BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6065
(316 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q32L63|VTA1_BOVIN Vacuolar protein sorting-associated protein VTA1 homolog OS=Bos
taurus GN=VTA1 PE=2 SV=1
Length = 307
Score = 232 bits (591), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 127/312 (40%), Positives = 178/312 (57%), Gaps = 12/312 (3%)
Query: 5 LPPCPDSLKAIQHFLNVASEHDNRDLTVSYWCRLHALQKALKIDKSSDGAKMLLLKLMDW 64
LPP P K+IQH L A EHD RD V+Y+CRL+A+Q +KID + + L +LMD
Sbjct: 7 LPPLPPQFKSIQHHLRTAQEHDKRDPVVAYYCRLYAMQTGMKIDSKTPECRKFLSRLMDQ 66
Query: 65 LEQEKKTHRDNDTIMNETAAQAYIENYALKLFQWADSMDRASTFNKNVVKAFYTASILMD 124
LE KK DN+ I E A++ENYALK+F +AD+ DRA F+KN++K+FYTAS+L+D
Sbjct: 67 LEALKKQLGDNEAITQEIVGSAHLENYALKMFLYADNEDRAGRFHKNMIKSFYTASLLID 126
Query: 125 VLQTFGETSEDIEQNKKYAKWKAAYIHNCLKSGETPIPGPPESGEGSEGPSLSSQNSNDQ 184
V+ FGE +++ +++KYA+WKA YIHNCLK+GETP GP E +
Sbjct: 127 VITVFGELTDENVKHRKYARWKATYIHNCLKNGETPQAGPVGIEEDNVDVEEYEDAGATS 186
Query: 185 LPSPPRENSNEDVTPS-FPAPTSSGGTLPSPPSMPQNLPGPSISGPLIPGPSIPSFPSPA 243
LP+ P + S+ PS P+ + +G +P P N P P S
Sbjct: 187 LPTQPLQPSSSTYDPSNMPSSSYTGIQIPPGAHAPANTPAEV--------PHSTGVTSNT 238
Query: 244 VTPSSPSTPAPQPAMPALVTQPEQEISYIEAELINKCQKYIKFASSALNYDDYKEAKSNL 303
+ P+ + PA PA+ + V+Q + ++ E + QKY K+A SAL Y+D A NL
Sbjct: 239 IQPTPQTIPAIDPALFSTVSQGDIRLT---PEDFARAQKYCKYAGSALQYEDVSTAVQNL 295
Query: 304 IKVLNILNTGRE 315
K L +L TGRE
Sbjct: 296 QKALKLLTTGRE 307
>sp|Q9CR26|VTA1_MOUSE Vacuolar protein sorting-associated protein VTA1 homolog OS=Mus
musculus GN=Vta1 PE=1 SV=1
Length = 309
Score = 224 bits (571), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 128/305 (41%), Positives = 173/305 (56%), Gaps = 10/305 (3%)
Query: 12 LKAIQHFLNVASEHDNRDLTVSYWCRLHALQKALKIDKSSDGAKMLLLKLMDWLEQEKKT 71
K+IQH L A EHD RD V+Y+CRL+A+Q +KID + + L KLMD LE KK
Sbjct: 14 FKSIQHHLRTAQEHDKRDPVVAYYCRLYAMQTGMKIDSKTPECRKFLSKLMDQLEALKKQ 73
Query: 72 HRDNDTIMNETAAQAYIENYALKLFQWADSMDRASTFNKNVVKAFYTASILMDVLQTFGE 131
DN+ + E A++ENYALK+F +AD+ DRA F+KN++K+FYTAS+L+DV+ FGE
Sbjct: 74 LGDNEAVTQEIVGCAHLENYALKMFLYADNEDRAGRFHKNMIKSFYTASLLIDVITVFGE 133
Query: 132 TSEDIEQNKKYAKWKAAYIHNCLKSGETPIPGPPESGEGSEGPSLSSQNSNDQLPSPPRE 191
+++ +++KYA+WKA YIHNCLK+GETP GP E ++ + PP+
Sbjct: 134 LTDENVKHRKYARWKATYIHNCLKNGETPQAGPVGIEEENDVEENEDVGATSLPTQPPQP 193
Query: 192 NSNEDVTPSFPAPTS-SGGTLPSPPSMPQNLPGPSISGPLIPGPSIPSFPSPAVTPSSPS 250
+S+ PS AP S SG +P P N P P S AV PS +
Sbjct: 194 SSSSAYDPSNLAPGSYSGIQIPPGAHAPANTPAEV--------PHSTGVTSNAVQPSPQT 245
Query: 251 TPAPQPAMPALVTQPEQEISYIEAELINKCQKYIKFASSALNYDDYKEAKSNLIKVLNIL 310
PA P L T + +I + E + QKY K+A SAL Y+D A NL K L +L
Sbjct: 246 VPAAPAVDPDLYTASQGDIR-LTPEDFARAQKYCKYAGSALQYEDVGTAVQNLQKALRLL 304
Query: 311 NTGRE 315
TGRE
Sbjct: 305 TTGRE 309
>sp|Q9NP79|VTA1_HUMAN Vacuolar protein sorting-associated protein VTA1 homolog OS=Homo
sapiens GN=VTA1 PE=1 SV=1
Length = 307
Score = 218 bits (555), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 121/305 (39%), Positives = 172/305 (56%), Gaps = 12/305 (3%)
Query: 12 LKAIQHFLNVASEHDNRDLTVSYWCRLHALQKALKIDKSSDGAKMLLLKLMDWLEQEKKT 71
K+IQH L A EHD RD V+Y+CRL+A+Q +KID + + L KLMD LE KK
Sbjct: 14 FKSIQHHLRTAQEHDKRDPVVAYYCRLYAMQTGMKIDSKTPECRKFLSKLMDQLEALKKQ 73
Query: 72 HRDNDTIMNETAAQAYIENYALKLFQWADSMDRASTFNKNVVKAFYTASILMDVLQTFGE 131
DN+ I E A++ENYALK+F +AD+ DRA F+KN++K+FYTAS+L+DV+ FGE
Sbjct: 74 LGDNEAITQEIVGCAHLENYALKMFLYADNEDRAGRFHKNMIKSFYTASLLIDVITVFGE 133
Query: 132 TSEDIEQNKKYAKWKAAYIHNCLKSGETPIPGPPESGEGSEGPSLSSQNSNDQLPSPPRE 191
+++ +++KYA+WKA YIHNCLK+GETP GP E ++ + P +
Sbjct: 134 LTDENVKHRKYARWKATYIHNCLKNGETPQAGPVGIEEDNDIEENEDAGAASLPTQPTQP 193
Query: 192 NSNEDVTPS-FPAPTSSGGTLPSPPSMPQNLPGPSISGPLIPGPSIPSFPSPAVTPSSPS 250
+S+ PS P+ +G +P P N P P S + P+ +
Sbjct: 194 SSSSTYDPSNMPSGNYTGIQIPPGAHAPANTPAEV--------PHSTGVASNTIQPTPQT 245
Query: 251 TPAPQPAMPALVTQPEQEISYIEAELINKCQKYIKFASSALNYDDYKEAKSNLIKVLNIL 310
PA PA+ ++Q + ++ E + QKY K+A SAL Y+D A NL K L +L
Sbjct: 246 IPAIDPALFNTISQGDVRLT---PEDFARAQKYCKYAGSALQYEDVSTAVQNLQKALKLL 302
Query: 311 NTGRE 315
TGRE
Sbjct: 303 TTGRE 307
>sp|Q5R5W5|VTA1_PONAB Vacuolar protein sorting-associated protein VTA1 homolog OS=Pongo
abelii GN=VTA1 PE=2 SV=1
Length = 307
Score = 217 bits (552), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 121/305 (39%), Positives = 172/305 (56%), Gaps = 12/305 (3%)
Query: 12 LKAIQHFLNVASEHDNRDLTVSYWCRLHALQKALKIDKSSDGAKMLLLKLMDWLEQEKKT 71
K+IQH L A EHD RD V+Y+CRL+A+Q +KID + + L KLMD LE KK
Sbjct: 14 FKSIQHHLRTAQEHDKRDPVVAYYCRLYAMQTGMKIDSKTPECRKFLSKLMDQLEALKKQ 73
Query: 72 HRDNDTIMNETAAQAYIENYALKLFQWADSMDRASTFNKNVVKAFYTASILMDVLQTFGE 131
DN+ I E A++ENYALK+F +AD+ DRA F+KN++K+FYTAS+L+DV+ FGE
Sbjct: 74 LGDNEAITQEIVGCAHLENYALKMFLYADNEDRAGRFHKNMIKSFYTASLLIDVITVFGE 133
Query: 132 TSEDIEQNKKYAKWKAAYIHNCLKSGETPIPGPPESGEGSEGPSLSSQNSNDQLPSPPRE 191
+++ +++KYA+WKA YIHNCLK+GETP GP E ++ + P +
Sbjct: 134 LTDENVKHRKYARWKATYIHNCLKNGETPQAGPVGIEEDNDVEENEDAGAASLPTQPTQP 193
Query: 192 NSNEDVTPS-FPAPTSSGGTLPSPPSMPQNLPGPSISGPLIPGPSIPSFPSPAVTPSSPS 250
+S+ PS P+ +G +P P N P P S + P+ +
Sbjct: 194 SSSSTYDPSNMPSGNYTGIQIPPGAHAPANTPAEV--------PHSTGVASNTIQPTPQT 245
Query: 251 TPAPQPAMPALVTQPEQEISYIEAELINKCQKYIKFASSALNYDDYKEAKSNLIKVLNIL 310
PA PA+ ++Q + ++ E + QKY K+A SAL Y+D A NL K L +L
Sbjct: 246 IPAIDPALFNTISQGDIRLT---PEDFARAQKYCKYAGSALQYEDVSTAVQNLQKALKLL 302
Query: 311 NTGRE 315
TGRE
Sbjct: 303 TTGRE 307
>sp|Q55B11|VTA1_DICDI Vacuolar protein sorting-associated protein VTA1 homolog
OS=Dictyostelium discoideum GN=vta1 PE=3 SV=1
Length = 550
Score = 105 bits (261), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 97/184 (52%), Gaps = 2/184 (1%)
Query: 3 IQLPPCPDSLKAIQHFLNVASEHDNRDLTVSYWCRLHALQKALKI-DKSSDGAKMLLLKL 61
+ L P +LK I +L + + + DL ++Y+CR+HA+Q A+ I K L + +
Sbjct: 1 MDLASLPPALKPIIPYLKQSQQLEKHDLLMAYYCRVHAIQMAMDIKQKMGASGSFLSIPI 60
Query: 62 MDWLEQEKKTHRDNDTIMNETAAQAYIENYALKLFQWADSMDRASTFNKNVVKAFYTASI 121
+ L+Q + ++E Y+E +A+K F +AD+ DRA NK FY+A +
Sbjct: 61 VKILDQGDADKAKLGSRLDEEDEAKYVEAFAMKAFSFADTQDRAGKANKATSTTFYSAFL 120
Query: 122 LMDVLQTFGETSEDIEQNKKYAKWKAAYIHNCLKSGETPIPGPPESGEGSEGPSLSSQNS 181
+VL+ GE SE+++ KKYA W++ I+ +K+G P P PP + EG +
Sbjct: 121 FFNVLEHMGEVSEEVKLKKKYASWRSVDINTAIKNGVAPSP-PPSIDQNEEGGASGETEE 179
Query: 182 NDQL 185
+ QL
Sbjct: 180 DAQL 183
>sp|O13703|VTA1_SCHPO Vacuolar protein sorting-associated protein vts1
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=vts1 PE=3 SV=2
Length = 389
Score = 72.4 bits (176), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 106/209 (50%), Gaps = 14/209 (6%)
Query: 3 IQLPPCPDSLKAIQHFLNVASEHDNRDLTVSYWCRLHALQKALKIDKS-SDGAKMLLLKL 61
IQ+ P L++IQ F+ +E + + ++YW A Q AL S+ K LL L
Sbjct: 2 IQIDTIPKELQSIQPFVRRFNELEAHNPVIAYWSLYWAAQMALSSSHGVSNECKDFLLSL 61
Query: 62 MDWLEQEKKTHRDNDTIMNETAAQAYIENYALKLFQWADSMDRASTFNKNVVKAFYTASI 121
++ LE +K +N+ + +ET+A+AY+E+++L++ A +R S K V+A+ A
Sbjct: 62 IEHLEDLRKNLGENENVSDETSAKAYVESFSLEVLVQA---ERNSKNGKPDVQAYLAARD 118
Query: 122 LMDVLQTFGETSEDIEQNKKYAKWKAAYIHNCLKSGETPIPGPPESGEGSEGPSLSSQNS 181
+++ + +G +E I ++ K+ K +A + N + +TP S +E SS NS
Sbjct: 119 FLELSRIWGPPTEQITKSIKFCKLRALQVANPQRKAKTP------SNHATEELQQSSTNS 172
Query: 182 NDQLPSPP---RENSNEDVTPSFPAPTSS 207
LP+ N++ SF PT+S
Sbjct: 173 TT-LPTQEAAVETNASASHETSFALPTTS 200
>sp|Q9AUE0|CALS1_ARATH Callose synthase 1 OS=Arabidopsis thaliana GN=CALS1 PE=1 SV=2
Length = 1950
Score = 65.5 bits (158), Expect = 5e-10, Method: Composition-based stats.
Identities = 45/135 (33%), Positives = 71/135 (52%), Gaps = 12/135 (8%)
Query: 9 PDSLKAIQHFLNVASEHDNRDLTVSYWCRLHALQKALKIDKSSDGAKMLLLK--LMDWLE 66
P SL I L VA+E + + V+Y CR +A +KA ++D +S G + K L+ LE
Sbjct: 36 PSSLVEIAPILRVANEVEASNPRVAYLCRFYAFEKAHRLDPTSSGRGVRQFKTALLQRLE 95
Query: 67 QEKKT----HRDNDTIMNETAAQAYIENYALKLFQWADSMDRASTFNKNVVKAFYTASIL 122
+E +T + +D ++ Q Y + Y L AD DRA + KA+ TA++L
Sbjct: 96 RENETTLAGRQKSDAREMQSFYQHYYKKYIQALLNAADKADRA-----QLTKAYQTAAVL 150
Query: 123 MDVLQTFGETSEDIE 137
+VL+ +T ED+E
Sbjct: 151 FEVLKAVNQT-EDVE 164
>sp|Q9SL03|CALS2_ARATH Callose synthase 2 OS=Arabidopsis thaliana GN=CALS2 PE=2 SV=3
Length = 1950
Score = 63.9 bits (154), Expect = 1e-09, Method: Composition-based stats.
Identities = 45/135 (33%), Positives = 71/135 (52%), Gaps = 12/135 (8%)
Query: 9 PDSLKAIQHFLNVASEHDNRDLTVSYWCRLHALQKALKIDKSSDGAKMLLLK--LMDWLE 66
P SL I L VA+E + + V+Y CR +A +KA ++D +S G + K L+ LE
Sbjct: 36 PSSLVEIAPILRVANEVEASNPRVAYLCRFYAFEKAHRLDPTSSGRGVRQFKTALLQRLE 95
Query: 67 QEKKT----HRDNDTIMNETAAQAYIENYALKLFQWADSMDRASTFNKNVVKAFYTASIL 122
+E +T + +D ++ Q Y + Y L AD DRA + KA+ TA++L
Sbjct: 96 RENETTLAGRQKSDAREMQSFYQHYYKKYIQALQNAADKADRA-----QLTKAYQTAAVL 150
Query: 123 MDVLQTFGETSEDIE 137
+VL+ +T ED+E
Sbjct: 151 FEVLKAVNQT-EDVE 164
>sp|Q9LYS6|CALS6_ARATH Putative callose synthase 6 OS=Arabidopsis thaliana GN=CALS6 PE=3
SV=2
Length = 1921
Score = 58.9 bits (141), Expect = 5e-08, Method: Composition-based stats.
Identities = 38/138 (27%), Positives = 72/138 (52%), Gaps = 6/138 (4%)
Query: 9 PDSLKAIQHFLNVASEHDNRDLTVSYWCRLHALQKALKIDKSSDGAKMLLLK--LMDWLE 66
P SL +I L VA+E + + V+Y CR HA +KA ++D +S G + K L+ LE
Sbjct: 44 PSSLASIAPILRVANEIEKDNPRVAYLCRFHAFEKAHRMDATSSGRGVRQFKTYLLHRLE 103
Query: 67 QEKKTHRDNDTIMNETAAQAYIENYALKLFQWADSMDRASTFNKNVVKAFYTASILMDVL 126
+E++ + + QAY +N+ K + ++ + + + + + AS+L DVL
Sbjct: 104 KEEEETKPQLAKNDPREIQAYYQNFYEKYIKEGETSRKP----EEMARLYQIASVLYDVL 159
Query: 127 QTFGETSEDIEQNKKYAK 144
+T + + + ++YA+
Sbjct: 160 KTVVPSPKVDYETRRYAE 177
>sp|Q9LXT9|CALS3_ARATH Callose synthase 3 OS=Arabidopsis thaliana GN=CALS3 PE=2 SV=3
Length = 1955
Score = 57.8 bits (138), Expect = 1e-07, Method: Composition-based stats.
Identities = 46/155 (29%), Positives = 73/155 (47%), Gaps = 18/155 (11%)
Query: 9 PDSLKAIQHFLNVASEHDNRDLTVSYWCRLHALQKALKIDKSSDGAKMLLLK--LMDWLE 66
P SL I L VA+E ++ + V+Y CR +A +KA ++D +S G + K L+ LE
Sbjct: 39 PSSLVEIAPILRVANEVESSNPRVAYLCRFYAFEKAHRLDPTSSGRGVRQFKTALLQRLE 98
Query: 67 QEKKTH-----RDNDTIMNETAAQAYIENYALKLFQWADSMDRASTFNKNVVKAFYTASI 121
+E + +D ++ Q Y + Y L AD DRA + KA+ TA++
Sbjct: 99 REHDPTLMGRVKKSDAREMQSFYQHYYKKYIQALHNAADKADRA-----QLTKAYQTANV 153
Query: 122 LMDVLQTFGETS------EDIEQNKKYAKWKAAYI 150
L +VL+ T E +E K A+ Y+
Sbjct: 154 LFEVLKAVNLTQSIEVDREILEAQDKVAEKTQLYV 188
>sp|Q3B724|CALS5_ARATH Callose synthase 5 OS=Arabidopsis thaliana GN=CALS5 PE=1 SV=1
Length = 1923
Score = 54.3 bits (129), Expect = 1e-06, Method: Composition-based stats.
Identities = 45/136 (33%), Positives = 66/136 (48%), Gaps = 14/136 (10%)
Query: 9 PDSLKAIQHFLNVASEHDNRDLTVSYWCRLHALQKALKIDKSSDGAKMLLLK--LMDWLE 66
P SL I L VA+E ++ V+Y CR +A +KA ++D SS G + K L LE
Sbjct: 38 PASLGTIAPILRVAAEIEHERPRVAYLCRFYAFEKAHRLDPSSGGRGVRQFKTLLFQRLE 97
Query: 67 QEKKTH-----RDNDTIMNETAAQAYIENYALKLFQWADSMDRASTFNKNVVKAFYTASI 121
++ + + D E+ Q Y E+Y L Q D DRA + KA+ TA +
Sbjct: 98 RDNASSLASRVKKTDGREVESFYQQYYEHYVRALDQ-GDQADRA-----QLGKAYQTAGV 151
Query: 122 LMDVLQTFGETSEDIE 137
L +VL + SE +E
Sbjct: 152 LFEVLMAVNK-SEKVE 166
>sp|Q9SHJ3|CALS7_ARATH Callose synthase 7 OS=Arabidopsis thaliana GN=CALS7 PE=2 SV=3
Length = 1958
Score = 45.4 bits (106), Expect = 5e-04, Method: Composition-based stats.
Identities = 39/142 (27%), Positives = 66/142 (46%), Gaps = 14/142 (9%)
Query: 9 PDSLKAIQHFLNVASEHDNRDLTVSYWCRLHALQKALKIDKSSDGAKM------LLLKLM 62
P SL +I L VA++ D + V+Y CR HA +KA ++D +S G + LL KL
Sbjct: 52 PSSLASIAPILRVANDIDQDNARVAYLCRFHAFEKAHRMDPTSSGRGVRQFKTYLLHKLE 111
Query: 63 DWLEQEKKTHRDNDTIMNETAAQAYIENYALKLFQWADSMDRASTFNKNVVKAFYTASIL 122
+ E + +D + Q + EN D + + + + K + A++L
Sbjct: 112 EEEEITEHMLAKSDPREIQLYYQTFYEN------NIQDGEGKKTP--EEMAKLYQIATVL 163
Query: 123 MDVLQTFGETSEDIEQNKKYAK 144
DVL+T + ++ +YAK
Sbjct: 164 YDVLKTVVPQARIDDKTLRYAK 185
>sp|Q8R4X3|RBM12_MOUSE RNA-binding protein 12 OS=Mus musculus GN=Rbm12 PE=1 SV=3
Length = 992
Score = 38.1 bits (87), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 27/45 (60%), Gaps = 5/45 (11%)
Query: 199 PSFPAPTSSGGTLPSP----PSMPQ-NLPGPSISGPLIPGPSIPS 238
P+ P P G +P P P+MP +PGP+I GP IPGP+IP
Sbjct: 715 PAMPGPAMPGPAMPGPAMPGPAMPGPAMPGPAIPGPAIPGPAIPG 759
Score = 34.7 bits (78), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 28/43 (65%), Gaps = 3/43 (6%)
Query: 221 LPGPSISGPLIPGPSI--PSFPSPAV-TPSSPSTPAPQPAMPA 260
+PGP++ GP +PGP++ P+ P PA+ P+ P P PA+P
Sbjct: 712 MPGPAMPGPAMPGPAMPGPAMPGPAMPGPAMPGPAIPGPAIPG 754
>sp|P0CR71|SPT5_CRYNB Transcription elongation factor SPT5 OS=Cryptococcus neoformans
var. neoformans serotype D (strain B-3501A) GN=SPT5 PE=3
SV=1
Length = 1152
Score = 34.3 bits (77), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 40/73 (54%), Gaps = 9/73 (12%)
Query: 198 TPSFPA---PTSSGG--TLPSPPSMPQNLP--GPSISGPLIPGPSIPSFPSPAVTPSSPS 250
TP++ A P +SG ++ +PPS P + P P+ +G P P+IP P A TP
Sbjct: 914 TPAYGAYGRPEASGSRPSVMAPPSAPYSAPYSAPTPAGNGAPTPAIPGNPYTAPTPYGAP 973
Query: 251 TP--APQPAMPAL 261
TP AP P MP+L
Sbjct: 974 TPYAAPTPGMPSL 986
>sp|P0CR70|SPT5_CRYNJ Transcription elongation factor SPT5 OS=Cryptococcus neoformans
var. neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=SPT5 PE=3 SV=1
Length = 1152
Score = 34.3 bits (77), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 40/73 (54%), Gaps = 9/73 (12%)
Query: 198 TPSFPA---PTSSGG--TLPSPPSMPQNLP--GPSISGPLIPGPSIPSFPSPAVTPSSPS 250
TP++ A P +SG ++ +PPS P + P P+ +G P P+IP P A TP
Sbjct: 914 TPAYGAYGRPEASGSRPSVMAPPSAPYSAPYSAPTPAGNGAPTPAIPGNPYTAPTPYGAP 973
Query: 251 TP--APQPAMPAL 261
TP AP P MP+L
Sbjct: 974 TPYAAPTPGMPSL 986
>sp|Q9NZT2|OGFR_HUMAN Opioid growth factor receptor OS=Homo sapiens GN=OGFR PE=1 SV=3
Length = 677
Score = 32.3 bits (72), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 46/112 (41%), Gaps = 14/112 (12%)
Query: 161 IPGPPESGEGSEGPSLSSQNSNDQLPSPPRENSNEDVTPSFPAPTSSGGTLPSPPSMPQN 220
PGP +G + P+ S + P+ P + + P P +G P P
Sbjct: 521 TPGPSPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSE 580
Query: 221 LPGPSISGPLI------------PGPSIPSFPSPAVTPSSPSTPAPQPAMPA 260
PGPS +GP P P+ P+ PA +PS TP P+PA PA
Sbjct: 581 TPGPSPAGPTRDEPAESPSETPGPRPAGPAGDEPAESPS--ETPGPRPAGPA 630
Score = 32.0 bits (71), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 44/111 (39%), Gaps = 18/111 (16%)
Query: 166 ESGEGSEGPSLSSQNSNDQLPSP----PRENSNEDVTPSFPAPTSSGGTLPSPPSMPQNL 221
E EG GP + S + P P P + + P P +G P P
Sbjct: 502 EDTEGRTGPKEGTPGSPSETPGPSPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSET 561
Query: 222 PGPSISGPL----------IPGPS--IPSFPSPAVTPSSPSTPAPQPAMPA 260
PGP +GP PGPS P+ PA +PS TP P+PA PA
Sbjct: 562 PGPRPAGPAGDEPAESPSETPGPSPAGPTRDEPAESPS--ETPGPRPAGPA 610
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.310 0.128 0.375
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 130,104,121
Number of Sequences: 539616
Number of extensions: 6300871
Number of successful extensions: 53405
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 497
Number of HSP's successfully gapped in prelim test: 2251
Number of HSP's that attempted gapping in prelim test: 31460
Number of HSP's gapped (non-prelim): 13235
length of query: 316
length of database: 191,569,459
effective HSP length: 117
effective length of query: 199
effective length of database: 128,434,387
effective search space: 25558443013
effective search space used: 25558443013
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 61 (28.1 bits)