BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6066
(370 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q2TBQ5|RL7A_BOVIN 60S ribosomal protein L7a OS=Bos taurus GN=RPL7A PE=2 SV=3
Length = 266
Score = 263 bits (671), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 158/348 (45%), Positives = 191/348 (54%), Gaps = 98/348 (28%)
Query: 23 PLAVKKVEVKKVVNPLFEKKARNFGIGQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLK 82
P VKK E KKVVNPLFEK+ +NFGI
Sbjct: 16 PAVVKKQEAKKVVNPLFEKRPKNFGI---------------------------------- 41
Query: 83 VPPPVHQFTQAVDKQTGQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLKVPPPVHQFTQ 142
GQDIQPKRDL+RFVKWP+YIR+QRQ+A+L KRLKVPP ++QFTQ
Sbjct: 42 ----------------GQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQ 85
Query: 143 AVDKQTASQLFKFLEKYRPESWEAKKQRLKARAEKKIAKKEDTPTKKPNQIKQGTNTVTR 202
A+D+QTA+QL K KYRPE+ + KKQRL ARAEKK A K D PTK+P ++ G NTVT
Sbjct: 86 ALDRQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPTKRPPVLRAGVNTVTT 145
Query: 203 LVVKKKASLVIIAHDVDPIELFKFLEKYRPESWEAKKQRLKARAEKKIAKKEDTPTKKPN 262
LV KKA LV+IAHDVDPIEL FL + +K P
Sbjct: 146 LVENKKAQLVVIAHDVDPIELVVFLP--------------------ALCRKMGVPY---- 181
Query: 263 QIKQGTNTVTRLVVKKKASLVIIAHDVDPIELVLFLPALCRKMGIPYCIVDSSDKANLAK 322
I +G + RLV +K + V V+S DK+ LAK
Sbjct: 182 CIIKGKARLGRLVHRKTCTTVAFTQ------------------------VNSEDKSALAK 217
Query: 323 LIESVKVNFTDRYDEIRRQWGGGSLGSKSAARIAKLERAKAKELAQKV 370
L+E+++ N+ DRYDEIRR WGG LG KS ARIAKLE+AKAKELA K+
Sbjct: 218 LVEAIRTNYNDRYDEIRRHWGGNVLGPKSVARIAKLEKAKAKELATKL 265
>sp|P62425|RL7A_RAT 60S ribosomal protein L7a OS=Rattus norvegicus GN=Rpl7a PE=1 SV=2
Length = 266
Score = 262 bits (670), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 158/348 (45%), Positives = 190/348 (54%), Gaps = 98/348 (28%)
Query: 23 PLAVKKVEVKKVVNPLFEKKARNFGIGQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLK 82
P VKK E KKVVNPLFEK+ +NFGI
Sbjct: 16 PAVVKKQEAKKVVNPLFEKRPKNFGI---------------------------------- 41
Query: 83 VPPPVHQFTQAVDKQTGQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLKVPPPVHQFTQ 142
GQDIQPKRDL+RFVKWP+YIR+QRQ+A+L KRLKVPP ++QFTQ
Sbjct: 42 ----------------GQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQ 85
Query: 143 AVDKQTASQLFKFLEKYRPESWEAKKQRLKARAEKKIAKKEDTPTKKPNQIKQGTNTVTR 202
A+D+QTA+QL K KYRPE+ + KKQRL ARAEKK A K D PTK+P ++ G NTVT
Sbjct: 86 ALDRQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPTKRPPVLRAGVNTVTT 145
Query: 203 LVVKKKASLVIIAHDVDPIELFKFLEKYRPESWEAKKQRLKARAEKKIAKKEDTPTKKPN 262
LV KKA LV+IAHDVDPIEL FL + +K P
Sbjct: 146 LVENKKAQLVVIAHDVDPIELVVFLP--------------------ALCRKMGVPY---- 181
Query: 263 QIKQGTNTVTRLVVKKKASLVIIAHDVDPIELVLFLPALCRKMGIPYCIVDSSDKANLAK 322
I +G + RLV +K + V V+S DK LAK
Sbjct: 182 CIIKGKARLGRLVHRKTCTTVAFTQ------------------------VNSEDKGALAK 217
Query: 323 LIESVKVNFTDRYDEIRRQWGGGSLGSKSAARIAKLERAKAKELAQKV 370
L+E+++ N+ DRYDEIRR WGG LG KS ARIAKLE+AKAKELA K+
Sbjct: 218 LVEAIRTNYNDRYDEIRRHWGGNVLGPKSVARIAKLEKAKAKELATKL 265
>sp|Q4R5C2|RL7A_MACFA 60S ribosomal protein L7a OS=Macaca fascicularis GN=RPL7A PE=2 SV=1
Length = 266
Score = 262 bits (670), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 158/348 (45%), Positives = 190/348 (54%), Gaps = 98/348 (28%)
Query: 23 PLAVKKVEVKKVVNPLFEKKARNFGIGQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLK 82
P VKK E KKVVNPLFEK+ +NFGI
Sbjct: 16 PAVVKKQEAKKVVNPLFEKRPKNFGI---------------------------------- 41
Query: 83 VPPPVHQFTQAVDKQTGQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLKVPPPVHQFTQ 142
GQDIQPKRDL+RFVKWP+YIR+QRQ+A+L KRLKVPP ++QFTQ
Sbjct: 42 ----------------GQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQ 85
Query: 143 AVDKQTASQLFKFLEKYRPESWEAKKQRLKARAEKKIAKKEDTPTKKPNQIKQGTNTVTR 202
A+D+QTA+QL K KYRPE+ + KKQRL ARAEKK A K D PTK+P ++ G NTVT
Sbjct: 86 ALDRQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPTKRPPVLRAGVNTVTT 145
Query: 203 LVVKKKASLVIIAHDVDPIELFKFLEKYRPESWEAKKQRLKARAEKKIAKKEDTPTKKPN 262
LV KKA LV+IAHDVDPIEL FL + +K P
Sbjct: 146 LVENKKAQLVVIAHDVDPIELVVFLP--------------------ALCRKMGVPY---- 181
Query: 263 QIKQGTNTVTRLVVKKKASLVIIAHDVDPIELVLFLPALCRKMGIPYCIVDSSDKANLAK 322
I +G + RLV +K + V V+S DK LAK
Sbjct: 182 CIIKGKARLGRLVHRKTCTTVAFTQ------------------------VNSEDKGALAK 217
Query: 323 LIESVKVNFTDRYDEIRRQWGGGSLGSKSAARIAKLERAKAKELAQKV 370
L+E+++ N+ DRYDEIRR WGG LG KS ARIAKLE+AKAKELA K+
Sbjct: 218 LVEAIRTNYNDRYDEIRRHWGGNVLGPKSVARIAKLEKAKAKELATKL 265
>sp|P62424|RL7A_HUMAN 60S ribosomal protein L7a OS=Homo sapiens GN=RPL7A PE=1 SV=2
Length = 266
Score = 262 bits (670), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 158/348 (45%), Positives = 190/348 (54%), Gaps = 98/348 (28%)
Query: 23 PLAVKKVEVKKVVNPLFEKKARNFGIGQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLK 82
P VKK E KKVVNPLFEK+ +NFGI
Sbjct: 16 PAVVKKQEAKKVVNPLFEKRPKNFGI---------------------------------- 41
Query: 83 VPPPVHQFTQAVDKQTGQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLKVPPPVHQFTQ 142
GQDIQPKRDL+RFVKWP+YIR+QRQ+A+L KRLKVPP ++QFTQ
Sbjct: 42 ----------------GQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQ 85
Query: 143 AVDKQTASQLFKFLEKYRPESWEAKKQRLKARAEKKIAKKEDTPTKKPNQIKQGTNTVTR 202
A+D+QTA+QL K KYRPE+ + KKQRL ARAEKK A K D PTK+P ++ G NTVT
Sbjct: 86 ALDRQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPTKRPPVLRAGVNTVTT 145
Query: 203 LVVKKKASLVIIAHDVDPIELFKFLEKYRPESWEAKKQRLKARAEKKIAKKEDTPTKKPN 262
LV KKA LV+IAHDVDPIEL FL + +K P
Sbjct: 146 LVENKKAQLVVIAHDVDPIELVVFLP--------------------ALCRKMGVPY---- 181
Query: 263 QIKQGTNTVTRLVVKKKASLVIIAHDVDPIELVLFLPALCRKMGIPYCIVDSSDKANLAK 322
I +G + RLV +K + V V+S DK LAK
Sbjct: 182 CIIKGKARLGRLVHRKTCTTVAFTQ------------------------VNSEDKGALAK 217
Query: 323 LIESVKVNFTDRYDEIRRQWGGGSLGSKSAARIAKLERAKAKELAQKV 370
L+E+++ N+ DRYDEIRR WGG LG KS ARIAKLE+AKAKELA K+
Sbjct: 218 LVEAIRTNYNDRYDEIRRHWGGNVLGPKSVARIAKLEKAKAKELATKL 265
>sp|P12970|RL7A_MOUSE 60S ribosomal protein L7a OS=Mus musculus GN=Rpl7a PE=2 SV=2
Length = 266
Score = 261 bits (668), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 157/348 (45%), Positives = 190/348 (54%), Gaps = 98/348 (28%)
Query: 23 PLAVKKVEVKKVVNPLFEKKARNFGIGQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLK 82
P VKK E KKVVNPLFEK+ +NFGI
Sbjct: 16 PAVVKKQEAKKVVNPLFEKRPKNFGI---------------------------------- 41
Query: 83 VPPPVHQFTQAVDKQTGQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLKVPPPVHQFTQ 142
GQDIQPKRDL+RFVKWP+YIR+QRQ+A+L KRLKVPP ++QFTQ
Sbjct: 42 ----------------GQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQ 85
Query: 143 AVDKQTASQLFKFLEKYRPESWEAKKQRLKARAEKKIAKKEDTPTKKPNQIKQGTNTVTR 202
A+D+QTA+QL K KYRPE+ + KKQRL ARAEKK A K D PTK+P ++ G NTVT
Sbjct: 86 ALDRQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPTKRPPVLRAGVNTVTT 145
Query: 203 LVVKKKASLVIIAHDVDPIELFKFLEKYRPESWEAKKQRLKARAEKKIAKKEDTPTKKPN 262
LV KKA LV+IAHDVDPIEL FL + +K P
Sbjct: 146 LVENKKAQLVVIAHDVDPIELVVFLP--------------------ALCRKMGVPY---- 181
Query: 263 QIKQGTNTVTRLVVKKKASLVIIAHDVDPIELVLFLPALCRKMGIPYCIVDSSDKANLAK 322
++K KA L + H C + + V+S DK LAK
Sbjct: 182 -----------CIIKGKARLGHLVHR-----------KTC--TTVAFTQVNSEDKGALAK 217
Query: 323 LIESVKVNFTDRYDEIRRQWGGGSLGSKSAARIAKLERAKAKELAQKV 370
L+E+++ N+ DRYDEIRR WGG LG KS ARIAKLE+AKAKELA K+
Sbjct: 218 LVEAIRTNYNDRYDEIRRHWGGNVLGPKSVARIAKLEKAKAKELATKL 265
>sp|P32429|RL7A_CHICK 60S ribosomal protein L7a OS=Gallus gallus GN=RPL7A PE=2 SV=2
Length = 266
Score = 259 bits (661), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 156/348 (44%), Positives = 190/348 (54%), Gaps = 98/348 (28%)
Query: 23 PLAVKKVEVKKVVNPLFEKKARNFGIGQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLK 82
P VKK E KKVVNPLFEK+ +NFGI
Sbjct: 16 PAVVKKQEAKKVVNPLFEKRPKNFGI---------------------------------- 41
Query: 83 VPPPVHQFTQAVDKQTGQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLKVPPPVHQFTQ 142
GQDIQPKRDL+RFVKWP+YIR+QRQ+++L KRLKVPP ++QF+Q
Sbjct: 42 ----------------GQDIQPKRDLTRFVKWPRYIRLQRQRSILYKRLKVPPAINQFSQ 85
Query: 143 AVDKQTASQLFKFLEKYRPESWEAKKQRLKARAEKKIAKKEDTPTKKPNQIKQGTNTVTR 202
A+D+QTA+QL K KYRPE+ + KKQRL ARAE+K A K DTPTK+P ++ G NTVT
Sbjct: 86 ALDRQTATQLLKLAHKYRPETKQEKKQRLLARAEQKAAGKGDTPTKRPPVLRAGVNTVTT 145
Query: 203 LVVKKKASLVIIAHDVDPIELFKFLEKYRPESWEAKKQRLKARAEKKIAKKEDTPTKKPN 262
LV KKA LV+IAHDVDPIEL FL + +K P
Sbjct: 146 LVENKKAQLVVIAHDVDPIELVVFLP--------------------ALCRKMGVPY---- 181
Query: 263 QIKQGTNTVTRLVVKKKASLVIIAHDVDPIELVLFLPALCRKMGIPYCIVDSSDKANLAK 322
++K KA L + H C + + V+ DK LAK
Sbjct: 182 -----------CIIKSKARLGRLVHRKT---------CTC----VAFTQVNPEDKGALAK 217
Query: 323 LIESVKVNFTDRYDEIRRQWGGGSLGSKSAARIAKLERAKAKELAQKV 370
L+E+VK N+ DRYDEIRR WGG LG KS ARIAKLE+AKAKELA K+
Sbjct: 218 LVEAVKTNYNDRYDEIRRHWGGNVLGPKSVARIAKLEKAKAKELATKL 265
>sp|P46223|RL7A_DROME 60S ribosomal protein L7a OS=Drosophila melanogaster GN=RpL7A PE=2
SV=2
Length = 271
Score = 254 bits (650), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 162/350 (46%), Positives = 198/350 (56%), Gaps = 98/350 (28%)
Query: 20 APAPLAVKKVEVKKVVNPLFEKKARNFGIGQDIQPKRDLSRFVKWPKYIRIQRQKAVLQK 79
APAPLAVKK VKKVVN LFEK+ +NFGI
Sbjct: 18 APAPLAVKKPVVKKVVNQLFEKRPKNFGI------------------------------- 46
Query: 80 RLKVPPPVHQFTQAVDKQTGQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLKVPPPVHQ 139
GQ++QPKRDLSRFV+WPKYIR+QRQKAVLQKRLKVPPP+HQ
Sbjct: 47 -------------------GQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQ 87
Query: 140 FTQAVDKQTASQLFKFLEKYRPESWEAKKQRLKARAEKKIAKKEDTPTKKPNQIKQGTNT 199
F+Q +DK TA +LFK LEKYRPES AKK RLK AE K K+ P KKP+ + GTNT
Sbjct: 88 FSQTLDKTTAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPSYVSAGTNT 147
Query: 200 VTRLVVKKKASLVIIAHDVDPIELFKFLEKYRPESWEAKKQRLKARAEKKIAKKEDTPTK 259
VT+L+ +KKA LV+IAHDVDP+EL FL + +K P
Sbjct: 148 VTKLIEQKKAQLVVIAHDVDPLELVLFLP--------------------ALCRKMGVPY- 186
Query: 260 KPNQIKQGTNTVTRLVVKKKASLVIIAHDVDPIELVLFLPALCRKMGIPYCIVDSSDKAN 319
I +G + RLV +K + + + VD++DKAN
Sbjct: 187 ---CIVKGKARLGRLVRRKTCTTLALT------------------------TVDNNDKAN 219
Query: 320 LAKLIESVKVNFTDRYDEIRRQWGGGSLGSKSAARIAKLERAKAKELAQK 369
K++E+VK NF +R++EIRR WGGG LGSKS ARI+KLERAKA+ELAQK
Sbjct: 220 FGKVLEAVKTNFNERHEEIRRHWGGGILGSKSLARISKLERAKARELAQK 269
>sp|O57592|RL7A_TAKRU 60S ribosomal protein L7a OS=Takifugu rubripes GN=rpl7a PE=3 SV=3
Length = 266
Score = 253 bits (647), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 152/348 (43%), Positives = 188/348 (54%), Gaps = 98/348 (28%)
Query: 23 PLAVKKVEVKKVVNPLFEKKARNFGIGQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLK 82
P KK E KKVVNPLFEK+ +NFGI
Sbjct: 16 PSVAKKHEAKKVVNPLFEKRPKNFGI---------------------------------- 41
Query: 83 VPPPVHQFTQAVDKQTGQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLKVPPPVHQFTQ 142
GQDIQPKRDL+RFVKWP+YIR+QRQ+++L KRLKVPP ++QFTQ
Sbjct: 42 ----------------GQDIQPKRDLTRFVKWPRYIRLQRQRSILYKRLKVPPAINQFTQ 85
Query: 143 AVDKQTASQLFKFLEKYRPESWEAKKQRLKARAEKKIAKKEDTPTKKPNQIKQGTNTVTR 202
A+D+QTA+QLFK KYRPE+ + KK+RL ARAE+K A K D PTK+P ++ G NT+T
Sbjct: 86 ALDRQTATQLFKLAHKYRPETKQEKKKRLLARAEQKAAGKGDAPTKRPPVLRAGVNTITS 145
Query: 203 LVVKKKASLVIIAHDVDPIELFKFLEKYRPESWEAKKQRLKARAEKKIAKKEDTPTKKPN 262
LV KKA LV+IAHDVDPIEL FL + +K P
Sbjct: 146 LVENKKAQLVVIAHDVDPIELVIFLP--------------------ALCRKMGVPY---- 181
Query: 263 QIKQGTNTVTRLVVKKKASLVIIAHDVDPIELVLFLPALCRKMGIPYCIVDSSDKANLAK 322
+VK KA L + H C + + + DK LAK
Sbjct: 182 -----------CIVKGKARLGRLVHR-----------KTC--TSVAFTQTNPEDKGALAK 217
Query: 323 LIESVKVNFTDRYDEIRRQWGGGSLGSKSAARIAKLERAKAKELAQKV 370
L+E++K N+ DRY+EIRR WGGG LG KS ARI KLE+AKAKELA K+
Sbjct: 218 LVEAIKTNYNDRYEEIRRHWGGGILGPKSTARINKLEKAKAKELATKL 265
>sp|Q90YW2|RL7A_ICTPU 60S ribosomal protein L7a OS=Ictalurus punctatus GN=rpl7a PE=2 SV=3
Length = 266
Score = 251 bits (642), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 151/350 (43%), Positives = 187/350 (53%), Gaps = 102/350 (29%)
Query: 23 PLAVKKVEVKKVVNPLFEKKARNFGIGQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLK 82
P KK EVKKVVNPLFEK+ +NFGI
Sbjct: 16 PSVAKKHEVKKVVNPLFEKRPKNFGI---------------------------------- 41
Query: 83 VPPPVHQFTQAVDKQTGQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLKVPPPVHQFTQ 142
GQDIQPKRDL+RFVKWP+Y+R+QR ++L KRLKVPP ++QF Q
Sbjct: 42 ----------------GQDIQPKRDLTRFVKWPRYVRLQRHGSILYKRLKVPPAINQFNQ 85
Query: 143 AVDKQTASQLFKFLEKYRPESWEAKKQRLKARAEKKIAKKEDTPTKKPNQIKQGTNTVTR 202
A+D+QTA+QLFK KYRPE+ + KK+RL ARAE+K A K D PTK+P ++ G NTVT
Sbjct: 86 ALDRQTATQLFKLAHKYRPETKQEKKRRLLARAEQKAAGKGDVPTKRPPVVRAGVNTVTS 145
Query: 203 LVVKKKASLVIIAHDVDPIELFKFLEKYRPESWEAKKQRLKARAEKKIAKKEDTPTKKPN 262
LV KKA LV+IAHDVDPIEL FL + +K P
Sbjct: 146 LVESKKAQLVVIAHDVDPIELVLFLP--------------------ALCRKMGVPY---- 181
Query: 263 QIKQGTNTVTRLVVKKKASLVIIAHDVDPIELVLFLPALCRKMGIPYCIVDSS--DKANL 320
+VK KA L + H RK C ++ D+A L
Sbjct: 182 -----------CIVKGKARLGRLVH---------------RKTCTSVCFTQTNPEDRAAL 215
Query: 321 AKLIESVKVNFTDRYDEIRRQWGGGSLGSKSAARIAKLERAKAKELAQKV 370
AKL+E++K N+ DRY+EIRR WGG +G KS ARIAKLE+AK KELA K+
Sbjct: 216 AKLVEAIKTNYNDRYEEIRRHWGGNIMGPKSTARIAKLEKAKGKELATKL 265
>sp|O76732|RL7A_ANOGA 60S ribosomal protein L7a OS=Anopheles gambiae GN=RpL7A PE=3 SV=2
Length = 271
Score = 233 bits (593), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 150/351 (42%), Positives = 194/351 (55%), Gaps = 99/351 (28%)
Query: 20 APAPLAVKKVEVKKVV-NPLFEKKARNFGIGQDIQPKRDLSRFVKWPKYIRIQRQKAVLQ 78
APAPLA K K V NPLFEK+ +N+GIGQ++QPKRDLSRFVKWPKYIRIQR +A+LQ
Sbjct: 18 APAPLAKPKKVEVKKVVNPLFEKRVKNYGIGQNVQPKRDLSRFVKWPKYIRIQRHRAILQ 77
Query: 79 KRLKVPPPVHQFTQAVDKQTGQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLKVPPPVH 138
KRLK+PPP++QFTQ +DK T Q
Sbjct: 78 KRLKIPPPINQFTQTLDKPTAQ-------------------------------------- 99
Query: 139 QFTQAVDKQTASQLFKFLEKYRPESWEAKKQRLKARAEKKIAKKEDTPTKKPNQIKQGTN 198
Q+ K LEKYRPE+ A+ QRLKA+AE K A KE+ P+K+ NQ++QG N
Sbjct: 100 ------------QVMKMLEKYRPENPIARVQRLKAKAEAKAAGKEEPPSKRANQLRQGIN 147
Query: 199 TVTRLVVKKKASLVIIAHDVDPIELFKFLEKYRPESWEAKKQRLKARAEKKIAKKEDTPT 258
+V ++V +KKA LVIIAHDVDPIEL +L + +K P
Sbjct: 148 SVVKMVEQKKAQLVIIAHDVDPIELVVYLP--------------------ALCRKMGVPY 187
Query: 259 KKPNQIKQGTNTVTRLVVKKKASLVIIAHDVDPIELVLFLPALCRKMGIPYCIVDSSDKA 318
I +G + LV +K + V + V+++DK
Sbjct: 188 ----CIIKGKARLGTLVYRKTCTCVALTQ------------------------VENADKP 219
Query: 319 NLAKLIESVKVNFTDRYDEIRRQWGGGSLGSKSAARIAKLERAKAKELAQK 369
NLAKL+E++K NF DR+D+IRR WGGG LG KS AR+AKLE+AK +E+ QK
Sbjct: 220 NLAKLVETIKTNFNDRFDDIRRHWGGGLLGPKSMARLAKLEKAKKREMLQK 270
>sp|Q966C6|RL7A_CAEEL 60S ribosomal protein L7a OS=Caenorhabditis elegans GN=rpl-7A PE=1
SV=3
Length = 265
Score = 203 bits (516), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 131/339 (38%), Positives = 181/339 (53%), Gaps = 102/339 (30%)
Query: 32 KKVVNPLFEKKARNFGIGQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLKVPPPVHQFT 91
K+V NPLFEK+ARNF IGQDIQPK+D++RFVKWPKYIR+QRQ A+LQKRLKVPP ++QF
Sbjct: 26 KEVKNPLFEKRARNFNIGQDIQPKKDVTRFVKWPKYIRLQRQSAILQKRLKVPPTINQFR 85
Query: 92 QAVDKQTGQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLKVPPPVHQFTQAVDKQTASQ 151
A+D Q +A Q
Sbjct: 86 TALDSQ--------------------------------------------------SARQ 95
Query: 152 LFKFLEKYRPESWEAKKQRLKARAEKKIAKKEDTPTKKPNQIKQGTNTVTRLVVKKKASL 211
FK L+KYRPES EAKK RL+ARAE + A K++ TK+PN ++ G NT+TRLV ++A L
Sbjct: 96 AFKLLDKYRPESTEAKKNRLRARAEARAAGKKEEVTKRPNTVRHGVNTITRLVETRRAQL 155
Query: 212 VIIAHDVDPIELFKFLEKYRPESWEAKKQRLKARAEKKIAKKEDTPTKKPNQIKQGTNTV 271
V+IAHDV+P+E+ L + +K + P
Sbjct: 156 VLIAHDVNPLEIVLHLP--------------------ALCRKYNVPYA------------ 183
Query: 272 TRLVVKKKASLVIIAHDVDPIELVLFLPALCRKMGIPYCIVDSS--DKANLAKLIESVKV 329
++K KASL + RK +VD + DK+ L KL+E+V
Sbjct: 184 ---IIKGKASLGTVVR---------------RKTTAAVALVDVNPEDKSALNKLVETVNN 225
Query: 330 NFTDRYDEIRRQWGGGSLGSKSAARIAKLERAKAKELAQ 368
NF++R++EIR+ WGGG + +KS A+ K+ERA+A++L +
Sbjct: 226 NFSERHEEIRKHWGGGVMSAKSDAKKLKIERARARDLGK 264
>sp|P35685|RL7A_ORYSJ 60S ribosomal protein L7a OS=Oryza sativa subsp. japonica GN=RPL7A
PE=2 SV=1
Length = 258
Score = 182 bits (461), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 127/351 (36%), Positives = 171/351 (48%), Gaps = 102/351 (29%)
Query: 20 APAPLAVKKVEVKKVVNPLFEKKARNFGIGQDIQPKRDLSRFVKWPKYIRIQRQKAVLQK 79
AP P A KK E KV NPLFEK+ + FGI
Sbjct: 9 APVP-AKKKTE--KVTNPLFEKRPKQFGI------------------------------- 34
Query: 80 RLKVPPPVHQFTQAVDKQTGQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLKVPPPVHQ 139
G + PK+DL RFVKWPK +RIQRQ+ +L++RLKVPP ++Q
Sbjct: 35 -------------------GGALPPKKDLHRFVKWPKVVRIQRQRRILKQRLKVPPALNQ 75
Query: 140 FTQAVDKQTASQLFKFLEKYRPESWEAKKQRLKARAEKKIAKKEDTPTKKPNQIKQGTNT 199
FT+ +DK A+ LFK L KYRPE AKK+RL RA+ + A+ + KKP +K G N
Sbjct: 76 FTRTLDKNLATNLFKMLLKYRPEDKAAKKERLLKRAQAE-AEGKTVEAKKPIVVKYGLNH 134
Query: 200 VTRLVVKKKASLVIIAHDVDPIELFKFLEKYRPESWEAKKQRLKARAEKKIAKKEDTPTK 259
VT L+ + KA LV+IAHDVDPIEL +L + +K + P
Sbjct: 135 VTYLIEQSKAQLVVIAHDVDPIELVVWLP--------------------ALCRKMEVPY- 173
Query: 260 KPNQIKQGTNTVTRLVVKKKASLVIIAHDVDPIELVLFLPALCRKMGIPYCIVDSSDKAN 319
+VK KA L I H L L V + DK
Sbjct: 174 --------------CIVKGKARLGSIVHKKTASVLCL-------------TTVKNEDKLE 206
Query: 320 LAKLIESVKVNFTDRYDEIRRQWGGGSLGSKSAARIAKLERAKAKELAQKV 370
+K++E++K NF D++DE+R++WGGG +GSKS A+ E+ AKE AQ++
Sbjct: 207 FSKILEAIKANFNDKFDEVRKKWGGGVMGSKSQAKTKAREKLLAKEAAQRM 257
>sp|O13672|RL8_SCHPO 60S ribosomal protein L8 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=rpl8 PE=1 SV=3
Length = 259
Score = 180 bits (456), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 125/338 (36%), Positives = 155/338 (45%), Gaps = 100/338 (29%)
Query: 15 KSKKVAPAPLAVKKVEVKKVVNPLFEKKARNFGIGQDIQPKRDLSRFVKWPKYIRIQRQK 74
KSKKVAP+P A K K NPLF + R+FGI
Sbjct: 4 KSKKVAPSPFAQPKA-AKTTKNPLFVSRPRSFGI-------------------------- 36
Query: 75 AVLQKRLKVPPPVHQFTQAVDKQTGQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLKVP 134
GQDIQPKRDLSRFVKWP+YIR+QR++ +L RLKVP
Sbjct: 37 ------------------------GQDIQPKRDLSRFVKWPEYIRLQRRRKILNLRLKVP 72
Query: 135 PPVHQFTQAVDKQTASQLFKFLEKYRPESWEAKKQRLKARAEKKI-AKKEDTPTKKPNQI 193
P + QF + +DK TA+Q+FK L KYRPE+ KKQRL A AE K +KKP +
Sbjct: 73 PAIAQFQKTLDKNTATQVFKLLNKYRPETAAEKKQRLVAEAEAVANGKSAQDVSKKPYNV 132
Query: 194 KQGTNTVTRLVVKKKASLVIIAHDVDPIELFKFLEKYRPESWEAKKQRLKARAEKKIAKK 253
K G N V L+ KKA LV+IA DVDPIEL FL + KK
Sbjct: 133 KYGLNHVVALIEAKKAKLVLIASDVDPIELVVFLP--------------------ALCKK 172
Query: 254 EDTPTKKPNQIKQGTNTVTRLVVKKKASLVIIAHDVDPIELVLFLPALCRKMGIPYCIVD 313
P +VK KA L + H L + V
Sbjct: 173 MGVPYA---------------IVKNKARLGTVIHQKTAAVLAV-------------TEVR 204
Query: 314 SSDKANLAKLIESVKVNFTDRYDEIRRQWGGGSLGSKS 351
DK LA ++ +V NF+ +YDE RR+WGGG +G K+
Sbjct: 205 EEDKNELASIVSAVDANFSAKYDESRRKWGGGIMGGKT 242
>sp|Q9LZH9|RL7A2_ARATH 60S ribosomal protein L7a-2 OS=Arabidopsis thaliana GN=RPL7AB PE=1
SV=1
Length = 256
Score = 179 bits (453), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 110/274 (40%), Positives = 153/274 (55%), Gaps = 53/274 (19%)
Query: 99 GQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLKVPPPVHQFTQAVDKQTASQLFKFLEK 158
G + PK+DLSR++KWPK IR+QRQK +L++RLKVPP ++QFT+ +DK A+ LFK L K
Sbjct: 33 GGALPPKKDLSRYIKWPKSIRLQRQKRILKQRLKVPPALNQFTKTLDKNLATSLFKILLK 92
Query: 159 YRPESWEAKKQRL--KARAEKKIAKKEDTPTKKPNQIKQGTNTVTRLVVKKKASLVIIAH 216
YRPE AKK+RL KA+AE A+ + +KKP +K G N VT L+ + KA LV+IAH
Sbjct: 93 YRPEDKAAKKERLLNKAQAE---AEGKPAESKKPIVVKYGLNHVTYLIEQNKAQLVVIAH 149
Query: 217 DVDPIELFKFLEKYRPESWEAKKQRLKARAEKKIAKKEDTPTKKPNQIKQGTNTVTRLVV 276
DVDPIEL +L + +K + P +V
Sbjct: 150 DVDPIELVVWLP--------------------ALCRKMEVPY---------------CIV 174
Query: 277 KKKASLVIIAHDVDPIELVLFLPALCRKMGIPYCIVDSSDKANLAKLIESVKVNFTDRYD 336
K K+ L + H L L V + DK +K++E++K NF D+Y+
Sbjct: 175 KGKSRLGAVVHQKTAAALCL-------------TTVKNEDKLEFSKILEAIKANFNDKYE 221
Query: 337 EIRRQWGGGSLGSKSAARIAKLERAKAKELAQKV 370
E R++WGGG +GSKS A+ ER AKE AQ++
Sbjct: 222 EYRKKWGGGIMGSKSQAKTKAKERVIAKEAAQRM 255
>sp|P49692|RL7A1_ARATH 60S ribosomal protein L7a-1 OS=Arabidopsis thaliana GN=RPL7AA PE=1
SV=2
Length = 257
Score = 178 bits (451), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 110/274 (40%), Positives = 154/274 (56%), Gaps = 53/274 (19%)
Query: 99 GQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLKVPPPVHQFTQAVDKQTASQLFKFLEK 158
G + PK+DLSR++KWPK IR+QRQK +L++RLKVPP ++QFT+ +DK A+ LFK L K
Sbjct: 34 GGALPPKKDLSRYIKWPKSIRLQRQKRILKQRLKVPPALNQFTKTLDKNLATSLFKVLLK 93
Query: 159 YRPESWEAKKQRL--KARAEKKIAKKEDTPTKKPNQIKQGTNTVTRLVVKKKASLVIIAH 216
YRPE AKK+RL KA+AE A+ + + +KKP +K G N VT L+ + KA LV+IAH
Sbjct: 94 YRPEDKAAKKERLVKKAQAE---AEGKPSESKKPIVVKYGLNHVTYLIEQNKAQLVVIAH 150
Query: 217 DVDPIELFKFLEKYRPESWEAKKQRLKARAEKKIAKKEDTPTKKPNQIKQGTNTVTRLVV 276
DVDPIEL +L + +K + P +V
Sbjct: 151 DVDPIELVVWLP--------------------ALCRKMEVPY---------------CIV 175
Query: 277 KKKASLVIIAHDVDPIELVLFLPALCRKMGIPYCIVDSSDKANLAKLIESVKVNFTDRYD 336
K K+ L + H L L V + DK +K++E++K NF D+Y+
Sbjct: 176 KGKSRLGAVVHQKTASCLCL-------------TTVKNEDKLEFSKILEAIKANFNDKYE 222
Query: 337 EIRRQWGGGSLGSKSAARIAKLERAKAKELAQKV 370
E R++WGGG +GSKS A+ ER AKE AQ++
Sbjct: 223 EYRKKWGGGIMGSKSQAKTKAKERVIAKEAAQRM 256
>sp|P17076|RL8A_YEAST 60S ribosomal protein L8-A OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=RPL8A PE=1 SV=4
Length = 256
Score = 174 bits (440), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 121/356 (33%), Positives = 167/356 (46%), Gaps = 107/356 (30%)
Query: 16 SKKVAPAPLAVKKVEVKKVVNPLFEKKARNFGIGQDIQPKRDLSRFVKWPKYIRIQRQKA 75
KKVAPAP K + K NPL +NFGI
Sbjct: 4 GKKVAPAPFGAKSTKSNKTRNPLTHSTPKNFGI--------------------------- 36
Query: 76 VLQKRLKVPPPVHQFTQAVDKQTGQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLKVPP 135
GQ +QPKR+LSR+VKWP+Y+R+QRQK +L RLKVPP
Sbjct: 37 -----------------------GQAVQPKRNLSRYVKWPEYVRVQRQKKILSIRLKVPP 73
Query: 136 PVHQFTQAVDKQTASQLFKFLEKYRPESWEAKKQRLK----ARAEKKIAKKEDTPTKKPN 191
+ QF +D+ TA++ FK KYRPE+ KK+RL A AE K +K++ +P KP
Sbjct: 74 TIAQFQYTLDRNTAAETFKLFNKYRPETAAEKKERLTKEAAAVAEGK-SKQDASP--KPY 130
Query: 192 QIKQGTNTVTRLVVKKKASLVIIAHDVDPIELFKFLEKYRPESWEAKKQRLKARAEKKIA 251
+K G N V L+ KKA LV+IA+DVDPIEL FL +
Sbjct: 131 AVKYGLNHVVALIENKKAKLVLIANDVDPIELVVFLP--------------------ALC 170
Query: 252 KKEDTPTKKPNQIKQGTNTVTRLVVKKKASLVIIAHDVDPIELVLFLPALCRKMGIPYCI 311
KK P I +G + LV +K +++ +
Sbjct: 171 KKMGVPY----AIVKGKARLGTLVNQKTSAVAALTE------------------------ 202
Query: 312 VDSSDKANLAKLIESVKVNFTDRYDEIRRQWGGGSLGSKSAARIAKLERAKAKELA 367
V + D+A LAKL+ ++ NF D+YDE+++ WGGG LG+K+ A++ K RAK + A
Sbjct: 203 VRAEDEAALAKLVSTIDANFADKYDEVKKHWGGGILGNKAQAKMDK--RAKNSDSA 256
>sp|P29453|RL8B_YEAST 60S ribosomal protein L8-B OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=RPL8B PE=1 SV=3
Length = 256
Score = 173 bits (439), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 121/356 (33%), Positives = 167/356 (46%), Gaps = 107/356 (30%)
Query: 16 SKKVAPAPLAVKKVEVKKVVNPLFEKKARNFGIGQDIQPKRDLSRFVKWPKYIRIQRQKA 75
KKVAPAP K + K NPL +NFGI
Sbjct: 4 GKKVAPAPFGAKSTKSNKAKNPLTHSTPKNFGI--------------------------- 36
Query: 76 VLQKRLKVPPPVHQFTQAVDKQTGQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLKVPP 135
GQ +QPKR+LSR+VKWP+Y+R+QRQK +L RLKVPP
Sbjct: 37 -----------------------GQAVQPKRNLSRYVKWPEYVRLQRQKKILSIRLKVPP 73
Query: 136 PVHQFTQAVDKQTASQLFKFLEKYRPESWEAKKQRLK----ARAEKKIAKKEDTPTKKPN 191
+ QF +D+ TA++ FK KYRPE+ KK+RL A AE K +K++ +P KP
Sbjct: 74 TIAQFQYTLDRNTAAETFKLFNKYRPETAAEKKERLTKEAAAIAEGK-SKQDASP--KPY 130
Query: 192 QIKQGTNTVTRLVVKKKASLVIIAHDVDPIELFKFLEKYRPESWEAKKQRLKARAEKKIA 251
+K G N V L+ KKA LV+IA+DVDPIEL FL +
Sbjct: 131 AVKYGLNHVVSLIENKKAKLVLIANDVDPIELVVFLP--------------------ALC 170
Query: 252 KKEDTPTKKPNQIKQGTNTVTRLVVKKKASLVIIAHDVDPIELVLFLPALCRKMGIPYCI 311
KK P I +G + LV +K +++ +
Sbjct: 171 KKMGVPY----AIIKGKARLGTLVNQKTSAVAALTE------------------------ 202
Query: 312 VDSSDKANLAKLIESVKVNFTDRYDEIRRQWGGGSLGSKSAARIAKLERAKAKELA 367
V + D+A LAKL+ ++ NF D+YDE+++ WGGG LG+K+ A++ K RAK + A
Sbjct: 203 VRAEDEAALAKLVSTIDANFADKYDEVKKHWGGGILGNKAQAKMDK--RAKTSDSA 256
>sp|P0DJ14|RL7A_TETTH 60S ribosomal protein L7a OS=Tetrahymena thermophila GN=RPL7A PE=1
SV=1
Length = 255
Score = 171 bits (432), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 109/267 (40%), Positives = 143/267 (53%), Gaps = 50/267 (18%)
Query: 99 GQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLKVPPPVHQFTQAVDKQTASQLFKFLEK 158
G DIQPKRDL+RFV+WP+YI +QRQK VL +RLKVPP +HQFT+ +DK +S LFK L
Sbjct: 32 GGDIQPKRDLTRFVRWPRYITLQRQKRVLLQRLKVPPQIHQFTKTLDKNQSSNLFKLLAS 91
Query: 159 YRPESWEAKKQRLKARAEKKIAKKEDTPTKKPNQIKQGTNTVTRLVVKKKASLVIIAHDV 218
Y PE KKQRL A+AE K K+ TKKP +K G N +T L+ K+A LV+IAHDV
Sbjct: 92 YAPEKPAEKKQRLVAQAEAKKDGKQ-VETKKPIVLKYGLNHITTLIENKQAKLVVIAHDV 150
Query: 219 DPIELFKFLEKYRPESWEAKKQRLKARAEKKIAKKEDTPTKKPNQIKQGTNTVTRLVVKK 278
DPIEL FL ++ +K D P +G + +LV KK
Sbjct: 151 DPIELVIFLP--------------------QLCRKNDVPFA----FVKGKAALGKLVNKK 186
Query: 279 KASLVIIAHDVDPIELVLFLPALCRKMGIPYCIVDSSDKANLAKLIESVKVNFTDRYDEI 338
A+ V + V + DKA L + E K N+ + DE+
Sbjct: 187 TATAVALTE------------------------VRNEDKAKLQQFSELFKTNY-NANDEL 221
Query: 339 RRQWGGGSLGSKSAARIAKLERAKAKE 365
R+ WGGG LG KS ++ L +A +E
Sbjct: 222 RKTWGGGILGQKSQHKVEALAKAVQEE 248
>sp|Q54ZD1|RL7A_DICDI 60S ribosomal protein L7a OS=Dictyostelium discoideum GN=rpl7a PE=1
SV=1
Length = 285
Score = 160 bits (405), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 107/272 (39%), Positives = 146/272 (53%), Gaps = 53/272 (19%)
Query: 98 TGQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLKVPPPVHQFTQAVDKQTASQLFKFLE 157
TG +QPKRDL+ F WP+YI++QRQ+ VL KRLKVPP ++QFT+ DK TA LFK L+
Sbjct: 56 TGFGVQPKRDLTHFTHWPRYIKLQRQRRVLLKRLKVPPTINQFTRVFDKNTAVHLFKLLD 115
Query: 158 KYRPESWEAKKQRLKARAEKKIA--KKEDTP-TKKPNQ-IKQGTNTVTRLVVKKKASLVI 213
KYRPE KK RL AE + A K + P +KP Q ++ G ++VT+L+ KKKA LV+
Sbjct: 116 KYRPEEASVKKARLLKIAEARAATPKGQAAPKAEKPVQHLRFGIDSVTKLIEKKKAKLVV 175
Query: 214 IAHDVDPIELFKFLEKYRPESWEAKKQRLKARAEKKIAKKEDTPTKKPNQIKQGTNTVTR 273
IAHDVDP+EL +L + ++ D P
Sbjct: 176 IAHDVDPVELVLYLP--------------------TLCRRMDVPY--------------- 200
Query: 274 LVVKKKASLVIIAHDVDPIELVLFLPALCRKMGIPYCIVDSSDKANLAKLIESVKVNFTD 333
+VK K+ L ELV A C + V+S+D LA L+ES K F +
Sbjct: 201 CIVKSKSRLG---------ELVHMRNASC----VALTGVNSADSNELALLVESAKQMFNN 247
Query: 334 RYDEIRRQWGGGSLGSKSAARIAKLERAKAKE 365
E R+ WGG +L + A +AK ++A+AKE
Sbjct: 248 N-SEHRKTWGGNTLSGPARAILAKRQKAEAKE 278
>sp|Q29375|RL7A_PIG 60S ribosomal protein L7a (Fragment) OS=Sus scrofa GN=RPL7A PE=2
SV=1
Length = 132
Score = 119 bits (299), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/128 (55%), Positives = 83/128 (64%), Gaps = 23/128 (17%)
Query: 222 ELFKFLEKYRPESWEAKKQRLKARAEKKIAKKEDTPTKKPNQIKQGTNTVTRLVVKKKAS 281
+L K KYRPE+ + KKQRL ARAEKK A K D PTK+P ++ G NTVT LV KKA
Sbjct: 5 QLLKVAHKYRPETKQEKKQRLLARAEKKAAXKGDVPTKRPPVLRAGVNTVTTLVENKKAQ 64
Query: 282 LVIIAHDVDPIELVLFLPALCRKMGIPYCI-----------------------VDSSDKA 318
LV+IAHDVDPIELV+FLPALCRKMG+PYCI V+S DK
Sbjct: 65 LVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGKARLGRLVHRKTCTTVAFTQVNSEDKG 124
Query: 319 NLAKLIES 326
LAKL+E+
Sbjct: 125 ALAKLVEA 132
Score = 88.2 bits (217), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 53/81 (65%), Positives = 60/81 (74%)
Query: 147 QTASQLFKFLEKYRPESWEAKKQRLKARAEKKIAKKEDTPTKKPNQIKQGTNTVTRLVVK 206
QTA+QL K KYRPE+ + KKQRL ARAEKK A K D PTK+P ++ G NTVT LV
Sbjct: 1 QTATQLLKVAHKYRPETKQEKKQRLLARAEKKAAXKGDVPTKRPPVLRAGVNTVTTLVEN 60
Query: 207 KKASLVIIAHDVDPIELFKFL 227
KKA LV+IAHDVDPIEL FL
Sbjct: 61 KKAQLVVIAHDVDPIELVVFL 81
>sp|Q8SSG1|RL7A_ENCCU 60S ribosomal protein L7a OS=Encephalitozoon cuniculi (strain
GB-M1) GN=RPL7A PE=1 SV=1
Length = 193
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 78/157 (49%), Gaps = 35/157 (22%)
Query: 212 VIIAHDVDP-IELFKFLEKYRPESWEAKKQRLKARAEKKIAKKEDTPTKKPNQIKQGTNT 270
V+ HD +ELF KYRPE+ + K+ RL++ KK KP +K G
Sbjct: 38 VLSEHDTKKFVELFM---KYRPENKQEKRIRLQSEDPKK--------GPKPILVKFGLKH 86
Query: 271 VTRLVVKKKASLVIIAHDVDPIELVLFLPALCRKMGIPYCIVDSS--------------- 315
VT L+ KKA LV+I+ VDPIE+V+FLP LCRKMG+ Y IV++S
Sbjct: 87 VTNLIETKKAKLVLISASVDPIEVVIFLPTLCRKMGVSYAIVENSTLLGKLVNLKTTSCV 146
Query: 316 --------DKANLAKLIESVKVNFTDRYDEIRRQWGG 344
D+ + +++ + F D Y+ WGG
Sbjct: 147 CLCDVRPEDEGSFKEMLRTADAIFLDNYETHLSTWGG 183
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 60/110 (54%), Gaps = 8/110 (7%)
Query: 118 IRIQRQKAVLQKRLKVPPPVHQFTQAVDKQTASQLFKFLEKYRPESWEAKKQRLKARAEK 177
+ I+++ + L +++PP ++QF + + + + KYRPE+ + K+ RL++ K
Sbjct: 13 LLIKKKVSKLANSIRIPPAIYQFRTVLSEHDTKKFVELFMKYRPENKQEKRIRLQSEDPK 72
Query: 178 KIAKKEDTPTKKPNQIKQGTNTVTRLVVKKKASLVIIAHDVDPIELFKFL 227
K KP +K G VT L+ KKA LV+I+ VDPIE+ FL
Sbjct: 73 K--------GPKPILVKFGLKHVTNLIETKKAKLVLISASVDPIEVVIFL 114
>sp|P62427|RL7A_NANEQ 50S ribosomal protein L7Ae OS=Nanoarchaeum equitans (strain Kin4-M)
GN=rpl7ae PE=3 SV=1
Length = 125
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 42/60 (70%)
Query: 258 TKKPNQIKQGTNTVTRLVVKKKASLVIIAHDVDPIELVLFLPALCRKMGIPYCIVDSSDK 317
++ +I++GTN T+ V + +A LVIIA +V+P E+V+ LPALC + G+PY V S ++
Sbjct: 27 ARETGKIRKGTNETTKAVERGQAKLVIIAENVNPPEIVMHLPALCEEKGVPYVYVPSKEE 86
Score = 34.7 bits (78), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 27/41 (65%)
Query: 187 TKKPNQIKQGTNTVTRLVVKKKASLVIIAHDVDPIELFKFL 227
++ +I++GTN T+ V + +A LVIIA +V+P E+ L
Sbjct: 27 ARETGKIRKGTNETTKAVERGQAKLVIIAENVNPPEIVMHL 67
>sp|Q5JGR3|RL7A_PYRKO 50S ribosomal protein L7Ae OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=rpl7ae PE=3 SV=2
Length = 123
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 61/131 (46%), Gaps = 29/131 (22%)
Query: 240 QRLKARAEKKIAKKEDTPTKKPNQIKQGTNTVTRLVVKKKASLVIIAHDVDPIELVLFLP 299
Q L +A + + DT +I++GTN T+ V + +A LVIIA DVDP E+V LP
Sbjct: 13 QELAEKALEAVEIARDT-----GRIRKGTNETTKAVERGQAKLVIIAEDVDPEEIVAHLP 67
Query: 300 ALCRKMGIPYCIVDSSDKANLAKLIESVKVNFTDRYDEIRRQWGGGSLGSKSAARIAKLE 359
LC + IPY V S +++ G + AA +A +E
Sbjct: 68 PLCEEKEIPYVYVPS------------------------KKELGAAAGLEVPAASVAIIE 103
Query: 360 RAKAKELAQKV 370
KA+EL + +
Sbjct: 104 PGKARELVEDI 114
Score = 40.0 bits (92), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 42/83 (50%), Gaps = 10/83 (12%)
Query: 169 QRLKARAEKKIAKKEDTPTKKPNQIKQGTNTVTRLVVKKKASLVIIAHDVDPIELFKFL- 227
Q L +A + + DT +I++GTN T+ V + +A LVIIA DVDP E+ L
Sbjct: 13 QELAEKALEAVEIARDT-----GRIRKGTNETTKAVERGQAKLVIIAEDVDPEEIVAHLP 67
Query: 228 ----EKYRPESWEAKKQRLKARA 246
EK P + K+ L A A
Sbjct: 68 PLCEEKEIPYVYVPSKKELGAAA 90
>sp|B6YWH9|RL7A_THEON 50S ribosomal protein L7Ae OS=Thermococcus onnurineus (strain NA1)
GN=rpl7ae PE=3 SV=1
Length = 123
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 39/64 (60%)
Query: 262 NQIKQGTNTVTRLVVKKKASLVIIAHDVDPIELVLFLPALCRKMGIPYCIVDSSDKANLA 321
+I++GTN T+ V + +A LVIIA DVDP E+V LP LC + IPY V S + A
Sbjct: 30 GRIRKGTNETTKAVERGQAKLVIIAEDVDPEEIVAHLPPLCEEKEIPYIYVPSKKELGAA 89
Query: 322 KLIE 325
IE
Sbjct: 90 AGIE 93
Score = 39.7 bits (91), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 34/61 (55%), Gaps = 5/61 (8%)
Query: 191 NQIKQGTNTVTRLVVKKKASLVIIAHDVDPIELFKFL-----EKYRPESWEAKKQRLKAR 245
+I++GTN T+ V + +A LVIIA DVDP E+ L EK P + K+ L A
Sbjct: 30 GRIRKGTNETTKAVERGQAKLVIIAEDVDPEEIVAHLPPLCEEKEIPYIYVPSKKELGAA 89
Query: 246 A 246
A
Sbjct: 90 A 90
>sp|A8A912|RL7A_IGNH4 50S ribosomal protein L7Ae OS=Ignicoccus hospitalis (strain KIN4/I
/ DSM 18386 / JCM 14125) GN=rpl7ae PE=3 SV=1
Length = 128
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 38/64 (59%)
Query: 262 NQIKQGTNTVTRLVVKKKASLVIIAHDVDPIELVLFLPALCRKMGIPYCIVDSSDKANLA 321
+IK+GTN T+ V K A LV+IA DVDP E+V LP LC + IPY V S K A
Sbjct: 31 GKIKKGTNETTKAVDKGLAKLVLIAEDVDPPEIVAHLPLLCEEKKIPYVYVPSKKKLGEA 90
Query: 322 KLIE 325
IE
Sbjct: 91 AGIE 94
Score = 38.1 bits (87), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 24/37 (64%)
Query: 191 NQIKQGTNTVTRLVVKKKASLVIIAHDVDPIELFKFL 227
+IK+GTN T+ V K A LV+IA DVDP E+ L
Sbjct: 31 GKIKKGTNETTKAVDKGLAKLVLIAEDVDPPEIVAHL 67
>sp|B8D6E8|RL7A_DESK1 50S ribosomal protein L7Ae OS=Desulfurococcus kamchatkensis (strain
1221n / DSM 18924) GN=rpl7ae PE=3 SV=1
Length = 127
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 39/64 (60%)
Query: 262 NQIKQGTNTVTRLVVKKKASLVIIAHDVDPIELVLFLPALCRKMGIPYCIVDSSDKANLA 321
+IK+GTN T+ V + +A LV+IA DVDP E+V LP LC + IPY V S K A
Sbjct: 31 GKIKKGTNETTKAVERGQAKLVVIAEDVDPPEIVAHLPLLCDEKKIPYVYVPSKQKLGQA 90
Query: 322 KLIE 325
IE
Sbjct: 91 AGIE 94
Score = 40.0 bits (92), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 34/61 (55%), Gaps = 5/61 (8%)
Query: 191 NQIKQGTNTVTRLVVKKKASLVIIAHDVDPIELFKFL-----EKYRPESWEAKKQRLKAR 245
+IK+GTN T+ V + +A LV+IA DVDP E+ L EK P + KQ+L
Sbjct: 31 GKIKKGTNETTKAVERGQAKLVVIAEDVDPPEIVAHLPLLCDEKKIPYVYVPSKQKLGQA 90
Query: 246 A 246
A
Sbjct: 91 A 91
>sp|Q9YAX7|RL7A_AERPE 50S ribosomal protein L7Ae OS=Aeropyrum pernix (strain ATCC 700893
/ DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=rpl7ae
PE=1 SV=1
Length = 127
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 41/68 (60%)
Query: 258 TKKPNQIKQGTNTVTRLVVKKKASLVIIAHDVDPIELVLFLPALCRKMGIPYCIVDSSDK 317
++ +IK+GTN T+ V + A LV+IA DVDP E+V+ LP LC + IPY V S +
Sbjct: 26 ARETGRIKKGTNETTKAVERGLAKLVVIAEDVDPPEIVMHLPLLCDEKKIPYVYVPSKKR 85
Query: 318 ANLAKLIE 325
A IE
Sbjct: 86 LGEAAGIE 93
Score = 39.3 bits (90), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Query: 187 TKKPNQIKQGTNTVTRLVVKKKASLVIIAHDVDPIELFKFL-----EKYRPESWEAKKQR 241
++ +IK+GTN T+ V + A LV+IA DVDP E+ L EK P + K+R
Sbjct: 26 ARETGRIKKGTNETTKAVERGLAKLVVIAEDVDPPEIVMHLPLLCDEKKIPYVYVPSKKR 85
Query: 242 LKARAEKKIA 251
L A ++A
Sbjct: 86 LGEAAGIEVA 95
>sp|A2BK92|RL7A_HYPBU 50S ribosomal protein L7Ae OS=Hyperthermus butylicus (strain DSM
5456 / JCM 9403) GN=rpl7ae PE=3 SV=1
Length = 127
Score = 55.8 bits (133), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 40/68 (58%)
Query: 258 TKKPNQIKQGTNTVTRLVVKKKASLVIIAHDVDPIELVLFLPALCRKMGIPYCIVDSSDK 317
+K +IK+GTN T+ V + A LV+IA DVDP E+V LP LC + IPY V S +
Sbjct: 26 ARKTGKIKKGTNETTKCVERGLAKLVLIAEDVDPPEIVAHLPLLCEEKKIPYVYVPSKKR 85
Query: 318 ANLAKLIE 325
A IE
Sbjct: 86 LGEAAGIE 93
Score = 40.8 bits (94), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 187 TKKPNQIKQGTNTVTRLVVKKKASLVIIAHDVDPIELFKFL-----EKYRPESWEAKKQR 241
+K +IK+GTN T+ V + A LV+IA DVDP E+ L EK P + K+R
Sbjct: 26 ARKTGKIKKGTNETTKCVERGLAKLVLIAEDVDPPEIVAHLPLLCEEKKIPYVYVPSKKR 85
Query: 242 LKARAEKKIAKKEDT---PTKKPNQIKQGTNTVTRL 274
L A ++A P + N +++ V L
Sbjct: 86 LGEAAGIEVAAASACIIDPGEAKNLVEEIVKAVNEL 121
>sp|A3DMR6|RL7A_STAMF 50S ribosomal protein L7Ae OS=Staphylothermus marinus (strain ATCC
43588 / DSM 3639 / F1) GN=rpl7ae PE=3 SV=1
Length = 128
Score = 55.8 bits (133), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 38/64 (59%)
Query: 262 NQIKQGTNTVTRLVVKKKASLVIIAHDVDPIELVLFLPALCRKMGIPYCIVDSSDKANLA 321
+IK+GTN T+ V + A LVIIA DVDP E+V LP LC + IPY V S + A
Sbjct: 31 GKIKKGTNETTKAVERGIAKLVIIAEDVDPPEIVAHLPLLCDEKKIPYVYVPSKKRLGEA 90
Query: 322 KLIE 325
IE
Sbjct: 91 AGIE 94
Score = 40.4 bits (93), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Query: 191 NQIKQGTNTVTRLVVKKKASLVIIAHDVDPIELFKFL-----EKYRPESWEAKKQRLKAR 245
+IK+GTN T+ V + A LVIIA DVDP E+ L EK P + K+RL
Sbjct: 31 GKIKKGTNETTKAVERGIAKLVIIAEDVDPPEIVAHLPLLCDEKKIPYVYVPSKKRLGEA 90
Query: 246 AEKKIA 251
A ++A
Sbjct: 91 AGIEVA 96
>sp|A5UJN3|RL7A_METS3 50S ribosomal protein L7Ae OS=Methanobrevibacter smithii (strain PS
/ ATCC 35061 / DSM 861) GN=rpl7ae PE=3 SV=1
Length = 123
Score = 55.5 bits (132), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 55/116 (47%), Gaps = 36/116 (31%)
Query: 248 KKIAKKEDTPTKKPNQ-------------IKQGTNTVTRLVVKKKASLVIIAHDVDPIEL 294
K I K DTP + NQ + +GTN VT+ + + A+LV+IA DVDP E+
Sbjct: 3 KAIYVKFDTPEELANQAEEALKTAQDSGKVAKGTNEVTKFIERGDAALVVIAEDVDPAEI 62
Query: 295 VLFLPALCRKMGIPY----------------------CIVDSSD-KANLAKLIESV 327
V +P L + IPY CIVD+ D + ++A+++E +
Sbjct: 63 VAHIPVLADEKEIPYIYLPTKEQVGGAAGLTVGTASACIVDAGDAEGDVAEIVEKI 118
Score = 40.8 bits (94), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 13/64 (20%)
Query: 177 KKIAKKEDTPTKKPNQ-------------IKQGTNTVTRLVVKKKASLVIIAHDVDPIEL 223
K I K DTP + NQ + +GTN VT+ + + A+LV+IA DVDP E+
Sbjct: 3 KAIYVKFDTPEELANQAEEALKTAQDSGKVAKGTNEVTKFIERGDAALVVIAEDVDPAEI 62
Query: 224 FKFL 227
+
Sbjct: 63 VAHI 66
>sp|C5A1V9|RL7A_THEGJ 50S ribosomal protein L7Ae OS=Thermococcus gammatolerans (strain
DSM 15229 / JCM 11827 / EJ3) GN=rpl7ae PE=3 SV=1
Length = 123
Score = 55.5 bits (132), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 43/75 (57%), Gaps = 5/75 (6%)
Query: 240 QRLKARAEKKIAKKEDTPTKKPNQIKQGTNTVTRLVVKKKASLVIIAHDVDPIELVLFLP 299
Q L +A + + DT +I++GTN T+ V + +A LVIIA DVDP E+V LP
Sbjct: 13 QELAEKALEAVEIARDT-----GRIRKGTNETTKAVERGQAKLVIIAEDVDPEEIVAHLP 67
Query: 300 ALCRKMGIPYCIVDS 314
LC + IPY V S
Sbjct: 68 PLCEEKEIPYIYVPS 82
Score = 38.5 bits (88), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Query: 169 QRLKARAEKKIAKKEDTPTKKPNQIKQGTNTVTRLVVKKKASLVIIAHDVDPIELFKFL 227
Q L +A + + DT +I++GTN T+ V + +A LVIIA DVDP E+ L
Sbjct: 13 QELAEKALEAVEIARDT-----GRIRKGTNETTKAVERGQAKLVIIAEDVDPEEIVAHL 66
>sp|P62009|RL7A_PYRHO 50S ribosomal protein L7Ae OS=Pyrococcus horikoshii (strain ATCC
700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=rpl7ae PE=1 SV=1
Length = 123
Score = 55.5 bits (132), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 35/53 (66%)
Query: 262 NQIKQGTNTVTRLVVKKKASLVIIAHDVDPIELVLFLPALCRKMGIPYCIVDS 314
+I++GTN T+ V + +A LVIIA DVDP E+V LP LC + IPY V S
Sbjct: 30 GKIRKGTNETTKAVERGQAKLVIIAEDVDPEEIVAHLPPLCEEKEIPYIYVPS 82
Score = 38.5 bits (88), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 191 NQIKQGTNTVTRLVVKKKASLVIIAHDVDPIELFKFL 227
+I++GTN T+ V + +A LVIIA DVDP E+ L
Sbjct: 30 GKIRKGTNETTKAVERGQAKLVIIAEDVDPEEIVAHL 66
>sp|P62008|RL7A_PYRAB 50S ribosomal protein L7Ae OS=Pyrococcus abyssi (strain GE5 /
Orsay) GN=rpl7ae PE=1 SV=1
Length = 123
Score = 55.5 bits (132), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 35/53 (66%)
Query: 262 NQIKQGTNTVTRLVVKKKASLVIIAHDVDPIELVLFLPALCRKMGIPYCIVDS 314
+I++GTN T+ V + +A LVIIA DVDP E+V LP LC + IPY V S
Sbjct: 30 GKIRKGTNETTKAVERGQAKLVIIAEDVDPEEIVAHLPPLCEEKEIPYIYVPS 82
Score = 38.5 bits (88), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 191 NQIKQGTNTVTRLVVKKKASLVIIAHDVDPIELFKFL 227
+I++GTN T+ V + +A LVIIA DVDP E+ L
Sbjct: 30 GKIRKGTNETTKAVERGQAKLVIIAEDVDPEEIVAHL 66
>sp|Q8U160|RL7A_PYRFU 50S ribosomal protein L7Ae OS=Pyrococcus furiosus (strain ATCC
43587 / DSM 3638 / JCM 8422 / Vc1) GN=rpl7ae PE=1 SV=2
Length = 123
Score = 55.5 bits (132), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 35/53 (66%)
Query: 262 NQIKQGTNTVTRLVVKKKASLVIIAHDVDPIELVLFLPALCRKMGIPYCIVDS 314
+I++GTN T+ V + +A LVIIA DVDP E+V LP LC + IPY V S
Sbjct: 30 GKIRKGTNETTKAVERGQAKLVIIAEDVDPEEIVAHLPPLCEEKEIPYIYVPS 82
Score = 38.5 bits (88), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 191 NQIKQGTNTVTRLVVKKKASLVIIAHDVDPIELFKFL 227
+I++GTN T+ V + +A LVIIA DVDP E+ L
Sbjct: 30 GKIRKGTNETTKAVERGQAKLVIIAEDVDPEEIVAHL 66
>sp|P54066|RL7A_METJA 50S ribosomal protein L7Ae OS=Methanocaldococcus jannaschii (strain
ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=rpl7ae PE=1 SV=2
Length = 117
Score = 55.1 bits (131), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 35/55 (63%)
Query: 260 KPNQIKQGTNTVTRLVVKKKASLVIIAHDVDPIELVLFLPALCRKMGIPYCIVDS 314
K +IK+G N VT+ V + A LVIIA DV P E+V LP LC + GIPY V S
Sbjct: 23 KAQKIKKGANEVTKAVERGIAKLVIIAEDVKPEEVVAHLPYLCEEKGIPYAYVAS 77
Score = 38.9 bits (89), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 37/68 (54%), Gaps = 5/68 (7%)
Query: 189 KPNQIKQGTNTVTRLVVKKKASLVIIAHDVDPIELFKFL-----EKYRPESWEAKKQRLK 243
K +IK+G N VT+ V + A LVIIA DV P E+ L EK P ++ A KQ L
Sbjct: 23 KAQKIKKGANEVTKAVERGIAKLVIIAEDVKPEEVVAHLPYLCEEKGIPYAYVASKQDLG 82
Query: 244 ARAEKKIA 251
A ++A
Sbjct: 83 KAAGLEVA 90
>sp|P55858|RL7A_SULSO 50S ribosomal protein L7Ae OS=Sulfolobus solfataricus (strain ATCC
35092 / DSM 1617 / JCM 11322 / P2) GN=rpl7ae PE=1 SV=2
Length = 127
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 36/56 (64%)
Query: 259 KKPNQIKQGTNTVTRLVVKKKASLVIIAHDVDPIELVLFLPALCRKMGIPYCIVDS 314
K+ +IK+GTN T+ V + +A LVIIA DV P E+V LP LC + IPY V S
Sbjct: 27 KESGKIKKGTNETTKAVERGQAKLVIIAEDVQPEEIVAHLPLLCDEKKIPYVYVSS 82
Score = 37.7 bits (86), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 188 KKPNQIKQGTNTVTRLVVKKKASLVIIAHDVDPIELFKFL 227
K+ +IK+GTN T+ V + +A LVIIA DV P E+ L
Sbjct: 27 KESGKIKKGTNETTKAVERGQAKLVIIAEDVQPEEIVAHL 66
>sp|B9LPY2|RL7A_HALLT 50S ribosomal protein L7Ae OS=Halorubrum lacusprofundi (strain ATCC
49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=rpl7ae PE=3
SV=1
Length = 120
Score = 54.7 bits (130), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 5/84 (5%)
Query: 242 LKARAEKKIAKKEDTPTKKPNQIKQGTNTVTRLVVKKKASLVIIAHDVDPIELVLFLPAL 301
L R+ + + DT T +K+GTN T+ V + A LVI+A DV P E+V+ LP L
Sbjct: 13 LAERSLEALEVARDTGT-----VKKGTNETTKAVERGNADLVIVAEDVSPEEIVMHLPEL 67
Query: 302 CRKMGIPYCIVDSSDKANLAKLIE 325
+ GIP VD+ D+ A +E
Sbjct: 68 AEEKGIPVVFVDTQDEVGHAAGLE 91
Score = 34.3 bits (77), Expect = 1.4, Method: Composition-based stats.
Identities = 25/68 (36%), Positives = 34/68 (50%), Gaps = 9/68 (13%)
Query: 171 LKARAEKKIAKKEDTPTKKPNQIKQGTNTVTRLVVKKKASLVIIAHDVDPIELFKFLEKY 230
L R+ + + DT T +K+GTN T+ V + A LVI+A DV P E+ L
Sbjct: 13 LAERSLEALEVARDTGT-----VKKGTNETTKAVERGNADLVIVAEDVSPEEIVMHL--- 64
Query: 231 RPESWEAK 238
PE E K
Sbjct: 65 -PELAEEK 71
>sp|B1Y9V4|RL7A_PYRNV 50S ribosomal protein L7Ae OS=Pyrobaculum neutrophilum (strain DSM
2338 / JCM 9278 / V24Sta) GN=rpl7ae PE=3 SV=1
Length = 151
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 38/60 (63%)
Query: 258 TKKPNQIKQGTNTVTRLVVKKKASLVIIAHDVDPIELVLFLPALCRKMGIPYCIVDSSDK 317
K+ +IK+GTN T+ V + A LV+IA DVDP E+V LP LC + +PY V S +K
Sbjct: 41 AKQTGKIKKGTNEATKAVERGLAKLVLIAEDVDPPEVVAHLPLLCEEKKVPYVYVPSKEK 100
Score = 38.1 bits (87), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 5/61 (8%)
Query: 187 TKKPNQIKQGTNTVTRLVVKKKASLVIIAHDVDPIELFKFL-----EKYRPESWEAKKQR 241
K+ +IK+GTN T+ V + A LV+IA DVDP E+ L EK P + K++
Sbjct: 41 AKQTGKIKKGTNEATKAVERGLAKLVLIAEDVDPPEVVAHLPLLCEEKKVPYVYVPSKEK 100
Query: 242 L 242
L
Sbjct: 101 L 101
>sp|Q8TV03|RL7A_METKA 50S ribosomal protein L7Ae OS=Methanopyrus kandleri (strain AV19 /
DSM 6324 / JCM 9639 / NBRC 100938) GN=rpl7ae PE=3 SV=1
Length = 123
Score = 54.3 bits (129), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 39/55 (70%)
Query: 263 QIKQGTNTVTRLVVKKKASLVIIAHDVDPIELVLFLPALCRKMGIPYCIVDSSDK 317
+I++GTN T+ V +++A LV+IA DVDP E+V LP LC + GIPY V S D+
Sbjct: 31 RIRKGTNETTKAVEREEAVLVLIAEDVDPEEVVAHLPELCDEKGIPYVYVPSKDE 85
Score = 33.9 bits (76), Expect = 1.9, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 26/36 (72%)
Query: 192 QIKQGTNTVTRLVVKKKASLVIIAHDVDPIELFKFL 227
+I++GTN T+ V +++A LV+IA DVDP E+ L
Sbjct: 31 RIRKGTNETTKAVEREEAVLVLIAEDVDPEEVVAHL 66
>sp|C3N8Q2|RL7A_SULIY 50S ribosomal protein L7Ae OS=Sulfolobus islandicus (strain
Y.G.57.14 / Yellowstone #1) GN=rpl7ae PE=3 SV=1
Length = 127
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 36/56 (64%)
Query: 259 KKPNQIKQGTNTVTRLVVKKKASLVIIAHDVDPIELVLFLPALCRKMGIPYCIVDS 314
K+ +IK+GTN T+ V + +A LV+IA DV P E+V LP LC + IPY V S
Sbjct: 27 KESGKIKKGTNETTKAVERGQAKLVVIAEDVQPEEIVAHLPLLCDEKKIPYVYVSS 82
Score = 37.0 bits (84), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 26/40 (65%)
Query: 188 KKPNQIKQGTNTVTRLVVKKKASLVIIAHDVDPIELFKFL 227
K+ +IK+GTN T+ V + +A LV+IA DV P E+ L
Sbjct: 27 KESGKIKKGTNETTKAVERGQAKLVVIAEDVQPEEIVAHL 66
>sp|C3NMR6|RL7A_SULIN 50S ribosomal protein L7Ae OS=Sulfolobus islandicus (strain
Y.N.15.51 / Yellowstone #2) GN=rpl7ae PE=3 SV=1
Length = 127
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 36/56 (64%)
Query: 259 KKPNQIKQGTNTVTRLVVKKKASLVIIAHDVDPIELVLFLPALCRKMGIPYCIVDS 314
K+ +IK+GTN T+ V + +A LV+IA DV P E+V LP LC + IPY V S
Sbjct: 27 KESGKIKKGTNETTKAVERGQAKLVVIAEDVQPEEIVAHLPLLCDEKKIPYVYVSS 82
Score = 37.0 bits (84), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 26/40 (65%)
Query: 188 KKPNQIKQGTNTVTRLVVKKKASLVIIAHDVDPIELFKFL 227
K+ +IK+GTN T+ V + +A LV+IA DV P E+ L
Sbjct: 27 KESGKIKKGTNETTKAVERGQAKLVVIAEDVQPEEIVAHL 66
>sp|C3MYY9|RL7A_SULIM 50S ribosomal protein L7Ae OS=Sulfolobus islandicus (strain M.14.25
/ Kamchatka #1) GN=rpl7ae PE=3 SV=1
Length = 127
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 36/56 (64%)
Query: 259 KKPNQIKQGTNTVTRLVVKKKASLVIIAHDVDPIELVLFLPALCRKMGIPYCIVDS 314
K+ +IK+GTN T+ V + +A LV+IA DV P E+V LP LC + IPY V S
Sbjct: 27 KESGKIKKGTNETTKAVERGQAKLVVIAEDVQPEEIVAHLPLLCDEKKIPYVYVSS 82
Score = 37.0 bits (84), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 26/40 (65%)
Query: 188 KKPNQIKQGTNTVTRLVVKKKASLVIIAHDVDPIELFKFL 227
K+ +IK+GTN T+ V + +A LV+IA DV P E+ L
Sbjct: 27 KESGKIKKGTNETTKAVERGQAKLVVIAEDVQPEEIVAHL 66
>sp|C3MJN1|RL7A_SULIL 50S ribosomal protein L7Ae OS=Sulfolobus islandicus (strain
L.S.2.15 / Lassen #1) GN=rpl7ae PE=3 SV=1
Length = 127
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 36/56 (64%)
Query: 259 KKPNQIKQGTNTVTRLVVKKKASLVIIAHDVDPIELVLFLPALCRKMGIPYCIVDS 314
K+ +IK+GTN T+ V + +A LV+IA DV P E+V LP LC + IPY V S
Sbjct: 27 KESGKIKKGTNETTKAVERGQAKLVVIAEDVQPEEIVAHLPLLCDEKKIPYVYVSS 82
Score = 37.0 bits (84), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 26/40 (65%)
Query: 188 KKPNQIKQGTNTVTRLVVKKKASLVIIAHDVDPIELFKFL 227
K+ +IK+GTN T+ V + +A LV+IA DV P E+ L
Sbjct: 27 KESGKIKKGTNETTKAVERGQAKLVVIAEDVQPEEIVAHL 66
>sp|C4KJ77|RL7A_SULIK 50S ribosomal protein L7Ae OS=Sulfolobus islandicus (strain M.16.4
/ Kamchatka #3) GN=rpl7ae PE=3 SV=1
Length = 127
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 36/56 (64%)
Query: 259 KKPNQIKQGTNTVTRLVVKKKASLVIIAHDVDPIELVLFLPALCRKMGIPYCIVDS 314
K+ +IK+GTN T+ V + +A LV+IA DV P E+V LP LC + IPY V S
Sbjct: 27 KESGKIKKGTNETTKAVERGQAKLVVIAEDVQPEEIVAHLPLLCDEKKIPYVYVSS 82
Score = 37.0 bits (84), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 26/40 (65%)
Query: 188 KKPNQIKQGTNTVTRLVVKKKASLVIIAHDVDPIELFKFL 227
K+ +IK+GTN T+ V + +A LV+IA DV P E+ L
Sbjct: 27 KESGKIKKGTNETTKAVERGQAKLVVIAEDVQPEEIVAHL 66
>sp|C3N038|RL7A_SULIA 50S ribosomal protein L7Ae OS=Sulfolobus islandicus (strain
M.16.27) GN=rpl7ae PE=3 SV=1
Length = 127
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 36/56 (64%)
Query: 259 KKPNQIKQGTNTVTRLVVKKKASLVIIAHDVDPIELVLFLPALCRKMGIPYCIVDS 314
K+ +IK+GTN T+ V + +A LV+IA DV P E+V LP LC + IPY V S
Sbjct: 27 KESGKIKKGTNETTKAVERGQAKLVVIAEDVQPEEIVAHLPLLCDEKKIPYVYVSS 82
Score = 37.0 bits (84), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 26/40 (65%)
Query: 188 KKPNQIKQGTNTVTRLVVKKKASLVIIAHDVDPIELFKFL 227
K+ +IK+GTN T+ V + +A LV+IA DV P E+ L
Sbjct: 27 KESGKIKKGTNETTKAVERGQAKLVVIAEDVQPEEIVAHL 66
>sp|Q8ZTA5|RL7A_PYRAE 50S ribosomal protein L7Ae OS=Pyrobaculum aerophilum (strain ATCC
51768 / IM2 / DSM 7523 / JCM 9630 / NBRC 100827)
GN=rpl7ae PE=3 SV=1
Length = 151
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 36/56 (64%)
Query: 262 NQIKQGTNTVTRLVVKKKASLVIIAHDVDPIELVLFLPALCRKMGIPYCIVDSSDK 317
+IK+GTN T+ V + A LV+IA DVDP E+V LP LC + +PY V S +K
Sbjct: 45 GKIKKGTNETTKAVERGLAKLVLIAEDVDPPEVVAHLPLLCEEKKVPYVYVPSKEK 100
Score = 37.4 bits (85), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 191 NQIKQGTNTVTRLVVKKKASLVIIAHDVDPIELFKFL-----EKYRPESWEAKKQRL 242
+IK+GTN T+ V + A LV+IA DVDP E+ L EK P + K++L
Sbjct: 45 GKIKKGTNETTKAVERGLAKLVLIAEDVDPPEVVAHLPLLCEEKKVPYVYVPSKEKL 101
>sp|A3MTA9|RL7A_PYRCJ 50S ribosomal protein L7Ae OS=Pyrobaculum calidifontis (strain JCM
11548 / VA1) GN=rpl7ae PE=3 SV=1
Length = 149
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 36/56 (64%)
Query: 262 NQIKQGTNTVTRLVVKKKASLVIIAHDVDPIELVLFLPALCRKMGIPYCIVDSSDK 317
+IK+GTN T+ V + A LV+IA DVDP E+V LP LC + +PY V S +K
Sbjct: 45 GKIKKGTNETTKAVERGLAKLVLIAEDVDPPEVVAHLPLLCEEKKVPYVYVPSKEK 100
Score = 36.6 bits (83), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 191 NQIKQGTNTVTRLVVKKKASLVIIAHDVDPIELFKFL-----EKYRPESWEAKKQRL 242
+IK+GTN T+ V + A LV+IA DVDP E+ L EK P + K++L
Sbjct: 45 GKIKKGTNETTKAVERGLAKLVLIAEDVDPPEVVAHLPLLCEEKKVPYVYVPSKEKL 101
>sp|Q4J8P1|RL7A_SULAC 50S ribosomal protein L7Ae OS=Sulfolobus acidocaldarius (strain
ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB
11770) GN=rpl7ae PE=3 SV=1
Length = 126
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 35/57 (61%)
Query: 258 TKKPNQIKQGTNTVTRLVVKKKASLVIIAHDVDPIELVLFLPALCRKMGIPYCIVDS 314
K +IK+GTN T+ V + +A LV+IA DV P E+V LP LC + IPY V S
Sbjct: 26 AKDSGKIKKGTNETTKAVERSQAKLVVIAEDVQPEEIVAHLPLLCEEKKIPYVYVPS 82
Score = 37.0 bits (84), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 25/41 (60%)
Query: 187 TKKPNQIKQGTNTVTRLVVKKKASLVIIAHDVDPIELFKFL 227
K +IK+GTN T+ V + +A LV+IA DV P E+ L
Sbjct: 26 AKDSGKIKKGTNETTKAVERSQAKLVVIAEDVQPEEIVAHL 66
>sp|Q97BK8|RL7A_THEVO 50S ribosomal protein L7Ae OS=Thermoplasma volcanium (strain ATCC
51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1)
GN=rpl7ae PE=3 SV=1
Length = 121
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 56/111 (50%), Gaps = 25/111 (22%)
Query: 260 KPNQIKQGTNTVTRLVVKKKASLVIIAHDVDPIELVLFLPALCRKMGIPYCIVDSSDKAN 319
+ +IK+GTN V + + + ++ LV+IA DV+P E+V +LP+LC +PY V KA+
Sbjct: 27 RSGKIKKGTNEVIKSIERGESKLVVIAEDVNPPEVVYYLPSLCEDKKVPYVYV--KKKAD 84
Query: 320 LAKLIESVKVNFTDRYDEIRRQWGGGSLGSKSAARIAKLERAKAKELAQKV 370
L G +G SAA ++ ++ K +EL + +
Sbjct: 85 L-----------------------GSKVGIASAASVSIVDYGKNEELYKSI 112
Score = 35.0 bits (79), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 27/39 (69%)
Query: 189 KPNQIKQGTNTVTRLVVKKKASLVIIAHDVDPIELFKFL 227
+ +IK+GTN V + + + ++ LV+IA DV+P E+ +L
Sbjct: 27 RSGKIKKGTNEVIKSIERGESKLVVIAEDVNPPEVVYYL 65
>sp|O29494|RL7A_ARCFU 50S ribosomal protein L7Ae OS=Archaeoglobus fulgidus (strain ATCC
49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=rpl7ae PE=1 SV=1
Length = 119
Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 39/68 (57%)
Query: 258 TKKPNQIKQGTNTVTRLVVKKKASLVIIAHDVDPIELVLFLPALCRKMGIPYCIVDSSDK 317
++ ++K+GTN T+ V + A LV IA DVDP E+V LP LC + +PY V S +
Sbjct: 22 VRESGKVKKGTNETTKAVERGLAKLVYIAEDVDPPEIVAHLPLLCEEKNVPYIYVKSKND 81
Query: 318 ANLAKLIE 325
A IE
Sbjct: 82 LGRAVGIE 89
Score = 35.0 bits (79), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 25/41 (60%)
Query: 187 TKKPNQIKQGTNTVTRLVVKKKASLVIIAHDVDPIELFKFL 227
++ ++K+GTN T+ V + A LV IA DVDP E+ L
Sbjct: 22 VRESGKVKKGTNETTKAVERGLAKLVYIAEDVDPPEIVAHL 62
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.132 0.375
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 131,503,929
Number of Sequences: 539616
Number of extensions: 5346044
Number of successful extensions: 22491
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 109
Number of HSP's successfully gapped in prelim test: 124
Number of HSP's that attempted gapping in prelim test: 21824
Number of HSP's gapped (non-prelim): 629
length of query: 370
length of database: 191,569,459
effective HSP length: 119
effective length of query: 251
effective length of database: 127,355,155
effective search space: 31966143905
effective search space used: 31966143905
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)