BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6056
(153 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|427782903|gb|JAA56903.1| Putative topoisomerase i binding arginine/serine-rich e3 ubiquitin
protein ligase [Rhipicephalus pulchellus]
Length = 592
Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/77 (40%), Positives = 46/77 (59%), Gaps = 7/77 (9%)
Query: 21 QASKKQKNDNPSEDDS--DGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQ 78
+A+K ++ PS+ S +RPTSP C ICL N+S+TD+C H FCF C+ +WS+
Sbjct: 29 EAAKGGRDATPSQPPSTKSPERPTSPEQSCAICLGPPENKSFTDSCFHTFCFSCLSEWSK 88
Query: 79 ISSESSPALCKMSKQRL 95
+ +E C + KQR
Sbjct: 89 VKAE-----CPLCKQRF 100
>gi|47219967|emb|CAG11500.1| unnamed protein product [Tetraodon nigroviridis]
Length = 714
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 52/110 (47%), Gaps = 11/110 (10%)
Query: 43 SPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRLLLFASAT 102
SP S+CPICL V NN SY D CLH+FCF CI +WS+ +E C + KQ +
Sbjct: 4 SPDSKCPICLDVFNNISYLDICLHKFCFRCIHEWSKNKAE-----CPLCKQPFHSIYHSI 58
Query: 103 ECLQYINVYDIMILQVNTSTFKGLFGVNIGRIDRLHLFTFGHFQSRKTRV 152
+ YD+ L+ G FG+ G R G Q R+ R
Sbjct: 59 KSENDYKQYDLRPLE------NGSFGIFGGARFRYRTTLTGINQQRQGRT 102
>gi|410918018|ref|XP_003972483.1| PREDICTED: E3 ubiquitin-protein ligase Topors-like [Takifugu
rubripes]
Length = 741
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 47/86 (54%), Gaps = 8/86 (9%)
Query: 43 SPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRLLLFASAT 102
SP S+CPICL NN SY D CLH+FCF CI +WS+ +E C + KQ +
Sbjct: 6 SPDSKCPICLDSFNNISYLDICLHKFCFRCIHEWSKNKAE-----CPLCKQPFNSIYHSI 60
Query: 103 ECLQYINVYDIMILQVNTSTFKGLFG 128
+ + YD+ L+ +F G+FG
Sbjct: 61 KSEKDYKQYDLRPLE--NGSF-GIFG 83
>gi|383854638|ref|XP_003702827.1| PREDICTED: uncharacterized protein LOC100876127 [Megachile
rotundata]
Length = 777
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 64/121 (52%), Gaps = 12/121 (9%)
Query: 30 NP-SEDDSDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALC 88
NP S D SDG SP C ICL L N S+TD+CLH+FCF C+ QWS+I +E LC
Sbjct: 26 NPDSSDRSDG--AVSPPPNCSICLGKLVNTSFTDSCLHQFCFTCLLQWSKIKTEC--PLC 81
Query: 89 KMSKQRLLLFASATECL-QYINVYDIMILQVNTSTFKGLFGVNIGRIDRLHLFT--FGHF 145
K + + ++ + E QY ++ L +N F+ ++ G R H T GH+
Sbjct: 82 KQTFKSIIHNVRSEEDYDQYHVPRELATLDLN---FELGHAMDAG-THRFHYRTTMTGHY 137
Query: 146 Q 146
+
Sbjct: 138 R 138
>gi|443713667|gb|ELU06401.1| hypothetical protein CAPTEDRAFT_223035 [Capitella teleta]
Length = 776
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 8/78 (10%)
Query: 41 PTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRLLLFAS 100
P SP C ICL +L N+S+TD C H FCF+C+ +WS++ A+C + KQ F S
Sbjct: 49 PGSPDPNCSICLGILENKSFTDGCFHTFCFVCLLEWSKVK-----AVCPLCKQ---PFKS 100
Query: 101 ATECLQYINVYDIMILQV 118
++ I YD +Q
Sbjct: 101 IIHNVRSIEDYDQYHVQT 118
>gi|432847160|ref|XP_004065960.1| PREDICTED: uncharacterized protein LOC101170493 [Oryzias latipes]
Length = 884
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 43 SPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRLLLFASAT 102
SP S+CPICL +N SY D CLH+FCF CI +WS+ +E C + KQ +
Sbjct: 28 SPDSKCPICLDGFHNVSYLDRCLHKFCFRCILEWSKNKAE-----CPLCKQPFNTIYHSI 82
Query: 103 ECLQYINVYDIMILQVNTSTFKGLFGV 129
+ Q Y++ QV S+F GV
Sbjct: 83 KSEQDFQKYELK-QQVENSSFGYFEGV 108
>gi|350424969|ref|XP_003493971.1| PREDICTED: hypothetical protein LOC100742727 [Bombus impatiens]
Length = 769
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 61/124 (49%), Gaps = 18/124 (14%)
Query: 30 NP-SEDDSDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALC 88
NP S D SDG SP C ICL L N S+TD+CLH+FCF C+ QWS+I +E C
Sbjct: 26 NPDSSDRSDG--AVSPPPNCSICLGKLVNTSFTDSCLHQFCFTCLLQWSKIKTE-----C 78
Query: 89 KMSKQRLLLFASATECLQYINVYDIMILQVNTSTFKGLF----GVNIGRIDRLHLFT--F 142
+ KQ F S ++ YD + +TF F +++G R H T
Sbjct: 79 PLCKQ---TFKSIIHNVRSEEDYDQYHVPREFATFDLNFELGHAMDVG-THRFHYRTTMT 134
Query: 143 GHFQ 146
GH +
Sbjct: 135 GHHR 138
>gi|327285025|ref|XP_003227235.1| PREDICTED: e3 ubiquitin-protein ligase Topors-like [Anolis
carolinensis]
Length = 1005
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 42 TSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRLLLFASA 101
SP S+CPICL N SY D C H+FCF CI++WS+ +E C + KQ F S
Sbjct: 56 ASPDSKCPICLDRFENISYLDQCWHKFCFRCIQEWSKNKAE-----CPLCKQ---PFHSV 107
Query: 102 TECLQYINVYDIMILQ-VNTSTFKGLFG 128
++ N Y + ++ T TF G
Sbjct: 108 VHSMKSQNDYKVYTVKPAETDTFGNPDG 135
>gi|390336726|ref|XP_003724412.1| PREDICTED: uncharacterized protein LOC576802 [Strongylocentrotus
purpuratus]
Length = 866
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 59/114 (51%), Gaps = 9/114 (7%)
Query: 4 SLFRQTQKRRLELPEIQQASKKQKNDNPSEDDSDGDRPTSPTSRCPICLLVLNNRSYTDT 63
S+ R QK E +KK+ + P++ D+ R SP CPICL ++S++D
Sbjct: 5 SVQRGLQKALSEASSKSVKTKKETDLAPTDSDASS-RSGSPDQCCPICLGKFKDKSFSDG 63
Query: 64 CLHEFCFLCIKQWSQISSESSPALCKMSKQRLLLFASATECLQYINVYDIMILQ 117
C H FCF CI++W+++ +S+ LCK F S + +VYD +LQ
Sbjct: 64 CFHRFCFQCIREWAKV--KSTCPLCKTP------FKSIIHNVVSSDVYDQYVLQ 109
>gi|380021895|ref|XP_003694792.1| PREDICTED: E3 ubiquitin-protein ligase Topors-like [Apis florea]
Length = 567
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 43/73 (58%), Gaps = 6/73 (8%)
Query: 19 IQQASKKQKNDNPSEDDSDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQ 78
I+ + Q DN D SDG SP C ICL L N S+TD+CLH+FCF C+ QWS+
Sbjct: 18 IKSEAPVQNPDN--SDRSDG--AVSPPPNCSICLGKLVNTSFTDSCLHQFCFTCLLQWSK 73
Query: 79 ISSESSPALCKMS 91
I +E LCK +
Sbjct: 74 IKTEC--PLCKQT 84
>gi|328697604|ref|XP_003240384.1| PREDICTED: e3 ubiquitin-protein ligase RING2-like [Acyrthosiphon
pisum]
Length = 172
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 40/62 (64%), Gaps = 7/62 (11%)
Query: 28 NDNPSEDDSDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPAL 87
N+ P+E RP +P SRC ICL LNN+ YT+ CLH FCF C+++WS SE + L
Sbjct: 5 NNGPTEG-----RPLTPDSRCAICLDDLNNKCYTNACLHLFCFECLQRWSD--SEPTCPL 57
Query: 88 CK 89
CK
Sbjct: 58 CK 59
>gi|110762874|ref|XP_394020.3| PREDICTED: hypothetical protein LOC410541 [Apis mellifera]
Length = 767
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 55/102 (53%), Gaps = 7/102 (6%)
Query: 19 IQQASKKQKNDNPSEDDSDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQ 78
I+ + Q DN D SDG SP C ICL L N S+TD+CLH+FCF C+ QWS+
Sbjct: 18 IKSEAPVQNPDN--SDRSDG--AVSPPPNCSICLGKLVNTSFTDSCLHQFCFTCLLQWSK 73
Query: 79 ISSESSPALCKMSKQRLLLFASATECL-QYINVYDIMILQVN 119
I +E LCK + + ++ + E QY ++ L +N
Sbjct: 74 IKTEC--PLCKQTFKSIIHNVRSEEDYDQYHVPRELATLDLN 113
>gi|47207659|emb|CAF92282.1| unnamed protein product [Tetraodon nigroviridis]
Length = 473
Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 32/51 (62%), Gaps = 5/51 (9%)
Query: 43 SPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQ 93
SP S+CPICL NN +Y D CLH FCF CI++WS +E C + KQ
Sbjct: 7 SPDSKCPICLDRFNNLAYLDRCLHRFCFPCIQEWSHNKAE-----CPLCKQ 52
>gi|351713048|gb|EHB15967.1| E3 ubiquitin-protein ligase Topors, partial [Heterocephalus glaber]
Length = 1042
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 11/92 (11%)
Query: 42 TSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRLLLFASA 101
SP S+CPICL +N SY D CLH+FCF C+++WS+ +E C + KQ F S
Sbjct: 97 ASPDSKCPICLDRFDNVSYLDRCLHKFCFRCVQEWSKNKAE-----CPLCKQ---PFDSI 148
Query: 102 TECLQYINVYDIMILQVNTSTFKGLFGVNIGR 133
++ + + +L+ ++ G F GR
Sbjct: 149 FHSVRAEDDFKEYVLR---PSYNGSFATPDGR 177
>gi|395855877|ref|XP_003800373.1| PREDICTED: E3 ubiquitin-protein ligase Topors [Otolemur garnettii]
Length = 1114
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 11/92 (11%)
Query: 42 TSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRLLLFASA 101
SP S+CPICL +N SY D CLH+FCF C+++WS+ +E C + KQ F S
Sbjct: 180 ASPDSKCPICLDRFDNVSYLDRCLHKFCFRCVQEWSKNKAE-----CPLCKQ---PFDSI 231
Query: 102 TECLQYINVYDIMILQVNTSTFKGLFGVNIGR 133
++ + + +L+ ++ G F GR
Sbjct: 232 FHSVRAEDDFKEYVLR---PSYNGSFATPDGR 260
>gi|322779464|gb|EFZ09656.1| hypothetical protein SINV_05966 [Solenopsis invicta]
Length = 811
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 68/139 (48%), Gaps = 10/139 (7%)
Query: 19 IQQASKKQKNDNPSEDDSDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQ 78
I+ + Q DN + SDG SP C ICL L N S+TD+CLH+FCF C+ QWS+
Sbjct: 18 IKSEAPIQNADN--SERSDGT--ASPPPNCSICLGKLINTSFTDSCLHQFCFTCLLQWSK 73
Query: 79 ISSESSPALCKMSKQRLLLFASATECLQYINVYDIMILQVN----TSTFKGLFGVNIGRI 134
I +E LCK + + ++ + E +V + Q+ T+T F V+
Sbjct: 74 IKTEC--PLCKQTFKSIIHNVRSEEDYDQYHVPRDLASQIPQPQVTATLDVNFDVDWNVA 131
Query: 135 DRLHLFTFGHFQSRKTRVP 153
R +++ + ++ VP
Sbjct: 132 PRRFVYSLSYTRTPLHNVP 150
>gi|241695303|ref|XP_002413046.1| conserved hypothetical protein [Ixodes scapularis]
gi|215506860|gb|EEC16354.1| conserved hypothetical protein [Ixodes scapularis]
Length = 398
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 42/75 (56%), Gaps = 8/75 (10%)
Query: 38 GDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRLLL 97
G R +SP C ICL N+S+TD+C H FCF C+ +WS++ +E C + KQR
Sbjct: 9 GRRSSSPEESCAICLGKPENKSFTDSCFHTFCFSCLLEWSKVKAE-----CPLCKQR--- 60
Query: 98 FASATECLQYINVYD 112
F S ++ + YD
Sbjct: 61 FKSIVHNVRSFDDYD 75
>gi|291383109|ref|XP_002707993.1| PREDICTED: topoisomerase I binding, arginine/serine-rich
[Oryctolagus cuniculus]
Length = 1073
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 33/48 (68%), Gaps = 2/48 (4%)
Query: 42 TSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCK 89
SP S+CPICL +N SY D CLH+FCF C+++WS+ +E LCK
Sbjct: 133 ASPDSKCPICLDRFDNVSYLDRCLHKFCFRCVQEWSKNKAEC--PLCK 178
>gi|329744626|ref|NP_001179507.2| E3 ubiquitin-protein ligase Topors [Bos taurus]
Length = 1037
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 33/48 (68%), Gaps = 2/48 (4%)
Query: 42 TSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCK 89
SP S+CPICL +N SY D CLH+FCF C+++WS+ +E LCK
Sbjct: 97 ASPDSKCPICLDRFDNVSYLDRCLHKFCFRCVQEWSKNKAEC--PLCK 142
>gi|296484928|tpg|DAA27043.1| TPA: topoisomerase I binding, arginine/serine-rich [Bos taurus]
Length = 1100
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 33/48 (68%), Gaps = 2/48 (4%)
Query: 42 TSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCK 89
SP S+CPICL +N SY D CLH+FCF C+++WS+ +E LCK
Sbjct: 160 ASPDSKCPICLDRFDNVSYLDRCLHKFCFRCVQEWSKNKAEC--PLCK 205
>gi|426220551|ref|XP_004004478.1| PREDICTED: E3 ubiquitin-protein ligase Topors [Ovis aries]
Length = 969
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 33/48 (68%), Gaps = 2/48 (4%)
Query: 42 TSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCK 89
SP S+CPICL +N SY D CLH+FCF C+++WS+ +E LCK
Sbjct: 30 ASPDSKCPICLDRFDNVSYLDRCLHKFCFRCVQEWSKNKAEC--PLCK 75
>gi|296190083|ref|XP_002743044.1| PREDICTED: E3 ubiquitin-protein ligase Topors isoform 1 [Callithrix
jacchus]
Length = 1045
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 33/48 (68%), Gaps = 2/48 (4%)
Query: 42 TSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCK 89
SP S+CPICL +N SY D CLH+FCF C+++WS+ +E LCK
Sbjct: 97 ASPDSKCPICLDRFDNVSYLDRCLHKFCFRCVQEWSKNKAEC--PLCK 142
>gi|157821751|ref|NP_001102128.1| E3 ubiquitin-protein ligase Topors [Rattus norvegicus]
gi|149045629|gb|EDL98629.1| topoisomerase I binding, arginine/serine-rich (predicted) [Rattus
norvegicus]
Length = 1042
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 33/48 (68%), Gaps = 2/48 (4%)
Query: 42 TSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCK 89
SP S+CPICL +N SY D CLH+FCF C+++WS+ +E LCK
Sbjct: 98 ASPDSKCPICLDRFDNVSYLDRCLHKFCFRCVQEWSKNKAEC--PLCK 143
>gi|335296431|ref|XP_003130738.2| PREDICTED: E3 ubiquitin-protein ligase Topors isoform 1 [Sus
scrofa]
Length = 1046
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 33/48 (68%), Gaps = 2/48 (4%)
Query: 42 TSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCK 89
SP S+CPICL +N SY D CLH+FCF C+++WS+ +E LCK
Sbjct: 97 ASPDSKCPICLDRFDNVSYLDRCLHKFCFRCVQEWSKNKAEC--PLCK 142
>gi|116283605|gb|AAH19421.1| Topors protein [Mus musculus]
Length = 889
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 33/48 (68%), Gaps = 2/48 (4%)
Query: 42 TSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCK 89
SP S+CPICL +N SY D CLH+FCF C+++WS+ +E LCK
Sbjct: 98 ASPDSKCPICLDRFDNVSYLDRCLHKFCFRCVQEWSKNKAEC--PLCK 143
>gi|194224907|ref|XP_001498962.2| PREDICTED: e3 ubiquitin-protein ligase Topors [Equus caballus]
Length = 980
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 33/48 (68%), Gaps = 2/48 (4%)
Query: 42 TSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCK 89
SP S+CPICL +N SY D CLH+FCF C+++WS+ +E LCK
Sbjct: 32 ASPDSKCPICLDRFDNVSYLDRCLHKFCFRCVQEWSKNKAEC--PLCK 77
>gi|27370731|gb|AAH37141.1| Topors protein, partial [Mus musculus]
Length = 887
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 33/48 (68%), Gaps = 2/48 (4%)
Query: 42 TSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCK 89
SP S+CPICL +N SY D CLH+FCF C+++WS+ +E LCK
Sbjct: 98 ASPDSKCPICLDRFDNVSYLDRCLHKFCFRCVQEWSKNKAEC--PLCK 143
>gi|15919933|dbj|BAB69457.1| p53-binding protein-3 [Mus musculus]
Length = 1033
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 33/48 (68%), Gaps = 2/48 (4%)
Query: 42 TSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCK 89
SP S+CPICL +N SY D CLH+FCF C+++WS+ +E LCK
Sbjct: 98 ASPDSKCPICLDRFDNVSYLDRCLHKFCFRCVQEWSKNKAEC--PLCK 143
>gi|335296433|ref|XP_003357776.1| PREDICTED: E3 ubiquitin-protein ligase Topors isoform 2 [Sus
scrofa]
Length = 981
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 33/48 (68%), Gaps = 2/48 (4%)
Query: 42 TSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCK 89
SP S+CPICL +N SY D CLH+FCF C+++WS+ +E LCK
Sbjct: 32 ASPDSKCPICLDRFDNVSYLDRCLHKFCFRCVQEWSKNKAEC--PLCK 77
>gi|301785796|ref|XP_002928313.1| PREDICTED: e3 ubiquitin-protein ligase Topors-like [Ailuropoda
melanoleuca]
Length = 1043
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 33/48 (68%), Gaps = 2/48 (4%)
Query: 42 TSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCK 89
SP S+CPICL +N SY D CLH+FCF C+++WS+ +E LCK
Sbjct: 97 ASPDSKCPICLDRFDNVSYLDRCLHKFCFRCVQEWSKNKAEC--PLCK 142
>gi|74137241|dbj|BAE22003.1| unnamed protein product [Mus musculus]
Length = 824
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 33/48 (68%), Gaps = 2/48 (4%)
Query: 42 TSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCK 89
SP S+CPICL +N SY D CLH+FCF C+++WS+ +E LCK
Sbjct: 98 ASPDSKCPICLDRFDNVSYLDRCLHKFCFRCVQEWSKNKAEC--PLCK 143
>gi|410978422|ref|XP_003995590.1| PREDICTED: E3 ubiquitin-protein ligase Topors isoform 1 [Felis
catus]
Length = 1042
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 33/48 (68%), Gaps = 2/48 (4%)
Query: 42 TSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCK 89
SP S+CPICL +N SY D CLH+FCF C+++WS+ +E LCK
Sbjct: 97 ASPDSKCPICLDRFDNVSYLDRCLHKFCFRCVQEWSKNKAEC--PLCK 142
>gi|332228628|ref|XP_003263491.1| PREDICTED: E3 ubiquitin-protein ligase Topors isoform 1 [Nomascus
leucogenys]
Length = 1045
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 33/48 (68%), Gaps = 2/48 (4%)
Query: 42 TSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCK 89
SP S+CPICL +N SY D CLH+FCF C+++WS+ +E LCK
Sbjct: 97 ASPDSKCPICLDRFDNVSYLDRCLHKFCFRCVQEWSKNKAEC--PLCK 142
>gi|426361527|ref|XP_004047959.1| PREDICTED: E3 ubiquitin-protein ligase Topors isoform 4 [Gorilla
gorilla gorilla]
Length = 978
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Query: 43 SPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCK 89
SP S+CPICL +N SY D CLH+FCF C+++WS+ +E LCK
Sbjct: 31 SPDSKCPICLDRFDNVSYLDRCLHKFCFRCVQEWSKNKAEC--PLCK 75
>gi|426361525|ref|XP_004047958.1| PREDICTED: E3 ubiquitin-protein ligase Topors isoform 3 [Gorilla
gorilla gorilla]
Length = 980
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Query: 43 SPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCK 89
SP S+CPICL +N SY D CLH+FCF C+++WS+ +E LCK
Sbjct: 33 SPDSKCPICLDRFDNVSYLDRCLHKFCFRCVQEWSKNKAEC--PLCK 77
>gi|29336062|ref|NP_598858.2| E3 ubiquitin-protein ligase Topors [Mus musculus]
gi|81895461|sp|Q80Z37.1|TOPRS_MOUSE RecName: Full=E3 ubiquitin-protein ligase Topors; AltName:
Full=SUMO1-protein E3 ligase Topors; AltName:
Full=Topoisomerase I-binding RING finger protein;
AltName: Full=Topoisomerase I-binding
arginine/serine-rich protein; AltName: Full=Tumor
suppressor p53-binding protein 3; Short=p53-binding
protein 3; Short=p53BP3
gi|28849251|dbj|BAC65157.1| topoisomerase 1-binding RING finger protein [Mus musculus]
gi|148673497|gb|EDL05444.1| topoisomerase I binding, arginine/serine-rich [Mus musculus]
Length = 1033
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 33/48 (68%), Gaps = 2/48 (4%)
Query: 42 TSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCK 89
SP S+CPICL +N SY D CLH+FCF C+++WS+ +E LCK
Sbjct: 98 ASPDSKCPICLDRFDNVSYLDRCLHKFCFRCVQEWSKNKAEC--PLCK 143
>gi|332831685|ref|XP_001156785.2| PREDICTED: E3 ubiquitin-protein ligase Topors isoform 2 [Pan
troglodytes]
gi|410349155|gb|JAA41181.1| topoisomerase I binding, arginine/serine-rich, E3 ubiquitin
protein ligase [Pan troglodytes]
Length = 980
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Query: 43 SPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCK 89
SP S+CPICL +N SY D CLH+FCF C+++WS+ +E LCK
Sbjct: 33 SPDSKCPICLDRFDNVSYLDRCLHKFCFRCVQEWSKNKAEC--PLCK 77
>gi|281341396|gb|EFB16980.1| hypothetical protein PANDA_018228 [Ailuropoda melanoleuca]
Length = 978
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 33/48 (68%), Gaps = 2/48 (4%)
Query: 42 TSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCK 89
SP S+CPICL +N SY D CLH+FCF C+++WS+ +E LCK
Sbjct: 32 ASPDSKCPICLDRFDNVSYLDRCLHKFCFRCVQEWSKNKAEC--PLCK 77
>gi|440893953|gb|ELR46542.1| E3 ubiquitin-protein ligase Topors, partial [Bos grunniens mutus]
Length = 1037
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 33/48 (68%), Gaps = 2/48 (4%)
Query: 42 TSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCK 89
SP S+CPICL +N SY D CLH+FCF C+++WS+ +E LCK
Sbjct: 97 ASPDSKCPICLDRFDNVSYLDRCLHKFCFRCVQEWSKNKAEC--PLCK 142
>gi|426361521|ref|XP_004047956.1| PREDICTED: E3 ubiquitin-protein ligase Topors isoform 1 [Gorilla
gorilla gorilla]
gi|426361523|ref|XP_004047957.1| PREDICTED: E3 ubiquitin-protein ligase Topors isoform 2 [Gorilla
gorilla gorilla]
Length = 1045
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 33/48 (68%), Gaps = 2/48 (4%)
Query: 42 TSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCK 89
SP S+CPICL +N SY D CLH+FCF C+++WS+ +E LCK
Sbjct: 97 ASPDSKCPICLDRFDNVSYLDRCLHKFCFRCVQEWSKNKAEC--PLCK 142
>gi|410978424|ref|XP_003995591.1| PREDICTED: E3 ubiquitin-protein ligase Topors isoform 2 [Felis
catus]
Length = 977
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 33/48 (68%), Gaps = 2/48 (4%)
Query: 42 TSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCK 89
SP S+CPICL +N SY D CLH+FCF C+++WS+ +E LCK
Sbjct: 32 ASPDSKCPICLDRFDNVSYLDRCLHKFCFRCVQEWSKNKAEC--PLCK 77
>gi|345777507|ref|XP_538699.3| PREDICTED: E3 ubiquitin-protein ligase Topors isoform 2 [Canis
lupus familiaris]
Length = 978
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 33/48 (68%), Gaps = 2/48 (4%)
Query: 42 TSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCK 89
SP S+CPICL +N SY D CLH+FCF C+++WS+ +E LCK
Sbjct: 32 ASPDSKCPICLDRFDNVSYLDRCLHKFCFRCVQEWSKNKAEC--PLCK 77
>gi|332228632|ref|XP_003263493.1| PREDICTED: E3 ubiquitin-protein ligase Topors isoform 3 [Nomascus
leucogenys]
Length = 978
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Query: 43 SPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCK 89
SP S+CPICL +N SY D CLH+FCF C+++WS+ +E LCK
Sbjct: 31 SPDSKCPICLDRFDNVSYLDRCLHKFCFRCVQEWSKNKAEC--PLCK 75
>gi|431902874|gb|ELK09089.1| topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein
ligase [Pteropus alecto]
Length = 1078
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 33/48 (68%), Gaps = 2/48 (4%)
Query: 42 TSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCK 89
SP S+CPICL +N SY D CLH+FCF C+++WS+ +E LCK
Sbjct: 133 ASPDSKCPICLDRFDNVSYLDRCLHKFCFRCVQEWSKNKAEC--PLCK 178
>gi|403297890|ref|XP_003939779.1| PREDICTED: E3 ubiquitin-protein ligase Topors [Saimiri boliviensis
boliviensis]
Length = 1045
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 33/48 (68%), Gaps = 2/48 (4%)
Query: 42 TSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCK 89
SP S+CPICL +N SY D CLH+FCF C+++WS+ +E LCK
Sbjct: 97 ASPDSKCPICLDRFDNVSYLDRCLHKFCFRCVQEWSKNKAEC--PLCK 142
>gi|397520029|ref|XP_003830150.1| PREDICTED: E3 ubiquitin-protein ligase Topors isoform 1 [Pan
paniscus]
gi|397520031|ref|XP_003830151.1| PREDICTED: E3 ubiquitin-protein ligase Topors isoform 2 [Pan
paniscus]
Length = 1045
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 33/48 (68%), Gaps = 2/48 (4%)
Query: 42 TSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCK 89
SP S+CPICL +N SY D CLH+FCF C+++WS+ +E LCK
Sbjct: 97 ASPDSKCPICLDRFDNVSYLDRCLHKFCFRCVQEWSKNKAEC--PLCK 142
>gi|114624060|ref|XP_001156839.1| PREDICTED: E3 ubiquitin-protein ligase Topors isoform 3 [Pan
troglodytes]
gi|410042516|ref|XP_003951457.1| PREDICTED: E3 ubiquitin-protein ligase Topors [Pan troglodytes]
gi|410219910|gb|JAA07174.1| topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein
ligase [Pan troglodytes]
gi|410266120|gb|JAA21026.1| topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein
ligase [Pan troglodytes]
gi|410293742|gb|JAA25471.1| topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein
ligase [Pan troglodytes]
gi|410349153|gb|JAA41180.1| topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein
ligase [Pan troglodytes]
Length = 1045
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 33/48 (68%), Gaps = 2/48 (4%)
Query: 42 TSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCK 89
SP S+CPICL +N SY D CLH+FCF C+++WS+ +E LCK
Sbjct: 97 ASPDSKCPICLDRFDNVSYLDRCLHKFCFRCVQEWSKNKAEC--PLCK 142
>gi|355725634|gb|AES08619.1| topoisomerase I binding, arginine/serine-rich [Mustela putorius
furo]
Length = 967
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 33/48 (68%), Gaps = 2/48 (4%)
Query: 42 TSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCK 89
SP S+CPICL +N SY D CLH+FCF C+++WS+ +E LCK
Sbjct: 22 ASPDSKCPICLDRFDNVSYLDRCLHKFCFRCVQEWSKNKAEC--PLCK 67
>gi|332228630|ref|XP_003263492.1| PREDICTED: E3 ubiquitin-protein ligase Topors isoform 2 [Nomascus
leucogenys]
Length = 980
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Query: 43 SPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCK 89
SP S+CPICL +N SY D CLH+FCF C+++WS+ +E LCK
Sbjct: 33 SPDSKCPICLDRFDNVSYLDRCLHKFCFRCVQEWSKNKAEC--PLCK 77
>gi|114624062|ref|XP_001156719.1| PREDICTED: E3 ubiquitin-protein ligase Topors isoform 1 [Pan
troglodytes]
Length = 978
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Query: 43 SPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCK 89
SP S+CPICL +N SY D CLH+FCF C+++WS+ +E LCK
Sbjct: 31 SPDSKCPICLDRFDNVSYLDRCLHKFCFRCVQEWSKNKAEC--PLCK 75
>gi|26251937|gb|AAH40797.1| Topoisomerase I binding, arginine/serine-rich [Mus musculus]
Length = 1033
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 33/48 (68%), Gaps = 2/48 (4%)
Query: 42 TSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCK 89
SP S+CPICL +N SY D CLH+FCF C+++WS+ +E LCK
Sbjct: 98 ASPDSKCPICLDRFDNVSYLDRCLHKFCFRCVQEWSKNKAEC--PLCK 143
>gi|402897214|ref|XP_003911665.1| PREDICTED: E3 ubiquitin-protein ligase Topors [Papio anubis]
Length = 1045
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 33/48 (68%), Gaps = 2/48 (4%)
Query: 42 TSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCK 89
SP S+CPICL +N SY D CLH+FCF C+++WS+ +E LCK
Sbjct: 97 ASPDSKCPICLDRFDNVSYLDRCLHKFCFRCVQEWSKNKAEC--PLCK 142
>gi|297684247|ref|XP_002819762.1| PREDICTED: E3 ubiquitin-protein ligase Topors isoform 1 [Pongo
abelii]
gi|395740389|ref|XP_003777412.1| PREDICTED: E3 ubiquitin-protein ligase Topors [Pongo abelii]
Length = 1045
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 33/48 (68%), Gaps = 2/48 (4%)
Query: 42 TSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCK 89
SP S+CPICL +N SY D CLH+FCF C+++WS+ +E LCK
Sbjct: 97 ASPDSKCPICLDRFDNVSYLDRCLHKFCFRCVQEWSKNKAEC--PLCK 142
>gi|307344673|ref|NP_001182551.1| E3 ubiquitin-protein ligase Topors isoform 2 [Homo sapiens]
gi|9664148|dbj|BAB03715.1| RING-finger protein [Homo sapiens]
Length = 980
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Query: 43 SPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCK 89
SP S+CPICL +N SY D CLH+FCF C+++WS+ +E LCK
Sbjct: 33 SPDSKCPICLDRFDNVSYLDRCLHKFCFRCVQEWSKNKAEC--PLCK 77
>gi|388490356|ref|NP_001253070.1| E3 ubiquitin-protein ligase Topors [Macaca mulatta]
gi|380808654|gb|AFE76202.1| E3 ubiquitin-protein ligase Topors isoform 1 [Macaca mulatta]
gi|383415009|gb|AFH30718.1| E3 ubiquitin-protein ligase Topors isoform 1 [Macaca mulatta]
Length = 1045
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 33/48 (68%), Gaps = 2/48 (4%)
Query: 42 TSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCK 89
SP S+CPICL +N SY D CLH+FCF C+++WS+ +E LCK
Sbjct: 97 ASPDSKCPICLDRFDNVSYLDRCLHKFCFRCVQEWSKNKAEC--PLCK 142
>gi|348569863|ref|XP_003470717.1| PREDICTED: E3 ubiquitin-protein ligase Topors-like [Cavia
porcellus]
Length = 1142
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 33/48 (68%), Gaps = 2/48 (4%)
Query: 42 TSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCK 89
SP S+CPICL +N SY D CLH+FCF C+++WS+ +E LCK
Sbjct: 198 ASPDSKCPICLDRFDNVSYLDRCLHKFCFRCVQEWSKNKAEC--PLCK 243
>gi|359320817|ref|XP_003639434.1| PREDICTED: E3 ubiquitin-protein ligase Topors isoform 1 [Canis
lupus familiaris]
Length = 1043
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 33/48 (68%), Gaps = 2/48 (4%)
Query: 42 TSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCK 89
SP S+CPICL +N SY D CLH+FCF C+++WS+ +E LCK
Sbjct: 97 ASPDSKCPICLDRFDNVSYLDRCLHKFCFRCVQEWSKNKAEC--PLCK 142
>gi|40805104|ref|NP_005793.2| E3 ubiquitin-protein ligase Topors isoform 1 [Homo sapiens]
gi|74752935|sp|Q9NS56.1|TOPRS_HUMAN RecName: Full=E3 ubiquitin-protein ligase Topors; AltName:
Full=SUMO1-protein E3 ligase Topors; AltName:
Full=Topoisomerase I-binding RING finger protein;
AltName: Full=Topoisomerase I-binding
arginine/serine-rich protein; AltName: Full=Tumor
suppressor p53-binding protein 3; Short=p53-binding
protein 3; Short=p53BP3
gi|9664146|dbj|BAB03714.1| RING-finger protein [Homo sapiens]
gi|119578950|gb|EAW58546.1| topoisomerase I binding, arginine/serine-rich [Homo sapiens]
Length = 1045
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 33/48 (68%), Gaps = 2/48 (4%)
Query: 42 TSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCK 89
SP S+CPICL +N SY D CLH+FCF C+++WS+ +E LCK
Sbjct: 97 ASPDSKCPICLDRFDNVSYLDRCLHKFCFRCVQEWSKNKAEC--PLCK 142
>gi|4566495|gb|AAD23379.1|AF098300_1 topoisomerase I-binding RS protein [Homo sapiens]
Length = 1045
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 33/48 (68%), Gaps = 2/48 (4%)
Query: 42 TSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCK 89
SP S+CPICL +N SY D CLH+FCF C+++WS+ +E LCK
Sbjct: 97 ASPDSKCPICLDRFDNVSYLDRCLHKFCFRCVQEWSKNKAEC--PLCK 142
>gi|74224529|dbj|BAE25253.1| unnamed protein product [Mus musculus]
Length = 756
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 33/48 (68%), Gaps = 2/48 (4%)
Query: 42 TSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCK 89
SP S+CPICL +N SY D CLH+FCF C+++WS+ +E LCK
Sbjct: 98 ASPDSKCPICLDRFDNVSYLDRCLHKFCFRCVQEWSKNKAEC--PLCK 143
>gi|355567707|gb|EHH24048.1| E3 ubiquitin-protein ligase Topors [Macaca mulatta]
Length = 1140
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 33/48 (68%), Gaps = 2/48 (4%)
Query: 42 TSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCK 89
SP S+CPICL +N SY D CLH+FCF C+++WS+ +E LCK
Sbjct: 192 ASPDSKCPICLDRFDNVSYLDRCLHKFCFRCVQEWSKNKAEC--PLCK 237
>gi|344271720|ref|XP_003407685.1| PREDICTED: E3 ubiquitin-protein ligase Topors [Loxodonta africana]
Length = 1115
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 33/48 (68%), Gaps = 2/48 (4%)
Query: 42 TSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCK 89
SP S+CPICL +N SY D CLH+FCF C+++WS+ +E LCK
Sbjct: 171 ASPDSKCPICLDRFDNVSYLDRCLHKFCFRCVQEWSKNKAEC--PLCK 216
>gi|355753279|gb|EHH57325.1| E3 ubiquitin-protein ligase Topors [Macaca fascicularis]
Length = 1140
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 33/48 (68%), Gaps = 2/48 (4%)
Query: 42 TSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCK 89
SP S+CPICL +N SY D CLH+FCF C+++WS+ +E LCK
Sbjct: 192 ASPDSKCPICLDRFDNVSYLDRCLHKFCFRCVQEWSKNKAEC--PLCK 237
>gi|344240955|gb|EGV97058.1| E3 ubiquitin-protein ligase Topors [Cricetulus griseus]
Length = 964
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 33/48 (68%), Gaps = 2/48 (4%)
Query: 42 TSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCK 89
SP S+CPICL +N SY D CLH+FCF C+++WS+ +E LCK
Sbjct: 21 ASPDSKCPICLDRFDNVSYLDRCLHKFCFSCVQEWSKNKAEC--PLCK 66
>gi|38174276|gb|AAH60884.1| Topoisomerase I binding, arginine/serine-rich [Homo sapiens]
Length = 1045
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 33/48 (68%), Gaps = 2/48 (4%)
Query: 42 TSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCK 89
SP S+CPICL +N SY D CLH+FCF C+++WS+ +E LCK
Sbjct: 97 ASPDSKCPICLDRFDNVSYLDRCLHKFCFRCVQEWSKNKAEC--PLCK 142
>gi|74148982|dbj|BAE32164.1| unnamed protein product [Mus musculus]
Length = 750
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 33/48 (68%), Gaps = 2/48 (4%)
Query: 42 TSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCK 89
SP S+CPICL +N SY D CLH+FCF C+++WS+ +E LCK
Sbjct: 98 ASPDSKCPICLDRFDNVSYLDRCLHKFCFRCVQEWSKNKAEC--PLCK 143
>gi|354487713|ref|XP_003506016.1| PREDICTED: E3 ubiquitin-protein ligase Topors-like [Cricetulus
griseus]
Length = 973
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 33/48 (68%), Gaps = 2/48 (4%)
Query: 42 TSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCK 89
SP S+CPICL +N SY D CLH+FCF C+++WS+ +E LCK
Sbjct: 30 ASPDSKCPICLDRFDNVSYLDRCLHKFCFSCVQEWSKNKAEC--PLCK 75
>gi|432110822|gb|ELK34299.1| E3 ubiquitin-protein ligase Topors [Myotis davidii]
Length = 1078
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 33/48 (68%), Gaps = 2/48 (4%)
Query: 42 TSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCK 89
SP S+CPICL +N SY D CLH+FCF C+++WS+ +E LCK
Sbjct: 133 ASPDSKCPICLDRFDNVSYLDRCLHKFCFRCVQEWSKNKAEC--PLCK 178
>gi|74185187|dbj|BAC31981.2| unnamed protein product [Mus musculus]
Length = 639
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 33/48 (68%), Gaps = 2/48 (4%)
Query: 42 TSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCK 89
SP S+CPICL +N SY D CLH+FCF C+++WS+ +E LCK
Sbjct: 98 ASPDSKCPICLDRFDNVSYLDRCLHKFCFRCVQEWSKNKAEC--PLCK 143
>gi|357625690|gb|EHJ76052.1| putative topoisomerase 1-binding RING finger [Danaus plexippus]
Length = 679
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 38/70 (54%), Gaps = 11/70 (15%)
Query: 30 NPSEDDSDGDRP------TSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSES 83
NPS SD P SP C ICL N+S+TDTCLHEFCF C+ WS++
Sbjct: 16 NPSGVKSDDSSPRNESGRGSPPPNCAICLGTCRNKSFTDTCLHEFCFKCLLTWSKVK--- 72
Query: 84 SPALCKMSKQ 93
A+C + KQ
Sbjct: 73 --AVCPLCKQ 80
>gi|332021837|gb|EGI62177.1| E3 ubiquitin-protein ligase Topor [Acromyrmex echinatior]
Length = 1320
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
Query: 34 DDSDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMS 91
D+++ SP C ICL L N S+TD+CLH+FCF C+ QWS+I +E LCK +
Sbjct: 555 DNNERSDAASPPPNCSICLGKLVNTSFTDSCLHQFCFTCLLQWSKIKTEC--PLCKQT 610
>gi|74148726|dbj|BAE24298.1| unnamed protein product [Mus musculus]
Length = 559
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 33/48 (68%), Gaps = 2/48 (4%)
Query: 42 TSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCK 89
SP S+CPICL +N SY D CLH+FCF C+++WS+ +E LCK
Sbjct: 98 ASPDSKCPICLDRFDNVSYLDRCLHKFCFRCVQEWSKNKAEC--PLCK 143
>gi|116487588|gb|AAI25820.1| Si:ch211-145b13.4 protein [Danio rerio]
Length = 846
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 42/91 (46%), Gaps = 11/91 (12%)
Query: 42 TSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRLLLFASA 101
SP S+CPICL N SY D CLH+FCF CI +WS+ +E C + KQ F
Sbjct: 22 ASPESKCPICLDHFKNISYLDVCLHKFCFCCIHEWSKNKAE-----CPLCKQPFNSFYHT 76
Query: 102 TECLQYINVYDIMILQVNTSTFKGLFGVNIG 132
+ +D+ T G FG G
Sbjct: 77 IKSEDDYKRFDLR------PTENGSFGNMAG 101
>gi|307172085|gb|EFN63665.1| E3 ubiquitin-protein ligase Topors [Camponotus floridanus]
Length = 1312
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 40/63 (63%), Gaps = 5/63 (7%)
Query: 30 NPSEDD-SDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALC 88
NP + SDG TSP C ICL L N S+TD+CLH+FCF C+ +WS+I +E LC
Sbjct: 548 NPDNSERSDG--ATSPPPNCSICLGKLVNTSFTDSCLHQFCFNCLLEWSKIKTEC--PLC 603
Query: 89 KMS 91
K +
Sbjct: 604 KQT 606
>gi|125803832|ref|XP_687895.2| PREDICTED: hypothetical protein LOC324197 [Danio rerio]
Length = 999
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 42/91 (46%), Gaps = 11/91 (12%)
Query: 42 TSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRLLLFASA 101
SP S+CPICL N SY D CLH+FCF CI +WS+ +E C + KQ F
Sbjct: 22 ASPESKCPICLDHFKNISYLDVCLHKFCFCCIHEWSKNKAE-----CPLCKQPFNSFYHT 76
Query: 102 TECLQYINVYDIMILQVNTSTFKGLFGVNIG 132
+ +D+ T G FG G
Sbjct: 77 IKSEDDYKRFDLRP------TENGSFGNMAG 101
>gi|291239097|ref|XP_002739463.1| PREDICTED: conserved hypothetical protein-like [Saccoglossus
kowalevskii]
Length = 1112
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 45/81 (55%), Gaps = 10/81 (12%)
Query: 36 SDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRL 95
SDG + SP + C ICL N+S+TD C H FCF+CI +WS++ +++ LCK S
Sbjct: 56 SDGSK--SPENNCSICLGKFENKSFTDGCFHTFCFVCIMEWSKV--KATCPLCKTS---- 107
Query: 96 LLFASATECLQYINVYDIMIL 116
F S ++ +YD L
Sbjct: 108 --FKSIIHNIKSNEMYDQYFL 126
>gi|60649510|gb|AAH90477.1| Si:ch211-145b13.4 protein [Danio rerio]
Length = 490
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 43/92 (46%), Gaps = 11/92 (11%)
Query: 42 TSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRLLLFASA 101
SP S+CPICL N SY D CLH+FCF CI +WS+ +E C + KQ F
Sbjct: 22 ASPESKCPICLDHFKNISYLDVCLHKFCFCCIHEWSKNKAE-----CPLCKQPFNSFYHT 76
Query: 102 TECLQYINVYDIMILQVNTSTFKGLFGVNIGR 133
+ +D+ T G FG G+
Sbjct: 77 IKSEDDYKRFDLR------PTENGSFGNMAGQ 102
>gi|388505322|gb|AFK40727.1| unknown [Lotus japonicus]
Length = 91
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 45/90 (50%), Gaps = 9/90 (10%)
Query: 33 EDDSDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQIS-----SESSPAL 87
EDD+ +S CPICL SY D C HEFCF CI +WS+++ S S
Sbjct: 2 EDDAAASNKCDSSSCCPICLGPFLQLSYLDKCFHEFCFNCILRWSKVAAGKHHSPPSSVK 61
Query: 88 CKMSKQRLLL----FASATECLQYINVYDI 113
C + K L+L F + CL+ I +YD
Sbjct: 62 CPLCKVWLILSFFNFLNTMICLKEIPIYDF 91
>gi|328708011|ref|XP_003243570.1| PREDICTED: hypothetical protein LOC100573331 [Acyrthosiphon
pisum]
Length = 254
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 31/43 (72%)
Query: 40 RPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSE 82
R +SP S+CPICL N SYTD+CLH FCF C+ +WS+ SE
Sbjct: 28 RSSSPESQCPICLDGFTNLSYTDSCLHSFCFECLLRWSKCRSE 70
>gi|363744833|ref|XP_424920.3| PREDICTED: E3 ubiquitin-protein ligase Topors-like [Gallus gallus]
Length = 1151
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 32/48 (66%), Gaps = 2/48 (4%)
Query: 42 TSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCK 89
SP S+CPICL +N +Y D CLH FCF C+++WS+ +E LCK
Sbjct: 187 ASPDSKCPICLDRFDNVAYLDRCLHRFCFRCVQEWSKNKAEC--PLCK 232
>gi|449266191|gb|EMC77277.1| E3 ubiquitin-protein ligase Topor, partial [Columba livia]
Length = 844
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
Query: 42 TSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKM 90
SP S+CPICL +N +Y D CLH FCF C+++WS+ +E LCK
Sbjct: 15 ASPDSKCPICLDRFDNVAYLDRCLHRFCFRCVQEWSKNKAEC--PLCKQ 61
>gi|224089456|ref|XP_002189234.1| PREDICTED: E3 ubiquitin-protein ligase Topors-like [Taeniopygia
guttata]
Length = 991
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
Query: 27 KNDNPSEDDSDGDRPT--SPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESS 84
+N N S S PT SP S+CPICL +N +Y D CLH FCF C+++WS+ +E
Sbjct: 9 ENSNFSPKASTSKLPTDASPDSKCPICLDRFDNVAYLDRCLHRFCFCCVQEWSKNKAEC- 67
Query: 85 PALCK 89
LCK
Sbjct: 68 -PLCK 71
>gi|307206358|gb|EFN84410.1| E3 ubiquitin-protein ligase Topors [Harpegnathos saltator]
Length = 837
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 58/116 (50%), Gaps = 7/116 (6%)
Query: 32 SEDDSDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMS 91
S+ + D SP C ICL L N S+TD+CLH+FCF C+ +WS+I +E LCK +
Sbjct: 27 SDSNERSDDIASPPPNCSICLGKLINTSFTDSCLHQFCFDCLVKWSKIKTEC--PLCKQT 84
Query: 92 KQRLLLFASATECL-QYINVYDIMILQVN----TSTFKGLFGVNIGRIDRLHLFTF 142
+ ++ + E QY ++ Q+ ST V +GR + + F +
Sbjct: 85 FKSIIHSVRSEEDYDQYHVPRELAQSQIPQPHVVSTLDLNLDVGVGRWEDVPRFVY 140
>gi|89273950|emb|CAJ83736.1| novel protein similar to topors [Xenopus (Silurana) tropicalis]
Length = 833
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 32/48 (66%), Gaps = 2/48 (4%)
Query: 42 TSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCK 89
SP S+CPICL +N S+ D CLH FCF CI++W++ +E LCK
Sbjct: 53 ASPDSKCPICLDRFDNVSHLDRCLHRFCFRCIQEWAKNKAEC--PLCK 98
>gi|242015109|ref|XP_002428216.1| ubiquitin-protein E3 ligase, putative [Pediculus humanus
corporis]
gi|212512777|gb|EEB15478.1| ubiquitin-protein E3 ligase, putative [Pediculus humanus
corporis]
Length = 692
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 34 DDSDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCK 89
DD S S C ICL L N+S+TD+CLH+FCF C+ QWS++ +E LCK
Sbjct: 29 DDMKSPSRDSQDSNCVICLGKLQNKSFTDSCLHQFCFQCLLQWSKVKAEC--PLCK 82
>gi|326680977|ref|XP_003201680.1| PREDICTED: hypothetical protein LOC796087 [Danio rerio]
Length = 939
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 31/48 (64%), Gaps = 2/48 (4%)
Query: 42 TSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCK 89
SP S+CPICL NN + D CLH+FCF CI +WS+ +E LCK
Sbjct: 27 ASPDSKCPICLDGFNNVASLDRCLHQFCFRCIHEWSKNKAEC--PLCK 72
>gi|301621948|ref|XP_002940310.1| PREDICTED: e3 ubiquitin-protein ligase Topors [Xenopus (Silurana)
tropicalis]
Length = 1018
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 32/48 (66%), Gaps = 2/48 (4%)
Query: 42 TSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCK 89
SP S+CPICL +N S+ D CLH FCF CI++W++ +E LCK
Sbjct: 53 ASPDSKCPICLDRFDNVSHLDRCLHRFCFRCIQEWAKNKAEC--PLCK 98
>gi|198430971|ref|XP_002129481.1| PREDICTED: similar to topoisomerase I binding,
arginine/serine-rich [Ciona intestinalis]
Length = 553
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 35/52 (67%), Gaps = 3/52 (5%)
Query: 47 RCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRLLLF 98
RCPICL N++ TDTC H FCF C+K+WS++ E LCK SK R +++
Sbjct: 36 RCPICLSPPENKAITDTCFHAFCFSCLKEWSKVKVEC--PLCK-SKFRHIIY 84
>gi|345492507|ref|XP_001600719.2| PREDICTED: hypothetical protein LOC100116176 [Nasonia
vitripennis]
Length = 809
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 33/50 (66%), Gaps = 2/50 (4%)
Query: 42 TSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMS 91
SP C ICL L N S+TD+CLH+FCF C+ QWS+I +E LCK +
Sbjct: 36 ASPPPNCSICLGHLINMSFTDSCLHQFCFSCLLQWSKIKTEC--PLCKQT 83
>gi|348534437|ref|XP_003454708.1| PREDICTED: hypothetical protein LOC100699507 [Oreochromis
niloticus]
Length = 821
Score = 55.1 bits (131), Expect = 8e-06, Method: Composition-based stats.
Identities = 24/51 (47%), Positives = 30/51 (58%), Gaps = 5/51 (9%)
Query: 43 SPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQ 93
SP S+CPICL NN ++ D C H FCF CI++WS E C + KQ
Sbjct: 114 SPDSKCPICLDRFNNLAFLDRCKHRFCFPCIQEWSHKKPE-----CPLCKQ 159
>gi|395514494|ref|XP_003761452.1| PREDICTED: E3 ubiquitin-protein ligase Topors [Sarcophilus
harrisii]
Length = 994
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 42 TSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRLL 96
SP S+CPICL +N +Y CLH+FCF C+++WS+ +E LCK Q +
Sbjct: 31 ASPDSKCPICLDKFDNVAYLGHCLHKFCFRCVQEWSKNKAEC--PLCKQPFQSIF 83
>gi|193582441|ref|XP_001944782.1| PREDICTED: e3 ubiquitin-protein ligase Topors-like [Acyrthosiphon
pisum]
Length = 540
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 57/108 (52%), Gaps = 7/108 (6%)
Query: 38 GDRPT---SPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQR 94
+RPT SP S C ICL L N+ YT++C H FCF C+++WS +SE++ LCK S
Sbjct: 36 NNRPTGCSSPDSHCSICLDDLTNKCYTNSCWHLFCFECLQRWS--NSEATCPLCKKSFNS 93
Query: 95 LLLFASATECLQYINVYDIMILQVNTSTFKGL--FGVNIGRIDRLHLF 140
+ T + NV + + + + V+I R+ R+++F
Sbjct: 94 IYHSFDNTGFHETYNVPTLANMLTPRIYIRPMSDLAVDIDRMFRMNMF 141
>gi|321472164|gb|EFX83135.1| hypothetical protein DAPPUDRAFT_302122 [Daphnia pulex]
Length = 489
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 32/48 (66%), Gaps = 2/48 (4%)
Query: 42 TSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCK 89
+SP S C ICL N+S+T+ CLHEFCF C+ +WS++ E LCK
Sbjct: 41 SSPDSSCSICLGRHENKSFTNNCLHEFCFTCLLEWSKVKPEC--PLCK 86
>gi|6729035|gb|AAF27031.1|AC009177_21 unknown protein [Arabidopsis thaliana]
Length = 284
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 45/94 (47%), Gaps = 19/94 (20%)
Query: 22 ASKKQKNDNPSEDDSDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISS 81
A+K+ + S DD P CPICL SY DTC H+FCF CIKQW ++ S
Sbjct: 2 AAKEIAGGSGSIDDGSDFDP------CPICLGQFLRESYLDTCFHKFCFNCIKQWIKVVS 55
Query: 82 ESSPALCKMSKQR-------LLLFASATECLQYI 108
K SKQR LL +A C Q++
Sbjct: 56 S------KASKQRSSVTCPLCLLLGNALFCSQHL 83
>gi|270011222|gb|EFA07670.1| hypothetical protein TcasGA2_TC030677, partial [Tribolium
castaneum]
Length = 332
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 8/76 (10%)
Query: 42 TSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRLLLFASA 101
SP C ICL N+ ++C+HEFC+ C+ +WS+I +E C + KQ F S
Sbjct: 14 ASPPPHCAICLGTCKNKCRANSCMHEFCYSCLLEWSRIKAE-----CPLCKQE---FKSI 65
Query: 102 TECLQYINVYDIMILQ 117
++ +N YD+ I++
Sbjct: 66 LHNIKSLNEYDVHIVE 81
>gi|260815661|ref|XP_002602591.1| hypothetical protein BRAFLDRAFT_147665 [Branchiostoma floridae]
gi|229287902|gb|EEN58603.1| hypothetical protein BRAFLDRAFT_147665 [Branchiostoma floridae]
Length = 262
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Query: 43 SPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRLL 96
SP C ICL N+++TD C H FC+ CIK+WS++ +++ LCK Q ++
Sbjct: 14 SPDRNCSICLQQFQNKAFTDNCFHSFCYACIKEWSKV--KATCPLCKTDFQSII 65
>gi|340380362|ref|XP_003388691.1| PREDICTED: hypothetical protein LOC100633818 [Amphimedon
queenslandica]
Length = 677
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 36/50 (72%), Gaps = 2/50 (4%)
Query: 47 RCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRLL 96
+CPICL +N+++ + C H FC++CI QWS++S++ +CK+S + L+
Sbjct: 28 KCPICLEDYDNKAFVNVCFHAFCYVCIVQWSEVSNKC--PMCKVSFKSLI 75
>gi|328706608|ref|XP_003243146.1| PREDICTED: e3 ubiquitin-protein ligase Topors-like [Acyrthosiphon
pisum]
Length = 437
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 53/114 (46%), Gaps = 6/114 (5%)
Query: 40 RPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWS----QISSESSPALCKMSKQRL 95
RP++P +C ICL L N+ YT+ C+H FCF C++ WS Q S S P C + KQ
Sbjct: 11 RPSTPDPQCSICLNELTNKCYTNVCVHLFCFDCLQWWSNTCLQRCSSSEPT-CPLCKQTF 69
Query: 96 LLFASATECLQYINVYDIMIL-QVNTSTFKGLFGVNIGRIDRLHLFTFGHFQSR 148
+ + Y + I+ +T T NI R+ + + GH R
Sbjct: 70 RYIYHSIDDKGAFETYTVPIVTSPSTVTDVSEQVANINRMIIQSILSMGHRPQR 123
>gi|194881250|ref|XP_001974761.1| GG21938 [Drosophila erecta]
gi|190657948|gb|EDV55161.1| GG21938 [Drosophila erecta]
Length = 1059
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 37/62 (59%), Gaps = 6/62 (9%)
Query: 32 SEDDSDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMS 91
+E++ +R +SP C ICL + +TD+C+H+FCF C+ +WS+I E C +
Sbjct: 87 TEENGSAER-SSPPPNCAICLSRCRRKCFTDSCMHQFCFKCLCEWSKIKPE-----CPLC 140
Query: 92 KQ 93
KQ
Sbjct: 141 KQ 142
>gi|195487260|ref|XP_002091834.1| GE12014 [Drosophila yakuba]
gi|194177935|gb|EDW91546.1| GE12014 [Drosophila yakuba]
Length = 1068
Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 37/62 (59%), Gaps = 6/62 (9%)
Query: 32 SEDDSDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMS 91
+E++ +R +SP C ICL + +TD+C+H+FCF C+ +WS+I E C +
Sbjct: 88 TEENGTAER-SSPPPNCAICLSRCKRKCFTDSCMHQFCFRCLCEWSKIKPE-----CPLC 141
Query: 92 KQ 93
KQ
Sbjct: 142 KQ 143
>gi|30679440|ref|NP_187176.2| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|26450611|dbj|BAC42417.1| unknown protein [Arabidopsis thaliana]
gi|31711722|gb|AAP68217.1| At3g05250 [Arabidopsis thaliana]
gi|70905075|gb|AAZ14063.1| At3g05250 [Arabidopsis thaliana]
gi|332640690|gb|AEE74211.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 278
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 45/93 (48%), Gaps = 14/93 (15%)
Query: 22 ASKKQKNDNPSEDDSDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISS 81
A+K+ + S DD P CPICL SY DTC H+FCF CIKQW ++ S
Sbjct: 2 AAKEIAGGSGSIDDGSDFDP------CPICLGQFLRESYLDTCFHKFCFNCIKQWIKVVS 55
Query: 82 ESSPALCKMSKQRLLLFAS--ATECLQYINVYD 112
K SKQR + TE L I+ YD
Sbjct: 56 S------KASKQRSSVTCPLCKTENLSIIHNYD 82
>gi|328702268|ref|XP_003241856.1| PREDICTED: e3 ubiquitin-protein ligase Topors-like [Acyrthosiphon
pisum]
Length = 415
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 32/50 (64%), Gaps = 2/50 (4%)
Query: 40 RPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCK 89
RP +P SRC IC + N+ YT+ CLH FCF C+ +WS SE + LCK
Sbjct: 12 RPLTPDSRCSICFDDVTNKCYTNACLHLFCFECLLRWSY--SEPTCPLCK 59
>gi|195335760|ref|XP_002034531.1| GM21927 [Drosophila sechellia]
gi|194126501|gb|EDW48544.1| GM21927 [Drosophila sechellia]
Length = 1048
Score = 53.1 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 31/52 (59%), Gaps = 5/52 (9%)
Query: 42 TSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQ 93
TSP C ICL + +TD+C+H+FCF C+ +WS+I E C + KQ
Sbjct: 96 TSPPPNCAICLSRCRRKCFTDSCMHQFCFKCLCEWSKIKPE-----CPLCKQ 142
>gi|194757856|ref|XP_001961178.1| GF11128 [Drosophila ananassae]
gi|190622476|gb|EDV38000.1| GF11128 [Drosophila ananassae]
Length = 1076
Score = 53.1 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 42 TSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRLLLFASA 101
+SP C ICL + +TD+C+H+FCF C+ +WS+I E C + KQ F +
Sbjct: 82 SSPPPNCAICLSRCRRKCFTDSCMHQFCFKCLCEWSKIKPE-----CPLCKQP---FKTI 133
Query: 102 TECLQYINVYDIMILQVNTSTFK 124
++ ++ YD +Q + + +
Sbjct: 134 IHNVRTLDDYDRYPVQTTSPSMQ 156
>gi|195120702|ref|XP_002004860.1| GI19365 [Drosophila mojavensis]
gi|193909928|gb|EDW08795.1| GI19365 [Drosophila mojavensis]
Length = 1101
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 8/79 (10%)
Query: 42 TSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRLLLFASA 101
+SP C ICL + +TD+C+H+FCF C+ +WS+I +E C + KQ F +
Sbjct: 97 SSPPPNCAICLSRCRRKCFTDSCMHQFCFKCLCEWSKIKAE-----CPLCKQ---PFKTI 148
Query: 102 TECLQYINVYDIMILQVNT 120
++ ++ YD +Q NT
Sbjct: 149 IHNVRTLDDYDRYPVQSNT 167
>gi|326433423|gb|EGD78993.1| hypothetical protein PTSG_01964 [Salpingoeca sp. ATCC 50818]
Length = 663
Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/63 (42%), Positives = 35/63 (55%), Gaps = 6/63 (9%)
Query: 27 KNDNPSEDDSDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPA 86
K+ + E D+ GD S CPICL LN+++ D C H FCF CI W + S + P
Sbjct: 118 KDPDGDEQDAHGDEQES----CPICLDALNDKALLDGCFHSFCFECIMSWLNV-SRTCP- 171
Query: 87 LCK 89
LCK
Sbjct: 172 LCK 174
>gi|157119515|ref|XP_001653408.1| hypothetical protein AaeL_AAEL008683 [Aedes aegypti]
gi|108875296|gb|EAT39521.1| AAEL008683-PA [Aedes aegypti]
Length = 997
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 7/78 (8%)
Query: 19 IQQASKKQKNDNPSEDDSDGDRP-----TSPTSRCPICLLVLNNRSYTDTCLHEFCFLCI 73
+ +S ++ DN D+ GD +SP +C ICL + YTD+C H+FC+ C+
Sbjct: 31 LDSSSSAEELDNSCSGDAAGDDAGESGRSSPPPKCAICLGKCRQKCYTDSCRHQFCYRCL 90
Query: 74 KQWSQISSESSPALCKMS 91
+WS+I +E LCK +
Sbjct: 91 LEWSKIKAEC--PLCKQA 106
>gi|449514026|ref|XP_002189201.2| PREDICTED: E3 ubiquitin-protein ligase Topors-like [Taeniopygia
guttata]
Length = 741
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Query: 44 PTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCK 89
P S+CPICL +N +Y + CLH FCF CI++W + +E LCK
Sbjct: 44 PNSKCPICLDRFDNVAYLNHCLHRFCFCCIQEWPKNKAEC--PLCK 87
>gi|118104461|ref|XP_001232984.1| PREDICTED: E3 ubiquitin-protein ligase Topors-like [Gallus
gallus]
Length = 520
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Query: 42 TSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKM 90
TSP S+CPICL +N +Y D C H FCF C++ S+ +E LCK+
Sbjct: 5 TSPDSKCPICLDRFDNIAYLDNCWHRFCFRCVQDRSKTKAEC--PLCKL 51
>gi|241618045|ref|XP_002408287.1| conserved hypothetical protein [Ixodes scapularis]
gi|215502954|gb|EEC12448.1| conserved hypothetical protein [Ixodes scapularis]
Length = 645
Score = 52.0 bits (123), Expect = 9e-05, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 8/83 (9%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRLLLFASATECLQY 107
C ICL N+S+TD+C H FCF C+ +W+++ E C + KQR F S ++
Sbjct: 54 CAICLGKPENKSFTDSCFHTFCFGCLAEWAKLKPE-----CPLCKQR---FKSIIHSVRS 105
Query: 108 INVYDIMILQVNTSTFKGLFGVN 130
+ YD L + L+ +
Sbjct: 106 LEDYDQYFLSEEQHRTRSLYSTS 128
>gi|330844129|ref|XP_003293988.1| hypothetical protein DICPUDRAFT_158926 [Dictyostelium purpureum]
gi|325075614|gb|EGC29479.1| hypothetical protein DICPUDRAFT_158926 [Dictyostelium purpureum]
Length = 483
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 31/48 (64%), Gaps = 2/48 (4%)
Query: 42 TSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCK 89
S S CPICL ++ ++ D C H+FCFLCI QWS+++ + LCK
Sbjct: 68 VSEDSTCPICLGPFDDLTFLDICFHQFCFLCILQWSEVNQKC--PLCK 113
>gi|170030942|ref|XP_001843346.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167868826|gb|EDS32209.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 755
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 38/64 (59%), Gaps = 7/64 (10%)
Query: 42 TSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQ--RLLLFA 99
+SP +C ICL + YTD+C H+FC+ C+ +WS+I +E C + KQ R +++
Sbjct: 59 SSPPPKCAICLGKCRQKCYTDSCRHQFCYRCLLEWSKIKAE-----CPLCKQVFRSIIYD 113
Query: 100 SATE 103
TE
Sbjct: 114 QKTE 117
>gi|345312589|ref|XP_001520205.2| PREDICTED: E3 ubiquitin-protein ligase Topors [Ornithorhynchus
anatinus]
Length = 955
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 30/48 (62%), Gaps = 3/48 (6%)
Query: 42 TSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCK 89
TSP +CPICL N +Y D C H FCF C+++WS+ +E LCK
Sbjct: 87 TSP-DKCPICLDGFENMAYLDLCFHRFCFRCVQEWSKNKAEC--PLCK 131
>gi|297829048|ref|XP_002882406.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297328246|gb|EFH58665.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 273
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 38/67 (56%), Gaps = 7/67 (10%)
Query: 22 ASKKQKNDNPSEDDSDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQ-IS 80
A+K+ + S DD P CPICL + SY DTC H+FCF CIKQW + +S
Sbjct: 2 AAKEIAGGSGSIDDGSDFDP------CPICLGPFLHDSYLDTCFHKFCFNCIKQWIKVVS 55
Query: 81 SESSPAL 87
S++S L
Sbjct: 56 SKASKQL 62
>gi|296088311|emb|CBI36756.3| unnamed protein product [Vitis vinifera]
Length = 299
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 30 NPSEDDSDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCK 89
N S+D S D P+ + CPICL + SY D C H+FC+ CI +W+++ + C+
Sbjct: 31 NQSKDTSCNDSPSEGPNPCPICLGPVVKDSYLDQCFHKFCYDCIVRWTKVVASKH---CR 87
Query: 90 MSKQRLLLFASATECLQYINVYD 112
+S F TE ++ YD
Sbjct: 88 LSSTIKCPFCK-TENFSIVHGYD 109
>gi|2605922|gb|AAB84205.1| ring finger protein [Brevicoryne brassicae]
Length = 133
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 36/50 (72%), Gaps = 2/50 (4%)
Query: 40 RPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCK 89
RP++P ++C ICL L N+ ++DTC H FCF C+ +WS +S+++ LCK
Sbjct: 42 RPSTPDTQCSICLDDLTNKCHSDTCWHLFCFDCLVRWS--NSQATCPLCK 89
>gi|20130141|ref|NP_611388.1| topoisomerase I-interacting protein, isoform A [Drosophila
melanogaster]
gi|442624184|ref|NP_001261083.1| topoisomerase I-interacting protein, isoform B [Drosophila
melanogaster]
gi|74867784|sp|Q9V8P9.1|TOPRS_DROME RecName: Full=E3 ubiquitin-protein ligase Topors; AltName:
Full=SUMO1-protein E3 ligase Topors; AltName:
Full=Topoisomerase I-binding RING finger protein;
AltName: Full=Topoisomerase I-binding
arginine/serine-rich protein; AltName: Full=dTopors
gi|7302531|gb|AAF57614.1| topoisomerase I-interacting protein, isoform A [Drosophila
melanogaster]
gi|21483446|gb|AAM52698.1| LD43109p [Drosophila melanogaster]
gi|440214516|gb|AGB93615.1| topoisomerase I-interacting protein, isoform B [Drosophila
melanogaster]
Length = 1038
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 5/51 (9%)
Query: 43 SPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQ 93
SP C ICL + +TD+C+H+FCF C+ +WS+I E C + KQ
Sbjct: 97 SPPPNCAICLSRCRRKCFTDSCMHQFCFKCLCEWSKIKPE-----CPLCKQ 142
>gi|198457480|ref|XP_001360685.2| GA13494 [Drosophila pseudoobscura pseudoobscura]
gi|198135996|gb|EAL25260.2| GA13494 [Drosophila pseudoobscura pseudoobscura]
Length = 1102
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 23 SKKQKNDNPSEDDSDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSE 82
+ N P S R TSP C ICL + +TD+C+H+FCF C+ +WS++ +E
Sbjct: 75 ANSNGNGEPGTSASGSGR-TSPPPNCAICLSRCKRKCFTDSCMHQFCFKCLCEWSKVKAE 133
Query: 83 SSPALCKMSKQRLLLFASATECLQYINVYDI 113
C + KQ L + Y +
Sbjct: 134 -----CPLCKQPFKTIIHNVRTLDDFDSYPV 159
>gi|195150691|ref|XP_002016284.1| GL11500 [Drosophila persimilis]
gi|194110131|gb|EDW32174.1| GL11500 [Drosophila persimilis]
Length = 868
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 6/71 (8%)
Query: 23 SKKQKNDNPSEDDSDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSE 82
+ N P S R TSP C ICL + +TD+C+H+FCF C+ +WS++ +E
Sbjct: 75 ANSNGNGEPGTSASGSGR-TSPPPNCAICLSRCKRKCFTDSCMHQFCFKCLCEWSKVKAE 133
Query: 83 SSPALCKMSKQ 93
C + KQ
Sbjct: 134 -----CPLCKQ 139
>gi|359487787|ref|XP_002280880.2| PREDICTED: uncharacterized protein LOC100254480 [Vitis vinifera]
Length = 271
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 30 NPSEDDSDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCK 89
N S+D S D P+ + CPICL + SY D C H+FC+ CI +W+++ + C+
Sbjct: 3 NQSKDTSCNDSPSEGPNPCPICLGPVVKDSYLDQCFHKFCYDCIVRWTKVVASKH---CR 59
Query: 90 MSKQRLLLFASATECLQYINVYD 112
+S F TE ++ YD
Sbjct: 60 LSSTIKCPFCK-TENFSIVHGYD 81
>gi|195384467|ref|XP_002050939.1| GJ19922 [Drosophila virilis]
gi|194145736|gb|EDW62132.1| GJ19922 [Drosophila virilis]
Length = 1047
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 10/94 (10%)
Query: 42 TSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRLLLFASA 101
+SP C ICL + +TD+C+H+FCF C+ +WS+I E C + KQ F +
Sbjct: 89 SSPPPNCAICLSRCRRKCFTDSCMHQFCFKCLCEWSKIKPE-----CPLCKQ---PFKTI 140
Query: 102 TECLQYINVYDIMILQVNTSTFKGL--FGVNIGR 133
++ ++ YD +Q +T L VNI R
Sbjct: 141 IHNVRTLDDYDRYPVQSSTPEHSALSFHIVNIRR 174
>gi|281201931|gb|EFA76139.1| RING zinc finger-containing protein [Polysphondylium pallidum
PN500]
Length = 467
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 47 RCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRLL 96
CPICL + + ++ D C H FC++CI QWS+IS LCK + Q L+
Sbjct: 68 HCPICLSEIEDITFLDICFHHFCYICILQWSEISGNC--PLCKSNFQSLI 115
>gi|195584770|ref|XP_002082177.1| GD11423 [Drosophila simulans]
gi|194194186|gb|EDX07762.1| GD11423 [Drosophila simulans]
Length = 868
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 8/79 (10%)
Query: 42 TSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRLLLFASA 101
TSP C ICL + +TD+C+H+FCF C+ +WS+I E C + KQ F +
Sbjct: 96 TSPPPNCAICLSRCRRKCFTDSCMHQFCFKCLCEWSKIKPE-----CPLCKQ---PFRTI 147
Query: 102 TECLQYINVYDIMILQVNT 120
++ ++ YD +Q +
Sbjct: 148 IHNVRTLDDYDRYPVQTTS 166
>gi|158294854|ref|XP_315856.4| AGAP005831-PA [Anopheles gambiae str. PEST]
gi|157015758|gb|EAA11563.4| AGAP005831-PA [Anopheles gambiae str. PEST]
Length = 1258
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 9/73 (12%)
Query: 36 SDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRL 95
+DG R SP +C ICL ++ ++C H+FCF C+ +WS++ E C + KQR
Sbjct: 40 ADGRR--SPPPKCAICLGKCRQPAFANSCKHQFCFRCLLEWSKVKPE-----CPLCKQRF 92
Query: 96 L--LFASATECLQ 106
L ++ + +C +
Sbjct: 93 LSIVYYKSIDCFE 105
>gi|405122925|gb|AFR97690.1| hypothetical protein CNAG_01483 [Cryptococcus neoformans var.
grubii H99]
Length = 761
Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 7/87 (8%)
Query: 1 MAESLFRQTQKRRLELPEIQQASKKQKNDNPSED-----DSDGDRPTSPTSRCPICLLVL 55
+ ES +R +KR E E ++ +++ D D GD RC ICL+ L
Sbjct: 15 LDESYYRSFKKR--EAREREKGKRREDQDGSEMDVMGKETQVGDGDDGDEERCIICLMGL 72
Query: 56 NNRSYTDTCLHEFCFLCIKQWSQISSE 82
+R+ C HEFCF CI WS S +
Sbjct: 73 RDRTIVGVCGHEFCFECISIWSNQSRK 99
>gi|449525896|ref|XP_004169952.1| PREDICTED: uncharacterized protein LOC101225414 [Cucumis sativus]
Length = 274
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%)
Query: 45 TSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISS 81
T+ CPICL +N SY D C H FC+ CI QW+++ S
Sbjct: 21 TNPCPICLGPINQSSYLDKCFHNFCYNCIVQWTKVVS 57
>gi|449442835|ref|XP_004139186.1| PREDICTED: E3 ubiquitin-protein ligase Topors-like [Cucumis
sativus]
Length = 274
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%)
Query: 45 TSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISS 81
T+ CPICL +N SY D C H FC+ CI QW+++ S
Sbjct: 21 TNPCPICLGPINQSSYLDKCFHNFCYNCIVQWTKVVS 57
>gi|195029977|ref|XP_001987848.1| GH22136 [Drosophila grimshawi]
gi|193903848|gb|EDW02715.1| GH22136 [Drosophila grimshawi]
Length = 1077
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Query: 42 TSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRLLLFASA 101
+SP C ICL + +TD+C+H+FCF C+ +WS+I E C + KQ
Sbjct: 93 SSPPPNCAICLSRCRRKCFTDSCMHQFCFKCLCEWSKIKPE-----CPLCKQPFKTIIHN 147
Query: 102 TECLQYINVYDI 113
LQ + Y +
Sbjct: 148 VRTLQDYDRYPV 159
>gi|449275108|gb|EMC84081.1| E3 ubiquitin-protein ligase Topor [Columba livia]
Length = 353
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
Query: 47 RCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRL 95
RCPICL SY CLH+FC+ CI +W+Q E C + K+R+
Sbjct: 81 RCPICLDSWEEASYVMPCLHQFCYTCILRWAQSKPE-----CPLCKRRI 124
>gi|449266091|gb|EMC77207.1| E3 ubiquitin-protein ligase Topor [Columba livia]
Length = 369
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 29/50 (58%), Gaps = 5/50 (10%)
Query: 46 SRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRL 95
+RCPICL SY CLH+FC+ CI +W+Q E C + K+R+
Sbjct: 43 NRCPICLDSWEEASYVMPCLHQFCYTCILRWAQSKPE-----CPLCKRRI 87
>gi|28558788|gb|AAO45759.1| RING zinc finger protein-like protein [Cucumis melo subsp. melo]
Length = 210
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 24/37 (64%)
Query: 45 TSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISS 81
T CPICL +N SY D C H FC+ CI QW+++ S
Sbjct: 13 TDPCPICLGPINQSSYLDKCFHNFCYNCIVQWTKVVS 49
>gi|327263737|ref|XP_003216674.1| PREDICTED: e3 ubiquitin-protein ligase Topors-like [Anolis
carolinensis]
Length = 598
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 29/53 (54%), Gaps = 5/53 (9%)
Query: 46 SRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRLLLF 98
SRCPICL + N ++ + C H FCF CI +WS +E C + KQ F
Sbjct: 39 SRCPICLEKIQNVAFLNPCFHRFCFACILEWSDRKAE-----CPLCKQHFNSF 86
>gi|224131020|ref|XP_002328433.1| predicted protein [Populus trichocarpa]
gi|222838148|gb|EEE76513.1| predicted protein [Populus trichocarpa]
Length = 271
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%)
Query: 42 TSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQI 79
+S ++ CPICL SY DTC H+FC+ CI QW+++
Sbjct: 17 SSDSNPCPICLAPFLQESYLDTCFHKFCYKCILQWTKV 54
>gi|357441629|ref|XP_003591092.1| E3 ubiquitin-protein ligase Topors [Medicago truncatula]
gi|355480140|gb|AES61343.1| E3 ubiquitin-protein ligase Topors [Medicago truncatula]
Length = 300
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 28/47 (59%)
Query: 35 DSDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISS 81
+++ P S S CPICL SY D CLH+FCF CI +W ++ S
Sbjct: 2 ENESSAPNSHDSICPICLGPFIQPSYLDHCLHQFCFNCILRWIKVVS 48
>gi|145548577|ref|XP_001459969.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124427796|emb|CAK92572.1| unnamed protein product [Paramecium tetraurelia]
Length = 114
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 27/39 (69%)
Query: 44 PTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSE 82
P RC ICL +++N+ + D C H FCF CI++WS+ S +
Sbjct: 8 PEMRCVICLNLMSNQVFMDQCNHSFCFECIRKWSEKSHQ 46
>gi|449282886|gb|EMC89621.1| E3 ubiquitin-protein ligase Topor [Columba livia]
Length = 498
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 7/66 (10%)
Query: 30 NPSEDDSDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCK 89
NP ED + +RC ICL SY CLH+FC+ CI +W +ES P C
Sbjct: 157 NPPEDTET--MASGLDTRCAICLESWEEASYVMPCLHQFCYPCIVRW----TESKPE-CP 209
Query: 90 MSKQRL 95
+ K+R+
Sbjct: 210 LCKRRV 215
>gi|66813380|ref|XP_640869.1| RING zinc finger-containing protein [Dictyostelium discoideum AX4]
gi|60468888|gb|EAL66888.1| RING zinc finger-containing protein [Dictyostelium discoideum AX4]
Length = 548
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 46 SRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRLL 96
S C ICL N ++ D C H+FCF+CI QWS+++ LCK L+
Sbjct: 98 STCSICLSPFENLTFLDICFHQFCFVCILQWSELNQRC--PLCKSEYHSLI 146
>gi|449669603|ref|XP_002166956.2| PREDICTED: uncharacterized protein LOC100207129 [Hydra
magnipapillata]
Length = 841
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 46/97 (47%), Gaps = 11/97 (11%)
Query: 11 KRRLELPEIQQASKKQKNDNPSEDDSDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCF 70
KRR + IQ+ +Q +P +D S C +CL NRS+ C H FC
Sbjct: 485 KRRSKQKVIQEELSRQTTKSPGREDM-------KDSICSVCLGPFENRSFLLECFHSFCH 537
Query: 71 LCIKQWSQISSESSPALCKMSKQRLLLFASATECLQY 107
+CI QWS++S + LCK + L+ S L+Y
Sbjct: 538 ICIIQWSELS--RTCPLCKTKYKSLI--HSVNSDLEY 570
>gi|302765665|ref|XP_002966253.1| hypothetical protein SELMODRAFT_407641 [Selaginella moellendorffii]
gi|300165673|gb|EFJ32280.1| hypothetical protein SELMODRAFT_407641 [Selaginella moellendorffii]
Length = 236
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 32/67 (47%), Gaps = 8/67 (11%)
Query: 39 DRPTSPT---SRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRL 95
D PTS T S C IC R D C H FCF CI +WS++ S C M KQR
Sbjct: 55 DEPTSATAGASACGICFTDDRERGKLDCCDHFFCFGCIVEWSKLESR-----CPMCKQRF 109
Query: 96 LLFASAT 102
+ +T
Sbjct: 110 MTIVRST 116
>gi|302801135|ref|XP_002982324.1| hypothetical protein SELMODRAFT_421816 [Selaginella moellendorffii]
gi|300149916|gb|EFJ16569.1| hypothetical protein SELMODRAFT_421816 [Selaginella moellendorffii]
Length = 236
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 32/67 (47%), Gaps = 8/67 (11%)
Query: 39 DRPTSPT---SRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRL 95
D PTS T S C IC R D C H FCF CI +WS++ S C M KQR
Sbjct: 55 DEPTSATAGASACGICFTDDRERGKLDCCDHFFCFGCIVEWSKLESR-----CPMCKQRF 109
Query: 96 LLFASAT 102
+ +T
Sbjct: 110 MTIVRST 116
>gi|297742352|emb|CBI34501.3| unnamed protein product [Vitis vinifera]
Length = 1223
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 32/64 (50%)
Query: 18 EIQQASKKQKNDNPSEDDSDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWS 77
E++ + D+ E D D D +C IC+ ++ +R D C H FCF CI W+
Sbjct: 2 EVEVFTNDMAEDDSYEVDEDIDASGLEGEKCGICMDIIIDRGVLDCCQHWFCFACIDNWA 61
Query: 78 QISS 81
I++
Sbjct: 62 TITN 65
>gi|147805924|emb|CAN74396.1| hypothetical protein VITISV_011762 [Vitis vinifera]
Length = 1328
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 32/64 (50%)
Query: 18 EIQQASKKQKNDNPSEDDSDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWS 77
E++ + D+ E D D D +C IC+ ++ +R D C H FCF CI W+
Sbjct: 2 EVEVFTNDMAEDDSYEVDEDIDASGLEGEKCGICMDIIIDRGVLDCCQHWFCFACIDNWA 61
Query: 78 QISS 81
I++
Sbjct: 62 TITN 65
>gi|225426296|ref|XP_002265315.1| PREDICTED: uncharacterized protein LOC100254675 [Vitis vinifera]
Length = 1304
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 32/64 (50%)
Query: 18 EIQQASKKQKNDNPSEDDSDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWS 77
E++ + D+ E D D D +C IC+ ++ +R D C H FCF CI W+
Sbjct: 2 EVEVFTNDMAEDDSYEVDEDIDASGLEGEKCGICMDIIIDRGVLDCCQHWFCFACIDNWA 61
Query: 78 QISS 81
I++
Sbjct: 62 TITN 65
>gi|270339500|ref|YP_003331582.1| ubiquitin E3 ligase ICP0 [Felid herpesvirus 1]
gi|2502079|gb|AAB80763.1| ubiquitin E3 ligase ICP0 [Felid herpesvirus 1]
Length = 498
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRLL 96
CPICL +N+ ++T CLH+FC+ C+ +W ++++ LCK S L+
Sbjct: 8 CPICLDPMNDLTFTMPCLHKFCYSCLSRWVGLNNKC--PLCKTSVTSLI 54
>gi|225450657|ref|XP_002278421.1| PREDICTED: uncharacterized protein LOC100240780 [Vitis vinifera]
Length = 733
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 8/71 (11%)
Query: 48 CPICLLVLNNR---SYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRLLLFASATEC 104
C ICL R D C H FCF CI +WS++ S C + KQR + +
Sbjct: 257 CGICLSEEGKRRVRGTLDCCSHYFCFGCIMEWSKVESR-----CPLCKQRFMTISKPARA 311
Query: 105 LQYINVYDIMI 115
I++ D+MI
Sbjct: 312 NTGIDLRDVMI 322
>gi|449276118|gb|EMC84792.1| E3 ubiquitin-protein ligase Topor [Columba livia]
Length = 662
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRLL 96
CP+C SY CLH FC+ CI QW +ES P C + K+R+L
Sbjct: 334 CPVCQDSWEEASYVTPCLHRFCYPCILQW----AESKPE-CPLCKRRIL 377
>gi|296316062|ref|YP_003662526.1| ubiquitin E3 ligase ICP0 [Bovine herpesvirus 5]
gi|40456187|gb|AAR86165.1| BICP0 immediate-early transactivator protein with zinc finger
[Bovine herpesvirus 5]
Length = 720
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRLLLFASATECLQY 107
C ICL V+ + CLH FC CI++W + + LCK + L+ ++ EC +
Sbjct: 21 CCICLDVITGAARALPCLHAFCLACIRRW--LEGRPTCPLCKAPVRSLIHSVASDECFEE 78
Query: 108 INVY 111
I V+
Sbjct: 79 IPVW 82
>gi|118103889|ref|XP_430486.2| PREDICTED: E3 ubiquitin-protein ligase Topors-like [Gallus gallus]
Length = 194
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 21/86 (24%)
Query: 18 EIQQASKKQKNDNPSEDDSDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWS 77
++QQA Q DN RCPICL + + ++ TC H FCF CI QW+
Sbjct: 22 QLQQAGPCQAADN----------------RCPICLDAICHAAHVPTCFHCFCFSCIWQWA 65
Query: 78 QISSESSPALCKMSKQRLLLFASATE 103
++ A+C + +Q AT+
Sbjct: 66 -----ANNAVCPVCRQPFDRILCATQ 86
>gi|255537833|ref|XP_002509983.1| hypothetical protein RCOM_1692360 [Ricinus communis]
gi|223549882|gb|EEF51370.1| hypothetical protein RCOM_1692360 [Ricinus communis]
Length = 454
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 26/47 (55%)
Query: 35 DSDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISS 81
D+D D RC IC+ ++ +R D C H FCF CI W+ I++
Sbjct: 17 DADNDYSNFEGERCGICMDIVFDRGVLDCCQHWFCFTCIDNWATITN 63
>gi|440802519|gb|ELR23448.1| zinc finger domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 1561
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 21 QASKKQKNDNPSEDDSDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQIS 80
+++ + N + + +GD + T C IC + R D+C H FCF CI +WS+++
Sbjct: 103 HGNEQVEEKNKTAQEGEGDEEKNNT--CGICFEEVKERGVLDSCRHAFCFDCIHRWSKVA 160
Query: 81 SESSPALCKMS 91
+S +CK +
Sbjct: 161 --NSCPMCKAA 169
>gi|328869841|gb|EGG18216.1| RING zinc finger-containing protein [Dictyostelium fasciculatum]
Length = 460
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 47 RCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQIS 80
+C ICL V+++ ++ D C H FC+ CI QWS +S
Sbjct: 65 KCSICLGVVDDITFLDICFHHFCYHCILQWSDLS 98
>gi|449267324|gb|EMC78281.1| E3 ubiquitin-protein ligase Topor [Columba livia]
Length = 334
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 5/50 (10%)
Query: 46 SRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRL 95
+RC ICL SY CLH+FC+ CI +W++ E C + K+R+
Sbjct: 7 TRCAICLESWEEASYVMPCLHQFCYPCIVRWTESKPE-----CPLCKRRV 51
>gi|255542600|ref|XP_002512363.1| protein binding protein, putative [Ricinus communis]
gi|223548324|gb|EEF49815.1| protein binding protein, putative [Ricinus communis]
Length = 276
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 10/73 (13%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCIKQWSQI--SSESSPA-------LCKMSKQRLLL- 97
CPICL SY DTC H+FC+ CI W+++ SP+ LCK ++
Sbjct: 24 CPICLGPFIQESYLDTCFHKFCYNCILHWTKVIGRKRHSPSPSSVKCPLCKTENHSIIYG 83
Query: 98 FASATECLQYINV 110
F ++ Y NV
Sbjct: 84 FDGSSFQRHYTNV 96
>gi|301606472|ref|XP_002932852.1| PREDICTED: hypothetical protein LOC100486670 [Xenopus (Silurana)
tropicalis]
Length = 1696
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 47 RCPICLLVL-NNRSYTDTCLHEFCFLCIKQWSQISS 81
RCPICL L + +Y + C H FCF CI +WS+ S+
Sbjct: 38 RCPICLNFLRKDVAYPENCYHAFCFTCILKWSETST 73
>gi|343797209|gb|AEM64001.1| ICP0 [Suid herpesvirus 1]
gi|343797279|gb|AEM64070.1| ICP0 [Suid herpesvirus 1]
Length = 367
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRLL 96
CPICL V + T C+H+FC CI++W+Q SS + P LCK +L
Sbjct: 3 CPICLDVAATEAQTLPCMHKFCLDCIQRWTQ-SSTACP-LCKARVTSIL 49
>gi|328711766|ref|XP_001943770.2| PREDICTED: e3 ubiquitin-protein ligase Topors-like [Acyrthosiphon
pisum]
Length = 458
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 47/106 (44%), Gaps = 14/106 (13%)
Query: 19 IQQASKKQKNDNPSEDDSD-----GDRPT----SPTSRCPICLLVLNNRSYTDTCLHEFC 69
I + SK S DD + RPT +P S+C ICL L N T++CLH FC
Sbjct: 3 INRKSKPNDVVESSSDDEETISTINTRPTESSSTPDSQCSICLDELTNPCNTNSCLHLFC 62
Query: 70 FLCIKQWSQISSESSPALCKMSKQRLLLFASATECLQYINVYDIMI 115
F C+ WS S +C + ++ + + L YD+ I
Sbjct: 63 FECLLLWSN-----SAQICPLCRKTFNYIYHSFDDLGAHETYDVSI 103
>gi|385663782|gb|AFI70837.1| EP0 [Suid herpesvirus 1]
gi|386277905|gb|AFI70907.1| EP0 [Suid herpesvirus 1]
gi|386277906|gb|AFI70976.1| EP0 [Suid herpesvirus 1]
Length = 410
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRLL 96
CPICL V + T C+H+FC CI++W+Q SS + P LCK +L
Sbjct: 46 CPICLDVAATEAQTLPCMHKFCLDCIQRWTQ-SSTACP-LCKARVTSIL 92
>gi|266331|sp|P29836.1|ICP0_BHV1K RecName: Full=E3 ubiquitin-protein ligase ICP0; AltName: Full=IER
2.9/ER2.6; AltName: Full=P135 protein
gi|330768|gb|AAA46061.1| p135 protein [Bovine herpesvirus 1]
Length = 676
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRLLLFASATECLQY 107
C ICL + + CLH FC CI++W + + LCK Q L+ ++ EC +
Sbjct: 13 CCICLDAITGAARALPCLHAFCLACIRRW--LEGRPTCPLCKAPVQSLIHSVASDECFEE 70
Query: 108 INV 110
I V
Sbjct: 71 IPV 73
>gi|9629879|ref|NP_045363.1| ubiquitin E3 ligase ICP0 [Bovine herpesvirus 1]
gi|124136|sp|P29128.1|ICP0_BHV1J RecName: Full=E3 ubiquitin-protein ligase ICP0; AltName: Full=IER
2.9/ER2.6; AltName: Full=P135 protein
gi|330770|gb|AAA46062.1| p135 protein [Bovine herpesvirus 1]
gi|2653352|emb|CAA06138.1| immediate-early transactivator protein with Zn finger (cell
nucleus) [Bovine herpesvirus type 1.1]
Length = 676
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRLLLFASATECLQY 107
C ICL + + CLH FC CI++W + + LCK Q L+ ++ EC +
Sbjct: 13 CCICLDAITGAARALPCLHAFCLACIRRW--LEGRPTCPLCKAPVQSLIHSVASDECFEE 70
Query: 108 INV 110
I V
Sbjct: 71 IPV 73
>gi|410060898|gb|AFV53423.1| immediate-early transactivator protein with Zn finger (cell
nucleus) [Bovine herpesvirus type 1.1]
Length = 683
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRLLLFASATECLQY 107
C ICL + + CLH FC CI++W + + LCK Q L+ ++ EC +
Sbjct: 13 CCICLDAITGAARALPCLHAFCLACIRRW--LEGRPTCPLCKAPVQSLIHSVASDECFEE 70
Query: 108 INV 110
I V
Sbjct: 71 IPV 73
>gi|321472162|gb|EFX83133.1| hypothetical protein DAPPUDRAFT_48477 [Daphnia pulex]
Length = 173
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 10/89 (11%)
Query: 1 MAESLFRQTQKRRLELPEIQQASKKQKNDNPSEDDSDGDRPTSPTSRCPICLLVLNNRSY 60
MA + KR+ + PE K+ + +D+ +S C ICL ++ N+S+
Sbjct: 1 MASTSTVDNSKRKEKSPEESSCRKRPRLCFEEQDNE--------SSTCVICLEIITNKSF 52
Query: 61 TDTCLHEFCFLCIKQWSQISSESSPALCK 89
+ CLH FC+ C+ WS+ +E LCK
Sbjct: 53 ANNCLHTFCYECLLNWSKQKAEC--PLCK 79
>gi|449509365|ref|XP_004163568.1| PREDICTED: uncharacterized protein LOC101225850, partial [Cucumis
sativus]
Length = 248
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 5/52 (9%)
Query: 47 RCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRLLLF 98
RC IC+ V+ +R D C H FCF+CI W+ I++ LC + ++ L
Sbjct: 32 RCGICMDVIVDRGVLDCCQHWFCFVCIDNWATITN-----LCPLCQKEFQLI 78
>gi|321472173|gb|EFX83144.1| hypothetical protein DAPPUDRAFT_223527 [Daphnia pulex]
Length = 293
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 8/94 (8%)
Query: 41 PTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRLLLFAS 100
P S C ICL +RS + C HEFCF C+ QWS++ +C + Q F+S
Sbjct: 14 PESYVDPCTICLGEREDRSLPNNCFHEFCFSCLLQWSEVK-----PVCPLCVQP---FSS 65
Query: 101 ATECLQYINVYDIMILQVNTSTFKGLFGVNIGRI 134
++ + YD +++ + +N I
Sbjct: 66 IIHNIKSDHEYDEQRIEMADPALDFEYSMNYDEI 99
>gi|196011138|ref|XP_002115433.1| hypothetical protein TRIADDRAFT_59362 [Trichoplax adhaerens]
gi|190582204|gb|EDV22278.1| hypothetical protein TRIADDRAFT_59362 [Trichoplax adhaerens]
Length = 463
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 14/70 (20%)
Query: 16 LPEIQQASKKQKNDNPSEDDSDGDRPTSPTSRCPICLLVLNNRSYTDTC------LHEFC 69
+ E + ++ + + + P E++ D PT CPICL N+SY + C + FC
Sbjct: 1 MSEAEASATRSEVEVPKENEDD------PT--CPICLCPFENKSYLEKCFRILNEIDTFC 52
Query: 70 FLCIKQWSQI 79
F CI QWS++
Sbjct: 53 FYCILQWSEV 62
>gi|1754692|gb|AAB63316.1| contains a deletion of 399 base pairs as compared to ICPO protein
of the Ab4p strain of Equine herpesvirus 1, encoded by
Genbank Accession Number M86664; transcriptional
protein [Equid herpesvirus 1]
Length = 419
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query: 45 TSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRLL 96
RCPICL +N S CLH FC++CI +W I + LCK+ + ++
Sbjct: 5 AERCPICLEDPSNYSMALPCLHAFCYVCITRW--IRQNPTCPLCKVPVESVV 54
>gi|296089743|emb|CBI39562.3| unnamed protein product [Vitis vinifera]
Length = 404
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 8/71 (11%)
Query: 48 CPICLLVLNNR---SYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRLLLFASATEC 104
C ICL R D C H FCF CI +WS++ S C + KQR + +
Sbjct: 38 CGICLSEEGKRRVRGTLDCCSHYFCFGCIMEWSKVESR-----CPLCKQRFMTISKPARA 92
Query: 105 LQYINVYDIMI 115
I++ D+MI
Sbjct: 93 NTGIDLRDVMI 103
>gi|336369190|gb|EGN97532.1| hypothetical protein SERLA73DRAFT_184272 [Serpula lacrymans var.
lacrymans S7.3]
gi|336381981|gb|EGO23132.1| hypothetical protein SERLADRAFT_471874 [Serpula lacrymans var.
lacrymans S7.9]
Length = 215
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 29/56 (51%), Gaps = 7/56 (12%)
Query: 25 KQKNDNPSEDDSDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQIS 80
++K N S D D D C ICL L +R+ TC HEFCF CI WS+ S
Sbjct: 27 EEKTANSSIDSLDQDH-------CSICLQSLVDRTVIPTCAHEFCFECITIWSEQS 75
>gi|384252679|gb|EIE26155.1| hypothetical protein COCSUDRAFT_40298 [Coccomyxa subellipsoidea
C-169]
Length = 506
Score = 43.9 bits (102), Expect = 0.024, Method: Composition-based stats.
Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 14/95 (14%)
Query: 2 AESLFRQTQKRRLELPEIQQASKKQKNDNPSEDDSDGDRPTSPTSRCPICL---LVLNNR 58
A F ++ L+LP+ + D S++DS G P CPICL L ++
Sbjct: 9 ASYTFFDLAQQPLDLPQ----EPLSEVDLISDEDSQGGLPV-----CPICLGEIFDLRDK 59
Query: 59 SYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQ 93
+ +C+H FC CI +WS + + S LCK Q
Sbjct: 60 AVVISCMHVFCLACISRWSSL--KKSCPLCKSRIQ 92
>gi|449452404|ref|XP_004143949.1| PREDICTED: uncharacterized protein LOC101208477 [Cucumis sativus]
Length = 1237
Score = 43.9 bits (102), Expect = 0.025, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Query: 42 TSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRLLL 97
+ RC IC+ V+ +R D C H FCF+CI W+ I++ LC + ++ L
Sbjct: 27 SEAVERCGICMDVIVDRGVLDCCQHWFCFVCIDNWATITN-----LCPLCQKEFQL 77
>gi|216905916|ref|YP_002333544.1| ubiquitin E3 ligase ICP0 [Equid herpesvirus 9]
gi|216410070|dbj|BAH02488.1| transcriptional regulator [Equid herpesvirus 9]
Length = 533
Score = 43.5 bits (101), Expect = 0.026, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Query: 47 RCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKM 90
RCPICL +N S CLH FC++CI +W I + LCK+
Sbjct: 7 RCPICLEDPSNYSMALPCLHAFCYVCITRW--IRQNPTCPLCKV 48
>gi|58265344|ref|XP_569828.1| hypothetical protein CNC06960 [Cryptococcus neoformans var.
neoformans JEC21]
gi|134108829|ref|XP_776529.1| hypothetical protein CNBC0230 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50259209|gb|EAL21882.1| hypothetical protein CNBC0230 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57226060|gb|AAW42521.1| hypothetical protein CNC06960 [Cryptococcus neoformans var.
neoformans JEC21]
Length = 779
Score = 43.5 bits (101), Expect = 0.028, Method: Composition-based stats.
Identities = 30/89 (33%), Positives = 42/89 (47%), Gaps = 10/89 (11%)
Query: 1 MAESLFRQTQKRRLELPEIQQASKKQKNDNPSEDDSDGDRP-------TSPTSRCPICLL 53
+ ES R +KR E E ++ +++ D +E D G S RC ICL+
Sbjct: 15 LDESYHRSFKKR--EALEREKGKRREGQDG-NETDVVGKETQVGDDDDDSDEERCIICLM 71
Query: 54 VLNNRSYTDTCLHEFCFLCIKQWSQISSE 82
L +R+ C HEFCF CI WS S +
Sbjct: 72 GLRDRTIVGVCGHEFCFECISIWSNQSRK 100
>gi|13242456|ref|NP_077475.1| ubiquitin E3 ligase ICP0 [Cercopithecine herpesvirus 9]
gi|11036608|gb|AAG27237.1|AF275348_58 transactivator [Cercopithecine herpesvirus 9]
Length = 503
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 24/38 (63%)
Query: 45 TSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSE 82
T C IC+ ++ T CLH+FCF+CI+ W+ S++
Sbjct: 16 TGNCAICMSAISGLGKTLPCLHDFCFVCIQTWTSTSAQ 53
>gi|392573063|gb|EIW66205.1| hypothetical protein TREMEDRAFT_74827 [Tremella mesenterica DSM
1558]
Length = 770
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 21/34 (61%)
Query: 47 RCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQIS 80
RC ICL+ L +R+ C HEFCF CI W+ S
Sbjct: 84 RCVICLMPLRDRTIVGVCGHEFCFECIGVWANQS 117
>gi|321452884|gb|EFX64182.1| hypothetical protein DAPPUDRAFT_118446 [Daphnia pulex]
Length = 406
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 24/33 (72%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCIKQWSQIS 80
C ICL +N+S T+ C HEFCF C+ +WS+++
Sbjct: 18 CSICLEECDNKSTTNNCRHEFCFACLLEWSKMN 50
>gi|9629792|ref|NP_045280.1| ubiquitin E3 ligase ICP0 [Equid herpesvirus 4]
gi|2606010|gb|AAC59582.1| 63 [Equid herpesvirus 4]
Length = 536
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Query: 47 RCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKM 90
RCPICL +N S CLH FC++CI +W I + LCK+
Sbjct: 8 RCPICLEDPSNYSMALPCLHAFCYVCITRW--IRQNPTCPLCKV 49
>gi|61287198|dbj|BAD91104.1| transcriptional activator [Equid herpesvirus 1]
Length = 531
Score = 43.5 bits (101), Expect = 0.031, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Query: 47 RCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKM 90
RCPICL +N S CLH FC++CI +W I + LCK+
Sbjct: 7 RCPICLEDPSNYSMALPCLHAFCYVCITRW--IRQNPTCPLCKV 48
>gi|61287201|dbj|BAD91106.1| transcriptional activator [Equid herpesvirus 1]
Length = 531
Score = 43.5 bits (101), Expect = 0.031, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Query: 47 RCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKM 90
RCPICL +N S CLH FC++CI +W I + LCK+
Sbjct: 7 RCPICLEDPSNYSMALPCLHAFCYVCITRW--IRQNPTCPLCKV 48
>gi|61287193|dbj|BAD91102.1| transcriptional activator [Equid herpesvirus 1]
Length = 531
Score = 43.1 bits (100), Expect = 0.033, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Query: 47 RCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKM 90
RCPICL +N S CLH FC++CI +W I + LCK+
Sbjct: 7 RCPICLEDPSNYSMALPCLHAFCYVCITRW--IRQNPTCPLCKV 48
>gi|61287181|dbj|BAD91096.1| transcriptional activator [Equid herpesvirus 1]
Length = 532
Score = 43.1 bits (100), Expect = 0.033, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Query: 47 RCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKM 90
RCPICL +N S CLH FC++CI +W I + LCK+
Sbjct: 7 RCPICLEDPSNYSMALPCLHAFCYVCITRW--IRQNPTCPLCKV 48
>gi|61287186|dbj|BAD91098.1| transcriptional activator [Equid herpesvirus 1]
Length = 532
Score = 43.1 bits (100), Expect = 0.034, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Query: 47 RCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKM 90
RCPICL +N S CLH FC++CI +W I + LCK+
Sbjct: 7 RCPICLEDPSNYSMALPCLHAFCYVCITRW--IRQNPTCPLCKV 48
>gi|50313304|ref|YP_053107.1| ubiquitin E3 ligase ICP0 [Equid herpesvirus 1]
gi|124137|sp|P28990.1|ICP0_EHV1B RecName: Full=E3 ubiquitin-protein ligase ICP0
gi|60389885|sp|P84445.1|ICP0_EHV1V RecName: Full=E3 ubiquitin-protein ligase ICP0; AltName:
Full=Infected cell protein 0
gi|42795190|gb|AAS45947.1| transcriptional regulator [Equid herpesvirus 1]
gi|49617047|gb|AAT67320.1| transcriptional activator [Equid herpesvirus 1]
gi|61287189|dbj|BAD91100.1| transcriptional activator [Equid herpesvirus 1]
Length = 532
Score = 43.1 bits (100), Expect = 0.034, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Query: 47 RCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKM 90
RCPICL +N S CLH FC++CI +W I + LCK+
Sbjct: 7 RCPICLEDPSNYSMALPCLHAFCYVCITRW--IRQNPTCPLCKV 48
>gi|50058098|dbj|BAD27395.1| transactivator protein [Equid herpesvirus 1]
Length = 532
Score = 43.1 bits (100), Expect = 0.034, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Query: 47 RCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKM 90
RCPICL +N S CLH FC++CI +W I + LCK+
Sbjct: 7 RCPICLEDPSNYSMALPCLHAFCYVCITRW--IRQNPTCPLCKV 48
>gi|391329712|ref|XP_003739312.1| PREDICTED: E3 ubiquitin-protein ligase Topors-like [Metaseiulus
occidentalis]
Length = 265
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 22/32 (68%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCIKQWSQI 79
C ICL +N+ +TD C H FCF C+ +WS++
Sbjct: 77 CAICLSKPSNKCFTDACYHRFCFSCLVEWSKV 108
>gi|442564435|dbj|BAM75913.1| ubiquitin E3 ligase ICP0 [Equid herpesvirus 1]
Length = 532
Score = 43.1 bits (100), Expect = 0.036, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Query: 47 RCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKM 90
RCPICL +N S CLH FC++CI +W I + LCK+
Sbjct: 7 RCPICLEDPSNYSMALPCLHAFCYVCITRW--IRQNPTCPLCKV 48
>gi|225455732|ref|XP_002273302.1| PREDICTED: uncharacterized protein LOC100266325 [Vitis vinifera]
gi|297734114|emb|CBI15361.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 7/50 (14%)
Query: 48 CPICLLVLNN--RSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRL 95
C ICLL + R + D+C H FCF+CI +W+++ S C M K+R
Sbjct: 53 CGICLLEDDRAIRGWVDSCDHYFCFVCIMEWAKVESR-----CPMCKRRF 97
>gi|94482007|gb|ABF21707.1| ring-finger protein [Human herpesvirus 3]
Length = 467
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRLL 96
C IC+ +++ T CLH+FCF+CI+ W+ S + LC+ Q +L
Sbjct: 19 CTICMSTVSDLGKTMPCLHDFCFVCIRAWTSTSVQC--PLCRCPVQSIL 65
>gi|94482155|gb|ABF21853.1| ring-finger protein [Human herpesvirus 3]
Length = 467
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRLL 96
C IC+ +++ T CLH+FCF+CI+ W+ S + LC+ Q +L
Sbjct: 19 CTICMSTVSDLGKTMPCLHDFCFVCIRAWTSTSVQC--PLCRCPVQSIL 65
>gi|365752407|gb|AEW88541.1| transactivator [Human herpesvirus 3]
Length = 467
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRLL 96
C IC+ +++ T CLH+FCF+CI+ W+ S + LC+ Q +L
Sbjct: 19 CTICMSTVSDLGKTMPCLHDFCFVCIRAWTSTSVQC--PLCRCPVQSIL 65
>gi|398651975|gb|AFO85565.1| ring-finger protein [Human herpesvirus 3]
Length = 467
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRLL 96
C IC+ +++ T CLH+FCF+CI+ W+ S + LC+ Q +L
Sbjct: 19 CTICMSTVSDLGKTMPCLHDFCFVCIRAWTSTSVQC--PLCRCPVQSIL 65
>gi|365752772|gb|AEW88901.1| transactivator [Human herpesvirus 3]
Length = 467
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRLL 96
C IC+ +++ T CLH+FCF+CI+ W+ S + LC+ Q +L
Sbjct: 19 CTICMSTVSDLGKTMPCLHDFCFVCIRAWTSTSVQC--PLCRCPVQSIL 65
>gi|351725677|ref|NP_001236333.1| uncharacterized protein LOC100306017 [Glycine max]
gi|255627293|gb|ACU13991.1| unknown [Glycine max]
Length = 228
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 11/72 (15%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCIKQWSQI--SSESSP------ALCKMSKQRLLLFA 99
CPICL SY D C H+FCF CI +W+++ S SP LCK ++
Sbjct: 27 CPICLGSFLQLSYLDKCFHKFCFNCILRWTKVVASKHRSPPSSVKCPLCKTENFSIIYVV 86
Query: 100 SATECLQ--YIN 109
+ C Q Y+N
Sbjct: 87 DGS-CFQRHYVN 97
>gi|9625935|ref|NP_040183.1| ubiquitin E3 ligase ICP0 [Human herpesvirus 3]
gi|124139|sp|P09309.1|IE61_VZVD RecName: Full=E3 ubiquitin-protein ligase IE61; AltName:
Full=Immediate-early protein 61; Short=IE61
gi|7385034|gb|AAF61662.1|AF206304_13 ORF61 [Human herpesvirus 3]
gi|13345210|gb|AAK19258.1|AF314221_13 ORF61 [Human herpesvirus 3 VZV-32]
gi|60050|emb|CAA27944.1| ring-finger protein [Human herpesvirus 3 strain Dumas]
gi|46981471|gb|AAT07742.1| transactivator [Human herpesvirus 3]
gi|46981542|gb|AAT07818.1| transactivator [Human herpesvirus 3]
gi|66866022|gb|AAY57670.1| ORF61 [Human herpesvirus 3]
gi|66866094|gb|AAY57741.1| ORF61 [Human herpesvirus 3]
gi|83721868|emb|CAI44903.1| modulator of cell state and gene expression [Human herpesvirus 3]
gi|90992860|gb|ABE03079.1| ring-finger protein [Human herpesvirus 3]
gi|91980362|gb|ABE67169.1| ring-finger protein [Human herpesvirus 3]
gi|94481859|gb|ABF21561.1| ring-finger protein [Human herpesvirus 3]
gi|94481933|gb|ABF21634.1| ring-finger protein [Human herpesvirus 3]
gi|94482081|gb|ABF21780.1| ring-finger protein [Human herpesvirus 3]
gi|94482229|gb|ABF21926.1| ring-finger protein [Human herpesvirus 3]
gi|94482303|gb|ABF21999.1| ring-finger protein [Human herpesvirus 3]
gi|94482377|gb|ABF22072.1| ring-finger protein [Human herpesvirus 3]
gi|94482451|gb|ABF22145.1| ring-finger protein [Human herpesvirus 3]
gi|94482525|gb|ABF22218.1| ring-finger protein [Human herpesvirus 3]
gi|94482599|gb|ABF22291.1| ring-finger protein [Human herpesvirus 3]
gi|111184789|gb|ABH08497.1| unknown [Human herpesvirus 3]
gi|157965734|gb|ABW06880.1| transcription regulator [Human herpesvirus 3]
gi|219957696|gb|ACL67902.1| ring-finger protein [Human herpesvirus 3]
gi|219957744|gb|ACL67949.1| ring-finger protein [Human herpesvirus 3]
gi|342672217|gb|AEL30876.1| ORF61 [Human herpesvirus 3]
gi|365751896|gb|AEW88037.1| transactivator [Human herpesvirus 3]
gi|365751969|gb|AEW88109.1| transactivator [Human herpesvirus 3]
gi|365752042|gb|AEW88181.1| transactivator [Human herpesvirus 3]
gi|365752115|gb|AEW88253.1| transactivator [Human herpesvirus 3]
gi|365752188|gb|AEW88325.1| transactivator [Human herpesvirus 3]
gi|365752261|gb|AEW88397.1| transactivator [Human herpesvirus 3]
gi|365752334|gb|AEW88469.1| transactivator [Human herpesvirus 3]
gi|365752480|gb|AEW88613.1| transactivator [Human herpesvirus 3]
gi|365752553|gb|AEW88685.1| transactivator [Human herpesvirus 3]
gi|365752626|gb|AEW88757.1| transactivator [Human herpesvirus 3]
gi|365752699|gb|AEW88829.1| transactivator [Human herpesvirus 3]
gi|365752845|gb|AEW88973.1| transactivator [Human herpesvirus 3]
gi|365752918|gb|AEW89045.1| transactivator [Human herpesvirus 3]
gi|365752991|gb|AEW89117.1| transactivator [Human herpesvirus 3]
gi|365753064|gb|AEW89189.1| transactivator [Human herpesvirus 3]
gi|365753137|gb|AEW89261.1| transactivator [Human herpesvirus 3]
gi|365753210|gb|AEW89333.1| transactivator [Human herpesvirus 3]
gi|365753283|gb|AEW89405.1| transactivator [Human herpesvirus 3]
gi|365753356|gb|AEW89477.1| transactivator [Human herpesvirus 3]
gi|387179249|gb|AFJ68562.1| ubiquitin E3 ligase ICP0 [Human herpesvirus 3]
gi|398652049|gb|AFO85638.1| ring-finger protein [Human herpesvirus 3]
gi|443500695|gb|AGC94561.1| ubiquitin E3 ligase [Human herpesvirus 3]
gi|228664|prf||1808271A gene 61 protein
Length = 467
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRLL 96
C IC+ +++ T CLH+FCF+CI+ W+ S + LC+ Q +L
Sbjct: 19 CTICMSTVSDLGKTMPCLHDFCFVCIRAWTSTSVQC--PLCRCPVQSIL 65
>gi|330841420|ref|XP_003292696.1| hypothetical protein DICPUDRAFT_83299 [Dictyostelium purpureum]
gi|325077040|gb|EGC30780.1| hypothetical protein DICPUDRAFT_83299 [Dictyostelium purpureum]
Length = 525
Score = 42.7 bits (99), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
Query: 14 LELPEIQQASKKQKNDN--PSEDDSDGDRPTSPTSRCPICLLVLN-NRSYTDTCLHEFCF 70
+ L IQ+ ++++++D SE ++ G +C ICL ++ N T CLH+FCF
Sbjct: 434 VRLDRIQRDNEERESDERETSERENLGSERLESEDKCTICLNYIDINDMATIDCLHKFCF 493
Query: 71 LCIKQWSQ 78
CI+QWS+
Sbjct: 494 ACIEQWSR 501
>gi|407846432|gb|EKG02549.1| DNA repair protein, putative [Trypanosoma cruzi]
Length = 300
Score = 42.7 bits (99), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 6/93 (6%)
Query: 5 LFRQTQKRRLELPEIQQASKKQKNDNPSEDDSDGDRPTSPTSRCPICLLVLNNRS--YTD 62
L+R ++RRL L + + + +DSD D + + C+L L+NR
Sbjct: 185 LWRYMERRRLALQQGSHYDVSRDEEGQEHEDSDAD--DNQNAAAGKCMLCLSNRKQPTAT 242
Query: 63 TCLHEFCFLCIKQWSQISSESSPALCKMSKQRL 95
+C H FC+ C+ W I S S A+C ++++
Sbjct: 243 SCGHIFCWRCLLDW--IKSNSHGAICPFCRRQI 273
>gi|356535101|ref|XP_003536087.1| PREDICTED: E3 ubiquitin-protein ligase Topors-like [Glycine max]
Length = 281
Score = 42.7 bits (99), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 11/72 (15%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISS---ESSPA-----LCKMSKQRLLLFA 99
CPICL SY D C H+FCF CI +W+++ + S P+ LCK ++ +++
Sbjct: 29 CPICLGPFLQLSYLDKCFHKFCFNCILRWTKVVAGKHRSPPSSVKCPLCK-TENFSIIYG 87
Query: 100 SATECLQ--YIN 109
C Q Y+N
Sbjct: 88 VDGSCFQRHYVN 99
>gi|403365805|gb|EJY82694.1| hypothetical protein OXYTRI_19693 [Oxytricha trifallax]
Length = 388
Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 47 RCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRLLLFASAT 102
+C ICL V+N ++ C H FC CI+ WS++ E+ LCK+ L ++ S +
Sbjct: 34 KCTICLEVVNQKTKPKECSHLFCLECIQSWSKV--ENKCPLCKVQFTYLHVYGSQS 87
>gi|71667821|ref|XP_820856.1| peroxisome assembly protein [Trypanosoma cruzi strain CL Brener]
gi|70886217|gb|EAN99005.1| peroxisome assembly protein, putative [Trypanosoma cruzi]
Length = 300
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 6/93 (6%)
Query: 5 LFRQTQKRRLELPEIQQASKKQKNDNPSEDDSDGDRPTSPTSRCPICLLVLNNRS--YTD 62
L+R ++RRL L + + ++ +DSD D + + C+L L+NR
Sbjct: 185 LWRYMERRRLALQQGSHYDVSRDEESQEHEDSDAD--DNQNAAAGKCMLCLSNRKQPTAT 242
Query: 63 TCLHEFCFLCIKQWSQISSESSPALCKMSKQRL 95
+C H FC+ C+ W I S S A+C ++++
Sbjct: 243 SCGHIFCWRCLLDW--IKSNSHGAICPFCRRQI 273
>gi|145476643|ref|XP_001424344.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124391408|emb|CAK56946.1| unnamed protein product [Paramecium tetraurelia]
Length = 132
Score = 42.7 bits (99), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 30 NPSEDDSDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCK 89
N E R S C IC + N+ D+C H FC CIK+WS I E++ LCK
Sbjct: 20 NMKEQAQRQTRFQSKAESCGICYNAIENQGVLDSCNHSFCSDCIKKWSNI--ENTCPLCK 77
>gi|218193959|gb|EEC76386.1| hypothetical protein OsI_14011 [Oryza sativa Indica Group]
Length = 262
Score = 42.4 bits (98), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 21/33 (63%)
Query: 49 PICLLVLNNRSYTDTCLHEFCFLCIKQWSQISS 81
PICL + +Y DTC H FC+ CI QW +I S
Sbjct: 11 PICLDSFLDEAYLDTCFHSFCYKCICQWVKIVS 43
>gi|356511439|ref|XP_003524434.1| PREDICTED: uncharacterized protein At4g10930-like [Glycine max]
Length = 1307
Score = 42.4 bits (98), Expect = 0.057, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 5/62 (8%)
Query: 36 SDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRL 95
+D D RC IC+ ++ +R D C H FCF+CI W+ I++ LC + +
Sbjct: 21 NDNDDVAVEGERCGICMDMVIDRGLLDCCQHWFCFVCIDNWATITN-----LCPLCQNEF 75
Query: 96 LL 97
L
Sbjct: 76 QL 77
>gi|222626021|gb|EEE60153.1| hypothetical protein OsJ_13056 [Oryza sativa Japonica Group]
Length = 288
Score = 42.4 bits (98), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 21/33 (63%)
Query: 49 PICLLVLNNRSYTDTCLHEFCFLCIKQWSQISS 81
PICL + +Y DTC H FC+ CI QW +I S
Sbjct: 36 PICLDSFLDEAYLDTCFHSFCYKCICQWVKIVS 68
>gi|384246349|gb|EIE19839.1| hypothetical protein COCSUDRAFT_58076 [Coccomyxa subellipsoidea
C-169]
Length = 263
Score = 42.4 bits (98), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 29/48 (60%)
Query: 46 SRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQ 93
+RC +CL ++ + C+H FC CI++W +++SE S C++ Q
Sbjct: 12 TRCSVCLGIVKSCRLVSGCMHRFCADCIEKWLRVASEPSCPQCRVQMQ 59
>gi|356527686|ref|XP_003532439.1| PREDICTED: uncharacterized protein At4g10930-like [Glycine max]
Length = 1316
Score = 42.4 bits (98), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 23/35 (65%)
Query: 47 RCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISS 81
RC IC+ ++ +R D C H FCF+CI W+ I++
Sbjct: 61 RCGICMDMVIDRGLLDCCQHWFCFVCIDNWATITN 95
>gi|343797349|gb|AEM64139.1| ICP0 [Suid herpesvirus 1]
Length = 367
Score = 42.4 bits (98), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRLL 96
CPICL V + T C+H+FC CI++W+ ++S + P LCK +L
Sbjct: 3 CPICLDVAATEAQTLPCMHKFCLDCIQRWT-LTSTACP-LCKARVTSIL 49
>gi|321474943|gb|EFX85907.1| hypothetical protein DAPPUDRAFT_309016 [Daphnia pulex]
Length = 163
Score = 42.4 bits (98), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 8/72 (11%)
Query: 46 SRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRLLLFASATECL 105
S C ICL + N+ + + CLHEFC+ C+ +WS+ ++ C + Q F+S +
Sbjct: 19 SPCAICLGKVENKCFANNCLHEFCYSCLFRWSKEKTK-----CPLCMQP---FSSIIHNI 70
Query: 106 QYINVYDIMILQ 117
+ N YD I+Q
Sbjct: 71 RSSNDYDEQIIQ 82
>gi|330799860|ref|XP_003287959.1| hypothetical protein DICPUDRAFT_78800 [Dictyostelium purpureum]
gi|325082037|gb|EGC35533.1| hypothetical protein DICPUDRAFT_78800 [Dictyostelium purpureum]
Length = 566
Score = 42.4 bits (98), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Query: 34 DDSDGDRPTSPTSRCPICLLVLN-NRSYTDTCLHEFCFLCIKQWS 77
D+ +G+R + +C ICL +N N T CLH+FC+ CI+QWS
Sbjct: 499 DNLEGERLET-NEKCTICLNFININEMATIDCLHKFCYRCIQQWS 542
>gi|164429832|gb|ABY55292.1| early protein 0 [Suid herpesvirus 1]
Length = 409
Score = 42.4 bits (98), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRLL 96
CPICL V + T C+H+FC CI++W+ ++S + P LCK +L
Sbjct: 46 CPICLDVAATEAQTLPCMHKFCLDCIQRWT-LTSTACP-LCKTRVTSIL 92
>gi|10444421|gb|AAG17904.1|AF298586_1 early protein EPO [Pseudorabies virus Ea]
Length = 409
Score = 42.4 bits (98), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRLL 96
CPICL V + T C+H+FC CI++W+ ++S + P LCK +L
Sbjct: 46 CPICLDVAATEAQTLPCMHKFCLDCIQRWT-LTSTACP-LCKTRVTSIL 92
>gi|217039772|gb|ACJ76976.1| early protein 0 [Suid herpesvirus 1]
Length = 409
Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRLL 96
CPICL V + T C+H+FC CI++W+ ++S + P LCK +L
Sbjct: 46 CPICLDVAATEAQTLPCMHKFCLDCIQRWT-LTSTACP-LCKTRVTSIL 92
>gi|145548732|ref|XP_001460046.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124427874|emb|CAK92649.1| unnamed protein product [Paramecium tetraurelia]
Length = 134
Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Query: 40 RPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCK 89
R S C IC ++ + D+C H FC CI+QWS I E++ LCK
Sbjct: 10 RFQSKAEECGICYNTIDQQGQLDSCNHSFCLACIQQWSNI--ENTCPLCK 57
>gi|330804005|ref|XP_003289990.1| hypothetical protein DICPUDRAFT_80748 [Dictyostelium purpureum]
gi|325079888|gb|EGC33467.1| hypothetical protein DICPUDRAFT_80748 [Dictyostelium purpureum]
Length = 549
Score = 42.0 bits (97), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Query: 34 DDSDGDRPTSPTSRCPICLLVLN-NRSYTDTCLHEFCFLCIKQWS 77
D+ +G+R + +C ICL +N N T CLH+FC+ CI+QWS
Sbjct: 481 DNLEGERLET-NEKCTICLNFININEMATIDCLHKFCYGCIQQWS 524
>gi|321456775|gb|EFX67875.1| hypothetical protein DAPPUDRAFT_229111 [Daphnia pulex]
Length = 1870
Score = 42.0 bits (97), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Query: 36 SDGDRPTSPTSRCPICLLVLNNRS--YTDTCLHEFCFLCIKQWSQ 78
SD D T ++ CPICLL ++ + + C H FC CI +WS+
Sbjct: 47 SDSDSSTGNSATCPICLLKFKGQAIGFPEVCGHPFCLDCILEWSK 91
>gi|345484005|ref|XP_001599356.2| PREDICTED: E3 ubiquitin-protein ligase RFWD3-like [Nasonia
vitripennis]
Length = 623
Score = 42.0 bits (97), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 52/114 (45%), Gaps = 23/114 (20%)
Query: 3 ESLFRQTQKR-RLELPEIQQASKKQKNDNPSEDDSDGDRPTSPTSRCPICLLVLNN---- 57
E + Q+QKR +L++PE Q A + D RCPICL + +N
Sbjct: 127 EEVIEQSQKRIKLDVPEPQSAQ------------AIADETIGEDHRCPICLELWSNSGEH 174
Query: 58 RSYTDTCLHEFCFLCIKQWSQISSESSPALC-----KMSKQRL-LLFASATECL 105
R + C H F CI+QW I+ ++ C K SK+ + +L+A C+
Sbjct: 175 RLCSLRCGHLFGLKCIEQWFNIAQNATGRKCPECNTKASKKDIRILYAKNLVCV 228
>gi|145507979|ref|XP_001439939.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124407145|emb|CAK72542.1| unnamed protein product [Paramecium tetraurelia]
Length = 106
Score = 42.0 bits (97), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%)
Query: 47 RCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSE 82
+C ICL + +N+ + D+C H FCF CI +WSQ S +
Sbjct: 11 KCVICLSLASNQVHLDSCNHLFCFTCINKWSQKSHQ 46
>gi|168046477|ref|XP_001775700.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672973|gb|EDQ59503.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1525
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 45 TSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKM 90
+ RC IC + R D C HE+CF CI+ WS +S+ LCK+
Sbjct: 109 SGRCGICSGHVAIRGVLDCCSHEYCFDCIENWSSVSNMC--PLCKL 152
>gi|393214027|gb|EJC99521.1| hypothetical protein FOMMEDRAFT_22997 [Fomitiporia mediterranea
MF3/22]
Length = 708
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 7/48 (14%)
Query: 33 EDDSDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQIS 80
E++ DGD C ICL +L +R+ C HEFCF CI W+ S
Sbjct: 32 EEEVDGDH-------CSICLQLLLDRTVIPECSHEFCFECIVTWTDQS 72
>gi|224123688|ref|XP_002330183.1| predicted protein [Populus trichocarpa]
gi|222871639|gb|EEF08770.1| predicted protein [Populus trichocarpa]
Length = 735
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 9/74 (12%)
Query: 48 CPICLLVLNNRSYT---DTCLHEFCFLCIKQWSQISSESSPALCKMSKQRLLLFASATEC 104
C ICL + R + D C H FCF CI +WS++ S C + KQR
Sbjct: 247 CGICLSEEDKRRFRGTLDCCSHYFCFTCIMEWSKVESR-----CPLCKQRFRTITKNGRS 301
Query: 105 LQYINVYDIMILQV 118
+ +++ + M++QV
Sbjct: 302 IVGVDLRN-MVIQV 314
>gi|324500529|gb|ADY40246.1| E3 ubiquitin-protein ligase Topor [Ascaris suum]
Length = 1026
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 8/76 (10%)
Query: 21 QASKKQKNDNPSEDDSDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQIS 80
+ K +N + SDG P CPICL + + D+C H FCF I +W IS
Sbjct: 71 KVEKGSTAENDETESSDGGDP------CPICLRRCEDEAKLDSCSHRFCFGHICEW--IS 122
Query: 81 SESSPALCKMSKQRLL 96
+CK S ++++
Sbjct: 123 LNPVCPMCKRSVRKIM 138
>gi|341877844|gb|EGT33779.1| hypothetical protein CAEBREN_12747 [Caenorhabditis brenneri]
Length = 385
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMS 91
C IC+ VL+N + CLH FC CI +W++ ++ P +C++S
Sbjct: 29 CCICMAVLHNAASCTPCLHTFCIGCIAKWNETNNGKCP-MCRVS 71
>gi|255547077|ref|XP_002514596.1| splicing factor, arginine/serine-rich 2,rnap interacting protein,
putative [Ricinus communis]
gi|223546200|gb|EEF47702.1| splicing factor, arginine/serine-rich 2,rnap interacting protein,
putative [Ricinus communis]
Length = 632
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 12/78 (15%)
Query: 25 KQKNDNPSEDDSDGDR--PTSPTSRCPICLLVLNN-----RSYTDTCLHEFCFLCIKQWS 77
KQ++D + G+R P T IC + L+ R D+C H FCF+CI +W+
Sbjct: 20 KQESDEYDFEGRQGNRLTPMESTGESLICGICLSENWSAMRGQIDSCDHYFCFICIMEWA 79
Query: 78 QISSESSPALCKMSKQRL 95
+I S C M K+R
Sbjct: 80 KIESR-----CPMCKRRF 92
>gi|218186584|gb|EEC69011.1| hypothetical protein OsI_37805 [Oryza sativa Indica Group]
Length = 1218
Score = 41.2 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRL 95
C IC ++ +R D C H FC+ CI WS I++ LCK QR+
Sbjct: 33 CGICRDIVIDRGVLDCCQHWFCYTCIDNWSAITNRC--PLCKSEFQRI 78
>gi|403372081|gb|EJY85929.1| RING/U-box protein [Oxytricha trifallax]
Length = 954
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Query: 41 PTSPTSRCPICL--LVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKM 90
P C IC + L +++ ++C+H FCF+CIK+W+ + + P LCK
Sbjct: 262 PQQQEKMCTICQCEMELQDQATIESCIHVFCFVCIKEWATKAENTCP-LCKQ 312
>gi|167536280|ref|XP_001749812.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771739|gb|EDQ85401.1| predicted protein [Monosiga brevicollis MX1]
Length = 538
Score = 41.2 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 10/64 (15%)
Query: 41 PTSP-------TSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQ 93
P+SP +++CP+CL VL YTD C H FCF C+++ +S + +C+
Sbjct: 2 PSSPEALNSEGSAKCPVCLDVLAEGVYTD-CRHGFCFECLRE--SLSRNRACPVCRRRVS 58
Query: 94 RLLL 97
R+LL
Sbjct: 59 RVLL 62
>gi|50540748|gb|AAT77904.1| putative RING-finger protein [Oryza sativa Japonica Group]
Length = 115
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 21/33 (63%)
Query: 49 PICLLVLNNRSYTDTCLHEFCFLCIKQWSQISS 81
PICL + +Y DTC H FC+ CI QW +I S
Sbjct: 36 PICLDSFLDEAYLDTCFHSFCYKCICQWVKIVS 68
>gi|303289707|ref|XP_003064141.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454457|gb|EEH51763.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 683
Score = 41.2 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Query: 47 RCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCK 89
+C IC ++ R D+C H FC CIK+W++I E+ LCK
Sbjct: 69 QCAICQEDVSRRGRLDSCAHVFCVACIKRWAKI--ETRCPLCK 109
>gi|157830606|pdb|1CHC|A Chain A, Structure Of The C3hc4 Domain By 1h-Nuclear Magnetic
Resonance Spectroscopy; A New Structural Class Of Zinc-
Finger
Length = 68
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Query: 47 RCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRLL 96
RCPICL +N S CLH FC++CI +W I + LCK+ + ++
Sbjct: 7 RCPICLEDPSNYSMALPCLHAFCYVCITRW--IRQNPTCPLCKVPVESVV 54
>gi|330843109|ref|XP_003293505.1| hypothetical protein DICPUDRAFT_158371 [Dictyostelium purpureum]
gi|325076155|gb|EGC29966.1| hypothetical protein DICPUDRAFT_158371 [Dictyostelium purpureum]
Length = 544
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 32 SEDDSDGDRPTSPTSRCPICLLVLN-NRSYTDTCLHEFCFLCIKQWSQ 78
SE ++ G +C ICL ++ N T CLH+FCF CI+QWS+
Sbjct: 469 SEIENLGSERLESEDKCTICLNFIDRNEMATIDCLHKFCFACIEQWSR 516
>gi|123485792|ref|XP_001324571.1| FHA domain containing protein [Trichomonas vaginalis G3]
gi|121907456|gb|EAY12348.1| FHA domain containing protein [Trichomonas vaginalis G3]
Length = 342
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Query: 31 PSEDDSDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWS-QISSESSPALCK 89
PS + + RP+ CPIC L S T C H FC CI QW+ Q + P +C
Sbjct: 130 PSTNINQSIRPSDDCELCPICFGPLT-ASETLPCGHTFCLTCIHQWADQCLLQQRPCVCP 188
Query: 90 MSKQRLL 96
M + L
Sbjct: 189 MCRATFL 195
>gi|163914509|ref|NP_001106338.1| uncharacterized protein LOC100127298 [Xenopus laevis]
gi|161611655|gb|AAI55906.1| LOC100127298 protein [Xenopus laevis]
gi|213623260|gb|AAI69503.1| Hypothetical protein LOC100127298 [Xenopus laevis]
gi|213626480|gb|AAI69501.1| Hypothetical protein LOC100127298 [Xenopus laevis]
Length = 200
Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 47 RCPICLLVL--NNRSYTDTCLHEFCFLCIKQWSQISS 81
RCPICL L ++ ++ + C H FCF CI +WS+ S+
Sbjct: 39 RCPICLNFLRKDDVAFPENCYHAFCFTCILKWSETST 75
>gi|224125062|ref|XP_002319493.1| predicted protein [Populus trichocarpa]
gi|222857869|gb|EEE95416.1| predicted protein [Populus trichocarpa]
Length = 810
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 8/71 (11%)
Query: 48 CPICLLVLNNR---SYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRLLLFASATEC 104
C ICL + R D C H FCF CI +WS++ S C + KQR A
Sbjct: 322 CGICLSEEDKRRLRGTLDCCSHYFCFTCIMEWSKVESR-----CPLCKQRFSTIAKNGRS 376
Query: 105 LQYINVYDIMI 115
+++ +++I
Sbjct: 377 AMGVDLRNMVI 387
>gi|170111246|ref|XP_001886827.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164638185|gb|EDR02464.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 606
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 8/53 (15%)
Query: 28 NDNPSEDDSDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQIS 80
+D P D+SD + C ICL + +R+ C HEFCF C+ W++ S
Sbjct: 40 DDEPEADESDDN--------CSICLHSVVDRTVVPKCSHEFCFECLLVWTEQS 84
>gi|7707279|dbj|BAA95211.1| infected cell protein 0 [Canid herpesvirus 1]
Length = 333
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRLL 96
C ICL N + T +CLH+FC+ C+ +W+++S ++ LCK Q ++
Sbjct: 8 CTICLEPPKNMTVTMSCLHKFCYDCLSEWTKVS--NTCPLCKSIIQSMI 54
>gi|156393539|ref|XP_001636385.1| predicted protein [Nematostella vectensis]
gi|156223488|gb|EDO44322.1| predicted protein [Nematostella vectensis]
Length = 61
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 4/44 (9%)
Query: 36 SDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQI 79
SD D +P +C ICL +N+S+ D H FCF CI QWS++
Sbjct: 5 SDDD---APQDQCSICLCEFDNKSFLDQ-SHAFCFYCILQWSEV 44
>gi|452823201|gb|EME30213.1| E3 ubiquitin-protein ligase Topors [Galdieria sulphuraria]
Length = 236
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCIKQWSQI---SSESSPALCKMSKQRL 95
CPICL L N ++ + C H FC+ C+ W + S +SS A C + K +
Sbjct: 3 CPICLDRLRNSTFCEPCFHSFCYNCLLSWFRTLKRSKQSSRATCPLCKAEV 53
>gi|126802154|ref|YP_068377.2| ubiquitin E3 ligase ICP0 [Suid herpesvirus 1]
Length = 367
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 22/34 (64%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISS 81
CPICL V + T C+H+FC CI++W+ S+
Sbjct: 3 CPICLDVAATEAQTLPCMHKFCLDCIQRWTLTST 36
>gi|302683312|ref|XP_003031337.1| hypothetical protein SCHCODRAFT_109777 [Schizophyllum commune
H4-8]
gi|300105029|gb|EFI96434.1| hypothetical protein SCHCODRAFT_109777, partial [Schizophyllum
commune H4-8]
Length = 700
Score = 40.8 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 25/68 (36%), Positives = 33/68 (48%), Gaps = 9/68 (13%)
Query: 21 QASKKQKNDNPSEDDSDGDRPTSPTS--------RCPICLLVLNNRSYTDTCLHEFCFLC 72
+ S KQ+N N SD DR + C ICL L +R+ TC HEFCF C
Sbjct: 6 EVSVKQENHNDDNVASD-DREDAVEDLDFEDDGHNCSICLQELVDRTVIPTCSHEFCFEC 64
Query: 73 IKQWSQIS 80
+ W++ S
Sbjct: 65 LLIWTEQS 72
>gi|330796540|ref|XP_003286324.1| hypothetical protein DICPUDRAFT_77216 [Dictyostelium purpureum]
gi|325083675|gb|EGC37121.1| hypothetical protein DICPUDRAFT_77216 [Dictyostelium purpureum]
Length = 507
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Query: 47 RCPICLLVLN-NRSYTDTCLHEFCFLCIKQWS 77
+C ICL ++ N T CLH+FCF CI+QWS
Sbjct: 451 KCTICLNFIDINEMATIDCLHKFCFTCIEQWS 482
>gi|124138|sp|P29129.1|ICP0_SUHVF RecName: Full=E3 ubiquitin-protein ligase ICP0; AltName:
Full=Early protein 0; Short=EP0
gi|334048|gb|AAA47463.1| EPO [Suid herpesvirus 1]
gi|40254002|tpg|DAA02197.1| TPA_exp: early protein EP0 [Suid herpesvirus 1]
Length = 410
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 22/34 (64%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISS 81
CPICL V + T C+H+FC CI++W+ S+
Sbjct: 46 CPICLDVAATEAQTLPCMHKFCLDCIQRWTLTST 79
>gi|18413402|ref|NP_567371.1| RING/U-box protein [Arabidopsis thaliana]
gi|332657549|gb|AEE82949.1| RING/U-box protein [Arabidopsis thaliana]
Length = 192
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 20/33 (60%)
Query: 47 RCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQI 79
RC IC+ ++ +R D C H FCF CI WS I
Sbjct: 30 RCGICMDIIIDRGVLDCCQHWFCFECIDNWSTI 62
>gi|297813547|ref|XP_002874657.1| PHD finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297320494|gb|EFH50916.1| PHD finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 192
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 20/33 (60%)
Query: 47 RCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQI 79
RC IC+ ++ +R D C H FCF CI WS I
Sbjct: 30 RCGICMDIIIDRGVLDCCQHWFCFECIDNWSTI 62
>gi|312374253|gb|EFR21843.1| hypothetical protein AND_16267 [Anopheles darlingi]
Length = 2451
Score = 40.4 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 23/34 (67%), Gaps = 2/34 (5%)
Query: 47 RCPICLLVLNNRSY--TDTCLHEFCFLCIKQWSQ 78
+CPICLL L+N+ + C H FC CI++WS+
Sbjct: 128 KCPICLLSLHNQQVGVPEVCEHVFCAACIEEWSR 161
>gi|168063588|ref|XP_001783752.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664695|gb|EDQ51404.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 76
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 23/39 (58%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPA 86
C ICL + ++ D C H FC+ CI QWS++ +S A
Sbjct: 14 CSICLESVTGEAFLDQCFHRFCYHCILQWSEMVMAASLA 52
>gi|330789702|ref|XP_003282938.1| hypothetical protein DICPUDRAFT_146518 [Dictyostelium purpureum]
gi|325087222|gb|EGC40602.1| hypothetical protein DICPUDRAFT_146518 [Dictyostelium purpureum]
Length = 547
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Query: 47 RCPICLLVLN-NRSYTDTCLHEFCFLCIKQWSQ 78
+C ICL ++ N T CLH+FCF CI+QWS+
Sbjct: 495 KCTICLNFIDRNEMATIDCLHKFCFTCIEQWSR 527
>gi|66813150|ref|XP_640754.1| hypothetical protein DDB_G0280987 [Dictyostelium discoideum AX4]
gi|60468790|gb|EAL66790.1| hypothetical protein DDB_G0280987 [Dictyostelium discoideum AX4]
Length = 284
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 46 SRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRLL 96
+RC ICL + N++ + C H +CF CI W + S S LCK+ + L+
Sbjct: 6 TRCSICLSDIENQTKNNQCNHIYCFDCIFNW--VKSNDSCPLCKVKIKELI 54
>gi|407407078|gb|EKF31049.1| DNA repair protein, putative [Trypanosoma cruzi marinkellei]
Length = 300
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 47/99 (47%), Gaps = 8/99 (8%)
Query: 6 FRQTQKRRLELPEIQQASKKQ-KNDNPSEDDSDGDRPTSPTSRCPICLLVLNNRS--YTD 62
+R + RRL L QQ S D S++ D D + + C+L L+NR
Sbjct: 186 WRYMEGRRLAL---QQGSHYDVSRDEESQEHEDSDADDNQNAAAGKCMLCLSNRKQPTAT 242
Query: 63 TCLHEFCFLCIKQWSQISSESSPALCKMSKQRLLLFASA 101
+C H FC+ C+ W I S S A+C ++++ + +S
Sbjct: 243 SCGHIFCWRCLLDW--IKSNSHGAICPFCRRQITVQSSV 279
>gi|412986673|emb|CCO15099.1| predicted protein [Bathycoccus prasinos]
Length = 571
Score = 40.4 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 5/48 (10%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRL 95
C +CL R ++C H FC+ CI WS++ ++ C M KQR
Sbjct: 19 CSVCLSRPEQRGRIESCSHLFCYRCIYDWSRVETK-----CPMCKQRF 61
>gi|449545040|gb|EMD36012.1| hypothetical protein CERSUDRAFT_96236 [Ceriporiopsis
subvermispora B]
Length = 360
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 8/65 (12%)
Query: 17 PEIQQASKKQKNDNPSE-DDSDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQ 75
P + A D P + DDSD +C ICL L +R+ C HEFCF C+
Sbjct: 21 PPLDAARTVDDPDIPHDLDDSD-------VEQCSICLQPLADRTIIPKCSHEFCFECLLV 73
Query: 76 WSQIS 80
W++ S
Sbjct: 74 WTEQS 78
>gi|357511785|ref|XP_003626181.1| PHD and RING finger domain-containing protein [Medicago truncatula]
gi|355501196|gb|AES82399.1| PHD and RING finger domain-containing protein [Medicago truncatula]
Length = 904
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 5/64 (7%)
Query: 48 CPICLLVLNNR---SYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRLLLFASATEC 104
C ICL N R ++C H FCF CI +WS++ ES LCK Q + A +T
Sbjct: 426 CGICLSEENKRRVRGVLNSCTHYFCFACIMEWSKV--ESRCPLCKQRFQTISKPARSTTA 483
Query: 105 LQYI 108
+ +
Sbjct: 484 EEAV 487
>gi|15230025|ref|NP_187218.1| RING/U-box protein [Arabidopsis thaliana]
gi|6714443|gb|AAF26130.1|AC011620_6 unknown protein [Arabidopsis thaliana]
gi|21539513|gb|AAM53309.1| unknown protein [Arabidopsis thaliana]
gi|27311925|gb|AAO00928.1| unknown protein [Arabidopsis thaliana]
gi|332640753|gb|AEE74274.1| RING/U-box protein [Arabidopsis thaliana]
Length = 883
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 8/71 (11%)
Query: 48 CPICLLVLNNR---SYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRLLLFASATEC 104
C ICL + R D C H FCF CI +WS++ S C + KQR +
Sbjct: 413 CGICLSEEDMRRLKGTLDCCSHYFCFTCIMEWSKVESR-----CPLCKQRFRTISKPARS 467
Query: 105 LQYINVYDIMI 115
+++ +++I
Sbjct: 468 TPGVDLREVVI 478
>gi|354498262|ref|XP_003511234.1| PREDICTED: protein SCAF11-like [Cricetulus griseus]
Length = 1523
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 42/84 (50%), Gaps = 15/84 (17%)
Query: 11 KRRLELPEIQQASKKQKNDNPSE---DDSDGD--RPTSPTS--------RCPICL--LVL 55
KR E+P + K N N S+ DD +G+ R + TS RCPICL L+
Sbjct: 73 KRPEEIPSRGEMKKSIYNQNVSDQECDDMEGEENRNNAGTSGLLYNEADRCPICLSCLLG 132
Query: 56 NNRSYTDTCLHEFCFLCIKQWSQI 79
+ ++C H FC CI +WS+I
Sbjct: 133 KEVGFPESCNHVFCLTCILKWSEI 156
>gi|297829096|ref|XP_002882430.1| hypothetical protein ARALYDRAFT_477858 [Arabidopsis lyrata subsp.
lyrata]
gi|297328270|gb|EFH58689.1| hypothetical protein ARALYDRAFT_477858 [Arabidopsis lyrata subsp.
lyrata]
Length = 869
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 8/71 (11%)
Query: 48 CPICLLVLNNR---SYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRLLLFASATEC 104
C ICL + R D C H FCF CI +WS++ S C + KQR +
Sbjct: 400 CGICLSEEDMRRLKGTLDCCSHYFCFTCIMEWSKVESR-----CPLCKQRFRTISKPARS 454
Query: 105 LQYINVYDIMI 115
+++ +++I
Sbjct: 455 TPGVDLREVVI 465
>gi|224008767|ref|XP_002293342.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220970742|gb|EED89078.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 562
Score = 40.0 bits (92), Expect = 0.33, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 9/66 (13%)
Query: 31 PSEDDSDGDRPTSPTS----RCPICLLVLNNRSYTDT---CLHEFCFLCIKQWSQISSES 83
P++ +R T P+S CPICL + + T T C H+FCF CI +W+ ++E+
Sbjct: 126 PNQSSGSNNRDTKPSSLEEVTCPICLDNPPSPTQTATLNGCTHKFCFDCIDRWA--NTEN 183
Query: 84 SPALCK 89
CK
Sbjct: 184 RCPCCK 189
>gi|395548609|ref|XP_003775237.1| PREDICTED: RING finger protein 166-like [Sarcophilus harrisii]
Length = 383
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 40/90 (44%), Gaps = 5/90 (5%)
Query: 1 MAESLFRQTQKRRLELPEIQQASKKQKNDNPSEDDSDGDRPTSPTSRCPICLLVLNNRSY 60
M SL TQ+R+ AS Q PS +SD + S CPICL V +
Sbjct: 136 MFRSLVSSTQQRQQPPTAGAPASSPQPPAEPSASESDLETQYS----CPICLEVYHRPVA 191
Query: 61 TDTCLHEFCFLCIKQWSQISSESSPALCKM 90
C H FC C++ Q+ S P LC++
Sbjct: 192 IGNCGHVFCGECLQPCLQVPSPLCP-LCRV 220
>gi|72386821|ref|XP_843835.1| peroxisome assembly protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62360261|gb|AAX80678.1| peroxisome assembly protein, putative [Trypanosoma brucei]
gi|70800367|gb|AAZ10276.1| peroxisome assembly protein, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
Length = 298
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 6/66 (9%)
Query: 32 SEDDSD-GDRPTSPTSRCPICLLVLNNRSYTDT-CLHEFCFLCIKQWSQISSESSPALCK 89
EDDSD D S + +C +CL N + T T C H FC+ C+ +W I S + A+C
Sbjct: 211 GEDDSDTADEHASVSGKCMLCLG--NRKQPTATLCGHIFCWRCLSEW--IKSNTQGAICP 266
Query: 90 MSKQRL 95
++R+
Sbjct: 267 FCRRRI 272
>gi|22122567|ref|NP_666189.1| E3 ubiquitin-protein ligase TRIM31 [Mus musculus]
gi|81901365|sp|Q8R0K2.1|TRI31_MOUSE RecName: Full=E3 ubiquitin-protein ligase TRIM31; AltName:
Full=Tripartite motif-containing protein 31
gi|20071873|gb|AAH26666.1| Tripartite motif-containing 31 [Mus musculus]
gi|26329337|dbj|BAC28407.1| unnamed protein product [Mus musculus]
gi|148691362|gb|EDL23309.1| tripartite motif-containing 31 [Mus musculus]
Length = 507
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 6/71 (8%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRLL-----LFASAT 102
CPIC+ +L + D C H FC CI Q + S + LCK+S + L AS
Sbjct: 16 CPICMEILQDPVTID-CGHNFCLQCISQVGKTSEKIQCPLCKLSVNKNTFRPNKLLASLA 74
Query: 103 ECLQYINVYDI 113
E +Q ++ DI
Sbjct: 75 EKIQSMDPADI 85
>gi|297691619|ref|XP_002823176.1| PREDICTED: protein SCAF11 [Pongo abelii]
Length = 1468
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 6/61 (9%)
Query: 25 KQKNDNPSEDDSDGDRPT----SPTSRCPICL--LVLNNRSYTDTCLHEFCFLCIKQWSQ 78
K+ D E++ D PT S RCPICL L+ + ++C H FC CI +W++
Sbjct: 14 KKYEDMEGEENGDNTIPTGLLYSEADRCPICLNCLIEKEVGFPESCNHVFCMTCILKWAE 73
Query: 79 I 79
Sbjct: 74 T 74
>gi|340052704|emb|CCC46987.1| putative peroxisome assembly protein [Trypanosoma vivax Y486]
Length = 285
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 5/64 (7%)
Query: 33 EDDSDGDRPTSPTSRCPICLLVLNNRSYTDT-CLHEFCFLCIKQWSQISSESSPALCKMS 91
ED +GD S +C +CL N + T T C H FC+ C+ +W I S + ALC +
Sbjct: 204 EDVEEGDEKWSDAGKCMLCLG--NRKQPTATLCGHVFCWRCLSEW--IKSNAPSALCPLC 259
Query: 92 KQRL 95
++++
Sbjct: 260 RRQI 263
>gi|328870930|gb|EGG19302.1| hypothetical protein DFA_02089 [Dictyostelium fasciculatum]
Length = 806
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 20/31 (64%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCIKQWSQ 78
C IC+ V+ + S D C H FCF CI +WS+
Sbjct: 321 CIICVDVVTDESTIDGCSHTFCFECILEWSK 351
>gi|157103793|ref|XP_001648133.1| hypothetical protein AaeL_AAEL003955 [Aedes aegypti]
gi|108880488|gb|EAT44713.1| AAEL003955-PA [Aedes aegypti]
Length = 1823
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Query: 47 RCPICLLVLNNR--SYTDTCLHEFCFLCIKQWSQ 78
+CPICLL L ++ + C H FC CI++WS+
Sbjct: 58 KCPICLLSLTDKEIGVPEVCDHIFCARCIEEWSK 91
>gi|3513737|gb|AAC33953.1| contains similarity to C3HC4-type zinc fingers
(Pfam:zf-C3HC4.hmm, score: 34.87) [Arabidopsis
thaliana]
Length = 118
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 20/33 (60%)
Query: 47 RCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQI 79
RC IC+ ++ +R D C H FCF CI WS I
Sbjct: 30 RCGICMDIIIDRGVLDCCQHWFCFECIDNWSTI 62
>gi|410932353|ref|XP_003979558.1| PREDICTED: protein SCAF11-like, partial [Takifugu rubripes]
Length = 956
Score = 39.7 bits (91), Expect = 0.40, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 6/50 (12%)
Query: 34 DDSDGDRPTSPTSRCPICLLVL--NNRSYTDTCLHEFCFLCIKQWSQISS 81
D +DG+ RCPICL VL + D+C H FC C+ +W+++S+
Sbjct: 13 DATDGEE----AERCPICLGVLPAGELASPDSCCHVFCLGCLLRWAEMSA 58
>gi|290562275|gb|ADD38534.1| Trans-acting transcriptional protein ICP0 [Lepeophtheirus
salmonis]
Length = 112
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Query: 48 CPICLLVL--NNRSYTDTCLHEFCFLCIKQWSQISSE 82
C +CL V NRS+ D CLH +CF C+ +WS++ E
Sbjct: 5 CTVCLEVPPRRNRSFGDPCLHVYCFQCLLEWSKVKKE 41
>gi|270002669|gb|EEZ99116.1| hypothetical protein TcasGA2_TC005009 [Tribolium castaneum]
Length = 1732
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 7/47 (14%)
Query: 34 DDSDGDRPTSPTSRCPICLLVLNNR--SYTDTCLHEFCFLCIKQWSQ 78
D SDG + +CPICL+ N+ ++C H FC CI++WS+
Sbjct: 132 DSSDGQ-----SEKCPICLISFTNQEIGTPESCDHLFCVDCIQEWSK 173
>gi|145354433|ref|XP_001421489.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581726|gb|ABO99782.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 444
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 5/48 (10%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRL 95
C +CL + R D+C H FC CI +W+ I ++ C + K+R
Sbjct: 13 CAVCLAIPEQRGRLDSCCHLFCVPCIVRWASIETK-----CPLCKERF 55
>gi|85687488|gb|ABC73694.1| TRAF6 [Azumapecten farreri]
Length = 655
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Query: 41 PTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSP 85
P CPICLLVL + Y C H FC CIK+W + +ES P
Sbjct: 86 PREDKYDCPICLLVLRD-PYQTECGHRFCQNCIKRWLR-ETESEP 128
>gi|432942122|ref|XP_004082970.1| PREDICTED: uncharacterized protein LOC101154826 [Oryzias latipes]
Length = 695
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 6/48 (12%)
Query: 34 DDSDGDRPTSPTSRCPICLLVLNNR--SYTDTCLHEFCFLCIKQWSQI 79
D SDG+ RCPICL L + D+C H FC C+ W+++
Sbjct: 13 DGSDGEE----AERCPICLGALAGGELAMPDSCCHVFCLGCLLTWAEL 56
>gi|359488305|ref|XP_002279145.2| PREDICTED: uncharacterized protein LOC100256612 [Vitis vinifera]
Length = 503
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 6/74 (8%)
Query: 29 DNPSEDDSDGDR-----PTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWS-QISSE 82
DN + + DGDR PTS C IC ++ C H FC+ CI+ W+ ++S
Sbjct: 329 DNINSEIKDGDRIRQMIPTSANLSCVICWTEFSSTRGVLPCGHRFCYSCIQSWADHMASR 388
Query: 83 SSPALCKMSKQRLL 96
A C + K +
Sbjct: 389 RKTATCPLCKASFV 402
>gi|260826880|ref|XP_002608393.1| hypothetical protein BRAFLDRAFT_95402 [Branchiostoma floridae]
gi|229293744|gb|EEN64403.1| hypothetical protein BRAFLDRAFT_95402 [Branchiostoma floridae]
Length = 629
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 15/73 (20%)
Query: 8 QTQKRRLELPEIQQASKKQKNDNPSEDDSDGDRPTSPTSRCPICLLVLNNR--SYTDTCL 65
+T K++ E P +A+KKQK +E D CPICL L + ++ D C
Sbjct: 395 ETAKKQNERPTTAEATKKQKI--AAEPDC-----------CPICLSELTTQQLAHPDVCR 441
Query: 66 HEFCFLCIKQWSQ 78
H FC C++ W Q
Sbjct: 442 HVFCLGCLQTWQQ 454
>gi|91093064|ref|XP_968013.1| PREDICTED: similar to CG2926 CG2926-PA [Tribolium castaneum]
Length = 1599
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 7/47 (14%)
Query: 34 DDSDGDRPTSPTSRCPICLLVLNNR--SYTDTCLHEFCFLCIKQWSQ 78
D SDG + +CPICL+ N+ ++C H FC CI++WS+
Sbjct: 101 DSSDGQ-----SEKCPICLISFTNQEIGTPESCDHLFCVDCIQEWSK 142
>gi|156358139|ref|XP_001624382.1| predicted protein [Nematostella vectensis]
gi|156211157|gb|EDO32282.1| predicted protein [Nematostella vectensis]
Length = 67
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Query: 44 PTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQI 79
P +C ICL +N+S+ D H FCF CI QWS++
Sbjct: 1 PQDQCSICLCEFDNKSFLDQ-SHAFCFYCILQWSEV 35
>gi|242008670|ref|XP_002425125.1| Peroxisome assembly protein, putative [Pediculus humanus corporis]
gi|212508799|gb|EEB12387.1| Peroxisome assembly protein, putative [Pediculus humanus corporis]
Length = 376
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Query: 37 DGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQ 93
D + T++CP+CL + N S T C H FC+ CI W Q S++ LC+ S Q
Sbjct: 226 DSKEIITVTNKCPLCLNIRKNTSVT-PCGHLFCWSCIISWLQ--SQAKCPLCRQSVQ 279
>gi|297262165|ref|XP_001093788.2| PREDICTED: SFRS2-interacting protein isoform 5 [Macaca mulatta]
Length = 1546
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 6/60 (10%)
Query: 25 KQKNDNPSEDDSDGDRPT----SPTSRCPICL--LVLNNRSYTDTCLHEFCFLCIKQWSQ 78
K+ D E++ D PT S RCPICL L+ + ++C H FC CI +W++
Sbjct: 86 KKYEDMEGEENGDNTVPTGLLYSEADRCPICLNCLLEKEVGFPESCNHVFCMTCILKWAE 145
>gi|357130846|ref|XP_003567055.1| PREDICTED: uncharacterized protein LOC100827572 [Brachypodium
distachyon]
Length = 1232
Score = 39.3 bits (90), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 20/34 (58%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISS 81
C IC ++ NR D C H FC+ CI W+ I++
Sbjct: 31 CGICRDIVINRGVLDCCQHWFCYTCIDNWAAITN 64
>gi|344245155|gb|EGW01259.1| SFRS2-interacting protein [Cricetulus griseus]
Length = 1440
Score = 39.3 bits (90), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Query: 47 RCPICL--LVLNNRSYTDTCLHEFCFLCIKQWSQI 79
RCPICL L+ + ++C H FC CI +WS+I
Sbjct: 39 RCPICLSCLLGKEVGFPESCNHVFCLTCILKWSEI 73
>gi|255084047|ref|XP_002508598.1| hypothetical protein MICPUN_62154 [Micromonas sp. RCC299]
gi|226523875|gb|ACO69856.1| hypothetical protein MICPUN_62154 [Micromonas sp. RCC299]
Length = 725
Score = 39.3 bits (90), Expect = 0.51, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCK 89
C IC + R D C H FC CIK+W++I E+ LCK
Sbjct: 54 CAICRDDVTRRGRIDACDHLFCLPCIKRWAKI--ETKCPLCK 93
>gi|225711856|gb|ACO11774.1| Trans-acting transcriptional protein ICP0 [Lepeophtheirus
salmonis]
gi|225712686|gb|ACO12189.1| Trans-acting transcriptional protein ICP0 [Lepeophtheirus
salmonis]
Length = 114
Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Query: 48 CPICLLV--LNNRSYTDTCLHEFCFLCIKQWSQISSE 82
C +CL V NRS+ D CLH +CF C+ +WS++ E
Sbjct: 5 CTVCLEVPPRRNRSFGDPCLHVYCFQCLLEWSKVKKE 41
>gi|395841722|ref|XP_003793682.1| PREDICTED: protein SCAF11 [Otolemur garnettii]
Length = 1499
Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
Query: 25 KQKNDNPSEDDSDGDRPTSP----TSRCPICL--LVLNNRSYTDTCLHEFCFLCIKQWSQ 78
K+ D E++ D T P RCPICL LV + ++C H FC CI +W++
Sbjct: 53 KEYEDTEGEENRDDIATTGPLYSEADRCPICLNCLVEKEVGFPESCNHVFCMTCILKWAE 112
>gi|159480590|ref|XP_001698365.1| predicted protein [Chlamydomonas reinhardtii]
gi|158282105|gb|EDP07858.1| predicted protein [Chlamydomonas reinhardtii]
Length = 1182
Score = 39.3 bits (90), Expect = 0.51, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRLLLFASATE 103
CPICL V + R+ T TC H FC CI Q + +C+ QR L S E
Sbjct: 942 CPICLDVPDRRTIT-TCGHTFCTDCIHDIVQGKGSAPCPICRAPLQRADLMDSVPE 996
>gi|298204398|emb|CBI16878.3| unnamed protein product [Vitis vinifera]
Length = 475
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 6/74 (8%)
Query: 29 DNPSEDDSDGDR-----PTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWS-QISSE 82
DN + + DGDR PTS C IC ++ C H FC+ CI+ W+ ++S
Sbjct: 301 DNINSEIKDGDRIRQMIPTSANLSCVICWTEFSSTRGVLPCGHRFCYSCIQSWADHMASR 360
Query: 83 SSPALCKMSKQRLL 96
A C + K +
Sbjct: 361 RKTATCPLCKASFV 374
>gi|402885715|ref|XP_003906293.1| PREDICTED: protein SCAF11 [Papio anubis]
Length = 1474
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 6/60 (10%)
Query: 25 KQKNDNPSEDDSDGDRPT----SPTSRCPICL--LVLNNRSYTDTCLHEFCFLCIKQWSQ 78
K+ D E++ D PT S RCPICL L+ + ++C H FC CI +W++
Sbjct: 14 KKYEDMEGEENGDNTVPTGLLYSEADRCPICLNCLLEKEVGFPESCNHVFCMTCILKWAE 73
>gi|392559362|gb|EIW52546.1| hypothetical protein TRAVEDRAFT_40298 [Trametes versicolor
FP-101664 SS1]
Length = 288
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 8/70 (11%)
Query: 12 RRLELPEIQQASKKQKNDNPSE-DDSDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCF 70
+RL+L ++ + P E +D+DG+ C ICL +R+ TC HEFCF
Sbjct: 7 KRLKLDPPSESPNPPEAIEPDELEDTDGEN-------CSICLQPYADRTVIPTCSHEFCF 59
Query: 71 LCIKQWSQIS 80
C+ W++ S
Sbjct: 60 ECLLIWTEQS 69
>gi|380817896|gb|AFE80822.1| protein SCAF11 [Macaca mulatta]
gi|383422769|gb|AFH34598.1| protein SCAF11 [Macaca mulatta]
gi|383422771|gb|AFH34599.1| protein SCAF11 [Macaca mulatta]
gi|383422773|gb|AFH34600.1| protein SCAF11 [Macaca mulatta]
Length = 1464
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 6/61 (9%)
Query: 25 KQKNDNPSEDDSDGDRPT----SPTSRCPICL--LVLNNRSYTDTCLHEFCFLCIKQWSQ 78
K+ D E++ D PT S RCPICL L+ + ++C H FC CI +W++
Sbjct: 14 KKYEDMEGEENGDNTVPTGLLYSEADRCPICLNCLLEKEVGFPESCNHVFCMTCILKWAE 73
Query: 79 I 79
Sbjct: 74 T 74
>gi|358057508|dbj|GAA96506.1| hypothetical protein E5Q_03174 [Mixia osmundae IAM 14324]
Length = 694
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 8/64 (12%)
Query: 18 EIQQASKKQKNDNPSEDDSDGDRPTSPTSRCPICLLVLNNRSYTDTCLH-EFCFLCIKQW 76
+ +Q S ND+ S+ DS + C ICL + NR+ CLH +FCF C+ W
Sbjct: 16 QTEQESTIDTNDSASDGDSADEC-------CAICLSSIENRTVIVQCLHDDFCFACLSTW 68
Query: 77 SQIS 80
Q S
Sbjct: 69 CQQS 72
>gi|355786026|gb|EHH66209.1| Splicing factor, arginine/serine-rich 2-interacting protein
[Macaca fascicularis]
Length = 1464
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 6/61 (9%)
Query: 25 KQKNDNPSEDDSDGDRPT----SPTSRCPICL--LVLNNRSYTDTCLHEFCFLCIKQWSQ 78
K+ D E++ D PT S RCPICL L+ + ++C H FC CI +W++
Sbjct: 14 KKYEDMEGEENGDNTVPTGLLYSEADRCPICLNCLLEKEVGFPESCNHVFCMTCILKWAE 73
Query: 79 I 79
Sbjct: 74 T 74
>gi|356574973|ref|XP_003555617.1| PREDICTED: uncharacterized protein LOC100797448 [Glycine max]
Length = 813
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 8/71 (11%)
Query: 48 CPICLLVLNNR---SYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRLLLFASATEC 104
C ICL + R + C H FCF CI +W+++ S C + KQR +
Sbjct: 362 CGICLSEEDKRRVRGVLNCCTHFFCFACIMEWAKVESR-----CPLCKQRFKAISKPARS 416
Query: 105 LQYINVYDIMI 115
I++ +++I
Sbjct: 417 TTGIDLREVVI 427
>gi|348521922|ref|XP_003448475.1| PREDICTED: filamin-B-like [Oreochromis niloticus]
Length = 901
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCIKQ-WSQISSESSPALCKMSKQRLL 96
CP+C + + + TC H FC +C+K W+Q + P K+SKQR L
Sbjct: 11 CPVCHDIFRDPVFL-TCSHSFCKMCLKHWWAQKKQQQCPVCKKISKQRDL 59
>gi|296211398|ref|XP_002752394.1| PREDICTED: protein SCAF11 [Callithrix jacchus]
Length = 1463
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 6/60 (10%)
Query: 25 KQKNDNPSEDDSDGDRPT----SPTSRCPICL--LVLNNRSYTDTCLHEFCFLCIKQWSQ 78
K+ D E++ D PT S RCPICL L+ + ++C H FC CI +W++
Sbjct: 14 KKYEDMEGEENGDNTVPTGLLYSEADRCPICLNCLLEKEVGFPESCNHVFCMTCILKWAE 73
>gi|158289753|ref|XP_311414.4| AGAP010697-PA [Anopheles gambiae str. PEST]
gi|157018478|gb|EAA06992.4| AGAP010697-PA [Anopheles gambiae str. PEST]
Length = 2062
Score = 39.3 bits (90), Expect = 0.58, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 23/34 (67%), Gaps = 2/34 (5%)
Query: 47 RCPICLLVLNNRS--YTDTCLHEFCFLCIKQWSQ 78
+CPICLL L+N+ + C H FC CI++WS+
Sbjct: 15 KCPICLLSLHNQEVGVPEVCEHVFCAPCIEEWSR 48
>gi|409074445|gb|EKM74843.1| hypothetical protein AGABI1DRAFT_132816 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 689
Score = 39.3 bits (90), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 29/64 (45%)
Query: 14 LELPEIQQASKKQKNDNPSEDDSDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCI 73
L+ P +KK K D+ D + C ICL + +R+ C HEFCF C+
Sbjct: 2 LDSPPASPPAKKAKLTEEEPVDTPEDPEDDSENHCSICLQAMEDRTVIPHCSHEFCFDCL 61
Query: 74 KQWS 77
W+
Sbjct: 62 MIWT 65
>gi|147789462|emb|CAN77823.1| hypothetical protein VITISV_043444 [Vitis vinifera]
Length = 321
Score = 38.9 bits (89), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Query: 41 PTSPTSRCPICL-LVLNNRSYTDT-CLHEFCFLCIKQWSQI 79
P CPICL V++ R+ T CLH +CF CI++WS +
Sbjct: 33 PAIEGKSCPICLSHVVDRRAAVITACLHAYCFRCIRRWSDL 73
>gi|226503711|ref|NP_001152482.1| ubiquitin ligase protein COP1 [Zea mays]
gi|195656705|gb|ACG47820.1| ubiquitin ligase protein COP1 [Zea mays]
Length = 693
Score = 38.9 bits (89), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 16 LPEIQQASKKQKNDNPSEDDSDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCI 73
+PE +A + + +P +G+ P CPIC+ V+ + ++ C H FC++CI
Sbjct: 38 MPE--EAGMRAASASPQGPAEEGEGPADRDLLCPICMAVIKD-AFLTACGHSFCYMCI 92
>gi|225432354|ref|XP_002276564.1| PREDICTED: E3 ubiquitin-protein ligase Topors-like [Vitis
vinifera]
Length = 294
Score = 38.9 bits (89), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Query: 41 PTSPTSRCPICL-LVLNNRSYTDT-CLHEFCFLCIKQWSQI 79
P CPICL V++ R+ T CLH +CF CI++WS +
Sbjct: 35 PAIEGKSCPICLSHVVDRRAAVITACLHAYCFRCIRRWSDL 75
>gi|196008741|ref|XP_002114236.1| hypothetical protein TRIADDRAFT_57833 [Trichoplax adhaerens]
gi|190583255|gb|EDV23326.1| hypothetical protein TRIADDRAFT_57833 [Trichoplax adhaerens]
Length = 257
Score = 38.9 bits (89), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Query: 17 PEIQQASKKQKNDNPSEDDSDGDRPTSP------TSRCPICLLVLNNRSYTDT-CLHEFC 69
P + A ++ ++ + D S+G R P SRCPIC +L+ R+ +T C H FC
Sbjct: 50 PSQEHAVEQARSFLSNSDHSEGIRNGRPRVSYNADSRCPIC--ILDPRAPVETNCGHIFC 107
Query: 70 FLCIKQWSQISSESSPALCKMSKQRLLLF 98
CI + + S P C + +Q + +
Sbjct: 108 AECIITYWKHGSWLGPMNCPICRQEITIL 136
>gi|386522787|ref|YP_006273043.1| ORF63 gene product [Equid herpesvirus 8]
gi|384929844|gb|AFI33199.1| ubiquitin E3 ligase ICP0 [Equid herpesvirus 8]
Length = 540
Score = 38.9 bits (89), Expect = 0.64, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Query: 47 RCPICLL-VLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKM 90
RCPICL +N S CLH FC++CI +W I + LCK+
Sbjct: 7 RCPICLEDPPSNYSMALPCLHAFCYVCITRW--IRQNPTCPLCKV 49
>gi|413939110|gb|AFW73661.1| ubiquitin ligase protein COP1 [Zea mays]
Length = 693
Score = 38.9 bits (89), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 16 LPEIQQASKKQKNDNPSEDDSDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCI 73
+PE +A + + +P +G+ P CPIC+ V+ + ++ C H FC++CI
Sbjct: 38 MPE--EAGMRAASASPQGPAEEGEGPADRDLLCPICMAVIKD-AFLTACGHSFCYMCI 92
>gi|125604082|gb|EAZ43407.1| hypothetical protein OsJ_28012 [Oryza sativa Japonica Group]
Length = 314
Score = 38.9 bits (89), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 17 PEIQQASKKQKNDNPSEDDSDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQW 76
P+ ++ + K KN + P PT CP+CL L+ S T+ C H FC CI+ W
Sbjct: 225 PDREEGTSKPKNVAQTSTTHAKVAPKEPTFTCPVCLNKLDKPSTTN-CGHIFCEKCIQAW 283
>gi|302762535|ref|XP_002964689.1| hypothetical protein SELMODRAFT_438965 [Selaginella
moellendorffii]
gi|300166922|gb|EFJ33527.1| hypothetical protein SELMODRAFT_438965 [Selaginella
moellendorffii]
Length = 1906
Score = 38.9 bits (89), Expect = 0.67, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 5/48 (10%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRL 95
C IC ++ R D C H FCF CI+ W+ +++ LC M K +
Sbjct: 8 CGICDAIVVERGLLDCCDHMFCFSCIEDWATVTN-----LCPMCKAQF 50
>gi|332206454|ref|XP_003252308.1| PREDICTED: protein SCAF11 [Nomascus leucogenys]
Length = 1463
Score = 38.9 bits (89), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 6/61 (9%)
Query: 25 KQKNDNPSEDDSDGDRPT----SPTSRCPICL--LVLNNRSYTDTCLHEFCFLCIKQWSQ 78
K+ D E++ D PT S RCPICL L+ + ++C H FC CI +W++
Sbjct: 14 KKYEDMEGEENGDNTIPTGLLYSEADRCPICLNCLLEKEVGFPESCNHVFCMTCILKWAE 73
Query: 79 I 79
Sbjct: 74 T 74
>gi|115395070|ref|XP_001213484.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114193053|gb|EAU34753.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 372
Score = 38.9 bits (89), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 6/57 (10%)
Query: 41 PTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRLLL 97
P+ S+C +CL + S T TC H FC++C++ W + E C + +Q +LL
Sbjct: 314 PSGQQSKCTLCLETFKDPSVT-TCGHVFCWICVRDWVREKPE-----CPLCRQEVLL 364
>gi|348505986|ref|XP_003440541.1| PREDICTED: PHD and RING finger domain-containing protein 1-like
[Oreochromis niloticus]
Length = 1068
Score = 38.9 bits (89), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 2/34 (5%)
Query: 47 RCPICLLVLNNR--SYTDTCLHEFCFLCIKQWSQ 78
+CPICL LN++ + + C H FCF CI +W++
Sbjct: 103 KCPICLNSLNSQPVATPENCEHYFCFDCILEWAK 136
>gi|297736896|emb|CBI26097.3| unnamed protein product [Vitis vinifera]
Length = 308
Score = 38.9 bits (89), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Query: 41 PTSPTSRCPICL-LVLNNRSYTDT-CLHEFCFLCIKQWSQI 79
P CPICL V++ R+ T CLH +CF CI++WS +
Sbjct: 3 PAIEGKSCPICLSHVVDRRAAVITACLHAYCFRCIRRWSDL 43
>gi|108862321|gb|ABA96698.2| expressed protein [Oryza sativa Japonica Group]
Length = 1196
Score = 38.9 bits (89), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 20/34 (58%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISS 81
C IC ++ +R D C H FC+ CI WS I++
Sbjct: 33 CGICRDIVIDRGVLDCCQHWFCYTCIDNWSAITN 66
>gi|297612845|ref|NP_001066395.2| Os12g0209700 [Oryza sativa Japonica Group]
gi|255670141|dbj|BAF29414.2| Os12g0209700 [Oryza sativa Japonica Group]
Length = 1222
Score = 38.9 bits (89), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 20/34 (58%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISS 81
C IC ++ +R D C H FC+ CI WS I++
Sbjct: 33 CGICRDIVIDRGVLDCCQHWFCYTCIDNWSAITN 66
>gi|449450666|ref|XP_004143083.1| PREDICTED: E3 ubiquitin-protein ligase Topors-like [Cucumis
sativus]
Length = 288
Score = 38.9 bits (89), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Query: 48 CPICLLVLNNRSYT--DTCLHEFCFLCIKQWSQI 79
CPICL L +R+ TC+H +C CI++WS +
Sbjct: 33 CPICLRELEDRTAAVLTTCIHAYCISCIRKWSNL 66
>gi|358335657|dbj|GAA54305.1| PHD and RING finger domain-containing protein 1 [Clonorchis
sinensis]
Length = 844
Score = 38.9 bits (89), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 45 TSRCPICLLVLNNRSYT-DTCLHEFCFLCIKQWSQISSE 82
+++CPIC L T ++C H FC++C+++WS++ E
Sbjct: 110 SNQCPICCEALQKPIATPESCNHTFCYVCLREWSRVRHE 148
>gi|330800916|ref|XP_003288478.1| hypothetical protein DICPUDRAFT_152708 [Dictyostelium purpureum]
gi|325081490|gb|EGC35004.1| hypothetical protein DICPUDRAFT_152708 [Dictyostelium purpureum]
Length = 527
Score = 38.9 bits (89), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 34 DDSDGDRPTSPTSRCPICLLVLN-NRSYTDTCLHEFCFLCIKQWSQ 78
D+ + DR S +C ICL ++N N T C H+FC+ CI +WS+
Sbjct: 420 DNLESDRSES-DDKCTICLNIININEMATIDCHHKFCYECIVKWSE 464
>gi|449524840|ref|XP_004169429.1| PREDICTED: E3 ubiquitin-protein ligase Topors-like [Cucumis
sativus]
Length = 288
Score = 38.9 bits (89), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Query: 48 CPICLLVLNNRSYT--DTCLHEFCFLCIKQWSQI 79
CPICL L +R+ TC+H +C CI++WS +
Sbjct: 33 CPICLRELEDRTAAVLTTCIHAYCISCIRKWSNL 66
>gi|222616802|gb|EEE52934.1| hypothetical protein OsJ_35565 [Oryza sativa Japonica Group]
Length = 1268
Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 20/34 (58%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISS 81
C IC ++ +R D C H FC+ CI WS I++
Sbjct: 33 CGICRDIVIDRGVLDCCQHWFCYTCIDNWSAITN 66
>gi|407971937|gb|AFU52971.1| tumor necrosis factor receptor-associated factor 6 [Mizuhopecten
yessoensis]
Length = 657
Score = 38.9 bits (89), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Query: 41 PTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSP 85
P CPICLLVL Y C H FC CIK+W + +ES P
Sbjct: 88 PREDKYDCPICLLVLR-EPYQTECGHRFCQNCIKRWLR-ETESEP 130
>gi|37360620|dbj|BAC98288.1| mKIAA3013 protein [Mus musculus]
Length = 1461
Score = 38.5 bits (88), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Query: 43 SPTSRCPICL--LVLNNRSYTDTCLHEFCFLCIKQWSQI 79
S RCPICL L+ + ++C H FC CI +W++I
Sbjct: 63 SEADRCPICLSCLLGKEVGFPESCNHVFCMACILKWAEI 101
>gi|403301700|ref|XP_003941522.1| PREDICTED: protein SCAF11 [Saimiri boliviensis boliviensis]
Length = 1463
Score = 38.5 bits (88), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 6/60 (10%)
Query: 25 KQKNDNPSEDDSDGDRPT----SPTSRCPICL--LVLNNRSYTDTCLHEFCFLCIKQWSQ 78
K+ D E++ D PT S RCPICL L+ + ++C H FC CI +W++
Sbjct: 14 KKYEDMEGEENRDNTVPTGLLYSEADRCPICLNCLLEKEVGFPESCNHVFCMTCILKWAE 73
>gi|358056905|dbj|GAA97255.1| hypothetical protein E5Q_03932 [Mixia osmundae IAM 14324]
Length = 1602
Score = 38.5 bits (88), Expect = 0.83, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 26/54 (48%)
Query: 38 GDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMS 91
G+ P C IC+ V R+ +C H +C C K W+Q SS + C+ +
Sbjct: 1251 GEEDDEPDQSCQICMDVPQGRAVLTSCGHVYCATCWKLWAQHSSIVTCPCCRKT 1304
>gi|345792209|ref|XP_534828.3| PREDICTED: protein SCAF11 [Canis lupus familiaris]
Length = 1459
Score = 38.5 bits (88), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Query: 43 SPTSRCPICL--LVLNNRSYTDTCLHEFCFLCIKQWSQI 79
S RCPICL L+ + ++C H FC CI +W++I
Sbjct: 36 SEADRCPICLNCLLEKEVGFPESCNHVFCMTCILKWAEI 74
>gi|355718918|gb|AES06430.1| splicing factor, arginine/serine-rich 2, interacting protein
[Mustela putorius furo]
Length = 1457
Score = 38.5 bits (88), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Query: 43 SPTSRCPICL--LVLNNRSYTDTCLHEFCFLCIKQWSQI 79
S RCPICL L+ + ++C H FC CI +W++I
Sbjct: 36 SEADRCPICLNCLLEKEVGFPESCNHVFCMTCILKWAEI 74
>gi|410964181|ref|XP_003988634.1| PREDICTED: protein SCAF11 [Felis catus]
Length = 1462
Score = 38.5 bits (88), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Query: 43 SPTSRCPICL--LVLNNRSYTDTCLHEFCFLCIKQWSQI 79
S RCPICL L+ + ++C H FC CI +W++I
Sbjct: 36 SEADRCPICLNCLLEKEVGFPESCNHVFCMTCILKWAEI 74
>gi|358253299|dbj|GAA52768.1| E3 ubiquitin-protein ligase CHIP [Clonorchis sinensis]
Length = 1956
Score = 38.5 bits (88), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 29/60 (48%), Gaps = 8/60 (13%)
Query: 37 DGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRLL 96
DGD C ICL NRS C+H FCF CI +W I+ S LCK R++
Sbjct: 599 DGD------DECVICLDPKANRSIVLPCMHTFCFECIYRWLCIN--PSCPLCKRLAHRII 650
>gi|301783597|ref|XP_002927215.1| PREDICTED: SFRS2-interacting protein-like [Ailuropoda
melanoleuca]
Length = 1460
Score = 38.5 bits (88), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Query: 43 SPTSRCPICL--LVLNNRSYTDTCLHEFCFLCIKQWSQI 79
S RCPICL L+ + ++C H FC CI +W++I
Sbjct: 36 SEADRCPICLNCLLEKEVGFPESCNHVFCMTCILKWAEI 74
>gi|167997059|ref|XP_001751236.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162697217|gb|EDQ83553.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 708
Score = 38.5 bits (88), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 6/52 (11%)
Query: 48 CPICLLVLN-NRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRLLLF 98
C ICL R D C H FCF CI +WS++ S C + KQR +
Sbjct: 73 CGICLTEEEVGRGKLDCCDHYFCFGCIMEWSKVESR-----CPICKQRFVTI 119
>gi|299116507|emb|CBN76221.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 807
Score = 38.5 bits (88), Expect = 0.87, Method: Composition-based stats.
Identities = 29/91 (31%), Positives = 37/91 (40%), Gaps = 17/91 (18%)
Query: 19 IQQASKKQKNDNPSEDDSDGDRPTSPTSRCPIC--LLVLNNRSYTDTCLHEFCFLCIKQW 76
+ A + K NP + D +RCPIC LL NR C H FC C+ QW
Sbjct: 36 VNAAHPRTKRKNPEKVDD--------KARCPICQDLLPEENRGIV-KCGHVFCLKCVLQW 86
Query: 77 SQISSESSPA----LCKMSKQRLLLFASATE 103
+ S P +C + K L A A E
Sbjct: 87 VKKQQNSCPTCRAKVCHIKKT--LSLAEALE 115
>gi|42407630|dbj|BAD08744.1| unknown protein [Oryza sativa Japonica Group]
gi|42761408|dbj|BAD11573.1| unknown protein [Oryza sativa Japonica Group]
Length = 449
Score = 38.5 bits (88), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 17 PEIQQASKKQKNDNPSEDDSDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQW 76
P+ ++ + K KN + P PT CP+CL L+ S T+ C H FC CI+ W
Sbjct: 360 PDREEGTSKPKNVAQTSTTHAKVAPKEPTFTCPVCLNKLDKPSTTN-CGHIFCEKCIQAW 418
>gi|148672294|gb|EDL04241.1| splicing factor, arginine/serine-rich 2, interacting protein,
isoform CRA_a [Mus musculus]
Length = 1463
Score = 38.5 bits (88), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Query: 43 SPTSRCPICL--LVLNNRSYTDTCLHEFCFLCIKQWSQI 79
S RCPICL L+ + ++C H FC CI +W++I
Sbjct: 43 SEADRCPICLSCLLGKEVGFPESCNHVFCMACILKWAEI 81
>gi|148672295|gb|EDL04242.1| splicing factor, arginine/serine-rich 2, interacting protein,
isoform CRA_b [Mus musculus]
Length = 1462
Score = 38.5 bits (88), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Query: 43 SPTSRCPICL--LVLNNRSYTDTCLHEFCFLCIKQWSQI 79
S RCPICL L+ + ++C H FC CI +W++I
Sbjct: 36 SEADRCPICLSCLLGKEVGFPESCNHVFCMACILKWAEI 74
>gi|324502906|gb|ADY41271.1| E3 ubiquitin-protein ligase Topor [Ascaris suum]
Length = 1034
Score = 38.5 bits (88), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 51/117 (43%), Gaps = 18/117 (15%)
Query: 36 SDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRL 95
SDG P CPICL + + D+C H FCF I +W IS +CK S +++
Sbjct: 94 SDGGDP------CPICLRRCEDEAKLDSCSHRFCFGHICEW--ISLNPVCPMCKRSVRKI 145
Query: 96 L---LFASATECLQYINVYDIMILQVNTSTFKGLFGVNIGRID---RLHLFTFGHFQ 146
+ A + + + V D+ N + + + ++ +D R LF H Q
Sbjct: 146 MHNIRGVGANQICEEVTVEDLR----NAAEIRRIASGSLQPMDSERREVLFMIRHLQ 198
>gi|145521452|ref|XP_001446581.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124414059|emb|CAK79184.1| unnamed protein product [Paramecium tetraurelia]
Length = 135
Score = 38.5 bits (88), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 13/58 (22%)
Query: 21 QASKKQKNDNPSEDDSDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQ 78
QA KK N+ P ED C IC + ++ TC H +CF CI+ W++
Sbjct: 28 QAKKKVSNEEPPED-------------CSICYQEIIDKGIIQTCKHSYCFKCIEVWAK 72
>gi|117647277|ref|NP_082424.2| splicing factor, arginine/serine-rich 2, interacting protein [Mus
musculus]
Length = 1456
Score = 38.5 bits (88), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Query: 43 SPTSRCPICL--LVLNNRSYTDTCLHEFCFLCIKQWSQI 79
S RCPICL L+ + ++C H FC CI +W++I
Sbjct: 36 SEADRCPICLSCLLGKEVGFPESCNHVFCMACILKWAEI 74
>gi|403224969|ref|NP_001258099.1| SFRS2-interacting protein [Rattus norvegicus]
Length = 1440
Score = 38.5 bits (88), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Query: 47 RCPICL--LVLNNRSYTDTCLHEFCFLCIKQWSQI 79
RCPICL L+ + ++C H FC CI +W++I
Sbjct: 40 RCPICLSCLLGKEVGFPESCNHVFCMACILKWAEI 74
>gi|324502814|gb|ADY41235.1| E3 ubiquitin-protein ligase Topor [Ascaris suum]
Length = 1007
Score = 38.5 bits (88), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 51/117 (43%), Gaps = 18/117 (15%)
Query: 36 SDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRL 95
SDG P CPICL + + D+C H FCF I +W IS +CK S +++
Sbjct: 94 SDGGDP------CPICLRRCEDEAKLDSCSHRFCFGHICEW--ISLNPVCPMCKRSVRKI 145
Query: 96 L---LFASATECLQYINVYDIMILQVNTSTFKGLFGVNIGRID---RLHLFTFGHFQ 146
+ A + + + V D+ N + + + ++ +D R LF H Q
Sbjct: 146 MHNIRGVGANQICEEVTVEDLR----NAAEIRRIASGSLQPMDSERREVLFMIRHLQ 198
>gi|330845287|ref|XP_003294524.1| hypothetical protein DICPUDRAFT_159532 [Dictyostelium purpureum]
gi|325075003|gb|EGC28954.1| hypothetical protein DICPUDRAFT_159532 [Dictyostelium purpureum]
Length = 433
Score = 38.5 bits (88), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 10/92 (10%)
Query: 45 TSRCPICLLVLN--NRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRLLLFASAT 102
+ C IC + LN N S + C H FC CI++W ++++ + P LC R F
Sbjct: 289 NNECCICYIKLNTTNTSTIEVCSHTFCNECIRKWCKLNNNTCP-LC-----RKFFFFIQR 342
Query: 103 ECLQYINVYDIMI--LQVNTSTFKGLFGVNIG 132
E ++++D+ + L+ + G N G
Sbjct: 343 EGQVKVSIFDVKLEPLEQANESVNGSNDNNSG 374
>gi|149032209|gb|EDL87121.1| rCG50794, isoform CRA_a [Rattus norvegicus]
Length = 1424
Score = 38.5 bits (88), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Query: 47 RCPICL--LVLNNRSYTDTCLHEFCFLCIKQWSQI 79
RCPICL L+ + ++C H FC CI +W++I
Sbjct: 40 RCPICLSCLLGKEVGFPESCNHVFCMACILKWAEI 74
>gi|351713426|gb|EHB16345.1| PHD and RING finger domain-containing protein 1, partial
[Heterocephalus glaber]
Length = 1602
Score = 38.5 bits (88), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Query: 48 CPICLLVLNNRSY--TDTCLHEFCFLCIKQWSQ 78
CPICL V +++ +TC H FC CI +WS+
Sbjct: 38 CPICLNVFRDQAVGTPETCTHYFCLDCIVEWSK 70
>gi|19075245|ref|NP_587745.1| ubiquitin-protein ligase E3 (predicted) [Schizosaccharomyces pombe
972h-]
gi|74638645|sp|Q9P3U8.1|YJ95_SCHPO RecName: Full=Uncharacterized RING finger protein C548.05c
gi|8670896|emb|CAB94947.1| ubiquitin-protein ligase E3 (predicted) [Schizosaccharomyces pombe]
Length = 468
Score = 38.5 bits (88), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 47/110 (42%), Gaps = 12/110 (10%)
Query: 45 TSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRLLLFASATEC 104
T CPIC L R +T C H +C+ C+ W + S C +Q+L S
Sbjct: 82 TLECPICTEALQ-RPFTTHCGHTYCYECLLNWLKESKS-----CPTCRQKLYTQPSPA-- 133
Query: 105 LQYINVYDIMILQVNTSTFKGLFGVNIGRIDRLHLFTF-GHFQSRKTRVP 153
Y+ VY+IM + +++ L G+N + F G F+ + P
Sbjct: 134 --YL-VYEIMNVVAASNSGFPLVGINENPAKKQKEVLFDGMFKQEDSHYP 180
>gi|449506830|ref|XP_002189161.2| PREDICTED: E3 ubiquitin-protein ligase DTX3L [Taeniopygia guttata]
Length = 295
Score = 38.5 bits (88), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 27/54 (50%)
Query: 20 QQASKKQKNDNPSEDDSDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCI 73
+++S +QKN+ SE + CPIC + N+ + C H FC +CI
Sbjct: 88 KKSSVRQKNNLSSEGQTQAKTEEKEDDECPICRDTIENKEILERCKHAFCKICI 141
>gi|440793999|gb|ELR15170.1| peptidase family m1 domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 1226
Score = 38.5 bits (88), Expect = 0.94, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 5/40 (12%)
Query: 64 CLHEFCFLCIKQWSQISSESSPALCKMSKQRLLLFASATE 103
C H FCF+CI+QW+ +++ +C + K R +TE
Sbjct: 852 CTHHFCFVCIEQWATVAT-----VCPLCKTRFTSLLRSTE 886
>gi|320163477|gb|EFW40376.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
Length = 406
Score = 38.5 bits (88), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 10/57 (17%)
Query: 27 KNDNPSEDDSDGDR-------PTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQW 76
+ +NP E D + DR P S S+C +CL N + T C H FC+ CI +W
Sbjct: 320 QTENPVESDDENDRGDEDDDIPAS--SKCSLCLAARENPTVT-PCGHLFCWKCIAEW 373
>gi|145353061|ref|XP_001420848.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581083|gb|ABO99141.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 273
Score = 38.5 bits (88), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 11/72 (15%)
Query: 31 PSEDDSDGDRPTSPTSRCPICLLVLNNR--SYTDTCLHEFCFLCIKQWSQISSESSPA-- 86
P +DD+ SPT C +CL + R + CLH FC C+ +W++ + +
Sbjct: 6 PDDDDAR----ASPT--CAVCLARPDARDVALVVACLHAFCASCVTKWAEFTRAGARTRC 59
Query: 87 -LCKMSKQRLLL 97
LC+ S +R+L+
Sbjct: 60 PLCQASCERVLV 71
>gi|395329514|gb|EJF61900.1| hypothetical protein DICSQDRAFT_154801, partial [Dichomitus
squalens LYAD-421 SS1]
Length = 340
Score = 38.5 bits (88), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 20/34 (58%)
Query: 47 RCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQIS 80
RC ICL +R+ TC HEFCF C+ W+ S
Sbjct: 40 RCSICLQPYADRTMIPTCSHEFCFECLLIWTDQS 73
>gi|403335250|gb|EJY66800.1| Zinc finger (C3HC4 RING finger) protein, putative [Oxytricha
trifallax]
Length = 642
Score = 38.5 bits (88), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 45/101 (44%), Gaps = 7/101 (6%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRLLLFASATECLQY 107
CP+CL +L + CLH+FC CI+ ++++ + P K R LL + Y
Sbjct: 100 CPVCLDILKDPLNVKMCLHKFCAHCIENYNRLIKKQCPQCRKYIGSRRLLRSD------Y 153
Query: 108 INVYDIMILQVNTSTFKGLFGVNIGRIDRLHLFTFGHFQSR 148
Y I L + F F + + +F F +F+++
Sbjct: 154 KLAYIIKALITDIDAF-NKFEEQARKEEVPKIFDFNNFKNK 193
>gi|168014304|ref|XP_001759692.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689231|gb|EDQ75604.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 776
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 24/52 (46%), Gaps = 6/52 (11%)
Query: 48 CPICLLVLN-NRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRLLLF 98
C ICL R D C H FCF CI +WS++ S C KQR L
Sbjct: 148 CGICLTEEEAERGKLDCCDHYFCFGCIMEWSKVESR-----CPSCKQRFLTI 194
>gi|328876163|gb|EGG24526.1| hypothetical protein DFA_02769 [Dictyostelium fasciculatum]
Length = 304
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 24/34 (70%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISS 81
C ICL ++++++ D C H FCF C+ +WS+ ++
Sbjct: 171 CGICLDIVDDKAKPDGCRHIFCFECLHRWSKTAT 204
>gi|296805509|ref|XP_002843579.1| peroxisome assembly protein 10 [Arthroderma otae CBS 113480]
gi|238844881|gb|EEQ34543.1| peroxisome assembly protein 10 [Arthroderma otae CBS 113480]
Length = 372
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 6/56 (10%)
Query: 41 PTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRLL 96
PT P +C +CL + S + TC H FC+ CI+ W Q E C + +Q L
Sbjct: 314 PTGPQRKCTLCLDPFKDPSVS-TCGHVFCWACIRDWVQEKPE-----CPLCRQEAL 363
>gi|119587190|gb|EAW66786.1| ring finger protein 166, isoform CRA_e [Homo sapiens]
Length = 180
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Query: 22 ASKKQKNDNPSEDDSDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISS 81
AS +Q+ P + GD CPICL V + +C H FC C++ Q+ S
Sbjct: 7 ASAQQRQ--PPAGPAGGDSGLEAQYTCPICLEVYHRPVAIGSCGHTFCGECLQPCLQVPS 64
Query: 82 ESSPALCKMS 91
P LC+++
Sbjct: 65 PLCP-LCRLA 73
>gi|308812053|ref|XP_003083334.1| Chromatin remodeling complex WSTF-ISWI, large subunit (contains
heterochromatin localization, PHD and BROMO domains)
(ISS) [Ostreococcus tauri]
gi|116055214|emb|CAL57610.1| Chromatin remodeling complex WSTF-ISWI, large subunit (contains
heterochromatin localization, PHD and BROMO domains)
(ISS) [Ostreococcus tauri]
Length = 399
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKM 90
C +CL + R+ D+C H FC C+ +W+++ E+ LCK+
Sbjct: 12 CAVCLTHPDTRAALDSCSHVFCVPCLSRWAKV--ETRCPLCKL 52
>gi|453082160|gb|EMF10208.1| hypothetical protein SEPMUDRAFT_119925 [Mycosphaerella populorum
SO2202]
Length = 132
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 6/67 (8%)
Query: 44 PTSRCPICL-LVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRLLLFASAT 102
P+ CPIC +L + + C H FC C+ QW SS LC + +Q L F A
Sbjct: 10 PSEECPICFEPLLISCAIRTPCGHRFCRRCLDQWWDRSS-----LCPLCRQPLFQFPPAH 64
Query: 103 ECLQYIN 109
L+Y++
Sbjct: 65 AYLRYVS 71
>gi|378731134|gb|EHY57593.1| hypothetical protein HMPREF1120_05622 [Exophiala dermatitidis
NIH/UT8656]
Length = 301
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 38/89 (42%), Gaps = 7/89 (7%)
Query: 15 ELPEIQQASKKQKNDNPSEDDSDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIK 74
ELP Q +++ D +D D D CPIC L+L R C H C C+
Sbjct: 9 ELPHQDQNARRGVPDAAHNEDIDLD------DLCPICHLLLY-RPVRTRCNHTLCESCMA 61
Query: 75 QWSQISSESSPALCKMSKQRLLLFASATE 103
W+ +S S A + + ++L + E
Sbjct: 62 HWADVSITSQMATVGLDDEAVVLLPNEIE 90
>gi|405951022|gb|EKC18970.1| TNF receptor-associated factor 3 [Crassostrea gigas]
Length = 603
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSP 85
CPICLLVL + T TC H FC CI +W + S + P
Sbjct: 55 CPICLLVLRDPLQT-TCGHRFCKNCINKWLKESDQRCP 91
>gi|284009784|ref|NP_001165007.1| nuclear factor 7, brain [Xenopus (Silurana) tropicalis]
gi|183985957|gb|AAI66279.1| Unknown (protein for MGC:185544) [Xenopus (Silurana) tropicalis]
Length = 648
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 30/90 (33%), Positives = 42/90 (46%), Gaps = 9/90 (10%)
Query: 7 RQTQKRRLELPEIQ----QASKKQKNDNPSEDDSDGDRPTSPTSRCPICLLVLNNRSYTD 62
+ QKR+LE PE + + +K + N S + GD T CP+C+ + +
Sbjct: 141 KTPQKRKLEEPEPEPKKAKVEEKDASKNASTLGAAGDFAEELT--CPLCMELFKDPVMV- 197
Query: 63 TCLHEFCFLCI-KQWSQISSESSPALCKMS 91
C H FC CI K W SS + P CK S
Sbjct: 198 ACGHNFCRSCIDKAWEGQSSFACPE-CKES 226
>gi|7671466|emb|CAB89406.1| putative protein [Arabidopsis thaliana]
Length = 1751
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Query: 18 EIQQASKKQKNDNPSEDDSDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWS 77
E++Q +K N+ E + G++P CPICL +++ + C H FC C+ +
Sbjct: 1534 EMRQEVQKMVNELAREKSALGEKPDEIEVECPICLSEVDDGYSLEGCSHLFCKACLLEQF 1593
Query: 78 QISS---ESSPALC 88
+ S ++ P LC
Sbjct: 1594 EASMRNFDAFPILC 1607
>gi|77927306|gb|ABB05506.1| PEX10, partial [Trypanosoma brucei]
Length = 298
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 6/66 (9%)
Query: 32 SEDDSD-GDRPTSPTSRCPICLLVLNNRSYTDT-CLHEFCFLCIKQWSQISSESSPALCK 89
EDDSD D S + +C +CL N + T T C H FC+ C+ +W I S + A+C
Sbjct: 211 GEDDSDTADEHASVSGKCMLCLG--NRKQPTATLCGHIFCWRCLSEW--IKSNTQGAICP 266
Query: 90 MSKQRL 95
++++
Sbjct: 267 FCRRQI 272
>gi|348551031|ref|XP_003461334.1| PREDICTED: PHD and RING finger domain-containing protein 1-like
[Cavia porcellus]
Length = 1653
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Query: 48 CPICLLVLNNRSY--TDTCLHEFCFLCIKQWSQ 78
CPICL V +++ +TC H FC CI +WS+
Sbjct: 109 CPICLNVFRDQAVGTPETCAHYFCLDCIVEWSR 141
>gi|255542832|ref|XP_002512479.1| splicing factor, arginine/serine-rich 2,rnap interacting protein,
putative [Ricinus communis]
gi|223548440|gb|EEF49931.1| splicing factor, arginine/serine-rich 2,rnap interacting protein,
putative [Ricinus communis]
Length = 791
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 8/51 (15%)
Query: 48 CPICLLVLNNR---SYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRL 95
C ICL + R D C H FCF CI +WS++ S C + KQR
Sbjct: 308 CGICLSEEDKRRLRGTLDCCSHYFCFTCIMEWSKVESR-----CPLCKQRF 353
>gi|30683133|ref|NP_196599.2| helicase , IBR and zinc finger protein domain-containing protein
[Arabidopsis thaliana]
gi|332004150|gb|AED91533.1| helicase , IBR and zinc finger protein domain-containing protein
[Arabidopsis thaliana]
Length = 1775
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Query: 18 EIQQASKKQKNDNPSEDDSDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWS 77
E++Q +K N+ E + G++P CPICL +++ + C H FC C+ +
Sbjct: 1534 EMRQEVQKMVNELAREKSALGEKPDEIEVECPICLSEVDDGYSLEGCSHLFCKACLLEQF 1593
Query: 78 QISS---ESSPALC 88
+ S ++ P LC
Sbjct: 1594 EASMRNFDAFPILC 1607
>gi|345496896|ref|XP_001600825.2| PREDICTED: hypothetical protein LOC100116294 [Nasonia vitripennis]
Length = 3272
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 7/64 (10%)
Query: 17 PEIQQASKKQKNDNPSEDDSDGDRPTSPTSRCPICLLVLNNRSYTD--TCLHEFCFLCIK 74
P+ +Q +K SDG+ + +CPICLL + + TC H FC C+
Sbjct: 119 PKNKQKDSPKKASCHEHSSSDGE-----SDKCPICLLSFRGQEVANPATCDHCFCLDCLI 173
Query: 75 QWSQ 78
+WS+
Sbjct: 174 EWSK 177
>gi|426252674|ref|XP_004020029.1| PREDICTED: LOW QUALITY PROTEIN: PHD and RING finger
domain-containing protein 1 [Ovis aries]
Length = 1656
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 11/55 (20%)
Query: 32 SEDDSDGDRPTSPTSRCPICLLVLNNRSY--TDTCLHEFCFLCIKQWSQISSESS 84
S+DDS+ CPICL ++ + C H FC CI +WS+I ES+
Sbjct: 96 SDDDSES---------CPICLNAFREQAVGTPENCAHYFCLDCIVEWSKIPVESA 141
>gi|326437022|gb|EGD82592.1| hypothetical protein PTSG_11982 [Salpingoeca sp. ATCC 50818]
Length = 267
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 6/66 (9%)
Query: 26 QKNDNPSEDDSDGDRPTSPTS------RCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQI 79
++ P + SDG + P RCPICL ++ N +CLH FC CI++ ++
Sbjct: 15 EQQRQPQKVISDGRSVSVPIHIFNEEVRCPICLGLIENTYTAMSCLHRFCAECIQKCLRL 74
Query: 80 SSESSP 85
+ P
Sbjct: 75 GKKECP 80
>gi|392589907|gb|EIW79237.1| hypothetical protein CONPUDRAFT_167020 [Coniophora puteana
RWD-64-598 SS2]
Length = 725
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 26/62 (41%), Gaps = 8/62 (12%)
Query: 22 ASKKQKNDNPSEDDSDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISS 81
A + N P++ +D C ICL V C H FCF CIKQW S
Sbjct: 68 ALRSAGNGEPADSAAD--------DSCNICLEVPTTYGLLTDCGHVFCFQCIKQWRDPES 119
Query: 82 ES 83
+S
Sbjct: 120 KS 121
>gi|157820429|ref|NP_001099846.1| E3 ubiquitin-protein ligase TRIM31 [Rattus norvegicus]
gi|149029346|gb|EDL84606.1| tripartite motif protein 31 (predicted) [Rattus norvegicus]
Length = 507
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 33/71 (46%), Gaps = 6/71 (8%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRLL-----LFASAT 102
CPICL +L + D C H FC CI Q + S LCK S + L AS
Sbjct: 16 CPICLEILQDPVTID-CGHNFCLKCINQIGKTSENILCPLCKCSVSKNTFRPNKLLASLA 74
Query: 103 ECLQYINVYDI 113
E +Q ++ DI
Sbjct: 75 EKIQTMDPADI 85
>gi|413939109|gb|AFW73660.1| hypothetical protein ZEAMMB73_704258 [Zea mays]
Length = 163
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 20 QQASKKQKNDNPSEDDSDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCI 73
++A + + +P +G+ P CPIC+ V+ + ++ C H FC++CI
Sbjct: 40 EEAGMRAASASPQGPAEEGEGPADRDLLCPICMAVIKD-AFLTACGHSFCYMCI 92
>gi|268573548|ref|XP_002641751.1| Hypothetical protein CBG10090 [Caenorhabditis briggsae]
Length = 458
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 46 SRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMS 91
S C IC+ L N CLH FC CI QW+ ++ P +C+++
Sbjct: 22 SGCSICMATLYNAVSCSPCLHTFCAGCIVQWTDQNASKCP-MCRIA 66
>gi|326666398|ref|XP_694845.4| PREDICTED: protein SCAF11 [Danio rerio]
Length = 1319
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Query: 45 TSRCPICL--LVLNNRSYTDTCLHEFCFLCIKQWSQI 79
+ RCPICL ++R+ D C H +C CI +W+Q+
Sbjct: 21 SQRCPICLNRPRRSDRAVPDCCRHVYCSACILRWAQM 57
>gi|255953483|ref|XP_002567494.1| peroxisomal integral membrane protein Pex10-Penicillium chrysogenum
[Penicillium chrysogenum Wisconsin 54-1255]
gi|111609725|gb|ABH11418.1| peroxin 10 [Penicillium chrysogenum]
gi|211589205|emb|CAP95345.1| peroxisomal integral membrane protein Pex10-Penicillium chrysogenum
[Penicillium chrysogenum Wisconsin 54-1255]
Length = 376
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 6/57 (10%)
Query: 41 PTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRLLL 97
P +C +CL + + S T TC H FC++C++ W + E C + +Q LLL
Sbjct: 318 PEGQQRKCTLCLEMFKDPSVT-TCGHVFCWICVRDWVREKPE-----CPLCRQELLL 368
>gi|323449193|gb|EGB05083.1| hypothetical protein AURANDRAFT_66735 [Aureococcus anophagefferens]
Length = 2360
Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 34/84 (40%), Gaps = 9/84 (10%)
Query: 19 IQQASKKQKNDNPS----EDDSDGDRPTSPTSR--CPICLLVLNNRS-YTDTCLHEFCFL 71
+++ + N+NP DD G R P S C ICL L + Y C H FC
Sbjct: 2057 LERMIRANANNNPEIGLRVDDLPGGRAADPRSDALCAICLDELAGKVVYETACAHAFCKG 2116
Query: 72 CIKQWSQISSESSPALCKMSKQRL 95
CI+ W I+ C K L
Sbjct: 2117 CIQSW--IAHAPGAPTCPTCKAHL 2138
>gi|347837227|emb|CCD51799.1| hypothetical protein [Botryotinia fuckeliana]
Length = 485
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 36/80 (45%), Gaps = 8/80 (10%)
Query: 5 LFRQTQKRRLELPEI-QQASKKQKNDNPSEDDSDGDRPTSPTS----RCPIC---LLVLN 56
+FR Q + L + + + S Q + P+ D S P +PT+ CPIC L+
Sbjct: 275 IFRVQQPQALSISQTTPEVSSPQVPEAPTPDISSPQVPEAPTAASTDECPICISPLIAPL 334
Query: 57 NRSYTDTCLHEFCFLCIKQW 76
N C H FC CI+ W
Sbjct: 335 NAILVHPCRHAFCLKCIQTW 354
>gi|413926777|gb|AFW66709.1| hypothetical protein ZEAMMB73_785632 [Zea mays]
Length = 700
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRL 95
C IC ++ +R D C H FC+ CI W+ I++ LCK Q +
Sbjct: 352 CGICRDIVIDRGVLDCCSHWFCYTCIDNWAAITNRC--PLCKSEFQHI 397
>gi|391343079|ref|XP_003745841.1| PREDICTED: PHD and RING finger domain-containing protein 1-like
[Metaseiulus occidentalis]
Length = 272
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 16/85 (18%)
Query: 12 RRLELPEIQQASKKQKNDNPSEDDSDGDRPTSPTSRCPICLLVLNNRSYT-------DTC 64
R + +P + A + + +E DSD CPICL ++YT D+C
Sbjct: 58 REIRIPRMMDAESRAVFTSETEYDSDS---AGKDIICPICL----GKTYTSQLQGRPDSC 110
Query: 65 LHEFCFLCIKQWSQISSESSPALCK 89
H FC CIK WS+ S+++ LC+
Sbjct: 111 SHTFCLECIKTWSR--SKATCVLCR 133
>gi|268531770|ref|XP_002631012.1| Hypothetical protein CBG02764 [Caenorhabditis briggsae]
Length = 250
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Query: 44 PTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQ-WSQISSESSPALCKMSK 92
PT CPICL N TD C H FC CI Q W Q +P C M +
Sbjct: 94 PTHECPICLAEANFAVLTD-CGHIFCCFCIIQYWQQSKPILAPCDCAMCR 142
>gi|344309227|ref|XP_003423278.1| PREDICTED: LOW QUALITY PROTEIN: PHD and RING finger
domain-containing protein 1-like [Loxodonta africana]
Length = 1649
Score = 37.7 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 22/79 (27%)
Query: 9 TQKRRLELPEIQQASKKQKNDNPSEDDSDGDRPTSPTSRCPICLLVLNNRSY--TDTCLH 66
TQKR+LE D DS+ + CPICL V +++ +TC H
Sbjct: 90 TQKRKLEA------------DGTLSSDSEAES-------CPICLNVFRDQAVGTPETCAH 130
Query: 67 EFCFLCIKQWSQISSESSP 85
FC CI +WS+ ++ S P
Sbjct: 131 YFCLDCIVEWSK-NANSCP 148
>gi|291236791|ref|XP_002738322.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 305
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 17 PEIQQASKKQKNDNPSEDDSDGDRP-TSPTSRCPICLLVLNNRSYTDT-CLHEFCFLCIK 74
P + SK + PS D+S+ + PT RC +CL + +S T T C H FC+ CI
Sbjct: 220 PGVLFRSKVSDLNIPSSDNSETEEVYLDPTKRCSLCLE--SRKSSTATPCGHMFCWTCIT 277
Query: 75 QW 76
+W
Sbjct: 278 EW 279
>gi|72013641|ref|XP_785546.1| PREDICTED: RING finger protein 150-like [Strongylocentrotus
purpuratus]
Length = 445
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 49/108 (45%), Gaps = 7/108 (6%)
Query: 6 FRQTQKRRLELPEIQQASKKQKNDNPSEDDSDGDRPTSPTSRCPICL--LVLNNRSYTDT 63
FR Q R ++ +A+KK P DGD+ CPICL +++
Sbjct: 219 FRYAQARGRTQKQLGRAAKKVIAKLPLRTVKDGDQEMVEIEACPICLEFYRISDILRVLP 278
Query: 64 CLHEFCFLCIKQWSQISSESSPALCKMSKQRLLLF---ASATECLQYI 108
C H + C+ QW + + + P +CK++ + L + A+ TE YI
Sbjct: 279 CKHSYHKTCVDQW-LVENRTCP-MCKLNILKALGYQMPAAPTEEAHYI 324
>gi|413926778|gb|AFW66710.1| hypothetical protein ZEAMMB73_785632, partial [Zea mays]
Length = 1322
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRL 95
C IC ++ +R D C H FC+ CI W+ I++ LCK Q +
Sbjct: 352 CGICRDIVIDRGVLDCCSHWFCYTCIDNWAAITNRC--PLCKSEFQHI 397
>gi|253743124|gb|EES99633.1| Zinc finger domain-containing protein [Giardia intestinalis ATCC
50581]
Length = 210
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 39 DRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCK 89
+ P CPIC+ N T C H +C+ C+K W S ESS A+C+
Sbjct: 7 EEPNDSEFSCPICMSEANYPVLT-RCGHIYCYACLKLWLTSSRESSCAVCR 56
>gi|18411509|ref|NP_567206.1| zinc finger-related and helicase and IBR domain-containing protein
[Arabidopsis thaliana]
gi|290463373|sp|P0CE10.1|Y4102_ARATH RecName: Full=Putative uncharacterized protein At4g01020,
chloroplastic; Flags: Precursor
gi|332656567|gb|AEE81967.1| zinc finger-related and helicase and IBR domain-containing protein
[Arabidopsis thaliana]
Length = 1787
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Query: 18 EIQQASKKQKNDNPSEDDSDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWS 77
E++Q +K N+ E + G++P CPICL +++ + C H FC C+ +
Sbjct: 1531 EMRQEVQKMVNELAREKSALGEKPDEIELECPICLSEVDDGYSLEGCSHLFCKACLLEQF 1590
Query: 78 QISS---ESSPALC 88
+ S ++ P LC
Sbjct: 1591 EASMRNFDAFPILC 1604
>gi|401423605|ref|XP_003876289.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322492530|emb|CBZ27806.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 296
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 12/80 (15%)
Query: 18 EIQQASKKQKNDNPSEDDSDGDRPTSPTSRCPICLLVLNNRSY--TDTCLHEFCFLCIKQ 75
E +++++ N + ED D +R C+L L+NR + C H FC+ CI +
Sbjct: 196 EARRSTEAAVNTSSDEDTED--------ARSGKCMLCLSNRRFPTATNCGHIFCWRCIAE 247
Query: 76 WSQISSESSPALCKMSKQRL 95
W I S A+C +Q +
Sbjct: 248 W--IQSNPQEAVCPFCRQHI 265
>gi|256085909|ref|XP_002579152.1| hypothetical protein [Schistosoma mansoni]
gi|360044160|emb|CCD81707.1| hypothetical protein Smp_080520 [Schistosoma mansoni]
Length = 1541
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRLL 96
C ICL +NR C+H FC+ CI +W +S S LCK Q+++
Sbjct: 247 CVICLCEKSNRCVVLPCMHTFCYDCIYRW--LSINPSCPLCKRLAQKII 293
>gi|444514983|gb|ELV10700.1| Protein SCAF11 [Tupaia chinensis]
Length = 636
Score = 37.4 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 6/56 (10%)
Query: 29 DNPSEDDSDGDRPT----SPTSRCPICL--LVLNNRSYTDTCLHEFCFLCIKQWSQ 78
D E++ D T S RCPICL L+ + D+C H FC CI +W++
Sbjct: 18 DMEGEENRDNTAATGLLYSEDDRCPICLNCLLEKEVGFPDSCNHVFCVTCILKWAE 73
>gi|169765512|ref|XP_001817227.1| peroxisome biosynthesis protein (Peroxin-10) [Aspergillus oryzae
RIB40]
gi|238482065|ref|XP_002372271.1| peroxisome biosynthesis protein (Peroxin-10), putative [Aspergillus
flavus NRRL3357]
gi|83765082|dbj|BAE55225.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220700321|gb|EED56659.1| peroxisome biosynthesis protein (Peroxin-10), putative [Aspergillus
flavus NRRL3357]
gi|391870492|gb|EIT79675.1| putative E3 ubiquitin ligase, integral peroxisomal membrane protein
[Aspergillus oryzae 3.042]
Length = 373
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 6/57 (10%)
Query: 41 PTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRLLL 97
P+ SRC +CL + S T TC H FC+ C++ W + E C + +Q +LL
Sbjct: 315 PSGQQSRCTLCLEPFKDPSVT-TCGHVFCWTCVRDWVREKPE-----CPLCRQDVLL 365
>gi|165970572|gb|AAI58468.1| Unknown (protein for MGC:186357) [Xenopus (Silurana) tropicalis]
Length = 608
Score = 37.4 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 30/90 (33%), Positives = 42/90 (46%), Gaps = 9/90 (10%)
Query: 7 RQTQKRRLELPEIQ----QASKKQKNDNPSEDDSDGDRPTSPTSRCPICLLVLNNRSYTD 62
+ QKR+LE PE + + +K + N S + GD T CP+C+ + +
Sbjct: 101 KTPQKRKLEEPEPEPKKAKVEEKDASKNASTLGAAGDFAEELT--CPLCVELFKDPVMV- 157
Query: 63 TCLHEFCFLCI-KQWSQISSESSPALCKMS 91
C H FC CI K W SS + P CK S
Sbjct: 158 ACGHNFCRSCIDKAWEGQSSFACPE-CKES 186
>gi|432106182|gb|ELK32075.1| PHD and RING finger domain-containing protein 1 [Myotis davidii]
Length = 299
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 15/65 (23%)
Query: 48 CPICLLVLNNRSYT--DTCLHEFCFLCIKQWSQI--------SSESSPALCKM-----SK 92
CPICL +++ ++C H FC CI +WS++ E P C++ +
Sbjct: 116 CPICLNAFRDQAVGTPESCAHYFCLDCILEWSKVPVENTRAGEEEDDPTFCEVCGRSDRE 175
Query: 93 QRLLL 97
RLLL
Sbjct: 176 DRLLL 180
>gi|357468743|ref|XP_003604656.1| RING finger protein [Medicago truncatula]
gi|355505711|gb|AES86853.1| RING finger protein [Medicago truncatula]
Length = 249
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 12/95 (12%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRLLLFASATECLQY 107
CPIC+ +NN+ C H C C W S+S P C+ S +R+ ++++ Y
Sbjct: 151 CPICM-EMNNKVVLPNCYHSLCMRCYNDW-HTRSQSCP-FCRDSLKRV----NSSDLWIY 203
Query: 108 INVYDIMILQ-VNTSTFKGLFGVNIGRIDRLHLFT 141
++ +I L+ +N K LF RID+L L +
Sbjct: 204 MSNSEIQDLESINKENLKRLF----MRIDKLPLIS 234
>gi|405966212|gb|EKC31519.1| Tripartite motif-containing protein 3 [Crassostrea gigas]
Length = 670
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 29/53 (54%), Gaps = 6/53 (11%)
Query: 39 DRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMS 91
+R + T RCPICL + N Y +CLH FC CI+ + SS A C+ S
Sbjct: 14 NRASGDTFRCPICLEEVRNPKYL-SCLHTFCESCIQTYI-----SSTATCRGS 60
>gi|168063938|ref|XP_001783924.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664554|gb|EDQ51269.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 443
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 5/48 (10%)
Query: 37 DGDRPTSPTSR---CPICLLVL--NNRSYTDTCLHEFCFLCIKQWSQI 79
+GD+ S +S+ CPICL + + + C+H FC CI++WS++
Sbjct: 114 NGDQGASTSSQEVMCPICLANIEESTEAVLQWCMHRFCTHCIEEWSRV 161
>gi|358055713|dbj|GAA98058.1| hypothetical protein E5Q_04739 [Mixia osmundae IAM 14324]
Length = 1275
Score = 37.4 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 9/62 (14%)
Query: 44 PTSRCPICLLVLNNRSYTDT---CLHEFCFLCIKQWSQISSESSPA------LCKMSKQR 94
P CPIC L N S T C H +C CI++W ++ + A CK+SK
Sbjct: 778 PDLDCPICSDALRNDSREPTITACAHIYCAACIEEWLDAAATTGRARDCPTCRCKLSKNS 837
Query: 95 LL 96
LL
Sbjct: 838 LL 839
>gi|395742225|ref|XP_003777717.1| PREDICTED: LOW QUALITY PROTEIN: PHD and RING finger
domain-containing protein 1 [Pongo abelii]
Length = 1627
Score = 37.4 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 48 CPICLLVLNNRSY--TDTCLHEFCFLCIKQWSQISSESSP 85
CPICL +++ + C H FC CI +WS++SS P
Sbjct: 108 CPICLNAFRDQAVGTPENCAHYFCLDCIVEWSKVSSPLIP 147
>gi|242050166|ref|XP_002462827.1| hypothetical protein SORBIDRAFT_02g032650 [Sorghum bicolor]
gi|241926204|gb|EER99348.1| hypothetical protein SORBIDRAFT_02g032650 [Sorghum bicolor]
Length = 494
Score = 37.4 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 9/56 (16%)
Query: 32 SEDDSDGDRPT---SPTSRCPICLLVL------NNRSYTDTCLHEFCFLCIKQWSQ 78
+++ SDG+ + T CP C + + N+ + CLH+FC++C+ WS+
Sbjct: 238 TKNSSDGENDNWVVANTKHCPSCRVAIEKNQGCNHMTCAAPCLHQFCWICLGAWSE 293
>gi|302841161|ref|XP_002952126.1| hypothetical protein VOLCADRAFT_92717 [Volvox carteri f.
nagariensis]
gi|300262712|gb|EFJ46917.1| hypothetical protein VOLCADRAFT_92717 [Volvox carteri f.
nagariensis]
Length = 434
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 25/50 (50%)
Query: 47 RCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRLL 96
+C ICL + T TC H FCF CI W Q S K+++ +++
Sbjct: 269 KCTICLERMEADLATTTCGHMFCFKCISSWVQKSGNCPQCRSKLTRTKII 318
>gi|54400490|ref|NP_001005994.1| peroxisome biogenesis factor 10 [Danio rerio]
gi|53734027|gb|AAH83412.1| Peroxisome biogenesis factor 10 [Danio rerio]
Length = 318
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 41/95 (43%), Gaps = 11/95 (11%)
Query: 6 FRQTQKRRLELPEIQQASKKQKNDNPSEDDSDGDRPTSPTSRCPICLLVLNNRSYTDTCL 65
RQ Q+ R E K+ +N PS S +S TSRC +CL N + T C
Sbjct: 233 LRQRQRARHEW-------KQHRNLLPSHQVSQS---SSRTSRCILCLEERRNTTSTP-CG 281
Query: 66 HEFCFLCIKQWSQISSESSPALCKMSKQRLLLFAS 100
H FC+ CI +W +E K RL+ S
Sbjct: 282 HLFCWECITEWCNTKNECPLCREKFQPHRLVYLRS 316
>gi|5262156|emb|CAB45785.1| putative protein [Arabidopsis thaliana]
gi|7267599|emb|CAB80911.1| putative protein [Arabidopsis thaliana]
Length = 2322
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Query: 18 EIQQASKKQKNDNPSEDDSDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWS 77
E++Q +K N+ E + G++P CPICL +++ + C H FC C+ +
Sbjct: 1531 EMRQEVQKMVNELAREKSALGEKPDEIELECPICLSEVDDGYSLEGCSHLFCKACLLEQF 1590
Query: 78 QISS---ESSPALC 88
+ S ++ P LC
Sbjct: 1591 EASMRNFDAFPILC 1604
>gi|268531568|ref|XP_002630910.1| Hypothetical protein CBG02634 [Caenorhabditis briggsae]
Length = 637
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Query: 25 KQKNDNPSEDDSDGDRP---TSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQW 76
K+++DN S+ + P T P+ C +C + + + C+HEFC+ CI W
Sbjct: 23 KREDDNFSDSPQSKEEPEDGTEPSEECSVCRNEMIDTTVLSDCVHEFCYDCIIGW 77
>gi|361127317|gb|EHK99290.1| putative E3 ubiquitin-protein ligase [Glarea lozoyensis 74030]
Length = 173
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 32/79 (40%), Gaps = 6/79 (7%)
Query: 23 SKKQKNDNPSEDDSDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSE 82
S + + PS D D + CPIC + TD C H +C C++QW +++
Sbjct: 2 SAETTTNAPSSSTPDTD------NECPICQETFKDPITTDPCKHTYCKRCLRQWLEVTVN 55
Query: 83 SSPALCKMSKQRLLLFASA 101
C + + + F
Sbjct: 56 GRIRTCPLCRGSVEGFKEG 74
>gi|391348267|ref|XP_003748369.1| PREDICTED: E3 ubiquitin-protein ligase NRDP1-like [Metaseiulus
occidentalis]
Length = 312
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 18/29 (62%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCIKQW 76
CPIC VL + +T C H FC CIK+W
Sbjct: 21 CPICSGVLQDPVHTPQCEHAFCRECIKKW 49
>gi|34996481|ref|NP_571288.1| E3 ubiquitin-protein ligase RING2 [Danio rerio]
gi|62901019|sp|Q803I4.1|RING2_DANRE RecName: Full=E3 ubiquitin-protein ligase RING2; AltName:
Full=RING finger protein 1B; Short=RING1b; AltName:
Full=RING finger protein 2
gi|27881923|gb|AAH44472.1| Ring finger protein 2 [Danio rerio]
gi|182890358|gb|AAI64137.1| Rnf2 protein [Danio rerio]
Length = 336
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 25/49 (51%), Gaps = 6/49 (12%)
Query: 31 PSEDDSDG-DRPTSPTS-----RCPICLLVLNNRSYTDTCLHEFCFLCI 73
P E +DG + SP S CPICL +L N T CLH FC CI
Sbjct: 28 PQEAITDGLEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCI 76
>gi|330795580|ref|XP_003285850.1| hypothetical protein DICPUDRAFT_149753 [Dictyostelium purpureum]
gi|325084155|gb|EGC37589.1| hypothetical protein DICPUDRAFT_149753 [Dictyostelium purpureum]
Length = 389
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 8/73 (10%)
Query: 45 TSRCPICLLVLN--NRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRLLLFASAT 102
+ C IC + LN N S + C H FC CI++W ++++ + P LC R F
Sbjct: 247 NNECCICYIKLNTTNTSTIEVCSHTFCNECIRKWCKLNNNTCP-LC-----RKFFFFIQR 300
Query: 103 ECLQYINVYDIMI 115
E ++++D+ +
Sbjct: 301 EGQVKVSIFDVKL 313
>gi|242006500|ref|XP_002424088.1| arginine/serine-rich protein, putative [Pediculus humanus corporis]
gi|212507394|gb|EEB11350.1| arginine/serine-rich protein, putative [Pediculus humanus corporis]
Length = 2376
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 7/56 (12%)
Query: 45 TSRCPICLLVLNNRSY--TDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRLLLF 98
+ +C ICL +NN+ + C H FC +CI +WS+ S+ +C + +Q+ +
Sbjct: 68 SEKCAICLRSINNQEVGNPEGCDHLFCSVCIIEWSKNSN-----VCPLDRQQFSII 118
>gi|403366289|gb|EJY82944.1| hypothetical protein OXYTRI_19439 [Oxytricha trifallax]
Length = 764
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 19/31 (61%)
Query: 45 TSRCPICLLVLNNRSYTDTCLHEFCFLCIKQ 75
T +CP+C +NN T +C H FCF CI Q
Sbjct: 681 TMQCPMCQDTMNNSCLTISCSHSFCFDCIDQ 711
>gi|358056200|dbj|GAA97940.1| hypothetical protein E5Q_04620 [Mixia osmundae IAM 14324]
Length = 439
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 21 QASKKQKNDNPSEDDSDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQIS 80
QA K ++ +E+D+D + S RC +CL + + T+ C H FC+ CI W++
Sbjct: 362 QAEKAEEAQ--TEEDADAEPEDSHARRCTLCLGPRRDPASTE-CGHTFCWECIVGWAREK 418
Query: 81 SESSPALCKMS 91
E LC+ S
Sbjct: 419 PECP--LCRQS 427
>gi|348536586|ref|XP_003455777.1| PREDICTED: protein SCAF11-like [Oreochromis niloticus]
Length = 1066
Score = 37.4 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 6/47 (12%)
Query: 34 DDSDGDRPTSPTSRCPICLLVL--NNRSYTDTCLHEFCFLCIKQWSQ 78
D +DG+ RCPICL VL + D+C H FC C+ W++
Sbjct: 13 DGADGEE----AERCPICLGVLAGGELAMPDSCCHVFCLRCLLTWAE 55
>gi|449529742|ref|XP_004171857.1| PREDICTED: uncharacterized protein LOC101229274 [Cucumis sativus]
Length = 398
Score = 37.0 bits (84), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Query: 43 SPTSRCPICLLVLNN--RSYTDTCLHEFCFLCIKQWSQISS 81
+P+S C IC R D+C H FCF+CI +W++I S
Sbjct: 51 NPSSICVICFSEDGKAERGKLDSCDHYFCFVCIMEWARIES 91
>gi|261326928|emb|CBH09901.1| peroxisome assembly protein, putative [Trypanosoma brucei gambiense
DAL972]
Length = 298
Score = 37.0 bits (84), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 6/66 (9%)
Query: 32 SEDDSD-GDRPTSPTSRCPICLLVLNNRSYTDT-CLHEFCFLCIKQWSQISSESSPALCK 89
EDDSD D S +C +CL N + T T C H FC+ C+ +W I S + A+C
Sbjct: 211 GEDDSDTADEHASVPGKCMLCLG--NRKQPTATLCGHIFCWRCLSEW--IKSNTQGAICP 266
Query: 90 MSKQRL 95
++++
Sbjct: 267 FCRRQI 272
>gi|194223283|ref|XP_001917681.1| PREDICTED: tripartite motif-containing protein 15-like [Equus
caballus]
Length = 300
Score = 37.0 bits (84), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 6/64 (9%)
Query: 41 PTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSP-----ALCKMSKQRL 95
P + CP C L + S T TC H FC+LC+ SQ+ ++ S LCK +Q
Sbjct: 5 PAHEGASCPACKGSLEH-SVTATCGHTFCWLCLALLSQMGAQPSSRVLLCPLCKEKEQTE 63
Query: 96 LLFA 99
L A
Sbjct: 64 TLMA 67
>gi|241159529|ref|XP_002408581.1| hypothetical protein IscW_ISCW002529 [Ixodes scapularis]
gi|215494364|gb|EEC04005.1| hypothetical protein IscW_ISCW002529 [Ixodes scapularis]
Length = 1656
Score = 37.0 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Query: 30 NPSEDDSDGDRPTSPTS-RCPICL--LVLNNRSYTDTCLHEFCFLCIKQWSQ 78
+ +ED S+G + S RCPICL + ++C H FC CI++W++
Sbjct: 48 DAAEDASNGSSASDGQSERCPICLNRFLGQEEGTPESCDHVFCLDCIQEWAR 99
>gi|356573651|ref|XP_003554971.1| PREDICTED: uncharacterized protein LOC100815034 [Glycine max]
Length = 491
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Query: 22 ASKKQKNDNPSEDDSDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISS 81
+S +K + + D+ PTS C ICL ++ C H FCF CI+ W+ ++
Sbjct: 313 SSDDEKFTDGDQADNVAGLPTSTEMSCVICLTEFSSTRGILPCGHRFCFPCIQNWADHTT 372
Query: 82 E----SSPALCKMS 91
S+ LCK S
Sbjct: 373 SMRKTSTCPLCKAS 386
>gi|331238456|ref|XP_003331883.1| hypothetical protein PGTG_13692 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309310873|gb|EFP87464.1| hypothetical protein PGTG_13692 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 286
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 25/63 (39%), Gaps = 3/63 (4%)
Query: 44 PTSRCPICLLVLNNRS---YTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRLLLFAS 100
P CPICL L+ RS T C H F CI W E P C + + L L
Sbjct: 153 PNLDCPICLAELDPRSGPIITSDCGHSFDKYCINCWLYTERERPPYTCPVCRAELKLGGK 212
Query: 101 ATE 103
E
Sbjct: 213 PAE 215
>gi|449439671|ref|XP_004137609.1| PREDICTED: uncharacterized protein LOC101204928 [Cucumis sativus]
Length = 375
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Query: 43 SPTSRCPICLLVLN--NRSYTDTCLHEFCFLCIKQWSQISS 81
+P+S C IC R D+C H FCF+CI +W++I S
Sbjct: 51 NPSSICVICFSEDGKAERGKLDSCDHYFCFVCIMEWARIES 91
>gi|348578003|ref|XP_003474773.1| PREDICTED: E3 ubiquitin-protein ligase RING2-like [Cavia
porcellus]
Length = 291
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 25/49 (51%), Gaps = 6/49 (12%)
Query: 31 PSEDDSDG-DRPTSPTS-----RCPICLLVLNNRSYTDTCLHEFCFLCI 73
P E +DG + SP S CPICL +L N T CLH FC CI
Sbjct: 28 PQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCI 76
>gi|46403229|gb|AAS92634.1| ring finger protein 2 [Danio rerio]
Length = 338
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 25/49 (51%), Gaps = 6/49 (12%)
Query: 31 PSEDDSDG-DRPTSPTS-----RCPICLLVLNNRSYTDTCLHEFCFLCI 73
P E +DG + SP S CPICL +L N T CLH FC CI
Sbjct: 30 PQEAITDGLEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCI 78
>gi|242058973|ref|XP_002458632.1| hypothetical protein SORBIDRAFT_03g037070 [Sorghum bicolor]
gi|241930607|gb|EES03752.1| hypothetical protein SORBIDRAFT_03g037070 [Sorghum bicolor]
Length = 472
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 39/101 (38%), Gaps = 24/101 (23%)
Query: 7 RQTQKRRLELPEIQQASKKQKNDNPSEDDSDGDRPTS---------------------PT 45
R KRRL PE Q ++D+ +EDD D +
Sbjct: 46 RGATKRRLTDPEPQHG---LEDDSDAEDDGGADSDSEFSQSDGGGTDEFMLVKLAEIRKE 102
Query: 46 SRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPA 86
+CPICL ++ CLH FC CI + ++ + PA
Sbjct: 103 VQCPICLGIIRKTRTVMECLHRFCRDCIDKSMRLGNNECPA 143
>gi|348521924|ref|XP_003448476.1| PREDICTED: hypothetical protein LOC100711390 [Oreochromis
niloticus]
Length = 949
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 44/99 (44%), Gaps = 9/99 (9%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCIKQ-WSQISSESSPALCKMSKQRLLLFASATEC-L 105
CP+C + + + TC H FC C+K W+Q + P KMS+Q S C L
Sbjct: 501 CPVCHDIFRDPVFL-TCSHSFCKTCLKNCWAQKLGQQCPVCKKMSEQ------SDPPCNL 553
Query: 106 QYINVYDIMILQVNTSTFKGLFGVNIGRIDRLHLFTFGH 144
N+ + + + N ST G + ++L LF H
Sbjct: 554 VLKNLAEAYLKKKNQSTAAGSEVICSLHFEKLKLFCLDH 592
>gi|330791933|ref|XP_003284045.1| hypothetical protein DICPUDRAFT_26932 [Dictyostelium purpureum]
gi|325085974|gb|EGC39371.1| hypothetical protein DICPUDRAFT_26932 [Dictyostelium purpureum]
Length = 225
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 30/58 (51%), Gaps = 10/58 (17%)
Query: 32 SEDDSDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCK 89
S+D+ D D+ CPICL N + C H FC CIK+W + S S P LC+
Sbjct: 140 SQDNGDDDK------LCPICLD--NEATSIGDCAHAFCTFCIKEWRE-KSNSCP-LCR 187
>gi|47215614|emb|CAG11645.1| unnamed protein product [Tetraodon nigroviridis]
Length = 306
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 25/49 (51%), Gaps = 6/49 (12%)
Query: 31 PSEDDSDG-DRPTSPTS-----RCPICLLVLNNRSYTDTCLHEFCFLCI 73
P E +DG + SP S CPICL +L N T CLH FC CI
Sbjct: 30 PQEAITDGLEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCI 78
>gi|148362153|gb|ABQ59676.1| RING1 [Salmo salar]
Length = 395
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L N T CLH FC CI
Sbjct: 55 CPICLDMLKNTMTTKECLHRFCSDCI 80
>gi|338726057|ref|XP_001915573.2| PREDICTED: LOW QUALITY PROTEIN: protein SCAF11 [Equus caballus]
Length = 1248
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Query: 43 SPTSRCPICL--LVLNNRSYTDTCLHEFCFLCIKQWSQ 78
S RCPICL L+ + ++C H FC CI +W++
Sbjct: 36 SEADRCPICLNCLLEKEVGFPESCNHVFCMTCILKWAE 73
>gi|328702909|ref|XP_001947958.2| PREDICTED: hypothetical protein LOC100163657 [Acyrthosiphon
pisum]
Length = 1750
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Query: 47 RCPICLLVLNNR--SYTDTCLHEFCFLCIKQWSQ 78
+CPICL L + + ++CLH FC C+ +W++
Sbjct: 41 KCPICLTRLGQQDLASPNSCLHTFCLNCLTEWAK 74
>gi|312069659|ref|XP_003137785.1| WWE domain-containing protein [Loa loa]
gi|307767050|gb|EFO26284.1| WWE domain-containing protein [Loa loa]
Length = 234
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 26/55 (47%)
Query: 20 QQASKKQKNDNPSEDDSDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIK 74
++ + ++ + P D D R CPIC ++ C H+FCFLCIK
Sbjct: 4 EKEGRTEEMEGPIVDVDDSLRRPKNCDECPICYQEFAYKTELPDCGHKFCFLCIK 58
>gi|348543967|ref|XP_003459453.1| PREDICTED: E3 ubiquitin-protein ligase RING2-like [Oreochromis
niloticus]
Length = 342
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 25/49 (51%), Gaps = 6/49 (12%)
Query: 31 PSEDDSDG-DRPTSPTS-----RCPICLLVLNNRSYTDTCLHEFCFLCI 73
P E +DG + SP S CPICL +L N T CLH FC CI
Sbjct: 28 PQEAITDGLEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCI 76
>gi|293331775|ref|NP_001169665.1| uncharacterized LOC100383546 [Zea mays]
gi|224030721|gb|ACN34436.1| unknown [Zea mays]
gi|414880136|tpg|DAA57267.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 474
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 43/101 (42%), Gaps = 24/101 (23%)
Query: 7 RQTQKRRLELPEIQQASKKQKNDNPSEDD--SDGDRPTSPTS------------------ 46
R KR L PE QQ + +D+ +EDD +DGD S +
Sbjct: 45 RDAAKRWLTDPEPQQGFE---DDSDAEDDGGADGDSEFSQSDGGGNDGFMLVKLAEIRKE 101
Query: 47 -RCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPA 86
+CPICL ++ CLH FC CI + ++ + P+
Sbjct: 102 VQCPICLGIIRKTRTVMECLHRFCRDCIDKSMRLGNNECPS 142
>gi|417406523|gb|JAA49915.1| Putative protein scaf11 splicing factor arginine/serine-rich 2
[Desmodus rotundus]
Length = 1476
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Query: 43 SPTSRCPICL--LVLNNRSYTDTCLHEFCFLCIKQWSQI 79
S RCPICL L+ + ++C H FC CI +W++
Sbjct: 36 SEADRCPICLNCLLEKEVGFPESCNHVFCMTCILKWAET 74
>gi|417406500|gb|JAA49907.1| Putative protein scaf11 splicing factor arginine/serine-rich 2
[Desmodus rotundus]
Length = 1460
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Query: 43 SPTSRCPICL--LVLNNRSYTDTCLHEFCFLCIKQWSQI 79
S RCPICL L+ + ++C H FC CI +W++
Sbjct: 36 SEADRCPICLNCLLEKEVGFPESCNHVFCMTCILKWAET 74
>gi|313215311|emb|CBY42928.1| unnamed protein product [Oikopleura dioica]
Length = 314
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 16/29 (55%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCIKQW 76
CPIC VL N Y C H FC CI +W
Sbjct: 19 CPICRGVLENVIYAPKCEHAFCSDCIHEW 47
>gi|395825224|ref|XP_003785839.1| PREDICTED: E3 ubiquitin-protein ligase RING2 [Otolemur garnettii]
Length = 246
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L N T CLH FC CI
Sbjct: 51 CPICLDMLKNTMTTKECLHRFCADCI 76
>gi|326432485|gb|EGD78055.1| hypothetical protein PTSG_08934 [Salpingoeca sp. ATCC 50818]
Length = 5737
Score = 37.0 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 17/33 (51%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCIKQWSQIS 80
CPICL+ N S C H FC CI QW+Q S
Sbjct: 4875 CPICLVTAVNVS--TECGHRFCRQCIVQWAQAS 4905
>gi|315045792|ref|XP_003172271.1| peroxisome assembly protein 10 [Arthroderma gypseum CBS 118893]
gi|311342657|gb|EFR01860.1| peroxisome assembly protein 10 [Arthroderma gypseum CBS 118893]
Length = 376
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 6/56 (10%)
Query: 41 PTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRLL 96
P P +C +CL + S + TC H FC+ CI+ W Q E C + +Q L
Sbjct: 318 PAGPQRKCTLCLDPFKDPSVS-TCGHVFCWTCIRDWVQEKPE-----CPLCRQEAL 367
>gi|260182163|gb|ACX35592.1| RING1 [Salmo salar]
Length = 388
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L N T CLH FC CI
Sbjct: 48 CPICLDMLKNTMTTKECLHRFCSDCI 73
>gi|325090509|gb|EGC43819.1| peroxin 12 [Ajellomyces capsulatus H88]
Length = 516
Score = 37.0 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 22/49 (44%), Positives = 28/49 (57%), Gaps = 6/49 (12%)
Query: 30 NPSEDDSDGDRPTSP--TSRCPICLLVLNNRSYTDTCLHEFCFLCIKQW 76
+P+ DSD PTS S CPICL LNN + T + FC+ CI +W
Sbjct: 384 DPTAIDSD---PTSAPNQSPCPICLRPLNNPAVCQTG-YVFCYSCIFRW 428
>gi|417399162|gb|JAA46609.1| Putative e3 ubiquitin ligase [Desmodus rotundus]
Length = 336
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L N T CLH FC CI
Sbjct: 51 CPICLDMLKNTMTTKECLHRFCADCI 76
>gi|302791581|ref|XP_002977557.1| hypothetical protein SELMODRAFT_417401 [Selaginella moellendorffii]
gi|300154927|gb|EFJ21561.1| hypothetical protein SELMODRAFT_417401 [Selaginella moellendorffii]
Length = 439
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 19/30 (63%)
Query: 63 TCLHEFCFLCIKQWSQISSESSPALCKMSK 92
C H+FCF CIK+WSQ S ++ C + K
Sbjct: 308 ACGHQFCFDCIKKWSQHSGSANTPKCPLCK 337
>gi|198427593|ref|XP_002130931.1| PREDICTED: similar to ring finger protein 2 [Ciona intestinalis]
Length = 372
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L N T CLH FC CI
Sbjct: 50 CPICLDMLRNTMTTKECLHRFCSECI 75
>gi|444729309|gb|ELW69733.1| E3 ubiquitin-protein ligase RING2 [Tupaia chinensis]
Length = 336
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L N T CLH FC CI
Sbjct: 51 CPICLDMLKNTMTTKECLHRFCADCI 76
>gi|197097984|ref|NP_001127433.1| E3 ubiquitin-protein ligase RING2 [Pongo abelii]
gi|62900923|sp|Q5R9J5.1|RING2_PONAB RecName: Full=E3 ubiquitin-protein ligase RING2; AltName:
Full=RING finger protein 1B; Short=RING1b; AltName:
Full=RING finger protein 2
gi|55729672|emb|CAH91565.1| hypothetical protein [Pongo abelii]
Length = 336
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L N T CLH FC CI
Sbjct: 51 CPICLDMLKNTMTTKECLHRFCADCI 76
>gi|417406456|gb|JAA49886.1| Putative protein scaf11 splicing factor arginine/serine-rich 2
[Desmodus rotundus]
Length = 1430
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Query: 43 SPTSRCPICL--LVLNNRSYTDTCLHEFCFLCIKQWSQI 79
S RCPICL L+ + ++C H FC CI +W++
Sbjct: 36 SEADRCPICLNCLLEKEVGFPESCNHVFCMTCILKWAET 74
>gi|355558944|gb|EHH15724.1| hypothetical protein EGK_01854 [Macaca mulatta]
Length = 246
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L N T CLH FC CI
Sbjct: 51 CPICLDMLKNTMTTKECLHRFCADCI 76
>gi|195179161|ref|XP_002029089.1| GL18606 [Drosophila persimilis]
gi|195179163|ref|XP_002029090.1| GL18595 [Drosophila persimilis]
gi|195186034|ref|XP_002029285.1| GL23847 [Drosophila persimilis]
gi|198477350|ref|XP_002136654.1| GA27903 [Drosophila pseudoobscura pseudoobscura]
gi|198477352|ref|XP_002136655.1| GA27902 [Drosophila pseudoobscura pseudoobscura]
gi|198477354|ref|XP_002136656.1| GA27901 [Drosophila pseudoobscura pseudoobscura]
gi|194107804|gb|EDW29847.1| GL18606 [Drosophila persimilis]
gi|194107805|gb|EDW29848.1| GL18595 [Drosophila persimilis]
gi|194115771|gb|EDW37814.1| GL23847 [Drosophila persimilis]
gi|198142949|gb|EDY71661.1| GA27903 [Drosophila pseudoobscura pseudoobscura]
gi|198142950|gb|EDY71662.1| GA27902 [Drosophila pseudoobscura pseudoobscura]
gi|198142951|gb|EDY71663.1| GA27901 [Drosophila pseudoobscura pseudoobscura]
Length = 85
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Query: 32 SEDDSDGDRPTSPTSRCPICLLVLNNR-SYTDTCLHEFCFLCIKQWSQISSESSPALCKM 90
+ D D S CPIC LNNR S C H FCF C++ +I+ S+ LC+
Sbjct: 16 TGDSGDEAEECSNAILCPICYEHLNNRCSVATICGHLFCFKCLRNCVKIN--SACPLCRK 73
Query: 91 SKQRLLLF 98
S L F
Sbjct: 74 SLNNSLYF 81
>gi|148707518|gb|EDL39465.1| ring finger protein 2, isoform CRA_a [Mus musculus]
Length = 337
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L N T CLH FC CI
Sbjct: 52 CPICLDMLKNTMTTKECLHRFCADCI 77
>gi|308810194|ref|XP_003082406.1| Predicted E3 ubiquitin ligase (ISS) [Ostreococcus tauri]
gi|116060874|emb|CAL57352.1| Predicted E3 ubiquitin ligase (ISS) [Ostreococcus tauri]
Length = 583
Score = 37.0 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 27/90 (30%), Positives = 40/90 (44%), Gaps = 3/90 (3%)
Query: 2 AESLFRQTQKRRL--ELPEIQQASKKQKNDNPSEDDSDGDRPTSPTSRCPICLLVLNNRS 59
+ LF Q+ R + E ++ +AS+ ED + + CPICL
Sbjct: 6 SRELFLQSNFRFMLVEYADLDRASRDADRMVSWEDVVAVEHGSVGGVTCPICLDEAPTAP 65
Query: 60 YTDTCLHEFCFLCIKQWSQISSES-SPALC 88
T TC H FCF CI + + + ES P+ C
Sbjct: 66 QTTTCGHAFCFGCIARHALTTRESGKPSKC 95
>gi|281353876|gb|EFB29460.1| hypothetical protein PANDA_009706 [Ailuropoda melanoleuca]
Length = 333
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L N T CLH FC CI
Sbjct: 51 CPICLDMLKNTMTTKECLHRFCADCI 76
>gi|240278571|gb|EER42077.1| peroxin 12 [Ajellomyces capsulatus H143]
Length = 516
Score = 37.0 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 22/49 (44%), Positives = 28/49 (57%), Gaps = 6/49 (12%)
Query: 30 NPSEDDSDGDRPTSP--TSRCPICLLVLNNRSYTDTCLHEFCFLCIKQW 76
+P+ DSD PTS S CPICL LNN + T + FC+ CI +W
Sbjct: 384 DPTAIDSD---PTSAPNQSPCPICLRPLNNPAVCQTG-YVFCYSCIFRW 428
>gi|339243901|ref|XP_003377876.1| ATPase, AAA family [Trichinella spiralis]
gi|316973259|gb|EFV56879.1| ATPase, AAA family [Trichinella spiralis]
Length = 1151
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPAL-CKMSKQRLL 96
CPICL +L N T CLH FC CI + ++ P CK+ +R L
Sbjct: 56 CPICLDMLKNTMTTKECLHRFCQDCITTALRSGNKECPTCRCKLVSKRSL 105
>gi|449435976|ref|XP_004135770.1| PREDICTED: uncharacterized protein LOC101205950 [Cucumis sativus]
Length = 830
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 8/71 (11%)
Query: 48 CPICLLVLNNRSYTDT---CLHEFCFLCIKQWSQISSESSPALCKMSKQRLLLFASATEC 104
C ICL + R T C H FCF CI +W+++ S C + KQR +
Sbjct: 325 CGICLSEEDKRRVRGTLNCCSHFFCFSCIMEWAKVESR-----CPLCKQRFQTISKPGRS 379
Query: 105 LQYINVYDIMI 115
I++ + ++
Sbjct: 380 TAGIDLREFVV 390
>gi|6005747|ref|NP_009143.1| E3 ubiquitin-protein ligase RING2 [Homo sapiens]
gi|332230654|ref|XP_003264507.1| PREDICTED: E3 ubiquitin-protein ligase RING2 isoform 1 [Nomascus
leucogenys]
gi|332811387|ref|XP_514057.3| PREDICTED: E3 ubiquitin-protein ligase RING2 isoform 2 [Pan
troglodytes]
gi|397489263|ref|XP_003815650.1| PREDICTED: E3 ubiquitin-protein ligase RING2 isoform 1 [Pan
paniscus]
gi|402857835|ref|XP_003893444.1| PREDICTED: E3 ubiquitin-protein ligase RING2 isoform 1 [Papio
anubis]
gi|426333040|ref|XP_004028095.1| PREDICTED: E3 ubiquitin-protein ligase RING2 isoform 1 [Gorilla
gorilla gorilla]
gi|62901044|sp|Q99496.1|RING2_HUMAN RecName: Full=E3 ubiquitin-protein ligase RING2; AltName:
Full=Huntingtin-interacting protein 2-interacting
protein 3; Short=HIP2-interacting protein 3; AltName:
Full=Protein DinG; AltName: Full=RING finger protein
1B; Short=RING1b; AltName: Full=RING finger protein 2;
AltName: Full=RING finger protein BAP-1
gi|4769008|gb|AAD29717.1|AF141327_1 ring finger protein BAP-1 [Homo sapiens]
gi|1785643|emb|CAA71596.1| dinG [Homo sapiens]
gi|15214887|gb|AAH12583.1| Ring finger protein 2 [Homo sapiens]
gi|119611594|gb|EAW91188.1| ring finger protein 2, isoform CRA_b [Homo sapiens]
gi|123988874|gb|ABM83858.1| ring finger protein 2 [synthetic construct]
gi|123999200|gb|ABM87180.1| ring finger protein 2 [synthetic construct]
gi|189054551|dbj|BAG37324.1| unnamed protein product [Homo sapiens]
gi|208967348|dbj|BAG73688.1| ring finger protein 2 [synthetic construct]
gi|380815346|gb|AFE79547.1| E3 ubiquitin-protein ligase RING2 [Macaca mulatta]
gi|383412967|gb|AFH29697.1| E3 ubiquitin-protein ligase RING2 [Macaca mulatta]
gi|410221702|gb|JAA08070.1| ring finger protein 2 [Pan troglodytes]
gi|410263314|gb|JAA19623.1| ring finger protein 2 [Pan troglodytes]
gi|410305956|gb|JAA31578.1| ring finger protein 2 [Pan troglodytes]
gi|410331985|gb|JAA34939.1| ring finger protein 2 [Pan troglodytes]
Length = 336
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L N T CLH FC CI
Sbjct: 51 CPICLDMLKNTMTTKECLHRFCADCI 76
>gi|332811389|ref|XP_003308686.1| PREDICTED: E3 ubiquitin-protein ligase RING2 isoform 1 [Pan
troglodytes]
gi|397489265|ref|XP_003815651.1| PREDICTED: E3 ubiquitin-protein ligase RING2 isoform 2 [Pan
paniscus]
gi|402857837|ref|XP_003893445.1| PREDICTED: E3 ubiquitin-protein ligase RING2 isoform 2 [Papio
anubis]
gi|426333042|ref|XP_004028096.1| PREDICTED: E3 ubiquitin-protein ligase RING2 isoform 2 [Gorilla
gorilla gorilla]
gi|441624474|ref|XP_004088993.1| PREDICTED: E3 ubiquitin-protein ligase RING2 isoform 2 [Nomascus
leucogenys]
gi|119611593|gb|EAW91187.1| ring finger protein 2, isoform CRA_a [Homo sapiens]
gi|193787177|dbj|BAG52383.1| unnamed protein product [Homo sapiens]
Length = 264
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L N T CLH FC CI
Sbjct: 51 CPICLDMLKNTMTTKECLHRFCADCI 76
>gi|33563274|ref|NP_035407.1| E3 ubiquitin-protein ligase RING2 [Mus musculus]
gi|296229541|ref|XP_002760304.1| PREDICTED: E3 ubiquitin-protein ligase RING2-like [Callithrix
jacchus]
gi|403266315|ref|XP_003925335.1| PREDICTED: E3 ubiquitin-protein ligase RING2 isoform 1 [Saimiri
boliviensis boliviensis]
gi|62901047|sp|Q9CQJ4.1|RING2_MOUSE RecName: Full=E3 ubiquitin-protein ligase RING2; AltName:
Full=RING finger protein 1B; Short=RING1b; AltName:
Full=RING finger protein 2
gi|12849049|dbj|BAB28186.1| unnamed protein product [Mus musculus]
gi|12850291|dbj|BAB28663.1| unnamed protein product [Mus musculus]
gi|18043367|gb|AAH20122.1| Ring finger protein 2 [Mus musculus]
gi|26326309|dbj|BAC26898.1| unnamed protein product [Mus musculus]
gi|71059923|emb|CAJ18505.1| Rnf2 [Mus musculus]
gi|74217079|dbj|BAE26638.1| unnamed protein product [Mus musculus]
gi|148707519|gb|EDL39466.1| ring finger protein 2, isoform CRA_b [Mus musculus]
gi|149058413|gb|EDM09570.1| ring finger protein 2 [Rattus norvegicus]
Length = 336
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L N T CLH FC CI
Sbjct: 51 CPICLDMLKNTMTTKECLHRFCADCI 76
>gi|395530972|ref|XP_003767558.1| PREDICTED: E3 ubiquitin-protein ligase RING2 [Sarcophilus
harrisii]
Length = 336
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L N T CLH FC CI
Sbjct: 51 CPICLDMLKNTMTTKECLHRFCADCI 76
>gi|291412444|ref|XP_002722489.1| PREDICTED: ring finger protein 2 [Oryctolagus cuniculus]
Length = 336
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L N T CLH FC CI
Sbjct: 51 CPICLDMLKNTMTTKECLHRFCADCI 76
>gi|229366298|gb|ACQ58129.1| E3 ubiquitin-protein ligase RING2 [Anoplopoma fimbria]
Length = 344
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L N T CLH FC CI
Sbjct: 53 CPICLDMLKNTMTTKECLHRFCADCI 78
>gi|224056986|ref|XP_002190866.1| PREDICTED: E3 ubiquitin-protein ligase RING2 [Taeniopygia
guttata]
Length = 336
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L N T CLH FC CI
Sbjct: 51 CPICLDMLKNTMTTKECLHRFCADCI 76
>gi|255580467|ref|XP_002531059.1| brca1 associated ring domain, putative [Ricinus communis]
gi|223529354|gb|EEF31320.1| brca1 associated ring domain, putative [Ricinus communis]
Length = 987
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Query: 47 RCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRLLLFASATECLQ 106
+CPICL +LN+ + + TC H FC CI + + S S+ +CK+ QR + A A
Sbjct: 15 KCPICLSLLNS-AVSLTCNHIFCNSCIVK--SMKSGSNCPVCKVPYQRREVRA-APHMDN 70
Query: 107 YINVYDIM 114
+N+Y M
Sbjct: 71 LVNIYKSM 78
>gi|195449467|ref|XP_002072084.1| GK22656 [Drosophila willistoni]
gi|194168169|gb|EDW83070.1| GK22656 [Drosophila willistoni]
Length = 2325
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Query: 47 RCPICLLVLNNRSYTD--TCLHEFCFLCIKQWSQ 78
+CPICLL + TC H FC CI+ WS+
Sbjct: 161 KCPICLLTFRQQEIGTPVTCEHIFCAACIEAWSK 194
>gi|449680999|ref|XP_002164212.2| PREDICTED: TNF receptor-associated factor 3-like [Hydra
magnipapillata]
Length = 464
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
Query: 35 DSDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQR 94
D + P +CP+C L L T+ C H FC CIK +I + LC + +Q
Sbjct: 45 DENFVNPLPSDLKCPVCFLALRQPIQTEECGHRFCESCIKNIKRIEGQ---LLCSLDRQM 101
Query: 95 LLL 97
+ L
Sbjct: 102 IDL 104
>gi|432881043|ref|XP_004073777.1| PREDICTED: E3 ubiquitin-protein ligase RING2-A-like [Oryzias
latipes]
Length = 388
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L N T CLH FC CI
Sbjct: 48 CPICLDMLKNTMTTKECLHRFCSDCI 73
>gi|431915925|gb|ELK16179.1| E3 ubiquitin-protein ligase RING2 [Pteropus alecto]
Length = 336
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L N T CLH FC CI
Sbjct: 51 CPICLDMLKNTMTTKECLHRFCADCI 76
>gi|155372127|ref|NP_001094673.1| E3 ubiquitin-protein ligase RING2 [Bos taurus]
gi|57088937|ref|XP_537164.1| PREDICTED: E3 ubiquitin-protein ligase RING2 isoform 2 [Canis
lupus familiaris]
gi|194210405|ref|XP_001490057.2| PREDICTED: e3 ubiquitin-protein ligase RING2-like [Equus
caballus]
gi|354477357|ref|XP_003500887.1| PREDICTED: E3 ubiquitin-protein ligase RING2 [Cricetulus griseus]
gi|410986000|ref|XP_004001389.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RING2
[Felis catus]
gi|426240030|ref|XP_004013918.1| PREDICTED: E3 ubiquitin-protein ligase RING2 [Ovis aries]
gi|151554874|gb|AAI48045.1| RNF2 protein [Bos taurus]
gi|296478860|tpg|DAA20975.1| TPA: E3 ubiquitin-protein ligase RING2 [Bos taurus]
gi|344238862|gb|EGV94965.1| E3 ubiquitin-protein ligase RING2 [Cricetulus griseus]
gi|351705546|gb|EHB08465.1| E3 ubiquitin-protein ligase RING2 [Heterocephalus glaber]
gi|440908241|gb|ELR58285.1| E3 ubiquitin-protein ligase RING2 [Bos grunniens mutus]
Length = 336
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L N T CLH FC CI
Sbjct: 51 CPICLDMLKNTMTTKECLHRFCADCI 76
>gi|71043690|ref|NP_001020838.1| E3 ubiquitin-protein ligase RING2 [Rattus norvegicus]
gi|90101447|sp|Q4KLY4.1|RING2_RAT RecName: Full=E3 ubiquitin-protein ligase RING2; AltName:
Full=RING finger protein 1B; Short=RING1b; AltName:
Full=RING finger protein 2
gi|68533722|gb|AAH98941.1| Ring finger protein 2 [Rattus norvegicus]
Length = 308
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L N T CLH FC CI
Sbjct: 51 CPICLDMLKNTMTTKECLHRFCADCI 76
>gi|417406432|gb|JAA49876.1| Putative protein scaf11 splicing factor arginine/serine-rich 2
[Desmodus rotundus]
Length = 1415
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Query: 43 SPTSRCPICL--LVLNNRSYTDTCLHEFCFLCIKQWSQI 79
S RCPICL L+ + ++C H FC CI +W++
Sbjct: 36 SEADRCPICLNCLLEKEVGFPESCNHVFCMTCILKWAET 74
>gi|403266317|ref|XP_003925336.1| PREDICTED: E3 ubiquitin-protein ligase RING2 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 264
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L N T CLH FC CI
Sbjct: 51 CPICLDMLKNTMTTKECLHRFCADCI 76
>gi|397510866|ref|XP_003825806.1| PREDICTED: LOW QUALITY PROTEIN: protein SCAF11 [Pan paniscus]
Length = 1537
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Query: 43 SPTSRCPICL--LVLNNRSYTDTCLHEFCFLCIKQWSQ 78
S RCPICL L+ + ++C H FC CI +W++
Sbjct: 100 SEADRCPICLNCLLEKEVGFPESCNHVFCMTCILKWAE 137
>gi|355716862|gb|AES05749.1| ring finger protein 2 [Mustela putorius furo]
Length = 334
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L N T CLH FC CI
Sbjct: 50 CPICLDMLKNTMTTKECLHRFCADCI 75
>gi|126306334|ref|XP_001366901.1| PREDICTED: e3 ubiquitin-protein ligase RING2-like [Monodelphis
domestica]
gi|149636359|ref|XP_001516692.1| PREDICTED: E3 ubiquitin-protein ligase RING2-like
[Ornithorhynchus anatinus]
Length = 336
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L N T CLH FC CI
Sbjct: 51 CPICLDMLKNTMTTKECLHRFCADCI 76
>gi|449277702|gb|EMC85785.1| E3 ubiquitin-protein ligase RING2 [Columba livia]
Length = 336
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L N T CLH FC CI
Sbjct: 51 CPICLDMLKNTMTTKECLHRFCADCI 76
>gi|432114542|gb|ELK36390.1| Protein SCAF11, partial [Myotis davidii]
Length = 1109
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Query: 43 SPTSRCPICL--LVLNNRSYTDTCLHEFCFLCIKQWSQ 78
S RCPICL L+ + ++C H FC CI +W++
Sbjct: 41 SEADRCPICLNCLLEKEVGFPESCNHVFCMTCILKWAE 78
>gi|425766975|gb|EKV05563.1| Peroxin 10 [Penicillium digitatum Pd1]
gi|425780126|gb|EKV18144.1| Peroxin 10 [Penicillium digitatum PHI26]
Length = 375
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 8/67 (11%)
Query: 33 EDDSDGDR--PTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKM 90
EDD P +C +CL + + S T TC H FC++C++ W + E C +
Sbjct: 307 EDDPGAVSWMPEGQQRKCTLCLEMFKDPSVT-TCGHVFCWICVRDWVREKPE-----CPL 360
Query: 91 SKQRLLL 97
+Q +LL
Sbjct: 361 CRQEVLL 367
>gi|26354897|dbj|BAC41075.1| unnamed protein product [Mus musculus]
Length = 336
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L N T CLH FC CI
Sbjct: 51 CPICLDMLKNTMTTKECLHRFCADCI 76
>gi|355746097|gb|EHH50722.1| hypothetical protein EGM_01592 [Macaca fascicularis]
Length = 336
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L N T CLH FC CI
Sbjct: 51 CPICLDMLKNTMTTKECLHRFCADCI 76
>gi|326924674|ref|XP_003208550.1| PREDICTED: e3 ubiquitin-protein ligase RING2-like [Meleagris
gallopavo]
Length = 336
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L N T CLH FC CI
Sbjct: 51 CPICLDMLKNTMTTKECLHRFCADCI 76
>gi|443685943|gb|ELT89389.1| hypothetical protein CAPTEDRAFT_219532 [Capitella teleta]
Length = 337
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L N T CLH FC CI
Sbjct: 45 CPICLDMLKNTMTTKECLHRFCQECI 70
>gi|432911762|ref|XP_004078710.1| PREDICTED: E3 ubiquitin-protein ligase RING2-like [Oryzias
latipes]
Length = 342
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 25/49 (51%), Gaps = 6/49 (12%)
Query: 31 PSEDDSDG-DRPTSPTS-----RCPICLLVLNNRSYTDTCLHEFCFLCI 73
P E +DG + SP S CPICL +L N T CLH FC CI
Sbjct: 28 PQEAITDGLEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCI 76
>gi|390470975|ref|XP_002755743.2| PREDICTED: PHD and RING finger domain-containing protein 1
[Callithrix jacchus]
Length = 1596
Score = 36.6 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 7/68 (10%)
Query: 19 IQQASKKQKNDNPSEDDSDGDRPTSPTSRCPICLLVLNNRSY--TDTCLHEFCFLCIKQW 76
++ A ++K + +SD D CPICL +++ + C H FC CI +W
Sbjct: 79 LEVAGTQKKLEAAGSFNSDDD-----AESCPICLNAFRDQAVGTPENCAHYFCLDCIVEW 133
Query: 77 SQISSESS 84
S+I E++
Sbjct: 134 SKIPVENA 141
>gi|163914471|ref|NP_001106320.1| ring finger protein 2 [Xenopus laevis]
gi|160773127|gb|AAI55052.1| LOC100127274 protein [Xenopus laevis]
gi|213625992|gb|AAI69620.1| Hypothetical protein LOC100127274 [Xenopus laevis]
gi|213626554|gb|AAI69622.1| Hypothetical protein LOC100127274 [Xenopus laevis]
Length = 336
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L N T CLH FC CI
Sbjct: 51 CPICLDMLKNTMTTKECLHRFCADCI 76
>gi|118094209|ref|XP_422295.2| PREDICTED: E3 ubiquitin-protein ligase RING2 [Gallus gallus]
Length = 336
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L N T CLH FC CI
Sbjct: 51 CPICLDMLKNTMTTKECLHRFCADCI 76
>gi|2239142|emb|CAA73380.1| polycomb-M33 interacting protein Ring1B [Mus musculus]
Length = 339
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L N T CLH FC CI
Sbjct: 51 CPICLDMLKNTMTTKECLHRFCADCI 76
>gi|335295881|ref|XP_003357628.1| PREDICTED: E3 ubiquitin-protein ligase RING2-like isoform 2 [Sus
scrofa]
Length = 347
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L N T CLH FC CI
Sbjct: 62 CPICLDMLKNTMTTKECLHRFCADCI 87
>gi|242066674|ref|XP_002454626.1| hypothetical protein SORBIDRAFT_04g034480 [Sorghum bicolor]
gi|241934457|gb|EES07602.1| hypothetical protein SORBIDRAFT_04g034480 [Sorghum bicolor]
Length = 725
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 5/43 (11%)
Query: 31 PSEDDSDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCI 73
P+ED+ DR CPIC+ ++ + ++ C H FC++CI
Sbjct: 57 PAEDEGPADRDL----LCPICMALIKD-AFLTACGHSFCYMCI 94
>gi|47497988|ref|NP_998872.1| ring finger protein 2 [Xenopus (Silurana) tropicalis]
gi|171847227|gb|AAI61443.1| ring finger protein 2 [Xenopus (Silurana) tropicalis]
gi|213624130|gb|AAI70688.1| ring finger protein 2 [Xenopus (Silurana) tropicalis]
gi|213624607|gb|AAI71333.1| ring finger protein 2 [Xenopus (Silurana) tropicalis]
Length = 336
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L N T CLH FC CI
Sbjct: 51 CPICLDMLKNTMTTKECLHRFCADCI 76
>gi|6572993|gb|AAF17506.1|AF196346_1 Ring finger protein 1b [Danio rerio]
Length = 259
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L N T CLH FC CI
Sbjct: 51 CPICLDMLKNTMTTKECLHRFCADCI 76
>gi|357128851|ref|XP_003566083.1| PREDICTED: uncharacterized protein LOC100846593 [Brachypodium
distachyon]
Length = 917
Score = 36.6 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 23/48 (47%)
Query: 47 RCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQR 94
+CPICL ++ CLH FC CI + ++ + PA K R
Sbjct: 122 QCPICLGIIRKTRTVMECLHRFCRDCIDKSMRLGNNECPACRTHCKSR 169
>gi|410924147|ref|XP_003975543.1| PREDICTED: E3 ubiquitin-protein ligase RING2-like [Takifugu
rubripes]
Length = 342
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 25/49 (51%), Gaps = 6/49 (12%)
Query: 31 PSEDDSDG-DRPTSPTS-----RCPICLLVLNNRSYTDTCLHEFCFLCI 73
P E +DG + SP S CPICL +L N T CLH FC CI
Sbjct: 28 PQEAITDGLEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCI 76
>gi|357112604|ref|XP_003558098.1| PREDICTED: uncharacterized protein LOC100839333 [Brachypodium
distachyon]
Length = 750
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 8/73 (10%)
Query: 47 RCPICL---LVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRLLLFASATE 103
RC ICL + + D C H FCF CI +WS++ S C + K+R +++
Sbjct: 406 RCGICLSEDQKMTLQGVLDCCSHFFCFACIMEWSRVESR-----CPLCKRRFTTITKSSK 460
Query: 104 CLQYINVYDIMIL 116
+ + + +I+
Sbjct: 461 VDLRLELKNSVIM 473
>gi|351700358|gb|EHB03277.1| SFRS2-interacting protein, partial [Heterocephalus glaber]
Length = 1440
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Query: 43 SPTSRCPICL--LVLNNRSYTDTCLHEFCFLCIKQWSQI 79
S RCPICL L+ + ++C H FC CI +W++
Sbjct: 16 SEADRCPICLTCLLEKEVGFPESCNHVFCMTCILKWAET 54
>gi|330803158|ref|XP_003289576.1| hypothetical protein DICPUDRAFT_153973 [Dictyostelium purpureum]
gi|325080333|gb|EGC33893.1| hypothetical protein DICPUDRAFT_153973 [Dictyostelium purpureum]
Length = 425
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 37/73 (50%), Gaps = 8/73 (10%)
Query: 45 TSRCPICLLVLN--NRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRLLLFASAT 102
+ C IC + +N N S + C H FC C+++W ++++ + P LC R +
Sbjct: 286 NNECCICYIKMNTTNTSTIEICSHNFCNECVRKWCKLNNNTCP-LC-----RKEFYFIQR 339
Query: 103 ECLQYINVYDIMI 115
E I++YD+ +
Sbjct: 340 EGQVKISIYDVKL 352
>gi|330841389|ref|XP_003292681.1| hypothetical protein DICPUDRAFT_83293 [Dictyostelium purpureum]
gi|325077052|gb|EGC30791.1| hypothetical protein DICPUDRAFT_83293 [Dictyostelium purpureum]
Length = 428
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Query: 47 RCPICL-LVLNNRSYTDTCLHEFCFLCIKQWSQ 78
+C ICL V N CLH+FC+ CI+QWS+
Sbjct: 367 KCTICLNFVDTNEMGIIDCLHKFCYNCIEQWSR 399
>gi|302786764|ref|XP_002975153.1| hypothetical protein SELMODRAFT_415214 [Selaginella moellendorffii]
gi|300157312|gb|EFJ23938.1| hypothetical protein SELMODRAFT_415214 [Selaginella moellendorffii]
Length = 497
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 19/30 (63%)
Query: 63 TCLHEFCFLCIKQWSQISSESSPALCKMSK 92
C H+FCF CIK+WSQ S ++ C + K
Sbjct: 366 ACGHQFCFDCIKKWSQHSGSANTPKCPLCK 395
>gi|297281250|ref|XP_001108188.2| PREDICTED: e3 ubiquitin-protein ligase RING2-like [Macaca
mulatta]
Length = 206
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L N T CLH FC CI
Sbjct: 51 CPICLDMLKNTMTTKECLHRFCADCI 76
>gi|325180427|emb|CCA14832.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 601
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
Query: 8 QTQKRRLELPEIQQASKKQKNDNPSEDDSDGDRPTSPTSRCPICLLVLNNRSY----TDT 63
+ + R + + + + K +D+ S SD D P +PTSR + L N++Y +DT
Sbjct: 2 EAKGRSFHIEDDPKKASKMSSDDESAAHSDSDEPGAPTSRV-VALRHGYNQTYIIRSSDT 60
Query: 64 CLHEFCFLC 72
+HE F C
Sbjct: 61 TMHEVLFRC 69
>gi|311264978|ref|XP_003130427.1| PREDICTED: E3 ubiquitin-protein ligase RING2-like isoform 1 [Sus
scrofa]
Length = 336
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L N T CLH FC CI
Sbjct: 51 CPICLDMLKNTMTTKECLHRFCADCI 76
>gi|117676384|ref|NP_004710.2| protein SCAF11 [Homo sapiens]
gi|251757337|sp|Q99590.2|SCAFB_HUMAN RecName: Full=Protein SCAF11; AltName: Full=CTD-associated SR
protein 11; AltName: Full=Renal carcinoma antigen
NY-REN-40; AltName: Full=SC35-interacting protein 1;
AltName: Full=SR-related and CTD-associated factor 11;
AltName: Full=SRSF2-interacting protein; AltName:
Full=Serine/arginine-rich splicing factor 2-interacting
protein; AltName: Full=Splicing factor,
arginine/serine-rich 2-interacting protein; AltName:
Full=Splicing regulatory protein 129; Short=SRrp129
gi|119578298|gb|EAW57894.1| splicing factor, arginine/serine-rich 2, interacting protein,
isoform CRA_c [Homo sapiens]
gi|146327184|gb|AAI41553.1| Splicing factor, arginine/serine-rich 2, interacting protein
[synthetic construct]
Length = 1463
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Query: 43 SPTSRCPICL--LVLNNRSYTDTCLHEFCFLCIKQWSQI 79
S RCPICL L+ + ++C H FC CI +W++
Sbjct: 36 SEADRCPICLNCLLEKEVGFPESCNHVFCMTCILKWAET 74
>gi|256079124|ref|XP_002575840.1| zinc finger protein [Schistosoma mansoni]
Length = 748
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 47 RCPICLLVLNNRSYT-DTCLHEFCFLCIKQWSQISSE 82
+CPIC + T ++C H FC++C+K+WS++ E
Sbjct: 88 QCPICCERIRKPVATPESCNHAFCYICLKEWSRVRHE 124
>gi|148908487|gb|ABR17356.1| unknown [Picea sitchensis]
Length = 346
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 12/68 (17%)
Query: 32 SEDDSDGDRPTS-------PTSRCPICL---LVLNNRSYTDTCLHEFCFLCIKQWSQISS 81
S DD + D P+ P S CPICL + C+H+FC CI WS +
Sbjct: 47 SSDDHNTDSPSKLPNIPQDPASSCPICLGNDIHQTQLVVLRLCMHQFCVKCIHTWSALQR 106
Query: 82 ESSPALCK 89
+ LCK
Sbjct: 107 KC--PLCK 112
>gi|432859919|ref|XP_004069301.1| PREDICTED: uncharacterized protein LOC101164799 [Oryzias latipes]
Length = 525
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 15/93 (16%)
Query: 5 LFRQTQKRRLELPEIQQASKKQKNDNPSEDDSDGDRPT---------SPTSRCPICLLVL 55
L++++ L L ++Q AS + + ED+S+ RP S CPICL
Sbjct: 295 LYQKSITSPLNLTQLQGASGFRDSTTMHEDESE-KRPVPEGGATGGDSTEENCPICLSPF 353
Query: 56 NNRSYTDTCLHEFCFLCIKQWSQISSESSPALC 88
++ + C HEFC LC++Q + ES+ +C
Sbjct: 354 TDKKSLN-CKHEFCNLCLQQ----AKESNGPIC 381
>gi|387019653|gb|AFJ51944.1| e3 ubiquitin-protein ligase RING2-like [Crotalus adamanteus]
Length = 336
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L N T CLH FC CI
Sbjct: 51 CPICLDMLKNTMTTKECLHRFCADCI 76
>gi|348580725|ref|XP_003476129.1| PREDICTED: protein SCAF11-like [Cavia porcellus]
Length = 1535
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Query: 43 SPTSRCPICL--LVLNNRSYTDTCLHEFCFLCIKQWSQI 79
S RCPICL L+ + ++C H FC CI +W++
Sbjct: 36 SEADRCPICLNYLLEKEVGFPESCNHVFCMTCILKWAET 74
>gi|208965570|dbj|BAG72799.1| splicing factor, arginine/serine-rich 2, interacting protein
[synthetic construct]
Length = 1463
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Query: 43 SPTSRCPICL--LVLNNRSYTDTCLHEFCFLCIKQWSQI 79
S RCPICL L+ + ++C H FC CI +W++
Sbjct: 36 SEADRCPICLNCLLEKEVGFPESCNHVFCMTCILKWAET 74
>gi|124487443|ref|NP_001074587.1| PHD and RING finger domain-containing protein 1 [Mus musculus]
gi|215275613|sp|A6H619.2|PHRF1_MOUSE RecName: Full=PHD and RING finger domain-containing protein 1
Length = 1682
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Query: 48 CPICLLVLNNRSY--TDTCLHEFCFLCIKQWSQ 78
CPICL +++ +TC H FC CI +WS+
Sbjct: 109 CPICLNAFRDQAVGTPETCAHYFCLDCIIEWSR 141
>gi|345316757|ref|XP_001506883.2| PREDICTED: E3 ubiquitin-protein ligase RING1-like
[Ornithorhynchus anatinus]
Length = 160
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 24/49 (48%), Gaps = 6/49 (12%)
Query: 31 PSEDDSDGDR-PTSPTS-----RCPICLLVLNNRSYTDTCLHEFCFLCI 73
PSE DG SP S CPICL +L N T CLH FC CI
Sbjct: 33 PSEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCI 81
>gi|327277423|ref|XP_003223464.1| PREDICTED: e3 ubiquitin-protein ligase RING2-like [Anolis
carolinensis]
Length = 336
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L N T CLH FC CI
Sbjct: 51 CPICLDMLKNTMTTKECLHRFCADCI 76
>gi|426372264|ref|XP_004053046.1| PREDICTED: protein SCAF11 [Gorilla gorilla gorilla]
Length = 1463
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Query: 43 SPTSRCPICL--LVLNNRSYTDTCLHEFCFLCIKQWSQ 78
S RCPICL L+ + ++C H FC CI +W++
Sbjct: 36 SEADRCPICLNCLLEKEVGFPESCNHVFCMTCILKWAE 73
>gi|302506409|ref|XP_003015161.1| hypothetical protein ARB_06284 [Arthroderma benhamiae CBS 112371]
gi|291178733|gb|EFE34521.1| hypothetical protein ARB_06284 [Arthroderma benhamiae CBS 112371]
Length = 373
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Query: 41 PTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQ 78
P P +C +CL + S + TC H FC+ CI+ W Q
Sbjct: 315 PAGPQRKCTLCLDPFKDPSVS-TCGHVFCWTCIRDWVQ 351
>gi|431901418|gb|ELK08444.1| SFRS2-interacting protein, partial [Pteropus alecto]
Length = 1457
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Query: 43 SPTSRCPICL--LVLNNRSYTDTCLHEFCFLCIKQWSQI 79
S RCPICL L+ + ++C H FC CI +W++
Sbjct: 43 SEADRCPICLNCLLEKEVGFPESCNHVFCMTCILKWAET 81
>gi|410264404|gb|JAA20168.1| SR-related CTD-associated factor 11 [Pan troglodytes]
gi|410264406|gb|JAA20169.1| SR-related CTD-associated factor 11 [Pan troglodytes]
gi|410264408|gb|JAA20170.1| SR-related CTD-associated factor 11 [Pan troglodytes]
gi|410264410|gb|JAA20171.1| SR-related CTD-associated factor 11 [Pan troglodytes]
gi|410264412|gb|JAA20172.1| SR-related CTD-associated factor 11 [Pan troglodytes]
gi|410339935|gb|JAA38914.1| SR-related CTD-associated factor 11 [Pan troglodytes]
Length = 1463
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Query: 43 SPTSRCPICL--LVLNNRSYTDTCLHEFCFLCIKQWSQI 79
S RCPICL L+ + ++C H FC CI +W++
Sbjct: 36 SEADRCPICLNCLLEKEVGFPESCNHVFCMTCILKWAET 74
>gi|307147576|gb|ADN37676.1| RING1.B [Oncorhynchus mykiss]
Length = 381
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L N T CLH FC CI
Sbjct: 48 CPICLDMLKNTMTTKECLHRFCSDCI 73
>gi|332839598|ref|XP_001165201.2| PREDICTED: protein SCAF11 isoform 8 [Pan troglodytes]
gi|410221276|gb|JAA07857.1| SR-related CTD-associated factor 11 [Pan troglodytes]
gi|410221278|gb|JAA07858.1| SR-related CTD-associated factor 11 [Pan troglodytes]
gi|410305400|gb|JAA31300.1| SR-related CTD-associated factor 11 [Pan troglodytes]
gi|410305402|gb|JAA31301.1| SR-related CTD-associated factor 11 [Pan troglodytes]
Length = 1463
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Query: 43 SPTSRCPICL--LVLNNRSYTDTCLHEFCFLCIKQWSQI 79
S RCPICL L+ + ++C H FC CI +W++
Sbjct: 36 SEADRCPICLNCLLEKEVGFPESCNHVFCMTCILKWAET 74
>gi|291229732|ref|XP_002734826.1| PREDICTED: ring finger protein 2-like [Saccoglossus kowalevskii]
Length = 300
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 24/49 (48%), Gaps = 6/49 (12%)
Query: 31 PSEDDSDGDR-PTSPTS-----RCPICLLVLNNRSYTDTCLHEFCFLCI 73
P E +DG SP S CPICL +L N T CLH FC CI
Sbjct: 29 PQEAITDGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCQECI 77
>gi|449517745|ref|XP_004165905.1| PREDICTED: uncharacterized protein LOC101229320 [Cucumis sativus]
Length = 845
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 8/71 (11%)
Query: 48 CPICLLVLNNRSYTDT---CLHEFCFLCIKQWSQISSESSPALCKMSKQRLLLFASATEC 104
C ICL + R T C H FCF CI +W+++ S C + KQR +
Sbjct: 340 CGICLSEEDKRRVRGTLNCCSHFFCFSCIMEWAKVESR-----CPLCKQRFQTISKPGRS 394
Query: 105 LQYINVYDIMI 115
I++ + ++
Sbjct: 395 TAGIDLREFVV 405
>gi|311256485|ref|XP_003126672.1| PREDICTED: protein SCAF11 [Sus scrofa]
Length = 1455
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Query: 43 SPTSRCPICL--LVLNNRSYTDTCLHEFCFLCIKQWSQI 79
S RCPICL L+ + ++C H FC CI +W++
Sbjct: 36 SEADRCPICLSCLLEKEIGFPESCNHVFCLTCILKWAET 74
>gi|256079126|ref|XP_002575841.1| zinc finger protein [Schistosoma mansoni]
Length = 706
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 47 RCPICLLVLNNRSYT-DTCLHEFCFLCIKQWSQISSE 82
+CPIC + T ++C H FC++C+K+WS++ E
Sbjct: 88 QCPICCERIRKPVATPESCNHAFCYICLKEWSRVRHE 124
>gi|148222454|ref|NP_001090794.1| ring finger protein 1 [Xenopus (Silurana) tropicalis]
gi|134025969|gb|AAI35192.1| ring1 protein [Xenopus (Silurana) tropicalis]
Length = 344
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L N T CLH FC CI
Sbjct: 48 CPICLDMLKNTMTTKECLHRFCSDCI 73
>gi|354495369|ref|XP_003509803.1| PREDICTED: PHD and RING finger domain-containing protein 1-like
isoform 1 [Cricetulus griseus]
Length = 1683
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Query: 48 CPICLLVLNNRSY--TDTCLHEFCFLCIKQWSQ 78
CPICL +++ +TC H FC CI +WS+
Sbjct: 109 CPICLNAFRDQAVGTPETCAHYFCLDCIIEWSR 141
>gi|347837214|emb|CCD51786.1| hypothetical protein [Botryotinia fuckeliana]
Length = 314
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 24/58 (41%), Gaps = 1/58 (1%)
Query: 32 SEDDSDGDRPTSPTSRCPICLLVLNNR-SYTDTCLHEFCFLCIKQWSQISSESSPALC 88
S G+RP S CPIC L + + C H FC C+ W E A+C
Sbjct: 228 SPGKKGGERPREQKSTCPICTDELPAKVAVAKPCKHRFCKSCLADWMVHLGEGKEAIC 285
>gi|344249430|gb|EGW05534.1| PHD and RING finger domain-containing protein 1 [Cricetulus
griseus]
Length = 1687
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Query: 48 CPICLLVLNNRSY--TDTCLHEFCFLCIKQWSQ 78
CPICL +++ +TC H FC CI +WS+
Sbjct: 109 CPICLNAFRDQAVGTPETCAHYFCLDCIIEWSR 141
>gi|327304691|ref|XP_003237037.1| peroxisome biosynthesis protein [Trichophyton rubrum CBS 118892]
gi|326460035|gb|EGD85488.1| peroxisome biosynthesis protein [Trichophyton rubrum CBS 118892]
Length = 373
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Query: 41 PTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQ 78
P P +C +CL + S + TC H FC+ CI+ W Q
Sbjct: 315 PAGPQRKCTLCLDPFKDPSVS-TCGHVFCWTCIRDWVQ 351
>gi|195397519|ref|XP_002057376.1| GJ16377 [Drosophila virilis]
gi|194147143|gb|EDW62862.1| GJ16377 [Drosophila virilis]
Length = 273
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 17 PEIQQASKKQKNDNP-SEDDSDGDRPTSPTSRCPICLLVLNNR-SYTDTCLHEFCFLCIK 74
P A ++ + P D + D P+ +CPICL ++ R T +C H FC+ CI
Sbjct: 187 PPCASAPQRHDQNKPRGRDITASDYGDEPSHKCPICLESVSGRQPATTSCGHVFCYPCIL 246
Query: 75 QWSQIS 80
++S
Sbjct: 247 AVVRVS 252
>gi|119578297|gb|EAW57893.1| splicing factor, arginine/serine-rich 2, interacting protein,
isoform CRA_b [Homo sapiens]
Length = 1398
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Query: 43 SPTSRCPICL--LVLNNRSYTDTCLHEFCFLCIKQWSQI 79
S RCPICL L+ + ++C H FC CI +W++
Sbjct: 36 SEADRCPICLNCLLEKEVGFPESCNHVFCMTCILKWAET 74
>gi|358056222|dbj|GAA97829.1| hypothetical protein E5Q_04508 [Mixia osmundae IAM 14324]
Length = 513
Score = 36.6 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 27/64 (42%)
Query: 22 ASKKQKNDNPSEDDSDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISS 81
A +K N + D PT P CPIC +L + C FC CI+ + + +S
Sbjct: 268 AQRKTGRKNLTPADVQNLEPTDPDLSCPICAKLLKDAVIVPCCSTSFCETCIRPYLEKNS 327
Query: 82 ESSP 85
P
Sbjct: 328 MICP 331
>gi|215275614|sp|Q63625.2|PHRF1_RAT RecName: Full=PHD and RING finger domain-containing protein 1;
AltName: Full=CTD-binding SR-like protein rA9
Length = 1685
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Query: 48 CPICLLVLNNRSY--TDTCLHEFCFLCIKQWSQ 78
CPICL +++ +TC H FC CI +WS+
Sbjct: 109 CPICLNAFRDQAVGTPETCAHYFCLDCIIEWSR 141
>gi|63034003|gb|AAY27978.1| tumor necrosis factor receptor associated factor 6 [Euprymna
scolopes]
Length = 555
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Query: 32 SEDDSDGDRPTSPTSR--CPICLLVLNNRSYTDTCLHEFCFLCIKQW 76
+++ D D +P +R CPICLL+L + T C H FC CI++W
Sbjct: 2 NKEGYDLDFEPTPENRYECPICLLILRDPMQT-VCGHRFCKCCIERW 47
>gi|326472993|gb|EGD97002.1| peroxisome biosynthesis protein [Trichophyton tonsurans CBS 112818]
Length = 373
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Query: 41 PTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQ 78
P P +C +CL + S + TC H FC+ CI+ W Q
Sbjct: 315 PAGPQRKCTLCLDPFKDPSVS-TCGHVFCWTCIRDWVQ 351
>gi|119587187|gb|EAW66783.1| ring finger protein 166, isoform CRA_c [Homo sapiens]
Length = 210
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Query: 22 ASKKQKNDNPSEDDSDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISS 81
AS +Q+ P + GD CPICL V + +C H FC C++ Q+ S
Sbjct: 9 ASAQQRQ--PPAGPAGGDSGLEAQYTCPICLEVYHRPVAIGSCGHTFCGECLQPCLQVPS 66
Query: 82 ESSPALCKM 90
P LC++
Sbjct: 67 PLCP-LCRL 74
>gi|302665604|ref|XP_003024411.1| hypothetical protein TRV_01374 [Trichophyton verrucosum HKI 0517]
gi|291188464|gb|EFE43800.1| hypothetical protein TRV_01374 [Trichophyton verrucosum HKI 0517]
Length = 373
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Query: 41 PTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQ 78
P P +C +CL + S + TC H FC+ CI+ W Q
Sbjct: 315 PAGPQRKCTLCLDPFKDPSVS-TCGHVFCWTCIRDWVQ 351
>gi|194381132|dbj|BAG64134.1| unnamed protein product [Homo sapiens]
Length = 992
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Query: 43 SPTSRCPICL--LVLNNRSYTDTCLHEFCFLCIKQWSQI 79
S RCPICL L+ + ++C H FC CI +W++
Sbjct: 36 SEADRCPICLNCLLEKEVGFPESCNHVFCMTCILKWAET 74
>gi|302844741|ref|XP_002953910.1| hypothetical protein VOLCADRAFT_118534 [Volvox carteri f.
nagariensis]
gi|300260722|gb|EFJ44939.1| hypothetical protein VOLCADRAFT_118534 [Volvox carteri f.
nagariensis]
Length = 693
Score = 36.6 bits (83), Expect = 3.6, Method: Composition-based stats.
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 44 PTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPAL 87
P CP+C+ +L + T C H FC C ++W+ +S+ L
Sbjct: 81 PCDCCPLCMHILYD-PVTTPCSHTFCGRCFRRWADVSNRGRNGL 123
>gi|224028825|gb|ACN33488.1| unknown [Zea mays]
Length = 550
Score = 36.6 bits (83), Expect = 3.6, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Query: 32 SEDDSDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQI-SSESSPALCK 89
SEDD ++P C IC + + T +C H FC+ C+ QW + SS +CK
Sbjct: 217 SEDDGTEHGKSAPMFECNICFEMADEPVVT-SCGHLFCWPCLYQWLHVHSSHKECPVCK 274
>gi|354495371|ref|XP_003509804.1| PREDICTED: PHD and RING finger domain-containing protein 1-like
isoform 2 [Cricetulus griseus]
Length = 1658
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Query: 48 CPICLLVLNNRSY--TDTCLHEFCFLCIKQWSQ 78
CPICL +++ +TC H FC CI +WS+
Sbjct: 109 CPICLNAFRDQAVGTPETCAHYFCLDCIIEWSR 141
>gi|326477310|gb|EGE01320.1| peroxisome assembly protein 10 [Trichophyton equinum CBS 127.97]
Length = 373
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Query: 41 PTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQ 78
P P +C +CL + S + TC H FC+ CI+ W Q
Sbjct: 315 PAGPQRKCTLCLDPFKDPSVS-TCGHVFCWTCIRDWVQ 351
>gi|260182172|gb|ACX35600.1| RING1 [Salmo salar]
Length = 387
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L N T CLH FC CI
Sbjct: 48 CPICLDMLKNTMTTKECLHRFCSDCI 73
>gi|291190270|ref|NP_001167351.1| E3 ubiquitin-protein ligase RING2-A [Salmo salar]
gi|223649380|gb|ACN11448.1| E3 ubiquitin-protein ligase RING2-A [Salmo salar]
Length = 388
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L N T CLH FC CI
Sbjct: 48 CPICLDMLKNTMTTKECLHRFCSDCI 73
>gi|426224633|ref|XP_004006473.1| PREDICTED: protein SCAF11 [Ovis aries]
Length = 1456
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Query: 43 SPTSRCPICL--LVLNNRSYTDTCLHEFCFLCIKQWSQ 78
S RCPICL L+ + ++C H FC CI +W++
Sbjct: 36 SEADRCPICLSCLLEKEIGFPESCNHVFCLTCILKWAE 73
>gi|74207028|dbj|BAE33300.1| unnamed protein product [Mus musculus]
Length = 406
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L N T CLH FC CI
Sbjct: 48 CPICLDMLKNTMTTKECLHRFCSDCI 73
>gi|410912387|ref|XP_003969671.1| PREDICTED: TNF receptor-associated factor 6-like [Takifugu
rubripes]
Length = 564
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 35 DSDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKM-SKQ 93
D + D P CPICL+ L N T C H FC +CI++ + + + P +M SK+
Sbjct: 66 DVEFDPPLESKYECPICLMALRNAIQT-PCGHRFCKICIEKSIRDAGQRCPVDNEMLSKE 124
Query: 94 RLL 96
+L
Sbjct: 125 QLF 127
>gi|115452537|ref|NP_001049869.1| Os03g0302200 [Oryza sativa Japonica Group]
gi|108707699|gb|ABF95494.1| PHD-finger family protein, expressed [Oryza sativa Japonica Group]
gi|108707700|gb|ABF95495.1| PHD-finger family protein, expressed [Oryza sativa Japonica Group]
gi|108707701|gb|ABF95496.1| PHD-finger family protein, expressed [Oryza sativa Japonica Group]
gi|113548340|dbj|BAF11783.1| Os03g0302200 [Oryza sativa Japonica Group]
gi|125585964|gb|EAZ26628.1| hypothetical protein OsJ_10531 [Oryza sativa Japonica Group]
Length = 799
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 5/45 (11%)
Query: 48 CPICLLV---LNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCK 89
C ICL + + D C H FCF CI QWS++ ES LCK
Sbjct: 413 CGICLSEEQRVTVQGVLDCCSHYFCFACIMQWSKV--ESRCPLCK 455
>gi|449283611|gb|EMC90216.1| E3 ubiquitin-protein ligase Topor [Columba livia]
Length = 504
Score = 36.6 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 17/64 (26%)
Query: 32 SEDDSDGDRPTSPTSR-----------------CPICLLVLNNRSYTDTCLHEFCFLCIK 74
SE+DS D +SP + CPIC +++++ C H FC+ CI
Sbjct: 75 SEEDSPSDGTSSPAASTSQEPQATPLDASDNLMCPICQDSIHDQASVSWCGHLFCYACIL 134
Query: 75 QWSQ 78
+WS+
Sbjct: 135 EWSR 138
>gi|329663319|ref|NP_001192496.1| protein SCAF11 [Bos taurus]
gi|296487771|tpg|DAA29884.1| TPA: splicing factor, arginine/serine-rich 2, interacting protein
[Bos taurus]
Length = 1453
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Query: 43 SPTSRCPICL--LVLNNRSYTDTCLHEFCFLCIKQWSQ 78
S RCPICL L+ + ++C H FC CI +W++
Sbjct: 36 SEADRCPICLSCLLEKEIGFPESCNHVFCLTCILKWAE 73
>gi|320163269|gb|EFW40168.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 464
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Query: 45 TSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKM 90
+++C ICL R TC H FC CI+ W+ +++ +CK+
Sbjct: 35 SAQCVICLSSFTERGRLPTCPHLFCAPCIQAWADVNNACP--MCKL 78
>gi|301770957|ref|XP_002920895.1| PREDICTED: e3 ubiquitin-protein ligase RING2-like [Ailuropoda
melanoleuca]
Length = 356
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L N T CLH FC CI
Sbjct: 51 CPICLDMLKNTMTTKECLHRFCADCI 76
>gi|118778018|ref|XP_564794.2| AGAP007458-PA [Anopheles gambiae str. PEST]
gi|116132180|gb|EAL41789.2| AGAP007458-PA [Anopheles gambiae str. PEST]
Length = 454
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 34/74 (45%), Gaps = 15/74 (20%)
Query: 23 SKKQKNDNPSEDDSDGDRPTSPTSRCPICLLVLNNRSYTDT-CLHEFCFLCIKQWSQISS 81
+ Q NDNPS T CPIC L +R T C H FC CIK+ Q++
Sbjct: 381 TNSQPNDNPS---------TGKDIICPICYESLADRPVLSTICGHLFCADCIKRAQQLTK 431
Query: 82 ESSPALCKMSKQRL 95
+ C M K++L
Sbjct: 432 Q-----CPMCKRKL 440
>gi|432089360|gb|ELK23311.1| E3 ubiquitin-protein ligase RING2 [Myotis davidii]
Length = 397
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 25/49 (51%), Gaps = 6/49 (12%)
Query: 31 PSEDDSDG-DRPTSPTS-----RCPICLLVLNNRSYTDTCLHEFCFLCI 73
P E +DG + SP S CPICL +L N T CLH FC CI
Sbjct: 89 PQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCI 137
>gi|313236181|emb|CBY11505.1| unnamed protein product [Oikopleura dioica]
Length = 226
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 16/29 (55%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCIKQW 76
CPIC VL N Y C H FC CI +W
Sbjct: 19 CPICRGVLENVIYAPKCEHAFCSDCIHEW 47
>gi|121711301|ref|XP_001273266.1| peroxisome biosynthesis protein (Peroxin-10), putative [Aspergillus
clavatus NRRL 1]
gi|119401417|gb|EAW11840.1| peroxisome biosynthesis protein (Peroxin-10), putative [Aspergillus
clavatus NRRL 1]
Length = 376
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 6/57 (10%)
Query: 41 PTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRLLL 97
P+ S+C +CL + S T TC H FC+ C++ W + E C + +Q +LL
Sbjct: 318 PSGQQSKCTLCLESYKDPSVT-TCGHVFCWTCVRDWVREKPE-----CPLCRQEVLL 368
>gi|218201147|gb|EEC83574.1| hypothetical protein OsI_29232 [Oryza sativa Indica Group]
Length = 818
Score = 36.6 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 25/98 (25%), Positives = 42/98 (42%), Gaps = 11/98 (11%)
Query: 6 FRQTQKRRLELPEIQQASKKQKNDNPSEDDSDGDRPTS---PTSR-------CPICLLVL 55
F+ + R E + + + D ++DD GD + TSR C IC
Sbjct: 618 FQPSDSSRQEPAFCTEKTNQGSIDIAADDDKGGDEKATLEESTSRQGQAELSCVICWTDF 677
Query: 56 NNRSYTDTCLHEFCFLCIKQWS-QISSESSPALCKMSK 92
++ C H FC+ CI++W+ +SS + C + K
Sbjct: 678 SSTRGILPCGHRFCYSCIQEWADSLSSRGKVSTCPLCK 715
>gi|90101656|sp|Q7ZWM8.2|RNG2B_XENLA RecName: Full=E3 ubiquitin-protein ligase RING2-B; AltName:
Full=RING finger protein 1B-B; Short=RING1b-B; AltName:
Full=RING finger protein 2-B
Length = 343
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L N T CLH FC CI
Sbjct: 47 CPICLDMLKNTMTTKECLHRFCSDCI 72
>gi|449682260|ref|XP_002161941.2| PREDICTED: E3 ubiquitin-protein ligase RING2-like [Hydra
magnipapillata]
Length = 325
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L N T CLH FC CI
Sbjct: 48 CPICLDMLTNTMTTKECLHRFCHDCI 73
>gi|380793389|gb|AFE68570.1| E3 ubiquitin-protein ligase RING1, partial [Macaca mulatta]
Length = 213
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L N T CLH FC CI
Sbjct: 48 CPICLDMLKNTMTTKECLHRFCSDCI 73
>gi|226958428|ref|NP_033092.3| E3 ubiquitin-protein ligase RING1 [Mus musculus]
gi|92090635|sp|O35730.2|RING1_MOUSE RecName: Full=E3 ubiquitin-protein ligase RING1; AltName:
Full=Polycomb complex protein RING1; AltName: Full=RING
finger protein 1; AltName: Full=Transcription repressor
Ring1A
gi|74192043|dbj|BAE32956.1| unnamed protein product [Mus musculus]
Length = 406
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L N T CLH FC CI
Sbjct: 48 CPICLDMLKNTMTTKECLHRFCSDCI 73
>gi|334348166|ref|XP_001374915.2| PREDICTED: protein SCAF11 [Monodelphis domestica]
Length = 1456
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 41 PTSPTSRCPICL--LVLNNRSYTDTCLHEFCFLCIKQWSQI 79
P RCPICL ++ + + C H FC CI +W++
Sbjct: 33 PYEEADRCPICLSCIIEKEVGFPENCNHIFCITCILKWAET 73
>gi|334323602|ref|XP_003340414.1| PREDICTED: LOW QUALITY PROTEIN: e3 ubiquitin-protein ligase
RING1-like [Monodelphis domestica]
Length = 408
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L N T CLH FC CI
Sbjct: 48 CPICLDMLKNTMTTKECLHRFCSDCI 73
>gi|125543530|gb|EAY89669.1| hypothetical protein OsI_11202 [Oryza sativa Indica Group]
Length = 792
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 5/45 (11%)
Query: 48 CPICLLV---LNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCK 89
C ICL + + D C H FCF CI QWS++ ES LCK
Sbjct: 406 CGICLSEEQRVTVQGVLDCCSHYFCFACIMQWSKV--ESRCPLCK 448
>gi|402766203|ref|NP_997714.2| E3 ubiquitin-protein ligase RING1 [Rattus norvegicus]
gi|90110054|sp|Q6MGB6.2|RING1_RAT RecName: Full=E3 ubiquitin-protein ligase RING1; AltName:
Full=Polycomb complex protein RING1; AltName: Full=RING
finger protein 1
gi|149043381|gb|EDL96832.1| ring finger protein 1 [Rattus norvegicus]
Length = 406
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L N T CLH FC CI
Sbjct: 48 CPICLDMLKNTMTTKECLHRFCSDCI 73
>gi|344278451|ref|XP_003411007.1| PREDICTED: E3 ubiquitin-protein ligase RING2-like [Loxodonta
africana]
Length = 384
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L N T CLH FC CI
Sbjct: 99 CPICLDMLKNTMTTKECLHRFCADCI 124
>gi|222635399|gb|EEE65531.1| hypothetical protein OsJ_20986 [Oryza sativa Japonica Group]
Length = 1288
Score = 36.6 bits (83), Expect = 3.9, Method: Composition-based stats.
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 4/44 (9%)
Query: 48 CPICLLVLNN--RSYTDTCLHEFCFLCIKQWSQISSESSPALCK 89
C ICL R D C H FCF+CI W+++ ES CK
Sbjct: 27 CGICLTDARRAVRGELDCCAHHFCFVCIMAWARV--ESRCPFCK 68
>gi|145490449|ref|XP_001431225.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124398328|emb|CAK63827.1| unnamed protein product [Paramecium tetraurelia]
Length = 327
Score = 36.6 bits (83), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 42 TSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRL 95
T P CPIC L R+ T C H F LCI W Q ++ P +C+ +R+
Sbjct: 273 TYPPFFCPICQQFLPLRTQTYDCNHRFHALCIDCWIQKGGQTCP-ICRGKLERI 325
>gi|293334651|ref|NP_001169632.1| uncharacterized protein LOC100383513 [Zea mays]
gi|224030543|gb|ACN34347.1| unknown [Zea mays]
gi|413955981|gb|AFW88630.1| hypothetical protein ZEAMMB73_422078 [Zea mays]
Length = 868
Score = 36.2 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 8/59 (13%)
Query: 48 CPICL---LVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRLLLFASATE 103
C ICL L + + C H FCF CI +WS++ S C + KQR +++
Sbjct: 537 CGICLSEELRATVQGVLNCCSHYFCFACIMEWSRVESR-----CPLCKQRFTTITKSSK 590
>gi|147899469|ref|NP_001087647.1| E3 ubiquitin-protein ligase RING2-A [Xenopus laevis]
gi|62900962|sp|Q66J69.1|RNG2A_XENLA RecName: Full=E3 ubiquitin-protein ligase RING2-A; AltName:
Full=RING finger protein 1B-A; Short=RING1b-A; AltName:
Full=RING finger protein 2-A
gi|51704098|gb|AAH81039.1| MGC81738 protein [Xenopus laevis]
Length = 344
Score = 36.2 bits (82), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L N T CLH FC CI
Sbjct: 48 CPICLDMLKNTMTTKECLHRFCSDCI 73
>gi|47224345|emb|CAG09191.1| unnamed protein product [Tetraodon nigroviridis]
Length = 540
Score = 36.2 bits (82), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 8/69 (11%)
Query: 47 RCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRLLLFASATECLQ 106
+C IC + + C H FC CIKQW + E C + +Q +L S T CL
Sbjct: 393 QCIICSELFIEAAVILNCAHSFCCYCIKQWRKKKDE-----CPICRQAIL---SQTRCLA 444
Query: 107 YINVYDIMI 115
N + M+
Sbjct: 445 LDNCINSMV 453
>gi|413945681|gb|AFW78330.1| putative RING/U-box superfamily protein [Zea mays]
Length = 550
Score = 36.2 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Query: 32 SEDDSDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQI-SSESSPALCK 89
SEDD ++P C IC + + T +C H FC+ C+ QW + SS +CK
Sbjct: 217 SEDDGTEHGKSAPMFECNICFEMADEPVVT-SCGHLFCWPCLYQWLHVHSSHKECPVCK 274
>gi|389743536|gb|EIM84720.1| hypothetical protein STEHIDRAFT_140311 [Stereum hirsutum FP-91666
SS1]
Length = 1153
Score = 36.2 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 16/44 (36%), Positives = 22/44 (50%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMS 91
C ICL +R+ +C HEFCF CI W + S C ++
Sbjct: 49 CAICLQSKADRTVLPSCSHEFCFECIVVWCEQSRRCPLCSCLIT 92
>gi|226498124|ref|NP_001147524.1| zinc finger, C3HC4 type family protein [Zea mays]
gi|195611986|gb|ACG27823.1| zinc finger, C3HC4 type family protein [Zea mays]
Length = 550
Score = 36.2 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Query: 32 SEDDSDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQI-SSESSPALCK 89
SEDD ++P C IC + + T +C H FC+ C+ QW + SS +CK
Sbjct: 217 SEDDGTEHGKSAPMFECNICFEMADEPVVT-SCGHLFCWPCLYQWLHVHSSHKECPVCK 274
>gi|48475210|gb|AAT44279.1| putative zinc finger protein [Oryza sativa Japonica Group]
Length = 823
Score = 36.2 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 10/67 (14%)
Query: 29 DNPSEDDSDGDRP---------TSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQI 79
D+PS + SDGD +CPICL ++ CLH FC CI + ++
Sbjct: 87 DSPSSE-SDGDMDEFILVKLMDIRKEVQCPICLGIIRKTRTVMECLHRFCRDCIDKSMRL 145
Query: 80 SSESSPA 86
+ PA
Sbjct: 146 GNNECPA 152
>gi|28422507|gb|AAH46935.1| Rnf2-b protein [Xenopus laevis]
Length = 369
Score = 36.2 bits (82), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L N T CLH FC CI
Sbjct: 73 CPICLDMLKNTMTTKECLHRFCSDCI 98
>gi|296474544|tpg|DAA16659.1| TPA: ring finger protein 1 [Bos taurus]
Length = 382
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L N T CLH FC CI
Sbjct: 48 CPICLDMLKNTMTTKECLHRFCSDCI 73
>gi|46237549|emb|CAE83930.1| ring finger protein 1 [Rattus norvegicus]
gi|133777213|gb|AAH98635.2| Ring finger protein 1 [Rattus norvegicus]
gi|336454745|dbj|BAK40272.1| ring finger protein 1 [Rattus norvegicus]
Length = 377
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L N T CLH FC CI
Sbjct: 19 CPICLDMLKNTMTTKECLHRFCSDCI 44
>gi|2239144|emb|CAA73381.1| transcription repressor Ring1A [Mus musculus]
gi|3811385|gb|AAC69901.1| RING1 [Mus musculus]
gi|148678290|gb|EDL10237.1| mCG23002 [Mus musculus]
Length = 377
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L N T CLH FC CI
Sbjct: 19 CPICLDMLKNTMTTKECLHRFCSDCI 44
>gi|354487574|ref|XP_003505947.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cricetulus
griseus]
gi|344252993|gb|EGW09097.1| E3 ubiquitin-protein ligase RING1 [Cricetulus griseus]
Length = 408
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L N T CLH FC CI
Sbjct: 48 CPICLDMLKNTMTTKECLHRFCSDCI 73
>gi|392588687|gb|EIW78019.1| hypothetical protein CONPUDRAFT_75758 [Coniophora puteana
RWD-64-598 SS2]
Length = 904
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 19/33 (57%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCIKQWSQIS 80
C ICL + + TC HEFCF CI W++ S
Sbjct: 127 CSICLHSKADTTVIPTCSHEFCFECILIWTEQS 159
>gi|355716581|gb|AES05657.1| ring finger protein 1 [Mustela putorius furo]
Length = 348
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L N T CLH FC CI
Sbjct: 23 CPICLDMLKNTMTTKECLHRFCSDCI 48
>gi|145496085|ref|XP_001434034.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124401156|emb|CAK66637.1| unnamed protein product [Paramecium tetraurelia]
Length = 219
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Query: 46 SRCPICLLVLN---NRSYTDTCLHEFCFLCIKQWSQISSESSP 85
CPIC++ L+ N D C H+ C CIK+W++ P
Sbjct: 69 EECPICMMNLDELQNVCEIDVCQHQICLTCIKEWAEKYKTQCP 111
>gi|395533944|ref|XP_003769009.1| PREDICTED: E3 ubiquitin-protein ligase RING1 [Sarcophilus harrisii]
Length = 481
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L N T CLH FC CI
Sbjct: 121 CPICLDMLKNTMTTKECLHRFCSDCI 146
>gi|218197976|gb|EEC80403.1| hypothetical protein OsI_22555 [Oryza sativa Indica Group]
Length = 1223
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Query: 48 CPICLLVLNN--RSYTDTCLHEFCFLCIKQWSQISS 81
C ICL R D C H FCF+CI W+++ S
Sbjct: 26 CGICLTDARRAVRGELDCCAHHFCFVCIMAWARVES 61
>gi|193643335|ref|XP_001944628.1| PREDICTED: RING finger protein 146-like [Acyrthosiphon pisum]
Length = 261
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 10/62 (16%)
Query: 38 GDRPTSPTSRCPICL--LVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRL 95
GD+ TS + CP+CL V R+ C H FCFLC+K ++ ++ C M +Q +
Sbjct: 108 GDKSTSEYNECPVCLGPAVFPVRT---PCGHVFCFLCVKGAARQANR-----CPMCRQHI 159
Query: 96 LL 97
+
Sbjct: 160 PI 161
>gi|157280011|ref|NP_001098521.1| E3 ubiquitin-protein ligase RING1 [Bos taurus]
gi|154426104|gb|AAI51292.1| RING1 protein [Bos taurus]
Length = 407
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L N T CLH FC CI
Sbjct: 48 CPICLDMLKNTMTTKECLHRFCSDCI 73
>gi|145475067|ref|XP_001423556.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124390617|emb|CAK56158.1| unnamed protein product [Paramecium tetraurelia]
Length = 222
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Query: 46 SRCPICLLVLN---NRSYTDTCLHEFCFLCIKQWSQISSESSP 85
CPIC++ L+ N D C H+ C CIK+W++ P
Sbjct: 72 EECPICMMNLDDLQNVCEIDVCKHQICLTCIKEWAEKYKTQCP 114
>gi|426250134|ref|XP_004018793.1| PREDICTED: E3 ubiquitin-protein ligase RING1 [Ovis aries]
Length = 392
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L N T CLH FC CI
Sbjct: 48 CPICLDMLKNTMTTKECLHRFCSDCI 73
>gi|348545246|ref|XP_003460091.1| PREDICTED: E3 ubiquitin-protein ligase RING2-A-like [Oreochromis
niloticus]
Length = 329
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 10/93 (10%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRLLLFASATECLQY 107
CPICL +L N T CLH FC CI + S C +++L+ + L+
Sbjct: 48 CPICLDMLKNTMTTKECLHRFCSDCI----VTALRSGNKECPTCRKKLV----SRRSLRR 99
Query: 108 INVYDIMILQVNTS--TFKGLFGVNIGRIDRLH 138
+ +D +I ++ S ++ I R++RLH
Sbjct: 100 DSNFDALISKIYPSRDEYEAHQRRVIERLNRLH 132
>gi|224008006|ref|XP_002292962.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220971088|gb|EED89423.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 1089
Score = 36.2 bits (82), Expect = 4.3, Method: Composition-based stats.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Query: 20 QQASKKQKNDNPSEDDSDGDRPTSPTSRCPICLLVLNNR--SYTDTCLHEFCFLCIKQWS 77
+S+ +K + + D + T C ICL + + S + C H FCF CI++W+
Sbjct: 743 HSSSEHEKRRSRDDGDLKPEAIDPATVTCCICLDIPTHEELSSINGCSHPFCFTCIEKWA 802
Query: 78 QISSESSPALCK 89
E++ LCK
Sbjct: 803 --DRENTCPLCK 812
>gi|195454048|ref|XP_002074062.1| GK14441 [Drosophila willistoni]
gi|194170147|gb|EDW85048.1| GK14441 [Drosophila willistoni]
Length = 207
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 37/76 (48%), Gaps = 10/76 (13%)
Query: 10 QKRRLELPEIQQASKKQKNDNPSED----DSDGDRPTSPTSRCPICLLVLNNRSYTDT-C 64
Q+RRLE+P+ DNPS DS + + RCP+CL + R T T C
Sbjct: 117 QRRRLEVPDPDCII-----DNPSPPKRTCDSANNSQQDNSYRCPVCLESASQREPTSTKC 171
Query: 65 LHEFCFLCIKQWSQIS 80
H FC +CI+ Q S
Sbjct: 172 GHVFCKVCIQSAIQSS 187
>gi|156408748|ref|XP_001642018.1| predicted protein [Nematostella vectensis]
gi|156229159|gb|EDO49955.1| predicted protein [Nematostella vectensis]
Length = 326
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L N T CLH FC CI
Sbjct: 50 CPICLDMLKNTMTTKECLHRFCQECI 75
>gi|432094621|gb|ELK26127.1| E3 ubiquitin-protein ligase RING1 [Myotis davidii]
Length = 406
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L N T CLH FC CI
Sbjct: 48 CPICLDMLKNTMTTKECLHRFCSDCI 73
>gi|431916878|gb|ELK16638.1| E3 ubiquitin-protein ligase RING1 [Pteropus alecto]
Length = 406
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L N T CLH FC CI
Sbjct: 48 CPICLDMLKNTMTTKECLHRFCSDCI 73
>gi|413924381|gb|AFW64313.1| hypothetical protein ZEAMMB73_321715 [Zea mays]
Length = 489
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 5/44 (11%)
Query: 30 NPSEDDSDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCI 73
P+E++ DR CPIC+ V+ + ++ C H FC++C+
Sbjct: 47 GPAEEEGPADRDL----LCPICMAVIKD-AFLTACGHSFCYMCV 85
>gi|109157342|pdb|2CKL|B Chain B, Ring1b-Bmi1 E3 Catalytic Domain Structure
Length = 165
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 25/49 (51%), Gaps = 6/49 (12%)
Query: 31 PSEDDSDG-DRPTSPTS-----RCPICLLVLNNRSYTDTCLHEFCFLCI 73
P E +DG + SP S CPICL +L N T CLH FC CI
Sbjct: 34 PQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCI 82
>gi|403261548|ref|XP_003923180.1| PREDICTED: E3 ubiquitin-protein ligase RING1 [Saimiri boliviensis
boliviensis]
Length = 406
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L N T CLH FC CI
Sbjct: 48 CPICLDMLKNTMTTKECLHRFCSDCI 73
>gi|297661281|ref|XP_002809193.1| PREDICTED: E3 ubiquitin-protein ligase RING1 isoform 1 [Pongo
abelii]
Length = 406
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L N T CLH FC CI
Sbjct: 48 CPICLDMLKNTMTTKECLHRFCSDCI 73
>gi|219128396|ref|XP_002184400.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217404201|gb|EEC44149.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 400
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 26 QKNDNPSEDDSDGDRPTSPTSRCPICLLVLNNR--SYTDTCLHEFCFLCIKQWSQISSES 83
+K P+ ++D + +P + C IC+ ++ S D C H+FCF CI WS E+
Sbjct: 159 RKKSPPNAIEADLEILEAPLAACCICMCEPDHHEASKIDGCDHKFCFSCIGTWSD--REN 216
Query: 84 SPALCK 89
S LCK
Sbjct: 217 SCPLCK 222
>gi|195501992|ref|XP_002098034.1| GE24161 [Drosophila yakuba]
gi|194184135|gb|EDW97746.1| GE24161 [Drosophila yakuba]
Length = 2286
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Query: 47 RCPICLLVLNNR--SYTDTCLHEFCFLCIKQWSQ 78
+CPICLL + TC H FC CI WS+
Sbjct: 150 KCPICLLTFRQQEIGTPATCEHIFCAACIDAWSR 183
>gi|51479192|ref|NP_002922.2| E3 ubiquitin-protein ligase RING1 [Homo sapiens]
gi|90110053|sp|Q06587.2|RING1_HUMAN RecName: Full=E3 ubiquitin-protein ligase RING1; AltName:
Full=Polycomb complex protein RING1; AltName: Full=RING
finger protein 1; AltName: Full=Really interesting new
gene 1 protein
gi|30354168|gb|AAH51866.1| Ring finger protein 1 [Homo sapiens]
gi|33877354|gb|AAH02922.2| Ring finger protein 1 [Homo sapiens]
gi|66347232|emb|CAI95620.1| ring finger protein 1 [Homo sapiens]
gi|158259733|dbj|BAF82044.1| unnamed protein product [Homo sapiens]
gi|208967344|dbj|BAG73686.1| ring finger protein 1 [synthetic construct]
Length = 406
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L N T CLH FC CI
Sbjct: 48 CPICLDMLKNTMTTKECLHRFCSDCI 73
>gi|397474342|ref|XP_003808641.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RING1
[Pan paniscus]
Length = 406
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L N T CLH FC CI
Sbjct: 48 CPICLDMLKNTMTTKECLHRFCSDCI 73
>gi|395832135|ref|XP_003789131.1| PREDICTED: E3 ubiquitin-protein ligase RING1 [Otolemur garnettii]
Length = 406
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L N T CLH FC CI
Sbjct: 48 CPICLDMLKNTMTTKECLHRFCSDCI 73
>gi|355561586|gb|EHH18218.1| E3 ubiquitin-protein ligase RING1 [Macaca mulatta]
Length = 406
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L N T CLH FC CI
Sbjct: 48 CPICLDMLKNTMTTKECLHRFCSDCI 73
>gi|321459285|gb|EFX70340.1| hypothetical protein DAPPUDRAFT_202413 [Daphnia pulex]
Length = 347
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L N T CLH FC CI
Sbjct: 47 CPICLDMLKNTMTTKECLHRFCSDCI 72
>gi|301757099|ref|XP_002914380.1| PREDICTED: e3 ubiquitin-protein ligase RING1-like [Ailuropoda
melanoleuca]
Length = 406
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L N T CLH FC CI
Sbjct: 48 CPICLDMLKNTMTTKECLHRFCSDCI 73
>gi|194223403|ref|XP_001493432.2| PREDICTED: e3 ubiquitin-protein ligase RING1-like [Equus
caballus]
Length = 406
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L N T CLH FC CI
Sbjct: 48 CPICLDMLKNTMTTKECLHRFCSDCI 73
>gi|195586960|ref|XP_002083235.1| GD13625 [Drosophila simulans]
gi|194195244|gb|EDX08820.1| GD13625 [Drosophila simulans]
Length = 299
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 6/67 (8%)
Query: 10 QKRRLELPEIQQASKKQKNDNPSEDDSDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFC 69
+ +R +L I+QA KK + S D D P +P +C +CL +N S T C H FC
Sbjct: 213 EHKRQQLESIKQAGKKFLQRSSSAKDLD---PNTP--QCILCLEPRSNSSLT-PCGHIFC 266
Query: 70 FLCIKQW 76
+ C+ +W
Sbjct: 267 WSCLLEW 273
>gi|332245586|ref|XP_003271939.1| PREDICTED: E3 ubiquitin-protein ligase RING1 isoform 1 [Nomascus
leucogenys]
gi|402866635|ref|XP_003897484.1| PREDICTED: E3 ubiquitin-protein ligase RING1 [Papio anubis]
gi|426352705|ref|XP_004043850.1| PREDICTED: E3 ubiquitin-protein ligase RING1 [Gorilla gorilla
gorilla]
gi|387542564|gb|AFJ71909.1| E3 ubiquitin-protein ligase RING1 [Macaca mulatta]
gi|410207298|gb|JAA00868.1| ring finger protein 1 [Pan troglodytes]
Length = 406
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L N T CLH FC CI
Sbjct: 48 CPICLDMLKNTMTTKECLHRFCSDCI 73
>gi|298160989|ref|NP_001177164.1| E3 ubiquitin-protein ligase RING1 [Sus scrofa]
gi|147223291|emb|CAN13293.1| ring finger protein 1 [Sus scrofa]
Length = 406
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L N T CLH FC CI
Sbjct: 48 CPICLDMLKNTMTTKECLHRFCSDCI 73
>gi|119587186|gb|EAW66782.1| ring finger protein 166, isoform CRA_b [Homo sapiens]
Length = 162
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Query: 22 ASKKQKNDNPSEDDSDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISS 81
AS +Q+ P + GD CPICL V + +C H FC C++ Q+ S
Sbjct: 7 ASAQQRQ--PPAGPAGGDSGLEAQYTCPICLEVYHRPVAIGSCGHTFCGECLQPCLQVPS 64
Query: 82 ESSPALCKM 90
P LC++
Sbjct: 65 PLCP-LCRL 72
>gi|114326401|ref|NP_001041593.1| E3 ubiquitin-protein ligase RING1 [Canis lupus familiaris]
gi|90110052|sp|Q5TJF3.2|RING1_CANFA RecName: Full=E3 ubiquitin-protein ligase RING1; AltName:
Full=Polycomb complex protein RING1; AltName: Full=RING
finger protein 1; AltName: Full=RING1a
gi|55956947|emb|CAI11434.1| ring finger protein 1 [Canis lupus familiaris]
Length = 406
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L N T CLH FC CI
Sbjct: 48 CPICLDMLKNTMTTKECLHRFCSDCI 73
>gi|417400362|gb|JAA47134.1| Putative e3 ubiquitin ligase [Desmodus rotundus]
Length = 406
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L N T CLH FC CI
Sbjct: 48 CPICLDMLKNTMTTKECLHRFCSDCI 73
>gi|410958904|ref|XP_003986053.1| PREDICTED: E3 ubiquitin-protein ligase RING1 [Felis catus]
Length = 406
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L N T CLH FC CI
Sbjct: 48 CPICLDMLKNTMTTKECLHRFCSDCI 73
>gi|351703542|gb|EHB06461.1| E3 ubiquitin-protein ligase RING1 [Heterocephalus glaber]
Length = 376
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L N T CLH FC CI
Sbjct: 48 CPICLDMLKNTMTTKECLHRFCSDCI 73
>gi|296197865|ref|XP_002746470.1| PREDICTED: E3 ubiquitin-protein ligase RING1 isoform 1
[Callithrix jacchus]
Length = 406
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L N T CLH FC CI
Sbjct: 48 CPICLDMLKNTMTTKECLHRFCSDCI 73
>gi|344298828|ref|XP_003421093.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Loxodonta
africana]
Length = 406
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L N T CLH FC CI
Sbjct: 48 CPICLDMLKNTMTTKECLHRFCSDCI 73
>gi|307104143|gb|EFN52398.1| hypothetical protein CHLNCDRAFT_58861 [Chlorella variabilis]
Length = 559
Score = 36.2 bits (82), Expect = 4.6, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Query: 48 CPICLLVL--NNRSYTDTCLHEFCFLCIKQWSQISSESSPA 86
C ICL L + ++ D C H F F CI++W++ E + A
Sbjct: 8 CAICLAELRPEDEAFLDECWHHFHFACIRRWAECGVEQAAA 48
>gi|281338470|gb|EFB14054.1| hypothetical protein PANDA_002277 [Ailuropoda melanoleuca]
Length = 404
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L N T CLH FC CI
Sbjct: 48 CPICLDMLKNTMTTKECLHRFCSDCI 73
>gi|444729120|gb|ELW69548.1| E3 ubiquitin-protein ligase RING1 [Tupaia chinensis]
Length = 403
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L N T CLH FC CI
Sbjct: 19 CPICLDMLKNTMTTKECLHRFCSDCI 44
>gi|355748462|gb|EHH52945.1| E3 ubiquitin-protein ligase RING1 [Macaca fascicularis]
Length = 401
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L N T CLH FC CI
Sbjct: 48 CPICLDMLKNTMTTKECLHRFCSDCI 73
>gi|327272932|ref|XP_003221238.1| PREDICTED: protein SCAF11-like [Anolis carolinensis]
Length = 1471
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Query: 47 RCPICLLVLNNR--SYTDTCLHEFCFLCIKQWSQI 79
RCPICL L + + + C H FC CI +W++
Sbjct: 41 RCPICLNCLTEQEVGFPENCSHIFCLTCILKWAET 75
>gi|119180129|ref|XP_001241570.1| predicted protein [Coccidioides immitis RS]
Length = 979
Score = 36.2 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Query: 26 QKNDNPSEDDSDGDRPTSPT-SRCPICLL-VLNNRSYTDTCLHEFCFLCIKQWS-QISSE 82
Q N++P + S+ DR SPT +CPIC + +RS C F C+ W+ QI +
Sbjct: 693 QNNNSPQNNASNADRGRSPTPGQCPICQENIGESRSVCRCCRAGFHTSCLNTWANQIGNM 752
Query: 83 SSPAL 87
S L
Sbjct: 753 SRLGL 757
>gi|115467592|ref|NP_001057395.1| Os06g0283200 [Oryza sativa Japonica Group]
gi|55297405|dbj|BAD69258.1| 2x PHD domain containing protein-like [Oryza sativa Japonica
Group]
gi|113595435|dbj|BAF19309.1| Os06g0283200 [Oryza sativa Japonica Group]
gi|215707203|dbj|BAG93663.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 763
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Query: 48 CPICLLVLNN--RSYTDTCLHEFCFLCIKQWSQISS 81
C ICL R D C H FCF+CI W+++ S
Sbjct: 27 CGICLTDARRAVRGELDCCAHHFCFVCIMAWARVES 62
>gi|125490343|ref|NP_001074951.1| E3 ubiquitin-protein ligase RING1 [Pan troglodytes]
gi|169234988|ref|NP_001108431.1| E3 ubiquitin-protein ligase RING1 [Macaca mulatta]
gi|73914062|sp|Q8WMN5.1|RING1_MACMU RecName: Full=E3 ubiquitin-protein ligase RING1; AltName:
Full=Polycomb complex protein RING1; AltName: Full=RING
finger protein 1
gi|146325684|sp|A1YFY1.1|RING1_PANPA RecName: Full=E3 ubiquitin-protein ligase RING1; AltName:
Full=Polycomb complex protein RING1; AltName: Full=RING
finger protein 1
gi|146325685|sp|A2T6X5.1|RING1_PANTR RecName: Full=E3 ubiquitin-protein ligase RING1; AltName:
Full=Polycomb complex protein RING1; AltName: Full=RING
finger protein 1
gi|17826764|emb|CAD18905.1| ring finger protein 1 [Macaca mulatta]
gi|121483824|gb|ABM54206.1| RING1 [Pan paniscus]
gi|124111107|gb|ABM91930.1| RING1 [Pan troglodytes]
Length = 377
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L N T CLH FC CI
Sbjct: 19 CPICLDMLKNTMTTKECLHRFCSDCI 44
>gi|194898789|ref|XP_001978950.1| GG10942 [Drosophila erecta]
gi|190650653|gb|EDV47908.1| GG10942 [Drosophila erecta]
Length = 2287
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Query: 47 RCPICLLVLNNR--SYTDTCLHEFCFLCIKQWSQ 78
+CPICLL + TC H FC CI WS+
Sbjct: 150 KCPICLLTFRQQEIGTPATCEHIFCAACIDAWSR 183
>gi|146325683|sp|A1YER5.1|RING1_GORGO RecName: Full=E3 ubiquitin-protein ligase RING1; AltName:
Full=Polycomb complex protein RING1; AltName: Full=RING
finger protein 1
gi|120974081|gb|ABM46633.1| RING1 [Gorilla gorilla]
Length = 377
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L N T CLH FC CI
Sbjct: 19 CPICLDMLKNTMTTKECLHRFCSDCI 44
>gi|296064|emb|CAA78389.1| RING1 [Homo sapiens]
gi|3820982|emb|CAA20235.1| ring finger protein 1 [Homo sapiens]
gi|30583543|gb|AAP36016.1| ring finger protein 1 [Homo sapiens]
gi|60655933|gb|AAX32530.1| ring finger protein 1 [synthetic construct]
gi|60655935|gb|AAX32531.1| ring finger protein 1 [synthetic construct]
gi|119624088|gb|EAX03683.1| ring finger protein 1, isoform CRA_a [Homo sapiens]
gi|119624089|gb|EAX03684.1| ring finger protein 1, isoform CRA_a [Homo sapiens]
gi|123989503|gb|ABM83883.1| ring finger protein 1 [synthetic construct]
gi|123999249|gb|ABM87203.1| ring finger protein 1 [synthetic construct]
Length = 377
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L N T CLH FC CI
Sbjct: 19 CPICLDMLKNTMTTKECLHRFCSDCI 44
>gi|403337819|gb|EJY68133.1| zf-C3HC4 multi-domain protein [Oxytricha trifallax]
Length = 625
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 40 RPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCK 89
+P P C IC+ L + C H +C CIK W++ +E++ LCK
Sbjct: 122 KPPQPKLICNICIEELTDIKAVIDCNHYYCLECIKHWAE--NENTCPLCK 169
>gi|194375029|dbj|BAG62627.1| unnamed protein product [Homo sapiens]
Length = 282
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L N T CLH FC CI
Sbjct: 48 CPICLDMLKNTMTTKECLHRFCSDCI 73
>gi|195568470|ref|XP_002102239.1| GD19604 [Drosophila simulans]
gi|194198166|gb|EDX11742.1| GD19604 [Drosophila simulans]
Length = 2135
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Query: 47 RCPICLLVLNNR--SYTDTCLHEFCFLCIKQWSQ 78
+CPICLL + TC H FC CI WS+
Sbjct: 154 KCPICLLTFRQQEIGTPATCEHIFCAACIDAWSR 187
>gi|432867305|ref|XP_004071127.1| PREDICTED: peroxisome biogenesis factor 10-like [Oryzias latipes]
Length = 320
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 37/80 (46%), Gaps = 18/80 (22%)
Query: 6 FRQTQKRRLELPEIQQASKKQKNDNPSEDDSDGDRPTSPT---SRCPICLLVLNNRSYTD 62
FRQ Q+ R Q K ++ +P DRP SP +RC +CL N + T
Sbjct: 236 FRQRQRAR-------QEWKLFRSLSP-------DRPQSPAPSAARCILCLEARRNSTCTP 281
Query: 63 TCLHEFCFLCIKQWSQISSE 82
C H FC+ CI +W +E
Sbjct: 282 -CGHLFCWECITEWCNTKAE 300
>gi|118375508|ref|XP_001020938.1| hypothetical protein TTHERM_00794190 [Tetrahymena thermophila]
gi|89302705|gb|EAS00693.1| hypothetical protein TTHERM_00794190 [Tetrahymena thermophila
SB210]
Length = 294
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 47 RCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRLLL 97
+CPICL ++ + C +C CI +WS S++ C+ +KQ LLL
Sbjct: 76 QCPICLSIIEDPMSCIQCELNYCGSCISEWSTKKSQNVCPTCRNNKQVLLL 126
>gi|405966171|gb|EKC31483.1| E3 ubiquitin-protein ligase RING2-A [Crassostrea gigas]
Length = 332
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L N T CLH FC CI
Sbjct: 47 CPICLDMLKNTMTTKECLHRFCQDCI 72
>gi|195343701|ref|XP_002038434.1| GM10616 [Drosophila sechellia]
gi|194133455|gb|EDW54971.1| GM10616 [Drosophila sechellia]
Length = 2282
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Query: 47 RCPICLLVLNNR--SYTDTCLHEFCFLCIKQWSQ 78
+CPICLL + TC H FC CI WS+
Sbjct: 154 KCPICLLTFRQQEIGTPATCEHIFCAACIDAWSR 187
>gi|55956948|emb|CAI11435.1| ring finger protein 1 [Canis lupus familiaris]
Length = 377
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L N T CLH FC CI
Sbjct: 19 CPICLDMLKNTMTTKECLHRFCSDCI 44
>gi|405976877|gb|EKC41356.1| E3 ubiquitin-protein ligase RING2-A [Crassostrea gigas]
Length = 332
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L N T CLH FC CI
Sbjct: 47 CPICLDMLKNTMTTKECLHRFCQDCI 72
>gi|348576400|ref|XP_003473975.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cavia
porcellus]
Length = 406
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L N T CLH FC CI
Sbjct: 48 CPICLDMLKNTMTTKECLHRFCSDCI 73
>gi|195336614|ref|XP_002034930.1| GM14421 [Drosophila sechellia]
gi|194128023|gb|EDW50066.1| GM14421 [Drosophila sechellia]
Length = 299
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 6/67 (8%)
Query: 10 QKRRLELPEIQQASKKQKNDNPSEDDSDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFC 69
+ +R +L I+QA KK + S D D P +P +C +CL +N S T C H FC
Sbjct: 213 EHKRQQLESIKQAGKKFLQRSSSAKDLD---PNTP--QCILCLEPRSNNSLT-PCGHIFC 266
Query: 70 FLCIKQW 76
+ C+ +W
Sbjct: 267 WSCLLEW 273
>gi|24644293|ref|NP_649554.1| CG2926, isoform A [Drosophila melanogaster]
gi|7296722|gb|AAF52001.1| CG2926, isoform A [Drosophila melanogaster]
Length = 2296
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Query: 47 RCPICLLVLNNR--SYTDTCLHEFCFLCIKQWSQ 78
+CPICLL + TC H FC CI WS+
Sbjct: 154 KCPICLLTFRQQEIGTPATCEHIFCAACIDAWSR 187
>gi|328872734|gb|EGG21101.1| hypothetical protein DFA_00976 [Dictyostelium fasciculatum]
Length = 281
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRLLL 97
CPICL + N + C H +C CI W I ++ + LCK ++
Sbjct: 40 CPICLSPMTNTTSVVGCQHAYCLECIDNW--IKNKVACPLCKAENDNRII 87
>gi|85084536|ref|XP_957328.1| hypothetical protein NCU06437 [Neurospora crassa OR74A]
gi|28918418|gb|EAA28092.1| hypothetical protein NCU06437 [Neurospora crassa OR74A]
Length = 1167
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 19/36 (52%)
Query: 41 PTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQW 76
P SP CPIC +L CLH FC C+K+W
Sbjct: 57 PLSPQLPCPICTDLLYQPLTLLDCLHTFCGACLKEW 92
>gi|73956929|ref|XP_851172.1| PREDICTED: RING finger protein 166 isoform 2 [Canis lupus
familiaris]
Length = 237
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Query: 22 ASKKQKNDNPSEDDSDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISS 81
AS +Q+ P+ + GD CPICL V + +C H FC C++ Q+ S
Sbjct: 9 ASAQQRQ--PAGGPAGGDSGLEAQYSCPICLEVYHRPVAIGSCGHTFCGECLQPCLQVPS 66
Query: 82 ESSPALCKM 90
P LC++
Sbjct: 67 PLCP-LCRL 74
>gi|30844300|gb|AAP41476.1| immediate early protein ICP0 [Macacine herpesvirus 1]
gi|30844317|gb|AAP41493.1| immediate early protein ICP0 [Macacine herpesvirus 1]
Length = 700
Score = 36.2 bits (82), Expect = 5.0, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 31/74 (41%), Gaps = 4/74 (5%)
Query: 41 PTSPTSRCPICLLVLNNRSYTDT--CLHEFCFLCIKQWSQISSESSPALCKMSKQRLLLF 98
P P C +C ++ +T CLH FC C+K W + +S LC + L++
Sbjct: 73 PAPPRETCAVCTERIDEAQLCNTFPCLHRFCIPCLKTW--LPMRNSCPLCNAAVSYLIVG 130
Query: 99 ASATECLQYINVYD 112
A I V +
Sbjct: 131 VQANGSYSTIPVVN 144
>gi|226501498|ref|NP_001145835.1| uncharacterized protein LOC100279342 [Zea mays]
gi|219884613|gb|ACL52681.1| unknown [Zea mays]
gi|413924382|gb|AFW64314.1| hypothetical protein ZEAMMB73_321715 [Zea mays]
Length = 655
Score = 36.2 bits (82), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 5/44 (11%)
Query: 30 NPSEDDSDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCI 73
P+E++ DR CPIC+ V+ + ++ C H FC++C+
Sbjct: 47 GPAEEEGPADRDL----LCPICMAVIKD-AFLTACGHSFCYMCV 85
>gi|194864878|ref|XP_001971152.1| GG14799 [Drosophila erecta]
gi|190652935|gb|EDV50178.1| GG14799 [Drosophila erecta]
Length = 299
Score = 36.2 bits (82), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 6 FRQTQKRRLELPEIQQASKKQKNDNPSEDDSDGDRPTSPTSRCPICLLVLNNRSYTDTCL 65
+R+ Q+++LE I+QA KK S D D P +P C +CL +N S T C
Sbjct: 211 WREHQRQQLE--SIKQAGKKFLQRGSSVKDVD---PNTPP--CILCLEPRSNSSLT-PCG 262
Query: 66 HEFCFLCIKQW 76
H FC+ C+ +W
Sbjct: 263 HIFCWSCLLEW 273
>gi|397641346|gb|EJK74598.1| hypothetical protein THAOC_03714 [Thalassiosira oceanica]
Length = 636
Score = 35.8 bits (81), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 29/54 (53%), Gaps = 6/54 (11%)
Query: 38 GDRPTSPTSRCPICLLVLNNRSYT--DTCLHEFCFLCIKQWSQISSESSPALCK 89
GD T PTS C ICL + S D C H FCF CI W++ E+S LCK
Sbjct: 297 GDEKT-PTS-CVICLEKPSQESLASIDGCEHLFCFDCIAHWAE--HENSCPLCK 346
>gi|222616200|gb|EEE52332.1| hypothetical protein OsJ_34363 [Oryza sativa Japonica Group]
Length = 490
Score = 35.8 bits (81), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 23/40 (57%)
Query: 47 RCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPA 86
+CPICL ++ CLH FC CI++ ++ ++ PA
Sbjct: 8 QCPICLGIIQKARIITECLHRFCRDCIEKSMRLGNDECPA 47
>gi|110007339|ref|NP_851918.2| ubiquitin E3 ligase ICP0 [Macacine herpesvirus 1]
gi|110007340|ref|NP_851859.2| ubiquitin E3 ligase ICP0 [Macacine herpesvirus 1]
Length = 691
Score = 35.8 bits (81), Expect = 5.2, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 31/74 (41%), Gaps = 4/74 (5%)
Query: 41 PTSPTSRCPICLLVLNNRSYTDT--CLHEFCFLCIKQWSQISSESSPALCKMSKQRLLLF 98
P P C +C ++ +T CLH FC C+K W + +S LC + L++
Sbjct: 73 PAPPRETCAVCTERIDEAQLCNTFPCLHRFCIPCLKTW--LPMRNSCPLCNAAVSYLIVG 130
Query: 99 ASATECLQYINVYD 112
A I V +
Sbjct: 131 VQANGSYSTIPVVN 144
>gi|15241791|ref|NP_198771.1| E3 ubiquitin-protein ligase ORTHRUS 1 [Arabidopsis thaliana]
gi|75333981|sp|Q9FKA7.1|ORTH1_ARATH RecName: Full=E3 ubiquitin-protein ligase ORTHRUS 1; AltName:
Full=Protein VARIANT IN METHYLATION 3
gi|9758330|dbj|BAB08886.1| unnamed protein product [Arabidopsis thaliana]
gi|34365769|gb|AAQ65196.1| At5g39550 [Arabidopsis thaliana]
gi|62319861|dbj|BAD93904.1| zinc finger -like protein [Arabidopsis thaliana]
gi|332007063|gb|AED94446.1| E3 ubiquitin-protein ligase ORTHRUS 1 [Arabidopsis thaliana]
Length = 617
Score = 35.8 bits (81), Expect = 5.2, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Query: 16 LPEIQQASKKQKNDNPSEDDS-DGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIK 74
L E ++A K+QK + DD D + C IC+ L R T C H FC C +
Sbjct: 96 LTEAEKAKKRQKLMSGGGDDGVDEEEKKKLEIFCSICIQ-LPERPITTPCGHNFCLKCFE 154
Query: 75 QWSQISSESSPALCK 89
+W+ + + +C+
Sbjct: 155 KWAVGQGKLTCMICR 169
>gi|195490441|ref|XP_002093141.1| GE21161 [Drosophila yakuba]
gi|194179242|gb|EDW92853.1| GE21161 [Drosophila yakuba]
Length = 299
Score = 35.8 bits (81), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 6/67 (8%)
Query: 10 QKRRLELPEIQQASKKQKNDNPSEDDSDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFC 69
+ +R +L I+QA KK S D D P +P +C +CL +N S T C H FC
Sbjct: 213 EHKRQQLESIKQAGKKFLQRGSSVKDVD---PNTP--QCILCLEPRSNSSLT-PCGHIFC 266
Query: 70 FLCIKQW 76
+ C+ +W
Sbjct: 267 WSCLLEW 273
>gi|67590829|ref|XP_665508.1| KIAA1453 protein [Cryptosporidium hominis TU502]
gi|54656232|gb|EAL35279.1| KIAA1453 protein [Cryptosporidium hominis]
Length = 933
Score = 35.8 bits (81), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 19/26 (73%), Gaps = 2/26 (7%)
Query: 64 CLHEFCFLCIKQWSQISSESSPALCK 89
C H FCF+CIKQWS ++++ LCK
Sbjct: 204 CKHIFCFVCIKQWSDVATQC--PLCK 227
>gi|66356556|ref|XP_625456.1| 2x PHD domain containing protein [Cryptosporidium parvum Iowa II]
gi|46226407|gb|EAK87407.1| 2x PHD domain containing protein [Cryptosporidium parvum Iowa II]
Length = 933
Score = 35.8 bits (81), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 19/26 (73%), Gaps = 2/26 (7%)
Query: 64 CLHEFCFLCIKQWSQISSESSPALCK 89
C H FCF+CIKQWS ++++ LCK
Sbjct: 204 CKHIFCFVCIKQWSDVATQC--PLCK 227
>gi|119482640|ref|XP_001261348.1| peroxisome biosynthesis protein (Peroxin-10), putative [Neosartorya
fischeri NRRL 181]
gi|119409503|gb|EAW19451.1| peroxisome biosynthesis protein (Peroxin-10), putative [Neosartorya
fischeri NRRL 181]
Length = 377
Score = 35.8 bits (81), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 41 PTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQW 76
P+ S+C +CL + + S T TC H FC+ CI+ W
Sbjct: 319 PSGQQSKCTLCLELYKDPSVT-TCGHVFCWTCIRDW 353
>gi|402225461|gb|EJU05522.1| hypothetical protein DACRYDRAFT_113608 [Dacryopinax sp. DJM-731
SS1]
Length = 379
Score = 35.8 bits (81), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 18/31 (58%)
Query: 45 TSRCPICLLVLNNRSYTDTCLHEFCFLCIKQ 75
T RCPIC + N TC H FC LCI++
Sbjct: 34 TLRCPICKDLFNAPVLLATCGHSFCSLCIRE 64
>gi|330798063|ref|XP_003287075.1| hypothetical protein DICPUDRAFT_151139 [Dictyostelium purpureum]
gi|325082911|gb|EGC36378.1| hypothetical protein DICPUDRAFT_151139 [Dictyostelium purpureum]
Length = 584
Score = 35.8 bits (81), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 3/43 (6%)
Query: 48 CPICLLVLNNRSYTD-TCLHEFCFLCIKQWSQISSESSPALCK 89
C IC + LN+ + T C H+FC+ CI +WS++ E + LC+
Sbjct: 438 CCICYIKLNSSNTTSIDCSHKFCYGCISEWSKL--EETCPLCR 478
>gi|195163433|ref|XP_002022554.1| GL12903 [Drosophila persimilis]
gi|194104546|gb|EDW26589.1| GL12903 [Drosophila persimilis]
Length = 221
Score = 35.8 bits (81), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Query: 24 KKQKNDNPSEDDSDGDRPTSPTS-RCPICLLVLNNRSYTDTCLHEFCFLCIKQ 75
DN S D S PT ++ C ICL + NN T TC H FC+ C+ Q
Sbjct: 51 NAMAEDNASADRSGDVEPTDGSAFACNICLHIANNAVVT-TCGHLFCWPCLHQ 102
>gi|51971753|dbj|BAD44541.1| zinc finger-like protein [Arabidopsis thaliana]
Length = 617
Score = 35.8 bits (81), Expect = 5.5, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Query: 16 LPEIQQASKKQKNDNPSEDDS-DGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIK 74
L E ++A K+QK + DD D + C IC+ L R T C H FC C +
Sbjct: 96 LTEAEKAKKRQKLMSGGGDDGVDEEEKKKLEIFCSICIQ-LPERPITTPCGHNFCLKCFE 154
Query: 75 QWSQISSESSPALCK 89
+W+ + + +C+
Sbjct: 155 KWAVGQGKLTCMICR 169
>gi|146089201|ref|XP_001466270.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|398016764|ref|XP_003861570.1| hypothetical protein, conserved [Leishmania donovani]
gi|134070372|emb|CAM68710.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|322499796|emb|CBZ34870.1| hypothetical protein, conserved [Leishmania donovani]
Length = 296
Score = 35.8 bits (81), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 11/66 (16%)
Query: 32 SEDDSDGDRPTSPTSRCPICLLVLNNRS--YTDTCLHEFCFLCIKQWSQISSESSPALCK 89
S++D++ RP C+L L+NR C H FC+ CI +W I S A+C
Sbjct: 209 SDEDAEDARPGK-------CMLCLSNRKCPTATNCGHIFCWRCIAEW--IQSNPQEAVCP 259
Query: 90 MSKQRL 95
+Q +
Sbjct: 260 FCRQHI 265
>gi|390348740|ref|XP_792718.3| PREDICTED: E3 ubiquitin-protein ligase RING2-A-like
[Strongylocentrotus purpuratus]
Length = 269
Score = 35.8 bits (81), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L N T CLH FC CI
Sbjct: 50 CPICLDMLKNTYTTKECLHRFCQDCI 75
>gi|40215869|gb|AAR82791.1| LD09942p [Drosophila melanogaster]
gi|51092193|gb|AAT94510.1| LD08594p [Drosophila melanogaster]
Length = 1489
Score = 35.8 bits (81), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Query: 47 RCPICLLVLNNR--SYTDTCLHEFCFLCIKQWSQ 78
+CPICLL + TC H FC CI WS+
Sbjct: 154 KCPICLLTFRQQEIGTPATCEHIFCAACIDAWSR 187
>gi|70987208|ref|XP_749083.1| peroxisome biosynthesis protein (Peroxin-10) [Aspergillus fumigatus
Af293]
gi|66846713|gb|EAL87045.1| peroxisome biosynthesis protein (Peroxin-10), putative [Aspergillus
fumigatus Af293]
Length = 377
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 41 PTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQW 76
P+ S+C +CL + + S T TC H FC+ CI+ W
Sbjct: 319 PSGQQSKCTLCLELYKDPSVT-TCGHVFCWTCIRDW 353
>gi|344267850|ref|XP_003405778.1| PREDICTED: protein SCAF11 [Loxodonta africana]
Length = 1469
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Query: 43 SPTSRCPICL--LVLNNRSYTDTCLHEFCFLCIKQWSQI 79
S RCPICL L+ + + C H FC CI +W++
Sbjct: 36 SEADRCPICLNCLLEKEVGFPENCNHIFCMTCILKWAET 74
>gi|440909609|gb|ELR59498.1| hypothetical protein M91_02566, partial [Bos grunniens mutus]
Length = 379
Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L N T CLH FC CI
Sbjct: 72 CPICLDMLKNTMTTKECLHRFCSDCI 97
>gi|260789153|ref|XP_002589612.1| hypothetical protein BRAFLDRAFT_122927 [Branchiostoma floridae]
gi|229274792|gb|EEN45623.1| hypothetical protein BRAFLDRAFT_122927 [Branchiostoma floridae]
Length = 350
Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L N T CLH FC CI
Sbjct: 53 CPICLDMLKNTMTTKECLHRFCQDCI 78
>gi|389601557|ref|XP_001565691.2| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|322505092|emb|CAM39187.2| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 466
Score = 35.8 bits (81), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Query: 25 KQKNDNPSEDDSDGDRPTSPTSRCPICLLVLNNRSYTDT-CLHEFCFLCIKQWSQISSES 83
K+ + + SD D + T +C +C N R T T C H FC+ CI +W I S
Sbjct: 362 KRSTEAAATASSDEDAEDARTGKCMLCFS--NRRCPTATNCGHIFCWRCIAEW--IQSNP 417
Query: 84 SPALCKMSKQRL 95
A+C +Q +
Sbjct: 418 QEAVCPFCRQHI 429
>gi|281200650|gb|EFA74868.1| hypothetical protein PPL_11902 [Polysphondylium pallidum PN500]
Length = 415
Score = 35.8 bits (81), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Query: 47 RCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCK 89
+C IC+ + D C H FCF CI +WS+ + +S LCK
Sbjct: 36 QCIICVDKYTAEAKIDGCEHTFCFDCIHEWSKQT--NSCPLCK 76
>gi|159123146|gb|EDP48266.1| peroxisome biosynthesis protein (Peroxin-10), putative [Aspergillus
fumigatus A1163]
Length = 377
Score = 35.8 bits (81), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 41 PTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQW 76
P+ S+C +CL + + S T TC H FC+ CI+ W
Sbjct: 319 PSGQQSKCTLCLELYKDPSVT-TCGHVFCWTCIRDW 353
>gi|442617590|ref|NP_001262289.1| CG2926, isoform B [Drosophila melanogaster]
gi|440217099|gb|AGB95672.1| CG2926, isoform B [Drosophila melanogaster]
Length = 874
Score = 35.8 bits (81), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Query: 47 RCPICLLVLNNR--SYTDTCLHEFCFLCIKQWSQ 78
+CPICLL + TC H FC CI WS+
Sbjct: 154 KCPICLLTFRQQEIGTPATCEHIFCAACIDAWSR 187
>gi|326508004|dbj|BAJ86745.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 292
Score = 35.8 bits (81), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 35/92 (38%), Gaps = 2/92 (2%)
Query: 38 GDRPTSPTSRCPICL--LVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRL 95
GDR C ICL + L + C H +C CI +W+ CK + L
Sbjct: 46 GDRAAGGCGVCAICLDKIPLQETALVKGCDHAYCVTCILRWASYKQTPVCPQCKHPFEFL 105
Query: 96 LLFASATECLQYINVYDIMILQVNTSTFKGLF 127
+ S CL + + L + + FK L
Sbjct: 106 SVHRSLDGCLHGYMFDESVCLLLRATWFKPLV 137
>gi|195396284|ref|XP_002056762.1| GJ11111 [Drosophila virilis]
gi|194143471|gb|EDW59874.1| GJ11111 [Drosophila virilis]
Length = 2347
Score = 35.8 bits (81), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Query: 47 RCPICLLVLNNRSYTD--TCLHEFCFLCIKQWSQ 78
+CPICLL + TC H FC CI+ W++
Sbjct: 200 KCPICLLTFRQQEIGRPITCEHMFCAACIEAWAK 233
>gi|255079170|ref|XP_002503165.1| predicted protein [Micromonas sp. RCC299]
gi|226518431|gb|ACO64423.1| predicted protein [Micromonas sp. RCC299]
Length = 524
Score = 35.8 bits (81), Expect = 6.1, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 36 SDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKM 90
S P+ RCP+CL +L + C H FCF C + + +SS C+M
Sbjct: 2 SQASAPSIDDWRCPVCLEMLC-KPVVGACGHVFCFWCEHKSMDVFDKSSCPTCRM 55
>gi|324512529|gb|ADY45189.1| TRAF-interacting protein [Ascaris suum]
Length = 443
Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Query: 42 TSPTSRCPICL-LVLNNRSYTDTCLHEFCFLCIKQWSQIS 80
S SRCPICL L + R C H F CI QW Q S
Sbjct: 2 ASDDSRCPICLSLFITGRISALLCGHTFHLECILQWLQTS 41
>gi|295148228|ref|NP_001171208.1| RING finger protein 170 [Gallus gallus]
gi|293631999|gb|ADE59480.1| RNF170 protein [Gallus gallus]
Length = 256
Score = 35.8 bits (81), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 46/106 (43%), Gaps = 11/106 (10%)
Query: 17 PEIQQASKKQKNDNPSEDD-SDGDRPTSPTSR-CPICLLVLNNRSYTDTCLHEFCFLCIK 74
PE Q+ + + +E D S GDR T CP+CL T+ C H FC CI
Sbjct: 54 PENQELVRALRQQLQTEQDASTGDRHRFYTDMSCPVCLQQATFPIETN-CGHLFCGSCII 112
Query: 75 QWSQISSESSPALCKMSKQRLLLFA--------SATECLQYINVYD 112
+ + S C + +Q + LF AT+ LQ +N Y+
Sbjct: 113 AYWRYGSWLGAIRCPICRQTVTLFLPLFSEDQQGATQVLQDVNDYN 158
>gi|392571351|gb|EIW64523.1| RING/U-box, partial [Trametes versicolor FP-101664 SS1]
Length = 236
Score = 35.8 bits (81), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSP 85
CPIC+ VL T+ C H C C+ QW S + P
Sbjct: 112 CPICMEVLATTYITNPCGHSCCGDCLLQWIDTSRKPGP 149
>gi|413932705|gb|AFW67256.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 301
Score = 35.8 bits (81), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 34/78 (43%), Gaps = 19/78 (24%)
Query: 48 CPICLLVLNNRSYTDTCLH-----------EFCFLCIKQWSQI--SSESSPALCKMSKQR 94
CPICL + +Y DTC FC+ CI QW +I S + P +S R
Sbjct: 37 CPICLEAFKDEAYLDTCFRSFLKLLAASADSFCYRCICQWVRIVASKHAEP----LSSVR 92
Query: 95 LLLFASATECLQYINVYD 112
L TE L I+ +D
Sbjct: 93 CPL--CKTENLSVIHAFD 108
>gi|330804219|ref|XP_003290095.1| hypothetical protein DICPUDRAFT_80842 [Dictyostelium purpureum]
gi|325079804|gb|EGC33387.1| hypothetical protein DICPUDRAFT_80842 [Dictyostelium purpureum]
Length = 543
Score = 35.8 bits (81), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Query: 46 SRCPICLLVLNNRSYTD-TCLHEFCFLCIKQWSQISSESSPALCK 89
S C IC + L++ + T C H+FC+ CI +WS++ E + LC+
Sbjct: 401 SECCICYIKLDSNNTTSIDCSHKFCYGCISEWSKL--EETCPLCR 443
>gi|145247945|ref|XP_001396221.1| peroxisome biosynthesis protein (Peroxin-10) [Aspergillus niger CBS
513.88]
gi|134080968|emb|CAK41482.1| unnamed protein product [Aspergillus niger]
gi|350638929|gb|EHA27284.1| hypothetical protein ASPNIDRAFT_50837 [Aspergillus niger ATCC 1015]
Length = 378
Score = 35.8 bits (81), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 6/57 (10%)
Query: 41 PTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRLLL 97
P +C +CL + + S T TC H FC+ C++ W + E C + +Q +LL
Sbjct: 320 PEGQQRKCTLCLELFKDPSVT-TCGHVFCWTCVRDWVREKPE-----CPLCRQEVLL 370
>gi|71059767|emb|CAJ18427.1| Ring1 [Mus musculus]
Length = 377
Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 15/26 (57%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL VL N T CLH C CI
Sbjct: 19 CPICLDVLKNTMTTKECLHRLCSDCI 44
>gi|198476442|ref|XP_002132359.1| GA25235 [Drosophila pseudoobscura pseudoobscura]
gi|198137696|gb|EDY69761.1| GA25235 [Drosophila pseudoobscura pseudoobscura]
Length = 177
Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Query: 34 DDSDGDRPTSPTSRCPICLLVLNNRSYTDT-CLHEFCFLCIKQWSQISSESSPALCKMSK 92
D D S CPIC L+N T C H FCF C++ +ISS LCK S
Sbjct: 18 DSGDEAEECSNAVLCPICFEHLHNEGPVATICGHLFCFKCLRNSVKISSAC--PLCKKSD 75
Query: 93 QRLLL 97
+R L
Sbjct: 76 KRAGL 80
>gi|195116881|ref|XP_002002980.1| GI17673 [Drosophila mojavensis]
gi|193913555|gb|EDW12422.1| GI17673 [Drosophila mojavensis]
Length = 334
Score = 35.8 bits (81), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 18/31 (58%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCIKQWSQ 78
CPIC VL + +C H FC CI++W Q
Sbjct: 18 CPICADVLEEPMQSSSCEHAFCRFCIEKWIQ 48
>gi|291400540|ref|XP_002716859.1| PREDICTED: deltex 3-like [Oryctolagus cuniculus]
Length = 738
Score = 35.8 bits (81), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 31/73 (42%), Gaps = 19/73 (26%)
Query: 22 ASKKQKNDN--PSEDDSDGDRPTSPTSR-----------------CPICLLVLNNRSYTD 62
A +K D+ P E DS+G P SP S+ C IC+ + ++
Sbjct: 507 AGEKSNEDHEAPMEIDSNGSEPASPLSKDSVGPGASGLDEKEKEICIICMDAITDKRVLP 566
Query: 63 TCLHEFCFLCIKQ 75
C HEFC CI +
Sbjct: 567 QCKHEFCSPCISK 579
>gi|224000760|ref|XP_002290052.1| hypothetical protein THAPSDRAFT_268817 [Thalassiosira pseudonana
CCMP1335]
gi|220973474|gb|EED91804.1| hypothetical protein THAPSDRAFT_268817 [Thalassiosira pseudonana
CCMP1335]
Length = 331
Score = 35.8 bits (81), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 24/48 (50%)
Query: 43 SPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKM 90
SP CP+CL + CLH FC CI++ ++S + C++
Sbjct: 94 SPEFHCPVCLSYIKQTRIVKECLHRFCNECIQKCLRVSPKKECPQCRV 141
>gi|193848531|gb|ACF22720.1| PHD finger family [Brachypodium distachyon]
Length = 748
Score = 35.8 bits (81), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Query: 48 CPICLLVLNN--RSYTDTCLHEFCFLCIKQWSQISS 81
C ICL R D C H FCF+CI W+++ S
Sbjct: 35 CGICLTDSRRAIRGELDCCAHHFCFVCIMAWARVES 70
>gi|170592098|ref|XP_001900806.1| Topors protein [Brugia malayi]
gi|158591673|gb|EDP30277.1| Topors protein, putative [Brugia malayi]
Length = 597
Score = 35.8 bits (81), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 8/70 (11%)
Query: 25 KQKNDNPSEDDSDGDRPTSPTSRCPICLLV-LNNRSYTDTCLHEFCFLCIKQWSQISSES 83
+ +N +PS G +S +C ICL + + + + D C H++C+ CI +W ++
Sbjct: 5 RXRNSDPSVSQQKG--TSSSGDKCSICLGIPIFDEASLDGCSHKYCYPCITEWIKLR--- 59
Query: 84 SPALCKMSKQ 93
+C M K+
Sbjct: 60 --PICPMCKR 67
>gi|426243452|ref|XP_004015569.1| PREDICTED: RING finger protein 166 [Ovis aries]
Length = 314
Score = 35.4 bits (80), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Query: 19 IQQASKKQKNDNPSEDDSDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQ 78
+ A ++Q P+ DS + S CPICL V + +C H FC C++ Q
Sbjct: 8 VGSAQQRQPPGGPAGGDSALEAQYS----CPICLEVYHRPVAIGSCGHTFCGECLQPCLQ 63
Query: 79 ISSESSPALCKM 90
+ S P LC++
Sbjct: 64 VPSPLCP-LCRL 74
>gi|358373051|dbj|GAA89651.1| peroxisome biosynthesis protein (Peroxin-10) [Aspergillus kawachii
IFO 4308]
Length = 378
Score = 35.4 bits (80), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 6/57 (10%)
Query: 41 PTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRLLL 97
P +C +CL + + S T TC H FC+ C++ W + E C + +Q +LL
Sbjct: 320 PEGQQRKCTLCLELFKDPSVT-TCGHVFCWTCVRDWVREKPE-----CPLCRQEVLL 370
>gi|390335932|ref|XP_788976.3| PREDICTED: E3 ubiquitin-protein ligase RING2-A-like
[Strongylocentrotus purpuratus]
Length = 303
Score = 35.4 bits (80), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L N T CLH FC CI
Sbjct: 47 CPICLDMLKNTYTTKECLHRFCQDCI 72
>gi|344292784|ref|XP_003418105.1| PREDICTED: RING finger protein 166-like isoform 1 [Loxodonta
africana]
Length = 237
Score = 35.4 bits (80), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Query: 22 ASKKQKNDNPSEDDSDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISS 81
AS +Q+ P + GD CPICL V + +C H FC C++ Q+ S
Sbjct: 9 ASAQQRQ--PPAGPAGGDSGLEAQYSCPICLEVYHRPVAIGSCGHTFCGECLQPCLQVPS 66
Query: 82 ESSPALCKM 90
P LC++
Sbjct: 67 PLCP-LCRL 74
>gi|146163961|ref|XP_001012744.2| hypothetical protein TTHERM_00086960 [Tetrahymena thermophila]
gi|146145853|gb|EAR92499.2| hypothetical protein TTHERM_00086960 [Tetrahymena thermophila
SB210]
Length = 536
Score = 35.4 bits (80), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 24/53 (45%)
Query: 47 RCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRLLLFA 99
+CPIC+ ++ + C FC CI+QW E C+ Q L++
Sbjct: 56 KCPICINIIEDPKTCINCEANFCAQCIQQWVSHQGEKQCPCCRDQGQERFLYS 108
>gi|357124532|ref|XP_003563953.1| PREDICTED: uncharacterized protein LOC100828773 [Brachypodium
distachyon]
Length = 726
Score = 35.4 bits (80), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Query: 48 CPICLLVLNN--RSYTDTCLHEFCFLCIKQWSQISS 81
C ICL R D C H FCF+CI W+++ S
Sbjct: 35 CGICLTDSRRAIRGELDCCAHHFCFVCIMAWARVES 70
>gi|195116879|ref|XP_002002979.1| GI10082 [Drosophila mojavensis]
gi|193913554|gb|EDW12421.1| GI10082 [Drosophila mojavensis]
Length = 334
Score = 35.4 bits (80), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 18/31 (58%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCIKQWSQ 78
CPIC VL + +C H FC CI++W Q
Sbjct: 18 CPICADVLEEPMQSSSCEHAFCRFCIEKWMQ 48
>gi|195049005|ref|XP_001992634.1| GH24860 [Drosophila grimshawi]
gi|193893475|gb|EDV92341.1| GH24860 [Drosophila grimshawi]
Length = 480
Score = 35.4 bits (80), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Query: 28 NDNPSEDDSDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSP 85
+D E D D D P S C IC+ LN T +C H FC C+ W Q ++ P
Sbjct: 90 SDTSGEHDGDTDYPDS-RYECAICIDWLNEPVVT-SCGHRFCKSCLSDWLQNHNQCCP 145
>gi|340369220|ref|XP_003383146.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
[Amphimedon queenslandica]
Length = 150
Score = 35.4 bits (80), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 45 TSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRL 95
T +CPICL L N T CLH+FC CI+ ++ ++ C + K+++
Sbjct: 30 TLQCPICLEQLKNPCLTQ-CLHQFCRECIQTVISTTTAANKPKCPLCKEQI 79
>gi|444519152|gb|ELV12614.1| Ras association domain-containing protein 7 [Tupaia chinensis]
Length = 719
Score = 35.4 bits (80), Expect = 7.2, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Query: 48 CPICLLVLNNRSY--TDTCLHEFCFLCIKQWSQISSESS 84
CPICL +++ + C H FC CI +WS+I E++
Sbjct: 457 CPICLNTFRDQAVGTPEDCAHYFCLDCIVEWSKIPVENA 495
>gi|443894656|dbj|GAC72003.1| FOG: Predicted E3 ubiquitin ligase [Pseudozyma antarctica T-34]
Length = 314
Score = 35.4 bits (80), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 10/65 (15%)
Query: 17 PEIQQASKKQKN-DNPSEDDSDGDRPTSPTSRCPICLLVLNNRSYTDTCLH-EFCFLCIK 74
P+ + +K N + S DDS G C IC + +R+ CLH +FCFLC
Sbjct: 9 PDTAKGKRKASNASDTSTDDSSG--------WCLICHSDVVDRAVLPRCLHSQFCFLCFT 60
Query: 75 QWSQI 79
+W I
Sbjct: 61 RWCAI 65
>gi|242007226|ref|XP_002424443.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212507843|gb|EEB11705.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 411
Score = 35.4 bits (80), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRLLLF 98
CPICL L T +C H FC C+ W + ES P + ++L LF
Sbjct: 19 CPICLSCLKEPVLT-SCGHRFCSSCLNLWLESKGESCPVDGGILNKKLDLF 68
>gi|417397633|gb|JAA45850.1| Putative ring finger protein [Desmodus rotundus]
Length = 237
Score = 35.4 bits (80), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Query: 19 IQQASKKQKNDNPSEDDSDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQ 78
+ A ++Q P+ DS + S CPICL V + +C H FC C++ Q
Sbjct: 8 VASAQQRQPPGGPAGGDSGLEAQYS----CPICLEVYHRPVAIGSCGHTFCGECLQPCLQ 63
Query: 79 ISSESSPALCKM 90
+ S P LC++
Sbjct: 64 VPSPLCP-LCRL 74
>gi|194770896|ref|XP_001967519.1| GF20765 [Drosophila ananassae]
gi|190618529|gb|EDV34053.1| GF20765 [Drosophila ananassae]
Length = 2224
Score = 35.4 bits (80), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Query: 47 RCPICLLVLNNR--SYTDTCLHEFCFLCIKQWSQ 78
+CPICL + TC H FC CI+ WS+
Sbjct: 162 KCPICLFTFRQQEIGTPATCEHVFCAACIEAWSR 195
>gi|297284657|ref|XP_001099780.2| PREDICTED: RING finger protein 166-like [Macaca mulatta]
Length = 256
Score = 35.4 bits (80), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Query: 22 ASKKQKNDNPSEDDSDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISS 81
AS +Q+ P + GD CPICL V + +C H FC C++ Q+ S
Sbjct: 9 ASAQQRQ--PPAGPAGGDSGLEAQYTCPICLEVYHRPVAIGSCGHTFCGECLQPCLQVPS 66
Query: 82 ESSPALCKM 90
P LC++
Sbjct: 67 PLCP-LCRL 74
>gi|255581342|ref|XP_002531481.1| ubiquitin-protein ligase, putative [Ricinus communis]
gi|223528908|gb|EEF30905.1| ubiquitin-protein ligase, putative [Ricinus communis]
Length = 460
Score = 35.4 bits (80), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Query: 17 PEIQQASKKQKNDNPSEDDSDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQW 76
P IQ + K ND+ S+ + PTS C IC ++ C H FC+ CI+ W
Sbjct: 282 PAIQNLAGK--NDDVSQSECISGLPTSVELSCVICWTDFSSIRGVLPCGHRFCYSCIQNW 339
Query: 77 SQ 78
+
Sbjct: 340 AD 341
>gi|432882395|ref|XP_004074009.1| PREDICTED: E3 ubiquitin-protein ligase RNF19A-like, partial
[Oryzias latipes]
Length = 680
Score = 35.4 bits (80), Expect = 7.5, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 13/71 (18%)
Query: 48 CPICLLVLNNRSYTD--TCLHEFCFLCIKQWSQISSESSPALCKMSKQRLLLFASATECL 105
CP+CLL L + D TC H C C++Q+ +I ++S+ R+ + S EC
Sbjct: 19 CPLCLLRLPRERFPDIMTCHHRSCADCLRQYLRI---------EISESRVNI--SCPECS 67
Query: 106 QYINVYDIMIL 116
+ N +DI ++
Sbjct: 68 ERFNPHDIQMI 78
>gi|443720364|gb|ELU10162.1| hypothetical protein CAPTEDRAFT_167590 [Capitella teleta]
Length = 502
Score = 35.4 bits (80), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 26/57 (45%), Gaps = 6/57 (10%)
Query: 20 QQASKKQKNDNPSEDDSDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQW 76
Q +S Q D P ED R CPICLLV N T +C H +C CI W
Sbjct: 13 QNSSIDQGFDLPWEDGRVDKR-----YECPICLLVQRNPVQT-SCGHRYCRACIYAW 63
>gi|30520320|ref|NP_849163.1| RING finger protein 166 isoform 1 [Homo sapiens]
gi|114664095|ref|XP_523462.2| PREDICTED: uncharacterized protein LOC468071 [Pan troglodytes]
gi|402909292|ref|XP_003917356.1| PREDICTED: RING finger protein 166 [Papio anubis]
gi|426383204|ref|XP_004058177.1| PREDICTED: RING finger protein 166 [Gorilla gorilla gorilla]
gi|74762644|sp|Q96A37.1|RN166_HUMAN RecName: Full=RING finger protein 166
gi|15530305|gb|AAH13948.1| Ring finger protein 166 [Homo sapiens]
gi|16878026|gb|AAH17226.1| Ring finger protein 166 [Homo sapiens]
gi|119587185|gb|EAW66781.1| ring finger protein 166, isoform CRA_a [Homo sapiens]
gi|119587189|gb|EAW66785.1| ring finger protein 166, isoform CRA_a [Homo sapiens]
gi|313882568|gb|ADR82770.1| ring finger protein 166 [synthetic construct]
gi|410221656|gb|JAA08047.1| ring finger protein 166 [Pan troglodytes]
gi|410251382|gb|JAA13658.1| ring finger protein 166 [Pan troglodytes]
gi|410288374|gb|JAA22787.1| ring finger protein 166 [Pan troglodytes]
gi|410330391|gb|JAA34142.1| ring finger protein 166 [Pan troglodytes]
Length = 237
Score = 35.4 bits (80), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Query: 22 ASKKQKNDNPSEDDSDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISS 81
AS +Q+ P + GD CPICL V + +C H FC C++ Q+ S
Sbjct: 9 ASAQQRQ--PPAGPAGGDSGLEAQYTCPICLEVYHRPVAIGSCGHTFCGECLQPCLQVPS 66
Query: 82 ESSPALCKM 90
P LC++
Sbjct: 67 PLCP-LCRL 74
>gi|342320725|gb|EGU12664.1| Hypothetical Protein RTG_01214 [Rhodotorula glutinis ATCC 204091]
Length = 946
Score = 35.4 bits (80), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 11/81 (13%)
Query: 11 KRRLELPEIQQASKKQKNDNPSEDDSDGDRPTSPTSR----------CPICLLVLNNRSY 60
+RR L +++ + D SDG+R P C ICL + NR+
Sbjct: 40 RRRNPLEGFDDEAEEADDGRDRRDLSDGERGDEPEDDQGEGEDEEELCAICLSPIENRTV 99
Query: 61 TDTCLH-EFCFLCIKQWSQIS 80
C H +FC+ CI+ W+ S
Sbjct: 100 IFPCHHGQFCWQCIRAWTDQS 120
>gi|156356145|ref|XP_001623790.1| predicted protein [Nematostella vectensis]
gi|156210521|gb|EDO31690.1| predicted protein [Nematostella vectensis]
Length = 399
Score = 35.4 bits (80), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Query: 39 DRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQW 76
+ P SP C ICL+V+N T C H FC C +W
Sbjct: 18 ETPPSPELMCGICLMVVNKPVLT-YCGHSFCNFCFNKW 54
>gi|324500030|gb|ADY40028.1| E3 ubiquitin-protein ligase RBBP6 [Ascaris suum]
Length = 1136
Score = 35.4 bits (80), Expect = 7.7, Method: Composition-based stats.
Identities = 16/63 (25%), Positives = 29/63 (46%)
Query: 13 RLELPEIQQASKKQKNDNPSEDDSDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLC 72
+ +P + +++QK S +R P +CP+C +L + T C FC C
Sbjct: 202 KFVVPIMHWKARQQKKTELSRAPEPDNRVIPPELKCPLCAQLLRDAVLTTCCGDSFCAEC 261
Query: 73 IKQ 75
++Q
Sbjct: 262 VQQ 264
>gi|294875374|ref|XP_002767291.1| hypothetical protein Pmar_PMAR024486 [Perkinsus marinus ATCC 50983]
gi|239868854|gb|EER00009.1| hypothetical protein Pmar_PMAR024486 [Perkinsus marinus ATCC 50983]
Length = 844
Score = 35.4 bits (80), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 28/62 (45%)
Query: 17 PEIQQASKKQKNDNPSEDDSDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQW 76
P Q S +++ + S + G+ + RC IC ++ CLH FC C+ QW
Sbjct: 434 PTTPQLSGQKRRRDSSSSELPGEEEIAEELRCAICQDLMYRPVMVLDCLHNFCSSCLSQW 493
Query: 77 SQ 78
Q
Sbjct: 494 LQ 495
>gi|269860353|ref|XP_002649898.1| superfamily II DNA/RNA helicase, sNF2 family [Enterocytozoon
bieneusi H348]
gi|220066658|gb|EED44132.1| superfamily II DNA/RNA helicase, sNF2 family [Enterocytozoon
bieneusi H348]
Length = 309
Score = 35.4 bits (80), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 32 SEDDSDGDRPTSPTSRCPICL--LVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCK 89
S+DD+ S+C IC L+ R +T+TC H F CIK W +++ CK
Sbjct: 203 SKDDNIAASMEEDYSKCMICCENLINKKRIFTNTCGHSFHMECIKGWVLLANNFFCIYCK 262
>gi|417399023|gb|JAA46544.1| Putative ring finger protein [Desmodus rotundus]
Length = 328
Score = 35.4 bits (80), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Query: 19 IQQASKKQKNDNPSEDDSDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQ 78
+ A ++Q P+ DS + S CPICL V + +C H FC C++ Q
Sbjct: 8 VASAQQRQPPGGPAGGDSGLEAQYS----CPICLEVYHRPVAIGSCGHTFCGECLQPCLQ 63
Query: 79 ISSESSPALCKM 90
+ S P LC++
Sbjct: 64 VPSPLCP-LCRL 74
>gi|383409953|gb|AFH28190.1| RING finger protein 166 isoform 1 [Macaca mulatta]
gi|384939584|gb|AFI33397.1| RING finger protein 166 isoform 1 [Macaca mulatta]
Length = 237
Score = 35.4 bits (80), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Query: 22 ASKKQKNDNPSEDDSDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISS 81
AS +Q+ P + GD CPICL V + +C H FC C++ Q+ S
Sbjct: 9 ASAQQRQ--PPAGPAGGDSGLEAQYTCPICLEVYHRPVAIGSCGHTFCGECLQPCLQVPS 66
Query: 82 ESSPALCKM 90
P LC++
Sbjct: 67 PLCP-LCRL 74
>gi|417398516|gb|JAA46291.1| Putative ring finger protein [Desmodus rotundus]
Length = 295
Score = 35.4 bits (80), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Query: 19 IQQASKKQKNDNPSEDDSDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQ 78
+ A ++Q P+ DS + S CPICL V + +C H FC C++ Q
Sbjct: 8 VASAQQRQPPGGPAGGDSGLEAQYS----CPICLEVYHRPVAIGSCGHTFCGECLQPCLQ 63
Query: 79 ISSESSPALCKM 90
+ S P LC++
Sbjct: 64 VPSPLCP-LCRL 74
>gi|195398502|ref|XP_002057860.1| GJ17869 [Drosophila virilis]
gi|194141514|gb|EDW57933.1| GJ17869 [Drosophila virilis]
Length = 334
Score = 35.4 bits (80), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 18/31 (58%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCIKQWSQ 78
CPIC VL + +C H FC CI++W Q
Sbjct: 18 CPICADVLEEPMQSSSCEHAFCRFCIEKWIQ 48
>gi|170033120|ref|XP_001844427.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167873541|gb|EDS36924.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 298
Score = 35.4 bits (80), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 10/77 (12%)
Query: 23 SKKQKNDNPSED---DSDGDRPTSPTSRCPICL-LVLNNRSYTDTCLHEFCFLCIKQWSQ 78
+K+ K+ P D SDG P + CPIC + ++ + C H FCF CIKQ Q
Sbjct: 217 AKRPKSSEPELDLSQSSDGGAPAR-SVVCPICYDSIFKKQASSTVCGHLFCFACIKQEIQ 275
Query: 79 ISSESSPALCKMSKQRL 95
+ + C + K++L
Sbjct: 276 LRQK-----CPLCKRKL 287
>gi|351695837|gb|EHA98755.1| E3 ubiquitin-protein ligase RNF19A [Heterocephalus glaber]
Length = 834
Score = 35.4 bits (80), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 13/71 (18%)
Query: 48 CPICLLVLNNRSYTD--TCLHEFCFLCIKQWSQISSESSPALCKMSKQRLLLFASATECL 105
CP+CLL + + D TC H C C++Q+ +I ++S+ R+ + S EC
Sbjct: 132 CPLCLLRHSKDRFPDIMTCHHRSCVDCLRQYLRI---------EISESRVNI--SCPECT 180
Query: 106 QYINVYDIMIL 116
+ N YDI ++
Sbjct: 181 ERFNPYDIRLI 191
>gi|357116408|ref|XP_003559973.1| PREDICTED: peroxisome biogenesis factor 10-like [Brachypodium
distachyon]
Length = 362
Score = 35.4 bits (80), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 34 DDSDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQW 76
D + G S S+C +CL N + T TC H FC+ CI +W
Sbjct: 294 DLASGSEAPSSKSKCTLCLSTRQNPTAT-TCGHVFCWNCIMEW 335
>gi|302781859|ref|XP_002972703.1| hypothetical protein SELMODRAFT_413245 [Selaginella moellendorffii]
gi|300159304|gb|EFJ25924.1| hypothetical protein SELMODRAFT_413245 [Selaginella moellendorffii]
Length = 412
Score = 35.4 bits (80), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Query: 48 CPICLLVLNNRSYTD--TCLHEFCFLCIKQWSQISSESSPALCK 89
CPICL + C+H FC CI++WS++ S LCK
Sbjct: 90 CPICLGAIEESKNASLWWCMHSFCVGCIEEWSKV--RRSCPLCK 131
>gi|302812813|ref|XP_002988093.1| hypothetical protein SELMODRAFT_447184 [Selaginella moellendorffii]
gi|300144199|gb|EFJ10885.1| hypothetical protein SELMODRAFT_447184 [Selaginella moellendorffii]
Length = 412
Score = 35.4 bits (80), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Query: 48 CPICLLVLNNRSYTD--TCLHEFCFLCIKQWSQISSESSPALCK 89
CPICL + C+H FC CI++WS++ S LCK
Sbjct: 90 CPICLGAIEESKNASLWWCMHSFCVGCIEEWSKV--RRSCPLCK 131
>gi|449434332|ref|XP_004134950.1| PREDICTED: putative E3 ubiquitin-protein ligase RING1a-like
[Cucumis sativus]
gi|449479584|ref|XP_004155643.1| PREDICTED: putative E3 ubiquitin-protein ligase RING1a-like
[Cucumis sativus]
Length = 427
Score = 35.4 bits (80), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPA 86
CPICL ++ CLH FC CI + ++ ++ PA
Sbjct: 65 CPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNKECPA 103
>gi|449265905|gb|EMC77034.1| RING finger protein 170 [Columba livia]
Length = 268
Score = 35.4 bits (80), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 46/106 (43%), Gaps = 11/106 (10%)
Query: 17 PEIQQASKKQKNDNPSEDD-SDGDRPTSPTSR-CPICLLVLNNRSYTDTCLHEFCFLCIK 74
PE Q+ + + +E D S GDR T CP+CL T+ C H FC CI
Sbjct: 66 PENQELVRALRQQLQTEQDASAGDRHRFYTDMSCPVCLQQATFPIETN-CGHLFCGSCII 124
Query: 75 QWSQISSESSPALCKMSKQRLLLFA--------SATECLQYINVYD 112
+ + S C + +Q + LF AT+ LQ +N Y+
Sbjct: 125 AYWRYGSWLGAIRCPICRQTVTLFLPLFGEDQQDATQVLQDVNDYN 170
>gi|348551466|ref|XP_003461551.1| PREDICTED: peroxisome biogenesis factor 10-like [Cavia porcellus]
Length = 325
Score = 35.4 bits (80), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 13/79 (16%)
Query: 6 FRQTQKRRLELPEIQQASKKQKNDNPSEDDSDGDRPTSPTSRCPICLLVLNNRSYTDT-- 63
FRQ Q+ R E + S ++ + ED + SR P+C L L R ++
Sbjct: 238 FRQRQRARKEWRLHRNLSHRRSS---VEDRA--------ASRAPLCTLCLEERRHSTATP 286
Query: 64 CLHEFCFLCIKQWSQISSE 82
C H FC+ CI +W +E
Sbjct: 287 CGHLFCWECITEWCNTKTE 305
>gi|158255276|dbj|BAF83609.1| unnamed protein product [Homo sapiens]
Length = 237
Score = 35.4 bits (80), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Query: 22 ASKKQKNDNPSEDDSDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISS 81
AS +Q+ P + GD CPICL V + +C H FC C++ Q+ S
Sbjct: 9 ASAQQRQ--PPAGPAGGDSGLEAQYTCPICLEVYHRPVAIGSCGHTFCGECLQPCLQVPS 66
Query: 82 ESSPALCKM 90
P LC++
Sbjct: 67 PLCP-LCRL 74
>gi|154322577|ref|XP_001560603.1| predicted protein [Botryotinia fuckeliana B05.10]
Length = 286
Score = 35.4 bits (80), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 24/58 (41%), Gaps = 1/58 (1%)
Query: 32 SEDDSDGDRPTSPTSRCPICLLVLNNR-SYTDTCLHEFCFLCIKQWSQISSESSPALC 88
S G+RP S CPIC L + + C H FC C+ W E A+C
Sbjct: 200 SPGKKGGERPREQKSTCPICTDELPAKVAVAKPCKHRFCKSCLADWMVHLGEGKEAIC 257
>gi|424513555|emb|CCO66177.1| unknown protein [Bathycoccus prasinos]
Length = 478
Score = 35.4 bits (80), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Query: 48 CPICLLV--LNNRSYTDTCLHEFCFLCIKQWS 77
C ICL L N +T CLH FC CI +W+
Sbjct: 122 CAICLTAPALENSCFTVPCLHSFCARCIVRWA 153
>gi|326492269|dbj|BAK01918.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 294
Score = 35.4 bits (80), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 35/92 (38%), Gaps = 2/92 (2%)
Query: 38 GDRPTSPTSRCPICL--LVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRL 95
GDR C ICL + L + C H +C CI +W+ CK + L
Sbjct: 48 GDRAAGGCGVCAICLDKIPLQETALVKGCDHAYCVTCILRWASYKQTPVCPQCKHPFEFL 107
Query: 96 LLFASATECLQYINVYDIMILQVNTSTFKGLF 127
+ S CL + + L + + FK L
Sbjct: 108 SVHRSLDGCLHDYMFDESVCLLLRATWFKPLV 139
>gi|291395922|ref|XP_002714373.1| PREDICTED: tripartite motif protein 15-like [Oryctolagus cuniculus]
Length = 466
Score = 35.4 bits (80), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSP-----ALCKMSKQRLLLFAS 100
CP C L + + T TC H FC LC++ SQ+ S++S LC+ +Q+ FA+
Sbjct: 16 CPACTRPLED-AVTATCGHTFCRLCLRAPSQMGSQASGRILLCPLCQEEEQQPESFAA 72
>gi|195134793|ref|XP_002011821.1| GI14410 [Drosophila mojavensis]
gi|193909075|gb|EDW07942.1| GI14410 [Drosophila mojavensis]
Length = 480
Score = 35.4 bits (80), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Query: 29 DNPSEDDSDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSP 85
D E D D D P S C IC+ LN T +C H FC C+ W Q ++ P
Sbjct: 94 DTSGEHDGDTDYPDS-RYECAICIDWLNEPVLT-SCGHRFCKSCLSDWLQNHNQCCP 148
>gi|452980264|gb|EME80025.1| hypothetical protein MYCFIDRAFT_86742 [Pseudocercospora fijiensis
CIRAD86]
Length = 461
Score = 35.4 bits (80), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 43 SPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQW 76
+P +CP+C + + T +C H FCF C+KQW
Sbjct: 24 APDQQCPVCHEPIVEPTST-SCGHVFCFKCLKQW 56
>gi|449463098|ref|XP_004149271.1| PREDICTED: putative E3 ubiquitin-protein ligase RING1a-like
[Cucumis sativus]
Length = 495
Score = 35.4 bits (80), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 20/39 (51%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPA 86
CPICL ++ CLH FC CI + ++ + PA
Sbjct: 109 CPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPA 147
>gi|390352308|ref|XP_790941.2| PREDICTED: midline-1-like [Strongylocentrotus purpuratus]
Length = 415
Score = 35.4 bits (80), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 32 SEDDSDGDRPTSPTS-RCPICLLVLNNRSYTDTCLHEFCFLCIKQW 76
+E +GD P S CP+CL++ + + +C H FC C++++
Sbjct: 2 AEKQEEGDVPNSSQGLTCPLCLVIFEDATLLTSCGHTFCRPCLRKY 47
>gi|335310026|ref|XP_003126381.2| PREDICTED: protein deltex-3-like [Sus scrofa]
Length = 471
Score = 35.4 bits (80), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 10/81 (12%)
Query: 46 SRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQ---------RLL 96
S CPICL + N + C H FC CI + Q+ ++ P + Q R+L
Sbjct: 286 STCPICLGEIQNAKTLEKCRHSFCEGCITRALQV-KKACPMCGRFYGQLVGNQPQNGRML 344
Query: 97 LFASATECLQYINVYDIMILQ 117
+ AT L Y +++Q
Sbjct: 345 VSKDATLLLPSYEKYGTIVIQ 365
>gi|330804547|ref|XP_003290255.1| hypothetical protein DICPUDRAFT_80999 [Dictyostelium purpureum]
gi|325079624|gb|EGC33215.1| hypothetical protein DICPUDRAFT_80999 [Dictyostelium purpureum]
Length = 426
Score = 35.4 bits (80), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 48 CPICLLVLNNRSYTD-TCLHEFCFLCIKQWSQISSESSPALCK 89
C IC LN+ + T C H+FC+ CI +W QI E + LC+
Sbjct: 295 CCICYTQLNSDNSTSIDCSHKFCYRCITKWYQI--EDTCPLCR 335
>gi|340368677|ref|XP_003382877.1| PREDICTED: bifunctional apoptosis regulator-like [Amphimedon
queenslandica]
Length = 554
Score = 35.4 bits (80), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 39/83 (46%), Gaps = 9/83 (10%)
Query: 15 ELPEIQQASKKQKNDNPSEDDSDG----DRPTSPTSRCPICLLVLNNRSYTDTCLHEFCF 70
EL + + SK+ ND ++D G D T C +C +L + T C H FC
Sbjct: 62 ELTDKEAPSKETAND---KEDIKGIVASDTQTKDVMSCGVCFQLLLD-PVTLNCGHSFCL 117
Query: 71 LCIKQWSQISSESSPALCKMSKQ 93
+C+ Q +S SS LC M +Q
Sbjct: 118 VCLAQLWNVSRNSS-LLCPMCRQ 139
>gi|195398504|ref|XP_002057861.1| GJ18365 [Drosophila virilis]
gi|194141515|gb|EDW57934.1| GJ18365 [Drosophila virilis]
Length = 334
Score = 35.4 bits (80), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 18/31 (58%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCIKQWSQ 78
CPIC VL + +C H FC CI++W Q
Sbjct: 18 CPICADVLEEPMQSSSCEHAFCRYCIEKWMQ 48
>gi|440799008|gb|ELR20069.1| hypothetical protein ACA1_114480 [Acanthamoeba castellanii str.
Neff]
Length = 416
Score = 35.4 bits (80), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Query: 46 SRCPICLLVLNNRSY---TDTCLHEFCFLCIKQWSQIS 80
+ C ICL+ + R + D C H C+ CI++W+Q S
Sbjct: 66 NECCICLIDMEERKFRGKMDCCDHVVCWCCIQEWAQTS 103
>gi|330845964|ref|XP_003294830.1| hypothetical protein DICPUDRAFT_159900 [Dictyostelium purpureum]
gi|325074629|gb|EGC28645.1| hypothetical protein DICPUDRAFT_159900 [Dictyostelium purpureum]
Length = 550
Score = 35.4 bits (80), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 48 CPICLLVLNNRSYTD-TCLHEFCFLCIKQWSQISSESSPALCK 89
C IC LN+ + T C H+FC+ CI +W QI E + LC+
Sbjct: 419 CCICYTQLNSDNSTSIDCSHKFCYRCITKWYQI--EDTCPLCR 459
>gi|342885084|gb|EGU85193.1| hypothetical protein FOXB_04308 [Fusarium oxysporum Fo5176]
Length = 443
Score = 35.4 bits (80), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 38/82 (46%), Gaps = 7/82 (8%)
Query: 47 RCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCKMSKQRLLL---FASATE 103
RC IC T TC H FC LCI++ +S+E LC+ S+Q L L +A
Sbjct: 28 RCQICKDFYKTPMIT-TCCHTFCSLCIRR--ALSNEGKCPLCRASEQELKLRSNWAMEEA 84
Query: 104 CLQYINVYDIMI-LQVNTSTFK 124
+IN + L N +T K
Sbjct: 85 VQAFINARPATLELARNANTKK 106
>gi|358338769|dbj|GAA31345.2| E3 ubiquitin-protein ligase RNF1/2 [Clonorchis sinensis]
Length = 388
Score = 35.0 bits (79), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 15/26 (57%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L T CLH FC CI
Sbjct: 43 CPICLDILKGTMTTKECLHRFCAECI 68
>gi|242039065|ref|XP_002466927.1| hypothetical protein SORBIDRAFT_01g016826 [Sorghum bicolor]
gi|241920781|gb|EER93925.1| hypothetical protein SORBIDRAFT_01g016826 [Sorghum bicolor]
Length = 207
Score = 35.0 bits (79), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 20/39 (51%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPA 86
CPICL ++ CLH FC CI + ++ + PA
Sbjct: 41 CPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPA 79
>gi|213513710|ref|NP_001134731.1| E3 ubiquitin-protein ligase NRDP1 [Salmo salar]
gi|209735502|gb|ACI68620.1| E3 ubiquitin-protein ligase NRDP1 [Salmo salar]
Length = 318
Score = 35.0 bits (79), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 15/29 (51%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCIKQW 76
CPIC +VL C H FC CI QW
Sbjct: 18 CPICSMVLEEPVQAPHCEHAFCNACITQW 46
>gi|449267318|gb|EMC78279.1| E3 ubiquitin-protein ligase RING2-A, partial [Columba livia]
Length = 124
Score = 35.0 bits (79), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCI 73
CPICL +L N T CLH FC CI
Sbjct: 23 CPICLDMLKNTMTTKECLHRFCSDCI 48
>gi|348550270|ref|XP_003460955.1| PREDICTED: RING finger protein 166-like [Cavia porcellus]
Length = 237
Score = 35.0 bits (79), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Query: 19 IQQASKKQKNDNPSEDDSDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQ 78
+ A ++Q P+ DS + S CPICL V + +C H FC C++ Q
Sbjct: 8 VASAHQRQPPAGPAGGDSGLEAQYS----CPICLEVYHRPVAIGSCGHTFCGECLQPCLQ 63
Query: 79 ISSESSPALCKM 90
+ S P LC++
Sbjct: 64 VPSPLCP-LCRL 74
>gi|405969328|gb|EKC34304.1| PHD and RING finger domain-containing protein 1 [Crassostrea gigas]
Length = 1047
Score = 35.0 bits (79), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Query: 48 CPICLLVLNNRSYT--DTCLHEFCFLCIKQWSQ 78
CPICL L ++ ++C H FC CI++W++
Sbjct: 104 CPICLDRLRDQDVGTPESCDHVFCLDCIQEWAK 136
>gi|308159357|gb|EFO61891.1| Zinc finger domain-containing protein [Giardia lamblia P15]
Length = 211
Score = 35.0 bits (79), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPALCK 89
CPIC+ N T C H +C+ C+K W S ES+ A+C+
Sbjct: 16 CPICMSDANYPVLT-QCGHIYCYSCLKLWLTNSRESNCAVCR 56
>gi|297807069|ref|XP_002871418.1| hypothetical protein ARALYDRAFT_487868 [Arabidopsis lyrata subsp.
lyrata]
gi|297317255|gb|EFH47677.1| hypothetical protein ARALYDRAFT_487868 [Arabidopsis lyrata subsp.
lyrata]
Length = 1782
Score = 35.0 bits (79), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Query: 18 EIQQASKKQKNDNPSEDDSDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWS 77
E++Q +K N+ E+ + G++ CPICL +++ + C H FC C+ +
Sbjct: 1535 EMRQEVQKMVNELAREESALGEKTDDIEIECPICLSEVDDGYSLEGCSHLFCKACLLEQF 1594
Query: 78 QISS---ESSPALC 88
+ S ++ P LC
Sbjct: 1595 EASMRNFDAFPILC 1608
>gi|154322545|ref|XP_001560587.1| predicted protein [Botryotinia fuckeliana B05.10]
Length = 486
Score = 35.0 bits (79), Expect = 9.6, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 8/71 (11%)
Query: 17 PEIQQASKKQKNDNPSEDDSDGDRPTSP-TSRCPIC---LLVLNNRSYTDTCLHEFCFLC 72
P I+QA + +P ++ PT+ T CPIC L+ N C H FC C
Sbjct: 296 PNIEQAQTTPEVSSPQVPEA----PTAASTDECPICISPLIAPLNAILVHPCRHAFCLKC 351
Query: 73 IKQWSQISSES 83
I+ W + +S
Sbjct: 352 IQTWIRTQRQS 362
>gi|149642683|ref|NP_001092604.1| RING finger protein 166 [Bos taurus]
gi|148877360|gb|AAI46100.1| RNF166 protein [Bos taurus]
gi|296478015|tpg|DAA20130.1| TPA: ring finger protein 166 [Bos taurus]
Length = 237
Score = 35.0 bits (79), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Query: 19 IQQASKKQKNDNPSEDDSDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQ 78
+ A ++Q P+ DS + S CPICL V + +C H FC C++ Q
Sbjct: 8 VGSAQQRQPPGGPAGGDSALEAQYS----CPICLEVYHRPVAIGSCGHTFCGECLQPCLQ 63
Query: 79 ISSESSPALCKM 90
+ S P LC++
Sbjct: 64 VPSPLCP-LCRL 74
>gi|326490487|dbj|BAJ84907.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 443
Score = 35.0 bits (79), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 20/39 (51%)
Query: 48 CPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISSESSPA 86
CPICL ++ CLH FC CI + ++ + PA
Sbjct: 122 CPICLGIIRKTRTVMECLHRFCRDCIDKSMRLGNNECPA 160
>gi|432907585|ref|XP_004077666.1| PREDICTED: E3 ubiquitin-protein ligase RNF19A-like [Oryzias
latipes]
Length = 865
Score = 35.0 bits (79), Expect = 9.8, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 14/72 (19%)
Query: 48 CPICLLVLNNRSYTD--TCLHEFCFLCIKQWSQISSESSPALCKMSKQRLLLFASATECL 105
CP+CLL + S+ D TC H C C++Q+ +I ++ + R+ + S EC
Sbjct: 129 CPLCLLRHSRESFPDIMTCYHRSCIDCLRQYLRI---------EILESRVNI--SCPECS 177
Query: 106 QYINVYDI-MIL 116
+ N +DI MIL
Sbjct: 178 ERFNPHDICMIL 189
>gi|50511320|ref|NP_001002279.1| RING finger protein 166 [Rattus norvegicus]
gi|84794603|ref|NP_001028314.1| RING finger protein 166 [Mus musculus]
gi|81863790|sp|Q6J1I7.1|RN166_RAT RecName: Full=RING finger protein 166
gi|110287942|sp|Q3U9F6.1|RN166_MOUSE RecName: Full=RING finger protein 166
gi|47607449|gb|AAT36621.1| zinc finger protein [Rattus norvegicus]
gi|71679713|gb|AAI00058.1| Ring finger protein 166 [Rattus norvegicus]
gi|74198987|dbj|BAE30711.1| unnamed protein product [Mus musculus]
gi|124297264|gb|AAI31925.1| Ring finger protein 166 [Mus musculus]
gi|124297931|gb|AAI32282.1| Ring finger protein 166 [Mus musculus]
gi|148679739|gb|EDL11686.1| mCG14177, isoform CRA_b [Mus musculus]
gi|149038390|gb|EDL92750.1| rCG51367, isoform CRA_a [Rattus norvegicus]
Length = 237
Score = 35.0 bits (79), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Query: 22 ASKKQKNDNPSEDDSDGDRPTSPTSRCPICLLVLNNRSYTDTCLHEFCFLCIKQWSQISS 81
AS +Q+ P + GD CPICL V + +C H FC C++ Q+ S
Sbjct: 9 ASAQQRQ--PPAGPAGGDSGLEAQFSCPICLEVYHRPVAIGSCGHTFCGECLQPCLQVPS 66
Query: 82 ESSPALCKM 90
P LC++
Sbjct: 67 PLCP-LCRL 74
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.322 0.134 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,262,184,492
Number of Sequences: 23463169
Number of extensions: 81178418
Number of successful extensions: 282656
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 477
Number of HSP's successfully gapped in prelim test: 684
Number of HSP's that attempted gapping in prelim test: 281808
Number of HSP's gapped (non-prelim): 1348
length of query: 153
length of database: 8,064,228,071
effective HSP length: 116
effective length of query: 37
effective length of database: 9,637,467,763
effective search space: 356586307231
effective search space used: 356586307231
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 71 (32.0 bits)