999999999999999999876 8888886421 1222211 111 235789999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHHc---CCCceEE
Q psy6053 180 EADELAIKESDRQLLAS-------EVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKEM---KHLELFV 242 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~V 242 (614)
++++ +++.+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+... .+..++|
T Consensus 64 ~~~~------~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv 137 (247)
T 3lyl_A 64 SDIE------SIQNFFAEIKAENLAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRII 137 (247)
T ss_dssp TCHH------HHHHHHHHHHHTTCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEE
Confidence 9876 6666654 47999999997532 3567788999999999999887542 2446899
Q ss_pred EEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCCE
Q psy6053 243 HISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMPC 318 (614)
Q Consensus 243 ~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp~ 318 (614)
++||..+..... ....|+.||+..+.+.+..+. +|+++
T Consensus 138 ~isS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v 179 (247)
T 3lyl_A 138 SIGSVVGSAGNP--------------------------------------GQTNYCAAKAGVIGFSKSLAYEVASRNITV 179 (247)
T ss_dssp EECCTHHHHCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred EEcchhhccCCC--------------------------------------CcHHHHHHHHHHHHHHHHHHHHHHHcCeEE
Confidence 999986532210 015799999977777766544 58999
Q ss_pred EEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEE
Q psy6053 319 LMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVH 398 (614)
Q Consensus 319 ~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyn 398 (614)
..++||.|.++..... .+ ........ ......+.+++|+|++++.++..... ...+++++
T Consensus 180 ~~v~PG~v~t~~~~~~--------~~-~~~~~~~~---------~~~~~~~~~~~dva~~i~~l~s~~~~--~~tG~~i~ 239 (247)
T 3lyl_A 180 NVVAPGFIATDMTDKL--------TD-EQKSFIAT---------KIPSGQIGEPKDIAAAVAFLASEEAK--YITGQTLH 239 (247)
T ss_dssp EEEEECSBCCTTTTTS--------CH-HHHHHHHT---------TSTTCCCBCHHHHHHHHHHHHSGGGT--TCCSCEEE
T ss_pred EEEeeCcEecccchhc--------cH-HHHHHHhh---------cCCCCCCcCHHHHHHHHHHHhCCCcC--CccCCEEE
Confidence 9999999876543221 11 11111111 22234578999999999988865432 13688999
Q ss_pred eccC
Q psy6053 399 LTSS 402 (614)
Q Consensus 399 i~~~ 402 (614)
+.++
T Consensus 240 vdgG 243 (247)
T 3lyl_A 240 VNGG 243 (247)
T ss_dssp ESTT
T ss_pred ECCC
Confidence 9877
No 149
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=99.75 E-value=2.2e-17 Score=166.42 Aligned_cols=221 Identities=15% Similarity=0.125 Sum_probs=155.9
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
+++|+|+||||+|+||++++++|++.|.+ |+++.|+.. ++++..+ .++.. ...++.++.+|+
T Consensus 8 l~~k~vlVTGas~gIG~aia~~l~~~G~~---V~~~~r~~~------~~~~~~~-----~l~~~----~~~~~~~~~~Dv 69 (262)
T 3pk0_A 8 LQGRSVVVTGGTKGIGRGIATVFARAGAN---VAVAGRSTA------DIDACVA-----DLDQL----GSGKVIGVQTDV 69 (262)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCE---EEEEESCHH------HHHHHHH-----HHHTT----SSSCEEEEECCT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEeCCHH------HHHHHHH-----HHHhh----CCCcEEEEEcCC
Confidence 57899999999999999999999999875 888888642 2222111 11110 225789999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcccccC-------hhHHHHHHHHHhHHHHHHHHHHHHHc---CCCceEE
Q psy6053 180 EADELAIKESDRQLLAS-------EVDIMIHGAATIR-------FDEALKKAVLLNTRGTKMMLSLAKEM---KHLELFV 242 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~-------~~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~V 242 (614)
++++ +++.+++ ++|++||+||... -.+.++..+++|+.|+.++++.+... .+..++|
T Consensus 70 ~~~~------~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv 143 (262)
T 3pk0_A 70 SDRA------QCDALAGRAVEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVV 143 (262)
T ss_dssp TSHH------HHHHHHHHHHHHHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEE
T ss_pred CCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEE
Confidence 9976 6666655 7899999999653 13567788999999999998887663 2557999
Q ss_pred EEeCceec-cCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCC
Q psy6053 243 HISTAYCH-LQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMP 317 (614)
Q Consensus 243 ~vST~~~~-~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp 317 (614)
++||..+. ... | ....|+.||+..|.+.+..+. +|++
T Consensus 144 ~isS~~~~~~~~----------~----------------------------~~~~Y~asK~a~~~l~~~la~e~~~~gi~ 185 (262)
T 3pk0_A 144 LTSSITGPITGY----------P----------------------------GWSHYGATKAAQLGFMRTAAIELAPHKIT 185 (262)
T ss_dssp EECCSBTTTBCC----------T----------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCE
T ss_pred EEechhhccCCC----------C----------------------------CChhhHHHHHHHHHHHHHHHHHHHhhCcE
Confidence 99998652 110 0 015799999999998887655 5899
Q ss_pred EEEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEE
Q psy6053 318 CLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIV 397 (614)
Q Consensus 318 ~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vy 397 (614)
+..++||.|.++.... .. ........... ....+...+|+|++++.++..... -..++++
T Consensus 186 vn~v~PG~v~t~~~~~--------~~-~~~~~~~~~~~---------p~~r~~~p~dva~~v~~L~s~~~~--~itG~~i 245 (262)
T 3pk0_A 186 VNAIMPGNIMTEGLLE--------NG-EEYIASMARSI---------PAGALGTPEDIGHLAAFLATKEAG--YITGQAI 245 (262)
T ss_dssp EEEEEECSBCCHHHHT--------TC-HHHHHHHHTTS---------TTSSCBCHHHHHHHHHHHHSGGGT--TCCSCEE
T ss_pred EEEEEeCcCcCccccc--------cC-HHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHhCcccc--CCcCCEE
Confidence 9999999997763211 11 12222222221 112356789999999988865432 2368899
Q ss_pred EeccC
Q psy6053 398 HLTSS 402 (614)
Q Consensus 398 ni~~~ 402 (614)
++.++
T Consensus 246 ~vdGG 250 (262)
T 3pk0_A 246 AVDGG 250 (262)
T ss_dssp EESTT
T ss_pred EECCC
Confidence 99887
No 150
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=99.75 E-value=1e-17 Score=168.80 Aligned_cols=221 Identities=15% Similarity=0.145 Sum_probs=152.6
Q ss_pred CCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCC
Q psy6053 101 TGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAE 180 (614)
Q Consensus 101 ~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~ 180 (614)
.+|+|+||||+|+||++++++|++.|.+ |+++.|.... ..+.+.+... . ...++.++.+|++
T Consensus 6 ~~k~vlVTGas~gIG~~~a~~l~~~G~~---v~~~~~~~~~--~~~~~~~~~~------------~-~~~~~~~~~~Dl~ 67 (264)
T 3i4f_A 6 FVRHALITAGTKGLGKQVTEKLLAKGYS---VTVTYHSDTT--AMETMKETYK------------D-VEERLQFVQADVT 67 (264)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTCE---EEEEESSCHH--HHHHHHHHTG------------G-GGGGEEEEECCTT
T ss_pred ccCEEEEeCCCchhHHHHHHHHHHCCCE---EEEEcCCChH--HHHHHHHHHH------------h-cCCceEEEEecCC
Confidence 4689999999999999999999999876 7787776422 2222332211 1 3357999999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcccc--c---C----hhHHHHHHHHHhHHHHHHHHHHH----HHcCCCce
Q psy6053 181 ADELAIKESDRQLLAS-------EVDIMIHGAAT--I---R----FDEALKKAVLLNTRGTKMMLSLA----KEMKHLEL 240 (614)
Q Consensus 181 ~~~lGLs~~~~~~l~~-------~vd~ViH~AA~--v---~----~~~~~~~~~~~Nv~gt~~ll~la----~~~~~~k~ 240 (614)
+++ +++.+++ ++|+|||+||. . . -.+.++..+++|+.|+.++++.+ ++ .+..+
T Consensus 68 ~~~------~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-~~~g~ 140 (264)
T 3i4f_A 68 KKE------DLHKIVEEAMSHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRK-QNFGR 140 (264)
T ss_dssp SHH------HHHHHHHHHHHHHSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-HTCEE
T ss_pred CHH------HHHHHHHHHHHHhCCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHh-cCCCe
Confidence 976 6666665 78999999993 1 1 13557788999999999999988 44 35678
Q ss_pred EEEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCC
Q psy6053 241 FVHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGM 316 (614)
Q Consensus 241 ~V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~gl 316 (614)
+|++||..+..... .+ ....|+.||+..+.+++..+. .|+
T Consensus 141 iv~iss~~~~~~~~--------~~----------------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi 184 (264)
T 3i4f_A 141 IINYGFQGADSAPG--------WI----------------------------YRSAFAAAKVGLVSLTKTVAYEEAEYGI 184 (264)
T ss_dssp EEEECCTTGGGCCC--------CT----------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTE
T ss_pred EEEEeechhcccCC--------CC----------------------------CCchhHHHHHHHHHHHHHHHHHhhhcCc
Confidence 99999884421110 00 015799999999988876654 589
Q ss_pred CEEEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccE
Q psy6053 317 PCLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSI 396 (614)
Q Consensus 317 p~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~v 396 (614)
++.+++||.|.++..... ......... .......+...+|+|++++.++..... -..+++
T Consensus 185 ~v~~v~PG~v~t~~~~~~---------~~~~~~~~~---------~~~p~~r~~~~~dva~~v~~l~s~~~~--~itG~~ 244 (264)
T 3i4f_A 185 TANMVCPGDIIGEMKEAT---------IQEARQLKE---------HNTPIGRSGTGEDIARTISFLCEDDSD--MITGTI 244 (264)
T ss_dssp EEEEEEECCCCGGGGSCC---------HHHHHHC-----------------CCCCHHHHHHHHHHHHSGGGT--TCCSCE
T ss_pred EEEEEccCCccCccchhc---------cHHHHHHHh---------hcCCCCCCcCHHHHHHHHHHHcCcccC--CCCCcE
Confidence 999999999988754321 111111000 111123467899999999998865432 136889
Q ss_pred EEeccC
Q psy6053 397 VHLTSS 402 (614)
Q Consensus 397 yni~~~ 402 (614)
+++.+|
T Consensus 245 i~vdGG 250 (264)
T 3i4f_A 245 IEVTGA 250 (264)
T ss_dssp EEESCS
T ss_pred EEEcCc
Confidence 999887
No 151
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=99.75 E-value=1.1e-17 Score=169.60 Aligned_cols=221 Identities=13% Similarity=0.129 Sum_probs=153.6
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
+++|+++||||+|+||++++++|++.|.+ |+++.|... ..+..+++. + ...++.++.+|+
T Consensus 29 l~gk~~lVTGas~GIG~aia~~la~~G~~---V~~~~r~~~---~~~~~~~~~-------------~-~~~~~~~~~~Dv 88 (273)
T 3uf0_A 29 LAGRTAVVTGAGSGIGRAIAHGYARAGAH---VLAWGRTDG---VKEVADEIA-------------D-GGGSAEAVVADL 88 (273)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESSTH---HHHHHHHHH-------------T-TTCEEEEEECCT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEcCHHH---HHHHHHHHH-------------h-cCCcEEEEEecC
Confidence 57899999999999999999999999876 777777532 122122221 1 335789999999
Q ss_pred CCCCCCCCHHHHHHHhc------cccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHHc---CCCceEEE
Q psy6053 180 EADELAIKESDRQLLAS------EVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKEM---KHLELFVH 243 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~V~ 243 (614)
++++ +.+.+.+ ++|++||+||.... .+.++..+++|+.|+.++++.+... .+..++|+
T Consensus 89 ~d~~------~v~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~ 162 (273)
T 3uf0_A 89 ADLE------GAANVAEELAATRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVT 162 (273)
T ss_dssp TCHH------HHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred CCHH------HHHHHHHHHHhcCCCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEE
Confidence 9876 5555443 78999999997542 3567788999999999999877431 25578999
Q ss_pred EeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCCEE
Q psy6053 244 ISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMPCL 319 (614)
Q Consensus 244 vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp~~ 319 (614)
+||..+..... ....|+.||+..+.+.+..+. +|+++.
T Consensus 163 isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn 204 (273)
T 3uf0_A 163 IASMLSFQGGR--------------------------------------NVAAYAASKHAVVGLTRALASEWAGRGVGVN 204 (273)
T ss_dssp ECCGGGTSCCS--------------------------------------SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred EcchHhcCCCC--------------------------------------CChhHHHHHHHHHHHHHHHHHHHhhcCcEEE
Confidence 99986642210 015799999999988877654 589999
Q ss_pred EeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEe
Q psy6053 320 MLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHL 399 (614)
Q Consensus 320 IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni 399 (614)
.++||.|.++..... ............+. ....+..++|+|++++.++..... -..++++++
T Consensus 205 ~v~PG~v~T~~~~~~-------~~~~~~~~~~~~~~---------p~~r~~~pedva~~v~~L~s~~a~--~itG~~i~v 266 (273)
T 3uf0_A 205 ALAPGYVVTANTAAL-------RADDERAAEITARI---------PAGRWATPEDMVGPAVFLASDAAS--YVHGQVLAV 266 (273)
T ss_dssp EEEECSBCSGGGHHH-------HTSHHHHHHHHHHS---------TTSSCBCGGGGHHHHHHHHSGGGT--TCCSCEEEE
T ss_pred EEEeCCCcCCchhhc-------ccCHHHHHHHHhcC---------CCCCCCCHHHHHHHHHHHhCchhc--CCcCCEEEE
Confidence 999999977642110 00011111111111 112467889999999998865432 236889999
Q ss_pred ccC
Q psy6053 400 TSS 402 (614)
Q Consensus 400 ~~~ 402 (614)
.+|
T Consensus 267 dGG 269 (273)
T 3uf0_A 267 DGG 269 (273)
T ss_dssp STT
T ss_pred CcC
Confidence 887
No 152
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=99.75 E-value=1.4e-17 Score=168.11 Aligned_cols=221 Identities=15% Similarity=0.117 Sum_probs=153.2
Q ss_pred cCCcEEEEeccc--ccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeC
Q psy6053 100 FTGKTLFMTGAS--GFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISG 177 (614)
Q Consensus 100 ~~~~~VLITGaT--GFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~g 177 (614)
+++|+|+||||+ |+||++++++|++.|++ |+++.|..+ ..+.++++.. +. .+..++.+
T Consensus 7 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~---V~~~~r~~~---~~~~~~~l~~---------~~-----~~~~~~~~ 66 (265)
T 1qsg_A 7 LSGKRILVTGVASKLSIAYGIAQAMHREGAE---LAFTYQNDK---LKGRVEEFAA---------QL-----GSDIVLQC 66 (265)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCE---EEEEESSTT---THHHHHHHHH---------HT-----TCCCEEEC
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHCCCE---EEEEcCcHH---HHHHHHHHHH---------hc-----CCcEEEEc
Confidence 568999999999 99999999999999876 888899762 2233333211 11 22368899
Q ss_pred CCCCCCCCCCHHHHHHHhc-------cccEEEEcccccCh------------hHHHHHHHHHhHHHHHHHHHHHHHc-CC
Q psy6053 178 DAEADELAIKESDRQLLAS-------EVDIMIHGAATIRF------------DEALKKAVLLNTRGTKMMLSLAKEM-KH 237 (614)
Q Consensus 178 Dl~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~------------~~~~~~~~~~Nv~gt~~ll~la~~~-~~ 237 (614)
|+++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++++... .+
T Consensus 67 D~~~~~------~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~ 140 (265)
T 1qsg_A 67 DVAEDA------SIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP 140 (265)
T ss_dssp CTTCHH------HHHHHHHHHHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE
T ss_pred cCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc
Confidence 999865 6666665 68999999996531 2456778999999999999999763 11
Q ss_pred CceEEEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----
Q psy6053 238 LELFVHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN---- 313 (614)
Q Consensus 238 ~k~~V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~---- 313 (614)
-.++|++||..+.... | ....|+.||+..|.+.+..+.
T Consensus 141 ~g~iv~isS~~~~~~~----------~----------------------------~~~~Y~~sK~a~~~~~~~la~e~~~ 182 (265)
T 1qsg_A 141 GSALLTLSYLGAERAI----------P----------------------------NYNVMGLAKASLEANVRYMANAMGP 182 (265)
T ss_dssp EEEEEEEECGGGTSBC----------T----------------------------TTTHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCEEEEEcchhhccCC----------C----------------------------CchHHHHHHHHHHHHHHHHHHHhhh
Confidence 2489999998653211 0 015799999999999887654
Q ss_pred CCCCEEEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCC
Q psy6053 314 NGMPCLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHR 393 (614)
Q Consensus 314 ~glp~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~ 393 (614)
.|+++.+++||.|.++.... .............+. ....+.+++|+|++++.++..... ...
T Consensus 183 ~gi~v~~v~PG~v~t~~~~~-------~~~~~~~~~~~~~~~---------p~~~~~~~~dva~~v~~l~s~~~~--~~t 244 (265)
T 1qsg_A 183 EGVRVNAISAGPIRTLAASG-------IKDFRKMLAHCEAVT---------PIRRTVTIEDVGNSAAFLCSDLSA--GIS 244 (265)
T ss_dssp TTEEEEEEEECCCCCTTGGG-------STTHHHHHHHHHHHS---------TTSSCCCHHHHHHHHHHHTSGGGT--TCC
T ss_pred cCeEEEEEEeCCCccchhhc-------ccccHHHHHHHHhcC---------CCCCCCCHHHHHHHHHHHhCchhc--Ccc
Confidence 48999999999998764321 111112222221111 011357899999999988864331 135
Q ss_pred ccEEEeccC
Q psy6053 394 QSIVHLTSS 402 (614)
Q Consensus 394 ~~vyni~~~ 402 (614)
++++++.++
T Consensus 245 G~~~~vdgG 253 (265)
T 1qsg_A 245 GEVVHVDGG 253 (265)
T ss_dssp SCEEEESTT
T ss_pred CCEEEECCC
Confidence 789999887
No 153
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=99.75 E-value=3.2e-17 Score=163.96 Aligned_cols=218 Identities=13% Similarity=0.116 Sum_probs=144.3
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
+++|+|+||||||+||++++++|++.|++ |+++.|..... . .++.++.+|+
T Consensus 5 l~~k~vlVTGas~giG~~ia~~l~~~G~~---V~~~~r~~~~~-------------------------~-~~~~~~~~D~ 55 (250)
T 2fwm_X 5 FSGKNVWVTGAGKGIGYATALAFVEAGAK---VTGFDQAFTQE-------------------------Q-YPFATEVMDV 55 (250)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCE---EEEEESCCCSS-------------------------C-CSSEEEECCT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEeCchhhh-------------------------c-CCceEEEcCC
Confidence 46899999999999999999999999876 88899875321 1 1277889999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHH----HcCCCceE
Q psy6053 180 EADELAIKESDRQLLAS-------EVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAK----EMKHLELF 241 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~----~~~~~k~~ 241 (614)
++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++++. + .+..++
T Consensus 56 ~d~~------~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~-~~~g~i 128 (250)
T 2fwm_X 56 ADAA------QVAQVCQRLLAETERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRR-QRGGAI 128 (250)
T ss_dssp TCHH------HHHHHHHHHHHHCSCCCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-HTCCEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHh-cCCCEE
Confidence 9865 6777665 68999999997532 35678899999999999999883 3 256799
Q ss_pred EEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCC
Q psy6053 242 VHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMP 317 (614)
Q Consensus 242 V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp 317 (614)
|++||..+.... | ....|+.||+..|.+.+..+. .|++
T Consensus 129 v~isS~~~~~~~----------~----------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~ 170 (250)
T 2fwm_X 129 VTVASDAAHTPR----------I----------------------------GMSAYGASKAALKSLALSVGLELAGSGVR 170 (250)
T ss_dssp EEECCGGGTSCC----------T----------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCE
T ss_pred EEECchhhCCCC----------C----------------------------CCchHHHHHHHHHHHHHHHHHHhCccCCE
Confidence 999998764321 0 015799999999998887654 4899
Q ss_pred EEEeecceeecccCCCCccccCCCCchHHHHH-HHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccE
Q psy6053 318 CLMLRPSIIIPVWREPLPGWTDNINGPTGLLI-GAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSI 396 (614)
Q Consensus 318 ~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~-~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~v 396 (614)
++++|||.|.++...... ....... ... ..... .........+...+|+|++++.++..... ...+++
T Consensus 171 v~~v~Pg~v~t~~~~~~~-------~~~~~~~~~~~-~~~~~-~~~~~p~~~~~~p~dvA~~v~~l~s~~~~--~~tG~~ 239 (250)
T 2fwm_X 171 CNVVSPGSTDTDMQRTLW-------VSDDAEEQRIR-GFGEQ-FKLGIPLGKIARPQEIANTILFLASDLAS--HITLQD 239 (250)
T ss_dssp EEEEEECCC---------------------------------------------CHHHHHHHHHHHHSGGGT--TCCSCE
T ss_pred EEEEECCcccCccccccc-------cChhHHHHHHh-hhhhc-ccccCCCCCCcCHHHHHHHHHHHhCcccc--CCCCCE
Confidence 999999999876432110 0000000 000 00000 00000112367899999999998865432 136788
Q ss_pred EEeccC
Q psy6053 397 VHLTSS 402 (614)
Q Consensus 397 yni~~~ 402 (614)
+++.++
T Consensus 240 i~vdGG 245 (250)
T 2fwm_X 240 IVVDGG 245 (250)
T ss_dssp EEESTT
T ss_pred EEECCC
Confidence 988876
No 154
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=99.75 E-value=2.4e-17 Score=168.16 Aligned_cols=220 Identities=12% Similarity=0.106 Sum_probs=149.7
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
+++|+|+||||||+||++++++|++.|.+ |+++.|+.. +++++.+ .++. ...++.++.+|+
T Consensus 42 l~~k~vlITGasggIG~~la~~L~~~G~~---V~~~~r~~~------~~~~~~~-----~l~~-----~~~~~~~~~~Dl 102 (285)
T 2c07_A 42 GENKVALVTGAGRGIGREIAKMLAKSVSH---VICISRTQK------SCDSVVD-----EIKS-----FGYESSGYAGDV 102 (285)
T ss_dssp CSSCEEEEESTTSHHHHHHHHHHTTTSSE---EEEEESSHH------HHHHHHH-----HHHT-----TTCCEEEEECCT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHcCCE---EEEEcCCHH------HHHHHHH-----HHHh-----cCCceeEEECCC
Confidence 56899999999999999999999999865 777777532 2222111 1111 234688999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHHc---CCCceEE
Q psy6053 180 EADELAIKESDRQLLAS-------EVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKEM---KHLELFV 242 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~V 242 (614)
++++ +++.+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+... .+..++|
T Consensus 103 ~d~~------~v~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv 176 (285)
T 2c07_A 103 SKKE------EISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRII 176 (285)
T ss_dssp TCHH------HHHHHHHHHHHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEE
T ss_pred CCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEE
Confidence 9865 6666653 68999999997532 3567788999999988887776531 2567999
Q ss_pred EEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCCE
Q psy6053 243 HISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMPC 318 (614)
Q Consensus 243 ~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp~ 318 (614)
++||..+..... ....|+.||+..|.+++..+. .|+++
T Consensus 177 ~isS~~~~~~~~--------------------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v 218 (285)
T 2c07_A 177 NISSIVGLTGNV--------------------------------------GQANYSSSKAGVIGFTKSLAKELASRNITV 218 (285)
T ss_dssp EECCTHHHHCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred EECChhhccCCC--------------------------------------CCchHHHHHHHHHHHHHHHHHHHHHhCcEE
Confidence 999986532210 015799999988888877654 48999
Q ss_pred EEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEE
Q psy6053 319 LMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVH 398 (614)
Q Consensus 319 ~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyn 398 (614)
+++|||.|.++..... . ........... ....++.++|+|++++.++..... ...+++++
T Consensus 219 ~~v~Pg~v~t~~~~~~--------~-~~~~~~~~~~~---------~~~~~~~~~dvA~~~~~l~~~~~~--~~~G~~i~ 278 (285)
T 2c07_A 219 NAIAPGFISSDMTDKI--------S-EQIKKNIISNI---------PAGRMGTPEEVANLACFLSSDKSG--YINGRVFV 278 (285)
T ss_dssp EEEEECSBCC-----C--------C-HHHHHHHHTTC---------TTSSCBCHHHHHHHHHHHHSGGGT--TCCSCEEE
T ss_pred EEEEeCcEecCchhhc--------C-HHHHHHHHhhC---------CCCCCCCHHHHHHHHHHHhCCCcC--CCCCCEEE
Confidence 9999999976543211 1 11111221111 112378999999999988865431 13578899
Q ss_pred eccC
Q psy6053 399 LTSS 402 (614)
Q Consensus 399 i~~~ 402 (614)
+.++
T Consensus 279 v~gG 282 (285)
T 2c07_A 279 IDGG 282 (285)
T ss_dssp ESTT
T ss_pred eCCC
Confidence 8776
No 155
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=99.75 E-value=3.5e-17 Score=165.10 Aligned_cols=222 Identities=17% Similarity=0.175 Sum_probs=152.1
Q ss_pred cCCcEEEEeccccc-ccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCC
Q psy6053 100 FTGKTLFMTGASGF-LGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGD 178 (614)
Q Consensus 100 ~~~~~VLITGaTGF-lG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gD 178 (614)
+++|+|+||||||+ ||++++++|++.|.+ |+++.|... ++++..+ .+++. ...++.++.+|
T Consensus 20 l~~k~vlITGasg~GIG~~~a~~l~~~G~~---V~~~~r~~~------~~~~~~~-----~l~~~----~~~~~~~~~~D 81 (266)
T 3o38_A 20 LKGKVVLVTAAAGTGIGSTTARRALLEGAD---VVISDYHER------RLGETRD-----QLADL----GLGRVEAVVCD 81 (266)
T ss_dssp TTTCEEEESSCSSSSHHHHHHHHHHHTTCE---EEEEESCHH------HHHHHHH-----HHHTT----CSSCEEEEECC
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHCCCE---EEEecCCHH------HHHHHHH-----HHHhc----CCCceEEEEeC
Confidence 67899999999985 999999999999876 888888642 2222211 11110 23579999999
Q ss_pred CCCCCCCCCHHHHHHHhc-------cccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHHc----CCCce
Q psy6053 179 AEADELAIKESDRQLLAS-------EVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKEM----KHLEL 240 (614)
Q Consensus 179 l~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~----~~~k~ 240 (614)
+++++ +++.+++ .+|++||+||.... .+.++..+++|+.|+.++++.+... ++..+
T Consensus 82 l~~~~------~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~ 155 (266)
T 3o38_A 82 VTSTE------AVDALITQTVEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGV 155 (266)
T ss_dssp TTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEE
T ss_pred CCCHH------HHHHHHHHHHHHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeE
Confidence 99866 6666654 57999999996432 3567788999999999999988763 24468
Q ss_pred EEEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCC
Q psy6053 241 FVHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGM 316 (614)
Q Consensus 241 ~V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~gl 316 (614)
+|++||..+..... ....|+.||+..|.+++..+. .|+
T Consensus 156 iv~~sS~~~~~~~~--------------------------------------~~~~Y~~sKaa~~~~~~~la~e~~~~gi 197 (266)
T 3o38_A 156 IVNNASVLGWRAQH--------------------------------------SQSHYAAAKAGVMALTRCSAIEAVEFGV 197 (266)
T ss_dssp EEEECCGGGTCCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTE
T ss_pred EEEeCCHHHcCCCC--------------------------------------CCchHHHHHHHHHHHHHHHHHHHHHcCc
Confidence 99999987643210 015799999999998876654 589
Q ss_pred CEEEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccE
Q psy6053 317 PCLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSI 396 (614)
Q Consensus 317 p~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~v 396 (614)
++..++||.|..+..... .. ...... .........+.+.+|+|++++.++..... ...+++
T Consensus 198 ~v~~v~PG~v~t~~~~~~-------~~-~~~~~~---------~~~~~~~~r~~~~~dva~~i~~l~s~~~~--~~tG~~ 258 (266)
T 3o38_A 198 RINAVSPSIARHKFLEKT-------SS-SELLDR---------LASDEAFGRAAEPWEVAATIAFLASDYSS--YMTGEV 258 (266)
T ss_dssp EEEEEEECCCCC----------------------------------CCTTSSCCCHHHHHHHHHHHHSGGGT--TCCSCE
T ss_pred EEEEEeCCcccchhhhcc-------Cc-HHHHHH---------HHhcCCcCCCCCHHHHHHHHHHHcCcccc--CccCCE
Confidence 999999998876532110 00 000000 11122334567899999999988865432 236889
Q ss_pred EEeccC
Q psy6053 397 VHLTSS 402 (614)
Q Consensus 397 yni~~~ 402 (614)
+++.++
T Consensus 259 i~vdgG 264 (266)
T 3o38_A 259 VSVSSQ 264 (266)
T ss_dssp EEESSC
T ss_pred EEEcCC
Confidence 998876
No 156
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=99.75 E-value=3.4e-17 Score=167.05 Aligned_cols=221 Identities=15% Similarity=0.133 Sum_probs=153.6
Q ss_pred cCCcEEEEeccc--ccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeC
Q psy6053 100 FTGKTLFMTGAS--GFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISG 177 (614)
Q Consensus 100 ~~~~~VLITGaT--GFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~g 177 (614)
+++|+|+||||| |+||++++++|++.|.+ |+++.|+.. ..+.++++.+ ...++.++.+
T Consensus 19 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~---V~~~~r~~~---~~~~~~~l~~--------------~~~~~~~~~~ 78 (285)
T 2p91_A 19 LEGKRALITGVANERSIAYGIAKSFHREGAQ---LAFTYATPK---LEKRVREIAK--------------GFGSDLVVKC 78 (285)
T ss_dssp TTTCEEEECCCSSTTSHHHHHHHHHHHTTCE---EEEEESSGG---GHHHHHHHHH--------------HTTCCCEEEC
T ss_pred cCCCEEEEECCCCCCcHHHHHHHHHHHcCCE---EEEEeCCHH---HHHHHHHHHH--------------hcCCeEEEEc
Confidence 568999999999 99999999999999875 888888753 2333333311 1123678999
Q ss_pred CCCCCCCCCCHHHHHHHhc-------cccEEEEcccccCh-----------hHHHHHHHHHhHHHHHHHHHHHHHc-C-C
Q psy6053 178 DAEADELAIKESDRQLLAS-------EVDIMIHGAATIRF-----------DEALKKAVLLNTRGTKMMLSLAKEM-K-H 237 (614)
Q Consensus 178 Dl~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~-----------~~~~~~~~~~Nv~gt~~ll~la~~~-~-~ 237 (614)
|+++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++++... . +
T Consensus 79 Dl~~~~------~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~ 152 (285)
T 2p91_A 79 DVSLDE------DIKNLKKFLEENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGR 152 (285)
T ss_dssp CTTCHH------HHHHHHHHHHHHTSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTS
T ss_pred CCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc
Confidence 999865 6666654 68999999996532 2456788999999999999998763 1 2
Q ss_pred CceEEEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----
Q psy6053 238 LELFVHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN---- 313 (614)
Q Consensus 238 ~k~~V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~---- 313 (614)
-.++|++||..+.... | ....|+.||+..|.+.+..+.
T Consensus 153 ~g~iv~isS~~~~~~~----------~----------------------------~~~~Y~~sK~a~~~~~~~la~e~~~ 194 (285)
T 2p91_A 153 NGAIVTLSYYGAEKVV----------P----------------------------HYNVMGIAKAALESTVRYLAYDIAK 194 (285)
T ss_dssp CCEEEEEECGGGTSBC----------T----------------------------TTTHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCEEEEEccchhccCC----------C----------------------------CccHHHHHHHHHHHHHHHHHHHhcc
Confidence 3689999997653211 0 015799999999998877654
Q ss_pred CCCCEEEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCC
Q psy6053 314 NGMPCLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHR 393 (614)
Q Consensus 314 ~glp~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~ 393 (614)
.|+++++++||.|.++..... .............. + ...+.+++|+|++++.++..... ...
T Consensus 195 ~gi~v~~v~PG~v~t~~~~~~-------~~~~~~~~~~~~~~-------p--~~~~~~~~dva~~~~~l~s~~~~--~~t 256 (285)
T 2p91_A 195 HGHRINAISAGPVKTLAAYSI-------TGFHLLMEHTTKVN-------P--FGKPITIEDVGDTAVFLCSDWAR--AIT 256 (285)
T ss_dssp TTCEEEEEEECCCCCSCC--C-------TTHHHHHHHHHHHS-------T--TSSCCCHHHHHHHHHHHTSGGGT--TCC
T ss_pred cCcEEEEEEeCcccCchhhcc-------cchHHHHHHHHhcC-------C--CCCCcCHHHHHHHHHHHcCCccc--CCC
Confidence 589999999999987643211 11112222111110 0 11256899999999988854331 135
Q ss_pred ccEEEeccC
Q psy6053 394 QSIVHLTSS 402 (614)
Q Consensus 394 ~~vyni~~~ 402 (614)
+.++++.++
T Consensus 257 G~~~~vdgg 265 (285)
T 2p91_A 257 GEVVHVDNG 265 (285)
T ss_dssp SCEEEESTT
T ss_pred CCEEEECCC
Confidence 788998877
No 157
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=99.74 E-value=1.5e-17 Score=167.26 Aligned_cols=231 Identities=14% Similarity=0.100 Sum_probs=150.3
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
+++|+|+||||||+||++++++|++.|.+ |+++.|+... ..+.+.+. +... ...++.++.+|+
T Consensus 2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~---V~~~~r~~~~--~~~~~~~~--------~~~~----~~~~~~~~~~D~ 64 (260)
T 1x1t_A 2 LKGKVAVVTGSTSGIGLGIATALAAQGAD---IVLNGFGDAA--EIEKVRAG--------LAAQ----HGVKVLYDGADL 64 (260)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCE---EEEECCSCHH--HHHHHHHH--------HHHH----HTSCEEEECCCT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHcCCE---EEEEeCCcch--HHHHHHHH--------HHhc----cCCcEEEEECCC
Confidence 46899999999999999999999999876 8888886421 01111111 1110 124688999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcccccC-------hhHHHHHHHHHhHHHHHHHHHHHHHc---CCCceEE
Q psy6053 180 EADELAIKESDRQLLAS-------EVDIMIHGAATIR-------FDEALKKAVLLNTRGTKMMLSLAKEM---KHLELFV 242 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~-------~~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~V 242 (614)
++++ +++.+++ ++|++||+||... -.+.++..+++|+.|+.++++.+... .+..++|
T Consensus 65 ~~~~------~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv 138 (260)
T 1x1t_A 65 SKGE------AVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRII 138 (260)
T ss_dssp TSHH------HHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred CCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEE
Confidence 9865 6666665 6899999999653 13567788999999999998887531 2467999
Q ss_pred EEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCCE
Q psy6053 243 HISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMPC 318 (614)
Q Consensus 243 ~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp~ 318 (614)
++||..+.... | ....|+.||+..|.+.+..+. .|+++
T Consensus 139 ~isS~~~~~~~----------~----------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v 180 (260)
T 1x1t_A 139 NIASAHGLVAS----------A----------------------------NKSAYVAAKHGVVGFTKVTALETAGQGITA 180 (260)
T ss_dssp EECCGGGTSCC----------T----------------------------TCHHHHHHHHHHHHHHHHHHHHHTTTTEEE
T ss_pred EECcHHhCcCC----------C----------------------------CCchHHHHHHHHHHHHHHHHHHhccCCEEE
Confidence 99998654321 0 015799999999988876654 58999
Q ss_pred EEeecceeecccCCCC-ccccCCCCc--hHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCcc
Q psy6053 319 LMLRPSIIIPVWREPL-PGWTDNING--PTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQS 395 (614)
Q Consensus 319 ~IvRp~~I~g~~~~p~-~gw~d~~~g--~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~ 395 (614)
++++||.|.++..... +.+... .+ +........ ........+...+|+|++++.++..... ...+.
T Consensus 181 ~~v~Pg~v~t~~~~~~~~~~~~~-~~~~~~~~~~~~~--------~~~~p~~~~~~p~dva~~~~~l~s~~~~--~~tG~ 249 (260)
T 1x1t_A 181 NAICPGWVRTPLVEKQISALAEK-NGVDQETAARELL--------SEKQPSLQFVTPEQLGGTAVFLASDAAA--QITGT 249 (260)
T ss_dssp EEEEECCBCC-------------------------CH--------HHHCTTCCCBCHHHHHHHHHHHHSGGGT--TCCSC
T ss_pred EEEeecCccCchHHHhhhhhccc-cCCchHHHHHHHh--------hccCCCCCCcCHHHHHHHHHHHhChhhc--CCCCC
Confidence 9999999977643211 000000 00 000000000 0000113477899999999988865431 13678
Q ss_pred EEEeccC
Q psy6053 396 IVHLTSS 402 (614)
Q Consensus 396 vyni~~~ 402 (614)
++++.++
T Consensus 250 ~~~vdgG 256 (260)
T 1x1t_A 250 TVSVDGG 256 (260)
T ss_dssp EEEESTT
T ss_pred EEEECCC
Confidence 9998876
No 158
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=99.74 E-value=1.6e-17 Score=167.80 Aligned_cols=234 Identities=13% Similarity=0.065 Sum_probs=160.5
Q ss_pred ccccccCCcEEEEeccc--ccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeE
Q psy6053 95 RIGETFTGKTLFMTGAS--GFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKV 172 (614)
Q Consensus 95 ~i~~~~~~~~VLITGaT--GFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v 172 (614)
.....+++|+|+||||+ |+||++++++|++.|.+ |+++.|..+. .++++++.+ ...++
T Consensus 7 ~~~~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~---V~~~~r~~~~---~~~~~~~~~--------------~~~~~ 66 (271)
T 3ek2_A 7 HHMGFLDGKRILLTGLLSNRSIAYGIAKACKREGAE---LAFTYVGDRF---KDRITEFAA--------------EFGSE 66 (271)
T ss_dssp --CCTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCE---EEEEESSGGG---HHHHHHHHH--------------HTTCC
T ss_pred CCccccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCC---EEEEecchhh---HHHHHHHHH--------------HcCCc
Confidence 34456789999999999 99999999999999875 8888887432 344443321 12347
Q ss_pred EEEeCCCCCCCCCCCHHHHHHHhc-------cccEEEEcccccCh------------hHHHHHHHHHhHHHHHHHHHHHH
Q psy6053 173 LPISGDAEADELAIKESDRQLLAS-------EVDIMIHGAATIRF------------DEALKKAVLLNTRGTKMMLSLAK 233 (614)
Q Consensus 173 ~~v~gDl~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~------------~~~~~~~~~~Nv~gt~~ll~la~ 233 (614)
.++.+|+++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++.+.
T Consensus 67 ~~~~~Dv~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 140 (271)
T 3ek2_A 67 LVFPCDVADDA------QIDALFASLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAAL 140 (271)
T ss_dssp CEEECCTTCHH------HHHHHHHHHHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHG
T ss_pred EEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHH
Confidence 88999999866 6776665 57999999996532 34567889999999999999987
Q ss_pred Hc-CCCceEEEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHh
Q psy6053 234 EM-KHLELFVHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAM 312 (614)
Q Consensus 234 ~~-~~~k~~V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~ 312 (614)
.. .+-.++|++||..+..... ....|+.||+..+.+.+..+
T Consensus 141 ~~~~~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~~~~~la 182 (271)
T 3ek2_A 141 PMLSDDASLLTLSYLGAERAIP--------------------------------------NYNTMGLAKAALEASVRYLA 182 (271)
T ss_dssp GGEEEEEEEEEEECGGGTSBCT--------------------------------------TTTHHHHHHHHHHHHHHHHH
T ss_pred HHhccCceEEEEeccccccCCC--------------------------------------CccchhHHHHHHHHHHHHHH
Confidence 63 1234899999986543210 01579999999998887766
Q ss_pred h----CCCCEEEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhh
Q psy6053 313 N----NGMPCLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLS 388 (614)
Q Consensus 313 ~----~glp~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~ 388 (614)
. .|+++..++||.|..+..... .............. ....+...+|+|++++.++.....
T Consensus 183 ~e~~~~gi~v~~v~PG~v~T~~~~~~-------~~~~~~~~~~~~~~---------~~~~~~~pedva~~i~~l~s~~~~ 246 (271)
T 3ek2_A 183 VSLGAKGVRVNAISAGPIKTLAASGI-------KSFGKILDFVESNS---------PLKRNVTIEQVGNAGAFLLSDLAS 246 (271)
T ss_dssp HHHHTTTCEEEEEEECCC-----CCC-------HHHHHHHHHHHHHS---------TTSSCCCHHHHHHHHHHHHSGGGT
T ss_pred HHHHhcCcEEEEEecCcccchhhhcc-------cchHHHHHHHHhcC---------CcCCCCCHHHHHHHHHHHcCcccC
Confidence 4 589999999999976543211 11112222222111 112356789999999998865432
Q ss_pred cCCCCccEEEeccCCcccccHHHH
Q psy6053 389 QKEHRQSIVHLTSSQEWQVSWQEI 412 (614)
Q Consensus 389 ~~~~~~~vyni~~~~~~~it~~e~ 412 (614)
...++++++.++ ..++..++
T Consensus 247 --~~tG~~i~vdgG--~~~~~~~~ 266 (271)
T 3ek2_A 247 --GVTAEVMHVDSG--FNAVVGGM 266 (271)
T ss_dssp --TCCSEEEEESTT--GGGBCCCC
T ss_pred --CeeeeEEEECCC--eeeehhhh
Confidence 236889999988 66665554
No 159
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=99.74 E-value=1.1e-17 Score=170.04 Aligned_cols=229 Identities=11% Similarity=0.085 Sum_probs=153.0
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
+++|+|+||||||+||++++++|++.|.+ |+++.|+.. ++++..+ .++. ...++.++.+|+
T Consensus 20 l~~k~vlVTGas~gIG~~ia~~l~~~G~~---V~~~~r~~~------~~~~~~~-----~l~~-----~~~~~~~~~~Dv 80 (277)
T 2rhc_B 20 QDSEVALVTGATSGIGLEIARRLGKEGLR---VFVCARGEE------GLRTTLK-----ELRE-----AGVEADGRTCDV 80 (277)
T ss_dssp TTSCEEEEETCSSHHHHHHHHHHHHTTCE---EEEEESCHH------HHHHHHH-----HHHH-----TTCCEEEEECCT
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEeCCHH------HHHHHHH-----HHHh-----cCCceEEEECCC
Confidence 56899999999999999999999999875 888888642 2222111 1111 224688999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHHc-----CCCce
Q psy6053 180 EADELAIKESDRQLLAS-------EVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKEM-----KHLEL 240 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~-----~~~k~ 240 (614)
++++ +++.+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+... .+..+
T Consensus 81 ~~~~------~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~ 154 (277)
T 2rhc_B 81 RSVP------EIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGR 154 (277)
T ss_dssp TCHH------HHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEE
T ss_pred CCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeE
Confidence 9865 6666655 68999999996432 3456788999999999999987652 14579
Q ss_pred EEEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCC
Q psy6053 241 FVHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGM 316 (614)
Q Consensus 241 ~V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~gl 316 (614)
+|++||..+.... | ....|+.||+..|.+.+..+. .|+
T Consensus 155 iv~isS~~~~~~~----------~----------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi 196 (277)
T 2rhc_B 155 IVNIASTGGKQGV----------V----------------------------HAAPYSASKHGVVGFTKALGLELARTGI 196 (277)
T ss_dssp EEEECCGGGTSCC----------T----------------------------TCHHHHHHHHHHHHHHHHHHHHHTTTEE
T ss_pred EEEECccccccCC----------C----------------------------CCccHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 9999998653211 0 015799999999988877654 589
Q ss_pred CEEEeecceeecccCCCCcc-ccCCC-CchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCc
Q psy6053 317 PCLMLRPSIIIPVWREPLPG-WTDNI-NGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQ 394 (614)
Q Consensus 317 p~~IvRp~~I~g~~~~p~~g-w~d~~-~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~ 394 (614)
+++++|||.|.++....... +.+.. ............ ......++.++|+|++++.++..... ...+
T Consensus 197 ~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~p~~r~~~~~dvA~~v~~l~s~~~~--~~tG 265 (277)
T 2rhc_B 197 TVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITA---------RVPIGRYVQPSEVAEMVAYLIGPGAA--AVTA 265 (277)
T ss_dssp EEEEEEECSBCSHHHHHHHHHHHHHHTCCHHHHHHHHHH---------HSTTSSCBCHHHHHHHHHHHHSGGGT--TCCS
T ss_pred EEEEEecCcCcCchhhhhhhhcccccccchHHHHHHHHh---------cCCCCCCcCHHHHHHHHHHHhCchhc--CCCC
Confidence 99999999987653110000 00000 000001111111 01123478999999999988865431 1367
Q ss_pred cEEEeccC
Q psy6053 395 SIVHLTSS 402 (614)
Q Consensus 395 ~vyni~~~ 402 (614)
+++++.++
T Consensus 266 ~~~~vdGG 273 (277)
T 2rhc_B 266 QALNVCGG 273 (277)
T ss_dssp CEEEESTT
T ss_pred cEEEECCC
Confidence 89999876
No 160
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=99.74 E-value=2.6e-17 Score=166.79 Aligned_cols=222 Identities=15% Similarity=0.157 Sum_probs=146.8
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEE-EccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYIL-MRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGD 178 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~L-vR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gD 178 (614)
.++|+|+||||||+||++++++|++.|.+ |+++ .|+.. ..+.+.+.+ . + ...++.++.+|
T Consensus 24 ~~~k~vlITGas~gIG~a~a~~l~~~G~~---V~~~~~~~~~---~~~~~~~~~--------~----~-~~~~~~~~~~D 84 (272)
T 4e3z_A 24 SDTPVVLVTGGSRGIGAAVCRLAARQGWR---VGVNYAANRE---AADAVVAAI--------T----E-SGGEAVAIPGD 84 (272)
T ss_dssp CCSCEEEETTTTSHHHHHHHHHHHHTTCE---EEEEESSCHH---HHHHHHHHH--------H----H-TTCEEEEEECC
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCE---EEEEcCCChh---HHHHHHHHH--------H----h-cCCcEEEEEcC
Confidence 45789999999999999999999999876 6555 44321 112222111 1 1 33579999999
Q ss_pred CCCCCCCCCHHHHHHHhc-------cccEEEEcccccCh--------hHHHHHHHHHhHHHHHHHHHHHHHc------CC
Q psy6053 179 AEADELAIKESDRQLLAS-------EVDIMIHGAATIRF--------DEALKKAVLLNTRGTKMMLSLAKEM------KH 237 (614)
Q Consensus 179 l~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~--------~~~~~~~~~~Nv~gt~~ll~la~~~------~~ 237 (614)
+++++ +++.+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+... ++
T Consensus 85 l~~~~------~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~ 158 (272)
T 4e3z_A 85 VGNAA------DIAAMFSAVDRQFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQ 158 (272)
T ss_dssp TTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCC
T ss_pred CCCHH------HHHHHHHHHHHhCCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCC
Confidence 99865 6666655 67999999997542 3556788999999999999888653 12
Q ss_pred CceEEEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----
Q psy6053 238 LELFVHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN---- 313 (614)
Q Consensus 238 ~k~~V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~---- 313 (614)
..++|++||..+..... .....|+.||+..|.+++..+.
T Consensus 159 ~g~iv~isS~~~~~~~~-------------------------------------~~~~~Y~asKaa~~~~~~~la~e~~~ 201 (272)
T 4e3z_A 159 GGAIVNVSSMAAILGSA-------------------------------------TQYVDYAASKAAIDTFTIGLAREVAA 201 (272)
T ss_dssp CEEEEEECCTHHHHCCT-------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred CCEEEEEcchHhccCCC-------------------------------------CCcchhHHHHHHHHHHHHHHHHHHHH
Confidence 45799999986532110 0014699999999998876655
Q ss_pred CCCCEEEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCC
Q psy6053 314 NGMPCLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHR 393 (614)
Q Consensus 314 ~glp~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~ 393 (614)
.|+++.+++||.|.++.... ........... .......+..++|+|++++.++..... ...
T Consensus 202 ~gi~v~~v~PG~v~t~~~~~--------~~~~~~~~~~~---------~~~~~~~~~~~edvA~~i~~l~s~~~~--~~t 262 (272)
T 4e3z_A 202 EGIRVNAVRPGIIETDLHAS--------GGLPDRAREMA---------PSVPMQRAGMPEEVADAILYLLSPSAS--YVT 262 (272)
T ss_dssp GTEEEEEEEECSBC-----------------------------------CCTTSSCBCHHHHHHHHHHHHSGGGT--TCC
T ss_pred cCcEEEEEecCCCcCCcccc--------cCChHHHHHHh---------hcCCcCCCcCHHHHHHHHHHHhCCccc--ccc
Confidence 48999999999997764321 00000111111 111223356799999999998865432 136
Q ss_pred ccEEEeccC
Q psy6053 394 QSIVHLTSS 402 (614)
Q Consensus 394 ~~vyni~~~ 402 (614)
++++++.+|
T Consensus 263 G~~i~vdgG 271 (272)
T 4e3z_A 263 GSILNVSGG 271 (272)
T ss_dssp SCEEEESTT
T ss_pred CCEEeecCC
Confidence 889999876
No 161
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=99.74 E-value=5.9e-17 Score=162.79 Aligned_cols=224 Identities=13% Similarity=0.096 Sum_probs=153.0
Q ss_pred ccCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCC
Q psy6053 99 TFTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGD 178 (614)
Q Consensus 99 ~~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gD 178 (614)
.+++|++|||||+|+||++++++|++.|.+ |+++.|+.. ++++..+ +... ...++.++.+|
T Consensus 3 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~---V~~~~r~~~------~~~~~~~---------~~~~-~~~~~~~~~~D 63 (257)
T 3imf_A 3 AMKEKVVIITGGSSGMGKGMATRFAKEGAR---VVITGRTKE------KLEEAKL---------EIEQ-FPGQILTVQMD 63 (257)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCE---EEEEESCHH------HHHHHHH---------HHCC-STTCEEEEECC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEeCCHH------HHHHHHH---------HHHh-cCCcEEEEEcc
Confidence 367899999999999999999999999875 888888642 2222111 1111 33578999999
Q ss_pred CCCCCCCCCHHHHHHHhc-------cccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHH----cCCCce
Q psy6053 179 AEADELAIKESDRQLLAS-------EVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKE----MKHLEL 240 (614)
Q Consensus 179 l~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~----~~~~k~ 240 (614)
+++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++++.. .++..+
T Consensus 64 v~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~ 137 (257)
T 3imf_A 64 VRNTD------DIQKMIEQIDEKFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGN 137 (257)
T ss_dssp TTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCE
T ss_pred CCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcE
Confidence 99976 6666665 68999999995421 356778899999999999988832 134578
Q ss_pred EEEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh-----CC
Q psy6053 241 FVHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN-----NG 315 (614)
Q Consensus 241 ~V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~-----~g 315 (614)
+|++||..+..... ....|+.||+..+.+.+..+. .|
T Consensus 138 iv~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~l~~~la~e~~~~~g 179 (257)
T 3imf_A 138 IINMVATYAWDAGP--------------------------------------GVIHSAAAKAGVLAMTKTLAVEWGRKYG 179 (257)
T ss_dssp EEEECCGGGGSCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred EEEECchhhccCCC--------------------------------------CcHHHHHHHHHHHHHHHHHHHHhccccC
Confidence 99999986543210 014799999988888766542 48
Q ss_pred CCEEEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCcc
Q psy6053 316 MPCLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQS 395 (614)
Q Consensus 316 lp~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~ 395 (614)
+++..++||.|.++..... .|.+. .+...... ......+...+|+|++++.++..... -..++
T Consensus 180 Irvn~v~PG~v~t~~~~~~-~~~~~-----~~~~~~~~---------~~p~~r~~~pedvA~~v~~L~s~~~~--~itG~ 242 (257)
T 3imf_A 180 IRVNAIAPGPIERTGGADK-LWISE-----EMAKRTIQ---------SVPLGRLGTPEEIAGLAYYLCSDEAA--YINGT 242 (257)
T ss_dssp CEEEEEEECCBSSCCCC-------------CCSHHHHT---------TSTTCSCBCHHHHHHHHHHHHSGGGT--TCCSC
T ss_pred eEEEEEEECCCcCCcchhh-cccCH-----HHHHHHHh---------cCCCCCCcCHHHHHHHHHHHcCchhc--CccCC
Confidence 9999999999976632110 01100 00001111 11122467899999999988865432 13688
Q ss_pred EEEeccC
Q psy6053 396 IVHLTSS 402 (614)
Q Consensus 396 vyni~~~ 402 (614)
++++.++
T Consensus 243 ~i~vdGG 249 (257)
T 3imf_A 243 CMTMDGG 249 (257)
T ss_dssp EEEESTT
T ss_pred EEEECCC
Confidence 9999887
No 162
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=99.74 E-value=4.2e-17 Score=167.30 Aligned_cols=221 Identities=13% Similarity=0.068 Sum_probs=154.0
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
+++|+||||||+|+||++++++|++.|.+ |++..|..... ..+.+.+..+ . ...++.++.+|+
T Consensus 47 l~~k~vlVTGas~GIG~aia~~la~~G~~---V~~~~~~~~~~-~~~~~~~~~~------------~-~~~~~~~~~~Dv 109 (294)
T 3r3s_A 47 LKDRKALVTGGDSGIGRAAAIAYAREGAD---VAINYLPAEEE-DAQQVKALIE------------E-CGRKAVLLPGDL 109 (294)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEECCGGGHH-HHHHHHHHHH------------H-TTCCEEECCCCT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEeCCcchh-HHHHHHHHHH------------H-cCCcEEEEEecC
Confidence 57899999999999999999999999976 77777763221 1222222211 1 335789999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcccccC--------hhHHHHHHHHHhHHHHHHHHHHHHHc-CCCceEEE
Q psy6053 180 EADELAIKESDRQLLAS-------EVDIMIHGAATIR--------FDEALKKAVLLNTRGTKMMLSLAKEM-KHLELFVH 243 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~--------~~~~~~~~~~~Nv~gt~~ll~la~~~-~~~k~~V~ 243 (614)
++++ +++.+++ ++|++||+||... -.+.++..+++|+.|+.++++.+... .+-.++|+
T Consensus 110 ~d~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~ 183 (294)
T 3r3s_A 110 SDES------FARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIIT 183 (294)
T ss_dssp TSHH------HHHHHHHHHHHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEE
Confidence 9865 6665554 6899999999643 13567788999999999999999763 12248999
Q ss_pred EeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCCEE
Q psy6053 244 ISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMPCL 319 (614)
Q Consensus 244 vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp~~ 319 (614)
+||..+..... ....|+.||+..|.+.+..+. +|+++.
T Consensus 184 isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn 225 (294)
T 3r3s_A 184 TSSIQAYQPSP--------------------------------------HLLDYAATKAAILNYSRGLAKQVAEKGIRVN 225 (294)
T ss_dssp ECCGGGTSCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEE
T ss_pred ECChhhccCCC--------------------------------------CchHHHHHHHHHHHHHHHHHHHHhhcCeEEE
Confidence 99987643211 015799999999988877654 589999
Q ss_pred EeecceeecccCCC---CccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccE
Q psy6053 320 MLRPSIIIPVWREP---LPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSI 396 (614)
Q Consensus 320 IvRp~~I~g~~~~p---~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~v 396 (614)
.++||.|.++.... .+.+... .........+...+|+|++++.++..... -..+++
T Consensus 226 ~v~PG~v~t~~~~~~~~~~~~~~~-------------------~~~~~p~~r~~~p~dvA~~v~~L~s~~~~--~itG~~ 284 (294)
T 3r3s_A 226 IVAPGPIWTALQISGGQTQDKIPQ-------------------FGQQTPMKRAGQPAELAPVYVYLASQESS--YVTAEV 284 (294)
T ss_dssp EEEECSBCSHHHHTTTSCGGGSTT-------------------TTTTSTTSSCBCGGGGHHHHHHHHSGGGT--TCCSCE
T ss_pred EEecCcCccccccccCCCHHHHHH-------------------HHhcCCCCCCcCHHHHHHHHHHHhCcccc--CCCCCE
Confidence 99999998764110 0000000 01111223456789999999988865432 136889
Q ss_pred EEeccC
Q psy6053 397 VHLTSS 402 (614)
Q Consensus 397 yni~~~ 402 (614)
+++.+|
T Consensus 285 i~vdGG 290 (294)
T 3r3s_A 285 HGVCGG 290 (294)
T ss_dssp EEESTT
T ss_pred EEECCC
Confidence 999887
No 163
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=99.74 E-value=2.8e-17 Score=165.28 Aligned_cols=221 Identities=17% Similarity=0.168 Sum_probs=146.8
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
+++|+|+||||+|+||++++++|++.|.+ |+++.|+. ++++++.+ + ...++.++.+|+
T Consensus 7 l~~k~vlITGas~gIG~~~a~~l~~~G~~---V~~~~r~~------~~~~~~~~---------~----~~~~~~~~~~D~ 64 (261)
T 3n74_A 7 LEGKVALITGAGSGFGEGMAKRFAKGGAK---VVIVDRDK------AGAERVAG---------E----IGDAALAVAADI 64 (261)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCH------HHHHHHHH---------H----HCTTEEEEECCT
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCE---EEEEcCCH------HHHHHHHH---------H----hCCceEEEEecC
Confidence 56899999999999999999999999865 88888864 23332211 1 235689999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcccccC--------hhHHHHHHHHHhHHHHHHHHHHHHHcC-------C
Q psy6053 180 EADELAIKESDRQLLAS-------EVDIMIHGAATIR--------FDEALKKAVLLNTRGTKMMLSLAKEMK-------H 237 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~--------~~~~~~~~~~~Nv~gt~~ll~la~~~~-------~ 237 (614)
++++ +++++++ ++|++||+||... -.+.++..+++|+.|+.++++.+...- +
T Consensus 65 ~~~~------~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~ 138 (261)
T 3n74_A 65 SKEA------DVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQ 138 (261)
T ss_dssp TSHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCHH------HHHHHHHHHHHhcCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCC
Confidence 9865 6666665 6899999999754 235677789999999999888775420 1
Q ss_pred CceEEEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----
Q psy6053 238 LELFVHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN---- 313 (614)
Q Consensus 238 ~k~~V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~---- 313 (614)
..++|++||..+.... | ....|+.||+..+.+.+..+.
T Consensus 139 ~~~iv~isS~~~~~~~----------~----------------------------~~~~Y~asKaa~~~~~~~la~e~~~ 180 (261)
T 3n74_A 139 ECVILNVASTGAGRPR----------P----------------------------NLAWYNATKGWVVSVTKALAIELAP 180 (261)
T ss_dssp CEEEEEECCTTTTSCC----------T----------------------------TCHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred CeEEEEeCchhhcCCC----------C----------------------------CccHHHHHHHHHHHHHHHHHHHhhh
Confidence 3469999998653221 0 014699999999988877654
Q ss_pred CCCCEEEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCC
Q psy6053 314 NGMPCLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHR 393 (614)
Q Consensus 314 ~glp~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~ 393 (614)
+|+++..++||.|.++......+ . ....... ..........++.++|+|++++.++..... ...
T Consensus 181 ~gi~v~~v~PG~v~t~~~~~~~~---~--~~~~~~~---------~~~~~~~~~~~~~~~dva~~~~~l~s~~~~--~it 244 (261)
T 3n74_A 181 AKIRVVALNPVAGETPLLTTFMG---E--DSEEIRK---------KFRDSIPMGRLLKPDDLAEAAAFLCSPQAS--MIT 244 (261)
T ss_dssp GTEEEEEEEEC---------------------------------------CTTSSCCCHHHHHHHHHHHTSGGGT--TCC
T ss_pred cCcEEEEEecCcccChhhhhhcc---c--CcHHHHH---------HHhhcCCcCCCcCHHHHHHHHHHHcCCccc--CcC
Confidence 58999999999987764321100 0 0000000 011122234578999999999988854332 236
Q ss_pred ccEEEeccC
Q psy6053 394 QSIVHLTSS 402 (614)
Q Consensus 394 ~~vyni~~~ 402 (614)
++++++.++
T Consensus 245 G~~i~vdgG 253 (261)
T 3n74_A 245 GVALDVDGG 253 (261)
T ss_dssp SCEEEESTT
T ss_pred CcEEEecCC
Confidence 889999887
No 164
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=99.74 E-value=1.4e-17 Score=168.54 Aligned_cols=223 Identities=14% Similarity=0.149 Sum_probs=153.3
Q ss_pred cccccCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEE
Q psy6053 96 IGETFTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPI 175 (614)
Q Consensus 96 i~~~~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v 175 (614)
....+++|+||||||+|+||++++++|++.|.+ |+++.|.... ....+..+
T Consensus 8 ~~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~---V~~~~r~~~~--------------------------~~~~~~~~ 58 (269)
T 3vtz_A 8 HMEEFTDKVAIVTGGSSGIGLAVVDALVRYGAK---VVSVSLDEKS--------------------------DVNVSDHF 58 (269)
T ss_dssp --CTTTTCEEEESSTTSHHHHHHHHHHHHTTCE---EEEEESCC----------------------------CTTSSEEE
T ss_pred cccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEeCCchh--------------------------ccCceeEE
Confidence 445678999999999999999999999999876 8888887543 11356788
Q ss_pred eCCCCCCCCCCCHHHHHHHhc-------cccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHHc---CCC
Q psy6053 176 SGDAEADELAIKESDRQLLAS-------EVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKEM---KHL 238 (614)
Q Consensus 176 ~gDl~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~ 238 (614)
.+|+++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++.+... .+.
T Consensus 59 ~~Dv~~~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~ 132 (269)
T 3vtz_A 59 KIDVTNEE------EVKEAVEKTTKKYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGH 132 (269)
T ss_dssp ECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred EecCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC
Confidence 99999865 6666665 68999999997432 3557788999999999998876541 245
Q ss_pred ceEEEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh---CC
Q psy6053 239 ELFVHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN---NG 315 (614)
Q Consensus 239 k~~V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~---~g 315 (614)
.++|++||..+..... ....|+.||+..|.+.+..+. .+
T Consensus 133 g~iv~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~l~~~la~e~~~~ 174 (269)
T 3vtz_A 133 GSIINIASVQSYAATK--------------------------------------NAAAYVTSKHALLGLTRSVAIDYAPK 174 (269)
T ss_dssp EEEEEECCGGGTSBCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred CEEEEECchhhccCCC--------------------------------------CChhHHHHHHHHHHHHHHHHHHhcCC
Confidence 7899999987643211 015799999999999887665 38
Q ss_pred CCEEEeecceeecccCCCCcccc--CCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCC
Q psy6053 316 MPCLMLRPSIIIPVWREPLPGWT--DNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHR 393 (614)
Q Consensus 316 lp~~IvRp~~I~g~~~~p~~gw~--d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~ 393 (614)
+.+..++||.|.++......... ............... ......+..++|+|++++.++..... -..
T Consensus 175 i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~p~~r~~~pedvA~~v~~L~s~~~~--~it 243 (269)
T 3vtz_A 175 IRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGR---------QHPMGRIGRPEEVAEVVAFLASDRSS--FIT 243 (269)
T ss_dssp EEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHH---------HSTTSSCBCHHHHHHHHHHHHSGGGT--TCC
T ss_pred CEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHh---------cCCCCCCcCHHHHHHHHHHHhCCccC--CCc
Confidence 99999999998765311000000 000000111111111 11223467899999999988865432 236
Q ss_pred ccEEEeccC
Q psy6053 394 QSIVHLTSS 402 (614)
Q Consensus 394 ~~vyni~~~ 402 (614)
++++++.++
T Consensus 244 G~~i~vdGG 252 (269)
T 3vtz_A 244 GACLTVDGG 252 (269)
T ss_dssp SCEEEESTT
T ss_pred CcEEEECCC
Confidence 889999887
No 165
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=99.74 E-value=1.7e-17 Score=167.46 Aligned_cols=233 Identities=14% Similarity=0.177 Sum_probs=156.2
Q ss_pred cccccCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEE
Q psy6053 96 IGETFTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPI 175 (614)
Q Consensus 96 i~~~~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v 175 (614)
+...+++|++|||||+|+||++++++|++.|.+ |+++.|+. +++++..+ .+. + ...++.++
T Consensus 5 m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~---V~~~~r~~------~~~~~~~~-----~~~----~-~~~~~~~~ 65 (264)
T 3ucx_A 5 MGGLLTDKVVVISGVGPALGTTLARRCAEQGAD---LVLAARTV------ERLEDVAK-----QVT----D-TGRRALSV 65 (264)
T ss_dssp --CTTTTCEEEEESCCTTHHHHHHHHHHHTTCE---EEEEESCH------HHHHHHHH-----HHH----H-TTCCEEEE
T ss_pred cCCCcCCcEEEEECCCcHHHHHHHHHHHHCcCE---EEEEeCCH------HHHHHHHH-----HHH----h-cCCcEEEE
Confidence 445578999999999999999999999999876 88888863 22222211 111 1 33578999
Q ss_pred eCCCCCCCCCCCHHHHHHHhc-------cccEEEEcccccC----h----hHHHHHHHHHhHHHHHHHHHHHHHc--CCC
Q psy6053 176 SGDAEADELAIKESDRQLLAS-------EVDIMIHGAATIR----F----DEALKKAVLLNTRGTKMMLSLAKEM--KHL 238 (614)
Q Consensus 176 ~gDl~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~----~----~~~~~~~~~~Nv~gt~~ll~la~~~--~~~ 238 (614)
.+|+++++ +++.+++ ++|++||+||... + .+.++..+++|+.|+.++++.+... ++-
T Consensus 66 ~~Dv~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~ 139 (264)
T 3ucx_A 66 GTDITDDA------QVAHLVDETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESK 139 (264)
T ss_dssp ECCTTCHH------HHHHHHHHHHHHTSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHT
T ss_pred EcCCCCHH------HHHHHHHHHHHHcCCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC
Confidence 99999976 6666664 6899999998642 1 2567788999999999999887542 111
Q ss_pred ceEEEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----C
Q psy6053 239 ELFVHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----N 314 (614)
Q Consensus 239 k~~V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~ 314 (614)
.++|++||..+..... ....|+.||+..+.+.+..+. +
T Consensus 140 g~iv~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~~~~~la~e~~~~ 181 (264)
T 3ucx_A 140 GAVVNVNSMVVRHSQA--------------------------------------KYGAYKMAKSALLAMSQTLATELGEK 181 (264)
T ss_dssp CEEEEECCGGGGCCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CEEEEECcchhccCCC--------------------------------------ccHHHHHHHHHHHHHHHHHHHHhCcc
Confidence 5899999986543210 014799999999988876654 6
Q ss_pred CCCEEEeecceeecccCCCCcccc-CC-CCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCC
Q psy6053 315 GMPCLMLRPSIIIPVWREPLPGWT-DN-INGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEH 392 (614)
Q Consensus 315 glp~~IvRp~~I~g~~~~p~~gw~-d~-~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~ 392 (614)
|+++..++||.|.++......... .. ...+......... ......+..++|+|++++.++..... -.
T Consensus 182 gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~p~~r~~~p~dvA~~v~~L~s~~~~--~i 250 (264)
T 3ucx_A 182 GIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAA---------GSDLKRLPTEDEVASAILFMASDLAS--GI 250 (264)
T ss_dssp TCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHT---------TSSSSSCCBHHHHHHHHHHHHSGGGT--TC
T ss_pred CeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHhc---------cCCcccCCCHHHHHHHHHHHcCcccc--CC
Confidence 899999999999765321100000 00 0001111111111 22233577899999999988865432 23
Q ss_pred CccEEEeccC
Q psy6053 393 RQSIVHLTSS 402 (614)
Q Consensus 393 ~~~vyni~~~ 402 (614)
.++++++.++
T Consensus 251 tG~~i~vdGG 260 (264)
T 3ucx_A 251 TGQALDVNCG 260 (264)
T ss_dssp CSCEEEESTT
T ss_pred CCCEEEECCC
Confidence 6889999877
No 166
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=99.74 E-value=4.1e-17 Score=163.52 Aligned_cols=220 Identities=13% Similarity=0.111 Sum_probs=149.4
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
+++|+|+||||||+||++++++|++.|++ |+++.|+. +++++..+ + ...++.++.+|+
T Consensus 4 l~~k~vlVTGas~giG~~ia~~l~~~G~~---V~~~~r~~------~~~~~~~~---------~----~~~~~~~~~~D~ 61 (253)
T 1hxh_A 4 LQGKVALVTGGASGVGLEVVKLLLGEGAK---VAFSDINE------AAGQQLAA---------E----LGERSMFVRHDV 61 (253)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCE---EEEECSCH------HHHHHHHH---------H----HCTTEEEECCCT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEeCCH------HHHHHHHH---------H----cCCceEEEEccC
Confidence 56899999999999999999999999876 88888863 22332211 0 124688999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHH-c--CCCceEE
Q psy6053 180 EADELAIKESDRQLLAS-------EVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKE-M--KHLELFV 242 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~-~--~~~k~~V 242 (614)
++++ +++.+++ .+|++||+||.... .+.++..+++|+.|+..+.+.+.. + .+ .++|
T Consensus 62 ~~~~------~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g~iv 134 (253)
T 1hxh_A 62 SSEA------DWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSII 134 (253)
T ss_dssp TCHH------HHHHHHHHHHHHHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-CEEE
Confidence 9865 6666654 46999999997532 356778899999988777665432 1 24 7999
Q ss_pred EEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----C--CC
Q psy6053 243 HISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----N--GM 316 (614)
Q Consensus 243 ~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~--gl 316 (614)
++||..+..... ....|+.||+..|.+.+..+. . |+
T Consensus 135 ~isS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi 176 (253)
T 1hxh_A 135 NMASVSSWLPIE--------------------------------------QYAGYSASKAAVSALTRAAALSCRKQGYAI 176 (253)
T ss_dssp EECCGGGTSCCT--------------------------------------TBHHHHHHHHHHHHHHHHHHHHHHHHTCCE
T ss_pred EEcchhhcCCCC--------------------------------------CCccHHHHHHHHHHHHHHHHHHhhhcCCCe
Confidence 999987643210 014799999999998887654 3 89
Q ss_pred CEEEeecceeecccCCCCccccCCCCchHHHHHH-HhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCcc
Q psy6053 317 PCLMLRPSIIIPVWREPLPGWTDNINGPTGLLIG-AGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQS 395 (614)
Q Consensus 317 p~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~-~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~ 395 (614)
+++++|||.|.++.... +.+. ..... ..... .......+...+|+|++++.++..... ...++
T Consensus 177 ~v~~v~Pg~v~t~~~~~---~~~~-----~~~~~~~~~~~------~~~p~~~~~~~~dvA~~~~~l~s~~~~--~~tG~ 240 (253)
T 1hxh_A 177 RVNSIHPDGIYTPMMQA---SLPK-----GVSKEMVLHDP------KLNRAGRAYMPERIAQLVLFLASDESS--VMSGS 240 (253)
T ss_dssp EEEEEEESEECCHHHHH---HSCT-----TCCHHHHBCBT------TTBTTCCEECHHHHHHHHHHHHSGGGT--TCCSC
T ss_pred EEEEEEeCCccCchhhh---ccch-----hhhHHHHhhhh------ccCccCCCCCHHHHHHHHHHHcCcccc--CCCCc
Confidence 99999999998764210 0000 00000 10000 000112467899999999998865432 13578
Q ss_pred EEEeccC
Q psy6053 396 IVHLTSS 402 (614)
Q Consensus 396 vyni~~~ 402 (614)
++++.++
T Consensus 241 ~~~vdgG 247 (253)
T 1hxh_A 241 ELHADNS 247 (253)
T ss_dssp EEEESSS
T ss_pred EEEECCC
Confidence 8988776
No 167
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Probab=99.74 E-value=2.8e-17 Score=170.86 Aligned_cols=172 Identities=19% Similarity=0.294 Sum_probs=126.4
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
+++|+||||||||+||++++++|++.|++ |++.+|...+.+ .++++++.+ .++ . ...++.++.+|+
T Consensus 3 m~~k~vlVTGas~GIG~aia~~L~~~G~~---V~~~~r~~~~r~-~~~~~~l~~-----~~~----~-~~~~~~~~~~Dv 68 (324)
T 3u9l_A 3 MSKKIILITGASSGFGRLTAEALAGAGHR---VYASMRDIVGRN-ASNVEAIAG-----FAR----D-NDVDLRTLELDV 68 (324)
T ss_dssp --CCEEEESSCSSHHHHHHHHHHHHTTCE---EEEEESCTTTTT-HHHHHHHHH-----HHH----H-HTCCEEEEECCT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCE---EEEecCcccccC-HHHHHHHHH-----HHH----h-cCCcEEEEEeec
Confidence 35789999999999999999999999976 889999754332 233333211 011 1 235789999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHH----HHcCCCceE
Q psy6053 180 EADELAIKESDRQLLAS-------EVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLA----KEMKHLELF 241 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la----~~~~~~k~~ 241 (614)
++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++++ ++ .+..++
T Consensus 69 td~~------~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~-~~~g~i 141 (324)
T 3u9l_A 69 QSQV------SVDRAIDQIIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRR-QKHGLL 141 (324)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-HTCEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-cCCCEE
Confidence 9865 6777665 79999999996421 3556788999999999999998 44 366799
Q ss_pred EEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCC
Q psy6053 242 VHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMP 317 (614)
Q Consensus 242 V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp 317 (614)
|++||..+..... | ....|+.||+..|.+.+..+. .|++
T Consensus 142 V~isS~~~~~~~~---------~----------------------------~~~~Y~asKaa~~~~~~~la~el~~~gI~ 184 (324)
T 3u9l_A 142 IWISSSSSAGGTP---------P----------------------------YLAPYFAAKAAMDAIAVQYARELSRWGIE 184 (324)
T ss_dssp EEECCGGGTSCCC---------S----------------------------SCHHHHHHHHHHHHHHHHHHHHHHTTTEE
T ss_pred EEEecchhccCCC---------C----------------------------cchhHHHHHHHHHHHHHHHHHHhhhhCcE
Confidence 9999987642110 0 014799999999998887655 5899
Q ss_pred EEEeecceeecc
Q psy6053 318 CLMLRPSIIIPV 329 (614)
Q Consensus 318 ~~IvRp~~I~g~ 329 (614)
+++++||.|.++
T Consensus 185 v~~v~PG~v~t~ 196 (324)
T 3u9l_A 185 TSIIVPGAFTSG 196 (324)
T ss_dssp EEEEEECCC---
T ss_pred EEEEECCccccC
Confidence 999999999754
No 168
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=99.74 E-value=2.5e-17 Score=167.98 Aligned_cols=245 Identities=10% Similarity=0.075 Sum_probs=159.8
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcC------HHHHHHHHHhChhhHHhhhhccccccCeEE
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKN------ARQRIEELFASPLFNLLKSVHGQKIIDKVL 173 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~------~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~ 173 (614)
+++|+||||||+|+||++++++|++.|.+ |+++.|...... ..+++++... .+. . ...++.
T Consensus 8 l~gk~vlVTGas~gIG~~ia~~l~~~G~~---V~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~----~-~~~~~~ 74 (287)
T 3pxx_A 8 VQDKVVLVTGGARGQGRSHAVKLAEEGAD---IILFDICHDIETNEYPLATSRDLEEAGL-----EVE----K-TGRKAY 74 (287)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEECCSCCTTSCSCCCCHHHHHHHHH-----HHH----H-TTSCEE
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCCe---EEEEcccccccccccchhhhHHHHHHHH-----HHH----h-cCCceE
Confidence 67899999999999999999999999876 888888733211 1233332211 011 1 335799
Q ss_pred EEeCCCCCCCCCCCHHHHHHHhc-------cccEEEEcccccCh-----hHHHHHHHHHhHHHHHHHHHHHHHc-CCCce
Q psy6053 174 PISGDAEADELAIKESDRQLLAS-------EVDIMIHGAATIRF-----DEALKKAVLLNTRGTKMMLSLAKEM-KHLEL 240 (614)
Q Consensus 174 ~v~gDl~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~-----~~~~~~~~~~Nv~gt~~ll~la~~~-~~~k~ 240 (614)
++.+|+++++ +++++++ ++|++||+||.... .+.++..+++|+.|+.++++.+... .+-.+
T Consensus 75 ~~~~D~~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~ 148 (287)
T 3pxx_A 75 TAEVDVRDRA------AVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGAS 148 (287)
T ss_dssp EEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCE
T ss_pred EEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcE
Confidence 9999999876 6666655 78999999997542 3567889999999999999998763 23458
Q ss_pred EEEEeCceeccCCc--ccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----C
Q psy6053 241 FVHISTAYCHLQEK--VLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----N 314 (614)
Q Consensus 241 ~V~vST~~~~~~~~--~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~ 314 (614)
+|++||..+..... +..|.. + .| ....|+.||+..+.+.+..+. +
T Consensus 149 iv~isS~~~~~~~~~~~~~~~~---~---------------------~~-----~~~~Y~asK~a~~~~~~~la~e~~~~ 199 (287)
T 3pxx_A 149 IITTGSVAGLIAAAQPPGAGGP---Q---------------------GP-----GGAGYSYAKQLVDSYTLQLAAQLAPQ 199 (287)
T ss_dssp EEEECCHHHHHHHHCCC--------C---------------------HH-----HHHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred EEEeccchhccccccccccccc---C---------------------CC-----ccchHHHHHHHHHHHHHHHHHHHhhc
Confidence 99999986543211 111110 0 00 014799999999998877665 4
Q ss_pred CCCEEEeecceeecccCCCCcc---ccCCCC--chHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhc
Q psy6053 315 GMPCLMLRPSIIIPVWREPLPG---WTDNIN--GPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQ 389 (614)
Q Consensus 315 glp~~IvRp~~I~g~~~~p~~g---w~d~~~--g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~ 389 (614)
|+++..++||.|.++.....+. +..... ......... .........+..++|+|++++.++.....
T Consensus 200 gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~p~dva~~v~fL~s~~a~- 270 (287)
T 3pxx_A 200 SIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADALLAF--------PAMQAMPTPYVEASDISNAVCFLASDESR- 270 (287)
T ss_dssp TCEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHG--------GGGCSSSCSCBCHHHHHHHHHHHHSGGGT-
T ss_pred CcEEEEEecCccccccccccchhhhhccccccchhHHHHhhh--------hhhcccCCCCCCHHHHHhhHheecchhhc-
Confidence 8999999999997764321100 000000 000000000 00111114678999999999988865432
Q ss_pred CCCCccEEEeccC
Q psy6053 390 KEHRQSIVHLTSS 402 (614)
Q Consensus 390 ~~~~~~vyni~~~ 402 (614)
-..+.++++.+|
T Consensus 271 -~itG~~i~vdGG 282 (287)
T 3pxx_A 271 -YVTGLQFKVDAG 282 (287)
T ss_dssp -TCCSCEEEESTT
T ss_pred -CCCCceEeECch
Confidence 136889999887
No 169
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=99.74 E-value=3e-17 Score=166.28 Aligned_cols=221 Identities=14% Similarity=0.116 Sum_probs=152.5
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
+++|+|+||||+|+||++++++|++.|.+ |+++.|.... ..+.+.+.++ . ...++.++.+|+
T Consensus 27 l~~k~vlITGas~gIG~~la~~l~~~G~~---V~~~~r~~~~--~~~~~~~~~~------------~-~~~~~~~~~~D~ 88 (271)
T 4iin_A 27 FTGKNVLITGASKGIGAEIAKTLASMGLK---VWINYRSNAE--VADALKNELE------------E-KGYKAAVIKFDA 88 (271)
T ss_dssp CSCCEEEETTCSSHHHHHHHHHHHHTTCE---EEEEESSCHH--HHHHHHHHHH------------H-TTCCEEEEECCT
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEeCCCHH--HHHHHHHHHH------------h-cCCceEEEECCC
Confidence 57899999999999999999999999876 8888885421 1222222111 1 335789999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHHc---CCCceEE
Q psy6053 180 EADELAIKESDRQLLAS-------EVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKEM---KHLELFV 242 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~V 242 (614)
++++ +++++++ ++|++||+||.... .+.++..+++|+.|+.++++.+... .+..++|
T Consensus 89 ~~~~------~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv 162 (271)
T 4iin_A 89 ASES------DFIEAIQTIVQSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVV 162 (271)
T ss_dssp TCHH------HHHHHHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred CCHH------HHHHHHHHHHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEE
Confidence 9865 6666654 78999999997532 3567788999999999988877542 2557899
Q ss_pred EEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCCE
Q psy6053 243 HISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMPC 318 (614)
Q Consensus 243 ~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp~ 318 (614)
++||..+..... ....|+.||+..|.+++..+. .|+++
T Consensus 163 ~isS~~~~~~~~--------------------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v 204 (271)
T 4iin_A 163 NVASIIGERGNM--------------------------------------GQTNYSASKGGMIAMSKSFAYEGALRNIRF 204 (271)
T ss_dssp EECCHHHHHCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHHHTTTEEE
T ss_pred EEechhhcCCCC--------------------------------------CchHhHHHHHHHHHHHHHHHHHHHHhCcEE
Confidence 999986532210 015799999999988877654 58999
Q ss_pred EEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEE
Q psy6053 319 LMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVH 398 (614)
Q Consensus 319 ~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyn 398 (614)
..++||.|..+.....+. ..... .........+.+.+|+|++++.++..... -..+++++
T Consensus 205 ~~v~PG~v~T~~~~~~~~---------~~~~~---------~~~~~~~~~~~~p~dvA~~i~~l~s~~~~--~itG~~i~ 264 (271)
T 4iin_A 205 NSVTPGFIETDMNANLKD---------ELKAD---------YVKNIPLNRLGSAKEVAEAVAFLLSDHSS--YITGETLK 264 (271)
T ss_dssp EEEEECSBCCC------------------------------CGGGCTTCSCBCHHHHHHHHHHHHSGGGT--TCCSCEEE
T ss_pred EEEEeCcccCCchhhhcH---------HHHHH---------HHhcCCcCCCcCHHHHHHHHHHHhCCCcC--CCcCCEEE
Confidence 999999886553221110 00000 11111223477899999999988865432 23688999
Q ss_pred eccC
Q psy6053 399 LTSS 402 (614)
Q Consensus 399 i~~~ 402 (614)
+.+|
T Consensus 265 vdGG 268 (271)
T 4iin_A 265 VNGG 268 (271)
T ss_dssp ESTT
T ss_pred eCCC
Confidence 8876
No 170
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=99.73 E-value=6.2e-17 Score=161.81 Aligned_cols=218 Identities=14% Similarity=0.151 Sum_probs=147.0
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
+++|+|+||||||+||++++++|++.|++ |+++.|... +++++.+ +. ...++.++.+|+
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~---V~~~~r~~~-----~~~~~~~--------~~-----~~~~~~~~~~Dv 63 (249)
T 2ew8_A 5 LKDKLAVITGGANGIGRAIAERFAVEGAD---IAIADLVPA-----PEAEAAI--------RN-----LGRRVLTVKCDV 63 (249)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESSCC-----HHHHHHH--------HH-----TTCCEEEEECCT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEcCCch-----hHHHHHH--------Hh-----cCCcEEEEEeec
Confidence 56899999999999999999999999875 888888752 1122111 00 224688999999
Q ss_pred CCCCCCCCHHHHHHHh-------ccccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHH----HHcCCCceE
Q psy6053 180 EADELAIKESDRQLLA-------SEVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLA----KEMKHLELF 241 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~-------~~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la----~~~~~~k~~ 241 (614)
++++ +++.++ .++|++||+||.... .+.++..+++|+.|+.++++.+ ++ .+..++
T Consensus 64 ~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~-~~~g~i 136 (249)
T 2ew8_A 64 SQPG------DVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKR-NGWGRI 136 (249)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-HTCEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH-cCCeEE
Confidence 9865 666654 378999999996532 3557788999999988887774 34 256799
Q ss_pred EEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCC
Q psy6053 242 VHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMP 317 (614)
Q Consensus 242 V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp 317 (614)
|++||..+..... ....|+.||+..|.+.+..+. .|++
T Consensus 137 v~isS~~~~~~~~--------------------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~ 178 (249)
T 2ew8_A 137 INLTSTTYWLKIE--------------------------------------AYTHYISTKAANIGFTRALASDLGKDGIT 178 (249)
T ss_dssp EEECCGGGGSCCS--------------------------------------SCHHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred EEEcchhhccCCC--------------------------------------CchhHHHHHHHHHHHHHHHHHHHHhcCcE
Confidence 9999987643210 015799999999998877654 5899
Q ss_pred EEEeecceeecccCC-CCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccE
Q psy6053 318 CLMLRPSIIIPVWRE-PLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSI 396 (614)
Q Consensus 318 ~~IvRp~~I~g~~~~-p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~v 396 (614)
+++++||.|.++... ... ... ........ .....+...+|+|++++.++..... ...+++
T Consensus 179 v~~v~Pg~v~t~~~~~~~~-------~~~---~~~~~~~~-------~~~~~~~~p~dva~~~~~l~s~~~~--~~tG~~ 239 (249)
T 2ew8_A 179 VNAIAPSLVRTATTEASAL-------SAM---FDVLPNML-------QAIPRLQVPLDLTGAAAFLASDDAS--FITGQT 239 (249)
T ss_dssp EEEEEECCC----------------------------CTT-------SSSCSCCCTHHHHHHHHHHTSGGGT--TCCSCE
T ss_pred EEEEecCcCcCccchhccc-------cch---hhHHHHhh-------CccCCCCCHHHHHHHHHHHcCcccC--CCCCcE
Confidence 999999999775422 100 000 00000000 0112367899999999988864321 136788
Q ss_pred EEeccC
Q psy6053 397 VHLTSS 402 (614)
Q Consensus 397 yni~~~ 402 (614)
+++.++
T Consensus 240 ~~vdGG 245 (249)
T 2ew8_A 240 LAVDGG 245 (249)
T ss_dssp EEESSS
T ss_pred EEECCC
Confidence 988776
No 171
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=99.73 E-value=6.9e-17 Score=164.21 Aligned_cols=223 Identities=11% Similarity=0.106 Sum_probs=153.9
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
+++|+||||||+|+||++++++|++.|.+ |+++.|.. +++++..+. ...++.++.+|+
T Consensus 25 l~~k~vlVTGas~GIG~aia~~l~~~G~~---V~~~~r~~------~~~~~~~~~-------------~~~~~~~~~~Dv 82 (277)
T 4dqx_A 25 LNQRVCIVTGGGSGIGRATAELFAKNGAY---VVVADVNE------DAAVRVANE-------------IGSKAFGVRVDV 82 (277)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESSH------HHHHHHHHH-------------HCTTEEEEECCT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEeCCH------HHHHHHHHH-------------hCCceEEEEecC
Confidence 56899999999999999999999999875 88888863 223322110 224688999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHHc---CCCceEE
Q psy6053 180 EADELAIKESDRQLLAS-------EVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKEM---KHLELFV 242 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~V 242 (614)
++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++.+... .+..++|
T Consensus 83 ~d~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv 156 (277)
T 4dqx_A 83 SSAK------DAESMVEKTTAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSII 156 (277)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEE
Confidence 9876 6666665 68999999996421 3567788999999999998887542 2446899
Q ss_pred EEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCCE
Q psy6053 243 HISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMPC 318 (614)
Q Consensus 243 ~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp~ 318 (614)
++||..+..... ....|+.||+..+.+.+..+. +|+++
T Consensus 157 ~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gi~v 198 (277)
T 4dqx_A 157 NTTSYTATSAIA--------------------------------------DRTAYVASKGAISSLTRAMAMDHAKEGIRV 198 (277)
T ss_dssp EECCGGGTSCCT--------------------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred EECchhhCcCCC--------------------------------------CChhHHHHHHHHHHHHHHHHHHhhhcCeEE
Confidence 999986542210 015799999999988877654 58999
Q ss_pred EEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEE
Q psy6053 319 LMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVH 398 (614)
Q Consensus 319 ~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyn 398 (614)
..++||.|.++... ........+......... ......+..++|+|++++.++..... -..+++++
T Consensus 199 n~v~PG~v~T~~~~---~~~~~~~~~~~~~~~~~~---------~~~~~r~~~pedvA~~v~~L~s~~~~--~itG~~i~ 264 (277)
T 4dqx_A 199 NAVAPGTIDSPYFT---KIFAEAKDPAKLRSDFNA---------RAVMDRMGTAEEIAEAMLFLASDRSR--FATGSILT 264 (277)
T ss_dssp EEEEECSBCCHHHH---HHHHTCSCHHHHHHHHHT---------TSTTCSCBCHHHHHHHHHHHHSGGGT--TCCSCEEE
T ss_pred EEEeeCcCcCchhh---hhcccccchhHHHHHHHh---------cCcccCCcCHHHHHHHHHHHhCCccC--CCcCCEEE
Confidence 99999988654200 000000111111111111 12223467899999999988865432 13688999
Q ss_pred eccC
Q psy6053 399 LTSS 402 (614)
Q Consensus 399 i~~~ 402 (614)
+.++
T Consensus 265 vdGG 268 (277)
T 4dqx_A 265 VDGG 268 (277)
T ss_dssp ESSS
T ss_pred ECCc
Confidence 9887
No 172
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=99.73 E-value=1.9e-17 Score=167.65 Aligned_cols=219 Identities=11% Similarity=0.140 Sum_probs=151.9
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
+++|+|+||||+|+||++++++|++.|.+ |+++.|.... ..+.+.+.+ + . ...++.++.+|+
T Consensus 26 l~~k~vlVTGas~gIG~aia~~la~~G~~---V~~~~~~~~~--~~~~~~~~~--------~----~-~~~~~~~~~~D~ 87 (269)
T 4dmm_A 26 LTDRIALVTGASRGIGRAIALELAAAGAK---VAVNYASSAG--AADEVVAAI--------A----A-AGGEAFAVKADV 87 (269)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTCE---EEEEESSCHH--HHHHHHHHH--------H----H-TTCCEEEEECCT
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEeCCChH--HHHHHHHHH--------H----h-cCCcEEEEECCC
Confidence 57899999999999999999999999876 7777875321 112222111 1 1 335789999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHHc---CCCceEE
Q psy6053 180 EADELAIKESDRQLLAS-------EVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKEM---KHLELFV 242 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~V 242 (614)
++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++++... .+..++|
T Consensus 88 ~d~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv 161 (269)
T 4dmm_A 88 SQES------EVEALFAAVIERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRII 161 (269)
T ss_dssp TSHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEE
Confidence 9976 6666665 68999999997532 3567788999999999999887431 2456899
Q ss_pred EEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCCE
Q psy6053 243 HISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMPC 318 (614)
Q Consensus 243 ~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp~ 318 (614)
++||..+..... ....|+.||+..+.+.+..+. +|+++
T Consensus 162 ~isS~~~~~~~~--------------------------------------~~~~Y~asK~a~~~l~~~la~e~~~~gi~v 203 (269)
T 4dmm_A 162 NIASVVGEMGNP--------------------------------------GQANYSAAKAGVIGLTKTVAKELASRGITV 203 (269)
T ss_dssp EECCHHHHHCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEE
T ss_pred EECchhhcCCCC--------------------------------------CchhHHHHHHHHHHHHHHHHHHHhhhCcEE
Confidence 999986532210 015799999977777665544 68999
Q ss_pred EEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEE
Q psy6053 319 LMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVH 398 (614)
Q Consensus 319 ~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyn 398 (614)
..++||.|.++.... . .-...... .....+..++|+|++++.++..+... -..+++++
T Consensus 204 n~v~PG~v~T~~~~~-----------~-~~~~~~~~---------~p~~r~~~~~dvA~~v~~l~s~~~~~-~itG~~i~ 261 (269)
T 4dmm_A 204 NAVAPGFIATDMTSE-----------L-AAEKLLEV---------IPLGRYGEAAEVAGVVRFLAADPAAA-YITGQVIN 261 (269)
T ss_dssp EEEEECCBTTSCSCH-----------H-HHHHHGGG---------CTTSSCBCHHHHHHHHHHHHHCGGGG-GCCSCEEE
T ss_pred EEEEECCCcCccccc-----------c-cHHHHHhc---------CCCCCCCCHHHHHHHHHHHhCCcccC-CCcCCEEE
Confidence 999999987653210 0 00111111 11224677899999999988763210 13588999
Q ss_pred eccC
Q psy6053 399 LTSS 402 (614)
Q Consensus 399 i~~~ 402 (614)
+.++
T Consensus 262 vdGG 265 (269)
T 4dmm_A 262 IDGG 265 (269)
T ss_dssp ESTT
T ss_pred ECCC
Confidence 9877
No 173
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=99.73 E-value=5.4e-17 Score=163.06 Aligned_cols=226 Identities=14% Similarity=0.116 Sum_probs=151.1
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCCC
Q psy6053 102 GKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAEA 181 (614)
Q Consensus 102 ~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~~ 181 (614)
+|+++||||||+||++++++|++.|.+ |+++.|+...... +.+.+. ++ . ...++.++.+|+++
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~---V~~~~r~~~~~~~-~~~~~~--------~~----~-~~~~~~~~~~Dv~~ 64 (258)
T 3a28_C 2 SKVAMVTGGAQGIGRGISEKLAADGFD---IAVADLPQQEEQA-AETIKL--------IE----A-ADQKAVFVGLDVTD 64 (258)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCE---EEEEECGGGHHHH-HHHHHH--------HH----T-TTCCEEEEECCTTC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEeCCcchHHH-HHHHHH--------HH----h-cCCcEEEEEccCCC
Confidence 689999999999999999999999876 8888887532101 111111 11 1 23468899999998
Q ss_pred CCCCCCHHHHHHHhc-------cccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHHc---CCC-ceEEE
Q psy6053 182 DELAIKESDRQLLAS-------EVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKEM---KHL-ELFVH 243 (614)
Q Consensus 182 ~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~-k~~V~ 243 (614)
++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++.+... .+. .++|+
T Consensus 65 ~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~ 138 (258)
T 3a28_C 65 KA------NFDSAIDEAAEKLGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIIN 138 (258)
T ss_dssp HH------HHHHHHHHHHHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEE
T ss_pred HH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEE
Confidence 65 6666655 78999999996532 3567788999999999999888652 244 79999
Q ss_pred EeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCCEE
Q psy6053 244 ISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMPCL 319 (614)
Q Consensus 244 vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp~~ 319 (614)
+||..+.... | ....|+.||+..|.+.+..+. .|+++.
T Consensus 139 isS~~~~~~~----------~----------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn 180 (258)
T 3a28_C 139 AASIAAIQGF----------P----------------------------ILSAYSTTKFAVRGLTQAAAQELAPKGHTVN 180 (258)
T ss_dssp ECCGGGTSCC----------T----------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEE
T ss_pred ECcchhccCC----------C----------------------------CchhHHHHHHHHHHHHHHHHHHHHhhCeEEE
Confidence 9998653321 0 015799999999988877654 589999
Q ss_pred EeecceeecccCCCCccccCCC---Cch--HHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCc
Q psy6053 320 MLRPSIIIPVWREPLPGWTDNI---NGP--TGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQ 394 (614)
Q Consensus 320 IvRp~~I~g~~~~p~~gw~d~~---~g~--~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~ 394 (614)
+++||.|..+... .+.... .++ .......... .....+...+|+|++++.++..... -..+
T Consensus 181 ~v~PG~v~t~~~~---~~~~~~~~~~~~~~~~~~~~~~~~---------~p~~r~~~p~dvA~~v~~l~s~~~~--~~tG 246 (258)
T 3a28_C 181 AYAPGIVGTGMWE---QIDAELSKINGKPIGENFKEYSSS---------IALGRPSVPEDVAGLVSFLASENSN--YVTG 246 (258)
T ss_dssp EEEECCBCSHHHH---HHHHHHHHHHCCCTTHHHHHHHTT---------CTTSSCBCHHHHHHHHHHHHSGGGT--TCCS
T ss_pred EEECCccCChhhh---hhhhhhccccCCchHHHHHHHHhc---------CCCCCccCHHHHHHHHHHHhCcccC--CCCC
Confidence 9999988554210 000000 000 0011111110 0112367899999999988865431 1367
Q ss_pred cEEEeccC
Q psy6053 395 SIVHLTSS 402 (614)
Q Consensus 395 ~vyni~~~ 402 (614)
+++++.++
T Consensus 247 ~~i~vdGG 254 (258)
T 3a28_C 247 QVMLVDGG 254 (258)
T ss_dssp CEEEESSS
T ss_pred CEEEECCC
Confidence 88988876
No 174
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=99.73 E-value=3.7e-17 Score=164.43 Aligned_cols=231 Identities=15% Similarity=0.077 Sum_probs=149.8
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
+++|+|+||||||+||++++++|++.|++ |+++.|+. +++++..+ .+....+ ..++.++.+|+
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~---V~~~~r~~------~~~~~~~~-----~~~~~~~---~~~~~~~~~D~ 67 (260)
T 2z1n_A 5 IQGKLAVVTAGSSGLGFASALELARNGAR---LLLFSRNR------EKLEAAAS-----RIASLVS---GAQVDIVAGDI 67 (260)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCH------HHHHHHHH-----HHHHHST---TCCEEEEECCT
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCE---EEEEeCCH------HHHHHHHH-----HHHhcCC---CCeEEEEEccC
Confidence 56899999999999999999999999875 88888863 22222211 1111000 12688999999
Q ss_pred CCCCCCCCHHHHHHHhc------cccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHHc---CCCceEEE
Q psy6053 180 EADELAIKESDRQLLAS------EVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKEM---KHLELFVH 243 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~V~ 243 (614)
++++ +++.+++ ++|+|||+||.... .+.++..+++|+.|+.++.+.+... .+..++|+
T Consensus 68 ~~~~------~v~~~~~~~~~~~gid~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~ 141 (260)
T 2z1n_A 68 REPG------DIDRLFEKARDLGGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVY 141 (260)
T ss_dssp TCHH------HHHHHHHHHHHTTCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred CCHH------HHHHHHHHHHHhcCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEE
Confidence 9865 6777665 59999999996432 3467788999999997776655421 35689999
Q ss_pred EeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCCEE
Q psy6053 244 ISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMPCL 319 (614)
Q Consensus 244 vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp~~ 319 (614)
+||..+..... ....|+.||+..+.+.+..+. .|++++
T Consensus 142 isS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~ 183 (260)
T 2z1n_A 142 IGSVTLLRPWQ--------------------------------------DLALSNIMRLPVIGVVRTLALELAPHGVTVN 183 (260)
T ss_dssp ECCGGGTSCCT--------------------------------------TBHHHHHHTHHHHHHHHHHHHHHGGGTEEEE
T ss_pred ECchhhcCCCC--------------------------------------CCchhHHHHHHHHHHHHHHHHHHhhhCeEEE
Confidence 99987643210 015799999999888876654 589999
Q ss_pred EeecceeecccCCCCc-cccCCCCchHHH-HHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEE
Q psy6053 320 MLRPSIIIPVWREPLP-GWTDNINGPTGL-LIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIV 397 (614)
Q Consensus 320 IvRp~~I~g~~~~p~~-gw~d~~~g~~~~-~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vy 397 (614)
++|||.|.++...... ........+... ..... .......+...+|+|++++.++..... ...++++
T Consensus 184 ~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~p~~r~~~~~dva~~v~~l~s~~~~--~~tG~~i 252 (260)
T 2z1n_A 184 AVLPSLILTDRVRSLAEERARRSGITVEEALKSMA---------SRIPMGRVGKPEELASVVAFLASEKAS--FITGAVI 252 (260)
T ss_dssp EEEECHHHHCCCC--------------------------------CCTTSSCCCHHHHHHHHHHHTSGGGT--TCCSCEE
T ss_pred EEEECCcccchhhhhhhhhhcccCCcHHHHHHHHH---------hcCCCCCccCHHHHHHHHHHHhCcccc--CCCCCEE
Confidence 9999999876432100 000000000000 00000 011112367899999999988865432 1367888
Q ss_pred EeccC
Q psy6053 398 HLTSS 402 (614)
Q Consensus 398 ni~~~ 402 (614)
++.++
T Consensus 253 ~vdGG 257 (260)
T 2z1n_A 253 PVDGG 257 (260)
T ss_dssp EESTT
T ss_pred EeCCC
Confidence 88776
No 175
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=99.73 E-value=6.9e-17 Score=162.66 Aligned_cols=211 Identities=11% Similarity=0.125 Sum_probs=145.8
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
+++|+||||||+|+||++++++|++.|.+ |+++.|.... ..+.+.+ .++.++.+|+
T Consensus 25 l~~k~vlVTGas~gIG~aia~~l~~~G~~---V~~~~r~~~~--~~~~~~~-------------------~~~~~~~~Dv 80 (260)
T 3gem_A 25 LSSAPILITGASQRVGLHCALRLLEHGHR---VIISYRTEHA--SVTELRQ-------------------AGAVALYGDF 80 (260)
T ss_dssp --CCCEEESSTTSHHHHHHHHHHHHTTCC---EEEEESSCCH--HHHHHHH-------------------HTCEEEECCT
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEeCChHH--HHHHHHh-------------------cCCeEEECCC
Confidence 56899999999999999999999999987 8889997642 1222211 1367899999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcccccCh------hHHHHHHHHHhHHHHHHHHHHHHHc---CCCceEEE
Q psy6053 180 EADELAIKESDRQLLAS-------EVDIMIHGAATIRF------DEALKKAVLLNTRGTKMMLSLAKEM---KHLELFVH 243 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~V~ 243 (614)
++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++.+... .+..++|+
T Consensus 81 ~~~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~ 154 (260)
T 3gem_A 81 SCET------GIMAFIDLLKTQTSSLRAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVH 154 (260)
T ss_dssp TSHH------HHHHHHHHHHHHCSCCSEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEE
T ss_pred CCHH------HHHHHHHHHHHhcCCCCEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEE
Confidence 9865 6666664 58999999996431 3456778999999999999887542 34568999
Q ss_pred EeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh---CCCCEEE
Q psy6053 244 ISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN---NGMPCLM 320 (614)
Q Consensus 244 vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~---~glp~~I 320 (614)
+||..+..... ....|+.||+..|.+.+..+. .++++..
T Consensus 155 isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~l~~~la~e~~~~Irvn~ 196 (260)
T 3gem_A 155 ISDDVTRKGSS--------------------------------------KHIAYCATKAGLESLTLSFAARFAPLVKVNG 196 (260)
T ss_dssp ECCGGGGTCCS--------------------------------------SCHHHHHHHHHHHHHHHHHHHHHTTTCEEEE
T ss_pred ECChhhcCCCC--------------------------------------CcHhHHHHHHHHHHHHHHHHHHHCCCCEEEE
Confidence 99986543210 015799999999988877665 3699999
Q ss_pred eecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEec
Q psy6053 321 LRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLT 400 (614)
Q Consensus 321 vRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~ 400 (614)
++||.|..+...+ .......... ....-+..++|+|++++.++.... ..++++++.
T Consensus 197 v~PG~v~t~~~~~-----------~~~~~~~~~~---------~p~~r~~~~edva~~v~~L~~~~~----itG~~i~vd 252 (260)
T 3gem_A 197 IAPALLMFQPKDD-----------AAYRANALAK---------SALGIEPGAEVIYQSLRYLLDSTY----VTGTTLTVN 252 (260)
T ss_dssp EEECTTCC-----------------------------------CCSCCCCCTHHHHHHHHHHHHCSS----CCSCEEEES
T ss_pred EeecccccCCCCC-----------HHHHHHHHhc---------CCCCCCCCHHHHHHHHHHHhhCCC----CCCCEEEEC
Confidence 9999886542110 0011111111 011124568999999999884332 378899998
Q ss_pred cC
Q psy6053 401 SS 402 (614)
Q Consensus 401 ~~ 402 (614)
++
T Consensus 253 GG 254 (260)
T 3gem_A 253 GG 254 (260)
T ss_dssp TT
T ss_pred CC
Confidence 87
No 176
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=99.73 E-value=3.7e-17 Score=165.01 Aligned_cols=217 Identities=14% Similarity=0.116 Sum_probs=149.7
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
+++|+||||||||+||++++++|++.|.+ |+++.|.... ..++.++.+|+
T Consensus 6 l~~k~vlVTGas~gIG~~ia~~l~~~G~~---V~~~~r~~~~---------------------------~~~~~~~~~Dl 55 (264)
T 2dtx_A 6 LRDKVVIVTGASMGIGRAIAERFVDEGSK---VIDLSIHDPG---------------------------EAKYDHIECDV 55 (264)
T ss_dssp GTTCEEEEESCSSHHHHHHHHHHHHTTCE---EEEEESSCCC---------------------------SCSSEEEECCT
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEecCccc---------------------------CCceEEEEecC
Confidence 56899999999999999999999999875 8888987532 13578899999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHHc---CCCceEE
Q psy6053 180 EADELAIKESDRQLLAS-------EVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKEM---KHLELFV 242 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~V 242 (614)
++++ +++.+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+... .+..++|
T Consensus 56 ~~~~------~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv 129 (264)
T 2dtx_A 56 TNPD------QVKASIDHIFKEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIV 129 (264)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEE
Confidence 9865 6666665 68999999996532 3567788999999999998888652 2457999
Q ss_pred EEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh---CCCCEE
Q psy6053 243 HISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN---NGMPCL 319 (614)
Q Consensus 243 ~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~---~glp~~ 319 (614)
++||..+..... ....|+.||+..|.+.+..+. ..++++
T Consensus 130 ~isS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~i~vn 171 (264)
T 2dtx_A 130 NISSVQASIITK--------------------------------------NASAYVTSKHAVIGLTKSIALDYAPLLRCN 171 (264)
T ss_dssp EECCGGGTSCCT--------------------------------------TBHHHHHHHHHHHHHHHHHHHHHTTTSEEE
T ss_pred EECCchhccCCC--------------------------------------CchhHHHHHHHHHHHHHHHHHHhcCCcEEE
Confidence 999987643210 015799999999999887665 128999
Q ss_pred EeecceeecccCCCCccccCCCCchH---HHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccE
Q psy6053 320 MLRPSIIIPVWREPLPGWTDNINGPT---GLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSI 396 (614)
Q Consensus 320 IvRp~~I~g~~~~p~~gw~d~~~g~~---~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~v 396 (614)
+++||.|.++..........+ .... ........+ .....++.++|+|++++.++..... -..+++
T Consensus 172 ~v~PG~v~t~~~~~~~~~~~~-~~~~~~~~~~~~~~~~---------~p~~~~~~p~dvA~~v~~l~s~~~~--~~tG~~ 239 (264)
T 2dtx_A 172 AVCPATIDTPLVRKAAELEVG-SDPMRIEKKISEWGHE---------HPMQRIGKPQEVASAVAFLASREAS--FITGTC 239 (264)
T ss_dssp EEEECSBCSHHHHHHHHHHHC-SCHHHHHHHHHHHHHH---------STTSSCBCHHHHHHHHHHHHSGGGT--TCCSCE
T ss_pred EEEeCCCcCcchhhhhhcccc-cCchhhHHHHHHHHhc---------CCCCCCcCHHHHHHHHHHHhCchhc--CCCCcE
Confidence 999998855421000000000 0000 111111110 1113478999999999988865431 136788
Q ss_pred EEeccC
Q psy6053 397 VHLTSS 402 (614)
Q Consensus 397 yni~~~ 402 (614)
+++.++
T Consensus 240 i~vdGG 245 (264)
T 2dtx_A 240 LYVDGG 245 (264)
T ss_dssp EEESTT
T ss_pred EEECCC
Confidence 888776
No 177
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=99.73 E-value=3.1e-17 Score=165.79 Aligned_cols=217 Identities=12% Similarity=0.124 Sum_probs=148.0
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
+++|+|+||||+|+||++++++|++.|.. |++..|+. ++++++.+ + ...++.++.+|+
T Consensus 25 l~gk~vlVTGas~gIG~aia~~la~~G~~---V~~~~r~~------~~~~~~~~---------~----~~~~~~~~~~Dv 82 (266)
T 3grp_A 25 LTGRKALVTGATGGIGEAIARCFHAQGAI---VGLHGTRE------DKLKEIAA---------D----LGKDVFVFSANL 82 (266)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCE---EEEEESCH------HHHHHHHH---------H----HCSSEEEEECCT
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEeCCH------HHHHHHHH---------H----hCCceEEEEeec
Confidence 67899999999999999999999999875 78888753 33333211 0 235789999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHHc---CCCceEE
Q psy6053 180 EADELAIKESDRQLLAS-------EVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKEM---KHLELFV 242 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~V 242 (614)
++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++.+.+... .+..++|
T Consensus 83 ~d~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv 156 (266)
T 3grp_A 83 SDRK------SIKQLAEVAEREMEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRII 156 (266)
T ss_dssp TSHH------HHHHHHHHHHHHHTSCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEE
Confidence 9976 6766665 78999999997532 3567788999999976666655321 3557999
Q ss_pred EEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCCE
Q psy6053 243 HISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMPC 318 (614)
Q Consensus 243 ~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp~ 318 (614)
++||..+..... ....|+.||+..+.+.+..+. +|+++
T Consensus 157 ~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~~~~~la~e~~~~gI~v 198 (266)
T 3grp_A 157 NITSIVGVVGNP--------------------------------------GQTNYCAAKAGLIGFSKALAQEIASRNITV 198 (266)
T ss_dssp EECCC---------------------------------------------CHHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred EECCHHHcCCCC--------------------------------------CchhHHHHHHHHHHHHHHHHHHhhhhCcEE
Confidence 999986532210 015799999988777766554 58999
Q ss_pred EEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEE
Q psy6053 319 LMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVH 398 (614)
Q Consensus 319 ~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyn 398 (614)
..++||.|.++.... . . .........+ .....+...+|+|++++.++..... -..+++++
T Consensus 199 n~v~PG~v~t~~~~~-------~-~-~~~~~~~~~~---------~p~~r~~~~edvA~~v~~L~s~~~~--~itG~~i~ 258 (266)
T 3grp_A 199 NCIAPGFIKSAMTDK-------L-N-EKQKEAIMAM---------IPMKRMGIGEEIAFATVYLASDEAA--YLTGQTLH 258 (266)
T ss_dssp EEEEECSBCSHHHHT-------C-C-HHHHHHHHTT---------CTTCSCBCHHHHHHHHHHHHSGGGT--TCCSCEEE
T ss_pred EEEeeCcCCCchhhc-------c-C-HHHHHHHHhc---------CCCCCCcCHHHHHHHHHHHhCcccc--CccCCEEE
Confidence 999999987653211 0 1 1111222221 1123456789999999988865432 13688999
Q ss_pred eccC
Q psy6053 399 LTSS 402 (614)
Q Consensus 399 i~~~ 402 (614)
+.++
T Consensus 259 vdGG 262 (266)
T 3grp_A 259 INGG 262 (266)
T ss_dssp ESTT
T ss_pred ECCC
Confidence 9876
No 178
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=99.73 E-value=2.6e-17 Score=165.51 Aligned_cols=221 Identities=15% Similarity=0.091 Sum_probs=152.7
Q ss_pred CCcEEEEecccccccHHHHHHHHhhCCCccEEEEE-EccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 101 TGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYIL-MRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 101 ~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~L-vR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
++|+||||||+|+||++++++|++.|.+ |+++ .|+.. ..+.+.+.+ + . ...++.++.+|+
T Consensus 3 ~~k~vlVTGas~gIG~aia~~l~~~G~~---vv~~~~r~~~---~~~~~~~~~--------~----~-~~~~~~~~~~Dv 63 (258)
T 3oid_A 3 QNKCALVTGSSRGVGKAAAIRLAENGYN---IVINYARSKK---AALETAEEI--------E----K-LGVKVLVVKANV 63 (258)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHTTCE---EEEEESSCHH---HHHHHHHHH--------H----T-TTCCEEEEECCT
T ss_pred CCCEEEEecCCchHHHHHHHHHHHCCCE---EEEEcCCCHH---HHHHHHHHH--------H----h-cCCcEEEEEcCC
Confidence 5789999999999999999999999976 6665 56431 112221111 1 1 335789999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHHc---CCCceEE
Q psy6053 180 EADELAIKESDRQLLAS-------EVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKEM---KHLELFV 242 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~V 242 (614)
++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++.+... .+..++|
T Consensus 64 ~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv 137 (258)
T 3oid_A 64 GQPA------KIKEMFQQIDETFGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIV 137 (258)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEE
Confidence 9976 6666665 56999999985321 3557778999999999999888531 3456899
Q ss_pred EEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCCE
Q psy6053 243 HISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMPC 318 (614)
Q Consensus 243 ~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp~ 318 (614)
++||..+..... ....|+.||+..+.+.+..+. +|+++
T Consensus 138 ~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gi~v 179 (258)
T 3oid_A 138 SISSLGSIRYLE--------------------------------------NYTTVGVSKAALEALTRYLAVELSPKQIIV 179 (258)
T ss_dssp EEEEGGGTSBCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEE
T ss_pred EECchhhCCCCC--------------------------------------CcHHHHHHHHHHHHHHHHHHHHHhhcCcEE
Confidence 999986542210 015799999999998887665 58999
Q ss_pred EEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEE
Q psy6053 319 LMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVH 398 (614)
Q Consensus 319 ~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyn 398 (614)
..++||.|..+.... ............... ....+..++|+|++++.++..... -..+++++
T Consensus 180 n~v~PG~v~T~~~~~-------~~~~~~~~~~~~~~~---------p~~r~~~~~dva~~v~~L~s~~~~--~itG~~i~ 241 (258)
T 3oid_A 180 NAVSGGAIDTDALKH-------FPNREDLLEDARQNT---------PAGRMVEIKDMVDTVEFLVSSKAD--MIRGQTII 241 (258)
T ss_dssp EEEEECCBCSGGGGG-------CTTHHHHHHHHHHHC---------TTSSCBCHHHHHHHHHHHTSSTTT--TCCSCEEE
T ss_pred EEEeeCCCcChhhhh-------cccCHHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHhCcccC--CccCCEEE
Confidence 999999997654321 111112222222211 113467899999999988865432 13688999
Q ss_pred eccC
Q psy6053 399 LTSS 402 (614)
Q Consensus 399 i~~~ 402 (614)
+.+|
T Consensus 242 vdGG 245 (258)
T 3oid_A 242 VDGG 245 (258)
T ss_dssp ESTT
T ss_pred ECCC
Confidence 9887
No 179
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=99.73 E-value=1.3e-16 Score=164.14 Aligned_cols=228 Identities=14% Similarity=0.159 Sum_probs=152.9
Q ss_pred ccCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCC
Q psy6053 99 TFTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGD 178 (614)
Q Consensus 99 ~~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gD 178 (614)
.+++|+|+||||||+||++++++|++.|++ |+++.|+.. ++++..+ .++...+.....++.++.+|
T Consensus 15 ~l~~k~vlVTGasggIG~~la~~l~~~G~~---V~~~~r~~~------~~~~~~~-----~l~~~~~~~~~~~~~~~~~D 80 (303)
T 1yxm_A 15 LLQGQVAIVTGGATGIGKAIVKELLELGSN---VVIASRKLE------RLKSAAD-----ELQANLPPTKQARVIPIQCN 80 (303)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCHH------HHHHHHH-----HHHHTSCTTCCCCEEEEECC
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEeCCHH------HHHHHHH-----HHHhhccccCCccEEEEecC
Confidence 467899999999999999999999999875 888888632 2222111 11111110023578999999
Q ss_pred CCCCCCCCCHHHHHHHhc-------cccEEEEcccccC-------hhHHHHHHHHHhHHHHHHHHHHHHHc---CCCceE
Q psy6053 179 AEADELAIKESDRQLLAS-------EVDIMIHGAATIR-------FDEALKKAVLLNTRGTKMMLSLAKEM---KHLELF 241 (614)
Q Consensus 179 l~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~-------~~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~ 241 (614)
+++++ +++.+++ ++|+|||+||... ..+.++..+++|+.|+.++++++... .+..++
T Consensus 81 ~~~~~------~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~i 154 (303)
T 1yxm_A 81 IRNEE------EVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSI 154 (303)
T ss_dssp TTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEE
T ss_pred CCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeE
Confidence 99865 6766665 4899999999532 13456778999999999999998652 134689
Q ss_pred EEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCC
Q psy6053 242 VHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMP 317 (614)
Q Consensus 242 V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp 317 (614)
|++||.. .... |. ...|+.||+..+.+.+..+. .|++
T Consensus 155 v~isS~~-~~~~----------~~----------------------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~ 195 (303)
T 1yxm_A 155 VNIIVPT-KAGF----------PL----------------------------AVHSGAARAGVYNLTKSLALEWACSGIR 195 (303)
T ss_dssp EEECCCC-TTCC----------TT----------------------------CHHHHHHHHHHHHHHHHHHHHTGGGTEE
T ss_pred EEEEeec-ccCC----------Cc----------------------------chhhHHHHHHHHHHHHHHHHHhcccCeE
Confidence 9999986 2110 00 14799999988888876654 4899
Q ss_pred EEEeecceeecccC-CCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccE
Q psy6053 318 CLMLRPSIIIPVWR-EPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSI 396 (614)
Q Consensus 318 ~~IvRp~~I~g~~~-~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~v 396 (614)
++++|||.|+++.. .....+... . ...... ......+..++|+|++++.++..... ...+++
T Consensus 196 v~~v~Pg~v~t~~~~~~~~~~~~~------~----~~~~~~-----~~p~~~~~~~~dvA~~i~~l~~~~~~--~~~G~~ 258 (303)
T 1yxm_A 196 INCVAPGVIYSQTAVENYGSWGQS------F----FEGSFQ-----KIPAKRIGVPEEVSSVVCFLLSPAAS--FITGQS 258 (303)
T ss_dssp EEEEEECSBCCTGGGTTSGGGGGG------G----GTTGGG-----GSTTSSCBCTHHHHHHHHHHHSGGGT--TCCSCE
T ss_pred EEEEecCCcccchhhhhccccchH------H----HHHHHh-----cCcccCCCCHHHHHHHHHHHhCcccc--cCCCcE
Confidence 99999999998731 111110000 0 011000 00112378899999999998854331 136789
Q ss_pred EEeccC
Q psy6053 397 VHLTSS 402 (614)
Q Consensus 397 yni~~~ 402 (614)
+++.++
T Consensus 259 ~~v~gG 264 (303)
T 1yxm_A 259 VDVDGG 264 (303)
T ss_dssp EEESTT
T ss_pred EEECCC
Confidence 999887
No 180
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=99.73 E-value=1.7e-17 Score=168.15 Aligned_cols=225 Identities=11% Similarity=0.091 Sum_probs=153.7
Q ss_pred ccccccCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEE
Q psy6053 95 RIGETFTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLP 174 (614)
Q Consensus 95 ~i~~~~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~ 174 (614)
++...+++|+||||||+|+||++++++|++.|.+ |+++.|.... .+.+.+. +.. ...++..
T Consensus 21 ~m~~~l~~k~~lVTGas~GIG~aia~~la~~G~~---V~~~~r~~~~---~~~~~~~--------~~~-----~~~~~~~ 81 (270)
T 3ftp_A 21 SMDKTLDKQVAIVTGASRGIGRAIALELARRGAM---VIGTATTEAG---AEGIGAA--------FKQ-----AGLEGRG 81 (270)
T ss_dssp --CCTTTTCEEEETTCSSHHHHHHHHHHHHTTCE---EEEEESSHHH---HHHHHHH--------HHH-----HTCCCEE
T ss_pred ccccCCCCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEeCCHHH---HHHHHHH--------HHh-----cCCcEEE
Confidence 3444578999999999999999999999999875 8888886321 1222111 111 2246788
Q ss_pred EeCCCCCCCCCCCHHHHHHHhc-------cccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHHc---CC
Q psy6053 175 ISGDAEADELAIKESDRQLLAS-------EVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKEM---KH 237 (614)
Q Consensus 175 v~gDl~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~ 237 (614)
+.+|+++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++++... .+
T Consensus 82 ~~~Dv~d~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~ 155 (270)
T 3ftp_A 82 AVLNVNDAT------AVDALVESTLKEFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKAR 155 (270)
T ss_dssp EECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred EEEeCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC
Confidence 999999865 6666665 68999999996432 3567788999999999999987531 24
Q ss_pred CceEEEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----
Q psy6053 238 LELFVHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN---- 313 (614)
Q Consensus 238 ~k~~V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~---- 313 (614)
-.++|++||..+..... ....|+.||+..+.+.+..+.
T Consensus 156 ~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~l~~~la~e~~~ 197 (270)
T 3ftp_A 156 GGRIVNITSVVGSAGNP--------------------------------------GQVNYAAAKAGVAGMTRALAREIGS 197 (270)
T ss_dssp CEEEEEECCHHHHHCCT--------------------------------------TBHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred CCEEEEECchhhCCCCC--------------------------------------CchhHHHHHHHHHHHHHHHHHHHhh
Confidence 46899999986532210 015799999988777766544
Q ss_pred CCCCEEEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCC
Q psy6053 314 NGMPCLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHR 393 (614)
Q Consensus 314 ~glp~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~ 393 (614)
+|+++.+++||.|..+.... . +......... ......+...+|+|++++.++..... -..
T Consensus 198 ~gI~vn~v~PG~v~T~~~~~-------~--~~~~~~~~~~---------~~p~~r~~~pedvA~~v~~L~s~~~~--~it 257 (270)
T 3ftp_A 198 RGITVNCVAPGFIDTDMTKG-------L--PQEQQTALKT---------QIPLGRLGSPEDIAHAVAFLASPQAG--YIT 257 (270)
T ss_dssp GTEEEEEEEECSBCSHHHHH-------S--CHHHHHHHHT---------TCTTCSCBCHHHHHHHHHHHHSGGGT--TCC
T ss_pred hCeEEEEEEeCCCcCcchhh-------c--CHHHHHHHHh---------cCCCCCCCCHHHHHHHHHHHhCCCcC--Ccc
Confidence 58999999999886543211 0 0111111111 11223467899999999988854332 136
Q ss_pred ccEEEeccC
Q psy6053 394 QSIVHLTSS 402 (614)
Q Consensus 394 ~~vyni~~~ 402 (614)
++++++.++
T Consensus 258 G~~i~vdGG 266 (270)
T 3ftp_A 258 GTTLHVNGG 266 (270)
T ss_dssp SCEEEESTT
T ss_pred CcEEEECCC
Confidence 889999877
No 181
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=99.73 E-value=6.5e-17 Score=163.98 Aligned_cols=226 Identities=12% Similarity=0.087 Sum_probs=151.4
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
+++|+++||||||+||++++++|++.|++ |+++.|+. +++++..+ .++. ...++.++.+|+
T Consensus 19 l~~k~vlVTGas~gIG~aia~~l~~~G~~---V~~~~r~~------~~~~~~~~-----~~~~-----~~~~~~~~~~D~ 79 (273)
T 1ae1_A 19 LKGTTALVTGGSKGIGYAIVEELAGLGAR---VYTCSRNE------KELDECLE-----IWRE-----KGLNVEGSVCDL 79 (273)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCE---EEEEESCH------HHHHHHHH-----HHHH-----TTCCEEEEECCT
T ss_pred CCCCEEEEECCcchHHHHHHHHHHHCCCE---EEEEeCCH------HHHHHHHH-----HHHh-----cCCceEEEECCC
Confidence 56899999999999999999999999875 88888863 22222211 1111 224688999999
Q ss_pred CCCCCCCCHHHHHHHh--------ccccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHHc---CCCceE
Q psy6053 180 EADELAIKESDRQLLA--------SEVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKEM---KHLELF 241 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~--------~~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~ 241 (614)
++++ +++.++ .++|++||+||.... .+.++..+++|+.|+.++++++... .+..++
T Consensus 80 ~~~~------~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~i 153 (273)
T 1ae1_A 80 LSRT------ERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNV 153 (273)
T ss_dssp TCHH------HHHHHHHHHHHHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEE
Confidence 9865 666665 578999999997532 3567788999999999999988421 255799
Q ss_pred EEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCC
Q psy6053 242 VHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMP 317 (614)
Q Consensus 242 V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp 317 (614)
|++||..+..... ....|+.||+..|.+.+..+. .|++
T Consensus 154 v~isS~~~~~~~~--------------------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~ 195 (273)
T 1ae1_A 154 IFLSSIAGFSALP--------------------------------------SVSLYSASKGAINQMTKSLACEWAKDNIR 195 (273)
T ss_dssp EEECCGGGTSCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred EEEcCHhhcCCCC--------------------------------------CcchhHHHHHHHHHHHHHHHHHHhhcCcE
Confidence 9999987643210 015799999999988877654 5899
Q ss_pred EEEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEE
Q psy6053 318 CLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIV 397 (614)
Q Consensus 318 ~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vy 397 (614)
+++++||.|.++...... ................. + ...+...+|+|++++.++..... ...++++
T Consensus 196 v~~v~Pg~v~t~~~~~~~---~~~~~~~~~~~~~~~~~-------p--~~r~~~p~dvA~~v~~l~s~~~~--~~tG~~i 261 (273)
T 1ae1_A 196 VNSVAPGVILTPLVETAI---KKNPHQKEEIDNFIVKT-------P--MGRAGKPQEVSALIAFLCFPAAS--YITGQII 261 (273)
T ss_dssp EEEEEECSBC----------------CHHHHHHHHHHS-------T--TCSCBCHHHHHHHHHHHHSGGGT--TCCSCEE
T ss_pred EEEEEeCCCcCchhhhhh---hcccCcHHHHHHHHhcC-------C--CCCCcCHHHHHHHHHHHhCcccc--CcCCCEE
Confidence 999999999876432110 00000011111111110 0 11367899999999988754331 1367899
Q ss_pred EeccC
Q psy6053 398 HLTSS 402 (614)
Q Consensus 398 ni~~~ 402 (614)
++.++
T Consensus 262 ~vdGG 266 (273)
T 1ae1_A 262 WADGG 266 (273)
T ss_dssp EESTT
T ss_pred EECCC
Confidence 98877
No 182
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=99.73 E-value=2.5e-17 Score=164.28 Aligned_cols=221 Identities=16% Similarity=0.201 Sum_probs=149.3
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
+++|+|+||||||+||++++++|++.|++ |+++.|... +++++..+ .++. ...++.++.+|+
T Consensus 2 l~~k~vlVTGas~giG~~ia~~l~~~G~~---V~~~~r~~~-----~~~~~~~~-----~~~~-----~~~~~~~~~~D~ 63 (246)
T 2uvd_A 2 LKGKVALVTGASRGIGRAIAIDLAKQGAN---VVVNYAGNE-----QKANEVVD-----EIKK-----LGSDAIAVRADV 63 (246)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCE---EEEEESSCH-----HHHHHHHH-----HHHH-----TTCCEEEEECCT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEeCCCH-----HHHHHHHH-----HHHh-----cCCcEEEEEcCC
Confidence 46799999999999999999999999876 888888421 22222111 1111 224688999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHHc---CCCceEE
Q psy6053 180 EADELAIKESDRQLLAS-------EVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKEM---KHLELFV 242 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~V 242 (614)
++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++.+.+... .+..++|
T Consensus 64 ~~~~------~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv 137 (246)
T 2uvd_A 64 ANAE------DVTNMVKQTVDVFGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIV 137 (246)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEE
Confidence 9865 6766665 69999999996532 3567788999999977776655421 2568999
Q ss_pred EEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCCE
Q psy6053 243 HISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMPC 318 (614)
Q Consensus 243 ~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp~ 318 (614)
++||..+.... | ....|+.||+..+.+.+..+. .|+++
T Consensus 138 ~isS~~~~~~~----------~----------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v 179 (246)
T 2uvd_A 138 NIASVVGVTGN----------P----------------------------GQANYVAAKAGVIGLTKTSAKELASRNITV 179 (246)
T ss_dssp EECCTHHHHCC----------T----------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred EECCHHhcCCC----------C----------------------------CCchHHHHHHHHHHHHHHHHHHhhhcCeEE
Confidence 99998653211 0 015799999988887765543 58999
Q ss_pred EEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEE
Q psy6053 319 LMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVH 398 (614)
Q Consensus 319 ~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyn 398 (614)
++++||.|.++.....+ . .......... ....+++.+|+|++++.++..... -..+++++
T Consensus 180 ~~v~Pg~v~t~~~~~~~-------~--~~~~~~~~~~---------p~~~~~~~~dvA~~~~~l~s~~~~--~~tG~~~~ 239 (246)
T 2uvd_A 180 NAIAPGFIATDMTDVLD-------E--NIKAEMLKLI---------PAAQFGEAQDIANAVTFFASDQSK--YITGQTLN 239 (246)
T ss_dssp EEEEECSBGGGCSSCCC-------T--THHHHHHHTC---------TTCSCBCHHHHHHHHHHHHSGGGT--TCCSCEEE
T ss_pred EEEEeccccCcchhhcC-------H--HHHHHHHhcC---------CCCCCcCHHHHHHHHHHHcCchhc--CCCCCEEE
Confidence 99999999766432110 0 0111111110 012378999999999988854331 13578888
Q ss_pred eccC
Q psy6053 399 LTSS 402 (614)
Q Consensus 399 i~~~ 402 (614)
+.++
T Consensus 240 vdgG 243 (246)
T 2uvd_A 240 VDGG 243 (246)
T ss_dssp ESTT
T ss_pred ECcC
Confidence 8776
No 183
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=99.73 E-value=1.2e-16 Score=162.56 Aligned_cols=225 Identities=13% Similarity=0.122 Sum_probs=152.2
Q ss_pred ccCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCC
Q psy6053 99 TFTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGD 178 (614)
Q Consensus 99 ~~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gD 178 (614)
.+++|+|+||||+|+||++++++|++.|.+ |+++.|.. +++++..+ + ...++.++.+|
T Consensus 26 ~l~gk~vlVTGas~gIG~aia~~la~~G~~---V~~~~r~~------~~~~~~~~---------~----~~~~~~~~~~D 83 (277)
T 3gvc_A 26 DLAGKVAIVTGAGAGIGLAVARRLADEGCH---VLCADIDG------DAADAAAT---------K----IGCGAAACRVD 83 (277)
T ss_dssp -CTTCEEEETTTTSTHHHHHHHHHHHTTCE---EEEEESSH------HHHHHHHH---------H----HCSSCEEEECC
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEeCCH------HHHHHHHH---------H----cCCcceEEEec
Confidence 367899999999999999999999999875 88888863 22322211 0 22468899999
Q ss_pred CCCCCCCCCHHHHHHHhc-------cccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHHc---CCCceE
Q psy6053 179 AEADELAIKESDRQLLAS-------EVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKEM---KHLELF 241 (614)
Q Consensus 179 l~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~ 241 (614)
+++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++.+... .+..++
T Consensus 84 v~d~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~I 157 (277)
T 3gvc_A 84 VSDEQ------QIIAMVDACVAAFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAI 157 (277)
T ss_dssp TTCHH------HHHHHHHHHHHHHSSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred CCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEE
Confidence 99876 6666554 68999999997532 3567788999999999998887542 345689
Q ss_pred EEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCC
Q psy6053 242 VHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMP 317 (614)
Q Consensus 242 V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp 317 (614)
|++||..+..... ....|+.||+..|.+.+..+. +|++
T Consensus 158 v~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~ 199 (277)
T 3gvc_A 158 VNLSSLAGQVAVG--------------------------------------GTGAYGMSKAGIIQLSRITAAELRSSGIR 199 (277)
T ss_dssp EEECCGGGTSCCT--------------------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred EEEcchhhccCCC--------------------------------------CchhHHHHHHHHHHHHHHHHHHhcccCeE
Confidence 9999986532210 015799999999988876543 5899
Q ss_pred EEEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEE
Q psy6053 318 CLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIV 397 (614)
Q Consensus 318 ~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vy 397 (614)
+.+++||.|.++....... ...+ . .......... ......+..++|+|++++.++..... -..++++
T Consensus 200 vn~v~PG~v~t~~~~~~~~---~~~~--~----~~~~~~~~~~--~~~~~r~~~pedvA~~v~~L~s~~a~--~itG~~i 266 (277)
T 3gvc_A 200 SNTLLPAFVDTPMQQTAMA---MFDG--A----LGAGGARSMI--ARLQGRMAAPEEMAGIVVFLLSDDAS--MITGTTQ 266 (277)
T ss_dssp EEEEEECSBCCHHHHHHHT---CC------------CCHHHHH--HHHHSSCBCHHHHHHHHHHHHSGGGT--TCCSCEE
T ss_pred EEEEeeCCccCchHHHhhh---cchh--h----HHHHhhhhhh--hccccCCCCHHHHHHHHHHHcCCccC--CccCcEE
Confidence 9999999997653210000 0000 0 0000000000 00112467899999999998865432 1368899
Q ss_pred EeccC
Q psy6053 398 HLTSS 402 (614)
Q Consensus 398 ni~~~ 402 (614)
++.+|
T Consensus 267 ~vdGG 271 (277)
T 3gvc_A 267 IADGG 271 (277)
T ss_dssp EESTT
T ss_pred EECCc
Confidence 99887
No 184
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=99.73 E-value=1.4e-16 Score=160.59 Aligned_cols=223 Identities=9% Similarity=0.044 Sum_probs=156.8
Q ss_pred cCCcEEEEeccccc--ccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeC
Q psy6053 100 FTGKTLFMTGASGF--LGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISG 177 (614)
Q Consensus 100 ~~~~~VLITGaTGF--lG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~g 177 (614)
+++|+|+||||+|+ ||++++++|++.|.+ |+++.|..+. .+.++++.+. . ...++.++.+
T Consensus 5 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~---V~~~~r~~~~---~~~~~~~~~~---------~---~~~~~~~~~~ 66 (266)
T 3oig_A 5 LEGRNIVVMGVANKRSIAWGIARSLHEAGAR---LIFTYAGERL---EKSVHELAGT---------L---DRNDSIILPC 66 (266)
T ss_dssp CTTCEEEEECCCSTTSHHHHHHHHHHHTTCE---EEEEESSGGG---HHHHHHHHHT---------S---SSCCCEEEEC
T ss_pred cCCCEEEEEcCCCCCcHHHHHHHHHHHCCCE---EEEecCchHH---HHHHHHHHHh---------c---CCCCceEEeC
Confidence 56899999999999 999999999999876 8888887432 3334433221 1 1137899999
Q ss_pred CCCCCCCCCCHHHHHHHhc-------cccEEEEcccccC-----------hhHHHHHHHHHhHHHHHHHHHHHHHc-CCC
Q psy6053 178 DAEADELAIKESDRQLLAS-------EVDIMIHGAATIR-----------FDEALKKAVLLNTRGTKMMLSLAKEM-KHL 238 (614)
Q Consensus 178 Dl~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~-----------~~~~~~~~~~~Nv~gt~~ll~la~~~-~~~ 238 (614)
|+++++ +++.+++ .+|++||+||... -.+.+...+++|+.|+.++++.+... .+-
T Consensus 67 D~~~~~------~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 140 (266)
T 3oig_A 67 DVTNDA------EIETCFASIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEG 140 (266)
T ss_dssp CCSSSH------HHHHHHHHHHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTC
T ss_pred CCCCHH------HHHHHHHHHHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCC
Confidence 999976 6666654 6899999999653 13456778999999999999998763 223
Q ss_pred ceEEEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----C
Q psy6053 239 ELFVHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----N 314 (614)
Q Consensus 239 k~~V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~ 314 (614)
.++|++||..+.... | ....|+.||+..+.+.+..+. .
T Consensus 141 g~iv~isS~~~~~~~----------~----------------------------~~~~Y~asKaa~~~~~~~la~e~~~~ 182 (266)
T 3oig_A 141 GSIVTLTYLGGELVM----------P----------------------------NYNVMGVAKASLDASVKYLAADLGKE 182 (266)
T ss_dssp EEEEEEECGGGTSCC----------T----------------------------TTHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred ceEEEEecccccccC----------C----------------------------CcchhHHHHHHHHHHHHHHHHHHhhc
Confidence 589999998654221 0 015799999999988877654 5
Q ss_pred CCCEEEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCc
Q psy6053 315 GMPCLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQ 394 (614)
Q Consensus 315 glp~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~ 394 (614)
|+++..++||.|..+..... .............. ....+...+|+|++++.++..... ...+
T Consensus 183 gi~v~~v~PG~v~T~~~~~~-------~~~~~~~~~~~~~~---------~~~~~~~p~dva~~v~~l~s~~~~--~~tG 244 (266)
T 3oig_A 183 NIRVNSISAGPIRTLSAKGI-------SDFNSILKDIEERA---------PLRRTTTPEEVGDTAAFLFSDMSR--GITG 244 (266)
T ss_dssp TEEEEEEEECCCCSGGGTTC-------TTHHHHHHHHHHHS---------TTSSCCCHHHHHHHHHHHHSGGGT--TCCS
T ss_pred CcEEEEEecCcccccccccc-------cchHHHHHHHHhcC---------CCCCCCCHHHHHHHHHHHcCCchh--cCcC
Confidence 89999999999977543221 11112222222111 112356889999999998875432 2368
Q ss_pred cEEEeccC
Q psy6053 395 SIVHLTSS 402 (614)
Q Consensus 395 ~vyni~~~ 402 (614)
+++++.+|
T Consensus 245 ~~i~vdGG 252 (266)
T 3oig_A 245 ENLHVDSG 252 (266)
T ss_dssp CEEEESTT
T ss_pred CEEEECCC
Confidence 89999877
No 185
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=99.73 E-value=6.9e-17 Score=167.62 Aligned_cols=219 Identities=20% Similarity=0.172 Sum_probs=138.8
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
+++|+||||||||+||++++++|++.|++ |++.+|+.. ++++..+ .+.... ...++.++.+|+
T Consensus 6 l~~k~vlVTGas~gIG~~la~~l~~~G~~---Vv~~~r~~~------~~~~~~~-----~l~~~~---~~~~~~~~~~Dl 68 (319)
T 3ioy_A 6 FAGRTAFVTGGANGVGIGLVRQLLNQGCK---VAIADIRQD------SIDKALA-----TLEAEG---SGPEVMGVQLDV 68 (319)
T ss_dssp CTTCEEEEETTTSTHHHHHHHHHHHTTCE---EEEEESCHH------HHHHHHH-----HHHHHT---CGGGEEEEECCT
T ss_pred CCCCEEEEcCCchHHHHHHHHHHHHCCCE---EEEEECCHH------HHHHHHH-----HHHhcC---CCCeEEEEECCC
Confidence 56899999999999999999999999876 888998742 2222211 111111 123789999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHHcC---------
Q psy6053 180 EADELAIKESDRQLLAS-------EVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKEMK--------- 236 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~~--------- 236 (614)
++++ +++.+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+...-
T Consensus 69 ~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~ 142 (319)
T 3ioy_A 69 ASRE------GFKMAADEVEARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQ 142 (319)
T ss_dssp TCHH------HHHHHHHHHHHHTCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSC
T ss_pred CCHH------HHHHHHHHHHHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCC
Confidence 9866 6766665 57999999996421 35677889999999999999887631
Q ss_pred CCceEEEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHH----HHHHHHHHHh
Q psy6053 237 HLELFVHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKC----LSEGLVVEAM 312 (614)
Q Consensus 237 ~~k~~V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~----~aE~lv~~~~ 312 (614)
+-.++|++||..+..... ....|+.||+ ++|.+..++.
T Consensus 143 ~~g~iV~isS~a~~~~~~--------------------------------------~~~~Y~aSKaal~~~~~~la~e~~ 184 (319)
T 3ioy_A 143 KGGHVVNTASMAAFLAAG--------------------------------------SPGIYNTTKFAVRGLSESLHYSLL 184 (319)
T ss_dssp CCCEEEEECCGGGTCCCS--------------------------------------SSHHHHHHHHHHHHHHHHHHHHHG
T ss_pred CCcEEEEecccccccCCC--------------------------------------CCHHHHHHHHHHHHHHHHHHHHhh
Confidence 234699999987643210 1257999999 5666655555
Q ss_pred hCCCCEEEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeC-CCccccceeHHHHHHHHHHHHHhh
Q psy6053 313 NNGMPCLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCD-NTGYADFLPVDITINGIFVAIWAY 386 (614)
Q Consensus 313 ~~glp~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~-~~~~~d~vpVDdva~aii~~~~~~ 386 (614)
..|+.+++++||.|.++...+.. ..+ ..+.............. .......++++++|++++.++...
T Consensus 185 ~~gi~v~~v~PG~v~T~~~~~~~------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~vA~~~~~al~~~ 252 (319)
T 3ioy_A 185 KYEIGVSVLCPGLVKSYIYASDD------IRP-DALKGEVKPVDKTAVERLAGVHEFGMEPDVIGARVIEAMKAN 252 (319)
T ss_dssp GGTCEEEEECCCCBC------------------------------------CCGGGSSBCHHHHHHHHHHHHHTT
T ss_pred hcCCEEEEEEcCeEccCcccccc------cCc-hhhcccccchhHHHHHHHHHhhhcCCCHHHHHHHHHHHHHcC
Confidence 56999999999999765432110 000 00000000000000011 111112279999999999998653
No 186
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=99.73 E-value=6.3e-18 Score=170.78 Aligned_cols=235 Identities=17% Similarity=0.190 Sum_probs=152.8
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
+++|+|+||||||+||++++++|++.|++ |+++.|+... .+.+.+. +.... ...++.++.+|+
T Consensus 5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~---V~~~~r~~~~---~~~~~~~--------l~~~~---~~~~~~~~~~D~ 67 (267)
T 2gdz_A 5 VNGKVALVTGAAQGIGRAFAEALLLKGAK---VALVDWNLEA---GVQCKAA--------LHEQF---EPQKTLFIQCDV 67 (267)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCHHH---HHHHHHH--------HTTTS---CGGGEEEEECCT
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHCCCE---EEEEECCHHH---HHHHHHH--------HHhhc---CCCceEEEecCC
Confidence 56889999999999999999999999876 8888886321 1111111 11110 124688999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcccccChhHHHHHHHHHhHHHHHHHHHH----HHHcC--CCceEEEEeC
Q psy6053 180 EADELAIKESDRQLLAS-------EVDIMIHGAATIRFDEALKKAVLLNTRGTKMMLSL----AKEMK--HLELFVHIST 246 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~l----a~~~~--~~k~~V~vST 246 (614)
++++ +++.+++ ++|++||+||... .+.++..+++|+.|+..+.+. +++.+ +..++|++||
T Consensus 68 ~~~~------~v~~~~~~~~~~~g~id~lv~~Ag~~~-~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS 140 (267)
T 2gdz_A 68 ADQQ------QLRDTFRKVVDHFGRLDILVNNAGVNN-EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSS 140 (267)
T ss_dssp TSHH------HHHHHHHHHHHHHSCCCEEEECCCCCC-SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECC
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCC-hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCC
Confidence 9865 6666665 4799999999764 345677889999976655544 43321 1578999999
Q ss_pred ceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHH------hhCCCCEEE
Q psy6053 247 AYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEA------MNNGMPCLM 320 (614)
Q Consensus 247 ~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~------~~~glp~~I 320 (614)
..+..... ....|+.||+..|.+.+.. ...|+++++
T Consensus 141 ~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~~~~ala~e~~~~gi~v~~ 182 (267)
T 2gdz_A 141 LAGLMPVA--------------------------------------QQPVYCASKHGIVGFTRSAALAANLMNSGVRLNA 182 (267)
T ss_dssp GGGTSCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred ccccCCCC--------------------------------------CCchHHHHHHHHHHHHHHHHHHHHhccCCcEEEE
Confidence 97643210 0147999999999988763 126899999
Q ss_pred eecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEec
Q psy6053 321 LRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLT 400 (614)
Q Consensus 321 vRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~ 400 (614)
++||.|.++.... ...... .... ......+ ..+.....+++++|+|++++.++.... ..++++++.
T Consensus 183 v~Pg~v~t~~~~~-------~~~~~~-~~~~-~~~~~~~-~~~~~~~~~~~~~dvA~~v~~l~s~~~----~~G~~~~v~ 248 (267)
T 2gdz_A 183 ICPGFVNTAILES-------IEKEEN-MGQY-IEYKDHI-KDMIKYYGILDPPLIANGLITLIEDDA----LNGAIMKIT 248 (267)
T ss_dssp EEESCBSSHHHHG-------GGCHHH-HGGG-GGGHHHH-HHHHHHHCCBCHHHHHHHHHHHHHCTT----CSSCEEEEE
T ss_pred EecCcCcchhhhc-------cccccc-cchh-hhHHHHH-HHHhccccCCCHHHHHHHHHHHhcCcC----CCCcEEEec
Confidence 9999986653110 000000 0000 0000000 000012346799999999999887653 378899999
Q ss_pred cCCcccccHHHH
Q psy6053 401 SSQEWQVSWQEI 412 (614)
Q Consensus 401 ~~~~~~it~~e~ 412 (614)
++ +++++.|+
T Consensus 249 gg--~~~~~~~~ 258 (267)
T 2gdz_A 249 TS--KGIHFQDY 258 (267)
T ss_dssp TT--TEEEECCC
T ss_pred CC--CcccccCc
Confidence 88 67776654
No 187
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=99.73 E-value=1.6e-16 Score=160.41 Aligned_cols=229 Identities=14% Similarity=0.100 Sum_probs=150.5
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
+++|+|+||||||+||++++++|++.|++ |+++.|+.. ++++..+ .+....+ ..++.++.+|+
T Consensus 11 l~~k~vlVTGas~gIG~~ia~~l~~~G~~---V~~~~r~~~------~~~~~~~-----~~~~~~~---~~~~~~~~~D~ 73 (267)
T 1iy8_A 11 FTDRVVLITGGGSGLGRATAVRLAAEGAK---LSLVDVSSE------GLEASKA-----AVLETAP---DAEVLTTVADV 73 (267)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCHH------HHHHHHH-----HHHHHCT---TCCEEEEECCT
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEeCCHH------HHHHHHH-----HHHhhcC---CceEEEEEccC
Confidence 57899999999999999999999999875 888888642 2222111 1111111 25788999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcccccCh--------hHHHHHHHHHhHHHHHHHHHHH----HHcCCCce
Q psy6053 180 EADELAIKESDRQLLAS-------EVDIMIHGAATIRF--------DEALKKAVLLNTRGTKMMLSLA----KEMKHLEL 240 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~--------~~~~~~~~~~Nv~gt~~ll~la----~~~~~~k~ 240 (614)
++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+..+.+.+ ++ .+..+
T Consensus 74 ~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~-~~~g~ 146 (267)
T 1iy8_A 74 SDEA------QVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMRE-QGSGM 146 (267)
T ss_dssp TSHH------HHHHHHHHHHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-HTCCE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH-cCCCE
Confidence 9865 6666665 68999999996532 2567788999999988766554 33 25679
Q ss_pred EEEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCC
Q psy6053 241 FVHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGM 316 (614)
Q Consensus 241 ~V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~gl 316 (614)
+|++||..+..... ....|+.||+..+.+.+..+. .|+
T Consensus 147 iv~isS~~~~~~~~--------------------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi 188 (267)
T 1iy8_A 147 VVNTASVGGIRGIG--------------------------------------NQSGYAAAKHGVVGLTRNSAVEYGRYGI 188 (267)
T ss_dssp EEEECCGGGTSBCS--------------------------------------SBHHHHHHHHHHHHHHHHHHHHHGGGTC
T ss_pred EEEEcchhhccCCC--------------------------------------CCccHHHHHHHHHHHHHHHHHHHHhcCe
Confidence 99999986532210 015799999999988876554 589
Q ss_pred CEEEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccE
Q psy6053 317 PCLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSI 396 (614)
Q Consensus 317 p~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~v 396 (614)
++++++||.|.++...... .................. .....+...+|+|++++.++..... -..+.+
T Consensus 189 ~v~~v~PG~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~---------~p~~r~~~~~dvA~~v~~l~s~~~~--~~tG~~ 256 (267)
T 1iy8_A 189 RINAIAPGAIWTPMVENSM-KQLDPENPRKAAEEFIQV---------NPSKRYGEAPEIAAVVAFLLSDDAS--YVNATV 256 (267)
T ss_dssp EEEEEEECSBCSHHHHHHH-HHHCTTCHHHHHHHHHTT---------CTTCSCBCHHHHHHHHHHHTSGGGT--TCCSCE
T ss_pred EEEEEEeCCCcCcchhccc-cccChhhhhhHHHHHhcc---------CCCCCCcCHHHHHHHHHHHcCcccc--CCCCCE
Confidence 9999999998765311000 000000000000011111 0112367899999999988754421 136788
Q ss_pred EEeccC
Q psy6053 397 VHLTSS 402 (614)
Q Consensus 397 yni~~~ 402 (614)
+++.++
T Consensus 257 i~vdGG 262 (267)
T 1iy8_A 257 VPIDGG 262 (267)
T ss_dssp EEESTT
T ss_pred EEECCC
Confidence 988877
No 188
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2
Probab=99.72 E-value=6.9e-17 Score=161.54 Aligned_cols=213 Identities=13% Similarity=0.059 Sum_probs=143.8
Q ss_pred ccccccCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEE
Q psy6053 95 RIGETFTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLP 174 (614)
Q Consensus 95 ~i~~~~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~ 174 (614)
+....+++|+|+||||||+||++++++|++.|.+ |+++.|+. +.+++ . .++.+
T Consensus 12 ~~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~---V~~~~r~~------~~~~~-----------------~-~~~~~ 64 (249)
T 1o5i_A 12 HMELGIRDKGVLVLAASRGIGRAVADVLSQEGAE---VTICARNE------ELLKR-----------------S-GHRYV 64 (249)
T ss_dssp ----CCTTCEEEEESCSSHHHHHHHHHHHHTTCE---EEEEESCH------HHHHH-----------------T-CSEEE
T ss_pred hHHhccCCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEcCCH------HHHHh-----------------h-CCeEE
Confidence 4455678999999999999999999999999875 88888864 11211 1 24667
Q ss_pred EeCCCCCCCCCCCHHHHHHHh---ccccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHH----HHHcCCCce
Q psy6053 175 ISGDAEADELAIKESDRQLLA---SEVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSL----AKEMKHLEL 240 (614)
Q Consensus 175 v~gDl~~~~lGLs~~~~~~l~---~~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~l----a~~~~~~k~ 240 (614)
+ +|+ . + +.+.++ .++|+|||+||.... .+.++..+++|+.|+.++.+. +++ .+..+
T Consensus 65 ~-~D~-~-~------~~~~~~~~~~~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~-~~~g~ 134 (249)
T 1o5i_A 65 V-CDL-R-K------DLDLLFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKE-KGWGR 134 (249)
T ss_dssp E-CCT-T-T------CHHHHHHHSCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-HTCEE
T ss_pred E-eeH-H-H------HHHHHHHHhcCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH-cCCcE
Confidence 7 999 2 2 344443 379999999996432 355778899999997766544 444 35689
Q ss_pred EEEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCC
Q psy6053 241 FVHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGM 316 (614)
Q Consensus 241 ~V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~gl 316 (614)
+|++||..+..... ....|+.||+..+.+.+..+. .|+
T Consensus 135 iv~isS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi 176 (249)
T 1o5i_A 135 IVAITSFSVISPIE--------------------------------------NLYTSNSARMALTGFLKTLSFEVAPYGI 176 (249)
T ss_dssp EEEECCGGGTSCCT--------------------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTE
T ss_pred EEEEcchHhcCCCC--------------------------------------CCchHHHHHHHHHHHHHHHHHHhhhcCe
Confidence 99999997643210 015799999999988876554 589
Q ss_pred CEEEeecceeecccCCCCccccCCCCchHHHHH-HHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCcc
Q psy6053 317 PCLMLRPSIIIPVWREPLPGWTDNINGPTGLLI-GAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQS 395 (614)
Q Consensus 317 p~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~-~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~ 395 (614)
+++++|||.|.++.... + . + .... ..... .....+.+++|+|++++.++..... ...++
T Consensus 177 ~v~~v~Pg~v~t~~~~~---~----~-~-~~~~~~~~~~---------~p~~~~~~~~dvA~~i~~l~s~~~~--~~tG~ 236 (249)
T 1o5i_A 177 TVNCVAPGWTETERVKE---L----L-S-EEKKKQVESQ---------IPMRRMAKPEEIASVVAFLCSEKAS--YLTGQ 236 (249)
T ss_dssp EEEEEEECSBCCTTHHH---H----S-C-HHHHHHHHTT---------STTSSCBCHHHHHHHHHHHHSGGGT--TCCSC
T ss_pred EEEEEeeCCCccCcccc---c----c-h-hhHHHHHHhc---------CCCCCCcCHHHHHHHHHHHcCcccc--CCCCC
Confidence 99999999997753210 0 0 0 1111 11111 1113477999999999988865432 13578
Q ss_pred EEEeccC
Q psy6053 396 IVHLTSS 402 (614)
Q Consensus 396 vyni~~~ 402 (614)
++++.++
T Consensus 237 ~~~vdgG 243 (249)
T 1o5i_A 237 TIVVDGG 243 (249)
T ss_dssp EEEESTT
T ss_pred EEEECCC
Confidence 9999877
No 189
>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}
Probab=99.72 E-value=8e-17 Score=161.75 Aligned_cols=213 Identities=15% Similarity=0.135 Sum_probs=147.9
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
+++|++|||||||+||++++++|++.|.+ |+++.|... + ..+. ...++.++.+|+
T Consensus 7 l~~k~vlVTGas~gIG~aia~~l~~~G~~---V~~~~r~~~-----~-~~~~----------------~~~~~~~~~~D~ 61 (257)
T 3tl3_A 7 IRDAVAVVTGGASGLGLATTKRLLDAGAQ---VVVLDIRGE-----D-VVAD----------------LGDRARFAAADV 61 (257)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHHHTCE---EEEEESSCH-----H-HHHH----------------TCTTEEEEECCT
T ss_pred ecCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEeCchH-----H-HHHh----------------cCCceEEEECCC
Confidence 56899999999999999999999999976 888888421 1 1111 335789999999
Q ss_pred CCCCCCCCHHHHHHHhc------cccEEEEcccccCh-----------hHHHHHHHHHhHHHHHHHHHHHHHc-------
Q psy6053 180 EADELAIKESDRQLLAS------EVDIMIHGAATIRF-----------DEALKKAVLLNTRGTKMMLSLAKEM------- 235 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~------~vd~ViH~AA~v~~-----------~~~~~~~~~~Nv~gt~~ll~la~~~------- 235 (614)
++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++++...
T Consensus 62 ~~~~------~v~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~ 135 (257)
T 3tl3_A 62 TDEA------AVASALDLAETMGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPV 135 (257)
T ss_dssp TCHH------HHHHHHHHHHHHSCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC
T ss_pred CCHH------HHHHHHHHHHHhCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhccc
Confidence 9876 6666665 79999999996431 3456788999999999999988762
Q ss_pred ----CCCceEEEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHH
Q psy6053 236 ----KHLELFVHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEA 311 (614)
Q Consensus 236 ----~~~k~~V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~ 311 (614)
.+-.++|++||..+..... + ...|+.||+..+.+.+..
T Consensus 136 ~~~~~~~g~iv~isS~~~~~~~~--------------------------------~------~~~Y~asKaa~~~~~~~l 177 (257)
T 3tl3_A 136 GPNAEERGVIINTASVAAFDGQI--------------------------------G------QAAYSASKGGVVGMTLPI 177 (257)
T ss_dssp --CCCCSEEEEEECCCC--CCHH--------------------------------H------HHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCcEEEEEcchhhcCCCC--------------------------------C------CccHHHHHHHHHHHHHHH
Confidence 1234799999987642210 0 147999999888777665
Q ss_pred hh----CCCCEEEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhh
Q psy6053 312 MN----NGMPCLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYL 387 (614)
Q Consensus 312 ~~----~glp~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~ 387 (614)
+. +|+.+..++||.|..+.... . +............ ....+...+|+|++++.++....
T Consensus 178 a~e~~~~gI~vn~v~PG~v~T~~~~~-------~--~~~~~~~~~~~~~--------~~~r~~~p~dva~~v~~l~s~~~ 240 (257)
T 3tl3_A 178 ARDLASHRIRVMTIAPGLFDTPLLAS-------L--PEEARASLGKQVP--------HPSRLGNPDEYGALAVHIIENPM 240 (257)
T ss_dssp HHHHGGGTEEEEEEEECSBCCTTC------------CHHHHHHHHHTSS--------SSCSCBCHHHHHHHHHHHHHCTT
T ss_pred HHHhcccCcEEEEEEecCccChhhhh-------c--cHHHHHHHHhcCC--------CCCCccCHHHHHHHHHHHhcCCC
Confidence 44 58999999999986653221 1 1111122222110 11246788999999999987633
Q ss_pred hcCCCCccEEEeccC
Q psy6053 388 SQKEHRQSIVHLTSS 402 (614)
Q Consensus 388 ~~~~~~~~vyni~~~ 402 (614)
..++++++.++
T Consensus 241 ----itG~~i~vdGG 251 (257)
T 3tl3_A 241 ----LNGEVIRLDGA 251 (257)
T ss_dssp ----CCSCEEEESTT
T ss_pred ----CCCCEEEECCC
Confidence 37889999887
No 190
>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}
Probab=99.72 E-value=5e-17 Score=164.24 Aligned_cols=215 Identities=15% Similarity=0.138 Sum_probs=150.0
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
+++|+|+||||+|+||++++++|++.|.+ |++..|..... .....+.+|+
T Consensus 26 l~gk~vlVTGas~gIG~aia~~la~~G~~---V~~~~r~~~~~---------------------------~~~~~~~~Dv 75 (266)
T 3uxy_A 26 FEGKVALVTGAAGGIGGAVVTALRAAGAR---VAVADRAVAGI---------------------------AADLHLPGDL 75 (266)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCE---EEECSSCCTTS---------------------------CCSEECCCCT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEeCCHHHH---------------------------HhhhccCcCC
Confidence 57899999999999999999999999875 88888865431 1124458899
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHH----HHcCCCceE
Q psy6053 180 EADELAIKESDRQLLAS-------EVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLA----KEMKHLELF 241 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la----~~~~~~k~~ 241 (614)
++++ +.+.+++ ++|++||+||.... .+.++..+++|+.|+.++++++ ++ .+..++
T Consensus 76 ~~~~------~~~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~-~~~g~i 148 (266)
T 3uxy_A 76 REAA------YADGLPGAVAAGLGRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAA-AGGGAI 148 (266)
T ss_dssp TSHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-HTCEEE
T ss_pred CCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-cCCcEE
Confidence 9865 5554443 68999999997542 3567788999999999999988 34 256799
Q ss_pred EEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCC
Q psy6053 242 VHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMP 317 (614)
Q Consensus 242 V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp 317 (614)
|++||..+..... ....|+.||+..|.+.+..+. +|++
T Consensus 149 v~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~ 190 (266)
T 3uxy_A 149 VNVASCWGLRPGP--------------------------------------GHALYCLTKAALASLTQCMGMDHAPQGIR 190 (266)
T ss_dssp EEECCSBTTBCCT--------------------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred EEECCHHhCCCCC--------------------------------------CChHHHHHHHHHHHHHHHHHHHhhhcCcE
Confidence 9999987643210 015799999999988877654 5899
Q ss_pred EEEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEE
Q psy6053 318 CLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIV 397 (614)
Q Consensus 318 ~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vy 397 (614)
+.+++||.|.++..... +......+......... ......+..++|+|++++.++..... -..++++
T Consensus 191 vn~v~PG~v~T~~~~~~--~~~~~~~~~~~~~~~~~---------~~p~~r~~~pedvA~~v~~L~s~~~~--~itG~~i 257 (266)
T 3uxy_A 191 INAVCPNEVNTPMLRTG--FAKRGFDPDRAVAELGR---------TVPLGRIAEPEDIADVVLFLASDAAR--YLCGSLV 257 (266)
T ss_dssp EEEEEESSBCCHHHHHH--HHHTTCCHHHHHHHHHT---------TSTTSSCBCHHHHHHHHHHHHSGGGT--TCCSCEE
T ss_pred EEEEeeCCCcchHhhhh--hhcccccchHHHHHHHh---------cCCCCCCcCHHHHHHHHHHHhCchhc--CCcCCEE
Confidence 99999999876532100 00000011111112221 12234567899999999988865432 1368899
Q ss_pred EeccC
Q psy6053 398 HLTSS 402 (614)
Q Consensus 398 ni~~~ 402 (614)
++.++
T Consensus 258 ~vdGG 262 (266)
T 3uxy_A 258 EVNGG 262 (266)
T ss_dssp EESTT
T ss_pred EECcC
Confidence 99887
No 191
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=99.72 E-value=1.2e-16 Score=159.65 Aligned_cols=217 Identities=13% Similarity=0.098 Sum_probs=152.0
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
+++|+++||||+|+||++++++|++.|.+ |++..|+. +++++..+ + ...++..+.+|+
T Consensus 7 l~gk~~lVTGas~gIG~a~a~~l~~~G~~---V~~~~r~~------~~~~~~~~---------~----~~~~~~~~~~Dv 64 (248)
T 3op4_A 7 LEGKVALVTGASRGIGKAIAELLAERGAK---VIGTATSE------SGAQAISD---------Y----LGDNGKGMALNV 64 (248)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHTTCE---EEEEESSH------HHHHHHHH---------H----HGGGEEEEECCT
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEeCCH------HHHHHHHH---------H----hcccceEEEEeC
Confidence 56899999999999999999999999876 88888863 22222211 0 123577899999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHHc---CCCceEE
Q psy6053 180 EADELAIKESDRQLLAS-------EVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKEM---KHLELFV 242 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~V 242 (614)
++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++.+... .+..++|
T Consensus 65 ~d~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv 138 (248)
T 3op4_A 65 TNPE------SIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRII 138 (248)
T ss_dssp TCHH------HHHHHHHHHHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEE
Confidence 9876 6776665 78999999997532 3567788999999999999887541 2457899
Q ss_pred EEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCCE
Q psy6053 243 HISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMPC 318 (614)
Q Consensus 243 ~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp~ 318 (614)
++||..+..... ....|+.||+..+.+.+..+. +|+++
T Consensus 139 ~isS~~~~~~~~--------------------------------------~~~~Y~asK~a~~~l~~~la~e~~~~gi~v 180 (248)
T 3op4_A 139 NVGSVVGTMGNA--------------------------------------GQANYAAAKAGVIGFTKSMAREVASRGVTV 180 (248)
T ss_dssp EECCHHHHHCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred EEcchhhcCCCC--------------------------------------CChHHHHHHHHHHHHHHHHHHHHHHhCeEE
Confidence 999986532210 015799999977777766544 58999
Q ss_pred EEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEE
Q psy6053 319 LMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVH 398 (614)
Q Consensus 319 ~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyn 398 (614)
..++||.|..+..... .+ ........+ .....+..++|+|++++.++..... -..+++++
T Consensus 181 n~v~PG~v~T~~~~~~--------~~-~~~~~~~~~---------~p~~r~~~p~dva~~v~~L~s~~~~--~itG~~i~ 240 (248)
T 3op4_A 181 NTVAPGFIETDMTKAL--------ND-EQRTATLAQ---------VPAGRLGDPREIASAVAFLASPEAA--YITGETLH 240 (248)
T ss_dssp EEEEECSBSSTTTTTS--------CH-HHHHHHHHT---------CTTCSCBCHHHHHHHHHHHHSGGGT--TCCSCEEE
T ss_pred EEEeeCCCCCchhhhc--------CH-HHHHHHHhc---------CCCCCCcCHHHHHHHHHHHcCCccC--CccCcEEE
Confidence 9999998865533211 11 111111111 1123467899999999988865432 13688999
Q ss_pred eccC
Q psy6053 399 LTSS 402 (614)
Q Consensus 399 i~~~ 402 (614)
+.++
T Consensus 241 vdgG 244 (248)
T 3op4_A 241 VNGG 244 (248)
T ss_dssp ESTT
T ss_pred ECCC
Confidence 9876
No 192
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=99.72 E-value=6.5e-17 Score=164.30 Aligned_cols=221 Identities=16% Similarity=0.129 Sum_probs=154.4
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
+++|+||||||+|+||++++++|++.|.+ |+++.|+.... +.+.+.+ . . ...++.++.+|+
T Consensus 30 l~gk~~lVTGas~GIG~aia~~la~~G~~---V~~~~r~~~~~---~~~~~~~--------~----~-~~~~~~~~~~Dl 90 (276)
T 3r1i_A 30 LSGKRALITGASTGIGKKVALAYAEAGAQ---VAVAARHSDAL---QVVADEI--------A----G-VGGKALPIRCDV 90 (276)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCE---EEEEESSGGGG---HHHHHHH--------H----H-TTCCCEEEECCT
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEeCCHHHH---HHHHHHH--------H----h-cCCeEEEEEcCC
Confidence 57899999999999999999999999875 88899965321 2222111 1 1 335788999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHHc----CCCceE
Q psy6053 180 EADELAIKESDRQLLAS-------EVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKEM----KHLELF 241 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~----~~~k~~ 241 (614)
++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++++... +.-.++
T Consensus 91 ~d~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~i 164 (276)
T 3r1i_A 91 TQPD------QVRGMLDQMTGELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTI 164 (276)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEE
Confidence 9976 6777665 78999999997542 3567788999999999999887652 113679
Q ss_pred EEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCC
Q psy6053 242 VHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMP 317 (614)
Q Consensus 242 V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp 317 (614)
|++||..+..... +.+ ...|+.||+..+.+.+..+. +|++
T Consensus 165 v~isS~~~~~~~~-------~~~-----------------------------~~~Y~asKaa~~~l~~~la~e~~~~gIr 208 (276)
T 3r1i_A 165 ITTASMSGHIINI-------PQQ-----------------------------VSHYCTSKAAVVHLTKAMAVELAPHQIR 208 (276)
T ss_dssp EEECCGGGTSCCC-------SSC-----------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred EEECchHhcccCC-------CCC-----------------------------cchHHHHHHHHHHHHHHHHHHHhhcCcE
Confidence 9999986542210 000 14799999999988877654 5899
Q ss_pred EEEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEE
Q psy6053 318 CLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIV 397 (614)
Q Consensus 318 ~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vy 397 (614)
+..++||.|..+...+.+. ......... ....+...+|+|++++.++..... -..++++
T Consensus 209 vn~v~PG~v~T~~~~~~~~----------~~~~~~~~~---------p~~r~~~pedvA~~v~fL~s~~~~--~itG~~i 267 (276)
T 3r1i_A 209 VNSVSPGYIRTELVEPLAD----------YHALWEPKI---------PLGRMGRPEELTGLYLYLASAASS--YMTGSDI 267 (276)
T ss_dssp EEEEEECCBCSTTTGGGGG----------GHHHHGGGS---------TTSSCBCGGGSHHHHHHHHSGGGT--TCCSCEE
T ss_pred EEEEeeCCCcCCccccchH----------HHHHHHhcC---------CCCCCcCHHHHHHHHHHHcCcccc--CccCcEE
Confidence 9999999997654322110 111111111 112356789999999988865432 2368899
Q ss_pred EeccC
Q psy6053 398 HLTSS 402 (614)
Q Consensus 398 ni~~~ 402 (614)
++.++
T Consensus 268 ~vdGG 272 (276)
T 3r1i_A 268 VIDGG 272 (276)
T ss_dssp EESTT
T ss_pred EECcC
Confidence 98876
No 193
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=99.72 E-value=5.4e-17 Score=166.19 Aligned_cols=226 Identities=14% Similarity=0.093 Sum_probs=150.8
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
+++|+||||||||+||++++++|++.|.+ |+++.|.. +++++..+ .++. ...++.++.+|+
T Consensus 32 l~~k~vlVTGas~gIG~aia~~L~~~G~~---V~~~~r~~------~~~~~~~~-----~l~~-----~~~~~~~~~~Dv 92 (291)
T 3cxt_A 32 LKGKIALVTGASYGIGFAIASAYAKAGAT---IVFNDINQ------ELVDRGMA-----AYKA-----AGINAHGYVCDV 92 (291)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCE---EEEEESSH------HHHHHHHH-----HHHH-----TTCCCEEEECCT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEeCCH------HHHHHHHH-----HHHh-----cCCeEEEEEecC
Confidence 57899999999999999999999999875 88888863 22222111 1111 224688999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHHc---CCCceEE
Q psy6053 180 EADELAIKESDRQLLAS-------EVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKEM---KHLELFV 242 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~V 242 (614)
++++ +++.+++ .+|+|||+||.... .+.++..+++|+.|+.++++.+... .+..++|
T Consensus 93 ~d~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV 166 (291)
T 3cxt_A 93 TDED------GIQAMVAQIESEVGIIDILVNNAGIIRRVPMIEMTAAQFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKII 166 (291)
T ss_dssp TCHH------HHHHHHHHHHHHTCCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEE
Confidence 9865 6666665 48999999996532 3567788999999999988877531 2567999
Q ss_pred EEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCCE
Q psy6053 243 HISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMPC 318 (614)
Q Consensus 243 ~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp~ 318 (614)
++||..+.... | ....|+.||+..|.+.+..+. .|+++
T Consensus 167 ~isS~~~~~~~----------~----------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~v 208 (291)
T 3cxt_A 167 NICSMMSELGR----------E----------------------------TVSAYAAAKGGLKMLTKNIASEYGEANIQC 208 (291)
T ss_dssp EECCGGGTCCC----------T----------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred EECccccccCC----------C----------------------------CChHHHHHHHHHHHHHHHHHHHHhhcCeEE
Confidence 99998653211 0 015799999999888876553 58999
Q ss_pred EEeecceeecccCCCCccccCCCCchHHH--HHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccE
Q psy6053 319 LMLRPSIIIPVWREPLPGWTDNINGPTGL--LIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSI 396 (614)
Q Consensus 319 ~IvRp~~I~g~~~~p~~gw~d~~~g~~~~--~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~v 396 (614)
++++||.|.++....... . ...... +.....+.. + ...+..++|+|++++.++..... -..+.+
T Consensus 209 n~v~PG~v~T~~~~~~~~---~-~~~~~~~~~~~~~~~~~------p--~~r~~~pedvA~~v~~l~s~~~~--~itG~~ 274 (291)
T 3cxt_A 209 NGIGPGYIATPQTAPLRE---L-QKDGSRHPFDQFIIAKT------P--AARWGEAEDLMGPAVFLASDASN--FVNGHI 274 (291)
T ss_dssp EEEEECSBCCTTC----------------CHHHHHHHHHC------T--TCSCBCHHHHHHHHHHHHSGGGT--TCCSCE
T ss_pred EEEEECCCcCcchhhhcc---c-hhhhhhhhHHhhhhccC------C--CCCCCCHHHHHHHHHHHhCcccc--CCcCCe
Confidence 999999997764321100 0 000000 000000000 0 11367899999999988865431 135788
Q ss_pred EEeccC
Q psy6053 397 VHLTSS 402 (614)
Q Consensus 397 yni~~~ 402 (614)
+++.++
T Consensus 275 i~vdGG 280 (291)
T 3cxt_A 275 LYVDGG 280 (291)
T ss_dssp EEESTT
T ss_pred EEECCC
Confidence 988876
No 194
>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=99.72 E-value=2.2e-17 Score=164.70 Aligned_cols=222 Identities=13% Similarity=0.111 Sum_probs=152.2
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
+++|+|+||||||+||++++++|++.|.+ |+++.|+. ++++++. + . .++.++.+|+
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~---V~~~~r~~------~~~~~~~-------------~-~-~~~~~~~~D~ 59 (246)
T 2ag5_A 4 LDGKVIILTAAAQGIGQAAALAFAREGAK---VIATDINE------SKLQELE-------------K-Y-PGIQTRVLDV 59 (246)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCE---EEEEESCH------HHHGGGG-------------G-S-TTEEEEECCT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEECCH------HHHHHHH-------------h-c-cCceEEEeeC
Confidence 56899999999999999999999999865 88888863 2222110 0 1 2688999999
Q ss_pred CCCCCCCCHHHHHHHh---ccccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHHc---CCCceEEEEeC
Q psy6053 180 EADELAIKESDRQLLA---SEVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKEM---KHLELFVHIST 246 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~---~~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~V~vST 246 (614)
++++ +++++. .++|++||+||.... .+.++..+++|+.|+.++++.+... .+..++|++||
T Consensus 60 ~~~~------~~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS 133 (246)
T 2ag5_A 60 TKKK------QIDQFANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSS 133 (246)
T ss_dssp TCHH------HHHHHHHHCSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred CCHH------HHHHHHHHhCCCCEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEec
Confidence 9865 555554 478999999997542 3567788999999999999887531 25679999999
Q ss_pred ceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCCEEEee
Q psy6053 247 AYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMPCLMLR 322 (614)
Q Consensus 247 ~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp~~IvR 322 (614)
..+..... . ....|+.||+..|.+.+..+. .|++++++|
T Consensus 134 ~~~~~~~~--------~-----------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~ 176 (246)
T 2ag5_A 134 VASSVKGV--------V-----------------------------NRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVC 176 (246)
T ss_dssp SBTTTBCC--------T-----------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEE
T ss_pred hHhCcCCC--------C-----------------------------CCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEe
Confidence 86532210 0 015799999999998887654 489999999
Q ss_pred cceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEeccC
Q psy6053 323 PSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLTSS 402 (614)
Q Consensus 323 p~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~~~ 402 (614)
||.|.++.... +......+........... ....+...+|+|++++.++..... -..++++++.++
T Consensus 177 Pg~v~t~~~~~---~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~dvA~~v~~l~s~~~~--~~tG~~i~vdgG 242 (246)
T 2ag5_A 177 PGTVDTPSLQE---RIQARGNPEEARNDFLKRQ---------KTGRFATAEEIAMLCVYLASDESA--YVTGNPVIIDGG 242 (246)
T ss_dssp ESCEECHHHHH---HHHHSSSHHHHHHHHHHTC---------TTSSCEEHHHHHHHHHHHHSGGGT--TCCSCEEEECTT
T ss_pred eCcCcCcchhh---hhhcccCcHHHHHHHHhcC---------CCCCCCCHHHHHHHHHHHhCcccc--CCCCCEEEECCC
Confidence 99998763210 0000000111111111110 112367899999999998865432 135788888776
No 195
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=99.72 E-value=6.3e-17 Score=165.81 Aligned_cols=220 Identities=12% Similarity=0.085 Sum_probs=154.1
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
+++|+||||||+|+||++++++|++.|.+ |+++.|..... +.+.+.+ +.. ...++.++.+|+
T Consensus 39 l~~k~vlVTGas~GIG~aia~~la~~G~~---V~~~~r~~~~~---~~~~~~l--------~~~----~~~~~~~~~~Dv 100 (293)
T 3rih_A 39 LSARSVLVTGGTKGIGRGIATVFARAGAN---VAVAARSPREL---SSVTAEL--------GEL----GAGNVIGVRLDV 100 (293)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCE---EEEEESSGGGG---HHHHHHH--------TTS----SSSCEEEEECCT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEECCHHHH---HHHHHHH--------Hhh----CCCcEEEEEEeC
Confidence 57899999999999999999999999875 88888875432 1111111 100 125789999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHH----HcCCCceE
Q psy6053 180 EADELAIKESDRQLLAS-------EVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAK----EMKHLELF 241 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~----~~~~~k~~ 241 (614)
++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++.+. + .+..++
T Consensus 101 ~d~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~-~~~g~i 173 (293)
T 3rih_A 101 SDPG------SCADAARTVVDAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTA-SGRGRV 173 (293)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHH-HSSCEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH-cCCCEE
Confidence 9875 6666554 57999999997532 35677889999999999999884 3 356799
Q ss_pred EEEeCceec-cCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCC
Q psy6053 242 VHISTAYCH-LQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGM 316 (614)
Q Consensus 242 V~vST~~~~-~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~gl 316 (614)
|++||..+. ... | ....|+.||+..+.+.+..+. +|+
T Consensus 174 V~isS~~~~~~~~----------~----------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gI 215 (293)
T 3rih_A 174 ILTSSITGPVTGY----------P----------------------------GWSHYGASKAAQLGFMRTAAIELAPRGV 215 (293)
T ss_dssp EEECCSBTTTBBC----------T----------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTC
T ss_pred EEEeChhhccCCC----------C----------------------------CCHHHHHHHHHHHHHHHHHHHHHhhhCe
Confidence 999998652 110 0 015799999999988876654 589
Q ss_pred CEEEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccE
Q psy6053 317 PCLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSI 396 (614)
Q Consensus 317 p~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~v 396 (614)
++..++||.|.++.... .. ............ ..-+...+|+|++++.++..... -..+++
T Consensus 216 ~vn~v~PG~v~t~~~~~--------~~-~~~~~~~~~~~p---------~~r~~~p~dvA~~v~fL~s~~a~--~itG~~ 275 (293)
T 3rih_A 216 TVNAILPGNILTEGLVD--------MG-EEYISGMARSIP---------MGMLGSPVDIGHLAAFLATDEAG--YITGQA 275 (293)
T ss_dssp EEEEEEECSBCCHHHHH--------TC-HHHHHHHHTTST---------TSSCBCHHHHHHHHHHHHSGGGT--TCCSCE
T ss_pred EEEEEecCCCcCcchhh--------cc-HHHHHHHHhcCC---------CCCCCCHHHHHHHHHHHhCcccc--CCCCCE
Confidence 99999999998763210 01 122222222211 11245689999999988865432 136889
Q ss_pred EEeccC
Q psy6053 397 VHLTSS 402 (614)
Q Consensus 397 yni~~~ 402 (614)
+++.++
T Consensus 276 i~vdGG 281 (293)
T 3rih_A 276 IVVDGG 281 (293)
T ss_dssp EEESTT
T ss_pred EEECCC
Confidence 999887
No 196
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=99.72 E-value=6.5e-17 Score=162.09 Aligned_cols=225 Identities=11% Similarity=0.063 Sum_probs=149.9
Q ss_pred cccccCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEE
Q psy6053 96 IGETFTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPI 175 (614)
Q Consensus 96 i~~~~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v 175 (614)
.....++|+||||||+|+||++++++|++.|.+ |+++.|..... ..+.++++.. ...++.++
T Consensus 7 ~~~~~~~k~vlITGas~giG~~ia~~l~~~G~~---v~~~~~~~~~~-~~~~~~~~~~--------------~~~~~~~~ 68 (256)
T 3ezl_A 7 HHMVMSQRIAYVTGGMGGIGTSICQRLHKDGFR---VVAGCGPNSPR-RVKWLEDQKA--------------LGFDFYAS 68 (256)
T ss_dssp ------CEEEEETTTTSHHHHHHHHHHHHTTEE---EEEEECTTCSS-HHHHHHHHHH--------------TTCCCEEE
T ss_pred CCCCCCCCEEEEECCCChHHHHHHHHHHHCCCE---EEEEeCCCHHH-HHHHHHHHHh--------------cCCeeEEE
Confidence 344567899999999999999999999999865 77777433222 2222222211 33578899
Q ss_pred eCCCCCCCCCCCHHHHHHHhc-------cccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHHc---CCC
Q psy6053 176 SGDAEADELAIKESDRQLLAS-------EVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKEM---KHL 238 (614)
Q Consensus 176 ~gDl~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~ 238 (614)
.+|+++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++.+... .+.
T Consensus 69 ~~Dv~~~~------~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~ 142 (256)
T 3ezl_A 69 EGNVGDWD------STKQAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGW 142 (256)
T ss_dssp ECCTTCHH------HHHHHHHHHHHHTCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred ecCCCCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Confidence 99999865 6666655 68999999997532 3567788999999988887766331 255
Q ss_pred ceEEEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----C
Q psy6053 239 ELFVHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----N 314 (614)
Q Consensus 239 k~~V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~ 314 (614)
.++|++||..+..... ....|+.||+..+.+.+..+. +
T Consensus 143 g~iv~isS~~~~~~~~--------------------------------------~~~~Y~asK~a~~~~~~~la~e~~~~ 184 (256)
T 3ezl_A 143 GRIINISSVNGQKGQF--------------------------------------GQTNYSTAKAGIHGFTMSLAQEVATK 184 (256)
T ss_dssp EEEEEECCCCGGGSCS--------------------------------------CCHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred CEEEEEcchhhccCCC--------------------------------------CCcccHHHHHHHHHHHHHHHHHHHHh
Confidence 7899999986543210 015799999988877766554 5
Q ss_pred CCCEEEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCc
Q psy6053 315 GMPCLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQ 394 (614)
Q Consensus 315 glp~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~ 394 (614)
|+++.+++||.|.++.... . . ......+.... ....+...+|+|++++.++..... ...+
T Consensus 185 gi~v~~v~PG~v~t~~~~~-------~-~-~~~~~~~~~~~---------~~~~~~~~~dva~~~~~l~s~~~~--~~tG 244 (256)
T 3ezl_A 185 GVTVNTVSPGYIGTDMVKA-------I-R-PDVLEKIVATI---------PVRRLGSPDEIGSIVAWLASEESG--FSTG 244 (256)
T ss_dssp TEEEEEEEECSBCCHHHHT-------S-C-HHHHHHHHHHS---------TTSSCBCHHHHHHHHHHHHSGGGT--TCCS
T ss_pred CCEEEEEEECcccCccccc-------c-C-HHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHhCCccc--CCcC
Confidence 8999999999886653211 0 1 11222222211 112366889999999988854432 2368
Q ss_pred cEEEeccC
Q psy6053 395 SIVHLTSS 402 (614)
Q Consensus 395 ~vyni~~~ 402 (614)
+++++.++
T Consensus 245 ~~i~vdgG 252 (256)
T 3ezl_A 245 ADFSLNGG 252 (256)
T ss_dssp CEEEESTT
T ss_pred cEEEECCC
Confidence 89999877
No 197
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=99.72 E-value=1.3e-16 Score=162.53 Aligned_cols=223 Identities=13% Similarity=0.092 Sum_probs=145.1
Q ss_pred ccCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCC
Q psy6053 99 TFTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGD 178 (614)
Q Consensus 99 ~~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gD 178 (614)
..++|+++||||+|+||++++++|++.|.+ |+++.|... +++++..+ .+. . ...++.++.+|
T Consensus 26 ~~~~k~~lVTGas~GIG~aia~~la~~G~~---V~~~~~~~~-----~~~~~~~~-----~~~----~-~~~~~~~~~~D 87 (280)
T 4da9_A 26 QKARPVAIVTGGRRGIGLGIARALAASGFD---IAITGIGDA-----EGVAPVIA-----ELS----G-LGARVIFLRAD 87 (280)
T ss_dssp CCCCCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCCH-----HHHHHHHH-----HHH----H-TTCCEEEEECC
T ss_pred ccCCCEEEEecCCCHHHHHHHHHHHHCCCe---EEEEeCCCH-----HHHHHHHH-----HHH----h-cCCcEEEEEec
Confidence 357899999999999999999999999876 788876432 22222111 111 1 33578999999
Q ss_pred CCCCCCCCCHHHHHHHhc-------cccEEEEcccccC---------hhHHHHHHHHHhHHHHHHHHHHHHHc---CC--
Q psy6053 179 AEADELAIKESDRQLLAS-------EVDIMIHGAATIR---------FDEALKKAVLLNTRGTKMMLSLAKEM---KH-- 237 (614)
Q Consensus 179 l~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~---------~~~~~~~~~~~Nv~gt~~ll~la~~~---~~-- 237 (614)
+++++ +++.+++ ++|++||+||... -.+.++..+++|+.|+.++++.+... .+
T Consensus 88 v~d~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~ 161 (280)
T 4da9_A 88 LADLS------SHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDAR 161 (280)
T ss_dssp TTSGG------GHHHHHHHHHHHHSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCC
T ss_pred CCCHH------HHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCC
Confidence 99987 6666655 7899999999731 13567788999999999998887652 11
Q ss_pred -CceEEEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh---
Q psy6053 238 -LELFVHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN--- 313 (614)
Q Consensus 238 -~k~~V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~--- 313 (614)
..++|++||..+..... ....|+.||+..+.+.+..+.
T Consensus 162 ~~g~Iv~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~l~~~la~e~~ 203 (280)
T 4da9_A 162 ASRSIINITSVSAVMTSP--------------------------------------ERLDYCMSKAGLAAFSQGLALRLA 203 (280)
T ss_dssp CCEEEEEECCC---------------------------------------------CCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEEcchhhccCCC--------------------------------------CccHHHHHHHHHHHHHHHHHHHHH
Confidence 45899999986542110 014799999999988877654
Q ss_pred -CCCCEEEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCC
Q psy6053 314 -NGMPCLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEH 392 (614)
Q Consensus 314 -~glp~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~ 392 (614)
.|+++..++||.|.++......+ ........+ ......+..++|+|++++.++..... -.
T Consensus 204 ~~gI~vn~v~PG~v~T~~~~~~~~---------~~~~~~~~~--------~~p~~r~~~pedvA~~v~~L~s~~~~--~i 264 (280)
T 4da9_A 204 ETGIAVFEVRPGIIRSDMTAAVSG---------KYDGLIESG--------LVPMRRWGEPEDIGNIVAGLAGGQFG--FA 264 (280)
T ss_dssp TTTEEEEEEEECCBCC---------------------------------------CCBCHHHHHHHHHHHHTSTTG--GG
T ss_pred HhCcEEEEEeecCCcCCchhhcch---------hHHHHHhhc--------CCCcCCcCCHHHHHHHHHHHhCcccc--CC
Confidence 58999999999987654321110 000000000 11123467889999999988865431 12
Q ss_pred CccEEEeccC
Q psy6053 393 RQSIVHLTSS 402 (614)
Q Consensus 393 ~~~vyni~~~ 402 (614)
.++++++.++
T Consensus 265 tG~~i~vdGG 274 (280)
T 4da9_A 265 TGSVIQADGG 274 (280)
T ss_dssp TTCEEEESTT
T ss_pred CCCEEEECCC
Confidence 6889999877
No 198
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=99.72 E-value=6.4e-17 Score=164.86 Aligned_cols=233 Identities=11% Similarity=0.057 Sum_probs=154.3
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
+++|+++||||||+||++++++|++.|++ |+++.|.... ..+.+.+. +.. ...++.++.+|+
T Consensus 27 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~---V~~~~r~~~~--~~~~~~~~--------~~~-----~~~~~~~~~~D~ 88 (283)
T 1g0o_A 27 LEGKVALVTGAGRGIGREMAMELGRRGCK---VIVNYANSTE--SAEEVVAA--------IKK-----NGSDAACVKANV 88 (283)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCE---EEEEESSCHH--HHHHHHHH--------HHH-----TTCCEEEEECCT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEeCCchH--HHHHHHHH--------HHH-----hCCCeEEEEcCC
Confidence 57899999999999999999999999876 8888886421 11111111 111 234688999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHHc-CCCceEEEE
Q psy6053 180 EADELAIKESDRQLLAS-------EVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKEM-KHLELFVHI 244 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~-~~~k~~V~v 244 (614)
++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++++... .+..++|++
T Consensus 89 ~~~~------~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~i 162 (283)
T 1g0o_A 89 GVVE------DIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILM 162 (283)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEE
Confidence 9865 5555543 68999999997542 3567788999999999999998873 345799999
Q ss_pred eCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCCEEE
Q psy6053 245 STAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMPCLM 320 (614)
Q Consensus 245 ST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp~~I 320 (614)
||..+..... + ....|+.||+..|.+.+..+. .|+++.+
T Consensus 163 sS~~~~~~~~---------~----------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~ 205 (283)
T 1g0o_A 163 GSITGQAKAV---------P----------------------------KHAVYSGSKGAIETFARCMAIDMADKKITVNV 205 (283)
T ss_dssp CCGGGTCSSC---------S----------------------------SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEE
T ss_pred echhhccCCC---------C----------------------------CCcchHHHHHHHHHHHHHHHHHhcccCeEEEE
Confidence 9986532110 0 015799999999988877653 5899999
Q ss_pred eecceeecccCCCC-ccccCCCC-chHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEE
Q psy6053 321 LRPSIIIPVWREPL-PGWTDNIN-GPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVH 398 (614)
Q Consensus 321 vRp~~I~g~~~~p~-~gw~d~~~-g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyn 398 (614)
++||.|.++..... ..+..... ........+..+. ......+...+|+|++++.++..... -..+.+++
T Consensus 206 v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~p~~r~~~p~dvA~~v~~l~s~~~~--~itG~~i~ 276 (283)
T 1g0o_A 206 VAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQ-------WSPLRRVGLPIDIARVVCFLASNDGG--WVTGKVIG 276 (283)
T ss_dssp EEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHH-------SCTTCSCBCHHHHHHHHHHHHSGGGT--TCCSCEEE
T ss_pred EecCcccchhhhhhhhhccccccccCHHHHHHHHhhc-------CCCCCCCcCHHHHHHHHHHHhCcccc--CcCCCEEE
Confidence 99999977532100 00000000 0011111111100 00112367889999999998865432 13678888
Q ss_pred eccC
Q psy6053 399 LTSS 402 (614)
Q Consensus 399 i~~~ 402 (614)
+.++
T Consensus 277 vdgG 280 (283)
T 1g0o_A 277 IDGG 280 (283)
T ss_dssp ESTT
T ss_pred eCCC
Confidence 8776
No 199
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=99.72 E-value=8.7e-17 Score=161.40 Aligned_cols=221 Identities=11% Similarity=0.133 Sum_probs=153.9
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
++||+++||||+|+||++++++|++.|.+ |+++.|+. ++++++.+ + ...++.++.+|+
T Consensus 6 l~gk~~lVTGas~gIG~a~a~~l~~~G~~---V~~~~r~~------~~~~~~~~---------~----~~~~~~~~~~Dv 63 (255)
T 4eso_A 6 YQGKKAIVIGGTHGMGLATVRRLVEGGAE---VLLTGRNE------SNIARIRE---------E----FGPRVHALRSDI 63 (255)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTCE---EEEEESCH------HHHHHHHH---------H----HGGGEEEEECCT
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEeCCH------HHHHHHHH---------H----hCCcceEEEccC
Confidence 57899999999999999999999999875 88888863 23333211 1 124689999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcccccC-------hhHHHHHHHHHhHHHHHHHHHHHHHc-CCCceEEEE
Q psy6053 180 EADELAIKESDRQLLAS-------EVDIMIHGAATIR-------FDEALKKAVLLNTRGTKMMLSLAKEM-KHLELFVHI 244 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~-------~~~~~~~~~~~Nv~gt~~ll~la~~~-~~~k~~V~v 244 (614)
++++ +++.+++ ++|++||+||... -.+.++..+++|+.|+.++++.+... .+-.++|++
T Consensus 64 ~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~i 137 (255)
T 4eso_A 64 ADLN------EIAVLGAAAGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFT 137 (255)
T ss_dssp TCHH------HHHHHHHHHHHHHSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred CCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEE
Confidence 9876 5665543 6899999999753 23567788999999999999998763 223489999
Q ss_pred eCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCCEEE
Q psy6053 245 STAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMPCLM 320 (614)
Q Consensus 245 ST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp~~I 320 (614)
||..+..... ....|+.||+..+.+.+..+. +|+++..
T Consensus 138 sS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~ 179 (255)
T 4eso_A 138 SSVADEGGHP--------------------------------------GMSVYSASKAALVSFASVLAAELLPRGIRVNS 179 (255)
T ss_dssp CCGGGSSBCT--------------------------------------TBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEE
T ss_pred CChhhcCCCC--------------------------------------CchHHHHHHHHHHHHHHHHHHHHhhhCcEEEE
Confidence 9987543211 015799999999888877655 5899999
Q ss_pred eecceeecccCCCCccccCCCCc-hHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEe
Q psy6053 321 LRPSIIIPVWREPLPGWTDNING-PTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHL 399 (614)
Q Consensus 321 vRp~~I~g~~~~p~~gw~d~~~g-~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni 399 (614)
++||.|.++..... .... ....+...... ......+...+|+|++++.++.. .. -..++++++
T Consensus 180 v~PG~v~T~~~~~~-----~~~~~~~~~~~~~~~~--------~~p~~r~~~pedvA~~v~~L~s~-~~--~itG~~i~v 243 (255)
T 4eso_A 180 VSPGFIDTPTKGVA-----GITEAERAEFKTLGDN--------ITPMKRNGTADEVARAVLFLAFE-AT--FTTGAKLAV 243 (255)
T ss_dssp EEECSBCCSSTTCT-----TSCHHHHHHHHHHHHH--------HSTTSSCBCHHHHHHHHHHHHHT-CT--TCCSCEEEE
T ss_pred EecCcccCcccccc-----cCChhhHHHHHHHHhc--------cCCCCCCcCHHHHHHHHHHHcCc-Cc--CccCCEEEE
Confidence 99999977643210 0011 01111111110 01112356889999999988865 21 236889999
Q ss_pred ccC
Q psy6053 400 TSS 402 (614)
Q Consensus 400 ~~~ 402 (614)
.++
T Consensus 244 dGG 246 (255)
T 4eso_A 244 DGG 246 (255)
T ss_dssp STT
T ss_pred CCC
Confidence 888
No 200
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=99.72 E-value=1.4e-16 Score=160.61 Aligned_cols=216 Identities=15% Similarity=0.130 Sum_probs=152.3
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
+++|+++||||||+||++++++|++.|++ |+++.|+. +++++..+. ...++.++.+|+
T Consensus 4 l~~k~vlITGas~gIG~aia~~l~~~G~~---V~~~~r~~------~~~~~~~~~-------------~~~~~~~~~~D~ 61 (263)
T 2a4k_A 4 LSGKTILVTGAASGIGRAALDLFAREGAS---LVAVDREE------RLLAEAVAA-------------LEAEAIAVVADV 61 (263)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCE---EEEEESCH------HHHHHHHHT-------------CCSSEEEEECCT
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEeCCH------HHHHHHHHH-------------hcCceEEEEcCC
Confidence 56899999999999999999999999875 88888863 333332211 224688999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHHc-CCCceEEEE
Q psy6053 180 EADELAIKESDRQLLAS-------EVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKEM-KHLELFVHI 244 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~-~~~k~~V~v 244 (614)
++++ +++.+++ .+|++||+||.... .+.++..+++|+.|+.++++++... ++..++|++
T Consensus 62 ~~~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~i 135 (263)
T 2a4k_A 62 SDPK------AVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLT 135 (263)
T ss_dssp TSHH------HHHHHHHHHHHHHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEE
Confidence 9865 6666655 47999999997542 3456778999999999999998773 123589999
Q ss_pred eCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCCEEE
Q psy6053 245 STAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMPCLM 320 (614)
Q Consensus 245 ST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp~~I 320 (614)
||..+. ... . ...|+.||+..+.+.+.... .|+++++
T Consensus 136 sS~~~~-~~~---~-----------------------------------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~ 176 (263)
T 2a4k_A 136 GSVAGL-GAF---G-----------------------------------LAHYAAGKLGVVGLARTLALELARKGVRVNV 176 (263)
T ss_dssp CCCTTC-CHH---H-----------------------------------HHHHHHCSSHHHHHHHHHHHHHTTTTCEEEE
T ss_pred ecchhc-CCC---C-----------------------------------cHHHHHHHHHHHHHHHHHHHHhhhhCcEEEE
Confidence 999764 110 0 15799999977777765543 5899999
Q ss_pred eecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEec
Q psy6053 321 LRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLT 400 (614)
Q Consensus 321 vRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~ 400 (614)
+|||.|.++.... . .+ .......... ....+...+|+|++++.++..... -..++++++.
T Consensus 177 v~PG~v~t~~~~~-------~-~~-~~~~~~~~~~---------p~~~~~~p~dvA~~v~~l~s~~~~--~~tG~~i~vd 236 (263)
T 2a4k_A 177 LLPGLIQTPMTAG-------L-PP-WAWEQEVGAS---------PLGRAGRPEEVAQAALFLLSEESA--YITGQALYVD 236 (263)
T ss_dssp EEECSBCCGGGTT-------S-CH-HHHHHHHHTS---------TTCSCBCHHHHHHHHHHHHSGGGT--TCCSCEEEES
T ss_pred EEeCcCcCchhhh-------c-CH-HHHHHHHhcC---------CCCCCcCHHHHHHHHHHHhCcccc--CCcCCEEEEC
Confidence 9999997764321 1 11 1111111111 012367899999999988865431 1367889888
Q ss_pred cC
Q psy6053 401 SS 402 (614)
Q Consensus 401 ~~ 402 (614)
++
T Consensus 237 gG 238 (263)
T 2a4k_A 237 GG 238 (263)
T ss_dssp TT
T ss_pred CC
Confidence 77
No 201
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=99.72 E-value=2.4e-16 Score=161.09 Aligned_cols=226 Identities=16% Similarity=0.135 Sum_probs=154.2
Q ss_pred ccCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCC
Q psy6053 99 TFTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGD 178 (614)
Q Consensus 99 ~~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gD 178 (614)
.+++|+|+||||+|+||++++++|++.|....+|++..|.. ++++++.+ .+....+ ..++.++.+|
T Consensus 30 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~------~~~~~~~~-----~l~~~~~---~~~~~~~~~D 95 (287)
T 3rku_A 30 RLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRL------EKLEELKK-----TIDQEFP---NAKVHVAQLD 95 (287)
T ss_dssp HHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCH------HHHHHHHH-----HHHHHCT---TCEEEEEECC
T ss_pred hcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCH------HHHHHHHH-----HHHhhCC---CCeEEEEECC
Confidence 36789999999999999999999999987444688888863 22322211 1111111 2578999999
Q ss_pred CCCCCCCCCHHHHHHHhc-------cccEEEEcccccC--------hhHHHHHHHHHhHHHHHHHHHHHHHc---CCCce
Q psy6053 179 AEADELAIKESDRQLLAS-------EVDIMIHGAATIR--------FDEALKKAVLLNTRGTKMMLSLAKEM---KHLEL 240 (614)
Q Consensus 179 l~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~--------~~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~ 240 (614)
+++++ +++.+++ ++|++||+||... -.+.++..+++|+.|+.++++.+... .+..+
T Consensus 96 v~d~~------~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~ 169 (287)
T 3rku_A 96 ITQAE------KIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGD 169 (287)
T ss_dssp TTCGG------GHHHHHHTSCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCE
T ss_pred CCCHH------HHHHHHHHHHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCe
Confidence 99987 7777765 5899999999643 24567889999999999999988421 25579
Q ss_pred EEEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCC
Q psy6053 241 FVHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGM 316 (614)
Q Consensus 241 ~V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~gl 316 (614)
+|++||..+.... | ....|+.||+..+.+.+..+. .|+
T Consensus 170 IV~isS~~~~~~~----------~----------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gI 211 (287)
T 3rku_A 170 IVNLGSIAGRDAY----------P----------------------------TGSIYCASKFAVGAFTDSLRKELINTKI 211 (287)
T ss_dssp EEEECCGGGTSCC----------T----------------------------TCHHHHHHHHHHHHHHHHHHHHTTTSSC
T ss_pred EEEECChhhcCCC----------C----------------------------CCchHHHHHHHHHHHHHHHHHHhhhcCC
Confidence 9999998653221 0 015799999999988877655 589
Q ss_pred CEEEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccE
Q psy6053 317 PCLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSI 396 (614)
Q Consensus 317 p~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~v 396 (614)
++..++||.|..+... ....+............ ..+..+|+|++++.++..... -..+++
T Consensus 212 rvn~v~PG~v~T~~~~------~~~~~~~~~~~~~~~~~------------~p~~pedvA~~v~~l~s~~~~--~i~g~~ 271 (287)
T 3rku_A 212 RVILIAPGLVETEFSL------VRYRGNEEQAKNVYKDT------------TPLMADDVADLIVYATSRKQN--TVIADT 271 (287)
T ss_dssp EEEEEEESCEESSHHH------HHTTTCHHHHHHHHTTS------------CCEEHHHHHHHHHHHHTSCTT--EEEEEE
T ss_pred EEEEEeCCcCcCcccc------ccccCcHHHHHHhhccc------------CCCCHHHHHHHHHHHhCCCCC--eEecce
Confidence 9999999998654210 00001111111111111 123789999999998865432 124677
Q ss_pred EEeccC
Q psy6053 397 VHLTSS 402 (614)
Q Consensus 397 yni~~~ 402 (614)
+++.++
T Consensus 272 i~v~~g 277 (287)
T 3rku_A 272 LIFPTN 277 (287)
T ss_dssp EEEETT
T ss_pred EEeeCC
Confidence 877766
No 202
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=99.72 E-value=7.7e-17 Score=162.94 Aligned_cols=227 Identities=14% Similarity=0.073 Sum_probs=152.4
Q ss_pred cccccCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEE
Q psy6053 96 IGETFTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPI 175 (614)
Q Consensus 96 i~~~~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v 175 (614)
....+++|+|+||||||+||++++++|++.|++ |+++.|... ++++..+ .+... ...++.++
T Consensus 15 ~~~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~---V~~~~r~~~------~~~~~~~-----~l~~~----~~~~~~~~ 76 (267)
T 1vl8_A 15 EVFDLRGRVALVTGGSRGLGFGIAQGLAEAGCS---VVVASRNLE------EASEAAQ-----KLTEK----YGVETMAF 76 (267)
T ss_dssp --CCCTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCHH------HHHHHHH-----HHHHH----HCCCEEEE
T ss_pred CCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEeCCHH------HHHHHHH-----HHHHh----cCCeEEEE
Confidence 344567899999999999999999999999876 888888632 2222111 11000 12468889
Q ss_pred eCCCCCCCCCCCHHHHHHHhc-------cccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHHc---CCC
Q psy6053 176 SGDAEADELAIKESDRQLLAS-------EVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKEM---KHL 238 (614)
Q Consensus 176 ~gDl~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~ 238 (614)
.+|+++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++.+... .+.
T Consensus 77 ~~Dl~~~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~ 150 (267)
T 1vl8_A 77 RCDVSNYE------EVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDN 150 (267)
T ss_dssp ECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSS
T ss_pred EcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC
Confidence 99999865 6666655 68999999997532 2557788999999999998887431 356
Q ss_pred ceEEEEeCce-eccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----
Q psy6053 239 ELFVHISTAY-CHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN---- 313 (614)
Q Consensus 239 k~~V~vST~~-~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~---- 313 (614)
.++|++||.. +.... | ....|+.||+..|.+++..+.
T Consensus 151 g~iv~isS~~~~~~~~----------~----------------------------~~~~Y~asK~a~~~~~~~la~e~~~ 192 (267)
T 1vl8_A 151 PSIINIGSLTVEEVTM----------P----------------------------NISAYAASKGGVASLTKALAKEWGR 192 (267)
T ss_dssp CEEEEECCGGGTCCCS----------S----------------------------SCHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred cEEEEECCcchhccCC----------C----------------------------CChhHHHHHHHHHHHHHHHHHHhcc
Confidence 7999999986 32110 0 015799999999998877654
Q ss_pred CCCCEEEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCC
Q psy6053 314 NGMPCLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHR 393 (614)
Q Consensus 314 ~glp~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~ 393 (614)
.|+++++++||.|.++... .+.. .+ .......... ....+...+|+|++++.++..... -..
T Consensus 193 ~gi~v~~v~PG~v~T~~~~---~~~~---~~-~~~~~~~~~~---------p~~~~~~p~dvA~~v~~l~s~~~~--~it 254 (267)
T 1vl8_A 193 YGIRVNVIAPGWYRTKMTE---AVFS---DP-EKLDYMLKRI---------PLGRTGVPEDLKGVAVFLASEEAK--YVT 254 (267)
T ss_dssp GTCEEEEEEECCBCSTTTH---HHHT---CH-HHHHHHHHTC---------TTSSCBCGGGGHHHHHHHHSGGGT--TCC
T ss_pred cCeEEEEEEeccCcccccc---cccc---Ch-HHHHHHHhhC---------CCCCCcCHHHHHHHHHHHcCcccc--CCc
Confidence 5899999999988654211 0000 01 1111111110 012367889999999988865431 135
Q ss_pred ccEEEeccC
Q psy6053 394 QSIVHLTSS 402 (614)
Q Consensus 394 ~~vyni~~~ 402 (614)
++++++.++
T Consensus 255 G~~i~vdGG 263 (267)
T 1vl8_A 255 GQIIFVDGG 263 (267)
T ss_dssp SCEEEESTT
T ss_pred CCeEEECCC
Confidence 788888776
No 203
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=99.72 E-value=9.4e-17 Score=158.61 Aligned_cols=188 Identities=19% Similarity=0.191 Sum_probs=129.8
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCCC
Q psy6053 102 GKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAEA 181 (614)
Q Consensus 102 ~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~~ 181 (614)
+|+|+||||||+||++++++|++.|++ |+++.|+. ++++++.+ ...++.++.+|+++
T Consensus 5 ~k~vlVtGasggiG~~~a~~l~~~G~~---V~~~~r~~------~~~~~~~~--------------~~~~~~~~~~D~~~ 61 (234)
T 2ehd_A 5 KGAVLITGASRGIGEATARLLHAKGYR---VGLMARDE------KRLQALAA--------------ELEGALPLPGDVRE 61 (234)
T ss_dssp CCEEEESSTTSHHHHHHHHHHHHTTCE---EEEEESCH------HHHHHHHH--------------HSTTCEEEECCTTC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEECCH------HHHHHHHH--------------HhhhceEEEecCCC
Confidence 578999999999999999999999876 88888863 22332211 11257889999998
Q ss_pred CCCCCCHHHHHHHhc-------cccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHH----HHcCCCceEEE
Q psy6053 182 DELAIKESDRQLLAS-------EVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLA----KEMKHLELFVH 243 (614)
Q Consensus 182 ~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la----~~~~~~k~~V~ 243 (614)
++ +++.+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+ ++ .+.+++|+
T Consensus 62 ~~------~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~-~~~~~iv~ 134 (234)
T 2ehd_A 62 EG------DWARAVAAMEEAFGELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLR-RGGGTIVN 134 (234)
T ss_dssp HH------HHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHT-TTCEEEEE
T ss_pred HH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-CCCcEEEE
Confidence 65 6665554 68999999996432 3557788999999997666554 44 35789999
Q ss_pred EeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCCEE
Q psy6053 244 ISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMPCL 319 (614)
Q Consensus 244 vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp~~ 319 (614)
+||..+.... | ....|+.||+..|.+.+.... .|++++
T Consensus 135 isS~~~~~~~----------~----------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~ 176 (234)
T 2ehd_A 135 VGSLAGKNPF----------K----------------------------GGAAYNASKFGLLGLAGAAMLDLREANVRVV 176 (234)
T ss_dssp ECCTTTTSCC----------T----------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred ECCchhcCCC----------C----------------------------CCchhhHHHHHHHHHHHHHHHHHhhcCcEEE
Confidence 9998654321 0 015799999988887765543 589999
Q ss_pred EeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhh
Q psy6053 320 MLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAY 386 (614)
Q Consensus 320 IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~ 386 (614)
++|||.|..+... . .+ . . ...+..+|+|++++.++...
T Consensus 177 ~v~Pg~v~t~~~~-------~--~~---------~---~--------~~~~~~~dvA~~~~~l~~~~ 214 (234)
T 2ehd_A 177 NVLPGSVDTGFAG-------N--TP---------G---Q--------AWKLKPEDVAQAVLFALEMP 214 (234)
T ss_dssp EEECC---------------------------------------------CCHHHHHHHHHHHHHSC
T ss_pred EEEeCCCcCCccc-------c--cc---------c---c--------cCCCCHHHHHHHHHHHhCCC
Confidence 9999988553211 0 00 0 0 01468999999999988654
No 204
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=99.72 E-value=3.1e-17 Score=166.78 Aligned_cols=230 Identities=16% Similarity=0.132 Sum_probs=156.1
Q ss_pred ccCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCC
Q psy6053 99 TFTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGD 178 (614)
Q Consensus 99 ~~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gD 178 (614)
.+++|+++||||+|+||++++++|++.|.+ |+++.|.... ..+..+++ ... ...++.++.+|
T Consensus 24 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~---V~~~~r~~~~--~~~~~~~~---------~~~----~~~~~~~~~~D 85 (277)
T 4fc7_A 24 LLRDKVAFITGGGSGIGFRIAEIFMRHGCH---TVIASRSLPR--VLTAARKL---------AGA----TGRRCLPLSMD 85 (277)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHTTTCE---EEEEESCHHH--HHHHHHHH---------HHH----HSSCEEEEECC
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCE---EEEEeCCHHH--HHHHHHHH---------HHh----cCCcEEEEEcC
Confidence 467999999999999999999999999875 8888886421 11111111 110 23578999999
Q ss_pred CCCCCCCCCHHHHHHHhc-------cccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHHc---CCCceE
Q psy6053 179 AEADELAIKESDRQLLAS-------EVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKEM---KHLELF 241 (614)
Q Consensus 179 l~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~ 241 (614)
+++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++.+... .+..++
T Consensus 86 v~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~i 159 (277)
T 4fc7_A 86 VRAPP------AVMAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVI 159 (277)
T ss_dssp TTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEE
T ss_pred CCCHH------HHHHHHHHHHHHcCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEE
Confidence 99875 6666654 68999999995321 3567788999999999999987531 234689
Q ss_pred EEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCC
Q psy6053 242 VHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMP 317 (614)
Q Consensus 242 V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp 317 (614)
|++||..+..... ....|+.||+..+.+.+..+. +|++
T Consensus 160 v~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gi~ 201 (277)
T 4fc7_A 160 VNITATLGNRGQA--------------------------------------LQVHAGSAKAAVDAMTRHLAVEWGPQNIR 201 (277)
T ss_dssp EEECCSHHHHTCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred EEECchhhCCCCC--------------------------------------CcHHHHHHHHHHHHHHHHHHHHhhhcCeE
Confidence 9999986532210 015799999999988876654 5899
Q ss_pred EEEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEE
Q psy6053 318 CLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIV 397 (614)
Q Consensus 318 ~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vy 397 (614)
+..++||.|.++... ....+............ ....+...+|+|++++.++..... -..++++
T Consensus 202 vn~v~PG~v~t~~~~------~~~~~~~~~~~~~~~~~---------p~~r~~~p~dvA~~v~fL~s~~~~--~itG~~i 264 (277)
T 4fc7_A 202 VNSLAPGPISGTEGL------RRLGGPQASLSTKVTAS---------PLQRLGNKTEIAHSVLYLASPLAS--YVTGAVL 264 (277)
T ss_dssp EEEEEECCBSSSHHH------HHHSCCHHHHHHHHHTS---------TTSSCBCHHHHHHHHHHHHSGGGT--TCCSCEE
T ss_pred EEEEEECCEecchhh------hhccCCHHHHHHHhccC---------CCCCCcCHHHHHHHHHHHcCCccC--CcCCCEE
Confidence 999999998764210 00011111222222111 112356789999999998865432 2368899
Q ss_pred EeccCCcccccH
Q psy6053 398 HLTSSQEWQVSW 409 (614)
Q Consensus 398 ni~~~~~~~it~ 409 (614)
++.++ ..+++
T Consensus 265 ~vdGG--~~~~~ 274 (277)
T 4fc7_A 265 VADGG--AWLTF 274 (277)
T ss_dssp EESTT--HHHHC
T ss_pred EECCC--cccCC
Confidence 99887 44443
No 205
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=99.72 E-value=1.8e-16 Score=161.26 Aligned_cols=221 Identities=14% Similarity=0.101 Sum_probs=155.8
Q ss_pred ccCCcEEEEeccccc--ccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEe
Q psy6053 99 TFTGKTLFMTGASGF--LGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPIS 176 (614)
Q Consensus 99 ~~~~~~VLITGaTGF--lG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~ 176 (614)
.+++|+|+||||||+ ||++++++|++.|.+ |+++.|.. . .+.++++.+ ...++.++.
T Consensus 23 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~---V~~~~r~~-~---~~~~~~l~~--------------~~~~~~~~~ 81 (280)
T 3nrc_A 23 FLAGKKILITGLLSNKSIAYGIAKAMHREGAE---LAFTYVGQ-F---KDRVEKLCA--------------EFNPAAVLP 81 (280)
T ss_dssp TTTTCEEEECCCCSTTCHHHHHHHHHHHTTCE---EEEEECTT-C---HHHHHHHHG--------------GGCCSEEEE
T ss_pred ccCCCEEEEECCCCCCCHHHHHHHHHHHcCCE---EEEeeCch-H---HHHHHHHHH--------------hcCCceEEE
Confidence 367899999999988 999999999999875 88889876 2 334444321 223578999
Q ss_pred CCCCCCCCCCCHHHHHHHhc-------cccEEEEcccccCh------------hHHHHHHHHHhHHHHHHHHHHHHHc--
Q psy6053 177 GDAEADELAIKESDRQLLAS-------EVDIMIHGAATIRF------------DEALKKAVLLNTRGTKMMLSLAKEM-- 235 (614)
Q Consensus 177 gDl~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~------------~~~~~~~~~~Nv~gt~~ll~la~~~-- 235 (614)
+|+++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++.+...
T Consensus 82 ~Dl~~~~------~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~ 155 (280)
T 3nrc_A 82 CDVISDQ------EIKDLFVELGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMK 155 (280)
T ss_dssp CCTTCHH------HHHHHHHHHHHHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHT
T ss_pred eecCCHH------HHHHHHHHHHHHcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999865 6666654 47999999997532 2456678999999999999988763
Q ss_pred CCCceEEEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh--
Q psy6053 236 KHLELFVHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN-- 313 (614)
Q Consensus 236 ~~~k~~V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~-- 313 (614)
++..++|++||..+.... | ....|+.||+..+.+.+..+.
T Consensus 156 ~~~g~iv~isS~~~~~~~----------~----------------------------~~~~Y~asKaal~~~~~~la~e~ 197 (280)
T 3nrc_A 156 NRNASMVALTYIGAEKAM----------P----------------------------SYNTMGVAKASLEATVRYTALAL 197 (280)
T ss_dssp TTTCEEEEEECGGGTSCC----------T----------------------------TTHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCeEEEEeccccccCC----------C----------------------------CchhhHHHHHHHHHHHHHHHHHH
Confidence 234689999998654221 0 015799999999988876554
Q ss_pred --CCCCEEEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCC
Q psy6053 314 --NGMPCLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKE 391 (614)
Q Consensus 314 --~glp~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~ 391 (614)
+|+.+..++||.|..+.... ............... ....+...+|+|++++.++..... -
T Consensus 198 ~~~gi~v~~v~PG~v~T~~~~~-------~~~~~~~~~~~~~~~---------p~~~~~~pedvA~~v~~l~s~~~~--~ 259 (280)
T 3nrc_A 198 GEDGIKVNAVSAGPIKTLAASG-------ISNFKKMLDYNAMVS---------PLKKNVDIMEVGNTVAFLCSDMAT--G 259 (280)
T ss_dssp GGGTCEEEEEEECCCCCSGGGG-------CTTHHHHHHHHHHHS---------TTCSCCCHHHHHHHHHHTTSGGGT--T
T ss_pred HHcCcEEEEEeeccccchhhhc-------CcchHHHHHHHHhcC---------CCCCCCCHHHHHHHHHHHhCcccC--C
Confidence 58999999999997654321 111122222221111 112356789999999988765431 1
Q ss_pred CCccEEEeccC
Q psy6053 392 HRQSIVHLTSS 402 (614)
Q Consensus 392 ~~~~vyni~~~ 402 (614)
..+.++++.++
T Consensus 260 ~tG~~i~vdgG 270 (280)
T 3nrc_A 260 ITGEVVHVDAG 270 (280)
T ss_dssp CCSCEEEESTT
T ss_pred cCCcEEEECCC
Confidence 36889999887
No 206
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=99.72 E-value=1.6e-16 Score=157.29 Aligned_cols=202 Identities=14% Similarity=0.144 Sum_probs=144.6
Q ss_pred CCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCC
Q psy6053 101 TGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAE 180 (614)
Q Consensus 101 ~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~ 180 (614)
++|+|+||||||+||++++++|++.|++ |+++.|+.... .....++.+|++
T Consensus 2 ~~k~vlITGas~gIG~~~a~~l~~~G~~---V~~~~r~~~~~--------------------------~~~~~~~~~D~~ 52 (236)
T 1ooe_A 2 SSGKVIVYGGKGALGSAILEFFKKNGYT---VLNIDLSANDQ--------------------------ADSNILVDGNKN 52 (236)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHTTEE---EEEEESSCCTT--------------------------SSEEEECCTTSC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEecCcccc--------------------------ccccEEEeCCCC
Confidence 5789999999999999999999999865 88999976431 124567889999
Q ss_pred CCCCCCCHHHHHHHhc---------cccEEEEcccccC--------hhHHHHHHHHHhHHHHHHHHHHHHHc-CCCceEE
Q psy6053 181 ADELAIKESDRQLLAS---------EVDIMIHGAATIR--------FDEALKKAVLLNTRGTKMMLSLAKEM-KHLELFV 242 (614)
Q Consensus 181 ~~~lGLs~~~~~~l~~---------~vd~ViH~AA~v~--------~~~~~~~~~~~Nv~gt~~ll~la~~~-~~~k~~V 242 (614)
+++ +++.+++ ++|+|||+||... ..+.++..+++|+.|+.++++.+... .+-.++|
T Consensus 53 ~~~------~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv 126 (236)
T 1ooe_A 53 WTE------QEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQ 126 (236)
T ss_dssp HHH------HHHHHHHHHHHHHTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEE
T ss_pred CHH------HHHHHHHHHHHHhCCCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEE
Confidence 865 5555543 7999999999532 23556778999999999999998763 1225899
Q ss_pred EEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh------CCC
Q psy6053 243 HISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN------NGM 316 (614)
Q Consensus 243 ~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~------~gl 316 (614)
++||..+.... | ....|+.||+..+.+.+..+. .|+
T Consensus 127 ~isS~~~~~~~----------~----------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi 168 (236)
T 1ooe_A 127 LTGAAAAMGPT----------P----------------------------SMIGYGMAKAAVHHLTSSLAAKDSGLPDNS 168 (236)
T ss_dssp EECCGGGGSCC----------T----------------------------TBHHHHHHHHHHHHHHHHHHSTTSSCCTTC
T ss_pred EECchhhccCC----------C----------------------------CcHHHHHHHHHHHHHHHHHHHHhcccCCCe
Confidence 99998654211 0 014799999999999887654 259
Q ss_pred CEEEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccE
Q psy6053 317 PCLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSI 396 (614)
Q Consensus 317 p~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~v 396 (614)
+++++|||.|.++.. ..... ......++|.+|+|++++..+..+.. ....+..
T Consensus 169 ~v~~v~Pg~v~t~~~-----------------~~~~~---------~~~~~~~~~~~dvA~~i~~~l~s~~~-~~~~G~~ 221 (236)
T 1ooe_A 169 AVLTIMPVTLDTPMN-----------------RKWMP---------NADHSSWTPLSFISEHLLKWTTETSS-RPSSGAL 221 (236)
T ss_dssp EEEEEEESCBCCHHH-----------------HHHST---------TCCGGGCBCHHHHHHHHHHHHHCGGG-CCCTTCE
T ss_pred EEEEEecCcccCcch-----------------hhcCC---------CccccccCCHHHHHHHHHHHHcCCCc-ccccccE
Confidence 999999998855421 01100 01123467889999999866644322 1135778
Q ss_pred EEeccC
Q psy6053 397 VHLTSS 402 (614)
Q Consensus 397 yni~~~ 402 (614)
+++.++
T Consensus 222 ~~v~gg 227 (236)
T 1ooe_A 222 LKITTE 227 (236)
T ss_dssp EEEEEE
T ss_pred EEEecC
Confidence 887765
No 207
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=99.72 E-value=6.9e-17 Score=163.13 Aligned_cols=219 Identities=11% Similarity=0.047 Sum_probs=150.1
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
..+|+|+||||+|+||++++++|++.|.+ |+++.+.... ..++..+++ .. ...++.++.+|+
T Consensus 24 l~~k~vlVTGas~gIG~~la~~l~~~G~~---v~i~~~r~~~-~~~~~~~~l---------~~-----~~~~~~~~~~Dl 85 (267)
T 4iiu_A 24 AMSRSVLVTGASKGIGRAIARQLAADGFN---IGVHYHRDAA-GAQETLNAI---------VA-----NGGNGRLLSFDV 85 (267)
T ss_dssp -CCCEEEETTTTSHHHHHHHHHHHHTTCE---EEEEESSCHH-HHHHHHHHH---------HH-----TTCCEEEEECCT
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCE---EEEEeCCchH-HHHHHHHHH---------Hh-----cCCceEEEEecC
Confidence 56789999999999999999999999876 6665543211 111222222 11 335789999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcccccC-------hhHHHHHHHHHhHHHHHHHHHHHH-----HcCCCce
Q psy6053 180 EADELAIKESDRQLLAS-------EVDIMIHGAATIR-------FDEALKKAVLLNTRGTKMMLSLAK-----EMKHLEL 240 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~-------~~~~~~~~~~~Nv~gt~~ll~la~-----~~~~~k~ 240 (614)
++++ +++++++ ++|+|||+||... -.+.++..+++|+.|+.++++.+. + .+..+
T Consensus 86 ~~~~------~~~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~~g~ 158 (267)
T 4iiu_A 86 ANRE------QCREVLEHEIAQHGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGA-RQGGR 158 (267)
T ss_dssp TCHH------HHHHHHHHHHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TSCEE
T ss_pred CCHH------HHHHHHHHHHHHhCCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCcE
Confidence 9866 6666655 7899999999753 235677889999999999999874 3 35679
Q ss_pred EEEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCC
Q psy6053 241 FVHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGM 316 (614)
Q Consensus 241 ~V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~gl 316 (614)
+|++||..+..... ....|+.||+..+.+.+..+. .|+
T Consensus 159 iv~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi 200 (267)
T 4iiu_A 159 IITLSSVSGVMGNR--------------------------------------GQVNYSAAKAGIIGATKALAIELAKRKI 200 (267)
T ss_dssp EEEECCHHHHHCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTE
T ss_pred EEEEcchHhccCCC--------------------------------------CCchhHHHHHHHHHHHHHHHHHHhhcCe
Confidence 99999986532210 015799999976666655443 589
Q ss_pred CEEEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccE
Q psy6053 317 PCLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSI 396 (614)
Q Consensus 317 p~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~v 396 (614)
++.+++||.|.++..... ........... ....+..++|+|++++.++..... ...+++
T Consensus 201 ~v~~v~PG~v~t~~~~~~----------~~~~~~~~~~~---------p~~~~~~~edva~~~~~L~s~~~~--~itG~~ 259 (267)
T 4iiu_A 201 TVNCIAPGLIDTGMIEME----------ESALKEAMSMI---------PMKRMGQAEEVAGLASYLMSDIAG--YVTRQV 259 (267)
T ss_dssp EEEEEEECSBCSTTCCCC----------HHHHHHHHHTC---------TTCSCBCHHHHHHHHHHHHSGGGT--TCCSCE
T ss_pred EEEEEEEeeecCCccccc----------HHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHhCCccc--CccCCE
Confidence 999999999976543211 11222222211 112367899999999988865432 236889
Q ss_pred EEeccC
Q psy6053 397 VHLTSS 402 (614)
Q Consensus 397 yni~~~ 402 (614)
+++.+|
T Consensus 260 i~vdGG 265 (267)
T 4iiu_A 260 ISINGG 265 (267)
T ss_dssp EEESTT
T ss_pred EEeCCC
Confidence 998776
No 208
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=99.72 E-value=8.3e-17 Score=161.53 Aligned_cols=226 Identities=12% Similarity=0.081 Sum_probs=149.1
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCCC
Q psy6053 102 GKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAEA 181 (614)
Q Consensus 102 ~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~~ 181 (614)
+|+|+||||||+||++++++|++.|++ |+++.|+.. ++++..+ .+.. ...++.++.+|+++
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~---V~~~~r~~~------~~~~~~~-----~~~~-----~~~~~~~~~~D~~~ 62 (256)
T 1geg_A 2 KKVALVTGAGQGIGKAIALRLVKDGFA---VAIADYNDA------TAKAVAS-----EINQ-----AGGHAVAVKVDVSD 62 (256)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCHH------HHHHHHH-----HHHH-----TTCCEEEEECCTTS
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCE---EEEEeCCHH------HHHHHHH-----HHHh-----cCCcEEEEEecCCC
Confidence 589999999999999999999999875 888888632 2222111 1111 22468899999998
Q ss_pred CCCCCCHHHHHHHhc-------cccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHHc---CC-CceEEE
Q psy6053 182 DELAIKESDRQLLAS-------EVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKEM---KH-LELFVH 243 (614)
Q Consensus 182 ~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~-~k~~V~ 243 (614)
++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++.+... .+ ..++|+
T Consensus 63 ~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~ 136 (256)
T 1geg_A 63 RD------QVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIIN 136 (256)
T ss_dssp HH------HHHHHHHHHHHHTTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEE
T ss_pred HH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEE
Confidence 65 6776665 79999999986431 3567788999999999888877642 13 579999
Q ss_pred EeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCCEE
Q psy6053 244 ISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMPCL 319 (614)
Q Consensus 244 vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp~~ 319 (614)
+||..+.... | ....|+.||+..|.+.+..+. .|++++
T Consensus 137 isS~~~~~~~----------~----------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~ 178 (256)
T 1geg_A 137 ACSQAGHVGN----------P----------------------------ELAVYSSSKFAVRGLTQTAARDLAPLGITVN 178 (256)
T ss_dssp ECCGGGTSCC----------T----------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred ECchhhcCCC----------C----------------------------CchhHHHHHHHHHHHHHHHHHHHHHcCeEEE
Confidence 9998653211 0 014799999999888877654 589999
Q ss_pred EeecceeecccCCCCcc-ccC--CCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccE
Q psy6053 320 MLRPSIIIPVWREPLPG-WTD--NINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSI 396 (614)
Q Consensus 320 IvRp~~I~g~~~~p~~g-w~d--~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~v 396 (614)
+++||.|.++....... +.. +.. .......... ......+...+|+|++++.++..... -..+++
T Consensus 179 ~v~PG~v~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~---------~~p~~r~~~p~dvA~~v~~l~s~~~~--~~tG~~ 246 (256)
T 1geg_A 179 GYCPGIVKTPMWAEIDRQVSEAAGKP-LGYGTAEFAK---------RITLGRLSEPEDVAACVSYLASPDSD--YMTGQS 246 (256)
T ss_dssp EEEECSBSSHHHHHHHHHHHHHHTCC-TTHHHHHHHT---------TCTTCSCBCHHHHHHHHHHHHSGGGT--TCCSCE
T ss_pred EEEECCCccchhhhhhhhccccccCC-hHHHHHHHHh---------cCCCCCCcCHHHHHHHHHHHhCcccc--CCCCCE
Confidence 99999986652110000 000 000 0000011111 01112368899999999988865431 136788
Q ss_pred EEeccC
Q psy6053 397 VHLTSS 402 (614)
Q Consensus 397 yni~~~ 402 (614)
+++.++
T Consensus 247 i~vdGG 252 (256)
T 1geg_A 247 LLIDGG 252 (256)
T ss_dssp EEESSS
T ss_pred EEeCCC
Confidence 888776
No 209
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=99.72 E-value=8e-17 Score=163.87 Aligned_cols=231 Identities=11% Similarity=0.055 Sum_probs=152.4
Q ss_pred cccCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeC
Q psy6053 98 ETFTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISG 177 (614)
Q Consensus 98 ~~~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~g 177 (614)
...++|++|||||+|+||++++++|++.|.+ |+++.|+. +++++..+ .++. ...++.++.+
T Consensus 20 ~m~~~k~~lVTGas~GIG~aia~~la~~G~~---V~~~~r~~------~~~~~~~~-----~l~~-----~~~~~~~~~~ 80 (279)
T 3sju_A 20 HMSRPQTAFVTGVSSGIGLAVARTLAARGIA---VYGCARDA------KNVSAAVD-----GLRA-----AGHDVDGSSC 80 (279)
T ss_dssp -----CEEEEESTTSHHHHHHHHHHHHTTCE---EEEEESCH------HHHHHHHH-----HHHT-----TTCCEEEEEC
T ss_pred cccCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEeCCH------HHHHHHHH-----HHHh-----cCCcEEEEEC
Confidence 3457899999999999999999999999876 88888863 22222211 1111 2357899999
Q ss_pred CCCCCCCCCCHHHHHHHhc-------cccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHH---c--CCC
Q psy6053 178 DAEADELAIKESDRQLLAS-------EVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKE---M--KHL 238 (614)
Q Consensus 178 Dl~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~---~--~~~ 238 (614)
|+++++ +++.+++ .+|++||+||.... .+.++..+++|+.|+.++++.+.. + .+.
T Consensus 81 Dv~d~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~ 154 (279)
T 3sju_A 81 DVTSTD------EVHAAVAAAVERFGPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGW 154 (279)
T ss_dssp CTTCHH------HHHHHHHHHHHHHCSCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTC
T ss_pred CCCCHH------HHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCC
Confidence 999876 6666654 68999999997532 355778899999999999998765 1 245
Q ss_pred ceEEEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----C
Q psy6053 239 ELFVHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----N 314 (614)
Q Consensus 239 k~~V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~ 314 (614)
.++|++||..+..... ....|+.||+..+.+.+..+. .
T Consensus 155 g~iV~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~l~~~la~e~~~~ 196 (279)
T 3sju_A 155 GRIVNIASTGGKQGVM--------------------------------------YAAPYTASKHGVVGFTKSVGFELAKT 196 (279)
T ss_dssp EEEEEECCGGGTSCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHTGGG
T ss_pred cEEEEECChhhccCCC--------------------------------------CChhHHHHHHHHHHHHHHHHHHHHhh
Confidence 6899999986542210 015799999988887776554 5
Q ss_pred CCCEEEeecceeecccCCCCccccCCCC--chHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCC
Q psy6053 315 GMPCLMLRPSIIIPVWREPLPGWTDNIN--GPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEH 392 (614)
Q Consensus 315 glp~~IvRp~~I~g~~~~p~~gw~d~~~--g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~ 392 (614)
|+++..++||.|.++.......-....+ ............ .....+..++|+|++++.++..... -.
T Consensus 197 gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~p~~r~~~pedvA~~v~~L~s~~a~--~i 265 (279)
T 3sju_A 197 GITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAK---------IPLGRYSTPEEVAGLVGYLVTDAAA--SI 265 (279)
T ss_dssp TEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHTT---------CTTSSCBCHHHHHHHHHHHTSSGGG--GC
T ss_pred CcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHhc---------CCCCCCCCHHHHHHHHHHHhCcccc--Cc
Confidence 8999999999986653211000000000 111222222221 1223467899999999988765432 13
Q ss_pred CccEEEeccC
Q psy6053 393 RQSIVHLTSS 402 (614)
Q Consensus 393 ~~~vyni~~~ 402 (614)
.++++++.+|
T Consensus 266 tG~~i~vdGG 275 (279)
T 3sju_A 266 TAQALNVCGG 275 (279)
T ss_dssp CSCEEEESTT
T ss_pred CCcEEEECCC
Confidence 6889999877
No 210
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=99.72 E-value=1.1e-16 Score=159.78 Aligned_cols=208 Identities=11% Similarity=0.090 Sum_probs=147.4
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCCC
Q psy6053 102 GKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAEA 181 (614)
Q Consensus 102 ~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~~ 181 (614)
+|+|+||||+|+||++++++|++.|.+ |+++.|+. +++++..+ ...++.++.+|+++
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~---V~~~~r~~------~~~~~~~~--------------~~~~~~~~~~Dv~~ 58 (247)
T 3dii_A 2 NRGVIVTGGGHGIGKQICLDFLEAGDK---VCFIDIDE------KRSADFAK--------------ERPNLFYFHGDVAD 58 (247)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCE---EEEEESCH------HHHHHHHT--------------TCTTEEEEECCTTS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEeCCH------HHHHHHHH--------------hcccCCeEEeeCCC
Confidence 689999999999999999999999875 88888863 23333221 22457799999998
Q ss_pred CCCCCCHHHHHHHhc-------cccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHHc--CCCceEEEEe
Q psy6053 182 DELAIKESDRQLLAS-------EVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKEM--KHLELFVHIS 245 (614)
Q Consensus 182 ~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~--~~~k~~V~vS 245 (614)
++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++++... ++-.++|++|
T Consensus 59 ~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~is 132 (247)
T 3dii_A 59 PL------TLKKFVEYAMEKLQRIDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIA 132 (247)
T ss_dssp HH------HHHHHHHHHHHHHSCCCEEEECCC-CCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred HH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEc
Confidence 66 6666665 78999999986532 3567788999999999999988763 1235899999
Q ss_pred CceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh---CCCCEEEee
Q psy6053 246 TAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN---NGMPCLMLR 322 (614)
Q Consensus 246 T~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~---~glp~~IvR 322 (614)
|..+..... ....|+.||+..|.+.+..+. .++.+..+.
T Consensus 133 S~~~~~~~~--------------------------------------~~~~Y~asKaa~~~~~~~la~e~~~~i~vn~v~ 174 (247)
T 3dii_A 133 STRAFQSEP--------------------------------------DSEAYASAKGGIVALTHALAMSLGPDVLVNCIA 174 (247)
T ss_dssp CGGGTSCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEE
T ss_pred chhhcCCCC--------------------------------------CcHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEE
Confidence 986643210 014799999999999887765 348899999
Q ss_pred cceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEeccC
Q psy6053 323 PSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLTSS 402 (614)
Q Consensus 323 p~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~~~ 402 (614)
||.|..+...... . ..... .....+...+|+|++++.++.... ..++++++.++
T Consensus 175 PG~v~t~~~~~~~--------~-----~~~~~---------~p~~r~~~p~dva~~v~~l~~~~~----itG~~i~vdGG 228 (247)
T 3dii_A 175 PGWINVTEQQEFT--------Q-----EDCAA---------IPAGKVGTPKDISNMVLFLCQQDF----ITGETIIVDGG 228 (247)
T ss_dssp ECSBCCCC---CC--------H-----HHHHT---------STTSSCBCHHHHHHHHHHHHTCSS----CCSCEEEESTT
T ss_pred eCccCCcchhhHH--------H-----HHHhc---------CCCCCCcCHHHHHHHHHHHHcCCC----CCCcEEEECCC
Confidence 9988654322110 0 01111 011235678999999999883322 37889999776
No 211
>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}
Probab=99.71 E-value=3.3e-16 Score=157.04 Aligned_cols=223 Identities=15% Similarity=0.168 Sum_probs=151.2
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCCC
Q psy6053 102 GKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAEA 181 (614)
Q Consensus 102 ~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~~ 181 (614)
+|+++||||+|+||++++++|++.|.+ .+|++..|+. ++++++.+ + ...++.++.+|+++
T Consensus 2 gk~~lVTGas~GIG~aia~~l~~~g~~-~~v~~~~r~~------~~~~~~~~---------~----~~~~~~~~~~Dv~~ 61 (254)
T 3kzv_A 2 GKVILVTGVSRGIGKSIVDVLFSLDKD-TVVYGVARSE------APLKKLKE---------K----YGDRFFYVVGDITE 61 (254)
T ss_dssp CCEEEECSTTSHHHHHHHHHHHHHCSS-CEEEEEESCH------HHHHHHHH---------H----HGGGEEEEESCTTS
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCC-eEEEEecCCH------HHHHHHHH---------H----hCCceEEEECCCCC
Confidence 689999999999999999999999755 2577777753 23333211 1 12468999999999
Q ss_pred CCCCCCHHHHHHHhc-------cccEEEEcccccCh--------hHHHHHHHHHhHHHHHHHHHHH----HHcCCCceEE
Q psy6053 182 DELAIKESDRQLLAS-------EVDIMIHGAATIRF--------DEALKKAVLLNTRGTKMMLSLA----KEMKHLELFV 242 (614)
Q Consensus 182 ~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~--------~~~~~~~~~~Nv~gt~~ll~la----~~~~~~k~~V 242 (614)
++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++.+ ++. + .++|
T Consensus 62 ~~------~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~-~-g~iv 133 (254)
T 3kzv_A 62 DS------VLKQLVNAAVKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKT-N-GNVV 133 (254)
T ss_dssp HH------HHHHHHHHHHHHHSCCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-T-CEEE
T ss_pred HH------HHHHHHHHHHHhcCCccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-C-CeEE
Confidence 76 6666654 68999999997431 3567788999999999999988 342 3 6899
Q ss_pred EEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh--CCCCEEE
Q psy6053 243 HISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN--NGMPCLM 320 (614)
Q Consensus 243 ~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~--~glp~~I 320 (614)
++||..+..... ....|+.||+..+.+.+..+. .|+++..
T Consensus 134 ~isS~~~~~~~~--------------------------------------~~~~Y~asK~a~~~~~~~la~e~~~i~vn~ 175 (254)
T 3kzv_A 134 FVSSDACNMYFS--------------------------------------SWGAYGSSKAALNHFAMTLANEERQVKAIA 175 (254)
T ss_dssp EECCSCCCCSSC--------------------------------------CSHHHHHHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred EEcCchhccCCC--------------------------------------CcchHHHHHHHHHHHHHHHHhhccCcEEEE
Confidence 999986543210 015799999999999988775 5899999
Q ss_pred eecceeecccCCCCccccC-CCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhh-hcCCCCccEEE
Q psy6053 321 LRPSIIIPVWREPLPGWTD-NINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYL-SQKEHRQSIVH 398 (614)
Q Consensus 321 vRp~~I~g~~~~p~~gw~d-~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~-~~~~~~~~vyn 398 (614)
++||.|..+.......... ....+ ......... .....+...+|+|++++.++.... . -..+++++
T Consensus 176 v~PG~v~t~~~~~~~~~~~~~~~~~-~~~~~~~~~---------~~~~r~~~p~dva~~v~~L~s~~~~~--~itG~~i~ 243 (254)
T 3kzv_A 176 VAPGIVDTDMQVNIRENVGPSSMSA-EQLKMFRGL---------KENNQLLDSSVPATVYAKLALHGIPD--GVNGQYLS 243 (254)
T ss_dssp EECSSCCCCCSCCCCCCCCTTTSCH-HHHHHHHHH---------HTTC----CHHHHHHHHHHHHHCCCG--GGTTCEEE
T ss_pred EeCCcccchhHHHhhcccCccccCH-HHHHHHHHH---------HhcCCcCCcccHHHHHHHHHhhcccC--CCCccEEE
Confidence 9999997765443221110 00011 111111111 011236788999999998887652 1 13678888
Q ss_pred eccC
Q psy6053 399 LTSS 402 (614)
Q Consensus 399 i~~~ 402 (614)
+.++
T Consensus 244 vdg~ 247 (254)
T 3kzv_A 244 YNDP 247 (254)
T ss_dssp TTCG
T ss_pred ecCc
Confidence 8766
No 212
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=99.71 E-value=6.7e-17 Score=164.57 Aligned_cols=224 Identities=15% Similarity=0.066 Sum_probs=155.6
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
+++|+||||||+|+||++++++|++.|.+ |+++.|+. +++++..+ +... ...++.++.+|+
T Consensus 6 l~gk~vlVTGas~GIG~aia~~la~~G~~---V~~~~r~~------~~~~~~~~---------~~~~-~~~~~~~~~~Dv 66 (280)
T 3tox_A 6 LEGKIAIVTGASSGIGRAAALLFAREGAK---VVVTARNG------NALAELTD---------EIAG-GGGEAAALAGDV 66 (280)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCE---EEECCSCH------HHHHHHHH---------HHTT-TTCCEEECCCCT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEECCH------HHHHHHHH---------HHHh-cCCcEEEEECCC
Confidence 56899999999999999999999999876 88888863 22322211 1111 335789999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcccccC--------hhHHHHHHHHHhHHHHHHHHHHHHHc---CCCceE
Q psy6053 180 EADELAIKESDRQLLAS-------EVDIMIHGAATIR--------FDEALKKAVLLNTRGTKMMLSLAKEM---KHLELF 241 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~--------~~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~ 241 (614)
++++ +++.+++ ++|++||+||... -.+.++..+++|+.|+.++++++... .+..++
T Consensus 67 ~~~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~i 140 (280)
T 3tox_A 67 GDEA------LHEALVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSL 140 (280)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEE
Confidence 9876 6666665 6899999999642 13567788999999999999887542 244689
Q ss_pred EEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCC
Q psy6053 242 VHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMP 317 (614)
Q Consensus 242 V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp 317 (614)
|++||..+.... .| ....|+.||+..+.+.+..+. +|++
T Consensus 141 v~isS~~~~~~~---------~~----------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gIr 183 (280)
T 3tox_A 141 TFTSSFVGHTAG---------FA----------------------------GVAPYAASKAGLIGLVQALAVELGARGIR 183 (280)
T ss_dssp EEECCSBTTTBC---------CT----------------------------TCHHHHHHHHHHHHHHHHHHHHHHTTTEE
T ss_pred EEEcChhhCcCC---------CC----------------------------CchhHHHHHHHHHHHHHHHHHHhhhcCeE
Confidence 999998654110 00 015799999999988877654 5899
Q ss_pred EEEeecceeecccCCC-CccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccE
Q psy6053 318 CLMLRPSIIIPVWREP-LPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSI 396 (614)
Q Consensus 318 ~~IvRp~~I~g~~~~p-~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~v 396 (614)
+..++||.|.++.... .++ ..+ ........ ......+..++|+|++++.++..... -..+++
T Consensus 184 vn~v~PG~v~T~~~~~~~~~-----~~~-~~~~~~~~---------~~p~~r~~~pedvA~~v~~L~s~~a~--~itG~~ 246 (280)
T 3tox_A 184 VNALLPGGTDTPANFANLPG-----AAP-ETRGFVEG---------LHALKRIARPEEIAEAALYLASDGAS--FVTGAA 246 (280)
T ss_dssp EEEEEECSBSSTTSGGGSTT-----CCT-HHHHHHHT---------TSTTSSCBCHHHHHHHHHHHHSGGGT--TCCSCE
T ss_pred EEEEEECCCCCchhhhhccc-----cCH-HHHHHHhc---------cCccCCCcCHHHHHHHHHHHhCcccc--CCcCcE
Confidence 9999999997764321 100 011 11111111 11123467899999999998865432 136889
Q ss_pred EEeccC
Q psy6053 397 VHLTSS 402 (614)
Q Consensus 397 yni~~~ 402 (614)
+++.+|
T Consensus 247 i~vdGG 252 (280)
T 3tox_A 247 LLADGG 252 (280)
T ss_dssp EEESTT
T ss_pred EEECCC
Confidence 999888
No 213
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=99.71 E-value=1.3e-16 Score=161.13 Aligned_cols=223 Identities=11% Similarity=0.085 Sum_probs=153.7
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
+++|+||||||+|+||++++++|++.|.+ |+++.|+.. ++++..+ .+... ...++.++.+|+
T Consensus 18 l~~k~vlVTGas~gIG~aia~~l~~~G~~---V~~~~r~~~------~~~~~~~-----~l~~~----~~~~~~~~~~Dv 79 (266)
T 4egf_A 18 LDGKRALITGATKGIGADIARAFAAAGAR---LVLSGRDVS------ELDAARR-----ALGEQ----FGTDVHTVAIDL 79 (266)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCE---EEEEESCHH------HHHHHHH-----HHHHH----HCCCEEEEECCT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEeCCHH------HHHHHHH-----HHHHh----cCCcEEEEEecC
Confidence 57899999999999999999999999876 888888632 2222111 11110 225789999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHHc----CCCceE
Q psy6053 180 EADELAIKESDRQLLAS-------EVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKEM----KHLELF 241 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~----~~~k~~ 241 (614)
++++ +.+.+++ ++|++||+||.... .+.++..+++|+.|+.++++.+... +.-.++
T Consensus 80 ~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~i 153 (266)
T 4egf_A 80 AEPD------APAELARRAAEAFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAI 153 (266)
T ss_dssp TSTT------HHHHHHHHHHHHHTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEE
Confidence 9987 6666654 78999999997532 3557788999999999999887542 124589
Q ss_pred EEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCC
Q psy6053 242 VHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMP 317 (614)
Q Consensus 242 V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp 317 (614)
|++||..+..... ....|+.||+..+.+.+..+. +|++
T Consensus 154 v~isS~~~~~~~~--------------------------------------~~~~Y~asK~a~~~l~~~la~e~~~~gI~ 195 (266)
T 4egf_A 154 ITVASAAALAPLP--------------------------------------DHYAYCTSKAGLVMATKVLARELGPHGIR 195 (266)
T ss_dssp EEECCGGGTSCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred EEEcchhhccCCC--------------------------------------CChHHHHHHHHHHHHHHHHHHHHhhhCeE
Confidence 9999987642210 015799999998888876654 5899
Q ss_pred EEEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEE
Q psy6053 318 CLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIV 397 (614)
Q Consensus 318 ~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vy 397 (614)
+..++||.|..+.... .............. .....+...+|+|++++.++..... -..++++
T Consensus 196 vn~v~PG~v~T~~~~~-------~~~~~~~~~~~~~~---------~p~~r~~~p~dva~~v~~L~s~~~~--~itG~~i 257 (266)
T 4egf_A 196 ANSVCPTVVLTEMGQR-------VWGDEAKSAPMIAR---------IPLGRFAVPHEVSDAVVWLASDAAS--MINGVDI 257 (266)
T ss_dssp EEEEEESCBCSHHHHH-------HTCSHHHHHHHHTT---------CTTSSCBCHHHHHHHHHHHHSGGGT--TCCSCEE
T ss_pred EEEEEeCCCcCchhhh-------hccChHHHHHHHhc---------CCCCCCcCHHHHHHHHHHHhCchhc--CccCcEE
Confidence 9999999986653210 00111111122211 1112356799999999988865432 1368899
Q ss_pred EeccC
Q psy6053 398 HLTSS 402 (614)
Q Consensus 398 ni~~~ 402 (614)
++.++
T Consensus 258 ~vdGG 262 (266)
T 4egf_A 258 PVDGG 262 (266)
T ss_dssp EESTT
T ss_pred EECCC
Confidence 99877
No 214
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=99.71 E-value=2.2e-16 Score=160.41 Aligned_cols=238 Identities=12% Similarity=0.077 Sum_probs=156.3
Q ss_pred ccccCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCc-------CHHHHHHHHHhChhhHHhhhhcccccc
Q psy6053 97 GETFTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGK-------NARQRIEELFASPLFNLLKSVHGQKII 169 (614)
Q Consensus 97 ~~~~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~-------~~~~Rl~~~~~~~~f~~l~~~~p~~~~ 169 (614)
...+++|+++||||+|+||++++++|++.|.+ |+++.|..+.. ...+++++..+ .+. . ..
T Consensus 6 ~~~l~~k~~lVTGas~GIG~a~a~~la~~G~~---V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-----~~~----~-~~ 72 (277)
T 3tsc_A 6 AGKLEGRVAFITGAARGQGRAHAVRMAAEGAD---IIAVDIAGKLPSCVPYDPASPDDLSETVR-----LVE----A-AN 72 (277)
T ss_dssp -CTTTTCEEEEESTTSHHHHHHHHHHHHTTCE---EEEEECCSCCCTTCCSCCCCHHHHHHHHH-----HHH----H-TT
T ss_pred ccccCCCEEEEECCccHHHHHHHHHHHHcCCE---EEEEeccccccccccccccCHHHHHHHHH-----HHH----h-cC
Confidence 34467899999999999999999999999876 88888853210 01233333221 111 1 33
Q ss_pred CeEEEEeCCCCCCCCCCCHHHHHHHhc-------cccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHHc
Q psy6053 170 DKVLPISGDAEADELAIKESDRQLLAS-------EVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKEM 235 (614)
Q Consensus 170 ~~v~~v~gDl~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~ 235 (614)
.++.++.+|+++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++.+...
T Consensus 73 ~~~~~~~~D~~~~~------~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~ 146 (277)
T 3tsc_A 73 RRIVAAVVDTRDFD------RLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPR 146 (277)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CeEEEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 57899999999876 6666654 58999999997532 3567788999999999998876542
Q ss_pred ----CCCceEEEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHH
Q psy6053 236 ----KHLELFVHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEA 311 (614)
Q Consensus 236 ----~~~k~~V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~ 311 (614)
+.-.++|++||..+..... ....|+.||+..+.+.+..
T Consensus 147 ~~~~~~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~~~~~l 188 (277)
T 3tsc_A 147 IIEGGRGGSIILISSAAGMKMQP--------------------------------------FMIHYTASKHAVTGLARAF 188 (277)
T ss_dssp HHHHTSCEEEEEECCGGGTSCCS--------------------------------------SCHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCCCEEEEEccHhhCCCCC--------------------------------------CchhhHHHHHHHHHHHHHH
Confidence 1245899999987643210 0147999999999888776
Q ss_pred hh----CCCCEEEeecceeecccCCCCccccCCCCchHHHHHHHhcC-ceeeEeeCCCccccceeHHHHHHHHHHHHHhh
Q psy6053 312 MN----NGMPCLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKG-VIRTMFCDNTGYADFLPVDITINGIFVAIWAY 386 (614)
Q Consensus 312 ~~----~glp~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g-~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~ 386 (614)
+. +|+++..++||.|..+.... ............. ......... ...-+...+|+|++++.++...
T Consensus 189 a~e~~~~gi~vn~v~PG~v~T~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~-~p~r~~~pedvA~~v~~L~s~~ 259 (277)
T 3tsc_A 189 AAELGKHSIRVNSVHPGPVNTPMGSG--------DMVTAVGQAMETNPQLSHVLTPF-LPDWVAEPEDIADTVCWLASDE 259 (277)
T ss_dssp HHHHGGGTEEEEEEEESSBSSGGGSH--------HHHHHHHHHHHTCGGGTTTTCCS-SSCSCBCHHHHHHHHHHHHSGG
T ss_pred HHHhCccCeEEEEEEeCCCcCCcccc--------hhhhhhhhcccccHHHHHHhhhc-cCCCCCCHHHHHHHHHHHhCcc
Confidence 54 58999999999986653210 0000011111000 000000011 1113778999999999988654
Q ss_pred hhcCCCCccEEEeccC
Q psy6053 387 LSQKEHRQSIVHLTSS 402 (614)
Q Consensus 387 ~~~~~~~~~vyni~~~ 402 (614)
.. -..+.++++.++
T Consensus 260 ~~--~itG~~i~vdGG 273 (277)
T 3tsc_A 260 SR--KVTAAQIPVDQG 273 (277)
T ss_dssp GT--TCCSCEEEESTT
T ss_pred cc--CCcCCEEeeCCC
Confidence 32 136889998877
No 215
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=99.71 E-value=2e-17 Score=165.84 Aligned_cols=234 Identities=11% Similarity=-0.055 Sum_probs=143.3
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCCCC
Q psy6053 103 KTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAEAD 182 (614)
Q Consensus 103 ~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~~~ 182 (614)
|+|+||||||+||++++++|++.|++ |+++.|+.... . . .+.+|++++
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~G~~---V~~~~r~~~~~-------------------------~-~---~~~~Dl~~~ 49 (257)
T 1fjh_A 2 SIIVISGCATGIGAATRKVLEAAGHQ---IVGIDIRDAEV-------------------------I-A---DLSTAEGRK 49 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESSSSSE-------------------------E-C---CTTSHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEeCCchhh-------------------------c-c---ccccCCCCH
Confidence 68999999999999999999999875 88899975431 0 1 156788775
Q ss_pred CCCCCHHHHHHHhc----cccEEEEcccccChhHHHHHHHHHhHHHHHHHHHHHHHc---CCCceEEEEeCceeccCCcc
Q psy6053 183 ELAIKESDRQLLAS----EVDIMIHGAATIRFDEALKKAVLLNTRGTKMMLSLAKEM---KHLELFVHISTAYCHLQEKV 255 (614)
Q Consensus 183 ~lGLs~~~~~~l~~----~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~V~vST~~~~~~~~~ 255 (614)
+ +++.+++ ++|++||+||......+++..+++|+.|+.++++++... .+..++|++||..+......
T Consensus 50 ~------~v~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~ 123 (257)
T 1fjh_A 50 Q------AIADVLAKCSKGMDGLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFD 123 (257)
T ss_dssp H------HHHHHHTTCTTCCSEEEECCCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGG
T ss_pred H------HHHHHHHHhCCCCCEEEECCCCCCCcccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccc
Confidence 4 6777765 459999999986534567889999999999999988642 34579999999976522110
Q ss_pred cccccCCCCCChhHHHHHHhhcchhHHhhhhhh-hcCCCCCchhhhHHHHHHHHHHHhh----CCCCEEEeecceeeccc
Q psy6053 256 LYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKE-FLGEFPNSYAYTKCLSEGLVVEAMN----NGMPCLMLRPSIIIPVW 330 (614)
Q Consensus 256 i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~-~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp~~IvRp~~I~g~~ 330 (614)
. + +..+.. ..-+.+........ ........|+.||...|.+++..+. .|+++++++||.|.++.
T Consensus 124 ~-------~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 192 (257)
T 1fjh_A 124 K-------N-PLALAL---EAGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPL 192 (257)
T ss_dssp G-------C-TTHHHH---HHTCHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC-----
T ss_pred c-------c-hhhhhh---cccchhhhhhhhhcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcc
Confidence 0 0 000100 00011111100000 0000125799999999998877654 58999999999987654
Q ss_pred CCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEeccC
Q psy6053 331 REPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLTSS 402 (614)
Q Consensus 331 ~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~~~ 402 (614)
.... . ........... + ......+.+++|+|++++.++..... ...++++++.++
T Consensus 193 ~~~~-------~-~~~~~~~~~~~----~---~~~~~~~~~~~dvA~~~~~l~~~~~~--~~tG~~~~vdgG 247 (257)
T 1fjh_A 193 LQAG-------L-QDPRYGESIAK----F---VPPMGRRAEPSEMASVIAFLMSPAAS--YVHGAQIVIDGG 247 (257)
T ss_dssp ----------------------------C---CCSTTSCCCTHHHHHHHHHHTSGGGT--TCCSCEEEESTT
T ss_pred chhh-------c-cchhHHHHHHh----c---ccccCCCCCHHHHHHHHHHHhCchhc--CCcCCEEEECCC
Confidence 2210 0 00000000000 0 01112368899999999998865431 136788988877
No 216
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=99.71 E-value=5.6e-16 Score=158.08 Aligned_cols=240 Identities=12% Similarity=0.063 Sum_probs=158.3
Q ss_pred cccccCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCc----------CHHHHHHHHHhChhhHHhhhhcc
Q psy6053 96 IGETFTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGK----------NARQRIEELFASPLFNLLKSVHG 165 (614)
Q Consensus 96 i~~~~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~----------~~~~Rl~~~~~~~~f~~l~~~~p 165 (614)
+...+++|+++||||+|+||++++++|++.|.+ |+++.|++... ...+++++..+ .++
T Consensus 5 m~~~l~~k~~lVTGas~gIG~aia~~la~~G~~---V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~---- 72 (286)
T 3uve_A 5 MTGRVEGKVAFVTGAARGQGRSHAVRLAQEGAD---IIAVDICKPIRAGVVDTAIPASTPEDLAETAD-----LVK---- 72 (286)
T ss_dssp -CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCE---EEEEECCSCSBTTBCCCSSCCCCHHHHHHHHH-----HHH----
T ss_pred CCcccCCCEEEEeCCCchHHHHHHHHHHHCCCe---EEEEeccccccccccccccccCCHHHHHHHHH-----HHh----
Confidence 334577999999999999999999999999876 88888863211 11344443321 111
Q ss_pred ccccCeEEEEeCCCCCCCCCCCHHHHHHHhc-------cccEEEEcccccCh--------hHHHHHHHHHhHHHHHHHHH
Q psy6053 166 QKIIDKVLPISGDAEADELAIKESDRQLLAS-------EVDIMIHGAATIRF--------DEALKKAVLLNTRGTKMMLS 230 (614)
Q Consensus 166 ~~~~~~v~~v~gDl~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~--------~~~~~~~~~~Nv~gt~~ll~ 230 (614)
. ...++.++.+|+++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++
T Consensus 73 ~-~~~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~ 145 (286)
T 3uve_A 73 G-HNRRIVTAEVDVRDYD------ALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVK 145 (286)
T ss_dssp T-TTCCEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred h-cCCceEEEEcCCCCHH------HHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHH
Confidence 1 3357999999999876 6666654 68999999996431 35677889999999999998
Q ss_pred HHHHc----CCCceEEEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHH
Q psy6053 231 LAKEM----KHLELFVHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEG 306 (614)
Q Consensus 231 la~~~----~~~k~~V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~ 306 (614)
.+... +.-.++|++||..+..... ....|+.||+..+.
T Consensus 146 ~~~~~~~~~~~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~ 187 (286)
T 3uve_A 146 AGVPHMIAGGRGGSIILTSSVGGLKAYP--------------------------------------HTGHYVAAKHGVVG 187 (286)
T ss_dssp HHHHHHHHHTSCEEEEEECCGGGTSCCT--------------------------------------TCHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCcEEEEECchhhccCCC--------------------------------------CccHHHHHHHHHHH
Confidence 87642 1245899999986542210 01579999998888
Q ss_pred HHHHHhh----CCCCEEEeecceeecccCCCCcc---ccCCC--CchHHHHHHHhcCceeeEeeCCCccccceeHHHHHH
Q psy6053 307 LVVEAMN----NGMPCLMLRPSIIIPVWREPLPG---WTDNI--NGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITIN 377 (614)
Q Consensus 307 lv~~~~~----~glp~~IvRp~~I~g~~~~p~~g---w~d~~--~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~ 377 (614)
+.+..+. +|+++..++||.|..+....... +.... ..+.... ..... .. .....+...+|+|+
T Consensus 188 ~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~------~~-~~p~r~~~p~dvA~ 259 (286)
T 3uve_A 188 LMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMA-PICQM------FH-TLPIPWVEPIDISN 259 (286)
T ss_dssp HHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHH-HHHHT------TC-SSSCSCBCHHHHHH
T ss_pred HHHHHHHHhcccCeEEEEEecCcccCCcccccchhhhccccccccchhhHH-HHHHh------hh-ccCCCcCCHHHHHH
Confidence 8876654 58999999999997654321000 00000 0111110 00000 00 01135678999999
Q ss_pred HHHHHHHhhhhcCCCCccEEEeccC
Q psy6053 378 GIFVAIWAYLSQKEHRQSIVHLTSS 402 (614)
Q Consensus 378 aii~~~~~~~~~~~~~~~vyni~~~ 402 (614)
+++.++..... -..++++++.+|
T Consensus 260 ~v~fL~s~~a~--~itG~~i~vdGG 282 (286)
T 3uve_A 260 AVLFFASDEAR--YITGVTLPIDAG 282 (286)
T ss_dssp HHHHHHSGGGT--TCCSCEEEESTT
T ss_pred HHHHHcCcccc--CCcCCEEeECCc
Confidence 99998865432 136889999877
No 217
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=99.71 E-value=3.6e-17 Score=165.72 Aligned_cols=196 Identities=19% Similarity=0.203 Sum_probs=140.1
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
+++|+|+||||||+||++++++|++.|.+ |+++.|... +++++.+ .++. ...++.++.+|+
T Consensus 29 l~~k~vlITGasggIG~~la~~L~~~G~~---V~~~~r~~~------~~~~~~~-----~l~~-----~~~~~~~~~~Dl 89 (272)
T 1yb1_A 29 VTGEIVLITGAGHGIGRLTAYEFAKLKSK---LVLWDINKH------GLEETAA-----KCKG-----LGAKVHTFVVDC 89 (272)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCHH------HHHHHHH-----HHHH-----TTCCEEEEECCT
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCE---EEEEEcCHH------HHHHHHH-----HHHh-----cCCeEEEEEeeC
Confidence 67899999999999999999999999875 888988642 2222111 1111 224789999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHHc---CCCceEE
Q psy6053 180 EADELAIKESDRQLLAS-------EVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKEM---KHLELFV 242 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~V 242 (614)
++++ +++.+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+... .+..++|
T Consensus 90 ~~~~------~v~~~~~~~~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv 163 (272)
T 1yb1_A 90 SNRE------DIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIV 163 (272)
T ss_dssp TCHH------HHHHHHHHHHHHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred CCHH------HHHHHHHHHHHHCCCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEE
Confidence 9865 6666654 68999999997532 2456778999999988877766431 3668999
Q ss_pred EEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh-------CC
Q psy6053 243 HISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN-------NG 315 (614)
Q Consensus 243 ~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~-------~g 315 (614)
++||..+..... + ...|+.||+..|.+++.... .|
T Consensus 164 ~isS~~~~~~~~--------------------------------~------~~~Y~~sK~a~~~l~~~la~e~~~~~~~g 205 (272)
T 1yb1_A 164 TVASAAGHVSVP--------------------------------F------LLAYCSSKFAAVGFHKTLTDELAALQITG 205 (272)
T ss_dssp EECCCC-CCCHH--------------------------------H------HHHHHHHHHHHHHHHHHHHHHHHHTTCTT
T ss_pred EEechhhcCCCC--------------------------------C------chhHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 999987643210 0 15799999999988876544 28
Q ss_pred CCEEEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhh
Q psy6053 316 MPCLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAY 386 (614)
Q Consensus 316 lp~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~ 386 (614)
++++++|||.|.++... . .. .....+++++|+|++++.++...
T Consensus 206 i~v~~v~Pg~v~t~~~~-------~--~~-------------------~~~~~~~~~~dva~~i~~~~~~~ 248 (272)
T 1yb1_A 206 VKTTCLCPNFVNTGFIK-------N--PS-------------------TSLGPTLEPEEVVNRLMHGILTE 248 (272)
T ss_dssp EEEEEEEETHHHHCSTT-------C--TH-------------------HHHCCCCCHHHHHHHHHHHHHTT
T ss_pred eEEEEEeCCcccCCccc-------c--cc-------------------ccccCCCCHHHHHHHHHHHHHcC
Confidence 99999999988665311 0 00 01124678999999999988653
No 218
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=99.71 E-value=2.5e-16 Score=159.75 Aligned_cols=221 Identities=11% Similarity=0.049 Sum_probs=152.8
Q ss_pred cCCcEEEEeccc--ccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeC
Q psy6053 100 FTGKTLFMTGAS--GFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISG 177 (614)
Q Consensus 100 ~~~~~VLITGaT--GFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~g 177 (614)
+++|+|+||||+ |+||++++++|++.|.+ |+++.|+... .+.++++.+ ...++.++.+
T Consensus 4 l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~---V~~~~r~~~~---~~~~~~l~~--------------~~~~~~~~~~ 63 (275)
T 2pd4_A 4 LKGKKGLIVGVANNKSIAYGIAQSCFNQGAT---LAFTYLNESL---EKRVRPIAQ--------------ELNSPYVYEL 63 (275)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHHTTTCE---EEEEESSTTT---HHHHHHHHH--------------HTTCCCEEEC
T ss_pred CCCCEEEEECCCCCCcHHHHHHHHHHHCCCE---EEEEeCCHHH---HHHHHHHHH--------------hcCCcEEEEc
Confidence 568999999999 99999999999999875 8899997642 233333311 1123678999
Q ss_pred CCCCCCCCCCHHHHHHHhc-------cccEEEEcccccCh-----------hHHHHHHHHHhHHHHHHHHHHHHHc-CCC
Q psy6053 178 DAEADELAIKESDRQLLAS-------EVDIMIHGAATIRF-----------DEALKKAVLLNTRGTKMMLSLAKEM-KHL 238 (614)
Q Consensus 178 Dl~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~-----------~~~~~~~~~~Nv~gt~~ll~la~~~-~~~ 238 (614)
|+++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++++... .+-
T Consensus 64 D~~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~ 137 (275)
T 2pd4_A 64 DVSKEE------HFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNG 137 (275)
T ss_dssp CTTCHH------HHHHHHHHHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE
T ss_pred CCCCHH------HHHHHHHHHHHHcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccC
Confidence 999865 6666654 67999999996532 3457788999999999999999763 112
Q ss_pred ceEEEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----C
Q psy6053 239 ELFVHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----N 314 (614)
Q Consensus 239 k~~V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~ 314 (614)
.++|++||..+.... | ....|+.||+..+.+.+..+. .
T Consensus 138 g~iv~isS~~~~~~~----------~----------------------------~~~~Y~asK~a~~~~~~~la~e~~~~ 179 (275)
T 2pd4_A 138 ASVLTLSYLGSTKYM----------A----------------------------HYNVMGLAKAALESAVRYLAVDLGKH 179 (275)
T ss_dssp EEEEEEECGGGTSBC----------T----------------------------TCHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CEEEEEecchhcCCC----------C----------------------------CchhhHHHHHHHHHHHHHHHHHhhhc
Confidence 589999997653211 0 014799999999998877654 5
Q ss_pred CCCEEEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCc
Q psy6053 315 GMPCLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQ 394 (614)
Q Consensus 315 glp~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~ 394 (614)
|+++++++||.|.++.... ..........+.... + ...+...+|+|++++.++..... ...+
T Consensus 180 gi~v~~v~PG~v~T~~~~~-------~~~~~~~~~~~~~~~-------p--~~~~~~p~dva~~~~~l~s~~~~--~~tG 241 (275)
T 2pd4_A 180 HIRVNALSAGPIRTLASSG-------IADFRMILKWNEINA-------P--LRKNVSLEEVGNAGMYLLSSLSS--GVSG 241 (275)
T ss_dssp TCEEEEEEECCCCCTTGGG-------STTHHHHHHHHHHHS-------T--TSSCCCHHHHHHHHHHHHSGGGT--TCCS
T ss_pred CeEEEEEeeCccccchhhh-------ccccHHHHHHHHhcC-------C--cCCCCCHHHHHHHHHHHhCcccc--CCCC
Confidence 8999999999997753221 111111221111110 0 01256789999999998864331 1367
Q ss_pred cEEEeccC
Q psy6053 395 SIVHLTSS 402 (614)
Q Consensus 395 ~vyni~~~ 402 (614)
.++++.++
T Consensus 242 ~~~~vdgg 249 (275)
T 2pd4_A 242 EVHFVDAG 249 (275)
T ss_dssp CEEEESTT
T ss_pred CEEEECCC
Confidence 78888776
No 219
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=99.71 E-value=8.2e-17 Score=162.26 Aligned_cols=223 Identities=13% Similarity=0.097 Sum_probs=148.1
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
+++|+++||||+|+||++++++|++.|.+ |+++.|........+.+.+.+ + . ...++.++.+|+
T Consensus 9 l~~k~vlVTGas~GIG~aia~~la~~G~~---V~~~~r~~~~~~~~~~~~~~~--------~----~-~~~~~~~~~~Dv 72 (262)
T 3ksu_A 9 LKNKVIVIAGGIKNLGALTAKTFALESVN---LVLHYHQAKDSDTANKLKDEL--------E----D-QGAKVALYQSDL 72 (262)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHTTSSCE---EEEEESCGGGHHHHHHHHHHH--------H----T-TTCEEEEEECCC
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCE---EEEEecCccCHHHHHHHHHHH--------H----h-cCCcEEEEECCC
Confidence 57899999999999999999999999876 888888654322222222211 1 1 335799999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHHc-CCCceEEEE
Q psy6053 180 EADELAIKESDRQLLAS-------EVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKEM-KHLELFVHI 244 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~-~~~k~~V~v 244 (614)
++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++.+... .+..++|++
T Consensus 73 ~d~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~i 146 (262)
T 3ksu_A 73 SNEE------EVAKLFDFAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITI 146 (262)
T ss_dssp CSHH------HHHHHHHHHHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEE
Confidence 9976 6766665 68999999996431 3567788999999999999998862 234689999
Q ss_pred eCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCCEEE
Q psy6053 245 STAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMPCLM 320 (614)
Q Consensus 245 ST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp~~I 320 (614)
||..+..... ....|+.||+..+.+.+..+. +|+.+..
T Consensus 147 sS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~ 188 (262)
T 3ksu_A 147 ATSLLAAYTG--------------------------------------FYSTYAGNKAPVEHYTRAASKELMKQQISVNA 188 (262)
T ss_dssp CCCHHHHHHC--------------------------------------CCCC-----CHHHHHHHHHHHHTTTTTCEEEE
T ss_pred echhhccCCC--------------------------------------CCchhHHHHHHHHHHHHHHHHHHHHcCcEEEE
Confidence 9986532210 125799999999988877665 5899999
Q ss_pred eecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEec
Q psy6053 321 LRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLT 400 (614)
Q Consensus 321 vRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~ 400 (614)
++||.|..+.... .... ... ...........+...+|+|++++.++.. .. -..++++++.
T Consensus 189 v~PG~v~T~~~~~-------~~~~-~~~---------~~~~~~~~~~r~~~pedvA~~v~~L~s~-~~--~itG~~i~vd 248 (262)
T 3ksu_A 189 IAPGPMDTSFFYG-------QETK-EST---------AFHKSQAMGNQLTKIEDIAPIIKFLTTD-GW--WINGQTIFAN 248 (262)
T ss_dssp EEECCCCTHHHHT-------CC----------------------CCCCSCCGGGTHHHHHHHHTT-TT--TCCSCEEEES
T ss_pred EeeCCCcCccccc-------cCch-HHH---------HHHHhcCcccCCCCHHHHHHHHHHHcCC-CC--CccCCEEEEC
Confidence 9999885442110 0000 000 0001111223467889999999988865 21 2368899988
Q ss_pred cC
Q psy6053 401 SS 402 (614)
Q Consensus 401 ~~ 402 (614)
++
T Consensus 249 Gg 250 (262)
T 3ksu_A 249 GG 250 (262)
T ss_dssp TT
T ss_pred CC
Confidence 77
No 220
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=99.71 E-value=2e-16 Score=159.81 Aligned_cols=203 Identities=13% Similarity=0.137 Sum_probs=143.4
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
..+|+||||||+|+||++++++|++.|.+ |+++.|.. +++++. ...++.++.+|+
T Consensus 14 ~~~k~vlVTGas~gIG~aia~~l~~~G~~---V~~~~r~~------~~~~~~----------------~~~~~~~~~~Dv 68 (266)
T 3p19_A 14 SMKKLVVITGASSGIGEAIARRFSEEGHP---LLLLARRV------ERLKAL----------------NLPNTLCAQVDV 68 (266)
T ss_dssp -CCCEEEEESTTSHHHHHHHHHHHHTTCC---EEEEESCH------HHHHTT----------------CCTTEEEEECCT
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEECCH------HHHHHh----------------hcCCceEEEecC
Confidence 56799999999999999999999999987 88888863 233221 234688999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHHc---CCCceEE
Q psy6053 180 EADELAIKESDRQLLAS-------EVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKEM---KHLELFV 242 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~V 242 (614)
++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++.+... .+..++|
T Consensus 69 ~d~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV 142 (266)
T 3p19_A 69 TDKY------TFDTAITRAEKIYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTII 142 (266)
T ss_dssp TCHH------HHHHHHHHHHHHHCSEEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred CCHH------HHHHHHHHHHHHCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEE
Confidence 9865 6666665 78999999997532 3567788999999999977766421 3567999
Q ss_pred EEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCCE
Q psy6053 243 HISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMPC 318 (614)
Q Consensus 243 ~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp~ 318 (614)
++||..+..... ....|+.||+..+.+.+..+. .|+++
T Consensus 143 ~isS~~~~~~~~--------------------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v 184 (266)
T 3p19_A 143 NISSIAGKKTFP--------------------------------------DHAAYCGTKFAVHAISENVREEVAASNVRV 184 (266)
T ss_dssp EECCGGGTSCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEE
T ss_pred EEcChhhCCCCC--------------------------------------CCchHHHHHHHHHHHHHHHHHHhcccCcEE
Confidence 999987643210 015799999999888876654 58999
Q ss_pred EEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhh
Q psy6053 319 LMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYL 387 (614)
Q Consensus 319 ~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~ 387 (614)
..++||.|.++... ..... ........... ....++.++|+|++++.++..+.
T Consensus 185 n~v~PG~v~T~~~~-------~~~~~-~~~~~~~~~~~--------~~~r~~~pedvA~av~~l~~~~~ 237 (266)
T 3p19_A 185 MTIAPSAVKTELLS-------HTTSQ-QIKDGYDAWRV--------DMGGVLAADDVARAVLFAYQQPQ 237 (266)
T ss_dssp EEEEECSBSSSGGG-------GCSCH-HHHHHHHHHHH--------HTTCCBCHHHHHHHHHHHHHSCT
T ss_pred EEEeeCccccchhh-------cccch-hhhHHHHhhcc--------cccCCCCHHHHHHHHHHHHcCCC
Confidence 99999999765321 11111 11111100000 11236789999999999987654
No 221
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=99.71 E-value=1.4e-16 Score=159.68 Aligned_cols=206 Identities=8% Similarity=0.053 Sum_probs=135.9
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
+++|+|+||||+|+||++++++|++.|.+ |+++.|+.... +.+.+. ++. ...++.++.+|+
T Consensus 5 ~~~k~vlVTGas~GIG~aia~~l~~~G~~---V~~~~r~~~~~---~~~~~~--------~~~-----~~~~~~~~~~Dv 65 (252)
T 3h7a_A 5 PRNATVAVIGAGDYIGAEIAKKFAAEGFT---VFAGRRNGEKL---APLVAE--------IEA-----AGGRIVARSLDA 65 (252)
T ss_dssp CCSCEEEEECCSSHHHHHHHHHHHHTTCE---EEEEESSGGGG---HHHHHH--------HHH-----TTCEEEEEECCT
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCE---EEEEeCCHHHH---HHHHHH--------HHh-----cCCeEEEEECcC
Confidence 46899999999999999999999999875 88899965332 112111 111 235799999999
Q ss_pred CCCCCCCCHHHHHHHhc------cccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHHc---CCCceEEE
Q psy6053 180 EADELAIKESDRQLLAS------EVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKEM---KHLELFVH 243 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~V~ 243 (614)
++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++.+... .+..++|+
T Consensus 66 ~~~~------~v~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~ 139 (252)
T 3h7a_A 66 RNED------EVTAFLNAADAHAPLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFF 139 (252)
T ss_dssp TCHH------HHHHHHHHHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred CCHH------HHHHHHHHHHhhCCceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEE
Confidence 9976 6777665 67999999996432 3567788999999999988877431 24468999
Q ss_pred EeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCCE-
Q psy6053 244 ISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMPC- 318 (614)
Q Consensus 244 vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp~- 318 (614)
+||..+.... | ....|+.||+..+.+.+..+. .|+.+
T Consensus 140 isS~~~~~~~----------~----------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~ 181 (252)
T 3h7a_A 140 TGATASLRGG----------S----------------------------GFAAFASAKFGLRAVAQSMARELMPKNIHVA 181 (252)
T ss_dssp EEEGGGTCCC----------T----------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred ECCHHHcCCC----------C----------------------------CCccHHHHHHHHHHHHHHHHHHhhhcCCEEE
Confidence 9998653221 0 015799999998888876654 58999
Q ss_pred EEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhh
Q psy6053 319 LMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYL 387 (614)
Q Consensus 319 ~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~ 387 (614)
.++.||.|..+..... . .... . . ........ +...+|+|++++.++..+.
T Consensus 182 n~v~PG~v~T~~~~~~-------~--~~~~----~----~-~~~~~~~~-~~~pedvA~~~~~l~s~~~ 231 (252)
T 3h7a_A 182 HLIIDSGVDTAWVRER-------R--EQMF----G----K-DALANPDL-LMPPAAVAGAYWQLYQQPK 231 (252)
T ss_dssp EEEEC----------------------------------------------CCHHHHHHHHHHHHHCCG
T ss_pred EEecCCccCChhhhcc-------c--hhhh----h----h-hhhcCCcc-CCCHHHHHHHHHHHHhCch
Confidence 8999998865432110 0 0000 0 0 00111112 7899999999999987554
No 222
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=99.71 E-value=6.5e-17 Score=166.10 Aligned_cols=235 Identities=15% Similarity=0.113 Sum_probs=156.6
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
+++|+|+||||||+||++++++|++.|.+ |+++.|+. +++++..+ .+..... ...++.++.+|+
T Consensus 24 l~~k~vlVTGas~gIG~aia~~L~~~G~~---V~~~~r~~------~~~~~~~~-----~l~~~~~--~~~~~~~~~~Dv 87 (297)
T 1xhl_A 24 FSGKSVIITGSSNGIGRSAAVIFAKEGAQ---VTITGRNE------DRLEETKQ-----QILKAGV--PAEKINAVVADV 87 (297)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCE---EEEEESCH------HHHHHHHH-----HHHHTTC--CGGGEEEEECCT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEeCCH------HHHHHHHH-----HHHhcCC--CCceEEEEecCC
Confidence 56899999999999999999999999876 88888863 22222111 1111000 112689999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcccccC-----h----hHHHHHHHHHhHHHHHHHHHHHHHc---CCCce
Q psy6053 180 EADELAIKESDRQLLAS-------EVDIMIHGAATIR-----F----DEALKKAVLLNTRGTKMMLSLAKEM---KHLEL 240 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~-----~----~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~ 240 (614)
++++ +++.+++ ++|++||+||... + .+.++..+++|+.|+.++++.+... .+ .+
T Consensus 88 ~d~~------~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~ 160 (297)
T 1xhl_A 88 TEAS------GQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GE 160 (297)
T ss_dssp TSHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CE
T ss_pred CCHH------HHHHHHHHHHHhcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CE
Confidence 9875 6666655 6899999999642 2 3457788999999999999888652 23 69
Q ss_pred EEEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCC
Q psy6053 241 FVHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGM 316 (614)
Q Consensus 241 ~V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~gl 316 (614)
+|++||..+..... | ....|+.||+..+.+.+..+. .|+
T Consensus 161 IV~isS~~~~~~~~---------~----------------------------~~~~Y~asKaa~~~l~~~la~el~~~gI 203 (297)
T 1xhl_A 161 IVNVSSIVAGPQAH---------S----------------------------GYPYYACAKAALDQYTRCTAIDLIQHGV 203 (297)
T ss_dssp EEEECCGGGSSSCC---------T----------------------------TSHHHHHHHHHHHHHHHHHHHHHGGGTC
T ss_pred EEEEcCchhccCCC---------C----------------------------CcchHHHHHHHHHHHHHHHHHHhcccCe
Confidence 99999986543210 0 014799999999988877653 599
Q ss_pred CEEEeecceeecccCCCCccccCCCCchH-----HHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhh-hhcC
Q psy6053 317 PCLMLRPSIIIPVWREPLPGWTDNINGPT-----GLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAY-LSQK 390 (614)
Q Consensus 317 p~~IvRp~~I~g~~~~p~~gw~d~~~g~~-----~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~-~~~~ 390 (614)
+++++|||.|.++..... . ..... ......... .....+...+|+|++++.++... ..
T Consensus 204 ~v~~v~PG~v~T~~~~~~---~--~~~~~~~~~~~~~~~~~~~---------~p~~r~~~pedvA~~v~~l~s~~~~~-- 267 (297)
T 1xhl_A 204 RVNSVSPGAVATGFMGAM---G--LPETASDKLYSFIGSRKEC---------IPVGHCGKPEEIANIIVFLADRNLSS-- 267 (297)
T ss_dssp EEEEEEECCBCSSHHHHT---T--CCHHHHHHHHHHHHHCTTT---------CTTSSCBCHHHHHHHHHHHHCHHHHT--
T ss_pred EEEEEeeCCCcCcccccc---c--cccccccchHHHHHHHHhc---------CCCCCCcCHHHHHHHHHHHhCCcccC--
Confidence 999999999976532100 0 00000 111111111 01124788999999999888654 21
Q ss_pred CCCccEEEeccCCcccccHHHH
Q psy6053 391 EHRQSIVHLTSSQEWQVSWQEI 412 (614)
Q Consensus 391 ~~~~~vyni~~~~~~~it~~e~ 412 (614)
-..+.++++.++ ..+...+.
T Consensus 268 ~itG~~i~vdGG--~~~~~~~~ 287 (297)
T 1xhl_A 268 YIIGQSIVADGG--STLVMGMQ 287 (297)
T ss_dssp TCCSCEEEESTT--GGGCCGGG
T ss_pred CccCcEEEECCC--cccccccc
Confidence 136789999887 54554443
No 223
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=99.71 E-value=1.9e-16 Score=160.29 Aligned_cols=227 Identities=15% Similarity=0.117 Sum_probs=153.0
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
+++|+|+||||||+||++++++|++.|++ |+++.|.. ++++++.+ ...++.++.+|+
T Consensus 7 l~~k~vlVTGas~gIG~~ia~~l~~~G~~---V~~~~r~~------~~~~~~~~--------------~~~~~~~~~~Dv 63 (270)
T 1yde_A 7 YAGKVVVVTGGGRGIGAGIVRAFVNSGAR---VVICDKDE------SGGRALEQ--------------ELPGAVFILCDV 63 (270)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTCE---EEEEESCH------HHHHHHHH--------------HCTTEEEEECCT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEeCCH------HHHHHHHH--------------HhcCCeEEEcCC
Confidence 57899999999999999999999999875 88888863 22222211 113478899999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcccccCh--------hHHHHHHHHHhHHHHHHHHHHHHHc--CCCceEE
Q psy6053 180 EADELAIKESDRQLLAS-------EVDIMIHGAATIRF--------DEALKKAVLLNTRGTKMMLSLAKEM--KHLELFV 242 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~--------~~~~~~~~~~Nv~gt~~ll~la~~~--~~~k~~V 242 (614)
++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++++... .+..++|
T Consensus 64 ~d~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv 137 (270)
T 1yde_A 64 TQED------DVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVI 137 (270)
T ss_dssp TSHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEE
Confidence 9865 6666655 68999999996431 2457788999999999999988641 1247999
Q ss_pred EEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCCE
Q psy6053 243 HISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMPC 318 (614)
Q Consensus 243 ~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp~ 318 (614)
++||..+.... | ....|+.||+..|.+.+..+. +|+++
T Consensus 138 ~isS~~~~~~~----------~----------------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v 179 (270)
T 1yde_A 138 NISSLVGAIGQ----------A----------------------------QAVPYVATKGAVTAMTKALALDESPYGVRV 179 (270)
T ss_dssp EECCHHHHHCC----------T----------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEE
T ss_pred EEcCccccCCC----------C----------------------------CCcccHHHHHHHHHHHHHHHHHhhhhCcEE
Confidence 99998543211 0 014799999999998887653 58999
Q ss_pred EEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEE
Q psy6053 319 LMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVH 398 (614)
Q Consensus 319 ~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyn 398 (614)
.++|||.|.++..... ......+...+....... ....+...+|+|++++.++.... -..+++++
T Consensus 180 n~v~Pg~v~t~~~~~~---~~~~~~~~~~~~~~~~~~---------p~~r~~~p~dva~~v~~L~s~~~---~itG~~i~ 244 (270)
T 1yde_A 180 NCISPGNIWTPLWEEL---AALMPDPRASIREGMLAQ---------PLGRMGQPAEVGAAAVFLASEAN---FCTGIELL 244 (270)
T ss_dssp EEEEECSBCCHHHHHH---HTTSSSHHHHHHHHHHTS---------TTSSCBCHHHHHHHHHHHHHHCT---TCCSCEEE
T ss_pred EEEEeCccccchhhhh---hhcccchHHHHHHHhhcC---------CCCCCcCHHHHHHHHHHHcccCC---CcCCCEEE
Confidence 9999999987632100 000011111111111100 01125678999999988876521 23678999
Q ss_pred eccCCcccccHH
Q psy6053 399 LTSSQEWQVSWQ 410 (614)
Q Consensus 399 i~~~~~~~it~~ 410 (614)
+.++ ..+.+.
T Consensus 245 vdGG--~~~~~~ 254 (270)
T 1yde_A 245 VTGG--AELGYG 254 (270)
T ss_dssp ESTT--TTSCC-
T ss_pred ECCC--eecccC
Confidence 9887 444443
No 224
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=99.71 E-value=1e-16 Score=162.87 Aligned_cols=209 Identities=19% Similarity=0.198 Sum_probs=140.8
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
+++|+||||||||+||++++++|++.|.+ |+++.|+. ++++++.+ .++... ...++.++.+|+
T Consensus 30 l~~k~vlVTGasggIG~~la~~l~~~G~~---V~~~~r~~------~~~~~~~~-----~~~~~~---~~~~~~~~~~Dl 92 (279)
T 1xg5_A 30 WRDRLALVTGASGGIGAAVARALVQQGLK---VVGCARTV------GNIEELAA-----ECKSAG---YPGTLIPYRCDL 92 (279)
T ss_dssp GTTCEEEEESTTSHHHHHHHHHHHHTTCE---EEEEESCH------HHHHHHHH-----HHHHTT---CSSEEEEEECCT
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCE---EEEEECCh------HHHHHHHH-----HHHhcC---CCceEEEEEecC
Confidence 67899999999999999999999999875 88899863 22222111 111111 125788999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcccccCh-------hHHHHHHHHHhHHH----HHHHHHHHHHcCCC--c
Q psy6053 180 EADELAIKESDRQLLAS-------EVDIMIHGAATIRF-------DEALKKAVLLNTRG----TKMMLSLAKEMKHL--E 239 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~g----t~~ll~la~~~~~~--k 239 (614)
++++ +++.+++ ++|+|||+||.... .+.++..+++|+.| ++.+++.+++. +. .
T Consensus 93 ~~~~------~v~~~~~~~~~~~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~-~~~~g 165 (279)
T 1xg5_A 93 SNEE------DILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKER-NVDDG 165 (279)
T ss_dssp TCHH------HHHHHHHHHHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCCSC
T ss_pred CCHH------HHHHHHHHHHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCCc
Confidence 9865 6666654 79999999996432 35677889999999 77778888773 54 7
Q ss_pred eEEEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHh------h
Q psy6053 240 LFVHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAM------N 313 (614)
Q Consensus 240 ~~V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~------~ 313 (614)
++|++||..+..... .+ ....|+.||+..|.+++... .
T Consensus 166 ~iv~isS~~~~~~~~--------~~----------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~~ 209 (279)
T 1xg5_A 166 HIININSMSGHRVLP--------LS----------------------------VTHFYSATKYAVTALTEGLRQELREAQ 209 (279)
T ss_dssp EEEEECCGGGTSCCS--------CG----------------------------GGHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred eEEEEcChhhcccCC--------CC----------------------------CCchhHHHHHHHHHHHHHHHHHHhhcC
Confidence 999999987642110 00 01579999999888776543 2
Q ss_pred CCCCEEEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhh
Q psy6053 314 NGMPCLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAY 386 (614)
Q Consensus 314 ~glp~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~ 386 (614)
.++++++++||.|.++... .... ..+.. .... .....++.++|+|++++.++..+
T Consensus 210 ~~i~v~~v~Pg~v~t~~~~---~~~~--~~~~~-~~~~------------~~~~~~~~~~dvA~~i~~l~~~~ 264 (279)
T 1xg5_A 210 THIRATCISPGVVETQFAF---KLHD--KDPEK-AAAT------------YEQMKCLKPEDVAEAVIYVLSTP 264 (279)
T ss_dssp CCCEEEEEEESCBCSSHHH---HHTT--TCHHH-HHHH------------HC---CBCHHHHHHHHHHHHHSC
T ss_pred CCeEEEEEecCcccchhhh---hhcc--cChhH-Hhhh------------cccccCCCHHHHHHHHHHHhcCC
Confidence 4899999999988654210 0000 00111 0000 01123678999999999988754
No 225
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=99.71 E-value=2.7e-16 Score=159.25 Aligned_cols=221 Identities=13% Similarity=0.125 Sum_probs=152.3
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
+++|+++||||+|+||++++++|++.|.+ |+++.|... +++++..+ .++ . ...++.++.+|+
T Consensus 29 l~gk~~lVTGas~GIG~aia~~la~~G~~---V~~~~~~~~-----~~~~~~~~-----~l~----~-~~~~~~~~~~Dv 90 (271)
T 3v2g_A 29 LAGKTAFVTGGSRGIGAAIAKRLALEGAA---VALTYVNAA-----ERAQAVVS-----EIE----Q-AGGRAVAIRADN 90 (271)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESSCH-----HHHHHHHH-----HHH----H-TTCCEEEEECCT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEeCCCH-----HHHHHHHH-----HHH----h-cCCcEEEEECCC
Confidence 57899999999999999999999999876 777766532 22222111 111 1 335789999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHHc-CCCceEEEE
Q psy6053 180 EADELAIKESDRQLLAS-------EVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKEM-KHLELFVHI 244 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~-~~~k~~V~v 244 (614)
++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++.+... .+..++|++
T Consensus 91 ~d~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~i 164 (271)
T 3v2g_A 91 RDAE------AIEQAIRETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITI 164 (271)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEE
Confidence 9876 6666665 78999999997432 3567788999999999999998763 345689999
Q ss_pred eCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCCEEE
Q psy6053 245 STAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMPCLM 320 (614)
Q Consensus 245 ST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp~~I 320 (614)
||..+.... .| ....|+.||+..+.+.+..+. +|+++..
T Consensus 165 sS~~~~~~~---------~~----------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~ 207 (271)
T 3v2g_A 165 GSNLAELVP---------WP----------------------------GISLYSASKAALAGLTKGLARDLGPRGITVNI 207 (271)
T ss_dssp CCGGGTCCC---------ST----------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEE
T ss_pred eChhhccCC---------CC----------------------------CchHHHHHHHHHHHHHHHHHHHhhhhCeEEEE
Confidence 997442110 00 015799999999888876654 5899999
Q ss_pred eecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEec
Q psy6053 321 LRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLT 400 (614)
Q Consensus 321 vRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~ 400 (614)
++||.|.++.....+. ... ...... ....+...+|+|++++.++..... -..++++++.
T Consensus 208 v~PG~v~T~~~~~~~~------~~~----~~~~~~---------~~~r~~~pedvA~~v~fL~s~~~~--~itG~~i~vd 266 (271)
T 3v2g_A 208 VHPGSTDTDMNPADGD------HAE----AQRERI---------ATGSYGEPQDIAGLVAWLAGPQGK--FVTGASLTID 266 (271)
T ss_dssp EEECSBCSSSSCSSCS------SHH----HHHHTC---------TTSSCBCHHHHHHHHHHHHSGGGT--TCCSCEEEES
T ss_pred EecCCCcCCcccccch------hHH----HHHhcC---------CCCCCCCHHHHHHHHHHHhCcccC--CccCCEEEeC
Confidence 9999997764322110 001 111110 112256789999999888854432 1368899887
Q ss_pred cC
Q psy6053 401 SS 402 (614)
Q Consensus 401 ~~ 402 (614)
+|
T Consensus 267 GG 268 (271)
T 3v2g_A 267 GG 268 (271)
T ss_dssp TT
T ss_pred cC
Confidence 76
No 226
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=99.71 E-value=1.5e-16 Score=163.60 Aligned_cols=216 Identities=14% Similarity=0.090 Sum_probs=141.1
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
+++|+||||||||+||++++++|++.|.+ |+++.|+. +++++..+ .++. ...++.++.+|+
T Consensus 29 l~gk~vlVTGas~gIG~~la~~l~~~G~~---V~~~~r~~------~~~~~~~~-----~l~~-----~~~~~~~~~~Dv 89 (301)
T 3tjr_A 29 FDGRAAVVTGGASGIGLATATEFARRGAR---LVLSDVDQ------PALEQAVN-----GLRG-----QGFDAHGVVCDV 89 (301)
T ss_dssp STTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCH------HHHHHHHH-----HHHH-----TTCCEEEEECCT
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEECCH------HHHHHHHH-----HHHh-----cCCceEEEEccC
Confidence 67899999999999999999999999875 88888864 22222211 1111 235789999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHHc----CCCceE
Q psy6053 180 EADELAIKESDRQLLAS-------EVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKEM----KHLELF 241 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~----~~~k~~ 241 (614)
++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++++... +...++
T Consensus 90 ~d~~------~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~i 163 (301)
T 3tjr_A 90 RHLD------EMVRLADEAFRLLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHI 163 (301)
T ss_dssp TCHH------HHHHHHHHHHHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEE
T ss_pred CCHH------HHHHHHHHHHHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEE
Confidence 9876 6666655 78999999996531 3556788999999999999987541 224689
Q ss_pred EEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCC
Q psy6053 242 VHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMP 317 (614)
Q Consensus 242 V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp 317 (614)
|++||..+.... | ....|+.||+..+.+.+..+. .|++
T Consensus 164 v~isS~~~~~~~----------~----------------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~ 205 (301)
T 3tjr_A 164 AFTASFAGLVPN----------A----------------------------GLGTYGVAKYGVVGLAETLAREVKPNGIG 205 (301)
T ss_dssp EEECCGGGTSCC----------T----------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred EEeCchhhcCCC----------C----------------------------CchHHHHHHHHHHHHHHHHHHHhcccCcE
Confidence 999998764321 0 015799999988887776554 5899
Q ss_pred EEEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhh
Q psy6053 318 CLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAY 386 (614)
Q Consensus 318 ~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~ 386 (614)
+++++||.|..+....... ....... .........+......++++++|||++++.++...
T Consensus 206 v~~v~PG~v~T~~~~~~~~-------~~~~~~~-~~~~~~~~~~~~~~~~~~~~pedvA~~i~~~l~~~ 266 (301)
T 3tjr_A 206 VSVLCPMVVETKLVSNSER-------IRGADYG-MSATPEGAFGPLPTQDESVSADDVARLTADAILAN 266 (301)
T ss_dssp EEEECCSCCCSSHHHHHHH-------HC-----------------------CCCHHHHHHHHHHHHHHT
T ss_pred EEEEECCcccccccccccc-------ccchhhc-cccChhhhccccccccCCCCHHHHHHHHHHHHhcC
Confidence 9999999885432100000 0000000 00000111122334456899999999999998764
No 227
>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A
Probab=99.71 E-value=1.1e-16 Score=159.90 Aligned_cols=209 Identities=11% Similarity=0.103 Sum_probs=145.8
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
+++|+|+||||||+||++++++|++.|.+ |+++.|..... ..+..+.+|+
T Consensus 13 l~~k~vlVTGas~gIG~~ia~~l~~~G~~---V~~~~r~~~~~---------------------------~~~~~~~~D~ 62 (247)
T 1uzm_A 13 FVSRSVLVTGGNRGIGLAIAQRLAADGHK---VAVTHRGSGAP---------------------------KGLFGVEVDV 62 (247)
T ss_dssp CCCCEEEETTTTSHHHHHHHHHHHHTTCE---EEEEESSSCCC---------------------------TTSEEEECCT
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEeCChHHH---------------------------HHhcCeeccC
Confidence 57899999999999999999999999865 88899975421 1122478999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHHc---CCCceEE
Q psy6053 180 EADELAIKESDRQLLAS-------EVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKEM---KHLELFV 242 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~V 242 (614)
++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++.+... .+..++|
T Consensus 63 ~~~~------~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv 136 (247)
T 1uzm_A 63 TDSD------AVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMI 136 (247)
T ss_dssp TCHH------HHHHHHHHHHHHHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEE
Confidence 9865 6666654 57999999997542 3567788999999999999887641 3567999
Q ss_pred EEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCCE
Q psy6053 243 HISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMPC 318 (614)
Q Consensus 243 ~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp~ 318 (614)
++||..+.... | ....|+.||+..|.+.+.... .|+++
T Consensus 137 ~isS~~~~~~~----------~----------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v 178 (247)
T 1uzm_A 137 FIGSVSGLWGI----------G----------------------------NQANYAASKAGVIGMARSIARELSKANVTA 178 (247)
T ss_dssp EECCCCC-------------------------------------------CCHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred EECCHhhccCC----------C----------------------------CChhHHHHHHHHHHHHHHHHHHhhhcCcEE
Confidence 99998653211 0 015799999988887776543 58999
Q ss_pred EEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEE
Q psy6053 319 LMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVH 398 (614)
Q Consensus 319 ~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyn 398 (614)
++++||.|.++... .. . .......... .....+.+.+|+|++++.++..... -..+++++
T Consensus 179 ~~v~PG~v~t~~~~-------~~-~-~~~~~~~~~~---------~p~~~~~~~~dvA~~~~~l~s~~~~--~~~G~~i~ 238 (247)
T 1uzm_A 179 NVVAPGYIDTDMTR-------AL-D-ERIQQGALQF---------IPAKRVGTPAEVAGVVSFLASEDAS--YISGAVIP 238 (247)
T ss_dssp EEEEECSBCCHHHH-------HS-C-HHHHHHHGGG---------CTTCSCBCHHHHHHHHHHHHSGGGT--TCCSCEEE
T ss_pred EEEEeCCCcccchh-------hc-C-HHHHHHHHhc---------CCCCCCcCHHHHHHHHHHHcCcccc--CCcCCEEE
Confidence 99999988654211 00 0 1111111110 0112368999999999988864331 13678999
Q ss_pred eccC
Q psy6053 399 LTSS 402 (614)
Q Consensus 399 i~~~ 402 (614)
+.++
T Consensus 239 vdgG 242 (247)
T 1uzm_A 239 VDGG 242 (247)
T ss_dssp ESTT
T ss_pred ECCC
Confidence 8877
No 228
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=99.71 E-value=3.4e-16 Score=160.42 Aligned_cols=222 Identities=9% Similarity=0.031 Sum_probs=154.7
Q ss_pred ccCCcEEEEeccccc--ccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEe
Q psy6053 99 TFTGKTLFMTGASGF--LGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPIS 176 (614)
Q Consensus 99 ~~~~~~VLITGaTGF--lG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~ 176 (614)
.+++|+|+||||+|+ ||++++++|++.|.+ |++..|... ..+.++++.+ ...++.++.
T Consensus 28 ~l~gk~~lVTGasg~~GIG~aia~~la~~G~~---V~~~~r~~~---~~~~~~~~~~--------------~~~~~~~~~ 87 (293)
T 3grk_A 28 LLQGKRGLILGVANNRSIAWGIAKAAREAGAE---LAFTYQGDA---LKKRVEPLAE--------------ELGAFVAGH 87 (293)
T ss_dssp TTTTCEEEEECCCSSSSHHHHHHHHHHHTTCE---EEEEECSHH---HHHHHHHHHH--------------HHTCEEEEE
T ss_pred cCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCE---EEEEcCCHH---HHHHHHHHHH--------------hcCCceEEE
Confidence 467899999999999 999999999999876 888888632 2233333321 124588999
Q ss_pred CCCCCCCCCCCHHHHHHHhc-------cccEEEEcccccCh-----------hHHHHHHHHHhHHHHHHHHHHHHHc-CC
Q psy6053 177 GDAEADELAIKESDRQLLAS-------EVDIMIHGAATIRF-----------DEALKKAVLLNTRGTKMMLSLAKEM-KH 237 (614)
Q Consensus 177 gDl~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~-----------~~~~~~~~~~Nv~gt~~ll~la~~~-~~ 237 (614)
+|+++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++.+... .+
T Consensus 88 ~Dv~d~~------~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~ 161 (293)
T 3grk_A 88 CDVADAA------SIDAVFETLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMAD 161 (293)
T ss_dssp CCTTCHH------HHHHHHHHHHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTT
T ss_pred CCCCCHH------HHHHHHHHHHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 9999976 6666664 68999999997641 3567788999999999999998763 23
Q ss_pred CceEEEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----
Q psy6053 238 LELFVHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN---- 313 (614)
Q Consensus 238 ~k~~V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~---- 313 (614)
-.++|++||..+..... ....|+.||+..+.+.+..+.
T Consensus 162 ~g~Iv~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~l~~~la~e~~~ 203 (293)
T 3grk_A 162 GGSILTLTYYGAEKVMP--------------------------------------NYNVMGVAKAALEASVKYLAVDLGP 203 (293)
T ss_dssp CEEEEEEECGGGTSBCT--------------------------------------TTTHHHHHHHHHHHHHHHHHHHHGG
T ss_pred CCEEEEEeehhhccCCC--------------------------------------chHHHHHHHHHHHHHHHHHHHHHhH
Confidence 45899999986543210 015799999999988877654
Q ss_pred CCCCEEEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCC
Q psy6053 314 NGMPCLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHR 393 (614)
Q Consensus 314 ~glp~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~ 393 (614)
+|+++..++||.|..+..... .............. ....+...+|+|++++.++..... -..
T Consensus 204 ~gI~vn~v~PG~v~T~~~~~~-------~~~~~~~~~~~~~~---------p~~r~~~pedvA~~v~~L~s~~~~--~it 265 (293)
T 3grk_A 204 QNIRVNAISAGPIKTLAASGI-------GDFRYILKWNEYNA---------PLRRTVTIDEVGDVGLYFLSDLSR--SVT 265 (293)
T ss_dssp GTEEEEEEEECCCCC-------------CCHHHHHHHHHHHS---------TTSSCCCHHHHHHHHHHHHSGGGT--TCC
T ss_pred hCCEEEEEecCCCcchhhhcc-------cchHHHHHHHHhcC---------CCCCCCCHHHHHHHHHHHcCcccc--CCc
Confidence 589999999999976543211 11112222221111 112356789999999988865432 236
Q ss_pred ccEEEeccC
Q psy6053 394 QSIVHLTSS 402 (614)
Q Consensus 394 ~~vyni~~~ 402 (614)
++++++.++
T Consensus 266 G~~i~vdGG 274 (293)
T 3grk_A 266 GEVHHADSG 274 (293)
T ss_dssp SCEEEESTT
T ss_pred ceEEEECCC
Confidence 889999887
No 229
>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}
Probab=99.71 E-value=9.2e-17 Score=159.99 Aligned_cols=218 Identities=12% Similarity=0.064 Sum_probs=150.3
Q ss_pred CCcEEEEecccccccHHHHHHHHh-hCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 101 TGKTLFMTGASGFLGKVLLEKILR-KSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 101 ~~~~VLITGaTGFlG~~Ll~~Ll~-~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
++|+||||||+|+||++++++|++ .|. +|++..|.... ...++.++.+|+
T Consensus 3 ~~k~vlITGas~gIG~~~a~~l~~~~g~---~v~~~~~~~~~--------------------------~~~~~~~~~~Dv 53 (244)
T 4e4y_A 3 AMANYLVTGGSKGIGKAVVELLLQNKNH---TVINIDIQQSF--------------------------SAENLKFIKADL 53 (244)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTSTTE---EEEEEESSCCC--------------------------CCTTEEEEECCT
T ss_pred CCCeEEEeCCCChHHHHHHHHHHhcCCc---EEEEecccccc--------------------------ccccceEEecCc
Confidence 578999999999999999999999 554 47788876542 224678999999
Q ss_pred CCCCCCCCHHHHHHHhc-----cccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHHc-CCCceEEEEeC
Q psy6053 180 EADELAIKESDRQLLAS-----EVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKEM-KHLELFVHIST 246 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~-----~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~-~~~k~~V~vST 246 (614)
++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++.+... ..-.++|++||
T Consensus 54 ~~~~------~v~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS 127 (244)
T 4e4y_A 54 TKQQ------DITNVLDIIKNVSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGS 127 (244)
T ss_dssp TCHH------HHHHHHHHTTTCCEEEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECC
T ss_pred CCHH------HHHHHHHHHHhCCCCEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECC
Confidence 9876 7777765 78999999997431 3567788999999999999988763 11147999999
Q ss_pred ceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCCEEEee
Q psy6053 247 AYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMPCLMLR 322 (614)
Q Consensus 247 ~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp~~IvR 322 (614)
..+..... ....|+.||+..|.+.+..+. +|+++..++
T Consensus 128 ~~~~~~~~--------------------------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~ 169 (244)
T 4e4y_A 128 DQCFIAKP--------------------------------------NSFAYTLSKGAIAQMTKSLALDLAKYQIRVNTVC 169 (244)
T ss_dssp GGGTCCCT--------------------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEE
T ss_pred HHHccCCC--------------------------------------CCchhHHHHHHHHHHHHHHHHHHHHcCeEEEEEe
Confidence 86543210 014799999999998877654 589999999
Q ss_pred cceeecccCCCCcc-ccCC-CCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEec
Q psy6053 323 PSIIIPVWREPLPG-WTDN-INGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLT 400 (614)
Q Consensus 323 p~~I~g~~~~p~~g-w~d~-~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~ 400 (614)
||.|.++....... +... ...+........ .......+..++|+|++++.++..... -..++++++.
T Consensus 170 PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~p~~r~~~p~dvA~~v~~l~s~~~~--~itG~~i~vd 238 (244)
T 4e4y_A 170 PGTVDTDLYRNLIQKYANNVGISFDEAQKQEE---------KEFPLNRIAQPQEIAELVIFLLSDKSK--FMTGGLIPID 238 (244)
T ss_dssp ESCBCCHHHHHHHHHHHHHHTCCHHHHHHHHH---------TTSTTSSCBCHHHHHHHHHHHHSGGGT--TCCSCEEEES
T ss_pred cCccCchhhHHHHHhhhhhcCCCHHHHHHHHh---------hcCCCCCCcCHHHHHHHHHHHhcCccc--cccCCeEeEC
Confidence 99986652110000 0000 000000111111 112223467899999999998865432 1368899998
Q ss_pred cC
Q psy6053 401 SS 402 (614)
Q Consensus 401 ~~ 402 (614)
++
T Consensus 239 GG 240 (244)
T 4e4y_A 239 GG 240 (244)
T ss_dssp TT
T ss_pred CC
Confidence 77
No 230
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=99.70 E-value=4.8e-17 Score=164.82 Aligned_cols=222 Identities=14% Similarity=0.115 Sum_probs=153.3
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
++||++|||||+|+||++++++|++.|.+ |+++.|.. +++++..+ .++ . ...++.++.+|+
T Consensus 24 l~gk~~lVTGas~gIG~aia~~la~~G~~---V~~~~r~~------~~~~~~~~-----~l~----~-~~~~~~~~~~Dv 84 (271)
T 4ibo_A 24 LGGRTALVTGSSRGLGRAMAEGLAVAGAR---ILINGTDP------SRVAQTVQ-----EFR----N-VGHDAEAVAFDV 84 (271)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCE---EEECCSCH------HHHHHHHH-----HHH----H-TTCCEEECCCCT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEeCCH------HHHHHHHH-----HHH----h-cCCceEEEEcCC
Confidence 67899999999999999999999999875 88887753 22222211 111 1 335789999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcccccC-------hhHHHHHHHHHhHHHHHHHHHHHHHc---CCCceEE
Q psy6053 180 EADELAIKESDRQLLAS-------EVDIMIHGAATIR-------FDEALKKAVLLNTRGTKMMLSLAKEM---KHLELFV 242 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~-------~~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~V 242 (614)
++++ +++.+++ ++|++||+||... -.+.++..+++|+.|+.++++.+... .+..++|
T Consensus 85 ~d~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV 158 (271)
T 4ibo_A 85 TSES------EIIEAFARLDEQGIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIV 158 (271)
T ss_dssp TCHH------HHHHHHHHHHHHTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred CCHH------HHHHHHHHHHHHCCCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEE
Confidence 9866 6766665 6899999999643 13567788999999999998877542 2446899
Q ss_pred EEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCCE
Q psy6053 243 HISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMPC 318 (614)
Q Consensus 243 ~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp~ 318 (614)
++||..+..... ....|+.||+..+.+.+..+. +|+++
T Consensus 159 ~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~v 200 (271)
T 4ibo_A 159 NIGSLTSELARA--------------------------------------TVAPYTVAKGGIKMLTRAMAAEWAQYGIQA 200 (271)
T ss_dssp EECCGGGTSBCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred EEccHHhCCCCC--------------------------------------CchhHHHHHHHHHHHHHHHHHHHhhhCeEE
Confidence 999986532210 015799999999988877654 58999
Q ss_pred EEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEE
Q psy6053 319 LMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVH 398 (614)
Q Consensus 319 ~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyn 398 (614)
..++||.|.++..... .+ . .........+. ....+..++|+|++++.++..... -..+++++
T Consensus 201 n~v~PG~v~T~~~~~~---~~---~-~~~~~~~~~~~---------p~~r~~~pedva~~v~~L~s~~~~--~itG~~i~ 262 (271)
T 4ibo_A 201 NAIGPGYMLTDMNQAL---ID---N-PEFDAWVKART---------PAKRWGKPQELVGTAVFLSASASD--YVNGQIIY 262 (271)
T ss_dssp EEEEECSBCSGGGHHH---HH---C-HHHHHHHHHHS---------TTCSCBCGGGGHHHHHHHHSGGGT--TCCSCEEE
T ss_pred EEEEeccEeCcchhhc---cc---C-HHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHhCcccc--CCCCcEEE
Confidence 9999999876532110 00 0 01111111111 112356789999999988765432 23688999
Q ss_pred eccC
Q psy6053 399 LTSS 402 (614)
Q Consensus 399 i~~~ 402 (614)
+.+|
T Consensus 263 vdGG 266 (271)
T 4ibo_A 263 VDGG 266 (271)
T ss_dssp ESTT
T ss_pred ECCC
Confidence 9887
No 231
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=99.70 E-value=2.6e-16 Score=163.08 Aligned_cols=238 Identities=11% Similarity=0.084 Sum_probs=157.3
Q ss_pred ccCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCc------CHHHHHHHHHhChhhHHhhhhccccccCeE
Q psy6053 99 TFTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGK------NARQRIEELFASPLFNLLKSVHGQKIIDKV 172 (614)
Q Consensus 99 ~~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~------~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v 172 (614)
.+++|+||||||+|+||++++++|++.|.+ |+++.|..... ...+++++..+ .+. . ...++
T Consensus 43 ~l~gk~~lVTGas~GIG~aia~~la~~G~~---Vv~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~----~-~~~~~ 109 (317)
T 3oec_A 43 RLQGKVAFITGAARGQGRTHAVRLAQDGAD---IVAIDLCRQQPNLDYAQGSPEELKETVR-----LVE----E-QGRRI 109 (317)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHTTCE---EEEEECCCCCTTCCSCCCCHHHHHHHHH-----HHH----H-TTCCE
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCe---EEEEecccccccccccccCHHHHHHHHH-----HHH----h-cCCeE
Confidence 367899999999999999999999999876 78887763221 11334443321 111 1 33578
Q ss_pred EEEeCCCCCCCCCCCHHHHHHHhc-------cccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHHc---
Q psy6053 173 LPISGDAEADELAIKESDRQLLAS-------EVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKEM--- 235 (614)
Q Consensus 173 ~~v~gDl~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~--- 235 (614)
.++.+|+++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++.+...
T Consensus 110 ~~~~~Dv~d~~------~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~ 183 (317)
T 3oec_A 110 IARQADVRDLA------SLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIE 183 (317)
T ss_dssp EEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 99999999866 6666665 68999999997532 3567788999999999999887542
Q ss_pred -CCCceEEEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh-
Q psy6053 236 -KHLELFVHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN- 313 (614)
Q Consensus 236 -~~~k~~V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~- 313 (614)
+.-.++|++||..+..... ....|+.||+..+.+.+..+.
T Consensus 184 ~~~~g~Iv~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~l~~~la~e 225 (317)
T 3oec_A 184 RGQGGSVIFVSSTVGLRGAP--------------------------------------GQSHYAASKHGVQGLMLSLANE 225 (317)
T ss_dssp TCSCEEEEEECCGGGSSCCT--------------------------------------TBHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCEEEEECcHHhcCCCC--------------------------------------CCcchHHHHHHHHHHHHHHHHH
Confidence 2245799999986542210 014799999999988877655
Q ss_pred ---CCCCEEEeecceeecccCCCCc---cccCCCCch-HHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhh
Q psy6053 314 ---NGMPCLMLRPSIIIPVWREPLP---GWTDNINGP-TGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAY 386 (614)
Q Consensus 314 ---~glp~~IvRp~~I~g~~~~p~~---gw~d~~~g~-~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~ 386 (614)
.|+++..++||.|.++...... .+......+ ..-....... .......++.++|+|++++.++...
T Consensus 226 ~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~p~~~~~pedvA~av~fL~s~~ 298 (317)
T 3oec_A 226 VGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDAAELFSQ-------LTLLPIPWVEPEDVSNAVAWLASDE 298 (317)
T ss_dssp HGGGTEEEEEEEECSBSSHHHHCHHHHHHHCTTCSSCCHHHHHHHHTT-------TCSSSSSSBCHHHHHHHHHHHTSGG
T ss_pred HhhcCeEEEEEecCcccCccccchhhhhhhhhhccccchhHHHHHHhh-------hccCCCCCCCHHHHHHHHHHHcCCc
Confidence 5899999999999765321000 000000000 0000010000 0111146789999999999887554
Q ss_pred hhcCCCCccEEEeccC
Q psy6053 387 LSQKEHRQSIVHLTSS 402 (614)
Q Consensus 387 ~~~~~~~~~vyni~~~ 402 (614)
.. -..++++++.+|
T Consensus 299 a~--~itG~~i~vdGG 312 (317)
T 3oec_A 299 AR--YIHGAAIPVDGG 312 (317)
T ss_dssp GT--TCCSCEEEESTT
T ss_pred cc--CCCCCEEEECcc
Confidence 32 136889999877
No 232
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=99.70 E-value=6.4e-17 Score=163.62 Aligned_cols=223 Identities=12% Similarity=0.067 Sum_probs=150.0
Q ss_pred ccCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCC
Q psy6053 99 TFTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGD 178 (614)
Q Consensus 99 ~~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gD 178 (614)
..++|+|+||||+|+||++++++|++.|.+ |++..|... +++++... .+. . ...++.++.+|
T Consensus 22 ~~~~k~vlITGas~gIG~~~a~~l~~~G~~---v~~~~~~~~-----~~~~~~~~-----~~~----~-~~~~~~~~~~D 83 (269)
T 3gk3_A 22 MQAKRVAFVTGGMGGLGAAISRRLHDAGMA---VAVSHSERN-----DHVSTWLM-----HER----D-AGRDFKAYAVD 83 (269)
T ss_dssp --CCCEEEETTTTSHHHHHHHHHHHTTTCE---EEEEECSCH-----HHHHHHHH-----HHH----T-TTCCCEEEECC
T ss_pred hhcCCEEEEECCCchHHHHHHHHHHHCCCE---EEEEcCCch-----HHHHHHHH-----HHH----h-cCCceEEEEec
Confidence 367899999999999999999999999876 777775432 11221110 001 1 33578999999
Q ss_pred CCCCCCCCCHHHHHHHhc-------cccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHHc---CCCceE
Q psy6053 179 AEADELAIKESDRQLLAS-------EVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKEM---KHLELF 241 (614)
Q Consensus 179 l~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~ 241 (614)
+++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++.+... .+..++
T Consensus 84 l~~~~------~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~i 157 (269)
T 3gk3_A 84 VADFE------SCERCAEKVLADFGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRI 157 (269)
T ss_dssp TTCHH------HHHHHHHHHHHHHSCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEE
T ss_pred CCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEE
Confidence 99876 6666654 78999999996532 3567788999999999998887541 245789
Q ss_pred EEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCC
Q psy6053 242 VHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMP 317 (614)
Q Consensus 242 V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp 317 (614)
|++||..+..... ....|+.||+..+.+.+..+. .|++
T Consensus 158 v~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~ 199 (269)
T 3gk3_A 158 VNIGSVNGSRGAF--------------------------------------GQANYASAKAGIHGFTKTLALETAKRGIT 199 (269)
T ss_dssp EEECCHHHHHCCT--------------------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred EEeCChhhccCCC--------------------------------------CcchHHHHHHHHHHHHHHHHHHhhhcCCE
Confidence 9999986532210 015799999988877766544 5899
Q ss_pred EEEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEE
Q psy6053 318 CLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIV 397 (614)
Q Consensus 318 ~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vy 397 (614)
+..++||.|..+.....+. .. .... .........+..++|+|++++.++..... ...++++
T Consensus 200 v~~v~PG~v~T~~~~~~~~---------~~----~~~~----~~~~~~~~~~~~p~dvA~~v~~L~s~~~~--~itG~~i 260 (269)
T 3gk3_A 200 VNTVSPGYLATAMVEAVPQ---------DV----LEAK----ILPQIPVGRLGRPDEVAALIAFLCSDDAG--FVTGADL 260 (269)
T ss_dssp EEEEEECSBCCTTTTC--------------------CC----SGGGCTTSSCBCHHHHHHHHHHHTSTTCT--TCCSCEE
T ss_pred EEEEecCcccchhhhhhch---------hH----HHHH----hhhcCCcCCccCHHHHHHHHHHHhCCCcC--CeeCcEE
Confidence 9999999987654321110 00 0000 00111223456899999999988765431 1368899
Q ss_pred EeccC
Q psy6053 398 HLTSS 402 (614)
Q Consensus 398 ni~~~ 402 (614)
++.+|
T Consensus 261 ~vdgG 265 (269)
T 3gk3_A 261 AINGG 265 (269)
T ss_dssp EESTT
T ss_pred EECCC
Confidence 99887
No 233
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=99.70 E-value=2.8e-16 Score=158.00 Aligned_cols=222 Identities=13% Similarity=0.101 Sum_probs=147.3
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
+++|+++||||+|+||++++++|++.|.+ |+++.|..... ..+..+++ + . ...++.++.+|+
T Consensus 6 l~~k~vlVTGas~GIG~aia~~la~~G~~---V~~~~~~~~~~-~~~~~~~~---------~----~-~~~~~~~~~~Dv 67 (259)
T 3edm_A 6 FTNRTIVVAGAGRDIGRACAIRFAQEGAN---VVLTYNGAAEG-AATAVAEI---------E----K-LGRSALAIKADL 67 (259)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEECSSCHH-HHHHHHHH---------H----T-TTSCCEEEECCT
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCE---EEEEcCCCHHH-HHHHHHHH---------H----h-cCCceEEEEcCC
Confidence 57899999999999999999999999876 77664543211 11111111 1 1 335688999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcccccC--------hhHHHHHHHHHhHHHHHHHHHHHHHc-CCCceEEE
Q psy6053 180 EADELAIKESDRQLLAS-------EVDIMIHGAATIR--------FDEALKKAVLLNTRGTKMMLSLAKEM-KHLELFVH 243 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~--------~~~~~~~~~~~Nv~gt~~ll~la~~~-~~~k~~V~ 243 (614)
++++ +++.+++ ++|++||+||... -.+.++..+++|+.|+.++++++... .+-.++|+
T Consensus 68 ~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~ 141 (259)
T 3edm_A 68 TNAA------EVEAAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVT 141 (259)
T ss_dssp TCHH------HHHHHHHHHHHHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEE
T ss_pred CCHH------HHHHHHHHHHHHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEE
Confidence 9976 6666665 6899999998541 13556788999999999999999863 11238999
Q ss_pred EeCceec-cCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh---CCCCEE
Q psy6053 244 ISTAYCH-LQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN---NGMPCL 319 (614)
Q Consensus 244 vST~~~~-~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~---~glp~~ 319 (614)
+||..+. ... | ....|+.||+..+.+.+..+. .++.+.
T Consensus 142 isS~~~~~~~~----------~----------------------------~~~~Y~asKaa~~~l~~~la~e~~~~I~vn 183 (259)
T 3edm_A 142 FSSQAGRDGGG----------P----------------------------GALAYATSKGAVMTFTRGLAKEVGPKIRVN 183 (259)
T ss_dssp ECCHHHHHCCS----------T----------------------------TCHHHHHHHHHHHHHHHHHHHHHTTTCEEE
T ss_pred EcCHHhccCCC----------C----------------------------CcHHHHHHHHHHHHHHHHHHHHHCCCCEEE
Confidence 9998654 111 0 015799999999998887665 349999
Q ss_pred EeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEe
Q psy6053 320 MLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHL 399 (614)
Q Consensus 320 IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni 399 (614)
.+.||.|..+...... .+ ..... .........+..++|+|++++.++..... -..++++++
T Consensus 184 ~v~PG~v~T~~~~~~~-------~~-~~~~~---------~~~~~p~~r~~~pedva~~v~~L~s~~~~--~itG~~i~v 244 (259)
T 3edm_A 184 AVCPGMISTTFHDTFT-------KP-EVRER---------VAGATSLKREGSSEDVAGLVAFLASDDAA--YVTGACYDI 244 (259)
T ss_dssp EEEECCBCC---------------------------------------CCBCHHHHHHHHHHHHSGGGT--TCCSCEEEE
T ss_pred EEEECCCcCccccccc-------Ch-HHHHH---------HHhcCCCCCCcCHHHHHHHHHHHcCcccc--CccCCEEEE
Confidence 9999988665322110 00 00000 01111223456889999999988865432 236889999
Q ss_pred ccC
Q psy6053 400 TSS 402 (614)
Q Consensus 400 ~~~ 402 (614)
.++
T Consensus 245 dGg 247 (259)
T 3edm_A 245 NGG 247 (259)
T ss_dssp SBC
T ss_pred CCC
Confidence 877
No 234
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=99.70 E-value=9.5e-16 Score=152.79 Aligned_cols=214 Identities=14% Similarity=0.069 Sum_probs=148.9
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
+++|+++||||||+||++++++|++.|++ |+++.|+. +++++..+ .. ++.++.+|+
T Consensus 3 l~~k~vlVTGas~giG~~ia~~l~~~G~~---V~~~~r~~------~~~~~~~~--------------~~-~~~~~~~D~ 58 (245)
T 1uls_A 3 LKDKAVLITGAAHGIGRATLELFAKEGAR---LVACDIEE------GPLREAAE--------------AV-GAHPVVMDV 58 (245)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCE---EEEEESCH------HHHHHHHH--------------TT-TCEEEECCT
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEeCCH------HHHHHHHH--------------Hc-CCEEEEecC
Confidence 46799999999999999999999999876 88888863 23333211 11 267889999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHHc---CCCceEE
Q psy6053 180 EADELAIKESDRQLLAS-------EVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKEM---KHLELFV 242 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~V 242 (614)
++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++.+... .+..++|
T Consensus 59 ~~~~------~~~~~~~~~~~~~g~id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv 132 (245)
T 1uls_A 59 ADPA------SVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIV 132 (245)
T ss_dssp TCHH------HHHHHHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEE
Confidence 9865 6666654 48999999996432 3567788999999999999888652 2467999
Q ss_pred EEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCCE
Q psy6053 243 HISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMPC 318 (614)
Q Consensus 243 ~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp~ 318 (614)
++||....+. | ....|+.||+..+.+.+..+. .|+++
T Consensus 133 ~isS~~~~~~-----------~----------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v 173 (245)
T 1uls_A 133 LTASRVYLGN-----------L----------------------------GQANYAASMAGVVGLTRTLALELGRWGIRV 173 (245)
T ss_dssp EECCGGGGCC-----------T----------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred EEccchhcCC-----------C----------------------------CchhHHHHHHHHHHHHHHHHHHHhHhCeEE
Confidence 9999862111 0 014799999988887766543 58999
Q ss_pred EEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEE
Q psy6053 319 LMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVH 398 (614)
Q Consensus 319 ~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyn 398 (614)
++++||.|..+... .. .+ .......... + ...+...+|+|++++.++..... ...+++++
T Consensus 174 ~~v~PG~v~t~~~~-------~~-~~-~~~~~~~~~~-------p--~~~~~~~~dvA~~v~~l~s~~~~--~~tG~~~~ 233 (245)
T 1uls_A 174 NTLAPGFIETRMTA-------KV-PE-KVREKAIAAT-------P--LGRAGKPLEVAYAALFLLSDESS--FITGQVLF 233 (245)
T ss_dssp EEEEECSBCCTTTS-------SS-CH-HHHHHHHHTC-------T--TCSCBCHHHHHHHHHHHHSGGGT--TCCSCEEE
T ss_pred EEEEeCcCcCcchh-------hc-CH-HHHHHHHhhC-------C--CCCCcCHHHHHHHHHHHhCchhc--CCcCCEEE
Confidence 99999998655321 11 11 1111111110 0 01267899999999988865431 13678888
Q ss_pred eccC
Q psy6053 399 LTSS 402 (614)
Q Consensus 399 i~~~ 402 (614)
+.++
T Consensus 234 vdgG 237 (245)
T 1uls_A 234 VDGG 237 (245)
T ss_dssp ESTT
T ss_pred ECCC
Confidence 8776
No 235
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=99.70 E-value=1.1e-16 Score=159.87 Aligned_cols=219 Identities=15% Similarity=0.139 Sum_probs=150.5
Q ss_pred ccCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCC
Q psy6053 99 TFTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGD 178 (614)
Q Consensus 99 ~~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gD 178 (614)
.+++|+++||||+|+||++++++|++.|.+ |+++.|+. +++++..+. ...++.++.+|
T Consensus 3 ~l~gk~vlVTGas~gIG~a~a~~l~~~G~~---V~~~~r~~------~~~~~~~~~-------------~~~~~~~~~~D 60 (247)
T 3rwb_A 3 RLAGKTALVTGAAQGIGKAIAARLAADGAT---VIVSDINA------EGAKAAAAS-------------IGKKARAIAAD 60 (247)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEECSCH------HHHHHHHHH-------------HCTTEEECCCC
T ss_pred CcCCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEeCCH------HHHHHHHHH-------------hCCceEEEEcC
Confidence 367899999999999999999999999875 88888763 233322110 22468899999
Q ss_pred CCCCCCCCCHHHHHHHhc-------cccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHH----HcCCCce
Q psy6053 179 AEADELAIKESDRQLLAS-------EVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAK----EMKHLEL 240 (614)
Q Consensus 179 l~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~----~~~~~k~ 240 (614)
+++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++.+. +.+...+
T Consensus 61 v~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~ 134 (247)
T 3rwb_A 61 ISDPG------SVKALFAEIQALTGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGR 134 (247)
T ss_dssp TTCHH------HHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEE
T ss_pred CCCHH------HHHHHHHHHHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcE
Confidence 99876 6666665 68999999997532 35677889999999999988743 3223578
Q ss_pred EEEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCC
Q psy6053 241 FVHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGM 316 (614)
Q Consensus 241 ~V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~gl 316 (614)
+|++||..+..... ....|+.||+..+.+.+..+. +|+
T Consensus 135 iv~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi 176 (247)
T 3rwb_A 135 VISIASNTFFAGTP--------------------------------------NMAAYVAAKGGVIGFTRALATELGKYNI 176 (247)
T ss_dssp EEEECCTHHHHTCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTE
T ss_pred EEEECchhhccCCC--------------------------------------CchhhHHHHHHHHHHHHHHHHHhhhcCe
Confidence 99999986532210 015799999888877766554 589
Q ss_pred CEEEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccE
Q psy6053 317 PCLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSI 396 (614)
Q Consensus 317 p~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~v 396 (614)
++..++||.|..+.....+. . ....+. .... ....+...+|+|+++..++..... -..+++
T Consensus 177 ~vn~v~PG~v~t~~~~~~~~---~--~~~~~~-~~~~-----------~~~r~~~pedva~~v~~L~s~~~~--~itG~~ 237 (247)
T 3rwb_A 177 TANAVTPGLIESDGVKASPH---N--EAFGFV-EMLQ-----------AMKGKGQPEHIADVVSFLASDDAR--WITGQT 237 (247)
T ss_dssp EEEEEEECSBCCHHHHTSGG---G--GGHHHH-HHHS-----------SSCSCBCHHHHHHHHHHHHSGGGT--TCCSCE
T ss_pred EEEEEeeCcCcCccccccCh---h--HHHHHH-hccc-----------ccCCCcCHHHHHHHHHHHhCcccc--CCCCCE
Confidence 99999999986653211100 0 000111 0000 111245789999999988865432 136789
Q ss_pred EEeccC
Q psy6053 397 VHLTSS 402 (614)
Q Consensus 397 yni~~~ 402 (614)
+++.++
T Consensus 238 i~vdGG 243 (247)
T 3rwb_A 238 LNVDAG 243 (247)
T ss_dssp EEESTT
T ss_pred EEECCC
Confidence 988876
No 236
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=99.70 E-value=2.2e-16 Score=156.11 Aligned_cols=199 Identities=18% Similarity=0.168 Sum_probs=141.9
Q ss_pred CCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCC
Q psy6053 101 TGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAE 180 (614)
Q Consensus 101 ~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~ 180 (614)
++|+|+||||+|+||++++++|++.|++ |++..|+. +++++..+ .+... ...++.++.+|++
T Consensus 1 ~~k~vlITGas~gIG~~ia~~l~~~G~~---V~~~~r~~------~~~~~~~~-----~~~~~----~~~~~~~~~~D~~ 62 (235)
T 3l77_A 1 EMKVAVITGASRGIGEAIARALARDGYA---LALGARSV------DRLEKIAH-----ELMQE----QGVEVFYHHLDVS 62 (235)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTTCE---EEEEESCH------HHHHHHHH-----HHHHH----HCCCEEEEECCTT
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEeCCH------HHHHHHHH-----HHHhh----cCCeEEEEEeccC
Confidence 3689999999999999999999999876 88888864 22322211 11111 2357899999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHHc--CCCceEEEE
Q psy6053 181 ADELAIKESDRQLLAS-------EVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKEM--KHLELFVHI 244 (614)
Q Consensus 181 ~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~--~~~k~~V~v 244 (614)
+++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++.+... .+..++|++
T Consensus 63 ~~~------~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ii~~ 136 (235)
T 3l77_A 63 KAE------SVEEFSKKVLERFGDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVT 136 (235)
T ss_dssp CHH------HHHHHCC-HHHHHSSCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred CHH------HHHHHHHHHHHhcCCCCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEE
Confidence 976 7777765 68999999997532 3567788999999999999988642 123567888
Q ss_pred eCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh--CCCCEEEee
Q psy6053 245 STAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN--NGMPCLMLR 322 (614)
Q Consensus 245 ST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~--~glp~~IvR 322 (614)
||..+.... | ....|+.||+..+.+.+.... .|+++..++
T Consensus 137 sS~~~~~~~----------~----------------------------~~~~Y~~sKaa~~~~~~~l~~~~~~i~v~~v~ 178 (235)
T 3l77_A 137 TSDVSARLI----------P----------------------------YGGGYVSTKWAARALVRTFQIENPDVRFFELR 178 (235)
T ss_dssp CCGGGSSCC----------T----------------------------TCHHHHHHHHHHHHHHHHHHHHCTTSEEEEEE
T ss_pred ecchhcccC----------C----------------------------CcchHHHHHHHHHHHHHHHhhcCCCeEEEEEe
Confidence 877543211 1 125799999999999988643 599999999
Q ss_pred cceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhh
Q psy6053 323 PSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYL 387 (614)
Q Consensus 323 p~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~ 387 (614)
||.|-.+.....+ .......++..+|+|++++.++..+.
T Consensus 179 PG~v~T~~~~~~~--------------------------~~~~~~~~~~p~dva~~v~~l~~~~~ 217 (235)
T 3l77_A 179 PGAVDTYFGGSKP--------------------------GKPKEKGYLKPDEIAEAVRCLLKLPK 217 (235)
T ss_dssp ECSBSSSTTTCCS--------------------------CCCGGGTCBCHHHHHHHHHHHHTSCT
T ss_pred CCccccccccccC--------------------------CcccccCCCCHHHHHHHHHHHHcCCC
Confidence 9988554321110 01112256789999999999987654
No 237
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=99.70 E-value=2.9e-16 Score=160.14 Aligned_cols=228 Identities=14% Similarity=0.074 Sum_probs=152.2
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
.++|+|+||||+|+||++++++|++.|.+ |+++.|+. +++++..+ +... ...++.++.+|+
T Consensus 26 ~~~k~~lVTGas~GIG~aia~~la~~G~~---V~~~~r~~------~~~~~~~~---------~l~~-~~~~~~~~~~Dv 86 (283)
T 3v8b_A 26 QPSPVALITGAGSGIGRATALALAADGVT---VGALGRTR------TEVEEVAD---------EIVG-AGGQAIALEADV 86 (283)
T ss_dssp -CCCEEEEESCSSHHHHHHHHHHHHTTCE---EEEEESSH------HHHHHHHH---------HHTT-TTCCEEEEECCT
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEeCCH------HHHHHHHH---------HHHh-cCCcEEEEEccC
Confidence 45789999999999999999999999875 88888864 22222211 1111 335789999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcccccCh--------hHHHHHHHHHhHHHHHHHHHHH----HHcCCCce
Q psy6053 180 EADELAIKESDRQLLAS-------EVDIMIHGAATIRF--------DEALKKAVLLNTRGTKMMLSLA----KEMKHLEL 240 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~--------~~~~~~~~~~Nv~gt~~ll~la----~~~~~~k~ 240 (614)
++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++++ ++ .+..+
T Consensus 87 ~d~~------~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~-~~~g~ 159 (283)
T 3v8b_A 87 SDEL------QMRNAVRDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQ-RGGGA 159 (283)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-HTCEE
T ss_pred CCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH-cCCce
Confidence 9875 6666654 68999999996421 3567788999999999999988 44 35579
Q ss_pred EEEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCC
Q psy6053 241 FVHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGM 316 (614)
Q Consensus 241 ~V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~gl 316 (614)
+|++||..+.... +.| ....|+.||+..+.+.+..+. +|+
T Consensus 160 Iv~isS~~~~~~~--------~~~----------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gI 203 (283)
T 3v8b_A 160 IVVVSSINGTRTF--------TTP----------------------------GATAYTATKAAQVAIVQQLALELGKHHI 203 (283)
T ss_dssp EEEECCSBTTTBC--------CST----------------------------TCHHHHHHHHHHHHHHHHHHHHTTTTTE
T ss_pred EEEEcChhhccCC--------CCC----------------------------CchHHHHHHHHHHHHHHHHHHHhCccCc
Confidence 9999998653210 000 015799999999998887664 589
Q ss_pred CEEEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCcc--ccceeHHHHHHHHHHHHHhhhhcCCCCc
Q psy6053 317 PCLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGY--ADFLPVDITINGIFVAIWAYLSQKEHRQ 394 (614)
Q Consensus 317 p~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~--~d~vpVDdva~aii~~~~~~~~~~~~~~ 394 (614)
++..++||.|..+...... ..+.. ............... ..+...+|+|++++.++..... -..+
T Consensus 204 ~vn~v~PG~v~T~~~~~~~------~~~~~-----~~~~~~~~~~~~~p~~~~r~~~pedvA~~v~fL~s~~a~--~itG 270 (283)
T 3v8b_A 204 RVNAVCPGAIETNISDNTK------LRHEE-----ETAIPVEWPKGQVPITDGQPGRSEDVAELIRFLVSERAR--HVTG 270 (283)
T ss_dssp EEEEEEECSBSSCTTCCTT------BCCHH-----HHSCCCBCTTCSCGGGTTCCBCHHHHHHHHHHHTSGGGT--TCCS
T ss_pred EEEEEEeCCCcCCcccccc------cccch-----hhhhhhhhhhhcCccccCCCCCHHHHHHHHHHHcCcccc--CCcC
Confidence 9999999999665432110 00000 000000000000001 2356779999999988765432 1368
Q ss_pred cEEEeccC
Q psy6053 395 SIVHLTSS 402 (614)
Q Consensus 395 ~vyni~~~ 402 (614)
+++++.+|
T Consensus 271 ~~i~vdGG 278 (283)
T 3v8b_A 271 SPVWIDGG 278 (283)
T ss_dssp CEEEESTT
T ss_pred CEEEECcC
Confidence 88988776
No 238
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=99.70 E-value=1.7e-16 Score=161.47 Aligned_cols=227 Identities=15% Similarity=0.136 Sum_probs=152.8
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
+++|+|+||||+|+||++++++|++.|++ |+++.|+. +++++..+ .+..... ...++.++.+|+
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~---V~~~~r~~------~~~~~~~~-----~~~~~~~--~~~~~~~~~~Dv 67 (280)
T 1xkq_A 4 FSNKTVIITGSSNGIGRTTAILFAQEGAN---VTITGRSS------ERLEETRQ-----IILKSGV--SEKQVNSVVADV 67 (280)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTCE---EEEEESCH------HHHHHHHH-----HHHTTTC--CGGGEEEEECCT
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCE---EEEEeCCH------HHHHHHHH-----HHHHcCC--CCcceEEEEecC
Confidence 56899999999999999999999999875 88888864 22222211 1111000 112689999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcccccC-------h----hHHHHHHHHHhHHHHHHHHHHHHHc---CCC
Q psy6053 180 EADELAIKESDRQLLAS-------EVDIMIHGAATIR-------F----DEALKKAVLLNTRGTKMMLSLAKEM---KHL 238 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~-------~----~~~~~~~~~~Nv~gt~~ll~la~~~---~~~ 238 (614)
++++ +++.+++ ++|++||+||... + .+.++..+++|+.|+.++++.+... .+
T Consensus 68 ~~~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~- 140 (280)
T 1xkq_A 68 TTED------GQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK- 140 (280)
T ss_dssp TSHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-
T ss_pred CCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-
Confidence 9865 6666654 6899999999643 1 2457788999999999999988752 13
Q ss_pred ceEEEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----C
Q psy6053 239 ELFVHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----N 314 (614)
Q Consensus 239 k~~V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~ 314 (614)
.++|++||..+..... | ....|+.||+..|.+.+..+. .
T Consensus 141 g~iv~isS~~~~~~~~---------~----------------------------~~~~Y~asK~a~~~~~~~la~e~~~~ 183 (280)
T 1xkq_A 141 GEIVNVSSIVAGPQAQ---------P----------------------------DFLYYAIAKAALDQYTRSTAIDLAKF 183 (280)
T ss_dssp CEEEEECCGGGSSSCC---------C----------------------------SSHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CcEEEecCccccCCCC---------C----------------------------cccHHHHHHHHHHHHHHHHHHHhccC
Confidence 7999999986543210 0 014799999999998877653 5
Q ss_pred CCCEEEeecceeecccCCCCccccCCCCch-----HHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhh-hh
Q psy6053 315 GMPCLMLRPSIIIPVWREPLPGWTDNINGP-----TGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAY-LS 388 (614)
Q Consensus 315 glp~~IvRp~~I~g~~~~p~~gw~d~~~g~-----~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~-~~ 388 (614)
|+++++++||.|.++...... .... .......... .....+...+|+|++++.++... ..
T Consensus 184 gi~v~~v~PG~v~t~~~~~~~-----~~~~~~~~~~~~~~~~~~~---------~p~~~~~~pedvA~~v~~l~s~~~~~ 249 (280)
T 1xkq_A 184 GIRVNSVSPGMVETGFTNAMG-----MPDQASQKFYNFMASHKEC---------IPIGAAGKPEHIANIILFLADRNLSF 249 (280)
T ss_dssp TCEEEEEEECCBCSSHHHHTT-----CCHHHHHHHHHHHHHCTTT---------CTTSSCBCHHHHHHHHHHHHCHHHHT
T ss_pred CeEEEEEeeCcCcCCcccccc-----cccccccchHHHHHHHHcC---------CCCCCCCCHHHHHHHHHHhcCccccc
Confidence 899999999999775321100 0000 0111111111 11124788999999999888654 21
Q ss_pred cCCCCccEEEeccC
Q psy6053 389 QKEHRQSIVHLTSS 402 (614)
Q Consensus 389 ~~~~~~~vyni~~~ 402 (614)
-..++++++.++
T Consensus 250 --~~tG~~i~vdgG 261 (280)
T 1xkq_A 250 --YILGQSIVADGG 261 (280)
T ss_dssp --TCCSCEEEESTT
T ss_pred --CccCCeEEECCC
Confidence 136789999877
No 239
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=99.70 E-value=1.2e-15 Score=156.80 Aligned_cols=241 Identities=13% Similarity=0.102 Sum_probs=158.9
Q ss_pred ccccccCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCc------CHHHHHHHHHhChhhHHhhhhccccc
Q psy6053 95 RIGETFTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGK------NARQRIEELFASPLFNLLKSVHGQKI 168 (614)
Q Consensus 95 ~i~~~~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~------~~~~Rl~~~~~~~~f~~l~~~~p~~~ 168 (614)
.+...+++|+++||||+|+||++++++|++.|.+ |+++.|.+... ...+++++..+ .+. . .
T Consensus 21 ~m~~~l~gk~~lVTGas~GIG~aia~~la~~G~~---V~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~----~-~ 87 (299)
T 3t7c_A 21 SMAGKVEGKVAFITGAARGQGRSHAITLAREGAD---IIAIDVCKQLDGVKLPMSTPDDLAETVR-----QVE----A-L 87 (299)
T ss_dssp -CCCTTTTCEEEEESTTSHHHHHHHHHHHHTTCE---EEEEECCSCCTTCCSCCCCHHHHHHHHH-----HHH----H-T
T ss_pred ccccccCCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEecccccccccccccCHHHHHHHHH-----HHH----h-c
Confidence 3445578999999999999999999999999876 88888874211 01233333221 111 1 3
Q ss_pred cCeEEEEeCCCCCCCCCCCHHHHHHHhc-------cccEEEEcccccCh--------hHHHHHHHHHhHHHHHHHHHHHH
Q psy6053 169 IDKVLPISGDAEADELAIKESDRQLLAS-------EVDIMIHGAATIRF--------DEALKKAVLLNTRGTKMMLSLAK 233 (614)
Q Consensus 169 ~~~v~~v~gDl~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~--------~~~~~~~~~~Nv~gt~~ll~la~ 233 (614)
..++.++.+|+++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++++.
T Consensus 88 ~~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~ 161 (299)
T 3t7c_A 88 GRRIIASQVDVRDFD------AMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAI 161 (299)
T ss_dssp TCCEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred CCceEEEECCCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence 357899999999876 6666654 68999999996431 35677899999999999999875
Q ss_pred Hc----CCCceEEEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHH
Q psy6053 234 EM----KHLELFVHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVV 309 (614)
Q Consensus 234 ~~----~~~k~~V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~ 309 (614)
.. ++..++|++||..+..... ....|+.||+..+.+.+
T Consensus 162 ~~~~~~~~~g~Iv~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~l~~ 203 (299)
T 3t7c_A 162 PHIMAGKRGGSIVFTSSIGGLRGAE--------------------------------------NIGNYIASKHGLHGLMR 203 (299)
T ss_dssp HHHHHTTSCEEEEEECCGGGTSCCT--------------------------------------TCHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCCcEEEEECChhhccCCC--------------------------------------CcchHHHHHHHHHHHHH
Confidence 42 2356899999986542210 01579999999988887
Q ss_pred HHhh----CCCCEEEeecceeecccCCCCcc---ccCCCC--chHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHH
Q psy6053 310 EAMN----NGMPCLMLRPSIIIPVWREPLPG---WTDNIN--GPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIF 380 (614)
Q Consensus 310 ~~~~----~glp~~IvRp~~I~g~~~~p~~g---w~d~~~--g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii 380 (614)
..+. .|+.+..++||.|..+.....+. +..... ........... ... ....+...+|+|++++
T Consensus 204 ~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~-~p~r~~~pedvA~~v~ 275 (299)
T 3t7c_A 204 TMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASRQ-------MHV-LPIPYVEPADISNAIL 275 (299)
T ss_dssp HHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHH-------HSS-SSCSCBCHHHHHHHHH
T ss_pred HHHHHhcccCcEEEEEecCCccCccccccchhhhhhhhhccchhhHHHHHhhh-------hcc-cCcCCCCHHHHHHHHH
Confidence 7654 58999999999997764321100 000000 00000000000 000 0134678999999999
Q ss_pred HHHHhhhhcCCCCccEEEeccC
Q psy6053 381 VAIWAYLSQKEHRQSIVHLTSS 402 (614)
Q Consensus 381 ~~~~~~~~~~~~~~~vyni~~~ 402 (614)
.++..... -..+.++++.+|
T Consensus 276 fL~s~~a~--~itG~~i~vdGG 295 (299)
T 3t7c_A 276 FLVSDDAR--YITGVSLPVDGG 295 (299)
T ss_dssp HHHSGGGT--TCCSCEEEESTT
T ss_pred HHhCcccc--cCcCCEEeeCCC
Confidence 98865432 136889999877
No 240
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=99.70 E-value=1.9e-16 Score=159.46 Aligned_cols=199 Identities=12% Similarity=0.113 Sum_probs=138.4
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
+++|+||||||+|+||++++++|++.|.+ |+++.|+. +++++..+ .+. . ...++.++.+|+
T Consensus 27 l~~k~vlITGas~gIG~~la~~l~~~G~~---V~~~~r~~------~~~~~~~~-----~~~----~-~~~~~~~~~~D~ 87 (262)
T 3rkr_A 27 LSGQVAVVTGASRGIGAAIARKLGSLGAR---VVLTARDV------EKLRAVER-----EIV----A-AGGEAESHACDL 87 (262)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCE---EEEEESCH------HHHHHHHH-----HHH----H-TTCEEEEEECCT
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCE---EEEEECCH------HHHHHHHH-----HHH----H-hCCceeEEEecC
Confidence 57899999999999999999999999875 88888864 22222211 111 1 335789999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcccccC--------hhHHHHHHHHHhHHHHHHHHHHHHHc---CCCceE
Q psy6053 180 EADELAIKESDRQLLAS-------EVDIMIHGAATIR--------FDEALKKAVLLNTRGTKMMLSLAKEM---KHLELF 241 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~--------~~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~ 241 (614)
++++ +++.+++ .+|+|||+||... -.+.++..+++|+.|+.++++.+... .+..++
T Consensus 88 ~~~~------~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~i 161 (262)
T 3rkr_A 88 SHSD------AIAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHI 161 (262)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEE
T ss_pred CCHH------HHHHHHHHHHHhcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceE
Confidence 9876 6666654 4899999999721 13557788999999999998886541 356799
Q ss_pred EEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCC
Q psy6053 242 VHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMP 317 (614)
Q Consensus 242 V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp 317 (614)
|++||..+..... ....|+.||+..|.+++..+. .|++
T Consensus 162 v~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gi~ 203 (262)
T 3rkr_A 162 INISSLAGKNPVA--------------------------------------DGAAYTASKWGLNGLMTSAAEELRQHQVR 203 (262)
T ss_dssp EEECSSCSSCCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCE
T ss_pred EEEechhhcCCCC--------------------------------------CCchHHHHHHHHHHHHHHHHHHhhhcCcE
Confidence 9999987642210 015799999999988876654 5899
Q ss_pred EEEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhh
Q psy6053 318 CLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYL 387 (614)
Q Consensus 318 ~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~ 387 (614)
+.+++||.|..+..... . .......++..+|+|++++.++....
T Consensus 204 v~~v~PG~v~t~~~~~~-----------------~---------~~~~~~~~~~p~dvA~~v~~l~s~~~ 247 (262)
T 3rkr_A 204 VSLVAPGSVRTEFGVGL-----------------S---------AKKSALGAIEPDDIADVVALLATQAD 247 (262)
T ss_dssp EEEEEECCC------------------------------------------CCCHHHHHHHHHHHHTCCT
T ss_pred EEEEecCCCcCCccccc-----------------c---------cccccccCCCHHHHHHHHHHHhcCcc
Confidence 99999998855421100 0 01112345789999999998886543
No 241
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=99.69 E-value=5.9e-16 Score=158.84 Aligned_cols=222 Identities=10% Similarity=0.036 Sum_probs=156.4
Q ss_pred ccCCcEEEEecccc--cccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEe
Q psy6053 99 TFTGKTLFMTGASG--FLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPIS 176 (614)
Q Consensus 99 ~~~~~~VLITGaTG--FlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~ 176 (614)
.+++|+|+||||+| +||++++++|++.|.+ |+++.|+... .++++++.+ ...++.++.
T Consensus 27 ~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~---V~~~~r~~~~---~~~~~~~~~--------------~~~~~~~~~ 86 (296)
T 3k31_A 27 LMEGKKGVIIGVANDKSLAWGIAKAVCAQGAE---VALTYLSETF---KKRVDPLAE--------------SLGVKLTVP 86 (296)
T ss_dssp TTTTCEEEEECCCSTTSHHHHHHHHHHHTTCE---EEEEESSGGG---HHHHHHHHH--------------HHTCCEEEE
T ss_pred ccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCE---EEEEeCChHH---HHHHHHHHH--------------hcCCeEEEE
Confidence 36789999999998 9999999999999876 8888887432 333433321 113467899
Q ss_pred CCCCCCCCCCCHHHHHHHhc-------cccEEEEcccccCh-----------hHHHHHHHHHhHHHHHHHHHHHHHc-CC
Q psy6053 177 GDAEADELAIKESDRQLLAS-------EVDIMIHGAATIRF-----------DEALKKAVLLNTRGTKMMLSLAKEM-KH 237 (614)
Q Consensus 177 gDl~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~-----------~~~~~~~~~~Nv~gt~~ll~la~~~-~~ 237 (614)
+|+++++ +++.+++ ++|++||+||.... .+.+...+++|+.|+.++++.+... ..
T Consensus 87 ~Dv~d~~------~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~ 160 (296)
T 3k31_A 87 CDVSDAE------SVDNMFKVLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTN 160 (296)
T ss_dssp CCTTCHH------HHHHHHHHHHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT
T ss_pred cCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 9999976 6766664 57999999997532 3457788999999999999998763 22
Q ss_pred CceEEEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----
Q psy6053 238 LELFVHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN---- 313 (614)
Q Consensus 238 ~k~~V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~---- 313 (614)
-.++|++||..+..... ....|+.||+..+.+.+..+.
T Consensus 161 ~g~IV~isS~~~~~~~~--------------------------------------~~~~Y~asKaal~~l~~~la~e~~~ 202 (296)
T 3k31_A 161 GGSILTLSYYGAEKVVP--------------------------------------HYNVMGVCKAALEASVKYLAVDLGK 202 (296)
T ss_dssp CEEEEEEECGGGTSCCT--------------------------------------TTTHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCEEEEEEehhhccCCC--------------------------------------CchhhHHHHHHHHHHHHHHHHHHhh
Confidence 35899999986542210 015799999999988877654
Q ss_pred CCCCEEEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCC
Q psy6053 314 NGMPCLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHR 393 (614)
Q Consensus 314 ~glp~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~ 393 (614)
+|+++..++||.|..+..... .............. ....+...+|+|++++.++..... -..
T Consensus 203 ~gIrvn~v~PG~v~T~~~~~~-------~~~~~~~~~~~~~~---------p~~r~~~pedvA~~v~fL~s~~a~--~it 264 (296)
T 3k31_A 203 QQIRVNAISAGPVRTLASSGI-------SDFHYILTWNKYNS---------PLRRNTTLDDVGGAALYLLSDLGR--GTT 264 (296)
T ss_dssp TTEEEEEEEECCCCCSSCCSC-------HHHHHHHHHHHHHS---------TTSSCCCHHHHHHHHHHHHSGGGT--TCC
T ss_pred cCcEEEEEEECCCcCchhhcc-------cchHHHHHHHHhcC---------CCCCCCCHHHHHHHHHHHcCCccC--Ccc
Confidence 589999999999977643211 11111222211111 112356789999999998865432 236
Q ss_pred ccEEEeccC
Q psy6053 394 QSIVHLTSS 402 (614)
Q Consensus 394 ~~vyni~~~ 402 (614)
++++++.++
T Consensus 265 G~~i~vdGG 273 (296)
T 3k31_A 265 GETVHVDCG 273 (296)
T ss_dssp SCEEEESTT
T ss_pred CCEEEECCC
Confidence 889999887
No 242
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=99.69 E-value=3.4e-16 Score=158.14 Aligned_cols=235 Identities=14% Similarity=0.109 Sum_probs=153.9
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
+++|+++||||+|+||++++++|++.|.+ |+++.|+.. ++++..+ .+....+ ..++..+.+|+
T Consensus 8 l~~k~~lVTGas~gIG~aia~~l~~~G~~---V~~~~r~~~------~~~~~~~-----~l~~~~~---~~~~~~~~~D~ 70 (267)
T 3t4x_A 8 LKGKTALVTGSTAGIGKAIATSLVAEGAN---VLINGRREE------NVNETIK-----EIRAQYP---DAILQPVVADL 70 (267)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCE---EEEEESSHH------HHHHHHH-----HHHHHCT---TCEEEEEECCT
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEeCCHH------HHHHHHH-----HHHhhCC---CceEEEEecCC
Confidence 57899999999999999999999999876 888888642 2222111 1222222 25788999999
Q ss_pred CCCCCCCCHHHHHHHhc---cccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHHc---CCCceEEEEeC
Q psy6053 180 EADELAIKESDRQLLAS---EVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKEM---KHLELFVHIST 246 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~---~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~V~vST 246 (614)
++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++.+.+... .+..++|++||
T Consensus 71 ~~~~------~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS 144 (267)
T 3t4x_A 71 GTEQ------GCQDVIEKYPKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIAS 144 (267)
T ss_dssp TSHH------HHHHHHHHCCCCSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECC
T ss_pred CCHH------HHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcc
Confidence 9865 6666665 78999999997532 3567778999999977776655431 35679999999
Q ss_pred ceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCCEEEee
Q psy6053 247 AYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMPCLMLR 322 (614)
Q Consensus 247 ~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp~~IvR 322 (614)
..+..... ....|+.||+..+.+.+..+. +|+++..++
T Consensus 145 ~~~~~~~~--------------------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~ 186 (267)
T 3t4x_A 145 EAAIMPSQ--------------------------------------EMAHYSATKTMQLSLSRSLAELTTGTNVTVNTIM 186 (267)
T ss_dssp GGGTSCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEE
T ss_pred hhhccCCC--------------------------------------cchHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEe
Confidence 87642210 015799999999999887765 579999999
Q ss_pred cceeecccCCCCc-cccCC-CCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEec
Q psy6053 323 PSIIIPVWREPLP-GWTDN-INGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLT 400 (614)
Q Consensus 323 p~~I~g~~~~p~~-gw~d~-~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~ 400 (614)
||.|..+...... ....+ ...+............ .......+..++|+|++++.++..... -..++++++.
T Consensus 187 PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~r~~~pedvA~~v~fL~s~~~~--~itG~~i~vd 259 (267)
T 3t4x_A 187 PGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENR-----PTSIIQRLIRPEEIAHLVTFLSSPLSS--AINGSALRID 259 (267)
T ss_dssp ECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHHC-----TTCSSCSCBCTHHHHHHHHHHHSGGGT--TCCSCEEEES
T ss_pred CCeecCccHHHHHhhcCcccCCCHHHHHHHHhhccC-----CcccccCccCHHHHHHHHHHHcCcccc--CccCCeEEEC
Confidence 9988654211000 00000 0001111111111000 011123578899999999988865432 2368899998
Q ss_pred cC
Q psy6053 401 SS 402 (614)
Q Consensus 401 ~~ 402 (614)
+|
T Consensus 260 GG 261 (267)
T 3t4x_A 260 GG 261 (267)
T ss_dssp TT
T ss_pred CC
Confidence 87
No 243
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=99.69 E-value=2.9e-16 Score=158.71 Aligned_cols=222 Identities=14% Similarity=0.092 Sum_probs=147.6
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
.++|+++||||+|+||++++++|++.|.+ |++..+.... ..+.+.+.+. . ...++.++.+|+
T Consensus 25 ~~~k~~lVTGas~GIG~aia~~la~~G~~---Vv~~~~~~~~--~~~~~~~~~~------------~-~~~~~~~~~~Dl 86 (267)
T 3u5t_A 25 ETNKVAIVTGASRGIGAAIAARLASDGFT---VVINYAGKAA--AAEEVAGKIE------------A-AGGKALTAQADV 86 (267)
T ss_dssp --CCEEEEESCSSHHHHHHHHHHHHHTCE---EEEEESSCSH--HHHHHHHHHH------------H-TTCCEEEEECCT
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEcCCCHH--HHHHHHHHHH------------h-cCCeEEEEEcCC
Confidence 45899999999999999999999999976 6666554321 1222222111 1 335789999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHHc-CCCceEEEE
Q psy6053 180 EADELAIKESDRQLLAS-------EVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKEM-KHLELFVHI 244 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~-~~~k~~V~v 244 (614)
++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++.+... ..-.++|++
T Consensus 87 ~~~~------~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~i 160 (267)
T 3u5t_A 87 SDPA------AVRRLFATAEEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINM 160 (267)
T ss_dssp TCHH------HHHHHHHHHHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEE
Confidence 9876 6666654 68999999997532 3557788999999999999888752 223589999
Q ss_pred eCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCCEEE
Q psy6053 245 STAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMPCLM 320 (614)
Q Consensus 245 ST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp~~I 320 (614)
||..+..... ....|+.||+..+.+.+..+. .|+++..
T Consensus 161 sS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~ 202 (267)
T 3u5t_A 161 STSQVGLLHP--------------------------------------SYGIYAAAKAGVEAMTHVLSKELRGRDITVNA 202 (267)
T ss_dssp CCTHHHHCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEE
T ss_pred eChhhccCCC--------------------------------------CchHHHHHHHHHHHHHHHHHHHhhhhCCEEEE
Confidence 9986532110 015799999999999887765 5899999
Q ss_pred eecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEec
Q psy6053 321 LRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLT 400 (614)
Q Consensus 321 vRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~ 400 (614)
++||.|..+.... . ........... ......+...+|+|++++.++..... -..++++++.
T Consensus 203 v~PG~v~T~~~~~------~--~~~~~~~~~~~---------~~p~~r~~~pedvA~~v~~L~s~~~~--~itG~~i~vd 263 (267)
T 3u5t_A 203 VAPGPTATDLFLE------G--KSDEVRDRFAK---------LAPLERLGTPQDIAGAVAFLAGPDGA--WVNGQVLRAN 263 (267)
T ss_dssp EEECCBC-------------------CHHHHHT---------SSTTCSCBCHHHHHHHHHHHHSTTTT--TCCSEEEEES
T ss_pred EEECCCcCccccc------c--CCHHHHHHHHh---------cCCCCCCcCHHHHHHHHHHHhCcccc--CccCCEEEeC
Confidence 9999886543110 0 00001111111 11123467789999999988854331 1367888887
Q ss_pred cC
Q psy6053 401 SS 402 (614)
Q Consensus 401 ~~ 402 (614)
+|
T Consensus 264 GG 265 (267)
T 3u5t_A 264 GG 265 (267)
T ss_dssp SS
T ss_pred CC
Confidence 65
No 244
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=99.69 E-value=5.5e-16 Score=154.06 Aligned_cols=202 Identities=10% Similarity=0.069 Sum_probs=145.4
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
.++|+|+||||||+||++++++|++.|++ |+++.|+.... .....++.+|+
T Consensus 5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~---V~~~~r~~~~~--------------------------~~~~~~~~~D~ 55 (241)
T 1dhr_A 5 GEARRVLVYGGRGALGSRCVQAFRARNWW---VASIDVVENEE--------------------------ASASVIVKMTD 55 (241)
T ss_dssp -CCCEEEEETTTSHHHHHHHHHHHTTTCE---EEEEESSCCTT--------------------------SSEEEECCCCS
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhCCCE---EEEEeCChhhc--------------------------cCCcEEEEcCC
Confidence 35789999999999999999999999876 88999976431 12456788999
Q ss_pred CCCCCCCCHHHHHHHhc---------cccEEEEcccccC--------hhHHHHHHHHHhHHHHHHHHHHHHHc-CCCceE
Q psy6053 180 EADELAIKESDRQLLAS---------EVDIMIHGAATIR--------FDEALKKAVLLNTRGTKMMLSLAKEM-KHLELF 241 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~---------~vd~ViH~AA~v~--------~~~~~~~~~~~Nv~gt~~ll~la~~~-~~~k~~ 241 (614)
++++ +++.+++ ++|++||+||... ..+.++..+++|+.|+.++++.+... .+-.++
T Consensus 56 ~~~~------~v~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~i 129 (241)
T 1dhr_A 56 SFTE------QADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLL 129 (241)
T ss_dssp CHHH------HHHHHHHHHHHHHTTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEE
T ss_pred CCHH------HHHHHHHHHHHHhCCCCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEE
Confidence 9865 5665554 6899999999642 23556778999999999999998763 122589
Q ss_pred EEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh------CC
Q psy6053 242 VHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN------NG 315 (614)
Q Consensus 242 V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~------~g 315 (614)
|++||..+..... ....|+.||+..+.+.+..+. .|
T Consensus 130 v~isS~~~~~~~~--------------------------------------~~~~Y~asK~a~~~~~~~la~e~~~~~~g 171 (241)
T 1dhr_A 130 TLAGAKAALDGTP--------------------------------------GMIGYGMAKGAVHQLCQSLAGKNSGMPSG 171 (241)
T ss_dssp EEECCGGGGSCCT--------------------------------------TBHHHHHHHHHHHHHHHHHTSTTSSCCTT
T ss_pred EEECCHHHccCCC--------------------------------------CchHHHHHHHHHHHHHHHHHHHhccCCCC
Confidence 9999987643210 015799999999999887654 36
Q ss_pred CCEEEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCcc
Q psy6053 316 MPCLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQS 395 (614)
Q Consensus 316 lp~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~ 395 (614)
+++++++||.|-.+. ...... .......+|.+|+|++++.++..... ...++
T Consensus 172 i~v~~v~PG~v~T~~-----------------~~~~~~---------~~~~~~~~~~~~vA~~v~~l~~~~~~--~~~G~ 223 (241)
T 1dhr_A 172 AAAIAVLPVTLDTPM-----------------NRKSMP---------EADFSSWTPLEFLVETFHDWITGNKR--PNSGS 223 (241)
T ss_dssp CEEEEEEESCEECHH-----------------HHHHST---------TSCGGGSEEHHHHHHHHHHHHTTTTC--CCTTC
T ss_pred eEEEEEecCcccCcc-----------------ccccCc---------chhhccCCCHHHHHHHHHHHhcCCCc--Cccce
Confidence 999999999874431 111100 11123468899999999988854321 23577
Q ss_pred EEEeccC
Q psy6053 396 IVHLTSS 402 (614)
Q Consensus 396 vyni~~~ 402 (614)
++++.++
T Consensus 224 ~~~v~g~ 230 (241)
T 1dhr_A 224 LIQVVTT 230 (241)
T ss_dssp EEEEEEE
T ss_pred EEEEeCC
Confidence 8888665
No 245
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=99.69 E-value=1.7e-16 Score=161.17 Aligned_cols=221 Identities=11% Similarity=0.101 Sum_probs=149.8
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
+++|+|+||||||+||++++++|++.|.+ |+++.|+. +++++..+ .+ . ...++.++.+|+
T Consensus 27 l~~k~vlVTGas~gIG~aia~~L~~~G~~---V~~~~r~~------~~~~~~~~-----~l----~--~~~~~~~~~~Dv 86 (276)
T 2b4q_A 27 LAGRIALVTGGSRGIGQMIAQGLLEAGAR---VFICARDA------EACADTAT-----RL----S--AYGDCQAIPADL 86 (276)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEECSCH------HHHHHHHH-----HH----T--TSSCEEECCCCT
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCE---EEEEeCCH------HHHHHHHH-----HH----H--hcCceEEEEeeC
Confidence 56899999999999999999999999875 88888863 22222111 11 1 112688999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHHc---CCC----
Q psy6053 180 EADELAIKESDRQLLAS-------EVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKEM---KHL---- 238 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~---- 238 (614)
++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++.+... .+.
T Consensus 87 ~d~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~ 160 (276)
T 2b4q_A 87 SSEA------GARRLAQALGELSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENP 160 (276)
T ss_dssp TSHH------HHHHHHHHHHHHCSCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSC
T ss_pred CCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCC
Confidence 9865 6666654 68999999996432 3567789999999998888776431 133
Q ss_pred ceEEEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCC-chhhhHHHHHHHHHHHhh----
Q psy6053 239 ELFVHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPN-SYAYTKCLSEGLVVEAMN---- 313 (614)
Q Consensus 239 k~~V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn-~Y~~SK~~aE~lv~~~~~---- 313 (614)
.++|++||..+..... ... .|+.||+..|.+.+..+.
T Consensus 161 g~iV~isS~~~~~~~~--------------------------------------~~~~~Y~asK~a~~~~~~~la~e~~~ 202 (276)
T 2b4q_A 161 ARVINIGSVAGISAMG--------------------------------------EQAYAYGPSKAALHQLSRMLAKELVG 202 (276)
T ss_dssp EEEEEECCGGGTCCCC--------------------------------------CSCTTHHHHHHHHHHHHHHHHHHHGG
T ss_pred CEEEEECCHHHcCCCC--------------------------------------CCccccHHHHHHHHHHHHHHHHHhcc
Confidence 7999999987643210 013 799999999998877654
Q ss_pred CCCCEEEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCC
Q psy6053 314 NGMPCLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHR 393 (614)
Q Consensus 314 ~glp~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~ 393 (614)
.|+++++++||.|..+... .+.+ ......... . ......+...+|+|++++.++..... -..
T Consensus 203 ~gI~vn~v~PG~v~T~~~~---~~~~------~~~~~~~~~--~-----~~p~~r~~~p~dvA~~v~~l~s~~~~--~~t 264 (276)
T 2b4q_A 203 EHINVNVIAPGRFPSRMTR---HIAN------DPQALEADS--A-----SIPMGRWGRPEEMAALAISLAGTAGA--YMT 264 (276)
T ss_dssp GTEEEEEEEECCCCSTTTH---HHHH------CHHHHHHHH--H-----TSTTSSCCCHHHHHHHHHHHHSGGGT--TCC
T ss_pred cCeEEEEEEeccCcCcchh---hcch------hHHHHHHhh--c-----CCCCCCcCCHHHHHHHHHHHhCcccc--CCC
Confidence 5899999999988654211 0000 000111110 0 00112367899999999998865431 136
Q ss_pred ccEEEeccC
Q psy6053 394 QSIVHLTSS 402 (614)
Q Consensus 394 ~~vyni~~~ 402 (614)
++++++.++
T Consensus 265 G~~i~vdGG 273 (276)
T 2b4q_A 265 GNVIPIDGG 273 (276)
T ss_dssp SCEEEESTT
T ss_pred CCEEEeCCC
Confidence 788888776
No 246
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=99.69 E-value=2.6e-16 Score=157.51 Aligned_cols=198 Identities=15% Similarity=0.157 Sum_probs=145.3
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCCC
Q psy6053 102 GKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAEA 181 (614)
Q Consensus 102 ~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~~ 181 (614)
+|+|+||||+|+||++++++|++.|.+ |+++.|...... -..+.+|+++
T Consensus 22 ~k~vlITGas~gIG~~la~~l~~~G~~---V~~~~r~~~~~~----------------------------~~~~~~d~~d 70 (251)
T 3orf_A 22 SKNILVLGGSGALGAEVVKFFKSKSWN---TISIDFRENPNA----------------------------DHSFTIKDSG 70 (251)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESSCCTTS----------------------------SEEEECSCSS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEeCCccccc----------------------------ccceEEEeCC
Confidence 689999999999999999999999876 899999864321 1346788887
Q ss_pred CCCCCCHHHHHHHhc-------cccEEEEcccccC--------hhHHHHHHHHHhHHHHHHHHHHHHHc-CCCceEEEEe
Q psy6053 182 DELAIKESDRQLLAS-------EVDIMIHGAATIR--------FDEALKKAVLLNTRGTKMMLSLAKEM-KHLELFVHIS 245 (614)
Q Consensus 182 ~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~--------~~~~~~~~~~~Nv~gt~~ll~la~~~-~~~k~~V~vS 245 (614)
++ +++.+++ ++|+|||+||... ..+.++..+++|+.|+.++++++... ..-.++|++|
T Consensus 71 ~~------~v~~~~~~~~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 144 (251)
T 3orf_A 71 EE------EIKSVIEKINSKSIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTG 144 (251)
T ss_dssp HH------HHHHHHHHHHTTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred HH------HHHHHHHHHHHHcCCCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEe
Confidence 55 6666655 4699999999531 23566778999999999999998863 1224899999
Q ss_pred CceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh------CCCCEE
Q psy6053 246 TAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN------NGMPCL 319 (614)
Q Consensus 246 T~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~------~glp~~ 319 (614)
|..+.... | ....|+.||+..|.+++..+. .|+++.
T Consensus 145 S~~~~~~~----------~----------------------------~~~~Y~~sKaa~~~~~~~la~e~~~~~~gi~v~ 186 (251)
T 3orf_A 145 ASAALNRT----------S----------------------------GMIAYGATKAATHHIIKDLASENGGLPAGSTSL 186 (251)
T ss_dssp CGGGGSCC----------T----------------------------TBHHHHHHHHHHHHHHHHHTSTTSSSCTTCEEE
T ss_pred chhhccCC----------C----------------------------CCchhHHHHHHHHHHHHHHHHHhcccCCCcEEE
Confidence 98764221 0 015799999999999987654 379999
Q ss_pred EeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHh-hhhcCCCCccEEE
Q psy6053 320 MLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWA-YLSQKEHRQSIVH 398 (614)
Q Consensus 320 IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~-~~~~~~~~~~vyn 398 (614)
+++||.|.++. ..... .......+++++|+|++++.++.. ... ...+++++
T Consensus 187 ~v~PG~v~t~~-----------------~~~~~---------~~~~~~~~~~~~dva~~i~~l~~~~~~~--~~tG~~i~ 238 (251)
T 3orf_A 187 GILPVTLDTPT-----------------NRKYM---------SDANFDDWTPLSEVAEKLFEWSTNSDSR--PTNGSLVK 238 (251)
T ss_dssp EEEESCBCCHH-----------------HHHHC---------TTSCGGGSBCHHHHHHHHHHHHHCGGGC--CCTTCEEE
T ss_pred EEecCcCcCcc-----------------hhhhc---------ccccccccCCHHHHHHHHHHHhcCcccc--CCcceEEE
Confidence 99999875432 11111 122334678999999999999877 321 23678888
Q ss_pred eccC
Q psy6053 399 LTSS 402 (614)
Q Consensus 399 i~~~ 402 (614)
+.++
T Consensus 239 v~~g 242 (251)
T 3orf_A 239 FETK 242 (251)
T ss_dssp EEEE
T ss_pred EecC
Confidence 8776
No 247
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=99.69 E-value=1.5e-16 Score=161.79 Aligned_cols=217 Identities=13% Similarity=0.109 Sum_probs=151.3
Q ss_pred ccCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCC
Q psy6053 99 TFTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGD 178 (614)
Q Consensus 99 ~~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gD 178 (614)
.+++|+|+||||||+||++++++|++.|.+ |+++.|+. ++++++.+ + ...++.++.+|
T Consensus 27 ~l~~k~vlVTGas~GIG~aia~~l~~~G~~---Vi~~~r~~------~~~~~~~~---------~----~~~~~~~~~~D 84 (281)
T 3ppi_A 27 QFEGASAIVSGGAGGLGEATVRRLHADGLG---VVIADLAA------EKGKALAD---------E----LGNRAEFVSTN 84 (281)
T ss_dssp GGTTEEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCH------HHHHHHHH---------H----HCTTEEEEECC
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCE---EEEEeCCh------HHHHHHHH---------H----hCCceEEEEcC
Confidence 367899999999999999999999999875 88888863 23332211 0 22478999999
Q ss_pred CCCCCCCCCHHHHHHHhc------cccEEEEcccccC-------------hhHHHHHHHHHhHHHHHHHHHHHHHc----
Q psy6053 179 AEADELAIKESDRQLLAS------EVDIMIHGAATIR-------------FDEALKKAVLLNTRGTKMMLSLAKEM---- 235 (614)
Q Consensus 179 l~~~~lGLs~~~~~~l~~------~vd~ViH~AA~v~-------------~~~~~~~~~~~Nv~gt~~ll~la~~~---- 235 (614)
+++++ +++.+++ ++|++||+||... ..+.++..+++|+.|+.++++++...
T Consensus 85 l~~~~------~v~~~~~~~~~~~~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 158 (281)
T 3ppi_A 85 VTSED------SVLAAIEAANQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAA 158 (281)
T ss_dssp TTCHH------HHHHHHHHHTTSSEEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTS
T ss_pred CCCHH------HHHHHHHHHHHhCCCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhh
Confidence 99866 6666665 6899999955321 12446788999999999999988642
Q ss_pred -----CCCceEEEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHH
Q psy6053 236 -----KHLELFVHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVE 310 (614)
Q Consensus 236 -----~~~k~~V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~ 310 (614)
.+-.++|++||..+..... ....|+.||+..+.+.+.
T Consensus 159 ~~~~~~~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~~~~~ 200 (281)
T 3ppi_A 159 EPRENGERGALVLTASIAGYEGQI--------------------------------------GQTAYAAAKAGVIGLTIA 200 (281)
T ss_dssp CCCTTSCCEEEEEECCGGGTSCCT--------------------------------------TCHHHHHHHHHHHHHHHH
T ss_pred cccccCCCeEEEEEecccccCCCC--------------------------------------CCcccHHHHHHHHHHHHH
Confidence 1335899999987643210 015799999988777766
Q ss_pred Hhh----CCCCEEEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhh
Q psy6053 311 AMN----NGMPCLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAY 386 (614)
Q Consensus 311 ~~~----~glp~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~ 386 (614)
.+. .|+++..++||.|..+... .. . .........+. .....+..++|+|++++.++.+.
T Consensus 201 la~e~~~~gi~v~~v~PG~v~T~~~~-------~~-~-~~~~~~~~~~~--------~~~~~~~~pedvA~~v~~l~s~~ 263 (281)
T 3ppi_A 201 AARDLSSAGIRVNTIAPGTMKTPIME-------SV-G-EEALAKFAANI--------PFPKRLGTPDEFADAAAFLLTNG 263 (281)
T ss_dssp HHHHHGGGTEEEEEEEECSBCCHHHH-------TT-C-HHHHHHHHHTC--------CSSSSCBCHHHHHHHHHHHHHCS
T ss_pred HHHHHhhcCeEEEEEecCcCCchhhh-------cc-c-HHHHHHHHhcC--------CCCCCCCCHHHHHHHHHHHHcCC
Confidence 544 5899999999988654321 11 1 11222222211 11134678999999999998753
Q ss_pred hhcCCCCccEEEeccC
Q psy6053 387 LSQKEHRQSIVHLTSS 402 (614)
Q Consensus 387 ~~~~~~~~~vyni~~~ 402 (614)
. ..++++++.++
T Consensus 264 ~----~tG~~i~vdGG 275 (281)
T 3ppi_A 264 Y----INGEVMRLDGA 275 (281)
T ss_dssp S----CCSCEEEESTT
T ss_pred C----cCCcEEEECCC
Confidence 3 37889999887
No 248
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=99.69 E-value=7.2e-16 Score=154.34 Aligned_cols=215 Identities=13% Similarity=0.105 Sum_probs=149.2
Q ss_pred cccCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeC
Q psy6053 98 ETFTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISG 177 (614)
Q Consensus 98 ~~~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~g 177 (614)
..+++|+|+||||+|+||++++++|++.|.+ |+++.|+. +++++..+ .+... ...++.++.+
T Consensus 8 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~---V~~~~r~~------~~~~~~~~-----~~~~~----~~~~~~~~~~ 69 (252)
T 3f1l_A 8 DLLNDRIILVTGASDGIGREAAMTYARYGAT---VILLGRNE------EKLRQVAS-----HINEE----TGRQPQWFIL 69 (252)
T ss_dssp TTTTTCEEEEESTTSHHHHHHHHHHHHTTCE---EEEEESCH------HHHHHHHH-----HHHHH----HSCCCEEEEC
T ss_pred cccCCCEEEEeCCCChHHHHHHHHHHHCCCE---EEEEeCCH------HHHHHHHH-----HHHhh----cCCCceEEEE
Confidence 3478999999999999999999999999875 88888863 22222211 11111 1236788999
Q ss_pred CC--CCCCCCCCHHHHHHHhc-------cccEEEEcccccC----h----hHHHHHHHHHhHHHHHHHHHHHHHc---CC
Q psy6053 178 DA--EADELAIKESDRQLLAS-------EVDIMIHGAATIR----F----DEALKKAVLLNTRGTKMMLSLAKEM---KH 237 (614)
Q Consensus 178 Dl--~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~----~----~~~~~~~~~~Nv~gt~~ll~la~~~---~~ 237 (614)
|+ ++++ +.+.+++ ++|++||+||... + .+.++..+++|+.|+.++++.+... .+
T Consensus 70 D~~~~~~~------~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~ 143 (252)
T 3f1l_A 70 DLLTCTSE------NCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSD 143 (252)
T ss_dssp CTTTCCHH------HHHHHHHHHHHHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSS
T ss_pred ecccCCHH------HHHHHHHHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCC
Confidence 99 6543 5665554 6899999999642 1 3556788999999999999988431 35
Q ss_pred CceEEEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh---C
Q psy6053 238 LELFVHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN---N 314 (614)
Q Consensus 238 ~k~~V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~---~ 314 (614)
..++|++||..+.... | ....|+.||+..+.+.+..+. .
T Consensus 144 ~g~iv~isS~~~~~~~----------~----------------------------~~~~Y~asK~a~~~l~~~la~e~~~ 185 (252)
T 3f1l_A 144 AGSLVFTSSSVGRQGR----------A----------------------------NWGAYAASKFATEGMMQVLADEYQQ 185 (252)
T ss_dssp SCEEEEECCGGGTSCC----------T----------------------------TCHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred CCEEEEECChhhccCC----------C----------------------------CCchhHHHHHHHHHHHHHHHHHhcC
Confidence 6799999998653221 0 015799999999998887765 2
Q ss_pred CCCEEEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCc
Q psy6053 315 GMPCLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQ 394 (614)
Q Consensus 315 glp~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~ 394 (614)
.+.+..+.||.|-.+. ...... ......+...+|+|++++.++..... -..+
T Consensus 186 ~irvn~v~PG~v~t~~-----------------~~~~~~---------~~~~~~~~~p~dva~~~~~L~s~~~~--~itG 237 (252)
T 3f1l_A 186 RLRVNCINPGGTRTAM-----------------RASAFP---------TEDPQKLKTPADIMPLYLWLMGDDSR--RKTG 237 (252)
T ss_dssp TCEEEEEECCSBSSHH-----------------HHHHCT---------TCCGGGSBCTGGGHHHHHHHHSGGGT--TCCS
T ss_pred CcEEEEEecCcccCch-----------------hhhhCC---------ccchhccCCHHHHHHHHHHHcCcccc--CCCC
Confidence 4888889888774321 111111 11123466789999999988865432 2368
Q ss_pred cEEEeccC
Q psy6053 395 SIVHLTSS 402 (614)
Q Consensus 395 ~vyni~~~ 402 (614)
+++++.+|
T Consensus 238 ~~i~vdgG 245 (252)
T 3f1l_A 238 MTFDAQPG 245 (252)
T ss_dssp CEEESSCC
T ss_pred CEEEeCCC
Confidence 89999887
No 249
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}
Probab=99.69 E-value=1.8e-16 Score=158.96 Aligned_cols=209 Identities=13% Similarity=0.111 Sum_probs=145.6
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
+++|+|+||||||+||++++++|++.|.+ |+++.|+... .+.+.++.+|+
T Consensus 19 l~~k~vlVTGas~gIG~aia~~l~~~G~~---V~~~~r~~~~---------------------------~~~~~~~~~Dl 68 (253)
T 2nm0_A 19 HMSRSVLVTGGNRGIGLAIARAFADAGDK---VAITYRSGEP---------------------------PEGFLAVKCDI 68 (253)
T ss_dssp -CCCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESSSCC---------------------------CTTSEEEECCT
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEeCChHh---------------------------hccceEEEecC
Confidence 56899999999999999999999999875 8888886532 12367899999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHHc---CCCceEE
Q psy6053 180 EADELAIKESDRQLLAS-------EVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKEM---KHLELFV 242 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~V 242 (614)
++++ +++.+++ .+|++||+||.... .+.++..+++|+.|+.++++++... .+..++|
T Consensus 69 ~d~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv 142 (253)
T 2nm0_A 69 TDTE------QVEQAYKEIEETHGPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVV 142 (253)
T ss_dssp TSHH------HHHHHHHHHHHHTCSCSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEE
Confidence 9866 6666655 47999999997532 2456788999999999999877542 2457999
Q ss_pred EEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCCE
Q psy6053 243 HISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMPC 318 (614)
Q Consensus 243 ~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp~ 318 (614)
++||..+..... . ...|+.||+..+.+.+..+. .|+++
T Consensus 143 ~isS~~~~~~~~--------------------------------~------~~~Y~asK~a~~~~~~~la~e~~~~gi~v 184 (253)
T 2nm0_A 143 LISSVVGLLGSA--------------------------------G------QANYAASKAGLVGFARSLARELGSRNITF 184 (253)
T ss_dssp EECCCCCCCCHH--------------------------------H------HHHHHHHHHHHHHHHHHHHHHHCSSSEEE
T ss_pred EECchhhCCCCC--------------------------------C------cHHHHHHHHHHHHHHHHHHHHhhhcCeEE
Confidence 999986532110 0 04799999999888876554 58999
Q ss_pred EEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEE
Q psy6053 319 LMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVH 398 (614)
Q Consensus 319 ~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyn 398 (614)
++++||.|..+.... + . .......... .....++..+|+|++++.++..... -..+.+++
T Consensus 185 n~v~PG~v~T~~~~~---~-----~-~~~~~~~~~~---------~p~~~~~~p~dvA~~i~~l~s~~~~--~~tG~~i~ 244 (253)
T 2nm0_A 185 NVVAPGFVDTDMTKV---L-----T-DEQRANIVSQ---------VPLGRYARPEEIAATVRFLASDDAS--YITGAVIP 244 (253)
T ss_dssp EEEEECSBCC------------------CHHHHHTT---------CTTCSCBCHHHHHHHHHHHHSGGGT--TCCSCEEE
T ss_pred EEEEeCcCcCcchhh---c-----C-HHHHHHHHhc---------CCCCCCcCHHHHHHHHHHHhCcccc--CCcCcEEE
Confidence 999999885543210 0 0 0000111111 0112367899999999988865432 13678888
Q ss_pred eccC
Q psy6053 399 LTSS 402 (614)
Q Consensus 399 i~~~ 402 (614)
+.++
T Consensus 245 vdGG 248 (253)
T 2nm0_A 245 VDGG 248 (253)
T ss_dssp ESTT
T ss_pred ECCc
Confidence 8776
No 250
>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A
Probab=99.68 E-value=2.2e-16 Score=156.70 Aligned_cols=213 Identities=16% Similarity=0.183 Sum_probs=145.8
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCCC
Q psy6053 102 GKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAEA 181 (614)
Q Consensus 102 ~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~~ 181 (614)
+|+|+||||||+||++++++|++.|++ |+++.|+... +.+. . ++.++.+|+++
T Consensus 2 ~k~vlVTGas~giG~~~a~~l~~~G~~---V~~~~r~~~~------~~~~----------------~--~~~~~~~D~~~ 54 (239)
T 2ekp_A 2 ERKALVTGGSRGIGRAIAEALVARGYR---VAIASRNPEE------AAQS----------------L--GAVPLPTDLEK 54 (239)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESSCHH------HHHH----------------H--TCEEEECCTTT
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEeCCHHH------HHHh----------------h--CcEEEecCCch
Confidence 589999999999999999999999875 8899987521 1110 1 26778999998
Q ss_pred CCCCCCHHHHHHH-------hccccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHHc---CCCceEEEE
Q psy6053 182 DELAIKESDRQLL-------ASEVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKEM---KHLELFVHI 244 (614)
Q Consensus 182 ~~lGLs~~~~~~l-------~~~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~V~v 244 (614)
+ +.+.+ ..++|++||+||.... .+.++..+++|+.|+.++++.+... .+..++|++
T Consensus 55 -~------~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~i 127 (239)
T 2ekp_A 55 -D------DPKGLVKRALEALGGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFI 127 (239)
T ss_dssp -S------CHHHHHHHHHHHHTSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred -H------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEE
Confidence 4 33333 2379999999996431 3567788999999999998887431 256899999
Q ss_pred eCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCCEEE
Q psy6053 245 STAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMPCLM 320 (614)
Q Consensus 245 ST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp~~I 320 (614)
||..+..... +++ ...|+.||+..|.+.+.... .|+++++
T Consensus 128 sS~~~~~~~~-------~~~-----------------------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~ 171 (239)
T 2ekp_A 128 GSVTTFTAGG-------PVP-----------------------------IPAYTTAKTALLGLTRALAKEWARLGIRVNL 171 (239)
T ss_dssp CCGGGTSCCT-------TSC-----------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEE
T ss_pred CchhhccCCC-------CCC-----------------------------CccHHHHHHHHHHHHHHHHHHhhhcCcEEEE
Confidence 9987643210 000 15799999999988877654 4899999
Q ss_pred eecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEec
Q psy6053 321 LRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLT 400 (614)
Q Consensus 321 vRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~ 400 (614)
+|||.|.++...... ..+ ......... .....+...+|+|++++.++..... -..++++++.
T Consensus 172 v~Pg~v~t~~~~~~~------~~~-~~~~~~~~~---------~p~~~~~~~~dvA~~~~~l~s~~~~--~~tG~~~~vd 233 (239)
T 2ekp_A 172 LCPGYVETEFTLPLR------QNP-ELYEPITAR---------IPMGRWARPEEIARVAAVLCGDEAE--YLTGQAVAVD 233 (239)
T ss_dssp EEECSBCSGGGHHHH------TCH-HHHHHHHTT---------CTTSSCBCHHHHHHHHHHHTSGGGT--TCCSCEEEES
T ss_pred EEeCCccCchhhccc------cCH-HHHHHHHhc---------CCCCCCcCHHHHHHHHHHHcCchhc--CCCCCEEEEC
Confidence 999998765321100 001 111111111 0112367899999999988754331 1367788887
Q ss_pred cC
Q psy6053 401 SS 402 (614)
Q Consensus 401 ~~ 402 (614)
++
T Consensus 234 gG 235 (239)
T 2ekp_A 234 GG 235 (239)
T ss_dssp TT
T ss_pred CC
Confidence 76
No 251
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=99.68 E-value=6.5e-16 Score=156.84 Aligned_cols=224 Identities=15% Similarity=0.098 Sum_probs=151.2
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
++||+++||||+|+||++++++|++.|.+ |+++.|+..... +-.+++ .. ...++.++.+|+
T Consensus 31 l~gk~~lVTGas~GIG~aia~~la~~G~~---V~~~~r~~~~~~--~~~~~~---------~~-----~~~~~~~~~~Dv 91 (275)
T 4imr_A 31 LRGRTALVTGSSRGIGAAIAEGLAGAGAH---VILHGVKPGSTA--AVQQRI---------IA-----SGGTAQELAGDL 91 (275)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCE---EEEEESSTTTTH--HHHHHH---------HH-----TTCCEEEEECCT
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEcCCHHHHH--HHHHHH---------Hh-----cCCeEEEEEecC
Confidence 57899999999999999999999999875 888999764421 111111 10 235789999999
Q ss_pred CCCCCCCCHHHHHHHhc------cccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHHc---CCCceEEE
Q psy6053 180 EADELAIKESDRQLLAS------EVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKEM---KHLELFVH 243 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~V~ 243 (614)
++++ +.+.+++ ++|++||+||.... .+.++..+++|+.|+.++++.+... .+..++|+
T Consensus 92 ~~~~------~~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~ 165 (275)
T 4imr_A 92 SEAG------AGTDLIERAEAIAPVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVS 165 (275)
T ss_dssp TSTT------HHHHHHHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred CCHH------HHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEE
Confidence 9987 6666554 68999999996421 3567788999999999999887431 24578999
Q ss_pred EeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCCEE
Q psy6053 244 ISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMPCL 319 (614)
Q Consensus 244 vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp~~ 319 (614)
+||..+..... ....|+.||+..+.+.+..+. +|+++.
T Consensus 166 isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn 207 (275)
T 4imr_A 166 IGSINQLRPKS--------------------------------------VVTAYAATKAAQHNLIQSQARDFAGDNVLLN 207 (275)
T ss_dssp ECCGGGTSCCT--------------------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred ECCHHhCCCCC--------------------------------------CchhhHHHHHHHHHHHHHHHHHhcccCcEEE
Confidence 99986543110 014599999999888877655 589999
Q ss_pred EeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEe
Q psy6053 320 MLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHL 399 (614)
Q Consensus 320 IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni 399 (614)
.++||.|..+...... . ..+ .......... ....-+...+|+|++++.++..... -..++++++
T Consensus 208 ~v~PG~v~T~~~~~~~---~--~~~-~~~~~~~~~~--------~p~~r~~~pedvA~~v~fL~s~~a~--~itG~~i~v 271 (275)
T 4imr_A 208 TLAPGLVDTDRNADRR---A--QDP-EGWDEYVRTL--------NWMGRAGRPEEMVGAALFLASEACS--FMTGETIFL 271 (275)
T ss_dssp EEEESSBCSHHHHHHH---H--HCH-HHHHHHHHHH--------STTCSCBCGGGGHHHHHHHHSGGGT--TCCSCEEEE
T ss_pred EEEeccccCccccccc---c--cCh-HHHHHHHhhc--------CccCCCcCHHHHHHHHHHHcCcccC--CCCCCEEEe
Confidence 9999988654211000 0 000 1111111100 0011245689999999988865432 136788888
Q ss_pred ccC
Q psy6053 400 TSS 402 (614)
Q Consensus 400 ~~~ 402 (614)
.+|
T Consensus 272 dGG 274 (275)
T 4imr_A 272 TGG 274 (275)
T ss_dssp SSC
T ss_pred CCC
Confidence 765
No 252
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=99.68 E-value=3.6e-16 Score=159.54 Aligned_cols=200 Identities=15% Similarity=0.139 Sum_probs=139.1
Q ss_pred ccCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCC
Q psy6053 99 TFTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGD 178 (614)
Q Consensus 99 ~~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gD 178 (614)
.+++|+|+||||||+||++++++|++.|++ |+++.|+. ++++++.+ .++.. ...++.++.+|
T Consensus 25 ~~~~k~vlITGasggIG~~la~~l~~~G~~---V~~~~r~~------~~~~~~~~-----~~~~~----~~~~~~~~~~D 86 (286)
T 1xu9_A 25 MLQGKKVIVTGASKGIGREMAYHLAKMGAH---VVVTARSK------ETLQKVVS-----HCLEL----GAASAHYIAGT 86 (286)
T ss_dssp GGTTCEEEESSCSSHHHHHHHHHHHHTTCE---EEEEESCH------HHHHHHHH-----HHHHH----TCSEEEEEECC
T ss_pred hcCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEECCH------HHHHHHHH-----HHHHh----CCCceEEEeCC
Confidence 467899999999999999999999999865 88999864 22222211 11110 12478999999
Q ss_pred CCCCCCCCCHHHHHHHhc-------cccEEEEc-ccccCh------hHHHHHHHHHhHHHHHHHHHHHHHc--CCCceEE
Q psy6053 179 AEADELAIKESDRQLLAS-------EVDIMIHG-AATIRF------DEALKKAVLLNTRGTKMMLSLAKEM--KHLELFV 242 (614)
Q Consensus 179 l~~~~lGLs~~~~~~l~~-------~vd~ViH~-AA~v~~------~~~~~~~~~~Nv~gt~~ll~la~~~--~~~k~~V 242 (614)
+++++ +++.+++ ++|+|||+ |+.... .+.++..+++|+.|+.++++++... .+..++|
T Consensus 87 l~d~~------~v~~~~~~~~~~~g~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~iv 160 (286)
T 1xu9_A 87 MEDMT------FAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIV 160 (286)
T ss_dssp TTCHH------HHHHHHHHHHHHHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEE
T ss_pred CCCHH------HHHHHHHHHHHHcCCCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCCEEE
Confidence 99865 5655554 78999999 454321 3556778999999999999887652 1236899
Q ss_pred EEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh------CCC
Q psy6053 243 HISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN------NGM 316 (614)
Q Consensus 243 ~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~------~gl 316 (614)
++||..+.... | ....|+.||+..|.+++.... .++
T Consensus 161 ~isS~~~~~~~----------~----------------------------~~~~Y~asK~a~~~~~~~l~~e~~~~~~~i 202 (286)
T 1xu9_A 161 VVSSLAGKVAY----------P----------------------------MVAAYSASKFALDGFFSSIRKEYSVSRVNV 202 (286)
T ss_dssp EEEEGGGTSCC----------T----------------------------TCHHHHHHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred EECCcccccCC----------C----------------------------CccHHHHHHHHHHHHHHHHHHHHhhcCCCe
Confidence 99998654321 0 015799999999988765432 489
Q ss_pred CEEEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhh
Q psy6053 317 PCLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAY 386 (614)
Q Consensus 317 p~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~ 386 (614)
.+++++||.|..+. ......+ ......++.+++|++++.++...
T Consensus 203 ~v~~v~Pg~v~t~~-----------------~~~~~~~---------~~~~~~~~~~~vA~~i~~~~~~~ 246 (286)
T 1xu9_A 203 SITLCVLGLIDTET-----------------AMKAVSG---------IVHMQAAPKEECALEIIKGGALR 246 (286)
T ss_dssp EEEEEEECCBCCHH-----------------HHHHSCG---------GGGGGCBCHHHHHHHHHHHHHTT
T ss_pred EEEEeecCccCChh-----------------HHHhccc---------cccCCCCCHHHHHHHHHHHHhcC
Confidence 99999999874431 1111111 12235689999999999888653
No 253
>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*
Probab=99.68 E-value=1.2e-15 Score=152.52 Aligned_cols=213 Identities=12% Similarity=0.158 Sum_probs=142.7
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCCCC
Q psy6053 103 KTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAEAD 182 (614)
Q Consensus 103 ~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~~~ 182 (614)
|+++||||+|+||++++++|++.|.+ |+++.|+. ++++++.+ + ...++.++.+|++++
T Consensus 1 k~vlVTGas~gIG~aia~~l~~~G~~---V~~~~r~~------~~~~~~~~---------~----~~~~~~~~~~Dv~~~ 58 (248)
T 3asu_A 1 MIVLVTGATAGFGECITRRFIQQGHK---VIATGRRQ------ERLQELKD---------E----LGDNLYIAQLDVRNR 58 (248)
T ss_dssp CEEEETTTTSTTHHHHHHHHHHTTCE---EEEEESCH------HHHHHHHH---------H----HCTTEEEEECCTTCH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCE---EEEEeCCH------HHHHHHHH---------H----hcCceEEEEcCCCCH
Confidence 57999999999999999999999876 88888863 23332211 0 124688999999986
Q ss_pred CCCCCHHHHHHHhc-------cccEEEEcccccC----h----hHHHHHHHHHhHHHHHHHHHHHHHc---CCCceEEEE
Q psy6053 183 ELAIKESDRQLLAS-------EVDIMIHGAATIR----F----DEALKKAVLLNTRGTKMMLSLAKEM---KHLELFVHI 244 (614)
Q Consensus 183 ~lGLs~~~~~~l~~-------~vd~ViH~AA~v~----~----~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~V~v 244 (614)
+ +++.+++ ++|++||+||... + .+.++..+++|+.|+.++++.+... .+..++|++
T Consensus 59 ~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~i 132 (248)
T 3asu_A 59 A------AIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINI 132 (248)
T ss_dssp H------HHHHHHHTSCTTTCCCCEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred H------HHHHHHHHHHHhCCCCCEEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEE
Confidence 5 7777765 6899999999642 1 3567788999999999998887631 245799999
Q ss_pred eCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCCEEE
Q psy6053 245 STAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMPCLM 320 (614)
Q Consensus 245 ST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp~~I 320 (614)
||..+.... | ....|+.||+..|.+.+..+. .|+++..
T Consensus 133 sS~~~~~~~----------~----------------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~ 174 (248)
T 3asu_A 133 GSTAGSWPY----------A----------------------------GGNVYGATKAFVRQFSLNLRTDLHGTAVRVTD 174 (248)
T ss_dssp CCGGGTSCC----------T----------------------------TCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEE
T ss_pred ccchhccCC----------C----------------------------CCchHHHHHHHHHHHHHHHHHHhhhcCcEEEE
Confidence 998754221 0 015799999999999877654 5899999
Q ss_pred eecceeec-ccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEe
Q psy6053 321 LRPSIIIP-VWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHL 399 (614)
Q Consensus 321 vRp~~I~g-~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni 399 (614)
++||.|.| +.... ...+..... . ... .....+..+|+|++++.++..... ..+....+
T Consensus 175 v~PG~v~gT~~~~~------~~~~~~~~~----~----~~~----~~~~~~~p~dvA~~v~~l~s~~~~---~~g~~i~v 233 (248)
T 3asu_A 175 IEPGLVGGTEFSNV------RFKGDDGKA----E----KTY----QNTVALTPEDVSEAVWWVSTLPAH---VNINTLEM 233 (248)
T ss_dssp EEECSBCC----------------------------------------CCBCHHHHHHHHHHHHHSCTT---CCCCEEEE
T ss_pred EeccccccCcchhh------cccCchHHH----H----HHH----hccCCCCHHHHHHHHHHHhcCCcc---ceeeEEEE
Confidence 99999974 32110 000000000 0 000 011235889999999998875432 34556665
Q ss_pred ccC
Q psy6053 400 TSS 402 (614)
Q Consensus 400 ~~~ 402 (614)
.+.
T Consensus 234 ~~~ 236 (248)
T 3asu_A 234 MPV 236 (248)
T ss_dssp CCT
T ss_pred ccc
Confidence 443
No 254
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=99.68 E-value=2.2e-16 Score=159.74 Aligned_cols=233 Identities=13% Similarity=0.088 Sum_probs=153.8
Q ss_pred cccCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeC
Q psy6053 98 ETFTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISG 177 (614)
Q Consensus 98 ~~~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~g 177 (614)
..+++|++|||||+|+||++++++|++.|.+ |+++.|.... ..+.+.+.+ + . ...++.++.+
T Consensus 14 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~---V~~~~~~~~~--~~~~~~~~~--------~----~-~~~~~~~~~~ 75 (270)
T 3is3_A 14 GRLDGKVALVTGSGRGIGAAVAVHLGRLGAK---VVVNYANSTK--DAEKVVSEI--------K----A-LGSDAIAIKA 75 (270)
T ss_dssp TCCTTCEEEESCTTSHHHHHHHHHHHHTTCE---EEEEESSCHH--HHHHHHHHH--------H----H-TTCCEEEEEC
T ss_pred CCcCCCEEEEECCCchHHHHHHHHHHHCCCE---EEEEcCCCHH--HHHHHHHHH--------H----h-cCCcEEEEEc
Confidence 3467899999999999999999999999876 7776665321 112222111 1 1 3357899999
Q ss_pred CCCCCCCCCCHHHHHHHhc-------cccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHHc-CCCceEE
Q psy6053 178 DAEADELAIKESDRQLLAS-------EVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKEM-KHLELFV 242 (614)
Q Consensus 178 Dl~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~-~~~k~~V 242 (614)
|+++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++.+... ..-.++|
T Consensus 76 Dv~~~~------~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv 149 (270)
T 3is3_A 76 DIRQVP------EIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIV 149 (270)
T ss_dssp CTTSHH------HHHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEE
T ss_pred CCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEE
Confidence 999976 6666665 68999999997542 3567788999999999999998873 2234899
Q ss_pred EEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCCE
Q psy6053 243 HISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMPC 318 (614)
Q Consensus 243 ~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp~ 318 (614)
++||..+... +.| ....|+.||+..+.+.+..+. +|+++
T Consensus 150 ~isS~~~~~~---------~~~----------------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v 192 (270)
T 3is3_A 150 LTSSNTSKDF---------SVP----------------------------KHSLYSGSKGAVDSFVRIFSKDCGDKKITV 192 (270)
T ss_dssp EECCTTTTTC---------CCT----------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEE
T ss_pred EEeCchhccC---------CCC----------------------------CCchhHHHHHHHHHHHHHHHHHhcccCeEE
Confidence 9999753110 000 015799999999988877654 58999
Q ss_pred EEeecceeecccCCCCc-cccCC--CCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCcc
Q psy6053 319 LMLRPSIIIPVWREPLP-GWTDN--INGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQS 395 (614)
Q Consensus 319 ~IvRp~~I~g~~~~p~~-gw~d~--~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~ 395 (614)
..++||.|.++...... .+... .............. .....+...+|+|++++.++..... -..++
T Consensus 193 n~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~p~~r~~~p~dvA~~v~~L~s~~~~--~itG~ 261 (270)
T 3is3_A 193 NAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHA---------SPLHRNGWPQDVANVVGFLVSKEGE--WVNGK 261 (270)
T ss_dssp EEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHH---------STTCSCBCHHHHHHHHHHHTSGGGT--TCCSC
T ss_pred EEEEeCCccChhhhhhhhhccccccccchHHHHHHHHhc---------CCCCCCCCHHHHHHHHHHHcCCccC--CccCc
Confidence 99999998765321100 00000 01111111111111 1112356799999999988865432 13678
Q ss_pred EEEeccC
Q psy6053 396 IVHLTSS 402 (614)
Q Consensus 396 vyni~~~ 402 (614)
++++.+|
T Consensus 262 ~i~vdGG 268 (270)
T 3is3_A 262 VLTLDGG 268 (270)
T ss_dssp EEEESTT
T ss_pred EEEeCCC
Confidence 8988776
No 255
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=99.68 E-value=4.5e-16 Score=157.77 Aligned_cols=203 Identities=16% Similarity=0.121 Sum_probs=137.0
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
..+|+++||||+|+||++++++|++.|.+ |+++.|.. +++++..+. ...++.++.+|+
T Consensus 26 ~~~k~~lVTGas~GIG~aia~~la~~G~~---V~~~~r~~------~~~~~~~~~-------------~~~~~~~~~~Dv 83 (272)
T 4dyv_A 26 TGKKIAIVTGAGSGVGRAVAVALAGAGYG---VALAGRRL------DALQETAAE-------------IGDDALCVPTDV 83 (272)
T ss_dssp --CCEEEETTTTSHHHHHHHHHHHHTTCE---EEEEESCH------HHHHHHHHH-------------HTSCCEEEECCT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEECCH------HHHHHHHHH-------------hCCCeEEEEecC
Confidence 56899999999999999999999999875 88888863 233332110 224688999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcccccCh--------hHHHHHHHHHhHHHHHHHHHHHHHc---CC--Cc
Q psy6053 180 EADELAIKESDRQLLAS-------EVDIMIHGAATIRF--------DEALKKAVLLNTRGTKMMLSLAKEM---KH--LE 239 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~--------~~~~~~~~~~Nv~gt~~ll~la~~~---~~--~k 239 (614)
++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++.+... .+ -.
T Consensus 84 ~d~~------~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g 157 (272)
T 4dyv_A 84 TDPD------SVRALFTATVEKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGG 157 (272)
T ss_dssp TSHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCc
Confidence 9876 6776665 79999999997421 3567788999999988888876542 11 35
Q ss_pred eEEEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CC
Q psy6053 240 LFVHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NG 315 (614)
Q Consensus 240 ~~V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~g 315 (614)
++|++||..+..... ....|+.||+..+.+.+..+. +|
T Consensus 158 ~IV~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~l~~~la~e~~~~g 199 (272)
T 4dyv_A 158 RIINNGSISATSPRP--------------------------------------YSAPYTATKHAITGLTKSTSLDGRVHD 199 (272)
T ss_dssp EEEEECCSSTTSCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGT
T ss_pred EEEEECchhhcCCCC--------------------------------------CchHHHHHHHHHHHHHHHHHHHhCccC
Confidence 899999986642210 015799999999998877654 58
Q ss_pred CCEEEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhh
Q psy6053 316 MPCLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYL 387 (614)
Q Consensus 316 lp~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~ 387 (614)
+++..++||.|..+...... .+.... ........+..++|+|++++.++..+.
T Consensus 200 I~vn~v~PG~v~T~~~~~~~-----------------~~~~~~--~~~~~~~~~~~pedvA~~v~fL~s~~~ 252 (272)
T 4dyv_A 200 IACGQIDIGNADTPMAQKMK-----------------AGVPQA--DLSIKVEPVMDVAHVASAVVYMASLPL 252 (272)
T ss_dssp EEEEEEEEEECC-------------------------------------------CHHHHHHHHHHHHHSCT
T ss_pred EEEEEEEECcccChhhhhhc-----------------ccchhh--hhcccccCCCCHHHHHHHHHHHhCCCC
Confidence 99999999998665322110 000000 000112236789999999999998765
No 256
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=99.68 E-value=1.1e-15 Score=154.24 Aligned_cols=233 Identities=11% Similarity=0.027 Sum_probs=152.8
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
+++|+++||||+|+||++++++|++.|.+ |++..|+.. ++++..+ .+....+ ..++.++.+|+
T Consensus 6 l~~k~~lVTGas~GIG~aia~~l~~~G~~---V~~~~r~~~------~~~~~~~-----~l~~~~~---~~~~~~~~~Dv 68 (265)
T 3lf2_A 6 LSEAVAVVTGGSSGIGLATVELLLEAGAA---VAFCARDGE------RLRAAES-----ALRQRFP---GARLFASVCDV 68 (265)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCE---EEEEESCHH------HHHHHHH-----HHHHHST---TCCEEEEECCT
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCCE---EEEEeCCHH------HHHHHHH-----HHHHhcC---CceEEEEeCCC
Confidence 56899999999999999999999999876 888888632 2222111 1111111 24589999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHHc---CCCceEE
Q psy6053 180 EADELAIKESDRQLLAS-------EVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKEM---KHLELFV 242 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~V 242 (614)
++++ +.+.+++ ++|++||+||.... .+.++..+++|+.|+.++++.+... .+..++|
T Consensus 69 ~~~~------~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv 142 (265)
T 3lf2_A 69 LDAL------QVRAFAEACERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIV 142 (265)
T ss_dssp TCHH------HHHHHHHHHHHHHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEE
Confidence 9865 6666554 68999999997432 3567788999999999999988652 2346899
Q ss_pred EEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCCE
Q psy6053 243 HISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMPC 318 (614)
Q Consensus 243 ~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp~ 318 (614)
++||..+..... ....|+.||+..+.+.+..+. +|+++
T Consensus 143 ~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gi~v 184 (265)
T 3lf2_A 143 CVNSLLASQPEP--------------------------------------HMVATSAARAGVKNLVRSMAFEFAPKGVRV 184 (265)
T ss_dssp EEEEGGGTSCCT--------------------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred EECCcccCCCCC--------------------------------------CchhhHHHHHHHHHHHHHHHHHhcccCeEE
Confidence 999986542210 015799999999888876654 58999
Q ss_pred EEeecceeecccCCCCcccc-CCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEE
Q psy6053 319 LMLRPSIIIPVWREPLPGWT-DNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIV 397 (614)
Q Consensus 319 ~IvRp~~I~g~~~~p~~gw~-d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vy 397 (614)
..++||.|.++......... .....+.......... .......+...+|+|++++.++..... -..++++
T Consensus 185 n~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~p~~r~~~pedvA~~v~fL~s~~~~--~itG~~i 255 (265)
T 3lf2_A 185 NGILIGLVESGQWRRRFEAREERELDWAQWTAQLARN-------KQIPLGRLGKPIEAARAILFLASPLSA--YTTGSHI 255 (265)
T ss_dssp EEEEECSBCCHHHHHHHTC------CHHHHHHHHHHH-------TTCTTCSCBCHHHHHHHHHHHHSGGGT--TCCSEEE
T ss_pred EEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhc-------cCCCcCCCcCHHHHHHHHHHHhCchhc--CcCCCEE
Confidence 99999988665211000000 0000111111111110 001112356789999999988865432 2368899
Q ss_pred EeccC
Q psy6053 398 HLTSS 402 (614)
Q Consensus 398 ni~~~ 402 (614)
++.++
T Consensus 256 ~vdGG 260 (265)
T 3lf2_A 256 DVSGG 260 (265)
T ss_dssp EESSS
T ss_pred EECCC
Confidence 88876
No 257
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=99.67 E-value=2e-15 Score=150.95 Aligned_cols=223 Identities=15% Similarity=0.171 Sum_probs=151.2
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
+++|+|+||||+|+||++++++|++.|.. |+++.+.... ...+..+++ . . ...++.++.+|+
T Consensus 5 l~~k~vlITGas~gIG~~~a~~l~~~G~~---v~~~~~~~~~-~~~~~~~~~---------~----~-~~~~~~~~~~D~ 66 (255)
T 3icc_A 5 LKGKVALVTGASRGIGRAIAKRLANDGAL---VAIHYGNRKE-EAEETVYEI---------Q----S-NGGSAFSIGANL 66 (255)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTCE---EEEEESSCSH-HHHHHHHHH---------H----H-TTCEEEEEECCT
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCe---EEEEeCCchH-HHHHHHHHH---------H----h-cCCceEEEecCc
Confidence 57899999999999999999999999875 6666544321 111211221 1 1 335788999999
Q ss_pred CCCCCCCCHHHHHHHhc-------------cccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHHc-CCC
Q psy6053 180 EADELAIKESDRQLLAS-------------EVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKEM-KHL 238 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~-------------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~-~~~ 238 (614)
++++ +.+.+++ .+|++||+||.... .+.++..+++|+.|+.++++.+... .+.
T Consensus 67 ~~~~------~~~~~~~~~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~ 140 (255)
T 3icc_A 67 ESLH------GVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDN 140 (255)
T ss_dssp TSHH------HHHHHHHHHHHHHHHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEE
T ss_pred CCHH------HHHHHHHHHHHHhcccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCC
Confidence 9865 5555443 29999999996421 3456778999999999999998762 233
Q ss_pred ceEEEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----C
Q psy6053 239 ELFVHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----N 314 (614)
Q Consensus 239 k~~V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~ 314 (614)
.++|++||..+.... | ....|+.||+..+.+.+..+. +
T Consensus 141 ~~iv~isS~~~~~~~----------~----------------------------~~~~Y~asKaa~~~~~~~la~e~~~~ 182 (255)
T 3icc_A 141 SRIINISSAATRISL----------P----------------------------DFIAYSMTKGAINTMTFTLAKQLGAR 182 (255)
T ss_dssp EEEEEECCGGGTSCC----------T----------------------------TBHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred CEEEEeCChhhccCC----------C----------------------------CcchhHHhHHHHHHHHHHHHHHHHhc
Confidence 589999998653321 0 015799999999988876654 5
Q ss_pred CCCEEEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCc
Q psy6053 315 GMPCLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQ 394 (614)
Q Consensus 315 glp~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~ 394 (614)
|+++..++||.|..+..... ............ ......+..++|+|++++.++..... -..+
T Consensus 183 gi~v~~v~PG~v~t~~~~~~-------~~~~~~~~~~~~---------~~~~~~~~~~~dva~~~~~l~s~~~~--~~tG 244 (255)
T 3icc_A 183 GITVNAILPGFVKTDMNAEL-------LSDPMMKQYATT---------ISAFNRLGEVEDIADTAAFLASPDSR--WVTG 244 (255)
T ss_dssp TCEEEEEEECCBCCSSSTTT-------TTSHHHHHHHHH---------TSTTSSCBCHHHHHHHHHHHHSGGGT--TCCS
T ss_pred CeEEEEEEEeeecccchhhh-------cccHHHHHhhhc---------cCCcCCCCCHHHHHHHHHHHhCcccC--CccC
Confidence 89999999999976543221 111111111111 11123466899999999888754432 2368
Q ss_pred cEEEeccC
Q psy6053 395 SIVHLTSS 402 (614)
Q Consensus 395 ~vyni~~~ 402 (614)
+++++.++
T Consensus 245 ~~i~vdgG 252 (255)
T 3icc_A 245 QLIDVSGG 252 (255)
T ss_dssp CEEEESSS
T ss_pred CEEEecCC
Confidence 89999877
No 258
>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*
Probab=99.67 E-value=7.1e-16 Score=168.81 Aligned_cols=227 Identities=15% Similarity=0.159 Sum_probs=157.8
Q ss_pred cccCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeC
Q psy6053 98 ETFTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISG 177 (614)
Q Consensus 98 ~~~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~g 177 (614)
.+-.+++||||||||+||.+++++|++.|.. +|+++.|+.......+++.+.+ . . ...++.++.+
T Consensus 222 ~~~~~~~vLITGgtGgIG~~la~~La~~G~~--~vvl~~R~~~~~~~~~~l~~~l--------~----~-~g~~v~~~~~ 286 (486)
T 2fr1_A 222 EWKPTGTVLVTGGTGGVGGQIARWLARRGAP--HLLLVSRSGPDADGAGELVAEL--------E----A-LGARTTVAAC 286 (486)
T ss_dssp CCCCCSEEEEETTTSHHHHHHHHHHHHHTCS--EEEEEESSGGGSTTHHHHHHHH--------H----H-TTCEEEEEEC
T ss_pred CcCCCCEEEEECCCCHHHHHHHHHHHHcCCC--EEEEEcCCCCCcHHHHHHHHHH--------H----h-cCCEEEEEEe
Confidence 3456899999999999999999999999864 5889999764322222222111 1 1 2357899999
Q ss_pred CCCCCCCCCCHHHHHHHhccc------cEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEE
Q psy6053 178 DAEADELAIKESDRQLLASEV------DIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKEMKHLELFVHI 244 (614)
Q Consensus 178 Dl~~~~lGLs~~~~~~l~~~v------d~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~v 244 (614)
|+++++ ++..+++++ |+|||+||.... .+.++..+++|+.|+.++++++... ++++||++
T Consensus 287 Dv~d~~------~v~~~~~~i~~~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~-~~~~~V~~ 359 (486)
T 2fr1_A 287 DVTDRE------SVRELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTREL-DLTAFVLF 359 (486)
T ss_dssp CTTCHH------HHHHHHHTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTS-CCSEEEEE
T ss_pred CCCCHH------HHHHHHHHHHhcCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcC-CCCEEEEE
Confidence 999866 788887765 999999997542 3456778899999999999999884 78999999
Q ss_pred eCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhhCCCCEEEeecc
Q psy6053 245 STAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMNNGMPCLMLRPS 324 (614)
Q Consensus 245 ST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~~glp~~IvRp~ 324 (614)
||..+..... ....|+.+|...+.+..+....|+++++++||
T Consensus 360 SS~a~~~g~~--------------------------------------g~~~Yaaaka~l~~la~~~~~~gi~v~~i~pG 401 (486)
T 2fr1_A 360 SSFASAFGAP--------------------------------------GLGGYAPGNAYLDGLAQQRRSDGLPATAVAWG 401 (486)
T ss_dssp EEHHHHTCCT--------------------------------------TCTTTHHHHHHHHHHHHHHHHTTCCCEEEEEC
T ss_pred cChHhcCCCC--------------------------------------CCHHHHHHHHHHHHHHHHHHhcCCeEEEEECC
Confidence 9985422110 01579999999999887766679999999999
Q ss_pred eeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEeccCCc
Q psy6053 325 IIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLTSSQE 404 (614)
Q Consensus 325 ~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~~~~~ 404 (614)
.+.+... ........ -.......++.+++++++..++.... . .+.+
T Consensus 402 ~~~~~gm----------------~~~~~~~~------~~~~g~~~i~~e~~a~~l~~~l~~~~------~-~~~v----- 447 (486)
T 2fr1_A 402 TWAGSGM----------------AEGPVADR------FRRHGVIEMPPETACRALQNALDRAE------V-CPIV----- 447 (486)
T ss_dssp CBC----------------------------------CTTTTEECBCHHHHHHHHHHHHHTTC------S-SCEE-----
T ss_pred eeCCCcc----------------cchhHHHH------HHhcCCCCCCHHHHHHHHHHHHhCCC------C-eEEE-----
Confidence 8755310 00000000 01123457899999999999886532 1 1222
Q ss_pred ccccHHHHHHHHhh
Q psy6053 405 WQVSWQEIIDIGKS 418 (614)
Q Consensus 405 ~~it~~e~~~~~~~ 418 (614)
.++.|..+...+..
T Consensus 448 ~~~d~~~~~~~~~~ 461 (486)
T 2fr1_A 448 IDVRWDRFLLAYTA 461 (486)
T ss_dssp CEECHHHHHHHHTS
T ss_pred EeCCHHHHhhhhcc
Confidence 23678887665543
No 259
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=99.67 E-value=1.2e-15 Score=151.27 Aligned_cols=193 Identities=17% Similarity=0.225 Sum_probs=136.5
Q ss_pred CCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCC
Q psy6053 101 TGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAE 180 (614)
Q Consensus 101 ~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~ 180 (614)
.+|+|+||||+|+||++++++|++.|.+ |+++.|+. +++++..+ + ...++.++.+|++
T Consensus 2 s~k~vlVTGas~GIG~a~a~~l~~~G~~---V~~~~r~~------~~~~~~~~---------~----~~~~~~~~~~D~~ 59 (235)
T 3l6e_A 2 SLGHIIVTGAGSGLGRALTIGLVERGHQ---VSMMGRRY------QRLQQQEL---------L----LGNAVIGIVADLA 59 (235)
T ss_dssp -CCEEEEESTTSHHHHHHHHHHHHTTCE---EEEEESCH------HHHHHHHH---------H----HGGGEEEEECCTT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEECCH------HHHHHHHH---------H----hcCCceEEECCCC
Confidence 4789999999999999999999999875 88888863 23332211 0 1135889999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHHc--CCCceEEEE
Q psy6053 181 ADELAIKESDRQLLAS-------EVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKEM--KHLELFVHI 244 (614)
Q Consensus 181 ~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~--~~~k~~V~v 244 (614)
+++ +++.+++ .+|++||+||.... .+.++..+++|+.|+.++++.+... .+-.++|++
T Consensus 60 ~~~------~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~i 133 (235)
T 3l6e_A 60 HHE------DVDVAFAAAVEWGGLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERGGVLANV 133 (235)
T ss_dssp SHH------HHHHHHHHHHHHHCSCSEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEE
T ss_pred CHH------HHHHHHHHHHHhcCCCcEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEE
Confidence 865 6666654 57999999997532 3567788999999999998888542 112389999
Q ss_pred eCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCCEEE
Q psy6053 245 STAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMPCLM 320 (614)
Q Consensus 245 ST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp~~I 320 (614)
||..+..... . ...|+.||+..+.+.+..+. .|+.+..
T Consensus 134 sS~~~~~~~~----------~----------------------------~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~ 175 (235)
T 3l6e_A 134 LSSAAQVGKA----------N----------------------------ESLYCASKWGMRGFLESLRAELKDSPLRLVN 175 (235)
T ss_dssp CCEECCSSCS----------S----------------------------HHHHHHHHHHHHHHHHHHHHHTTTSSEEEEE
T ss_pred eCHHhcCCCC----------C----------------------------CcHHHHHHHHHHHHHHHHHHHhhccCCEEEE
Confidence 9986543211 0 14799999999988887664 5899999
Q ss_pred eecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhh
Q psy6053 321 LRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAY 386 (614)
Q Consensus 321 vRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~ 386 (614)
++||.|-.+... ... . .....+...+|+|++++.++..+
T Consensus 176 v~PG~v~T~~~~-------~~~----------~----------~~~~~~~~pedvA~~v~~l~~~~ 214 (235)
T 3l6e_A 176 LYPSGIRSEFWD-------NTD----------H----------VDPSGFMTPEDAAAYMLDALEAR 214 (235)
T ss_dssp EEEEEECCCC--------------------------------------CBCHHHHHHHHHHHTCCC
T ss_pred EeCCCccCcchh-------ccC----------C----------CCCcCCCCHHHHHHHHHHHHhCC
Confidence 999988543211 000 0 00114678999999999888643
No 260
>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}
Probab=99.67 E-value=1.2e-15 Score=167.78 Aligned_cols=226 Identities=15% Similarity=0.200 Sum_probs=158.3
Q ss_pred ccCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHH-HHHHhChhhHHhhhhccccccCeEEEEeC
Q psy6053 99 TFTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRI-EELFASPLFNLLKSVHGQKIIDKVLPISG 177 (614)
Q Consensus 99 ~~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl-~~~~~~~~f~~l~~~~p~~~~~~v~~v~g 177 (614)
+-.+++||||||||+||.+++++|++.|.. +|+++.|+.......+.+ +++ . . ...++.++.+
T Consensus 256 ~~~~~~vLITGgtGgIG~~lA~~La~~G~~--~vvl~~R~~~~~~~~~~l~~~l---------~----~-~g~~v~~~~~ 319 (511)
T 2z5l_A 256 WQPSGTVLITGGMGAIGRRLARRLAAEGAE--RLVLTSRRGPEAPGAAELAEEL---------R----G-HGCEVVHAAC 319 (511)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHTTCS--EEEEEESSGGGSTTHHHHHHHH---------H----T-TTCEEEEEEC
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhCCCc--EEEEEecCCcccHHHHHHHHHH---------H----h-cCCEEEEEEe
Confidence 456799999999999999999999999864 588889975332212222 222 1 1 2357999999
Q ss_pred CCCCCCCCCCHHHHHHHhcc--ccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEeCce
Q psy6053 178 DAEADELAIKESDRQLLASE--VDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKEMKHLELFVHISTAY 248 (614)
Q Consensus 178 Dl~~~~lGLs~~~~~~l~~~--vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vST~~ 248 (614)
|+++++ +++.++++ +|+|||+||.... .+.++..+++|+.|+.++.+++..+.++++||++||..
T Consensus 320 Dvtd~~------~v~~~~~~~~ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~~V~~SS~a 393 (511)
T 2z5l_A 320 DVAERD------ALAALVTAYPPNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDAFVLFSSVT 393 (511)
T ss_dssp CSSCHH------HHHHHHHHSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCCEEEEEEGG
T ss_pred CCCCHH------HHHHHHhcCCCcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeCHH
Confidence 999866 78888875 9999999997643 24567789999999999999988743678999999985
Q ss_pred eccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhhCCCCEEEeecceeec
Q psy6053 249 CHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMNNGMPCLMLRPSIIIP 328 (614)
Q Consensus 249 ~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~~glp~~IvRp~~I~g 328 (614)
+.... + ....|+.+|+..|.+..+....|+++++++||.+.+
T Consensus 394 ~~~g~----------~----------------------------g~~~YaaaKa~ld~la~~~~~~gi~v~sv~pG~~~~ 435 (511)
T 2z5l_A 394 GTWGN----------A----------------------------GQGAYAAANAALDALAERRRAAGLPATSVAWGLWGG 435 (511)
T ss_dssp GTTCC----------T----------------------------TBHHHHHHHHHHHHHHHHHHTTTCCCEEEEECCBCS
T ss_pred hcCCC----------C----------------------------CCHHHHHHHHHHHHHHHHHHHcCCcEEEEECCcccC
Confidence 42211 0 015799999999999987766799999999997732
Q ss_pred ccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEeccCCccccc
Q psy6053 329 VWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLTSSQEWQVS 408 (614)
Q Consensus 329 ~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~~~~~~~it 408 (614)
. |...+ ... ..+. ......++.+++++++..++.... . .+.+. .+.
T Consensus 436 t------gm~~~---~~~--~~~~-----------~~g~~~l~~e~~a~~l~~al~~~~------~-~v~v~-----~~d 481 (511)
T 2z5l_A 436 G------GMAAG---AGE--ESLS-----------RRGLRAMDPDAAVDALLGAMGRND------V-CVTVV-----DVD 481 (511)
T ss_dssp T------TCCCC---HHH--HHHH-----------HHTBCCBCHHHHHHHHHHHHHHTC------S-EEEEC-----CBC
T ss_pred C------ccccc---ccH--HHHH-----------hcCCCCCCHHHHHHHHHHHHhCCC------C-EEEEE-----eCC
Confidence 2 11111 100 0110 111346889999999999886542 2 22232 257
Q ss_pred HHHHHHHHhh
Q psy6053 409 WQEIIDIGKS 418 (614)
Q Consensus 409 ~~e~~~~~~~ 418 (614)
|..+......
T Consensus 482 ~~~~~~~~~~ 491 (511)
T 2z5l_A 482 WERFAPATNA 491 (511)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHhhhcc
Confidence 8777766543
No 261
>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}
Probab=99.67 E-value=6.9e-16 Score=151.46 Aligned_cols=202 Identities=9% Similarity=-0.013 Sum_probs=144.2
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
+++|+++||||+|+||++++++|++.|.+ |+++.|.. . +|+
T Consensus 4 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~---V~~~~r~~----------------------------~--------~D~ 44 (223)
T 3uce_A 4 SDKTVYVVLGGTSGIGAELAKQLESEHTI---VHVASRQT----------------------------G--------LDI 44 (223)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHCSTTEE---EEEESGGG----------------------------T--------CCT
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEecCCc----------------------------c--------cCC
Confidence 46899999999999999999999999865 88887752 1 688
Q ss_pred CCCCCCCCHHHHHHHhc---cccEEEEcccccC--------hhHHHHHHHHHhHHHHHHHHHHHHHc-CCCceEEEEeCc
Q psy6053 180 EADELAIKESDRQLLAS---EVDIMIHGAATIR--------FDEALKKAVLLNTRGTKMMLSLAKEM-KHLELFVHISTA 247 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~---~vd~ViH~AA~v~--------~~~~~~~~~~~Nv~gt~~ll~la~~~-~~~k~~V~vST~ 247 (614)
++++ +++++++ ++|++||+||... ..+.++..+++|+.|+.++++.+... .+-.++|++||.
T Consensus 45 ~~~~------~v~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~ 118 (223)
T 3uce_A 45 SDEK------SVYHYFETIGAFDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGM 118 (223)
T ss_dssp TCHH------HHHHHHHHHCSEEEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCG
T ss_pred CCHH------HHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecch
Confidence 8765 6666665 6899999999651 13567788999999999999998763 122489999998
Q ss_pred eeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh--CCCCEEEeecce
Q psy6053 248 YCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN--NGMPCLMLRPSI 325 (614)
Q Consensus 248 ~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~--~glp~~IvRp~~ 325 (614)
.+..... ....|+.||+..|.+.+..+. ..+++..++||.
T Consensus 119 ~~~~~~~--------------------------------------~~~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~ 160 (223)
T 3uce_A 119 LSRKVVA--------------------------------------NTYVKAAINAAIEATTKVLAKELAPIRVNAISPGL 160 (223)
T ss_dssp GGTSCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEECS
T ss_pred hhccCCC--------------------------------------CchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCC
Confidence 6543210 015799999999999988776 349999999999
Q ss_pred eecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEeccC
Q psy6053 326 IIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLTSS 402 (614)
Q Consensus 326 I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~~~ 402 (614)
|.++....... .....+......+ .....+..++|+|++++.++.... ..++++++.++
T Consensus 161 v~t~~~~~~~~-----~~~~~~~~~~~~~---------~~~~~~~~~~dvA~~~~~l~~~~~----~tG~~i~vdgG 219 (223)
T 3uce_A 161 TKTEAYKGMNA-----DDRDAMYQRTQSH---------LPVGKVGEASDIAMAYLFAIQNSY----MTGTVIDVDGG 219 (223)
T ss_dssp BCSGGGTTSCH-----HHHHHHHHHHHHH---------STTCSCBCHHHHHHHHHHHHHCTT----CCSCEEEESTT
T ss_pred Ccchhhhhcch-----hhHHHHHHHHhhc---------CCCCCccCHHHHHHHHHHHccCCC----CCCcEEEecCC
Confidence 97764321110 0011112222111 112346789999999999887433 37889999887
No 262
>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}
Probab=99.66 E-value=1.2e-16 Score=159.25 Aligned_cols=207 Identities=21% Similarity=0.166 Sum_probs=128.5
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
+++|+|+||||+|+||++++++|++ |.. |+++.|.. ++++++. ...++.++.+|+
T Consensus 3 l~~k~vlITGas~gIG~~~a~~l~~-g~~---v~~~~r~~------~~~~~~~---------------~~~~~~~~~~D~ 57 (245)
T 3e9n_A 3 LKKKIAVVTGATGGMGIEIVKDLSR-DHI---VYALGRNP------EHLAALA---------------EIEGVEPIESDI 57 (245)
T ss_dssp ---CEEEEESTTSHHHHHHHHHHTT-TSE---EEEEESCH------HHHHHHH---------------TSTTEEEEECCH
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHhC-CCe---EEEEeCCH------HHHHHHH---------------hhcCCcceeccc
Confidence 4579999999999999999999987 654 88888863 2333321 124688899999
Q ss_pred CCCCCCCCHHHHHHH---hccccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHHc---CCCceEEEEeC
Q psy6053 180 EADELAIKESDRQLL---ASEVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKEM---KHLELFVHIST 246 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l---~~~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~V~vST 246 (614)
+++.. .+..... ..++|++||+||.... .+.++..+++|+.|+.++++.+... .+ .++|++||
T Consensus 58 ~~~~~---~~~~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~isS 133 (245)
T 3e9n_A 58 VKEVL---EEGGVDKLKNLDHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS-GCVIYINS 133 (245)
T ss_dssp HHHHH---TSSSCGGGTTCSCCSEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEC-
T ss_pred chHHH---HHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEcC
Confidence 87531 0011111 2368999999997532 2456678999999988888776431 12 68999999
Q ss_pred ceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCCEEEee
Q psy6053 247 AYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMPCLMLR 322 (614)
Q Consensus 247 ~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp~~IvR 322 (614)
..+..... ....|+.||+..|.+.+..+. .|+++.+++
T Consensus 134 ~~~~~~~~--------------------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~ 175 (245)
T 3e9n_A 134 GAGNGPHP--------------------------------------GNTIYAASKHALRGLADAFRKEEANNGIRVSTVS 175 (245)
T ss_dssp -----------------------------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEE
T ss_pred cccccCCC--------------------------------------CchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEe
Confidence 87643210 015799999999998877654 589999999
Q ss_pred cceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEec
Q psy6053 323 PSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLT 400 (614)
Q Consensus 323 p~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~ 400 (614)
||.|.++...... +. . +.......++.++|+|++++.++.... .+.+||+.
T Consensus 176 PG~v~t~~~~~~~---~~----------~---------~~~~~~~~~~~p~dvA~~i~~l~~~~~-----~~~~~~i~ 226 (245)
T 3e9n_A 176 PGPTNTPMLQGLM---DS----------Q---------GTNFRPEIYIEPKEIANAIRFVIDAGE-----TTQITNVD 226 (245)
T ss_dssp ECCC--------------------------------------CCGGGSCHHHHHHHHHHHHTSCT-----TEEEEEEE
T ss_pred cCCccCchhhhhh---hh----------h---------hcccccccCCCHHHHHHHHHHHHcCCC-----ccceeeeE
Confidence 9998765321100 00 0 011112347889999999999986543 56788775
No 263
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=99.66 E-value=1.4e-15 Score=149.89 Aligned_cols=192 Identities=16% Similarity=0.178 Sum_probs=136.0
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCCCC
Q psy6053 103 KTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAEAD 182 (614)
Q Consensus 103 ~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~~~ 182 (614)
|+||||||+|+||++++++|++.|.+ |+++.|+. +++++..+. ...++.++.+|++++
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~G~~---V~~~~r~~------~~~~~~~~~-------------~~~~~~~~~~D~~~~ 59 (230)
T 3guy_A 2 SLIVITGASSGLGAELAKLYDAEGKA---TYLTGRSE------SKLSTVTNC-------------LSNNVGYRARDLASH 59 (230)
T ss_dssp -CEEEESTTSHHHHHHHHHHHHTTCC---EEEEESCH------HHHHHHHHT-------------CSSCCCEEECCTTCH
T ss_pred CEEEEecCCchHHHHHHHHHHHCCCE---EEEEeCCH------HHHHHHHHH-------------HhhccCeEeecCCCH
Confidence 67999999999999999999999976 88888863 333333221 235688999999986
Q ss_pred CCCCCHHHHHHHhccc----cEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHHc--CCCceEEEEeCcee
Q psy6053 183 ELAIKESDRQLLASEV----DIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKEM--KHLELFVHISTAYC 249 (614)
Q Consensus 183 ~lGLs~~~~~~l~~~v----d~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~--~~~k~~V~vST~~~ 249 (614)
+ +++.+++++ |+|||+||.... .+.++..+++|+.|+.++++.+... ++-.++|++||..+
T Consensus 60 ~------~v~~~~~~~~~~~d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~ 133 (230)
T 3guy_A 60 Q------EVEQLFEQLDSIPSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAA 133 (230)
T ss_dssp H------HHHHHHHSCSSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGG
T ss_pred H------HHHHHHHHHhhcCCEEEEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeeccc
Confidence 6 788887765 899999996431 3567788999999999999988663 11238999999866
Q ss_pred ccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCCEEEeecce
Q psy6053 250 HLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMPCLMLRPSI 325 (614)
Q Consensus 250 ~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp~~IvRp~~ 325 (614)
..... ....|+.||+..+.+.+..+. +|+.+..++||.
T Consensus 134 ~~~~~--------------------------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~ 175 (230)
T 3guy_A 134 QQPKA--------------------------------------QESTYCAVKWAVKGLIESVRLELKGKPMKIIAVYPGG 175 (230)
T ss_dssp TSCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEECC
T ss_pred CCCCC--------------------------------------CCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEECCc
Confidence 43210 015799999999998887665 589999999998
Q ss_pred eecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhh
Q psy6053 326 IIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAY 386 (614)
Q Consensus 326 I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~ 386 (614)
|..+.... .. .......+.+++|+|++++.++..+
T Consensus 176 v~t~~~~~-----------------~~---------~~~~~~~~~~~~dvA~~i~~l~~~~ 210 (230)
T 3guy_A 176 MATEFWET-----------------SG---------KSLDTSSFMSAEDAALMIHGALANI 210 (230)
T ss_dssp C------------------------------------------CCCHHHHHHHHHHHCCEE
T ss_pred ccChHHHh-----------------cC---------CCCCcccCCCHHHHHHHHHHHHhCc
Confidence 85542110 00 0011235688999999999887543
No 264
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=99.66 E-value=7.9e-16 Score=157.17 Aligned_cols=224 Identities=12% Similarity=0.095 Sum_probs=148.0
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
+++|+++||||+|+||++++++|++.|.+ |+++.|... ++++++.+ .+... ...++.++.+|+
T Consensus 21 l~~k~~lVTGas~gIG~aia~~L~~~G~~---V~~~~r~~~-----~~~~~~~~-----~l~~~----~~~~~~~~~~Dv 83 (288)
T 2x9g_A 21 MEAPAAVVTGAAKRIGRAIAVKLHQTGYR---VVIHYHNSA-----EAAVSLAD-----ELNKE----RSNTAVVCQADL 83 (288)
T ss_dssp -CCCEEEETTCSSHHHHHHHHHHHHHTCE---EEEEESSCH-----HHHHHHHH-----HHHHH----STTCEEEEECCC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCe---EEEEeCCch-----HHHHHHHH-----HHHhh----cCCceEEEEeec
Confidence 67899999999999999999999999875 888888741 12221111 11100 235788999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcccccC-----------------hhHHHHHHHHHhHHHHHHHHHHHHHc
Q psy6053 180 EADELAIKESDRQLLAS-------EVDIMIHGAATIR-----------------FDEALKKAVLLNTRGTKMMLSLAKEM 235 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~-----------------~~~~~~~~~~~Nv~gt~~ll~la~~~ 235 (614)
++++. ..++++.+++ ++|++||+||... ..+.++..+++|+.|+..+++.+...
T Consensus 84 ~~~~~--~~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~ 161 (288)
T 2x9g_A 84 TNSNV--LPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQR 161 (288)
T ss_dssp SCSTT--HHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CCccC--CHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 98210 0125555554 6899999999642 12346678999999999999887652
Q ss_pred -C--C------CceEEEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHH
Q psy6053 236 -K--H------LELFVHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEG 306 (614)
Q Consensus 236 -~--~------~k~~V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~ 306 (614)
. + ..++|++||..+.... | ....|+.||+..+.
T Consensus 162 ~~~~~~~~~~~~g~iv~isS~~~~~~~----------~----------------------------~~~~Y~asKaa~~~ 203 (288)
T 2x9g_A 162 QKGTNPNCTSSNLSIVNLCDAMVDQPC----------M----------------------------AFSLYNMGKHALVG 203 (288)
T ss_dssp C--------CCCEEEEEECCTTTTSCC----------T----------------------------TCHHHHHHHHHHHH
T ss_pred HhhcCCCCCCCCeEEEEEecccccCCC----------C----------------------------CCchHHHHHHHHHH
Confidence 1 1 4589999998654321 0 01579999998887
Q ss_pred HHHHHhh----CCCCEEEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccc-eeHHHHHHHHHH
Q psy6053 307 LVVEAMN----NGMPCLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADF-LPVDITINGIFV 381 (614)
Q Consensus 307 lv~~~~~----~glp~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~-vpVDdva~aii~ 381 (614)
+.+..+. .|+++++++||.|.++. . + .+. ......... + ...+ ...+|+|++++.
T Consensus 204 l~~~la~e~~~~gI~vn~v~PG~v~t~~-~----~-----~~~-~~~~~~~~~-------p--~~r~~~~pedvA~~v~~ 263 (288)
T 2x9g_A 204 LTQSAALELAPYGIRVNGVAPGVSLLPV-A----M-----GEE-EKDKWRRKV-------P--LGRREASAEQIADAVIF 263 (288)
T ss_dssp HHHHHHHHHGGGTEEEEEEEESSCSCCT-T----S-----CHH-HHHHHHHTC-------T--TTSSCCCHHHHHHHHHH
T ss_pred HHHHHHHHhhccCeEEEEEEeccccCcc-c----c-----ChH-HHHHHHhhC-------C--CCCCCCCHHHHHHHHHH
Confidence 7766544 58999999999997764 1 0 111 111111111 0 0123 678999999999
Q ss_pred HHHhhhhcCCCCccEEEeccC
Q psy6053 382 AIWAYLSQKEHRQSIVHLTSS 402 (614)
Q Consensus 382 ~~~~~~~~~~~~~~vyni~~~ 402 (614)
++..... -..+.++++.++
T Consensus 264 l~s~~~~--~itG~~i~vdGG 282 (288)
T 2x9g_A 264 LVSGSAQ--YITGSIIKVDGG 282 (288)
T ss_dssp HHSGGGT--TCCSCEEEESTT
T ss_pred HhCcccc--CccCCEEEECcc
Confidence 8865332 236778888776
No 265
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=99.65 E-value=1.3e-15 Score=153.69 Aligned_cols=206 Identities=14% Similarity=0.153 Sum_probs=138.6
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
+++|+++||||+|+||++++++|++.|.+ |+++.|+. +++++..+ .++ . ...++.++.+|+
T Consensus 2 l~~k~~lVTGas~GIG~aia~~la~~G~~---V~~~~r~~------~~~~~~~~-----~l~----~-~~~~~~~~~~Dv 62 (264)
T 3tfo_A 2 VMDKVILITGASGGIGEGIARELGVAGAK---ILLGARRQ------ARIEAIAT-----EIR----D-AGGTALAQVLDV 62 (264)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCE---EEEEESSH------HHHHHHHH-----HHH----H-TTCEEEEEECCT
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHCCCE---EEEEECCH------HHHHHHHH-----HHH----h-cCCcEEEEEcCC
Confidence 35789999999999999999999999876 88888863 22222211 111 1 335788999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHHc---CCCceEE
Q psy6053 180 EADELAIKESDRQLLAS-------EVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKEM---KHLELFV 242 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~V 242 (614)
++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+..+++.+... .+..++|
T Consensus 63 ~d~~------~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV 136 (264)
T 3tfo_A 63 TDRH------SVAAFAQAAVDTWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQII 136 (264)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEE
Confidence 9876 6666654 68999999997532 3567788999999999888876531 2457899
Q ss_pred EEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh--CCCCEEE
Q psy6053 243 HISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN--NGMPCLM 320 (614)
Q Consensus 243 ~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~--~glp~~I 320 (614)
++||..+..... ....|+.||+..+.+.+..+. .|+++..
T Consensus 137 ~isS~~~~~~~~--------------------------------------~~~~Y~asKaal~~l~~~la~e~~gIrvn~ 178 (264)
T 3tfo_A 137 NIGSIGALSVVP--------------------------------------TAAVYCATKFAVRAISDGLRQESTNIRVTC 178 (264)
T ss_dssp EECCGGGTCCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHCSSEEEEE
T ss_pred EEcCHHHcccCC--------------------------------------CChhHHHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 999987643210 014799999999998887665 4899999
Q ss_pred eecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhh
Q psy6053 321 LRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYL 387 (614)
Q Consensus 321 vRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~ 387 (614)
++||.|..+..... .... ..... ..........+|+|++++.++..+.
T Consensus 179 v~PG~v~T~~~~~~-------~~~~------~~~~~------~~~~~~~~~pedvA~~v~~l~s~~~ 226 (264)
T 3tfo_A 179 VNPGVVESELAGTI-------THEE------TMAAM------DTYRAIALQPADIARAVRQVIEAPQ 226 (264)
T ss_dssp EEECCC------------------------------------------CCCHHHHHHHHHHHHHSCT
T ss_pred EecCCCcCcccccc-------cchh------HHHHH------HhhhccCCCHHHHHHHHHHHhcCCc
Confidence 99998865432110 0000 00000 0001113679999999999987654
No 266
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=99.65 E-value=1.1e-15 Score=155.54 Aligned_cols=207 Identities=13% Similarity=0.129 Sum_probs=137.8
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
++||++|||||+|+||++++++|++.|.+ |+++.|+.. ++++..+ .+... ....+.++.+|+
T Consensus 31 l~gk~~lVTGas~GIG~aia~~la~~G~~---V~~~~r~~~------~~~~~~~-----~~~~~----~~~~~~~~~~Dv 92 (281)
T 4dry_A 31 GEGRIALVTGGGTGVGRGIAQALSAEGYS---VVITGRRPD------VLDAAAG-----EIGGR----TGNIVRAVVCDV 92 (281)
T ss_dssp ---CEEEETTTTSHHHHHHHHHHHHTTCE---EEEEESCHH------HHHHHHH-----HHHHH----HSSCEEEEECCT
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEECCHH------HHHHHHH-----HHHhc----CCCeEEEEEcCC
Confidence 57899999999999999999999999875 888888642 2222111 11111 123468999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcccccCh--------hHHHHHHHHHhHHHHHHHHHHHHHc---CC--Cc
Q psy6053 180 EADELAIKESDRQLLAS-------EVDIMIHGAATIRF--------DEALKKAVLLNTRGTKMMLSLAKEM---KH--LE 239 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~--------~~~~~~~~~~Nv~gt~~ll~la~~~---~~--~k 239 (614)
++++ +++.+++ .+|++||+||.... .+.++..+++|+.|+.++.+.+... .+ -.
T Consensus 93 ~d~~------~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g 166 (281)
T 4dry_A 93 GDPD------QVAALFAAVRAEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGG 166 (281)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCc
Confidence 9876 6666654 57999999996421 3567789999999988888776542 11 46
Q ss_pred eEEEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CC
Q psy6053 240 LFVHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NG 315 (614)
Q Consensus 240 ~~V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~g 315 (614)
++|++||..+..... ....|+.||+..+.+.+..+. +|
T Consensus 167 ~IV~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~l~~~la~e~~~~g 208 (281)
T 4dry_A 167 RIINNGSISAQTPRP--------------------------------------NSAPYTATKHAITGLTKSTALDGRMHD 208 (281)
T ss_dssp EEEEECCGGGTCCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGT
T ss_pred EEEEECCHHhCCCCC--------------------------------------CChhHHHHHHHHHHHHHHHHHHhcccC
Confidence 899999986532210 015799999999988877654 58
Q ss_pred CCEEEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhh
Q psy6053 316 MPCLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYL 387 (614)
Q Consensus 316 lp~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~ 387 (614)
+.+..++||.|..+..... ..+.... ........+.+.+|+|++++.++..+.
T Consensus 209 I~vn~v~PG~v~T~~~~~~-----------------~~~~~~~--~~~~~~~~~~~pedvA~~v~fL~s~~~ 261 (281)
T 4dry_A 209 IACGQIDIGNAATDMTARM-----------------STGVLQA--NGEVAAEPTIPIEHIAEAVVYMASLPL 261 (281)
T ss_dssp EEEEEEEEECBCC------------------------CEEECT--TSCEEECCCBCHHHHHHHHHHHHHSCT
T ss_pred eEEEEEEECcCcChhhhhh-----------------cchhhhh--hhcccccCCCCHHHHHHHHHHHhCCCc
Confidence 9999999998865432110 0000000 000111236789999999999997654
No 267
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=99.65 E-value=9.7e-16 Score=152.95 Aligned_cols=207 Identities=16% Similarity=0.145 Sum_probs=141.9
Q ss_pred ccCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCC
Q psy6053 99 TFTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGD 178 (614)
Q Consensus 99 ~~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gD 178 (614)
.+++|+++||||||+||++++++|++.|++ |+++.|+. ++++++.+ .++. ...++.++.+|
T Consensus 4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~---V~~~~r~~------~~~~~~~~-----~l~~-----~~~~~~~~~~D 64 (247)
T 2jah_A 4 ALQGKVALITGASSGIGEATARALAAEGAA---VAIAARRV------EKLRALGD-----ELTA-----AGAKVHVLELD 64 (247)
T ss_dssp TTTTCEEEEESCSSHHHHHHHHHHHHTTCE---EEEEESCH------HHHHHHHH-----HHHH-----TTCCEEEEECC
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEECCH------HHHHHHHH-----HHHh-----cCCcEEEEECC
Confidence 357899999999999999999999999876 88888863 22222211 1111 22468899999
Q ss_pred CCCCCCCCCHHHHHHHhc-------cccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHHc---CCCceE
Q psy6053 179 AEADELAIKESDRQLLAS-------EVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKEM---KHLELF 241 (614)
Q Consensus 179 l~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~ 241 (614)
+++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++.+... .+ .++
T Consensus 65 v~~~~------~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~i 137 (247)
T 2jah_A 65 VADRQ------GVDAAVASTVEALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTV 137 (247)
T ss_dssp TTCHH------HHHHHHHHHHHHHSCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEE
T ss_pred CCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEE
Confidence 99865 6666554 68999999996431 3567788999999999999887642 23 699
Q ss_pred EEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCC
Q psy6053 242 VHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMP 317 (614)
Q Consensus 242 V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp 317 (614)
|++||..+.... | ....|+.||+..+.+.+.... .|++
T Consensus 138 v~isS~~~~~~~----------~----------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~ 179 (247)
T 2jah_A 138 VQMSSIAGRVNV----------R----------------------------NAAVYQATKFGVNAFSETLRQEVTERGVR 179 (247)
T ss_dssp EEECCGGGTCCC----------T----------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCE
T ss_pred EEEccHHhcCCC----------C----------------------------CCcHHHHHHHHHHHHHHHHHHHhcccCcE
Confidence 999998654321 0 015799999988877766543 5999
Q ss_pred EEEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhh
Q psy6053 318 CLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAY 386 (614)
Q Consensus 318 ~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~ 386 (614)
+++++||.|..+... ..... . ....... .+ ....+...+|+|++++.++...
T Consensus 180 v~~v~PG~v~T~~~~-------~~~~~-~-~~~~~~~----~~----~~~~~~~pedvA~~v~~l~s~~ 231 (247)
T 2jah_A 180 VVVIEPGTTDTELRG-------HITHT-A-TKEMYEQ----RI----SQIRKLQAQDIAEAVRYAVTAP 231 (247)
T ss_dssp EEEEEECSBSSSGGG-------GCCCH-H-HHHHHHH----HT----TTSCCBCHHHHHHHHHHHHHSC
T ss_pred EEEEECCCCCCcchh-------cccch-h-hHHHHHh----cc----cccCCCCHHHHHHHHHHHhCCC
Confidence 999999998664321 11111 1 1111110 01 1111478999999999988654
No 268
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=99.65 E-value=1.1e-15 Score=154.07 Aligned_cols=224 Identities=14% Similarity=0.049 Sum_probs=153.5
Q ss_pred cCCcEEEEeccc--ccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeC
Q psy6053 100 FTGKTLFMTGAS--GFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISG 177 (614)
Q Consensus 100 ~~~~~VLITGaT--GFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~g 177 (614)
+++|+|+||||+ |+||.+++++|++.|.+ |+++.|..... ..+.++++.+ . ...++.++.+
T Consensus 18 l~~k~vlITGas~~~giG~~~a~~l~~~G~~---v~~~~~~~~~~-~~~~~~~l~~---------~----~~~~~~~~~~ 80 (267)
T 3gdg_A 18 LKGKVVVVTGASGPKGMGIEAARGCAEMGAA---VAITYASRAQG-AEENVKELEK---------T----YGIKAKAYKC 80 (267)
T ss_dssp CTTCEEEETTCCSSSSHHHHHHHHHHHTSCE---EEECBSSSSSH-HHHHHHHHHH---------H----HCCCEECCBC
T ss_pred cCCCEEEEECCCCCCChHHHHHHHHHHCCCe---EEEEeCCcchh-HHHHHHHHHH---------h----cCCceeEEec
Confidence 578999999999 89999999999999876 77888775432 1233333211 1 2357899999
Q ss_pred CCCCCCCCCCHHHHHHHhc-------cccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHHc---CCCce
Q psy6053 178 DAEADELAIKESDRQLLAS-------EVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKEM---KHLEL 240 (614)
Q Consensus 178 Dl~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~ 240 (614)
|+++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++.+... .+..+
T Consensus 81 Dl~~~~------~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~ 154 (267)
T 3gdg_A 81 QVDSYE------SCEKLVKDVVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGS 154 (267)
T ss_dssp CTTCHH------HHHHHHHHHHHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCE
T ss_pred CCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCce
Confidence 999866 6666654 56999999996532 3567788999999999999888321 24568
Q ss_pred EEEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh---CCCC
Q psy6053 241 FVHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN---NGMP 317 (614)
Q Consensus 241 ~V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~---~glp 317 (614)
+|++||..+..... +++ ...|+.||+..+.+++..+. ..+.
T Consensus 155 iv~isS~~~~~~~~-------~~~-----------------------------~~~Y~~sK~a~~~~~~~la~e~~~~i~ 198 (267)
T 3gdg_A 155 LVITASMSGHIANF-------PQE-----------------------------QTSYNVAKAGCIHMARSLANEWRDFAR 198 (267)
T ss_dssp EEEECCGGGTSCCS-------SSC-----------------------------CHHHHHHHHHHHHHHHHHHHHTTTTCE
T ss_pred EEEEccccccccCC-------CCC-----------------------------CCcchHHHHHHHHHHHHHHHHhccCcE
Confidence 99999986532210 000 15799999999999887765 2378
Q ss_pred EEEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEE
Q psy6053 318 CLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIV 397 (614)
Q Consensus 318 ~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vy 397 (614)
+..+.||.|-.+... .. +......... ......+..++|+|++++.++..... -..+.++
T Consensus 199 v~~v~PG~v~t~~~~-------~~--~~~~~~~~~~---------~~~~~r~~~~~dva~~~~~l~s~~~~--~itG~~i 258 (267)
T 3gdg_A 199 VNSISPGYIDTGLSD-------FV--PKETQQLWHS---------MIPMGRDGLAKELKGAYVYFASDAST--YTTGADL 258 (267)
T ss_dssp EEEEEECCEECSCGG-------GS--CHHHHHHHHT---------TSTTSSCEETHHHHHHHHHHHSTTCT--TCCSCEE
T ss_pred EEEEECCccccchhh-------hC--CHHHHHHHHh---------cCCCCCCcCHHHHHhHhheeecCccc--cccCCEE
Confidence 999999988654321 11 1111111111 11223466789999999988864321 1368899
Q ss_pred EeccC
Q psy6053 398 HLTSS 402 (614)
Q Consensus 398 ni~~~ 402 (614)
++.+|
T Consensus 259 ~vdgG 263 (267)
T 3gdg_A 259 LIDGG 263 (267)
T ss_dssp EESTT
T ss_pred EECCc
Confidence 99877
No 269
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=99.64 E-value=2.5e-15 Score=153.33 Aligned_cols=214 Identities=15% Similarity=0.196 Sum_probs=147.6
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCc-----CHHHHHHHHHhChhhHHhhhhccccccCeEEE
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGK-----NARQRIEELFASPLFNLLKSVHGQKIIDKVLP 174 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~-----~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~ 174 (614)
+++|+++||||+|+||++++++|++.|.+ |+++.|+.... ..++..+++ . . ...++.+
T Consensus 7 l~~k~vlVTGas~GIG~aia~~l~~~G~~---V~~~~r~~~~~~~~~~~~~~~~~~~---------~----~-~~~~~~~ 69 (285)
T 3sc4_A 7 LRGKTMFISGGSRGIGLAIAKRVAADGAN---VALVAKSAEPHPKLPGTIYTAAKEI---------E----E-AGGQALP 69 (285)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHTTTCE---EEEEESCCSCCSSSCCCHHHHHHHH---------H----H-HTSEEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEECChhhhhhhhHHHHHHHHHH---------H----h-cCCcEEE
Confidence 57899999999999999999999999875 89999986531 111111111 1 1 3357999
Q ss_pred EeCCCCCCCCCCCHHHHHHHhc-------cccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHHc---CC
Q psy6053 175 ISGDAEADELAIKESDRQLLAS-------EVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKEM---KH 237 (614)
Q Consensus 175 v~gDl~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~ 237 (614)
+.+|+++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++.+... .+
T Consensus 70 ~~~Dv~~~~------~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~ 143 (285)
T 3sc4_A 70 IVGDIRDGD------AVAAAVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRD 143 (285)
T ss_dssp EECCTTSHH------HHHHHHHHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSS
T ss_pred EECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC
Confidence 999999976 6666665 78999999997532 3567788999999999999988763 13
Q ss_pred CceEEEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----
Q psy6053 238 LELFVHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN---- 313 (614)
Q Consensus 238 ~k~~V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~---- 313 (614)
..++|++||..+..... .....|+.||+..+.+.+..+.
T Consensus 144 ~g~iv~isS~~~~~~~~-------------------------------------~~~~~Y~asKaal~~~~~~la~e~~~ 186 (285)
T 3sc4_A 144 NPHILTLSPPIRLEPKW-------------------------------------LRPTPYMMAKYGMTLCALGIAEELRD 186 (285)
T ss_dssp SCEEEECCCCCCCSGGG-------------------------------------SCSHHHHHHHHHHHHHHHHHHHHTGG
T ss_pred CcEEEEECChhhccCCC-------------------------------------CCCchHHHHHHHHHHHHHHHHHHhcc
Confidence 46899999986532210 0015799999999988877654
Q ss_pred CCCCEEEeecc-eeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCC
Q psy6053 314 NGMPCLMLRPS-IIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEH 392 (614)
Q Consensus 314 ~glp~~IvRp~-~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~ 392 (614)
+|+.+..++|| .+..+ +....... ......+...+|+|++++.++..... .
T Consensus 187 ~gI~vn~v~PG~~v~t~-----------------~~~~~~~~--------~~~~~r~~~pedvA~~~~~l~s~~~~---~ 238 (285)
T 3sc4_A 187 AGIASNTLWPRTTVATA-----------------AVQNLLGG--------DEAMARSRKPEVYADAAYVVLNKPSS---Y 238 (285)
T ss_dssp GTCEEEEEECSSCBCCH-----------------HHHHHHTS--------CCCCTTCBCTHHHHHHHHHHHTSCTT---C
T ss_pred cCcEEEEEeCCCccccH-----------------HHHhhccc--------cccccCCCCHHHHHHHHHHHhCCccc---c
Confidence 58999999998 34211 11111111 11122356789999999988865431 2
Q ss_pred CccEEEecc
Q psy6053 393 RQSIVHLTS 401 (614)
Q Consensus 393 ~~~vyni~~ 401 (614)
.++++.+.+
T Consensus 239 tG~~i~~dg 247 (285)
T 3sc4_A 239 TGNTLLCED 247 (285)
T ss_dssp CSCEEEHHH
T ss_pred cceEEEEcC
Confidence 455554443
No 270
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=99.64 E-value=5.2e-15 Score=152.10 Aligned_cols=205 Identities=16% Similarity=0.164 Sum_probs=126.6
Q ss_pred ccCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCC
Q psy6053 99 TFTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGD 178 (614)
Q Consensus 99 ~~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gD 178 (614)
..++|+|+||||||+||.+++++|++.|.+ |++..|+... ..+.++++ +.. ...++.++.+|
T Consensus 9 ~~~~k~vlITGas~GIG~~~a~~L~~~G~~---V~~~~r~~~~--~~~~~~~l---------~~~----~~~~~~~~~~D 70 (311)
T 3o26_A 9 VTKRRCAVVTGGNKGIGFEICKQLSSNGIM---VVLTCRDVTK--GHEAVEKL---------KNS----NHENVVFHQLD 70 (311)
T ss_dssp ---CCEEEESSCSSHHHHHHHHHHHHTTCE---EEEEESCHHH--HHHHHHHH---------HTT----TCCSEEEEECC
T ss_pred cCCCcEEEEecCCchHHHHHHHHHHHCCCE---EEEEeCCHHH--HHHHHHHH---------Hhc----CCCceEEEEcc
Confidence 356899999999999999999999999875 8999997422 11112222 111 22479999999
Q ss_pred CCCC-CCCCCHHHHHHHhc-------cccEEEEcccccCh-------------------------------------hHH
Q psy6053 179 AEAD-ELAIKESDRQLLAS-------EVDIMIHGAATIRF-------------------------------------DEA 213 (614)
Q Consensus 179 l~~~-~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~-------------------------------------~~~ 213 (614)
++++ + .++.+++ ++|++||+||.... .+.
T Consensus 71 l~~~~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (311)
T 3o26_A 71 VTDPIA------TMSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYEL 144 (311)
T ss_dssp TTSCHH------HHHHHHHHHHHHHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHH
T ss_pred CCCcHH------HHHHHHHHHHHhCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhh
Confidence 9997 4 4444443 79999999997531 234
Q ss_pred HHHHHHHhHHHHHHHHHHHHHc---CCCceEEEEeCceeccCCc---ccccccC-CCCCChhHHHHHHhhcchhHHhhhh
Q psy6053 214 LKKAVLLNTRGTKMMLSLAKEM---KHLELFVHISTAYCHLQEK---VLYEKPY-PPPTDPHKLIERVEMMSEDTVEKRA 286 (614)
Q Consensus 214 ~~~~~~~Nv~gt~~ll~la~~~---~~~k~~V~vST~~~~~~~~---~i~E~~~-~~p~~~~~~~~~~~~~~~~~l~~~~ 286 (614)
++..+++|+.|+.++++.+... .+..++|++||..+..... ...+... +......++-...+...++..+.
T Consensus 145 ~~~~~~~N~~g~~~l~~~~~~~l~~~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 222 (311)
T 3o26_A 145 AEECLKINYNGVKSVTEVLIPLLQLSDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKEN-- 222 (311)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTT--
T ss_pred hhhheeeeeehHHHHHHHhhHhhccCCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhcc--
Confidence 5667999999999988887542 2456999999986533210 0000000 00111111111111110110000
Q ss_pred hhhcCCCC---CchhhhHHHHHHHHHHHhh--CCCCEEEeecceeecc
Q psy6053 287 KEFLGEFP---NSYAYTKCLSEGLVVEAMN--NGMPCLMLRPSIIIPV 329 (614)
Q Consensus 287 p~~~~~~p---n~Y~~SK~~aE~lv~~~~~--~glp~~IvRp~~I~g~ 329 (614)
..-..++| ..|+.||+..+.+.+..+. .++.+..+.||.|..+
T Consensus 223 ~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~e~~~i~v~~v~PG~v~T~ 270 (311)
T 3o26_A 223 LIETNGWPSFGAAYTTSKACLNAYTRVLANKIPKFQVNCVCPGLVKTE 270 (311)
T ss_dssp CTTTTTCCSSCHHHHHHHHHHHHHHHHHHHHCTTSEEEEECCCSBCSG
T ss_pred ccccccCcccchhhHHHHHHHHHHHHHHHhhcCCceEEEecCCceecC
Confidence 00112232 4699999999999988877 4788999999987543
No 271
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2
Probab=99.64 E-value=3.1e-15 Score=155.75 Aligned_cols=225 Identities=13% Similarity=0.065 Sum_probs=150.5
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEE-ccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILM-RQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGD 178 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~Lv-R~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gD 178 (614)
+++|+||||||+|+||+++++.|++.|.+ |+++. |+. ++++++.+ .+... ...++.++.+|
T Consensus 44 l~~k~~lVTGas~GIG~aia~~La~~G~~---Vv~~~~r~~------~~~~~~~~-----~l~~~----~~~~~~~~~~D 105 (328)
T 2qhx_A 44 PTVPVALVTGAAKRLGRSIAEGLHAEGYA---VCLHYHRSA------AEANALSA-----TLNAR----RPNSAITVQAD 105 (328)
T ss_dssp -CCCEEEETTCSSHHHHHHHHHHHHTTCE---EEEEESSCH------HHHHHHHH-----HHHHH----STTCEEEEECC
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEcCCCH------HHHHHHHH-----HHHhh----cCCeEEEEEee
Confidence 57899999999999999999999999876 88888 753 22222211 11101 22478999999
Q ss_pred CCCCCCCCC------------HHHHHHHhc-------cccEEEEcccccCh---------------------hHHHHHHH
Q psy6053 179 AEADELAIK------------ESDRQLLAS-------EVDIMIHGAATIRF---------------------DEALKKAV 218 (614)
Q Consensus 179 l~~~~lGLs------------~~~~~~l~~-------~vd~ViH~AA~v~~---------------------~~~~~~~~ 218 (614)
+++++ ++. .++++.+++ .+|++||+||.... .+.++..+
T Consensus 106 l~d~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~ 184 (328)
T 2qhx_A 106 LSNVA-TAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLF 184 (328)
T ss_dssp CSSSC-BCC-------CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHH
T ss_pred CCCch-hccccccccccccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHH
Confidence 99865 000 013444443 78999999996431 45567789
Q ss_pred HHhHHHHHHHHHHHHHc---CC------CceEEEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhh
Q psy6053 219 LLNTRGTKMMLSLAKEM---KH------LELFVHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEF 289 (614)
Q Consensus 219 ~~Nv~gt~~ll~la~~~---~~------~k~~V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~ 289 (614)
++|+.|+.++++++... .+ ..++|++||..+.... |
T Consensus 185 ~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~IV~isS~~~~~~~----------~------------------------- 229 (328)
T 2qhx_A 185 GSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPL----------L------------------------- 229 (328)
T ss_dssp HHHTHHHHHHHHHHHHHHHHSCGGGSCSCEEEEEECCTTTTSCC----------T-------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCcCCCCCcEEEEECchhhccCC----------C-------------------------
Confidence 99999999999887642 23 5789999998654221 0
Q ss_pred cCCCCCchhhhHHHHHHHHHHHhh----CCCCEEEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCc
Q psy6053 290 LGEFPNSYAYTKCLSEGLVVEAMN----NGMPCLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTG 365 (614)
Q Consensus 290 ~~~~pn~Y~~SK~~aE~lv~~~~~----~glp~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~ 365 (614)
....|+.||+..+.+.+..+. .|+.+++++||.|..+. . .. + .......... +. +
T Consensus 230 ---~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~-~-------~~--~-~~~~~~~~~~----p~-~-- 288 (328)
T 2qhx_A 230 ---GYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-D-------MP--P-AVWEGHRSKV----PL-Y-- 288 (328)
T ss_dssp ---TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCC-C-------SC--H-HHHHHHHTTC----TT-T--
T ss_pred ---CcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCCc-c-------cc--H-HHHHHHHhhC----CC-C--
Confidence 015799999999988877654 58999999999987653 1 11 1 1222222111 00 0
Q ss_pred cccceeHHHHHHHHHHHHHhhhhcCCCCccEEEeccC
Q psy6053 366 YADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLTSS 402 (614)
Q Consensus 366 ~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~~~ 402 (614)
.-+...+|+|++++.++..... ...+.++++.++
T Consensus 289 -~r~~~pedvA~~v~~l~s~~~~--~itG~~i~vdGG 322 (328)
T 2qhx_A 289 -QRDSSAAEVSDVVIFLCSSKAK--YITGTCVKVDGG 322 (328)
T ss_dssp -TSCBCHHHHHHHHHHHHSGGGT--TCCSCEEEESTT
T ss_pred -CCCCCHHHHHHHHHHHhCcccc--CccCcEEEECCC
Confidence 0356789999999998864331 136788988776
No 272
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=99.63 E-value=3.8e-15 Score=148.26 Aligned_cols=212 Identities=15% Similarity=0.149 Sum_probs=142.2
Q ss_pred cccCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeC
Q psy6053 98 ETFTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISG 177 (614)
Q Consensus 98 ~~~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~g 177 (614)
+.+++|+|+||||+|+||++++++|++.|++ |+++.|+.. ++++..+ .++.. ...++.++.+
T Consensus 10 ~~l~~k~vlITGas~gIG~~ia~~l~~~G~~---V~~~~r~~~------~~~~~~~-----~~~~~----~~~~~~~~~~ 71 (247)
T 3i1j_A 10 ELLKGRVILVTGAARGIGAAAARAYAAHGAS---VVLLGRTEA------SLAEVSD-----QIKSA----GQPQPLIIAL 71 (247)
T ss_dssp TTTTTCEEEESSTTSHHHHHHHHHHHHTTCE---EEEEESCHH------HHHHHHH-----HHHHT----TSCCCEEEEC
T ss_pred ccCCCCEEEEeCCCChHHHHHHHHHHHCCCE---EEEEecCHH------HHHHHHH-----HHHhc----CCCCceEEEe
Confidence 3467999999999999999999999999875 888888642 2222111 11111 2245677777
Q ss_pred CC--CCCCCCCCHHHHHHHhc-------cccEEEEcccccC----h----hHHHHHHHHHhHHHHHHHHHHHHHc---CC
Q psy6053 178 DA--EADELAIKESDRQLLAS-------EVDIMIHGAATIR----F----DEALKKAVLLNTRGTKMMLSLAKEM---KH 237 (614)
Q Consensus 178 Dl--~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~----~----~~~~~~~~~~Nv~gt~~ll~la~~~---~~ 237 (614)
|+ ++++ +++.+++ ++|++||+||... + .+.++..+++|+.|+.++++.+... .+
T Consensus 72 d~d~~~~~------~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~ 145 (247)
T 3i1j_A 72 NLENATAQ------QYRELAARVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSE 145 (247)
T ss_dssp CTTTCCHH------HHHHHHHHHHHHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS
T ss_pred ccccCCHH------HHHHHHHHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC
Confidence 77 5543 5555544 6899999999742 1 3567788999999999999988431 34
Q ss_pred CceEEEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----
Q psy6053 238 LELFVHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN---- 313 (614)
Q Consensus 238 ~k~~V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~---- 313 (614)
..++|++||..+..... ....|+.||+..|.+.+..+.
T Consensus 146 ~~~iv~isS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~~~la~e~~~ 187 (247)
T 3i1j_A 146 DASIAFTSSSVGRKGRA--------------------------------------NWGAYGVSKFATEGLMQTLADELEG 187 (247)
T ss_dssp SEEEEEECCGGGTSCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCeEEEEcchhhcCCCC--------------------------------------CcchhHHHHHHHHHHHHHHHHHhcC
Confidence 57899999986532210 015799999999988876543
Q ss_pred -CCCCEEEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCC
Q psy6053 314 -NGMPCLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEH 392 (614)
Q Consensus 314 -~glp~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~ 392 (614)
.++.+..++||.|-.+ +...... ......+...+|+|++++.++..... -.
T Consensus 188 ~~~i~v~~v~PG~v~t~-----------------~~~~~~~---------~~~~~~~~~p~dva~~~~~l~s~~~~--~i 239 (247)
T 3i1j_A 188 VTAVRANSINPGATRTG-----------------MRAQAYP---------DENPLNNPAPEDIMPVYLYLMGPDST--GI 239 (247)
T ss_dssp TSSEEEEEEECCCCSSH-----------------HHHHHST---------TSCGGGSCCGGGGTHHHHHHHSGGGT--TC
T ss_pred CCCeEEEEEecCcccCc-----------------cchhccc---------ccCccCCCCHHHHHHHHHHHhCchhc--cc
Confidence 4788999999877432 1111111 11223456789999999988865432 12
Q ss_pred CccEEEe
Q psy6053 393 RQSIVHL 399 (614)
Q Consensus 393 ~~~vyni 399 (614)
.++++++
T Consensus 240 tG~~i~~ 246 (247)
T 3i1j_A 240 NGQALNA 246 (247)
T ss_dssp CSCEEEC
T ss_pred cCeeecC
Confidence 4555543
No 273
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=99.63 E-value=2.2e-15 Score=151.66 Aligned_cols=167 Identities=16% Similarity=0.197 Sum_probs=122.5
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
+++|+++||||||+||++++++|++.|++ |+++.|+. +++++..+ .++ . ...++.++.+|+
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~---V~~~~r~~------~~~~~~~~-----~~~----~-~~~~~~~~~~D~ 65 (262)
T 1zem_A 5 FNGKVCLVTGAGGNIGLATALRLAEEGTA---IALLDMNR------EALEKAEA-----SVR----E-KGVEARSYVCDV 65 (262)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCH------HHHHHHHH-----HHH----T-TTSCEEEEECCT
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEeCCH------HHHHHHHH-----HHH----h-cCCcEEEEEecC
Confidence 56899999999999999999999999876 88888863 22222111 111 1 224688999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEccccc-C---h----hHHHHHHHHHhHHHHHHHHHHHHHc---CCCceE
Q psy6053 180 EADELAIKESDRQLLAS-------EVDIMIHGAATI-R---F----DEALKKAVLLNTRGTKMMLSLAKEM---KHLELF 241 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v-~---~----~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~ 241 (614)
++++ +++.+++ ++|++||+||.. . + .+.++..+++|+.|+.++++.+... .+..++
T Consensus 66 ~~~~------~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~i 139 (262)
T 1zem_A 66 TSEE------AVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRI 139 (262)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEE
T ss_pred CCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEE
Confidence 9865 6665554 689999999865 2 1 3557788999999999999887652 245799
Q ss_pred EEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCC
Q psy6053 242 VHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMP 317 (614)
Q Consensus 242 V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp 317 (614)
|++||..+.... | ....|+.||+..+.+.+.... .|++
T Consensus 140 v~isS~~~~~~~----------~----------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~ 181 (262)
T 1zem_A 140 VNTASMAGVKGP----------P----------------------------NMAAYGTSKGAIIALTETAALDLAPYNIR 181 (262)
T ss_dssp EEECCHHHHSCC----------T----------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred EEEcchhhccCC----------C----------------------------CCchHHHHHHHHHHHHHHHHHHHHhhCeE
Confidence 999998653221 0 014799999888777766543 5899
Q ss_pred EEEeecceeecc
Q psy6053 318 CLMLRPSIIIPV 329 (614)
Q Consensus 318 ~~IvRp~~I~g~ 329 (614)
+.+++||.|..+
T Consensus 182 vn~v~PG~v~t~ 193 (262)
T 1zem_A 182 VNAISPGYMGPG 193 (262)
T ss_dssp EEEEEECSBCSS
T ss_pred EEEEecCCcCcc
Confidence 999999987543
No 274
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=99.63 E-value=1.7e-15 Score=151.42 Aligned_cols=202 Identities=16% Similarity=0.147 Sum_probs=138.6
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
.++|+++||||+|+||++++++|++.|.+ |+++.|+.. ++++..+ .+....+ ...++.++.+|+
T Consensus 5 ~~~k~~lVTGas~GIG~aia~~l~~~G~~---V~~~~r~~~------~~~~~~~-----~~~~~~~--~~~~~~~~~~Dv 68 (250)
T 3nyw_A 5 KQKGLAIITGASQGIGAVIAAGLATDGYR---VVLIARSKQ------NLEKVHD-----EIMRSNK--HVQEPIVLPLDI 68 (250)
T ss_dssp CCCCEEEEESTTSHHHHHHHHHHHHHTCE---EEEEESCHH------HHHHHHH-----HHHHHCT--TSCCCEEEECCT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEECCHH------HHHHHHH-----HHHHhcc--ccCcceEEeccC
Confidence 46899999999999999999999999875 888888642 2222111 1111111 115788999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcccccCh------hHHHHHHHHHhHHHHHHHHHHHHHc---CCCceEEE
Q psy6053 180 EADELAIKESDRQLLAS-------EVDIMIHGAATIRF------DEALKKAVLLNTRGTKMMLSLAKEM---KHLELFVH 243 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~V~ 243 (614)
++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++.+... .+..++|+
T Consensus 69 ~~~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~ 142 (250)
T 3nyw_A 69 TDCT------KADTEIKDIHQKYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFN 142 (250)
T ss_dssp TCHH------HHHHHHHHHHHHHCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred CCHH------HHHHHHHHHHHhcCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEE
Confidence 9865 6666554 68999999997432 3557788999999999999887431 24578999
Q ss_pred EeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCCEE
Q psy6053 244 ISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMPCL 319 (614)
Q Consensus 244 vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp~~ 319 (614)
+||..+..... + ...|+.||+..+.+.+..+. .|+++.
T Consensus 143 isS~~~~~~~~---------~-----------------------------~~~Y~asKaa~~~l~~~la~e~~~~gi~vn 184 (250)
T 3nyw_A 143 VASRAAKYGFA---------D-----------------------------GGIYGSTKFALLGLAESLYRELAPLGIRVT 184 (250)
T ss_dssp ECC-------C---------C-----------------------------TTHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred EccHHhcCCCC---------C-----------------------------CcchHHHHHHHHHHHHHHHHHhhhcCcEEE
Confidence 99986532110 0 15799999998888876654 589999
Q ss_pred EeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhh
Q psy6053 320 MLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYL 387 (614)
Q Consensus 320 IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~ 387 (614)
.++||.|..+. ...... ......+++.+|+|++++.++..+.
T Consensus 185 ~v~PG~v~T~~-----------------~~~~~~---------~~~~~~~~~p~dva~~v~~l~s~~~ 226 (250)
T 3nyw_A 185 TLCPGWVNTDM-----------------AKKAGT---------PFKDEEMIQPDDLLNTIRCLLNLSE 226 (250)
T ss_dssp EEEESSBCSHH-----------------HHHTTC---------CSCGGGSBCHHHHHHHHHHHHTSCT
T ss_pred EEecCcccCch-----------------hhhcCC---------CcccccCCCHHHHHHHHHHHHcCCC
Confidence 99999874431 111110 1122347899999999999886543
No 275
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=99.62 E-value=5.5e-15 Score=150.42 Aligned_cols=227 Identities=15% Similarity=0.124 Sum_probs=149.2
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
+++|+++||||+|+||++++++|++.|.+ |+++.|.. ++++++.. + ...++.++.+|+
T Consensus 3 l~gk~~lVTGas~GIG~aia~~la~~G~~---V~~~~r~~------~~~~~~~~---------~----~~~~~~~~~~Dv 60 (281)
T 3zv4_A 3 LTGEVALITGGASGLGRALVDRFVAEGAR---VAVLDKSA------ERLRELEV---------A----HGGNAVGVVGDV 60 (281)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTCE---EEEEESCH------HHHHHHHH---------H----TBTTEEEEECCT
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCcCE---EEEEeCCH------HHHHHHHH---------H----cCCcEEEEEcCC
Confidence 46899999999999999999999999875 88888863 33333211 1 235789999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcccccCh------------hHHHHHHHHHhHHHHHHHHHHHHHc--CCC
Q psy6053 180 EADELAIKESDRQLLAS-------EVDIMIHGAATIRF------------DEALKKAVLLNTRGTKMMLSLAKEM--KHL 238 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~------------~~~~~~~~~~Nv~gt~~ll~la~~~--~~~ 238 (614)
++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++.+... ++-
T Consensus 61 ~~~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~ 134 (281)
T 3zv4_A 61 RSLQ------DQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSR 134 (281)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred CCHH------HHHHHHHHHHHhcCCCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC
Confidence 9865 6665554 57999999996431 2346778999999999999987652 112
Q ss_pred ceEEEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh---CC
Q psy6053 239 ELFVHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN---NG 315 (614)
Q Consensus 239 k~~V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~---~g 315 (614)
.++|++||..+..... ....|+.||+..+.+.+..+. .+
T Consensus 135 g~iv~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~l~~~la~e~~~~ 176 (281)
T 3zv4_A 135 GSVVFTISNAGFYPNG--------------------------------------GGPLYTATKHAVVGLVRQMAFELAPH 176 (281)
T ss_dssp CEEEEECCGGGTSSSS--------------------------------------SCHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred CeEEEEecchhccCCC--------------------------------------CCchhHHHHHHHHHHHHHHHHHhcCC
Confidence 5899999986532210 014699999999998887765 34
Q ss_pred CCEEEeecceeecccCCCCccccCC-CCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCc
Q psy6053 316 MPCLMLRPSIIIPVWREPLPGWTDN-INGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQ 394 (614)
Q Consensus 316 lp~~IvRp~~I~g~~~~p~~gw~d~-~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~ 394 (614)
+.+..+.||.|..+...+....... .............. .....+...+|+|++++.++..+.. .-..+
T Consensus 177 Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~p~~r~~~pedvA~~v~fL~s~~~~-~~itG 246 (281)
T 3zv4_A 177 VRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSV---------LPIGRMPALEEYTGAYVFFATRGDS-LPATG 246 (281)
T ss_dssp SEEEEEEECSSCC--CCCTTCC--------CCHHHHHHHT---------CTTSSCCCGGGGSHHHHHHHSTTTS-TTCSS
T ss_pred CEEEEEECCcCcCCcccccccccccccccchhHHHHHHhc---------CCCCCCCCHHHHHHHHHHhhccccc-ccccC
Confidence 9999999998866543221000000 00000011111111 1112356789999999988863221 11368
Q ss_pred cEEEeccC
Q psy6053 395 SIVHLTSS 402 (614)
Q Consensus 395 ~vyni~~~ 402 (614)
+++++.++
T Consensus 247 ~~i~vdGG 254 (281)
T 3zv4_A 247 ALLNYDGG 254 (281)
T ss_dssp CEEEESSS
T ss_pred cEEEECCC
Confidence 89999877
No 276
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=99.61 E-value=2e-14 Score=150.63 Aligned_cols=212 Identities=20% Similarity=0.218 Sum_probs=146.4
Q ss_pred ccCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcC-----HHHHHHHHHhChhhHHhhhhccccccCeEE
Q psy6053 99 TFTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKN-----ARQRIEELFASPLFNLLKSVHGQKIIDKVL 173 (614)
Q Consensus 99 ~~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~-----~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~ 173 (614)
.++||+||||||+|+||++++++|++.|.+ |+++.|...... ..+-.+++ + . ...++.
T Consensus 42 ~l~gk~vlVTGas~GIG~aia~~La~~Ga~---Vvl~~r~~~~~~~l~~~l~~~~~~~---------~----~-~g~~~~ 104 (346)
T 3kvo_A 42 RLAGCTVFITGASRGIGKAIALKAAKDGAN---IVIAAKTAQPHPKLLGTIYTAAEEI---------E----A-VGGKAL 104 (346)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHTTTCE---EEEEESCCSCCSSSCCCHHHHHHHH---------H----H-TTCEEE
T ss_pred CCCCCEEEEeCCChHHHHHHHHHHHHCCCE---EEEEECChhhhhhhHHHHHHHHHHH---------H----h-cCCeEE
Confidence 467899999999999999999999999865 888999865321 11111111 1 1 335789
Q ss_pred EEeCCCCCCCCCCCHHHHHHHhc-------cccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHHc---C
Q psy6053 174 PISGDAEADELAIKESDRQLLAS-------EVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKEM---K 236 (614)
Q Consensus 174 ~v~gDl~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~ 236 (614)
++.+|+++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++++... .
T Consensus 105 ~~~~Dv~d~~------~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~ 178 (346)
T 3kvo_A 105 PCIVDVRDEQ------QISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKS 178 (346)
T ss_dssp EEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTC
T ss_pred EEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC
Confidence 9999999876 6666665 78999999996432 3567788999999999999998542 2
Q ss_pred CCceEEEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh---
Q psy6053 237 HLELFVHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN--- 313 (614)
Q Consensus 237 ~~k~~V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~--- 313 (614)
+..++|++||..+..... . .....|+.||+..+.+++..+.
T Consensus 179 ~~g~IV~iSS~~~~~~~~------~------------------------------~~~~~Y~aSKaal~~l~~~la~e~~ 222 (346)
T 3kvo_A 179 KVAHILNISPPLNLNPVW------F------------------------------KQHCAYTIAKYGMSMYVLGMAEEFK 222 (346)
T ss_dssp SSCEEEEECCCCCCCGGG------T------------------------------SSSHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEECCHHHcCCCC------C------------------------------CCchHHHHHHHHHHHHHHHHHHHhc
Confidence 456899999986532210 0 0015799999998888877655
Q ss_pred CCCCEEEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCC
Q psy6053 314 NGMPCLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHR 393 (614)
Q Consensus 314 ~glp~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~ 393 (614)
.|+.+..+.||.+..+. +.... .+ ......+...+|+|++++.++.. .. ...
T Consensus 223 ~gIrvn~v~PG~~i~T~----------------~~~~~-~~--------~~~~~r~~~pedvA~~v~~L~s~-~~--~it 274 (346)
T 3kvo_A 223 GEIAVNALWPKTAIHTA----------------AMDML-GG--------PGIESQCRKVDIIADAAYSIFQK-PK--SFT 274 (346)
T ss_dssp TTCEEEEEECSBCBCCH----------------HHHHH-CC----------CGGGCBCTHHHHHHHHHHHTS-CT--TCC
T ss_pred CCcEEEEEeCCCccccH----------------HHHhh-cc--------ccccccCCCHHHHHHHHHHHHhc-CC--CCC
Confidence 48999999999532220 11111 11 11123356789999999999866 31 124
Q ss_pred ccEE
Q psy6053 394 QSIV 397 (614)
Q Consensus 394 ~~vy 397 (614)
+.++
T Consensus 275 G~~i 278 (346)
T 3kvo_A 275 GNFV 278 (346)
T ss_dssp SCEE
T ss_pred ceEE
Confidence 5555
No 277
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=99.61 E-value=1.1e-14 Score=147.48 Aligned_cols=206 Identities=16% Similarity=0.155 Sum_probs=140.2
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcC-HHHHHHHHHhChhhHHhhhhccccccCeEEEEeCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKN-ARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGD 178 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~-~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gD 178 (614)
+++|+++||||+|+||++++++|++.|.+ |+++.|+..... ..+.+++..+ .+. . ...++.++.+|
T Consensus 4 l~~k~~lVTGas~GIG~aia~~la~~G~~---V~~~~r~~~~~~~~~~~~~~~~~-----~~~----~-~~~~~~~~~~D 70 (274)
T 3e03_A 4 LSGKTLFITGASRGIGLAIALRAARDGAN---VAIAAKSAVANPKLPGTIHSAAA-----AVN----A-AGGQGLALKCD 70 (274)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCCSCCTTSCCCHHHHHH-----HHH----H-HTSEEEEEECC
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCE---EEEEeccchhhhhhHHHHHHHHH-----HHH----h-cCCeEEEEeCC
Confidence 56899999999999999999999999865 889999864311 1111111100 011 1 33578999999
Q ss_pred CCCCCCCCCHHHHHHHhc-------cccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHHc---CCCceE
Q psy6053 179 AEADELAIKESDRQLLAS-------EVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKEM---KHLELF 241 (614)
Q Consensus 179 l~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~ 241 (614)
+++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++.+.+... .+..++
T Consensus 71 v~~~~------~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~i 144 (274)
T 3e03_A 71 IREED------QVRAAVAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHI 144 (274)
T ss_dssp TTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEE
T ss_pred CCCHH------HHHHHHHHHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceE
Confidence 99876 6666654 68999999996421 3567788999999999999987652 244689
Q ss_pred EEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCC
Q psy6053 242 VHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMP 317 (614)
Q Consensus 242 V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp 317 (614)
|++||..+..... . + ....|+.||+..+.+.+..+. +|+.
T Consensus 145 v~isS~~~~~~~~-~------------------------------~-----~~~~Y~asKaal~~l~~~la~e~~~~gI~ 188 (274)
T 3e03_A 145 LTLAPPPSLNPAW-W------------------------------G-----AHTGYTLAKMGMSLVTLGLAAEFGPQGVA 188 (274)
T ss_dssp EECCCCCCCCHHH-H------------------------------H-----HCHHHHHHHHHHHHHHHHHHHHHGGGTCE
T ss_pred EEECChHhcCCCC-C------------------------------C-----CCchHHHHHHHHHHHHHHHHHHhhhcCEE
Confidence 9999986532100 0 0 014799999998888876654 5899
Q ss_pred EEEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhh
Q psy6053 318 CLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAY 386 (614)
Q Consensus 318 ~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~ 386 (614)
+..+.||.+..+.- . .... ......+...+|+|++++.++...
T Consensus 189 vn~v~PG~~v~T~~----------------~-~~~~---------~~~~~~~~~pedvA~~v~~l~s~~ 231 (274)
T 3e03_A 189 INALWPRTVIATDA----------------I-NMLP---------GVDAAACRRPEIMADAAHAVLTRE 231 (274)
T ss_dssp EEEEECSBCBCC---------------------------------CCCGGGSBCTHHHHHHHHHHHTSC
T ss_pred EEEEECCcccccch----------------h-hhcc---------cccccccCCHHHHHHHHHHHhCcc
Confidence 99999984322210 0 0000 111223668899999999988543
No 278
>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...
Probab=99.61 E-value=2.5e-15 Score=156.32 Aligned_cols=172 Identities=15% Similarity=0.137 Sum_probs=124.4
Q ss_pred CCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcC-HHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 101 TGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKN-ARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 101 ~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~-~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
++|+|+||||||+||++++++|++.|.+ |+++.|...... ..+.+++.-. ... ...++.++.+|+
T Consensus 1 ~~k~vlVTGas~GIG~ala~~L~~~G~~---v~~v~r~~~~~~~~~~~~~~~~~----------~~~-~~~~~~~~~~Dv 66 (327)
T 1jtv_A 1 ARTVVLITGCSSGIGLHLAVRLASDPSQ---SFKVYATLRDLKTQGRLWEAARA----------LAC-PPGSLETLQLDV 66 (327)
T ss_dssp CCEEEEESCCSSHHHHHHHHHHHTCTTC---CEEEEEEESCGGGTHHHHHHHHH----------TTC-CTTSEEEEECCT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCc---eEEEEeecCcHHHHHHHHHHhhh----------ccC-CCCceEEEEecC
Confidence 3689999999999999999999999977 666676643322 1121211100 000 125789999999
Q ss_pred CCCCCCCCHHHHHHHhcc-----ccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHHc---CCCceEEEE
Q psy6053 180 EADELAIKESDRQLLASE-----VDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKEM---KHLELFVHI 244 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~~-----vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~V~v 244 (614)
++++ +++.+++. +|++||+||.... .+.++..+++|+.|+.++++.+... .+..++|++
T Consensus 67 ~d~~------~v~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~i 140 (327)
T 1jtv_A 67 RDSK------SVAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVT 140 (327)
T ss_dssp TCHH------HHHHHHHTCTTSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred CCHH------HHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEE
Confidence 9865 78888764 8999999986421 3467788999999999999986321 256799999
Q ss_pred eCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCCEEE
Q psy6053 245 STAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMPCLM 320 (614)
Q Consensus 245 ST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp~~I 320 (614)
||..+.... | ....|+.||+..|.+.+..+. .|+++++
T Consensus 141 sS~~~~~~~----------~----------------------------~~~~Y~aSK~a~~~~~~~la~el~~~gI~v~~ 182 (327)
T 1jtv_A 141 GSVGGLMGL----------P----------------------------FNDVYCASKFALEGLCESLAVLLLPFGVHLSL 182 (327)
T ss_dssp EEGGGTSCC----------T----------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEE
T ss_pred CCcccccCC----------C----------------------------CChHHHHHHHHHHHHHHHHHHHhhhcCcEEEE
Confidence 998654221 0 015799999999998877654 5899999
Q ss_pred eecceeeccc
Q psy6053 321 LRPSIIIPVW 330 (614)
Q Consensus 321 vRp~~I~g~~ 330 (614)
++||.|..+.
T Consensus 183 v~PG~v~T~~ 192 (327)
T 1jtv_A 183 IECGPVHTAF 192 (327)
T ss_dssp EEECCBCC--
T ss_pred EEeCcccChH
Confidence 9999986553
No 279
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=99.61 E-value=7.1e-15 Score=148.89 Aligned_cols=218 Identities=16% Similarity=0.161 Sum_probs=141.9
Q ss_pred ccCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCC
Q psy6053 99 TFTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGD 178 (614)
Q Consensus 99 ~~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gD 178 (614)
.++ |+++||||+|+||++++++|++.|.+ |+++.|+. ++++++.+ .+ .. . .++.++.+|
T Consensus 19 ~~~-k~vlVTGas~gIG~aia~~La~~G~~---V~~~~r~~------~~~~~~~~-----~~----~~-~-~~~~~~~~D 77 (272)
T 2nwq_A 19 HMS-STLFITGATSGFGEACARRFAEAGWS---LVLTGRRE------ERLQALAG-----EL----SA-K-TRVLPLTLD 77 (272)
T ss_dssp --C-CEEEESSTTTSSHHHHHHHHHHTTCE---EEEEESCH------HHHHHHHH-----HH----TT-T-SCEEEEECC
T ss_pred CcC-cEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEECCH------HHHHHHHH-----Hh----hc-C-CcEEEEEcC
Confidence 345 89999999999999999999999876 88888863 22332211 01 11 1 468899999
Q ss_pred CCCCCCCCCHHHHHHHhcc-------ccEEEEcccccCh--------hHHHHHHHHHhHHHHHHHHHHHHHc---CCCc-
Q psy6053 179 AEADELAIKESDRQLLASE-------VDIMIHGAATIRF--------DEALKKAVLLNTRGTKMMLSLAKEM---KHLE- 239 (614)
Q Consensus 179 l~~~~lGLs~~~~~~l~~~-------vd~ViH~AA~v~~--------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k- 239 (614)
+++++ +++.++++ +|++||+||.... .+.++..+++|+.|+.++++.+... .+..
T Consensus 78 v~d~~------~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~ 151 (272)
T 2nwq_A 78 VRDRA------AMSAAVDNLPEEFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGA 151 (272)
T ss_dssp TTCHH------HHHHHHHTCCGGGSSCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTC
T ss_pred CCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 99866 77777764 5999999996432 3567788999999988877766421 2456
Q ss_pred eEEEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CC
Q psy6053 240 LFVHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NG 315 (614)
Q Consensus 240 ~~V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~g 315 (614)
++|++||..+.... | ....|+.||+..|.+.+..+. .|
T Consensus 152 ~IV~isS~~~~~~~----------~----------------------------~~~~Y~asKaa~~~l~~~la~el~~~g 193 (272)
T 2nwq_A 152 SIVNLGSVAGKWPY----------P----------------------------GSHVYGGTKAFVEQFSLNLRCDLQGTG 193 (272)
T ss_dssp EEEEECCGGGTSCC----------T----------------------------TCHHHHHHHHHHHHHHHHHHTTCTTSC
T ss_pred EEEEeCCchhccCC----------C----------------------------CCchHHHHHHHHHHHHHHHHHHhCccC
Confidence 99999998654211 0 015799999999999987764 58
Q ss_pred CCEEEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCcc
Q psy6053 316 MPCLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQS 395 (614)
Q Consensus 316 lp~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~ 395 (614)
+++++++||.|.++.... ...+..... ..... ....+..+|+|++++.++..... ..+.
T Consensus 194 Irvn~v~PG~v~T~~~~~------~~~~~~~~~--------~~~~~----~~~~~~pedvA~~v~~l~s~~~~---~~g~ 252 (272)
T 2nwq_A 194 VRVTNLEPGLCESEFSLV------RFGGDQARY--------DKTYA----GAHPIQPEDIAETIFWIMNQPAH---LNIN 252 (272)
T ss_dssp CEEEEEEECSBC--------------------------------------CCCCBCHHHHHHHHHHHHTSCTT---EEEE
T ss_pred eEEEEEEcCCCcCcchhc------ccccchHHH--------HHhhc----cCCCCCHHHHHHHHHHHhCCCcc---Cccc
Confidence 999999999886653210 000000000 00000 01136889999999988864321 2445
Q ss_pred EEEeccC
Q psy6053 396 IVHLTSS 402 (614)
Q Consensus 396 vyni~~~ 402 (614)
.+.+..+
T Consensus 253 ~i~v~~~ 259 (272)
T 2nwq_A 253 SLEIMPV 259 (272)
T ss_dssp EEEEEET
T ss_pred eEEEeec
Confidence 5555543
No 280
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=99.60 E-value=3.9e-16 Score=162.53 Aligned_cols=179 Identities=15% Similarity=0.086 Sum_probs=118.0
Q ss_pred CcEEEEecccccccHHHHHHHHhhCC----CccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeC
Q psy6053 102 GKTLFMTGASGFLGKVLLEKILRKSP----NVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISG 177 (614)
Q Consensus 102 ~~~VLITGaTGFlG~~Ll~~Ll~~g~----~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~g 177 (614)
.|+|+||||+||+|++++..|++.|. ...+|.++++... .++.+... . .+.+ ..+.++ +
T Consensus 4 ~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~----~~~~~g~~----~-dl~~-------~~~~~~-~ 66 (327)
T 1y7t_A 4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQA----MKALEGVV----M-ELED-------CAFPLL-A 66 (327)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGG----HHHHHHHH----H-HHHT-------TTCTTE-E
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCc----hhhccchh----h-hhhc-------cccccc-C
Confidence 47899999999999999999999874 1236888887532 11111100 0 0000 011122 5
Q ss_pred CCCCCCCCCCHHHHHHHhccccEEEEcccccCh-hHHHHHHHHHhHHHHHHHHHHHHHcCCCc-eEEEEeCceeccCCcc
Q psy6053 178 DAEADELAIKESDRQLLASEVDIMIHGAATIRF-DEALKKAVLLNTRGTKMMLSLAKEMKHLE-LFVHISTAYCHLQEKV 255 (614)
Q Consensus 178 Dl~~~~lGLs~~~~~~l~~~vd~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~la~~~~~~k-~~V~vST~~~~~~~~~ 255 (614)
|+.+.. ++.+.++++|+|||+||..+. ..+..+.++.|+.+|++++++|++..+.+ +++++|+... . ..+
T Consensus 67 di~~~~------~~~~a~~~~D~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~-~-~~~ 138 (327)
T 1y7t_A 67 GLEATD------DPKVAFKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPAN-T-NAL 138 (327)
T ss_dssp EEEEES------CHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHH-H-HHH
T ss_pred CeEecc------ChHHHhCCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchh-h-hHH
Confidence 665543 566777899999999997653 34456789999999999999999962244 6676665420 0 001
Q ss_pred cccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh-CCCCEEEeecceeecccCC
Q psy6053 256 LYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN-NGMPCLMLRPSIIIPVWRE 332 (614)
Q Consensus 256 i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~-~glp~~IvRp~~I~g~~~~ 332 (614)
+.++.. ++.+ | .+.|+.||..+|++...+++ .|++++++||++|||+...
T Consensus 139 ~~~~~~-~~~~--------------------p------~~~yg~tkl~~er~~~~~a~~~g~~~~~vr~~~V~G~h~~ 189 (327)
T 1y7t_A 139 IAYKNA-PGLN--------------------P------RNFTAMTRLDHNRAKAQLAKKTGTGVDRIRRMTVWGNHSS 189 (327)
T ss_dssp HHHHTC-TTSC--------------------G------GGEEECCHHHHHHHHHHHHHHHTCCGGGEECCEEEBCSST
T ss_pred HHHHHc-CCCC--------------------h------hheeccchHHHHHHHHHHHHHhCcChhheeeeEEEcCCCC
Confidence 111100 0011 1 15799999999999988776 6999999999999998653
No 281
>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A
Probab=99.59 E-value=1.3e-14 Score=157.36 Aligned_cols=219 Identities=14% Similarity=0.083 Sum_probs=146.4
Q ss_pred cccCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeC
Q psy6053 98 ETFTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISG 177 (614)
Q Consensus 98 ~~~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~g 177 (614)
..+++|+++||||+|.||.++++.|++.|.+ |+++.|+.. .+.+++..+ ..++.++.+
T Consensus 209 ~~l~gk~~LVTGgsgGIG~aiA~~La~~Ga~---Vvl~~r~~~----~~~l~~~~~---------------~~~~~~~~~ 266 (454)
T 3u0b_A 209 KPLDGKVAVVTGAARGIGATIAEVFARDGAT---VVAIDVDGA----AEDLKRVAD---------------KVGGTALTL 266 (454)
T ss_dssp STTTTCEEEESSCSSHHHHHHHHHHHHTTCE---EEEEECGGG----HHHHHHHHH---------------HHTCEEEEC
T ss_pred cCCCCCEEEEeCCchHHHHHHHHHHHHCCCE---EEEEeCCcc----HHHHHHHHH---------------HcCCeEEEE
Confidence 3457899999999999999999999999865 888888643 233332211 013568999
Q ss_pred CCCCCCCCCCHHHHHHHhc--------cccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHHc---CCCc
Q psy6053 178 DAEADELAIKESDRQLLAS--------EVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKEM---KHLE 239 (614)
Q Consensus 178 Dl~~~~lGLs~~~~~~l~~--------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k 239 (614)
|+++++ +++.+++ .+|+|||+||.... .+.++..+++|+.|+.++.+++... .+..
T Consensus 267 Dvtd~~------~v~~~~~~~~~~~g~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g 340 (454)
T 3u0b_A 267 DVTADD------AVDKITAHVTEHHGGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGG 340 (454)
T ss_dssp CTTSTT------HHHHHHHHHHHHSTTCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTC
T ss_pred ecCCHH------HHHHHHHHHHHHcCCCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCC
Confidence 999987 6666553 39999999997532 3567788999999999999998873 1456
Q ss_pred eEEEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHH----hhCC
Q psy6053 240 LFVHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEA----MNNG 315 (614)
Q Consensus 240 ~~V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~----~~~g 315 (614)
+||++||..+..... ....|+.||+..+.+.+.. ..+|
T Consensus 341 ~iV~iSS~a~~~g~~--------------------------------------g~~~YaasKaal~~l~~~la~e~~~~g 382 (454)
T 3u0b_A 341 RVIGLSSMAGIAGNR--------------------------------------GQTNYATTKAGMIGLAEALAPVLADKG 382 (454)
T ss_dssp EEEEECCHHHHHCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred EEEEEeChHhCCCCC--------------------------------------CCHHHHHHHHHHHHHHHHHHHHhhhcC
Confidence 899999986532210 0157999999555555544 3369
Q ss_pred CCEEEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCcc
Q psy6053 316 MPCLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQS 395 (614)
Q Consensus 316 lp~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~ 395 (614)
++++.+.||.|..+.....+.. ....... . .....+...+|+|+++..++..... -..++
T Consensus 383 I~vn~v~PG~v~T~~~~~~~~~------~~~~~~~-~-----------~~l~r~g~pedvA~~v~fL~s~~a~--~itG~ 442 (454)
T 3u0b_A 383 ITINAVAPGFIETKMTEAIPLA------TREVGRR-L-----------NSLFQGGQPVDVAELIAYFASPASN--AVTGN 442 (454)
T ss_dssp CEEEEEEECSBCC----------------CHHHHH-S-----------BTTSSCBCHHHHHHHHHHHHCGGGT--TCCSC
T ss_pred cEEEEEEcCcccChhhhhcchh------hHHHHHh-h-----------ccccCCCCHHHHHHHHHHHhCCccC--CCCCc
Confidence 9999999998865432211100 0000000 0 0111234678999999988764432 23678
Q ss_pred EEEeccC
Q psy6053 396 IVHLTSS 402 (614)
Q Consensus 396 vyni~~~ 402 (614)
++++.++
T Consensus 443 ~i~vdGG 449 (454)
T 3u0b_A 443 TIRVCGQ 449 (454)
T ss_dssp EEEESSS
T ss_pred EEEECCc
Confidence 8888776
No 282
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=99.59 E-value=1.4e-14 Score=148.08 Aligned_cols=226 Identities=13% Similarity=0.070 Sum_probs=149.1
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEE-ccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILM-RQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGD 178 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~Lv-R~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gD 178 (614)
+++|+++||||+|+||++++++|++.|++ |+++. |+. +++++..+ .++.. ...++.++.+|
T Consensus 7 l~~k~~lVTGas~GIG~aia~~la~~G~~---V~~~~~r~~------~~~~~~~~-----~l~~~----~~~~~~~~~~D 68 (291)
T 1e7w_A 7 PTVPVALVTGAAKRLGRSIAEGLHAEGYA---VCLHYHRSA------AEANALSA-----TLNAR----RPNSAITVQAD 68 (291)
T ss_dssp -CCCEEEETTCSSHHHHHHHHHHHHTTCE---EEEEESSCH------HHHHHHHH-----HHHHH----STTCEEEEECC
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCe---EEEEcCCCH------HHHHHHHH-----HHhhh----cCCeeEEEEee
Confidence 56899999999999999999999999876 88888 753 22222211 11101 23578999999
Q ss_pred CCCCCC-----------CCCHHHHHHHhc-------cccEEEEcccccCh---------------------hHHHHHHHH
Q psy6053 179 AEADEL-----------AIKESDRQLLAS-------EVDIMIHGAATIRF---------------------DEALKKAVL 219 (614)
Q Consensus 179 l~~~~l-----------GLs~~~~~~l~~-------~vd~ViH~AA~v~~---------------------~~~~~~~~~ 219 (614)
+++++- +-..++++.+++ .+|++||+||.... .+.++..++
T Consensus 69 l~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (291)
T 1e7w_A 69 LSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFG 148 (291)
T ss_dssp CSSSCBCCCC----CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHH
T ss_pred cCCcccccccccccccccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHH
Confidence 998750 000013444433 78999999996431 455677899
Q ss_pred HhHHHHHHHHHHHHHc---CC------CceEEEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhc
Q psy6053 220 LNTRGTKMMLSLAKEM---KH------LELFVHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFL 290 (614)
Q Consensus 220 ~Nv~gt~~ll~la~~~---~~------~k~~V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~ 290 (614)
+|+.|+.++++++... .+ ..++|++||..+.... |
T Consensus 149 ~N~~g~~~l~~~~~~~m~~~~~~~~~~~g~Iv~isS~~~~~~~----------~-------------------------- 192 (291)
T 1e7w_A 149 SNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPL----------L-------------------------- 192 (291)
T ss_dssp HHTHHHHHHHHHHHHHHHTSCGGGSCSCEEEEEECCTTTTSCC----------T--------------------------
T ss_pred HHhHHHHHHHHHHHHHHHhcCCCCCCCCcEEEEEechhhcCCC----------C--------------------------
Confidence 9999999999988642 23 4789999998654321 0
Q ss_pred CCCCCchhhhHHHHHHHHHHHhh----CCCCEEEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCcc
Q psy6053 291 GEFPNSYAYTKCLSEGLVVEAMN----NGMPCLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGY 366 (614)
Q Consensus 291 ~~~pn~Y~~SK~~aE~lv~~~~~----~glp~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~ 366 (614)
....|+.||+..+.+.+..+. .|+.+..++||.|..+. + . .+ .......... +-.
T Consensus 193 --~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~-~-~--------~~-~~~~~~~~~~-------p~~- 251 (291)
T 1e7w_A 193 --GYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-D-M--------PP-AVWEGHRSKV-------PLY- 251 (291)
T ss_dssp --TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG-G-S--------CH-HHHHHHHTTC-------TTT-
T ss_pred --CCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccCCc-c-C--------CH-HHHHHHHhhC-------CCC-
Confidence 015799999999888876654 58999999999885442 1 0 11 1111111110 000
Q ss_pred ccceeHHHHHHHHHHHHHhhhhcCCCCccEEEeccC
Q psy6053 367 ADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLTSS 402 (614)
Q Consensus 367 ~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~~~ 402 (614)
.-+...+|+|++++.++..... -..+.++++.++
T Consensus 252 ~r~~~pedvA~~v~~l~s~~~~--~itG~~i~vdGG 285 (291)
T 1e7w_A 252 QRDSSAAEVSDVVIFLCSSKAK--YITGTCVKVDGG 285 (291)
T ss_dssp TSCBCHHHHHHHHHHHHSGGGT--TCCSCEEEESTT
T ss_pred CCCCCHHHHHHHHHHHhCCccc--CccCcEEEECCC
Confidence 0256789999999998864331 136778888776
No 283
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*
Probab=99.59 E-value=1.2e-14 Score=145.95 Aligned_cols=167 Identities=19% Similarity=0.113 Sum_probs=120.9
Q ss_pred cCCcEEEEecccccccHHHHHHHHh---hCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEe
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILR---KSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPIS 176 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~---~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~ 176 (614)
+++|+++||||+|+||++++++|++ .|.+ |+++.|.. +++++..+ .++...+ ..++.++.
T Consensus 4 l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~---V~~~~r~~------~~~~~~~~-----~l~~~~~---~~~~~~~~ 66 (259)
T 1oaa_A 4 LGCAVCVLTGASRGFGRALAPQLARLLSPGSV---MLVSARSE------SMLRQLKE-----ELGAQQP---DLKVVLAA 66 (259)
T ss_dssp CBSEEEEESSCSSHHHHHHHHHHHTTBCTTCE---EEEEESCH------HHHHHHHH-----HHHHHCT---TSEEEEEE
T ss_pred CCCcEEEEeCCCChHHHHHHHHHHHhhcCCCe---EEEEeCCH------HHHHHHHH-----HHHhhCC---CCeEEEEe
Confidence 5689999999999999999999999 7765 88888863 22222211 1111111 25789999
Q ss_pred CCCCCCCCCCCHHHHHHHhc---------ccc--EEEEcccccC----------hhHHHHHHHHHhHHHHHHHHHHHHHc
Q psy6053 177 GDAEADELAIKESDRQLLAS---------EVD--IMIHGAATIR----------FDEALKKAVLLNTRGTKMMLSLAKEM 235 (614)
Q Consensus 177 gDl~~~~lGLs~~~~~~l~~---------~vd--~ViH~AA~v~----------~~~~~~~~~~~Nv~gt~~ll~la~~~ 235 (614)
+|+++++ +++.+++ ++| ++||+||... -.+.++..+++|+.|+.++++.+...
T Consensus 67 ~Dv~~~~------~v~~~~~~~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~ 140 (259)
T 1oaa_A 67 ADLGTEA------GVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNA 140 (259)
T ss_dssp CCTTSHH------HHHHHHHHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHT
T ss_pred cCCCCHH------HHHHHHHHHHhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999865 5555543 358 9999999642 13567788999999999999998763
Q ss_pred C-----CCceEEEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHH
Q psy6053 236 K-----HLELFVHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVE 310 (614)
Q Consensus 236 ~-----~~k~~V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~ 310 (614)
- +..++|++||..+.... | ....|+.||+..+.+.+.
T Consensus 141 ~~~~~~~~g~iv~isS~~~~~~~----------~----------------------------~~~~Y~asKaa~~~~~~~ 182 (259)
T 1oaa_A 141 FQDSPGLSKTVVNISSLCALQPY----------K----------------------------GWGLYCAGKAARDMLYQV 182 (259)
T ss_dssp SCCCTTCEEEEEEECCGGGTSCC----------T----------------------------TCHHHHHHHHHHHHHHHH
T ss_pred HhhccCCCceEEEEcCchhcCCC----------C----------------------------CccHHHHHHHHHHHHHHH
Confidence 1 23579999998764221 0 015799999999999988
Q ss_pred Hhh--CCCCEEEeecceee
Q psy6053 311 AMN--NGMPCLMLRPSIII 327 (614)
Q Consensus 311 ~~~--~glp~~IvRp~~I~ 327 (614)
.+. .++.+..+.||.|-
T Consensus 183 la~e~~~i~vn~v~PG~v~ 201 (259)
T 1oaa_A 183 LAAEEPSVRVLSYAPGPLD 201 (259)
T ss_dssp HHHHCTTEEEEEEECCSBS
T ss_pred HHhhCCCceEEEecCCCcC
Confidence 776 35788888888763
No 284
>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*
Probab=99.58 E-value=7.4e-15 Score=147.10 Aligned_cols=217 Identities=11% Similarity=0.040 Sum_probs=138.8
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCCCC
Q psy6053 103 KTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAEAD 182 (614)
Q Consensus 103 ~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~~~ 182 (614)
|+|+||||||+||++++++|++.|++ |+++.|+.... +.+.++ . . ...++..+ |..
T Consensus 2 k~vlVTGas~gIG~~ia~~l~~~G~~---V~~~~r~~~~~---~~~~~l-~--------~-----~~~~~~~~--d~~-- 57 (254)
T 1zmt_A 2 STAIVTNVKHFGGMGSALRLSEAGHT---VACHDESFKQK---DELEAF-A--------E-----TYPQLKPM--SEQ-- 57 (254)
T ss_dssp CEEEESSTTSTTHHHHHHHHHHTTCE---EEECCGGGGSH---HHHHHH-H--------H-----HCTTSEEC--CCC--
T ss_pred eEEEEeCCCchHHHHHHHHHHHCCCE---EEEEeCCHHHH---HHHHHH-H--------h-----cCCcEEEE--CHH--
Confidence 68999999999999999999999876 88888875432 122221 1 0 11123333 322
Q ss_pred CCCCCHHHHHHHh-------ccccEEEEccccc-C---h----hHHHHHHHHHhHHHHHHHHHHHHHc---CCCceEEEE
Q psy6053 183 ELAIKESDRQLLA-------SEVDIMIHGAATI-R---F----DEALKKAVLLNTRGTKMMLSLAKEM---KHLELFVHI 244 (614)
Q Consensus 183 ~lGLs~~~~~~l~-------~~vd~ViH~AA~v-~---~----~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~V~v 244 (614)
+++.++ .++|++||+||.. . + .+.++..+++|+.|+.++++.+... .+..++|++
T Consensus 58 -------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~i 130 (254)
T 1zmt_A 58 -------EPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFI 130 (254)
T ss_dssp -------SHHHHHHHHHHHHSCCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred -------HHHHHHHHHHHHhCCCCEEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEE
Confidence 233332 3789999999975 2 1 3457788999999999999887531 245799999
Q ss_pred eCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCCEEE
Q psy6053 245 STAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMPCLM 320 (614)
Q Consensus 245 ST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp~~I 320 (614)
||..+.... | ....|+.||+..+.+.+..+. .|+.+++
T Consensus 131 sS~~~~~~~----------~----------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~ 172 (254)
T 1zmt_A 131 TSATPFGPW----------K----------------------------ELSTYTSARAGACTLANALSKELGEYNIPVFA 172 (254)
T ss_dssp CCSTTTSCC----------T----------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCCEEE
T ss_pred CCcccccCC----------C----------------------------CchHHHHHHHHHHHHHHHHHHHhhhcCcEEEE
Confidence 998653221 0 015799999999988877654 5899999
Q ss_pred eecceeecccCCCCc--cccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEE
Q psy6053 321 LRPSIIIPVWREPLP--GWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVH 398 (614)
Q Consensus 321 vRp~~I~g~~~~p~~--gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyn 398 (614)
++||.|+|+...... ..... .+ .......... + ...+...+|+|++++.++..... ...+.+++
T Consensus 173 v~PG~v~~~~~~~~~~T~~~~~--~~-~~~~~~~~~~-------p--~~~~~~p~dvA~~v~~l~s~~~~--~~tG~~~~ 238 (254)
T 1zmt_A 173 IGPNYLHSEDSPYFYPTEPWKT--NP-EHVAHVKKVT-------A--LQRLGTQKELGELVAFLASGSCD--YLTGQVFW 238 (254)
T ss_dssp EEESSBCCBTCCSSCBHHHHTT--CH-HHHHHHHHHS-------S--SSSCBCHHHHHHHHHHHHTTSCG--GGTTCEEE
T ss_pred EecCccccccccccCCCccccc--Ch-HHHHHHhccC-------C--CCCCcCHHHHHHHHHHHhCcccC--CccCCEEE
Confidence 999999776432100 00000 00 1111111100 0 11256889999999988764321 12678898
Q ss_pred eccC
Q psy6053 399 LTSS 402 (614)
Q Consensus 399 i~~~ 402 (614)
+.++
T Consensus 239 vdgG 242 (254)
T 1zmt_A 239 LAGG 242 (254)
T ss_dssp ESTT
T ss_pred ECCC
Confidence 8776
No 285
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=99.56 E-value=9e-15 Score=146.96 Aligned_cols=167 Identities=19% Similarity=0.282 Sum_probs=120.4
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
+++|+++||||+|+||++++++|++.|.+ |+++.|+. +++++..+ .++. ...++.++.+|+
T Consensus 3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~---V~~~~r~~------~~~~~~~~-----~~~~-----~~~~~~~~~~Dv 63 (260)
T 2qq5_A 3 MNGQVCVVTGASRGIGRGIALQLCKAGAT---VYITGRHL------DTLRVVAQ-----EAQS-----LGGQCVPVVCDS 63 (260)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCE---EEEEESCH------HHHHHHHH-----HHHH-----HSSEEEEEECCT
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCE---EEEEeCCH------HHHHHHHH-----HHHH-----cCCceEEEECCC
Confidence 46899999999999999999999999875 88888863 22222211 1111 224788999999
Q ss_pred CCCCCCCCHHHHHHHh--------ccccEEEEccc--cc--------Ch----hHHHHHHHHHhHHHHHHHHHHHHH-c-
Q psy6053 180 EADELAIKESDRQLLA--------SEVDIMIHGAA--TI--------RF----DEALKKAVLLNTRGTKMMLSLAKE-M- 235 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~--------~~vd~ViH~AA--~v--------~~----~~~~~~~~~~Nv~gt~~ll~la~~-~- 235 (614)
++++ +++.++ ..+|++||+|| .. .+ .+.++..+++|+.|+.++.+.+.. +
T Consensus 64 ~~~~------~v~~~~~~~~~~~~g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 137 (260)
T 2qq5_A 64 SQES------EVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMV 137 (260)
T ss_dssp TSHH------HHHHHHHHHHHHHTTCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHG
T ss_pred CCHH------HHHHHHHHHHHhcCCCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHh
Confidence 9865 555544 35799999994 21 11 245677889999999888776653 1
Q ss_pred -CCCceEEEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh-
Q psy6053 236 -KHLELFVHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN- 313 (614)
Q Consensus 236 -~~~k~~V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~- 313 (614)
.+..++|++||..+.... + ...|+.||+..|.+.+..+.
T Consensus 138 ~~~~g~iv~isS~~~~~~~----------~-----------------------------~~~Y~asK~a~~~~~~~la~e 178 (260)
T 2qq5_A 138 PAGQGLIVVISSPGSLQYM----------F-----------------------------NVPYGVGKAACDKLAADCAHE 178 (260)
T ss_dssp GGTCCEEEEECCGGGTSCC----------S-----------------------------SHHHHHHHHHHHHHHHHHHHH
T ss_pred hcCCcEEEEEcChhhcCCC----------C-----------------------------CCchHHHHHHHHHHHHHHHHH
Confidence 245789999998653210 0 14799999999999877653
Q ss_pred ---CCCCEEEeecceeeccc
Q psy6053 314 ---NGMPCLMLRPSIIIPVW 330 (614)
Q Consensus 314 ---~glp~~IvRp~~I~g~~ 330 (614)
.|+++++++||.|..+.
T Consensus 179 ~~~~gi~v~~v~PG~v~T~~ 198 (260)
T 2qq5_A 179 LRRHGVSCVSLWPGIVQTEL 198 (260)
T ss_dssp HGGGTCEEEEEECCCSCTTT
T ss_pred hccCCeEEEEEecCccccHH
Confidence 58999999999986653
No 286
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=99.56 E-value=5.7e-14 Score=138.76 Aligned_cols=218 Identities=12% Similarity=0.106 Sum_probs=149.6
Q ss_pred cccCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeC
Q psy6053 98 ETFTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISG 177 (614)
Q Consensus 98 ~~~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~g 177 (614)
+.|+||+++||||++-||+.+++.|++.|.+ |++..|....... . ...++..+.+
T Consensus 7 dlf~GK~alVTGas~GIG~aia~~la~~Ga~---Vv~~~~~~~~~~~---------------------~-~~~~~~~~~~ 61 (242)
T 4b79_A 7 DIYAGQQVLVTGGSSGIGAAIAMQFAELGAE---VVALGLDADGVHA---------------------P-RHPRIRREEL 61 (242)
T ss_dssp TTTTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESSTTSTTS---------------------C-CCTTEEEEEC
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEeCCHHHHhh---------------------h-hcCCeEEEEe
Confidence 4578999999999999999999999999976 8888887643210 1 3457899999
Q ss_pred CCCCCCCCCCHHHHHHHhc---cccEEEEcccccCh-----hHHHHHHHHHhHHHHHHHHHHHHHc--CCCceEEEEeCc
Q psy6053 178 DAEADELAIKESDRQLLAS---EVDIMIHGAATIRF-----DEALKKAVLLNTRGTKMMLSLAKEM--KHLELFVHISTA 247 (614)
Q Consensus 178 Dl~~~~lGLs~~~~~~l~~---~vd~ViH~AA~v~~-----~~~~~~~~~~Nv~gt~~ll~la~~~--~~~k~~V~vST~ 247 (614)
|+++++ +++++++ ++|++||+||.... .+.++..+++|+.|+..+.+.+..+ ++-.++|.+||.
T Consensus 62 Dv~~~~------~v~~~~~~~g~iDiLVNNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~ 135 (242)
T 4b79_A 62 DITDSQ------RLQRLFEALPRLDVLVNNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASM 135 (242)
T ss_dssp CTTCHH------HHHHHHHHCSCCSEEEECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCG
T ss_pred cCCCHH------HHHHHHHhcCCCCEEEECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeec
Confidence 999865 6777665 68999999997542 3567889999999999888877553 122589999999
Q ss_pred eeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCCEEEeec
Q psy6053 248 YCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMPCLMLRP 323 (614)
Q Consensus 248 ~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp~~IvRp 323 (614)
.+..... ....|+.||+.-..+.+..+. +|+++..+-|
T Consensus 136 ~~~~~~~--------------------------------------~~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~P 177 (242)
T 4b79_A 136 YSTFGSA--------------------------------------DRPAYSASKGAIVQLTRSLACEYAAERIRVNAIAP 177 (242)
T ss_dssp GGTSCCS--------------------------------------SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred cccCCCC--------------------------------------CCHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEe
Confidence 7633211 014799999987777665543 7999999999
Q ss_pred ceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEeccC
Q psy6053 324 SIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLTSS 402 (614)
Q Consensus 324 ~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~~~ 402 (614)
|.|-.+..+. ..........+....+ - --+-..+|+|++++.++..... -..++++++.++
T Consensus 178 G~i~T~m~~~-------~~~~~~~~~~~~~~~P-------l--gR~g~peeiA~~v~fLaSd~a~--~iTG~~l~VDGG 238 (242)
T 4b79_A 178 GWIDTPLGAG-------LKADVEATRRIMQRTP-------L--ARWGEAPEVASAAAFLCGPGAS--FVTGAVLAVDGG 238 (242)
T ss_dssp CSBCCC------------CCCHHHHHHHHHTCT-------T--CSCBCHHHHHHHHHHHTSGGGT--TCCSCEEEESTT
T ss_pred CCCCChhhhc-------ccCCHHHHHHHHhcCC-------C--CCCcCHHHHHHHHHHHhCchhc--CccCceEEECcc
Confidence 9885443211 1111112222222110 0 0134568999999888755432 136778887665
No 287
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=99.56 E-value=3.3e-14 Score=143.65 Aligned_cols=224 Identities=11% Similarity=0.062 Sum_probs=147.0
Q ss_pred cCCcEEEEecc--cccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeC
Q psy6053 100 FTGKTLFMTGA--SGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISG 177 (614)
Q Consensus 100 ~~~~~VLITGa--TGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~g 177 (614)
+++|+|+|||| +|+||++++++|++.|.+ |+++.|+... .++++.+ + ...++.++.+
T Consensus 5 l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~---V~~~~r~~~~-----~~~~~~~---------~----~~~~~~~~~~ 63 (269)
T 2h7i_A 5 LDGKRILVSGIITDSSIAFHIARVAQEQGAQ---LVLTGFDRLR-----LIQRITD---------R----LPAKAPLLEL 63 (269)
T ss_dssp TTTCEEEECCCSSTTSHHHHHHHHHHHTTCE---EEEEECSCHH-----HHHHHHT---------T----SSSCCCEEEC
T ss_pred cCCCEEEEECCCCCCchHHHHHHHHHHCCCE---EEEEecChHH-----HHHHHHH---------h----cCCCceEEEc
Confidence 57899999999 999999999999999875 8888886421 1222211 1 2246788999
Q ss_pred CCCCCCCCCCHHHHHHHhc----------cccEEEEcccccC------------hhHHHHHHHHHhHHHHHHHHHHHHHc
Q psy6053 178 DAEADELAIKESDRQLLAS----------EVDIMIHGAATIR------------FDEALKKAVLLNTRGTKMMLSLAKEM 235 (614)
Q Consensus 178 Dl~~~~lGLs~~~~~~l~~----------~vd~ViH~AA~v~------------~~~~~~~~~~~Nv~gt~~ll~la~~~ 235 (614)
|+++++ +++.+++ ++|++||+||... -.+.++..+++|+.|+.++++.+...
T Consensus 64 Dv~~~~------~v~~~~~~~~~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~ 137 (269)
T 2h7i_A 64 DVQNEE------HLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPI 137 (269)
T ss_dssp CTTCHH------HHHHHHHHHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred cCCCHH------HHHHHHHHHHHHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHh
Confidence 999865 6666655 7999999999654 13456778999999999999998762
Q ss_pred -CCCceEEEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh-
Q psy6053 236 -KHLELFVHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN- 313 (614)
Q Consensus 236 -~~~k~~V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~- 313 (614)
..-.++|++||....+. |. ...|+.||+..+.+.+..+.
T Consensus 138 ~~~~g~iv~iss~~~~~~-----------~~----------------------------~~~Y~asKaa~~~l~~~la~e 178 (269)
T 2h7i_A 138 MNPGGSIVGMDFDPSRAM-----------PA----------------------------YNWMTVAKSALESVNRFVARE 178 (269)
T ss_dssp EEEEEEEEEEECCCSSCC-----------TT----------------------------THHHHHHHHHHHHHHHHHHHH
T ss_pred hccCCeEEEEcCcccccc-----------Cc----------------------------hHHHHHHHHHHHHHHHHHHHH
Confidence 11258999998754211 00 15799999999988877654
Q ss_pred ---CCCCEEEeecceeecccCCCCccccCCCCchH------HHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHH
Q psy6053 314 ---NGMPCLMLRPSIIIPVWREPLPGWTDNINGPT------GLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIW 384 (614)
Q Consensus 314 ---~glp~~IvRp~~I~g~~~~p~~gw~d~~~g~~------~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~ 384 (614)
+|+.+..++||.|-.+... .+........ ......... . + ..+.+...+|+|++++.++.
T Consensus 179 ~~~~gi~vn~v~PG~v~T~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~----~---p-~~rr~~~p~dvA~~v~~L~s 247 (269)
T 2h7i_A 179 AGKYGVRSNLVAAGPIRTLAMS---AIVGGALGEEAGAQIQLLEEGWDQR----A---P-IGWNMKDATPVAKTVCALLS 247 (269)
T ss_dssp HHTTTCEEEEEEECCCCCHHHH---HHHTTTTCHHHHHHHHHHHHHHHHH----C---T-TCCCTTCCHHHHHHHHHHHS
T ss_pred hcccCcEEEEEecCcccchhhh---ccccccchhhHHHHHHHHHHhhhcc----C---C-cccCCCCHHHHHHHHHHHhC
Confidence 5899999999988543110 0000000000 000001000 0 0 00125567899999998885
Q ss_pred hhhhcCCCCccEEEeccC
Q psy6053 385 AYLSQKEHRQSIVHLTSS 402 (614)
Q Consensus 385 ~~~~~~~~~~~vyni~~~ 402 (614)
.... -..++++++.++
T Consensus 248 ~~~~--~itG~~i~vdGG 263 (269)
T 2h7i_A 248 DWLP--ATTGDIIYADGG 263 (269)
T ss_dssp SSCT--TCCSEEEEESTT
T ss_pred chhc--cCcceEEEecCC
Confidence 4321 136778888766
No 288
>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*
Probab=99.54 E-value=2.6e-14 Score=148.15 Aligned_cols=211 Identities=15% Similarity=0.194 Sum_probs=137.3
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCC----CcCHHHHHHHHHhChhhHHhhhhccccccCeEEEE
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKK----GKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPI 175 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~----~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v 175 (614)
+++|+|+||||+|+||++++++|++.|.+ |++..|... ..+ .+++++..+ .++. .... +
T Consensus 7 l~gk~~lVTGas~GIG~~~a~~La~~Ga~---Vv~~~~~~~~~~~~R~-~~~~~~~~~-----~l~~-----~~~~---~ 69 (319)
T 1gz6_A 7 FDGRVVLVTGAGGGLGRAYALAFAERGAL---VVVNDLGGDFKGVGKG-SSAADKVVE-----EIRR-----RGGK---A 69 (319)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCE---EEEECCCBCTTSCBCC-SHHHHHHHH-----HHHH-----TTCE---E
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEcCCcccccccCC-HHHHHHHHH-----HHHh-----hCCe---E
Confidence 57899999999999999999999999875 777665321 000 122222111 1111 1112 2
Q ss_pred eCCCCCCCCCCCHHHHHHHh-------ccccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHHc---CCC
Q psy6053 176 SGDAEADELAIKESDRQLLA-------SEVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKEM---KHL 238 (614)
Q Consensus 176 ~gDl~~~~lGLs~~~~~~l~-------~~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~ 238 (614)
.+|+++.+ +.+.++ .++|++||+||.... .+.++..+++|+.|+.++++++... .+.
T Consensus 70 ~~D~~~~~------~~~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~ 143 (319)
T 1gz6_A 70 VANYDSVE------AGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNY 143 (319)
T ss_dssp EEECCCGG------GHHHHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred EEeCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC
Confidence 47888865 444433 368999999996532 3567788999999999988887431 255
Q ss_pred ceEEEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----C
Q psy6053 239 ELFVHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----N 314 (614)
Q Consensus 239 k~~V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~ 314 (614)
.++|++||..+.... | ....|+.||+..+.+.+.... .
T Consensus 144 grIV~vsS~~~~~~~----------~----------------------------~~~~Y~aSK~a~~~~~~~la~el~~~ 185 (319)
T 1gz6_A 144 GRIIMTASASGIYGN----------F----------------------------GQANYSAAKLGLLGLANTLVIEGRKN 185 (319)
T ss_dssp EEEEEECCHHHHHCC----------T----------------------------TCHHHHHHHHHHHHHHHHHHHHTGGG
T ss_pred CEEEEECChhhccCC----------C----------------------------CCHHHHHHHHHHHHHHHHHHHHhccc
Confidence 799999997542111 0 015799999999988877654 5
Q ss_pred CCCEEEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCc
Q psy6053 315 GMPCLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQ 394 (614)
Q Consensus 315 glp~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~ 394 (614)
|+.+.+++||.+ .+.. .... + ....+.+..+++|++++.++.... ...+
T Consensus 186 gI~vn~v~PG~~-t~~~-------~~~~-~-------------------~~~~~~~~p~dvA~~~~~l~s~~~---~~tG 234 (319)
T 1gz6_A 186 NIHCNTIAPNAG-SRMT-------ETVM-P-------------------EDLVEALKPEYVAPLVLWLCHESC---EENG 234 (319)
T ss_dssp TEEEEEEEEECC-STTT-------GGGS-C-------------------HHHHHHSCGGGTHHHHHHHTSTTC---CCCS
T ss_pred CEEEEEEeCCCc-cccc-------cccC-C-------------------hhhhccCCHHHHHHHHHHHhCchh---hcCC
Confidence 899999999976 2110 0000 0 011234678999999888875432 1367
Q ss_pred cEEEeccC
Q psy6053 395 SIVHLTSS 402 (614)
Q Consensus 395 ~vyni~~~ 402 (614)
.+|++.++
T Consensus 235 ~~~~v~GG 242 (319)
T 1gz6_A 235 GLFEVGAG 242 (319)
T ss_dssp CEEEEETT
T ss_pred CEEEECCC
Confidence 78888766
No 289
>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*
Probab=99.53 E-value=5.5e-14 Score=153.50 Aligned_cols=168 Identities=14% Similarity=0.158 Sum_probs=129.0
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCCC
Q psy6053 102 GKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAEA 181 (614)
Q Consensus 102 ~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~~ 181 (614)
++++|||||+|+||.++++.|++.|.. +|+++.|+.......+.+.+.+. . ...++.++.+|+++
T Consensus 239 ~~~vLITGgsgGIG~alA~~La~~Ga~--~vvl~~R~~~~~~~~~~l~~~l~------------~-~g~~v~~~~~Dvtd 303 (496)
T 3mje_A 239 HGSVLVTGGTGGIGGRVARRLAEQGAA--HLVLTSRRGADAPGAAELRAELE------------Q-LGVRVTIAACDAAD 303 (496)
T ss_dssp CSEEEEETCSSHHHHHHHHHHHHTTCS--EEEEEESSGGGSTTHHHHHHHHH------------H-TTCEEEEEECCTTC
T ss_pred CCEEEEECCCCchHHHHHHHHHHCCCc--EEEEEeCCCCChHHHHHHHHHHH------------h-cCCeEEEEEccCCC
Confidence 489999999999999999999999864 58888887533322222222111 1 33589999999999
Q ss_pred CCCCCCHHHHHHHhc------cccEEEEccccc-Ch-------hHHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEeCc
Q psy6053 182 DELAIKESDRQLLAS------EVDIMIHGAATI-RF-------DEALKKAVLLNTRGTKMMLSLAKEMKHLELFVHISTA 247 (614)
Q Consensus 182 ~~lGLs~~~~~~l~~------~vd~ViH~AA~v-~~-------~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vST~ 247 (614)
++ +++.+++ .+|+|||+||.. .. .+.++..+++|+.|+.++.+++... ...+||++||.
T Consensus 304 ~~------~v~~~~~~i~~~g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~-~~~~iV~~SS~ 376 (496)
T 3mje_A 304 RE------ALAALLAELPEDAPLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADL-DLDAFVLFSSG 376 (496)
T ss_dssp HH------HHHHHHHTCCTTSCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTS-CCSEEEEEEEH
T ss_pred HH------HHHHHHHHHHHhCCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhcc-CCCEEEEEeCh
Confidence 76 7777775 479999999976 21 3557788999999999999999884 78899999998
Q ss_pred eeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhhCCCCEEEeecceee
Q psy6053 248 YCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMNNGMPCLMLRPSIII 327 (614)
Q Consensus 248 ~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~~glp~~IvRp~~I~ 327 (614)
.+.... | .-..|+.+|...+.+.++....|++++.+.||.+.
T Consensus 377 a~~~g~----------~----------------------------g~~~YaAaKa~ldala~~~~~~Gi~v~sV~pG~w~ 418 (496)
T 3mje_A 377 AAVWGS----------G----------------------------GQPGYAAANAYLDALAEHRRSLGLTASSVAWGTWG 418 (496)
T ss_dssp HHHTTC----------T----------------------------TCHHHHHHHHHHHHHHHHHHHTTCCCEEEEECEES
T ss_pred HhcCCC----------C----------------------------CcHHHHHHHHHHHHHHHHHHhcCCeEEEEECCccc
Confidence 653211 0 01479999999999988776689999999999875
Q ss_pred cc
Q psy6053 328 PV 329 (614)
Q Consensus 328 g~ 329 (614)
++
T Consensus 419 ~~ 420 (496)
T 3mje_A 419 EV 420 (496)
T ss_dssp SS
T ss_pred CC
Confidence 43
No 290
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=99.52 E-value=3e-13 Score=135.42 Aligned_cols=226 Identities=12% Similarity=0.104 Sum_probs=149.3
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
++||+++||||++.||+.++++|++.|.. |++..|..... +.++++.+ ...++.++.+|+
T Consensus 5 L~gKvalVTGas~GIG~aia~~la~~Ga~---Vv~~~r~~~~~---~~~~~~~~--------------~~~~~~~~~~Dv 64 (258)
T 4gkb_A 5 LQDKVVIVTGGASGIGGAISMRLAEERAI---PVVFARHAPDG---AFLDALAQ--------------RQPRATYLPVEL 64 (258)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESSCCCH---HHHHHHHH--------------HCTTCEEEECCT
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCE---EEEEECCcccH---HHHHHHHh--------------cCCCEEEEEeec
Confidence 67999999999999999999999999865 88888876543 22222211 235688999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcccccC------hhHHHHHHHHHhHHHHHHHHHHHHHc--CCCceEEEE
Q psy6053 180 EADELAIKESDRQLLAS-------EVDIMIHGAATIR------FDEALKKAVLLNTRGTKMMLSLAKEM--KHLELFVHI 244 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~------~~~~~~~~~~~Nv~gt~~ll~la~~~--~~~k~~V~v 244 (614)
++++ +.+.+++ ++|++||+||... ..+.++..+++|+.|+..+.+.+..+ .+-.++|++
T Consensus 65 ~~~~------~v~~~v~~~~~~~G~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVni 138 (258)
T 4gkb_A 65 QDDA------QCRDAVAQTIATFGRLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNI 138 (258)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred CCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEE
Confidence 9866 6655553 5899999999632 24667888999999999888877542 112589999
Q ss_pred eCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCCEEE
Q psy6053 245 STAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMPCLM 320 (614)
Q Consensus 245 ST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp~~I 320 (614)
||..+..... ....|+.||+.-+.+.+..+. +|+++..
T Consensus 139 sS~~~~~~~~--------------------------------------~~~~Y~asKaav~~ltr~lA~ela~~gIrVN~ 180 (258)
T 4gkb_A 139 SSKTAVTGQG--------------------------------------NTSGYCASKGAQLALTREWAVALREHGVRVNA 180 (258)
T ss_dssp CCTHHHHCCS--------------------------------------SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEE
T ss_pred eehhhccCCC--------------------------------------CchHHHHHHHHHHHHHHHHHHHhcccCeEEEE
Confidence 9997532211 014799999987777765543 7999999
Q ss_pred eecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEec
Q psy6053 321 LRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLT 400 (614)
Q Consensus 321 vRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~ 400 (614)
+-||.|-.+..+ .|......+...........+ ...-+...+|+|++++.++..... -..++++++.
T Consensus 181 V~PG~i~T~~~~---~~~~~~~~~~~~~~~~~~~~p--------lg~R~g~peeiA~~v~fLaS~~a~--~iTG~~i~VD 247 (258)
T 4gkb_A 181 VIPAEVMTPLYR---NWIATFEDPEAKLAEIAAKVP--------LGRRFTTPDEIADTAVFLLSPRAS--HTTGEWLFVD 247 (258)
T ss_dssp EEECSBCCSCC--------------CHHHHHHTTCT--------TTTSCBCHHHHHHHHHHHHSGGGT--TCCSCEEEES
T ss_pred EecCCCCChhHh---hhhhcccChHHHHHHHHhcCC--------CCCCCcCHHHHHHHHHHHhCchhc--CccCCeEEEC
Confidence 999988554321 111111111112222211110 001244568999999888855432 2367888887
Q ss_pred cC
Q psy6053 401 SS 402 (614)
Q Consensus 401 ~~ 402 (614)
+|
T Consensus 248 GG 249 (258)
T 4gkb_A 248 GG 249 (258)
T ss_dssp TT
T ss_pred CC
Confidence 76
No 291
>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}
Probab=99.52 E-value=7.6e-14 Score=138.83 Aligned_cols=218 Identities=10% Similarity=0.019 Sum_probs=135.2
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEE-E--ccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCC
Q psy6053 102 GKTLFMTGASGFLGKVLLEKILRKSPNVKKIYIL-M--RQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGD 178 (614)
Q Consensus 102 ~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~L-v--R~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gD 178 (614)
+|+++||||||+||++++++|++.|++ |+++ . |+. +++++..+. . .+..+. |
T Consensus 1 ~k~vlVTGas~gIG~~ia~~l~~~G~~---V~~~~~~~r~~------~~~~~~~~~-------------~-~~~~~~--~ 55 (244)
T 1zmo_A 1 MVIALVTHARHFAGPAAVEALTQDGYT---VVCHDASFADA------AERQRFESE-------------N-PGTIAL--A 55 (244)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHTTCE---EEECCGGGGSH------HHHHHHHHH-------------S-TTEEEC--C
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCE---EEEecCCcCCH------HHHHHHHHH-------------h-CCCccc--C
Confidence 578999999999999999999999876 7887 5 753 233322110 1 111221 2
Q ss_pred CCCCCCCCCHHHHHHHh---ccccEEEEcccccCh----------hHHHHHHHHHhHHHHHHHHHHHHHc---CCCceEE
Q psy6053 179 AEADELAIKESDRQLLA---SEVDIMIHGAATIRF----------DEALKKAVLLNTRGTKMMLSLAKEM---KHLELFV 242 (614)
Q Consensus 179 l~~~~lGLs~~~~~~l~---~~vd~ViH~AA~v~~----------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~V 242 (614)
..+.. +.++.+. .++|++||+||.... .+.++..+++|+.|+.++++++... .+..++|
T Consensus 56 ~~~v~-----~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv 130 (244)
T 1zmo_A 56 EQKPE-----RLVDATLQHGEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVI 130 (244)
T ss_dssp CCCGG-----GHHHHHGGGSSCEEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHH-----HHHHHHHHHcCCCCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEE
Confidence 22211 1233333 268999999996543 2567788999999999999887531 3457899
Q ss_pred EEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCCE
Q psy6053 243 HISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMPC 318 (614)
Q Consensus 243 ~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp~ 318 (614)
++||..+.... | ....|+.||+..+.+.+..+. .|+.+
T Consensus 131 ~isS~~~~~~~----------~----------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v 172 (244)
T 1zmo_A 131 FITSSVGKKPL----------A----------------------------YNPLYGPARAATVALVESAAKTLSRDGILL 172 (244)
T ss_dssp EECCGGGTSCC----------T----------------------------TCTTHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred EECChhhCCCC----------C----------------------------CchHHHHHHHHHHHHHHHHHHHHhhcCcEE
Confidence 99998654321 0 015799999999988877654 58999
Q ss_pred EEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEE
Q psy6053 319 LMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVH 398 (614)
Q Consensus 319 ~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyn 398 (614)
++++||.|-.+...+ | .....+ .......... . + ..-+...+|+|++++.++..... ...+.++.
T Consensus 173 ~~v~PG~v~T~~~~~---~-~~~~~~-~~~~~~~~~~---~---p--~~r~~~pe~vA~~v~~l~s~~~~--~~tG~~i~ 237 (244)
T 1zmo_A 173 YAIGPNFFNNPTYFP---T-SDWENN-PELRERVDRD---V---P--LGRLGRPDEMGALITFLASRRAA--PIVGQFFA 237 (244)
T ss_dssp EEEEESSBCBTTTBC---H-HHHHHC-HHHHHHHHHH---C---T--TCSCBCHHHHHHHHHHHHTTTTG--GGTTCEEE
T ss_pred EEEeeCCCcCCcccc---c-ccccch-HHHHHHHhcC---C---C--CCCCcCHHHHHHHHHHHcCcccc--CccCCEEE
Confidence 999999885442100 0 000000 0111111100 0 0 01256789999999988865321 12577887
Q ss_pred eccC
Q psy6053 399 LTSS 402 (614)
Q Consensus 399 i~~~ 402 (614)
+.++
T Consensus 238 vdgG 241 (244)
T 1zmo_A 238 FTGG 241 (244)
T ss_dssp ESTT
T ss_pred eCCC
Confidence 7665
No 292
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=99.50 E-value=1e-12 Score=131.00 Aligned_cols=224 Identities=13% Similarity=0.110 Sum_probs=148.6
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
++||+++||||++.||+.++++|++.|.. |++..|.. +++++..+ .++ + ...++.++.+|+
T Consensus 5 L~gKvalVTGas~GIG~aiA~~la~~Ga~---Vv~~~~~~------~~~~~~~~-----~i~----~-~g~~~~~~~~Dv 65 (254)
T 4fn4_A 5 LKNKVVIVTGAGSGIGRAIAKKFALNDSI---VVAVELLE------DRLNQIVQ-----ELR----G-MGKEVLGVKADV 65 (254)
T ss_dssp GTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCH------HHHHHHHH-----HHH----H-TTCCEEEEECCT
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCE---EEEEECCH------HHHHHHHH-----HHH----h-cCCcEEEEEccC
Confidence 57999999999999999999999999865 78888853 33333221 111 1 345789999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcccccC----h----hHHHHHHHHHhHHHHHHHHHHHHHc---CCCceE
Q psy6053 180 EADELAIKESDRQLLAS-------EVDIMIHGAATIR----F----DEALKKAVLLNTRGTKMMLSLAKEM---KHLELF 241 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~----~----~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~ 241 (614)
++++ +.+.+++ ++|++||+||... + .+.++..+++|+.|+..+.+.+... .+-.++
T Consensus 66 t~~~------~v~~~~~~~~~~~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~I 139 (254)
T 4fn4_A 66 SKKK------DVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVI 139 (254)
T ss_dssp TSHH------HHHHHHHHHHHHHSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEE
Confidence 9976 6766654 5899999999532 2 3568889999999998888776542 234689
Q ss_pred EEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCC
Q psy6053 242 VHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMP 317 (614)
Q Consensus 242 V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp 317 (614)
|++||..+..... ....|+.||+.-..+.+..+. +|++
T Consensus 140 VnisS~~g~~~~~--------------------------------------~~~~Y~asKaal~~ltr~lA~ela~~gIr 181 (254)
T 4fn4_A 140 VNTASIAGIRGGF--------------------------------------AGAPYTVAKHGLIGLTRSIAAHYGDQGIR 181 (254)
T ss_dssp EEECCGGGTCSSS--------------------------------------SCHHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred EEEechhhcCCCC--------------------------------------CChHHHHHHHHHHHHHHHHHHHhhhhCeE
Confidence 9999997643210 014799999977766655543 7999
Q ss_pred EEEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEE
Q psy6053 318 CLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIV 397 (614)
Q Consensus 318 ~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vy 397 (614)
+..+-||.|-.+... ..............+... +.. -+-..+|+|++++.++..... --.++++
T Consensus 182 VN~V~PG~i~T~~~~------~~~~~~~~~~~~~~~~~~------~~~--R~g~pediA~~v~fLaSd~a~--~iTG~~i 245 (254)
T 4fn4_A 182 AVAVLPGTVKTNIGL------GSSKPSELGMRTLTKLMS------LSS--RLAEPEDIANVIVFLASDEAS--FVNGDAV 245 (254)
T ss_dssp EEEEEECSBCSSCTT------SCSSCCHHHHHHHHHHHT------TCC--CCBCHHHHHHHHHHHHSGGGT--TCCSCEE
T ss_pred EEEEEeCCCCCcccc------cccCCcHHHHHHHHhcCC------CCC--CCcCHHHHHHHHHHHhCchhc--CCcCCEE
Confidence 999999988544211 011111111111111000 000 123468999999988865432 1367888
Q ss_pred EeccC
Q psy6053 398 HLTSS 402 (614)
Q Consensus 398 ni~~~ 402 (614)
++.+|
T Consensus 246 ~VDGG 250 (254)
T 4fn4_A 246 VVDGG 250 (254)
T ss_dssp EESTT
T ss_pred EeCCC
Confidence 88766
No 293
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=99.50 E-value=1e-12 Score=130.43 Aligned_cols=208 Identities=11% Similarity=0.092 Sum_probs=144.2
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCCC
Q psy6053 102 GKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAEA 181 (614)
Q Consensus 102 ~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~~ 181 (614)
+|+|+||||++.||+.++++|++.|.+ |++..|.+ ++++++.+ ...++..+.+|+++
T Consensus 2 nK~vlVTGas~GIG~aia~~la~~Ga~---V~~~~~~~------~~~~~~~~--------------~~~~~~~~~~Dv~~ 58 (247)
T 3ged_A 2 NRGVIVTGGGHGIGKQICLDFLEAGDK---VCFIDIDE------KRSADFAK--------------ERPNLFYFHGDVAD 58 (247)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCE---EEEEESCH------HHHHHHHT--------------TCTTEEEEECCTTS
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCE---EEEEeCCH------HHHHHHHH--------------hcCCEEEEEecCCC
Confidence 489999999999999999999999976 78888863 33443322 23468899999999
Q ss_pred CCCCCCHHHHHHHhc-------cccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHHc--CCCceEEEEe
Q psy6053 182 DELAIKESDRQLLAS-------EVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKEM--KHLELFVHIS 245 (614)
Q Consensus 182 ~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~--~~~k~~V~vS 245 (614)
++ +.+.+++ ++|++||+||.... .+.++..+++|+.|+..+.+.+..+ ++-.++|++|
T Consensus 59 ~~------~v~~~v~~~~~~~g~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInis 132 (247)
T 3ged_A 59 PL------TLKKFVEYAMEKLQRIDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIA 132 (247)
T ss_dssp HH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred HH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEe
Confidence 76 6666553 68999999986432 4668889999999999888877542 1226899999
Q ss_pred CceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh---CCCCEEEee
Q psy6053 246 TAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN---NGMPCLMLR 322 (614)
Q Consensus 246 T~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~---~glp~~IvR 322 (614)
|..+..... ....|+.||+.-+.+.+..+. +++.+..+-
T Consensus 133 S~~~~~~~~--------------------------------------~~~~Y~asKaal~~ltk~lA~ela~~IrVN~I~ 174 (247)
T 3ged_A 133 STRAFQSEP--------------------------------------DSEAYASAKGGIVALTHALAMSLGPDVLVNCIA 174 (247)
T ss_dssp CGGGTSCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEE
T ss_pred ecccccCCC--------------------------------------CCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEe
Confidence 987643210 014799999977777665544 489999999
Q ss_pred cceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEeccC
Q psy6053 323 PSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLTSS 402 (614)
Q Consensus 323 p~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~~~ 402 (614)
||.|-.+..+ .. ........ |. --+...+|+|++++.++.... ..++++++.+|
T Consensus 175 PG~i~t~~~~-------~~------~~~~~~~~----Pl-----~R~g~pediA~~v~fL~s~~~----iTG~~i~VDGG 228 (247)
T 3ged_A 175 PGWINVTEQQ-------EF------TQEDCAAI----PA-----GKVGTPKDISNMVLFLCQQDF----ITGETIIVDGG 228 (247)
T ss_dssp ECSBCCCC----------C------CHHHHHTS----TT-----SSCBCHHHHHHHHHHHHHCSS----CCSCEEEESTT
T ss_pred cCcCCCCCcH-------HH------HHHHHhcC----CC-----CCCcCHHHHHHHHHHHHhCCC----CCCCeEEECcC
Confidence 9987433211 10 00111110 00 013456899999999886432 37888888777
No 294
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=99.48 E-value=4.4e-13 Score=135.03 Aligned_cols=228 Identities=14% Similarity=0.109 Sum_probs=150.1
Q ss_pred ccccccCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEE
Q psy6053 95 RIGETFTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLP 174 (614)
Q Consensus 95 ~i~~~~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~ 174 (614)
.+.+.++||+++||||++.||+.+++.|++.|.+ |++..|++ +++++..+ + ...++..
T Consensus 22 ~Ms~rL~gKvalVTGas~GIG~aiA~~la~~Ga~---V~i~~r~~------~~l~~~~~---------~----~g~~~~~ 79 (273)
T 4fgs_A 22 SMTQRLNAKIAVITGATSGIGLAAAKRFVAEGAR---VFITGRRK------DVLDAAIA---------E----IGGGAVG 79 (273)
T ss_dssp ---CTTTTCEEEEESCSSHHHHHHHHHHHHTTCE---EEEEESCH------HHHHHHHH---------H----HCTTCEE
T ss_pred hhcchhCCCEEEEeCcCCHHHHHHHHHHHHCCCE---EEEEECCH------HHHHHHHH---------H----cCCCeEE
Confidence 3445588999999999999999999999999976 88888863 34443321 1 2246788
Q ss_pred EeCCCCCCCCCCCHHHHHHHhc-------cccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHHc-CCCc
Q psy6053 175 ISGDAEADELAIKESDRQLLAS-------EVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKEM-KHLE 239 (614)
Q Consensus 175 v~gDl~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~-~~~k 239 (614)
+.+|+++++ +.+.+++ ++|++||+||.... .+.++..+++|+.|+..+.+.+... .+-.
T Consensus 80 ~~~Dv~~~~------~v~~~~~~~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G 153 (273)
T 4fgs_A 80 IQADSANLA------ELDRLYEKVKAEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGS 153 (273)
T ss_dssp EECCTTCHH------HHHHHHHHHHHHHSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEE
T ss_pred EEecCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCC
Confidence 999999976 6666654 58999999996432 4678889999999999999888652 2334
Q ss_pred eEEEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CC
Q psy6053 240 LFVHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NG 315 (614)
Q Consensus 240 ~~V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~g 315 (614)
++|.+||..+..... ....|+.||+....+.+..+. +|
T Consensus 154 ~IInisS~~~~~~~~--------------------------------------~~~~Y~asKaav~~ltr~lA~Ela~~g 195 (273)
T 4fgs_A 154 SVVLTGSTAGSTGTP--------------------------------------AFSVYAASKAALRSFARNWILDLKDRG 195 (273)
T ss_dssp EEEEECCGGGGSCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHTTTSC
T ss_pred eEEEEeehhhccCCC--------------------------------------CchHHHHHHHHHHHHHHHHHHHhcccC
Confidence 799999986532210 014799999988877776544 68
Q ss_pred CCEEEeecceeecccCCCCccccCCCC-chHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCc
Q psy6053 316 MPCLMLRPSIIIPVWREPLPGWTDNIN-GPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQ 394 (614)
Q Consensus 316 lp~~IvRp~~I~g~~~~p~~gw~d~~~-g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~ 394 (614)
+++..+-||.|-.+.-.. +..... ....+...+.... | -. -+-..+|+|++++.++..... -..+
T Consensus 196 IrVN~V~PG~i~T~~~~~---~~~~~~~~~~~~~~~~~~~~----P---lg--R~g~peeiA~~v~FLaSd~a~--~iTG 261 (273)
T 4fgs_A 196 IRINTLSPGPTETTGLVE---LAGKDPVQQQGLLNALAAQV----P---MG--RVGRAEEVAAAALFLASDDSS--FVTG 261 (273)
T ss_dssp EEEEEEEECSBCC------------CHHHHHHHHHHHHHHS----T---TS--SCBCHHHHHHHHHHHHSGGGT--TCCS
T ss_pred eEEEEEeeCCCCChhHHH---hhccCchhhHHHHHHHHhcC----C---CC--CCcCHHHHHHHHHHHhCchhc--CccC
Confidence 999999999885442111 100000 0111222222111 0 00 133468999999988865432 1367
Q ss_pred cEEEeccC
Q psy6053 395 SIVHLTSS 402 (614)
Q Consensus 395 ~vyni~~~ 402 (614)
++..+.+|
T Consensus 262 ~~i~VDGG 269 (273)
T 4fgs_A 262 AELFVDGG 269 (273)
T ss_dssp CEEEESTT
T ss_pred CeEeECcC
Confidence 78887765
No 295
>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}
Probab=99.48 E-value=2.7e-13 Score=149.60 Aligned_cols=228 Identities=13% Similarity=0.067 Sum_probs=153.6
Q ss_pred cccCCcEEEEecccccccHHHHHHHHhhCCCccEEEEE-EccCCC----------cC-HHHHHHHHHhChhhHHhhhhcc
Q psy6053 98 ETFTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYIL-MRQKKG----------KN-ARQRIEELFASPLFNLLKSVHG 165 (614)
Q Consensus 98 ~~~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~L-vR~~~~----------~~-~~~Rl~~~~~~~~f~~l~~~~p 165 (614)
.+-.++++|||||+|.||.++++.|++.|.. +|+++ .|+... .. ..+-++++ .
T Consensus 247 ~~~~~~~vLITGgsgGIG~~lA~~La~~G~~--~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l---------~---- 311 (525)
T 3qp9_A 247 WWQADGTVLVTGAEEPAAAEAARRLARDGAG--HLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAEL---------A---- 311 (525)
T ss_dssp SSCTTSEEEESSTTSHHHHHHHHHHHHHTCC--EEEEEECCCC---------------CHHHHHHH---------H----
T ss_pred eecCCCEEEEECCCCcHHHHHHHHHHHcCCC--EEEEEeCCCCCCccccccccccCHHHHHHHHHH---------H----
Confidence 4557899999999999999999999999866 36666 776422 11 11111111 1
Q ss_pred ccccCeEEEEeCCCCCCCCCCCHHHHHHHhcc------ccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHH
Q psy6053 166 QKIIDKVLPISGDAEADELAIKESDRQLLASE------VDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLA 232 (614)
Q Consensus 166 ~~~~~~v~~v~gDl~~~~lGLs~~~~~~l~~~------vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la 232 (614)
. ...++.++.+|+++++ +++.+++. +|+|||+||.... .+.++..+++|+.|+.++.+++
T Consensus 312 ~-~g~~v~~~~~Dvtd~~------~v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~ 384 (525)
T 3qp9_A 312 D-LGATATVVTCDLTDAE------AAARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLL 384 (525)
T ss_dssp H-HTCEEEEEECCTTSHH------HHHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred h-cCCEEEEEECCCCCHH------HHHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 1 3357999999999976 78888764 6999999997532 3567788999999999999999
Q ss_pred HHcCC----CceEEEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHH
Q psy6053 233 KEMKH----LELFVHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLV 308 (614)
Q Consensus 233 ~~~~~----~k~~V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv 308 (614)
..... ..+||++||..+..... .-..|+.+|...+.+.
T Consensus 385 ~~~~~~~~~~~~iV~~SS~a~~~g~~--------------------------------------g~~~YaaaKa~l~~lA 426 (525)
T 3qp9_A 385 REAAAAGGRPPVLVLFSSVAAIWGGA--------------------------------------GQGAYAAGTAFLDALA 426 (525)
T ss_dssp HHTC----CCCEEEEEEEGGGTTCCT--------------------------------------TCHHHHHHHHHHHHHH
T ss_pred ccccccCCCCCEEEEECCHHHcCCCC--------------------------------------CCHHHHHHHHHHHHHH
Confidence 88421 78999999986532210 0157999999999987
Q ss_pred HHHhhCCCCEEEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhh
Q psy6053 309 VEAMNNGMPCLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLS 388 (614)
Q Consensus 309 ~~~~~~glp~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~ 388 (614)
.+....|++++.+.||.+ .+ ++ ... . .....+.. .....++.+++++++..++....
T Consensus 427 ~~~~~~gi~v~sI~pG~~-~t---gm---~~~--~--~~~~~~~~-----------~g~~~l~pee~a~~l~~~l~~~~- 483 (525)
T 3qp9_A 427 GQHRADGPTVTSVAWSPW-EG---SR---VTE--G--ATGERLRR-----------LGLRPLAPATALTALDTALGHGD- 483 (525)
T ss_dssp TSCCSSCCEEEEEEECCB-TT---SG---GGS--S--HHHHHHHH-----------TTBCCBCHHHHHHHHHHHHHHTC-
T ss_pred HHHHhCCCCEEEEECCcc-cc---cc---ccc--h--hhHHHHHh-----------cCCCCCCHHHHHHHHHHHHhCCC-
Confidence 666557999999999987 22 11 100 0 01111111 01234778999999998886543
Q ss_pred cCCCCccEEEeccCCcccccHHHHHHHHhhh
Q psy6053 389 QKEHRQSIVHLTSSQEWQVSWQEIIDIGKSI 419 (614)
Q Consensus 389 ~~~~~~~vyni~~~~~~~it~~e~~~~~~~~ 419 (614)
..+ +.. .+.|..+...+...
T Consensus 484 -----~~v--~v~----~~dw~~~~~~~~~~ 503 (525)
T 3qp9_A 484 -----TAV--TIA----DVDWSSFAPGFTTA 503 (525)
T ss_dssp -----SEE--EEC----CBCHHHHHHHHHSS
T ss_pred -----CeE--EEE----eCCHHHHHhhcccc
Confidence 222 222 36787777665543
No 296
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=99.47 E-value=3.6e-13 Score=134.38 Aligned_cols=222 Identities=14% Similarity=0.052 Sum_probs=147.9
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
++||+++||||++.||+.++++|++.|.+ |++..|+. +++++..+ .+++ ...++..+.+|+
T Consensus 7 L~gKvalVTGas~GIG~aia~~la~~Ga~---Vvi~~~~~------~~~~~~~~-----~l~~-----~g~~~~~~~~Dv 67 (255)
T 4g81_D 7 LTGKTALVTGSARGLGFAYAEGLAAAGAR---VILNDIRA------TLLAESVD-----TLTR-----KGYDAHGVAFDV 67 (255)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCE---EEECCSCH------HHHHHHHH-----HHHH-----TTCCEEECCCCT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEECCH------HHHHHHHH-----HHHh-----cCCcEEEEEeeC
Confidence 57999999999999999999999999976 77777753 23332211 1111 335788999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHH-c---CCCceE
Q psy6053 180 EADELAIKESDRQLLAS-------EVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKE-M---KHLELF 241 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~-~---~~~k~~ 241 (614)
++++ +.+.+++ ++|++||+||.... .+.++..+++|+.|+..+.+.+.. | ++-.++
T Consensus 68 ~~~~------~v~~~~~~~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~I 141 (255)
T 4g81_D 68 TDEL------AIEAAFSKLDAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKI 141 (255)
T ss_dssp TCHH------HHHHHHHHHHHTTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred CCHH------HHHHHHHHHHHHCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEE
Confidence 9976 6666654 58999999996532 467888999999999988876643 2 244689
Q ss_pred EEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCC
Q psy6053 242 VHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMP 317 (614)
Q Consensus 242 V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp 317 (614)
|.+||..+..... ....|+.||+.-+.+.+..+. +|++
T Consensus 142 VnisS~~~~~~~~--------------------------------------~~~~Y~asKaal~~ltr~lA~ela~~gIr 183 (255)
T 4g81_D 142 INIGSLTSQAARP--------------------------------------TVAPYTAAKGGIKMLTCSMAAEWAQFNIQ 183 (255)
T ss_dssp EEECCGGGTSBCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred EEEeehhhcCCCC--------------------------------------CchhHHHHHHHHHHHHHHHHHHhcccCeE
Confidence 9999997643211 014799999977776665543 7999
Q ss_pred EEEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEE
Q psy6053 318 CLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIV 397 (614)
Q Consensus 318 ~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vy 397 (614)
+..+-||.|-.+..+. ..........+.... | -. -+...+|+|++++.++..... -..++++
T Consensus 184 VN~V~PG~i~T~~~~~-------~~~~~~~~~~~~~~~----P---l~--R~g~pediA~~v~fL~S~~a~--~iTG~~i 245 (255)
T 4g81_D 184 TNAIGPGYILTDMNTA-------LIEDKQFDSWVKSST----P---SQ--RWGRPEELIGTAIFLSSKASD--YINGQII 245 (255)
T ss_dssp EEEEEECSBCCGGGHH-------HHTCHHHHHHHHHHS----T---TC--SCBCGGGGHHHHHHHHSGGGT--TCCSCEE
T ss_pred EEEEeeCCCCCchhhc-------ccCCHHHHHHHHhCC----C---CC--CCcCHHHHHHHHHHHhCchhC--CCcCCEE
Confidence 9999999885442110 000011111111111 0 00 133468999999888754432 2367788
Q ss_pred EeccC
Q psy6053 398 HLTSS 402 (614)
Q Consensus 398 ni~~~ 402 (614)
.+.+|
T Consensus 246 ~VDGG 250 (255)
T 4g81_D 246 YVDGG 250 (255)
T ss_dssp EESTT
T ss_pred EECCC
Confidence 88766
No 297
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=99.46 E-value=9.6e-13 Score=130.26 Aligned_cols=220 Identities=13% Similarity=0.085 Sum_probs=146.7
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
++||+++||||++.||+.+++.|.+.|.+ |++..|.... +..+++ ++ ...++..+.+|+
T Consensus 7 L~GKvalVTGas~GIG~aiA~~la~~Ga~---Vvi~~r~~~~----~~~~~~---------~~-----~g~~~~~~~~Dv 65 (247)
T 4hp8_A 7 LEGRKALVTGANTGLGQAIAVGLAAAGAE---VVCAARRAPD----ETLDII---------AK-----DGGNASALLIDF 65 (247)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCE---EEEEESSCCH----HHHHHH---------HH-----TTCCEEEEECCT
T ss_pred CCCCEEEEeCcCCHHHHHHHHHHHHcCCE---EEEEeCCcHH----HHHHHH---------HH-----hCCcEEEEEccC
Confidence 57999999999999999999999999976 7888886431 222222 11 335788999999
Q ss_pred CCCCCCCCHHHHHHHhc--cccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHH-c---CCCceEEEEeC
Q psy6053 180 EADELAIKESDRQLLAS--EVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKE-M---KHLELFVHIST 246 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~--~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~-~---~~~k~~V~vST 246 (614)
+++. +.+.+++ ++|++||+||.... .+.++..+++|+.|+..+.+.+.. | ++-.++|.+||
T Consensus 66 ~d~~------~v~~~~~~g~iDiLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS 139 (247)
T 4hp8_A 66 ADPL------AAKDSFTDAGFDILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIAS 139 (247)
T ss_dssp TSTT------TTTTSSTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECC
T ss_pred CCHH------HHHHHHHhCCCCEEEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEec
Confidence 9976 4444443 58999999997532 467888999999999988886543 2 23468999999
Q ss_pred ceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCCEEEee
Q psy6053 247 AYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMPCLMLR 322 (614)
Q Consensus 247 ~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp~~IvR 322 (614)
..+..... ....|+.||+.-..+.+..+. +|+++..+-
T Consensus 140 ~~~~~g~~--------------------------------------~~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~ 181 (247)
T 4hp8_A 140 LLSFQGGI--------------------------------------RVPSYTAAKHGVAGLTKLLANEWAAKGINVNAIA 181 (247)
T ss_dssp GGGTSCCS--------------------------------------SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEE
T ss_pred hhhCCCCC--------------------------------------CChHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEe
Confidence 87633210 014799999977777665443 799999999
Q ss_pred cceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEeccC
Q psy6053 323 PSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLTSS 402 (614)
Q Consensus 323 p~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~~~ 402 (614)
||.|-.+..+. ..........+.... |. --+-..+|+|++++.++..... -..++++.+.+|
T Consensus 182 PG~i~T~~~~~-------~~~~~~~~~~~~~~~----Pl-----gR~g~peeiA~~v~fLaSd~a~--~iTG~~i~VDGG 243 (247)
T 4hp8_A 182 PGYIETNNTEA-------LRADAARNKAILERI----PA-----GRWGHSEDIAGAAVFLSSAAAD--YVHGAILNVDGG 243 (247)
T ss_dssp ECSBCSGGGHH-------HHTSHHHHHHHHTTC----TT-----SSCBCTHHHHHHHHHHTSGGGT--TCCSCEEEESTT
T ss_pred eCCCCCcchhh-------cccCHHHHHHHHhCC----CC-----CCCcCHHHHHHHHHHHhCchhc--CCcCCeEEECcc
Confidence 99885432110 000011111122211 00 0123458999999888755432 136778887765
No 298
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=99.45 E-value=3.6e-12 Score=127.77 Aligned_cols=223 Identities=13% Similarity=0.040 Sum_probs=148.1
Q ss_pred cCCcEEEEecccc--cccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeC
Q psy6053 100 FTGKTLFMTGASG--FLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISG 177 (614)
Q Consensus 100 ~~~~~VLITGaTG--FlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~g 177 (614)
++||+++||||+| -||+.+++.|++.|.+ |++..|+... .+.+.+.++. . ...++.++.+
T Consensus 4 l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~---Vvi~~r~~~~---~~~~~~~~~~---------~---~~~~~~~~~~ 65 (256)
T 4fs3_A 4 LENKTYVIMGIANKRSIAFGVAKVLDQLGAK---LVFTYRKERS---RKELEKLLEQ---------L---NQPEAHLYQI 65 (256)
T ss_dssp CTTCEEEEECCCSTTCHHHHHHHHHHHTTCE---EEEEESSGGG---HHHHHHHHGG---------G---TCSSCEEEEC
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHHCCCE---EEEEECCHHH---HHHHHHHHHh---------c---CCCcEEEEEc
Confidence 5799999999987 7999999999999976 8888887433 2333333221 1 2246889999
Q ss_pred CCCCCCCCCCHHHHHHHhc-------cccEEEEcccccCh-----------hHHHHHHHHHhHHHHHHHHHHHHHc-CCC
Q psy6053 178 DAEADELAIKESDRQLLAS-------EVDIMIHGAATIRF-----------DEALKKAVLLNTRGTKMMLSLAKEM-KHL 238 (614)
Q Consensus 178 Dl~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~-----------~~~~~~~~~~Nv~gt~~ll~la~~~-~~~ 238 (614)
|+++++ +.+.+++ ++|++||+||.... .+.+...+++|+.++..+.+.+... ++-
T Consensus 66 Dv~~~~------~v~~~~~~~~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~ 139 (256)
T 4fs3_A 66 DVQSDE------EVINGFEQIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEG 139 (256)
T ss_dssp CTTCHH------HHHHHHHHHHHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTC
T ss_pred cCCCHH------HHHHHHHHHHHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 999865 6655543 68999999996432 2345667889999998888877653 233
Q ss_pred ceEEEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----C
Q psy6053 239 ELFVHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----N 314 (614)
Q Consensus 239 k~~V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~ 314 (614)
.++|++||..+.... | ....|+.||+.-+.+.+..+. +
T Consensus 140 G~IVnisS~~~~~~~----------~----------------------------~~~~Y~asKaal~~ltr~lA~Ela~~ 181 (256)
T 4fs3_A 140 GSIVATTYLGGEFAV----------Q----------------------------NYNVMGVAKASLEANVKYLALDLGPD 181 (256)
T ss_dssp EEEEEEECGGGTSCC----------T----------------------------TTHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred CEEEEEeccccccCc----------c----------------------------cchhhHHHHHHHHHHHHHHHHHhCcc
Confidence 589999998653221 0 014799999987777665543 6
Q ss_pred CCCEEEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCc
Q psy6053 315 GMPCLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQ 394 (614)
Q Consensus 315 glp~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~ 394 (614)
|+++..+.||.|-.+..+ ...........+.... |- . -+...+|+|++++.++..... -..+
T Consensus 182 gIrVN~V~PG~i~T~~~~-------~~~~~~~~~~~~~~~~----Pl---~--R~g~peevA~~v~fL~Sd~a~--~iTG 243 (256)
T 4fs3_A 182 NIRVNAISAGPIRTLSAK-------GVGGFNTILKEIKERA----PL---K--RNVDQVEVGKTAAYLLSDLSS--GVTG 243 (256)
T ss_dssp TEEEEEEEECCCCSGGGT-------TCTTHHHHHHHHHHHS----TT---S--SCCCHHHHHHHHHHHHSGGGT--TCCS
T ss_pred CeEEEEEecCCCCChhhh-------hccCCHHHHHHHHhcC----CC---C--CCcCHHHHHHHHHHHhCchhc--CccC
Confidence 999999999988554322 1122222332222211 00 0 134568999999888854332 1367
Q ss_pred cEEEeccC
Q psy6053 395 SIVHLTSS 402 (614)
Q Consensus 395 ~vyni~~~ 402 (614)
+++.+.+|
T Consensus 244 ~~i~VDGG 251 (256)
T 4fs3_A 244 ENIHVDSG 251 (256)
T ss_dssp CEEEESTT
T ss_pred CEEEECcC
Confidence 78887766
No 299
>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*
Probab=99.38 E-value=1.3e-11 Score=126.19 Aligned_cols=240 Identities=12% Similarity=0.039 Sum_probs=139.0
Q ss_pred cCCcEEEEeccc--ccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccc-cCeEEEEe
Q psy6053 100 FTGKTLFMTGAS--GFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKI-IDKVLPIS 176 (614)
Q Consensus 100 ~~~~~VLITGaT--GFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~-~~~v~~v~ 176 (614)
+++|+++||||+ |+||++++++|++.|.+ |+++.|.... .+..+-.+..-.+.+. +..... ......+.
T Consensus 6 l~~k~~lVTGas~~~GIG~aia~~la~~G~~---V~~~~r~~~~----~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 77 (297)
T 1d7o_A 6 LRGKRAFIAGIADDNGYGWAVAKSLAAAGAE---ILVGTWVPAL----NIFETSLRRGKFDQSR-VLPDGSLMEIKKVYP 77 (297)
T ss_dssp CTTCEEEEECCSSSSSHHHHHHHHHHHTTCE---EEEEEEHHHH----HHHHHHHHTTTTTGGG-BCTTSSBCCEEEEEE
T ss_pred cCCCEEEEECCCCCCChHHHHHHHHHHCCCe---EEEeeccccc----hhhhhhhhhhHhhhhh-hhccccccccccccc
Confidence 568999999999 99999999999999876 7888764210 0000000000000010 000000 01123334
Q ss_pred CCCCCC---CCCC-----------CHHHHHHHh-------ccccEEEEcccccC-----h----hHHHHHHHHHhHHHHH
Q psy6053 177 GDAEAD---ELAI-----------KESDRQLLA-------SEVDIMIHGAATIR-----F----DEALKKAVLLNTRGTK 226 (614)
Q Consensus 177 gDl~~~---~lGL-----------s~~~~~~l~-------~~vd~ViH~AA~v~-----~----~~~~~~~~~~Nv~gt~ 226 (614)
+|+.-. ++.. ++++.+.++ .++|++||+||... + .+.++..+++|+.|+.
T Consensus 78 ~~~~~~~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~ 157 (297)
T 1d7o_A 78 LDAVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFV 157 (297)
T ss_dssp ECTTCCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHH
T ss_pred cceeccchhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHH
Confidence 443100 0000 001233333 36899999998521 1 3457788999999999
Q ss_pred HHHHHHHHc-CCCceEEEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHH
Q psy6053 227 MMLSLAKEM-KHLELFVHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSE 305 (614)
Q Consensus 227 ~ll~la~~~-~~~k~~V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE 305 (614)
++++.+... ..-.++|++||..+.... | .+...|+.||+..+
T Consensus 158 ~l~~~~~~~m~~~g~iv~isS~~~~~~~----------~---------------------------~~~~~Y~asKaa~~ 200 (297)
T 1d7o_A 158 SLLSHFLPIMNPGGASISLTYIASERII----------P---------------------------GYGGGMSSAKAALE 200 (297)
T ss_dssp HHHHHHGGGEEEEEEEEEEECGGGTSCC----------T---------------------------TCTTTHHHHHHHHH
T ss_pred HHHHHHHHHhccCceEEEEeccccccCC----------C---------------------------CcchHHHHHHHHHH
Confidence 999999763 112589999998653211 0 00137999999888
Q ss_pred HHHHHHhh-----CCCCEEEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHH
Q psy6053 306 GLVVEAMN-----NGMPCLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIF 380 (614)
Q Consensus 306 ~lv~~~~~-----~glp~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii 380 (614)
.+.+..+. +|+++..++||.|.++..... .....+........ + ...+...+|+|++++
T Consensus 201 ~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~~~-------~~~~~~~~~~~~~~-------p--~~r~~~pedvA~~v~ 264 (297)
T 1d7o_A 201 SDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAI-------GFIDTMIEYSYNNA-------P--IQKTLTADEVGNAAA 264 (297)
T ss_dssp HHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCC-------SHHHHHHHHHHHHS-------S--SCCCBCHHHHHHHHH
T ss_pred HHHHHHHHHhCcccCcEEEEEeccccccchhhhc-------cccHHHHHHhhccC-------C--CCCCCCHHHHHHHHH
Confidence 87765432 389999999999977643211 11111211111111 0 012457899999998
Q ss_pred HHHHhhhhcCCCCccEEEeccC
Q psy6053 381 VAIWAYLSQKEHRQSIVHLTSS 402 (614)
Q Consensus 381 ~~~~~~~~~~~~~~~vyni~~~ 402 (614)
.++..... ...+.++++.++
T Consensus 265 ~l~s~~~~--~itG~~i~vdgG 284 (297)
T 1d7o_A 265 FLVSPLAS--AITGATIYVDNG 284 (297)
T ss_dssp HHTSGGGT--TCCSCEEEESTT
T ss_pred HHhCcccc--CCCCCEEEECCC
Confidence 88754321 135788998877
No 300
>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*
Probab=99.37 E-value=2.8e-12 Score=128.75 Aligned_cols=220 Identities=15% Similarity=0.148 Sum_probs=141.7
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
++||++|||||++.||+.+++.|++.|.+ |++..|.+... ..+...+.+|+
T Consensus 9 L~GK~alVTGas~GIG~aia~~la~~Ga~---V~~~~r~~~~~--------------------------~~~~~~~~~Dv 59 (261)
T 4h15_A 9 LRGKRALITAGTKGAGAATVSLFLELGAQ---VLTTARARPEG--------------------------LPEELFVEADL 59 (261)
T ss_dssp CTTCEEEESCCSSHHHHHHHHHHHHTTCE---EEEEESSCCTT--------------------------SCTTTEEECCT
T ss_pred CCCCEEEEeccCcHHHHHHHHHHHHcCCE---EEEEECCchhC--------------------------CCcEEEEEcCC
Confidence 57999999999999999999999999976 88888875321 12234688999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcccccC-----h----hHHHHHHHHHhHHHHHHHHHHHHHc---CCCce
Q psy6053 180 EADELAIKESDRQLLAS-------EVDIMIHGAATIR-----F----DEALKKAVLLNTRGTKMMLSLAKEM---KHLEL 240 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~-----~----~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~ 240 (614)
++++ +.+.+++ ++|++||+||... + .+.++..+++|+.|+..+.+.+... .+-.+
T Consensus 60 ~~~~------~v~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~ 133 (261)
T 4h15_A 60 TTKE------GCAIVAEATRQRLGGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGV 133 (261)
T ss_dssp TSHH------HHHHHHHHHHHHTSSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCce
Confidence 9876 5555543 5899999998532 2 3567889999999998888766531 24468
Q ss_pred EEEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCC
Q psy6053 241 FVHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGM 316 (614)
Q Consensus 241 ~V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~gl 316 (614)
+|++||..+.... |. ....|+.||+..+.+.+..+. +|+
T Consensus 134 Iv~isS~~~~~~~----------~~---------------------------~~~~Y~asKaal~~lt~~lA~Ela~~gI 176 (261)
T 4h15_A 134 VVHVTSIQRVLPL----------PE---------------------------STTAYAAAKAALSTYSKAMSKEVSPKGV 176 (261)
T ss_dssp EEEECCGGGTSCC----------TT---------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTE
T ss_pred EEEEEehhhccCC----------CC---------------------------ccHHHHHHHHHHHHHHHHHHHHhhhhCe
Confidence 9999998653211 00 014699999987777665544 799
Q ss_pred CEEEeecceeecccCCCCcccc-C----CCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCC
Q psy6053 317 PCLMLRPSIIIPVWREPLPGWT-D----NINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKE 391 (614)
Q Consensus 317 p~~IvRp~~I~g~~~~p~~gw~-d----~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~ 391 (614)
++..+.||.|-.+......... . ................ | .--+...+|+|++++.++..... -
T Consensus 177 rVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----P-----lgR~g~peevA~~v~fLaS~~a~--~ 245 (261)
T 4h15_A 177 RVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIMDGLGGI----P-----LGRPAKPEEVANLIAFLASDRAA--S 245 (261)
T ss_dssp EEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCC----T-----TSSCBCHHHHHHHHHHHHSGGGT--T
T ss_pred EEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHHHHHHhcCC----C-----CCCCcCHHHHHHHHHHHhCchhc--C
Confidence 9999999988433110000000 0 0000001111111110 0 00134568999999888754332 1
Q ss_pred CCccEEEeccC
Q psy6053 392 HRQSIVHLTSS 402 (614)
Q Consensus 392 ~~~~vyni~~~ 402 (614)
..++++++.+|
T Consensus 246 itG~~i~VDGG 256 (261)
T 4h15_A 246 ITGAEYTIDGG 256 (261)
T ss_dssp CCSCEEEESTT
T ss_pred ccCcEEEECCc
Confidence 36788888766
No 301
>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}
Probab=99.37 E-value=1.8e-12 Score=145.81 Aligned_cols=210 Identities=14% Similarity=0.102 Sum_probs=133.3
Q ss_pred cccCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccC-------CCcCHHHHHHHHHhChhhHHhhhhccccccC
Q psy6053 98 ETFTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQK-------KGKNARQRIEELFASPLFNLLKSVHGQKIID 170 (614)
Q Consensus 98 ~~~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~-------~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~ 170 (614)
.-++||+++||||+|+||++++++|++.|.. |+++.|.. +....++-.+++ +. ...
T Consensus 15 ~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~---Vv~~~r~~~~~~~~~~~~~~~~~~~~i---------~~-----~~~ 77 (613)
T 3oml_A 15 LRYDGRVAVVTGAGAGLGREYALLFAERGAK---VVVNDLGGTHSGDGASQRAADIVVDEI---------RK-----AGG 77 (613)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTTCE---EEEC--------------CHHHHHHHH---------HH-----TTC
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEeCCcccccccCCHHHHHHHHHHH---------HH-----hCC
Confidence 3478999999999999999999999999865 78877722 111111111111 11 111
Q ss_pred eEEEEeCCCCCCCCCCCHHHHHHHhc-------cccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHHc-
Q psy6053 171 KVLPISGDAEADELAIKESDRQLLAS-------EVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKEM- 235 (614)
Q Consensus 171 ~v~~v~gDl~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~- 235 (614)
. +.+|+++.. +.+.+++ .+|++||+||.... .+.++..+++|+.|+.++++++...
T Consensus 78 ~---~~~D~~d~~------~~~~~~~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m 148 (613)
T 3oml_A 78 E---AVADYNSVI------DGAKVIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYM 148 (613)
T ss_dssp C---EEECCCCGG------GHHHHHC----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred e---EEEEeCCHH------HHHHHHHHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 236888765 5555554 58999999997532 3567889999999999999988331
Q ss_pred --CCCceEEEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh
Q psy6053 236 --KHLELFVHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN 313 (614)
Q Consensus 236 --~~~k~~V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~ 313 (614)
.+..++|++||..+..... ....|+.||+..+.+.+..+.
T Consensus 149 ~~~~~g~IV~isS~a~~~~~~--------------------------------------~~~~Y~asKaal~~lt~~la~ 190 (613)
T 3oml_A 149 KKQNYGRIIMTSSNSGIYGNF--------------------------------------GQVNYTAAKMGLIGLANTVAI 190 (613)
T ss_dssp HTTTCEEEEEECCHHHHHCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHH
T ss_pred HHcCCCEEEEECCHHHcCCCC--------------------------------------CChHHHHHHHHHHHHHHHHHH
Confidence 3457899999986532110 014799999998888876654
Q ss_pred ----CCCCEEEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhc
Q psy6053 314 ----NGMPCLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQ 389 (614)
Q Consensus 314 ----~glp~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~ 389 (614)
.|+.+..+.||.+..... .... .........+++|++++.++....
T Consensus 191 e~~~~gI~vn~v~Pg~~t~~~~--------~~~~--------------------~~~~~~~~pedvA~~v~~L~s~~~-- 240 (613)
T 3oml_A 191 EGARNNVLCNVIVPTAASRMTE--------GILP--------------------DILFNELKPKLIAPVVAYLCHESC-- 240 (613)
T ss_dssp HHGGGTEEEEEEEEC------C--------CCCC--------------------HHHHTTCCGGGTHHHHHHTTSTTC--
T ss_pred HhCccCeEEEEEECCCCChhhh--------hccc--------------------hhhhhcCCHHHHHHHHHHhcCCCc--
Confidence 589999999986532111 0000 111233477899999888775542
Q ss_pred CCCCccEEEeccC
Q psy6053 390 KEHRQSIVHLTSS 402 (614)
Q Consensus 390 ~~~~~~vyni~~~ 402 (614)
...+.++++.++
T Consensus 241 -~~tG~~i~vdGG 252 (613)
T 3oml_A 241 -EDNGSYIESAAG 252 (613)
T ss_dssp -CCCSCEEEEETT
T ss_pred -CCCceEEEECCC
Confidence 236778888766
No 302
>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}
Probab=99.23 E-value=8.2e-11 Score=121.67 Aligned_cols=248 Identities=13% Similarity=0.029 Sum_probs=120.9
Q ss_pred cCCcEEEEecc--cccccHHHHHHHHhhCCCccEEEEEEccC------CCcCHHHHHHHHH--hC----hhhHHhhhhcc
Q psy6053 100 FTGKTLFMTGA--SGFLGKVLLEKILRKSPNVKKIYILMRQK------KGKNARQRIEELF--AS----PLFNLLKSVHG 165 (614)
Q Consensus 100 ~~~~~VLITGa--TGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~------~~~~~~~Rl~~~~--~~----~~f~~l~~~~p 165 (614)
+++|+++|||| +|+||++++++|++.|.+ |+++.|+. ... ..+++++.. .. ..-+.++....
T Consensus 7 l~~k~~lVTGa~~s~GIG~aia~~la~~G~~---Vv~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (319)
T 2ptg_A 7 LRGKTAFVAGVADSNGYGWAICKLLRAAGAR---VLVGTWPPVYSIFKKGL-ESSRFEQDSFYAQEPSSKVAAEAAEKPV 82 (319)
T ss_dssp CTTCEEEEECCCCTTSHHHHHHHHHHHTTCE---EEEEECHHHHHHHHC-------------------------------
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHHCCCE---EEEEeccccccchhhhh-hhhhhhhhhhhhcchhhhHHHHhhhccc
Confidence 56899999999 899999999999999875 78887642 000 001111100 00 00001110000
Q ss_pred ccccCeEEEEeCCC--CCCC-CCC-----------CHHHHHHHh-------ccccEEEEcccccC-----h----hHHHH
Q psy6053 166 QKIIDKVLPISGDA--EADE-LAI-----------KESDRQLLA-------SEVDIMIHGAATIR-----F----DEALK 215 (614)
Q Consensus 166 ~~~~~~v~~v~gDl--~~~~-lGL-----------s~~~~~~l~-------~~vd~ViH~AA~v~-----~----~~~~~ 215 (614)
......++.+|+ +++. +-. +.++++.++ .++|++||+||... + .+.++
T Consensus 83 --~~~~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~ 160 (319)
T 2ptg_A 83 --DLVFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYL 160 (319)
T ss_dssp ----CCSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHH
T ss_pred --cccccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHH
Confidence 000123444443 2221 000 001233333 36899999998531 1 34577
Q ss_pred HHHHHhHHHHHHHHHHHHHc-CCCceEEEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCC
Q psy6053 216 KAVLLNTRGTKMMLSLAKEM-KHLELFVHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFP 294 (614)
Q Consensus 216 ~~~~~Nv~gt~~ll~la~~~-~~~k~~V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~p 294 (614)
..+++|+.|+.++++.+... ..-.++|++||..+.... | .+.
T Consensus 161 ~~~~vN~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~----------~---------------------------~~~ 203 (319)
T 2ptg_A 161 AAVSSSSYSFVSLLQHFLPLMKEGGSALALSYIASEKVI----------P---------------------------GYG 203 (319)
T ss_dssp HHHHHHTHHHHHHHHHHGGGEEEEEEEEEEEECC----------------------------------------------
T ss_pred HHHhHhhHHHHHHHHHHHHHHhcCceEEEEecccccccc----------C---------------------------ccc
Confidence 88999999999999998762 112589999998653211 0 001
Q ss_pred CchhhhHHHHHHHHHHHhh-----CCCCEEEeecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccc
Q psy6053 295 NSYAYTKCLSEGLVVEAMN-----NGMPCLMLRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADF 369 (614)
Q Consensus 295 n~Y~~SK~~aE~lv~~~~~-----~glp~~IvRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~ 369 (614)
..|+.||+..+.+.+..+. +|+.+..++||.|-.+.....+. . ....+...... .. .......-+
T Consensus 204 ~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~~~---~--~~~~~~~~~~~-~~----~~~~p~~r~ 273 (319)
T 2ptg_A 204 GGMSSAKAALESDCRTLAFEAGRARAVRVNCISAGPLKSRAASAIGK---A--GDKTFIDLAID-YS----EANAPLQKE 273 (319)
T ss_dssp ---------THHHHHHHHHHHHHHHCCEEEEEEECCCC-----------------------------------------C
T ss_pred hhhHHHHHHHHHHHHHHHHHhccccCeeEEEEeeCCccChhhhhccc---c--cchhhHHHHHH-HH----hccCCCCCC
Confidence 3699999877777654432 48999999999886543211000 0 00000000000 00 000001124
Q ss_pred eeHHHHHHHHHHHHHhhhhcCCCCccEEEeccC
Q psy6053 370 LPVDITINGIFVAIWAYLSQKEHRQSIVHLTSS 402 (614)
Q Consensus 370 vpVDdva~aii~~~~~~~~~~~~~~~vyni~~~ 402 (614)
...+++|++++.++..... -..+.++.+.++
T Consensus 274 ~~peevA~~v~~L~s~~~~--~itG~~i~vdGG 304 (319)
T 2ptg_A 274 LESDDVGRAALFLLSPLAR--AVTGATLYVDNG 304 (319)
T ss_dssp CCHHHHHHHHHHHTSGGGT--TCCSCEEEESTT
T ss_pred CCHHHHHHHHHHHhCcccC--CccCCEEEECCC
Confidence 5789999999988764331 236778888776
No 303
>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*
Probab=99.19 E-value=5.8e-10 Score=135.39 Aligned_cols=168 Identities=15% Similarity=0.146 Sum_probs=117.5
Q ss_pred cCCcEEEEeccccc-ccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCC
Q psy6053 100 FTGKTLFMTGASGF-LGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGD 178 (614)
Q Consensus 100 ~~~~~VLITGaTGF-lG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gD 178 (614)
++||+||||||+|. ||.++++.|++.|.+ |+++.|.... ...+-.+++ ..+... ...++.++.+|
T Consensus 650 L~gKvaLVTGASgGgIG~aIAr~LA~~GA~---VVl~~~R~~~-~l~~~a~eL---------~~el~~-~G~~v~~v~~D 715 (1878)
T 2uv9_A 650 FQGKHALMTGAGAGSIGAEVLQGLLSGGAK---VIVTTSRFSR-QVTEYYQGI---------YARCGA-RGSQLVVVPFN 715 (1878)
T ss_dssp CTTCEEEEESCCTTSHHHHHHHHHHHTTCE---EEEEESSCCH-HHHHHHHHH---------HHHHCC-TTCEEEEEECC
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHHCCCE---EEEEecCChH-HHHHHHHHH---------HHHhhc-cCCeEEEEEcC
Confidence 57899999999999 999999999999865 7777543221 111111111 111111 23578999999
Q ss_pred CCCCCCCCCHHHHHHHhc-----------cccEEEEcccccCh----------hHHHHHHHHHhHHHHHHHHHHHHHcCC
Q psy6053 179 AEADELAIKESDRQLLAS-----------EVDIMIHGAATIRF----------DEALKKAVLLNTRGTKMMLSLAKEMKH 237 (614)
Q Consensus 179 l~~~~lGLs~~~~~~l~~-----------~vd~ViH~AA~v~~----------~~~~~~~~~~Nv~gt~~ll~la~~~~~ 237 (614)
+++++ +++.+++ .+|++||+||.... .+.+...+++|+.|+.+++++++..+.
T Consensus 716 Vsd~e------sV~alv~~i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~ 789 (1878)
T 2uv9_A 716 QGSKQ------DVEALVNYIYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERG 789 (1878)
T ss_dssp TTCHH------HHHHHHHHHHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred CCCHH------HHHHHHHHHHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 99866 6666553 48999999996532 256778899999999999887543222
Q ss_pred -----CceEEEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHh
Q psy6053 238 -----LELFVHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAM 312 (614)
Q Consensus 238 -----~k~~V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~ 312 (614)
..+||++||..+.... ...|+.||+..+.+.....
T Consensus 790 M~~~~~G~IVnISS~ag~~gg----------------------------------------~~aYaASKAAL~aLt~~la 829 (1878)
T 2uv9_A 790 YETRPAQVILPLSPNHGTFGN----------------------------------------DGLYSESKLALETLFNRWY 829 (1878)
T ss_dssp CCSCCEEECCEECSCSSSSSC----------------------------------------CSSHHHHHHHHTTHHHHHH
T ss_pred HHhCCCCEEEEEcchhhccCC----------------------------------------chHHHHHHHHHHHHHHHHH
Confidence 2589999998653210 1579999999998876433
Q ss_pred h----CCCCEEEeecceee
Q psy6053 313 N----NGMPCLMLRPSIII 327 (614)
Q Consensus 313 ~----~glp~~IvRp~~I~ 327 (614)
. .+++++.+.||.|-
T Consensus 830 AeEla~~IrVNaVaPG~V~ 848 (1878)
T 2uv9_A 830 SESWGNYLTICGAVIGWTR 848 (1878)
T ss_dssp HSTTTTTEEEEEEEECCBC
T ss_pred HHHcCCCeEEEEEEeccee
Confidence 2 24888899998775
No 304
>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*
Probab=99.18 E-value=5.7e-11 Score=122.67 Aligned_cols=245 Identities=11% Similarity=0.030 Sum_probs=136.1
Q ss_pred cCCcEEEEecc--cccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhh-ccccccCeEEEEe
Q psy6053 100 FTGKTLFMTGA--SGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSV-HGQKIIDKVLPIS 176 (614)
Q Consensus 100 ~~~~~VLITGa--TGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~-~p~~~~~~v~~v~ 176 (614)
+++|+++|||| ||+||++++++|++.|.+ |+++.|... ..|..+..+..-.+.+.+. ... ....+.++.
T Consensus 7 l~gk~~lVTGa~~s~GIG~aia~~la~~G~~---Vv~~~r~~~----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 78 (315)
T 2o2s_A 7 LRGQTAFVAGVADSHGYGWAIAKHLASAGAR---VALGTWPPV----LGLFQKSLQSGRLDEDRKLPDGS-LIEFAGVYP 78 (315)
T ss_dssp CTTCEEEEECCSSSSSHHHHHHHHHHTTTCE---EEEEECHHH----HHHHHHHHHHTTTHHHHBCTTSC-BCCCSCEEE
T ss_pred CCCCEEEEeCCCCCCChHHHHHHHHHHCCCE---EEEEecccc----cchhhhhhhhhhhhhhhhhhccc-ccccccccc
Confidence 57899999999 899999999999999875 888877521 0111000000000001000 000 001123344
Q ss_pred CCC--CCCC-CCC-----------CHHHHHHHh-------ccccEEEEcccccC-----h----hHHHHHHHHHhHHHHH
Q psy6053 177 GDA--EADE-LAI-----------KESDRQLLA-------SEVDIMIHGAATIR-----F----DEALKKAVLLNTRGTK 226 (614)
Q Consensus 177 gDl--~~~~-lGL-----------s~~~~~~l~-------~~vd~ViH~AA~v~-----~----~~~~~~~~~~Nv~gt~ 226 (614)
+|+ +++. +.. +.++++.++ .++|++||+||... + .+.++..+++|+.|+.
T Consensus 79 ~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~ 158 (315)
T 2o2s_A 79 LDAAFDKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFV 158 (315)
T ss_dssp CCTTCSSTTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHH
T ss_pred ccccccccchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHH
Confidence 443 2211 000 011333333 36899999998531 1 3557788999999999
Q ss_pred HHHHHHHHc-CCCceEEEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHH
Q psy6053 227 MMLSLAKEM-KHLELFVHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSE 305 (614)
Q Consensus 227 ~ll~la~~~-~~~k~~V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE 305 (614)
++++.+... ..-.++|++||..+.... | .+...|+.||+..+
T Consensus 159 ~l~~~~~~~m~~~g~Iv~isS~~~~~~~----------~---------------------------~~~~~Y~asKaal~ 201 (315)
T 2o2s_A 159 SLLQHFGPIMNEGGSAVTLSYLAAERVV----------P---------------------------GYGGGMSSAKAALE 201 (315)
T ss_dssp HHHHHHSTTEEEEEEEEEEEEGGGTSCC----------T---------------------------TCCTTHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCEEEEEecccccccC----------C---------------------------CccHHHHHHHHHHH
Confidence 999998752 112589999998653211 0 01137999999888
Q ss_pred HHHHHHhh-----CCCCEEEeecceeecccCCCCccccCCCCch-HHHHHHHhcCceeeEeeCCCccccceeHHHHHHHH
Q psy6053 306 GLVVEAMN-----NGMPCLMLRPSIIIPVWREPLPGWTDNINGP-TGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGI 379 (614)
Q Consensus 306 ~lv~~~~~-----~glp~~IvRp~~I~g~~~~p~~gw~d~~~g~-~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~ai 379 (614)
.+.+..+. +|+.+..++||.|-.+....... ...... ........... + ..-+...+++|+++
T Consensus 202 ~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~~~--~~~~~~~~~~~~~~~~~~-------p--~~r~~~pedvA~~v 270 (315)
T 2o2s_A 202 SDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAIGK--SGEKSFIDYAIDYSYNNA-------P--LRRDLHSDDVGGAA 270 (315)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEEECCCCCHHHHHTTC--SSSSCHHHHHHHHHHHHS-------S--SCCCCCHHHHHHHH
T ss_pred HHHHHHHHHhCcccCeEEEEEecccccchhhhhccc--cccchhHHHHHHHHhccC-------C--CCCCCCHHHHHHHH
Confidence 77765432 48999999999885432110000 000000 00100010000 0 01245789999999
Q ss_pred HHHHHhhhhcCCCCccEEEeccC
Q psy6053 380 FVAIWAYLSQKEHRQSIVHLTSS 402 (614)
Q Consensus 380 i~~~~~~~~~~~~~~~vyni~~~ 402 (614)
+.++..... -..+.++.+.++
T Consensus 271 ~~L~s~~~~--~itG~~i~vdGG 291 (315)
T 2o2s_A 271 LFLLSPLAR--AVSGVTLYVDNG 291 (315)
T ss_dssp HHHTSGGGT--TCCSCEEEESTT
T ss_pred HHHhCchhc--cCcCCEEEECCC
Confidence 988764321 136778888776
No 305
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}
Probab=99.18 E-value=7.2e-11 Score=136.39 Aligned_cols=166 Identities=17% Similarity=0.221 Sum_probs=126.9
Q ss_pred ccCCcEEEEecccccccHHHHHHHH-hhCCCccEEEEEEccCCCc-CHHHHHHHHHhChhhHHhhhhccccccCeEEEEe
Q psy6053 99 TFTGKTLFMTGASGFLGKVLLEKIL-RKSPNVKKIYILMRQKKGK-NARQRIEELFASPLFNLLKSVHGQKIIDKVLPIS 176 (614)
Q Consensus 99 ~~~~~~VLITGaTGFlG~~Ll~~Ll-~~g~~v~~V~~LvR~~~~~-~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~ 176 (614)
+-.+++++||||+|.||..+++.|. +.|.. +|+++.|+.... ..++-++++.. ...++.++.
T Consensus 527 ~~~~~~~lItGg~~GlG~aiA~~la~~~Ga~--~vvl~~R~~~~~~~~~~~~~~l~~--------------~G~~v~~~~ 590 (795)
T 3slk_A 527 WDAAGTVLVTGGTGALGAEVARHLVIERGVR--NLVLVSRRGPAASGAAELVAQLTA--------------YGAEVSLQA 590 (795)
T ss_dssp CCTTSEEEEETTTSHHHHHHHHHHHHTSSCC--EEEEEESSGGGSTTHHHHHHHHHH--------------TTCEEEEEE
T ss_pred cccccceeeccCCCCcHHHHHHHHHHHcCCc--EEEEeccCccchHHHHHHHHHHHh--------------cCCcEEEEE
Confidence 4568999999999999999999999 67754 588899974332 23333333311 335799999
Q ss_pred CCCCCCCCCCCHHHHHHHhcc------ccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHHcCCCceEEE
Q psy6053 177 GDAEADELAIKESDRQLLASE------VDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKEMKHLELFVH 243 (614)
Q Consensus 177 gDl~~~~lGLs~~~~~~l~~~------vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~ 243 (614)
+|+++++ +++.+++. +|+|||+|+.... .+.++..+++|+.|+.++.+++. +.+ .||.
T Consensus 591 ~Dvsd~~------~v~~~~~~~~~~~~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~--~~l-~iV~ 661 (795)
T 3slk_A 591 CDVADRE------TLAKVLASIPDEHPLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELID--PDV-ALVL 661 (795)
T ss_dssp CCTTCHH------HHHHHHHTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSC--TTS-EEEE
T ss_pred eecCCHH------HHHHHHHHHHHhCCCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHh--hCC-EEEE
Confidence 9999976 78777753 6999999997532 35678889999999999999883 456 8999
Q ss_pred EeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhhCCCCEEEeec
Q psy6053 244 ISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMNNGMPCLMLRP 323 (614)
Q Consensus 244 vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~~glp~~IvRp 323 (614)
+||..+..... .-..|+.+|...+.+..+....|++++.+-|
T Consensus 662 ~SS~ag~~g~~--------------------------------------g~~~YaAaka~~~alA~~~~~~Gi~v~sI~p 703 (795)
T 3slk_A 662 FSSVSGVLGSG--------------------------------------GQGNYAAANSFLDALAQQRQSRGLPTRSLAW 703 (795)
T ss_dssp EEETHHHHTCS--------------------------------------SCHHHHHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred EccHHhcCCCC--------------------------------------CCHHHHHHHHHHHHHHHHHHHcCCeEEEEEC
Confidence 99986532210 0147999999999988887778999999999
Q ss_pred ceee
Q psy6053 324 SIII 327 (614)
Q Consensus 324 ~~I~ 327 (614)
|.+-
T Consensus 704 G~v~ 707 (795)
T 3slk_A 704 GPWA 707 (795)
T ss_dssp CCCS
T ss_pred CeEC
Confidence 9764
No 306
>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*
Probab=99.10 E-value=6.4e-10 Score=135.32 Aligned_cols=168 Identities=16% Similarity=0.142 Sum_probs=118.7
Q ss_pred cCCcEEEEeccccc-ccHHHHHHHHhhCCCccEEEEEE-ccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeC
Q psy6053 100 FTGKTLFMTGASGF-LGKVLLEKILRKSPNVKKIYILM-RQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISG 177 (614)
Q Consensus 100 ~~~~~VLITGaTGF-lG~~Ll~~Ll~~g~~v~~V~~Lv-R~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~g 177 (614)
++||+++||||+|. ||.++++.|++.|.. |+++. |.... ..+-.++ +..+.+. ...++.++.+
T Consensus 673 l~gKvaLVTGASsGgIG~aIA~~La~~GA~---Vvl~~~R~~~~--l~~~~~e---------L~~~~~~-~g~~v~~v~~ 737 (1887)
T 2uv8_A 673 FKDKYVLITGAGKGSIGAEVLQGLLQGGAK---VVVTTSRFSKQ--VTDYYQS---------IYAKYGA-KGSTLIVVPF 737 (1887)
T ss_dssp CTTCEEEEESCCSSSHHHHHHHHHHHTTCE---EEEEESSCCHH--HHHHHHH---------HHHHHCC-TTCEEEEEEC
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHHCCCE---EEEEecCCHHH--HHHHHHH---------HHHHhhc-CCCeEEEEEe
Confidence 57899999999999 999999999999875 77764 44311 1111111 1122222 2357899999
Q ss_pred CCCCCCCCCCHHHHHHHhc-------------cccEEEEcccccCh----------hHHHHHHHHHhHHHHHHHHHHHHH
Q psy6053 178 DAEADELAIKESDRQLLAS-------------EVDIMIHGAATIRF----------DEALKKAVLLNTRGTKMMLSLAKE 234 (614)
Q Consensus 178 Dl~~~~lGLs~~~~~~l~~-------------~vd~ViH~AA~v~~----------~~~~~~~~~~Nv~gt~~ll~la~~ 234 (614)
|+++++ +++.+++ .+|++||+||.... .+.++..+++|+.|+..+++.++.
T Consensus 738 DVsd~~------sV~alv~~i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~ 811 (1887)
T 2uv8_A 738 NQGSKQ------DVEALIEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKS 811 (1887)
T ss_dssp CTTCHH------HHHHHHHHHHSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred cCCCHH------HHHHHHHHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999876 6665542 48999999996422 245678899999999999998854
Q ss_pred cCCC-----ceEEEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHH-H
Q psy6053 235 MKHL-----ELFVHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGL-V 308 (614)
Q Consensus 235 ~~~~-----k~~V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~l-v 308 (614)
.+.. .++|++||..+.... ...|+.||+..+.+ .
T Consensus 812 lp~m~~~~~G~IVnISS~ag~~gg----------------------------------------~~aYaASKAAL~~Ltt 851 (1887)
T 2uv8_A 812 ARGIETRPAQVILPMSPNHGTFGG----------------------------------------DGMYSESKLSLETLFN 851 (1887)
T ss_dssp TTTCCSCCEEEEEEECSCTTCSSC----------------------------------------BTTHHHHHHHGGGHHH
T ss_pred hhhhhhCCCCEEEEEcChHhccCC----------------------------------------CchHHHHHHHHHHHHH
Confidence 3332 589999998543210 15799999999988 4
Q ss_pred HHHhh---CCCCEEEeecceeec
Q psy6053 309 VEAMN---NGMPCLMLRPSIIIP 328 (614)
Q Consensus 309 ~~~~~---~glp~~IvRp~~I~g 328 (614)
+.... ..+.++.+.||.|-+
T Consensus 852 r~lA~ela~~IrVNaV~PG~V~t 874 (1887)
T 2uv8_A 852 RWHSESWANQLTVCGAIIGWTRG 874 (1887)
T ss_dssp HHHHSSCTTTEEEEEEEECCEEC
T ss_pred HHHHHHhCCCeEEEEEEeccccc
Confidence 43333 238899999998864
No 307
>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Probab=99.10 E-value=1.6e-10 Score=136.16 Aligned_cols=167 Identities=17% Similarity=0.140 Sum_probs=117.2
Q ss_pred cCCcEEEEeccccc-ccHHHHHHHHhhCCCccEEEEE-EccCCCc-CHHHHHHHHHhChhhHHhhhhccccccCeEEEEe
Q psy6053 100 FTGKTLFMTGASGF-LGKVLLEKILRKSPNVKKIYIL-MRQKKGK-NARQRIEELFASPLFNLLKSVHGQKIIDKVLPIS 176 (614)
Q Consensus 100 ~~~~~VLITGaTGF-lG~~Ll~~Ll~~g~~v~~V~~L-vR~~~~~-~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~ 176 (614)
+++|+++||||+|. ||+++++.|++.|.+ |+++ .|..... ...+ + +..+.+. ...++.++.
T Consensus 474 L~GKvALVTGASgGGIGrAIAr~LA~~GA~---VVL~~~R~~e~lee~a~---e---------L~ael~a-~Ga~V~vV~ 537 (1688)
T 2pff_A 474 FKDKYVLITGAGKGSIGAEVLQGLLQGGAK---VVVTTSRFSKQVTDYYQ---S---------IYAKYGA-KGSTLIVVP 537 (1688)
T ss_dssp CCSCCEEECSCSSSSTHHHHHHHHHHHTCE---EEEEESSCSTTTTTHHH---H---------TTTTTCC-TTCEEEEEE
T ss_pred cCCCEEEEECCChHHHHHHHHHHHHHCcCE---EEEEeCCCHHHHHHHHH---H---------HHHHhhc-CCCeEEEEE
Confidence 57899999999998 999999999999875 7766 4543321 1111 1 1111111 235789999
Q ss_pred CCCCCCCCCCCHHHHHHHhc-------------cccEEEEcccccCh----------hHHHHHHHHHhHHHHHHHHHHHH
Q psy6053 177 GDAEADELAIKESDRQLLAS-------------EVDIMIHGAATIRF----------DEALKKAVLLNTRGTKMMLSLAK 233 (614)
Q Consensus 177 gDl~~~~lGLs~~~~~~l~~-------------~vd~ViH~AA~v~~----------~~~~~~~~~~Nv~gt~~ll~la~ 233 (614)
+|+++++ +++.+++ .+|++||+||.... .+.++..+++|+.|+..++++++
T Consensus 538 ~DVTD~e------sVeaLVe~I~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~ 611 (1688)
T 2pff_A 538 FNQGSKQ------DVEALIEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQK 611 (1688)
T ss_dssp CCSSSTT------HHHHHHHHHHSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHH
T ss_pred eCCCCHH------HHHHHHHHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999987 6666542 48999999996422 35567889999999999999884
Q ss_pred HcCC-----CceEEEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHH
Q psy6053 234 EMKH-----LELFVHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLV 308 (614)
Q Consensus 234 ~~~~-----~k~~V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv 308 (614)
..+. -.++|++||..+.... ...|+.||+..+.+.
T Consensus 612 ~lp~M~krggGrIVnISSiAG~~Gg----------------------------------------~saYaASKAAL~aLt 651 (1688)
T 2pff_A 612 SARGIETRPAQVILPMSPNHGTFGG----------------------------------------DGMYSESKLSLETLF 651 (1688)
T ss_dssp HHHTCTTSCEEECCCCCSCTTTSSC----------------------------------------BTTHHHHHHHHTHHH
T ss_pred hChHHHhCCCCEEEEEEChHhccCC----------------------------------------chHHHHHHHHHHHHH
Confidence 3222 2479999998543210 157999999999984
Q ss_pred HHHh-h---CCCCEEEeecceeec
Q psy6053 309 VEAM-N---NGMPCLMLRPSIIIP 328 (614)
Q Consensus 309 ~~~~-~---~glp~~IvRp~~I~g 328 (614)
.+.. . .+++++.+.||.|-+
T Consensus 652 trsLAeEla~~IRVNaVaPG~V~T 675 (1688)
T 2pff_A 652 NRWHSESWANQLTVCGAIIGWTRG 675 (1688)
T ss_dssp HHTTTSSCTTTEECCCCCCCCCCC
T ss_pred HHHHHHHcCCCeEEEEEEECcCcC
Confidence 4432 2 237778888888864
No 308
>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...
Probab=99.09 E-value=6.8e-10 Score=115.31 Aligned_cols=184 Identities=10% Similarity=0.030 Sum_probs=116.3
Q ss_pred CCcEEEEecccc--cccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCC
Q psy6053 101 TGKTLFMTGASG--FLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGD 178 (614)
Q Consensus 101 ~~~~VLITGaTG--FlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gD 178 (614)
++|+++||||++ .||.+++++|++.|.+ |++..|.... ....|-.+..+.. ......... ....+.++.+|
T Consensus 1 ~~k~~lITGas~~~GIG~aiA~~la~~G~~---Vv~~~~~~~~-~l~~r~~~~~~~~--~~~~~~~~~-~~~~~~~~~~D 73 (329)
T 3lt0_A 1 NEDICFIAGIGDTNGYGWGIAKELSKRNVK---IIFGIWPPVY-NIFMKNYKNGKFD--NDMIIDKDK-KMNILDMLPFD 73 (329)
T ss_dssp CCCEEEEECCSSSSSHHHHHHHHHHHTTCE---EEEEECHHHH-HHHHHHHHTTTTT--GGGBCSSSC-BCCEEEEEECC
T ss_pred CCcEEEEECCCCCCchHHHHHHHHHHCCCE---EEEEecCccc-cccccchHHHHHH--HHHHHhhcc-ccccccccccc
Confidence 368999999875 9999999999999876 7766664310 0011111100000 000000011 23457899999
Q ss_pred CCCCCCC-CCHH-------------HHHHHh-------ccccEEEEccccc-----Ch----hHHHHHHHHHhHHHHHHH
Q psy6053 179 AEADELA-IKES-------------DRQLLA-------SEVDIMIHGAATI-----RF----DEALKKAVLLNTRGTKMM 228 (614)
Q Consensus 179 l~~~~lG-Ls~~-------------~~~~l~-------~~vd~ViH~AA~v-----~~----~~~~~~~~~~Nv~gt~~l 228 (614)
+++.... ++++ +++.++ ..+|++||+||.. .+ .+.++..+++|+.|+..+
T Consensus 74 v~~~~~~~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l 153 (329)
T 3lt0_A 74 ASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISL 153 (329)
T ss_dssp TTCSSGGGCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHH
T ss_pred ccccchhhhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHH
Confidence 9987211 1222 333333 3689999999852 11 355778899999999999
Q ss_pred HHHHHHc-CCCceEEEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCC-chhhhHHHHHH
Q psy6053 229 LSLAKEM-KHLELFVHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPN-SYAYTKCLSEG 306 (614)
Q Consensus 229 l~la~~~-~~~k~~V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn-~Y~~SK~~aE~ 306 (614)
.+.+... ..-.++|++||..+.... | ... .|+.||+..+.
T Consensus 154 ~~~~~p~m~~~g~Iv~isS~~~~~~~----------~----------------------------~~~~~Y~asKaal~~ 195 (329)
T 3lt0_A 154 CKYFVNIMKPQSSIISLTYHASQKVV----------P----------------------------GYGGGMSSAKAALES 195 (329)
T ss_dssp HHHHGGGEEEEEEEEEEECGGGTSCC----------T----------------------------TCTTTHHHHHHHHHH
T ss_pred HHHHHHHHhhCCeEEEEeCccccCCC----------C----------------------------cchHHHHHHHHHHHH
Confidence 9988762 111489999998653221 0 013 79999998877
Q ss_pred HHHHHh----h-CCCCEEEeecceeecc
Q psy6053 307 LVVEAM----N-NGMPCLMLRPSIIIPV 329 (614)
Q Consensus 307 lv~~~~----~-~glp~~IvRp~~I~g~ 329 (614)
+.+..+ . +|+.+..+.||.|-.+
T Consensus 196 ~~~~la~el~~~~gI~vn~v~PG~v~T~ 223 (329)
T 3lt0_A 196 DTRVLAYHLGRNYNIRINTISAGPLKSR 223 (329)
T ss_dssp HHHHHHHHHHHHHCCEEEEEEECCCCCH
T ss_pred HHHHHHHHhCCccCeEEEEEecceeech
Confidence 765543 2 3899999999988654
No 309
>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*
Probab=99.00 E-value=7.1e-09 Score=108.72 Aligned_cols=172 Identities=14% Similarity=0.047 Sum_probs=116.4
Q ss_pred cCCcEEEEecccccccHHHHHHHHh-hCCCccEEEEEEccCCCcCH---------HHHHHHHHhChhhHHhhhhcccccc
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILR-KSPNVKKIYILMRQKKGKNA---------RQRIEELFASPLFNLLKSVHGQKII 169 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~-~g~~v~~V~~LvR~~~~~~~---------~~Rl~~~~~~~~f~~l~~~~p~~~~ 169 (614)
-.+|++|||||++-||..+++.|++ .|.+ |++..|....... .+.+.+.. +. ..
T Consensus 45 ~~gKvaLVTGas~GIG~AiA~~LA~g~GA~---Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~--------~~-----~G 108 (405)
T 3zu3_A 45 NGPKRVLVIGASTGYGLAARITAAFGCGAD---TLGVFFERPGEEGKPGTSGWYNSAAFHKFA--------AQ-----KG 108 (405)
T ss_dssp TCCSEEEEESCSSHHHHHHHHHHHHHHCCE---EEEEECCCCCBTTBCCCHHHHHHHHHHHHH--------HH-----TT
T ss_pred CCCCEEEEeCcchHHHHHHHHHHHHhcCCE---EEEEeCCchhhhhhcccccchhHHHHHHHH--------Hh-----cC
Confidence 4579999999999999999999999 9876 7777776543210 11111111 00 23
Q ss_pred CeEEEEeCCCCCCCCCCCHHHHHHHhc-------cccEEEEccccc----------------C-----------------
Q psy6053 170 DKVLPISGDAEADELAIKESDRQLLAS-------EVDIMIHGAATI----------------R----------------- 209 (614)
Q Consensus 170 ~~v~~v~gDl~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v----------------~----------------- 209 (614)
.++..+.+|+++++ +.+.+++ ++|++||+||.. .
T Consensus 109 ~~a~~i~~Dvtd~~------~v~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~ 182 (405)
T 3zu3_A 109 LYAKSINGDAFSDE------IKQLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVI 182 (405)
T ss_dssp CCEEEEESCTTSHH------HHHHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEE
T ss_pred CceEEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEEcCccccccCcccccccccccccccccccccccccccccc
Confidence 46788999999876 5655543 589999999863 0
Q ss_pred --------hhHHHHHHHHHhHHHHH-HHHHHHHHcC---CCceEEEEeCceeccCCcccccccCCCCCChhHHHHHHhhc
Q psy6053 210 --------FDEALKKAVLLNTRGTK-MMLSLAKEMK---HLELFVHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMM 277 (614)
Q Consensus 210 --------~~~~~~~~~~~Nv~gt~-~ll~la~~~~---~~k~~V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~ 277 (614)
-.+.++..+++|..++. .+++.+.... +-.++|.+||..+..... .
T Consensus 183 ~~~~i~~~t~ee~~~~v~Vn~~~~~~~~~~~~~~~~m~~~gG~IVniSSi~~~~~~p----------~------------ 240 (405)
T 3zu3_A 183 KESVLQPATQSEIDSTVAVMGGEDWQMWIDALLDAGVLAEGAQTTAFTYLGEKITHD----------I------------ 240 (405)
T ss_dssp EEEEECCCCHHHHHHHHHHHSSHHHHHHHHHHHHHTCEEEEEEEEEEECCCCGGGTT----------T------------
T ss_pred ccccCCCCCHHHHHHHHHhhchhHHHHHHHHHHHHhhhhCCcEEEEEeCchhhCcCC----------C------------
Confidence 13456777888888776 5555544311 114799999986532110 0
Q ss_pred chhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----C-CCCEEEeecceeecc
Q psy6053 278 SEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----N-GMPCLMLRPSIIIPV 329 (614)
Q Consensus 278 ~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~-glp~~IvRp~~I~g~ 329 (614)
.+...|+.||..-+.+.+..+. . |+++..+-||.|-.+
T Consensus 241 --------------~~~~aY~AaKaal~~ltrsLA~Ela~~~GIRVNaVaPG~i~T~ 283 (405)
T 3zu3_A 241 --------------YWNGSIGAAKKDLDQKVLAIRESLAAHGGGDARVSVLKAVVSQ 283 (405)
T ss_dssp --------------TTTSHHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEECCCCCCH
T ss_pred --------------ccchHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEEeCCCcCc
Confidence 0115799999988887776554 6 899999999987544
No 310
>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}
Probab=98.93 E-value=1e-08 Score=108.40 Aligned_cols=171 Identities=12% Similarity=0.036 Sum_probs=113.2
Q ss_pred CCcEEEEecccccccHHHHHHHHh-hCCCccEEEEEEccCCCcCH---------HHHHHHHHhChhhHHhhhhccccccC
Q psy6053 101 TGKTLFMTGASGFLGKVLLEKILR-KSPNVKKIYILMRQKKGKNA---------RQRIEELFASPLFNLLKSVHGQKIID 170 (614)
Q Consensus 101 ~~~~VLITGaTGFlG~~Ll~~Ll~-~g~~v~~V~~LvR~~~~~~~---------~~Rl~~~~~~~~f~~l~~~~p~~~~~ 170 (614)
.+|++|||||++.||..+++.|.+ .|.+ |++..|.+..... .+.+.+.. +. ...
T Consensus 60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~---Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~--------~~-----~G~ 123 (422)
T 3s8m_A 60 GPKKVLVIGASSGYGLASRITAAFGFGAD---TLGVFFEKPGTASKAGTAGWYNSAAFDKHA--------KA-----AGL 123 (422)
T ss_dssp SCSEEEEESCSSHHHHHHHHHHHHHHCCE---EEEEECCCCCCSSSCCCHHHHHHHHHHHHH--------HH-----TTC
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhCCCE---EEEEeCCchhhhhhhcccccchhHHHHHHH--------Hh-----cCC
Confidence 479999999999999999999999 9866 7778887543221 01111111 10 234
Q ss_pred eEEEEeCCCCCCCCCCCHHHHHHHh--------ccccEEEEccccc----------------C-----------------
Q psy6053 171 KVLPISGDAEADELAIKESDRQLLA--------SEVDIMIHGAATI----------------R----------------- 209 (614)
Q Consensus 171 ~v~~v~gDl~~~~lGLs~~~~~~l~--------~~vd~ViH~AA~v----------------~----------------- 209 (614)
++..+.+|+++++ +.+.++ ..+|++||+||.. .
T Consensus 124 ~a~~i~~Dvtd~~------~v~~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~ 197 (422)
T 3s8m_A 124 YSKSINGDAFSDA------ARAQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTI 197 (422)
T ss_dssp CEEEEESCTTSHH------HHHHHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEE
T ss_pred cEEEEEecCCCHH------HHHHHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccc
Confidence 6788999999976 554443 4589999999851 0
Q ss_pred --------hhHHHHHHHHHhHHHHH-HHHHHHHHcC---CCceEEEEeCceeccCCcccccccCCCCCChhHHHHHHhhc
Q psy6053 210 --------FDEALKKAVLLNTRGTK-MMLSLAKEMK---HLELFVHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMM 277 (614)
Q Consensus 210 --------~~~~~~~~~~~Nv~gt~-~ll~la~~~~---~~k~~V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~ 277 (614)
-.+.++..+++|..++. .+++.+.... +-.++|.+||..+....
T Consensus 198 ~~~~~~~~t~e~~~~~v~Vn~~~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~~~------------------------ 253 (422)
T 3s8m_A 198 IQASIEPASAQEIEDTITVMGGQDWELWIDALEGAGVLADGARSVAFSYIGTEITW------------------------ 253 (422)
T ss_dssp EEEEECCCCHHHHHHHHHHHSSHHHHHHHHHHHHTTCEEEEEEEEEEEECCCGGGH------------------------
T ss_pred cccccCCCCHHHHHHHHHhhchhHHHHHHHHHHHHHHhhCCCEEEEEeCchhhccC------------------------
Confidence 12445666777766664 5566554311 11479999998653211
Q ss_pred chhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCCEEEeecceeecc
Q psy6053 278 SEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMPCLMLRPSIIIPV 329 (614)
Q Consensus 278 ~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp~~IvRp~~I~g~ 329 (614)
|. .+...|+.||+.-+.+.+..+. +|+.+..+.||.|-.+
T Consensus 254 ---------p~---~~~~aY~ASKaAl~~lTrsLA~Ela~~GIRVNaVaPG~i~T~ 297 (422)
T 3s8m_A 254 ---------PI---YWHGALGKAKVDLDRTAQRLNARLAKHGGGANVAVLKSVVTQ 297 (422)
T ss_dssp ---------HH---HTSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCT
T ss_pred ---------CC---ccchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEcCCCcCh
Confidence 00 0014799999988877766554 6999999999988544
No 311
>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}
Probab=98.90 E-value=5.9e-09 Score=116.85 Aligned_cols=209 Identities=14% Similarity=0.159 Sum_probs=133.7
Q ss_pred ccCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCC
Q psy6053 99 TFTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGD 178 (614)
Q Consensus 99 ~~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gD 178 (614)
.++||+++||||++.||+.+++.|++.|.. |++..|.. . ++-.+++ +. ...++..+.+|
T Consensus 319 ~l~gkvalVTGas~GIG~a~A~~la~~Ga~---Vv~~~~~~-~---~~~~~~i---------~~-----~g~~~~~~~~D 377 (604)
T 2et6_A 319 SLKDKVVLITGAGAGLGKEYAKWFAKYGAK---VVVNDFKD-A---TKTVDEI---------KA-----AGGEAWPDQHD 377 (604)
T ss_dssp CCTTCEEEESSCSSHHHHHHHHHHHHTTCE---EEEECSSC-C---HHHHHHH---------HH-----TTCEEEEECCC
T ss_pred ccCCCeEEEECcchHHHHHHHHHHHHCCCE---EEEEeCcc-H---HHHHHHH---------Hh-----cCCeEEEEEcC
Confidence 367899999999999999999999999976 77766632 1 1111221 10 22457778889
Q ss_pred C-CCCCCCCCHHHHHHH---hccccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHHc---CCCceEEEE
Q psy6053 179 A-EADELAIKESDRQLL---ASEVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKEM---KHLELFVHI 244 (614)
Q Consensus 179 l-~~~~lGLs~~~~~~l---~~~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~V~v 244 (614)
+ ++.+ ..++.+ ..++|++||+||.... .+.++..+++|+.|+..+.+.+... .+-.++|++
T Consensus 378 v~~~~~-----~~~~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVni 452 (604)
T 2et6_A 378 VAKDSE-----AIIKNVIDKYGTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINI 452 (604)
T ss_dssp HHHHHH-----HHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred hHHHHH-----HHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEE
Confidence 8 4421 122333 2469999999996431 3567889999999999888876541 234689999
Q ss_pred eCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCCCEEE
Q psy6053 245 STAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGMPCLM 320 (614)
Q Consensus 245 ST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~glp~~I 320 (614)
||..+.... |. ...|+.||+....+.+..+. +|+.+..
T Consensus 453 sS~ag~~~~----------~~----------------------------~~~Y~asKaal~~lt~~la~El~~~gIrVn~ 494 (604)
T 2et6_A 453 TSTSGIYGN----------FG----------------------------QANYSSSKAGILGLSKTMAIEGAKNNIKVNI 494 (604)
T ss_dssp CCHHHHSCC----------TT----------------------------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEE
T ss_pred CChhhccCC----------CC----------------------------ChhHHHHHHHHHHHHHHHHHHhCccCeEEEE
Confidence 998653211 00 14799999977776665443 6899999
Q ss_pred eecceeecccCCCCccccCCCCchHHHHHHHhcCceeeEeeCCCccccceeHHHHHHHHHHHHHhhhhcCCCCccEEEec
Q psy6053 321 LRPSIIIPVWREPLPGWTDNINGPTGLLIGAGKGVIRTMFCDNTGYADFLPVDITINGIFVAIWAYLSQKEHRQSIVHLT 400 (614)
Q Consensus 321 vRp~~I~g~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~vpVDdva~aii~~~~~~~~~~~~~~~vyni~ 400 (614)
+.||. . +++.. .. . . +...+....+++|++++.++..... ..++++.+.
T Consensus 495 v~PG~--~---T~m~~---~~------~----~----------~~~~~~~~pe~vA~~v~~L~s~~~~---itG~~~~vd 543 (604)
T 2et6_A 495 VAPHA--E---TAMTL---SI------M----R----------EQDKNLYHADQVAPLLVYLGTDDVP---VTGETFEIG 543 (604)
T ss_dssp EEECC--C---CCC--------------------------------CCSSCGGGTHHHHHHTTSTTCC---CCSCEEEEE
T ss_pred EcCCC--C---Ccccc---cc------C----c----------hhhccCCCHHHHHHHHHHHhCCccC---CCCcEEEEC
Confidence 99983 1 11100 00 0 0 0001234678899998877644321 366777776
Q ss_pred cC
Q psy6053 401 SS 402 (614)
Q Consensus 401 ~~ 402 (614)
++
T Consensus 544 GG 545 (604)
T 2et6_A 544 GG 545 (604)
T ss_dssp TT
T ss_pred CC
Confidence 65
No 312
>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*
Probab=98.89 E-value=1.9e-08 Score=107.04 Aligned_cols=171 Identities=9% Similarity=-0.055 Sum_probs=113.3
Q ss_pred cCCcEEEEecccccccHH--HHHHHHhhCCCccEEEEEEccCCCcCH---------HHHHHHHHhChhhHHhhhhccccc
Q psy6053 100 FTGKTLFMTGASGFLGKV--LLEKILRKSPNVKKIYILMRQKKGKNA---------RQRIEELFASPLFNLLKSVHGQKI 168 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~--Ll~~Ll~~g~~v~~V~~LvR~~~~~~~---------~~Rl~~~~~~~~f~~l~~~~p~~~ 168 (614)
..+|++|||||++.||.. +++.|.+.|.+ |+++.|.+..... .+.+++..+ . .
T Consensus 58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~---Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~------------~-~ 121 (418)
T 4eue_A 58 RGPKKVLIVGASSGFGLATRISVAFGGPEAH---TIGVSYETGATDRRIGTAGWYNNIFFKEFAK------------K-K 121 (418)
T ss_dssp CCCSEEEEESCSSHHHHHHHHHHHHSSSCCE---EEEEECCCCCCSSCCCCHHHHHHHHHHHHHH------------H-T
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHHhCCCE---EEEEecCcchhhhcccccccchHHHHHHHHH------------H-c
Confidence 578999999999999999 99999988865 8888887543210 233332211 1 2
Q ss_pred cCeEEEEeCCCCCCCCCCCHHHHHHHhc-------cccEEEEccccc----------------C----------------
Q psy6053 169 IDKVLPISGDAEADELAIKESDRQLLAS-------EVDIMIHGAATI----------------R---------------- 209 (614)
Q Consensus 169 ~~~v~~v~gDl~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v----------------~---------------- 209 (614)
..++..+.+|+++++ +.+.+++ ++|++||+||.. .
T Consensus 122 g~~~~~~~~Dvtd~~------~v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~ 195 (418)
T 4eue_A 122 GLVAKNFIEDAFSNE------TKDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDE 195 (418)
T ss_dssp TCCEEEEESCTTCHH------HHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTE
T ss_pred CCcEEEEEeeCCCHH------HHHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccc
Confidence 346889999999865 5555543 589999999863 0
Q ss_pred ---------hhHHHHHHHHHhHHHHH-HHHHHHHHcCCC----ceEEEEeCceeccCCcccccccCCCCCChhHHHHHHh
Q psy6053 210 ---------FDEALKKAVLLNTRGTK-MMLSLAKEMKHL----ELFVHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVE 275 (614)
Q Consensus 210 ---------~~~~~~~~~~~Nv~gt~-~ll~la~~~~~~----k~~V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~ 275 (614)
-.+.++..+++|..+.. .+++.+.. +.+ .++|.+||..+.... |.
T Consensus 196 ~~~~~~~~~t~e~~~~~~~vn~~~~~~~~~~~l~~-~~~~~~gg~IV~iSSi~~~~~~----------p~---------- 254 (418)
T 4eue_A 196 ITLKKVSSASIEEIEETRKVMGGEDWQEWCEELLY-EDCFSDKATTIAYSYIGSPRTY----------KI---------- 254 (418)
T ss_dssp EEEEEECBCCHHHHHHHHHHHSSHHHHHHHHHHHH-TTCEEEEEEEEEEECCCCGGGT----------TT----------
T ss_pred cccccccCCCHHHHHHHHHHhhHHHHHHHHHHHHH-HhhhcCCcEEEEEeCchhcCCC----------Cc----------
Confidence 12445566666766655 55555544 222 468999987542211 00
Q ss_pred hcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHh----h-CCCCEEEeecceeecc
Q psy6053 276 MMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAM----N-NGMPCLMLRPSIIIPV 329 (614)
Q Consensus 276 ~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~----~-~glp~~IvRp~~I~g~ 329 (614)
.+...|+.||+.-+.+.+..+ . .|+.+..+-||.|-.+
T Consensus 255 ----------------~~~~aY~ASKaAL~~ltrsLA~ELa~~~GIrVN~V~PG~v~T~ 297 (418)
T 4eue_A 255 ----------------YREGTIGIAKKDLEDKAKLINEKLNRVIGGRAFVSVNKALVTK 297 (418)
T ss_dssp ----------------TTTSHHHHHHHHHHHHHHHHHHHHHHHHSCEEEEEECCCCCCH
T ss_pred ----------------cccHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEECCcCcCh
Confidence 011579999998776665543 3 4899999999987544
No 313
>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}
Probab=98.81 E-value=1.6e-08 Score=113.34 Aligned_cols=166 Identities=15% Similarity=0.118 Sum_probs=107.0
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCC------CcCHHHHHHHHHhChhhHHhhhhccccccCeEE
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKK------GKNARQRIEELFASPLFNLLKSVHGQKIIDKVL 173 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~------~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~ 173 (614)
+++|+++||||++.||+.+++.|++.|.. |++..|... +....+.+.+. ++. ...+..
T Consensus 6 l~gkvalVTGas~GIG~a~A~~la~~Ga~---Vv~~~~~~~~~~~gr~~~~~~~~~~~--------i~~-----~g~~~~ 69 (604)
T 2et6_A 6 FKDKVVIITGAGGGLGKYYSLEFAKLGAK---VVVNDLGGALNGQGGNSKAADVVVDE--------IVK-----NGGVAV 69 (604)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCE---EEEECC-----------CHHHHHHHH--------HHH-----TTCEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHcCCE---EEEEeCCccccccccchHHHHHHHHH--------HHh-----cCCeEE
Confidence 57899999999999999999999999876 777776531 11112222111 111 112222
Q ss_pred EEeCCCCCCCCCCCHHHHHHH---hccccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHH-c--CCCce
Q psy6053 174 PISGDAEADELAIKESDRQLL---ASEVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKE-M--KHLEL 240 (614)
Q Consensus 174 ~v~gDl~~~~lGLs~~~~~~l---~~~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~-~--~~~k~ 240 (614)
+|+++..- -++.++.+ +..+|++||+||.... .+.++..+++|+.|+..+.+.+.. | .+-.+
T Consensus 70 ---~d~~d~~~--~~~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~ 144 (604)
T 2et6_A 70 ---ADYNNVLD--GDKIVETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGR 144 (604)
T ss_dssp ---EECCCTTC--HHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEE
T ss_pred ---EEcCCHHH--HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCE
Confidence 46665430 01122322 2469999999996431 356788999999999988877653 1 23358
Q ss_pred EEEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh----CCC
Q psy6053 241 FVHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN----NGM 316 (614)
Q Consensus 241 ~V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~----~gl 316 (614)
+|++||..+.... | ....|+.||+..+.+.+..+. +|+
T Consensus 145 IVnisS~ag~~~~----------~----------------------------~~~~Y~asKaal~~lt~~la~El~~~gI 186 (604)
T 2et6_A 145 IVNTSSPAGLYGN----------F----------------------------GQANYASAKSALLGFAETLAKEGAKYNI 186 (604)
T ss_dssp EEEECCHHHHHCC----------T----------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTE
T ss_pred EEEECCHHHcCCC----------C----------------------------CchHHHHHHHHHHHHHHHHHHHhCccCe
Confidence 9999998653211 0 014799999977777665543 689
Q ss_pred CEEEeecc
Q psy6053 317 PCLMLRPS 324 (614)
Q Consensus 317 p~~IvRp~ 324 (614)
.+..+.|+
T Consensus 187 rVn~v~Pg 194 (604)
T 2et6_A 187 KANAIAPL 194 (604)
T ss_dssp EEEEEEEC
T ss_pred EEEEEccC
Confidence 99999997
No 314
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=98.80 E-value=1.5e-08 Score=129.60 Aligned_cols=170 Identities=18% Similarity=0.200 Sum_probs=120.7
Q ss_pred ccCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCH-HHHHHHHHhChhhHHhhhhccccccCeEEEEeC
Q psy6053 99 TFTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNA-RQRIEELFASPLFNLLKSVHGQKIIDKVLPISG 177 (614)
Q Consensus 99 ~~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~-~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~g 177 (614)
|-.+|+++||||+|.||..+++.|++.|.. .|+++.|+...... .+.++++.. ...++.++.+
T Consensus 1881 ~~~~k~~lITGgs~GIG~aia~~la~~Ga~--~vvl~~R~~~~~~~~~~~~~~l~~--------------~g~~v~~~~~ 1944 (2512)
T 2vz8_A 1881 CPPHKSYVITGGLGGFGLQLAQWLRLRGAQ--KLVLTSRSGIRTGYQARQVREWRR--------------QGVQVLVSTS 1944 (2512)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTCC--EEEEECSSCCCSHHHHHHHHHHHH--------------TTCEEEEECC
T ss_pred cCCCCEEEEECCCCCHHHHHHHHHHHCCCC--EEEEEeCCCcchHHHHHHHHHHHh--------------CCCEEEEEec
Confidence 446899999999999999999999999865 47788887654322 222222211 2347889999
Q ss_pred CCCCCCCCCCHHHHHHHhc------cccEEEEcccccCh-------hHHHHHHHHHhHHHHHHHHHHHHH-cCCCceEEE
Q psy6053 178 DAEADELAIKESDRQLLAS------EVDIMIHGAATIRF-------DEALKKAVLLNTRGTKMMLSLAKE-MKHLELFVH 243 (614)
Q Consensus 178 Dl~~~~lGLs~~~~~~l~~------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~-~~~~k~~V~ 243 (614)
|+++++ +++.+++ .+|+|||+|+.... .+.++..+++|+.|+.++.+++.. ++...+||.
T Consensus 1945 Dvsd~~------~v~~~~~~~~~~g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~ 2018 (2512)
T 2vz8_A 1945 NASSLD------GARSLITEATQLGPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFVI 2018 (2512)
T ss_dssp CSSSHH------HHHHHHHHHHHHSCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTCCEEEE
T ss_pred CCCCHH------HHHHHHHHHHhcCCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEEE
Confidence 999865 5555543 58999999996532 234566789999999999888765 345679999
Q ss_pred EeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhhCCCCEEEeec
Q psy6053 244 ISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMNNGMPCLMLRP 323 (614)
Q Consensus 244 vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~~glp~~IvRp 323 (614)
+||..+..... ....|+.+|+..+.+.+.....|+|...+-.
T Consensus 2019 iSS~ag~~g~~--------------------------------------g~~~Y~aaKaal~~l~~~rr~~Gl~~~a~~~ 2060 (2512)
T 2vz8_A 2019 FSSVSCGRGNA--------------------------------------GQANYGFANSAMERICEKRRHDGLPGLAVQW 2060 (2512)
T ss_dssp ECCHHHHTTCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHTTSCCCEEEE
T ss_pred ecchhhcCCCC--------------------------------------CcHHHHHHHHHHHHHHHHHHHCCCcEEEEEc
Confidence 99986532110 0147999999999999876667999988888
Q ss_pred ceeec
Q psy6053 324 SIIIP 328 (614)
Q Consensus 324 ~~I~g 328 (614)
|.+.+
T Consensus 2061 g~~~~ 2065 (2512)
T 2vz8_A 2061 GAIGD 2065 (2512)
T ss_dssp CCBCT
T ss_pred cCcCC
Confidence 76643
No 315
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=98.59 E-value=3.5e-08 Score=102.29 Aligned_cols=187 Identities=11% Similarity=0.058 Sum_probs=108.8
Q ss_pred CcEEEEecccccccHHHHHHHHhhCC----CccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeC
Q psy6053 102 GKTLFMTGASGFLGKVLLEKILRKSP----NVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISG 177 (614)
Q Consensus 102 ~~~VLITGaTGFlG~~Ll~~Ll~~g~----~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~g 177 (614)
.++|+||||+||+|.+++..|+..+. .+..|.++++.+. ...+|++.... .+.+. ... . .+
T Consensus 5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~--~~~~~~~g~~~-----dl~~~----~~~-~---~~ 69 (329)
T 1b8p_A 5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNE--KAQKALQGVMM-----EIDDC----AFP-L---LA 69 (329)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCH--HHHHHHHHHHH-----HHHTT----TCT-T---EE
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCc--cccccchhhHH-----HHhhh----ccc-c---cC
Confidence 47999999999999999999998763 1235777766510 00122221000 01100 000 0 12
Q ss_pred CCCCCCCCCCHHHHHHHhccccEEEEcccccCh-hHHHHHHHHHhHHHHHHHHHHHHHcCCCc-eEEEEeCce-eccCCc
Q psy6053 178 DAEADELAIKESDRQLLASEVDIMIHGAATIRF-DEALKKAVLLNTRGTKMMLSLAKEMKHLE-LFVHISTAY-CHLQEK 254 (614)
Q Consensus 178 Dl~~~~lGLs~~~~~~l~~~vd~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~la~~~~~~k-~~V~vST~~-~~~~~~ 254 (614)
|+.... ++.+.++++|+|||+||..+- ..+..++...|+.+++++++.+.+..+.+ .|+++|.-. ....
T Consensus 70 ~i~~~~------~~~~al~~aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SNPv~~~t~-- 141 (329)
T 1b8p_A 70 GMTAHA------DPMTAFKDADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGNPANTNAY-- 141 (329)
T ss_dssp EEEEES------SHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHH--
T ss_pred cEEEec------CcHHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccCchHHHHH--
Confidence 333322 567778999999999997642 33445788999999999999999963245 788877521 1000
Q ss_pred ccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHHHHHHHHHhh-CCCCEEEeecceeeccc-CC
Q psy6053 255 VLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLSEGLVVEAMN-NGMPCLMLRPSIIIPVW-RE 332 (614)
Q Consensus 255 ~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~aE~lv~~~~~-~glp~~IvRp~~I~g~~-~~ 332 (614)
...+ .++.+. .-+.|+.|+.-..++....++ .|++..-++...|+|.. .+
T Consensus 142 ~~~~--------------------------~~~~~p--~~~v~g~t~Ld~~r~~~~la~~lgv~~~~v~~~~v~G~Hg~s 193 (329)
T 1b8p_A 142 IAMK--------------------------SAPSLP--AKNFTAMLRLDHNRALSQIAAKTGKPVSSIEKLFVWGNHSPT 193 (329)
T ss_dssp HHHH--------------------------TCTTSC--GGGEEECCHHHHHHHHHHHHHHHTCCGGGEESCEEEBCSSTT
T ss_pred HHHH--------------------------HcCCCC--HHHEEEeecHHHHHHHHHHHHHhCcCHHHceEEEEEeccCCc
Confidence 0000 000000 013577787767666666555 47776777766666743 33
Q ss_pred CCccccC
Q psy6053 333 PLPGWTD 339 (614)
Q Consensus 333 p~~gw~d 339 (614)
-+|-|..
T Consensus 194 ~~p~~s~ 200 (329)
T 1b8p_A 194 MYADYRY 200 (329)
T ss_dssp CEEECSS
T ss_pred EeeehHH
Confidence 3455543
No 316
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=98.59 E-value=1.2e-07 Score=82.06 Aligned_cols=94 Identities=17% Similarity=0.129 Sum_probs=70.2
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCCC
Q psy6053 102 GKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAEA 181 (614)
Q Consensus 102 ~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~~ 181 (614)
+++|+|+|+ |++|+.+++.|++.| ..+|+++.|+. ++++.+. ..++..+.+|+++
T Consensus 5 ~~~v~I~G~-G~iG~~~~~~l~~~g--~~~v~~~~r~~------~~~~~~~----------------~~~~~~~~~d~~~ 59 (118)
T 3ic5_A 5 RWNICVVGA-GKIGQMIAALLKTSS--NYSVTVADHDL------AALAVLN----------------RMGVATKQVDAKD 59 (118)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHHCS--SEEEEEEESCH------HHHHHHH----------------TTTCEEEECCTTC
T ss_pred cCeEEEECC-CHHHHHHHHHHHhCC--CceEEEEeCCH------HHHHHHH----------------hCCCcEEEecCCC
Confidence 579999999 999999999999997 12488898863 3333321 1356778899987
Q ss_pred CCCCCCHHHHHHHhccccEEEEcccccChhHHHHHHHHHhHHHHHHHHHHHHHcCCCceEE
Q psy6053 182 DELAIKESDRQLLASEVDIMIHGAATIRFDEALKKAVLLNTRGTKMMLSLAKEMKHLELFV 242 (614)
Q Consensus 182 ~~lGLs~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V 242 (614)
++ ++.++++++|+|||+++.. .+.++++.|.+ .+++.+.
T Consensus 60 ~~------~~~~~~~~~d~vi~~~~~~---------------~~~~~~~~~~~-~g~~~~~ 98 (118)
T 3ic5_A 60 EA------GLAKALGGFDAVISAAPFF---------------LTPIIAKAAKA-AGAHYFD 98 (118)
T ss_dssp HH------HHHHHTTTCSEEEECSCGG---------------GHHHHHHHHHH-TTCEEEC
T ss_pred HH------HHHHHHcCCCEEEECCCch---------------hhHHHHHHHHH-hCCCEEE
Confidence 54 7888889999999998632 13568888888 4766554
No 317
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=98.54 E-value=1e-07 Score=98.04 Aligned_cols=122 Identities=13% Similarity=0.101 Sum_probs=79.0
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCCCC
Q psy6053 103 KTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAEAD 182 (614)
Q Consensus 103 ~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~~~ 182 (614)
|+|+||||+||+|.+++..|+..+. +..+.+++++... +|++.... .+.+..+. ....+.+..+| +
T Consensus 1 mKI~V~GaaG~vG~~l~~~L~~~~~-~~el~L~Di~~~~----~~~~~~~~-----dl~~~~~~-~~~~~~i~~~~--d- 66 (313)
T 1hye_A 1 MKVTIIGASGRVGSATALLLAKEPF-MKDLVLIGREHSI----NKLEGLRE-----DIYDALAG-TRSDANIYVES--D- 66 (313)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTT-CCEEEEEECGGGH----HHHHHHHH-----HHHHHHTT-SCCCCEEEEEE--T-
T ss_pred CEEEEECCCChhHHHHHHHHHhCCC-CCEEEEEcCCCch----hhhHHHHH-----HHHHhHHh-cCCCeEEEeCC--c-
Confidence 5799999999999999999998864 3457777763221 22221000 00000010 11223333322 0
Q ss_pred CCCCCHHHHHHHhccccEEEEcccccCh-hHHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEeCc
Q psy6053 183 ELAIKESDRQLLASEVDIMIHGAATIRF-DEALKKAVLLNTRGTKMMLSLAKEMKHLELFVHISTA 247 (614)
Q Consensus 183 ~lGLs~~~~~~l~~~vd~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vST~ 247 (614)
++.+.++++|+|||+||..+- .....+....|+.+++++++.+++. + +++++++|-
T Consensus 67 -------~l~~al~gaD~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~-~-~~~vlv~SN 123 (313)
T 1hye_A 67 -------ENLRIIDESDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEI-C-DTKIFVITN 123 (313)
T ss_dssp -------TCGGGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-C-CCEEEECSS
T ss_pred -------chHHHhCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHh-C-CeEEEEecC
Confidence 134457899999999997642 3344567899999999999999996 6 889998885
No 318
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=98.53 E-value=1.6e-07 Score=97.04 Aligned_cols=118 Identities=14% Similarity=0.077 Sum_probs=82.0
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCCC
Q psy6053 102 GKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAEA 181 (614)
Q Consensus 102 ~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~~ 181 (614)
+++|+||||+||+|..++..|+.+|. +.+|.++++.+. .....++.+. . ...++..+.+
T Consensus 8 ~mKI~ViGAaG~VG~~la~~L~~~g~-~~ev~l~Di~~~----~~~~~dL~~~-----------~-~~~~v~~~~~---- 66 (326)
T 1smk_A 8 GFKVAILGAAGGIGQPLAMLMKMNPL-VSVLHLYDVVNA----PGVTADISHM-----------D-TGAVVRGFLG---- 66 (326)
T ss_dssp CEEEEEETTTSTTHHHHHHHHHHCTT-EEEEEEEESSSH----HHHHHHHHTS-----------C-SSCEEEEEES----
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCC-CCEEEEEeCCCc----HhHHHHhhcc-----------c-ccceEEEEeC----
Confidence 47899999999999999999988763 345888876542 1111122110 0 1112332221
Q ss_pred CCCCCCHHHHHHHhccccEEEEcccccCh-hHHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEeCc
Q psy6053 182 DELAIKESDRQLLASEVDIMIHGAATIRF-DEALKKAVLLNTRGTKMMLSLAKEMKHLELFVHISTA 247 (614)
Q Consensus 182 ~~lGLs~~~~~~l~~~vd~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vST~ 247 (614)
..++.+.++++|+|||+|+...- ..+..++...|+.+++++++.+.+. +.+.+++++|-
T Consensus 67 ------t~d~~~al~gaDvVi~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~-~p~~~viv~SN 126 (326)
T 1smk_A 67 ------QQQLEAALTGMDLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKC-CPRAIVNLISN 126 (326)
T ss_dssp ------HHHHHHHHTTCSEEEECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHH-CTTSEEEECCS
T ss_pred ------CCCHHHHcCCCCEEEEcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhh-CCCeEEEEECC
Confidence 23677888999999999997542 2333467899999999999999995 67889999875
No 319
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=98.37 E-value=1.1e-06 Score=89.81 Aligned_cols=119 Identities=11% Similarity=-0.014 Sum_probs=78.8
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCCCC
Q psy6053 103 KTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAEAD 182 (614)
Q Consensus 103 ~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~~~ 182 (614)
|+|+||||+||+|..++..|+..+. +.++.+++++.. .+|++... . .+.+..+ ...++.+..+| .
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~~~-~~el~L~Di~~~----~~~~~~~~-~----dl~~~~~--~~~~~~v~~~~---~ 65 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALRDI-ADEVVFVDIPDK----EDDTVGQA-A----DTNHGIA--YDSNTRVRQGG---Y 65 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-CSEEEEECCGGG----HHHHHHHH-H----HHHHHHT--TTCCCEEEECC---G
T ss_pred CEEEEECCCChHHHHHHHHHHhCCC-CCEEEEEcCCCC----hhhHHHHH-H----HHHHHHh--hCCCcEEEeCC---H
Confidence 5899999999999999999998765 345777776221 12232110 0 1111000 11233433332 1
Q ss_pred CCCCCHHHHHHHhccccEEEEcccccCh-hHHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEeCc
Q psy6053 183 ELAIKESDRQLLASEVDIMIHGAATIRF-DEALKKAVLLNTRGTKMMLSLAKEMKHLELFVHISTA 247 (614)
Q Consensus 183 ~lGLs~~~~~~l~~~vd~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vST~ 247 (614)
+.++++|+|||+|+...- .....++...|+.+++++++.+++. +.+.+++++|-
T Consensus 66 ----------~a~~~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~-~p~~~viv~SN 120 (303)
T 1o6z_A 66 ----------EDTAGSDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEH-NDDYISLTTSN 120 (303)
T ss_dssp ----------GGGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTT-CSCCEEEECCS
T ss_pred ----------HHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCcEEEEeCC
Confidence 236799999999997642 3344567899999999999999995 78889998875
No 320
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=98.26 E-value=5.3e-06 Score=106.38 Aligned_cols=172 Identities=10% Similarity=0.043 Sum_probs=109.7
Q ss_pred ccCCcEEEEeccccc-ccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeC
Q psy6053 99 TFTGKTLFMTGASGF-LGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISG 177 (614)
Q Consensus 99 ~~~~~~VLITGaTGF-lG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~g 177 (614)
.++||+++||||++. ||+.+++.|++.|.+ |++..|+.... ..+.++++ .++... ...++..+.+
T Consensus 2133 ~l~gKvaLVTGAs~GsIG~AiA~~La~~GA~---Vvi~~r~~~~~-~~~~~~~l---------~~~l~~-~G~~~~~v~~ 2198 (3089)
T 3zen_D 2133 XXXDEVAVVTGASKGSIAASVVGQLLDGGAT---VIATTSRLDDD-RLAFYKQL---------YRDHAR-FDATLWVVPA 2198 (3089)
T ss_dssp CCCCCEEEEESCCTTSHHHHHHHHHHHTTCE---EEEEESCCSHH-HHHHHHHH---------HHHHCC-TTCEEEEEEC
T ss_pred cCCCCEEEEeCCChhHHHHHHHHHHHHCCCE---EEEEeCChhhh-hhHHHHHH---------HHHHhh-cCCeEEEEEe
Confidence 378999999999999 999999999999976 77888865321 11112222 111122 3357889999
Q ss_pred CCCCCCCCCCHHHHHHHh----c-------cccEEEEcccc----cC------------hhHHHHHHHHHhHHHHHHHHH
Q psy6053 178 DAEADELAIKESDRQLLA----S-------EVDIMIHGAAT----IR------------FDEALKKAVLLNTRGTKMMLS 230 (614)
Q Consensus 178 Dl~~~~lGLs~~~~~~l~----~-------~vd~ViH~AA~----v~------------~~~~~~~~~~~Nv~gt~~ll~ 230 (614)
|+++++ +.+.++ + .+|++||+||. .. ++...+..+++|+.++..+++
T Consensus 2199 Dvtd~~------~v~~lv~~i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~ 2272 (3089)
T 3zen_D 2199 NMASYS------DIDKLVEWVGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLIS 2272 (3089)
T ss_dssp CTTCHH------HHHHHHHHHTSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHH
T ss_pred cCCCHH------HHHHHHHHHHhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999976 666653 2 47999999997 11 222344568999999988887
Q ss_pred HHHHc---CCCc---eEEEEeCceeccCCcccccccCCCCCChhHHHHHHhhcchhHHhhhhhhhcCCCCCchhhhHHHH
Q psy6053 231 LAKEM---KHLE---LFVHISTAYCHLQEKVLYEKPYPPPTDPHKLIERVEMMSEDTVEKRAKEFLGEFPNSYAYTKCLS 304 (614)
Q Consensus 231 la~~~---~~~k---~~V~vST~~~~~~~~~i~E~~~~~p~~~~~~~~~~~~~~~~~l~~~~p~~~~~~pn~Y~~SK~~a 304 (614)
.+... .+.. .++..+|.. .+. . +....|+.||+..
T Consensus 2273 ~~~~~m~~~~~g~~~~ii~~~ss~-~g~---~-----------------------------------g~~~aYsASKaAl 2313 (3089)
T 3zen_D 2273 GLSKIGAERDIASRLHVVLPGSPN-RGM---F-----------------------------------GGDGAYGEAKSAL 2313 (3089)
T ss_dssp HHHHHHHHTTCCCCEEEEEEECSS-TTS---C-----------------------------------SSCSSHHHHGGGH
T ss_pred HHHHHHHHcCCCceeEEEEECCcc-ccc---C-----------------------------------CCchHHHHHHHHH
Confidence 76542 1111 111111110 000 0 0114799999988
Q ss_pred HHHHHHHhhC-----CCCEEEeecceeecc
Q psy6053 305 EGLVVEAMNN-----GMPCLMLRPSIIIPV 329 (614)
Q Consensus 305 E~lv~~~~~~-----glp~~IvRp~~I~g~ 329 (614)
+.+.+..+.. ++.++.+-||.|-++
T Consensus 2314 ~~LtrslA~E~~~a~~IrVn~v~PG~v~tT 2343 (3089)
T 3zen_D 2314 DALENRWSAEKSWAERVSLAHALIGWTKGT 2343 (3089)
T ss_dssp HHHHHHHHHCSTTTTTEEEEEEECCCEECS
T ss_pred HHHHHHHHhccccCCCeEEEEEeecccCCC
Confidence 8877765542 577788888877543
No 321
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=98.14 E-value=6.7e-06 Score=88.66 Aligned_cols=108 Identities=19% Similarity=0.233 Sum_probs=74.1
Q ss_pred CCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCC
Q psy6053 101 TGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAE 180 (614)
Q Consensus 101 ~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~ 180 (614)
++++|+||| +|++|+++++.|++.|.+ |++..|.. ++.+++.+ ...++..+.+|++
T Consensus 2 ~~k~VlViG-aG~iG~~ia~~L~~~G~~---V~v~~R~~------~~a~~la~--------------~~~~~~~~~~Dv~ 57 (450)
T 1ff9_A 2 ATKSVLMLG-SGFVTRPTLDVLTDSGIK---VTVACRTL------ESAKKLSA--------------GVQHSTPISLDVN 57 (450)
T ss_dssp CCCEEEEEC-CSTTHHHHHHHHHTTTCE---EEEEESSH------HHHHHTTT--------------TCTTEEEEECCTT
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhCcCE---EEEEECCH------HHHHHHHH--------------hcCCceEEEeecC
Confidence 468999998 899999999999988754 88888863 23332211 1234678899998
Q ss_pred CCCCCCCHHHHHHHhccccEEEEcccccChhHHHHHHHH--HhH-------HHHHHHHHHHHHcCCCc
Q psy6053 181 ADELAIKESDRQLLASEVDIMIHGAATIRFDEALKKAVL--LNT-------RGTKMMLSLAKEMKHLE 239 (614)
Q Consensus 181 ~~~lGLs~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~--~Nv-------~gt~~ll~la~~~~~~k 239 (614)
+.+ ++..+++++|+|||+|+......-....++ .|+ .++.+++++|++. +++
T Consensus 58 d~~------~l~~~l~~~DvVIn~a~~~~~~~i~~a~l~~g~~vvd~~~~~~~~~~l~~aA~~a-Gv~ 118 (450)
T 1ff9_A 58 DDA------ALDAEVAKHDLVISLIPYTFHATVIKSAIRQKKHVVTTSYVSPAMMELDQAAKDA-GIT 118 (450)
T ss_dssp CHH------HHHHHHTTSSEEEECCC--CHHHHHHHHHHHTCEEEESSCCCHHHHHTHHHHHHT-TCE
T ss_pred CHH------HHHHHHcCCcEEEECCccccchHHHHHHHhCCCeEEEeecccHHHHHHHHHHHHC-CCe
Confidence 754 788888899999999986433221122233 232 4688999999994 654
No 322
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=98.05 E-value=1.8e-06 Score=87.63 Aligned_cols=82 Identities=12% Similarity=0.138 Sum_probs=60.7
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
.++|+++||||+|++|++++..|++.|.+ |++..|.. +|.+++.+ .+.. . .++.++.+|+
T Consensus 117 l~gk~vlVtGaaGGiG~aia~~L~~~G~~---V~i~~R~~------~~~~~l~~-----~~~~-----~-~~~~~~~~D~ 176 (287)
T 1lu9_A 117 VKGKKAVVLAGTGPVGMRSAALLAGEGAE---VVLCGRKL------DKAQAAAD-----SVNK-----R-FKVNVTAAET 176 (287)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCE---EEEEESSH------HHHHHHHH-----HHHH-----H-HTCCCEEEEC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCE---EEEEECCH------HHHHHHHH-----HHHh-----c-CCcEEEEecC
Confidence 56899999999999999999999999854 88888863 23332211 1110 0 1345677899
Q ss_pred CCCCCCCCHHHHHHHhccccEEEEcccc
Q psy6053 180 EADELAIKESDRQLLASEVDIMIHGAAT 207 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~~vd~ViH~AA~ 207 (614)
++++ +++.+++++|+|||+|+.
T Consensus 177 ~~~~------~~~~~~~~~DvlVn~ag~ 198 (287)
T 1lu9_A 177 ADDA------SRAEAVKGAHFVFTAGAI 198 (287)
T ss_dssp CSHH------HHHHHTTTCSEEEECCCT
T ss_pred CCHH------HHHHHHHhCCEEEECCCc
Confidence 8755 788888999999999975
No 323
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=97.87 E-value=4.6e-05 Score=67.86 Aligned_cols=101 Identities=12% Similarity=0.182 Sum_probs=66.5
Q ss_pred CCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCC
Q psy6053 101 TGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAE 180 (614)
Q Consensus 101 ~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~ 180 (614)
++++|+|+|+ |.+|..+++.|.+.|.+ |+++.|.. ++++.+ .......+.+|.+
T Consensus 5 ~~~~v~I~G~-G~iG~~~a~~l~~~g~~---v~~~d~~~------~~~~~~----------------~~~~~~~~~~d~~ 58 (144)
T 2hmt_A 5 KNKQFAVIGL-GRFGGSIVKELHRMGHE---VLAVDINE------EKVNAY----------------ASYATHAVIANAT 58 (144)
T ss_dssp -CCSEEEECC-SHHHHHHHHHHHHTTCC---CEEEESCH------HHHHTT----------------TTTCSEEEECCTT
T ss_pred cCCcEEEECC-CHHHHHHHHHHHHCCCE---EEEEeCCH------HHHHHH----------------HHhCCEEEEeCCC
Confidence 4578999998 99999999999999876 67777752 222211 1123456789987
Q ss_pred CCCCCCCHHHHHHH-hccccEEEEcccccChhHHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEeCc
Q psy6053 181 ADELAIKESDRQLL-ASEVDIMIHGAATIRFDEALKKAVLLNTRGTKMMLSLAKEMKHLELFVHISTA 247 (614)
Q Consensus 181 ~~~lGLs~~~~~~l-~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vST~ 247 (614)
+++ .+.++ .+++|+||++++.. . +.|. .+.+.|++. ++++++..++.
T Consensus 59 ~~~------~l~~~~~~~~d~vi~~~~~~-~--------~~~~----~~~~~~~~~-~~~~ii~~~~~ 106 (144)
T 2hmt_A 59 EEN------ELLSLGIRNFEYVIVAIGAN-I--------QAST----LTTLLLKEL-DIPNIWVKAQN 106 (144)
T ss_dssp CHH------HHHTTTGGGCSEEEECCCSC-H--------HHHH----HHHHHHHHT-TCSEEEEECCS
T ss_pred CHH------HHHhcCCCCCCEEEECCCCc-h--------HHHH----HHHHHHHHc-CCCeEEEEeCC
Confidence 643 56554 67899999998752 0 1222 356667775 56666655544
No 324
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=97.82 E-value=2.7e-05 Score=75.70 Aligned_cols=81 Identities=16% Similarity=0.247 Sum_probs=54.4
Q ss_pred CCcEEEEecc----------------cccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhc
Q psy6053 101 TGKTLFMTGA----------------SGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVH 164 (614)
Q Consensus 101 ~~~~VLITGa----------------TGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~ 164 (614)
+||+|||||| ||.+|..+++.++++|.+ |.++.|+..-..
T Consensus 2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~---V~lv~~~~~~~~--------------------- 57 (232)
T 2gk4_A 2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYE---VCLITTKRALKP--------------------- 57 (232)
T ss_dssp -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCE---EEEEECTTSCCC---------------------
T ss_pred CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCE---EEEEeCCccccc---------------------
Confidence 5899999999 999999999999999987 888888753211
Q ss_pred cccccCeEEEEeCCCCCCCCCCCHHHHHHHhccccEEEEcccccChh
Q psy6053 165 GQKIIDKVLPISGDAEADELAIKESDRQLLASEVDIMIHGAATIRFD 211 (614)
Q Consensus 165 p~~~~~~v~~v~gDl~~~~lGLs~~~~~~l~~~vd~ViH~AA~v~~~ 211 (614)
. ...++..+..+-.+.- .+.....+.++|++||+||...|.
T Consensus 58 -~-~~~~~~~~~v~s~~em----~~~v~~~~~~~Dili~aAAvsD~~ 98 (232)
T 2gk4_A 58 -E-PHPNLSIREITNTKDL----LIEMQERVQDYQVLIHSMAVSDYT 98 (232)
T ss_dssp -C-CCTTEEEEECCSHHHH----HHHHHHHGGGCSEEEECSBCCSEE
T ss_pred -c-CCCCeEEEEHhHHHHH----HHHHHHhcCCCCEEEEcCcccccc
Confidence 0 1134555544321100 012233345799999999987664
No 325
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=97.76 E-value=0.00017 Score=73.82 Aligned_cols=114 Identities=13% Similarity=0.060 Sum_probs=75.4
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCCCC
Q psy6053 103 KTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAEAD 182 (614)
Q Consensus 103 ~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~~~ 182 (614)
|+|.|+||+|++|..++..|+..|. +..|.++++.+ .+....++.+. . ...++....+
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~-~~ev~L~Di~~----~~~~a~dL~~~-----------~-~~~~l~~~~~----- 58 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPL-VSRLTLYDIAH----TPGVAADLSHI-----------E-TRATVKGYLG----- 58 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTT-CSEEEEEESSS----HHHHHHHHTTS-----------S-SSCEEEEEES-----
T ss_pred CEEEEECCCChHHHHHHHHHHhCCC-CcEEEEEeCCc----cHHHHHHHhcc-----------C-cCceEEEecC-----
Confidence 5799999999999999999988763 45699999875 11111122110 0 1113333322
Q ss_pred CCCCCHHHHHHHhccccEEEEcccccC-hhHHHHHHHHHhHHHHHHHHHHHHHcCCCc-eEEEE
Q psy6053 183 ELAIKESDRQLLASEVDIMIHGAATIR-FDEALKKAVLLNTRGTKMMLSLAKEMKHLE-LFVHI 244 (614)
Q Consensus 183 ~lGLs~~~~~~l~~~vd~ViH~AA~v~-~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k-~~V~v 244 (614)
..++++.++++|+||++|+... ..+...+....|+..++.+++.+.+. ... .++.+
T Consensus 59 -----t~d~~~a~~~aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~viv~ 116 (314)
T 1mld_A 59 -----PEQLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQH-CPDAMICII 116 (314)
T ss_dssp -----GGGHHHHHTTCSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHH-CTTSEEEEC
T ss_pred -----CCCHHHHhCCCCEEEECCCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhh-CCCeEEEEE
Confidence 0157777899999999998764 22333456789999999999998885 344 44443
No 326
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=97.68 E-value=1.1e-05 Score=83.38 Aligned_cols=119 Identities=16% Similarity=0.110 Sum_probs=73.9
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccE-----EEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEe
Q psy6053 102 GKTLFMTGASGFLGKVLLEKILRKSPNVKK-----IYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPIS 176 (614)
Q Consensus 102 ~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~-----V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~ 176 (614)
.++|.||||+|++|.+++..|+..+. +.+ |+++++.+....++....++.+. ..| ....+..
T Consensus 3 ~~kV~V~GaaG~VG~~la~~L~~~~~-~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~--------~~~--~~~~~~~-- 69 (333)
T 5mdh_A 3 PIRVLVTGAAGQIAYSLLYSIGNGSV-FGKDQPIILVLLDITPMMGVLDGVLMELQDC--------ALP--LLKDVIA-- 69 (333)
T ss_dssp CEEEEESSTTSHHHHTTHHHHHTTTT-TCTTCCEEEEEECCGGGHHHHHHHHHHHHHT--------CCT--TEEEEEE--
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCCC-ccccCCCEEEEEeCCCccccchhhHhhhHhh--------hhc--ccCCEEE--
Confidence 47899999999999999999987653 233 77777753211111111122110 001 1111111
Q ss_pred CCCCCCCCCCCHHHHHHHhccccEEEEcccccC-hhHHHHHHHHHhHHHHHHHHHHHHHcCCCc--eEEEEe
Q psy6053 177 GDAEADELAIKESDRQLLASEVDIMIHGAATIR-FDEALKKAVLLNTRGTKMMLSLAKEMKHLE--LFVHIS 245 (614)
Q Consensus 177 gDl~~~~lGLs~~~~~~l~~~vd~ViH~AA~v~-~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k--~~V~vS 245 (614)
.. +..+.++++|+|||+||..+ ..++..+.++.|+..++++++.+++. +.+ .++.+|
T Consensus 70 -----~~------~~~~~~~daDvVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~-~~~~~~vivvs 129 (333)
T 5mdh_A 70 -----TD------KEEIAFKDLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKY-AKKSVKVIVVG 129 (333)
T ss_dssp -----ES------CHHHHTTTCSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHH-SCTTCEEEECS
T ss_pred -----cC------CcHHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCCeEEEEcC
Confidence 11 23455689999999998753 23444567899999999999999996 444 355444
No 327
>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A
Probab=97.61 E-value=0.001 Score=69.16 Aligned_cols=87 Identities=18% Similarity=0.129 Sum_probs=59.7
Q ss_pred cCCcEEEEecccccccHHHHHHHH-hhCCCccEEEEEEccCCCcC-----H----HHHHHHHHhChhhHHhhhhcccccc
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKIL-RKSPNVKKIYILMRQKKGKN-----A----RQRIEELFASPLFNLLKSVHGQKII 169 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll-~~g~~v~~V~~LvR~~~~~~-----~----~~Rl~~~~~~~~f~~l~~~~p~~~~ 169 (614)
..+|+||||||+.-+|.+....|. +.|.+ |.++.|.+.... + .+-+.+. +++ ..
T Consensus 48 ~~pK~vLVtGaSsGiGlA~AialAf~~GA~---vi~v~~~~~~~~~~~atag~~~~~a~~~~--------i~~-----~G 111 (401)
T 4ggo_A 48 KAPKNVLVLGCSNGYGLASRITAAFGYGAA---TIGVSFEKAGSETKYGTPGWYNNLAFDEA--------AKR-----EG 111 (401)
T ss_dssp CCCCEEEEESCSSHHHHHHHHHHHHHHCCE---EEEEECCCCCCSSSCCCHHHHHHHHHHHH--------HHH-----HT
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHhhCCCC---EEEEecCCcccccccccccchhHHHHHHH--------HHH-----cC
Confidence 457999999999999999998887 66655 677776653321 0 0111111 111 33
Q ss_pred CeEEEEeCCCCCCCCCCCHHHHHHHhc-------cccEEEEccccc
Q psy6053 170 DKVLPISGDAEADELAIKESDRQLLAS-------EVDIMIHGAATI 208 (614)
Q Consensus 170 ~~v~~v~gDl~~~~lGLs~~~~~~l~~-------~vd~ViH~AA~v 208 (614)
.+...+.+|+++++ ..+++++ ++|+++|++|..
T Consensus 112 ~~a~~i~~Dv~d~e------~i~~vi~~i~~~~G~IDiLVhS~A~~ 151 (401)
T 4ggo_A 112 LYSVTIDGDAFSDE------IKAQVIEEAKKKGIKFDLIVYSLASP 151 (401)
T ss_dssp CCEEEEESCTTSHH------HHHHHHHHHHHTTCCEEEEEECCCCS
T ss_pred CCceeEeCCCCCHH------HHHHHHHHHHHhcCCCCEEEEecccc
Confidence 56889999999865 6666654 689999999964
No 328
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=97.60 E-value=0.00029 Score=62.78 Aligned_cols=74 Identities=14% Similarity=0.148 Sum_probs=55.1
Q ss_pred CCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCC
Q psy6053 101 TGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAE 180 (614)
Q Consensus 101 ~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~ 180 (614)
.+++|+|+|+ |.+|+.+++.|.+.|++ |+++.|.+ ++++++. ...+.++.||.+
T Consensus 5 ~~~~v~I~G~-G~iG~~la~~L~~~g~~---V~~id~~~------~~~~~~~----------------~~~~~~~~gd~~ 58 (141)
T 3llv_A 5 GRYEYIVIGS-EAAGVGLVRELTAAGKK---VLAVDKSK------EKIELLE----------------DEGFDAVIADPT 58 (141)
T ss_dssp -CCSEEEECC-SHHHHHHHHHHHHTTCC---EEEEESCH------HHHHHHH----------------HTTCEEEECCTT
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCe---EEEEECCH------HHHHHHH----------------HCCCcEEECCCC
Confidence 3578999997 99999999999999887 78888753 3333331 134678899999
Q ss_pred CCCCCCCHHHHHHH-hccccEEEEccc
Q psy6053 181 ADELAIKESDRQLL-ASEVDIMIHGAA 206 (614)
Q Consensus 181 ~~~lGLs~~~~~~l-~~~vd~ViH~AA 206 (614)
+++ .++.+ .+++|+||.+.+
T Consensus 59 ~~~------~l~~~~~~~~d~vi~~~~ 79 (141)
T 3llv_A 59 DES------FYRSLDLEGVSAVLITGS 79 (141)
T ss_dssp CHH------HHHHSCCTTCSEEEECCS
T ss_pred CHH------HHHhCCcccCCEEEEecC
Confidence 865 55554 457999998776
No 329
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=97.58 E-value=0.0002 Score=63.34 Aligned_cols=96 Identities=21% Similarity=0.217 Sum_probs=62.5
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCCC
Q psy6053 102 GKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAEA 181 (614)
Q Consensus 102 ~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~~ 181 (614)
+|+|+|+|+ |++|..+++.|.+.|++ |.++.|.+ ++++++.+ ..++.++.+|.++
T Consensus 4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~---v~~~d~~~------~~~~~~~~---------------~~~~~~~~~d~~~ 58 (140)
T 1lss_A 4 GMYIIIAGI-GRVGYTLAKSLSEKGHD---IVLIDIDK------DICKKASA---------------EIDALVINGDCTK 58 (140)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHHTTCE---EEEEESCH------HHHHHHHH---------------HCSSEEEESCTTS
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCe---EEEEECCH------HHHHHHHH---------------hcCcEEEEcCCCC
Confidence 578999986 99999999999999865 78888753 22322210 0135678899876
Q ss_pred CCCCCCHHHHHHH-hccccEEEEcccccChhHHHHHHHHHhHHHHHHHHHHHHHcCCCceEEE
Q psy6053 182 DELAIKESDRQLL-ASEVDIMIHGAATIRFDEALKKAVLLNTRGTKMMLSLAKEMKHLELFVH 243 (614)
Q Consensus 182 ~~lGLs~~~~~~l-~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~ 243 (614)
++ .+... ++++|+||++.... ..| ..+.+.++.. +.++++.
T Consensus 59 ~~------~l~~~~~~~~d~vi~~~~~~----------~~~----~~~~~~~~~~-~~~~ii~ 100 (140)
T 1lss_A 59 IK------TLEDAGIEDADMYIAVTGKE----------EVN----LMSSLLAKSY-GINKTIA 100 (140)
T ss_dssp HH------HHHHTTTTTCSEEEECCSCH----------HHH----HHHHHHHHHT-TCCCEEE
T ss_pred HH------HHHHcCcccCCEEEEeeCCc----------hHH----HHHHHHHHHc-CCCEEEE
Confidence 54 44433 56899999997531 122 2455667775 5556654
No 330
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=97.58 E-value=0.00025 Score=76.62 Aligned_cols=112 Identities=14% Similarity=0.226 Sum_probs=70.1
Q ss_pred cccccCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEE
Q psy6053 96 IGETFTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPI 175 (614)
Q Consensus 96 i~~~~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v 175 (614)
+....++++|+|+|| |++|+.+++.|++.+ .. +|++..|.. ++.+++.+ . .++..+
T Consensus 17 ~~~~l~~k~VlIiGA-GgiG~aia~~L~~~~-g~-~V~v~~R~~------~ka~~la~--------------~-~~~~~~ 72 (467)
T 2axq_A 17 IEGRHMGKNVLLLGS-GFVAQPVIDTLAAND-DI-NVTVACRTL------ANAQALAK--------------P-SGSKAI 72 (467)
T ss_dssp ------CEEEEEECC-STTHHHHHHHHHTST-TE-EEEEEESSH------HHHHHHHG--------------G-GTCEEE
T ss_pred cccCCCCCEEEEECC-hHHHHHHHHHHHhCC-CC-eEEEEECCH------HHHHHHHH--------------h-cCCcEE
Confidence 333456789999997 999999999999873 22 588888863 33333321 1 235667
Q ss_pred eCCCCCCCCCCCHHHHHHHhccccEEEEcccccChhHHHHHHHHH-------h--HHHHHHHHHHHHHcCCC
Q psy6053 176 SGDAEADELAIKESDRQLLASEVDIMIHGAATIRFDEALKKAVLL-------N--TRGTKMMLSLAKEMKHL 238 (614)
Q Consensus 176 ~gDl~~~~lGLs~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~-------N--v~gt~~ll~la~~~~~~ 238 (614)
.+|+.+.+ ++..+++++|+|||+++......-....++. | ...+.++++.|++. ++
T Consensus 73 ~~D~~d~~------~l~~~l~~~DvVIn~tp~~~~~~v~~a~l~~g~~vvd~~~~~p~~~~Ll~~Ak~a-Gv 137 (467)
T 2axq_A 73 SLDVTDDS------ALDKVLADNDVVISLIPYTFHPNVVKSAIRTKTDVVTSSYISPALRELEPEIVKA-GI 137 (467)
T ss_dssp ECCTTCHH------HHHHHHHTSSEEEECSCGGGHHHHHHHHHHHTCEEEECSCCCHHHHHHHHHHHHH-TC
T ss_pred EEecCCHH------HHHHHHcCCCEEEECCchhhhHHHHHHHHhcCCEEEEeecCCHHHHHHHHHHHHc-CC
Confidence 88988754 6778888999999998864221111122221 1 13457778888874 54
No 331
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=97.45 E-value=0.0002 Score=69.39 Aligned_cols=37 Identities=16% Similarity=0.306 Sum_probs=32.5
Q ss_pred cCCcEEEEecc----------------cccccHHHHHHHHhhCCCccEEEEEEccC
Q psy6053 100 FTGKTLFMTGA----------------SGFLGKVLLEKILRKSPNVKKIYILMRQK 139 (614)
Q Consensus 100 ~~~~~VLITGa----------------TGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~ 139 (614)
++||+|||||| ||.+|..+++.|++.|.+ |+++.|+.
T Consensus 6 l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~---V~l~~~~~ 58 (226)
T 1u7z_A 6 LKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGAN---VTLVSGPV 58 (226)
T ss_dssp TTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCE---EEEEECSC
T ss_pred CCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCE---EEEEECCc
Confidence 57999999999 799999999999999987 77777764
No 332
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=97.43 E-value=0.00019 Score=76.22 Aligned_cols=98 Identities=18% Similarity=0.202 Sum_probs=67.5
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCc-cEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCCC
Q psy6053 103 KTLFMTGASGFLGKVLLEKILRKSPNV-KKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAEA 181 (614)
Q Consensus 103 ~~VLITGaTGFlG~~Ll~~Ll~~g~~v-~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~~ 181 (614)
++|+|+|| |++|+.+++.|++.|. + .+|.+..|+. ++.+++.+ .+... ...++..+.+|+++
T Consensus 2 ~kVlIiGa-GgiG~~ia~~L~~~g~-~~~~V~v~~r~~------~~~~~la~-----~l~~~----~~~~~~~~~~D~~d 64 (405)
T 4ina_A 2 AKVLQIGA-GGVGGVVAHKMAMNRE-VFSHITLASRTL------SKCQEIAQ-----SIKAK----GYGEIDITTVDADS 64 (405)
T ss_dssp CEEEEECC-SHHHHHHHHHHHTCTT-TCCEEEEEESCH------HHHHHHHH-----HHHHT----TCCCCEEEECCTTC
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC-CceEEEEEECCH------HHHHHHHH-----Hhhhh----cCCceEEEEecCCC
Confidence 68999999 9999999999999853 3 4688888864 23332211 01000 11358889999998
Q ss_pred CCCCCCHHHHHHHhcc--ccEEEEcccccChhHHHHHHHHHhHHHHHHHHHHHHHcCCCc
Q psy6053 182 DELAIKESDRQLLASE--VDIMIHGAATIRFDEALKKAVLLNTRGTKMMLSLAKEMKHLE 239 (614)
Q Consensus 182 ~~lGLs~~~~~~l~~~--vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k 239 (614)
++ ++++++++ +|+|||+|+... . ..+++.|.+. ++.
T Consensus 65 ~~------~l~~~l~~~~~DvVin~ag~~~---~------------~~v~~a~l~~-g~~ 102 (405)
T 4ina_A 65 IE------ELVALINEVKPQIVLNIALPYQ---D------------LTIMEACLRT-GVP 102 (405)
T ss_dssp HH------HHHHHHHHHCCSEEEECSCGGG---H------------HHHHHHHHHH-TCC
T ss_pred HH------HHHHHHHhhCCCEEEECCCccc---C------------hHHHHHHHHh-CCC
Confidence 65 88888887 899999998531 1 3567778774 443
No 333
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=97.31 E-value=0.00016 Score=72.56 Aligned_cols=36 Identities=25% Similarity=0.413 Sum_probs=26.8
Q ss_pred CCcEEEEecccccccHHHHHHHHhhCCCccEEE-EEEcc
Q psy6053 101 TGKTLFMTGASGFLGKVLLEKILRKSPNVKKIY-ILMRQ 138 (614)
Q Consensus 101 ~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~-~LvR~ 138 (614)
++++|.|+|+||.+|+.+++.+++. ++. ++. +..|+
T Consensus 4 ~~mkV~V~Ga~G~mG~~~~~~~~~~-~~~-elva~~d~~ 40 (273)
T 1dih_A 4 ANIRVAIAGAGGRMGRQLIQAALAL-EGV-QLGAALERE 40 (273)
T ss_dssp CBEEEEETTTTSHHHHHHHHHHHHS-TTE-ECCCEECCT
T ss_pred CCcEEEEECCCCHHHHHHHHHHHhC-CCC-EEEEEEecC
Confidence 3578999999999999999998865 443 344 44444
No 334
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=97.18 E-value=0.00061 Score=71.24 Aligned_cols=94 Identities=14% Similarity=0.234 Sum_probs=66.3
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCCC
Q psy6053 102 GKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAEA 181 (614)
Q Consensus 102 ~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~~ 181 (614)
.|+|+|.|| |++|+.+++.|.+. ++ |.+.+|+. ++++++ .+.+..+..|+.+
T Consensus 16 ~mkilvlGa-G~vG~~~~~~L~~~-~~---v~~~~~~~------~~~~~~-----------------~~~~~~~~~d~~d 67 (365)
T 3abi_A 16 HMKVLILGA-GNIGRAIAWDLKDE-FD---VYIGDVNN------ENLEKV-----------------KEFATPLKVDASN 67 (365)
T ss_dssp CCEEEEECC-SHHHHHHHHHHTTT-SE---EEEEESCH------HHHHHH-----------------TTTSEEEECCTTC
T ss_pred ccEEEEECC-CHHHHHHHHHHhcC-CC---eEEEEcCH------HHHHHH-----------------hccCCcEEEecCC
Confidence 468999998 99999999988765 55 77777753 233322 2345677889987
Q ss_pred CCCCCCHHHHHHHhccccEEEEcccccChhHHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEeCce
Q psy6053 182 DELAIKESDRQLLASEVDIMIHGAATIRFDEALKKAVLLNTRGTKMMLSLAKEMKHLELFVHISTAY 248 (614)
Q Consensus 182 ~~lGLs~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vST~~ 248 (614)
++ .+.++++++|+||++++.. +. ..++++|.+. ++ .|+..++
T Consensus 68 ~~------~l~~~~~~~DvVi~~~p~~-~~--------------~~v~~~~~~~-g~---~yvD~s~ 109 (365)
T 3abi_A 68 FD------KLVEVMKEFELVIGALPGF-LG--------------FKSIKAAIKS-KV---DMVDVSF 109 (365)
T ss_dssp HH------HHHHHHTTCSEEEECCCGG-GH--------------HHHHHHHHHH-TC---EEEECCC
T ss_pred HH------HHHHHHhCCCEEEEecCCc-cc--------------chHHHHHHhc-Cc---ceEeeec
Confidence 65 8999999999999998653 11 2477888885 32 4555444
No 335
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=97.17 E-value=0.0007 Score=61.29 Aligned_cols=78 Identities=10% Similarity=0.178 Sum_probs=56.2
Q ss_pred CCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCC
Q psy6053 101 TGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAE 180 (614)
Q Consensus 101 ~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~ 180 (614)
.+++|+|.|+ |.+|+.+++.|.+.|++ |.++.|... ...+++.+. ...++.++.||.+
T Consensus 2 ~~~~vlI~G~-G~vG~~la~~L~~~g~~---V~vid~~~~--~~~~~~~~~----------------~~~~~~~i~gd~~ 59 (153)
T 1id1_A 2 RKDHFIVCGH-SILAINTILQLNQRGQN---VTVISNLPE--DDIKQLEQR----------------LGDNADVIPGDSN 59 (153)
T ss_dssp CCSCEEEECC-SHHHHHHHHHHHHTTCC---EEEEECCCH--HHHHHHHHH----------------HCTTCEEEESCTT
T ss_pred CCCcEEEECC-CHHHHHHHHHHHHCCCC---EEEEECCCh--HHHHHHHHh----------------hcCCCeEEEcCCC
Confidence 3568999996 99999999999999877 788887521 111222221 1235789999998
Q ss_pred CCCCCCCHHHHHHH-hccccEEEEccc
Q psy6053 181 ADELAIKESDRQLL-ASEVDIMIHGAA 206 (614)
Q Consensus 181 ~~~lGLs~~~~~~l-~~~vd~ViH~AA 206 (614)
+++ .+.++ ++++|.||-+..
T Consensus 60 ~~~------~l~~a~i~~ad~vi~~~~ 80 (153)
T 1id1_A 60 DSS------VLKKAGIDRCRAILALSD 80 (153)
T ss_dssp SHH------HHHHHTTTTCSEEEECSS
T ss_pred CHH------HHHHcChhhCCEEEEecC
Confidence 865 66665 789999997754
No 336
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=97.10 E-value=0.00033 Score=72.41 Aligned_cols=115 Identities=12% Similarity=0.066 Sum_probs=73.2
Q ss_pred cccCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeC
Q psy6053 98 ETFTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISG 177 (614)
Q Consensus 98 ~~~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~g 177 (614)
+|+++++|.|+||+|++|..++..|+..|. ..+|.++++.... ++....++.+.. .+. .++.+ .
T Consensus 4 ~~~~~~KV~ViGaaG~VG~~~a~~l~~~g~-~~evvLiDi~~~k--~~g~a~DL~~~~--------~~~---~~i~~-t- 67 (343)
T 3fi9_A 4 SYLTEEKLTIVGAAGMIGSNMAQTAAMMRL-TPNLCLYDPFAVG--LEGVAEEIRHCG--------FEG---LNLTF-T- 67 (343)
T ss_dssp CCSCSSEEEEETTTSHHHHHHHHHHHHTTC-CSCEEEECSCHHH--HHHHHHHHHHHC--------CTT---CCCEE-E-
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHhcCC-CCEEEEEeCCchh--HHHHHHhhhhCc--------CCC---CceEE-c-
Confidence 678889999999999999999999998874 2348888874311 111111111100 010 12221 1
Q ss_pred CCCCCCCCCCHHHHHHHhccccEEEEcccccC-hhHHHHHHHHHhHHHHHHHHHHHHHcCCCce
Q psy6053 178 DAEADELAIKESDRQLLASEVDIMIHGAATIR-FDEALKKAVLLNTRGTKMMLSLAKEMKHLEL 240 (614)
Q Consensus 178 Dl~~~~lGLs~~~~~~l~~~vd~ViH~AA~v~-~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~ 240 (614)
.++.+.++++|+||++||..+ ..++..+.+..|+...+.+.+.+.+. ..+.
T Consensus 68 -----------~d~~~al~dADvVvitaG~p~kpG~~R~dLl~~N~~I~~~i~~~i~~~-~p~a 119 (343)
T 3fi9_A 68 -----------SDIKEALTDAKYIVSSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKSY-CPDC 119 (343)
T ss_dssp -----------SCHHHHHTTEEEEEECCC-------CHHHHHHHHHHHHHHHHHHHHHH-CTTC
T ss_pred -----------CCHHHHhCCCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-ccCc
Confidence 145666789999999999753 23445577899999999999999885 4444
No 337
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=97.00 E-value=0.0016 Score=59.13 Aligned_cols=80 Identities=14% Similarity=0.163 Sum_probs=54.0
Q ss_pred ccccCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEe
Q psy6053 97 GETFTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPIS 176 (614)
Q Consensus 97 ~~~~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~ 176 (614)
++...+++|+|.|+ |.+|..+++.|.+.|.+ |+++.|..... +. ++ ...++.++.
T Consensus 14 ~~~~~~~~v~IiG~-G~iG~~la~~L~~~g~~---V~vid~~~~~~------~~---------~~------~~~g~~~~~ 68 (155)
T 2g1u_A 14 SKKQKSKYIVIFGC-GRLGSLIANLASSSGHS---VVVVDKNEYAF------HR---------LN------SEFSGFTVV 68 (155)
T ss_dssp ---CCCCEEEEECC-SHHHHHHHHHHHHTTCE---EEEEESCGGGG------GG---------SC------TTCCSEEEE
T ss_pred hcccCCCcEEEECC-CHHHHHHHHHHHhCCCe---EEEEECCHHHH------HH---------HH------hcCCCcEEE
Confidence 44456789999995 99999999999999865 88888864321 10 00 012456778
Q ss_pred CCCCCCCCCCCHHHHHHH-hccccEEEEcccc
Q psy6053 177 GDAEADELAIKESDRQLL-ASEVDIMIHGAAT 207 (614)
Q Consensus 177 gDl~~~~lGLs~~~~~~l-~~~vd~ViH~AA~ 207 (614)
+|..+++ .+... ++++|+||.+.+.
T Consensus 69 ~d~~~~~------~l~~~~~~~ad~Vi~~~~~ 94 (155)
T 2g1u_A 69 GDAAEFE------TLKECGMEKADMVFAFTND 94 (155)
T ss_dssp SCTTSHH------HHHTTTGGGCSEEEECSSC
T ss_pred ecCCCHH------HHHHcCcccCCEEEEEeCC
Confidence 8877643 45544 5789999998764
No 338
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=96.84 E-value=0.0048 Score=57.37 Aligned_cols=76 Identities=12% Similarity=0.134 Sum_probs=55.3
Q ss_pred cCCcEEEEecccccccHHHHHHHHhh-CCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRK-SPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGD 178 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~-g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gD 178 (614)
..+++|+|.| .|.+|..+++.|.+. |++ |+++.|.+ ++++++. ..++.++.||
T Consensus 37 ~~~~~v~IiG-~G~~G~~~a~~L~~~~g~~---V~vid~~~------~~~~~~~----------------~~g~~~~~gd 90 (183)
T 3c85_A 37 PGHAQVLILG-MGRIGTGAYDELRARYGKI---SLGIEIRE------EAAQQHR----------------SEGRNVISGD 90 (183)
T ss_dssp CTTCSEEEEC-CSHHHHHHHHHHHHHHCSC---EEEEESCH------HHHHHHH----------------HTTCCEEECC
T ss_pred CCCCcEEEEC-CCHHHHHHHHHHHhccCCe---EEEEECCH------HHHHHHH----------------HCCCCEEEcC
Confidence 3467899998 599999999999998 887 78888753 3333321 1245678899
Q ss_pred CCCCCCCCCHHHHHHH--hccccEEEEcccc
Q psy6053 179 AEADELAIKESDRQLL--ASEVDIMIHGAAT 207 (614)
Q Consensus 179 l~~~~lGLs~~~~~~l--~~~vd~ViH~AA~ 207 (614)
.++++ .+.++ ++++|+||.+.+.
T Consensus 91 ~~~~~------~l~~~~~~~~ad~vi~~~~~ 115 (183)
T 3c85_A 91 ATDPD------FWERILDTGHVKLVLLAMPH 115 (183)
T ss_dssp TTCHH------HHHTBCSCCCCCEEEECCSS
T ss_pred CCCHH------HHHhccCCCCCCEEEEeCCC
Confidence 88754 56665 6789999987653
No 339
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=96.40 E-value=0.0049 Score=58.05 Aligned_cols=35 Identities=17% Similarity=0.267 Sum_probs=30.8
Q ss_pred CCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEcc
Q psy6053 101 TGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQ 138 (614)
Q Consensus 101 ~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~ 138 (614)
.|++|+||||+|-+|..+++.+...|.+ |++..|+
T Consensus 38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~---V~~~~~~ 72 (198)
T 1pqw_A 38 PGERVLIHSATGGVGMAAVSIAKMIGAR---IYTTAGS 72 (198)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHHTCE---EEEEESS
T ss_pred CCCEEEEeeCCChHHHHHHHHHHHcCCE---EEEEeCC
Confidence 5789999999999999999999988854 8888875
No 340
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=96.16 E-value=0.042 Score=55.82 Aligned_cols=117 Identities=15% Similarity=0.097 Sum_probs=74.8
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCCCC
Q psy6053 103 KTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAEAD 182 (614)
Q Consensus 103 ~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~~~ 182 (614)
|+|.|+||+|.+|..++..|..+.+-+..+.++++.+ . ......++.+. . ...++..+.+ ++
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~--~~G~a~Dl~~~-----------~-~~~~v~~~~~--~~- 62 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-V--TPGVAVDLSHI-----------P-TAVKIKGFSG--ED- 62 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-T--HHHHHHHHHTS-----------C-SSEEEEEECS--SC-
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-C--chhHHHHhhCC-----------C-CCceEEEecC--CC-
Confidence 5799999999999999988877622235788888876 2 11112222110 0 1123333322 11
Q ss_pred CCCCCHHHHHHHhccccEEEEcccccC-hhHHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEeC
Q psy6053 183 ELAIKESDRQLLASEVDIMIHGAATIR-FDEALKKAVLLNTRGTKMMLSLAKEMKHLELFVHIST 246 (614)
Q Consensus 183 ~lGLs~~~~~~l~~~vd~ViH~AA~v~-~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vST 246 (614)
+ ...++++|+||-+|+..+ ......++++.|+.-.+.+.+.+.+. ..+.++.+-|
T Consensus 63 -------~-~~~~~~aDivii~ag~~rkpG~~R~dll~~N~~I~~~i~~~i~~~-~p~a~vlvvt 118 (312)
T 3hhp_A 63 -------A-TPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKT-CPKACIGIIT 118 (312)
T ss_dssp -------C-HHHHTTCSEEEECCSCSCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTSEEEECS
T ss_pred -------c-HHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCcEEEEec
Confidence 2 245689999999999764 34456778899999999999988885 4444444333
No 341
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=96.07 E-value=0.0094 Score=57.15 Aligned_cols=73 Identities=18% Similarity=0.185 Sum_probs=53.6
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCCCC
Q psy6053 103 KTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAEAD 182 (614)
Q Consensus 103 ~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~~~ 182 (614)
|+|+|+|+ |.+|+.+++.|.+.|++ |.++.|.+ ++++++. ...++.++.||.+++
T Consensus 1 M~iiIiG~-G~~G~~la~~L~~~g~~---v~vid~~~------~~~~~l~---------------~~~~~~~i~gd~~~~ 55 (218)
T 3l4b_C 1 MKVIIIGG-ETTAYYLARSMLSRKYG---VVIINKDR------ELCEEFA---------------KKLKATIIHGDGSHK 55 (218)
T ss_dssp CCEEEECC-HHHHHHHHHHHHHTTCC---EEEEESCH------HHHHHHH---------------HHSSSEEEESCTTSH
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCe---EEEEECCH------HHHHHHH---------------HHcCCeEEEcCCCCH
Confidence 57999996 99999999999999887 77888753 3333321 112467899999986
Q ss_pred CCCCCHHHHHHH-hccccEEEEccc
Q psy6053 183 ELAIKESDRQLL-ASEVDIMIHGAA 206 (614)
Q Consensus 183 ~lGLs~~~~~~l-~~~vd~ViH~AA 206 (614)
+ .+.++ ++++|+||-+..
T Consensus 56 ~------~l~~a~i~~ad~vi~~~~ 74 (218)
T 3l4b_C 56 E------ILRDAEVSKNDVVVILTP 74 (218)
T ss_dssp H------HHHHHTCCTTCEEEECCS
T ss_pred H------HHHhcCcccCCEEEEecC
Confidence 5 56665 678999996543
No 342
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=96.00 E-value=0.014 Score=51.81 Aligned_cols=72 Identities=24% Similarity=0.320 Sum_probs=53.7
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCCCC
Q psy6053 103 KTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAEAD 182 (614)
Q Consensus 103 ~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~~~ 182 (614)
++|+|.|+ |.+|..+++.|.+.|++ |+++.+.+ ++++++. ..++.++.||.+++
T Consensus 8 ~~viIiG~-G~~G~~la~~L~~~g~~---v~vid~~~------~~~~~~~----------------~~g~~~i~gd~~~~ 61 (140)
T 3fwz_A 8 NHALLVGY-GRVGSLLGEKLLASDIP---LVVIETSR------TRVDELR----------------ERGVRAVLGNAANE 61 (140)
T ss_dssp SCEEEECC-SHHHHHHHHHHHHTTCC---EEEEESCH------HHHHHHH----------------HTTCEEEESCTTSH
T ss_pred CCEEEECc-CHHHHHHHHHHHHCCCC---EEEEECCH------HHHHHHH----------------HcCCCEEECCCCCH
Confidence 57999996 99999999999999887 88888863 3444331 13567899999986
Q ss_pred CCCCCHHHHHHH-hccccEEEEccc
Q psy6053 183 ELAIKESDRQLL-ASEVDIMIHGAA 206 (614)
Q Consensus 183 ~lGLs~~~~~~l-~~~vd~ViH~AA 206 (614)
+ .++.+ ++++|.||-+..
T Consensus 62 ~------~l~~a~i~~ad~vi~~~~ 80 (140)
T 3fwz_A 62 E------IMQLAHLECAKWLILTIP 80 (140)
T ss_dssp H------HHHHTTGGGCSEEEECCS
T ss_pred H------HHHhcCcccCCEEEEECC
Confidence 5 45544 468999987654
No 343
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=95.96 E-value=0.013 Score=59.78 Aligned_cols=85 Identities=19% Similarity=0.146 Sum_probs=53.9
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
.++++++|+|| |-+|+.++..|.+.|. ++|++..|.++.. +|.+++.+ .+... ....+.++ ++
T Consensus 152 l~gk~~lVlGa-GG~g~aia~~L~~~Ga--~~V~i~nR~~~~~---~~a~~la~-----~~~~~----~~~~~~~~--~~ 214 (315)
T 3tnl_A 152 IIGKKMTICGA-GGAATAICIQAALDGV--KEISIFNRKDDFY---ANAEKTVE-----KINSK----TDCKAQLF--DI 214 (315)
T ss_dssp CTTSEEEEECC-SHHHHHHHHHHHHTTC--SEEEEEECSSTTH---HHHHHHHH-----HHHHH----SSCEEEEE--ET
T ss_pred ccCCEEEEECC-ChHHHHHHHHHHHCCC--CEEEEEECCCchH---HHHHHHHH-----Hhhhh----cCCceEEe--cc
Confidence 46899999997 8899999999999875 3699999985432 23332211 11110 11123333 34
Q ss_pred CCCCCCCCHHHHHHHhccccEEEEcccc
Q psy6053 180 EADELAIKESDRQLLASEVDIMIHGAAT 207 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~~vd~ViH~AA~ 207 (614)
.+. +++.+.+.++|+||++...
T Consensus 215 ~~~------~~l~~~l~~aDiIINaTp~ 236 (315)
T 3tnl_A 215 EDH------EQLRKEIAESVIFTNATGV 236 (315)
T ss_dssp TCH------HHHHHHHHTCSEEEECSST
T ss_pred chH------HHHHhhhcCCCEEEECccC
Confidence 332 2566777899999998653
No 344
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=95.80 E-value=0.017 Score=58.43 Aligned_cols=38 Identities=24% Similarity=0.418 Sum_probs=32.2
Q ss_pred cCCcE-EEEe-ccc-----------------ccccHHHHHHHHhhCCCccEEEEEEccCC
Q psy6053 100 FTGKT-LFMT-GAS-----------------GFLGKVLLEKILRKSPNVKKIYILMRQKK 140 (614)
Q Consensus 100 ~~~~~-VLIT-GaT-----------------GFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~ 140 (614)
.+|++ |||| ||| |-+|..+++.++++|++ |..+.|+.+
T Consensus 34 l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~---V~lv~g~~s 90 (313)
T 1p9o_A 34 AQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYG---VLFLYRARS 90 (313)
T ss_dssp HTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCE---EEEEEETTS
T ss_pred hcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCE---EEEEecCCC
Confidence 46777 9999 567 99999999999999987 778888654
No 345
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=95.64 E-value=0.11 Score=52.93 Aligned_cols=117 Identities=15% Similarity=0.090 Sum_probs=75.0
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCCC
Q psy6053 102 GKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAEA 181 (614)
Q Consensus 102 ~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~~ 181 (614)
.++|.|+|+ |.+|..++..|+..|. +..|.++++.. ++++.... .+.+..|- ....+.+..+|.
T Consensus 5 ~~kI~ViGa-G~vG~~~a~~l~~~~~-~~~l~l~D~~~------~k~~g~a~-----DL~~~~~~-~~~~v~i~~~~~-- 68 (326)
T 3pqe_A 5 VNKVALIGA-GFVGSSYAFALINQGI-TDELVVIDVNK------EKAMGDVM-----DLNHGKAF-APQPVKTSYGTY-- 68 (326)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECSCH------HHHHHHHH-----HHHHTGGG-SSSCCEEEEECG--
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCC-CceEEEEecch------HHHHHHHH-----HHHhcccc-ccCCeEEEeCcH--
Confidence 578999996 9999999999999875 34688888742 22221000 01111111 112344444432
Q ss_pred CCCCCCHHHHHHHhccccEEEEcccccC-hhHHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEeC
Q psy6053 182 DELAIKESDRQLLASEVDIMIHGAATIR-FDEALKKAVLLNTRGTKMMLSLAKEMKHLELFVHIST 246 (614)
Q Consensus 182 ~~lGLs~~~~~~l~~~vd~ViH~AA~v~-~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vST 246 (614)
+.++++|+||.+|+..+ ..++..+.+..|+.-.+.+.+.+.+. ..+.++.+-|
T Consensus 69 -----------~a~~~aDvVvi~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~-~p~a~vlvvt 122 (326)
T 3pqe_A 69 -----------EDCKDADIVCICAGANQKPGETRLELVEKNLKIFKGIVSEVMAS-GFDGIFLVAT 122 (326)
T ss_dssp -----------GGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHT-TCCSEEEECS
T ss_pred -----------HHhCCCCEEEEecccCCCCCccHHHHHHHHHHHHHHHHHHHHHh-cCCeEEEEcC
Confidence 24578999999999754 23445677899999999999999885 4455554443
No 346
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=95.60 E-value=0.0047 Score=58.84 Aligned_cols=34 Identities=24% Similarity=0.313 Sum_probs=29.8
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEEccC
Q psy6053 103 KTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQK 139 (614)
Q Consensus 103 ~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~ 139 (614)
|+|+|+||+|++|+.+++.|++.|++ |++..|+.
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g~~---V~~~~r~~ 34 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLGHE---IVVGSRRE 34 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCE---EEEEESSH
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCE---EEEEeCCH
Confidence 57999999999999999999999865 88888863
No 347
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=95.59 E-value=0.013 Score=60.99 Aligned_cols=72 Identities=17% Similarity=0.265 Sum_probs=53.0
Q ss_pred CCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCC
Q psy6053 101 TGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAE 180 (614)
Q Consensus 101 ~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~ 180 (614)
++++|+|.|+ |++|+.+++.|++. . +|.+..|+. +|.+++. .+...+..|+.
T Consensus 15 ~~~~v~IiGa-G~iG~~ia~~L~~~-~---~V~V~~R~~------~~a~~la-----------------~~~~~~~~d~~ 66 (365)
T 2z2v_A 15 RHMKVLILGA-GNIGRAIAWDLKDE-F---DVYIGDVNN------ENLEKVK-----------------EFATPLKVDAS 66 (365)
T ss_dssp -CCEEEEECC-SHHHHHHHHHHTTT-S---EEEEEESCH------HHHHHHT-----------------TTSEEEECCTT
T ss_pred CCCeEEEEcC-CHHHHHHHHHHHcC-C---eEEEEECCH------HHHHHHH-----------------hhCCeEEEecC
Confidence 4689999996 99999999999987 3 488888863 3444331 22345667876
Q ss_pred CCCCCCCHHHHHHHhccccEEEEccc
Q psy6053 181 ADELAIKESDRQLLASEVDIMIHGAA 206 (614)
Q Consensus 181 ~~~lGLs~~~~~~l~~~vd~ViH~AA 206 (614)
+.+ +++++++++|+||+|..
T Consensus 67 ~~~------~l~~ll~~~DvVIn~~P 86 (365)
T 2z2v_A 67 NFD------KLVEVMKEFELVIGALP 86 (365)
T ss_dssp CHH------HHHHHHTTCSCEEECCC
T ss_pred CHH------HHHHHHhCCCEEEECCC
Confidence 643 78899999999999854
No 348
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=95.51 E-value=0.028 Score=55.21 Aligned_cols=115 Identities=11% Similarity=0.153 Sum_probs=69.5
Q ss_pred ccCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCH-------------HHHHHHHHhChhhHHhhhhcc
Q psy6053 99 TFTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNA-------------RQRIEELFASPLFNLLKSVHG 165 (614)
Q Consensus 99 ~~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~-------------~~Rl~~~~~~~~f~~l~~~~p 165 (614)
..++++|+|.|+ |-+|+.+++.|.+.| +.+|.++++..-..+- +.|.+.+ -++++...|
T Consensus 28 ~l~~~~VlVvG~-Gg~G~~va~~La~~G--v~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~-----~~~l~~~np 99 (249)
T 1jw9_B 28 ALKDSRVLIVGL-GGLGCAASQYLASAG--VGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESA-----RDALTRINP 99 (249)
T ss_dssp HHHHCEEEEECC-SHHHHHHHHHHHHHT--CSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHH-----HHHHHHHCT
T ss_pred HHhCCeEEEEee-CHHHHHHHHHHHHcC--CCeEEEEcCCCcccccCCcccccChhhcCcHHHHHH-----HHHHHHHCC
Confidence 355789999995 779999999999998 4578888887511000 0111111 112222233
Q ss_pred ccccCeEEEEeCCCCCCCCCCCHHHHHHHhccccEEEEcccccChhHHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEe
Q psy6053 166 QKIIDKVLPISGDAEADELAIKESDRQLLASEVDIMIHGAATIRFDEALKKAVLLNTRGTKMMLSLAKEMKHLELFVHIS 245 (614)
Q Consensus 166 ~~~~~~v~~v~gDl~~~~lGLs~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vS 245 (614)
. -+++.+..++++ +...++++++|+||.+... +.. -..+.++|++. + +++|+.+
T Consensus 100 ~---~~v~~~~~~~~~-------~~~~~~~~~~DvVi~~~d~--~~~------------~~~l~~~~~~~-~-~p~i~~~ 153 (249)
T 1jw9_B 100 H---IAITPVNALLDD-------AELAALIAEHDLVLDCTDN--VAV------------RNQLNAGCFAA-K-VPLVSGA 153 (249)
T ss_dssp T---SEEEEECSCCCH-------HHHHHHHHTSSEEEECCSS--HHH------------HHHHHHHHHHH-T-CCEEEEE
T ss_pred C---cEEEEEeccCCH-------hHHHHHHhCCCEEEEeCCC--HHH------------HHHHHHHHHHc-C-CCEEEee
Confidence 3 356777776653 3567778899999988643 111 13355667764 3 4677765
Q ss_pred Cc
Q psy6053 246 TA 247 (614)
Q Consensus 246 T~ 247 (614)
+.
T Consensus 154 ~~ 155 (249)
T 1jw9_B 154 AI 155 (249)
T ss_dssp EE
T ss_pred ec
Confidence 44
No 349
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=95.38 E-value=0.037 Score=54.40 Aligned_cols=115 Identities=8% Similarity=0.101 Sum_probs=68.6
Q ss_pred ccCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCH-------------HHHHHHHHhChhhHHhhhhcc
Q psy6053 99 TFTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNA-------------RQRIEELFASPLFNLLKSVHG 165 (614)
Q Consensus 99 ~~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~-------------~~Rl~~~~~~~~f~~l~~~~p 165 (614)
..++++|+|.|+ |-+|+.+++.|.+.| |.+|.+.++..-..+- +.|.+. .-+++++..|
T Consensus 25 ~l~~~~VlvvG~-GglG~~va~~La~~G--vg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~-----~~~~l~~~np 96 (251)
T 1zud_1 25 KLLDSQVLIIGL-GGLGTPAALYLAGAG--VGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQV-----SQQRLTQLNP 96 (251)
T ss_dssp HHHTCEEEEECC-STTHHHHHHHHHHTT--CSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHH-----HHHHHHHHCT
T ss_pred HHhcCcEEEEcc-CHHHHHHHHHHHHcC--CCeEEEEeCCCcccccCCCCccCChhhCCCHHHHH-----HHHHHHHHCC
Confidence 356789999997 559999999999998 5578887654311000 001111 1112333333
Q ss_pred ccccCeEEEEeCCCCCCCCCCCHHHHHHHhccccEEEEcccccChhHHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEe
Q psy6053 166 QKIIDKVLPISGDAEADELAIKESDRQLLASEVDIMIHGAATIRFDEALKKAVLLNTRGTKMMLSLAKEMKHLELFVHIS 245 (614)
Q Consensus 166 ~~~~~~v~~v~gDl~~~~lGLs~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vS 245 (614)
. -+++.+..+++. +....+++++|+||.+... +.. -..+-++|.+. + +++|+.+
T Consensus 97 ~---~~v~~~~~~~~~-------~~~~~~~~~~DvVi~~~d~--~~~------------r~~l~~~~~~~-~-~p~i~~~ 150 (251)
T 1zud_1 97 D---IQLTALQQRLTG-------EALKDAVARADVVLDCTDN--MAT------------RQEINAACVAL-N-TPLITAS 150 (251)
T ss_dssp T---SEEEEECSCCCH-------HHHHHHHHHCSEEEECCSS--HHH------------HHHHHHHHHHT-T-CCEEEEE
T ss_pred C---CEEEEEeccCCH-------HHHHHHHhcCCEEEECCCC--HHH------------HHHHHHHHHHh-C-CCEEEEe
Confidence 3 456666665543 4577788899999987542 211 12355667763 3 5678776
Q ss_pred Cc
Q psy6053 246 TA 247 (614)
Q Consensus 246 T~ 247 (614)
+.
T Consensus 151 ~~ 152 (251)
T 1zud_1 151 AV 152 (251)
T ss_dssp EE
T ss_pred cc
Confidence 54
No 350
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=95.27 E-value=0.069 Score=54.55 Aligned_cols=117 Identities=13% Similarity=0.070 Sum_probs=64.8
Q ss_pred CCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCC
Q psy6053 101 TGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAE 180 (614)
Q Consensus 101 ~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~ 180 (614)
.+++|.|+|| |.+|..++..|+..+. +..|.++++.. ++++.... .+.+..+ ....+.+..+|.
T Consensus 8 ~~~kV~ViGa-G~vG~~~a~~l~~~~~-~~el~l~D~~~------~k~~g~a~-----DL~~~~~--~~~~~~i~~~~~- 71 (326)
T 3vku_A 8 DHQKVILVGD-GAVGSSYAYAMVLQGI-AQEIGIVDIFK------DKTKGDAI-----DLEDALP--FTSPKKIYSAEY- 71 (326)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECSCH------HHHHHHHH-----HHHTTGG--GSCCCEEEECCG-
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCC-CCeEEEEeCCh------HHHHHHHh-----hHhhhhh--hcCCcEEEECcH-
Confidence 4578999996 9999999999998865 35788888742 22221100 0111111 112344444432
Q ss_pred CCCCCCCHHHHHHHhccccEEEEcccccC-hhHHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEeC
Q psy6053 181 ADELAIKESDRQLLASEVDIMIHGAATIR-FDEALKKAVLLNTRGTKMMLSLAKEMKHLELFVHIST 246 (614)
Q Consensus 181 ~~~lGLs~~~~~~l~~~vd~ViH~AA~v~-~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vST 246 (614)
+.++++|+||++|+..+ ..++..++++.|+.-.+.+.+.+.+. ..+.++.+-|
T Consensus 72 ------------~a~~~aDiVvi~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~-~p~a~ilvvt 125 (326)
T 3vku_A 72 ------------SDAKDADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDS-GFNGIFLVAA 125 (326)
T ss_dssp ------------GGGTTCSEEEECCCCC----------------CHHHHHHHHHTT-TCCSEEEECS
T ss_pred ------------HHhcCCCEEEECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhc-CCceEEEEcc
Confidence 23678999999999754 23445567889999999999998885 4455554433
No 351
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=95.22 E-value=0.15 Score=52.48 Aligned_cols=117 Identities=19% Similarity=0.104 Sum_probs=72.7
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCc-----cEEEEEEccCCCcCHHHHHH----HHHhChhhHHhhhhccccccC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNV-----KKIYILMRQKKGKNARQRIE----ELFASPLFNLLKSVHGQKIID 170 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v-----~~V~~LvR~~~~~~~~~Rl~----~~~~~~~f~~l~~~~p~~~~~ 170 (614)
.+.-+|.||||+|.+|..|+-.|... +=+ ..+.+++..+.. ..++ ++-... ...
T Consensus 22 ~~~vKVaViGAaG~IG~~la~~la~~-~l~~~~~~~eL~L~Di~~~~----~~~~Gva~DL~~~~------------~~~ 84 (345)
T 4h7p_A 22 MSAVKVAVTGAAGQIGYALVPLIARG-ALLGPTTPVELRLLDIEPAL----KALAGVEAELEDCA------------FPL 84 (345)
T ss_dssp CCCEEEEEESTTSHHHHHHHHHHHHT-TTTCTTCCEEEEEECCGGGH----HHHHHHHHHHHHTT------------CTT
T ss_pred CCCCEEEEECcCcHHHHHHHHHHHhc-cccCCCCccEEEEECCCCcc----ccchhhhhhhhhcC------------ccC
Confidence 34468999999999999998877654 211 257777765421 2222 111110 111
Q ss_pred eEEEEeCCCCCCCCCCCHHHHHHHhccccEEEEcccccC-hhHHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEE
Q psy6053 171 KVLPISGDAEADELAIKESDRQLLASEVDIMIHGAATIR-FDEALKKAVLLNTRGTKMMLSLAKEMKHLELFVHI 244 (614)
Q Consensus 171 ~v~~v~gDl~~~~lGLs~~~~~~l~~~vd~ViH~AA~v~-~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~v 244 (614)
....+.++ +....++++|+||=+||..+ ...+..++++.|..-.+.+.+...+......+|.+
T Consensus 85 ~~~~~~~~-----------~~~~a~~~advVvi~aG~prkpGmtR~DLl~~Na~I~~~~~~~i~~~a~~~~~vlv 148 (345)
T 4h7p_A 85 LDKVVVTA-----------DPRVAFDGVAIAIMCGAFPRKAGMERKDLLEMNARIFKEQGEAIAAVAASDCRVVV 148 (345)
T ss_dssp EEEEEEES-----------CHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred CCcEEEcC-----------ChHHHhCCCCEEEECCCCCCCCCCCHHHHHHHhHHHHHHHHHHHHhhccCceEEEE
Confidence 22223222 23456789999999999764 34566788999999999999988774333344443
No 352
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=95.18 E-value=0.037 Score=56.57 Aligned_cols=37 Identities=11% Similarity=0.205 Sum_probs=31.9
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQK 139 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~ 139 (614)
-.+++|+||||+|.+|..+++.+...|. +|++..|+.
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G~---~Vi~~~~~~ 180 (333)
T 1wly_A 144 KPGDYVLIHAAAGGMGHIMVPWARHLGA---TVIGTVSTE 180 (333)
T ss_dssp CTTCEEEETTTTSTTHHHHHHHHHHTTC---EEEEEESSH
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCC---EEEEEeCCH
Confidence 4578999999999999999999988875 488888863
No 353
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=95.08 E-value=0.048 Score=55.72 Aligned_cols=37 Identities=19% Similarity=0.191 Sum_probs=31.7
Q ss_pred ccCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEcc
Q psy6053 99 TFTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQ 138 (614)
Q Consensus 99 ~~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~ 138 (614)
.-.|++|+||||+|-+|..+++.+...|.+ |++..|+
T Consensus 143 ~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~---V~~~~~~ 179 (333)
T 1v3u_A 143 VKGGETVLVSAAAGAVGSVVGQIAKLKGCK---VVGAAGS 179 (333)
T ss_dssp CCSSCEEEEESTTBHHHHHHHHHHHHTTCE---EEEEESS
T ss_pred CCCCCEEEEecCCCcHHHHHHHHHHHCCCE---EEEEeCC
Confidence 345899999999999999999999888754 8888875
No 354
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=95.07 E-value=0.035 Score=56.61 Aligned_cols=36 Identities=8% Similarity=0.063 Sum_probs=31.6
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEcc
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQ 138 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~ 138 (614)
-.|++|+||||+|.+|..+++.+...|.+ |++..|+
T Consensus 139 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~---V~~~~~~ 174 (327)
T 1qor_A 139 KPDEQFLFHAAAGGVGLIACQWAKALGAK---LIGTVGT 174 (327)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHHTCE---EEEEESS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCE---EEEEeCC
Confidence 45889999999999999999999988854 8888886
No 355
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=95.06 E-value=0.024 Score=58.50 Aligned_cols=37 Identities=16% Similarity=0.239 Sum_probs=31.7
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQK 139 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~ 139 (614)
-.|++||||||+|-+|..+++.+...|. +|++..|+.
T Consensus 168 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga---~V~~~~~~~ 204 (347)
T 2hcy_A 168 MAGHWVAISGAAGGLGSLAVQYAKAMGY---RVLGIDGGE 204 (347)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECST
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---cEEEEcCCH
Confidence 4578999999999999999998888875 488888864
No 356
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=95.01 E-value=0.018 Score=60.15 Aligned_cols=77 Identities=14% Similarity=0.193 Sum_probs=52.4
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
..+++|+|+|+ |-+|..+++.+...|.+ |++..|+. +|++...+ . .... +.+|.
T Consensus 164 l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~---V~~~d~~~------~~~~~~~~---------~----~g~~---~~~~~ 217 (369)
T 2eez_A 164 VAPASVVILGG-GTVGTNAAKIALGMGAQ---VTILDVNH------KRLQYLDD---------V----FGGR---VITLT 217 (369)
T ss_dssp BCCCEEEEECC-SHHHHHHHHHHHHTTCE---EEEEESCH------HHHHHHHH---------H----TTTS---EEEEE
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCE---EEEEECCH------HHHHHHHH---------h----cCce---EEEec
Confidence 56799999999 99999999999999864 88888863 23322211 0 1111 23444
Q ss_pred CCCCCCCCHHHHHHHhccccEEEEccccc
Q psy6053 180 EADELAIKESDRQLLASEVDIMIHGAATI 208 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~~vd~ViH~AA~v 208 (614)
++. ++++++++++|+||++++..
T Consensus 218 ~~~------~~l~~~~~~~DvVi~~~g~~ 240 (369)
T 2eez_A 218 ATE------ANIKKSVQHADLLIGAVLVP 240 (369)
T ss_dssp CCH------HHHHHHHHHCSEEEECCC--
T ss_pred CCH------HHHHHHHhCCCEEEECCCCC
Confidence 443 36778888999999998853
No 357
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=94.94 E-value=0.037 Score=57.23 Aligned_cols=37 Identities=24% Similarity=0.424 Sum_probs=28.8
Q ss_pred CCcEEEEecccccccHHHHHHHHhhCC----CccEEEEEEcc
Q psy6053 101 TGKTLFMTGASGFLGKVLLEKILRKSP----NVKKIYILMRQ 138 (614)
Q Consensus 101 ~~~~VLITGaTGFlG~~Ll~~Ll~~g~----~v~~V~~LvR~ 138 (614)
+.++|+|.||||.+|+.|++.|+++++ ++ +|.++.+.
T Consensus 8 ~m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~-ei~~l~s~ 48 (352)
T 2nqt_A 8 NATKVAVAGASGYAGGEILRLLLGHPAYADGRL-RIGALTAA 48 (352)
T ss_dssp SCEEEEEETTTSHHHHHHHHHHHTCHHHHTTSE-EEEEEEES
T ss_pred cCCEEEEECCCCHHHHHHHHHHHcCCCCCCccE-EEEEEECC
Confidence 357999999999999999999987631 43 46777654
No 358
>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1
Probab=94.90 E-value=0.019 Score=59.25 Aligned_cols=34 Identities=18% Similarity=0.353 Sum_probs=27.9
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEE
Q psy6053 103 KTLFMTGASGFLGKVLLEKILRKSPNVKKIYILM 136 (614)
Q Consensus 103 ~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~Lv 136 (614)
++|+|.||||.+|+.+++.|+++++....|.++.
T Consensus 7 ~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~ 40 (340)
T 2hjs_A 7 LNVAVVGATGSVGEALVGLLDERDFPLHRLHLLA 40 (340)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEE
T ss_pred cEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEe
Confidence 6799999999999999999987665545566665
No 359
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=94.84 E-value=0.13 Score=51.49 Aligned_cols=120 Identities=15% Similarity=0.213 Sum_probs=70.8
Q ss_pred cccCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhC---------hhhHHhhhhccccc
Q psy6053 98 ETFTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFAS---------PLFNLLKSVHGQKI 168 (614)
Q Consensus 98 ~~~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~---------~~f~~l~~~~p~~~ 168 (614)
+..++++|+|.|+ |-+|+.+++.|.+.| |.+|.+.++..=..+...|. ++.. ..-+++++-+|+
T Consensus 32 ~kL~~~~VlVvGa-GGlGs~va~~La~aG--VG~i~lvD~D~Ve~sNL~Rq--~~~~~diG~~Ka~aa~~~L~~iNP~-- 104 (292)
T 3h8v_A 32 EKIRTFAVAIVGV-GGVGSVTAEMLTRCG--IGKLLLFDYDKVELANMNRL--FFQPHQAGLSKVQAAEHTLRNINPD-- 104 (292)
T ss_dssp CGGGGCEEEEECC-SHHHHHHHHHHHHHT--CSEEEEECCCBC--------------CCTTSBHHHHHHHHHHHHCTT--
T ss_pred HHHhCCeEEEECc-CHHHHHHHHHHHHcC--CCEEEEECCCccChhhcccc--cCChhhcCchHHHHHHHHHHhhCCC--
Confidence 4466789999995 669999999999998 66898888765333223331 1110 112234444454
Q ss_pred cCeEEEEeCCCCCCCCCCCHHHHHHHh-----------ccccEEEEcccccChhHHHHHHHHHhHHHHHHHHHHHHHcCC
Q psy6053 169 IDKVLPISGDAEADELAIKESDRQLLA-----------SEVDIMIHGAATIRFDEALKKAVLLNTRGTKMMLSLAKEMKH 237 (614)
Q Consensus 169 ~~~v~~v~gDl~~~~lGLs~~~~~~l~-----------~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~ 237 (614)
-+++.+..+++..+ .++.++ +++|+|+.+.-. +... ..+-++|.+. +
T Consensus 105 -v~v~~~~~~l~~~~------~~~~~~~~~~~~~l~~~~~~DlVid~~Dn--~~~R------------~~in~~c~~~-~ 162 (292)
T 3h8v_A 105 -VLFEVHNYNITTVE------NFQHFMDRISNGGLEEGKPVDLVLSCVDN--FEAR------------MTINTACNEL-G 162 (292)
T ss_dssp -SEEEEECCCTTSHH------HHHHHHHHHHHBSSSTTBCCSEEEECCSS--HHHH------------HHHHHHHHHH-T
T ss_pred -cEEEEecccCCcHH------HHHHHhhhhcccccccCCCCCEEEECCcc--hhhh------------hHHHHHHHHh-C
Confidence 56777877777532 445443 589999977432 2211 2355677774 3
Q ss_pred CceEEEEeCc
Q psy6053 238 LELFVHISTA 247 (614)
Q Consensus 238 ~k~~V~vST~ 247 (614)
+++|+.+..
T Consensus 163 -~Pli~~gv~ 171 (292)
T 3h8v_A 163 -QTWMESGVS 171 (292)
T ss_dssp -CCEEEEEEC
T ss_pred -CCEEEeeee
Confidence 578876653
No 360
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=94.62 E-value=0.12 Score=52.63 Aligned_cols=117 Identities=12% Similarity=0.082 Sum_probs=71.9
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCCC
Q psy6053 102 GKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAEA 181 (614)
Q Consensus 102 ~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~~ 181 (614)
.++|.|+|| |.+|..++-.|+..+. +.+|.++++.+...... ..++.+ ..+ ....+.+..+|
T Consensus 7 ~~KI~IiGa-G~vG~~~a~~l~~~~~-~~ev~L~Di~~~~~~g~--~~dl~~---------~~~--~~~~~~i~~~~--- 68 (318)
T 1y6j_A 7 RSKVAIIGA-GFVGASAAFTMALRQT-ANELVLIDVFKEKAIGE--AMDINH---------GLP--FMGQMSLYAGD--- 68 (318)
T ss_dssp CCCEEEECC-SHHHHHHHHHHHHTTC-SSEEEEECCC---CCHH--HHHHTT---------SCC--CTTCEEEC--C---
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCC-CCEEEEEeCChHHHHHH--HHHHHH---------hHH--hcCCeEEEECC---
Confidence 468999998 9999999999998865 46799998875433221 111111 001 11233332221
Q ss_pred CCCCCCHHHHHHHhccccEEEEcccccC-hhHHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEeCc
Q psy6053 182 DELAIKESDRQLLASEVDIMIHGAATIR-FDEALKKAVLLNTRGTKMMLSLAKEMKHLELFVHISTA 247 (614)
Q Consensus 182 ~~lGLs~~~~~~l~~~vd~ViH~AA~v~-~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vST~ 247 (614)
+ +.++++|+||.+|+... ......+....|+.-.+.+.+.+.+. ....++.+.|-
T Consensus 69 ---------~-~a~~~aDvVii~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~viv~tN 124 (318)
T 1y6j_A 69 ---------Y-SDVKDCDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKY-YNHGVILVVSN 124 (318)
T ss_dssp ---------G-GGGTTCSEEEECCCC------CHHHHHHHHHHHHHHHHHHHHHH-CCSCEEEECSS
T ss_pred ---------H-HHhCCCCEEEEcCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHh-CCCcEEEEecC
Confidence 1 23689999999998754 22334466788999999999999885 45666666554
No 361
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=94.38 E-value=0.058 Score=55.74 Aligned_cols=38 Identities=5% Similarity=0.055 Sum_probs=32.1
Q ss_pred ccCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccC
Q psy6053 99 TFTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQK 139 (614)
Q Consensus 99 ~~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~ 139 (614)
.-.|++|+||||+|-+|..+++.+...|. +|++.+|+.
T Consensus 160 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga---~Vi~~~~~~ 197 (354)
T 2j8z_A 160 VQAGDYVLIHAGLSGVGTAAIQLTRMAGA---IPLVTAGSQ 197 (354)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTC---EEEEEESCH
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHcCC---EEEEEeCCH
Confidence 34588999999999999999999988875 488888863
No 362
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=94.36 E-value=0.056 Score=54.89 Aligned_cols=38 Identities=24% Similarity=0.340 Sum_probs=32.3
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKK 140 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~ 140 (614)
.++++++|+|| |-.|+.++..|.+.|. ++|++..|.+.
T Consensus 146 l~gk~~lVlGA-GGaaraia~~L~~~G~--~~v~v~nRt~~ 183 (312)
T 3t4e_A 146 MRGKTMVLLGA-GGAATAIGAQAAIEGI--KEIKLFNRKDD 183 (312)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTC--SEEEEEECSST
T ss_pred cCCCEEEEECc-CHHHHHHHHHHHHcCC--CEEEEEECCCc
Confidence 46899999997 8899999999999874 46999999743
No 363
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=94.24 E-value=0.06 Score=55.57 Aligned_cols=37 Identities=22% Similarity=0.190 Sum_probs=31.7
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQK 139 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~ 139 (614)
-.|++|+||||+|-+|..+++.+...|. +|++.+|++
T Consensus 169 ~~g~~vlV~GasggiG~~~~~~a~~~Ga---~Vi~~~~~~ 205 (351)
T 1yb5_A 169 KAGESVLVHGASGGVGLAACQIARAYGL---KILGTAGTE 205 (351)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTC---EEEEEESSH
T ss_pred CCcCEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCh
Confidence 4588999999999999999998888875 488888863
No 364
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=94.15 E-value=0.021 Score=56.89 Aligned_cols=38 Identities=29% Similarity=0.522 Sum_probs=29.8
Q ss_pred CCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccC
Q psy6053 101 TGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQK 139 (614)
Q Consensus 101 ~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~ 139 (614)
+.++|.|.||+|.+|+.+++.+.+. +++.-|-+++|+.
T Consensus 6 ~mikV~V~Ga~G~MG~~i~~~l~~~-~~~eLv~~~d~~~ 43 (272)
T 4f3y_A 6 SSMKIAIAGASGRMGRMLIEAVLAA-PDATLVGALDRTG 43 (272)
T ss_dssp CCEEEEESSTTSHHHHHHHHHHHHC-TTEEEEEEBCCTT
T ss_pred cccEEEEECCCCHHHHHHHHHHHhC-CCCEEEEEEEecC
Confidence 3578999999999999999999876 6654444566654
No 365
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=94.13 E-value=0.11 Score=53.59 Aligned_cols=37 Identities=22% Similarity=0.186 Sum_probs=31.3
Q ss_pred cCC--cEEEEecccccccHHHHHHHHhhCCCccEEEEEEcc
Q psy6053 100 FTG--KTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQ 138 (614)
Q Consensus 100 ~~~--~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~ 138 (614)
-.| ++||||||+|-+|..+++.+...|. .+|++..|+
T Consensus 157 ~~g~~~~vlI~GasggiG~~~~~~a~~~Ga--~~Vi~~~~~ 195 (357)
T 2zb4_A 157 TAGSNKTMVVSGAAGACGSVAGQIGHFLGC--SRVVGICGT 195 (357)
T ss_dssp CTTSCCEEEESSTTBHHHHHHHHHHHHTTC--SEEEEEESC
T ss_pred CCCCccEEEEECCCcHHHHHHHHHHHHCCC--CeEEEEeCC
Confidence 357 8999999999999999998888875 258888885
No 366
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=94.05 E-value=0.056 Score=55.50 Aligned_cols=37 Identities=16% Similarity=0.166 Sum_probs=31.5
Q ss_pred ccCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEcc
Q psy6053 99 TFTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQ 138 (614)
Q Consensus 99 ~~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~ 138 (614)
.-.|++||||||+|-+|..+++.+...|. +|++..|+
T Consensus 153 ~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~---~V~~~~~~ 189 (345)
T 2j3h_A 153 PKEGETVYVSAASGAVGQLVGQLAKMMGC---YVVGSAGS 189 (345)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTC---EEEEEESS
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCC
Confidence 34589999999999999999998888875 48888886
No 367
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=93.99 E-value=0.1 Score=53.62 Aligned_cols=37 Identities=5% Similarity=0.039 Sum_probs=31.4
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQK 139 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~ 139 (614)
-.+++|||+||+|-+|..+++.+...|. +|++.+|+.
T Consensus 165 ~~g~~vlV~Gasg~iG~~~~~~a~~~G~---~Vi~~~~~~ 201 (343)
T 2eih_A 165 RPGDDVLVMAAGSGVSVAAIQIAKLFGA---RVIATAGSE 201 (343)
T ss_dssp CTTCEEEECSTTSTTHHHHHHHHHHTTC---EEEEEESSH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCCH
Confidence 3578999999999999999998888875 488888863
No 368
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=93.96 E-value=0.065 Score=55.03 Aligned_cols=38 Identities=18% Similarity=0.345 Sum_probs=32.0
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKK 140 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~ 140 (614)
-.|++|||+||+|-+|...++.+...|. +|++.+|+..
T Consensus 158 ~~g~~VlV~Gasg~iG~~~~~~a~~~Ga---~Vi~~~~~~~ 195 (342)
T 4eye_A 158 RAGETVLVLGAAGGIGTAAIQIAKGMGA---KVIAVVNRTA 195 (342)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTC---EEEEEESSGG
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCC---EEEEEeCCHH
Confidence 4588999999999999999988888875 4888888653
No 369
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=93.96 E-value=0.15 Score=52.70 Aligned_cols=123 Identities=11% Similarity=0.099 Sum_probs=73.5
Q ss_pred ccccCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHH--------HHHHhChhhHHhhhhccccc
Q psy6053 97 GETFTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRI--------EELFASPLFNLLKSVHGQKI 168 (614)
Q Consensus 97 ~~~~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl--------~~~~~~~~f~~l~~~~p~~~ 168 (614)
++..++++|+|.|+ |-+|+.+++.|.+.| |.+|.++++..-..+-..|- .+......-+++++.+|+
T Consensus 113 q~~L~~~~VlvvG~-GglGs~va~~La~aG--vg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~-- 187 (353)
T 3h5n_A 113 QDKLKNAKVVILGC-GGIGNHVSVILATSG--IGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSE-- 187 (353)
T ss_dssp HHHHHTCEEEEECC-SHHHHHHHHHHHHHT--CSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTT--
T ss_pred HHHHhCCeEEEECC-CHHHHHHHHHHHhCC--CCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCC--
Confidence 55567889999996 669999999999998 66899888764211100000 000000011233333444
Q ss_pred cCeEEEEeCCCCCCCCCCCHHHHHHHhccccEEEEcccccChhHHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEeCc
Q psy6053 169 IDKVLPISGDAEADELAIKESDRQLLASEVDIMIHGAATIRFDEALKKAVLLNTRGTKMMLSLAKEMKHLELFVHISTA 247 (614)
Q Consensus 169 ~~~v~~v~gDl~~~~lGLs~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vST~ 247 (614)
-+++.+..+++..+ +... ++++|+||.+.-.. ... -..+-++|.+. + +++|+.+..
T Consensus 188 -v~v~~~~~~i~~~~------~~~~-~~~~DlVvd~~Dn~--~~~-----------r~~ln~~c~~~-~-~p~i~~~~~ 243 (353)
T 3h5n_A 188 -ISVSEIALNINDYT------DLHK-VPEADIWVVSADHP--FNL-----------INWVNKYCVRA-N-QPYINAGYV 243 (353)
T ss_dssp -SEEEEEECCCCSGG------GGGG-SCCCSEEEECCCCS--TTH-----------HHHHHHHHHHT-T-CCEEEEEEE
T ss_pred -CeEEEeecccCchh------hhhH-hccCCEEEEecCCh--HHH-----------HHHHHHHHHHh-C-CCEEEEEEe
Confidence 57888888887654 2444 78999999975332 210 02244677774 4 577776653
No 370
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=93.92 E-value=0.095 Score=52.71 Aligned_cols=115 Identities=17% Similarity=0.038 Sum_probs=72.3
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHH-HHhChhhHHhhhhccccccCeEEEE-eCCCC
Q psy6053 103 KTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEE-LFASPLFNLLKSVHGQKIIDKVLPI-SGDAE 180 (614)
Q Consensus 103 ~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~-~~~~~~f~~l~~~~p~~~~~~v~~v-~gDl~ 180 (614)
|+|.|+|| |.+|..++..|+..|. +.+|.+.++.+. +++. .++ +.+..+. ......+. ..|
T Consensus 1 MkI~ViGa-G~vG~~la~~l~~~~~-~~~v~L~D~~~~------~~~g~~~d------l~~~~~~-~~~~~~i~~t~d-- 63 (294)
T 1oju_A 1 MKLGFVGA-GRVGSTSAFTCLLNLD-VDEIALVDIAED------LAVGEAMD------LAHAAAG-IDKYPKIVGGAD-- 63 (294)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHSC-CSEEEEECSSHH------HHHHHHHH------HHHHHHT-TTCCCEEEEESC--
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC-CCeEEEEECChH------HHHHHHHH------HHhhhhh-cCCCCEEEEeCC--
Confidence 57999998 9999999999998875 346888888642 2220 000 0110100 11112222 123
Q ss_pred CCCCCCCHHHHHHHhccccEEEEcccccC-hhHHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEeC
Q psy6053 181 ADELAIKESDRQLLASEVDIMIHGAATIR-FDEALKKAVLLNTRGTKMMLSLAKEMKHLELFVHIST 246 (614)
Q Consensus 181 ~~~lGLs~~~~~~l~~~vd~ViH~AA~v~-~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vST 246 (614)
.+.++++|+||-+|+..+ ......+....|+.-.+.+.+.+.+. +...++.+=|
T Consensus 64 -----------~~a~~~aDiVViaag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~-~p~a~iivvs 118 (294)
T 1oju_A 64 -----------YSLLKGSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVEN-APESKILVVT 118 (294)
T ss_dssp -----------GGGGTTCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTT-STTCEEEECS
T ss_pred -----------HHHhCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhh-CCCeEEEEeC
Confidence 234679999999998753 23345577889999999999998885 5555444433
No 371
>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*
Probab=93.88 E-value=0.13 Score=53.26 Aligned_cols=118 Identities=17% Similarity=0.069 Sum_probs=71.2
Q ss_pred CCcEEEEecccccccHHHHHHHHhhCCCccE---EEE--EEccCCCcCHHHHHH----HHHhChhhHHhhhhccccccCe
Q psy6053 101 TGKTLFMTGASGFLGKVLLEKILRKSPNVKK---IYI--LMRQKKGKNARQRIE----ELFASPLFNLLKSVHGQKIIDK 171 (614)
Q Consensus 101 ~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~---V~~--LvR~~~~~~~~~Rl~----~~~~~~~f~~l~~~~p~~~~~~ 171 (614)
++.+|.||||+|.+|.+++-.|+..+- +.. |.+ +..++. +++++ ++.+.. .| ...+
T Consensus 31 ~~~KV~ViGAaG~VG~~la~~l~~~~l-~~e~~~l~L~d~d~~~~----~~~~~G~amDL~h~~--------~p--~~~~ 95 (375)
T 7mdh_A 31 KLVNIAVSGAAGMISNHLLFKLASGEV-FGQDQPIALKLLGSERS----FQALEGVAMELEDSL--------YP--LLRE 95 (375)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHTTT-TCTTCCEEEEEECCGGG----HHHHHHHHHHHHTTT--------CT--TEEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHcCCc-CCCCceeEEEecCccch----hhhhHHHHHhHHhhh--------hh--hcCC
Confidence 467899999999999999999987642 222 433 333221 22222 221110 01 1123
Q ss_pred EEEEeCCCCCCCCCCCHHHHHHHhccccEEEEcccccC-hhHHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEeC
Q psy6053 172 VLPISGDAEADELAIKESDRQLLASEVDIMIHGAATIR-FDEALKKAVLLNTRGTKMMLSLAKEMKHLELFVHIST 246 (614)
Q Consensus 172 v~~v~gDl~~~~lGLs~~~~~~l~~~vd~ViH~AA~v~-~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vST 246 (614)
+.+.. + ++ ..++++|+||-+||..+ ..+...++++.|+.-.+.+.+...+..+...++.+-|
T Consensus 96 v~i~~------~------~y-~~~~daDvVVitag~prkpG~tR~DLl~~N~~I~k~i~~~i~~~a~p~~ivlVvs 158 (375)
T 7mdh_A 96 VSIGI------D------PY-EVFEDVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVG 158 (375)
T ss_dssp EEEES------C------HH-HHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred cEEec------C------CH-HHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEec
Confidence 33311 1 23 45689999999998754 3455678899999999999988887423344444433
No 372
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=93.86 E-value=0.36 Score=48.90 Aligned_cols=116 Identities=14% Similarity=0.037 Sum_probs=70.8
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEe-CCCCC
Q psy6053 103 KTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPIS-GDAEA 181 (614)
Q Consensus 103 ~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~-gDl~~ 181 (614)
|+|.|+|| |.+|..++..|+..+. +..|.++++.+... +....++.+...+ ....+.+.. +|.
T Consensus 1 Mkv~ViGa-G~vG~~~a~~l~~~~~-~~el~l~D~~~~k~--~g~a~DL~~~~~~----------~~~~~~v~~~~~~-- 64 (314)
T 3nep_X 1 MKVTVIGA-GNVGATVAECVARQDV-AKEVVMVDIKDGMP--QGKALDMRESSPI----------HGFDTRVTGTNDY-- 64 (314)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTC-SSEEEEECSSTTHH--HHHHHHHHHHHHH----------HTCCCEEEEESSS--
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC-CCEEEEEeCchHHH--HHHHHHHhccccc----------cCCCcEEEECCCH--
Confidence 68999996 9999999999998865 45789988876321 1111122111000 111223321 221
Q ss_pred CCCCCCHHHHHHHhccccEEEEcccccC-hhHHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEeC
Q psy6053 182 DELAIKESDRQLLASEVDIMIHGAATIR-FDEALKKAVLLNTRGTKMMLSLAKEMKHLELFVHIST 246 (614)
Q Consensus 182 ~~lGLs~~~~~~l~~~vd~ViH~AA~v~-~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vST 246 (614)
+.++++|+||-+|+..+ ......+.+..|+.-.+.+.+.+.+. ....++.+-|
T Consensus 65 -----------~a~~~aDvVii~ag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~-~p~a~vivvt 118 (314)
T 3nep_X 65 -----------GPTEDSDVCIITAGLPRSPGMSRDDLLAKNTEIVGGVTEQFVEG-SPDSTIIVVA 118 (314)
T ss_dssp -----------GGGTTCSEEEECCCC-------CHHHHHHHHHHHHHHHHHHHTT-CTTCEEEECC
T ss_pred -----------HHhCCCCEEEECCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHHh-CCCcEEEecC
Confidence 24578999999998753 23344577899999999999998885 4455544433
No 373
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=93.84 E-value=0.036 Score=53.60 Aligned_cols=71 Identities=11% Similarity=0.049 Sum_probs=51.0
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCCC
Q psy6053 102 GKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAEA 181 (614)
Q Consensus 102 ~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~~ 181 (614)
.++|+|.|+ |.+|+.+++.|.+.|+ |.++.|.+. +++++ . .++.++.||.++
T Consensus 9 ~~~viI~G~-G~~G~~la~~L~~~g~----v~vid~~~~------~~~~~----------------~-~~~~~i~gd~~~ 60 (234)
T 2aef_A 9 SRHVVICGW-SESTLECLRELRGSEV----FVLAEDENV------RKKVL----------------R-SGANFVHGDPTR 60 (234)
T ss_dssp -CEEEEESC-CHHHHHHHHHSTTSEE----EEEESCGGG------HHHHH----------------H-TTCEEEESCTTC
T ss_pred CCEEEEECC-ChHHHHHHHHHHhCCe----EEEEECCHH------HHHHH----------------h-cCCeEEEcCCCC
Confidence 468999997 9999999999988753 556666532 22222 1 347889999988
Q ss_pred CCCCCCHHHHHHH-hccccEEEEccc
Q psy6053 182 DELAIKESDRQLL-ASEVDIMIHGAA 206 (614)
Q Consensus 182 ~~lGLs~~~~~~l-~~~vd~ViH~AA 206 (614)
++ .+.++ ++++|.||-+.+
T Consensus 61 ~~------~l~~a~i~~ad~vi~~~~ 80 (234)
T 2aef_A 61 VS------DLEKANVRGARAVIVDLE 80 (234)
T ss_dssp HH------HHHHTTCTTCSEEEECCS
T ss_pred HH------HHHhcCcchhcEEEEcCC
Confidence 65 66666 678999997654
No 374
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=93.83 E-value=0.16 Score=53.75 Aligned_cols=73 Identities=19% Similarity=0.270 Sum_probs=54.9
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCCC
Q psy6053 102 GKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAEA 181 (614)
Q Consensus 102 ~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~~ 181 (614)
+++|+|.|+ |-+|+.+++.|.+.|.+ |.++.+.. ++++++. ..++.++.||.++
T Consensus 4 ~~~viIiG~-Gr~G~~va~~L~~~g~~---vvvId~d~------~~v~~~~----------------~~g~~vi~GDat~ 57 (413)
T 3l9w_A 4 GMRVIIAGF-GRFGQITGRLLLSSGVK---MVVLDHDP------DHIETLR----------------KFGMKVFYGDATR 57 (413)
T ss_dssp CCSEEEECC-SHHHHHHHHHHHHTTCC---EEEEECCH------HHHHHHH----------------HTTCCCEESCTTC
T ss_pred CCeEEEECC-CHHHHHHHHHHHHCCCC---EEEEECCH------HHHHHHH----------------hCCCeEEEcCCCC
Confidence 467999996 99999999999999877 77887763 4444331 1346789999998
Q ss_pred CCCCCCHHHHHHH-hccccEEEEccc
Q psy6053 182 DELAIKESDRQLL-ASEVDIMIHGAA 206 (614)
Q Consensus 182 ~~lGLs~~~~~~l-~~~vd~ViH~AA 206 (614)
++ .+..+ ++++|+||-+..
T Consensus 58 ~~------~L~~agi~~A~~viv~~~ 77 (413)
T 3l9w_A 58 MD------LLESAGAAKAEVLINAID 77 (413)
T ss_dssp HH------HHHHTTTTTCSEEEECCS
T ss_pred HH------HHHhcCCCccCEEEECCC
Confidence 76 56665 678999986654
No 375
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=93.68 E-value=0.11 Score=55.31 Aligned_cols=101 Identities=16% Similarity=0.158 Sum_probs=66.3
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCc--cEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 102 GKTLFMTGASGFLGKVLLEKILRKSPNV--KKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 102 ~~~VLITGaTGFlG~~Ll~~Ll~~g~~v--~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
.++|+|.| .|-+|+.++..|.++ +++ .+|.+....+.+.+..++ .++.+...++
T Consensus 13 ~~rVlIIG-aGgVG~~va~lla~~-~dv~~~~I~vaD~~~~~~~~~~~----------------------~g~~~~~~~V 68 (480)
T 2ph5_A 13 KNRFVILG-FGCVGQALMPLIFEK-FDIKPSQVTIIAAEGTKVDVAQQ----------------------YGVSFKLQQI 68 (480)
T ss_dssp CSCEEEEC-CSHHHHHHHHHHHHH-BCCCGGGEEEEESSCCSCCHHHH----------------------HTCEEEECCC
T ss_pred CCCEEEEC-cCHHHHHHHHHHHhC-CCCceeEEEEeccchhhhhHHhh----------------------cCCceeEEec
Confidence 35799999 899999999999998 444 467777766555433211 1345666676
Q ss_pred CCCCCCCCHHHHHHHhccccEEEEcccccChhHHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEeCce
Q psy6053 180 EADELAIKESDRQLLASEVDIMIHGAATIRFDEALKKAVLLNTRGTKMMLSLAKEMKHLELFVHISTAY 248 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vST~~ 248 (614)
+..+. ++.+..++++.|+|+|++-.. .+ ..++++|.+. + +.|++|+-
T Consensus 69 dadnv---~~~l~aLl~~~DvVIN~s~~~-~~--------------l~Im~aclea-G---v~YlDTa~ 115 (480)
T 2ph5_A 69 TPQNY---LEVIGSTLEENDFLIDVSIGI-SS--------------LALIILCNQK-G---ALYINAAT 115 (480)
T ss_dssp CTTTH---HHHTGGGCCTTCEEEECCSSS-CH--------------HHHHHHHHHH-T---CEEEESSC
T ss_pred cchhH---HHHHHHHhcCCCEEEECCccc-cC--------------HHHHHHHHHc-C---CCEEECCC
Confidence 66531 122445666669999965332 12 4588999995 3 57888884
No 376
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=93.57 E-value=0.063 Score=54.88 Aligned_cols=38 Identities=21% Similarity=0.256 Sum_probs=31.8
Q ss_pred ccCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccC
Q psy6053 99 TFTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQK 139 (614)
Q Consensus 99 ~~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~ 139 (614)
.-.|++||||||+|-+|...++.+...|. +|++..|+.
T Consensus 147 ~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga---~Vi~~~~~~ 184 (336)
T 4b7c_A 147 PKNGETVVISGAAGAVGSVAGQIARLKGC---RVVGIAGGA 184 (336)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTC---EEEEEESSH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEeCCH
Confidence 34689999999999999999988888875 488888763
No 377
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=93.55 E-value=0.062 Score=53.80 Aligned_cols=37 Identities=14% Similarity=0.187 Sum_probs=31.7
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQK 139 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~ 139 (614)
.++++++|+|| |-+|+.++..|.+.|. .+|++..|..
T Consensus 125 l~~k~vlVlGa-GG~g~aia~~L~~~G~--~~v~i~~R~~ 161 (283)
T 3jyo_A 125 AKLDSVVQVGA-GGVGNAVAYALVTHGV--QKLQVADLDT 161 (283)
T ss_dssp CCCSEEEEECC-SHHHHHHHHHHHHTTC--SEEEEECSSH
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCC--CEEEEEECCH
Confidence 46899999997 8899999999999875 4688888874
No 378
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=93.43 E-value=0.12 Score=53.18 Aligned_cols=37 Identities=11% Similarity=0.268 Sum_probs=31.6
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQK 139 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~ 139 (614)
-.|++|+|+||+|-+|...++.+...|.+ |++..|+.
T Consensus 166 ~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~---Vi~~~~~~ 202 (353)
T 4dup_A 166 TEGESVLIHGGTSGIGTTAIQLARAFGAE---VYATAGST 202 (353)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCE---EEEEESSH
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHHHcCCE---EEEEeCCH
Confidence 45889999999999999999988888754 88888864
No 379
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=93.35 E-value=0.19 Score=51.49 Aligned_cols=40 Identities=10% Similarity=0.160 Sum_probs=33.1
Q ss_pred ccCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCC
Q psy6053 99 TFTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKG 141 (614)
Q Consensus 99 ~~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~ 141 (614)
.-.|++|+|+||+|-+|...++.+...|. +|++.+|+...
T Consensus 142 ~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga---~Vi~~~~~~~~ 181 (340)
T 3gms_A 142 LQRNDVLLVNACGSAIGHLFAQLSQILNF---RLIAVTRNNKH 181 (340)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHHTC---EEEEEESSSTT
T ss_pred cCCCCEEEEeCCccHHHHHHHHHHHHcCC---EEEEEeCCHHH
Confidence 34688999999999999999988887875 48899987654
No 380
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=93.25 E-value=0.044 Score=56.57 Aligned_cols=35 Identities=31% Similarity=0.499 Sum_probs=28.1
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEEcc
Q psy6053 102 GKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQ 138 (614)
Q Consensus 102 ~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~ 138 (614)
.++|.|.||||.+|+.+++.|++. +++ +|..+.+.
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~-p~~-elv~v~s~ 38 (345)
T 2ozp_A 4 KKTLSIVGASGYAGGEFLRLALSH-PYL-EVKQVTSR 38 (345)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTC-TTE-EEEEEBCS
T ss_pred CCEEEEECCCCHHHHHHHHHHHcC-CCc-EEEEEECc
Confidence 468999999999999999999876 554 46666654
No 381
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=93.22 E-value=0.39 Score=48.53 Aligned_cols=117 Identities=15% Similarity=0.166 Sum_probs=69.3
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCCCC
Q psy6053 103 KTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAEAD 182 (614)
Q Consensus 103 ~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~~~ 182 (614)
++|.|+|| |.+|..++..|+..|. + .|.++++.+.. .+....++.+...+ . . ...++... .|
T Consensus 3 ~kI~VIGa-G~vG~~~a~~la~~g~-~-~v~L~Di~~~~--~~g~~~dl~~~~~~------~-~-~~~~i~~t-~d---- 64 (309)
T 1ur5_A 3 KKISIIGA-GFVGSTTAHWLAAKEL-G-DIVLLDIVEGV--PQGKALDLYEASPI------E-G-FDVRVTGT-NN---- 64 (309)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTC-S-EEEEECSSSSH--HHHHHHHHHTTHHH------H-T-CCCCEEEE-SC----
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCC-C-eEEEEeCCccH--HHHHHHhHHHhHhh------c-C-CCeEEEEC-CC----
Confidence 58999998 9999999999998875 2 38888776422 11111122111000 0 0 11233321 33
Q ss_pred CCCCCHHHHHHHhccccEEEEcccccCh-hHHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEeCc
Q psy6053 183 ELAIKESDRQLLASEVDIMIHGAATIRF-DEALKKAVLLNTRGTKMMLSLAKEMKHLELFVHISTA 247 (614)
Q Consensus 183 ~lGLs~~~~~~l~~~vd~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vST~ 247 (614)
+ +.++++|+||.+|+...- .....+....|+...+.+.+.+.+. ....++.+.|-
T Consensus 65 --------~-~a~~~aD~Vi~a~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~vi~~tN 120 (309)
T 1ur5_A 65 --------Y-ADTANSDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPL-SPNAVIIMVNN 120 (309)
T ss_dssp --------G-GGGTTCSEEEECCCC--------CHHHHHHHHHHHHHHHHHGGG-CTTCEEEECCS
T ss_pred --------H-HHHCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhh-CCCeEEEEcCC
Confidence 2 236789999999987542 2222345678888888999888885 46667666554
No 382
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=93.20 E-value=0.35 Score=49.41 Aligned_cols=118 Identities=12% Similarity=0.081 Sum_probs=71.3
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCH-HHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCC
Q psy6053 102 GKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNA-RQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAE 180 (614)
Q Consensus 102 ~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~-~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~ 180 (614)
.++|.|.|| |.+|..++..|...|+ + .|.+.++.+..... ...+.+... .+ + ...++... .
T Consensus 9 ~~kI~VIGa-G~vG~~lA~~la~~g~-~-~V~L~D~~~~~~~~~~~~l~~~~~-----~~----~--~~~~i~~t-~--- 70 (331)
T 1pzg_A 9 RKKVAMIGS-GMIGGTMGYLCALREL-A-DVVLYDVVKGMPEGKALDLSHVTS-----VV----D--TNVSVRAE-Y--- 70 (331)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTC-C-EEEEECSSSSHHHHHHHHHHHHHH-----HT----T--CCCCEEEE-C---
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCC-C-eEEEEECChhHHHHHHHHHHhhhh-----cc----C--CCCEEEEe-C---
Confidence 478999998 9999999999999886 1 38888886532111 011111110 00 0 11233321 1
Q ss_pred CCCCCCCHHHHHHHhccccEEEEcccccC-hhH-----HHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEeCc
Q psy6053 181 ADELAIKESDRQLLASEVDIMIHGAATIR-FDE-----ALKKAVLLNTRGTKMMLSLAKEMKHLELFVHISTA 247 (614)
Q Consensus 181 ~~~lGLs~~~~~~l~~~vd~ViH~AA~v~-~~~-----~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vST~ 247 (614)
++++.++++|+||-+++... ... ...+....|+.-.+.+.+...+. ....++.+.|-
T Consensus 71 ---------d~~ea~~~aDiVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~vi~~tN 133 (331)
T 1pzg_A 71 ---------SYEAALTGADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKY-CPKTFIIVVTN 133 (331)
T ss_dssp ---------SHHHHHTTCSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHH-CTTCEEEECCS
T ss_pred ---------CHHHHhCCCCEEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCcEEEEEcC
Confidence 45656789999999997543 111 22344667888888888888775 34555555544
No 383
>3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli}
Probab=93.17 E-value=0.044 Score=61.12 Aligned_cols=85 Identities=15% Similarity=-0.003 Sum_probs=51.2
Q ss_pred cCCCCCCCCCceeeeeec-------ccccccchHHHHHHHhhccccccccCCCchhhhh---hhhHHHHHHHHHHhhcCC
Q psy6053 3 VPQAAPCTVGRYVTYHLS-------YLCDFAIMFADLAIMFADLPIMFADFSLPLEFIR---CEVIVSELVMAANKVNNM 72 (614)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~s~~~~~l~~~l~~~~~~ 72 (614)
+|..+||||||+++-..- +....+. -..+.-.-..+.....++...-+|+. +|+++++|+..+++ .+.
T Consensus 515 lP~t~~GKidR~~L~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~l~~~~~~~~~d~Ff~lGgdSl~a~~l~~~l~~-~~~ 592 (617)
T 3rg2_A 515 LPLTAVGKVDKKQLRQWLASRASAGRASIPAS-KAALREVILPLLDESDEPFDDDNLIDYGLDSVRMMALAARWRK-VHG 592 (617)
T ss_dssp CCBCTTSSBCHHHHHHHHHHHHHHSSSCCCCS-HHHHHHHHGGGSCTTCCCCTTSCGGGGTCCHHHHHHHHHHHHT-TST
T ss_pred cCCCCCCCCcHHHHHHHHhccccccccccccc-HHHHHHHHHHHhccCCCCCCCCChhhcCccHHHHHHHHHHHHH-hcC
Confidence 799999999999873211 0110111 01111111111111123333333433 99999999999998 588
Q ss_pred CCccccccCCCCchhhh
Q psy6053 73 NVPYETFYKPPVLSEEY 89 (614)
Q Consensus 73 ~~~~~~~~~~~tl~~~~ 89 (614)
+++..++|++||+++-.
T Consensus 593 ~~~~~~~~~~pti~~la 609 (617)
T 3rg2_A 593 DIDFVMLAKNPTIDAWW 609 (617)
T ss_dssp TCCHHHHHHSCCHHHHH
T ss_pred CCCHHHHhcCCCHHHHH
Confidence 99999999999998644
No 384
>4dg8_A PA1221; ANL superfamily, adenylation domain, peptidyl carrier protei ribosomal peptide synthetase, NRPS, valine adenylation, LIG; HET: AMP; 2.15A {Pseudomonas aeruginosa} PDB: 4dg9_A*
Probab=93.12 E-value=0.016 Score=64.89 Aligned_cols=85 Identities=11% Similarity=0.025 Sum_probs=10.5
Q ss_pred cCCCCCCCCCceeeeeecccccccchHHHHHHHhhcccccc------ccCCCchhhhh---hhhHHHHHHHHHHh-hcCC
Q psy6053 3 VPQAAPCTVGRYVTYHLSYLCDFAIMFADLAIMFADLPIMF------ADFSLPLEFIR---CEVIVSELVMAANK-VNNM 72 (614)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~---~s~~~~~l~~~l~~-~~~~ 72 (614)
+|..+||||||+++... |............-.-..+..++ ..+...-+|+. +|+++++|+..+++ .+|+
T Consensus 494 lP~t~~GKidR~~L~~~-~~~~~~~~~~~~~~~e~~l~~iw~~vL~~~~~~~~d~Ff~lGGdSl~a~~l~~~l~~~~~~~ 572 (620)
T 4dg8_A 494 LPLTAHGKLDRAALLRR-LEEPLERCASALDPDQRGCAQLWSELLGCEVGAADQDFFLCGGNSLLALQLVALCQSAGAGA 572 (620)
T ss_dssp CCCC----CCHHHHHHH-TCSCC---------------------------------------------------------
T ss_pred CCCCcccCHhHHHHhhc-cccccccccCCCCHHHHHHHHHHHHHhCCCCCCCCCChhhccCcHHHHHHHHHHHHhhCCCC
Confidence 79999999999987321 11000000000000000111122 12233333433 99999999999999 8999
Q ss_pred CCccccccCCCCchhh
Q psy6053 73 NVPYETFYKPPVLSEE 88 (614)
Q Consensus 73 ~~~~~~~~~~~tl~~~ 88 (614)
++++.++|++||+++-
T Consensus 573 ~l~~~~~f~~pti~~l 588 (620)
T 4dg8_A 573 NLGLADLQANSRLDQF 588 (620)
T ss_dssp ----------------
T ss_pred CcCHHHHhcCCCHHHH
Confidence 9999999999999763
No 385
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=92.99 E-value=0.071 Score=55.30 Aligned_cols=37 Identities=16% Similarity=0.373 Sum_probs=29.1
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEcc
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQ 138 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~ 138 (614)
++.++|.|.||||.+|+.+++.|++. +++ +|.++.+.
T Consensus 14 M~~~kV~IiGAtG~iG~~llr~L~~~-p~~-elvai~~~ 50 (359)
T 1xyg_A 14 EKDIRIGLLGASGYTGAEIVRLLANH-PHF-QVTLMTAD 50 (359)
T ss_dssp -CCEEEEEECCSSHHHHHHHHHHHTC-SSE-EEEEEBCS
T ss_pred ccCcEEEEECcCCHHHHHHHHHHHcC-CCc-EEEEEeCc
Confidence 34578999999999999999999876 654 46666654
No 386
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=92.95 E-value=0.51 Score=47.29 Aligned_cols=116 Identities=18% Similarity=0.046 Sum_probs=74.2
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEE-eCCCCC
Q psy6053 103 KTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPI-SGDAEA 181 (614)
Q Consensus 103 ~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v-~gDl~~ 181 (614)
|+|-|+|| |.+|+.++..|+.++ -+.++.+++..+.. ++.--.++.+ ..+. .......+ .+|..
T Consensus 1 MKV~IiGa-G~VG~~~a~~l~~~~-~~~el~L~Di~~~~--~~G~a~DL~h---------~~~~-~~~~~~i~~~~d~~- 65 (294)
T 2x0j_A 1 MKLGFVGA-GRVGSTSAFTCLLNL-DVDEIALVDIAEDL--AVGEAMDLAH---------AAAG-IDKYPKIVGGADYS- 65 (294)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHS-CCSEEEEECSSHHH--HHHHHHHHHH---------HHGG-GTCCCEEEEESCGG-
T ss_pred CEEEEECc-CHHHHHHHHHHHhCC-CCCEEEEEeCCCCc--chhhhhhhhc---------cccc-CCCCCeEecCCCHH-
Confidence 68999995 999999999998884 45678888875321 1111111111 0010 11122222 23322
Q ss_pred CCCCCCHHHHHHHhccccEEEEcccccC-hhHHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEeC
Q psy6053 182 DELAIKESDRQLLASEVDIMIHGAATIR-FDEALKKAVLLNTRGTKMMLSLAKEMKHLELFVHIST 246 (614)
Q Consensus 182 ~~lGLs~~~~~~l~~~vd~ViH~AA~v~-~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vST 246 (614)
.++++|+|+-.||..+ ...+..++++.|..-.+.+.+.+.+. ..+.++.+=|
T Consensus 66 ------------~~~~aDvVvitAG~prkpGmtR~dLl~~Na~I~~~i~~~i~~~-~p~aivlvvs 118 (294)
T 2x0j_A 66 ------------LLKGSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVEN-APESKILVVT 118 (294)
T ss_dssp ------------GGTTCSEEEECCCCCCCSSSCHHHHHHHHHHHHHHHHHHHHTT-STTCEEEECS
T ss_pred ------------HhCCCCEEEEecCCCCCCCCchHHHHHHHHHHHHHHHHHHHhc-CCceEEEEec
Confidence 3578999999999764 34566788999999999999999885 5566555444
No 387
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=92.93 E-value=0.12 Score=51.25 Aligned_cols=36 Identities=22% Similarity=0.241 Sum_probs=30.6
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQK 139 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~ 139 (614)
.++++|+|+|+ |-+|+.++..|++.|. +|++..|..
T Consensus 117 l~~k~vlViGa-Gg~g~a~a~~L~~~G~---~V~v~~R~~ 152 (271)
T 1nyt_A 117 RPGLRILLIGA-GGASRGVLLPLLSLDC---AVTITNRTV 152 (271)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTC---EEEEECSSH
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHcCC---EEEEEECCH
Confidence 46899999998 6799999999999984 488888863
No 388
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=92.90 E-value=0.21 Score=51.72 Aligned_cols=36 Identities=11% Similarity=0.312 Sum_probs=30.8
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQK 139 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~ 139 (614)
++|++|+|+|| |-+|...++.+...|. +|++..|+.
T Consensus 179 ~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga---~Vi~~~~~~ 214 (366)
T 2cdc_A 179 LNCRKVLVVGT-GPIGVLFTLLFRTYGL---EVWMANRRE 214 (366)
T ss_dssp STTCEEEEESC-HHHHHHHHHHHHHHTC---EEEEEESSC
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCC---EEEEEeCCc
Confidence 45899999999 9999999998888875 488998875
No 389
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=92.90 E-value=0.72 Score=46.83 Aligned_cols=116 Identities=16% Similarity=0.101 Sum_probs=72.0
Q ss_pred CCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCC
Q psy6053 101 TGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAE 180 (614)
Q Consensus 101 ~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~ 180 (614)
+.++|.|+| +|.+|..++..|+..+.. .|+++++.+... +....++.+...+. . ...++.. ..|
T Consensus 4 ~~~kI~iiG-aG~vG~~~a~~l~~~~~~--~v~l~Di~~~~~--~g~a~dL~~~~~~~-------~-~~~~v~~-t~d-- 67 (321)
T 3p7m_A 4 ARKKITLVG-AGNIGGTLAHLALIKQLG--DVVLFDIAQGMP--NGKALDLLQTCPIE-------G-VDFKVRG-TND-- 67 (321)
T ss_dssp CCCEEEEEC-CSHHHHHHHHHHHHTTCC--EEEEECSSSSHH--HHHHHHHHTTHHHH-------T-CCCCEEE-ESC--
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhCCCc--eEEEEeCChHHH--HHHHHHHHhhhhhc-------C-CCcEEEE-cCC--
Confidence 457899999 499999999999888752 688888875321 11111221111000 0 1122221 122
Q ss_pred CCCCCCCHHHHHHHhccccEEEEcccccC-hhHHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEE
Q psy6053 181 ADELAIKESDRQLLASEVDIMIHGAATIR-FDEALKKAVLLNTRGTKMMLSLAKEMKHLELFVHI 244 (614)
Q Consensus 181 ~~~lGLs~~~~~~l~~~vd~ViH~AA~v~-~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~v 244 (614)
+ +.++++|+||.+|+..+ ......+.+..|+.-.+.+.+.+.+. ....++.+
T Consensus 68 ----------~-~a~~~aDvVIi~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~-~p~a~viv 120 (321)
T 3p7m_A 68 ----------Y-KDLENSDVVIVTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHN-CPNAFVIC 120 (321)
T ss_dssp ----------G-GGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEE
T ss_pred ----------H-HHHCCCCEEEEcCCcCCCCCCCHHHHHHHhHHHHHHHHHHHHHH-CCCcEEEE
Confidence 1 24678999999998753 23345567888999999999998885 44444433
No 390
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=92.88 E-value=0.15 Score=51.88 Aligned_cols=38 Identities=13% Similarity=0.150 Sum_probs=31.9
Q ss_pred ccCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccC
Q psy6053 99 TFTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQK 139 (614)
Q Consensus 99 ~~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~ 139 (614)
.-.|++|||+||+|-+|...++.+...|. +|++.+|++
T Consensus 138 ~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga---~Vi~~~~~~ 175 (325)
T 3jyn_A 138 VKPGEIILFHAAAGGVGSLACQWAKALGA---KLIGTVSSP 175 (325)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHHTC---EEEEEESSH
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCC---EEEEEeCCH
Confidence 34588999999999999999998888875 488888753
No 391
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=92.83 E-value=0.6 Score=47.32 Aligned_cols=118 Identities=12% Similarity=0.130 Sum_probs=72.1
Q ss_pred CCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCC
Q psy6053 101 TGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAE 180 (614)
Q Consensus 101 ~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~ 180 (614)
+.++|.|+|+ |.+|..++..|+..|. ..|.+.++.......+..-.++.+. .. ... ...++.. ..|.
T Consensus 7 ~~~kv~ViGa-G~vG~~ia~~l~~~g~--~~v~l~D~~~~~~~~~g~a~dl~~~-----~~--~~~-~~~~i~~-t~d~- 73 (315)
T 3tl2_A 7 KRKKVSVIGA-GFTGATTAFLLAQKEL--ADVVLVDIPQLENPTKGKALDMLEA-----SP--VQG-FDANIIG-TSDY- 73 (315)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTC--CEEEEECCGGGHHHHHHHHHHHHHH-----HH--HHT-CCCCEEE-ESCG-
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCC--CeEEEEeccchHHHHHHhhhhHHHh-----hh--hcc-CCCEEEE-cCCH-
Confidence 3578999996 9999999999999876 3588888863110011111111111 00 000 1123332 1221
Q ss_pred CCCCCCCHHHHHHHhccccEEEEcccccC-hhHHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEE
Q psy6053 181 ADELAIKESDRQLLASEVDIMIHGAATIR-FDEALKKAVLLNTRGTKMMLSLAKEMKHLELFVHI 244 (614)
Q Consensus 181 ~~~lGLs~~~~~~l~~~vd~ViH~AA~v~-~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~v 244 (614)
..++++|+||-+|+..+ ......+.+..|+.-.+.+.+.+.+. ....++.+
T Consensus 74 ------------~a~~~aDvVIiaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~-~p~a~vlv 125 (315)
T 3tl2_A 74 ------------ADTADSDVVVITAGIARKPGMSRDDLVATNSKIMKSITRDIAKH-SPNAIIVV 125 (315)
T ss_dssp ------------GGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEE
T ss_pred ------------HHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEE
Confidence 23578999999998754 23445678899999999999988885 44444433
No 392
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=92.67 E-value=0.87 Score=46.32 Aligned_cols=114 Identities=13% Similarity=0.068 Sum_probs=70.6
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCCC
Q psy6053 102 GKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAEA 181 (614)
Q Consensus 102 ~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~~ 181 (614)
.++|.|+|| |.+|..++-.|+..+. +..|.++++.. +|++.... .+.+..+ ....+.+..+|
T Consensus 9 ~~KI~IiGa-G~vG~~la~~l~~~~~-~~el~L~Di~~------~~~~g~~~-----dl~~~~~--~~~~~~i~~~~--- 70 (326)
T 2zqz_A 9 HQKVILVGD-GAVGSSYAYAMVLQGI-AQEIGIVDIFK------DKTKGDAI-----DLSNALP--FTSPKKIYSAE--- 70 (326)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECSCH------HHHHHHHH-----HHHTTGG--GSCCCEEEECC---
T ss_pred CCEEEEECC-CHHHHHHHHHHHcCCC-CCEEEEEeCCc------hHhHHHHH-----HHHHHHH--hcCCeEEEECC---
Confidence 468999998 9999999999988854 56788888842 33322100 0111011 11334443322
Q ss_pred CCCCCCHHHHHHHhccccEEEEcccccCh-hHHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEE
Q psy6053 182 DELAIKESDRQLLASEVDIMIHGAATIRF-DEALKKAVLLNTRGTKMMLSLAKEMKHLELFVHI 244 (614)
Q Consensus 182 ~~lGLs~~~~~~l~~~vd~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~v 244 (614)
.+.++++|+||.+|+...- .....+....|+.-.+.+.+.+.+. ....++.+
T Consensus 71 ----------~~a~~~aDvVii~ag~~~k~g~~R~dl~~~n~~i~~~i~~~i~~~-~p~a~iiv 123 (326)
T 2zqz_A 71 ----------YSDAKDADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDS-GFNGIFLV 123 (326)
T ss_dssp ----------GGGGGGCSEEEECCCCC-----CHHHHHHHHHHHHHHHHHHHHHH-TCCSEEEE
T ss_pred ----------HHHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEE
Confidence 1236799999999986532 2334466788999999999888885 44544444
No 393
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=92.60 E-value=1.4 Score=44.63 Aligned_cols=118 Identities=15% Similarity=0.187 Sum_probs=74.3
Q ss_pred CCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHH-HHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 101 TGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEE-LFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 101 ~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~-~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
+.++|.|+|| |.+|..++..|+..+. +..|.++++.+ +|++. ..+ +.+..+. ....+.+..+|
T Consensus 5 ~~~KI~IIGa-G~vG~~la~~l~~~~~-~~ei~L~Di~~------~~~~g~~~d------l~~~~~~-~~~~~~v~~~~- 68 (317)
T 3d0o_A 5 KGNKVVLIGN-GAVGSSYAFSLVNQSI-VDELVIIDLDT------EKVRGDVMD------LKHATPY-SPTTVRVKAGE- 68 (317)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHCS-CSEEEEECSCH------HHHHHHHHH------HHHHGGG-SSSCCEEEECC-
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCC-CCEEEEEeCCh------hHhhhhhhh------HHhhhhh-cCCCeEEEeCC-
Confidence 3578999998 9999999999998864 35687777652 23321 110 0000111 11233333322
Q ss_pred CCCCCCCCHHHHHHHhccccEEEEcccccC-hhHHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEeCc
Q psy6053 180 EADELAIKESDRQLLASEVDIMIHGAATIR-FDEALKKAVLLNTRGTKMMLSLAKEMKHLELFVHISTA 247 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~~vd~ViH~AA~v~-~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vST~ 247 (614)
.+.++++|+||-+|+... ......+....|+.-.+.+.+.+.+. ....++.+.|-
T Consensus 69 ------------~~a~~~aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~viv~tN 124 (317)
T 3d0o_A 69 ------------YSDCHDADLVVICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMAS-KFDGIFLVATN 124 (317)
T ss_dssp ------------GGGGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHT-TCCSEEEECSS
T ss_pred ------------HHHhCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHh-CCCcEEEEecC
Confidence 123679999999998753 23334466788999899999988885 55666666553
No 394
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=92.50 E-value=0.26 Score=50.23 Aligned_cols=36 Identities=17% Similarity=0.225 Sum_probs=30.7
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEcc
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQ 138 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~ 138 (614)
-.|++|||+||+|-+|...++.+...|. +|++..|+
T Consensus 147 ~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga---~Vi~~~~~ 182 (334)
T 3qwb_A 147 KKGDYVLLFAAAGGVGLILNQLLKMKGA---HTIAVAST 182 (334)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHTTC---EEEEEESS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEeCC
Confidence 4588999999999999999988887775 48888885
No 395
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=92.49 E-value=0.096 Score=53.70 Aligned_cols=36 Identities=28% Similarity=0.434 Sum_probs=28.1
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccC
Q psy6053 102 GKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQK 139 (614)
Q Consensus 102 ~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~ 139 (614)
+++|.|.||||.+|..|++.|.+. +++ ++..+.+.+
T Consensus 4 M~kv~IvGatG~vG~~l~~~L~~~-p~~-el~~l~s~~ 39 (337)
T 3dr3_A 4 MLNTLIVGASGYAGAELVTYVNRH-PHM-NITALTVSA 39 (337)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHC-TTE-EEEEEEEET
T ss_pred ceEEEEECCCChHHHHHHHHHHhC-CCC-cEEEEEecC
Confidence 368999999999999999988875 665 466665443
No 396
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=92.43 E-value=0.72 Score=46.79 Aligned_cols=114 Identities=12% Similarity=0.091 Sum_probs=68.9
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCCC
Q psy6053 102 GKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAEA 181 (614)
Q Consensus 102 ~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~~ 181 (614)
.++|.|+|| |.+|..++..|+..+. +.+|.++++.. +|++.... .+.+..+ ....+.+..+|
T Consensus 5 ~~KI~IiGa-G~vG~~~a~~l~~~~~-~~el~L~Di~~------~~~~g~~~-----dl~~~~~--~~~~~~v~~~~--- 66 (318)
T 1ez4_A 5 HQKVVLVGD-GAVGSSYAFAMAQQGI-AEEFVIVDVVK------DRTKGDAL-----DLEDAQA--FTAPKKIYSGE--- 66 (318)
T ss_dssp BCEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECSSH------HHHHHHHH-----HHHGGGG--GSCCCEEEECC---
T ss_pred CCEEEEECC-CHHHHHHHHHHHcCCC-CCEEEEEeCCc------hHHHHHHH-----HHHHHHH--hcCCeEEEECC---
Confidence 368999998 9999999999988854 56788888842 33321100 0111111 11334443322
Q ss_pred CCCCCCHHHHHHHhccccEEEEcccccCh-hHHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEE
Q psy6053 182 DELAIKESDRQLLASEVDIMIHGAATIRF-DEALKKAVLLNTRGTKMMLSLAKEMKHLELFVHI 244 (614)
Q Consensus 182 ~~lGLs~~~~~~l~~~vd~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~v 244 (614)
.+.++++|+||.+|+...- .....+....|+.-.+.+.+.+.+. ....++.+
T Consensus 67 ----------~~a~~~aDvVii~ag~~~~~g~~R~dl~~~n~~i~~~i~~~i~~~-~p~a~iiv 119 (318)
T 1ez4_A 67 ----------YSDCKDADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDS-GFDGIFLV 119 (318)
T ss_dssp ----------GGGGTTCSEEEECCCC----------CHHHHHHHHHHHHHHHHHT-TCCSEEEE
T ss_pred ----------HHHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEE
Confidence 1236799999999986532 2333456788999999999988885 45555544
No 397
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=92.22 E-value=0.22 Score=51.01 Aligned_cols=35 Identities=23% Similarity=0.487 Sum_probs=27.9
Q ss_pred CcEEEEecccccccHHHHHHHHhhC-CCccEEEEEEc
Q psy6053 102 GKTLFMTGASGFLGKVLLEKILRKS-PNVKKIYILMR 137 (614)
Q Consensus 102 ~~~VLITGaTGFlG~~Ll~~Ll~~g-~~v~~V~~LvR 137 (614)
.++|.|.||||.+|+.+++.|++++ +++ +|.++..
T Consensus 3 ~~kV~I~GAtG~iG~~llr~L~~~~~p~~-elv~i~s 38 (336)
T 2r00_A 3 QFNVAIFGATGAVGETMLEVLQEREFPVD-ELFLLAS 38 (336)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTCCEE-EEEEEEC
T ss_pred ccEEEEECCCCHHHHHHHHHHhcCCCCCE-EEEEEEC
Confidence 4789999999999999999998875 443 4666653
No 398
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=92.21 E-value=0.17 Score=52.34 Aligned_cols=36 Identities=17% Similarity=0.188 Sum_probs=30.8
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEcc
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQ 138 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~ 138 (614)
-.|++|||+||+|.+|...++.+...|. +|++.+|+
T Consensus 162 ~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga---~Vi~~~~~ 197 (362)
T 2c0c_A 162 SEGKKVLVTAAAGGTGQFAMQLSKKAKC---HVIGTCSS 197 (362)
T ss_dssp CTTCEEEETTTTBTTHHHHHHHHHHTTC---EEEEEESS
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHhCCC---EEEEEECC
Confidence 4578999999999999999988887775 48888886
No 399
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=92.12 E-value=0.89 Score=46.22 Aligned_cols=117 Identities=15% Similarity=0.107 Sum_probs=70.5
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
++.++|.|+|| |.+|..++..|+..|.. +|.++++.+... +.-..++.+...+. . ...++.. ..|
T Consensus 5 m~~~kI~viGa-G~vG~~~a~~l~~~~~~--~v~L~Di~~~~~--~g~~~dl~~~~~~~-------~-~~~~v~~-t~d- 69 (324)
T 3gvi_A 5 MARNKIALIGS-GMIGGTLAHLAGLKELG--DVVLFDIAEGTP--QGKGLDIAESSPVD-------G-FDAKFTG-AND- 69 (324)
T ss_dssp -CCCEEEEECC-SHHHHHHHHHHHHTTCC--EEEEECSSSSHH--HHHHHHHHHHHHHH-------T-CCCCEEE-ESS-
T ss_pred CcCCEEEEECC-CHHHHHHHHHHHhCCCC--eEEEEeCCchhH--HHHHHHHhchhhhc-------C-CCCEEEE-eCC-
Confidence 45679999998 99999999999988762 588888865321 11111111110000 0 1122322 233
Q ss_pred CCCCCCCCHHHHHHHhccccEEEEcccccC-hhHHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEE
Q psy6053 180 EADELAIKESDRQLLASEVDIMIHGAATIR-FDEALKKAVLLNTRGTKMMLSLAKEMKHLELFVHI 244 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~~vd~ViH~AA~v~-~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~v 244 (614)
+ +.++++|+||-+|+..+ ......+.+..|+.-.+.+.+.+.+. ....++.+
T Consensus 70 -----------~-~a~~~aDiVIiaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~-~p~a~iiv 122 (324)
T 3gvi_A 70 -----------Y-AAIEGADVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKY-APEAFVIC 122 (324)
T ss_dssp -----------G-GGGTTCSEEEECCSCCCC-----CHHHHHHHHHHHHHHHHHHHH-CTTCEEEE
T ss_pred -----------H-HHHCCCCEEEEccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHH-CCCeEEEe
Confidence 2 34679999999998653 23344567788999999999988885 44444433
No 400
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=92.08 E-value=0.082 Score=54.72 Aligned_cols=34 Identities=18% Similarity=0.316 Sum_probs=28.2
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEEcc
Q psy6053 103 KTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQ 138 (614)
Q Consensus 103 ~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~ 138 (614)
++|.|.||||.+|+.+++.|++. +++ +|.++.|+
T Consensus 9 ~kV~IiGAtG~iG~~llr~L~~~-p~~-ev~~i~~s 42 (354)
T 1ys4_A 9 IKVGVLGATGSVGQRFVQLLADH-PMF-ELTALAAS 42 (354)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTC-SSE-EEEEEEEC
T ss_pred ceEEEECcCCHHHHHHHHHHhcC-CCC-EEEEEEcc
Confidence 58999999999999999988876 554 57777763
No 401
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=92.07 E-value=0.16 Score=52.23 Aligned_cols=33 Identities=27% Similarity=0.352 Sum_probs=27.2
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEE
Q psy6053 102 GKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILM 136 (614)
Q Consensus 102 ~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~Lv 136 (614)
..+|.|.||||++|..|++.|.+. |.+ +|..+.
T Consensus 13 ~~~V~IvGAtG~vG~ellrlL~~h-P~~-el~~l~ 45 (351)
T 1vkn_A 13 MIRAGIIGATGYTGLELVRLLKNH-PEA-KITYLS 45 (351)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHC-TTE-EEEEEE
T ss_pred eeEEEEECCCCHHHHHHHHHHHcC-CCc-EEEEEe
Confidence 358999999999999999999876 764 566654
No 402
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=92.07 E-value=0.1 Score=63.55 Aligned_cols=81 Identities=9% Similarity=0.094 Sum_probs=54.0
Q ss_pred cCCCCCCCCCceeeeeecccc------ccc----chHHHHHHHhhccccccccCCCchhhhh---hhhHHHHHHHHHHhh
Q psy6053 3 VPQAAPCTVGRYVTYHLSYLC------DFA----IMFADLAIMFADLPIMFADFSLPLEFIR---CEVIVSELVMAANKV 69 (614)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~------~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~s~~~~~l~~~l~~~ 69 (614)
+|..+||||||+++-...-.. .+. ..+.++=.+.+.+ ..+...-+|+. +|+++++|+..+++.
T Consensus 941 lP~t~~GKidR~~L~~~~~~~~~~~~~~p~~~~e~~l~~~~~~vL~~----~~i~~~~~ff~lGg~Sl~a~~l~~~l~~~ 1016 (1304)
T 2vsq_A 941 LPLTTNGKVNKRLLPKPDQDQLAEEWIGPRNEMEETIAQIWSEVLGR----KQIGIHDDFFALGGHALKAMTAASRIKKE 1016 (1304)
T ss_dssp CCCCSSCSSCCSCCCCCCGGGGCCCCCCCSSHHHHHHHHHHHHHHTC----SCCCTTCCTTTTTCCHHHHHHHHHHSSST
T ss_pred cCCCCCcccCHhhcCCcchhhhcccccCCCChHHHHHHHHHHHHcCC----CccCCCCCHHHhCCChHHHHHHHHHHHHH
Confidence 799999999999983321110 000 1122332233322 22333333322 999999999999999
Q ss_pred cCCCCccccccCCCCchh
Q psy6053 70 NNMNVPYETFYKPPVLSE 87 (614)
Q Consensus 70 ~~~~~~~~~~~~~~tl~~ 87 (614)
+|++++..++|++||+++
T Consensus 1017 ~g~~l~~~~~~~~~ti~~ 1034 (1304)
T 2vsq_A 1017 LGIDLPVKLLFEAPTIAG 1034 (1304)
T ss_dssp TSCCCCSSCTTTCCSHHH
T ss_pred hCCCCCHHHHHhCCCHHH
Confidence 999999999999999975
No 403
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=91.99 E-value=0.25 Score=50.71 Aligned_cols=37 Identities=24% Similarity=0.231 Sum_probs=31.0
Q ss_pred cCCcEEEEecccccccHHHHHHHHhh-CCCccEEEEEEccC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRK-SPNVKKIYILMRQK 139 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~-g~~v~~V~~LvR~~ 139 (614)
-.+++|+||||+|-+|..+++.+... |.+ |++..|++
T Consensus 169 ~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~---Vi~~~~~~ 206 (347)
T 1jvb_A 169 DPTKTLLVVGAGGGLGTMAVQIAKAVSGAT---IIGVDVRE 206 (347)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHHTCCE---EEEEESSH
T ss_pred CCCCEEEEECCCccHHHHHHHHHHHcCCCe---EEEEcCCH
Confidence 35789999999989999999988888 754 88888753
No 404
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=91.95 E-value=0.96 Score=45.66 Aligned_cols=113 Identities=9% Similarity=0.028 Sum_probs=71.6
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCCCC
Q psy6053 103 KTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAEAD 182 (614)
Q Consensus 103 ~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~~~ 182 (614)
++|.|+|| |.+|..++-.|+..+. +.+|.++++.+ +|++.... .+.+..+ ....+.+..+| .
T Consensus 1 ~KI~IiGa-G~vG~~~a~~l~~~~~-~~el~L~Di~~------~k~~g~a~-----dl~~~~~--~~~~~~v~~~~---~ 62 (310)
T 2xxj_A 1 MKVGIVGS-GMVGSATAYALALLGV-AREVVLVDLDR------KLAQAHAE-----DILHATP--FAHPVWVWAGS---Y 62 (310)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTC-CSEEEEECSSH------HHHHHHHH-----HHHTTGG--GSCCCEEEECC---G
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC-CCEEEEEeCCh------hHHHHHHH-----HHHHhHh--hcCCeEEEECC---H
Confidence 57999998 9999999999988864 56799888863 33331100 0111111 11233333332 1
Q ss_pred CCCCCHHHHHHHhccccEEEEcccccC-hhHHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEE
Q psy6053 183 ELAIKESDRQLLASEVDIMIHGAATIR-FDEALKKAVLLNTRGTKMMLSLAKEMKHLELFVHI 244 (614)
Q Consensus 183 ~lGLs~~~~~~l~~~vd~ViH~AA~v~-~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~v 244 (614)
+.++++|+||.+|+... ......+....|+.-.+.+.+.+.+. .....+.+
T Consensus 63 ----------~a~~~aD~Vii~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~iiv 114 (310)
T 2xxj_A 63 ----------GDLEGARAVVLAAGVAQRPGETRLQLLDRNAQVFAQVVPRVLEA-APEAVLLV 114 (310)
T ss_dssp ----------GGGTTEEEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEE
T ss_pred ----------HHhCCCCEEEECCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHH-CCCcEEEE
Confidence 23679999999998654 23334466788999999999888885 44554444
No 405
>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A
Probab=91.65 E-value=0.21 Score=51.77 Aligned_cols=36 Identities=25% Similarity=0.418 Sum_probs=27.9
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEEc
Q psy6053 102 GKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMR 137 (614)
Q Consensus 102 ~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR 137 (614)
+++|.|.||||++|..|++.|.+.++...++..+.-
T Consensus 2 ~~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as 37 (366)
T 3pwk_A 2 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLAS 37 (366)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEEC
T ss_pred CcEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEc
Confidence 368999999999999999988776544455666653
No 406
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=91.56 E-value=0.26 Score=52.90 Aligned_cols=71 Identities=21% Similarity=0.372 Sum_probs=52.3
Q ss_pred CCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCC
Q psy6053 101 TGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAE 180 (614)
Q Consensus 101 ~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~ 180 (614)
..|+|+|.|+ |-+|.+|++.|.+.|++ |.++.+.+ ++++++.+ .-.+..+.||-+
T Consensus 2 ~~M~iiI~G~-G~vG~~la~~L~~~~~~---v~vId~d~------~~~~~~~~---------------~~~~~~i~Gd~~ 56 (461)
T 4g65_A 2 NAMKIIILGA-GQVGGTLAENLVGENND---ITIVDKDG------DRLRELQD---------------KYDLRVVNGHAS 56 (461)
T ss_dssp CCEEEEEECC-SHHHHHHHHHTCSTTEE---EEEEESCH------HHHHHHHH---------------HSSCEEEESCTT
T ss_pred CcCEEEEECC-CHHHHHHHHHHHHCCCC---EEEEECCH------HHHHHHHH---------------hcCcEEEEEcCC
Confidence 3589999995 89999999999999887 77777652 34443311 124678999999
Q ss_pred CCCCCCCHHHHHHH-hccccEEE
Q psy6053 181 ADELAIKESDRQLL-ASEVDIMI 202 (614)
Q Consensus 181 ~~~lGLs~~~~~~l-~~~vd~Vi 202 (614)
+++ .++++ ++++|.++
T Consensus 57 ~~~------~L~~Agi~~ad~~i 73 (461)
T 4g65_A 57 HPD------VLHEAGAQDADMLV 73 (461)
T ss_dssp CHH------HHHHHTTTTCSEEE
T ss_pred CHH------HHHhcCCCcCCEEE
Confidence 976 56655 56899988
No 407
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=91.48 E-value=0.11 Score=46.04 Aligned_cols=34 Identities=15% Similarity=0.282 Sum_probs=28.7
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccC
Q psy6053 102 GKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQK 139 (614)
Q Consensus 102 ~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~ 139 (614)
+++|+|.|+ |.+|..++..|.+.|.+ |++..|..
T Consensus 21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~---v~v~~r~~ 54 (144)
T 3oj0_A 21 GNKILLVGN-GMLASEIAPYFSYPQYK---VTVAGRNI 54 (144)
T ss_dssp CCEEEEECC-SHHHHHHGGGCCTTTCE---EEEEESCH
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCE---EEEEcCCH
Confidence 789999995 99999999999887643 88888863
No 408
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=91.47 E-value=0.27 Score=53.90 Aligned_cols=98 Identities=15% Similarity=0.128 Sum_probs=59.1
Q ss_pred ccCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCH-------------HHHHHHHHhChhhHHhhhhcc
Q psy6053 99 TFTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNA-------------RQRIEELFASPLFNLLKSVHG 165 (614)
Q Consensus 99 ~~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~-------------~~Rl~~~~~~~~f~~l~~~~p 165 (614)
-.++++|+|.|+ |-+|+.+++.|.+.| |.+|.+++...=..+- +.+.+. .-+++++-.|
T Consensus 324 kL~~~kVLIVGa-GGLGs~va~~La~aG--VG~ItLvD~D~Ve~SNL~RQ~L~~~~DvG~~KAea-----aa~~L~~iNP 395 (598)
T 3vh1_A 324 IIKNTKVLLLGA-GTLGCYVSRALIAWG--VRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAEL-----AAASLKRIFP 395 (598)
T ss_dssp HHHTCEEEEECC-SHHHHHHHHHHHTTT--CCEEEEECCSBCCTTSTTTSTTCCSTTCSSBHHHH-----HHHHHHHHCT
T ss_pred HHhCCeEEEECC-CHHHHHHHHHHHHcC--CCEEEEECCCcccccccccccccchhhcCcHHHHH-----HHHHHHhHCC
Confidence 345789999995 569999999999997 6689888554210000 001111 0112333334
Q ss_pred ccccCeEEEEeCCCCCCCCCC--------CHHHHHHHhccccEEEEcccc
Q psy6053 166 QKIIDKVLPISGDAEADELAI--------KESDRQLLASEVDIMIHGAAT 207 (614)
Q Consensus 166 ~~~~~~v~~v~gDl~~~~lGL--------s~~~~~~l~~~vd~ViH~AA~ 207 (614)
. -+++.+..++..++..+ +.+...++++++|+||.|.-.
T Consensus 396 ~---v~v~~~~~~I~~pgh~i~~~~~~~l~~~~l~~li~~~DvVvdatDn 442 (598)
T 3vh1_A 396 L---MDATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDS 442 (598)
T ss_dssp T---CEEEEECCCCCCSSCCCCSHHHHHHHHHHHHHHHHHCSEEEECCSB
T ss_pred C---cEEEEEeccccccCcccccccccccCHHHHHHHHhcCCEEEECCCC
Confidence 3 46777776664443222 234566788899999997543
No 409
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=91.45 E-value=0.16 Score=55.34 Aligned_cols=35 Identities=31% Similarity=0.375 Sum_probs=27.3
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEcc
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQ 138 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~ 138 (614)
.++++++|||| |.+|+.++..|++.|.+ |++..|.
T Consensus 362 l~~k~vlV~Ga-GGig~aia~~L~~~G~~---V~i~~R~ 396 (523)
T 2o7s_A 362 LASKTVVVIGA-GGAGKALAYGAKEKGAK---VVIANRT 396 (523)
T ss_dssp ----CEEEECC-SHHHHHHHHHHHHHCC----CEEEESS
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCE---EEEEECC
Confidence 46789999999 68999999999999865 7888886
No 410
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=91.39 E-value=0.39 Score=45.62 Aligned_cols=33 Identities=15% Similarity=0.245 Sum_probs=28.6
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEEcc
Q psy6053 102 GKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQ 138 (614)
Q Consensus 102 ~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~ 138 (614)
+++|.|.| +|.+|+.+++.|.+.|++ |++..|+
T Consensus 28 ~~~I~iiG-~G~~G~~la~~l~~~g~~---V~~~~r~ 60 (215)
T 2vns_A 28 APKVGILG-SGDFARSLATRLVGSGFK---VVVGSRN 60 (215)
T ss_dssp -CCEEEEC-CSHHHHHHHHHHHHTTCC---EEEEESS
T ss_pred CCEEEEEc-cCHHHHHHHHHHHHCCCE---EEEEeCC
Confidence 57899999 899999999999999876 7778875
No 411
>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*
Probab=91.25 E-value=0.49 Score=42.56 Aligned_cols=74 Identities=14% Similarity=0.161 Sum_probs=46.2
Q ss_pred cccccHHHHHHHHhhCCCccEEEEEEccCCCcC----HHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCCCCCCCC
Q psy6053 111 SGFLGKVLLEKILRKSPNVKKIYILMRQKKGKN----ARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAEADELAI 186 (614)
Q Consensus 111 TGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~----~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~~~~lGL 186 (614)
+|.++...++.|.+.|.+ |++..|+..... ..+.+++ ...+...+.+|++++.
T Consensus 25 s~~p~~a~a~~La~~Ga~---vvi~~r~~~e~~~~~~~~~~~~~-----------------~G~~~~~i~~Dv~~~~--- 81 (157)
T 3gxh_A 25 SGLPNEQQFSLLKQAGVD---VVINLMPDSSKDAHPDEGKLVTQ-----------------AGMDYVYIPVDWQNPK--- 81 (157)
T ss_dssp EBCCCHHHHHHHHHTTCC---EEEECSCTTSTTSCTTHHHHHHH-----------------TTCEEEECCCCTTSCC---
T ss_pred cCCCCHHHHHHHHHcCCC---EEEECCCcccccccccHHHHHHH-----------------cCCeEEEecCCCCCCC---
Confidence 467899999999999877 444456543221 1111111 2245677889999872
Q ss_pred CHHHHHHHhc------cccEEEEccccc
Q psy6053 187 KESDRQLLAS------EVDIMIHGAATI 208 (614)
Q Consensus 187 s~~~~~~l~~------~vd~ViH~AA~v 208 (614)
+++++.+++ +-|++|||||..
T Consensus 82 -~~~v~~~~~~i~~~~G~dVLVnnAgg~ 108 (157)
T 3gxh_A 82 -VEDVEAFFAAMDQHKGKDVLVHCLANY 108 (157)
T ss_dssp -HHHHHHHHHHHHHTTTSCEEEECSBSH
T ss_pred -HHHHHHHHHHHHhcCCCCEEEECCCCC
Confidence 235555442 229999999864
No 412
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=91.18 E-value=0.38 Score=49.28 Aligned_cols=36 Identities=17% Similarity=0.256 Sum_probs=30.3
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCC
Q psy6053 102 GKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKK 140 (614)
Q Consensus 102 ~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~ 140 (614)
+++|+|+||+|-+|...++.+...|. +|++..|+..
T Consensus 165 ~~~vli~gg~g~vG~~a~qla~~~Ga---~Vi~~~~~~~ 200 (349)
T 3pi7_A 165 EKAFVMTAGASQLCKLIIGLAKEEGF---RPIVTVRRDE 200 (349)
T ss_dssp CSEEEESSTTSHHHHHHHHHHHHHTC---EEEEEESCGG
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCHH
Confidence 37999999999999999988888875 4888887653
No 413
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=91.14 E-value=0.32 Score=50.06 Aligned_cols=114 Identities=12% Similarity=0.123 Sum_probs=68.6
Q ss_pred ccCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcC-------------HHHHHHHHHhChhhHHhhhhcc
Q psy6053 99 TFTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKN-------------ARQRIEELFASPLFNLLKSVHG 165 (614)
Q Consensus 99 ~~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~-------------~~~Rl~~~~~~~~f~~l~~~~p 165 (614)
..++.+|+|.|+ |-+|+.+++.|.+.| |.+|.+++...-..+ ...|.+. .-+++++..|
T Consensus 33 ~L~~~~VlivG~-GGlG~~ia~~La~~G--vg~itlvD~d~V~~sNL~rq~~~~~~diG~~Ka~~-----~~~~l~~lnp 104 (346)
T 1y8q_A 33 RLRASRVLLVGL-KGLGAEIAKNLILAG--VKGLTMLDHEQVTPEDPGAQFLIRTGSVGRNRAEA-----SLERAQNLNP 104 (346)
T ss_dssp HHHTCEEEEECC-SHHHHHHHHHHHHHT--CSEEEEECCCBCCSSCGGGCTTSCSSCTTSBHHHH-----HHHHHHHTCT
T ss_pred HHhCCeEEEECC-CHHHHHHHHHHHHcC--CCEEEEEECCCcchhhCCCCCccccccCcCCHHHH-----HHHHHHhHCC
Confidence 345689999996 569999999999998 668888753210000 0011111 1123333344
Q ss_pred ccccCeEEEEeCCCCCCCCCCCHHHHHHHhccccEEEEcccccChhHHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEe
Q psy6053 166 QKIIDKVLPISGDAEADELAIKESDRQLLASEVDIMIHGAATIRFDEALKKAVLLNTRGTKMMLSLAKEMKHLELFVHIS 245 (614)
Q Consensus 166 ~~~~~~v~~v~gDl~~~~lGLs~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vS 245 (614)
. -++..+..++++ . ...+++++|+||.+... + ..-..+-++|.+. + +++|+.+
T Consensus 105 ~---v~v~~~~~~~~~-~-------~~~~~~~~dvVv~~~d~--~------------~~r~~ln~~~~~~-~-ip~i~~~ 157 (346)
T 1y8q_A 105 M---VDVKVDTEDIEK-K-------PESFFTQFDAVCLTCCS--R------------DVIVKVDQICHKN-S-IKFFTGD 157 (346)
T ss_dssp T---SEEEEECSCGGG-C-------CHHHHTTCSEEEEESCC--H------------HHHHHHHHHHHHT-T-CEEEEEE
T ss_pred C---eEEEEEecccCc-c-------hHHHhcCCCEEEEcCCC--H------------HHHHHHHHHHHHc-C-CCEEEEe
Confidence 4 467777777764 1 24567899999976432 1 1113456678874 3 6788776
Q ss_pred Cc
Q psy6053 246 TA 247 (614)
Q Consensus 246 T~ 247 (614)
+.
T Consensus 158 ~~ 159 (346)
T 1y8q_A 158 VF 159 (346)
T ss_dssp EE
T ss_pred ec
Confidence 65
No 414
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=91.05 E-value=0.14 Score=50.99 Aligned_cols=38 Identities=13% Similarity=0.200 Sum_probs=31.6
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKK 140 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~ 140 (614)
.++++|+|+|+ |-+|+.++..|.+.|.. +|++..|...
T Consensus 115 l~~k~vlvlGa-Gg~g~aia~~L~~~G~~--~v~v~~R~~~ 152 (277)
T 3don_A 115 IEDAYILILGA-GGASKGIANELYKIVRP--TLTVANRTMS 152 (277)
T ss_dssp GGGCCEEEECC-SHHHHHHHHHHHTTCCS--CCEEECSCGG
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCC--EEEEEeCCHH
Confidence 46889999996 88999999999999862 4888888753
No 415
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=91.04 E-value=0.83 Score=46.58 Aligned_cols=119 Identities=16% Similarity=0.141 Sum_probs=73.4
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
...++|.|+|| |.+|..++..|+..|. +..|.++++.... ++....++.+..-| + ...++ ...+|
T Consensus 17 ~~~~kV~ViGa-G~vG~~~a~~l~~~~~-~~el~L~Di~~~~--~~g~a~DL~~~~~~-------~--~~~~i-~~~~d- 81 (331)
T 4aj2_A 17 VPQNKITVVGV-GAVGMACAISILMKDL-ADELALVDVIEDK--LKGEMMDLQHGSLF-------L--KTPKI-VSSKD- 81 (331)
T ss_dssp CCSSEEEEECC-SHHHHHHHHHHHHTTC-CSEEEEECSCHHH--HHHHHHHHHHTGGG-------C--SCCEE-EECSS-
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCC-CceEEEEeCChHH--HHHHHHhhhhhhhc-------c--CCCeE-EEcCC-
Confidence 45689999997 9999999999998864 3568888875211 11111122111100 0 01112 12233
Q ss_pred CCCCCCCCHHHHHHHhccccEEEEcccccC-hhHHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEeC
Q psy6053 180 EADELAIKESDRQLLASEVDIMIHGAATIR-FDEALKKAVLLNTRGTKMMLSLAKEMKHLELFVHIST 246 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~~vd~ViH~AA~v~-~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vST 246 (614)
++ .++++|+||-+||..+ ..+...++++.|+.-.+.+.+.+.+. ....++.+-|
T Consensus 82 -----------~~-~~~~aDiVvi~aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~-~p~a~vlvvt 136 (331)
T 4aj2_A 82 -----------YS-VTANSKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKY-SPQCKLLIVS 136 (331)
T ss_dssp -----------GG-GGTTEEEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHH-CTTCEEEECS
T ss_pred -----------HH-HhCCCCEEEEccCCCCCCCccHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEec
Confidence 22 3679999999998754 23344567899999999999888885 4454444433
No 416
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=91.00 E-value=1.5 Score=44.05 Aligned_cols=108 Identities=13% Similarity=0.106 Sum_probs=67.0
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCCC
Q psy6053 102 GKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAEA 181 (614)
Q Consensus 102 ~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~~ 181 (614)
.++|.|.|| |.+|..+...|+..|. +..|.+.++.... .....++.. + ..+++.. .+|.
T Consensus 14 ~~kV~ViGa-G~vG~~~a~~l~~~g~-~~ev~L~Di~~~~---~g~a~dl~~------~-------~~~~i~~-t~d~-- 72 (303)
T 2i6t_A 14 VNKITVVGG-GELGIACTLAISAKGI-ADRLVLLDLSEGT---KGATMDLEI------F-------NLPNVEI-SKDL-- 72 (303)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECCC--------CHHHHHH------H-------TCTTEEE-ESCG--
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCC-CCEEEEEcCCcch---HHHHHHHhh------h-------cCCCeEE-eCCH--
Confidence 478999996 9999999999999986 4568888886531 111112111 0 1124544 2443
Q ss_pred CCCCCCHHHHHHHhccccEEEEcccccChhHHHHHHHHHhHHHHHHHHHHHHHcCCCceEE
Q psy6053 182 DELAIKESDRQLLASEVDIMIHGAATIRFDEALKKAVLLNTRGTKMMLSLAKEMKHLELFV 242 (614)
Q Consensus 182 ~~lGLs~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V 242 (614)
+.++++|+||-+|+.-.......+....|+.-.+.+.+.+.+. ....++
T Consensus 73 -----------~~l~~aD~Vi~aag~~~pG~tR~dl~~~n~~i~~~i~~~i~~~-~p~a~i 121 (303)
T 2i6t_A 73 -----------SASAHSKVVIFTVNSLGSSQSYLDVVQSNVDMFRALVPALGHY-SQHSVL 121 (303)
T ss_dssp -----------GGGTTCSEEEECCCC----CCHHHHHHHHHHHHHHHHHHHHHH-TTTCEE
T ss_pred -----------HHHCCCCEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEE
Confidence 2357999999999764322233456677888888888888875 344444
No 417
>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*
Probab=90.96 E-value=0.27 Score=51.04 Aligned_cols=39 Identities=15% Similarity=0.370 Sum_probs=29.2
Q ss_pred cEEEEecccccccHHHHHHHHhh-CCCccEEEEEEccCCC
Q psy6053 103 KTLFMTGASGFLGKVLLEKILRK-SPNVKKIYILMRQKKG 141 (614)
Q Consensus 103 ~~VLITGaTGFlG~~Ll~~Ll~~-g~~v~~V~~LvR~~~~ 141 (614)
++|.|-||||.+|+.|++.|+.+ ...+..|+.+.....+
T Consensus 2 ~kVaIvGAtG~vG~~llr~ll~~~~~~~v~i~~~~~~s~G 41 (367)
T 1t4b_A 2 QNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLG 41 (367)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTT
T ss_pred cEEEEECCCCHHHHHHHHHHHhcCCCCeEEEEEEEeCCCC
Confidence 58999999999999999966655 2245678777665333
No 418
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=90.84 E-value=0.37 Score=49.21 Aligned_cols=35 Identities=17% Similarity=0.133 Sum_probs=28.9
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEcc
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQ 138 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~ 138 (614)
-.|++|||+|| |-+|...++.+...|. +|++..|+
T Consensus 163 ~~g~~VlV~Ga-G~vG~~~~~~a~~~Ga---~Vi~~~~~ 197 (339)
T 1rjw_A 163 KPGEWVAIYGI-GGLGHVAVQYAKAMGL---NVVAVDIG 197 (339)
T ss_dssp CTTCEEEEECC-STTHHHHHHHHHHTTC---EEEEECSC
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCC---EEEEEeCC
Confidence 35789999999 6699999988877774 48888876
No 419
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=90.84 E-value=0.62 Score=46.74 Aligned_cols=37 Identities=22% Similarity=0.340 Sum_probs=31.2
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQK 139 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~ 139 (614)
.++++|+|+|+ |-+|+.++..|++.|. .+|++..|..
T Consensus 139 l~~~~vlVlGa-Gg~g~aia~~L~~~G~--~~V~v~nR~~ 175 (297)
T 2egg_A 139 LDGKRILVIGA-GGGARGIYFSLLSTAA--ERIDMANRTV 175 (297)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHTTTC--SEEEEECSSH
T ss_pred CCCCEEEEECc-HHHHHHHHHHHHHCCC--CEEEEEeCCH
Confidence 46899999997 7799999999999875 3688888863
No 420
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=90.82 E-value=0.32 Score=50.32 Aligned_cols=77 Identities=13% Similarity=0.176 Sum_probs=50.4
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
.++++|+|+|+ |-+|...+..+...|. +|++..|+. +|++.+.+. ....+..+.
T Consensus 165 l~~~~VlViGa-GgvG~~aa~~a~~~Ga---~V~v~dr~~------~r~~~~~~~-------------~~~~~~~~~--- 218 (361)
T 1pjc_A 165 VKPGKVVILGG-GVVGTEAAKMAVGLGA---QVQIFDINV------ERLSYLETL-------------FGSRVELLY--- 218 (361)
T ss_dssp BCCCEEEEECC-SHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHHHHH-------------HGGGSEEEE---
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCC---EEEEEeCCH------HHHHHHHHh-------------hCceeEeee---
Confidence 35689999998 9999999999999885 488888863 333322110 001122221
Q ss_pred CCCCCCCCHHHHHHHhccccEEEEccccc
Q psy6053 180 EADELAIKESDRQLLASEVDIMIHGAATI 208 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~~vd~ViH~AA~v 208 (614)
. +.+++.+.+.++|+||++++..
T Consensus 219 ~------~~~~~~~~~~~~DvVI~~~~~~ 241 (361)
T 1pjc_A 219 S------NSAEIETAVAEADLLIGAVLVP 241 (361)
T ss_dssp C------CHHHHHHHHHTCSEEEECCCCT
T ss_pred C------CHHHHHHHHcCCCEEEECCCcC
Confidence 1 1235666677999999998753
No 421
>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A
Probab=90.78 E-value=0.35 Score=49.59 Aligned_cols=35 Identities=17% Similarity=0.320 Sum_probs=26.7
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEE
Q psy6053 102 GKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILM 136 (614)
Q Consensus 102 ~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~Lv 136 (614)
|++|.|.||||++|..|++.|.++.+...++..+.
T Consensus 1 ~~~VaIvGatG~vG~el~~lL~~h~fp~~el~~~~ 35 (344)
T 3tz6_A 1 GLSIGIVGATGQVGQVMRTLLDERDFPASAVRFFA 35 (344)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCCceEEEEEE
Confidence 46899999999999999997766533444566665
No 422
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=90.67 E-value=0.42 Score=48.80 Aligned_cols=98 Identities=15% Similarity=0.099 Sum_probs=59.3
Q ss_pred ccCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHH-------------HHHHHHHhChhhHHhhhhcc
Q psy6053 99 TFTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNAR-------------QRIEELFASPLFNLLKSVHG 165 (614)
Q Consensus 99 ~~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~-------------~Rl~~~~~~~~f~~l~~~~p 165 (614)
..++++|+|.|+ |-+|+.+++.|.+.| |.+|.++++..-..+-. .|.+. .-+++++-+|
T Consensus 31 kL~~~~VlIvGa-GGlGs~va~~La~aG--Vg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~a-----aa~~L~~inP 102 (340)
T 3rui_A 31 IIKNTKVLLLGA-GTLGCYVSRALIAWG--VRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAEL-----AAASLKRIFP 102 (340)
T ss_dssp HHHTCEEEEECC-SHHHHHHHHHHHHTT--CCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHH-----HHHHHHHHCT
T ss_pred HHhCCEEEEECC-CHHHHHHHHHHHHcC--CCEEEEecCCEeccccccccccCChhhcChHHHHH-----HHHHHHHhCC
Confidence 355789999995 669999999999997 66898887754111000 01111 1123333344
Q ss_pred ccccCeEEEEeCCCCCCCCC--------CCHHHHHHHhccccEEEEcccc
Q psy6053 166 QKIIDKVLPISGDAEADELA--------IKESDRQLLASEVDIMIHGAAT 207 (614)
Q Consensus 166 ~~~~~~v~~v~gDl~~~~lG--------Ls~~~~~~l~~~vd~ViH~AA~ 207 (614)
. -+++.+..++..+..- ++.+....+++++|+||.+.-.
T Consensus 103 ~---v~v~~~~~~i~~~g~~~~~~~~~~~~~~~l~~~l~~~DlVvd~tDn 149 (340)
T 3rui_A 103 L---MDATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDS 149 (340)
T ss_dssp T---CEEEEECCCCCCTTSCCSCHHHHHHHHHHHHHHHHHCSEEEECCSS
T ss_pred C---CEEEEEeccccccCcccchhhhhcCCHHHHHhhhccCCEEEecCCC
Confidence 4 4566666665433221 1233456778899999998654
No 423
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=90.37 E-value=0.17 Score=50.80 Aligned_cols=38 Identities=13% Similarity=0.247 Sum_probs=31.6
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKK 140 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~ 140 (614)
-.|++|+|+||+|-+|...++.+...|. +|++..|+..
T Consensus 124 ~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga---~Vi~~~~~~~ 161 (302)
T 1iz0_A 124 RPGEKVLVQAAAGALGTAAVQVARAMGL---RVLAAASRPE 161 (302)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHTTC---EEEEEESSGG
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCHH
Confidence 3578999999999999999988877774 4889988643
No 424
>2cq8_A 10-formyltetrahydrofolate dehydrogenase; 10-FTHFDH, PP-binding, acyl carrier protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=90.31 E-value=0.11 Score=44.02 Aligned_cols=43 Identities=16% Similarity=0.290 Sum_probs=35.7
Q ss_pred CCCchhhhh---hhhHHHHHHHHHHhhcC-CCCccccccCCCCchhh
Q psy6053 46 FSLPLEFIR---CEVIVSELVMAANKVNN-MNVPYETFYKPPVLSEE 88 (614)
Q Consensus 46 ~~~~~~~~~---~s~~~~~l~~~l~~~~~-~~~~~~~~~~~~tl~~~ 88 (614)
+...-+|+. +|+.+++|+..|++.++ +++++.++|++||+++-
T Consensus 44 i~~~ddFF~lGG~SLla~rLv~~ir~~~g~v~l~l~~Lf~~pTl~~l 90 (110)
T 2cq8_A 44 VEDSTDFFKSGAASVDVVRLVEEVKELCDGLELENEDVYMASTFGDF 90 (110)
T ss_dssp CCTTCBHHHHHCCTTHHHHHHHHHHHHHTSCCCCHHHHHHCCBHHHH
T ss_pred CCCCCCHHhcCChHHHHHHHHHHHHHHcCCCCcCHHHHHhCCCHHHH
Confidence 444444433 99999999999999999 99999999999999753
No 425
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=89.72 E-value=0.49 Score=49.06 Aligned_cols=36 Identities=22% Similarity=0.357 Sum_probs=29.0
Q ss_pred ccCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEc
Q psy6053 99 TFTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMR 137 (614)
Q Consensus 99 ~~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR 137 (614)
.-.|++|||+||+|-+|...++.+...|. +|++..+
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga---~Vi~~~~ 216 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAWDA---HVTAVCS 216 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEEC
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhCCC---EEEEEeC
Confidence 34578999999999999999887777764 4777764
No 426
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=89.72 E-value=0.5 Score=51.89 Aligned_cols=103 Identities=16% Similarity=0.074 Sum_probs=60.5
Q ss_pred ccCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHH--------HHHHhChhhHHhhhhccccccC
Q psy6053 99 TFTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRI--------EELFASPLFNLLKSVHGQKIID 170 (614)
Q Consensus 99 ~~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl--------~~~~~~~~f~~l~~~~p~~~~~ 170 (614)
-.++.+|+|.|+ |-+|+.+++.|.+.| |.+|.++++..-..+-..|- ..-.....-+++++-.|. -
T Consensus 323 kL~~arVLIVGa-GGLGs~vA~~La~aG--VG~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L~~iNP~---V 396 (615)
T 4gsl_A 323 IIKNTKVLLLGA-GTLGCYVSRALIAWG--VRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPL---M 396 (615)
T ss_dssp HHHTCEEEEECC-SHHHHHHHHHHHHTT--CCEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHHHHHCTT---C
T ss_pred HHhCCeEEEECC-CHHHHHHHHHHHHcC--CCEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHHHHhhCCC---c
Confidence 356789999996 669999999999997 66898888764211100000 000000011233333444 4
Q ss_pred eEEEEeCCCCCCCCC--------CCHHHHHHHhccccEEEEcccc
Q psy6053 171 KVLPISGDAEADELA--------IKESDRQLLASEVDIMIHGAAT 207 (614)
Q Consensus 171 ~v~~v~gDl~~~~lG--------Ls~~~~~~l~~~vd~ViH~AA~ 207 (614)
+++.+..++..+..- ++.+....+++++|+||.|.-.
T Consensus 397 ~v~~~~~~Ipm~gh~v~~e~~~~l~~~~l~~ll~~~DlVvd~tDn 441 (615)
T 4gsl_A 397 DATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDS 441 (615)
T ss_dssp EEEEECCCCCCTTCCCSCHHHHHHHHHHHHHHHHHCSEEEECCSS
T ss_pred EEEEeeccccccCccccchhhhcCCHHHHHHHhhcCCEEEecCCC
Confidence 566777666433211 2234566778899999998654
No 427
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=89.68 E-value=0.55 Score=46.59 Aligned_cols=35 Identities=20% Similarity=0.396 Sum_probs=29.6
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEc
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMR 137 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR 137 (614)
.+|++++|.|++|.+|+.++..|++.|.. |+...|
T Consensus 158 l~Gk~vvVvGrs~iVG~p~A~lL~~~gAt---Vtv~h~ 192 (285)
T 3p2o_A 158 LEGKDAVIIGASNIVGRPMATMLLNAGAT---VSVCHI 192 (285)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHHTTCE---EEEECT
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCe---EEEEeC
Confidence 57999999999999999999999998755 555443
No 428
>3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis}
Probab=89.57 E-value=0.72 Score=47.85 Aligned_cols=36 Identities=14% Similarity=0.286 Sum_probs=26.3
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCC-ccEEEEEEc
Q psy6053 102 GKTLFMTGASGFLGKVLLEKILRKSPN-VKKIYILMR 137 (614)
Q Consensus 102 ~~~VLITGaTGFlG~~Ll~~Ll~~g~~-v~~V~~LvR 137 (614)
+++|-|.||||++|..|++.||...+- ..++..+.-
T Consensus 4 ~~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss 40 (377)
T 3uw3_A 4 SMNVGLVGWRGMVGSVLMQRMQEEGDFDLIEPVFFST 40 (377)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEES
T ss_pred CCEEEEECCCCHHHHHHHHHHHhhCCCCceEEEEEec
Confidence 468999999999999999966666441 235655543
No 429
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=89.57 E-value=0.4 Score=48.47 Aligned_cols=37 Identities=11% Similarity=0.261 Sum_probs=29.9
Q ss_pred ccCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEcc
Q psy6053 99 TFTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQ 138 (614)
Q Consensus 99 ~~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~ 138 (614)
.-.|.+|+|+||+|-+|...+.-+...|. +|++.+++
T Consensus 150 ~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga---~vi~~~~~ 186 (321)
T 3tqh_A 150 VKQGDVVLIHAGAGGVGHLAIQLAKQKGT---TVITTASK 186 (321)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTC---EEEEEECH
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHcCC---EEEEEecc
Confidence 34688999999999999999988877775 47777654
No 430
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=89.45 E-value=0.39 Score=53.28 Aligned_cols=122 Identities=11% Similarity=0.121 Sum_probs=72.9
Q ss_pred cccCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHH-----HHH---HhChhhHHhhhhcccccc
Q psy6053 98 ETFTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRI-----EEL---FASPLFNLLKSVHGQKII 169 (614)
Q Consensus 98 ~~~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl-----~~~---~~~~~f~~l~~~~p~~~~ 169 (614)
+..++.+|+|.|+ |-+|..+++.|.+.| |.+|.+++...=..+-..|- .++ .....-+++++-.|.
T Consensus 13 ~kL~~s~VlVVGa-GGLGsevak~La~aG--VG~ItlvD~D~Ve~SNLnRQflf~~~dVGk~KAeaaa~~L~~iNP~--- 86 (640)
T 1y8q_B 13 EAVAGGRVLVVGA-GGIGCELLKNLVLTG--FSHIDLIDLDTIDVSNLNRQFLFQKKHVGRSKAQVAKESVLQFYPK--- 86 (640)
T ss_dssp HHHHHCEEEEECC-SHHHHHHHHHHHHHT--CCEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHTTCTT---
T ss_pred HHHhcCeEEEECc-CHHHHHHHHHHHHcC--CCeEEEecCCEEChhhcCCCcCCChhHcChHHHHHHHHHHHHHCCC---
Confidence 3345689999996 669999999999998 56888887654211111110 000 000111234444454
Q ss_pred CeEEEEeCCCCCCCCCCCHHHHHHHhccccEEEEcccccChhHHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEeCc
Q psy6053 170 DKVLPISGDAEADELAIKESDRQLLASEVDIMIHGAATIRFDEALKKAVLLNTRGTKMMLSLAKEMKHLELFVHISTA 247 (614)
Q Consensus 170 ~~v~~v~gDl~~~~lGLs~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vST~ 247 (614)
-+|+.+..+++..++ -..+++++|+||.+... + ..-..+-+.|.+. + +++|+.++.
T Consensus 87 v~V~a~~~~i~~~~~------~~~~~~~~DlVvda~Dn--~------------~aR~~ln~~c~~~-~-iPlI~~g~~ 142 (640)
T 1y8q_B 87 ANIVAYHDSIMNPDY------NVEFFRQFILVMNALDN--R------------AARNHVNRMCLAA-D-VPLIESGTA 142 (640)
T ss_dssp CEEEEEESCTTSTTS------CHHHHTTCSEEEECCSC--H------------HHHHHHHHHHHHH-T-CCEEEEEEE
T ss_pred CeEEEEecccchhhh------hHhhhcCCCEEEECCCC--H------------HHHHHHHHHHHHc-C-CCEEEEEEe
Confidence 578888888876542 23567899999987432 1 1123455667764 3 567777665
No 431
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=89.44 E-value=1.9 Score=43.74 Aligned_cols=118 Identities=12% Similarity=0.118 Sum_probs=72.5
Q ss_pred CCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCC
Q psy6053 101 TGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAE 180 (614)
Q Consensus 101 ~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~ 180 (614)
..++|.|+|| |.+|..++..|+..|. +..|.++++.... ++....++.+...| + ...++.. .+|..
T Consensus 20 ~~~kV~ViGa-G~vG~~~a~~la~~g~-~~ev~L~Di~~~~--~~g~a~DL~~~~~~-------~--~~~~i~~-t~d~~ 85 (330)
T 3ldh_A 20 SYNKITVVGC-DAVGMADAISVLMKDL-ADEVALVDVMEDK--LKGEMMDLEHGSLF-------L--HTAKIVS-GKDYS 85 (330)
T ss_dssp CCCEEEEEST-THHHHHHHHHHHHHCC-CSEEEEECSCHHH--HHHHHHHHHHHGGG-------S--CCSEEEE-ESSSC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCC-CCeEEEEECCHHH--HHHHHHHhhhhhhc-------c--cCCeEEE-cCCHH
Confidence 3578999998 9999999999999875 3468888874321 11111112111000 1 1123322 34543
Q ss_pred CCCCCCCHHHHHHHhccccEEEEcccccCh-hHHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEEeC
Q psy6053 181 ADELAIKESDRQLLASEVDIMIHGAATIRF-DEALKKAVLLNTRGTKMMLSLAKEMKHLELFVHIST 246 (614)
Q Consensus 181 ~~~lGLs~~~~~~l~~~vd~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~vST 246 (614)
+ ++++|+||-+||..+- .+...+++..|+.-.+.+.+.+.+. ....++.+-|
T Consensus 86 ~-------------~~daDiVIitaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~-~P~a~ilvvt 138 (330)
T 3ldh_A 86 V-------------SAGSKLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKH-SPDCLKELHP 138 (330)
T ss_dssp S-------------CSSCSEEEECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHH-CTTCEEEECS
T ss_pred H-------------hCCCCEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhh-CCCceEEeCC
Confidence 2 4789999999987542 2333456788888888998888885 4455444433
No 432
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=89.32 E-value=0.43 Score=48.80 Aligned_cols=33 Identities=21% Similarity=0.498 Sum_probs=28.0
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEE
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYIL 135 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~L 135 (614)
-.|++|||+||+|-+|...++.+...|.+ |++.
T Consensus 149 ~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~---Vi~~ 181 (343)
T 3gaz_A 149 QDGQTVLIQGGGGGVGHVAIQIALARGAR---VFAT 181 (343)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEE
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCCCE---EEEE
Confidence 35889999999999999999888888754 7777
No 433
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=89.17 E-value=1.2 Score=44.79 Aligned_cols=113 Identities=10% Similarity=0.113 Sum_probs=63.8
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCCCC
Q psy6053 103 KTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAEAD 182 (614)
Q Consensus 103 ~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~~~ 182 (614)
|+|.|.|| |.+|..++..|+..|+ +..|.+.++.+ +|++.... .+.+..+ ....+.+..+|
T Consensus 1 mkI~VIGa-G~vG~~la~~la~~g~-~~eV~L~D~~~------~~~~~~~~-----~l~~~~~--~~~~~~i~~~~---- 61 (304)
T 2v6b_A 1 MKVGVVGT-GFVGSTAAFALVLRGS-CSELVLVDRDE------DRAQAEAE-----DIAHAAP--VSHGTRVWHGG---- 61 (304)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTC-CSEEEEECSSH------HHHHHHHH-----HHTTSCC--TTSCCEEEEEC----
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC-CCEEEEEeCCH------HHHHHHHH-----hhhhhhh--hcCCeEEEECC----
Confidence 57999998 9999999999999876 34588888863 23321100 0110001 11122222222
Q ss_pred CCCCCHHHHHHHhccccEEEEcccccC-hhHHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEE
Q psy6053 183 ELAIKESDRQLLASEVDIMIHGAATIR-FDEALKKAVLLNTRGTKMMLSLAKEMKHLELFVHI 244 (614)
Q Consensus 183 ~lGLs~~~~~~l~~~vd~ViH~AA~v~-~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~v 244 (614)
+ +.++++|+||-+++... ......+....|+.-.+.+.+...+. .....+.+
T Consensus 62 --------~-~a~~~aDvVIi~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~~~vi~ 114 (304)
T 2v6b_A 62 --------H-SELADAQVVILTAGANQKPGESRLDLLEKNADIFRELVPQITRA-APDAVLLV 114 (304)
T ss_dssp --------G-GGGTTCSEEEECC------------CHHHHHHHHHHHHHHHHHH-CSSSEEEE
T ss_pred --------H-HHhCCCCEEEEcCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHh-CCCeEEEE
Confidence 1 23578999999997543 22333456678888888888888875 44444444
No 434
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=88.76 E-value=1.1 Score=45.46 Aligned_cols=115 Identities=14% Similarity=0.100 Sum_probs=67.9
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCCC
Q psy6053 102 GKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAEA 181 (614)
Q Consensus 102 ~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~~ 181 (614)
.++|.|+|| |.+|..++..|+..+. +.+|++.++... +++.. ...+-+ ..+. ....+.+..+|
T Consensus 6 ~~kI~IIGa-G~vG~sla~~l~~~~~-~~ev~l~Di~~~------~~~~~-~~dl~~----~~~~-~~~~~~i~~~~--- 68 (316)
T 1ldn_A 6 GARVVVIGA-GFVGASYVFALMNQGI-ADEIVLIDANES------KAIGD-AMDFNH----GKVF-APKPVDIWHGD--- 68 (316)
T ss_dssp SCEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECSSHH------HHHHH-HHHHHH----HTTS-SSSCCEEEECC---
T ss_pred CCEEEEECc-CHHHHHHHHHHHhCCC-CCEEEEEeCCcc------hHHHH-HhhHHH----Hhhh-cCCCeEEEcCc---
Confidence 468999998 9999999999988864 457988888632 22211 000111 1111 11133333322
Q ss_pred CCCCCCHHHHHHHhccccEEEEcccccCh-hHHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEE
Q psy6053 182 DELAIKESDRQLLASEVDIMIHGAATIRF-DEALKKAVLLNTRGTKMMLSLAKEMKHLELFVHI 244 (614)
Q Consensus 182 ~~lGLs~~~~~~l~~~vd~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~v 244 (614)
. +.++++|+||-+++...- .....+....|..-.+.+.+.+.+. .....+.+
T Consensus 69 ---------~-~al~~aDvViia~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~~iv 121 (316)
T 1ldn_A 69 ---------Y-DDCRDADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMAS-GFQGLFLV 121 (316)
T ss_dssp ---------G-GGTTTCSEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHH-TCCSEEEE
T ss_pred ---------H-HHhCCCCEEEEcCCCCCCCCCCHHHHHHcChHHHHHHHHHHHHH-CCCCEEEE
Confidence 1 235789999999876432 1112234567777778888887775 34444444
No 435
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=88.65 E-value=0.47 Score=48.84 Aligned_cols=38 Identities=16% Similarity=0.135 Sum_probs=30.4
Q ss_pred cCC-cEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCC
Q psy6053 100 FTG-KTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKK 140 (614)
Q Consensus 100 ~~~-~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~ 140 (614)
-.| .+|||+||+|-+|...+.-+...|.+ |++.+++..
T Consensus 165 ~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~---vi~~~~~~~ 203 (364)
T 1gu7_A 165 TPGKDWFIQNGGTSAVGKYASQIGKLLNFN---SISVIRDRP 203 (364)
T ss_dssp CTTTCEEEESCTTSHHHHHHHHHHHHHTCE---EEEEECCCT
T ss_pred CCCCcEEEECCCCcHHHHHHHHHHHHCCCE---EEEEecCcc
Confidence 357 89999999999999988877777754 778887654
No 436
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=88.60 E-value=0.23 Score=50.88 Aligned_cols=35 Identities=17% Similarity=0.273 Sum_probs=29.9
Q ss_pred CCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEcc
Q psy6053 101 TGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQ 138 (614)
Q Consensus 101 ~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~ 138 (614)
.|++|+|+||+|-+|...++.+...|. +|++.+++
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga---~Vi~~~~~ 184 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGL---RVITTASR 184 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC---EEEEECCS
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCC---EEEEEeCC
Confidence 588999999999999999988877774 48888875
No 437
>1or5_A Acyl carrier protein; ACP, biosynthesis, frenolicin, holo, polyketide synthase, PKS, biosynthetic protein; NMR {Streptomyces roseofulvus} SCOP: a.28.1.1
Probab=88.52 E-value=0.13 Score=40.80 Aligned_cols=35 Identities=11% Similarity=-0.016 Sum_probs=31.1
Q ss_pred hhhHHHHHHHHHHhhcCCCCccccccCCCCchhhh
Q psy6053 55 CEVIVSELVMAANKVNNMNVPYETFYKPPVLSEEY 89 (614)
Q Consensus 55 ~s~~~~~l~~~l~~~~~~~~~~~~~~~~~tl~~~~ 89 (614)
+|+.+.+|...+++.+|+.+|...+++.+|+.+-.
T Consensus 39 DSL~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~ 73 (83)
T 1or5_A 39 DSLALLETAAVLQQRYGIALTDETVGRLGTPRELL 73 (83)
T ss_dssp CHHHHHHHHHHHHTTSCCCCSHHHHHHCCCSHHHH
T ss_pred CHHHHHHHHHHHHHHHCCccCHHHHhccCCHHHHH
Confidence 88899999999999999999999998999987643
No 438
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=88.48 E-value=0.64 Score=47.57 Aligned_cols=35 Identities=23% Similarity=0.348 Sum_probs=29.6
Q ss_pred CCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEcc
Q psy6053 101 TGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQ 138 (614)
Q Consensus 101 ~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~ 138 (614)
.|++|||+|| |-+|...++.+...|.. +|++.+|+
T Consensus 167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~--~Vi~~~~~ 201 (348)
T 2d8a_A 167 SGKSVLITGA-GPLGLLGIAVAKASGAY--PVIVSEPS 201 (348)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHHTTCC--SEEEECSC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCC--EEEEECCC
Confidence 6889999999 99999999888878761 48888886
No 439
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=88.25 E-value=0.19 Score=50.28 Aligned_cols=37 Identities=30% Similarity=0.509 Sum_probs=29.3
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccC
Q psy6053 102 GKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQK 139 (614)
Q Consensus 102 ~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~ 139 (614)
..+|.|.||+|-+|+.+++.+.+. +++.-|-+++|+.
T Consensus 21 ~irV~V~Ga~GrMGr~i~~~v~~~-~~~eLvg~vd~~~ 57 (288)
T 3ijp_A 21 SMRLTVVGANGRMGRELITAIQRR-KDVELCAVLVRKG 57 (288)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTC-SSEEEEEEBCCTT
T ss_pred CeEEEEECCCCHHHHHHHHHHHhC-CCCEEEEEEecCC
Confidence 468999999999999999998876 6754455556653
No 440
>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A
Probab=87.99 E-value=0.63 Score=48.19 Aligned_cols=34 Identities=15% Similarity=0.321 Sum_probs=25.2
Q ss_pred cEEEEecccccccHHHHHHHHhhCCC-ccEEEEEE
Q psy6053 103 KTLFMTGASGFLGKVLLEKILRKSPN-VKKIYILM 136 (614)
Q Consensus 103 ~~VLITGaTGFlG~~Ll~~Ll~~g~~-v~~V~~Lv 136 (614)
++|-|.||||++|..|++.||...+- ..++..+.
T Consensus 1 ~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~s 35 (370)
T 3pzr_A 1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFS 35 (370)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCCCceEEEEEe
Confidence 47999999999999999966665441 23565554
No 441
>4i4d_A Peptide synthetase NRPS type II-PCP; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MLY; 2.10A {Streptomyces verticillus}
Probab=87.75 E-value=0.16 Score=41.44 Aligned_cols=34 Identities=0% Similarity=0.068 Sum_probs=32.1
Q ss_pred hhhHHHHHHHHHHhhcCCCCccccccCCCCchhh
Q psy6053 55 CEVIVSELVMAANKVNNMNVPYETFYKPPVLSEE 88 (614)
Q Consensus 55 ~s~~~~~l~~~l~~~~~~~~~~~~~~~~~tl~~~ 88 (614)
+|+.+++|+..+++.+|+.++..++|++||++.-
T Consensus 46 dSL~a~~l~~~l~~~~g~~l~~~~l~~~pTi~~l 79 (93)
T 4i4d_A 46 NSIHAIXITNRVEELVDAELSIRVLLETRTVAGM 79 (93)
T ss_dssp CHHHHHHHHHHHHHHHTSCCCHHHHHHHCSHHHH
T ss_pred cHHHHHHHHHHHHHHhCCCCCHHHHHcCCCHHHH
Confidence 9999999999999999999999999999999753
No 442
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=87.59 E-value=0.97 Score=45.16 Aligned_cols=35 Identities=17% Similarity=0.401 Sum_probs=30.1
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEc
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMR 137 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR 137 (614)
.+|++++|.|++|.+|+.++..|++.|.. |+...|
T Consensus 163 l~Gk~vvVIG~s~iVG~p~A~lL~~~gAt---Vtv~~~ 197 (300)
T 4a26_A 163 MAGKRAVVLGRSNIVGAPVAALLMKENAT---VTIVHS 197 (300)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHHTTCE---EEEECT
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCe---EEEEeC
Confidence 57999999999999999999999999765 666555
No 443
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=87.48 E-value=0.95 Score=44.89 Aligned_cols=35 Identities=23% Similarity=0.320 Sum_probs=29.4
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEc
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMR 137 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR 137 (614)
.+|++++|.|++|.+|+.++..|++.|.. |+...|
T Consensus 159 l~Gk~vvVIG~s~iVG~p~A~lL~~~gAt---Vtv~hs 193 (285)
T 3l07_A 159 TEGAYAVVVGASNVVGKPVSQLLLNAKAT---VTTCHR 193 (285)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHHTTCE---EEEECT
T ss_pred CCCCEEEEECCCchhHHHHHHHHHHCCCe---EEEEeC
Confidence 57999999999999999999999998755 555443
No 444
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=87.42 E-value=2.9 Score=42.01 Aligned_cols=113 Identities=15% Similarity=0.023 Sum_probs=66.6
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCCCC
Q psy6053 103 KTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAEAD 182 (614)
Q Consensus 103 ~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~~~ 182 (614)
|+|.|.|| |.+|..++..|.+.+. ..+|.+.+|.+.. .+.+..-+...... . . ...++... .|
T Consensus 1 mkI~VIGa-G~vG~~la~~la~~~~-g~~V~l~D~~~~~---~~~~~~~l~~~~~~-----~-~-~~~~i~~t-~d---- 63 (310)
T 1guz_A 1 MKITVIGA-GNVGATTAFRLAEKQL-ARELVLLDVVEGI---PQGKALDMYESGPV-----G-L-FDTKVTGS-ND---- 63 (310)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTC-CSEEEEECSSSSH---HHHHHHHHHTTHHH-----H-T-CCCEEEEE-SC----
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC-CCEEEEEeCChhH---HHHHHHhHHhhhhc-----c-c-CCcEEEEC-CC----
Confidence 57999998 9999999999888632 2358899887532 12221111111000 0 0 11223221 22
Q ss_pred CCCCCHHHHHHHhccccEEEEcccccCh-hHHHHHHHHHhHHHHHHHHHHHHHcCCCceEE
Q psy6053 183 ELAIKESDRQLLASEVDIMIHGAATIRF-DEALKKAVLLNTRGTKMMLSLAKEMKHLELFV 242 (614)
Q Consensus 183 ~lGLs~~~~~~l~~~vd~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V 242 (614)
++. ++++|+||-+++.... .....++...|+.-.+.+.+.+.+. .....+
T Consensus 64 --------~~~-l~~aDvViiav~~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~~~~~v 114 (310)
T 1guz_A 64 --------YAD-TANSDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKH-SKNPII 114 (310)
T ss_dssp --------GGG-GTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CSSCEE
T ss_pred --------HHH-HCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCcEE
Confidence 223 5789999999976432 2224467788888888888888775 334433
No 445
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=87.35 E-value=0.94 Score=46.56 Aligned_cols=38 Identities=18% Similarity=0.225 Sum_probs=30.9
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKG 141 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~ 141 (614)
-.|.+|||+|| |-+|...+.-+...|. +|++..|++..
T Consensus 178 ~~g~~VlV~Ga-G~vG~~~~qlak~~Ga---~Vi~~~~~~~~ 215 (360)
T 1piw_A 178 GPGKKVGIVGL-GGIGSMGTLISKAMGA---ETYVISRSSRK 215 (360)
T ss_dssp STTCEEEEECC-SHHHHHHHHHHHHHTC---EEEEEESSSTT
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCC---EEEEEcCCHHH
Confidence 35789999999 9999999887777775 38999987654
No 446
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=87.07 E-value=3.6 Score=41.15 Aligned_cols=114 Identities=8% Similarity=0.092 Sum_probs=65.1
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCCCC
Q psy6053 103 KTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAEAD 182 (614)
Q Consensus 103 ~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~~~ 182 (614)
|+|.|.| +|.+|..++..|++.|. ..+|++.+|.. ++++.+... +.+..+. ....+.+...|.
T Consensus 2 ~kI~VIG-aG~~G~~la~~L~~~g~-~~~V~l~d~~~------~~~~~~~~~-----l~~~~~~-~~~~~~~~~~d~--- 64 (309)
T 1hyh_A 2 RKIGIIG-LGNVGAAVAHGLIAQGV-ADDYVFIDANE------AKVKADQID-----FQDAMAN-LEAHGNIVINDW--- 64 (309)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHHTC-CSEEEEECSSH------HHHHHHHHH-----HHHHGGG-SSSCCEEEESCG---
T ss_pred CEEEEEC-CCHHHHHHHHHHHhCCC-CCEEEEEcCCH------HHHHHHHHH-----HHhhhhh-cCCCeEEEeCCH---
Confidence 6899999 79999999999999983 24588888863 223222110 0000000 111233323332
Q ss_pred CCCCCHHHHHHHhccccEEEEcccccC-----hhHHHHHHHHHhHHHHHHHHHHHHHcCCCceEEEE
Q psy6053 183 ELAIKESDRQLLASEVDIMIHGAATIR-----FDEALKKAVLLNTRGTKMMLSLAKEMKHLELFVHI 244 (614)
Q Consensus 183 ~lGLs~~~~~~l~~~vd~ViH~AA~v~-----~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~v 244 (614)
+.++++|+||-++.... ......+....|+.-.+.+++...+. .....+.+
T Consensus 65 ----------~~~~~aDvViiav~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~-~~~~~ii~ 120 (309)
T 1hyh_A 65 ----------AALADADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKES-GFHGVLVV 120 (309)
T ss_dssp ----------GGGTTCSEEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHT-TCCSEEEE
T ss_pred ----------HHhCCCCEEEEecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCcEEEE
Confidence 23578999999887643 12222234567777778888877764 33444433
No 447
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=86.99 E-value=0.98 Score=44.78 Aligned_cols=34 Identities=18% Similarity=0.302 Sum_probs=28.9
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEE
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILM 136 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~Lv 136 (614)
.+|++++|.|++|.+|+.++..|++.|.. |+...
T Consensus 159 l~Gk~vvVvGrs~iVG~plA~lL~~~gAt---Vtv~h 192 (286)
T 4a5o_A 159 LYGMDAVVVGASNIVGRPMALELLLGGCT---VTVTH 192 (286)
T ss_dssp CTTCEEEEECTTSTTHHHHHHHHHHTTCE---EEEEC
T ss_pred CCCCEEEEECCCchhHHHHHHHHHHCCCe---EEEEe
Confidence 47999999999999999999999998755 55543
No 448
>1dny_A Non-ribosomal peptide synthetase peptidyl carrier protein; four-helix bundle, modular enzyme, domain, flexible region; NMR {Brevibacillus brevis} SCOP: a.28.1.2 PDB: 2gdw_A 2gdx_A 2gdy_A 2k2q_A
Probab=86.98 E-value=0.23 Score=40.39 Aligned_cols=34 Identities=6% Similarity=0.266 Sum_probs=32.2
Q ss_pred hhhHHHHHHHHHHhhcCCCCccccccCCCCchhh
Q psy6053 55 CEVIVSELVMAANKVNNMNVPYETFYKPPVLSEE 88 (614)
Q Consensus 55 ~s~~~~~l~~~l~~~~~~~~~~~~~~~~~tl~~~ 88 (614)
+|+.+++|+..+++.+|++++..++|++||+++-
T Consensus 44 dSL~a~~l~~~l~~~~g~~l~~~~l~~~~Ti~~l 77 (91)
T 1dny_A 44 HSLKAMAVAAQVHREYQVELPLKVLFAQPTIKAL 77 (91)
T ss_dssp SSHHHHHHHHHHHHHCCCCCCHHHHHHSCSHHHH
T ss_pred CHHHHHHHHHHHHHHHCCCCCHHHHHcCCCHHHH
Confidence 9999999999999999999999999999999763
No 449
>2afd_A Protein ASL1650; twisted antiparallel helical bundle, acyl carrier protein FA structural genomics, PSI, protein structure initiative; NMR {Nostoc SP} PDB: 2afe_A
Probab=86.96 E-value=1.2 Score=35.26 Aligned_cols=42 Identities=7% Similarity=-0.024 Sum_probs=35.1
Q ss_pred CCchhhhh-hhhHHHHHHHHHHhhcCCCCccccccCCCCchhh
Q psy6053 47 SLPLEFIR-CEVIVSELVMAANKVNNMNVPYETFYKPPVLSEE 88 (614)
Q Consensus 47 ~~~~~~~~-~s~~~~~l~~~l~~~~~~~~~~~~~~~~~tl~~~ 88 (614)
..++.... +|+.++++...+++.+|++++...++++||+..-
T Consensus 37 ~~~~~~lG~DSl~~~~l~~~l~~~~~~~i~~~~~~~~~ti~~l 79 (88)
T 2afd_A 37 EESFDNYDLNSSKALILLGRLEKWLGKELNPVLIFNYPTIAQL 79 (88)
T ss_dssp TSCGGGTTCCSTHHHHHHHHHHHHTTSCCCGGGTTTCCSHHHH
T ss_pred CCCHHHcCccHHHHHHHHHHHHHHHCCCcCHHHHHhCCCHHHH
Confidence 33443333 9999999999999999999999999999999753
No 450
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=86.91 E-value=2 Score=43.46 Aligned_cols=112 Identities=17% Similarity=0.077 Sum_probs=66.0
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCCCC
Q psy6053 103 KTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAEAD 182 (614)
Q Consensus 103 ~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~~~ 182 (614)
|+|.|.|| |.+|..++..|++.|+ ...|.+.+|.+ ++++.... .+.+..+ ......+...| .
T Consensus 1 mkI~VIGa-G~~G~~la~~l~~~g~-~~~V~l~D~~~------~~~~~~~~-----~l~~~~~--~~~~~~i~~~d---~ 62 (319)
T 1a5z_A 1 MKIGIVGL-GRVGSSTAFALLMKGF-AREMVLIDVDK------KRAEGDAL-----DLIHGTP--FTRRANIYAGD---Y 62 (319)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECSSH------HHHHHHHH-----HHHHHGG--GSCCCEEEECC---G
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC-CCeEEEEeCCh------HHHHHHHH-----HHHhhhh--hcCCcEEEeCC---H
Confidence 57999998 9999999999999987 34588888863 22222110 0000000 00111222222 1
Q ss_pred CCCCCHHHHHHHhccccEEEEcccccChh-HHHHHHHHHhHHHHHHHHHHHHHcCCCceEEE
Q psy6053 183 ELAIKESDRQLLASEVDIMIHGAATIRFD-EALKKAVLLNTRGTKMMLSLAKEMKHLELFVH 243 (614)
Q Consensus 183 ~lGLs~~~~~~l~~~vd~ViH~AA~v~~~-~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~ 243 (614)
+.++++|+||-+++..... ....+....|+.-.+.+++...+. .....+.
T Consensus 63 ----------~~~~~aDvViiav~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~~~~~ii 113 (319)
T 1a5z_A 63 ----------ADLKGSDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKY-APDSIVI 113 (319)
T ss_dssp ----------GGGTTCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEE
T ss_pred ----------HHhCCCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhh-CCCeEEE
Confidence 1357899999998864421 123356677888888888888774 3344433
No 451
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=86.83 E-value=1.1 Score=45.18 Aligned_cols=37 Identities=14% Similarity=0.291 Sum_probs=30.3
Q ss_pred Cc-EEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCC
Q psy6053 102 GK-TLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKG 141 (614)
Q Consensus 102 ~~-~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~ 141 (614)
+. +|||+||+|-+|...+..+...|.+ |++.+++...
T Consensus 149 g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~---vi~~~~~~~~ 186 (328)
T 1xa0_A 149 ERGPVLVTGATGGVGSLAVSMLAKRGYT---VEASTGKAAE 186 (328)
T ss_dssp GGCCEEESSTTSHHHHHHHHHHHHTTCC---EEEEESCTTC
T ss_pred CCceEEEecCCCHHHHHHHHHHHHCCCE---EEEEECCHHH
Confidence 44 7999999999999999888777754 8888887543
No 452
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=86.79 E-value=0.96 Score=43.99 Aligned_cols=33 Identities=12% Similarity=0.253 Sum_probs=24.8
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEEc
Q psy6053 103 KTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMR 137 (614)
Q Consensus 103 ~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR 137 (614)
++|.|.|++|-+|+.+++.+.+. ++. ++.+.+.
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~-~~~-elva~~d 33 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAA-DDL-TLSAELD 33 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHC-TTC-EEEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHhC-CCC-EEEEEEc
Confidence 47999999999999999998765 332 3554444
No 453
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=86.76 E-value=0.32 Score=49.59 Aligned_cols=71 Identities=10% Similarity=0.062 Sum_probs=50.7
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCCC
Q psy6053 102 GKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAEA 181 (614)
Q Consensus 102 ~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~~ 181 (614)
.++|+|.|+ |-+|+.+++.|.+.|+ |.++.+++ ++++ + ...++.++.||.++
T Consensus 115 ~~~viI~G~-G~~g~~l~~~L~~~g~----v~vid~~~------~~~~-~----------------~~~~~~~i~gd~~~ 166 (336)
T 1lnq_A 115 SRHVVICGW-SESTLECLRELRGSEV----FVLAEDEN------VRKK-V----------------LRSGANFVHGDPTR 166 (336)
T ss_dssp -CEEEEESC-CHHHHHHHTTGGGSCE----EEEESCGG------GHHH-H----------------HHTTCEEEESCTTS
T ss_pred cCCEEEECC-cHHHHHHHHHHHhCCc----EEEEeCCh------hhhh-H----------------HhCCcEEEEeCCCC
Confidence 468999996 9999999999988753 55555543 2222 2 11357899999998
Q ss_pred CCCCCCHHHHHHH-hccccEEEEccc
Q psy6053 182 DELAIKESDRQLL-ASEVDIMIHGAA 206 (614)
Q Consensus 182 ~~lGLs~~~~~~l-~~~vd~ViH~AA 206 (614)
++ .++++ ++++|.|+-+.+
T Consensus 167 ~~------~L~~a~i~~a~~vi~~~~ 186 (336)
T 1lnq_A 167 VS------DLEKANVRGARAVIVDLE 186 (336)
T ss_dssp HH------HHHHTCSTTEEEEEECCS
T ss_pred HH------HHHhcChhhccEEEEcCC
Confidence 66 67766 678999986643
No 454
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=86.65 E-value=0.95 Score=44.63 Aligned_cols=35 Identities=14% Similarity=0.260 Sum_probs=29.9
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEc
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMR 137 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR 137 (614)
.+|++++|.|++|-+|+.++..|++.|.. |+...|
T Consensus 148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAt---Vtv~~~ 182 (276)
T 3ngx_A 148 YHENTVTIVNRSPVVGRPLSMMLLNRNYT---VSVCHS 182 (276)
T ss_dssp CCSCEEEEECCCTTTHHHHHHHHHHTTCE---EEEECT
T ss_pred cCCCEEEEEcCChHHHHHHHHHHHHCCCe---EEEEeC
Confidence 68999999999999999999999999765 555443
No 455
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=86.55 E-value=0.49 Score=49.25 Aligned_cols=76 Identities=12% Similarity=0.113 Sum_probs=49.8
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
..+++|+|+|+ |-+|..+++.+...|. +|++..|.. +|++.+.+ . ....+.. +.
T Consensus 166 l~g~~V~ViG~-G~iG~~~a~~a~~~Ga---~V~~~d~~~------~~l~~~~~---------~----~g~~~~~---~~ 219 (377)
T 2vhw_A 166 VEPADVVVIGA-GTAGYNAARIANGMGA---TVTVLDINI------DKLRQLDA---------E----FCGRIHT---RY 219 (377)
T ss_dssp BCCCEEEEECC-SHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHHHH---------H----TTTSSEE---EE
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCC---EEEEEeCCH------HHHHHHHH---------h----cCCeeEe---cc
Confidence 56899999998 9999999999998875 488888863 23322210 0 0011111 11
Q ss_pred CCCCCCCCHHHHHHHhccccEEEEcccc
Q psy6053 180 EADELAIKESDRQLLASEVDIMIHGAAT 207 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~~vd~ViH~AA~ 207 (614)
.+ .+++.+++.++|+||.+++.
T Consensus 220 ~~------~~~l~~~l~~aDvVi~~~~~ 241 (377)
T 2vhw_A 220 SS------AYELEGAVKRADLVIGAVLV 241 (377)
T ss_dssp CC------HHHHHHHHHHCSEEEECCCC
T ss_pred CC------HHHHHHHHcCCCEEEECCCc
Confidence 11 23577778899999998764
No 456
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=86.40 E-value=2.6 Score=42.00 Aligned_cols=35 Identities=11% Similarity=0.192 Sum_probs=27.8
Q ss_pred CCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEc
Q psy6053 101 TGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMR 137 (614)
Q Consensus 101 ~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR 137 (614)
+.++|.|.|+||-+|+.+++.+++.|++ .|+.+.+
T Consensus 6 ~~~~VaVvGasG~~G~~~~~~l~~~g~~--~v~~VnP 40 (288)
T 1oi7_A 6 RETRVLVQGITGREGQFHTKQMLTYGTK--IVAGVTP 40 (288)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCE--EEEEECT
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHcCCe--EEEEECC
Confidence 3578999999999999999999998765 2444444
No 457
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=86.04 E-value=0.83 Score=48.49 Aligned_cols=38 Identities=18% Similarity=0.216 Sum_probs=30.7
Q ss_pred cccCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEcc
Q psy6053 98 ETFTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQ 138 (614)
Q Consensus 98 ~~~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~ 138 (614)
..-.|++|+|+||+|-+|...+..+...|.+ |++.+++
T Consensus 217 ~~~~g~~VlV~GasG~iG~~a~qla~~~Ga~---vi~~~~~ 254 (447)
T 4a0s_A 217 QMKQGDIVLIWGASGGLGSYAIQFVKNGGGI---PVAVVSS 254 (447)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTTCE---EEEEESS
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHcCCE---EEEEeCC
Confidence 3446899999999999999998888777754 7777764
No 458
>2kr5_A PKS, aflatoxin biosynthesis polyketide synthase; acyl carrrier protein, holo, phosphopantetheine, transport protein; HET: PNS; NMR {Aspergillus parasiticus}
Probab=85.95 E-value=1.4 Score=34.97 Aligned_cols=44 Identities=2% Similarity=-0.152 Sum_probs=35.7
Q ss_pred cCCCchhhhh-hhhHHHHHHHHHHhhcCCCCcc--ccccCCCCchhh
Q psy6053 45 DFSLPLEFIR-CEVIVSELVMAANKVNNMNVPY--ETFYKPPVLSEE 88 (614)
Q Consensus 45 ~~~~~~~~~~-~s~~~~~l~~~l~~~~~~~~~~--~~~~~~~tl~~~ 88 (614)
+...++.... +|+.++++...+++.+|++++. ..++++||+.+-
T Consensus 32 ~~~~~~~~lG~DSL~~~~l~~~l~~~~g~~l~~~~~~l~~~~Tv~~l 78 (89)
T 2kr5_A 32 TDDSNFADMGIDSLSSMVIGSRFREDLGLDLGPEFSLFIDCTTVRAL 78 (89)
T ss_dssp CTTCBHHHHTCCHHHHHHHHHHHHHTTCCCCCSSCCTTTSCCBHHHH
T ss_pred CCCCCHHHcCccHHHHHHHHHHHHHHHCCCCCchHHHHHcCCCHHHH
Confidence 3344443333 9999999999999999999999 999999999763
No 459
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=85.77 E-value=0.72 Score=47.60 Aligned_cols=76 Identities=20% Similarity=0.201 Sum_probs=48.4
Q ss_pred CCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCC
Q psy6053 101 TGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAE 180 (614)
Q Consensus 101 ~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~ 180 (614)
.|++|||+|+ |-+|...++.+...|. +|++..|+... ++...+ +. ..+ .++ |..
T Consensus 187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga---~Vi~~~~~~~~------~~~~~~---------~l---Ga~--~v~--~~~ 240 (366)
T 1yqd_A 187 PGKHIGIVGL-GGLGHVAVKFAKAFGS---KVTVISTSPSK------KEEALK---------NF---GAD--SFL--VSR 240 (366)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTC---EEEEEESCGGG------HHHHHH---------TS---CCS--EEE--ETT
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCC---EEEEEeCCHHH------HHHHHH---------hc---CCc--eEE--ecc
Confidence 5789999996 9999999988877774 48888876432 211110 00 111 122 333
Q ss_pred CCCCCCCHHHHHHHhccccEEEEccccc
Q psy6053 181 ADELAIKESDRQLLASEVDIMIHGAATI 208 (614)
Q Consensus 181 ~~~lGLs~~~~~~l~~~vd~ViH~AA~v 208 (614)
+ .+.+.++..++|+||++++..
T Consensus 241 ~------~~~~~~~~~~~D~vid~~g~~ 262 (366)
T 1yqd_A 241 D------QEQMQAAAGTLDGIIDTVSAV 262 (366)
T ss_dssp C------HHHHHHTTTCEEEEEECCSSC
T ss_pred C------HHHHHHhhCCCCEEEECCCcH
Confidence 3 235666667899999998854
No 460
>2ju1_A Erythronolide synthase; carrier protein domain, modular polyketide synthase, alpha- helical bundle, acyltransferase; NMR {Saccharopolyspora erythraea} PDB: 2ju2_A
Probab=85.70 E-value=0.94 Score=36.59 Aligned_cols=43 Identities=14% Similarity=0.202 Sum_probs=35.5
Q ss_pred cCCCchhhhh-hhhHHHHHHHHHHhhcCCCCccccccCCCCchh
Q psy6053 45 DFSLPLEFIR-CEVIVSELVMAANKVNNMNVPYETFYKPPVLSE 87 (614)
Q Consensus 45 ~~~~~~~~~~-~s~~~~~l~~~l~~~~~~~~~~~~~~~~~tl~~ 87 (614)
+...++.... +|+.+++|...+++.+|+++|...++++||+.+
T Consensus 42 ~~~~~f~~lG~DSL~a~~l~~~l~~~~g~~l~~~~l~~~~ti~~ 85 (95)
T 2ju1_A 42 RATTPFKELGFDSLAAVRLRNLLNAATGLRLPSTLVFDHPNASA 85 (95)
T ss_dssp CSSSCHHHHTCSSHHHHHHHHHHGGGTSSCCCTTHHHHCSSHHH
T ss_pred CCCCCHHHcCCcHHHHHHHHHHHHHHHCCCCChhHHhcCCCHHH
Confidence 3344443333 999999999999999999999999999999875
No 461
>2ju1_A Erythronolide synthase; carrier protein domain, modular polyketide synthase, alpha- helical bundle, acyltransferase; NMR {Saccharopolyspora erythraea} PDB: 2ju2_A
Probab=85.13 E-value=0.26 Score=40.08 Aligned_cols=48 Identities=10% Similarity=-0.014 Sum_probs=37.7
Q ss_pred cccchHHHHHHHhhcccccc------ccCCCchhhhhhhhHHHHHHHHHHhhcC
Q psy6053 24 DFAIMFADLAIMFADLPIMF------ADFSLPLEFIRCEVIVSELVMAANKVNN 71 (614)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~s~~~~~l~~~l~~~~~ 71 (614)
+.+.+|+++|+||+...++. .++.+|...+++..|+..|+..+.+..|
T Consensus 42 ~~~~~f~~lG~DSL~a~~l~~~l~~~~g~~l~~~~l~~~~ti~~la~~l~~~lg 95 (95)
T 2ju1_A 42 RATTPFKELGFDSLAAVRLRNLLNAATGLRLPSTLVFDHPNASAVAGFLDAELG 95 (95)
T ss_dssp CSSSCHHHHTCSSHHHHHHHHHHGGGTSSCCCTTHHHHCSSHHHHHHHHHHHHC
T ss_pred CCCCCHHHcCCcHHHHHHHHHHHHHHHCCCCChhHHhcCCCHHHHHHHHHHHcC
Confidence 45668999999999777665 3556777778888999999998877643
No 462
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=84.84 E-value=1.7 Score=44.43 Aligned_cols=36 Identities=25% Similarity=0.329 Sum_probs=27.6
Q ss_pred CcEEEEecccccccHHH-HHHH-HhhCCCccEEEEEEccCC
Q psy6053 102 GKTLFMTGASGFLGKVL-LEKI-LRKSPNVKKIYILMRQKK 140 (614)
Q Consensus 102 ~~~VLITGaTGFlG~~L-l~~L-l~~g~~v~~V~~LvR~~~ 140 (614)
+.+|||+|| |-+|... +.-+ ...|. ++|++.++++.
T Consensus 173 ~~~VlV~Ga-G~vG~~a~iqla~k~~Ga--~~Vi~~~~~~~ 210 (357)
T 2b5w_A 173 PSSAFVLGN-GSLGLLTLAMLKVDDKGY--ENLYCLGRRDR 210 (357)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHCTTCC--CEEEEEECCCS
T ss_pred CCEEEEECC-CHHHHHHHHHHHHHHcCC--cEEEEEeCCcc
Confidence 389999999 9999988 7655 45553 35899988754
No 463
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=84.75 E-value=3.3 Score=41.19 Aligned_cols=36 Identities=11% Similarity=0.110 Sum_probs=28.0
Q ss_pred CCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccC
Q psy6053 101 TGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQK 139 (614)
Q Consensus 101 ~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~ 139 (614)
+..+|.|.|+||.+|+.+++.+++.|.+ +++.+.++
T Consensus 6 ~~~rVaViG~sG~~G~~~~~~l~~~g~~---~V~~V~p~ 41 (288)
T 2nu8_A 6 KNTKVICQGFTGSQGTFHSEQAIAYGTK---MVGGVTPG 41 (288)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCE---EEEEECTT
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCe---EEEEeCCC
Confidence 3578999999999999999999988654 44444443
No 464
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=84.69 E-value=1.8 Score=46.04 Aligned_cols=37 Identities=24% Similarity=0.268 Sum_probs=30.0
Q ss_pred ccCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEcc
Q psy6053 99 TFTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQ 138 (614)
Q Consensus 99 ~~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~ 138 (614)
.-.|.+|+|+||+|-+|...+..+...|.+ |++++++
T Consensus 226 ~~~g~~VlV~GasG~vG~~avqlak~~Ga~---vi~~~~~ 262 (456)
T 3krt_A 226 MKQGDNVLIWGASGGLGSYATQFALAGGAN---PICVVSS 262 (456)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCE---EEEEESS
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCCe---EEEEECC
Confidence 345889999999999999998888777754 7777764
No 465
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=84.58 E-value=3.7 Score=41.34 Aligned_cols=35 Identities=11% Similarity=0.269 Sum_probs=29.7
Q ss_pred CCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccC
Q psy6053 101 TGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQK 139 (614)
Q Consensus 101 ~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~ 139 (614)
+.|+|.|.| +|.+|..++..|++.|++ |++..|..
T Consensus 30 ~~~~I~iIG-~G~mG~~~a~~l~~~G~~---V~~~dr~~ 64 (320)
T 4dll_A 30 YARKITFLG-TGSMGLPMARRLCEAGYA---LQVWNRTP 64 (320)
T ss_dssp CCSEEEEEC-CTTTHHHHHHHHHHTTCE---EEEECSCH
T ss_pred CCCEEEEEC-ccHHHHHHHHHHHhCCCe---EEEEcCCH
Confidence 457899997 699999999999999876 77887763
No 466
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=84.45 E-value=0.86 Score=44.28 Aligned_cols=35 Identities=9% Similarity=0.166 Sum_probs=26.5
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccC
Q psy6053 102 GKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQK 139 (614)
Q Consensus 102 ~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~ 139 (614)
.++|.|.|+ |.+|+.+++.+.+.+.+ -|-++.|..
T Consensus 3 MmkI~ViGa-GrMG~~i~~~l~~~~~e--Lva~~d~~~ 37 (243)
T 3qy9_A 3 SMKILLIGY-GAMNQRVARLAEEKGHE--IVGVIENTP 37 (243)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCE--EEEEECSSC
T ss_pred ceEEEEECc-CHHHHHHHHHHHhCCCE--EEEEEecCc
Confidence 478999999 99999999999887432 233455654
No 467
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=84.42 E-value=2 Score=41.91 Aligned_cols=36 Identities=19% Similarity=0.368 Sum_probs=30.3
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQK 139 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~ 139 (614)
.++ +|+|.|+ |-+|+.++..|++.|. .+|++..|..
T Consensus 107 ~~~-~vliiGa-Gg~a~ai~~~L~~~G~--~~I~v~nR~~ 142 (253)
T 3u62_A 107 VKE-PVVVVGA-GGAARAVIYALLQMGV--KDIWVVNRTI 142 (253)
T ss_dssp CCS-SEEEECC-SHHHHHHHHHHHHTTC--CCEEEEESCH
T ss_pred CCC-eEEEECc-HHHHHHHHHHHHHcCC--CEEEEEeCCH
Confidence 357 8999996 8899999999999986 3589999963
No 468
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=84.19 E-value=2.4 Score=42.48 Aligned_cols=113 Identities=14% Similarity=0.134 Sum_probs=65.3
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHH-HHhChhhHHhhhhccccccCeEEEEeCCCC
Q psy6053 102 GKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEE-LFASPLFNLLKSVHGQKIIDKVLPISGDAE 180 (614)
Q Consensus 102 ~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~-~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~ 180 (614)
.|+|.|.|| |.+|..++..|.+.|+ +.+|.+++|+. ++++. ..+ +.+..+ ......+...+
T Consensus 7 ~mkI~IiGa-G~vG~~~a~~l~~~g~-~~~V~l~d~~~------~~~~~~~~~------~~~~~~--~~~~~~v~~~~-- 68 (319)
T 1lld_A 7 PTKLAVIGA-GAVGSTLAFAAAQRGI-AREIVLEDIAK------ERVEAEVLD------MQHGSS--FYPTVSIDGSD-- 68 (319)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTC-CSEEEEECSSH------HHHHHHHHH------HHHTGG--GSTTCEEEEES--
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCC-CCEEEEEeCCh------hHHHHHHHH------HHhhhh--hcCCeEEEeCC--
Confidence 478999997 9999999999999886 23588888863 22221 000 000000 10111221110
Q ss_pred CCCCCCCHHHHHHHhccccEEEEcccccCh-hHHHHHHHHHhHHHHHHHHHHHHHcCCCceEEE
Q psy6053 181 ADELAIKESDRQLLASEVDIMIHGAATIRF-DEALKKAVLLNTRGTKMMLSLAKEMKHLELFVH 243 (614)
Q Consensus 181 ~~~lGLs~~~~~~l~~~vd~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~ 243 (614)
+ . ..++++|+||-+++.... .....+....|+...+.+++...+. .....|.
T Consensus 69 ~---------~-~~~~~aD~Vii~v~~~~~~g~~r~~~~~~n~~~~~~~~~~i~~~-~~~~~vi 121 (319)
T 1lld_A 69 D---------P-EICRDADMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKV-APNAIYM 121 (319)
T ss_dssp C---------G-GGGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTSEEE
T ss_pred C---------H-HHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCceEE
Confidence 1 1 134689999999865432 2333456777888888888777764 3344443
No 469
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=83.93 E-value=1.7 Score=43.36 Aligned_cols=34 Identities=24% Similarity=0.300 Sum_probs=29.4
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEEcc
Q psy6053 102 GKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQ 138 (614)
Q Consensus 102 ~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~ 138 (614)
.++|.|.||+|-+|..++..|.+.|++ |++..|+
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~~~G~~---V~~~~~~ 54 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLRASGYP---ISILDRE 54 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTTTCC---EEEECTT
T ss_pred CCEEEEEcCCCHHHHHHHHHHHhCCCe---EEEEECC
Confidence 358999999999999999999999887 7777664
No 470
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=83.68 E-value=2.5 Score=42.85 Aligned_cols=111 Identities=15% Similarity=0.154 Sum_probs=64.1
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCH-HHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCCC
Q psy6053 103 KTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNA-RQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAEA 181 (614)
Q Consensus 103 ~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~-~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~~ 181 (614)
++|.|.|| |.+|..++..|...|. + .|.+.++....... ...+.+... ..+ ...++... .|
T Consensus 15 ~kI~ViGa-G~vG~~iA~~la~~g~-~-~V~L~Di~~~~l~~~~~~l~~~~~---------~~~--~~~~i~~t-~d--- 76 (328)
T 2hjr_A 15 KKISIIGA-GQIGSTIALLLGQKDL-G-DVYMFDIIEGVPQGKALDLNHCMA---------LIG--SPAKIFGE-NN--- 76 (328)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTC-C-EEEEECSSTTHHHHHHHHHHHHHH---------HHT--CCCCEEEE-SC---
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC-C-eEEEEECCHHHHHHHHHHHHhHhh---------ccC--CCCEEEEC-CC---
Confidence 68999998 9999999999988876 1 38888886532111 011111110 000 11234332 33
Q ss_pred CCCCCCHHHHHHHhccccEEEEcccccC-hhHHHHHHHHHhHHHHHHHHHHHHHcCCCceEE
Q psy6053 182 DELAIKESDRQLLASEVDIMIHGAATIR-FDEALKKAVLLNTRGTKMMLSLAKEMKHLELFV 242 (614)
Q Consensus 182 ~~lGLs~~~~~~l~~~vd~ViH~AA~v~-~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V 242 (614)
+ +.++++|+||-+++... ......+....|+.-.+.+.+...+. ....++
T Consensus 77 ---------~-~al~~aD~VI~avg~p~k~g~tr~dl~~~n~~i~~~i~~~i~~~-~p~a~v 127 (328)
T 2hjr_A 77 ---------Y-EYLQNSDVVIITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKY-CPNAFV 127 (328)
T ss_dssp ---------G-GGGTTCSEEEECCSCCCCTTCCSGGGHHHHHHHHHHHHHHHHHH-CTTCEE
T ss_pred ---------H-HHHCCCCEEEEcCCCCCCCCCchhhHHhhhHHHHHHHHHHHHHH-CCCeEE
Confidence 2 34678999999986542 11111234466777777787777664 234443
No 471
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=83.49 E-value=2.6 Score=42.36 Aligned_cols=111 Identities=13% Similarity=0.077 Sum_probs=66.3
Q ss_pred EEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCCCCC
Q psy6053 104 TLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAEADE 183 (614)
Q Consensus 104 ~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~~~~ 183 (614)
+|.|+|| |.+|..++..|+..+. ..|.++++..... +....++.+...+ .. ...++..- +|
T Consensus 1 KI~IiGa-G~vG~~~a~~l~~~~l--~el~L~Di~~~~~--~g~~~dl~~~~~~------~~--~~~~i~~t-~d----- 61 (308)
T 2d4a_B 1 MITILGA-GKVGMATAVMLMMRGY--DDLLLIARTPGKP--QGEALDLAHAAAE------LG--VDIRISGS-NS----- 61 (308)
T ss_dssp CEEEECC-SHHHHHHHHHHHHHTC--SCEEEECSSTTHH--HHHHHHHHHHHHH------HT--CCCCEEEE-SC-----
T ss_pred CEEEECc-CHHHHHHHHHHHhCCC--CEEEEEcCChhhH--HHHHHHHHHhhhh------cC--CCeEEEEC-CC-----
Confidence 4889998 9999999999988765 4588888864321 1111121110000 00 11223321 33
Q ss_pred CCCCHHHHHHHhccccEEEEcccccC-hhHHHHHHHHHhHHHHHHHHHHHHHcCCCceEE
Q psy6053 184 LAIKESDRQLLASEVDIMIHGAATIR-FDEALKKAVLLNTRGTKMMLSLAKEMKHLELFV 242 (614)
Q Consensus 184 lGLs~~~~~~l~~~vd~ViH~AA~v~-~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~V 242 (614)
+ +.++++|+||-+|+... ......+....|+.-.+.+.+.+.+. .....+
T Consensus 62 -------~-~a~~~aD~Vi~~ag~~~k~G~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~i 112 (308)
T 2d4a_B 62 -------Y-EDMRGSDIVLVTAGIGRKPGMTREQLLEANANTMADLAEKIKAY-AKDAIV 112 (308)
T ss_dssp -------G-GGGTTCSEEEECCSCCCCSSCCTHHHHHHHHHHHHHHHHHHHHH-CTTCEE
T ss_pred -------H-HHhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHH-CCCeEE
Confidence 2 24679999999988653 22233456788888889999888874 344333
No 472
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=83.36 E-value=1.3 Score=46.79 Aligned_cols=74 Identities=15% Similarity=0.173 Sum_probs=50.8
Q ss_pred ccccccCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEE
Q psy6053 95 RIGETFTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLP 174 (614)
Q Consensus 95 ~i~~~~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~ 174 (614)
.....+.+++|+|.| .|.+|+.+++.+.+.|.+ |+++...+.. +..+ ..+ ..
T Consensus 28 ~~~~~~~~~~IlIlG-~G~lg~~~~~aa~~lG~~---v~v~d~~~~~--p~~~--------------------~ad--~~ 79 (419)
T 4e4t_A 28 SVSPILPGAWLGMVG-GGQLGRMFCFAAQSMGYR---VAVLDPDPAS--PAGA--------------------VAD--RH 79 (419)
T ss_dssp -CCCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCE---EEEECSCTTC--HHHH--------------------HSS--EE
T ss_pred ccccCCCCCEEEEEC-CCHHHHHHHHHHHHCCCE---EEEECCCCcC--chhh--------------------hCC--EE
Confidence 333456789999998 488999999999999876 6677654332 2211 112 24
Q ss_pred EeCCCCCCCCCCCHHHHHHHhccccEEE
Q psy6053 175 ISGDAEADELAIKESDRQLLASEVDIMI 202 (614)
Q Consensus 175 v~gDl~~~~lGLs~~~~~~l~~~vd~Vi 202 (614)
+.+|..+++ .+.++++++|+|+
T Consensus 80 ~~~~~~d~~------~l~~~a~~~D~V~ 101 (419)
T 4e4t_A 80 LRAAYDDEA------ALAELAGLCEAVS 101 (419)
T ss_dssp ECCCTTCHH------HHHHHHHHCSEEE
T ss_pred EECCcCCHH------HHHHHHhcCCEEE
Confidence 457776654 7778888899988
No 473
>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*
Probab=83.34 E-value=0.97 Score=46.63 Aligned_cols=39 Identities=23% Similarity=0.349 Sum_probs=28.0
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEE-ccCCCc
Q psy6053 102 GKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILM-RQKKGK 142 (614)
Q Consensus 102 ~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~Lv-R~~~~~ 142 (614)
..+|.|.||||++|..|++.|.+. |.+ ++..+. |+..++
T Consensus 7 ~~kVaIvGATGyvG~eLlrlL~~h-P~~-el~~l~S~~saGk 46 (359)
T 4dpk_A 7 TLKAAILGATGLVGIEYVRMLSNH-PYI-KPAYLAGKGSVGK 46 (359)
T ss_dssp CEEEEETTTTSTTHHHHHHHHTTC-SSE-EEEEEEESTTTTS
T ss_pred CCeEEEECCCCHHHHHHHHHHHhC-CCc-eEEEEECchhcCC
Confidence 468999999999999999966554 765 455554 434443
No 474
>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*
Probab=83.34 E-value=0.97 Score=46.63 Aligned_cols=39 Identities=23% Similarity=0.349 Sum_probs=28.0
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEE-ccCCCc
Q psy6053 102 GKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILM-RQKKGK 142 (614)
Q Consensus 102 ~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~Lv-R~~~~~ 142 (614)
..+|.|.||||++|..|++.|.+. |.+ ++..+. |+..++
T Consensus 7 ~~kVaIvGATGyvG~eLlrlL~~h-P~~-el~~l~S~~saGk 46 (359)
T 4dpl_A 7 TLKAAILGATGLVGIEYVRMLSNH-PYI-KPAYLAGKGSVGK 46 (359)
T ss_dssp CEEEEETTTTSTTHHHHHHHHTTC-SSE-EEEEEEESTTTTS
T ss_pred CCeEEEECCCCHHHHHHHHHHHhC-CCc-eEEEEECchhcCC
Confidence 468999999999999999966554 765 455554 434443
No 475
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=83.24 E-value=5.7 Score=39.77 Aligned_cols=25 Identities=20% Similarity=0.324 Sum_probs=21.9
Q ss_pred CcEEEEecccccccHHHHHHHHhhC
Q psy6053 102 GKTLFMTGASGFLGKVLLEKILRKS 126 (614)
Q Consensus 102 ~~~VLITGaTGFlG~~Ll~~Ll~~g 126 (614)
+++|.|.|+.|++|...+..|.+.+
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~~ 27 (312)
T 3o9z_A 3 MTRFALTGLAGYIAPRHLKAIKEVG 27 (312)
T ss_dssp CCEEEEECTTSSSHHHHHHHHHHTT
T ss_pred ceEEEEECCChHHHHHHHHHHHhCC
Confidence 4689999998999999999998874
No 476
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=83.13 E-value=2.1 Score=44.83 Aligned_cols=37 Identities=22% Similarity=0.473 Sum_probs=31.7
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQK 139 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~ 139 (614)
..|++|+|.|+ |-+|..++..|...|. .+|++..|..
T Consensus 165 l~g~~VlIiGa-G~iG~~~a~~l~~~G~--~~V~v~~r~~ 201 (404)
T 1gpj_A 165 LHDKTVLVVGA-GEMGKTVAKSLVDRGV--RAVLVANRTY 201 (404)
T ss_dssp CTTCEEEEESC-CHHHHHHHHHHHHHCC--SEEEEECSSH
T ss_pred ccCCEEEEECh-HHHHHHHHHHHHHCCC--CEEEEEeCCH
Confidence 46899999997 9999999999999875 3688888863
No 477
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=82.96 E-value=2.5 Score=42.53 Aligned_cols=106 Identities=14% Similarity=0.088 Sum_probs=60.7
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHH-HHHhChhhHHhhhhccccccCeEEEEeCCCC
Q psy6053 102 GKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIE-ELFASPLFNLLKSVHGQKIIDKVLPISGDAE 180 (614)
Q Consensus 102 ~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~-~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~ 180 (614)
.++|.|.|| |.+|..++..|++.|.. .|.+.+|.... .+... ++.... . .. . ...++... .|
T Consensus 4 ~~kI~VIGa-G~~G~~ia~~la~~g~~--~V~l~D~~~~~---~~~~~~~l~~~~-----~-~~-~-~~~~i~~t-~d-- 66 (317)
T 2ewd_A 4 RRKIAVIGS-GQIGGNIAYIVGKDNLA--DVVLFDIAEGI---PQGKALDITHSM-----V-MF-G-STSKVIGT-DD-- 66 (317)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTCC--EEEEECSSSSH---HHHHHHHHHHHH-----H-HH-T-CCCCEEEE-SC--
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCc--eEEEEeCCchH---HHHHHHHHHhhh-----h-hc-C-CCcEEEEC-CC--
Confidence 468999997 99999999999999861 38888886532 12211 110000 0 00 0 11233321 22
Q ss_pred CCCCCCCHHHHHHHhccccEEEEcccccCh-hHHHHHHHHHhHHHHHHHHHHHHHc
Q psy6053 181 ADELAIKESDRQLLASEVDIMIHGAATIRF-DEALKKAVLLNTRGTKMMLSLAKEM 235 (614)
Q Consensus 181 ~~~lGLs~~~~~~l~~~vd~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~la~~~ 235 (614)
+ +.++++|+||-+++...- .....+...-|....+.+++...+.
T Consensus 67 ----------~-~a~~~aDiVi~avg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~~ 111 (317)
T 2ewd_A 67 ----------Y-ADISGSDVVIITASIPGRPKDDRSELLFGNARILDSVAEGVKKY 111 (317)
T ss_dssp ----------G-GGGTTCSEEEECCCCSSCCSSCGGGGHHHHHHHHHHHHHHHHHH
T ss_pred ----------H-HHhCCCCEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHHHH
Confidence 2 245789999999865321 1111233455666667777777664
No 478
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=82.90 E-value=6.9 Score=41.45 Aligned_cols=86 Identities=17% Similarity=0.183 Sum_probs=55.4
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcC-HHHHHHHHHhChhhHHhhhhccccccCeEEEEeCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKN-ARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGD 178 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~-~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gD 178 (614)
+++|+|+|.|. |-.|..+++.|.++|++ |.+.++...... ..++|++ .++.+..|.
T Consensus 7 ~~~k~v~viG~-G~sG~s~A~~l~~~G~~---V~~~D~~~~~~~~~~~~L~~-------------------~gi~~~~g~ 63 (451)
T 3lk7_A 7 FENKKVLVLGL-ARSGEAAARLLAKLGAI---VTVNDGKPFDENPTAQSLLE-------------------EGIKVVCGS 63 (451)
T ss_dssp TTTCEEEEECC-TTTHHHHHHHHHHTTCE---EEEEESSCGGGCHHHHHHHH-------------------TTCEEEESC
T ss_pred cCCCEEEEEee-CHHHHHHHHHHHhCCCE---EEEEeCCcccCChHHHHHHh-------------------CCCEEEECC
Confidence 56899999998 77999999999999977 888877542211 1122221 356666665
Q ss_pred CCCCCCCCCHHHHHHHhcc-ccEEEEcccccChhHHHHHHHH
Q psy6053 179 AEADELAIKESDRQLLASE-VDIMIHGAATIRFDEALKKAVL 219 (614)
Q Consensus 179 l~~~~lGLs~~~~~~l~~~-vd~ViH~AA~v~~~~~~~~~~~ 219 (614)
-.+ .++++ +|.||.+.|....+..+..+.+
T Consensus 64 ~~~-----------~~~~~~~d~vv~spgi~~~~p~~~~a~~ 94 (451)
T 3lk7_A 64 HPL-----------ELLDEDFCYMIKNPGIPYNNPMVKKALE 94 (451)
T ss_dssp CCG-----------GGGGSCEEEEEECTTSCTTSHHHHHHHH
T ss_pred ChH-----------HhhcCCCCEEEECCcCCCCChhHHHHHH
Confidence 322 23345 8999999887554444444443
No 479
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=82.58 E-value=6.6 Score=39.62 Aligned_cols=114 Identities=14% Similarity=0.040 Sum_probs=65.1
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCCCC
Q psy6053 102 GKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDAEA 181 (614)
Q Consensus 102 ~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl~~ 181 (614)
.++|.|.|| |.+|..++..|+..|. + .|.+.++.... .+.....+...... .. ...++... .|
T Consensus 4 ~~kI~VIGa-G~vG~~ia~~la~~g~-~-~v~L~Di~~~~---l~~~~~~l~~~~~~-----~~--~~~~i~~t-~d--- 66 (322)
T 1t2d_A 4 KAKIVLVGS-GMIGGVMATLIVQKNL-G-DVVLFDIVKNM---PHGKALDTSHTNVM-----AY--SNCKVSGS-NT--- 66 (322)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTC-C-EEEEECSSSSH---HHHHHHHHHTHHHH-----HT--CCCCEEEE-CC---
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCC-C-eEEEEeCCHHH---HHHHHHHHHhhhhh-----cC--CCcEEEEC-CC---
Confidence 368999998 9999999999998876 2 37777776432 12211111111100 00 11233321 33
Q ss_pred CCCCCCHHHHHHHhccccEEEEcccccC-hhHH-----HHHHHHHhHHHHHHHHHHHHHcCCCceEEE
Q psy6053 182 DELAIKESDRQLLASEVDIMIHGAATIR-FDEA-----LKKAVLLNTRGTKMMLSLAKEMKHLELFVH 243 (614)
Q Consensus 182 ~~lGLs~~~~~~l~~~vd~ViH~AA~v~-~~~~-----~~~~~~~Nv~gt~~ll~la~~~~~~k~~V~ 243 (614)
+ +.++++|+||-+++... .... ..+....|+.-.+.+.+...+. ....++.
T Consensus 67 ---------~-~al~~aD~Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~ii 123 (322)
T 1t2d_A 67 ---------Y-DDLAGADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKN-CPNAFII 123 (322)
T ss_dssp ---------G-GGGTTCSEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHH-CTTSEEE
T ss_pred ---------H-HHhCCCCEEEEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHH-CCCeEEE
Confidence 3 34679999999997542 1111 1234566777777887777764 3344443
No 480
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=82.57 E-value=1.2 Score=47.07 Aligned_cols=92 Identities=16% Similarity=0.170 Sum_probs=54.7
Q ss_pred CCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHH--------HHHHhChhhHHhhhhccccccCeE
Q psy6053 101 TGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRI--------EELFASPLFNLLKSVHGQKIIDKV 172 (614)
Q Consensus 101 ~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl--------~~~~~~~~f~~l~~~~p~~~~~~v 172 (614)
++.+|+|.|+ |-+|+.+++.|.+.| |.+|.+++...=..+-..|- .+-.....-+++++..|. -++
T Consensus 39 ~~~~VlvvG~-GGlGs~va~~La~aG--vg~i~ivD~D~Ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~lnp~---v~v 112 (434)
T 1tt5_B 39 DTCKVLVIGA-GGLGCELLKNLALSG--FRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPN---CNV 112 (434)
T ss_dssp HTCCEEEECS-STHHHHHHHHHHHTT--CCCEEEEECCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHSTT---CCC
T ss_pred cCCEEEEECc-CHHHHHHHHHHHHcC--CCEEEEEcCCEechhccCCCcCCChhHcCcHHHHHHHHHHHhhCCC---CEE
Confidence 5678999996 669999999999998 56788886442111000000 000000011233333444 467
Q ss_pred EEEeCCCCCCCCCCCHHHHHHHhccccEEEEccc
Q psy6053 173 LPISGDAEADELAIKESDRQLLASEVDIMIHGAA 206 (614)
Q Consensus 173 ~~v~gDl~~~~lGLs~~~~~~l~~~vd~ViH~AA 206 (614)
+.+..++.+.+ ..+++++|+||.+.-
T Consensus 113 ~~~~~~i~~~~--------~~~~~~~DlVi~~~D 138 (434)
T 1tt5_B 113 VPHFNKIQDFN--------DTFYRQFHIIVCGLD 138 (434)
T ss_dssp EEEESCGGGBC--------HHHHTTCSEEEECCS
T ss_pred EEEecccchhh--------HHHhcCCCEEEECCC
Confidence 78888776532 356789999998743
No 481
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=82.12 E-value=1.6 Score=45.00 Aligned_cols=36 Identities=17% Similarity=0.240 Sum_probs=28.4
Q ss_pred CCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCC
Q psy6053 101 TGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKK 140 (614)
Q Consensus 101 ~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~ 140 (614)
.|.+|||+|| |-+|...++-+...|. +|++.++++.
T Consensus 194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga---~Vi~~~~~~~ 229 (369)
T 1uuf_A 194 PGKKVGVVGI-GGLGHMGIKLAHAMGA---HVVAFTTSEA 229 (369)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTC---EEEEEESSGG
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCC---EEEEEeCCHH
Confidence 5789999998 7799998887766664 3888887653
No 482
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=82.09 E-value=1.6 Score=44.61 Aligned_cols=38 Identities=16% Similarity=0.298 Sum_probs=30.0
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKG 141 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~ 141 (614)
-.|.+|||+|| |-+|...+.-+...|. +|++..+++..
T Consensus 175 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga---~Vi~~~~~~~~ 212 (348)
T 3two_A 175 TKGTKVGVAGF-GGLGSMAVKYAVAMGA---EVSVFARNEHK 212 (348)
T ss_dssp CTTCEEEEESC-SHHHHHHHHHHHHTTC---EEEEECSSSTT
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCCC---eEEEEeCCHHH
Confidence 45889999997 9999988877777764 48888887644
No 483
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=81.93 E-value=1.9 Score=44.28 Aligned_cols=36 Identities=11% Similarity=0.194 Sum_probs=29.0
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQK 139 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~ 139 (614)
-.|++|||+| +|-+|...+..+...|. +|++.++++
T Consensus 188 ~~g~~VlV~G-~G~vG~~a~qla~~~Ga---~Vi~~~~~~ 223 (363)
T 3uog_A 188 RAGDRVVVQG-TGGVALFGLQIAKATGA---EVIVTSSSR 223 (363)
T ss_dssp CTTCEEEEES-SBHHHHHHHHHHHHTTC---EEEEEESCH
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHHcCC---EEEEEecCc
Confidence 4578999999 89999998887777765 488888753
No 484
>4i4d_A Peptide synthetase NRPS type II-PCP; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MLY; 2.10A {Streptomyces verticillus}
Probab=81.71 E-value=0.24 Score=40.36 Aligned_cols=48 Identities=13% Similarity=-0.031 Sum_probs=39.2
Q ss_pred cccchHHHHHHHhhcccccc------ccCCCchhhhhhhhHHHHHHHHHHhhcC
Q psy6053 24 DFAIMFADLAIMFADLPIMF------ADFSLPLEFIRCEVIVSELVMAANKVNN 71 (614)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~s~~~~~l~~~l~~~~~ 71 (614)
+.+-+|+++|+||+.+..+. .++.++...+++.+|+.+|+..+.+..+
T Consensus 35 ~~~~~Ff~lGgdSL~a~~l~~~l~~~~g~~l~~~~l~~~pTi~~la~~l~~~~~ 88 (93)
T 4i4d_A 35 GPHEDFAALGGNSIHAIXITNRVEELVDAELSIRVLLETRTVAGMTDHVHATLT 88 (93)
T ss_dssp CTTCCTTTTTCCHHHHHHHHHHHHHHHTSCCCHHHHHHHCSHHHHHHHHHHHTC
T ss_pred CCCCCHHHcCCcHHHHHHHHHHHHHHhCCCCCHHHHHcCCCHHHHHHHHHHHcc
Confidence 45568999999999777665 3678888888889999999999987653
No 485
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=81.57 E-value=1.4 Score=45.08 Aligned_cols=35 Identities=23% Similarity=0.239 Sum_probs=27.6
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEcc
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQ 138 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~ 138 (614)
-.|++|||+|+ |-+|...+.-+...|.+ |++..++
T Consensus 167 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~---Vi~~~~~ 201 (352)
T 1e3j_A 167 QLGTTVLVIGA-GPIGLVSVLAAKAYGAF---VVCTARS 201 (352)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCE---EEEEESC
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCE---EEEEcCC
Confidence 35789999997 88999888877667643 8888775
No 486
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=81.55 E-value=2.3 Score=45.28 Aligned_cols=33 Identities=15% Similarity=0.264 Sum_probs=29.0
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEEccC
Q psy6053 103 KTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQK 139 (614)
Q Consensus 103 ~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~ 139 (614)
|+|.|.| +|.+|..++..|.+.|++ |++.+|.+
T Consensus 3 mkI~VIG-~G~vG~~lA~~La~~G~~---V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVG-IGYVGLVSATCFAELGAN---VRCIDTDR 35 (450)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTCE---EEEECSCH
T ss_pred CEEEEEC-cCHHHHHHHHHHHhcCCE---EEEEECCH
Confidence 6899998 699999999999999976 88888863
No 487
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=81.26 E-value=2.6 Score=42.05 Aligned_cols=34 Identities=15% Similarity=0.319 Sum_probs=28.6
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEE
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILM 136 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~Lv 136 (614)
..|++|+|.|+++-+|+.++..|++.|.. |++..
T Consensus 163 l~gk~vvVIG~s~iVG~p~A~lL~~~gAt---Vtv~h 196 (301)
T 1a4i_A 163 IAGRHAVVVGRSKIVGAPMHDLLLWNNAT---VTTCH 196 (301)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHHTTCE---EEEEC
T ss_pred CCCCEEEEECCCchHHHHHHHHHHhCCCe---EEEEE
Confidence 57899999999999999999999998754 65543
No 488
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=81.18 E-value=2 Score=44.39 Aligned_cols=70 Identities=16% Similarity=0.217 Sum_probs=49.4
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHHHHHHhChhhHHhhhhccccccCeEEEEeCCC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRIEELFASPLFNLLKSVHGQKIIDKVLPISGDA 179 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~f~~l~~~~p~~~~~~v~~v~gDl 179 (614)
..+++|+|.| .|.+|+.+++.+.+.|.+ |+++...+...... ..+ ..+.+|.
T Consensus 10 ~~~~~IlIlG-~G~lg~~la~aa~~lG~~---viv~d~~~~~p~~~----------------------~ad--~~~~~~~ 61 (377)
T 3orq_A 10 KFGATIGIIG-GGQLGKMMAQSAQKMGYK---VVVLDPSEDCPCRY----------------------VAH--EFIQAKY 61 (377)
T ss_dssp CTTCEEEEEC-CSHHHHHHHHHHHHTTCE---EEEEESCTTCTTGG----------------------GSS--EEEECCT
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHHCCCE---EEEEECCCCChhhh----------------------hCC--EEEECCC
Confidence 4678999999 577999999999999876 77777654321100 112 2456777
Q ss_pred CCCCCCCCHHHHHHHhccccEEEE
Q psy6053 180 EADELAIKESDRQLLASEVDIMIH 203 (614)
Q Consensus 180 ~~~~lGLs~~~~~~l~~~vd~ViH 203 (614)
.+.+ .+.++++++|+|.-
T Consensus 62 ~d~~------~l~~~~~~~dvi~~ 79 (377)
T 3orq_A 62 DDEK------ALNQLGQKCDVITY 79 (377)
T ss_dssp TCHH------HHHHHHHHCSEEEE
T ss_pred CCHH------HHHHHHHhCCccee
Confidence 7654 78888888998743
No 489
>2nvu_B Maltose binding protein/NEDD8-activating enzyme E1 catalytic subunit chimera; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: c.111.1.2 c.94.1.1
Probab=81.16 E-value=3.1 Score=47.72 Aligned_cols=92 Identities=16% Similarity=0.204 Sum_probs=56.8
Q ss_pred CCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccCCCcCHHHHH-----HHH---HhChhhHHhhhhccccccCeE
Q psy6053 101 TGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQKKGKNARQRI-----EEL---FASPLFNLLKSVHGQKIIDKV 172 (614)
Q Consensus 101 ~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~~~~~~~~Rl-----~~~---~~~~~f~~l~~~~p~~~~~~v 172 (614)
++.+|+|.|+ |-+|+.+++.|.+.| |.+|.+++...=..+-..|- +++ .....-+++++..|. -+|
T Consensus 410 ~~~~vlvvG~-GglG~~~~~~L~~~G--vg~i~l~D~d~v~~snl~rq~~~~~~~vg~~Ka~~~~~~l~~~np~---~~v 483 (805)
T 2nvu_B 410 DTCKVLVIGA-GGLGCELLKNLALSG--FRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPN---CNV 483 (805)
T ss_dssp HTCCEEEECC-SSHHHHHHHHHHTTT--CCEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHSTT---CEE
T ss_pred hCCeEEEECC-CHHHHHHHHHHHHcC--CCcEEEECCCeecccccccccccchhhcCChHHHHHHHHHHHHCCC---CEE
Confidence 5679999996 559999999999997 66888887754221111110 000 000112234444454 567
Q ss_pred EEEeCCCCCCCCCCCHHHHHHHhccccEEEEccc
Q psy6053 173 LPISGDAEADELAIKESDRQLLASEVDIMIHGAA 206 (614)
Q Consensus 173 ~~v~gDl~~~~lGLs~~~~~~l~~~vd~ViH~AA 206 (614)
+.+..+++..+ ..+++++|+||.|.-
T Consensus 484 ~~~~~~~~~~~--------~~~~~~~d~vv~~~d 509 (805)
T 2nvu_B 484 VPHFNKIQDFN--------DTFYRQFHIIVCGLD 509 (805)
T ss_dssp EEEESCGGGSC--------HHHHHTCSEEEECCS
T ss_pred EEEeccccccH--------HHHHhcCCEEEECCC
Confidence 88888887632 356788999998843
No 490
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=80.81 E-value=2.2 Score=42.28 Aligned_cols=34 Identities=18% Similarity=0.220 Sum_probs=28.7
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEE
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILM 136 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~Lv 136 (614)
..|++|+|.|+++-+|+.++..|++.|.. |+...
T Consensus 157 l~gk~vvVIG~s~iVG~p~A~lL~~~gAt---Vtv~h 190 (288)
T 1b0a_A 157 TFGLNAVVIGASNIVGRPMSMELLLAGCT---TTVTH 190 (288)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHTTTCE---EEEEC
T ss_pred CCCCEEEEECCChHHHHHHHHHHHHCCCe---EEEEe
Confidence 57899999999999999999999998754 66554
No 491
>1r0k_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH dependent, fosmidomycin, non- mevalonate pathway, oxidoreductase; 1.91A {Zymomonas mobilis} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1r0l_A*
Probab=80.62 E-value=6.1 Score=40.91 Aligned_cols=36 Identities=25% Similarity=0.404 Sum_probs=27.9
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEEccC
Q psy6053 103 KTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQK 139 (614)
Q Consensus 103 ~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~ 139 (614)
++|.|.|+||.+|+..++.+.+. ++--+|+++.-..
T Consensus 5 ~rI~ILGsTGSIG~~~l~vi~~~-p~~~~v~al~ag~ 40 (388)
T 1r0k_A 5 RTVTVLGATGSIGHSTLDLIERN-LDRYQVIALTANR 40 (388)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHT-GGGEEEEEEEESS
T ss_pred eEEEEECCCeEeHHHHHHHHHhC-cCcEEEEEEEcCC
Confidence 78999999999999999888775 5533577664443
No 492
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=80.53 E-value=3.4 Score=41.21 Aligned_cols=36 Identities=14% Similarity=0.230 Sum_probs=30.7
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccC
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQK 139 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~ 139 (614)
..+++|+|.|+ |-+|+.+++.|...|. +|++..|..
T Consensus 155 l~g~~v~IiG~-G~iG~~~a~~l~~~G~---~V~~~d~~~ 190 (300)
T 2rir_A 155 IHGSQVAVLGL-GRTGMTIARTFAALGA---NVKVGARSS 190 (300)
T ss_dssp STTSEEEEECC-SHHHHHHHHHHHHTTC---EEEEEESSH
T ss_pred CCCCEEEEEcc-cHHHHHHHHHHHHCCC---EEEEEECCH
Confidence 56899999995 9999999999998875 488888863
No 493
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}
Probab=80.41 E-value=2.7 Score=49.23 Aligned_cols=116 Identities=10% Similarity=0.131 Sum_probs=0.0
Q ss_pred ccccCCcEEEEecccccccHHHHHHHHhhCCCc-----cEEEEEEcc--------------------CCCcCHHHHHHHH
Q psy6053 97 GETFTGKTLFMTGASGFLGKVLLEKILRKSPNV-----KKIYILMRQ--------------------KKGKNARQRIEEL 151 (614)
Q Consensus 97 ~~~~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v-----~~V~~LvR~--------------------~~~~~~~~Rl~~~ 151 (614)
++..++.+|+|.|+ |-+|+.+++.|.+.| | .+|.+++.. .+...+.++++++
T Consensus 420 q~kL~~~~VlvVGa-GGlGsevlk~La~~G--v~~g~~G~i~lvD~D~Ve~SNLnRQ~lf~~~dvG~~Ka~~aa~~l~~i 496 (1015)
T 3cmm_A 420 QKKIANSKVFLVGS-GAIGCEMLKNWALLG--LGSGSDGYIVVTDNDSIEKSNLNRQFLFRPKDVGKNKSEVAAEAVCAM 496 (1015)
T ss_dssp HHHHHTCEEEEECC-SHHHHHHHHHHHHHT--TTCSTTCEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHH
T ss_pred HHHHhcCeEEEEec-CHHHHHHHHHHHHcC--cCcCCCCeEEEEeCCEeccccccccccCChhhCCCHHHHHHHHHHHHH
Q ss_pred HhChhhHHhhhhccccccCeEEEEeCCCCCCCCCCCHHHH----HHHhccccEEEEcccccChhHHHHHHHHHhHHHHHH
Q psy6053 152 FASPLFNLLKSVHGQKIIDKVLPISGDAEADELAIKESDR----QLLASEVDIMIHGAATIRFDEALKKAVLLNTRGTKM 227 (614)
Q Consensus 152 ~~~~~f~~l~~~~p~~~~~~v~~v~gDl~~~~lGLs~~~~----~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ 227 (614)
.|+ ...+|+.+...++... . ..++++.|+|+.+.- |+..-..
T Consensus 497 ------------NP~-v~~~v~~~~~~i~~~~-------~~~~~~~~~~~~D~Vi~a~D--------------n~~aR~~ 542 (1015)
T 3cmm_A 497 ------------NPD-LKGKINAKIDKVGPET-------EEIFNDSFWESLDFVTNALD--------------NVDARTY 542 (1015)
T ss_dssp ------------CGG-GTTTEEEECCCCSGGG-------TTTSCHHHHHHCSEEEECCS--------------SHHHHHH
T ss_pred ------------CCC-CcceEEEEecccCchh-------hhhccHhhhccCCEEEECCC--------------CHHHHHH
Q ss_pred HHHHHHHcCCCceEEEEeCceecc
Q psy6053 228 MLSLAKEMKHLELFVHISTAYCHL 251 (614)
Q Consensus 228 ll~la~~~~~~k~~V~vST~~~~~ 251 (614)
+-+.|.... +++|+.++....+
T Consensus 543 ln~~c~~~~--~Pli~~g~~G~~G 564 (1015)
T 3cmm_A 543 VDRRCVFYR--KPLLESGTLGTKG 564 (1015)
T ss_dssp HHHHHHHHT--CCEEEEEEETTEE
T ss_pred HHHHHHHcC--CcEEEeCCCcccc
No 494
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=80.36 E-value=8.3 Score=38.68 Aligned_cols=36 Identities=14% Similarity=0.178 Sum_probs=26.1
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEEccC
Q psy6053 102 GKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQK 139 (614)
Q Consensus 102 ~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~~ 139 (614)
+++|.|.|+.|++|...+..|.+.+.+ -|.+..|..
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~~~~--lvav~d~~~ 38 (318)
T 3oa2_A 3 MKNFALIGAAGYIAPRHMRAIKDTGNC--LVSAYDIND 38 (318)
T ss_dssp CCEEEEETTTSSSHHHHHHHHHHTTCE--EEEEECSSC
T ss_pred ceEEEEECCCcHHHHHHHHHHHhCCCE--EEEEEcCCH
Confidence 468999998899999999999886433 233444443
No 495
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=80.26 E-value=3.2 Score=42.70 Aligned_cols=36 Identities=19% Similarity=0.333 Sum_probs=28.3
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEcc
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQ 138 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~ 138 (614)
-.|.+|||+|| |-+|...+.-+...|.. +|++..++
T Consensus 181 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~--~Vi~~~~~ 216 (370)
T 4ej6_A 181 KAGSTVAILGG-GVIGLLTVQLARLAGAT--TVILSTRQ 216 (370)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCS--EEEEECSC
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCC--EEEEECCC
Confidence 35789999998 89999988877777753 57777665
No 496
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=80.05 E-value=1.8 Score=44.72 Aligned_cols=35 Identities=9% Similarity=-0.069 Sum_probs=28.4
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEc
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMR 137 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR 137 (614)
-.|.+|+|+||+|-+|...+.-+...|.+ |++.++
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~---Vi~~~~ 197 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGYI---PIATCS 197 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTCE---EEEEEC
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCCE---EEEEeC
Confidence 45789999999999999998888777754 776653
No 497
>2liu_A CURA; holo state, transferase; NMR {Lyngbya majuscula} PDB: 2liw_A*
Probab=79.95 E-value=1.8 Score=35.08 Aligned_cols=44 Identities=18% Similarity=0.193 Sum_probs=36.3
Q ss_pred ccCCCchhhhh-hhhHHHHHHHHHHhhcCCCCccccccCCCCchh
Q psy6053 44 ADFSLPLEFIR-CEVIVSELVMAANKVNNMNVPYETFYKPPVLSE 87 (614)
Q Consensus 44 ~~~~~~~~~~~-~s~~~~~l~~~l~~~~~~~~~~~~~~~~~tl~~ 87 (614)
.+...++.... +|+.++++...+++.+|++++...++++||+.+
T Consensus 41 i~~~~~~~~lG~DSl~~~~l~~~l~~~~g~~l~~~~l~~~~ti~~ 85 (99)
T 2liu_A 41 IAEDQKFVDLGLDSIVGVEWTTTINQTYNLNLKATKLYDYPTLLE 85 (99)
T ss_dssp CCSSSCHHHHTCCHHHHHHHHHHHHHHHTCCCCHHHHHHCCSHHH
T ss_pred cCCCCCHHHhCccHHHHHHHHHHHHHHHCCCcCHHHHHhCCCHHH
Confidence 34444554433 999999999999999999999999999999875
No 498
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=79.84 E-value=3.4 Score=41.74 Aligned_cols=37 Identities=16% Similarity=0.293 Sum_probs=31.2
Q ss_pred ccCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEcc
Q psy6053 99 TFTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQ 138 (614)
Q Consensus 99 ~~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~ 138 (614)
...|++|+|.|++.-+|+.++..|++.|. +|++..|.
T Consensus 174 ~l~gk~vvVIG~G~iVG~~~A~~L~~~gA---tVtv~nR~ 210 (320)
T 1edz_A 174 RLYGKKCIVINRSEIVGRPLAALLANDGA---TVYSVDVN 210 (320)
T ss_dssp TTTTCEEEEECCCTTTHHHHHHHHHTTSC---EEEEECSS
T ss_pred CCCCCEEEEECCCcchHHHHHHHHHHCCC---EEEEEeCc
Confidence 35789999999988999999999999874 47877765
No 499
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=79.60 E-value=1.1 Score=45.78 Aligned_cols=35 Identities=23% Similarity=0.358 Sum_probs=29.3
Q ss_pred CCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEcc
Q psy6053 101 TGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMRQ 138 (614)
Q Consensus 101 ~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR~ 138 (614)
.|.+|||+|| |-+|...+..+...|. .+|++.+|+
T Consensus 164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga--~~Vi~~~~~ 198 (343)
T 2dq4_A 164 SGKSVLITGA-GPIGLMAAMVVRASGA--GPILVSDPN 198 (343)
T ss_dssp TTSCEEEECC-SHHHHHHHHHHHHTTC--CSEEEECSC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCC--CEEEEECCC
Confidence 6889999999 9999999988777775 248888876
No 500
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=79.38 E-value=2.7 Score=41.46 Aligned_cols=37 Identities=19% Similarity=0.275 Sum_probs=28.6
Q ss_pred cCCcEEEEecccccccHHHHHHHHhhCCCccEEEEEEc
Q psy6053 100 FTGKTLFMTGASGFLGKVLLEKILRKSPNVKKIYILMR 137 (614)
Q Consensus 100 ~~~~~VLITGaTGFlG~~Ll~~Ll~~g~~v~~V~~LvR 137 (614)
.+|++++|.|+++-+|+.++..|++.|.+ .+|+...|
T Consensus 156 l~gk~vvVvG~s~iVG~p~A~lL~~~g~~-atVtv~h~ 192 (281)
T 2c2x_A 156 IAGAHVVVIGRGVTVGRPLGLLLTRRSEN-ATVTLCHT 192 (281)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHTSTTTC-CEEEEECT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHhcCCCC-CEEEEEEC
Confidence 57899999999999999999999887211 34665543
Done!