BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6063
(108 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P70423|CTR3_MOUSE Cationic amino acid transporter 3 OS=Mus musculus GN=Slc7a3 PE=2
SV=1
Length = 618
Score = 68.9 bits (167), Expect = 1e-11, Method: Composition-based stats.
Identities = 34/62 (54%), Positives = 46/62 (74%)
Query: 43 LERASDAPQLARVLGLIDLTMLGVGATLGVGVYVLAGSVARNQAGPSVVISFAIAAVTSL 102
LE +LAR L +DL LGVG+TLG GVYVLAG VA+++AGPS+VI F +AA++S+
Sbjct: 19 LELGMGETRLARCLSTLDLVALGVGSTLGAGVYVLAGEVAKDKAGPSIVICFLVAALSSV 78
Query: 103 FS 104
+
Sbjct: 79 LA 80
>sp|O08812|CTR3_RAT Cationic amino acid transporter 3 OS=Rattus norvegicus GN=Slc7a3
PE=2 SV=1
Length = 619
Score = 68.6 bits (166), Expect = 1e-11, Method: Composition-based stats.
Identities = 34/62 (54%), Positives = 45/62 (72%)
Query: 43 LERASDAPQLARVLGLIDLTMLGVGATLGVGVYVLAGSVARNQAGPSVVISFAIAAVTSL 102
LE +LAR L +DL LGVG+TLG GVYVLAG VA+ +AGPS+VI F +AA++S+
Sbjct: 19 LELGMGETRLARCLSTLDLVALGVGSTLGAGVYVLAGEVAKEKAGPSIVICFLVAALSSV 78
Query: 103 FS 104
+
Sbjct: 79 LA 80
>sp|Q8WY07|CTR3_HUMAN Cationic amino acid transporter 3 OS=Homo sapiens GN=SLC7A3 PE=1
SV=1
Length = 619
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 48/69 (69%)
Query: 34 GADGVGKLPLERASDAPQLARVLGLIDLTMLGVGATLGVGVYVLAGSVARNQAGPSVVIS 93
G V + LE +LAR L +DL LGVG+TLG GVYVLAG VA+++AGPS+VI
Sbjct: 10 GQKLVRRRTLESGMAETRLARCLSTLDLVALGVGSTLGAGVYVLAGEVAKDKAGPSIVIC 69
Query: 94 FAIAAVTSL 102
F +AA++S+
Sbjct: 70 FLVAALSSV 78
>sp|Q09143|CTR1_MOUSE High affinity cationic amino acid transporter 1 OS=Mus musculus
GN=Slc7a1 PE=2 SV=1
Length = 622
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 50/73 (68%), Gaps = 5/73 (6%)
Query: 37 GVGKLPLER-----ASDAPQLARVLGLIDLTMLGVGATLGVGVYVLAGSVARNQAGPSVV 91
G+G+ L R + + +L+R L DL LGVG+TLG GVYVLAG+VAR AGP++V
Sbjct: 8 GLGQQMLRRKVVDCSREESRLSRCLNTYDLVALGVGSTLGAGVYVLAGAVARENAGPAIV 67
Query: 92 ISFAIAAVTSLFS 104
ISF IAA+ S+ +
Sbjct: 68 ISFLIAALASVLA 80
>sp|Q5PR34|CTR2_DANRE Low affinity cationic amino acid transporter 2 OS=Danio rerio
GN=slc7a2 PE=2 SV=1
Length = 640
Score = 65.9 bits (159), Expect = 7e-11, Method: Composition-based stats.
Identities = 31/54 (57%), Positives = 41/54 (75%)
Query: 51 QLARVLGLIDLTMLGVGATLGVGVYVLAGSVARNQAGPSVVISFAIAAVTSLFS 104
+L R L +DL LGVG+TLG GVYVLAG VA+ +GPS+V+SF IAA+ S+ +
Sbjct: 27 KLCRCLSTVDLIALGVGSTLGAGVYVLAGEVAKGSSGPSIVVSFLIAALASVMA 80
>sp|P30825|CTR1_HUMAN High affinity cationic amino acid transporter 1 OS=Homo sapiens
GN=SLC7A1 PE=1 SV=1
Length = 629
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/57 (57%), Positives = 43/57 (75%)
Query: 48 DAPQLARVLGLIDLTMLGVGATLGVGVYVLAGSVARNQAGPSVVISFAIAAVTSLFS 104
+ +L+R L DL LGVG+TLG GVYVLAG+VAR AGP++VISF IAA+ S+ +
Sbjct: 24 EETRLSRCLNTFDLVALGVGSTLGAGVYVLAGAVARENAGPAIVISFLIAALASVLA 80
>sp|P30823|CTR1_RAT High affinity cationic amino acid transporter 1 OS=Rattus
norvegicus GN=Slc7a1 PE=2 SV=1
Length = 624
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/57 (57%), Positives = 43/57 (75%)
Query: 48 DAPQLARVLGLIDLTMLGVGATLGVGVYVLAGSVARNQAGPSVVISFAIAAVTSLFS 104
+ +L+R L DL LGVG+TLG GVYVLAG+VAR AGP++VISF IAA+ S+ +
Sbjct: 24 EESRLSRCLNTYDLVALGVGSTLGAGVYVLAGAVARENAGPAIVISFLIAALASVLA 80
>sp|Q6DCE8|CTR2_XENLA Low affinity cationic amino acid transporter 2 OS=Xenopus laevis
GN=slc7a2 PE=2 SV=1
Length = 622
Score = 63.5 bits (153), Expect = 4e-10, Method: Composition-based stats.
Identities = 31/59 (52%), Positives = 42/59 (71%)
Query: 46 ASDAPQLARVLGLIDLTMLGVGATLGVGVYVLAGSVARNQAGPSVVISFAIAAVTSLFS 104
+ + L R L +DL LGVG+TLG GVYVLAG VA+ +GPS++ISF IAA+ S+ +
Sbjct: 24 GTGSSDLCRCLSTLDLVALGVGSTLGAGVYVLAGEVAKVDSGPSIIISFLIAALASVLA 82
>sp|B3TP03|CTR2_CHICK Low affinity cationic amino acid transporter 2 OS=Gallus gallus
GN=SLC7A2 PE=2 SV=1
Length = 654
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 40/51 (78%)
Query: 52 LARVLGLIDLTMLGVGATLGVGVYVLAGSVARNQAGPSVVISFAIAAVTSL 102
L R L +DL LGVG+TLG GVYVLAG VA++ +GPS+V+SF IAA+ S+
Sbjct: 29 LCRCLSTLDLIALGVGSTLGAGVYVLAGEVAKSDSGPSIVVSFLIAALASV 79
>sp|A8I499|CTR2_PIG Low affinity cationic amino acid transporter 2 OS=Sus scrofa
GN=SLC7A2 PE=2 SV=1
Length = 657
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 40/52 (76%)
Query: 51 QLARVLGLIDLTMLGVGATLGVGVYVLAGSVARNQAGPSVVISFAIAAVTSL 102
+L R L +DL LGVG+TLG GVYVLAG VA+ +GPS+V+SF IAA+ S+
Sbjct: 29 KLCRCLSTMDLIALGVGSTLGAGVYVLAGEVAKADSGPSIVVSFLIAALASV 80
>sp|P18581|CTR2_MOUSE Low affinity cationic amino acid transporter 2 OS=Mus musculus
GN=Slc7a2 PE=1 SV=3
Length = 657
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 40/52 (76%)
Query: 51 QLARVLGLIDLTMLGVGATLGVGVYVLAGSVARNQAGPSVVISFAIAAVTSL 102
+L R L +DL LGVG+TLG GVYVLAG VA+ +GPS+V+SF IAA+ S+
Sbjct: 29 KLCRCLTTVDLIALGVGSTLGAGVYVLAGEVAKADSGPSIVVSFLIAALASV 80
>sp|P52569|CTR2_HUMAN Low affinity cationic amino acid transporter 2 OS=Homo sapiens
GN=SLC7A2 PE=1 SV=2
Length = 658
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 40/52 (76%)
Query: 51 QLARVLGLIDLTMLGVGATLGVGVYVLAGSVARNQAGPSVVISFAIAAVTSL 102
+L R L +DL LGVG+TLG GVYVLAG VA+ +GPS+V+SF IAA+ S+
Sbjct: 29 KLCRCLSTMDLIALGVGSTLGAGVYVLAGEVAKADSGPSIVVSFLIAALASV 80
>sp|B5D5N9|CTR2_RAT Low affinity cationic amino acid transporter 2 OS=Rattus norvegicus
GN=Slc7a2 PE=2 SV=1
Length = 657
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 40/52 (76%)
Query: 51 QLARVLGLIDLTMLGVGATLGVGVYVLAGSVARNQAGPSVVISFAIAAVTSL 102
+L R L +DL LGVG+TLG GVYVLAG VA+ +GPS+V+SF IAA+ S+
Sbjct: 29 KLCRCLTTMDLIALGVGSTLGAGVYVLAGEVAKADSGPSIVVSFLIAALASV 80
>sp|Q8BXR1|S7A14_MOUSE Probable cationic amino acid transporter OS=Mus musculus GN=Slc7a14
PE=2 SV=1
Length = 771
Score = 61.6 bits (148), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/59 (49%), Positives = 43/59 (72%)
Query: 46 ASDAPQLARVLGLIDLTMLGVGATLGVGVYVLAGSVARNQAGPSVVISFAIAAVTSLFS 104
++ +LA+VL +DL LGVG+ +G G+YV++G VA+ AGP V++SF IAAV S+ S
Sbjct: 43 SAHGTKLAQVLTTVDLISLGVGSCVGTGMYVVSGLVAKEMAGPGVIVSFIIAAVASILS 101
>sp|Q8TBB6|S7A14_HUMAN Probable cationic amino acid transporter OS=Homo sapiens GN=SLC7A14
PE=2 SV=3
Length = 771
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/54 (53%), Positives = 41/54 (75%)
Query: 51 QLARVLGLIDLTMLGVGATLGVGVYVLAGSVARNQAGPSVVISFAIAAVTSLFS 104
+LA+VL +DL LGVG+ +G G+YV++G VA+ AGP V++SF IAAV S+ S
Sbjct: 48 KLAQVLTTVDLISLGVGSCVGTGMYVVSGLVAKEMAGPGVIVSFIIAAVASILS 101
>sp|A0JNI9|S7A14_BOVIN Probable cationic amino acid transporter OS=Bos taurus GN=SLC7A14
PE=2 SV=1
Length = 771
Score = 61.2 bits (147), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/54 (53%), Positives = 41/54 (75%)
Query: 51 QLARVLGLIDLTMLGVGATLGVGVYVLAGSVARNQAGPSVVISFAIAAVTSLFS 104
+LA+VL +DL LGVG+ +G G+YV++G VA+ AGP V++SF IAAV S+ S
Sbjct: 48 KLAQVLTTMDLISLGVGSCVGTGMYVVSGLVAKEMAGPGVIVSFIIAAVASILS 101
>sp|Q8BLQ7|CTR4_MOUSE Cationic amino acid transporter 4 OS=Mus musculus GN=Slc7a4 PE=1
SV=1
Length = 635
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 39/53 (73%)
Query: 42 PLERASDAPQLARVLGLIDLTMLGVGATLGVGVYVLAGSVARNQAGPSVVISF 94
PLE +S L R L +DLT+LGVG +G G+YVL G+VA++ AGP+V++SF
Sbjct: 23 PLEESSMETSLRRCLSTLDLTLLGVGGMVGSGLYVLTGTVAKDMAGPAVLLSF 75
>sp|Q9ASS7|CAAT2_ARATH Cationic amino acid transporter 2, vacuolar OS=Arabidopsis thaliana
GN=CAT2 PE=1 SV=1
Length = 635
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%)
Query: 47 SDAPQLARVLGLIDLTMLGVGATLGVGVYVLAGSVARNQAGPSVVISFAIAAVTS 101
S QLAR L + L +GVGAT+G GVY+L G+VAR +GPS+ +SF IA + +
Sbjct: 35 SHGHQLARALTVPHLVAIGVGATIGAGVYILVGTVAREHSGPSLALSFLIAGIAA 89
>sp|Q8W4K3|CAAT4_ARATH Cationic amino acid transporter 4, vacuolar OS=Arabidopsis thaliana
GN=CAT4 PE=1 SV=1
Length = 600
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 47 SDAP-QLARVLGLIDLTMLGVGATLGVGVYVLAGSVARNQAGPSVVISFAIAAVTSLFS 104
+D P QLA+ L +DL +GVG T+G GVY+L G+VAR GP++ +SF IA V + S
Sbjct: 18 NDGPHQLAKKLSAVDLVAIGVGTTIGAGVYILVGTVAREHTGPALAVSFFIAGVAAALS 76
>sp|O43246|CTR4_HUMAN Cationic amino acid transporter 4 OS=Homo sapiens GN=SLC7A4 PE=2
SV=3
Length = 635
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 38/53 (71%)
Query: 42 PLERASDAPQLARVLGLIDLTMLGVGATLGVGVYVLAGSVARNQAGPSVVISF 94
PLE ++ L R L +DLT+LGVG +G G+YVL G+VA+ AGP+V++SF
Sbjct: 23 PLEDSTMETSLRRCLSTLDLTLLGVGGMVGSGLYVLTGAVAKEVAGPAVLLSF 75
>sp|Q8GYB4|CAAT3_ARATH Cationic amino acid transporter 3, mitochondrial OS=Arabidopsis
thaliana GN=CAT3 PE=2 SV=1
Length = 609
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 39/61 (63%)
Query: 44 ERASDAPQLARVLGLIDLTMLGVGATLGVGVYVLAGSVARNQAGPSVVISFAIAAVTSLF 103
E QLA+ L L +GVG+T+G GVY+L G+VAR +GP++ +SF IA +++
Sbjct: 21 ETHHHHQQLAKALTFPHLIAIGVGSTIGAGVYILVGTVAREHSGPALALSFLIAGISAAL 80
Query: 104 S 104
S
Sbjct: 81 S 81
>sp|Q84MA5|CAAT1_ARATH Cationic amino acid transporter 1 OS=Arabidopsis thaliana GN=CAT1
PE=1 SV=1
Length = 594
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 40/62 (64%)
Query: 45 RASDAPQLARVLGLIDLTMLGVGATLGVGVYVLAGSVARNQAGPSVVISFAIAAVTSLFS 104
+A ++ + L DL G+GA +G G++VL G ARN +GP+VV+S+ ++ V+++ S
Sbjct: 63 KARSGHEMKKTLTWWDLMWFGIGAVIGSGIFVLTGLEARNHSGPAVVLSYVVSGVSAMLS 122
Query: 105 VI 106
V
Sbjct: 123 VF 124
>sp|Q9C5D6|CAAT9_ARATH Cationic amino acid transporter 9, chloroplastic OS=Arabidopsis
thaliana GN=CAT9 PE=2 SV=1
Length = 569
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Query: 45 RASDAPQLARVLGLIDLTMLGVGATLGVGVYVLAGSVARNQAGPSVVISFAIA 97
R++ L R LGL DL +LGVGA++G GV+V+ G+VAR+ AGP V ISF +A
Sbjct: 41 RSTSGDSLVRRLGLFDLILLGVGASIGAGVFVVTGTVARD-AGPGVTISFLLA 92
>sp|Q797A7|YFNA_BACSU Uncharacterized amino acid permease YfnA OS=Bacillus subtilis
(strain 168) GN=yfnA PE=3 SV=1
Length = 461
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 38/58 (65%), Gaps = 3/58 (5%)
Query: 40 KLPLER---ASDAPQLARVLGLIDLTMLGVGATLGVGVYVLAGSVARNQAGPSVVISF 94
K PLE S + LAR L DLT+LG+G +G G++V+ G+VA AGP+++ISF
Sbjct: 7 KKPLETLSAQSKSKSLARTLSAFDLTLLGIGCVIGTGIFVITGTVAATGAGPALIISF 64
>sp|Q9SHH0|CAAT8_ARATH Cationic amino acid transporter 8, vacuolar OS=Arabidopsis thaliana
GN=CAT8 PE=1 SV=1
Length = 590
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 44 ERASDAPQLARVLGLIDLTMLGVGATLGVGVYVLAGSVARNQAGPSVVISFAIAAVTSLF 103
R S+ P + R L DL L G+ +G GV+V+ G AR AGP+VV+S+AI+ V++L
Sbjct: 74 RRESENP-MRRCLTWWDLLWLSFGSVVGSGVFVITGQEARVGAGPAVVLSYAISGVSALL 132
Query: 104 SVI 106
SV+
Sbjct: 133 SVL 135
>sp|Q9LZ20|CAAT6_ARATH Cationic amino acid transporter 6, chloroplastic OS=Arabidopsis
thaliana GN=CAT6 PE=2 SV=1
Length = 583
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 37/60 (61%)
Query: 45 RASDAPQLARVLGLIDLTMLGVGATLGVGVYVLAGSVARNQAGPSVVISFAIAAVTSLFS 104
RA Q+ R L DL LG+G +G GV+V G +R AGPS+V+S+AIA + +L S
Sbjct: 50 RAVSGEQMRRTLRWYDLIGLGIGGMVGAGVFVTTGRASRLDAGPSIVVSYAIAGLCALLS 109
>sp|O64759|CAAT5_ARATH Cationic amino acid transporter 5 OS=Arabidopsis thaliana GN=CAT5
PE=1 SV=1
Length = 569
Score = 50.1 bits (118), Expect = 5e-06, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 36/55 (65%)
Query: 51 QLARVLGLIDLTMLGVGATLGVGVYVLAGSVARNQAGPSVVISFAIAAVTSLFSV 105
++ R L DL G G+ +G G++VL G A QAGP++V+S+ ++ ++++ SV
Sbjct: 63 EMKRCLTWWDLVWFGFGSVIGAGIFVLTGQEAHEQAGPAIVLSYVVSGLSAMLSV 117
>sp|Q9P5N2|AAT1_SCHPO Amino acid transporter 1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=aat1 PE=3 SV=1
Length = 579
Score = 37.7 bits (86), Expect = 0.019, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 9/85 (10%)
Query: 24 SIAEGKNPAGGADGVGKLPLERASDAPQLARVLGLIDLTMLGVGATLGVGVYVLAGSVAR 83
++ +G PA ADG G P L R L + ++ +G +G G+YV +GS
Sbjct: 54 NLIDGFKPAREADGNG---------GPALKRGLSTRHMQLMSIGGAIGSGLYVGSGSALA 104
Query: 84 NQAGPSVVISFAIAAVTSLFSVIIL 108
+ SV+I++ + + F + L
Sbjct: 105 DGGPASVIINYILIGIMMFFVIYAL 129
>sp|P27837|YIFK_ECOLI Probable transport protein YifK OS=Escherichia coli (strain K12)
GN=yifK PE=1 SV=4
Length = 461
Score = 37.7 bits (86), Expect = 0.019, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 46 ASDAPQLARVLGLIDLTMLGVGATLGVGVYVLAGSVARNQAGPSVVISFAIAAVTSLF 103
A + P+L R L + ++ +G T+GVG+++ A S + AGPSV++++ IA + F
Sbjct: 2 ADNKPELQRGLEARHIELIALGGTIGVGLFMGAASTLK-WAGPSVLLAYIIAGLFVFF 58
>sp|P38967|TAT2_YEAST Tryptophan permease OS=Saccharomyces cerevisiae (strain ATCC 204508
/ S288c) GN=TAT2 PE=1 SV=1
Length = 592
Score = 37.0 bits (84), Expect = 0.034, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 40 KLPLERASDAPQLARVLGLIDLTMLGVGATLGVGVYVLAGSVARNQAGP-SVVISFAIAA 98
K PL+ + D L R L L M+ +G ++G G++V +G A + GP VVI +AIA
Sbjct: 66 KSPLDGSFDTSNLKRTLKPRHLIMIAIGGSIGTGLFVGSGK-AIAEGGPLGVVIGWAIAG 124
>sp|P0A189|YIFK_SALTY Probable transport protein YifK OS=Salmonella typhimurium (strain
LT2 / SGSC1412 / ATCC 700720) GN=yifK PE=3 SV=1
Length = 461
Score = 37.0 bits (84), Expect = 0.035, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 46 ASDAPQLARVLGLIDLTMLGVGATLGVGVYVLAGSVARNQAGPSVVISFAIAAVTSLF 103
A P+L R L + ++ +G T+GVG+++ A S + AGPSV++++ IA + F
Sbjct: 2 AEKKPELQRGLEARHIELIALGGTIGVGLFMGAASTLK-WAGPSVLLAYIIAGLFVFF 58
>sp|P0A190|YIFK_SALTI Probable transport protein YifK OS=Salmonella typhi GN=yifK PE=3
SV=1
Length = 461
Score = 37.0 bits (84), Expect = 0.035, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 46 ASDAPQLARVLGLIDLTMLGVGATLGVGVYVLAGSVARNQAGPSVVISFAIAAVTSLF 103
A P+L R L + ++ +G T+GVG+++ A S + AGPSV++++ IA + F
Sbjct: 2 AEKKPELQRGLEARHIELIALGGTIGVGLFMGAASTLK-WAGPSVLLAYIIAGLFVFF 58
>sp|Q9SQZ0|CAAT7_ARATH Cationic amino acid transporter 7, chloroplastic OS=Arabidopsis
thaliana GN=CAT7 PE=3 SV=1
Length = 584
Score = 36.6 bits (83), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 37/60 (61%)
Query: 45 RASDAPQLARVLGLIDLTMLGVGATLGVGVYVLAGSVARNQAGPSVVISFAIAAVTSLFS 104
RA Q+ R L DL LG+G +G GV+V G +R AGPS+V+S+AIA + +L S
Sbjct: 49 RAVSGEQMRRTLRWYDLIGLGIGGMIGAGVFVTTGRASRLYAGPSIVVSYAIAGLCALLS 108
>sp|P94383|YCGH_BACSU Uncharacterized transporter YcgH OS=Bacillus subtilis (strain 168)
GN=ycgH PE=3 SV=3
Length = 446
Score = 35.8 bits (81), Expect = 0.087, Method: Composition-based stats.
Identities = 18/43 (41%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Query: 61 LTMLGVGATLGVGVYVLAGSVARNQAGPSVVISFAIAAVTSLF 103
L+++GVG T+G G + L S+A ++G SV++SF IA + + F
Sbjct: 18 LSLIGVGCTIGTGFF-LGSSIAIVKSGFSVLLSFLIAGIGTYF 59
>sp|Q45577|YBEC_BACSU Probable amino acid-proton symporter YbeC OS=Bacillus subtilis
(strain 168) GN=ybeC PE=3 SV=3
Length = 539
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 51 QLARVLGLIDLTMLGVGATLGVGVYVLAGSVARNQAGPSVVISFAIAAVTSLF 103
QL R +G L M+G+G+ +G G ++ A AGP+ +IS+ I V LF
Sbjct: 3 QLHRRMGTFSLMMVGLGSMIGSG-WLFGAWRAAQIAGPAAIISWVIGMVVILF 54
>sp|P54425|YBXG_BACSU Uncharacterized transporter YbxG OS=Bacillus subtilis (strain 168)
GN=ybxG PE=3 SV=2
Length = 462
Score = 35.0 bits (79), Expect = 0.14, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 51 QLARVLGLIDLTMLGVGATLGVGVYVLAGSVARNQAGPSVVISFAIAAVTSLF 103
+L R LG + M+ +G T+GVG+++ + S + GPSV++++AI + F
Sbjct: 5 ELKRGLGARHIQMIALGGTIGVGLFMGSASTI-SWTGPSVLLAYAICGIFIFF 56
>sp|Q9URZ4|CAT1_SCHPO Cationic amino acid transporter 1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=cat1 PE=1 SV=3
Length = 587
Score = 35.0 bits (79), Expect = 0.14, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 31/61 (50%)
Query: 48 DAPQLARVLGLIDLTMLGVGATLGVGVYVLAGSVARNQAGPSVVISFAIAAVTSLFSVII 107
D L R L + M+ +G +G G+YV +GS + SV+I++++ + F V
Sbjct: 76 DGTALKRSLKSRHMQMISIGGAIGTGLYVGSGSSLADGGPASVIINYSLIGIMMFFIVYA 135
Query: 108 L 108
L
Sbjct: 136 L 136
>sp|P25737|LYSP_ECOLI Lysine-specific permease OS=Escherichia coli (strain K12) GN=lysP
PE=1 SV=5
Length = 489
Score = 34.3 bits (77), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 45 RASDAPQLARVLGLIDLTMLGVGATLGVGVYVLAGSVARNQAGP 88
+ ++AP L R L LTM+ +G ++G G++V +G+ +QAGP
Sbjct: 6 KTTEAPGLRRELKARHLTMIAIGGSIGTGLFVASGATI-SQAGP 48
>sp|Q9P5N4|YH81_SCHPO Uncharacterized amino-acid permease C359.01 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPBC359.01 PE=3 SV=2
Length = 581
Score = 33.5 bits (75), Expect = 0.37, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 33/69 (47%)
Query: 40 KLPLERASDAPQLARVLGLIDLTMLGVGATLGVGVYVLAGSVARNQAGPSVVISFAIAAV 99
K L D L R L + M+ VG +G G+YV +GS + SV+I++ + +
Sbjct: 61 KPALTTRGDGVALKRKLTSRHMQMISVGGAIGSGLYVGSGSAFADGGPASVIINYILIGI 120
Query: 100 TSLFSVIIL 108
+F + L
Sbjct: 121 MMIFVIYAL 129
>sp|O34560|YECA_BACSU Uncharacterized amino acid permease YecA OS=Bacillus subtilis
(strain 168) GN=yecA PE=3 SV=2
Length = 424
Score = 33.1 bits (74), Expect = 0.54, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 50 PQLARVLGLIDLTMLGVGATLGVGVYVLAGSVARNQAGPSVVISFAIAAVTSLFSV 105
P+L R + I T L +GA LG G+ +L SV + AGP+ + + + S F V
Sbjct: 3 PELQRSITWIQGTALTIGAVLGCGILILP-SVTADTAGPASLFVWVFMSFLSFFLV 57
>sp|Q7ZAM0|XERD_SHIFL Tyrosine recombinase XerD OS=Shigella flexneri GN=xerD PE=3 SV=1
Length = 298
Score = 32.7 bits (73), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 36/79 (45%)
Query: 1 MSRLRNLYEALSRKKIDVGDDDVSIAEGKNPAGGADGVGKLPLERASDAPQLARVLGLID 60
+S +R L++ L R+K D +A K P + + +ER AP + + L L D
Sbjct: 76 LSAVRRLFQYLYREKFREDDPSAHLASPKLPQRLPKDLSEAQVERLLQAPLIDQPLELRD 135
Query: 61 LTMLGVGATLGVGVYVLAG 79
ML V G+ V L G
Sbjct: 136 KAMLEVLYATGLRVSELVG 154
>sp|P0A8P8|XERD_ECOLI Tyrosine recombinase XerD OS=Escherichia coli (strain K12) GN=xerD
PE=1 SV=1
Length = 298
Score = 32.7 bits (73), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 36/79 (45%)
Query: 1 MSRLRNLYEALSRKKIDVGDDDVSIAEGKNPAGGADGVGKLPLERASDAPQLARVLGLID 60
+S +R L++ L R+K D +A K P + + +ER AP + + L L D
Sbjct: 76 LSAVRRLFQYLYREKFREDDPSAHLASPKLPQRLPKDLSEAQVERLLQAPLIDQPLELRD 135
Query: 61 LTMLGVGATLGVGVYVLAG 79
ML V G+ V L G
Sbjct: 136 KAMLEVLYATGLRVSELVG 154
>sp|P0A8P9|XERD_ECOL6 Tyrosine recombinase XerD OS=Escherichia coli O6:H1 (strain CFT073
/ ATCC 700928 / UPEC) GN=xerD PE=3 SV=1
Length = 298
Score = 32.7 bits (73), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 36/79 (45%)
Query: 1 MSRLRNLYEALSRKKIDVGDDDVSIAEGKNPAGGADGVGKLPLERASDAPQLARVLGLID 60
+S +R L++ L R+K D +A K P + + +ER AP + + L L D
Sbjct: 76 LSAVRRLFQYLYREKFREDDPSAHLASPKLPQRLPKDLSEAQVERLLQAPLIDQPLELRD 135
Query: 61 LTMLGVGATLGVGVYVLAG 79
ML V G+ V L G
Sbjct: 136 KAMLEVLYATGLRVSELVG 154
>sp|Q9P768|YI26_SCHPO Uncharacterized amino-acid permease P7G5.06 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAP7G5.06 PE=3 SV=1
Length = 583
Score = 32.7 bits (73), Expect = 0.69, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 30/61 (49%)
Query: 48 DAPQLARVLGLIDLTMLGVGATLGVGVYVLAGSVARNQAGPSVVISFAIAAVTSLFSVII 107
D L R L + M+ +G +G G++V +GS + SV+I + + + F+V
Sbjct: 76 DGVALKRHLKGRHMQMIAIGGAIGTGLFVGSGSSLADGGPASVIIDYTLIGIMMFFTVYA 135
Query: 108 L 108
L
Sbjct: 136 L 136
>sp|Q8X574|XERD_ECO57 Tyrosine recombinase XerD OS=Escherichia coli O157:H7 GN=xerD PE=3
SV=1
Length = 298
Score = 32.7 bits (73), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 36/79 (45%)
Query: 1 MSRLRNLYEALSRKKIDVGDDDVSIAEGKNPAGGADGVGKLPLERASDAPQLARVLGLID 60
+S +R L++ L R+K D +A K P + + +ER AP + + L L D
Sbjct: 76 LSAVRRLFQYLYREKFREDDPSAHLASPKLPQRLPKDLSEAQVERLLQAPLIDQPLELRD 135
Query: 61 LTMLGVGATLGVGVYVLAG 79
ML V G+ V L G
Sbjct: 136 KAMLEVLYATGLRVSELVG 154
>sp|P0A2P6|XERD_SALTY Tyrosine recombinase XerD OS=Salmonella typhimurium (strain LT2 /
SGSC1412 / ATCC 700720) GN=xerD PE=1 SV=1
Length = 298
Score = 32.3 bits (72), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 35/79 (44%)
Query: 1 MSRLRNLYEALSRKKIDVGDDDVSIAEGKNPAGGADGVGKLPLERASDAPQLARVLGLID 60
+S +R ++ L R+K D +A K P + + +ER AP + + L L D
Sbjct: 76 LSAMRRFFQHLYREKYREDDPSAQLASPKLPQRLPKDLSEAQVERLLQAPLIDQPLELRD 135
Query: 61 LTMLGVGATLGVGVYVLAG 79
ML V G+ V L G
Sbjct: 136 KAMLEVLYATGLRVSELVG 154
>sp|P0A2P7|XERD_SALTI Tyrosine recombinase XerD OS=Salmonella typhi GN=xerD PE=3 SV=1
Length = 298
Score = 32.3 bits (72), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 35/79 (44%)
Query: 1 MSRLRNLYEALSRKKIDVGDDDVSIAEGKNPAGGADGVGKLPLERASDAPQLARVLGLID 60
+S +R ++ L R+K D +A K P + + +ER AP + + L L D
Sbjct: 76 LSAMRRFFQHLYREKYREDDPSAQLASPKLPQRLPKDLSEAQVERLLQAPLIDQPLELRD 135
Query: 61 LTMLGVGATLGVGVYVLAG 79
ML V G+ V L G
Sbjct: 136 KAMLEVLYATGLRVSELVG 154
>sp|O32257|YVBW_BACSU Uncharacterized amino acid permease YvbW OS=Bacillus subtilis
(strain 168) GN=yvbW PE=3 SV=1
Length = 447
Score = 32.3 bits (72), Expect = 1.0, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 47 SDAPQLARVLGLIDLTMLGVGATLGVGVYVLAGSVARNQAGPSVVISFAIAAVTSLF 103
+D L R + + M+ +G +G G++ S A + AGPSV+I++ + + LF
Sbjct: 3 NDNQTLKRTMTSRHIMMMALGGAIGAGLFK-GSSSAIDVAGPSVIIAYLLGGIILLF 58
>sp|P06775|HIP1_YEAST Histidine permease OS=Saccharomyces cerevisiae (strain ATCC 204508
/ S288c) GN=HIP1 PE=1 SV=2
Length = 603
Score = 32.0 bits (71), Expect = 1.1, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 52 LARVLGLIDLTMLGVGATLGVGVYVLAGSVARNQAGPSVVISFAIAAVTSLFSVI 106
L++ L + L L VG +G G+YV G+ S+VI + I + T LF+VI
Sbjct: 86 LSKDLSVRHLLTLAVGGAIGTGLYVNTGAALSTGGPASLVIDWVIIS-TCLFTVI 139
>sp|Q08986|SAM3_YEAST S-adenosylmethionine permease SAM3 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SAM3 PE=1 SV=1
Length = 587
Score = 32.0 bits (71), Expect = 1.2, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 33/54 (61%), Gaps = 4/54 (7%)
Query: 54 RVLGLIDLTMLGVGATLGVGVYV-LAGSVARNQAGPSVVISFAIAAVTSLFSVI 106
+VL LTM+ +G TLG G+++ L S+A +GP+ ++ + TS+F V+
Sbjct: 75 KVLSQRHLTMIAIGGTLGTGLFIGLGYSLA---SGPAALLIGFLLVGTSMFCVV 125
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.137 0.372
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,030,256
Number of Sequences: 539616
Number of extensions: 1607243
Number of successful extensions: 4762
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 4699
Number of HSP's gapped (non-prelim): 87
length of query: 108
length of database: 191,569,459
effective HSP length: 76
effective length of query: 32
effective length of database: 150,558,643
effective search space: 4817876576
effective search space used: 4817876576
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)