Your job contains 1 sequence.
>psy6066
MAPPKKLGKKKVVGKSKKVAPAPLAVKKVEVKKVVNPLFEKKARNFGIGQDIQPKRDLSR
FVKWPKYIRIQRQKAVLQKRLKVPPPVHQFTQAVDKQTGQDIQPKRDLSRFVKWPKYIRI
QRQKAVLQKRLKVPPPVHQFTQAVDKQTASQLFKFLEKYRPESWEAKKQRLKARAEKKIA
KKEDTPTKKPNQIKQGTNTVTRLVVKKKASLVIIAHDVDPIELFKFLEKYRPESWEAKKQ
RLKARAEKKIAKKEDTPTKKPNQIKQGTNTVTRLVVKKKASLVIIAHDVDPIELVLFLPA
LCRKMGIPYCIVDSSDKANLAKLIESVKVNFTDRYDEIRRQWGGGSLGSKSAARIAKLER
AKAKELAQKV
The BLAST search returned 8 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy6066
(370 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0014026 - symbol:RpL7A "Ribosomal protein L7A" spe... 443 1.4e-69 3
WB|WBGene00004419 - symbol:rpl-7A species:6239 "Caenorhab... 420 5.2e-59 3
UNIPROTKB|F1M394 - symbol:F1M394 "Uncharacterized protein... 363 1.7e-58 3
ZFIN|ZDB-GENE-031001-9 - symbol:rpl7a "ribosomal protein ... 439 6.1e-54 2
RGD|2320354 - symbol:LOC100361311 "ribosomal protein L7a-... 432 9.9e-54 2
UNIPROTKB|Q2TBQ5 - symbol:RPL7A "60S ribosomal protein L7... 431 9.9e-54 2
UNIPROTKB|F2Z4P2 - symbol:RPL7A "Uncharacterized protein"... 431 1.3e-53 2
UNIPROTKB|P62424 - symbol:RPL7A "60S ribosomal protein L7... 431 1.3e-53 2
RGD|1307586 - symbol:Rpl7a "ribosomal protein L7a" specie... 431 1.3e-53 2
UNIPROTKB|P62425 - symbol:Rpl7a "60S ribosomal protein L7... 431 1.3e-53 2
UNIPROTKB|F1NHA8 - symbol:RPL7A "60S ribosomal protein L7... 429 2.6e-53 2
UNIPROTKB|F2Z4L5 - symbol:RPL7A "60S ribosomal protein L7... 429 2.6e-53 2
UNIPROTKB|P32429 - symbol:RPL7A "60S ribosomal protein L7... 429 2.6e-53 2
UNIPROTKB|F1M2H8 - symbol:F1M2H8 "Uncharacterized protein... 435 3.3e-53 2
UNIPROTKB|I3LVI8 - symbol:RPL7A "60S ribosomal protein L7... 431 4.2e-53 2
POMBASE|SPBC29A3.04 - symbol:rpl8 "60S ribosomal protein ... 361 6.0e-53 3
TAIR|locus:2062057 - symbol:AT2G47610 species:3702 "Arabi... 336 9.7e-53 3
RGD|1562953 - symbol:RGD1562953 "similar to Rpl7a protein... 420 1.8e-52 2
RGD|1595463 - symbol:LOC680161 "similar to 60S ribosomal ... 426 4.8e-52 2
RGD|1563045 - symbol:RGD1563045 "similar to 60S ribosomal... 420 2.0e-51 2
RGD|1564370 - symbol:RGD1564370 "similar to 60S ribosomal... 390 2.6e-49 2
RGD|1562409 - symbol:RGD1562409 "similar to 60S ribosomal... 396 4.2e-49 2
RGD|1583272 - symbol:LOC685027 "similar to 60S ribosomal ... 385 1.8e-48 2
RGD|1559149 - symbol:RGD1559149 "sim to 60S ribosomal pro... 374 6.8e-47 2
UNIPROTKB|F1LYB8 - symbol:F1LYB8 "Uncharacterized protein... 369 5.3e-45 2
ASPGD|ASPL0000029714 - symbol:AN5520 species:162425 "Emer... 369 7.6e-44 2
UNIPROTKB|D4A8X2 - symbol:D4A8X2 "Uncharacterized protein... 344 2.5e-43 2
CGD|CAL0005018 - symbol:RPL8B species:5476 "Candida albic... 351 8.5e-43 2
UNIPROTKB|Q5ANA1 - symbol:RPL8B "Likely cytosolic ribosom... 351 8.5e-43 2
CGD|CAL0000666 - symbol:RPL82 species:5476 "Candida albic... 351 1.1e-42 2
UNIPROTKB|Q59WJ0 - symbol:RPL82 "Likely cytosolic ribosom... 351 1.1e-42 2
TAIR|locus:2081715 - symbol:AT3G62870 species:3702 "Arabi... 336 2.2e-42 2
SGD|S000001025 - symbol:RPL8A "Ribosomal 60S subunit prot... 330 3.2e-41 2
UNIPROTKB|Q5T8U3 - symbol:RPL7A "60S ribosomal protein L7... 415 4.1e-41 2
SGD|S000003968 - symbol:RPL8B "Ribosomal 60S subunit prot... 329 4.1e-41 2
GENEDB_PFALCIPARUM|PF14_0231 - symbol:PF14_0231 "ribosoma... 315 5.8e-40 2
UNIPROTKB|Q8ILL2 - symbol:PF14_0231 "60S ribosomal protei... 315 5.8e-40 2
UNIPROTKB|F1LU72 - symbol:F1LU72 "Uncharacterized protein... 313 5.8e-40 2
UNIPROTKB|G4MSW3 - symbol:MGG_04612 "60S ribosomal protei... 340 4.0e-39 2
DICTYBASE|DDB_G0277629 - symbol:rpl7a "60S ribosomal prot... 337 2.2e-36 2
UNIPROTKB|D4A479 - symbol:D4A479 "Uncharacterized protein... 266 4.9e-33 2
WB|WBGene00022219 - symbol:Y73B3A.18 species:6239 "Caenor... 297 1.1e-27 2
UNIPROTKB|Q29375 - symbol:RPL7A "60S ribosomal protein L7... 295 4.0e-26 1
UNIPROTKB|Q5T8U2 - symbol:RPL7A "60S ribosomal protein L7... 242 8.1e-23 2
RGD|1359295 - symbol:Rsl1d1 "ribosomal L1 domain containi... 165 5.3e-22 3
UNIPROTKB|F1LT34 - symbol:F1LT34 "Uncharacterized protein... 214 8.7e-19 2
UNIPROTKB|F1M289 - symbol:F1M289 "Uncharacterized protein... 218 2.0e-18 2
UNIPROTKB|F1M843 - symbol:F1M843 "Uncharacterized protein... 205 3.0e-18 2
UNIPROTKB|Q2MHD3 - symbol:RPL7A "60S ribosomal protein L7... 151 9.3e-13 2
UNIPROTKB|P54066 - symbol:rpl7ae "50S ribosomal protein L... 134 1.6e-08 1
DICTYBASE|DDB_G0282243 - symbol:nhp2l1 "non-histone chrom... 121 4.3e-07 1
FB|FBgn0015393 - symbol:hoip "hoi-polloi" species:7227 "D... 119 7.2e-07 1
CGD|CAL0002459 - symbol:orf19.5885 species:5476 "Candida ... 112 4.3e-06 1
WB|WBGene00010896 - symbol:M28.5 species:6239 "Caenorhabd... 110 7.0e-06 1
SGD|S000000752 - symbol:SNU13 "RNA binding protein" speci... 109 9.1e-06 1
ASPGD|ASPL0000057404 - symbol:AN1319 species:162425 "Emer... 108 1.2e-05 1
UNIPROTKB|F1NII6 - symbol:NHP2L1 "Uncharacterized protein... 108 1.2e-05 1
POMBASE|SPAC607.03c - symbol:snu13 "U3 snoRNP-associated ... 108 1.2e-05 1
RGD|1566078 - symbol:RGD1566078 "similar to NHP2-like pro... 106 1.9e-05 1
UNIPROTKB|Q3B8S0 - symbol:NHP2L1 "NHP2-like protein 1" sp... 105 2.5e-05 1
UNIPROTKB|E2RRM7 - symbol:NHP2L1 "Uncharacterized protein... 105 2.5e-05 1
UNIPROTKB|B1AHD1 - symbol:NHP2L1 "NHP2-like protein 1" sp... 105 2.5e-05 1
UNIPROTKB|P55769 - symbol:NHP2L1 "NHP2-like protein 1" sp... 105 2.5e-05 1
UNIPROTKB|F2Z5V3 - symbol:NHP2L1 "Uncharacterized protein... 105 2.5e-05 1
RGD|1303103 - symbol:Nhp2l1 "NHP2 non-histone chromosome ... 105 2.5e-05 1
ZFIN|ZDB-GENE-030131-9670 - symbol:nhp2l1b "NHP2 non-hist... 105 2.5e-05 1
ZFIN|ZDB-GENE-040426-879 - symbol:nhp2l1a "NHP2 non-histo... 105 2.5e-05 1
UNIPROTKB|J9P8E9 - symbol:LOC609886 "Uncharacterized prot... 102 5.3e-05 1
TAIR|locus:2127455 - symbol:AT4G22380 species:3702 "Arabi... 99 0.00011 1
UNIPROTKB|G4MRY0 - symbol:MGG_02467 "Ribonucleoprotein-as... 98 0.00015 1
RGD|1309435 - symbol:Nhp2 "NHP2 ribonucleoprotein" specie... 97 0.00019 1
UNIPROTKB|D6RC52 - symbol:NHP2 "H/ACA ribonucleoprotein c... 96 0.00024 1
UNIPROTKB|Q8I7X7 - symbol:Q8I7X7 "H/ACA ribonucleoprotein... 104 0.00058 1
TAIR|locus:2181514 - symbol:AT5G08180 species:3702 "Arabi... 102 0.00091 1
UNIPROTKB|D6RCB9 - symbol:NHP2 "H/ACA ribonucleoprotein c... 96 0.00097 1
>FB|FBgn0014026 [details] [associations]
symbol:RpL7A "Ribosomal protein L7A" species:7227 "Drosophila
melanogaster" [GO:0022625 "cytosolic large ribosomal subunit"
evidence=ISS;NAS] [GO:0006412 "translation" evidence=ISS;NAS]
[GO:0003735 "structural constituent of ribosome"
evidence=ISS;IDA;NAS] [GO:0005840 "ribosome" evidence=IDA;NAS]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0007052
"mitotic spindle organization" evidence=IMP] [GO:0000022 "mitotic
spindle elongation" evidence=IMP] [GO:0051298 "centrosome
duplication" evidence=IMP] [GO:0051297 "centrosome organization"
evidence=IMP] InterPro:IPR004037 PROSITE:PS01082 InterPro:IPR004038
InterPro:IPR001921 Pfam:PF01248 GO:GO:0051298 EMBL:AE014298
GO:GO:0042254 GO:GO:0005840 GO:GO:0003735 GO:GO:0000022
eggNOG:COG1358 InterPro:IPR018492 PRINTS:PR00881 KO:K02936
PANTHER:PTHR23105:SF1 PRINTS:PR00882 CTD:6130
GeneTree:ENSGT00390000004753 OMA:QRSILYK EMBL:X82782 EMBL:AY089570
PIR:A57416 RefSeq:NP_511063.1 RefSeq:NP_727094.1 UniGene:Dm.7159
ProteinModelPortal:P46223 SMR:P46223 IntAct:P46223
MINT:MINT-1546463 STRING:P46223 PaxDb:P46223
EnsemblMetazoa:FBtr0070915 EnsemblMetazoa:FBtr0070916 GeneID:31588
KEGG:dme:Dmel_CG3314 FlyBase:FBgn0014026 InParanoid:P46223
OrthoDB:EOG41G1M2 PhylomeDB:P46223 ChiTaRS:RPL7A GenomeRNAi:31588
NextBio:774333 GermOnline:CG3314 Uniprot:P46223
Length = 271
Score = 443 (161.0 bits), Expect = 1.3e-55, Sum P(2) = 1.3e-55
Identities = 96/173 (55%), Positives = 116/173 (67%)
Query: 62 VKWPKYIRIQRQKAVLQKRLKVPPPVHQ--FTQAVDKQT-----GQDIQPKRDLSRFVKW 114
VK P+ + K V L V PV + Q +K+ GQ++QPKRDLSRFV+W
Sbjct: 3 VKKPRPKKKPVTKKVAPAPLAVKKPVVKKVVNQLFEKRPKNFGIGQNVQPKRDLSRFVRW 62
Query: 115 PKYIRIQRQKAVLQKRLKVPPPVHQFTQAVDKQTASQLFKFLEKYRPESWEAKKQRLXXX 174
PKYIR+QRQKAVLQKRLKVPPP+HQF+Q +DK TA +LFK LEKYRPES AKK RL
Sbjct: 63 PKYIRVQRQKAVLQKRLKVPPPIHQFSQTLDKTTAVKLFKLLEKYRPESPLAKKLRLKKI 122
Query: 175 XXXXXXXXXDTPTKKPNQIKQGTNTVTRLVVKKKASLVIIAHDVDPIELFKFL 227
P KKP+ + GTNTVT+L+ +KKA LV+IAHDVDP+EL FL
Sbjct: 123 AEAKAKGKDVEPKKKPSYVSAGTNTVTKLIEQKKAQLVVIAHDVDPLELVLFL 175
Score = 308 (113.5 bits), Expect = 1.4e-69, Sum P(3) = 1.4e-69
Identities = 62/104 (59%), Positives = 74/104 (71%)
Query: 221 IELFKFLEKYRPESWEAKKQRLXXXXXXXXXXXXDTPTKKPNQIKQGTNTVTRLVVKKKA 280
++LFK LEKYRPES AKK RL P KKP+ + GTNTVT+L+ +KKA
Sbjct: 98 VKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTKLIEQKKA 157
Query: 281 SLVIIAHDVDPIELVLFLPALCRKMGIPYCIVDSSDKANLAKLI 324
LV+IAHDVDP+ELVLFLPALCRKMG+PYCIV KA L +L+
Sbjct: 158 QLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKG--KARLGRLV 199
Score = 280 (103.6 bits), Expect = 1.4e-69, Sum P(3) = 1.4e-69
Identities = 49/61 (80%), Positives = 58/61 (95%)
Query: 38 LFEKKARNFGIGQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLKVPPPVHQFTQAVDKQ 97
LFEK+ +NFGIGQ++QPKRDLSRFV+WPKYIR+QRQKAVLQKRLKVPPP+HQF+Q +DK
Sbjct: 36 LFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLDKT 95
Query: 98 T 98
T
Sbjct: 96 T 96
Score = 148 (57.2 bits), Expect = 1.4e-69, Sum P(3) = 1.4e-69
Identities = 26/40 (65%), Positives = 34/40 (85%)
Query: 312 VDSSDKANLAKLIESVKVNFTDRYDEIRRQWGGGSLGSKS 351
VD++DKAN K++E+VK NF +R++EIRR WGGG LGSKS
Sbjct: 212 VDNNDKANFGKVLEAVKTNFNERHEEIRRHWGGGILGSKS 251
>WB|WBGene00004419 [details] [associations]
symbol:rpl-7A species:6239 "Caenorhabditis elegans"
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0005516 "calmodulin binding"
evidence=IPI] InterPro:IPR004037 PROSITE:PS01082 InterPro:IPR004038
InterPro:IPR001921 Pfam:PF01248 GO:GO:0009792 GO:GO:0042254
GO:GO:0005840 GO:GO:0040035 eggNOG:COG1358 InterPro:IPR018492
PRINTS:PR00881 HOGENOM:HOG000216644 KO:K02936 PANTHER:PTHR23105:SF1
PRINTS:PR00882 GeneTree:ENSGT00390000004753 OMA:QRSILYK
EMBL:FO081479 RefSeq:NP_741371.2 RefSeq:NP_741372.2
ProteinModelPortal:Q966C6 SMR:Q966C6 DIP:DIP-25472N
MINT:MINT-1106781 STRING:Q966C6 PaxDb:Q966C6 PRIDE:Q966C6
EnsemblMetazoa:Y24D9A.4a GeneID:177203 KEGG:cel:CELE_Y24D9A.4
UCSC:Y24D9A.4a CTD:177203 WormBase:Y24D9A.4a WormBase:Y24D9A.4c
InParanoid:Q966C6 NextBio:895770 Uniprot:Q966C6
Length = 265
Score = 420 (152.9 bits), Expect = 1.3e-49, Sum P(2) = 1.3e-49
Identities = 84/159 (52%), Positives = 112/159 (70%)
Query: 65 PKYIRIQRQKAVLQKRLKVPPPVHQFTQAVDKQTGQDIQPKRDLSRFVKWPKYIRIQRQK 124
P +IR Q Q +QK +K P+ + +A + GQDIQPK+D++RFVKWPKYIR+QRQ
Sbjct: 15 PAHIRAQTQ---VQKEVK--NPLFE-KRARNFNIGQDIQPKKDVTRFVKWPKYIRLQRQS 68
Query: 125 AVLQKRLKVPPPVHQFTQAVDKQTASQLFKFLEKYRPESWEAKKQRLXXXXXXXXXXXXD 184
A+LQKRLKVPP ++QF A+D Q+A Q FK L+KYRPES EAKK RL +
Sbjct: 69 AILQKRLKVPPTINQFRTALDSQSARQAFKLLDKYRPESTEAKKNRLRARAEARAAGKKE 128
Query: 185 TPTKKPNQIKQGTNTVTRLVVKKKASLVIIAHDVDPIEL 223
TK+PN ++ G NT+TRLV ++A LV+IAHDV+P+E+
Sbjct: 129 EVTKRPNTVRHGVNTITRLVETRRAQLVLIAHDVNPLEI 167
Score = 267 (99.0 bits), Expect = 5.2e-59, Sum P(3) = 5.2e-59
Identities = 51/103 (49%), Positives = 69/103 (66%)
Query: 222 ELFKFLEKYRPESWEAKKQRLXXXXXXXXXXXXDTPTKKPNQIKQGTNTVTRLVVKKKAS 281
+ FK L+KYRPES EAKK RL + TK+PN ++ G NT+TRLV ++A
Sbjct: 95 QAFKLLDKYRPESTEAKKNRLRARAEARAAGKKEEVTKRPNTVRHGVNTITRLVETRRAQ 154
Query: 282 LVIIAHDVDPIELVLFLPALCRKMGIPYCIVDSSDKANLAKLI 324
LV+IAHDV+P+E+VL LPALCRK +PY I+ KA+L ++
Sbjct: 155 LVLIAHDVNPLEIVLHLPALCRKYNVPYAIIKG--KASLGTVV 195
Score = 254 (94.5 bits), Expect = 5.2e-59, Sum P(3) = 5.2e-59
Identities = 45/63 (71%), Positives = 56/63 (88%)
Query: 38 LFEKKARNFGIGQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLKVPPPVHQFTQAVDKQ 97
LFEK+ARNF IGQDIQPK+D++RFVKWPKYIR+QRQ A+LQKRLKVPP ++QF A+D Q
Sbjct: 32 LFEKRARNFNIGQDIQPKKDVTRFVKWPKYIRLQRQSAILQKRLKVPPTINQFRTALDSQ 91
Query: 98 TGQ 100
+ +
Sbjct: 92 SAR 94
Score = 114 (45.2 bits), Expect = 5.2e-59, Sum P(3) = 5.2e-59
Identities = 20/40 (50%), Positives = 31/40 (77%)
Query: 312 VDSSDKANLAKLIESVKVNFTDRYDEIRRQWGGGSLGSKS 351
V+ DK+ L KL+E+V NF++R++EIR+ WGGG + +KS
Sbjct: 208 VNPEDKSALNKLVETVNNNFSERHEEIRKHWGGGVMSAKS 247
>UNIPROTKB|F1M394 [details] [associations]
symbol:F1M394 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR004037 PROSITE:PS01082 InterPro:IPR004038
InterPro:IPR001921 Pfam:PF01248 GO:GO:0042254 GO:GO:0030529
InterPro:IPR018492 PRINTS:PR00881 PRINTS:PR00882 IPI:IPI00373156
Ensembl:ENSRNOT00000036333 OMA:HKISHSI Uniprot:F1M394
Length = 264
Score = 363 (132.8 bits), Expect = 1.2e-45, Sum P(2) = 1.2e-45
Identities = 74/129 (57%), Positives = 91/129 (70%)
Query: 99 GQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLKVPPPVHQFTQAVDKQTASQLFKFLEK 158
GQDI PKRDL+RFVKWP+Y R+QRQ+A+L K LKVP ++QFTQA+D+QTA+QL K K
Sbjct: 46 GQDI-PKRDLTRFVKWPRYTRLQRQRAILYKWLKVPSAINQFTQALDRQTATQLLKLAHK 104
Query: 159 YRPESWEAKKQRLXXXXXXXXXXXXDTPTKKPNQIKQGTNTVTRLVVKKKASLVIIAHDV 218
YRPE+ + K+ D PTK+P ++ G NTVT LV KKA LV+IAHDV
Sbjct: 105 YRPETKQEKQS-----AEKKAAGKGDVPTKRPPVLRAGVNTVTTLVENKKAQLVVIAHDV 159
Query: 219 DPIELFKFL 227
DPIEL FL
Sbjct: 160 DPIELVVFL 168
Score = 263 (97.6 bits), Expect = 1.7e-58, Sum P(3) = 1.7e-58
Identities = 54/103 (52%), Positives = 67/103 (65%)
Query: 222 ELFKFLEKYRPESWEAKKQRLXXXXXXXXXXXXDTPTKKPNQIKQGTNTVTRLVVKKKAS 281
+L K KYRPE+ + K+ D PTK+P ++ G NTVT LV KKA
Sbjct: 97 QLLKLAHKYRPETKQEKQS-----AEKKAAGKGDVPTKRPPVLRAGVNTVTTLVENKKAQ 151
Query: 282 LVIIAHDVDPIELVLFLPALCRKMGIPYCIVDSSDKANLAKLI 324
LV+IAHDVDPIELV+FLPALCRKMG+PYCI+ KA L +L+
Sbjct: 152 LVVIAHDVDPIELVVFLPALCRKMGVPYCIIKG--KARLGRLV 192
Score = 234 (87.4 bits), Expect = 1.7e-58, Sum P(3) = 1.7e-58
Identities = 43/65 (66%), Positives = 55/65 (84%)
Query: 38 LFEKKARNFGIGQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLKVPPPVHQFTQAVDKQ 97
LFEK+ +NFGIGQDI PKRDL+RFVKWP+Y R+QRQ+A+L K LKVP ++QFTQA+D+Q
Sbjct: 35 LFEKRPKNFGIGQDI-PKRDLTRFVKWPRYTRLQRQRAILYKWLKVPSAINQFTQALDRQ 93
Query: 98 TGQDI 102
T +
Sbjct: 94 TATQL 98
Score = 133 (51.9 bits), Expect = 1.7e-58, Sum P(3) = 1.7e-58
Identities = 24/40 (60%), Positives = 31/40 (77%)
Query: 312 VDSSDKANLAKLIESVKVNFTDRYDEIRRQWGGGSLGSKS 351
V++ DK LAKL+E+V+ N+ DRYDEI R WGG +LG KS
Sbjct: 205 VNTEDKGALAKLVEAVRTNYNDRYDEICRHWGGNALGPKS 244
>ZFIN|ZDB-GENE-031001-9 [details] [associations]
symbol:rpl7a "ribosomal protein L7a" species:7955
"Danio rerio" [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] InterPro:IPR004037 PROSITE:PS01082
InterPro:IPR004038 InterPro:IPR001921 Pfam:PF01248
ZFIN:ZDB-GENE-031001-9 GO:GO:0042254 GO:GO:0005840 eggNOG:COG1358
InterPro:IPR018492 PRINTS:PR00881 HOGENOM:HOG000216644 KO:K02936
PRINTS:PR00882 CTD:6130 GeneTree:ENSGT00390000004753
HOVERGEN:HBG002936 OrthoDB:EOG4B8JDV EMBL:CU019641 EMBL:CR382323
EMBL:BC059533 EMBL:BC071352 IPI:IPI00481307 RefSeq:NP_956341.1
UniGene:Dr.53820 SMR:Q6PBZ1 STRING:Q6PBZ1
Ensembl:ENSDART00000004238 GeneID:337010 KEGG:dre:337010
InParanoid:Q6PBZ1 NextBio:20812027 Uniprot:Q6PBZ1
Length = 266
Score = 439 (159.6 bits), Expect = 6.1e-54, Sum P(2) = 6.1e-54
Identities = 83/129 (64%), Positives = 99/129 (76%)
Query: 99 GQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLKVPPPVHQFTQAVDKQTASQLFKFLEK 158
GQDIQPKRDL+RFVKWP+Y+R+QRQ+A+L KRLKVPP ++QFTQA+D+QTA+QLFK K
Sbjct: 42 GQDIQPKRDLTRFVKWPRYVRLQRQRAILYKRLKVPPAINQFTQALDRQTATQLFKLAHK 101
Query: 159 YRPESWEAKKQRLXXXXXXXXXXXXDTPTKKPNQIKQGTNTVTRLVVKKKASLVIIAHDV 218
YRPE+ KKQRL DTPTK+P ++ G NTVT LV KKA LV+IAHDV
Sbjct: 102 YRPETKHEKKQRLLARAEQKAAGKGDTPTKRPPVLRAGVNTVTTLVESKKAQLVVIAHDV 161
Query: 219 DPIELFKFL 227
DPIEL FL
Sbjct: 162 DPIELVVFL 170
Score = 306 (112.8 bits), Expect = 7.8e-54, Sum P(2) = 7.8e-54
Identities = 61/103 (59%), Positives = 71/103 (68%)
Query: 222 ELFKFLEKYRPESWEAKKQRLXXXXXXXXXXXXDTPTKKPNQIKQGTNTVTRLVVKKKAS 281
+LFK KYRPE+ KKQRL DTPTK+P ++ G NTVT LV KKA
Sbjct: 94 QLFKLAHKYRPETKHEKKQRLLARAEQKAAGKGDTPTKRPPVLRAGVNTVTTLVESKKAQ 153
Query: 282 LVIIAHDVDPIELVLFLPALCRKMGIPYCIVDSSDKANLAKLI 324
LV+IAHDVDPIELV+FLPALCRKMG+PYCIV KA L +L+
Sbjct: 154 LVVIAHDVDPIELVVFLPALCRKMGVPYCIVKG--KARLGRLV 194
Score = 268 (99.4 bits), Expect = 7.8e-54, Sum P(2) = 7.8e-54
Identities = 46/65 (70%), Positives = 59/65 (90%)
Query: 38 LFEKKARNFGIGQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLKVPPPVHQFTQAVDKQ 97
LFEK+ +NFGIGQDIQPKRDL+RFVKWP+Y+R+QRQ+A+L KRLKVPP ++QFTQA+D+Q
Sbjct: 31 LFEKRPKNFGIGQDIQPKRDLTRFVKWPRYVRLQRQRAILYKRLKVPPAINQFTQALDRQ 90
Query: 98 TGQDI 102
T +
Sbjct: 91 TATQL 95
Score = 136 (52.9 bits), Expect = 6.1e-54, Sum P(2) = 6.1e-54
Identities = 25/45 (55%), Positives = 32/45 (71%)
Query: 307 IPYCIVDSSDKANLAKLIESVKVNFTDRYDEIRRQWGGGSLGSKS 351
I + + DKA LAKL+E++K N+ DRY+EIRR WGG LG KS
Sbjct: 202 IAFTQTNPEDKAALAKLVEAIKTNYNDRYEEIRRHWGGNVLGPKS 246
>RGD|2320354 [details] [associations]
symbol:LOC100361311 "ribosomal protein L7a-like" species:10116
"Rattus norvegicus" [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR004037 PROSITE:PS01082 InterPro:IPR004038
InterPro:IPR001921 Pfam:PF01248 RGD:2320354 GO:GO:0042254
GO:GO:0042788 GO:GO:0022625 InterPro:IPR018492 PRINTS:PR00881
KO:K02936 PRINTS:PR00882 GeneTree:ENSGT00390000004753
OrthoDB:EOG4B8JDV IPI:IPI00947666 RefSeq:XP_002728568.1
RefSeq:XP_003753075.1 Ensembl:ENSRNOT00000051207 GeneID:100361311
KEGG:rno:100361311 UCSC:RGD:2320354 Uniprot:D3ZU22
Length = 266
Score = 432 (157.1 bits), Expect = 9.9e-54, Sum P(2) = 9.9e-54
Identities = 82/129 (63%), Positives = 98/129 (75%)
Query: 99 GQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLKVPPPVHQFTQAVDKQTASQLFKFLEK 158
GQDIQPKRDL+RFVKWP+YIR+QRQ+A+L KRLKVPP ++QFTQA+D+QTA+QL K K
Sbjct: 42 GQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALDRQTATQLLKLAHK 101
Query: 159 YRPESWEAKKQRLXXXXXXXXXXXXDTPTKKPNQIKQGTNTVTRLVVKKKASLVIIAHDV 218
YRPE+ + KKQRL D PTK+P ++ G NTVT LV KKA LV+IAHDV
Sbjct: 102 YRPETKQEKKQRLLARAEKKAAGKGDVPTKRPPVLRAGVNTVTTLVENKKAQLVVIAHDV 161
Query: 219 DPIELFKFL 227
DPIEL FL
Sbjct: 162 DPIELVDFL 170
Score = 291 (107.5 bits), Expect = 2.3e-52, Sum P(2) = 2.3e-52
Identities = 58/103 (56%), Positives = 69/103 (66%)
Query: 222 ELFKFLEKYRPESWEAKKQRLXXXXXXXXXXXXDTPTKKPNQIKQGTNTVTRLVVKKKAS 281
+L K KYRPE+ + KKQRL D PTK+P ++ G NTVT LV KKA
Sbjct: 94 QLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPTKRPPVLRAGVNTVTTLVENKKAQ 153
Query: 282 LVIIAHDVDPIELVLFLPALCRKMGIPYCIVDSSDKANLAKLI 324
LV+IAHDVDPIELV FLPALCRKMG+PYCI+ KA L +L+
Sbjct: 154 LVVIAHDVDPIELVDFLPALCRKMGVPYCIIKG--KARLGRLV 194
Score = 269 (99.8 bits), Expect = 2.3e-52, Sum P(2) = 2.3e-52
Identities = 47/65 (72%), Positives = 59/65 (90%)
Query: 38 LFEKKARNFGIGQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLKVPPPVHQFTQAVDKQ 97
LFEK+ +NFGIGQDIQPKRDL+RFVKWP+YIR+QRQ+A+L KRLKVPP ++QFTQA+D+Q
Sbjct: 31 LFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALDRQ 90
Query: 98 TGQDI 102
T +
Sbjct: 91 TATQL 95
Score = 141 (54.7 bits), Expect = 9.9e-54, Sum P(2) = 9.9e-54
Identities = 25/45 (55%), Positives = 33/45 (73%)
Query: 307 IPYCIVDSSDKANLAKLIESVKVNFTDRYDEIRRQWGGGSLGSKS 351
+ + V+S DK LAKL+E+++ N+ DRYDEIRR WGG LG KS
Sbjct: 202 VAFTQVNSEDKGALAKLVEAIRTNYNDRYDEIRRHWGGNVLGPKS 246
>UNIPROTKB|Q2TBQ5 [details] [associations]
symbol:RPL7A "60S ribosomal protein L7a" species:9913 "Bos
taurus" [GO:0042788 "polysomal ribosome" evidence=IEA] [GO:0022625
"cytosolic large ribosomal subunit" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] InterPro:IPR004037 PROSITE:PS01082 InterPro:IPR004038
InterPro:IPR001921 Pfam:PF01248 GO:GO:0042254 GO:GO:0042788
GO:GO:0022625 eggNOG:COG1358 InterPro:IPR018492 PRINTS:PR00881
HOGENOM:HOG000216644 KO:K02936 PRINTS:PR00882 EMBL:BT030549
EMBL:BC109810 IPI:IPI00691853 RefSeq:NP_001035610.1
UniGene:Bt.13580 ProteinModelPortal:Q2TBQ5 SMR:Q2TBQ5 STRING:Q2TBQ5
PRIDE:Q2TBQ5 Ensembl:ENSBTAT00000015358 GeneID:513128
KEGG:bta:513128 CTD:6130 GeneTree:ENSGT00390000004753
HOVERGEN:HBG002936 InParanoid:Q2TBQ5 OMA:QRSILYK OrthoDB:EOG4B8JDV
NextBio:20870714 Uniprot:Q2TBQ5
Length = 266
Score = 431 (156.8 bits), Expect = 9.9e-54, Sum P(2) = 9.9e-54
Identities = 82/129 (63%), Positives = 98/129 (75%)
Query: 99 GQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLKVPPPVHQFTQAVDKQTASQLFKFLEK 158
GQDIQPKRDL+RFVKWP+YIR+QRQ+A+L KRLKVPP ++QFTQA+D+QTA+QL K K
Sbjct: 42 GQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALDRQTATQLLKLAHK 101
Query: 159 YRPESWEAKKQRLXXXXXXXXXXXXDTPTKKPNQIKQGTNTVTRLVVKKKASLVIIAHDV 218
YRPE+ + KKQRL D PTK+P ++ G NTVT LV KKA LV+IAHDV
Sbjct: 102 YRPETKQEKKQRLLARAEKKAAGKGDVPTKRPPVLRAGVNTVTTLVENKKAQLVVIAHDV 161
Query: 219 DPIELFKFL 227
DPIEL FL
Sbjct: 162 DPIELVVFL 170
Score = 296 (109.3 bits), Expect = 6.9e-53, Sum P(2) = 6.9e-53
Identities = 58/103 (56%), Positives = 70/103 (67%)
Query: 222 ELFKFLEKYRPESWEAKKQRLXXXXXXXXXXXXDTPTKKPNQIKQGTNTVTRLVVKKKAS 281
+L K KYRPE+ + KKQRL D PTK+P ++ G NTVT LV KKA
Sbjct: 94 QLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPTKRPPVLRAGVNTVTTLVENKKAQ 153
Query: 282 LVIIAHDVDPIELVLFLPALCRKMGIPYCIVDSSDKANLAKLI 324
LV+IAHDVDPIELV+FLPALCRKMG+PYCI+ KA L +L+
Sbjct: 154 LVVIAHDVDPIELVVFLPALCRKMGVPYCIIKG--KARLGRLV 194
Score = 269 (99.8 bits), Expect = 6.9e-53, Sum P(2) = 6.9e-53
Identities = 47/65 (72%), Positives = 59/65 (90%)
Query: 38 LFEKKARNFGIGQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLKVPPPVHQFTQAVDKQ 97
LFEK+ +NFGIGQDIQPKRDL+RFVKWP+YIR+QRQ+A+L KRLKVPP ++QFTQA+D+Q
Sbjct: 31 LFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALDRQ 90
Query: 98 TGQDI 102
T +
Sbjct: 91 TATQL 95
Score = 142 (55.0 bits), Expect = 9.9e-54, Sum P(2) = 9.9e-54
Identities = 25/45 (55%), Positives = 34/45 (75%)
Query: 307 IPYCIVDSSDKANLAKLIESVKVNFTDRYDEIRRQWGGGSLGSKS 351
+ + V+S DK+ LAKL+E+++ N+ DRYDEIRR WGG LG KS
Sbjct: 202 VAFTQVNSEDKSALAKLVEAIRTNYNDRYDEIRRHWGGNVLGPKS 246
>UNIPROTKB|F2Z4P2 [details] [associations]
symbol:RPL7A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR004037 PROSITE:PS01082 InterPro:IPR004038
InterPro:IPR001921 Pfam:PF01248 GO:GO:0042254 GO:GO:0030529
InterPro:IPR018492 PRINTS:PR00881 PRINTS:PR00882
GeneTree:ENSGT00390000004753 OMA:QRSILYK EMBL:AAEX03006771
UniGene:Cfa.46936 ProteinModelPortal:F2Z4P2 PRIDE:F2Z4P2
Ensembl:ENSCAFT00000031419 NextBio:20817183 Uniprot:F2Z4P2
Length = 266
Score = 431 (156.8 bits), Expect = 1.3e-53, Sum P(2) = 1.3e-53
Identities = 82/129 (63%), Positives = 98/129 (75%)
Query: 99 GQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLKVPPPVHQFTQAVDKQTASQLFKFLEK 158
GQDIQPKRDL+RFVKWP+YIR+QRQ+A+L KRLKVPP ++QFTQA+D+QTA+QL K K
Sbjct: 42 GQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALDRQTATQLLKLAHK 101
Query: 159 YRPESWEAKKQRLXXXXXXXXXXXXDTPTKKPNQIKQGTNTVTRLVVKKKASLVIIAHDV 218
YRPE+ + KKQRL D PTK+P ++ G NTVT LV KKA LV+IAHDV
Sbjct: 102 YRPETKQEKKQRLLARAEKKAAGKGDVPTKRPPVLRAGVNTVTTLVENKKAQLVVIAHDV 161
Query: 219 DPIELFKFL 227
DPIEL FL
Sbjct: 162 DPIELVVFL 170
Score = 296 (109.3 bits), Expect = 6.9e-53, Sum P(2) = 6.9e-53
Identities = 58/103 (56%), Positives = 70/103 (67%)
Query: 222 ELFKFLEKYRPESWEAKKQRLXXXXXXXXXXXXDTPTKKPNQIKQGTNTVTRLVVKKKAS 281
+L K KYRPE+ + KKQRL D PTK+P ++ G NTVT LV KKA
Sbjct: 94 QLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPTKRPPVLRAGVNTVTTLVENKKAQ 153
Query: 282 LVIIAHDVDPIELVLFLPALCRKMGIPYCIVDSSDKANLAKLI 324
LV+IAHDVDPIELV+FLPALCRKMG+PYCI+ KA L +L+
Sbjct: 154 LVVIAHDVDPIELVVFLPALCRKMGVPYCIIKG--KARLGRLV 194
Score = 269 (99.8 bits), Expect = 6.9e-53, Sum P(2) = 6.9e-53
Identities = 47/65 (72%), Positives = 59/65 (90%)
Query: 38 LFEKKARNFGIGQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLKVPPPVHQFTQAVDKQ 97
LFEK+ +NFGIGQDIQPKRDL+RFVKWP+YIR+QRQ+A+L KRLKVPP ++QFTQA+D+Q
Sbjct: 31 LFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALDRQ 90
Query: 98 TGQDI 102
T +
Sbjct: 91 TATQL 95
Score = 141 (54.7 bits), Expect = 1.3e-53, Sum P(2) = 1.3e-53
Identities = 25/45 (55%), Positives = 33/45 (73%)
Query: 307 IPYCIVDSSDKANLAKLIESVKVNFTDRYDEIRRQWGGGSLGSKS 351
+ + V+S DK LAKL+E+++ N+ DRYDEIRR WGG LG KS
Sbjct: 202 VAFTQVNSEDKGALAKLVEAIRTNYNDRYDEIRRHWGGNVLGPKS 246
>UNIPROTKB|P62424 [details] [associations]
symbol:RPL7A "60S ribosomal protein L7a" species:9606 "Homo
sapiens" [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0006412 "translation" evidence=NAS;TAS] [GO:0003735 "structural
constituent of ribosome" evidence=NAS] [GO:0022625 "cytosolic large
ribosomal subunit" evidence=IDA] [GO:0042788 "polysomal ribosome"
evidence=IDA] [GO:0003723 "RNA binding" evidence=TAS] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0006413 "translational initiation" evidence=TAS] [GO:0006414
"translational elongation" evidence=TAS] [GO:0006415 "translational
termination" evidence=TAS] [GO:0006614 "SRP-dependent
cotranslational protein targeting to membrane" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0019058 "viral infectious cycle" evidence=TAS] [GO:0019083
"viral transcription" evidence=TAS] [GO:0044267 "cellular protein
metabolic process" evidence=TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0016020 "membrane" evidence=IDA]
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_17015
InterPro:IPR004037 PROSITE:PS01082 InterPro:IPR004038
InterPro:IPR001921 Pfam:PF01248 Reactome:REACT_116125 GO:GO:0016020
GO:GO:0000184 GO:GO:0006413 EMBL:CH471090 GO:GO:0042254
GO:GO:0003723 GO:GO:0042788 GO:GO:0003735 EMBL:AL158826
GO:GO:0006415 GO:GO:0006414 Reactome:REACT_1762 GO:GO:0006614
GO:GO:0022625 GO:GO:0019083 eggNOG:COG1358 InterPro:IPR018492
PRINTS:PR00881 HOGENOM:HOG000216644 KO:K02936 PRINTS:PR00882
CTD:6130 HOVERGEN:HBG002936 OMA:QRSILYK OrthoDB:EOG4B8JDV
ChiTaRS:RPL7A EMBL:X06705 EMBL:X52138 EMBL:X61923 EMBL:M36072
EMBL:AK291123 EMBL:AK311743 EMBL:BC005128 EMBL:BC021979
EMBL:BC023594 EMBL:BC023624 EMBL:BC071900 EMBL:BC071901
EMBL:BC073802 EMBL:BC105290 IPI:IPI00299573 PIR:S19717
RefSeq:NP_000963.1 UniGene:Hs.499839 ProteinModelPortal:P62424
SMR:P62424 IntAct:P62424 MINT:MINT-1149515 STRING:P62424
PhosphoSite:P62424 DMDM:54039239 SWISS-2DPAGE:P62424 PaxDb:P62424
PRIDE:P62424 DNASU:6130 Ensembl:ENST00000323345
Ensembl:ENST00000564892 GeneID:6130 KEGG:hsa:6130 UCSC:uc004cde.1
GeneCards:GC09P136215 HGNC:HGNC:10364 HPA:HPA046794 MIM:185640
neXtProt:NX_P62424 PharmGKB:PA34760 InParanoid:P62424
PhylomeDB:P62424 GenomeRNAi:6130 NextBio:23809 ArrayExpress:P62424
Bgee:P62424 CleanEx:HS_RPL7A Genevestigator:P62424
GermOnline:ENSG00000148303 Uniprot:P62424
Length = 266
Score = 431 (156.8 bits), Expect = 1.3e-53, Sum P(2) = 1.3e-53
Identities = 82/129 (63%), Positives = 98/129 (75%)
Query: 99 GQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLKVPPPVHQFTQAVDKQTASQLFKFLEK 158
GQDIQPKRDL+RFVKWP+YIR+QRQ+A+L KRLKVPP ++QFTQA+D+QTA+QL K K
Sbjct: 42 GQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALDRQTATQLLKLAHK 101
Query: 159 YRPESWEAKKQRLXXXXXXXXXXXXDTPTKKPNQIKQGTNTVTRLVVKKKASLVIIAHDV 218
YRPE+ + KKQRL D PTK+P ++ G NTVT LV KKA LV+IAHDV
Sbjct: 102 YRPETKQEKKQRLLARAEKKAAGKGDVPTKRPPVLRAGVNTVTTLVENKKAQLVVIAHDV 161
Query: 219 DPIELFKFL 227
DPIEL FL
Sbjct: 162 DPIELVVFL 170
Score = 296 (109.3 bits), Expect = 6.9e-53, Sum P(2) = 6.9e-53
Identities = 58/103 (56%), Positives = 70/103 (67%)
Query: 222 ELFKFLEKYRPESWEAKKQRLXXXXXXXXXXXXDTPTKKPNQIKQGTNTVTRLVVKKKAS 281
+L K KYRPE+ + KKQRL D PTK+P ++ G NTVT LV KKA
Sbjct: 94 QLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPTKRPPVLRAGVNTVTTLVENKKAQ 153
Query: 282 LVIIAHDVDPIELVLFLPALCRKMGIPYCIVDSSDKANLAKLI 324
LV+IAHDVDPIELV+FLPALCRKMG+PYCI+ KA L +L+
Sbjct: 154 LVVIAHDVDPIELVVFLPALCRKMGVPYCIIKG--KARLGRLV 194
Score = 269 (99.8 bits), Expect = 6.9e-53, Sum P(2) = 6.9e-53
Identities = 47/65 (72%), Positives = 59/65 (90%)
Query: 38 LFEKKARNFGIGQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLKVPPPVHQFTQAVDKQ 97
LFEK+ +NFGIGQDIQPKRDL+RFVKWP+YIR+QRQ+A+L KRLKVPP ++QFTQA+D+Q
Sbjct: 31 LFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALDRQ 90
Query: 98 TGQDI 102
T +
Sbjct: 91 TATQL 95
Score = 141 (54.7 bits), Expect = 1.3e-53, Sum P(2) = 1.3e-53
Identities = 25/45 (55%), Positives = 33/45 (73%)
Query: 307 IPYCIVDSSDKANLAKLIESVKVNFTDRYDEIRRQWGGGSLGSKS 351
+ + V+S DK LAKL+E+++ N+ DRYDEIRR WGG LG KS
Sbjct: 202 VAFTQVNSEDKGALAKLVEAIRTNYNDRYDEIRRHWGGNVLGPKS 246
>RGD|1307586 [details] [associations]
symbol:Rpl7a "ribosomal protein L7a" species:10116 "Rattus
norvegicus" [GO:0005840 "ribosome" evidence=IEA] [GO:0016020
"membrane" evidence=ISO] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=ISO] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0042788 "polysomal ribosome" evidence=ISO] InterPro:IPR004037
PROSITE:PS01082 InterPro:IPR004038 InterPro:IPR001921 Pfam:PF01248
RGD:1307586 GO:GO:0042254 GO:GO:0005840 eggNOG:COG1358
InterPro:IPR018492 PRINTS:PR00881 HOGENOM:HOG000216644 KO:K02936
PRINTS:PR00882 CTD:6130 HOVERGEN:HBG002936 OrthoDB:EOG4B8JDV
EMBL:X15013 IPI:IPI00363949 PIR:S04712 RefSeq:NP_001107863.1
RefSeq:XP_003749479.1 UniGene:Rn.144857 ProteinModelPortal:P62425
SMR:P62425 IntAct:P62425 STRING:P62425 PhosphoSite:P62425
PRIDE:P62425 GeneID:100911966 GeneID:296596 KEGG:rno:100911966
KEGG:rno:296596 UCSC:RGD:1307586 InParanoid:P62425 NextBio:641466
ArrayExpress:P62425 Genevestigator:P62425
GermOnline:ENSRNOG00000005071 Uniprot:P62425
Length = 266
Score = 431 (156.8 bits), Expect = 1.3e-53, Sum P(2) = 1.3e-53
Identities = 82/129 (63%), Positives = 98/129 (75%)
Query: 99 GQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLKVPPPVHQFTQAVDKQTASQLFKFLEK 158
GQDIQPKRDL+RFVKWP+YIR+QRQ+A+L KRLKVPP ++QFTQA+D+QTA+QL K K
Sbjct: 42 GQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALDRQTATQLLKLAHK 101
Query: 159 YRPESWEAKKQRLXXXXXXXXXXXXDTPTKKPNQIKQGTNTVTRLVVKKKASLVIIAHDV 218
YRPE+ + KKQRL D PTK+P ++ G NTVT LV KKA LV+IAHDV
Sbjct: 102 YRPETKQEKKQRLLARAEKKAAGKGDVPTKRPPVLRAGVNTVTTLVENKKAQLVVIAHDV 161
Query: 219 DPIELFKFL 227
DPIEL FL
Sbjct: 162 DPIELVVFL 170
Score = 296 (109.3 bits), Expect = 6.9e-53, Sum P(2) = 6.9e-53
Identities = 58/103 (56%), Positives = 70/103 (67%)
Query: 222 ELFKFLEKYRPESWEAKKQRLXXXXXXXXXXXXDTPTKKPNQIKQGTNTVTRLVVKKKAS 281
+L K KYRPE+ + KKQRL D PTK+P ++ G NTVT LV KKA
Sbjct: 94 QLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPTKRPPVLRAGVNTVTTLVENKKAQ 153
Query: 282 LVIIAHDVDPIELVLFLPALCRKMGIPYCIVDSSDKANLAKLI 324
LV+IAHDVDPIELV+FLPALCRKMG+PYCI+ KA L +L+
Sbjct: 154 LVVIAHDVDPIELVVFLPALCRKMGVPYCIIKG--KARLGRLV 194
Score = 269 (99.8 bits), Expect = 6.9e-53, Sum P(2) = 6.9e-53
Identities = 47/65 (72%), Positives = 59/65 (90%)
Query: 38 LFEKKARNFGIGQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLKVPPPVHQFTQAVDKQ 97
LFEK+ +NFGIGQDIQPKRDL+RFVKWP+YIR+QRQ+A+L KRLKVPP ++QFTQA+D+Q
Sbjct: 31 LFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALDRQ 90
Query: 98 TGQDI 102
T +
Sbjct: 91 TATQL 95
Score = 141 (54.7 bits), Expect = 1.3e-53, Sum P(2) = 1.3e-53
Identities = 25/45 (55%), Positives = 33/45 (73%)
Query: 307 IPYCIVDSSDKANLAKLIESVKVNFTDRYDEIRRQWGGGSLGSKS 351
+ + V+S DK LAKL+E+++ N+ DRYDEIRR WGG LG KS
Sbjct: 202 VAFTQVNSEDKGALAKLVEAIRTNYNDRYDEIRRHWGGNVLGPKS 246
>UNIPROTKB|P62425 [details] [associations]
symbol:Rpl7a "60S ribosomal protein L7a" species:10116
"Rattus norvegicus" [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR004037 PROSITE:PS01082 InterPro:IPR004038
InterPro:IPR001921 Pfam:PF01248 RGD:1307586 GO:GO:0042254
GO:GO:0005840 eggNOG:COG1358 InterPro:IPR018492 PRINTS:PR00881
HOGENOM:HOG000216644 KO:K02936 PRINTS:PR00882 CTD:6130
HOVERGEN:HBG002936 OrthoDB:EOG4B8JDV EMBL:X15013 IPI:IPI00363949
PIR:S04712 RefSeq:NP_001107863.1 RefSeq:XP_003749479.1
UniGene:Rn.144857 ProteinModelPortal:P62425 SMR:P62425
IntAct:P62425 STRING:P62425 PhosphoSite:P62425 PRIDE:P62425
GeneID:100911966 GeneID:296596 KEGG:rno:100911966 KEGG:rno:296596
UCSC:RGD:1307586 InParanoid:P62425 NextBio:641466
ArrayExpress:P62425 Genevestigator:P62425
GermOnline:ENSRNOG00000005071 Uniprot:P62425
Length = 266
Score = 431 (156.8 bits), Expect = 1.3e-53, Sum P(2) = 1.3e-53
Identities = 82/129 (63%), Positives = 98/129 (75%)
Query: 99 GQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLKVPPPVHQFTQAVDKQTASQLFKFLEK 158
GQDIQPKRDL+RFVKWP+YIR+QRQ+A+L KRLKVPP ++QFTQA+D+QTA+QL K K
Sbjct: 42 GQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALDRQTATQLLKLAHK 101
Query: 159 YRPESWEAKKQRLXXXXXXXXXXXXDTPTKKPNQIKQGTNTVTRLVVKKKASLVIIAHDV 218
YRPE+ + KKQRL D PTK+P ++ G NTVT LV KKA LV+IAHDV
Sbjct: 102 YRPETKQEKKQRLLARAEKKAAGKGDVPTKRPPVLRAGVNTVTTLVENKKAQLVVIAHDV 161
Query: 219 DPIELFKFL 227
DPIEL FL
Sbjct: 162 DPIELVVFL 170
Score = 296 (109.3 bits), Expect = 6.9e-53, Sum P(2) = 6.9e-53
Identities = 58/103 (56%), Positives = 70/103 (67%)
Query: 222 ELFKFLEKYRPESWEAKKQRLXXXXXXXXXXXXDTPTKKPNQIKQGTNTVTRLVVKKKAS 281
+L K KYRPE+ + KKQRL D PTK+P ++ G NTVT LV KKA
Sbjct: 94 QLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPTKRPPVLRAGVNTVTTLVENKKAQ 153
Query: 282 LVIIAHDVDPIELVLFLPALCRKMGIPYCIVDSSDKANLAKLI 324
LV+IAHDVDPIELV+FLPALCRKMG+PYCI+ KA L +L+
Sbjct: 154 LVVIAHDVDPIELVVFLPALCRKMGVPYCIIKG--KARLGRLV 194
Score = 269 (99.8 bits), Expect = 6.9e-53, Sum P(2) = 6.9e-53
Identities = 47/65 (72%), Positives = 59/65 (90%)
Query: 38 LFEKKARNFGIGQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLKVPPPVHQFTQAVDKQ 97
LFEK+ +NFGIGQDIQPKRDL+RFVKWP+YIR+QRQ+A+L KRLKVPP ++QFTQA+D+Q
Sbjct: 31 LFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALDRQ 90
Query: 98 TGQDI 102
T +
Sbjct: 91 TATQL 95
Score = 141 (54.7 bits), Expect = 1.3e-53, Sum P(2) = 1.3e-53
Identities = 25/45 (55%), Positives = 33/45 (73%)
Query: 307 IPYCIVDSSDKANLAKLIESVKVNFTDRYDEIRRQWGGGSLGSKS 351
+ + V+S DK LAKL+E+++ N+ DRYDEIRR WGG LG KS
Sbjct: 202 VAFTQVNSEDKGALAKLVEAIRTNYNDRYDEIRRHWGGNVLGPKS 246
>UNIPROTKB|F1NHA8 [details] [associations]
symbol:RPL7A "60S ribosomal protein L7a" species:9031
"Gallus gallus" [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0022625 "cytosolic large
ribosomal subunit" evidence=IEA] [GO:0042788 "polysomal ribosome"
evidence=IEA] InterPro:IPR004037 PROSITE:PS01082 InterPro:IPR004038
InterPro:IPR001921 Pfam:PF01248 GO:GO:0042254 GO:GO:0042788
GO:GO:0022625 InterPro:IPR018492 PRINTS:PR00881 PRINTS:PR00882
GeneTree:ENSGT00390000004753 OMA:QRSILYK EMBL:AADN02026482
IPI:IPI00579541 Ensembl:ENSGALT00000021881 ArrayExpress:F1NHA8
Uniprot:F1NHA8
Length = 270
Score = 429 (156.1 bits), Expect = 2.6e-53, Sum P(2) = 2.6e-53
Identities = 81/129 (62%), Positives = 99/129 (76%)
Query: 99 GQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLKVPPPVHQFTQAVDKQTASQLFKFLEK 158
GQDIQPKRDL+RFVKWP+YIR+QRQ+++L KRLKVPP ++QF+QA+D+QTA+QL K K
Sbjct: 46 GQDIQPKRDLTRFVKWPRYIRLQRQRSILYKRLKVPPAINQFSQALDRQTATQLLKLAHK 105
Query: 159 YRPESWEAKKQRLXXXXXXXXXXXXDTPTKKPNQIKQGTNTVTRLVVKKKASLVIIAHDV 218
YRPE+ + KKQRL DTPTK+P ++ G NTVT LV KKA LV+IAHDV
Sbjct: 106 YRPETKQEKKQRLLARAEQKAAGKGDTPTKRPPVLRAGVNTVTTLVENKKAQLVVIAHDV 165
Query: 219 DPIELFKFL 227
DPIEL FL
Sbjct: 166 DPIELVVFL 174
Score = 305 (112.4 bits), Expect = 4.2e-53, Sum P(2) = 4.2e-53
Identities = 60/103 (58%), Positives = 72/103 (69%)
Query: 222 ELFKFLEKYRPESWEAKKQRLXXXXXXXXXXXXDTPTKKPNQIKQGTNTVTRLVVKKKAS 281
+L K KYRPE+ + KKQRL DTPTK+P ++ G NTVT LV KKA
Sbjct: 98 QLLKLAHKYRPETKQEKKQRLLARAEQKAAGKGDTPTKRPPVLRAGVNTVTTLVENKKAQ 157
Query: 282 LVIIAHDVDPIELVLFLPALCRKMGIPYCIVDSSDKANLAKLI 324
LV+IAHDVDPIELV+FLPALCRKMG+PYCI+ S KA L +L+
Sbjct: 158 LVVIAHDVDPIELVVFLPALCRKMGVPYCIIKS--KARLGRLV 198
Score = 262 (97.3 bits), Expect = 4.2e-53, Sum P(2) = 4.2e-53
Identities = 45/65 (69%), Positives = 59/65 (90%)
Query: 38 LFEKKARNFGIGQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLKVPPPVHQFTQAVDKQ 97
LFEK+ +NFGIGQDIQPKRDL+RFVKWP+YIR+QRQ+++L KRLKVPP ++QF+QA+D+Q
Sbjct: 35 LFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRSILYKRLKVPPAINQFSQALDRQ 94
Query: 98 TGQDI 102
T +
Sbjct: 95 TATQL 99
Score = 140 (54.3 bits), Expect = 2.6e-53, Sum P(2) = 2.6e-53
Identities = 26/45 (57%), Positives = 32/45 (71%)
Query: 307 IPYCIVDSSDKANLAKLIESVKVNFTDRYDEIRRQWGGGSLGSKS 351
+ + V+ DK LAKL+E+VK N+ DRYDEIRR WGG LG KS
Sbjct: 206 VAFTQVNPEDKGALAKLVEAVKTNYNDRYDEIRRHWGGNVLGPKS 250
>UNIPROTKB|F2Z4L5 [details] [associations]
symbol:RPL7A "60S ribosomal protein L7a" species:9031
"Gallus gallus" [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0022625 "cytosolic large
ribosomal subunit" evidence=IEA] [GO:0042788 "polysomal ribosome"
evidence=IEA] InterPro:IPR004037 PROSITE:PS01082 InterPro:IPR004038
InterPro:IPR001921 Pfam:PF01248 GO:GO:0042254 GO:GO:0042788
GO:GO:0022625 InterPro:IPR018492 PRINTS:PR00881 PRINTS:PR00882
GeneTree:ENSGT00390000004753 IPI:IPI00576428 UniGene:Gga.4080
NextBio:20820506 EMBL:AADN02026482 ProteinModelPortal:F2Z4L5
PRIDE:F2Z4L5 Ensembl:ENSGALT00000039254 ArrayExpress:F2Z4L5
Uniprot:F2Z4L5
Length = 265
Score = 429 (156.1 bits), Expect = 2.6e-53, Sum P(2) = 2.6e-53
Identities = 81/129 (62%), Positives = 99/129 (76%)
Query: 99 GQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLKVPPPVHQFTQAVDKQTASQLFKFLEK 158
GQDIQPKRDL+RFVKWP+YIR+QRQ+++L KRLKVPP ++QF+QA+D+QTA+QL K K
Sbjct: 41 GQDIQPKRDLTRFVKWPRYIRLQRQRSILYKRLKVPPAINQFSQALDRQTATQLLKLAHK 100
Query: 159 YRPESWEAKKQRLXXXXXXXXXXXXDTPTKKPNQIKQGTNTVTRLVVKKKASLVIIAHDV 218
YRPE+ + KKQRL DTPTK+P ++ G NTVT LV KKA LV+IAHDV
Sbjct: 101 YRPETKQEKKQRLLARAEQKAAGKGDTPTKRPPVLRAGVNTVTTLVENKKAQLVVIAHDV 160
Query: 219 DPIELFKFL 227
DPIEL FL
Sbjct: 161 DPIELVVFL 169
Score = 305 (112.4 bits), Expect = 4.2e-53, Sum P(2) = 4.2e-53
Identities = 60/103 (58%), Positives = 72/103 (69%)
Query: 222 ELFKFLEKYRPESWEAKKQRLXXXXXXXXXXXXDTPTKKPNQIKQGTNTVTRLVVKKKAS 281
+L K KYRPE+ + KKQRL DTPTK+P ++ G NTVT LV KKA
Sbjct: 93 QLLKLAHKYRPETKQEKKQRLLARAEQKAAGKGDTPTKRPPVLRAGVNTVTTLVENKKAQ 152
Query: 282 LVIIAHDVDPIELVLFLPALCRKMGIPYCIVDSSDKANLAKLI 324
LV+IAHDVDPIELV+FLPALCRKMG+PYCI+ S KA L +L+
Sbjct: 153 LVVIAHDVDPIELVVFLPALCRKMGVPYCIIKS--KARLGRLV 193
Score = 262 (97.3 bits), Expect = 4.2e-53, Sum P(2) = 4.2e-53
Identities = 45/65 (69%), Positives = 59/65 (90%)
Query: 38 LFEKKARNFGIGQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLKVPPPVHQFTQAVDKQ 97
LFEK+ +NFGIGQDIQPKRDL+RFVKWP+YIR+QRQ+++L KRLKVPP ++QF+QA+D+Q
Sbjct: 30 LFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRSILYKRLKVPPAINQFSQALDRQ 89
Query: 98 TGQDI 102
T +
Sbjct: 90 TATQL 94
Score = 140 (54.3 bits), Expect = 2.6e-53, Sum P(2) = 2.6e-53
Identities = 26/45 (57%), Positives = 32/45 (71%)
Query: 307 IPYCIVDSSDKANLAKLIESVKVNFTDRYDEIRRQWGGGSLGSKS 351
+ + V+ DK LAKL+E+VK N+ DRYDEIRR WGG LG KS
Sbjct: 201 VAFTQVNPEDKGALAKLVEAVKTNYNDRYDEIRRHWGGNVLGPKS 245
>UNIPROTKB|P32429 [details] [associations]
symbol:RPL7A "60S ribosomal protein L7a" species:9031
"Gallus gallus" [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] InterPro:IPR004037
PROSITE:PS01082 InterPro:IPR004038 InterPro:IPR001921 Pfam:PF01248
GO:GO:0042254 GO:GO:0005840 EMBL:AB050009 eggNOG:COG1358
InterPro:IPR018492 PRINTS:PR00881 HOGENOM:HOG000216644 KO:K02936
PRINTS:PR00882 CTD:6130 HOVERGEN:HBG002936 OrthoDB:EOG4B8JDV
EMBL:X62640 EMBL:D14522 IPI:IPI00576428 PIR:A46032
RefSeq:NP_001004379.1 UniGene:Gga.4080 ProteinModelPortal:P32429
SMR:P32429 STRING:P32429 PRIDE:P32429 GeneID:417158 KEGG:gga:417158
InParanoid:P32429 NextBio:20820506 ArrayExpress:P32429
Uniprot:P32429
Length = 266
Score = 429 (156.1 bits), Expect = 2.6e-53, Sum P(2) = 2.6e-53
Identities = 81/129 (62%), Positives = 99/129 (76%)
Query: 99 GQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLKVPPPVHQFTQAVDKQTASQLFKFLEK 158
GQDIQPKRDL+RFVKWP+YIR+QRQ+++L KRLKVPP ++QF+QA+D+QTA+QL K K
Sbjct: 42 GQDIQPKRDLTRFVKWPRYIRLQRQRSILYKRLKVPPAINQFSQALDRQTATQLLKLAHK 101
Query: 159 YRPESWEAKKQRLXXXXXXXXXXXXDTPTKKPNQIKQGTNTVTRLVVKKKASLVIIAHDV 218
YRPE+ + KKQRL DTPTK+P ++ G NTVT LV KKA LV+IAHDV
Sbjct: 102 YRPETKQEKKQRLLARAEQKAAGKGDTPTKRPPVLRAGVNTVTTLVENKKAQLVVIAHDV 161
Query: 219 DPIELFKFL 227
DPIEL FL
Sbjct: 162 DPIELVVFL 170
Score = 305 (112.4 bits), Expect = 4.2e-53, Sum P(2) = 4.2e-53
Identities = 60/103 (58%), Positives = 72/103 (69%)
Query: 222 ELFKFLEKYRPESWEAKKQRLXXXXXXXXXXXXDTPTKKPNQIKQGTNTVTRLVVKKKAS 281
+L K KYRPE+ + KKQRL DTPTK+P ++ G NTVT LV KKA
Sbjct: 94 QLLKLAHKYRPETKQEKKQRLLARAEQKAAGKGDTPTKRPPVLRAGVNTVTTLVENKKAQ 153
Query: 282 LVIIAHDVDPIELVLFLPALCRKMGIPYCIVDSSDKANLAKLI 324
LV+IAHDVDPIELV+FLPALCRKMG+PYCI+ S KA L +L+
Sbjct: 154 LVVIAHDVDPIELVVFLPALCRKMGVPYCIIKS--KARLGRLV 194
Score = 262 (97.3 bits), Expect = 4.2e-53, Sum P(2) = 4.2e-53
Identities = 45/65 (69%), Positives = 59/65 (90%)
Query: 38 LFEKKARNFGIGQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLKVPPPVHQFTQAVDKQ 97
LFEK+ +NFGIGQDIQPKRDL+RFVKWP+YIR+QRQ+++L KRLKVPP ++QF+QA+D+Q
Sbjct: 31 LFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRSILYKRLKVPPAINQFSQALDRQ 90
Query: 98 TGQDI 102
T +
Sbjct: 91 TATQL 95
Score = 140 (54.3 bits), Expect = 2.6e-53, Sum P(2) = 2.6e-53
Identities = 26/45 (57%), Positives = 32/45 (71%)
Query: 307 IPYCIVDSSDKANLAKLIESVKVNFTDRYDEIRRQWGGGSLGSKS 351
+ + V+ DK LAKL+E+VK N+ DRYDEIRR WGG LG KS
Sbjct: 202 VAFTQVNPEDKGALAKLVEAVKTNYNDRYDEIRRHWGGNVLGPKS 246
>UNIPROTKB|F1M2H8 [details] [associations]
symbol:F1M2H8 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR004037 PROSITE:PS01082 InterPro:IPR004038
InterPro:IPR001921 Pfam:PF01248 GO:GO:0042254 GO:GO:0030529
InterPro:IPR018492 PRINTS:PR00881 PRINTS:PR00882 IPI:IPI00394012
Ensembl:ENSRNOT00000042119 Uniprot:F1M2H8
Length = 262
Score = 435 (158.2 bits), Expect = 3.3e-53, Sum P(2) = 3.3e-53
Identities = 89/158 (56%), Positives = 112/158 (70%)
Query: 72 RQKAVLQKR--LKVPPPVHQFTQAVDKQTGQDIQPKRDLSRFVKWPKYIRIQRQKAVLQK 129
R AV++K+ KV P+ + + + GQDIQPKRDL+RFVKWP+YIR+QRQ+A+L K
Sbjct: 10 RSPAVVKKQEAKKVVNPLFE-KRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYK 68
Query: 130 RLKVPPPVHQFTQAVDKQTASQLFKFLEKYRPESWEAKKQRLXXXXXXXXXXXXDTPTKK 189
RLKVPP ++QFTQA+D+QTA+QL K KYRPE+ + KKQRL D PTK+
Sbjct: 69 RLKVPPAINQFTQALDRQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPTKR 128
Query: 190 PNQIKQGTNTVTRLVVKKKASLVIIAHDVDPIELFKFL 227
P ++ G NTVT LV KKA LV+IAHDVDPIEL FL
Sbjct: 129 PPVLRAGVNTVTTLVENKKAQLVVIAHDVDPIELVVFL 166
Score = 296 (109.3 bits), Expect = 6.9e-53, Sum P(2) = 6.9e-53
Identities = 58/103 (56%), Positives = 70/103 (67%)
Query: 222 ELFKFLEKYRPESWEAKKQRLXXXXXXXXXXXXDTPTKKPNQIKQGTNTVTRLVVKKKAS 281
+L K KYRPE+ + KKQRL D PTK+P ++ G NTVT LV KKA
Sbjct: 90 QLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPTKRPPVLRAGVNTVTTLVENKKAQ 149
Query: 282 LVIIAHDVDPIELVLFLPALCRKMGIPYCIVDSSDKANLAKLI 324
LV+IAHDVDPIELV+FLPALCRKMG+PYCI+ KA L +L+
Sbjct: 150 LVVIAHDVDPIELVVFLPALCRKMGVPYCIIKG--KARLGRLV 190
Score = 269 (99.8 bits), Expect = 6.9e-53, Sum P(2) = 6.9e-53
Identities = 47/65 (72%), Positives = 59/65 (90%)
Query: 38 LFEKKARNFGIGQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLKVPPPVHQFTQAVDKQ 97
LFEK+ +NFGIGQDIQPKRDL+RFVKWP+YIR+QRQ+A+L KRLKVPP ++QFTQA+D+Q
Sbjct: 27 LFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALDRQ 86
Query: 98 TGQDI 102
T +
Sbjct: 87 TATQL 91
Score = 133 (51.9 bits), Expect = 3.3e-53, Sum P(2) = 3.3e-53
Identities = 24/45 (53%), Positives = 32/45 (71%)
Query: 307 IPYCIVDSSDKANLAKLIESVKVNFTDRYDEIRRQWGGGSLGSKS 351
+ + V+S DK LAKL+E+++ N+ DRYDEI R WGG LG KS
Sbjct: 198 VAFTQVNSEDKGALAKLVEAIRTNYNDRYDEICRHWGGNVLGPKS 242
>UNIPROTKB|I3LVI8 [details] [associations]
symbol:RPL7A "60S ribosomal protein L7a" species:9823 "Sus
scrofa" [GO:0042788 "polysomal ribosome" evidence=IEA] [GO:0022625
"cytosolic large ribosomal subunit" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] InterPro:IPR004037 PROSITE:PS01082 InterPro:IPR004038
InterPro:IPR001921 Pfam:PF01248 GO:GO:0042254 GO:GO:0042788
GO:GO:0022625 InterPro:IPR018492 PRINTS:PR00881 KO:K02936
PRINTS:PR00882 GeneTree:ENSGT00390000004753 OMA:QRSILYK
EMBL:CU694523 RefSeq:XP_003125024.2 RefSeq:XP_003481224.1
RefSeq:XP_003481225.1 Ensembl:ENSSSCT00000024482 GeneID:100525692
KEGG:ssc:100525692 Uniprot:I3LVI8
Length = 266
Score = 431 (156.8 bits), Expect = 4.2e-53, Sum P(2) = 4.2e-53
Identities = 82/129 (63%), Positives = 98/129 (75%)
Query: 99 GQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLKVPPPVHQFTQAVDKQTASQLFKFLEK 158
GQDIQPKRDL+RFVKWP+YIR+QRQ+A+L KRLKVPP ++QFTQA+D+QTA+QL K K
Sbjct: 42 GQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPTINQFTQALDRQTATQLLKLTHK 101
Query: 159 YRPESWEAKKQRLXXXXXXXXXXXXDTPTKKPNQIKQGTNTVTRLVVKKKASLVIIAHDV 218
YRPE+ + KKQRL D PTK+P ++ G NTVT LV KKA LV+IAHDV
Sbjct: 102 YRPETKQEKKQRLLARAEKKAAGKGDVPTKRPPVLRAGVNTVTTLVENKKAQLVVIAHDV 161
Query: 219 DPIELFKFL 227
DPIEL FL
Sbjct: 162 DPIELVVFL 170
Score = 296 (109.3 bits), Expect = 6.9e-53, Sum P(2) = 6.9e-53
Identities = 58/103 (56%), Positives = 70/103 (67%)
Query: 222 ELFKFLEKYRPESWEAKKQRLXXXXXXXXXXXXDTPTKKPNQIKQGTNTVTRLVVKKKAS 281
+L K KYRPE+ + KKQRL D PTK+P ++ G NTVT LV KKA
Sbjct: 94 QLLKLTHKYRPETKQEKKQRLLARAEKKAAGKGDVPTKRPPVLRAGVNTVTTLVENKKAQ 153
Query: 282 LVIIAHDVDPIELVLFLPALCRKMGIPYCIVDSSDKANLAKLI 324
LV+IAHDVDPIELV+FLPALCRKMG+PYCI+ KA L +L+
Sbjct: 154 LVVIAHDVDPIELVVFLPALCRKMGVPYCIIKG--KARLGRLV 194
Score = 269 (99.8 bits), Expect = 6.9e-53, Sum P(2) = 6.9e-53
Identities = 47/65 (72%), Positives = 59/65 (90%)
Query: 38 LFEKKARNFGIGQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLKVPPPVHQFTQAVDKQ 97
LFEK+ +NFGIGQDIQPKRDL+RFVKWP+YIR+QRQ+A+L KRLKVPP ++QFTQA+D+Q
Sbjct: 31 LFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPTINQFTQALDRQ 90
Query: 98 TGQDI 102
T +
Sbjct: 91 TATQL 95
Score = 136 (52.9 bits), Expect = 4.2e-53, Sum P(2) = 4.2e-53
Identities = 24/45 (53%), Positives = 33/45 (73%)
Query: 307 IPYCIVDSSDKANLAKLIESVKVNFTDRYDEIRRQWGGGSLGSKS 351
+ + V+S DK LAKL+E+++ N+ DRY+EIRR WGG LG KS
Sbjct: 202 VAFTQVNSEDKGALAKLVEAIRTNYNDRYNEIRRHWGGNVLGPKS 246
>POMBASE|SPBC29A3.04 [details] [associations]
symbol:rpl8 "60S ribosomal protein L7a/L8 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic
translation" evidence=NAS] [GO:0003735 "structural constituent of
ribosome" evidence=ISO] [GO:0006412 "translation" evidence=ISO]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=ISO]
[GO:0042254 "ribosome biogenesis" evidence=IEA] InterPro:IPR004037
PROSITE:PS01082 InterPro:IPR004038 InterPro:IPR001921 Pfam:PF01248
PomBase:SPBC29A3.04 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0042254 GO:GO:0003735 GO:GO:0002181 GO:GO:0022625
eggNOG:COG1358 InterPro:IPR018492 PRINTS:PR00881
HOGENOM:HOG000216644 KO:K02936 PANTHER:PTHR23105:SF1 PRINTS:PR00882
OMA:QRSILYK OrthoDB:EOG4KWP2Z EMBL:AJ001133 EMBL:AB005750
PIR:T40075 RefSeq:NP_595832.1 ProteinModelPortal:O13672 SMR:O13672
IntAct:O13672 MINT:MINT-4782010 STRING:O13672 PRIDE:O13672
EnsemblFungi:SPBC29A3.04.1 GeneID:2540517 KEGG:spo:SPBC29A3.04
NextBio:20801644 Uniprot:O13672
Length = 259
Score = 361 (132.1 bits), Expect = 6.7e-43, Sum P(2) = 6.7e-43
Identities = 73/130 (56%), Positives = 88/130 (67%)
Query: 99 GQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLKVPPPVHQFTQAVDKQTASQLFKFLEK 158
GQDIQPKRDLSRFVKWP+YIR+QR++ +L RLKVPP + QF + +DK TA+Q+FK L K
Sbjct: 37 GQDIQPKRDLSRFVKWPEYIRLQRRRKILNLRLKVPPAIAQFQKTLDKNTATQVFKLLNK 96
Query: 159 YRPESWEAKKQRLXXXXXXXXXX-XXDTPTKKPNQIKQGTNTVTRLVVKKKASLVIIAHD 217
YRPE+ KKQRL +KKP +K G N V L+ KKA LV+IA D
Sbjct: 97 YRPETAAEKKQRLVAEAEAVANGKSAQDVSKKPYNVKYGLNHVVALIEAKKAKLVLIASD 156
Query: 218 VDPIELFKFL 227
VDPIEL FL
Sbjct: 157 VDPIELVVFL 166
Score = 244 (91.0 bits), Expect = 6.0e-53, Sum P(3) = 6.0e-53
Identities = 53/104 (50%), Positives = 65/104 (62%)
Query: 222 ELFKFLEKYRPESWEAKKQRLXXXXXXXXXX-XXDTPTKKPNQIKQGTNTVTRLVVKKKA 280
++FK L KYRPE+ KKQRL +KKP +K G N V L+ KKA
Sbjct: 89 QVFKLLNKYRPETAAEKKQRLVAEAEAVANGKSAQDVSKKPYNVKYGLNHVVALIEAKKA 148
Query: 281 SLVIIAHDVDPIELVLFLPALCRKMGIPYCIVDSSDKANLAKLI 324
LV+IA DVDPIELV+FLPALC+KMG+PY IV +KA L +I
Sbjct: 149 KLVLIASDVDPIELVVFLPALCKKMGVPYAIV--KNKARLGTVI 190
Score = 224 (83.9 bits), Expect = 6.0e-53, Sum P(3) = 6.0e-53
Identities = 40/65 (61%), Positives = 51/65 (78%)
Query: 38 LFEKKARNFGIGQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLKVPPPVHQFTQAVDKQ 97
LF + R+FGIGQDIQPKRDLSRFVKWP+YIR+QR++ +L RLKVPP + QF + +DK
Sbjct: 26 LFVSRPRSFGIGQDIQPKRDLSRFVKWPEYIRLQRRRKILNLRLKVPPAIAQFQKTLDKN 85
Query: 98 TGQDI 102
T +
Sbjct: 86 TATQV 90
Score = 109 (43.4 bits), Expect = 6.0e-53, Sum P(3) = 6.0e-53
Identities = 19/40 (47%), Positives = 27/40 (67%)
Query: 312 VDSSDKANLAKLIESVKVNFTDRYDEIRRQWGGGSLGSKS 351
V DK LA ++ +V NF+ +YDE RR+WGGG +G K+
Sbjct: 203 VREEDKNELASIVSAVDANFSAKYDESRRKWGGGIMGGKT 242
>TAIR|locus:2062057 [details] [associations]
symbol:AT2G47610 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0022626 "cytosolic ribosome" evidence=IDA]
[GO:0005774 "vacuolar membrane" evidence=IDA] [GO:0022625
"cytosolic large ribosomal subunit" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA]
[GO:0001510 "RNA methylation" evidence=RCA] InterPro:IPR004037
PROSITE:PS01082 InterPro:IPR004038 InterPro:IPR001921 Pfam:PF01248
GO:GO:0009506 GO:GO:0005774 GO:GO:0009507 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0005730 GO:GO:0042254 EMBL:AC002535
GO:GO:0022625 eggNOG:COG1358 InterPro:IPR018492 PRINTS:PR00881
EMBL:AF385719 EMBL:AY052674 EMBL:BT000500 EMBL:AY088386 EMBL:Z26806
IPI:IPI00549123 PIR:T00423 RefSeq:NP_182283.1 UniGene:At.23347
ProteinModelPortal:P49692 SMR:P49692 IntAct:P49692 STRING:P49692
PaxDb:P49692 PRIDE:P49692 EnsemblPlants:AT2G47610.1 GeneID:819374
KEGG:ath:AT2G47610 TAIR:At2g47610 HOGENOM:HOG000216644
InParanoid:P49692 KO:K02936 OMA:ESARRTW PhylomeDB:P49692
ProtClustDB:CLSN2683620 Genevestigator:P49692 GermOnline:AT2G47610
PANTHER:PTHR23105:SF1 PRINTS:PR00882 Uniprot:P49692
Length = 257
Score = 336 (123.3 bits), Expect = 3.6e-42, Sum P(2) = 3.6e-42
Identities = 68/129 (52%), Positives = 89/129 (68%)
Query: 99 GQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLKVPPPVHQFTQAVDKQTASQLFKFLEK 158
G + PK+DLSR++KWPK IR+QRQK +L++RLKVPP ++QFT+ +DK A+ LFK L K
Sbjct: 34 GGALPPKKDLSRYIKWPKSIRLQRQKRILKQRLKVPPALNQFTKTLDKNLATSLFKVLLK 93
Query: 159 YRPESWEAKKQRLXXXXXXXXXXXXDTPTKKPNQIKQGTNTVTRLVVKKKASLVIIAHDV 218
YRPE AKK+RL + +KKP +K G N VT L+ + KA LV+IAHDV
Sbjct: 94 YRPEDKAAKKERLVKKAQAEAEGK-PSESKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDV 152
Query: 219 DPIELFKFL 227
DPIEL +L
Sbjct: 153 DPIELVVWL 161
Score = 243 (90.6 bits), Expect = 9.7e-53, Sum P(3) = 9.7e-53
Identities = 51/95 (53%), Positives = 62/95 (65%)
Query: 223 LFKFLEKYRPESWEAKKQRLXXXXXXXXXXXXDTPTKKPNQIKQGTNTVTRLVVKKKASL 282
LFK L KYRPE AKK+RL + +KKP +K G N VT L+ + KA L
Sbjct: 87 LFKVLLKYRPEDKAAKKERLVKKAQAEAEGK-PSESKKPIVVKYGLNHVTYLIEQNKAQL 145
Query: 283 VIIAHDVDPIELVLFLPALCRKMGIPYCIVDSSDK 317
V+IAHDVDPIELV++LPALCRKM +PYCIV +
Sbjct: 146 VVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSR 180
Score = 205 (77.2 bits), Expect = 9.7e-53, Sum P(3) = 9.7e-53
Identities = 35/59 (59%), Positives = 50/59 (84%)
Query: 38 LFEKKARNFGIGQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLKVPPPVHQFTQAVDK 96
LFE++ + FGIG + PK+DLSR++KWPK IR+QRQK +L++RLKVPP ++QFT+ +DK
Sbjct: 23 LFERRPKQFGIGGALPPKKDLSRYIKWPKSIRLQRQKRILKQRLKVPPALNQFTKTLDK 81
Score = 127 (49.8 bits), Expect = 9.7e-53, Sum P(3) = 9.7e-53
Identities = 20/40 (50%), Positives = 31/40 (77%)
Query: 312 VDSSDKANLAKLIESVKVNFTDRYDEIRRQWGGGSLGSKS 351
V + DK +K++E++K NF D+Y+E R++WGGG +GSKS
Sbjct: 198 VKNEDKLEFSKILEAIKANFNDKYEEYRKKWGGGIMGSKS 237
>RGD|1562953 [details] [associations]
symbol:RGD1562953 "similar to Rpl7a protein" species:10116
"Rattus norvegicus" [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR004037 PROSITE:PS01082 InterPro:IPR004038
InterPro:IPR001921 Pfam:PF01248 RGD:1562953 GO:GO:0042254
GO:GO:0030529 InterPro:IPR018492 PRINTS:PR00881 KO:K02936
PRINTS:PR00882 GeneTree:ENSGT00390000004753 OrthoDB:EOG4B8JDV
IPI:IPI00568945 RefSeq:XP_001066216.1 RefSeq:XP_574700.1
PRIDE:D3ZPL5 Ensembl:ENSRNOT00000041410 GeneID:499382
KEGG:rno:499382 CTD:499382 OMA:CCEAGIS NextBio:702734
Uniprot:D3ZPL5
Length = 266
Score = 420 (152.9 bits), Expect = 1.8e-52, Sum P(2) = 1.8e-52
Identities = 80/129 (62%), Positives = 97/129 (75%)
Query: 99 GQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLKVPPPVHQFTQAVDKQTASQLFKFLEK 158
GQDIQPKRDL+RFV+WP+YIR+QRQ+A+L KRLKVPP ++QFTQA+D+QTA+QL K K
Sbjct: 42 GQDIQPKRDLTRFVRWPRYIRLQRQRAILYKRLKVPPAINQFTQALDRQTATQLLKLAHK 101
Query: 159 YRPESWEAKKQRLXXXXXXXXXXXXDTPTKKPNQIKQGTNTVTRLVVKKKASLVIIAHDV 218
YRPE+ + KKQRL D PTK+P ++ G NTVT LV KKA LV+IA DV
Sbjct: 102 YRPETKQEKKQRLLARAEKKAAGKGDVPTKRPPVLRAGVNTVTTLVENKKAQLVVIARDV 161
Query: 219 DPIELFKFL 227
DPIEL FL
Sbjct: 162 DPIELVVFL 170
Score = 271 (100.5 bits), Expect = 6.0e-50, Sum P(2) = 6.0e-50
Identities = 55/103 (53%), Positives = 66/103 (64%)
Query: 222 ELFKFLEKYRPESWEAKKQRLXXXXXXXXXXXXDTPTKKPNQIKQGTNTVTRLVVKKKAS 281
+L K KYRPE+ + KKQRL D PTK+P ++ G NTVT LV KKA
Sbjct: 94 QLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPTKRPPVLRAGVNTVTTLVENKKAQ 153
Query: 282 LVIIAHDVDPIELVLFLPALCRKMGIPYCIVDSSDKANLAKLI 324
LV+IA DVDPIELV+FLPALCRKMG+PY I+ K L L+
Sbjct: 154 LVVIARDVDPIELVVFLPALCRKMGVPYLIIKG--KTRLGHLV 194
Score = 266 (98.7 bits), Expect = 6.0e-50, Sum P(2) = 6.0e-50
Identities = 46/65 (70%), Positives = 59/65 (90%)
Query: 38 LFEKKARNFGIGQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLKVPPPVHQFTQAVDKQ 97
LFEK+ +NFGIGQDIQPKRDL+RFV+WP+YIR+QRQ+A+L KRLKVPP ++QFTQA+D+Q
Sbjct: 31 LFEKRPKNFGIGQDIQPKRDLTRFVRWPRYIRLQRQRAILYKRLKVPPAINQFTQALDRQ 90
Query: 98 TGQDI 102
T +
Sbjct: 91 TATQL 95
Score = 141 (54.7 bits), Expect = 1.8e-52, Sum P(2) = 1.8e-52
Identities = 25/45 (55%), Positives = 33/45 (73%)
Query: 307 IPYCIVDSSDKANLAKLIESVKVNFTDRYDEIRRQWGGGSLGSKS 351
+ + V+S DK LAKL+E+++ N+ DRYDEIRR WGG LG KS
Sbjct: 202 VAFTQVNSEDKGALAKLVEAIRTNYNDRYDEIRRHWGGNVLGPKS 246
>RGD|1595463 [details] [associations]
symbol:LOC680161 "similar to 60S ribosomal protein L7a"
species:10116 "Rattus norvegicus" [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] InterPro:IPR004037 PROSITE:PS01082 InterPro:IPR004038
InterPro:IPR001921 Pfam:PF01248 RGD:1595463 GO:GO:0042254
GO:GO:0030529 InterPro:IPR018492 PRINTS:PR00881 KO:K02936
PRINTS:PR00882 GeneTree:ENSGT00390000004753 OrthoDB:EOG4B8JDV
IPI:IPI00565067 RefSeq:XP_001056899.1 RefSeq:XP_002726525.1
Ensembl:ENSRNOT00000047694 GeneID:680161 KEGG:rno:680161
UCSC:RGD:1595463 NextBio:718089 Uniprot:D4A6B9
Length = 266
Score = 426 (155.0 bits), Expect = 4.8e-52, Sum P(2) = 4.8e-52
Identities = 81/129 (62%), Positives = 97/129 (75%)
Query: 99 GQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLKVPPPVHQFTQAVDKQTASQLFKFLEK 158
GQDIQPKRDL+RF+KWP+YIR+QRQ+A+L KRLKVPP V+QFTQ +D+QTA+QL K K
Sbjct: 42 GQDIQPKRDLTRFIKWPRYIRLQRQRAILYKRLKVPPAVNQFTQVLDRQTATQLLKLAHK 101
Query: 159 YRPESWEAKKQRLXXXXXXXXXXXXDTPTKKPNQIKQGTNTVTRLVVKKKASLVIIAHDV 218
YRPE+ + KKQRL D PTK+P ++ G NTVT LV KKA LV+IAHDV
Sbjct: 102 YRPETKQEKKQRLLAPADKKAAGKGDVPTKRPPVLRAGVNTVTTLVENKKAQLVVIAHDV 161
Query: 219 DPIELFKFL 227
DPIEL FL
Sbjct: 162 DPIELVVFL 170
Score = 288 (106.4 bits), Expect = 1.3e-51, Sum P(2) = 1.3e-51
Identities = 57/103 (55%), Positives = 69/103 (66%)
Query: 222 ELFKFLEKYRPESWEAKKQRLXXXXXXXXXXXXDTPTKKPNQIKQGTNTVTRLVVKKKAS 281
+L K KYRPE+ + KKQRL D PTK+P ++ G NTVT LV KKA
Sbjct: 94 QLLKLAHKYRPETKQEKKQRLLAPADKKAAGKGDVPTKRPPVLRAGVNTVTTLVENKKAQ 153
Query: 282 LVIIAHDVDPIELVLFLPALCRKMGIPYCIVDSSDKANLAKLI 324
LV+IAHDVDPIELV+FLPALC KMG+PYCI+ KA L +L+
Sbjct: 154 LVVIAHDVDPIELVVFLPALCGKMGVPYCIIKG--KARLGRLV 194
Score = 265 (98.3 bits), Expect = 1.3e-51, Sum P(2) = 1.3e-51
Identities = 46/65 (70%), Positives = 58/65 (89%)
Query: 38 LFEKKARNFGIGQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLKVPPPVHQFTQAVDKQ 97
LFEK+ +NFGIGQDIQPKRDL+RF+KWP+YIR+QRQ+A+L KRLKVPP V+QFTQ +D+Q
Sbjct: 31 LFEKRPKNFGIGQDIQPKRDLTRFIKWPRYIRLQRQRAILYKRLKVPPAVNQFTQVLDRQ 90
Query: 98 TGQDI 102
T +
Sbjct: 91 TATQL 95
Score = 131 (51.2 bits), Expect = 4.8e-52, Sum P(2) = 4.8e-52
Identities = 23/45 (51%), Positives = 32/45 (71%)
Query: 307 IPYCIVDSSDKANLAKLIESVKVNFTDRYDEIRRQWGGGSLGSKS 351
+ + V+S DK LAKL+E+++ N+ DRYD+IR WGG LG KS
Sbjct: 202 VAFTQVNSEDKGALAKLVETIRTNYNDRYDKIRSHWGGNVLGPKS 246
>RGD|1563045 [details] [associations]
symbol:RGD1563045 "similar to 60S ribosomal protein L7a"
species:10116 "Rattus norvegicus" [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] InterPro:IPR004037 PROSITE:PS01082 InterPro:IPR004038
InterPro:IPR001921 Pfam:PF01248 RGD:1563045 GO:GO:0042254
GO:GO:0030529 InterPro:IPR018492 PRINTS:PR00881 PRINTS:PR00882
GeneTree:ENSGT00390000004753 IPI:IPI00561293
Ensembl:ENSRNOT00000047511 OMA:PSINQFT Uniprot:F1M4C7
Length = 270
Score = 420 (152.9 bits), Expect = 2.0e-51, Sum P(2) = 2.0e-51
Identities = 90/172 (52%), Positives = 116/172 (67%)
Query: 63 KWPKYIRIQRQK-----AVLQKR--LKVPPPVHQFTQAVDKQTGQDIQPKRDLSRFVKWP 115
K PK + +R+K AV++K+ KV P+ + + + GQDIQPKRDL+RFVKWP
Sbjct: 4 KMPKGKKAKRKKVTPAPAVVKKQEAKKVVNPLFE-KRPKNFGIGQDIQPKRDLTRFVKWP 62
Query: 116 KYIRIQRQKAVLQKRLKVPPPVHQFTQAVDKQTASQLFKFLEKYRPESWEAKKQRLXXXX 175
+YIR+QRQ+A+ KRLKVPP ++Q TQA+D+QTA+QL K KYRPE+ + KKQRL
Sbjct: 63 RYIRLQRQRAIPYKRLKVPPAINQLTQALDRQTATQLLKLAHKYRPETKQEKKQRLLART 122
Query: 176 XXXXXXXXDTPTKKPNQIKQGTNTVTRLVVKKKASLVIIAHDVDPIELFKFL 227
D PTK+P ++ G NTVT LV KKA L +IAHDVDPIEL FL
Sbjct: 123 EKKAAGKGDVPTKRPPVLRAGVNTVTTLVENKKAQLAVIAHDVDPIELVVFL 174
Score = 284 (105.0 bits), Expect = 2.9e-50, Sum P(2) = 2.9e-50
Identities = 56/103 (54%), Positives = 68/103 (66%)
Query: 222 ELFKFLEKYRPESWEAKKQRLXXXXXXXXXXXXDTPTKKPNQIKQGTNTVTRLVVKKKAS 281
+L K KYRPE+ + KKQRL D PTK+P ++ G NTVT LV KKA
Sbjct: 98 QLLKLAHKYRPETKQEKKQRLLARTEKKAAGKGDVPTKRPPVLRAGVNTVTTLVENKKAQ 157
Query: 282 LVIIAHDVDPIELVLFLPALCRKMGIPYCIVDSSDKANLAKLI 324
L +IAHDVDPIELV+FLPALCRKM +PYCI+ KA L +L+
Sbjct: 158 LAVIAHDVDPIELVVFLPALCRKMRVPYCIIKG--KARLGRLV 198
Score = 256 (95.2 bits), Expect = 2.9e-50, Sum P(2) = 2.9e-50
Identities = 45/65 (69%), Positives = 57/65 (87%)
Query: 38 LFEKKARNFGIGQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLKVPPPVHQFTQAVDKQ 97
LFEK+ +NFGIGQDIQPKRDL+RFVKWP+YIR+QRQ+A+ KRLKVPP ++Q TQA+D+Q
Sbjct: 35 LFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAIPYKRLKVPPAINQLTQALDRQ 94
Query: 98 TGQDI 102
T +
Sbjct: 95 TATQL 99
Score = 131 (51.2 bits), Expect = 2.0e-51, Sum P(2) = 2.0e-51
Identities = 26/51 (50%), Positives = 34/51 (66%)
Query: 303 RKM--GIPYCIVDSSDKANLAKLIESVKVNFTDRYDEIRRQWGGGSLGSKS 351
RKM + + V+S DK LAKL+E+++ N+ DRY EI R WGG LG KS
Sbjct: 200 RKMCTTVAFTKVNSEDKGALAKLVEAIRTNYNDRYGEIHRHWGGNVLGPKS 250
>RGD|1564370 [details] [associations]
symbol:RGD1564370 "similar to 60S ribosomal protein L7a"
species:10116 "Rattus norvegicus" [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] InterPro:IPR004037 PROSITE:PS01082 InterPro:IPR004038
InterPro:IPR001921 Pfam:PF01248 RGD:1564370 GO:GO:0042254
GO:GO:0030529 InterPro:IPR018492 PRINTS:PR00881 PRINTS:PR00882
GeneTree:ENSGT00390000004753 IPI:IPI00567521
Ensembl:ENSRNOT00000043491 Uniprot:F1M2Q3
Length = 270
Score = 390 (142.3 bits), Expect = 2.6e-49, Sum P(2) = 2.6e-49
Identities = 75/129 (58%), Positives = 93/129 (72%)
Query: 99 GQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLKVPPPVHQFTQAVDKQTASQLFKFLEK 158
GQDIQP+RDL+ FVKWP+YIR+Q+Q+A+L KRLKVPP ++QF QA+D+QTA+QL K K
Sbjct: 46 GQDIQPRRDLTCFVKWPRYIRLQQQRAILYKRLKVPPAINQFPQALDRQTATQLLKLAHK 105
Query: 159 YRPESWEAKKQRLXXXXXXXXXXXXDTPTKKPNQIKQGTNTVTRLVVKKKASLVIIAHDV 218
YRPE+ + KKQ L D PTK+P + G NTVT LV K+A LV+ AHDV
Sbjct: 106 YRPETKQEKKQGLLARAEKKAAGKGDIPTKRPPVLLAGVNTVTTLVENKRAQLVVTAHDV 165
Query: 219 DPIELFKFL 227
DPIEL FL
Sbjct: 166 DPIELVVFL 174
Score = 276 (102.2 bits), Expect = 1.4e-48, Sum P(2) = 1.4e-48
Identities = 55/103 (53%), Positives = 67/103 (65%)
Query: 222 ELFKFLEKYRPESWEAKKQRLXXXXXXXXXXXXDTPTKKPNQIKQGTNTVTRLVVKKKAS 281
+L K KYRPE+ + KKQ L D PTK+P + G NTVT LV K+A
Sbjct: 98 QLLKLAHKYRPETKQEKKQGLLARAEKKAAGKGDIPTKRPPVLLAGVNTVTTLVENKRAQ 157
Query: 282 LVIIAHDVDPIELVLFLPALCRKMGIPYCIVDSSDKANLAKLI 324
LV+ AHDVDPIELV+FLPALCRKMG+PYCI+ KA L +L+
Sbjct: 158 LVVTAHDVDPIELVVFLPALCRKMGVPYCIIKG--KARLGRLV 198
Score = 248 (92.4 bits), Expect = 1.4e-48, Sum P(2) = 1.4e-48
Identities = 43/65 (66%), Positives = 57/65 (87%)
Query: 38 LFEKKARNFGIGQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLKVPPPVHQFTQAVDKQ 97
LFEK+ +NFGIGQDIQP+RDL+ FVKWP+YIR+Q+Q+A+L KRLKVPP ++QF QA+D+Q
Sbjct: 35 LFEKRPKNFGIGQDIQPRRDLTCFVKWPRYIRLQQQRAILYKRLKVPPAINQFPQALDRQ 94
Query: 98 TGQDI 102
T +
Sbjct: 95 TATQL 99
Score = 141 (54.7 bits), Expect = 2.6e-49, Sum P(2) = 2.6e-49
Identities = 25/45 (55%), Positives = 33/45 (73%)
Query: 307 IPYCIVDSSDKANLAKLIESVKVNFTDRYDEIRRQWGGGSLGSKS 351
+ + V+S DK LAKL+E+++ N+ DRYDEIRR WGG LG KS
Sbjct: 206 VAFTQVNSEDKGALAKLVEAIRTNYNDRYDEIRRHWGGNILGPKS 250
>RGD|1562409 [details] [associations]
symbol:RGD1562409 "similar to 60S ribosomal protein L7a"
species:10116 "Rattus norvegicus" [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] InterPro:IPR004037 PROSITE:PS01082 InterPro:IPR004038
InterPro:IPR001921 Pfam:PF01248 RGD:1562409 GO:GO:0042254
GO:GO:0030529 InterPro:IPR018492 PRINTS:PR00881 KO:K02936
PRINTS:PR00882 GeneTree:ENSGT00390000004753 OrthoDB:EOG4B8JDV
IPI:IPI00559332 RefSeq:XP_001061180.1 RefSeq:XP_575149.1
Ensembl:ENSRNOT00000047713 GeneID:499809 KEGG:rno:499809
UCSC:RGD:1562409 CTD:499809 NextBio:704076 Uniprot:D3ZJH5
Length = 266
Score = 396 (144.5 bits), Expect = 4.2e-49, Sum P(2) = 4.2e-49
Identities = 77/129 (59%), Positives = 93/129 (72%)
Query: 99 GQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLKVPPPVHQFTQAVDKQTASQLFKFLEK 158
GQDIQPKRDL+RFVKWP+YIR+QRQ+A+L K LKV P ++QFTQA+D+QT +Q K K
Sbjct: 42 GQDIQPKRDLTRFVKWPRYIRLQRQRAILYKWLKVSPAINQFTQALDRQTVTQPLKLAHK 101
Query: 159 YRPESWEAKKQRLXXXXXXXXXXXXDTPTKKPNQIKQGTNTVTRLVVKKKASLVIIAHDV 218
YR E+ + KKQRL D PTK+P ++ G NTVT LV KKA LV+IAHDV
Sbjct: 102 YRSETKQEKKQRLLARAEKKAAGKGDVPTKRPPVLRAGVNTVTTLVENKKAQLVVIAHDV 161
Query: 219 DPIELFKFL 227
DPIEL FL
Sbjct: 162 DPIELVVFL 170
Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
Identities = 56/100 (56%), Positives = 67/100 (67%)
Query: 225 KFLEKYRPESWEAKKQRLXXXXXXXXXXXXDTPTKKPNQIKQGTNTVTRLVVKKKASLVI 284
K KYR E+ + KKQRL D PTK+P ++ G NTVT LV KKA LV+
Sbjct: 97 KLAHKYRSETKQEKKQRLLARAEKKAAGKGDVPTKRPPVLRAGVNTVTTLVENKKAQLVV 156
Query: 285 IAHDVDPIELVLFLPALCRKMGIPYCIVDSSDKANLAKLI 324
IAHDVDPIELV+FLPALCRKMG+PYCI+ KA L +L+
Sbjct: 157 IAHDVDPIELVVFLPALCRKMGVPYCIIKG--KARLGRLV 194
Score = 256 (95.2 bits), Expect = 2.1e-34, Sum P(2) = 2.1e-34
Identities = 52/93 (55%), Positives = 69/93 (74%)
Query: 38 LFEKKARNFGIGQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLKVPPPVHQFTQAVDKQ 97
LFEK+ +NFGIGQDIQPKRDL+RFVKWP+YIR+QRQ+A+L K LKV P ++QFTQA+D+Q
Sbjct: 31 LFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKWLKVSPAINQFTQALDRQ 90
Query: 98 TGQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKR 130
T QP + ++ K + QR A +K+
Sbjct: 91 TVT--QPLKLAHKYRSETKQEKKQRLLARAEKK 121
Score = 133 (51.9 bits), Expect = 4.2e-49, Sum P(2) = 4.2e-49
Identities = 23/45 (51%), Positives = 32/45 (71%)
Query: 307 IPYCIVDSSDKANLAKLIESVKVNFTDRYDEIRRQWGGGSLGSKS 351
+ + V+S DK LAKL+E+++ N+ D+YDEIR WGG LG KS
Sbjct: 202 VAFTQVNSEDKGALAKLVEAIRTNYNDKYDEIRHHWGGNVLGPKS 246
>RGD|1583272 [details] [associations]
symbol:LOC685027 "similar to 60S ribosomal protein L7a"
species:10116 "Rattus norvegicus" [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] InterPro:IPR004037 PROSITE:PS01082 InterPro:IPR004038
InterPro:IPR001921 Pfam:PF01248 RGD:1583272 GO:GO:0042254
GO:GO:0030529 InterPro:IPR018492 PRINTS:PR00881 PRINTS:PR00882
GeneTree:ENSGT00390000004753 OrthoDB:EOG4B8JDV IPI:IPI00556962
RefSeq:XP_003750079.1 RefSeq:XP_003754150.1
Ensembl:ENSRNOT00000051387 GeneID:100911987 KEGG:rno:100911987
Uniprot:D3ZNA3
Length = 266
Score = 385 (140.6 bits), Expect = 7.7e-48, Sum P(2) = 7.7e-48
Identities = 74/129 (57%), Positives = 92/129 (71%)
Query: 99 GQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLKVPPPVHQFTQAVDKQTASQLFKFLEK 158
GQDIQPKRDL+RFVKWP YIR+Q Q+A+L K++KVPP ++QF QA+ +QT +QL K K
Sbjct: 42 GQDIQPKRDLTRFVKWPHYIRLQWQRAILYKQVKVPPAINQFLQALVRQTVTQLLKLAHK 101
Query: 159 YRPESWEAKKQRLXXXXXXXXXXXXDTPTKKPNQIKQGTNTVTRLVVKKKASLVIIAHDV 218
YRPE+ + KKQRL D PT++P ++ G NTVT LV KKA LV+ AHDV
Sbjct: 102 YRPETKQEKKQRLLAHAEKKAAGKGDVPTERPPVLRAGVNTVTTLVENKKAQLVVTAHDV 161
Query: 219 DPIELFKFL 227
DPIEL FL
Sbjct: 162 DPIELVVFL 170
Score = 286 (105.7 bits), Expect = 1.8e-48, Sum P(2) = 1.8e-48
Identities = 56/103 (54%), Positives = 69/103 (66%)
Query: 222 ELFKFLEKYRPESWEAKKQRLXXXXXXXXXXXXDTPTKKPNQIKQGTNTVTRLVVKKKAS 281
+L K KYRPE+ + KKQRL D PT++P ++ G NTVT LV KKA
Sbjct: 94 QLLKLAHKYRPETKQEKKQRLLAHAEKKAAGKGDVPTERPPVLRAGVNTVTTLVENKKAQ 153
Query: 282 LVIIAHDVDPIELVLFLPALCRKMGIPYCIVDSSDKANLAKLI 324
LV+ AHDVDPIELV+FLPALCRKMG+PYCI+ KA L +L+
Sbjct: 154 LVVTAHDVDPIELVVFLPALCRKMGVPYCIIRG--KARLGRLV 194
Score = 237 (88.5 bits), Expect = 1.8e-48, Sum P(2) = 1.8e-48
Identities = 42/61 (68%), Positives = 55/61 (90%)
Query: 38 LFEKKARNFGIGQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLKVPPPVHQFTQAVDKQ 97
LFEK+++NFGIGQDIQPKRDL+RFVKWP YIR+Q Q+A+L K++KVPP ++QF QA+ +Q
Sbjct: 31 LFEKRSKNFGIGQDIQPKRDLTRFVKWPHYIRLQWQRAILYKQVKVPPAINQFLQALVRQ 90
Query: 98 T 98
T
Sbjct: 91 T 91
Score = 132 (51.5 bits), Expect = 7.7e-48, Sum P(2) = 7.7e-48
Identities = 24/45 (53%), Positives = 32/45 (71%)
Query: 307 IPYCIVDSSDKANLAKLIESVKVNFTDRYDEIRRQWGGGSLGSKS 351
+ + V+S DK LAKL+E+++ N+ DRYDEIR WGG LG KS
Sbjct: 202 VAFTQVNSKDKGALAKLVEAIRTNYDDRYDEIRCHWGGNVLGPKS 246
>RGD|1559149 [details] [associations]
symbol:RGD1559149 "sim to 60S ribosomal protein L7a"
species:10116 "Rattus norvegicus" [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] InterPro:IPR004037 PROSITE:PS01082 InterPro:IPR004038
InterPro:IPR001921 Pfam:PF01248 RGD:1559149 GO:GO:0042254
GO:GO:0030529 InterPro:IPR018492 PRINTS:PR00881 PRINTS:PR00882
GeneTree:ENSGT00390000004753 OrthoDB:EOG4B8JDV IPI:IPI00366343
Ensembl:ENSRNOT00000041927 UCSC:RGD:1559149 NextBio:656798
Uniprot:D3ZWM2
Length = 262
Score = 374 (136.7 bits), Expect = 6.8e-47, Sum P(2) = 6.8e-47
Identities = 82/161 (50%), Positives = 106/161 (65%)
Query: 69 RIQRQKAVLQKR--LKVPPPVHQFTQAVDKQTGQDIQPKRDLSRFVKWPKYIRIQRQKAV 126
++ AV++K+ KV P+ + + + GQDIQPKRDL KWP YIR+Q+Q+A+
Sbjct: 11 KVAPASAVVKKQEAKKVVNPLFE-KRPKNFGIGQDIQPKRDL----KWPCYIRLQQQRAI 65
Query: 127 LQKRLKVPPPVHQFTQAVDKQTASQLFKFLEKYRPESWEAKKQRLXXXXXXXXXXXXDTP 186
L KRLKVPP ++QFTQA+D+QTA+QL K KYRPE+ + KKQRL D P
Sbjct: 66 LYKRLKVPPAINQFTQALDRQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKRDVP 125
Query: 187 TKKPNQIKQGTNTVTRLVVKKKASLVIIAHDVDPIELFKFL 227
K+ ++ G NTVT LV KKA LV+IAHDVDPIEL FL
Sbjct: 126 PKRVPVLQAGVNTVTTLVENKKAQLVMIAHDVDPIELVVFL 166
Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
Identities = 55/103 (53%), Positives = 68/103 (66%)
Query: 222 ELFKFLEKYRPESWEAKKQRLXXXXXXXXXXXXDTPTKKPNQIKQGTNTVTRLVVKKKAS 281
+L K KYRPE+ + KKQRL D P K+ ++ G NTVT LV KKA
Sbjct: 90 QLLKLAHKYRPETKQEKKQRLLARAEKKAAGKRDVPPKRVPVLQAGVNTVTTLVENKKAQ 149
Query: 282 LVIIAHDVDPIELVLFLPALCRKMGIPYCIVDSSDKANLAKLI 324
LV+IAHDVDPIELV+FLPALCRKMG+PYCI+ D+ L +L+
Sbjct: 150 LVMIAHDVDPIELVVFLPALCRKMGVPYCIIKGKDR--LGRLV 190
Score = 230 (86.0 bits), Expect = 8.8e-32, Sum P(2) = 8.8e-32
Identities = 53/101 (52%), Positives = 67/101 (66%)
Query: 38 LFEKKARNFGIGQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLKVPPPVHQFTQAVDKQ 97
LFEK+ +NFGIGQDIQPKRDL KWP YIR+Q+Q+A+L KRLKVPP ++QFTQA+D+Q
Sbjct: 31 LFEKRPKNFGIGQDIQPKRDL----KWPCYIRLQQQRAILYKRLKVPPAINQFTQALDRQ 86
Query: 98 TGQDIQPKRDLSR-FVKWPKYIRI--QRQKAVLQKRLKVPP 135
T + R K K R+ + +K KR VPP
Sbjct: 87 TATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKR-DVPP 126
Score = 134 (52.2 bits), Expect = 6.8e-47, Sum P(2) = 6.8e-47
Identities = 24/45 (53%), Positives = 32/45 (71%)
Query: 307 IPYCIVDSSDKANLAKLIESVKVNFTDRYDEIRRQWGGGSLGSKS 351
+ + V+S DK LAKL+E+++ N+ DRY EIRR WGG LG KS
Sbjct: 198 VAFTQVNSEDKGALAKLVEAIRANYNDRYGEIRRHWGGNVLGPKS 242
>UNIPROTKB|F1LYB8 [details] [associations]
symbol:F1LYB8 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR004037 PROSITE:PS01082 InterPro:IPR004038
InterPro:IPR001921 Pfam:PF01248 GO:GO:0042254 GO:GO:0030529
InterPro:IPR018492 PRINTS:PR00881 PRINTS:PR00882
GeneTree:ENSGT00390000004753 IPI:IPI00951590
Ensembl:ENSRNOT00000043418 Uniprot:F1LYB8
Length = 260
Score = 369 (135.0 bits), Expect = 6.7e-45, Sum P(2) = 6.7e-45
Identities = 73/129 (56%), Positives = 89/129 (68%)
Query: 99 GQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLKVPPPVHQFTQAVDKQTASQLFKFLEK 158
GQDIQPKRDL+RF+KWP YIR+Q+Q+A+L KRLKVPP ++QFTQA+ +QT +QL K K
Sbjct: 43 GQDIQPKRDLTRFIKWPHYIRLQQQRAILYKRLKVPPAINQFTQALGRQTVTQLLKLAHK 102
Query: 159 YRPESWEAKKQRLXXXXXXXXXXXXDTPTKKPNQIKQGTNTVTRLVVKKKASLVIIAHDV 218
YRPE+ + KKQRL PT++ G NTVT LV KKA LV+I HDV
Sbjct: 103 YRPETKQEKKQRLLARAEKKAAAKGGLPTER----LAGVNTVTTLVENKKAQLVVIGHDV 158
Query: 219 DPIELFKFL 227
DP EL FL
Sbjct: 159 DPFELVVFL 167
Score = 253 (94.1 bits), Expect = 5.3e-45, Sum P(2) = 5.3e-45
Identities = 44/61 (72%), Positives = 56/61 (91%)
Query: 38 LFEKKARNFGIGQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLKVPPPVHQFTQAVDKQ 97
LFEK+ +NFGIGQDIQPKRDL+RF+KWP YIR+Q+Q+A+L KRLKVPP ++QFTQA+ +Q
Sbjct: 32 LFEKRPKNFGIGQDIQPKRDLTRFIKWPHYIRLQQQRAILYKRLKVPPAINQFTQALGRQ 91
Query: 98 T 98
T
Sbjct: 92 T 92
Score = 237 (88.5 bits), Expect = 5.3e-45, Sum P(2) = 5.3e-45
Identities = 50/103 (48%), Positives = 62/103 (60%)
Query: 222 ELFKFLEKYRPESWEAKKQRLXXXXXXXXXXXXDTPTKKPNQIKQGTNTVTRLVVKKKAS 281
+L K KYRPE+ + KKQRL PT++ G NTVT LV KKA
Sbjct: 95 QLLKLAHKYRPETKQEKKQRLLARAEKKAAAKGGLPTER----LAGVNTVTTLVENKKAQ 150
Query: 282 LVIIAHDVDPIELVLFLPALCRKMGIPYCIVDSSDKANLAKLI 324
LV+I HDVDP ELV+FLP LC+KM +PYCI+ KA L +L+
Sbjct: 151 LVVIGHDVDPFELVVFLPVLCQKMRVPYCIIKG--KARLGRLV 191
Score = 120 (47.3 bits), Expect = 6.7e-45, Sum P(2) = 6.7e-45
Identities = 26/51 (50%), Positives = 34/51 (66%)
Query: 303 RKM--GIPYCIVDSSDKANLAKLIESVKVNFTDRYDEIRRQWGGGSLGSKS 351
RKM + + V+S DK LAKL+E+++ + D YDEIRR WGG LG KS
Sbjct: 193 RKMCTTVAFTQVNSEDKGALAKLVEAIRT-YNDIYDEIRRHWGGNVLGPKS 242
>ASPGD|ASPL0000029714 [details] [associations]
symbol:AN5520 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] InterPro:IPR004037 PROSITE:PS01082 InterPro:IPR004038
InterPro:IPR001921 Pfam:PF01248 GO:GO:0042254 EMBL:BN001305
GO:GO:0030529 InterPro:IPR018492 PRINTS:PR00881
HOGENOM:HOG000216644 PANTHER:PTHR23105:SF1 PRINTS:PR00882
OMA:YRPETKV EnsemblFungi:CADANIAT00003565 Uniprot:C8VG95
Length = 264
Score = 369 (135.0 bits), Expect = 7.6e-44, Sum P(2) = 7.6e-44
Identities = 74/130 (56%), Positives = 89/130 (68%)
Query: 99 GQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLKVPPPVHQFTQAVDKQTASQLFKFLEK 158
GQDIQPKR+L RFVKWP+Y+R+QRQK +L RLKVPP + QF +D+ TA+Q FKFL K
Sbjct: 42 GQDIQPKRNLGRFVKWPEYVRLQRQKKILNLRLKVPPSIAQFQNTLDRNTAAQTFKFLNK 101
Query: 159 YRPESWEAKKQRLXXXXXXXXXXXX-DTPTKKPNQIKQGTNTVTRLVVKKKASLVIIAHD 217
YRPE+ KK+RL + +KKP +K G N V LV KKASLV+IAHD
Sbjct: 102 YRPETKVEKKERLHAEATAVAEGKKKEDVSKKPYNVKYGLNHVVGLVENKKASLVLIAHD 161
Query: 218 VDPIELFKFL 227
VDPIEL FL
Sbjct: 162 VDPIELVVFL 171
Score = 265 (98.3 bits), Expect = 6.1e-23, P = 6.1e-23
Identities = 66/159 (41%), Positives = 87/159 (54%)
Query: 188 KKPNQIK-QGTNTVTRLVVKKKASLVIIAHDVD---PIELFKFLEKYRPESWEAKKQRLX 243
K P ++ Q + L +K S+ + +D + FKFL KYRPE+ KK+RL
Sbjct: 56 KWPEYVRLQRQKKILNLRLKVPPSIAQFQNTLDRNTAAQTFKFLNKYRPETKVEKKERLH 115
Query: 244 XXXXXXXXXXX-DTPTKKPNQIKQGTNTVTRLVVKKKASLVIIAHDVDPIELVLFLPALC 302
+ +KKP +K G N V LV KKASLV+IAHDVDPIELV+FLPALC
Sbjct: 116 AEATAVAEGKKKEDVSKKPYNVKYGLNHVVGLVENKKASLVLIAHDVDPIELVVFLPALC 175
Query: 303 RKMGIPYCIVDSSDKANLAKLIESVKVNFTDRYDEIRRQ 341
RKMG+PY IV KA L ++ K + E+R +
Sbjct: 176 RKMGVPYAIVKG--KARLGTVVHK-KTSAVLAITEVRSE 211
Score = 228 (85.3 bits), Expect = 4.7e-29, Sum P(2) = 4.7e-29
Identities = 40/61 (65%), Positives = 50/61 (81%)
Query: 38 LFEKKARNFGIGQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLKVPPPVHQFTQAVDKQ 97
L EK++RNFGIGQDIQPKR+L RFVKWP+Y+R+QRQK +L RLKVPP + QF +D+
Sbjct: 31 LIEKRSRNFGIGQDIQPKRNLGRFVKWPEYVRLQRQKKILNLRLKVPPSIAQFQNTLDRN 90
Query: 98 T 98
T
Sbjct: 91 T 91
Score = 110 (43.8 bits), Expect = 7.6e-44, Sum P(2) = 7.6e-44
Identities = 19/40 (47%), Positives = 29/40 (72%)
Query: 312 VDSSDKANLAKLIESVKVNFTDRYDEIRRQWGGGSLGSKS 351
V S DKA AKL+ ++K ++D+ +E RR WGGG +G+K+
Sbjct: 208 VRSEDKAEFAKLLSAIKEGYSDKTEESRRHWGGGIMGAKA 247
>UNIPROTKB|D4A8X2 [details] [associations]
symbol:D4A8X2 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR004037 PROSITE:PS01082 InterPro:IPR004038
InterPro:IPR001921 Pfam:PF01248 GO:GO:0042254 GO:GO:0030529
InterPro:IPR018492 PRINTS:PR00881 PRINTS:PR00882
GeneTree:ENSGT00390000004753 OrthoDB:EOG4B8JDV IPI:IPI00557150
Ensembl:ENSRNOT00000039882 Uniprot:D4A8X2
Length = 266
Score = 344 (126.2 bits), Expect = 2.5e-43, Sum P(2) = 2.5e-43
Identities = 75/151 (49%), Positives = 97/151 (64%)
Query: 78 QKRLKVPPPVHQFTQAVDKQTGQDIQPKRDLSRFVKWPKYIRIQ-RQKAVLQKRLKVPPP 136
Q+ KV P+ + + + GQD QPKRDL+RFVKWP ++ + L KRLKVPP
Sbjct: 22 QEAKKVVNPLFE-KRPTNFGIGQDSQPKRDLTRFVKWPTTSDCSSKEPSSLYKRLKVPPA 80
Query: 137 VHQFTQAVDKQTASQLFKFLEKYRPESWEAKKQRLXXXXXXXXXXXXDTPTKKPNQIKQG 196
++QFTQA+D+QTA+QL K KYRPE+ + +KQRL D PT++P ++ G
Sbjct: 81 INQFTQALDRQTATQLLKLTHKYRPET-KQEKQRLLARAEKKAAGRGDLPTERPPALQAG 139
Query: 197 TNTVTRLVVKKKASLVIIAHDVDPIELFKFL 227
NTVT LV KKA LV+IAH VDPIEL FL
Sbjct: 140 VNTVTTLVENKKAQLVVIAHAVDPIELVVFL 170
Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 62/140 (44%), Positives = 81/140 (57%)
Query: 186 PTKKPNQIKQGTNTVTRLVVKKKASLVIIAHDVDPI-ELFKFLEKYRPESWEAKKQRLXX 244
PT K+ ++ RL V + A D +L K KYRPE+ + +KQRL
Sbjct: 58 PTTSDCSSKEPSSLYKRLKVPPAINQFTQALDRQTATQLLKLTHKYRPET-KQEKQRLLA 116
Query: 245 XXXXXXXXXXDTPTKKPNQIKQGTNTVTRLVVKKKASLVIIAHDVDPIELVLFLPALCRK 304
D PT++P ++ G NTVT LV KKA LV+IAH VDPIELV+FLPALCR+
Sbjct: 117 RAEKKAAGRGDLPTERPPALQAGVNTVTTLVENKKAQLVVIAHAVDPIELVVFLPALCRR 176
Query: 305 MGIPYCIVDSSDKANLAKLI 324
MG+PYCI+ KA L +L+
Sbjct: 177 MGVPYCIIKG--KATLGRLV 194
Score = 201 (75.8 bits), Expect = 2.5e-28, Sum P(2) = 2.5e-28
Identities = 39/66 (59%), Positives = 49/66 (74%)
Query: 38 LFEKKARNFGIGQDIQPKRDLSRFVKWPKYIRIQ-RQKAVLQKRLKVPPPVHQFTQAVDK 96
LFEK+ NFGIGQD QPKRDL+RFVKWP ++ + L KRLKVPP ++QFTQA+D+
Sbjct: 31 LFEKRPTNFGIGQDSQPKRDLTRFVKWPTTSDCSSKEPSSLYKRLKVPPAINQFTQALDR 90
Query: 97 QTGQDI 102
QT +
Sbjct: 91 QTATQL 96
Score = 130 (50.8 bits), Expect = 2.5e-43, Sum P(2) = 2.5e-43
Identities = 23/45 (51%), Positives = 33/45 (73%)
Query: 307 IPYCIVDSSDKANLAKLIESVKVNFTDRYDEIRRQWGGGSLGSKS 351
+ + V+S +K+ LAKL+E+++ N+ DRYDEI R WGG LG KS
Sbjct: 202 VAFTQVNSEEKSALAKLVEAIRTNYNDRYDEICRHWGGNVLGPKS 246
>CGD|CAL0005018 [details] [associations]
symbol:RPL8B species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR004037
PROSITE:PS01082 CGD:CAL0005018 InterPro:IPR004038
InterPro:IPR001921 Pfam:PF01248 GO:GO:0042254 GO:GO:0030529
EMBL:AACQ01000003 EMBL:AACQ01000004 eggNOG:COG1358
InterPro:IPR018492 PRINTS:PR00881 HOGENOM:HOG000216644 KO:K02936
PANTHER:PTHR23105:SF1 PRINTS:PR00882 RefSeq:XP_723064.1
RefSeq:XP_723211.1 ProteinModelPortal:Q5ANA1 SMR:Q5ANA1
STRING:Q5ANA1 GeneID:3635198 GeneID:3635417 KEGG:cal:CaO19.13423
KEGG:cal:CaO19.6002 Uniprot:Q5ANA1
Length = 262
Score = 351 (128.6 bits), Expect = 8.5e-43, Sum P(2) = 8.5e-43
Identities = 71/130 (54%), Positives = 87/130 (66%)
Query: 99 GQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLKVPPPVHQFTQAVDKQTASQLFKFLEK 158
GQ IQPKR+LSRFVKWP+Y+R+QRQK +L RLKVPP + QF+Q +DK TA+Q FK L K
Sbjct: 38 GQSIQPKRNLSRFVKWPEYVRLQRQKKILSLRLKVPPSIAQFSQTLDKNTAAQAFKLLNK 97
Query: 159 YRPESWEAKKQRLXXXXXXXXXX-XXDTPTKKPNQIKQGTNTVTRLVVKKKASLVIIAHD 217
YRPE+ KK+RL + KP +K G N V L+ KKA LV+IA+D
Sbjct: 98 YRPETSAEKKERLTKEAAAIAEGKTAKDVSPKPVVVKYGLNHVVSLIENKKAKLVLIAND 157
Query: 218 VDPIELFKFL 227
VDPIEL FL
Sbjct: 158 VDPIELVVFL 167
Score = 237 (88.5 bits), Expect = 7.7e-31, Sum P(2) = 7.7e-31
Identities = 58/142 (40%), Positives = 77/142 (54%)
Query: 188 KKPNQIK-QGTNTVTRLVVKKKASLVIIAHDVDP---IELFKFLEKYRPESWEAKKQRLX 243
K P ++ Q + L +K S+ + +D + FK L KYRPE+ KK+RL
Sbjct: 52 KWPEYVRLQRQKKILSLRLKVPPSIAQFSQTLDKNTAAQAFKLLNKYRPETSAEKKERLT 111
Query: 244 XXXXXXXXX-XXDTPTKKPNQIKQGTNTVTRLVVKKKASLVIIAHDVDPIELVLFLPALC 302
+ KP +K G N V L+ KKA LV+IA+DVDPIELV+FLPALC
Sbjct: 112 KEAAAIAEGKTAKDVSPKPVVVKYGLNHVVSLIENKKAKLVLIANDVDPIELVVFLPALC 171
Query: 303 RKMGIPYCIVDSSDKANLAKLI 324
+KMG+PY IV KA L L+
Sbjct: 172 KKMGVPYAIVKG--KARLGTLV 191
Score = 229 (85.7 bits), Expect = 5.3e-30, Sum P(2) = 5.3e-30
Identities = 41/61 (67%), Positives = 50/61 (81%)
Query: 38 LFEKKARNFGIGQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLKVPPPVHQFTQAVDKQ 97
LFE +NFGIGQ IQPKR+LSRFVKWP+Y+R+QRQK +L RLKVPP + QF+Q +DK
Sbjct: 27 LFESTPKNFGIGQSIQPKRNLSRFVKWPEYVRLQRQKKILSLRLKVPPSIAQFSQTLDKN 86
Query: 98 T 98
T
Sbjct: 87 T 87
Score = 118 (46.6 bits), Expect = 8.5e-43, Sum P(2) = 8.5e-43
Identities = 19/40 (47%), Positives = 32/40 (80%)
Query: 312 VDSSDKANLAKLIESVKVNFTDRYDEIRRQWGGGSLGSKS 351
V+S+D+A L+KLI ++ N+ ++Y+E R+ WGGG +GSK+
Sbjct: 204 VNSADEAELSKLISTINANYIEKYEENRKHWGGGIMGSKA 243
>UNIPROTKB|Q5ANA1 [details] [associations]
symbol:RPL8B "Likely cytosolic ribosomal protein L8"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR004037
PROSITE:PS01082 CGD:CAL0005018 InterPro:IPR004038
InterPro:IPR001921 Pfam:PF01248 GO:GO:0042254 GO:GO:0030529
EMBL:AACQ01000003 EMBL:AACQ01000004 eggNOG:COG1358
InterPro:IPR018492 PRINTS:PR00881 HOGENOM:HOG000216644 KO:K02936
PANTHER:PTHR23105:SF1 PRINTS:PR00882 RefSeq:XP_723064.1
RefSeq:XP_723211.1 ProteinModelPortal:Q5ANA1 SMR:Q5ANA1
STRING:Q5ANA1 GeneID:3635198 GeneID:3635417 KEGG:cal:CaO19.13423
KEGG:cal:CaO19.6002 Uniprot:Q5ANA1
Length = 262
Score = 351 (128.6 bits), Expect = 8.5e-43, Sum P(2) = 8.5e-43
Identities = 71/130 (54%), Positives = 87/130 (66%)
Query: 99 GQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLKVPPPVHQFTQAVDKQTASQLFKFLEK 158
GQ IQPKR+LSRFVKWP+Y+R+QRQK +L RLKVPP + QF+Q +DK TA+Q FK L K
Sbjct: 38 GQSIQPKRNLSRFVKWPEYVRLQRQKKILSLRLKVPPSIAQFSQTLDKNTAAQAFKLLNK 97
Query: 159 YRPESWEAKKQRLXXXXXXXXXX-XXDTPTKKPNQIKQGTNTVTRLVVKKKASLVIIAHD 217
YRPE+ KK+RL + KP +K G N V L+ KKA LV+IA+D
Sbjct: 98 YRPETSAEKKERLTKEAAAIAEGKTAKDVSPKPVVVKYGLNHVVSLIENKKAKLVLIAND 157
Query: 218 VDPIELFKFL 227
VDPIEL FL
Sbjct: 158 VDPIELVVFL 167
Score = 237 (88.5 bits), Expect = 7.7e-31, Sum P(2) = 7.7e-31
Identities = 58/142 (40%), Positives = 77/142 (54%)
Query: 188 KKPNQIK-QGTNTVTRLVVKKKASLVIIAHDVDP---IELFKFLEKYRPESWEAKKQRLX 243
K P ++ Q + L +K S+ + +D + FK L KYRPE+ KK+RL
Sbjct: 52 KWPEYVRLQRQKKILSLRLKVPPSIAQFSQTLDKNTAAQAFKLLNKYRPETSAEKKERLT 111
Query: 244 XXXXXXXXX-XXDTPTKKPNQIKQGTNTVTRLVVKKKASLVIIAHDVDPIELVLFLPALC 302
+ KP +K G N V L+ KKA LV+IA+DVDPIELV+FLPALC
Sbjct: 112 KEAAAIAEGKTAKDVSPKPVVVKYGLNHVVSLIENKKAKLVLIANDVDPIELVVFLPALC 171
Query: 303 RKMGIPYCIVDSSDKANLAKLI 324
+KMG+PY IV KA L L+
Sbjct: 172 KKMGVPYAIVKG--KARLGTLV 191
Score = 229 (85.7 bits), Expect = 5.3e-30, Sum P(2) = 5.3e-30
Identities = 41/61 (67%), Positives = 50/61 (81%)
Query: 38 LFEKKARNFGIGQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLKVPPPVHQFTQAVDKQ 97
LFE +NFGIGQ IQPKR+LSRFVKWP+Y+R+QRQK +L RLKVPP + QF+Q +DK
Sbjct: 27 LFESTPKNFGIGQSIQPKRNLSRFVKWPEYVRLQRQKKILSLRLKVPPSIAQFSQTLDKN 86
Query: 98 T 98
T
Sbjct: 87 T 87
Score = 118 (46.6 bits), Expect = 8.5e-43, Sum P(2) = 8.5e-43
Identities = 19/40 (47%), Positives = 32/40 (80%)
Query: 312 VDSSDKANLAKLIESVKVNFTDRYDEIRRQWGGGSLGSKS 351
V+S+D+A L+KLI ++ N+ ++Y+E R+ WGGG +GSK+
Sbjct: 204 VNSADEAELSKLISTINANYIEKYEENRKHWGGGIMGSKA 243
>CGD|CAL0000666 [details] [associations]
symbol:RPL82 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR004037
PROSITE:PS01082 CGD:CAL0000666 InterPro:IPR004038
InterPro:IPR001921 Pfam:PF01248 GO:GO:0042254 GO:GO:0030529
EMBL:AACQ01000114 EMBL:AACQ01000113 eggNOG:COG1358
InterPro:IPR018492 PRINTS:PR00881 HOGENOM:HOG000216644 KO:K02936
PANTHER:PTHR23105:SF1 PRINTS:PR00882 RefSeq:XP_713916.1
RefSeq:XP_713974.1 ProteinModelPortal:Q59WJ0 SMR:Q59WJ0
STRING:Q59WJ0 GeneID:3644365 GeneID:3644419 KEGG:cal:CaO19.2311
KEGG:cal:CaO19.9847 Uniprot:Q59WJ0
Length = 262
Score = 351 (128.6 bits), Expect = 1.1e-42, Sum P(2) = 1.1e-42
Identities = 71/130 (54%), Positives = 87/130 (66%)
Query: 99 GQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLKVPPPVHQFTQAVDKQTASQLFKFLEK 158
GQ IQPKR+LSRFVKWP+Y+R+QRQK +L RLKVPP + QF+Q +DK TA+Q FK L K
Sbjct: 39 GQSIQPKRNLSRFVKWPEYVRLQRQKKILSLRLKVPPSIAQFSQTLDKNTAAQAFKLLNK 98
Query: 159 YRPESWEAKKQRLXXXXXXXXXX-XXDTPTKKPNQIKQGTNTVTRLVVKKKASLVIIAHD 217
YRPE+ KK+RL + KP +K G N V L+ KKA LV+IA+D
Sbjct: 99 YRPETSAEKKERLTKEAAAIAEGKTAKDVSPKPVVVKYGLNHVVSLIENKKAKLVLIAND 158
Query: 218 VDPIELFKFL 227
VDPIEL FL
Sbjct: 159 VDPIELVVFL 168
Score = 237 (88.5 bits), Expect = 9.9e-31, Sum P(2) = 9.9e-31
Identities = 58/142 (40%), Positives = 77/142 (54%)
Query: 188 KKPNQIK-QGTNTVTRLVVKKKASLVIIAHDVDP---IELFKFLEKYRPESWEAKKQRLX 243
K P ++ Q + L +K S+ + +D + FK L KYRPE+ KK+RL
Sbjct: 53 KWPEYVRLQRQKKILSLRLKVPPSIAQFSQTLDKNTAAQAFKLLNKYRPETSAEKKERLT 112
Query: 244 XXXXXXXXX-XXDTPTKKPNQIKQGTNTVTRLVVKKKASLVIIAHDVDPIELVLFLPALC 302
+ KP +K G N V L+ KKA LV+IA+DVDPIELV+FLPALC
Sbjct: 113 KEAAAIAEGKTAKDVSPKPVVVKYGLNHVVSLIENKKAKLVLIANDVDPIELVVFLPALC 172
Query: 303 RKMGIPYCIVDSSDKANLAKLI 324
+KMG+PY IV KA L L+
Sbjct: 173 KKMGVPYAIVKG--KARLGTLV 192
Score = 229 (85.7 bits), Expect = 6.8e-30, Sum P(2) = 6.8e-30
Identities = 41/61 (67%), Positives = 50/61 (81%)
Query: 38 LFEKKARNFGIGQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLKVPPPVHQFTQAVDKQ 97
LFE +NFGIGQ IQPKR+LSRFVKWP+Y+R+QRQK +L RLKVPP + QF+Q +DK
Sbjct: 28 LFESTPKNFGIGQSIQPKRNLSRFVKWPEYVRLQRQKKILSLRLKVPPSIAQFSQTLDKN 87
Query: 98 T 98
T
Sbjct: 88 T 88
Score = 117 (46.2 bits), Expect = 1.1e-42, Sum P(2) = 1.1e-42
Identities = 18/40 (45%), Positives = 32/40 (80%)
Query: 312 VDSSDKANLAKLIESVKVNFTDRYDEIRRQWGGGSLGSKS 351
V+S+D+A L+KL+ ++ N+ ++Y+E R+ WGGG +GSK+
Sbjct: 205 VNSADEAELSKLVSTINANYIEKYEENRKHWGGGIMGSKA 244
>UNIPROTKB|Q59WJ0 [details] [associations]
symbol:RPL82 "Likely cytosolic ribosomal protein L8"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR004037
PROSITE:PS01082 CGD:CAL0000666 InterPro:IPR004038
InterPro:IPR001921 Pfam:PF01248 GO:GO:0042254 GO:GO:0030529
EMBL:AACQ01000114 EMBL:AACQ01000113 eggNOG:COG1358
InterPro:IPR018492 PRINTS:PR00881 HOGENOM:HOG000216644 KO:K02936
PANTHER:PTHR23105:SF1 PRINTS:PR00882 RefSeq:XP_713916.1
RefSeq:XP_713974.1 ProteinModelPortal:Q59WJ0 SMR:Q59WJ0
STRING:Q59WJ0 GeneID:3644365 GeneID:3644419 KEGG:cal:CaO19.2311
KEGG:cal:CaO19.9847 Uniprot:Q59WJ0
Length = 262
Score = 351 (128.6 bits), Expect = 1.1e-42, Sum P(2) = 1.1e-42
Identities = 71/130 (54%), Positives = 87/130 (66%)
Query: 99 GQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLKVPPPVHQFTQAVDKQTASQLFKFLEK 158
GQ IQPKR+LSRFVKWP+Y+R+QRQK +L RLKVPP + QF+Q +DK TA+Q FK L K
Sbjct: 39 GQSIQPKRNLSRFVKWPEYVRLQRQKKILSLRLKVPPSIAQFSQTLDKNTAAQAFKLLNK 98
Query: 159 YRPESWEAKKQRLXXXXXXXXXX-XXDTPTKKPNQIKQGTNTVTRLVVKKKASLVIIAHD 217
YRPE+ KK+RL + KP +K G N V L+ KKA LV+IA+D
Sbjct: 99 YRPETSAEKKERLTKEAAAIAEGKTAKDVSPKPVVVKYGLNHVVSLIENKKAKLVLIAND 158
Query: 218 VDPIELFKFL 227
VDPIEL FL
Sbjct: 159 VDPIELVVFL 168
Score = 237 (88.5 bits), Expect = 9.9e-31, Sum P(2) = 9.9e-31
Identities = 58/142 (40%), Positives = 77/142 (54%)
Query: 188 KKPNQIK-QGTNTVTRLVVKKKASLVIIAHDVDP---IELFKFLEKYRPESWEAKKQRLX 243
K P ++ Q + L +K S+ + +D + FK L KYRPE+ KK+RL
Sbjct: 53 KWPEYVRLQRQKKILSLRLKVPPSIAQFSQTLDKNTAAQAFKLLNKYRPETSAEKKERLT 112
Query: 244 XXXXXXXXX-XXDTPTKKPNQIKQGTNTVTRLVVKKKASLVIIAHDVDPIELVLFLPALC 302
+ KP +K G N V L+ KKA LV+IA+DVDPIELV+FLPALC
Sbjct: 113 KEAAAIAEGKTAKDVSPKPVVVKYGLNHVVSLIENKKAKLVLIANDVDPIELVVFLPALC 172
Query: 303 RKMGIPYCIVDSSDKANLAKLI 324
+KMG+PY IV KA L L+
Sbjct: 173 KKMGVPYAIVKG--KARLGTLV 192
Score = 229 (85.7 bits), Expect = 6.8e-30, Sum P(2) = 6.8e-30
Identities = 41/61 (67%), Positives = 50/61 (81%)
Query: 38 LFEKKARNFGIGQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLKVPPPVHQFTQAVDKQ 97
LFE +NFGIGQ IQPKR+LSRFVKWP+Y+R+QRQK +L RLKVPP + QF+Q +DK
Sbjct: 28 LFESTPKNFGIGQSIQPKRNLSRFVKWPEYVRLQRQKKILSLRLKVPPSIAQFSQTLDKN 87
Query: 98 T 98
T
Sbjct: 88 T 88
Score = 117 (46.2 bits), Expect = 1.1e-42, Sum P(2) = 1.1e-42
Identities = 18/40 (45%), Positives = 32/40 (80%)
Query: 312 VDSSDKANLAKLIESVKVNFTDRYDEIRRQWGGGSLGSKS 351
V+S+D+A L+KL+ ++ N+ ++Y+E R+ WGGG +GSK+
Sbjct: 205 VNSADEAELSKLVSTINANYIEKYEENRKHWGGGIMGSKA 244
>TAIR|locus:2081715 [details] [associations]
symbol:AT3G62870 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0022626 "cytosolic ribosome" evidence=IDA] [GO:0005774
"vacuolar membrane" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=RCA] [GO:0001510 "RNA methylation"
evidence=RCA] InterPro:IPR004037 PROSITE:PS01082 InterPro:IPR004038
InterPro:IPR001921 Pfam:PF01248 GO:GO:0005774 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0042254 EMBL:AL162651 GO:GO:0022625
eggNOG:COG1358 InterPro:IPR018492 PRINTS:PR00881
HOGENOM:HOG000216644 KO:K02936 ProtClustDB:CLSN2683620
PANTHER:PTHR23105:SF1 PRINTS:PR00882 EMBL:AY052264 EMBL:AY060519
EMBL:AY062758 EMBL:AY114667 EMBL:AY086353 IPI:IPI00535564
PIR:T48076 RefSeq:NP_191846.1 UniGene:At.22352 UniGene:At.67716
ProteinModelPortal:Q9LZH9 SMR:Q9LZH9 STRING:Q9LZH9 PaxDb:Q9LZH9
PRIDE:Q9LZH9 EnsemblPlants:AT3G62870.1 GeneID:825462
KEGG:ath:AT3G62870 TAIR:At3g62870 InParanoid:Q9LZH9 OMA:REDEAQQ
PhylomeDB:Q9LZH9 Genevestigator:Q9LZH9 GermOnline:AT3G62870
Uniprot:Q9LZH9
Length = 256
Score = 336 (123.3 bits), Expect = 2.2e-42, Sum P(2) = 2.2e-42
Identities = 68/129 (52%), Positives = 88/129 (68%)
Query: 99 GQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLKVPPPVHQFTQAVDKQTASQLFKFLEK 158
G + PK+DLSR++KWPK IR+QRQK +L++RLKVPP ++QFT+ +DK A+ LFK L K
Sbjct: 33 GGALPPKKDLSRYIKWPKSIRLQRQKRILKQRLKVPPALNQFTKTLDKNLATSLFKILLK 92
Query: 159 YRPESWEAKKQRLXXXXXXXXXXXXDTPTKKPNQIKQGTNTVTRLVVKKKASLVIIAHDV 218
YRPE AKK+RL +KKP +K G N VT L+ + KA LV+IAHDV
Sbjct: 93 YRPEDKAAKKERLLNKAQAEAEGK-PAESKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDV 151
Query: 219 DPIELFKFL 227
DPIEL +L
Sbjct: 152 DPIELVVWL 160
Score = 243 (90.6 bits), Expect = 1.4e-40, Sum P(2) = 1.4e-40
Identities = 51/95 (53%), Positives = 61/95 (64%)
Query: 223 LFKFLEKYRPESWEAKKQRLXXXXXXXXXXXXDTPTKKPNQIKQGTNTVTRLVVKKKASL 282
LFK L KYRPE AKK+RL +KKP +K G N VT L+ + KA L
Sbjct: 86 LFKILLKYRPEDKAAKKERLLNKAQAEAEGK-PAESKKPIVVKYGLNHVTYLIEQNKAQL 144
Query: 283 VIIAHDVDPIELVLFLPALCRKMGIPYCIVDSSDK 317
V+IAHDVDPIELV++LPALCRKM +PYCIV +
Sbjct: 145 VVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSR 179
Score = 205 (77.2 bits), Expect = 1.4e-40, Sum P(2) = 1.4e-40
Identities = 35/59 (59%), Positives = 50/59 (84%)
Query: 38 LFEKKARNFGIGQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLKVPPPVHQFTQAVDK 96
LFE++ + FGIG + PK+DLSR++KWPK IR+QRQK +L++RLKVPP ++QFT+ +DK
Sbjct: 22 LFERRPKQFGIGGALPPKKDLSRYIKWPKSIRLQRQKRILKQRLKVPPALNQFTKTLDK 80
Score = 129 (50.5 bits), Expect = 2.2e-42, Sum P(2) = 2.2e-42
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 303 RKMGIPYCI--VDSSDKANLAKLIESVKVNFTDRYDEIRRQWGGGSLGSKS 351
+K C+ V + DK +K++E++K NF D+Y+E R++WGGG +GSKS
Sbjct: 186 QKTAAALCLTTVKNEDKLEFSKILEAIKANFNDKYEEYRKKWGGGIMGSKS 236
>SGD|S000001025 [details] [associations]
symbol:RPL8A "Ribosomal 60S subunit protein L8A" species:4932
"Saccharomyces cerevisiae" [GO:0022625 "cytosolic large ribosomal
subunit" evidence=TAS] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=TAS] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0002181 "cytoplasmic translation" evidence=TAS]
InterPro:IPR004037 PROSITE:PS01082 InterPro:IPR004038
InterPro:IPR001921 Pfam:PF01248 SGD:S000001025 EMBL:BK006934
GO:GO:0042254 GO:GO:0003735 GO:GO:0002181 EMBL:U11583 PDB:4B6A
PDBsum:4B6A GO:GO:0022625 InterPro:IPR018492 PRINTS:PR00881
PDB:1K5Y PDB:1S1I PDB:3IZS PDB:3O58 PDB:3O5H PDB:3U5E PDB:3U5I
PDBsum:1K5Y PDBsum:1S1I PDBsum:3IZS PDBsum:3O58 PDBsum:3O5H
PDBsum:3U5E PDBsum:3U5I HOGENOM:HOG000216644 KO:K02936
PANTHER:PTHR23105:SF1 PRINTS:PR00882 GeneTree:ENSGT00390000004753
EMBL:X17204 EMBL:X56836 EMBL:U17361 PIR:S16811 RefSeq:NP_011830.1
ProteinModelPortal:P17076 SMR:P17076 DIP:DIP-5102N IntAct:P17076
MINT:MINT-483885 STRING:P17076 PeptideAtlas:P17076 PRIDE:P17076
EnsemblFungi:YHL033C GeneID:856352 KEGG:sce:YHL033C OMA:YRPETKV
OrthoDB:EOG4KWP2Z EvolutionaryTrace:P17076 NextBio:981793
Genevestigator:P17076 GermOnline:YHL033C Uniprot:P17076
Length = 256
Score = 330 (121.2 bits), Expect = 3.2e-41, Sum P(2) = 3.2e-41
Identities = 65/130 (50%), Positives = 84/130 (64%)
Query: 99 GQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLKVPPPVHQFTQAVDKQTASQLFKFLEK 158
GQ +QPKR+LSR+VKWP+Y+R+QRQK +L RLKVPP + QF +D+ TA++ FK K
Sbjct: 37 GQAVQPKRNLSRYVKWPEYVRVQRQKKILSIRLKVPPTIAQFQYTLDRNTAAETFKLFNK 96
Query: 159 YRPESWEAKKQRLXXXXXXXXXXXX-DTPTKKPNQIKQGTNTVTRLVVKKKASLVIIAHD 217
YRPE+ KK+RL + KP +K G N V L+ KKA LV+IA+D
Sbjct: 97 YRPETAAEKKERLTKEAAAVAEGKSKQDASPKPYAVKYGLNHVVALIENKKAKLVLIAND 156
Query: 218 VDPIELFKFL 227
VDPIEL FL
Sbjct: 157 VDPIELVVFL 166
Score = 239 (89.2 bits), Expect = 1.2e-39, Sum P(2) = 1.2e-39
Identities = 54/121 (44%), Positives = 68/121 (56%)
Query: 222 ELFKFLEKYRPESWEAKKQRLXXXXXXXXXXXX-DTPTKKPNQIKQGTNTVTRLVVKKKA 280
E FK KYRPE+ KK+RL + KP +K G N V L+ KKA
Sbjct: 89 ETFKLFNKYRPETAAEKKERLTKEAAAVAEGKSKQDASPKPYAVKYGLNHVVALIENKKA 148
Query: 281 SLVIIAHDVDPIELVLFLPALCRKMGIPYCIVDSSDKANLAKLIESVKVNFTDRYDEIRR 340
LV+IA+DVDPIELV+FLPALC+KMG+PY IV KA L L+ K + E+R
Sbjct: 149 KLVLIANDVDPIELVVFLPALCKKMGVPYAIVKG--KARLGTLVNQ-KTSAVAALTEVRA 205
Query: 341 Q 341
+
Sbjct: 206 E 206
Score = 200 (75.5 bits), Expect = 1.2e-39, Sum P(2) = 1.2e-39
Identities = 34/58 (58%), Positives = 46/58 (79%)
Query: 44 RNFGIGQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLKVPPPVHQFTQAVDKQTGQD 101
+NFGIGQ +QPKR+LSR+VKWP+Y+R+QRQK +L RLKVPP + QF +D+ T +
Sbjct: 32 KNFGIGQAVQPKRNLSRYVKWPEYVRVQRQKKILSIRLKVPPTIAQFQYTLDRNTAAE 89
Score = 124 (48.7 bits), Expect = 3.2e-41, Sum P(2) = 3.2e-41
Identities = 20/40 (50%), Positives = 31/40 (77%)
Query: 312 VDSSDKANLAKLIESVKVNFTDRYDEIRRQWGGGSLGSKS 351
V + D+A LAKL+ ++ NF D+YDE+++ WGGG LG+K+
Sbjct: 203 VRAEDEAALAKLVSTIDANFADKYDEVKKHWGGGILGNKA 242
>UNIPROTKB|Q5T8U3 [details] [associations]
symbol:RPL7A "60S ribosomal protein L7a" species:9606 "Homo
sapiens" [GO:0005840 "ribosome" evidence=IEA] InterPro:IPR004038
InterPro:IPR001921 Pfam:PF01248 GO:GO:0005840 EMBL:AL158826
InterPro:IPR018492 PRINTS:PR00881 HOGENOM:HOG000216644
PRINTS:PR00882 ChiTaRS:RPL7A UniGene:Hs.499839 HGNC:HGNC:10364
IPI:IPI00478896 SMR:Q5T8U3 MINT:MINT-1375407 STRING:Q5T8U3
Ensembl:ENST00000426651 Uniprot:Q5T8U3
Length = 191
Score = 415 (151.1 bits), Expect = 7.8e-39, P = 7.8e-39
Identities = 78/123 (63%), Positives = 94/123 (76%)
Query: 99 GQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLKVPPPVHQFTQAVDKQTASQLFKFLEK 158
GQDIQPKRDL+RFVKWP+YIR+QRQ+A+L KRLKVPP ++QFTQA+D+QTA+QL K K
Sbjct: 69 GQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALDRQTATQLLKLAHK 128
Query: 159 YRPESWEAKKQRLXXXXXXXXXXXXDTPTKKPNQIKQGTNTVTRLVVKKKASLVIIAHDV 218
YRPE+ + KKQRL D PTK+P ++ G NTVT LV KKA LV+IAHDV
Sbjct: 129 YRPETKQEKKQRLLARAEKKAAGKGDVPTKRPPVLRAGVNTVTTLVENKKAQLVVIAHDV 188
Query: 219 DPI 221
DPI
Sbjct: 189 DPI 191
Score = 269 (99.8 bits), Expect = 4.1e-41, Sum P(2) = 4.1e-41
Identities = 47/65 (72%), Positives = 59/65 (90%)
Query: 38 LFEKKARNFGIGQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLKVPPPVHQFTQAVDKQ 97
LFEK+ +NFGIGQDIQPKRDL+RFVKWP+YIR+QRQ+A+L KRLKVPP ++QFTQA+D+Q
Sbjct: 58 LFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALDRQ 117
Query: 98 TGQDI 102
T +
Sbjct: 118 TATQL 122
Score = 184 (69.8 bits), Expect = 4.1e-41, Sum P(2) = 4.1e-41
Identities = 37/71 (52%), Positives = 44/71 (61%)
Query: 222 ELFKFLEKYRPESWEAKKQRLXXXXXXXXXXXXDTPTKKPNQIKQGTNTVTRLVVKKKAS 281
+L K KYRPE+ + KKQRL D PTK+P ++ G NTVT LV KKA
Sbjct: 121 QLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPTKRPPVLRAGVNTVTTLVENKKAQ 180
Query: 282 LVIIAHDVDPI 292
LV+IAHDVDPI
Sbjct: 181 LVVIAHDVDPI 191
>SGD|S000003968 [details] [associations]
symbol:RPL8B "Ribosomal 60S subunit protein L8B" species:4932
"Saccharomyces cerevisiae" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0002181 "cytoplasmic translation"
evidence=TAS] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=TAS]
[GO:0003735 "structural constituent of ribosome" evidence=TAS]
InterPro:IPR004037 PROSITE:PS01082 InterPro:IPR004038
InterPro:IPR001921 Pfam:PF01248 SGD:S000003968 EMBL:BK006945
GO:GO:0042254 GO:GO:0003735 GO:GO:0002181 GO:GO:0022625
eggNOG:COG1358 InterPro:IPR018492 PRINTS:PR00881
HOGENOM:HOG000216644 KO:K02936 PANTHER:PTHR23105:SF1 PRINTS:PR00882
GeneTree:ENSGT00390000004753 OMA:QRSILYK OrthoDB:EOG4KWP2Z
EMBL:X56835 EMBL:M88608 EMBL:Z73150 PIR:S16810 RefSeq:NP_013055.1
ProteinModelPortal:P29453 SMR:P29453 IntAct:P29453 STRING:P29453
PaxDb:P29453 PeptideAtlas:P29453 PRIDE:P29453 EnsemblFungi:YLL045C
GeneID:850682 KEGG:sce:YLL045C NextBio:966683 Genevestigator:P29453
GermOnline:YLL045C Uniprot:P29453
Length = 256
Score = 329 (120.9 bits), Expect = 4.1e-41, Sum P(2) = 4.1e-41
Identities = 65/130 (50%), Positives = 84/130 (64%)
Query: 99 GQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLKVPPPVHQFTQAVDKQTASQLFKFLEK 158
GQ +QPKR+LSR+VKWP+Y+R+QRQK +L RLKVPP + QF +D+ TA++ FK K
Sbjct: 37 GQAVQPKRNLSRYVKWPEYVRLQRQKKILSIRLKVPPTIAQFQYTLDRNTAAETFKLFNK 96
Query: 159 YRPESWEAKKQRLXXXXXXXXXXXX-DTPTKKPNQIKQGTNTVTRLVVKKKASLVIIAHD 217
YRPE+ KK+RL + KP +K G N V L+ KKA LV+IA+D
Sbjct: 97 YRPETAAEKKERLTKEAAAIAEGKSKQDASPKPYAVKYGLNHVVSLIENKKAKLVLIAND 156
Query: 218 VDPIELFKFL 227
VDPIEL FL
Sbjct: 157 VDPIELVVFL 166
Score = 238 (88.8 bits), Expect = 1.9e-39, Sum P(2) = 1.9e-39
Identities = 53/121 (43%), Positives = 68/121 (56%)
Query: 222 ELFKFLEKYRPESWEAKKQRLXXXXXXXXXXXX-DTPTKKPNQIKQGTNTVTRLVVKKKA 280
E FK KYRPE+ KK+RL + KP +K G N V L+ KKA
Sbjct: 89 ETFKLFNKYRPETAAEKKERLTKEAAAIAEGKSKQDASPKPYAVKYGLNHVVSLIENKKA 148
Query: 281 SLVIIAHDVDPIELVLFLPALCRKMGIPYCIVDSSDKANLAKLIESVKVNFTDRYDEIRR 340
LV+IA+DVDPIELV+FLPALC+KMG+PY I+ KA L L+ K + E+R
Sbjct: 149 KLVLIANDVDPIELVVFLPALCKKMGVPYAIIKG--KARLGTLVNQ-KTSAVAALTEVRA 205
Query: 341 Q 341
+
Sbjct: 206 E 206
Score = 199 (75.1 bits), Expect = 1.9e-39, Sum P(2) = 1.9e-39
Identities = 34/58 (58%), Positives = 46/58 (79%)
Query: 44 RNFGIGQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLKVPPPVHQFTQAVDKQTGQD 101
+NFGIGQ +QPKR+LSR+VKWP+Y+R+QRQK +L RLKVPP + QF +D+ T +
Sbjct: 32 KNFGIGQAVQPKRNLSRYVKWPEYVRLQRQKKILSIRLKVPPTIAQFQYTLDRNTAAE 89
Score = 124 (48.7 bits), Expect = 4.1e-41, Sum P(2) = 4.1e-41
Identities = 20/40 (50%), Positives = 31/40 (77%)
Query: 312 VDSSDKANLAKLIESVKVNFTDRYDEIRRQWGGGSLGSKS 351
V + D+A LAKL+ ++ NF D+YDE+++ WGGG LG+K+
Sbjct: 203 VRAEDEAALAKLVSTIDANFADKYDEVKKHWGGGILGNKA 242
>GENEDB_PFALCIPARUM|PF14_0231 [details] [associations]
symbol:PF14_0231 "ribosomal protein L7a,
putative" species:5833 "Plasmodium falciparum" [GO:0022625
"cytosolic large ribosomal subunit" evidence=ISS]
InterPro:IPR004038 InterPro:IPR001921 Pfam:PF01248 EMBL:AE014187
GO:GO:0022625 InterPro:IPR018492 PRINTS:PR00881
HOGENOM:HOG000216644 KO:K02936 PANTHER:PTHR23105:SF1 PRINTS:PR00882
RefSeq:XP_001348405.2 ProteinModelPortal:Q8ILL2 IntAct:Q8ILL2
MINT:MINT-1566866 PRIDE:Q8ILL2 EnsemblProtists:PF14_0231:mRNA
GeneID:811813 KEGG:pfa:PF14_0231 EuPathDB:PlasmoDB:PF3D7_1424400
ProtClustDB:CLSZ2444896 Uniprot:Q8ILL2
Length = 283
Score = 315 (115.9 bits), Expect = 3.4e-34, Sum P(2) = 3.4e-34
Identities = 64/129 (49%), Positives = 84/129 (65%)
Query: 99 GQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLKVPPPVHQFTQAVDKQTASQLFKFLEK 158
G ++PK+DLS++VKWP+YIRIQR+K +L +RLKVPP ++QF + K L FL+
Sbjct: 56 GVGVRPKKDLSKYVKWPRYIRIQRKKKILLQRLKVPPSINQFNHTLPKSQTQDLLNFLKA 115
Query: 159 YRPESWEAKKQRLXXXXXXXXXXXXDTPTKKPNQIKQGTNTVTRLVVKKKASLVIIAHDV 218
Y+PES KKQRL T KKP +K G N +T+LV KKA+LV+IA+DV
Sbjct: 116 YKPESKTDKKQRLLNKAKEALNKNI-TKDKKPLFLKYGINHITKLVENKKANLVVIANDV 174
Query: 219 DPIELFKFL 227
PIEL FL
Sbjct: 175 SPIELVLFL 183
Score = 246 (91.7 bits), Expect = 5.8e-40, Sum P(2) = 5.8e-40
Identities = 55/103 (53%), Positives = 66/103 (64%)
Query: 222 ELFKFLEKYRPESWEAKKQRLXXXXXXXXXXXXDTPTKKPNQIKQGTNTVTRLVVKKKAS 281
+L FL+ Y+PES KKQRL T KKP +K G N +T+LV KKA+
Sbjct: 108 DLLNFLKAYKPESKTDKKQRLLNKAKEALNKNI-TKDKKPLFLKYGINHITKLVENKKAN 166
Query: 282 LVIIAHDVDPIELVLFLPALCRKMGIPYCIVDSSDKANLAKLI 324
LV+IA+DV PIELVLFLPALCR +PYCIV DKA L KL+
Sbjct: 167 LVVIANDVSPIELVLFLPALCRLKEVPYCIV--KDKATLGKLV 207
Score = 196 (74.1 bits), Expect = 5.8e-40, Sum P(2) = 5.8e-40
Identities = 35/65 (53%), Positives = 50/65 (76%)
Query: 38 LFEKKARNFGIGQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLKVPPPVHQFTQAVDKQ 97
+FEKK R+ IG ++PK+DLS++VKWP+YIRIQR+K +L +RLKVPP ++QF + K
Sbjct: 45 IFEKKKRSNIIGVGVRPKKDLSKYVKWPRYIRIQRKKKILLQRLKVPPSINQFNHTLPKS 104
Query: 98 TGQDI 102
QD+
Sbjct: 105 QTQDL 109
Score = 72 (30.4 bits), Expect = 3.4e-34, Sum P(2) = 3.4e-34
Identities = 17/51 (33%), Positives = 25/51 (49%)
Query: 303 RKMGIPYCI--VDSSDKANLAKLIESVKVNFTDRYDEIRRQWGGGSLGSKS 351
+K C+ V D+ L + K NF D D +RR+WGG + +KS
Sbjct: 209 KKTATAVCLESVKKEDQEKLDYFAKVCKENFNDNVD-LRRKWGGQKMSAKS 258
>UNIPROTKB|Q8ILL2 [details] [associations]
symbol:PF14_0231 "60S ribosomal protein L7-3, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0022625 "cytosolic
large ribosomal subunit" evidence=ISS] InterPro:IPR004038
InterPro:IPR001921 Pfam:PF01248 EMBL:AE014187 GO:GO:0022625
InterPro:IPR018492 PRINTS:PR00881 HOGENOM:HOG000216644 KO:K02936
PANTHER:PTHR23105:SF1 PRINTS:PR00882 RefSeq:XP_001348405.2
ProteinModelPortal:Q8ILL2 IntAct:Q8ILL2 MINT:MINT-1566866
PRIDE:Q8ILL2 EnsemblProtists:PF14_0231:mRNA GeneID:811813
KEGG:pfa:PF14_0231 EuPathDB:PlasmoDB:PF3D7_1424400
ProtClustDB:CLSZ2444896 Uniprot:Q8ILL2
Length = 283
Score = 315 (115.9 bits), Expect = 3.4e-34, Sum P(2) = 3.4e-34
Identities = 64/129 (49%), Positives = 84/129 (65%)
Query: 99 GQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLKVPPPVHQFTQAVDKQTASQLFKFLEK 158
G ++PK+DLS++VKWP+YIRIQR+K +L +RLKVPP ++QF + K L FL+
Sbjct: 56 GVGVRPKKDLSKYVKWPRYIRIQRKKKILLQRLKVPPSINQFNHTLPKSQTQDLLNFLKA 115
Query: 159 YRPESWEAKKQRLXXXXXXXXXXXXDTPTKKPNQIKQGTNTVTRLVVKKKASLVIIAHDV 218
Y+PES KKQRL T KKP +K G N +T+LV KKA+LV+IA+DV
Sbjct: 116 YKPESKTDKKQRLLNKAKEALNKNI-TKDKKPLFLKYGINHITKLVENKKANLVVIANDV 174
Query: 219 DPIELFKFL 227
PIEL FL
Sbjct: 175 SPIELVLFL 183
Score = 246 (91.7 bits), Expect = 5.8e-40, Sum P(2) = 5.8e-40
Identities = 55/103 (53%), Positives = 66/103 (64%)
Query: 222 ELFKFLEKYRPESWEAKKQRLXXXXXXXXXXXXDTPTKKPNQIKQGTNTVTRLVVKKKAS 281
+L FL+ Y+PES KKQRL T KKP +K G N +T+LV KKA+
Sbjct: 108 DLLNFLKAYKPESKTDKKQRLLNKAKEALNKNI-TKDKKPLFLKYGINHITKLVENKKAN 166
Query: 282 LVIIAHDVDPIELVLFLPALCRKMGIPYCIVDSSDKANLAKLI 324
LV+IA+DV PIELVLFLPALCR +PYCIV DKA L KL+
Sbjct: 167 LVVIANDVSPIELVLFLPALCRLKEVPYCIV--KDKATLGKLV 207
Score = 196 (74.1 bits), Expect = 5.8e-40, Sum P(2) = 5.8e-40
Identities = 35/65 (53%), Positives = 50/65 (76%)
Query: 38 LFEKKARNFGIGQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLKVPPPVHQFTQAVDKQ 97
+FEKK R+ IG ++PK+DLS++VKWP+YIRIQR+K +L +RLKVPP ++QF + K
Sbjct: 45 IFEKKKRSNIIGVGVRPKKDLSKYVKWPRYIRIQRKKKILLQRLKVPPSINQFNHTLPKS 104
Query: 98 TGQDI 102
QD+
Sbjct: 105 QTQDL 109
Score = 72 (30.4 bits), Expect = 3.4e-34, Sum P(2) = 3.4e-34
Identities = 17/51 (33%), Positives = 25/51 (49%)
Query: 303 RKMGIPYCI--VDSSDKANLAKLIESVKVNFTDRYDEIRRQWGGGSLGSKS 351
+K C+ V D+ L + K NF D D +RR+WGG + +KS
Sbjct: 209 KKTATAVCLESVKKEDQEKLDYFAKVCKENFNDNVD-LRRKWGGQKMSAKS 258
>UNIPROTKB|F1LU72 [details] [associations]
symbol:F1LU72 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR004037 PROSITE:PS01082 InterPro:IPR004038
InterPro:IPR001921 Pfam:PF01248 GO:GO:0042254 GO:GO:0030529
InterPro:IPR018492 PRINTS:PR00881 PANTHER:PTHR23105:SF1
PRINTS:PR00882 GeneTree:ENSGT00390000004753 IPI:IPI00557480
Ensembl:ENSRNOT00000017542 Uniprot:F1LU72
Length = 250
Score = 313 (115.2 bits), Expect = 5.8e-40, Sum P(2) = 5.8e-40
Identities = 73/159 (45%), Positives = 102/159 (64%)
Query: 69 RIQRQKAVLQKRLKVPPPV--HQFTQAVDKQTG--QDIQPKRDLSRFVKWPKYIRIQRQK 124
R +++ ++++ P V +Q + V K G QDIQPKRDL+RFVKW +YIR+QRQ+
Sbjct: 4 RCPKEQTPSREKVAPAPAVVKNQEAKTVPKNFGIVQDIQPKRDLTRFVKW-RYIRLQRQR 62
Query: 125 AVLQKRLKVPPPVHQFTQAVDKQTASQLFKFLEKYRPESWEAKKQRLXXXXXXXXXXXXD 184
A+L KRLKVPP ++QFTQA+D+QTA+Q K +YRPE+ A ++ D
Sbjct: 63 AILYKRLKVPPVINQFTQALDRQTATQKLKLAHEYRPET--AGEE-------AKAAGHGD 113
Query: 185 TPTKKPNQIKQGTNTVTRLVVKKKASLVIIAHDVDPIEL 223
P K P ++ +TVT LV KK +++IAHDVDPIEL
Sbjct: 114 VPNKTPPVLRAEVSTVTTLVEIKKV-IMVIAHDVDPIEL 151
Score = 221 (82.9 bits), Expect = 1.7e-36, Sum P(2) = 1.7e-36
Identities = 41/55 (74%), Positives = 51/55 (92%)
Query: 44 RNFGIGQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLKVPPPVHQFTQAVDKQT 98
+NFGI QDIQPKRDL+RFVKW +YIR+QRQ+A+L KRLKVPP ++QFTQA+D+QT
Sbjct: 33 KNFGIVQDIQPKRDLTRFVKW-RYIRLQRQRAILYKRLKVPPVINQFTQALDRQT 86
Score = 188 (71.2 bits), Expect = 1.7e-36, Sum P(2) = 1.7e-36
Identities = 38/70 (54%), Positives = 50/70 (71%)
Query: 255 DTPTKKPNQIKQGTNTVTRLVVKKKASLVIIAHDVDPIELVLFLPALCRKMGIPYCIVDS 314
D P K P ++ +TVT LV KK +++IAHDVDPIELV+ LPALC+KMG+PYCI+
Sbjct: 113 DVPNKTPPVLRAEVSTVTTLVEIKKV-IMVIAHDVDPIELVVSLPALCQKMGVPYCIIKG 171
Query: 315 SDKANLAKLI 324
KA L +L+
Sbjct: 172 --KARLGRLV 179
Score = 129 (50.5 bits), Expect = 5.8e-40, Sum P(2) = 5.8e-40
Identities = 23/45 (51%), Positives = 31/45 (68%)
Query: 307 IPYCIVDSSDKANLAKLIESVKVNFTDRYDEIRRQWGGGSLGSKS 351
+ + V+S DK LAKL+ +++ N+ DRYDEIRR WGG LG S
Sbjct: 186 VAFTQVNSEDKGALAKLVGAIRTNYNDRYDEIRRHWGGNVLGPNS 230
>UNIPROTKB|G4MSW3 [details] [associations]
symbol:MGG_04612 "60S ribosomal protein L8-B"
species:242507 "Magnaporthe oryzae 70-15" [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR004037 PROSITE:PS01082
InterPro:IPR004038 InterPro:IPR001921 Pfam:PF01248 GO:GO:0042254
GO:GO:0005840 GO:GO:0043581 EMBL:CM001232 InterPro:IPR018492
PRINTS:PR00881 KO:K02936 PANTHER:PTHR23105:SF1 PRINTS:PR00882
RefSeq:XP_003713624.1 ProteinModelPortal:G4MSW3 SMR:G4MSW3
EnsemblFungi:MGG_04612T0 GeneID:2677998 KEGG:mgr:MGG_04612
Uniprot:G4MSW3
Length = 261
Score = 340 (124.7 bits), Expect = 4.0e-39, Sum P(2) = 4.0e-39
Identities = 69/130 (53%), Positives = 86/130 (66%)
Query: 99 GQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLKVPPPVHQFTQAVDKQTASQLFKFLEK 158
GQDIQP+R+LSR VKWP+Y+R+QRQK +L RLKVPP + QF +DK TA+Q FK L K
Sbjct: 39 GQDIQPRRNLSRMVKWPEYVRLQRQKKILSMRLKVPPALAQFQHVLDKNTAAQAFKLLNK 98
Query: 159 YRPESWEAKKQRLXXXXXXXXXXXX-DTPTKKPNQIKQGTNTVTRLVVKKKASLVIIAHD 217
YRPE+ KK+RL + +KKP K G N V L+ KKASLV+I +D
Sbjct: 99 YRPETKAEKKERLLKEATAVKEGKKKEDVSKKPYTAKYGLNHVVGLIENKKASLVLIPND 158
Query: 218 VDPIELFKFL 227
VDP+EL FL
Sbjct: 159 VDPVELVVFL 168
Score = 237 (88.5 bits), Expect = 2.5e-28, Sum P(2) = 2.5e-28
Identities = 57/142 (40%), Positives = 78/142 (54%)
Query: 188 KKPNQIK-QGTNTVTRLVVKKKASLVIIAHDVDP---IELFKFLEKYRPESWEAKKQRLX 243
K P ++ Q + + +K +L H +D + FK L KYRPE+ KK+RL
Sbjct: 53 KWPEYVRLQRQKKILSMRLKVPPALAQFQHVLDKNTAAQAFKLLNKYRPETKAEKKERLL 112
Query: 244 XXXXXXXXXXX-DTPTKKPNQIKQGTNTVTRLVVKKKASLVIIAHDVDPIELVLFLPALC 302
+ +KKP K G N V L+ KKASLV+I +DVDP+ELV+FLPALC
Sbjct: 113 KEATAVKEGKKKEDVSKKPYTAKYGLNHVVGLIENKKASLVLIPNDVDPVELVVFLPALC 172
Query: 303 RKMGIPYCIVDSSDKANLAKLI 324
RKMG+PY I+ KA L ++
Sbjct: 173 RKMGVPYAIIKG--KARLGTVV 192
Score = 225 (84.3 bits), Expect = 4.5e-27, Sum P(2) = 4.5e-27
Identities = 40/61 (65%), Positives = 50/61 (81%)
Query: 38 LFEKKARNFGIGQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLKVPPPVHQFTQAVDKQ 97
L EK++RNFGIGQDIQP+R+LSR VKWP+Y+R+QRQK +L RLKVPP + QF +DK
Sbjct: 28 LLEKRSRNFGIGQDIQPRRNLSRMVKWPEYVRLQRQKKILSMRLKVPPALAQFQHVLDKN 87
Query: 98 T 98
T
Sbjct: 88 T 88
Score = 94 (38.1 bits), Expect = 4.0e-39, Sum P(2) = 4.0e-39
Identities = 17/40 (42%), Positives = 26/40 (65%)
Query: 312 VDSSDKANLAKLIESVKVNFTDRYDEIRRQWGGGSLGSKS 351
V S DK L+KLI ++K + ++ + RR WGGG +G K+
Sbjct: 205 VRSEDKTELSKLISAIKDGYLEKSESARRTWGGGIMGYKA 244
>DICTYBASE|DDB_G0277629 [details] [associations]
symbol:rpl7a "60S ribosomal protein L7a"
species:44689 "Dictyostelium discoideum" [GO:0005615 "extracellular
space" evidence=IDA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR004037 PROSITE:PS01082
dictyBase:DDB_G0277629 InterPro:IPR004038 InterPro:IPR001921
Pfam:PF01248 GO:GO:0005615 GenomeReviews:CM000151_GR GO:GO:0042254
GO:GO:0005840 EMBL:AAFI02000020 eggNOG:COG1358 InterPro:IPR018492
PRINTS:PR00881 KO:K02936 PANTHER:PTHR23105:SF1 PRINTS:PR00882
RefSeq:XP_642566.1 HSSP:O29494 ProteinModelPortal:Q54ZD1 SMR:Q54ZD1
STRING:Q54ZD1 PRIDE:Q54ZD1 EnsemblProtists:DDB0231339
GeneID:8621128 KEGG:ddi:DDB_G0277629 OMA:RNASCVA Uniprot:Q54ZD1
Length = 285
Score = 337 (123.7 bits), Expect = 2.2e-36, Sum P(2) = 2.2e-36
Identities = 69/134 (51%), Positives = 89/134 (66%)
Query: 98 TGQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLKVPPPVHQFTQAVDKQTASQLFKFLE 157
TG +QPKRDL+ F WP+YI++QRQ+ VL KRLKVPP ++QFT+ DK TA LFK L+
Sbjct: 56 TGFGVQPKRDLTHFTHWPRYIKLQRQRRVLLKRLKVPPTINQFTRVFDKNTAVHLFKLLD 115
Query: 158 KYRPESWEAKKQRLXXXXXXXXXXXXD--TP-TKKPNQ-IKQGTNTVTRLVVKKKASLVI 213
KYRPE KK RL P +KP Q ++ G ++VT+L+ KKKA LV+
Sbjct: 116 KYRPEEASVKKARLLKIAEARAATPKGQAAPKAEKPVQHLRFGIDSVTKLIEKKKAKLVV 175
Query: 214 IAHDVDPIELFKFL 227
IAHDVDP+EL +L
Sbjct: 176 IAHDVDPVELVLYL 189
Score = 247 (92.0 bits), Expect = 4.9e-21, P = 4.9e-21
Identities = 53/108 (49%), Positives = 70/108 (64%)
Query: 221 IELFKFLEKYRPESWEAKKQRLXXXXXXXXXXXXD--TP-TKKPNQ-IKQGTNTVTRLVV 276
+ LFK L+KYRPE KK RL P +KP Q ++ G ++VT+L+
Sbjct: 108 VHLFKLLDKYRPEEASVKKARLLKIAEARAATPKGQAAPKAEKPVQHLRFGIDSVTKLIE 167
Query: 277 KKKASLVIIAHDVDPIELVLFLPALCRKMGIPYCIVDSSDKANLAKLI 324
KKKA LV+IAHDVDP+ELVL+LP LCR+M +PYCIV S K+ L +L+
Sbjct: 168 KKKAKLVVIAHDVDPVELVLYLPTLCRRMDVPYCIVKS--KSRLGELV 213
Score = 211 (79.3 bits), Expect = 3.4e-23, Sum P(2) = 3.4e-23
Identities = 47/118 (39%), Positives = 64/118 (54%)
Query: 38 LFEKKARNFGIGQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLKVPPPVHQFTQAVDKQ 97
L+ K +NFG G +QPKRDL+ F WP+YI++QRQ+ VL KRLKVPP ++QFT+ DK
Sbjct: 46 LYTKNVKNFGTGFGVQPKRDLTHFTHWPRYIKLQRQRRVLLKRLKVPPTINQFTRVFDKN 105
Query: 98 TGQDIQPKRDLSR----FVKWPKYIRIQRQKAVLQKRLKVPP---PVHQFTQAVDKQT 148
T + D R VK + ++I +A K P PV +D T
Sbjct: 106 TAVHLFKLLDKYRPEEASVKKARLLKIAEARAATPKGQAAPKAEKPVQHLRFGIDSVT 163
Score = 71 (30.1 bits), Expect = 2.2e-36, Sum P(2) = 2.2e-36
Identities = 16/36 (44%), Positives = 22/36 (61%)
Query: 312 VDSSDKANLAKLIESVKVNFTDRYDEIRRQWGGGSL 347
V+S+D LA L+ES K F + E R+ WGG +L
Sbjct: 226 VNSADSNELALLVESAKQMFNNN-SEHRKTWGGNTL 260
>UNIPROTKB|D4A479 [details] [associations]
symbol:D4A479 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR004037 PROSITE:PS01082 InterPro:IPR004038
InterPro:IPR001921 Pfam:PF01248 GO:GO:0042254 GO:GO:0030529
InterPro:IPR018492 PRINTS:PR00881 PANTHER:PTHR23105:SF1
PRINTS:PR00882 GeneTree:ENSGT00390000004753 OrthoDB:EOG4B8JDV
IPI:IPI00562053 Ensembl:ENSRNOT00000045509 Uniprot:D4A479
Length = 263
Score = 266 (98.7 bits), Expect = 2.6e-32, Sum P(2) = 2.6e-32
Identities = 65/150 (43%), Positives = 88/150 (58%)
Query: 78 QKRLKVPPPVHQFTQAVDK-QTGQDIQPKRDLSRFVKWPKY---IRIQRQKAVLQKRLKV 133
Q+ KV P+ F + ++ GQD QPK L+ VKWP Y R+Q+Q A+L R K
Sbjct: 20 QEAKKVVNPL--FEKRLENFSIGQDTQPKTYLTLIVKWPGYRAHYRLQQQMAILS-RSKY 76
Query: 134 PPPVHQFTQAVDKQTASQLFKFLEKYRPESWEAKKQRLXXXXXXXXXXXXDTPTKKPNQI 193
+ +F QA+ +QTA+QL K +KYRPE+ + KKQRL D PT++P +
Sbjct: 77 LLLLTKFPQALHRQTATQLLKHAQKYRPETKQEKKQRLLARAEKKAAGKGDIPTERP-PV 135
Query: 194 KQGTNTVTRLVVKKKASLVIIAHDVDPIEL 223
G NTV LV KKA +V+IAH+VDP EL
Sbjct: 136 LAGVNTVITLVENKKAQMVVIAHNVDPTEL 165
Score = 245 (91.3 bits), Expect = 4.9e-33, Sum P(2) = 4.9e-33
Identities = 54/119 (45%), Positives = 71/119 (59%)
Query: 216 HDVDPIELFKFLEKYRPESWEAKKQRLXXXXXXXXXXXXDTPTKKPNQIKQGTNTVTRLV 275
H +L K +KYRPE+ + KKQRL D PT++P + G NTV LV
Sbjct: 88 HRQTATQLLKHAQKYRPETKQEKKQRLLARAEKKAAGKGDIPTERP-PVLAGVNTVITLV 146
Query: 276 VKKKASLVIIAHDVDPIELVLFLPALCRKMGIPYCIVDSSDKANLAKLI--ESVKVNFT 332
KKA +V+IAH+VDP ELV+ LPAL RKMG+PYC + KA L +L+ ++ V FT
Sbjct: 147 ENKKAQMVVIAHNVDPTELVVSLPALSRKMGVPYCFIKG--KARLGRLVHRKTSTVAFT 203
Score = 131 (51.2 bits), Expect = 4.9e-33, Sum P(2) = 4.9e-33
Identities = 31/68 (45%), Positives = 41/68 (60%)
Query: 38 LFEKKARNFGIGQDIQPKRDLSRFVKWPKY---IRIQRQKAVLQKRLKVPPPVHQFTQAV 94
LFEK+ NF IGQD QPK L+ VKWP Y R+Q+Q A+L R K + +F QA+
Sbjct: 29 LFEKRLENFSIGQDTQPKTYLTLIVKWPGYRAHYRLQQQMAILS-RSKYLLLLTKFPQAL 87
Query: 95 DKQTGQDI 102
+QT +
Sbjct: 88 HRQTATQL 95
Score = 103 (41.3 bits), Expect = 2.6e-32, Sum P(2) = 2.6e-32
Identities = 21/39 (53%), Positives = 27/39 (69%)
Query: 313 DSSDKANLAKLIESVKVNFTDRYDEIRRQWGGGSLGSKS 351
+S DK LAKL+E+ + ++ DRYDEI WGG LG KS
Sbjct: 206 NSEDKVALAKLVEAFRTSY-DRYDEICHHWGGTVLGPKS 243
>WB|WBGene00022219 [details] [associations]
symbol:Y73B3A.18 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP]
InterPro:IPR001921 GO:GO:0009792 GO:GO:0040035 KO:K02936
PRINTS:PR00882 GeneTree:ENSGT00390000004753 EMBL:FO081721
GeneID:190636 KEGG:cel:CELE_Y73B3A.18 UCSC:Y73B3A.18b CTD:190636
NextBio:946460 RefSeq:NP_741699.1 ProteinModelPortal:Q95XE4
SMR:Q95XE4 STRING:Q95XE4 PRIDE:Q95XE4 EnsemblMetazoa:Y73B3A.18a
WormBase:Y73B3A.18a InParanoid:Q95XE4 ArrayExpress:Q95XE4
Uniprot:Q95XE4
Length = 234
Score = 297 (109.6 bits), Expect = 2.5e-26, P = 2.5e-26
Identities = 62/107 (57%), Positives = 79/107 (73%)
Query: 65 PKYIRIQRQKAVLQKRLKVPPPVHQFTQAVDKQTGQDIQPKRDLSRFVKWPKYIRIQRQK 124
P +IR Q Q +QK +K P+ + +A + GQDIQPK+D++RFVKWPKYIR+QRQ
Sbjct: 118 PAHIRAQTQ---VQKEVK--NPLFE-KRARNFNIGQDIQPKKDVTRFVKWPKYIRLQRQS 171
Query: 125 AVLQKRLKVPPPVHQFTQAVDKQTASQLFKFLEKYRPESWEAKKQRL 171
A+LQKRLKVPP ++QF A+D +A Q FK L+KYRPES EAKK RL
Sbjct: 172 AILQKRLKVPPTINQFRTALDSHSARQAFKLLDKYRPESSEAKKNRL 218
Score = 249 (92.7 bits), Expect = 1.1e-27, Sum P(2) = 1.1e-27
Identities = 44/63 (69%), Positives = 55/63 (87%)
Query: 38 LFEKKARNFGIGQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLKVPPPVHQFTQAVDKQ 97
LFEK+ARNF IGQDIQPK+D++RFVKWPKYIR+QRQ A+LQKRLKVPP ++QF A+D
Sbjct: 135 LFEKRARNFNIGQDIQPKKDVTRFVKWPKYIRLQRQSAILQKRLKVPPTINQFRTALDSH 194
Query: 98 TGQ 100
+ +
Sbjct: 195 SAR 197
Score = 76 (31.8 bits), Expect = 1.1e-27, Sum P(2) = 1.1e-27
Identities = 15/21 (71%), Positives = 17/21 (80%)
Query: 222 ELFKFLEKYRPESWEAKKQRL 242
+ FK L+KYRPES EAKK RL
Sbjct: 198 QAFKLLDKYRPESSEAKKNRL 218
>UNIPROTKB|Q29375 [details] [associations]
symbol:RPL7A "60S ribosomal protein L7a" species:9823 "Sus
scrofa" [GO:0005840 "ribosome" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] InterPro:IPR004037 PROSITE:PS01082
InterPro:IPR004038 InterPro:IPR001921 Pfam:PF01248 GO:GO:0042254
GO:GO:0005840 InterPro:IPR018492 PRINTS:PR00881
PANTHER:PTHR23105:SF1 PRINTS:PR00882 HOVERGEN:HBG002936 EMBL:F14581
PRIDE:Q29375 Uniprot:Q29375
Length = 132
Score = 295 (108.9 bits), Expect = 4.0e-26, P = 4.0e-26
Identities = 58/103 (56%), Positives = 70/103 (67%)
Query: 222 ELFKFLEKYRPESWEAKKQRLXXXXXXXXXXXXDTPTKKPNQIKQGTNTVTRLVVKKKAS 281
+L K KYRPE+ + KKQRL D PTK+P ++ G NTVT LV KKA
Sbjct: 5 QLLKVAHKYRPETKQEKKQRLLARAEKKAAXKGDVPTKRPPVLRAGVNTVTTLVENKKAQ 64
Query: 282 LVIIAHDVDPIELVLFLPALCRKMGIPYCIVDSSDKANLAKLI 324
LV+IAHDVDPIELV+FLPALCRKMG+PYCI+ KA L +L+
Sbjct: 65 LVVIAHDVDPIELVVFLPALCRKMGVPYCIIKG--KARLGRLV 105
Score = 217 (81.4 bits), Expect = 4.1e-21, Sum P(2) = 4.1e-21
Identities = 45/81 (55%), Positives = 52/81 (64%)
Query: 147 QTASQLFKFLEKYRPESWEAKKQRLXXXXXXXXXXXXDTPTKKPNQIKQGTNTVTRLVVK 206
QTA+QL K KYRPE+ + KKQRL D PTK+P ++ G NTVT LV
Sbjct: 1 QTATQLLKVAHKYRPETKQEKKQRLLARAEKKAAXKGDVPTKRPPVLRAGVNTVTTLVEN 60
Query: 207 KKASLVIIAHDVDPIELFKFL 227
KKA LV+IAHDVDPIEL FL
Sbjct: 61 KKAQLVVIAHDVDPIELVVFL 81
Score = 45 (20.9 bits), Expect = 4.1e-21, Sum P(2) = 4.1e-21
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 307 IPYCIVDSSDKANLAKLIES 326
+ + V+S DK LAKL+E+
Sbjct: 113 VAFTQVNSEDKGALAKLVEA 132
>UNIPROTKB|Q5T8U2 [details] [associations]
symbol:RPL7A "60S ribosomal protein L7a" species:9606 "Homo
sapiens" [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] InterPro:IPR004037
PROSITE:PS01082 InterPro:IPR004038 InterPro:IPR001921 Pfam:PF01248
GO:GO:0042254 GO:GO:0005840 EMBL:AL158826 InterPro:IPR018492
PRINTS:PR00881 HOGENOM:HOG000216644 PRINTS:PR00882 ChiTaRS:RPL7A
UniGene:Hs.499839 HGNC:HGNC:10364 IPI:IPI00642454 SMR:Q5T8U2
STRING:Q5T8U2 Ensembl:ENST00000315731 HOVERGEN:HBG058488
Uniprot:Q5T8U2
Length = 151
Score = 242 (90.2 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 46/70 (65%), Positives = 55/70 (78%)
Query: 255 DTPTKKPNQIKQGTNTVTRLVVKKKASLVIIAHDVDPIELVLFLPALCRKMGIPYCIVDS 314
D PTK+P ++ G NTVT LV KKA LV+IAHDVDPIELV+FLPALCRKMG+PYCI+
Sbjct: 12 DVPTKRPPVLRAGVNTVTTLVENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKG 71
Query: 315 SDKANLAKLI 324
KA L +L+
Sbjct: 72 --KARLGRLV 79
Score = 146 (56.5 bits), Expect = 8.1e-23, Sum P(2) = 8.1e-23
Identities = 29/44 (65%), Positives = 33/44 (75%)
Query: 184 DTPTKKPNQIKQGTNTVTRLVVKKKASLVIIAHDVDPIELFKFL 227
D PTK+P ++ G NTVT LV KKA LV+IAHDVDPIEL FL
Sbjct: 12 DVPTKRPPVLRAGVNTVTTLVENKKAQLVVIAHDVDPIELVVFL 55
Score = 141 (54.7 bits), Expect = 8.1e-23, Sum P(2) = 8.1e-23
Identities = 25/45 (55%), Positives = 33/45 (73%)
Query: 307 IPYCIVDSSDKANLAKLIESVKVNFTDRYDEIRRQWGGGSLGSKS 351
+ + V+S DK LAKL+E+++ N+ DRYDEIRR WGG LG KS
Sbjct: 87 VAFTQVNSEDKGALAKLVEAIRTNYNDRYDEIRRHWGGNVLGPKS 131
>RGD|1359295 [details] [associations]
symbol:Rsl1d1 "ribosomal L1 domain containing 1" species:10116
"Rattus norvegicus" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0015934 "large
ribosomal subunit" evidence=IEA] InterPro:IPR002143
InterPro:IPR016094 InterPro:IPR023674 Pfam:PF00687
InterPro:IPR001921 RGD:1359295 GO:GO:0005730 GO:GO:0006412
GO:GO:0032880 GO:GO:0003723 GO:GO:0003735 GO:GO:0015934
SUPFAM:SSF56808 eggNOG:COG1358 Gene3D:3.30.190.20
GeneTree:ENSGT00440000038603 OrthoDB:EOG4V9TQR CTD:26156 KO:K14775
PRINTS:PR00882 EMBL:AY310144 IPI:IPI00368458 RefSeq:NP_001008876.1
UniGene:Rn.154542 Ensembl:ENSRNOT00000044593 GeneID:302898
KEGG:rno:302898 UCSC:RGD:1359295 InParanoid:Q7TQ86 NextBio:650292
Genevestigator:Q7TQ86 Uniprot:Q7TQ86
Length = 540
Score = 165 (63.1 bits), Expect = 5.3e-22, Sum P(3) = 5.3e-22
Identities = 31/44 (70%), Positives = 37/44 (84%)
Query: 39 FEKKARNFGIGQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLK 82
FEK+ +NFGI QDIQPKRDL+RFVKW YIR+QRQ+A+L K K
Sbjct: 352 FEKRPKNFGIEQDIQPKRDLTRFVKWSCYIRLQRQRAILYKGSK 395
Score = 151 (58.2 bits), Expect = 2.2e-17, Sum P(2) = 2.2e-17
Identities = 42/122 (34%), Positives = 61/122 (50%)
Query: 100 QDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLKV-------PPPVHQFTQAVDKQTASQL 152
QDIQPKRDL+RFVKW YIR+QRQ+A+L K K P P + + +
Sbjct: 363 QDIQPKRDLTRFVKWSCYIRLQRQRAILYKGSKYLLSSTSSPRPWTGRQRLSCLSLPTSI 422
Query: 153 FKFLEKYRPES-WEAKKQRLXXXXXXXXXXXXDTPTKKPNQIKQGTNTVTRLVVKKKASL 211
+ + R + W +++L + TK+P ++ G NTVT V +KA L
Sbjct: 423 GQRQSRRRSKGCWPVLRRKLLAKGTSQLRDHLSS-TKRPPVLQAGVNTVTTSVENQKAQL 481
Query: 212 VI 213
V+
Sbjct: 482 VV 483
Score = 131 (51.2 bits), Expect = 5.3e-22, Sum P(3) = 5.3e-22
Identities = 23/36 (63%), Positives = 28/36 (77%)
Query: 316 DKANLAKLIESVKVNFTDRYDEIRRQWGGGSLGSKS 351
DK LAKL+E+++ N+ DRYDEIRR WGG LG KS
Sbjct: 485 DKGALAKLVEAIRTNYNDRYDEIRRHWGGNVLGPKS 520
Score = 63 (27.2 bits), Expect = 5.3e-22, Sum P(3) = 5.3e-22
Identities = 13/27 (48%), Positives = 18/27 (66%)
Query: 258 TKKPNQIKQGTNTVTRLVVKKKASLVI 284
TK+P ++ G NTVT V +KA LV+
Sbjct: 457 TKRPPVLQAGVNTVTTSVENQKAQLVV 483
>UNIPROTKB|F1LT34 [details] [associations]
symbol:F1LT34 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR004037 PROSITE:PS01082 InterPro:IPR004038
InterPro:IPR001921 Pfam:PF01248 GO:GO:0042254 GO:GO:0030529
InterPro:IPR018492 PRINTS:PR00881 PRINTS:PR00882 IPI:IPI00389040
PRIDE:F1LT34 Ensembl:ENSRNOT00000041848 Uniprot:F1LT34
Length = 142
Score = 214 (80.4 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 44/87 (50%), Positives = 59/87 (67%)
Query: 255 DTPTKKPNQIKQGTNTVTRLVVKKKASLVIIAHDVDPIELVLFLPALCRKMGIPYCIVDS 314
D TK+P ++ G NTVT LV KKA LV+IA+DVDPIELV+FL ALC+KMG+PYCI+
Sbjct: 3 DFSTKRPPVLRAGVNTVTTLVENKKAQLVVIAYDVDPIELVVFLLALCQKMGVPYCIIKG 62
Query: 315 SDKANLAKLIESVKVNFTDRYDEIRRQ 341
KA L +L+ K T + ++ +
Sbjct: 63 --KARLGRLVHR-KTRTTVAFTQVNSE 86
Score = 130 (50.8 bits), Expect = 8.7e-19, Sum P(2) = 8.7e-19
Identities = 27/44 (61%), Positives = 32/44 (72%)
Query: 184 DTPTKKPNQIKQGTNTVTRLVVKKKASLVIIAHDVDPIELFKFL 227
D TK+P ++ G NTVT LV KKA LV+IA+DVDPIEL FL
Sbjct: 3 DFSTKRPPVLRAGVNTVTTLVENKKAQLVVIAYDVDPIELVVFL 46
Score = 120 (47.3 bits), Expect = 8.7e-19, Sum P(2) = 8.7e-19
Identities = 23/45 (51%), Positives = 31/45 (68%)
Query: 307 IPYCIVDSSDKANLAKLIESVKVNFTDRYDEIRRQWGGGSLGSKS 351
+ + V+S DK LAKL+E+V+ N+ DR +EIR WGG LG KS
Sbjct: 78 VAFTQVNSEDKGVLAKLVEAVRANYNDRCEEIRCHWGGNVLGPKS 122
>UNIPROTKB|F1M289 [details] [associations]
symbol:F1M289 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR004037 PROSITE:PS01082 InterPro:IPR004038
InterPro:IPR001921 Pfam:PF01248 GO:GO:0042254 GO:GO:0030529
InterPro:IPR018492 PRINTS:PR00881 PRINTS:PR00882 IPI:IPI00560876
Ensembl:ENSRNOT00000041959 Uniprot:F1M289
Length = 141
Score = 218 (81.8 bits), Expect = 5.8e-18, P = 5.8e-18
Identities = 42/70 (60%), Positives = 54/70 (77%)
Query: 255 DTPTKKPNQIKQGTNTVTRLVVKKKASLVIIAHDVDPIELVLFLPALCRKMGIPYCIVDS 314
D+ +P+++ +G TVT LV KKA LV+IAHDVDPIELV+FLPALCRKMG+PYCI+
Sbjct: 2 DSSLLQPSKMPKGIKTVTTLVENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKG 61
Query: 315 SDKANLAKLI 324
KA L +L+
Sbjct: 62 --KARLGRLV 69
Score = 125 (49.1 bits), Expect = 2.0e-18, Sum P(2) = 2.0e-18
Identities = 23/45 (51%), Positives = 30/45 (66%)
Query: 307 IPYCIVDSSDKANLAKLIESVKVNFTDRYDEIRRQWGGGSLGSKS 351
+ + V+S DK L KL+E+V+ N+ DRYDEI WGG LG KS
Sbjct: 77 VAFTQVNSEDKGALTKLVEAVRTNYNDRYDEICHHWGGNVLGPKS 121
Score = 122 (48.0 bits), Expect = 2.0e-18, Sum P(2) = 2.0e-18
Identities = 25/44 (56%), Positives = 32/44 (72%)
Query: 184 DTPTKKPNQIKQGTNTVTRLVVKKKASLVIIAHDVDPIELFKFL 227
D+ +P+++ +G TVT LV KKA LV+IAHDVDPIEL FL
Sbjct: 2 DSSLLQPSKMPKGIKTVTTLVENKKAQLVVIAHDVDPIELVVFL 45
>UNIPROTKB|F1M843 [details] [associations]
symbol:F1M843 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR004037 PROSITE:PS01082 InterPro:IPR004038
InterPro:IPR001921 Pfam:PF01248 GO:GO:0042254 GO:GO:0030529
InterPro:IPR018492 PRINTS:PR00881 PANTHER:PTHR23105:SF1
IPI:IPI00392230 Ensembl:ENSRNOT00000036927 Uniprot:F1M843
Length = 243
Score = 205 (77.2 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 54/123 (43%), Positives = 67/123 (54%)
Query: 221 IELFKFLEKYRPESWEAKKQRLXXXXXXXXXXXXDTPTKKPNQIKQGTNTVTRLVVKKKA 280
++L K K RPE+ + +KQRL TP P G NT T LV KKA
Sbjct: 84 LQLLKLAHKCRPET-KQEKQRLLAWLRRKLQR---TPV--P---LAGVNTATTLVENKKA 134
Query: 281 SLVIIAHDVDPIELVLFLPALCRKMGIPYCIVDSSDKANLAKLIESVKVNFTDRYDEIRR 340
L +IAHDVDPIE V+FLPALCRKMG+PYCI+ KA L L+ K T + ++
Sbjct: 135 QLEVIAHDVDPIEPVVFLPALCRKMGVPYCIIKG--KARLGHLVHR-KTCTTVAFTQVNE 191
Query: 341 QWG 343
G
Sbjct: 192 DKG 194
Score = 174 (66.3 bits), Expect = 3.0e-18, Sum P(2) = 3.0e-18
Identities = 57/129 (44%), Positives = 67/129 (51%)
Query: 109 SRFVKWPKYIRI-------QRQKAVLQKRLKVPPPVHQFTQAVDKQTAS---QLFKFLEK 158
S F K PK RI Q Q+A+ K LK P + QF QA+D+QTA+ QL K K
Sbjct: 33 SLFEKRPKNFRIGQDTQPLQWQRAIFCKWLKGPLAIDQFPQALDRQTATPYLQLLKLAHK 92
Query: 159 YRPESWEAKKQRLXXXXXXXXXXXXDTPTKKPNQIKQGTNTVTRLVVKKKASLVIIAHDV 218
RPE+ + +KQRL TP P G NT T LV KKA L +IAHDV
Sbjct: 93 CRPET-KQEKQRLLAWLRRKLQR---TPV--P---LAGVNTATTLVENKKAQLEVIAHDV 143
Query: 219 DPIELFKFL 227
DPIE FL
Sbjct: 144 DPIEPVVFL 152
Score = 101 (40.6 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 38/116 (32%), Positives = 56/116 (48%)
Query: 38 LFEKKARNFGIGQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRLKVPPPVHQFTQAVDKQ 97
LFEK+ +NF IGQD QP ++W Q+A+ K LK P + QF QA+D+Q
Sbjct: 34 LFEKRPKNFRIGQDTQP-------LQW--------QRAIFCKWLKGPLAIDQFPQALDRQ 78
Query: 98 TGQDIQPKRDLSRFVKWPKYIRIQRQKAVLQKRL-KVPPP---VHQFTQAVDKQTA 149
T L+ + QR A L+++L + P P V+ T V+ + A
Sbjct: 79 TATPYLQLLKLAHKCRPETKQEKQRLLAWLRRKLQRTPVPLAGVNTATTLVENKKA 134
Score = 81 (33.6 bits), Expect = 3.0e-18, Sum P(2) = 3.0e-18
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 314 SSDKANLAKLIESVKVNFTDRYDEIRRQWGGGSLGSKS 351
+ DK LAKL+E+ + N+ DR WGG LG KS
Sbjct: 190 NEDKGALAKLVEAARTNYNDR----SHHWGGNVLGPKS 223
>UNIPROTKB|Q2MHD3 [details] [associations]
symbol:RPL7A "60S ribosomal protein L7a" species:9031
"Gallus gallus" [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0022625 "cytosolic large
ribosomal subunit" evidence=IEA] [GO:0042788 "polysomal ribosome"
evidence=IEA] InterPro:IPR004037 PROSITE:PS01082 InterPro:IPR004038
InterPro:IPR001921 Pfam:PF01248 GO:GO:0042254 GO:GO:0042788
GO:GO:0022625 InterPro:IPR018492 PRINTS:PR00881
HOGENOM:HOG000216644 PRINTS:PR00882 GeneTree:ENSGT00390000004753
UniGene:Gga.4080 HOVERGEN:HBG058488 EMBL:AADN02026482 EMBL:AB221488
IPI:IPI00821871 STRING:Q2MHD3 Ensembl:ENSGALT00000005066
InParanoid:Q2MHD3 Uniprot:Q2MHD3
Length = 108
Score = 151 (58.2 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 28/38 (73%), Positives = 33/38 (86%)
Query: 287 HDVDPIELVLFLPALCRKMGIPYCIVDSSDKANLAKLI 324
HDVDPIELV+FLPALCRKMG+PYCI+ S KA L +L+
Sbjct: 1 HDVDPIELVVFLPALCRKMGVPYCIIKS--KARLGRLV 36
Score = 140 (54.3 bits), Expect = 9.3e-13, Sum P(2) = 9.3e-13
Identities = 26/45 (57%), Positives = 32/45 (71%)
Query: 307 IPYCIVDSSDKANLAKLIESVKVNFTDRYDEIRRQWGGGSLGSKS 351
+ + V+ DK LAKL+E+VK N+ DRYDEIRR WGG LG KS
Sbjct: 44 VAFTQVNPEDKGALAKLVEAVKTNYNDRYDEIRRHWGGNVLGPKS 88
Score = 51 (23.0 bits), Expect = 9.3e-13, Sum P(2) = 9.3e-13
Identities = 10/12 (83%), Positives = 10/12 (83%)
Query: 216 HDVDPIELFKFL 227
HDVDPIEL FL
Sbjct: 1 HDVDPIELVVFL 12
>UNIPROTKB|P54066 [details] [associations]
symbol:rpl7ae "50S ribosomal protein L7Ae" species:243232
"Methanocaldococcus jannaschii DSM 2661" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR000948 InterPro:IPR004037
InterPro:IPR022481 PRINTS:PR00884 PROSITE:PS01082 HAMAP:MF_00326
InterPro:IPR004038 Pfam:PF01248 GO:GO:0006412 GO:GO:0042254
GO:GO:0003723 GO:GO:0005840 GO:GO:0003735 EMBL:L77117
GenomeReviews:L77117_GR eggNOG:COG1358 InterPro:IPR018492
PRINTS:PR00881 KO:K02936 RefSeq:NP_248198.1 PDB:1RA4 PDB:1SDS
PDB:1XBI PDB:3PAF PDBsum:1RA4 PDBsum:1SDS PDBsum:1XBI PDBsum:3PAF
ProteinModelPortal:P54066 SMR:P54066 IntAct:P54066 GeneID:1452098
KEGG:mja:MJ_1203 OMA:EDVDPPE ProtClustDB:PRK04175
EvolutionaryTrace:P54066 TIGRFAMs:TIGR03677 Uniprot:P54066
Length = 117
Score = 134 (52.2 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 32/63 (50%), Positives = 39/63 (61%)
Query: 260 KPNQIKQGTNTVTRLVVKKKASLVIIAHDVDPIELVLFLPALCRKMGIPYCIVDSSDKAN 319
K +IK+G N VT+ V + A LVIIA DV P E+V LP LC + GIPY V S K +
Sbjct: 23 KAQKIKKGANEVTKAVERGIAKLVIIAEDVKPEEVVAHLPYLCEEKGIPYAYVAS--KQD 80
Query: 320 LAK 322
L K
Sbjct: 81 LGK 83
>DICTYBASE|DDB_G0282243 [details] [associations]
symbol:nhp2l1 "non-histone chromosome protein 2-like
1" species:44689 "Dictyostelium discoideum" [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA;ISS] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR002415 InterPro:IPR004037 PRINTS:PR00883
PROSITE:PS01082 dictyBase:DDB_G0282243 InterPro:IPR004038
Pfam:PF01248 GO:GO:0005730 GO:GO:0008380 GO:GO:0006397
GO:GO:0005681 GO:GO:0042254 GO:GO:0003723 EMBL:AAFI02000046
eggNOG:COG1358 KO:K12845 OMA:QASNYKQ InterPro:IPR018492
PRINTS:PR00881 RefSeq:XP_640305.1 HSSP:P55769
ProteinModelPortal:Q54ST0 SMR:Q54ST0 STRING:Q54ST0 PRIDE:Q54ST0
EnsemblProtists:DDB0233512 GeneID:8623481 KEGG:ddi:DDB_G0282243
Uniprot:Q54ST0
Length = 129
Score = 121 (47.7 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 22/59 (37%), Positives = 34/59 (57%)
Query: 263 QIKQGTNTVTRLVVKKKASLVIIAHDVDPIELVLFLPALCRKMGIPYCIVDSSDKANLA 321
Q+K+G N T+ V + A V++A D +P+E++L +P LC IPY V S + A
Sbjct: 34 QLKKGANECTKAVSRSTAEFVVLAADAEPLEILLHIPLLCEDKNIPYVFVSSKSELGRA 92
>FB|FBgn0015393 [details] [associations]
symbol:hoip "hoi-polloi" species:7227 "Drosophila
melanogaster" [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS]
[GO:0030532 "small nuclear ribonucleoprotein complex" evidence=ISS]
[GO:0007399 "nervous system development" evidence=IMP] [GO:0007422
"peripheral nervous system development" evidence=TAS] [GO:0003729
"mRNA binding" evidence=ISS] [GO:0005634 "nucleus" evidence=NAS]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0071011 "precatalytic spliceosome"
evidence=IDA] InterPro:IPR002415 InterPro:IPR004037 PRINTS:PR00883
PROSITE:PS01082 InterPro:IPR004038 Pfam:PF01248 GO:GO:0005730
EMBL:AE014134 GO:GO:0007422 GO:GO:0042254 GO:GO:0003723
GO:GO:0071011 GO:GO:0000398 GO:GO:0030532 eggNOG:COG1358
GeneTree:ENSGT00550000074840 KO:K12845 OMA:QASNYKQ
InterPro:IPR018492 PRINTS:PR00881 EMBL:AF208396 RefSeq:NP_524714.1
UniGene:Dm.20299 ProteinModelPortal:Q9U3Z7 SMR:Q9U3Z7
DIP:DIP-21473N IntAct:Q9U3Z7 MINT:MINT-966432 STRING:Q9U3Z7
PaxDb:Q9U3Z7 PRIDE:Q9U3Z7 EnsemblMetazoa:FBtr0079846 GeneID:44173
KEGG:dme:Dmel_CG3949 UCSC:CG3949-RA CTD:44173 FlyBase:FBgn0015393
InParanoid:Q9U3Z7 OrthoDB:EOG46WWRZ PhylomeDB:Q9U3Z7
GenomeRNAi:44173 NextBio:836941 Bgee:Q9U3Z7 GermOnline:CG3949
Uniprot:Q9U3Z7
Length = 127
Score = 119 (46.9 bits), Expect = 7.2e-07, P = 7.2e-07
Identities = 21/53 (39%), Positives = 34/53 (64%)
Query: 262 NQIKQGTNTVTRLVVKKKASLVIIAHDVDPIELVLFLPALCRKMGIPYCIVDS 314
NQ+++G N T+ + + A +V++A D +PIE++L LP LC +PY V S
Sbjct: 32 NQLRKGANEATKTLNRGLADIVVLAGDAEPIEILLHLPLLCEDKNVPYVFVRS 84
>CGD|CAL0002459 [details] [associations]
symbol:orf19.5885 species:5476 "Candida albicans" [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0031428 "box C/D
snoRNP complex" evidence=IEA] [GO:0046540 "U4/U6 x U5 tri-snRNP
complex" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0000462 "maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
InterPro:IPR002415 InterPro:IPR004037 PRINTS:PR00883
PROSITE:PS01082 CGD:CAL0002459 InterPro:IPR004038 Pfam:PF01248
GO:GO:0005730 GO:GO:0008380 GO:GO:0006397 GO:GO:0005681
GO:GO:0003723 EMBL:AACQ01000003 EMBL:AACQ01000004 GO:GO:0006364
HSSP:P39990 eggNOG:COG1358 KO:K12845 InterPro:IPR018492
PRINTS:PR00881 RefSeq:XP_722954.1 RefSeq:XP_723101.1
ProteinModelPortal:Q5ANL6 SMR:Q5ANL6 STRING:Q5ANL6 GeneID:3635173
GeneID:3635369 KEGG:cal:CaO19.13306 KEGG:cal:CaO19.5885
Uniprot:Q5ANL6
Length = 126
Score = 112 (44.5 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 23/60 (38%), Positives = 36/60 (60%)
Query: 263 QIKQGTNTVTRLVVKKKASLVIIAHDVDPIELVLFLPALCRKMGIPYCIVDSSDKANLAK 322
Q+K+G N T+ + + + +I+A D +PIE++L LP LC +PY V S KA L +
Sbjct: 32 QLKKGANEATKTLNRGISEFIIMAADTEPIEILLHLPLLCEDKNVPYVFVPS--KAALGR 89
>WB|WBGene00010896 [details] [associations]
symbol:M28.5 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0010171 "body
morphogenesis" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] InterPro:IPR002415
InterPro:IPR004037 PRINTS:PR00883 PROSITE:PS01082
InterPro:IPR004038 Pfam:PF01248 GO:GO:0009792 GO:GO:0006898
GO:GO:0040007 GO:GO:0005730 GO:GO:0002119 GO:GO:0008380
GO:GO:0006397 GO:GO:0010171 GO:GO:0000003 GO:GO:0005681
GO:GO:0042254 GO:GO:0003723 eggNOG:COG1358
GeneTree:ENSGT00550000074840 HOGENOM:HOG000055226 KO:K12845
OMA:QASNYKQ InterPro:IPR018492 PRINTS:PR00881 EMBL:Z49911
PIR:T23808 RefSeq:NP_496300.1 ProteinModelPortal:Q21568 SMR:Q21568
STRING:Q21568 PaxDb:Q21568 EnsemblMetazoa:M28.5.1
EnsemblMetazoa:M28.5.2 GeneID:174645 KEGG:cel:CELE_M28.5
UCSC:M28.5.1 CTD:174645 WormBase:M28.5 InParanoid:Q21568
NextBio:884890 Uniprot:Q21568
Length = 128
Score = 110 (43.8 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 21/60 (35%), Positives = 37/60 (61%)
Query: 263 QIKQGTNTVTRLVVKKKASLVIIAHDVDPIELVLFLPALCRKMGIPYCIVDSSDKANLAK 322
Q+K+G N T+ + + + ++++A D +P+E++L LP LC +PY V S KA L +
Sbjct: 34 QLKKGANEATKTLNRGISEIIVMAADAEPLEILLHLPLLCEDKNVPYVFVRS--KAALGR 91
>SGD|S000000752 [details] [associations]
symbol:SNU13 "RNA binding protein" species:4932
"Saccharomyces cerevisiae" [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IMP;IPI] [GO:0005730 "nucleolus" evidence=IEA;IDA]
[GO:0031428 "box C/D snoRNP complex" evidence=IDA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA;ISS;IMP;IDA;IPI] [GO:0046540 "U4/U6 x U5 tri-snRNP
complex" evidence=IDA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006364
"rRNA processing" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0000462
"maturation of SSU-rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP] [GO:0032040
"small-subunit processome" evidence=IDA] InterPro:IPR002415
InterPro:IPR004037 PRINTS:PR00883 PROSITE:PS01082 SGD:S000000752
InterPro:IPR004038 Pfam:PF01248 GO:GO:0005681 GO:GO:0003723
EMBL:BK006939 GO:GO:0000398 EMBL:U18530 GO:GO:0046540 GO:GO:0032040
GO:GO:0000462 GO:GO:0031428 eggNOG:COG1358
GeneTree:ENSGT00550000074840 HOGENOM:HOG000055226 KO:K12845
OMA:QASNYKQ InterPro:IPR018492 PRINTS:PR00881 OrthoDB:EOG4VQDZT
EMBL:AY558377 PIR:S50433 RefSeq:NP_010888.1 PDB:1ZWZ PDB:2ALE
PDBsum:1ZWZ PDBsum:2ALE ProteinModelPortal:P39990 SMR:P39990
DIP:DIP-2870N IntAct:P39990 MINT:MINT-627070 STRING:P39990
PaxDb:P39990 PeptideAtlas:P39990 EnsemblFungi:YEL026W GeneID:856687
KEGG:sce:YEL026W CYGD:YEL026w EvolutionaryTrace:P39990
NextBio:982724 Genevestigator:P39990 GermOnline:YEL026W
Uniprot:P39990
Length = 126
Score = 109 (43.4 bits), Expect = 9.1e-06, P = 9.1e-06
Identities = 20/52 (38%), Positives = 32/52 (61%)
Query: 263 QIKQGTNTVTRLVVKKKASLVIIAHDVDPIELVLFLPALCRKMGIPYCIVDS 314
Q+K+G N T+ + + + +I+A D +PIE++L LP LC +PY V S
Sbjct: 32 QLKKGANEATKTLNRGISEFIIMAADCEPIEILLHLPLLCEDKNVPYVFVPS 83
>ASPGD|ASPL0000057404 [details] [associations]
symbol:AN1319 species:162425 "Emericella nidulans"
[GO:0032040 "small-subunit processome" evidence=IEA] [GO:0031428
"box C/D snoRNP complex" evidence=IEA] [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
InterPro:IPR002415 InterPro:IPR004037 PRINTS:PR00883
PROSITE:PS01082 InterPro:IPR004038 Pfam:PF01248 GO:GO:0005730
EMBL:BN001308 GO:GO:0042254 GO:GO:0003723 GO:GO:0030529
EMBL:AACD01000018 eggNOG:COG1358 HOGENOM:HOG000055226 KO:K12845
OMA:QASNYKQ InterPro:IPR018492 PRINTS:PR00881 OrthoDB:EOG4VQDZT
RefSeq:XP_658923.1 ProteinModelPortal:Q5BDR1 SMR:Q5BDR1
STRING:Q5BDR1 EnsemblFungi:CADANIAT00001295 GeneID:2877096
KEGG:ani:AN1319.2 Uniprot:Q5BDR1
Length = 126
Score = 108 (43.1 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 20/52 (38%), Positives = 31/52 (59%)
Query: 263 QIKQGTNTVTRLVVKKKASLVIIAHDVDPIELVLFLPALCRKMGIPYCIVDS 314
Q+K+G N T+ + + + LVI+A D P+ ++L LP LC +PY V S
Sbjct: 32 QLKKGANETTKTLNRGTSELVILAADTTPLPIILHLPLLCEDKNVPYVYVPS 83
>UNIPROTKB|F1NII6 [details] [associations]
symbol:NHP2L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0030515 "snoRNA binding"
evidence=IEA] InterPro:IPR002415 InterPro:IPR004037 PRINTS:PR00883
PROSITE:PS01082 InterPro:IPR004038 Pfam:PF01248 GO:GO:0005730
GO:GO:0030515 GO:GO:0042254 GO:GO:0030529
GeneTree:ENSGT00550000074840 OMA:QASNYKQ InterPro:IPR018492
PRINTS:PR00881 EMBL:AADN02006063 IPI:IPI00571358
Ensembl:ENSGALT00000019461 Uniprot:F1NII6
Length = 144
Score = 108 (43.1 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 18/52 (34%), Positives = 32/52 (61%)
Query: 263 QIKQGTNTVTRLVVKKKASLVIIAHDVDPIELVLFLPALCRKMGIPYCIVDS 314
Q+++G N T+ + + A +++A D +P+E++L LP LC +PY V S
Sbjct: 50 QLRKGANEATKTLNRGIAEFIVMAADAEPLEIILHLPLLCEDKNVPYVFVRS 101
>POMBASE|SPAC607.03c [details] [associations]
symbol:snu13 "U3 snoRNP-associated protein Snu13"
species:4896 "Schizosaccharomyces pombe" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0030490 "maturation of
SSU-rRNA" evidence=ISO] [GO:0032040 "small-subunit processome"
evidence=ISO] [GO:0045292 "mRNA cis splicing, via spliceosome"
evidence=ISO] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=ISO] InterPro:IPR002415 InterPro:IPR004037 PRINTS:PR00883
PROSITE:PS01082 InterPro:IPR004038 Pfam:PF01248 PomBase:SPAC607.03c
EMBL:CU329670 GO:GO:0005730 GenomeReviews:CU329670_GR GO:GO:0005681
GO:GO:0003723 GO:GO:0046540 GO:GO:0032040 GO:GO:0030490
GO:GO:0045292 HSSP:P39990 eggNOG:COG1358 HOGENOM:HOG000055226
KO:K12845 OMA:QASNYKQ InterPro:IPR018492 PRINTS:PR00881
EMBL:AF087136 PIR:T50223 RefSeq:NP_593592.1
ProteinModelPortal:O74690 SMR:O74690 STRING:O74690
EnsemblFungi:SPAC607.03c.1 GeneID:2542663 KEGG:spo:SPAC607.03c
OrthoDB:EOG4VQDZT NextBio:20803711 Uniprot:O74690
Length = 125
Score = 108 (43.1 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 21/60 (35%), Positives = 36/60 (60%)
Query: 263 QIKQGTNTVTRLVVKKKASLVIIAHDVDPIELVLFLPALCRKMGIPYCIVDSSDKANLAK 322
Q+++G N T+ + + + +++A D +PIE++L LP LC +PY V S KA L +
Sbjct: 31 QLRKGANEATKTLNRGISEFIVMAADTEPIEILLHLPLLCEDKNVPYVFVPS--KAALGR 88
>RGD|1566078 [details] [associations]
symbol:RGD1566078 "similar to NHP2-like protein 1 (High mobility
group-like nuclear protein 2 homolog 1) (Sperm specific antigen 1)"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] InterPro:IPR002415 InterPro:IPR004037
PRINTS:PR00883 PROSITE:PS01082 InterPro:IPR004038 Pfam:PF01248
RGD:1566078 GO:GO:0005730 GO:GO:0042254 GO:GO:0003723 GO:GO:0030529
GeneTree:ENSGT00550000074840 KO:K12845 InterPro:IPR018492
PRINTS:PR00881 RefSeq:XP_001053559.1 RefSeq:XP_343838.3
Ensembl:ENSRNOT00000013187 GeneID:363514 KEGG:rno:363514 CTD:363514
OMA:RISNAVD Uniprot:H7C5X3
Length = 128
Score = 106 (42.4 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 18/60 (30%), Positives = 34/60 (56%)
Query: 263 QIKQGTNTVTRLVVKKKASLVIIAHDVDPIELVLFLPALCRKMGIPYCIVDSSDKANLAK 322
Q+++G N T+ + + + +++A D +P+E++L LP LC +PY V S A+
Sbjct: 34 QLRKGANEDTKTLNRGVSEFIVMAADAEPLEIILHLPLLCEDKNVPYVFVHSKQALGRAR 93
>UNIPROTKB|Q3B8S0 [details] [associations]
symbol:NHP2L1 "NHP2-like protein 1" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0030515 "snoRNA
binding" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] InterPro:IPR002415 InterPro:IPR004037
PRINTS:PR00883 PROSITE:PS01082 InterPro:IPR004038 Pfam:PF01248
GO:GO:0005730 GO:GO:0008380 GO:GO:0030515 GO:GO:0006397
GO:GO:0005681 GO:GO:0042254 EMBL:BC103317 IPI:IPI00696455
RefSeq:NP_001070472.1 UniGene:Bt.4185 HSSP:P39990
ProteinModelPortal:Q3B8S0 SMR:Q3B8S0 STRING:Q3B8S0 PRIDE:Q3B8S0
Ensembl:ENSBTAT00000008022 GeneID:767931 KEGG:bta:767931 CTD:4809
eggNOG:COG1358 GeneTree:ENSGT00550000074840 HOGENOM:HOG000055226
HOVERGEN:HBG000328 InParanoid:Q3B8S0 KO:K12845 OMA:QASNYKQ
OrthoDB:EOG4M91T0 NextBio:20918288 InterPro:IPR018492
PRINTS:PR00881 Uniprot:Q3B8S0
Length = 128
Score = 105 (42.0 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 17/52 (32%), Positives = 32/52 (61%)
Query: 263 QIKQGTNTVTRLVVKKKASLVIIAHDVDPIELVLFLPALCRKMGIPYCIVDS 314
Q+++G N T+ + + + +++A D +P+E++L LP LC +PY V S
Sbjct: 34 QLRKGANEATKTLNRGISEFIVMAADAEPLEIILHLPLLCEDKNVPYVFVRS 85
>UNIPROTKB|E2RRM7 [details] [associations]
symbol:NHP2L1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR002415 InterPro:IPR004037 PRINTS:PR00883
PROSITE:PS01082 InterPro:IPR004038 Pfam:PF01248 GO:GO:0005730
GO:GO:0042254 GO:GO:0003723 GO:GO:0030529
GeneTree:ENSGT00550000074840 OMA:QASNYKQ InterPro:IPR018492
PRINTS:PR00881 EMBL:AAEX03007292 UniGene:Cfa.9295
ProteinModelPortal:E2RRM7 PRIDE:E2RRM7 Ensembl:ENSCAFT00000001595
NextBio:20850489 Uniprot:E2RRM7
Length = 128
Score = 105 (42.0 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 17/52 (32%), Positives = 32/52 (61%)
Query: 263 QIKQGTNTVTRLVVKKKASLVIIAHDVDPIELVLFLPALCRKMGIPYCIVDS 314
Q+++G N T+ + + + +++A D +P+E++L LP LC +PY V S
Sbjct: 34 QLRKGANEATKTLNRGISEFIVMAADAEPLEIILHLPLLCEDKNVPYVFVRS 85
>UNIPROTKB|B1AHD1 [details] [associations]
symbol:NHP2L1 "NHP2-like protein 1" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR002415 InterPro:IPR004037 PRINTS:PR00883
PROSITE:PS01082 InterPro:IPR004038 Pfam:PF01248 GO:GO:0005730
GO:GO:0042254 GO:GO:0003723 GO:GO:0030529 EMBL:Z83840
HOGENOM:HOG000055226 HOVERGEN:HBG000328 OMA:QASNYKQ
OrthoDB:EOG4M91T0 InterPro:IPR018492 PRINTS:PR00881
UniGene:Hs.182255 HGNC:HGNC:7819 ChiTaRS:NHP2L1 IPI:IPI00893746
SMR:B1AHD1 STRING:B1AHD1 Ensembl:ENST00000402458 Uniprot:B1AHD1
Length = 132
Score = 105 (42.0 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 17/52 (32%), Positives = 32/52 (61%)
Query: 263 QIKQGTNTVTRLVVKKKASLVIIAHDVDPIELVLFLPALCRKMGIPYCIVDS 314
Q+++G N T+ + + + +++A D +P+E++L LP LC +PY V S
Sbjct: 38 QLRKGANEATKTLNRGISEFIVMAADAEPLEIILHLPLLCEDKNVPYVFVRS 89
>UNIPROTKB|P55769 [details] [associations]
symbol:NHP2L1 "NHP2-like protein 1" species:9606 "Homo
sapiens" [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0003723 "RNA
binding" evidence=TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0005730 "nucleolus" evidence=TAS] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0031428 "box C/D snoRNP complex" evidence=NAS]
[GO:0030515 "snoRNA binding" evidence=IDA] Reactome:REACT_71
InterPro:IPR002415 InterPro:IPR004037 PRINTS:PR00883
PROSITE:PS01082 InterPro:IPR004038 Pfam:PF01248 GO:GO:0005654
Reactome:REACT_1675 GO:GO:0005681 GO:GO:0042254 GO:GO:0003723
GO:GO:0000398 EMBL:Z83840 GO:GO:0031428 CTD:4809 eggNOG:COG1358
HOGENOM:HOG000055226 HOVERGEN:HBG000328 KO:K12845 OrthoDB:EOG4M91T0
InterPro:IPR018492 PRINTS:PR00881 EMBL:D50420 EMBL:AF155235
EMBL:AF091076 EMBL:CR456531 EMBL:BC005358 EMBL:BC019282
IPI:IPI00026167 RefSeq:NP_001003796.1 RefSeq:NP_004999.1
UniGene:Hs.182255 PDB:1E7K PDB:2JNB PDB:2OZB PDB:3SIU PDB:3SIV
PDBsum:1E7K PDBsum:2JNB PDBsum:2OZB PDBsum:3SIU PDBsum:3SIV
ProteinModelPortal:P55769 SMR:P55769 IntAct:P55769
MINT:MINT-1382515 STRING:P55769 PhosphoSite:P55769 DMDM:2500345
SWISS-2DPAGE:P55769 PaxDb:P55769 PeptideAtlas:P55769 PRIDE:P55769
DNASU:4809 Ensembl:ENST00000215956 Ensembl:ENST00000355257
Ensembl:ENST00000401959 GeneID:4809 KEGG:hsa:4809 UCSC:uc003bat.3
GeneCards:GC22M042069 HGNC:HGNC:7819 HPA:HPA029199 MIM:601304
MIM:601876 neXtProt:NX_P55769 PharmGKB:PA31621 PhylomeDB:P55769
ChiTaRS:NHP2L1 EvolutionaryTrace:P55769 GenomeRNAi:4809
NextBio:18532 ArrayExpress:P55769 Bgee:P55769 CleanEx:HS_NHP2L1
Genevestigator:P55769 GermOnline:ENSG00000100138 Uniprot:P55769
Length = 128
Score = 105 (42.0 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 17/52 (32%), Positives = 32/52 (61%)
Query: 263 QIKQGTNTVTRLVVKKKASLVIIAHDVDPIELVLFLPALCRKMGIPYCIVDS 314
Q+++G N T+ + + + +++A D +P+E++L LP LC +PY V S
Sbjct: 34 QLRKGANEATKTLNRGISEFIVMAADAEPLEIILHLPLLCEDKNVPYVFVRS 85
>UNIPROTKB|F2Z5V3 [details] [associations]
symbol:NHP2L1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030515 "snoRNA binding" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
InterPro:IPR002415 InterPro:IPR004037 PRINTS:PR00883
PROSITE:PS01082 InterPro:IPR004038 Pfam:PF01248 GO:GO:0005730
GO:GO:0030515 GO:GO:0042254 GO:GO:0030529 CTD:4809
GeneTree:ENSGT00550000074840 KO:K12845 OMA:QASNYKQ
InterPro:IPR018492 PRINTS:PR00881 EMBL:CU633382
RefSeq:NP_001177155.1 RefSeq:NP_001177156.1 UniGene:Ssc.21604
SMR:F2Z5V3 Ensembl:ENSSSCT00000000064 Ensembl:ENSSSCT00000023171
GeneID:100155420 KEGG:ssc:100155420 Uniprot:F2Z5V3
Length = 128
Score = 105 (42.0 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 17/52 (32%), Positives = 32/52 (61%)
Query: 263 QIKQGTNTVTRLVVKKKASLVIIAHDVDPIELVLFLPALCRKMGIPYCIVDS 314
Q+++G N T+ + + + +++A D +P+E++L LP LC +PY V S
Sbjct: 34 QLRKGANEATKTLNRGISEFIVMAADAEPLEIILHLPLLCEDKNVPYVFVRS 85
>RGD|1303103 [details] [associations]
symbol:Nhp2l1 "NHP2 non-histone chromosome protein 2-like 1 (S.
cerevisiae)" species:10116 "Rattus norvegicus" [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0007338 "single fertilization"
evidence=ISO] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0030515 "snoRNA binding"
evidence=ISO] InterPro:IPR002415 InterPro:IPR004037 PRINTS:PR00883
PROSITE:PS01082 InterPro:IPR004038 Pfam:PF01248 RGD:1303103
GO:GO:0005730 GO:GO:0008380 GO:GO:0006397 GO:GO:0005681
GO:GO:0042254 GO:GO:0003723 CTD:4809 eggNOG:COG1358
GeneTree:ENSGT00550000074840 HOGENOM:HOG000055226
HOVERGEN:HBG000328 KO:K12845 OMA:QASNYKQ OrthoDB:EOG4M91T0
InterPro:IPR018492 PRINTS:PR00881 EMBL:BC058493 EMBL:H35080
IPI:IPI00191895 RefSeq:NP_997680.1 RefSeq:XP_003749200.1
RefSeq:XP_003753481.1 UniGene:Rn.1293 ProteinModelPortal:P55770
SMR:P55770 STRING:P55770 PRIDE:P55770 Ensembl:ENSRNOT00000009152
Ensembl:ENSRNOT00000030108 GeneID:100359574 GeneID:300092
KEGG:rno:100359574 KEGG:rno:300092 UCSC:RGD:1303103
InParanoid:P55770 NextBio:646327 Genevestigator:P55770
GermOnline:ENSRNOG00000006762 GermOnline:ENSRNOG00000025154
Uniprot:P55770
Length = 128
Score = 105 (42.0 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 17/52 (32%), Positives = 32/52 (61%)
Query: 263 QIKQGTNTVTRLVVKKKASLVIIAHDVDPIELVLFLPALCRKMGIPYCIVDS 314
Q+++G N T+ + + + +++A D +P+E++L LP LC +PY V S
Sbjct: 34 QLRKGANEATKTLNRGISEFIVMAADAEPLEIILHLPLLCEDKNVPYVFVRS 85
>ZFIN|ZDB-GENE-030131-9670 [details] [associations]
symbol:nhp2l1b "NHP2 non-histone chromosome
protein 2-like 1b (S. cerevisiae)" species:7955 "Danio rerio"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR002415 InterPro:IPR004037 PRINTS:PR00883
PROSITE:PS01082 InterPro:IPR004038 Pfam:PF01248
ZFIN:ZDB-GENE-030131-9670 GO:GO:0005730 GO:GO:0042254 GO:GO:0003723
GO:GO:0030529 eggNOG:COG1358 GeneTree:ENSGT00550000074840
HOGENOM:HOG000055226 HOVERGEN:HBG000328 KO:K12845 OMA:QASNYKQ
OrthoDB:EOG4M91T0 InterPro:IPR018492 PRINTS:PR00881 HSSP:P55769
EMBL:CU104767 EMBL:BC046034 IPI:IPI00497597 RefSeq:NP_955829.1
UniGene:Dr.106039 SMR:Q7ZV23 STRING:Q7ZV23
Ensembl:ENSDART00000029133 GeneID:321114 KEGG:dre:321114 CTD:321114
InParanoid:Q7ZV23 NextBio:20807238 Uniprot:Q7ZV23
Length = 128
Score = 105 (42.0 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 17/52 (32%), Positives = 32/52 (61%)
Query: 263 QIKQGTNTVTRLVVKKKASLVIIAHDVDPIELVLFLPALCRKMGIPYCIVDS 314
Q+++G N T+ + + + +++A D +P+E++L LP LC +PY V S
Sbjct: 34 QLRKGANEATKTLNRGISEFIVMAADAEPLEIILHLPLLCEDKNVPYVFVRS 85
>ZFIN|ZDB-GENE-040426-879 [details] [associations]
symbol:nhp2l1a "NHP2 non-histone chromosome protein
2-like 1a (S. cerevisiae)" species:7955 "Danio rerio" [GO:0003723
"RNA binding" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] InterPro:IPR002415
InterPro:IPR004037 PRINTS:PR00883 PROSITE:PS01082
InterPro:IPR004038 Pfam:PF01248 ZFIN:ZDB-GENE-040426-879
GO:GO:0005730 GO:GO:0042254 GO:GO:0003723 GO:GO:0030529
eggNOG:COG1358 GeneTree:ENSGT00550000074840 HOGENOM:HOG000055226
HOVERGEN:HBG000328 KO:K12845 OrthoDB:EOG4M91T0 InterPro:IPR018492
PRINTS:PR00881 HSSP:P55769 OMA:ANEGIRL EMBL:CT583687 EMBL:BC050495
EMBL:BC066453 IPI:IPI00492489 RefSeq:NP_956606.1 UniGene:Dr.77772
SMR:Q7ZU93 STRING:Q7ZU93 Ensembl:ENSDART00000093031 GeneID:393282
KEGG:dre:393282 CTD:393282 InParanoid:Q7ZU93 NextBio:20814339
Uniprot:Q7ZU93
Length = 128
Score = 105 (42.0 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 17/52 (32%), Positives = 32/52 (61%)
Query: 263 QIKQGTNTVTRLVVKKKASLVIIAHDVDPIELVLFLPALCRKMGIPYCIVDS 314
Q+++G N T+ + + + +++A D +P+E++L LP LC +PY V S
Sbjct: 34 QLRKGANEATKTLNRGISEFIVMAADAEPLEIILHLPLLCEDKNVPYVFVRS 85
>UNIPROTKB|J9P8E9 [details] [associations]
symbol:LOC609886 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR002415 InterPro:IPR004037 PRINTS:PR00883
PROSITE:PS01082 InterPro:IPR004038 Pfam:PF01248 GO:GO:0005730
GO:GO:0042254 GO:GO:0003723 GO:GO:0030529
GeneTree:ENSGT00550000074840 KO:K12845 InterPro:IPR018492
PRINTS:PR00881 EMBL:AAEX03026883 RefSeq:XP_852208.2
Ensembl:ENSCAFT00000029620 GeneID:609886 KEGG:cfa:609886
OMA:ANEGIRL Uniprot:J9P8E9
Length = 128
Score = 102 (41.0 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 17/52 (32%), Positives = 31/52 (59%)
Query: 263 QIKQGTNTVTRLVVKKKASLVIIAHDVDPIELVLFLPALCRKMGIPYCIVDS 314
Q+++G N T+ + + + +++A D P+E++L LP LC +PY V S
Sbjct: 34 QLRKGANEATKTLNRGISEFIVMAADAKPLEIILHLPLLCEDKNVPYVFVRS 85
>TAIR|locus:2127455 [details] [associations]
symbol:AT4G22380 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] InterPro:IPR002415 InterPro:IPR004037
PRINTS:PR00883 PROSITE:PS01082 InterPro:IPR004038 Pfam:PF01248
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0005730 GO:GO:0042254
GO:GO:0003723 GO:GO:0005840 eggNOG:COG1358 HOGENOM:HOG000055226
KO:K12845 OMA:QASNYKQ InterPro:IPR018492 PRINTS:PR00881 HSSP:P55769
EMBL:AY086674 EMBL:BT024580 IPI:IPI00546422 RefSeq:NP_193969.1
UniGene:At.70128 ProteinModelPortal:Q8LCC7 SMR:Q8LCC7 STRING:Q8LCC7
PRIDE:Q8LCC7 ProMEX:Q8LCC7 EnsemblPlants:AT4G22380.1 GeneID:828333
KEGG:ath:AT4G22380 TAIR:At4g22380 InParanoid:Q8LCC7
PhylomeDB:Q8LCC7 ProtClustDB:CLSN2685756 Genevestigator:Q8LCC7
Uniprot:Q8LCC7
Length = 128
Score = 99 (39.9 bits), Expect = 0.00011, P = 0.00011
Identities = 18/52 (34%), Positives = 31/52 (59%)
Query: 263 QIKQGTNTVTRLVVKKKASLVIIAHDVDPIELVLFLPALCRKMGIPYCIVDS 314
Q+K+G N T+ + + + V++A D +P+E++L LP L +PY V S
Sbjct: 34 QLKKGANEATKTLNRGISEFVVMAADAEPLEILLHLPLLAEDKNVPYVFVPS 85
>UNIPROTKB|G4MRY0 [details] [associations]
symbol:MGG_02467 "Ribonucleoprotein-associated protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR002415 InterPro:IPR004037
PRINTS:PR00883 PROSITE:PS01082 InterPro:IPR004038 Pfam:PF01248
GO:GO:0005730 GO:GO:0042254 GO:GO:0003723 GO:GO:0030529
EMBL:CM001231 GO:GO:0043581 KO:K12845 InterPro:IPR018492
PRINTS:PR00881 RefSeq:XP_003709261.1 ProteinModelPortal:G4MRY0
SMR:G4MRY0 EnsemblFungi:MGG_02467T0 GeneID:2681564
KEGG:mgr:MGG_02467 Uniprot:G4MRY0
Length = 126
Score = 98 (39.6 bits), Expect = 0.00015, P = 0.00015
Identities = 18/52 (34%), Positives = 31/52 (59%)
Query: 263 QIKQGTNTVTRLVVKKKASLVIIAHDVDPIELVLFLPALCRKMGIPYCIVDS 314
Q+K+G N T+ + + + LVI+A D +P+ ++L +P L +PY V S
Sbjct: 32 QLKKGANEATKTLSRGVSELVILAADCEPLAILLHIPLLAEDKNVPYVFVPS 83
>RGD|1309435 [details] [associations]
symbol:Nhp2 "NHP2 ribonucleoprotein" species:10116 "Rattus
norvegicus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR002415 PRINTS:PR00883
InterPro:IPR004038 Pfam:PF01248 RGD:1309435 GO:GO:0005730
GO:GO:0003723 EMBL:CH473948 InterPro:IPR018492 PRINTS:PR00881
KO:K11129 CTD:55651 GeneTree:ENSGT00550000074939 OrthoDB:EOG4W3SP7
EMBL:AC105470 IPI:IPI00952476 RefSeq:NP_001099249.1 UniGene:Rn.4216
Ensembl:ENSRNOT00000064984 GeneID:287273 KEGG:rno:287273
UCSC:RGD:1309435 NextBio:625772 Uniprot:D3ZVC6
Length = 121
Score = 97 (39.2 bits), Expect = 0.00019, P = 0.00019
Identities = 18/55 (32%), Positives = 30/55 (54%)
Query: 260 KPNQIKQGTNTVTRLVVKKKASLVIIAHDVDPIELVLFLPALCRKMGIPYCIVDS 314
K QI++G V + V K + ++++A D PIE+ LP +C +PY + S
Sbjct: 24 KQKQIRRGVKEVQKFVNKGEKGIMVLAGDTLPIEVYCHLPVMCEDQNLPYVYIPS 78
>UNIPROTKB|D6RC52 [details] [associations]
symbol:NHP2 "H/ACA ribonucleoprotein complex subunit 2"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] InterPro:IPR002415
PRINTS:PR00883 InterPro:IPR004038 Pfam:PF01248 GO:GO:0005730
GO:GO:0003723 InterPro:IPR018492 PRINTS:PR00881
HOGENOM:HOG000055227 EMBL:AC136632 HGNC:HGNC:14377 ChiTaRS:NHP2
IPI:IPI00966700 ProteinModelPortal:D6RC52 SMR:D6RC52
Ensembl:ENST00000511078 ArrayExpress:D6RC52 Bgee:D6RC52
Uniprot:D6RC52
Length = 132
Score = 96 (38.9 bits), Expect = 0.00024, P = 0.00024
Identities = 18/55 (32%), Positives = 30/55 (54%)
Query: 260 KPNQIKQGTNTVTRLVVKKKASLVIIAHDVDPIELVLFLPALCRKMGIPYCIVDS 314
K QI++G V + V K + ++++A D PIE+ LP +C +PY + S
Sbjct: 56 KQKQIRRGVKEVQKFVNKGEKGIMVLAGDTLPIEVYCHLPVMCEDRNLPYVYIPS 110
>UNIPROTKB|Q8I7X7 [details] [associations]
symbol:Q8I7X7 "H/ACA ribonucleoprotein complex subunit
2-like protein" species:7741 "Branchiostoma belcheri" [GO:0005732
"small nucleolar ribonucleoprotein complex" evidence=ISS]
[GO:0030515 "snoRNA binding" evidence=ISS] [GO:0031118 "rRNA
pseudouridine synthesis" evidence=ISS] InterPro:IPR002415
PRINTS:PR00883 PROSITE:PS01082 InterPro:IPR004038 Pfam:PF01248
GO:GO:0005730 GO:GO:0030515 GO:GO:0031118 GO:GO:0005732
HOVERGEN:HBG000328 InterPro:IPR018492 PRINTS:PR00881 EMBL:AY168452
EMBL:AY043319 ProteinModelPortal:Q8I7X7 Uniprot:Q8I7X7
Length = 159
Score = 104 (41.7 bits), Expect = 0.00058, P = 0.00058
Identities = 20/53 (37%), Positives = 29/53 (54%)
Query: 260 KPNQIKQGTNTVTRLVVKKKASLVIIAHDVDPIELVLFLPALCRKMGIPYCIV 312
K I++G V + + K + +V+IA D PIE+ LP +C IPYC V
Sbjct: 62 KEKNIRKGIRDVQKFIKKGERGIVLIAGDTTPIEVYCHLPVVCEDAKIPYCYV 114
>TAIR|locus:2181514 [details] [associations]
symbol:AT5G08180 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0001510
"RNA methylation" evidence=RCA] [GO:0009165 "nucleotide
biosynthetic process" evidence=RCA] [GO:0009909 "regulation of
flower development" evidence=RCA] [GO:0034968 "histone lysine
methylation" evidence=RCA] InterPro:IPR002415 PRINTS:PR00883
PROSITE:PS01082 InterPro:IPR004038 Pfam:PF01248 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005730 GO:GO:0030515 EMBL:AL357612
GO:GO:0031118 GO:GO:0005732 eggNOG:COG1358 InterPro:IPR018492
PRINTS:PR00881 EMBL:AY050477 EMBL:AF378885 IPI:IPI00539022
PIR:T50503 RefSeq:NP_001190260.1 RefSeq:NP_196435.1 UniGene:At.5453
ProteinModelPortal:Q9LEY9 SMR:Q9LEY9 STRING:Q9LEY9 PaxDb:Q9LEY9
PRIDE:Q9LEY9 EnsemblPlants:AT5G08180.1 EnsemblPlants:AT5G08180.2
GeneID:830714 KEGG:ath:AT5G08180 TAIR:At5g08180
HOGENOM:HOG000055227 InParanoid:Q9LEY9 KO:K11129 OMA:TCCVLVM
PhylomeDB:Q9LEY9 ProtClustDB:CLSN2687267 Genevestigator:Q9LEY9
GermOnline:AT5G08180 Uniprot:Q9LEY9
Length = 156
Score = 102 (41.0 bits), Expect = 0.00091, P = 0.00091
Identities = 20/59 (33%), Positives = 36/59 (61%)
Query: 264 IKQGTNTVTRLVVKKKASLVIIAHDVDPIELVLFLPALCRKMGIPYCIVDSSDKANLAK 322
+K+G V + + + + L +IA ++ PI+++ LP LC + G+PY V S K +LA+
Sbjct: 51 LKRGVKEVVKSIRRGQKGLCVIAGNISPIDVITHLPILCEEAGVPYVYVPS--KEDLAQ 107
>UNIPROTKB|D6RCB9 [details] [associations]
symbol:NHP2 "H/ACA ribonucleoprotein complex subunit 2"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] InterPro:IPR002415
PRINTS:PR00883 InterPro:IPR004038 Pfam:PF01248 GO:GO:0005730
GO:GO:0003723 InterPro:IPR018492 PRINTS:PR00881
HOGENOM:HOG000055227 EMBL:AC136632 HGNC:HGNC:14377 ChiTaRS:NHP2
IPI:IPI00968276 ProteinModelPortal:D6RCB9 SMR:D6RCB9
Ensembl:ENST00000514354 ArrayExpress:D6RCB9 Bgee:D6RCB9
Uniprot:D6RCB9
Length = 135
Score = 96 (38.9 bits), Expect = 0.00097, P = 0.00097
Identities = 18/55 (32%), Positives = 30/55 (54%)
Query: 260 KPNQIKQGTNTVTRLVVKKKASLVIIAHDVDPIELVLFLPALCRKMGIPYCIVDS 314
K QI++G V + V K + ++++A D PIE+ LP +C +PY + S
Sbjct: 56 KQKQIRRGVKEVQKFVNKGEKGIMVLAGDTLPIEVYCHLPVMCEDRNLPYVYIPS 110
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.135 0.396 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 370 294 0.00091 115 3 11 22 0.38 34
33 0.44 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 75
No. of states in DFA: 604 (64 KB)
Total size of DFA: 192 KB (2106 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 21.85u 0.10s 21.95t Elapsed: 00:00:05
Total cpu time: 21.86u 0.10s 21.96t Elapsed: 00:00:06
Start: Thu Aug 15 11:11:13 2013 End: Thu Aug 15 11:11:19 2013