Query psy6070
Match_columns 1454
No_of_seqs 289 out of 1700
Neff 2.2
Searched_HMMs 29240
Date Fri Aug 16 16:54:06 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6070.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/6070hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1i16_A Interleukin 16, LCF; cy 99.5 6.9E-14 2.4E-18 130.7 12.0 94 1299-1394 26-119 (130)
2 3b76_A E3 ubiquitin-protein li 99.5 1E-13 3.4E-18 129.1 11.8 91 1301-1393 23-113 (118)
3 1wi4_A Synip, syntaxin binding 99.5 2.6E-13 8.9E-18 123.8 13.7 93 1298-1394 11-106 (109)
4 3gge_A PDZ domain-containing p 99.5 1.5E-13 5.2E-18 127.5 12.1 87 1301-1394 4-91 (95)
5 2d92_A INAD-like protein; PDZ 99.5 2E-13 6.8E-18 123.3 12.4 91 1301-1393 14-105 (108)
6 1r6j_A Syntenin 1; PDZ, membra 99.5 1.9E-13 6.6E-18 122.4 11.3 78 1302-1392 4-81 (82)
7 2awx_A Synapse associated prot 99.5 4.2E-13 1.4E-17 120.1 13.4 93 1301-1396 2-96 (105)
8 2iwo_A Multiple PDZ domain pro 99.5 1.4E-13 4.6E-18 127.8 10.4 94 1300-1395 22-115 (120)
9 1d5g_A Human phosphatase HPTP1 99.5 6.7E-13 2.3E-17 116.2 14.2 91 1300-1393 3-93 (96)
10 2db5_A INAD-like protein; PDZ 99.5 2.9E-13 9.8E-18 125.2 12.4 94 1300-1395 23-117 (128)
11 2fe5_A Presynaptic protein SAP 99.5 8E-13 2.7E-17 115.0 13.7 89 1302-1393 3-93 (94)
12 2fne_A Multiple PDZ domain pro 99.4 2.1E-13 7.1E-18 126.1 9.9 91 1301-1394 24-114 (117)
13 1ueq_A Membrane associated gua 99.4 1.7E-12 5.9E-17 119.8 15.8 99 1292-1395 9-108 (123)
14 2jik_A Synaptojanin-2 binding 99.4 6.9E-13 2.4E-17 117.4 12.6 91 1301-1394 6-98 (101)
15 3o46_A Maguk P55 subfamily mem 99.4 7.1E-13 2.4E-17 116.1 12.5 87 1301-1394 3-89 (93)
16 3axa_A Afadin, nectin-3, prote 99.4 8.6E-13 3E-17 117.9 13.3 93 1299-1395 8-100 (106)
17 1um1_A KIAA1849 protein, RSGI 99.4 1.3E-12 4.3E-17 117.5 14.2 92 1299-1393 5-96 (110)
18 2byg_A Channel associated prot 99.4 5.6E-13 1.9E-17 122.9 12.1 91 1300-1393 22-114 (117)
19 3egg_C Spinophilin; PP1, serin 99.4 5.9E-13 2E-17 131.5 12.7 89 1301-1392 79-170 (170)
20 3cbz_A Dishevelled-2; PDZ doma 99.4 4.4E-13 1.5E-17 121.6 10.7 92 1302-1395 5-98 (108)
21 1wf8_A Neurabin-I; PDZ domain, 99.4 7.9E-13 2.7E-17 118.7 12.2 92 1301-1395 8-102 (107)
22 2i1n_A Discs, large homolog 3; 99.4 1E-12 3.5E-17 116.4 12.5 92 1301-1395 3-96 (102)
23 3gsl_A Disks large homolog 4; 99.4 2.3E-13 7.8E-18 129.4 8.1 139 1241-1394 50-191 (196)
24 2xkx_A Disks large homolog 4; 99.4 1.6E-12 5.5E-17 150.6 16.4 119 1302-1433 307-447 (721)
25 1ujd_A KIAA0559 protein; PDZ d 99.4 1.7E-12 5.9E-17 118.9 13.3 96 1299-1395 9-111 (117)
26 2kpk_A Membrane-associated gua 99.4 2.4E-12 8.4E-17 119.9 14.1 99 1292-1395 8-107 (129)
27 1kwa_A Hcask/LIN-2 protein; PD 99.4 1.4E-12 4.9E-17 114.5 11.7 85 1303-1394 2-86 (88)
28 1q7x_A PDZ2B domain of PTP-BAS 99.4 1.3E-12 4.4E-17 117.2 11.6 92 1300-1394 7-103 (108)
29 2qg1_A Multiple PDZ domain pro 99.4 2.7E-12 9.1E-17 111.7 13.1 86 1302-1393 4-89 (92)
30 1wha_A KIAA0147 protein, scrib 99.4 1.7E-12 6E-17 116.1 12.0 91 1301-1394 6-99 (105)
31 2vwr_A Ligand of NUMB protein 99.4 2.4E-12 8.3E-17 112.8 12.5 88 1302-1394 3-90 (95)
32 2o2t_A Multiple PDZ domain pro 99.4 1.1E-12 3.9E-17 119.0 10.7 92 1301-1394 19-111 (117)
33 1uju_A Scribble; PDZ domain, c 99.4 7.6E-13 2.6E-17 119.4 9.5 94 1300-1395 7-106 (111)
34 2he4_A Na(+)/H(+) exchange reg 99.4 3.3E-12 1.1E-16 110.9 13.0 86 1301-1394 3-88 (90)
35 1uhp_A Hypothetical protein KI 99.4 3E-12 1E-16 114.9 12.7 93 1300-1395 6-103 (107)
36 2q9v_A Membrane-associated gua 99.4 1.7E-12 5.8E-17 112.5 10.5 85 1303-1392 3-88 (90)
37 2dc2_A GOPC, golgi associated 99.4 2.1E-12 7E-17 116.1 11.4 91 1301-1396 8-98 (103)
38 2g5m_B Neurabin-2; spinophilin 99.4 2.3E-12 7.8E-17 116.4 11.8 92 1301-1395 3-97 (113)
39 1x6d_A Interleukin-16; PDZ dom 99.4 5.7E-12 2E-16 115.0 14.4 93 1300-1395 13-105 (119)
40 1ufx_A KIAA1526 protein; PDZ d 99.4 1.4E-12 4.9E-17 118.2 10.3 89 1303-1395 7-99 (103)
41 1n7e_A AMPA receptor interacti 99.4 6.4E-12 2.2E-16 110.8 14.1 89 1301-1395 4-92 (97)
42 1wfg_A Regulating synaptic mem 99.4 2.5E-12 8.5E-17 120.9 12.2 80 1314-1393 47-127 (131)
43 3r0h_A INAD, inactivation-NO-a 99.4 1.8E-12 6.2E-17 125.9 11.5 133 1243-1395 63-198 (206)
44 4e34_A Golgi-associated PDZ an 99.4 2.6E-12 8.9E-17 110.7 11.2 84 1302-1391 2-86 (87)
45 2cs5_A Tyrosine-protein phosph 99.4 2.2E-12 7.7E-17 117.6 11.3 94 1298-1395 11-108 (119)
46 1v62_A KIAA1719 protein; struc 99.4 3.9E-12 1.3E-16 116.9 12.9 92 1301-1396 14-105 (117)
47 1m5z_A GRIP, AMPA receptor int 99.4 6.3E-12 2.2E-16 109.1 13.5 87 1300-1392 4-90 (91)
48 1g9o_A NHE-RF; PDZ domain, com 99.4 6.5E-12 2.2E-16 109.0 13.3 83 1303-1393 4-86 (91)
49 1ihj_A INAD; intermolecular di 99.4 3.6E-12 1.2E-16 111.9 11.8 91 1301-1393 4-97 (98)
50 2i04_A Membrane-associated gua 99.4 5.7E-12 2E-16 108.2 12.7 83 1304-1391 2-85 (85)
51 2ehr_A INAD-like protein; PDZ 99.4 2.6E-12 9E-17 116.9 11.2 93 1301-1395 14-112 (117)
52 1qav_A Alpha-1 syntrophin (res 99.4 3.9E-12 1.3E-16 110.5 11.6 86 1302-1392 4-89 (90)
53 2jil_A GRIP1 protein, glutamat 99.4 4.1E-12 1.4E-16 111.4 11.9 89 1303-1394 4-93 (97)
54 3i4w_A Disks large homolog 4; 99.4 5.5E-12 1.9E-16 111.5 12.7 86 1300-1392 9-94 (104)
55 3l4f_D SH3 and multiple ankyri 99.4 4.9E-12 1.7E-16 119.3 13.1 91 1301-1394 26-125 (132)
56 3nfk_A Tyrosine-protein phosph 99.4 2.5E-12 8.7E-17 114.8 10.6 89 1299-1391 14-106 (107)
57 2r4h_A Membrane-associated gua 99.4 5.2E-12 1.8E-16 115.0 12.8 88 1300-1393 22-109 (112)
58 2daz_A INAD-like protein; PDZ 99.4 4.3E-12 1.5E-16 117.1 12.3 91 1299-1394 22-112 (124)
59 3hpk_A Protein interacting wit 99.4 5.7E-12 2E-16 116.1 12.9 87 1302-1393 19-105 (125)
60 4amh_A Disks large homolog 1; 99.4 4.7E-12 1.6E-16 114.6 12.1 79 1315-1394 13-93 (106)
61 2dkr_A LIN-7 homolog B; LIN-7B 99.4 4.9E-12 1.7E-16 109.9 11.5 85 1303-1393 6-90 (93)
62 2eno_A Synaptojanin-2-binding 99.3 5E-12 1.7E-16 115.8 12.1 92 1301-1395 16-109 (120)
63 2opg_A Multiple PDZ domain pro 99.3 1.1E-11 3.8E-16 108.9 13.5 88 1302-1394 4-91 (98)
64 1uep_A Membrane associated gua 99.3 2E-12 7E-17 115.6 8.9 89 1301-1394 8-97 (103)
65 1nf3_C PAR-6B; semi-CRIB motif 99.3 4.8E-12 1.6E-16 117.8 11.7 95 1298-1393 25-125 (128)
66 2dlu_A INAD-like protein; PDZ 99.3 7.9E-12 2.7E-16 112.5 12.3 87 1301-1395 14-100 (111)
67 1wg6_A Hypothetical protein (r 99.3 1.6E-12 5.5E-17 121.4 8.1 91 1303-1394 26-123 (127)
68 2ego_A General receptor for ph 99.3 1.2E-11 4E-16 109.2 12.9 89 1301-1392 3-95 (96)
69 2jre_A C60-1 PDZ domain peptid 99.3 9.2E-12 3.1E-16 111.4 12.4 93 1300-1393 10-104 (108)
70 2djt_A Unnamed protein product 99.3 1.1E-11 3.6E-16 110.3 12.5 90 1301-1394 10-99 (104)
71 3r68_A Na(+)/H(+) exchange reg 99.3 7.6E-12 2.6E-16 109.1 11.1 85 1302-1394 5-89 (95)
72 2uzc_A Human pdlim5, PDZ and L 99.3 1.2E-11 4.2E-16 106.7 12.3 83 1303-1393 4-86 (88)
73 2csj_A TJP2 protein; PDZ domai 99.3 6.6E-12 2.3E-16 114.5 11.0 90 1302-1395 14-106 (117)
74 2koj_A Partitioning defective 99.3 2E-11 6.8E-16 109.7 13.8 93 1301-1395 10-103 (111)
75 2v90_A PDZ domain-containing p 99.3 1.4E-11 4.8E-16 108.2 12.3 88 1303-1395 4-91 (96)
76 3qe1_A Sorting nexin-27, G pro 99.3 2E-11 6.9E-16 109.0 13.4 90 1302-1395 6-104 (107)
77 3e17_A Tight junction protein 99.3 1.1E-11 3.7E-16 109.0 11.4 81 1305-1395 3-83 (88)
78 1va8_A Maguk P55 subfamily mem 99.3 1.8E-11 6.2E-16 111.6 13.1 87 1300-1394 23-109 (113)
79 1wi2_A Riken cDNA 2700099C19; 99.3 1.7E-11 5.9E-16 109.8 12.5 86 1302-1394 15-100 (104)
80 2dm8_A INAD-like protein; PDZ 99.3 1.5E-11 5.2E-16 111.2 12.1 91 1300-1395 15-105 (116)
81 2ejy_A 55 kDa erythrocyte memb 99.3 1.3E-11 4.4E-16 112.5 11.6 83 1303-1392 13-95 (97)
82 2yt7_A Amyloid beta A4 precurs 99.3 2.4E-11 8.4E-16 108.6 13.0 92 1300-1393 7-99 (101)
83 2dmz_A INAD-like protein; PDZ 99.3 1.2E-11 4.1E-16 114.2 11.1 93 1300-1394 13-107 (129)
84 2la8_A Inactivation-NO-after-p 99.3 1.9E-11 6.6E-16 111.5 12.1 86 1302-1395 2-87 (106)
85 2f5y_A Regulator of G-protein 99.3 2.1E-11 7.2E-16 106.7 11.7 83 1302-1395 3-85 (91)
86 1uew_A Membrane associated gua 99.3 3.7E-11 1.3E-15 109.2 13.5 92 1301-1395 9-105 (114)
87 2pa1_A PDZ and LIM domain prot 99.3 2.5E-11 8.6E-16 104.9 11.9 83 1305-1393 3-85 (87)
88 2vsp_A PDZ domain-containing p 99.3 6.5E-12 2.2E-16 109.6 8.2 85 1302-1394 3-87 (91)
89 1rgw_A ZAsp protein; PDZ, cyph 99.3 1.7E-11 5.7E-16 105.0 10.5 82 1304-1393 3-84 (85)
90 3gsl_A Disks large homolog 4; 99.3 2.4E-11 8.1E-16 115.6 12.5 90 1301-1393 4-95 (196)
91 1z87_A Alpha-1-syntrophin; pro 99.3 1.1E-11 3.6E-16 130.9 10.7 95 1296-1395 71-165 (263)
92 1x5q_A LAP4 protein; PDZ domai 99.3 7E-11 2.4E-15 106.3 14.3 92 1299-1394 12-106 (110)
93 1q3o_A Shank1; PDZ, GKAP, pept 99.3 4.3E-11 1.5E-15 107.8 12.7 88 1303-1393 8-104 (109)
94 2w4f_A Protein LAP4; structura 99.3 6.6E-11 2.3E-15 103.5 13.5 88 1303-1394 4-94 (97)
95 2q3g_A PDZ and LIM domain prot 99.3 2.4E-11 8.3E-16 105.3 10.7 82 1304-1393 5-86 (89)
96 1v6b_A Harmonin isoform A1; st 99.3 2.5E-11 8.7E-16 111.9 11.4 88 1301-1393 17-107 (118)
97 2qt5_A Glutamate receptor-inte 99.3 2.9E-11 9.8E-16 117.9 12.2 138 1243-1393 51-195 (200)
98 2qkv_A Inactivation-NO-after-p 99.3 3.9E-11 1.3E-15 106.4 12.0 85 1301-1393 7-91 (96)
99 1wfv_A Membrane associated gua 99.3 9.3E-12 3.2E-16 109.9 7.8 89 1301-1395 10-98 (103)
100 2d90_A PDZ domain containing p 99.2 3.5E-11 1.2E-15 106.9 11.2 87 1301-1395 5-91 (102)
101 1mfg_A ERB-B2 interacting prot 99.2 4.5E-11 1.5E-15 104.8 11.7 84 1304-1393 5-93 (95)
102 1tp5_A Presynaptic density pro 99.2 4.8E-11 1.6E-15 108.6 12.3 87 1300-1393 12-98 (119)
103 3tsz_A Tight junction protein 99.2 2.5E-11 8.4E-16 132.9 12.3 121 1301-1436 8-129 (391)
104 2kv8_A RGS12, regulator of G-p 99.2 1.1E-11 3.8E-16 106.2 7.3 81 1302-1393 2-82 (83)
105 3r0h_A INAD, inactivation-NO-a 99.2 8.4E-11 2.9E-15 114.2 14.3 94 1299-1395 15-110 (206)
106 2kom_A Partitioning defective 99.2 8.8E-11 3E-15 108.7 13.6 91 1301-1393 29-120 (121)
107 2h2b_A Tight junction protein 99.2 6.7E-11 2.3E-15 105.7 12.1 90 1301-1394 6-98 (107)
108 3soe_A Membrane-associated gua 99.2 5.2E-11 1.8E-15 112.7 11.9 85 1301-1396 11-96 (113)
109 2iwn_A Multiple PDZ domain pro 99.2 8.7E-11 3E-15 101.9 12.0 89 1302-1393 4-93 (97)
110 3k1r_A Harmonin; protein-prote 99.2 4.1E-11 1.4E-15 118.0 11.2 87 1301-1394 83-169 (192)
111 2e7k_A Maguk P55 subfamily mem 99.2 2.7E-11 9.1E-16 107.1 8.9 84 1301-1393 5-88 (91)
112 2eei_A PDZ domain-containing p 99.2 4.7E-11 1.6E-15 106.5 10.5 87 1301-1395 7-93 (106)
113 3ngh_A PDZ domain-containing p 99.2 5.9E-11 2E-15 105.8 11.1 84 1303-1393 2-85 (106)
114 2fcf_A Multiple PDZ domain pro 99.2 9.3E-11 3.2E-15 103.8 12.2 89 1304-1394 6-100 (103)
115 1n7t_A 99-MER peptide of densi 99.2 5.1E-11 1.8E-15 106.0 10.6 86 1302-1393 11-101 (103)
116 3sfj_A TAX1-binding protein 3; 99.2 9E-11 3.1E-15 104.1 12.0 88 1304-1392 6-104 (104)
117 1v5q_A GRIP1 homolog, glutamat 99.2 1E-10 3.4E-15 107.9 12.6 95 1300-1395 13-109 (122)
118 2dls_A PDZ-rhogef, RHO guanine 99.2 1.3E-10 4.4E-15 102.3 12.6 83 1301-1395 7-89 (93)
119 1um7_A Synapse-associated prot 99.2 3.6E-11 1.2E-15 107.7 9.2 88 1299-1393 12-99 (113)
120 3shw_A Tight junction protein 99.2 2.4E-11 8.2E-16 136.9 10.0 118 1303-1436 2-121 (468)
121 2gzv_A PRKCA-binding protein; 99.2 1.7E-10 5.8E-15 106.3 13.7 87 1302-1393 24-110 (114)
122 2jxo_A Ezrin-radixin-moesin-bi 99.2 8.8E-11 3E-15 103.4 11.3 83 1303-1392 10-92 (98)
123 2xkx_A Disks large homolog 4; 99.2 3.9E-11 1.3E-15 139.1 11.6 143 1238-1395 101-246 (721)
124 1wf7_A Enigma homologue protei 99.2 8.7E-11 3E-15 104.8 11.1 87 1301-1395 4-90 (103)
125 1uez_A KIAA1526 protein; PDZ d 99.2 5.4E-11 1.8E-15 105.6 9.5 89 1300-1394 6-94 (101)
126 2pkt_A PDZ and LIM domain prot 99.2 1.2E-10 4.2E-15 101.3 11.4 83 1304-1394 5-87 (91)
127 2eeg_A PDZ and LIM domain prot 99.2 7.8E-11 2.7E-15 103.6 10.1 83 1303-1393 9-91 (94)
128 2iwq_A Multiple PDZ domain pro 99.2 1.7E-10 5.8E-15 107.7 12.8 89 1304-1394 26-120 (123)
129 3bpu_A Membrane-associated gua 99.2 1.2E-10 3.9E-15 100.9 10.4 83 1302-1393 3-86 (88)
130 1qau_A Neuronal nitric oxide s 99.2 2.4E-10 8.2E-15 102.8 12.9 88 1303-1395 2-89 (112)
131 2eeh_A PDZ domain-containing p 99.2 2.3E-10 8E-15 101.6 12.5 88 1301-1395 9-96 (100)
132 3khf_A Microtubule-associated 99.2 1.9E-10 6.6E-15 101.4 11.5 86 1305-1394 5-94 (99)
133 2vz5_A TAX1-binding protein 3; 99.1 3E-10 1E-14 108.2 12.7 95 1300-1395 21-126 (139)
134 1ujv_A Membrane associated gua 99.1 4.8E-10 1.6E-14 100.1 12.9 84 1300-1394 8-92 (96)
135 2yuy_A RHO GTPase activating p 99.1 3.9E-11 1.3E-15 111.2 5.8 89 1303-1395 9-122 (126)
136 2edp_A Fragment, shroom family 99.1 1.1E-10 3.7E-15 104.3 8.5 89 1300-1394 7-95 (100)
137 2vsv_A Rhophilin-2; scaffold p 99.1 2.2E-10 7.6E-15 106.3 10.8 81 1304-1394 25-105 (109)
138 1p1d_A PDZ45, glutamate recept 99.1 3.9E-10 1.3E-14 110.2 12.8 95 1300-1395 4-100 (196)
139 2kjd_A Sodium/hydrogen exchang 99.1 3.8E-10 1.3E-14 103.6 11.8 86 1301-1393 8-93 (128)
140 1vb7_A PDZ and LIM domain 2; P 99.1 1.7E-10 5.7E-15 101.5 9.1 83 1306-1394 8-90 (94)
141 1uit_A Human discs large 5 pro 99.1 4E-10 1.4E-14 102.6 11.8 86 1301-1395 18-103 (117)
142 2z17_A Pleckstrin homology SEC 99.1 3.5E-10 1.2E-14 101.1 10.7 83 1304-1389 17-103 (104)
143 1b8q_A Protein (neuronal nitri 99.1 2.5E-10 8.7E-15 105.2 9.6 91 1300-1395 6-96 (127)
144 1whd_A RGS3, regulator of G-pr 99.1 2.7E-10 9.3E-15 101.6 9.4 83 1301-1394 14-96 (100)
145 2qbw_A PDZ-fibronectin fusion 99.1 3.5E-10 1.2E-14 109.3 10.9 74 1315-1391 2-80 (195)
146 1p1d_A PDZ45, glutamate recept 99.1 2.8E-10 9.7E-15 111.1 10.0 142 1241-1393 51-195 (196)
147 2qt5_A Glutamate receptor-inte 99.1 7.3E-10 2.5E-14 108.0 12.3 87 1302-1393 7-93 (200)
148 1wif_A RSGI RUH-020, riken cDN 99.1 3.4E-10 1.2E-14 108.0 9.3 84 1301-1392 26-110 (126)
149 2edv_A FERM and PDZ domain-con 99.1 1.5E-10 5.1E-15 102.9 6.3 83 1301-1393 7-89 (96)
150 2edz_A PDZ domain-containing p 99.1 6.5E-10 2.2E-14 101.1 10.5 84 1303-1393 14-97 (114)
151 1y7n_A Amyloid beta A4 precurs 99.1 1.4E-09 4.8E-14 97.0 12.2 77 1304-1392 13-89 (90)
152 3tsv_A Tight junction protein 99.0 1.3E-09 4.5E-14 101.9 12.1 83 1302-1393 29-112 (124)
153 1x5n_A Harmonin; PDZ domain, u 99.0 1.1E-09 3.6E-14 99.1 10.9 84 1302-1392 15-98 (114)
154 2lob_A Golgi-associated PDZ an 98.6 2.3E-11 8E-16 112.1 0.0 83 1302-1390 27-110 (112)
155 3cyy_A Tight junction protein 99.0 2.4E-09 8.4E-14 92.6 12.3 82 1303-1394 3-84 (92)
156 2d8i_A T-cell lymphoma invasio 99.0 1.2E-09 4.2E-14 101.8 10.8 92 1298-1395 11-103 (114)
157 1vae_A Rhophilin 2, rhophilin, 99.0 3.6E-10 1.2E-14 104.3 6.8 82 1304-1395 17-98 (111)
158 1v5l_A PDZ and LIM domain 3; a 99.0 3.4E-10 1.2E-14 101.2 6.0 84 1304-1395 7-90 (103)
159 1uf1_A KIAA1526 protein; PDZ d 99.0 6.7E-09 2.3E-13 96.1 14.4 87 1302-1395 20-106 (128)
160 3kzd_A TIAM-1, T-lymphoma inva 99.0 3E-09 1E-13 97.9 11.4 85 1301-1391 5-90 (94)
161 2rcz_A Tight junction protein 99.0 6E-09 2.1E-13 87.5 12.1 69 1314-1392 12-80 (81)
162 1wh1_A KIAA1095 protein; PDZ d 98.9 4.3E-09 1.5E-13 97.4 11.0 93 1300-1395 17-109 (124)
163 1w9e_A Syntenin 1; cell adhesi 98.9 9.8E-09 3.4E-13 98.2 12.5 83 1302-1392 4-86 (166)
164 2eaq_A LIM domain only protein 98.9 7.4E-09 2.5E-13 89.7 10.2 82 1304-1392 5-88 (90)
165 2krg_A Na(+)/H(+) exchange reg 98.8 2.9E-09 1E-13 109.1 7.3 84 1301-1392 8-92 (216)
166 3suz_A Amyloid beta A4 precurs 98.8 5.1E-10 1.7E-14 121.9 1.1 128 1238-1393 244-374 (388)
167 3suz_A Amyloid beta A4 precurs 98.8 2.6E-09 8.9E-14 116.3 6.0 93 1300-1394 202-295 (388)
168 3qik_A Phosphatidylinositol 3, 98.7 7.3E-08 2.5E-12 90.7 11.0 80 1304-1392 19-100 (101)
169 2yub_A LIMK-2, LIM domain kina 98.7 7.3E-08 2.5E-12 90.0 10.8 90 1303-1395 16-107 (118)
170 1w9e_A Syntenin 1; cell adhesi 98.5 2.6E-07 8.9E-12 88.4 9.0 122 1241-1391 42-164 (166)
171 3rle_A Golgi reassembly-stacki 98.2 8.9E-07 3.1E-11 88.5 6.1 138 1238-1394 28-171 (209)
172 4a8c_A Periplasmic PH-dependen 98.2 5.2E-06 1.8E-10 91.6 11.4 59 1332-1394 363-421 (436)
173 1fc6_A Photosystem II D1 prote 98.1 1E-05 3.4E-10 87.7 10.9 76 1315-1394 85-160 (388)
174 2pzd_A Serine protease HTRA2; 98.0 2E-05 7E-10 71.1 8.3 57 1332-1393 35-91 (113)
175 2kjp_A Uncharacterized protein 97.9 1.3E-05 4.4E-10 71.8 5.6 58 1333-1394 2-60 (91)
176 3i18_A LMO2051 protein; alpha- 97.9 4.2E-05 1.4E-09 68.6 8.9 59 1332-1394 7-66 (100)
177 2zpm_A Regulator of sigma E pr 97.9 2E-05 6.7E-10 68.4 6.3 58 1333-1393 5-62 (91)
178 2kl1_A YLBL protein; structure 97.8 2.1E-05 7.2E-10 70.2 6.0 59 1332-1394 5-64 (94)
179 3pv2_A DEGQ; trypsin fold, PDZ 97.8 3.5E-05 1.2E-09 85.8 8.9 58 1332-1393 386-443 (451)
180 3id1_A Regulator of sigma E pr 97.8 5E-05 1.7E-09 68.1 8.1 58 1334-1394 4-62 (95)
181 3rle_A Golgi reassembly-stacki 97.8 3E-05 1E-09 77.7 7.0 73 1316-1393 3-76 (209)
182 2l97_A HTRA, putative serine p 97.8 6.5E-05 2.2E-09 71.0 8.7 59 1332-1394 57-116 (134)
183 2p3w_A Probable serine proteas 97.7 8.3E-05 2.8E-09 67.3 8.3 57 1332-1393 35-91 (112)
184 2i6v_A General secretion pathw 97.7 5.7E-05 2E-09 66.1 6.7 58 1333-1393 20-78 (87)
185 3k50_A Putative S41 protease; 97.6 7.7E-05 2.6E-09 82.8 6.8 74 1315-1394 74-147 (403)
186 1y8t_A Hypothetical protein RV 97.5 0.00029 1E-08 74.1 10.5 71 1316-1393 230-302 (324)
187 4fgm_A Aminopeptidase N family 97.5 0.00015 5.2E-09 83.9 8.2 71 1315-1395 485-556 (597)
188 1te0_A Protease DEGS; two doma 97.5 0.00022 7.6E-09 75.1 8.7 60 1332-1394 244-304 (318)
189 1ky9_A Protease DO, DEGP, HTRA 97.5 3.3E-05 1.1E-09 86.0 2.5 70 1317-1394 372-441 (448)
190 3stj_A Protease DEGQ; serine p 97.4 0.00031 1E-08 75.8 8.6 61 1332-1395 263-324 (345)
191 2i4s_A General secretion pathw 97.4 0.0003 1E-08 63.6 6.7 58 1333-1393 38-96 (105)
192 1lcy_A HTRA2 serine protease; 97.3 0.00049 1.7E-08 73.0 8.4 58 1332-1394 256-313 (325)
193 2hga_A Conserved protein MTH13 97.3 0.00083 2.8E-08 63.7 8.8 58 1332-1394 25-83 (125)
194 4a8c_A Periplasmic PH-dependen 97.1 0.00058 2E-08 75.5 7.5 61 1332-1395 263-324 (436)
195 1k32_A Tricorn protease; prote 97.1 0.00094 3.2E-08 78.4 9.1 70 1315-1393 737-815 (1045)
196 3pv2_A DEGQ; trypsin fold, PDZ 97.1 0.0011 3.8E-08 74.0 8.9 61 1332-1395 282-343 (451)
197 3qo6_A Protease DO-like 1, chl 97.1 0.00098 3.4E-08 71.4 8.1 61 1332-1395 251-323 (348)
198 3num_A Serine protease HTRA1; 96.7 0.00025 8.6E-09 75.1 0.0 59 1332-1395 254-312 (332)
199 1ky9_A Protease DO, DEGP, HTRA 96.4 0.002 6.9E-08 71.9 4.4 60 1332-1394 286-346 (448)
200 4fln_A Protease DO-like 2, chl 94.1 0.085 2.9E-06 61.2 8.1 58 1331-1391 414-471 (539)
201 4fln_A Protease DO-like 2, chl 93.7 0.089 3E-06 61.0 7.2 62 1332-1395 277-347 (539)
202 1r6j_A Syntenin 1; PDZ, membra 27.8 8.1 0.00028 34.7 -1.2 41 1240-1282 37-77 (82)
203 3gge_A PDZ domain-containing p 27.3 12 0.00041 35.1 -0.2 37 1238-1276 41-77 (95)
204 4amh_A Disks large homolog 1; 21.2 43 0.0015 30.1 2.1 37 1241-1279 47-84 (106)
No 1
>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=99.51 E-value=6.9e-14 Score=130.73 Aligned_cols=94 Identities=33% Similarity=0.494 Sum_probs=82.0
Q ss_pred CCCceEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHh
Q psy6070 1299 CEPTLVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFK 1378 (1454)
Q Consensus 1299 ~ppEIRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLK 1378 (1454)
.+.+++.|+|.|+. .||||+|.++.+.+.+..+++|..|.+||+|+++|.|++||+|++|||+++.+++|++++.+|+
T Consensus 26 ~~~~~~~v~l~k~~--~glG~~i~gg~~~~~~~~~i~I~~V~~gs~A~~aggL~~GD~Il~Vng~~v~~~~~~~~~~~l~ 103 (130)
T 1i16_A 26 AEATVCTVTLEKMS--AGLGFSLEGGKGSLHGDKPLTINRIFKGAASEQSETVQPGDEILQLGGTAMQGLTRFEAWNIIK 103 (130)
T ss_dssp SSEEEEEEEEETTS--SSTTEEEECCCCCSSSCCCCEEEEECSSCCCSSSCCCCTTCCEEECSSCBGGGSCHHHHHHHHH
T ss_pred CCCcEEEEEEEcCC--CccCEEEecCcCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 34677899999976 6999999998875444568999999999999999559999999999999999999999999999
Q ss_pred cCCCCeEEEEEEcCCC
Q psy6070 1379 KTKQGLVELVLQPNTT 1394 (1454)
Q Consensus 1379 qSGqGSVsLVVrR~ks 1394 (1454)
..+...|.|+|.|...
T Consensus 104 ~~~~~~v~l~v~r~~~ 119 (130)
T 1i16_A 104 ALPDGPVTIVIRRKSL 119 (130)
T ss_dssp TSCSSEEEEEEEEESS
T ss_pred hCCCceEEEEEEeCCC
Confidence 9975679999988643
No 2
>3b76_A E3 ubiquitin-protein ligase LNX; PDZ, bound ligand, structural genomics, structural genomics consortium, SGC, metal-binding; 1.75A {Homo sapiens}
Probab=99.50 E-value=1e-13 Score=129.12 Aligned_cols=91 Identities=25% Similarity=0.422 Sum_probs=80.9
Q ss_pred CceEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcC
Q psy6070 1301 PTLVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKT 1380 (1454)
Q Consensus 1301 pEIRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqS 1380 (1454)
...+.|.|.|+++ .+|||+|.+|.+...+..+++|..|.+||+|+++|+|++||+|++|||+++.++++++++.+|+..
T Consensus 23 ~~~~~v~l~k~~~-~~lGf~i~gg~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~ 101 (118)
T 3b76_A 23 MHEKVVNIQKDPG-ESLGMTVAGGASHREWDLPIYVISVEPGGVISRDGRIKTGDILLNVDGVELTEVSRSEAVALLKRT 101 (118)
T ss_dssp EEEEEEEEECCTT-CCCCEEEEECSCSTTCCCCEEEEEECTTSHHHHHCSSCTTCEEEEETTEEGGGSCHHHHHHHHHSC
T ss_pred CCcEEEEEEeCCC-CccCEEEecCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 4457899998863 799999999976544566899999999999999999999999999999999999999999999998
Q ss_pred CCCeEEEEEEcCC
Q psy6070 1381 KQGLVELVLQPNT 1393 (1454)
Q Consensus 1381 GqGSVsLVVrR~k 1393 (1454)
+ ..|.|+|.|..
T Consensus 102 ~-~~v~L~v~R~~ 113 (118)
T 3b76_A 102 S-SSIVLKALEVK 113 (118)
T ss_dssp C-SEEEEEEEEEE
T ss_pred C-CeEEEEEEECC
Confidence 6 78999998753
No 3
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.49 E-value=2.6e-13 Score=123.83 Aligned_cols=93 Identities=23% Similarity=0.472 Sum_probs=81.2
Q ss_pred CCCCceEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHH
Q psy6070 1298 TCEPTLVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIF 1377 (1454)
Q Consensus 1298 s~ppEIRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLL 1377 (1454)
..+++++.|+|.|+ .+|||+|.|+.+... ..+++|..|.+||+|+++|+|++||+|++|||+++.+++|++++++|
T Consensus 11 ~~~~~~~~v~l~k~---~glG~~i~gg~~~~~-~~~~~V~~v~~~s~A~~aG~l~~GD~Il~Vng~~~~~~~~~~~~~~l 86 (109)
T 1wi4_A 11 DRDPAFRVITVTKE---TGLGLKILGGINRNE-GPLVYIHEVIPGGDCYKDGRLKPGDQLVSINKESMIGVSFEEAKSII 86 (109)
T ss_dssp CCCTTEEEEEECCS---SCCCEEEEECSSSSS-CSSEEEEEECTTSHHHHHCSCCTTCBEEEETTSCCTTCCHHHHHHHH
T ss_pred CCCCcEEEEEEeCC---CccCEEEEeccCCCC-CCCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 34567899999885 489999999876533 23799999999999999999999999999999999999999999999
Q ss_pred hcCC---CCeEEEEEEcCCC
Q psy6070 1378 KKTK---QGLVELVLQPNTT 1394 (1454)
Q Consensus 1378 KqSG---qGSVsLVVrR~ks 1394 (1454)
+.+. +..+.|.|.|...
T Consensus 87 ~~~~~r~~~~~~l~v~R~~~ 106 (109)
T 1wi4_A 87 TRAKLRSESPWEIAFIRSGP 106 (109)
T ss_dssp HHSCCSSSSCEEEEEECCCC
T ss_pred HccccCCCceEEEEEEeCCC
Confidence 9987 6789999988653
No 4
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=99.49 E-value=1.5e-13 Score=127.47 Aligned_cols=87 Identities=24% Similarity=0.240 Sum_probs=76.0
Q ss_pred CceEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcC
Q psy6070 1301 PTLVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKT 1380 (1454)
Q Consensus 1301 pEIRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqS 1380 (1454)
.+.+.|.|.|.. ++|||+|.++.. ..+||++|.+||+|+++|+|++||+|++|||+++.|++|.|++++||..
T Consensus 4 g~~k~V~l~K~~--~~LG~tI~~~g~-----g~~~I~rI~~gg~a~r~g~L~vGD~I~~VNG~~v~g~~h~evv~lLk~~ 76 (95)
T 3gge_A 4 GIEKEVNVYKSE--DSLGLTITDNGV-----GYAFIKRIKDGGVIDSVKTICVGDHIESINGENIVGWRHYDVAKKLKEL 76 (95)
T ss_dssp EEEEEEEEECCS--SCCCEEEECSSS-----SCCEEEEECTTSHHHHCTTCCTTCEEEEETTEECTTCCHHHHHHHHHHS
T ss_pred CeEEEEEEEECC--CCceEEEEcCCC-----CcEEEEEEcCCChHHhcCCCCCCCEEEEECCEEccCCCHHHHHHHHHhC
Confidence 456899999987 799999997421 2589999999999999999999999999999999999999999999997
Q ss_pred CC-CeEEEEEEcCCC
Q psy6070 1381 KQ-GLVELVLQPNTT 1394 (1454)
Q Consensus 1381 Gq-GSVsLVVrR~ks 1394 (1454)
+. ..++|++.++..
T Consensus 77 ~~g~~~~L~lv~p~~ 91 (95)
T 3gge_A 77 KKEELFTMKLIEPKK 91 (95)
T ss_dssp CTTCEEEEEEEEECS
T ss_pred CCCCEEEEEEECccc
Confidence 63 478888877643
No 5
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.49 E-value=2e-13 Score=123.31 Aligned_cols=91 Identities=32% Similarity=0.426 Sum_probs=79.9
Q ss_pred CceEEEEEEeCCCCCcccEEEEeccCCC-CCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhc
Q psy6070 1301 PTLVRVSFEKGPGKKSLGFSIVGGVDSP-KGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKK 1379 (1454)
Q Consensus 1301 pEIRTVrLqKGpG~EGLGFSIRGGkDQP-~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKq 1379 (1454)
.+++.|.|.|++ .+|||+|.++.+.. ....+++|..|.+||||+++|+|++||+|++|||+++.+++|++++.+|+.
T Consensus 14 ~~~~~v~l~k~~--~glG~~i~~~~~~~~~~~~g~~V~~v~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 91 (108)
T 2d92_A 14 PEVKIVELVKDC--KGLGFSILDYQDPLDPTRSVIVIRSLVADGVAERSGGLLPGDRLVSVNEYCLDNTSLAEAVEILKA 91 (108)
T ss_dssp SSCEEEEEEECS--SCCSEEEEEEECSSCTTCEEEEEEEECTTCHHHHHTCCCTTCEEEEESSCBCTTCCHHHHHHHHHH
T ss_pred CceEEEEEEECC--CccCEEEecccccCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 456899999997 69999999976531 134689999999999999999999999999999999999999999999999
Q ss_pred CCCCeEEEEEEcCC
Q psy6070 1380 TKQGLVELVLQPNT 1393 (1454)
Q Consensus 1380 SGqGSVsLVVrR~k 1393 (1454)
.+.+.|.|+|.|..
T Consensus 92 ~~~~~v~l~v~R~~ 105 (108)
T 2d92_A 92 VPPGLVHLGICSGP 105 (108)
T ss_dssp SCSEEEEEEEECCC
T ss_pred CCCCeEEEEEEcCC
Confidence 75468999998864
No 6
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=99.47 E-value=1.9e-13 Score=122.39 Aligned_cols=78 Identities=19% Similarity=0.353 Sum_probs=70.0
Q ss_pred ceEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcCC
Q psy6070 1302 TLVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKTK 1381 (1454)
Q Consensus 1302 EIRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqSG 1381 (1454)
..+.|+|.|++. ++|||++++| +|..|.+||||+++| |+.||+|++|||+++.+++|++++++||.++
T Consensus 4 ~~r~v~l~k~~~-g~~Gf~i~~g----------~I~~v~~gspA~~aG-l~~GD~Il~VNG~~v~~~~~~evv~llr~~g 71 (82)
T 1r6j_A 4 DPRTITMHKDST-GHVGFIFKNG----------KITSIVKDSSAARNG-LLTEHNICEINGQNVIGLKDSQIADILSTSG 71 (82)
T ss_dssp CCEEEEEECCTT-SCCCEEEETT----------EEEEECTTSHHHHHT-CCSSEEEEEETTEECTTCCHHHHHHHHHHSC
T ss_pred ceEEEEEEECCC-CCeEEEEECC----------EEEEecCCCHHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHHhcCC
Confidence 357899999973 6799999875 378999999999999 9999999999999999999999999999876
Q ss_pred CCeEEEEEEcC
Q psy6070 1382 QGLVELVLQPN 1392 (1454)
Q Consensus 1382 qGSVsLVVrR~ 1392 (1454)
+.|+|+|.+.
T Consensus 72 -~~V~L~v~p~ 81 (82)
T 1r6j_A 72 -TVVTITIMPA 81 (82)
T ss_dssp -SEEEEEEEEC
T ss_pred -CEEEEEEEeC
Confidence 8999998763
No 7
>2awx_A Synapse associated protein 97; membrane protein, synaptic signaling, trafficking protein; HET: HIS; 1.80A {Rattus norvegicus} PDB: 2g2l_A 2awu_A 2aww_A 3rl8_A
Probab=99.47 E-value=4.2e-13 Score=120.08 Aligned_cols=93 Identities=38% Similarity=0.585 Sum_probs=80.8
Q ss_pred CceEEEEEEeCCCCCcccEEEEeccCCC--CCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHh
Q psy6070 1301 PTLVRVSFEKGPGKKSLGFSIVGGVDSP--KGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFK 1378 (1454)
Q Consensus 1301 pEIRTVrLqKGpG~EGLGFSIRGGkDQP--~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLK 1378 (1454)
+.++.|+|.|++ .+|||+|.++.+.. .+..+++|..|.+||||+++|+|++||+|++|||+.+.++++.+++.+++
T Consensus 2 e~~~~v~l~k~~--~glG~~i~gg~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~ 79 (105)
T 2awx_A 2 EKIMEIKLIKGP--KGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNSVSLEEVTHEEAVTALK 79 (105)
T ss_dssp -CEEEEEEECBT--TBSSEEEEECBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHH
T ss_pred CeEEEEEEEECC--CCCCEEEeCccCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 467899999987 69999999987642 23458999999999999999999999999999999999999999999999
Q ss_pred cCCCCeEEEEEEcCCCCC
Q psy6070 1379 KTKQGLVELVLQPNTTEA 1396 (1454)
Q Consensus 1379 qSGqGSVsLVVrR~kses 1396 (1454)
..+ ..|.|+|.|.....
T Consensus 80 ~~~-~~v~l~v~R~~~~~ 96 (105)
T 2awx_A 80 NTS-DFVYLKVAKPTSMY 96 (105)
T ss_dssp SCC-SEEEEEEECCCC--
T ss_pred cCC-CeEEEEEEcCCCCC
Confidence 886 79999999976543
No 8
>2iwo_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP-1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.7A {Homo sapiens} PDB: 2iwp_A
Probab=99.47 E-value=1.4e-13 Score=127.80 Aligned_cols=94 Identities=35% Similarity=0.591 Sum_probs=77.5
Q ss_pred CCceEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhc
Q psy6070 1300 EPTLVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKK 1379 (1454)
Q Consensus 1300 ppEIRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKq 1379 (1454)
+..++.|.|.|+++ .+|||+|.+|.+...+..+++|..|.+||||+++|.|++||+|++|||+++.+++|++++.+|+.
T Consensus 22 ~~~~~~v~l~k~~~-~~lGf~i~gg~~~~~~~~~~~V~~V~~~spA~~aggL~~GD~Il~VnG~~v~~~~~~~~~~~l~~ 100 (120)
T 2iwo_A 22 SMGLRTVEMKKGPT-DSLGISIAGGVGSPLGDVPIFIAMMHPTGVAAQTQKLRVGDRIVTICGTSTEGMTHTQAVNLLKN 100 (120)
T ss_dssp ---CEEEEEEC-----CCCEEEEEEEEETTEEEEEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCBHHHHHHHHHH
T ss_pred CCCcEEEEEEcCCC-CCCCEEEecccCCCCCCCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 45678999999873 69999999987643334589999999999999995599999999999999999999999999999
Q ss_pred CCCCeEEEEEEcCCCC
Q psy6070 1380 TKQGLVELVLQPNTTE 1395 (1454)
Q Consensus 1380 SGqGSVsLVVrR~kse 1395 (1454)
.+ +.|.|+|.|....
T Consensus 101 ~~-~~v~l~v~r~g~~ 115 (120)
T 2iwo_A 101 AS-GSIEMQVVAGGDV 115 (120)
T ss_dssp CC-SEEEEEEECCTTS
T ss_pred CC-CeEEEEEEECCcc
Confidence 97 7899999987543
No 9
>1d5g_A Human phosphatase HPTP1E; protein-peptide complex, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 3lnx_A 3lny_A 3pdz_A 1vj6_A 1gm1_A 1ozi_A
Probab=99.47 E-value=6.7e-13 Score=116.22 Aligned_cols=91 Identities=33% Similarity=0.607 Sum_probs=80.8
Q ss_pred CCceEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhc
Q psy6070 1300 EPTLVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKK 1379 (1454)
Q Consensus 1300 ppEIRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKq 1379 (1454)
+.+.++|.|.|+. .+|||+|.++.+......+++|..|.+||||+++|+|++||+|++|||+.+.++++++++.+|+.
T Consensus 3 ~g~~~~v~l~k~~--~~lG~~i~~g~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~ 80 (96)
T 1d5g_A 3 PGDIFEVELAKND--NSLGISVTGGVNTSVRHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRN 80 (96)
T ss_dssp TTCEEEEEEECSS--SSCCEEEECCSSSCSSSSCCEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHHS
T ss_pred CCCEEEEEEEeCC--CCCCEEEECCCCCCCCcCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 3567899999986 79999999987654445689999999999999999999999999999999999999999999998
Q ss_pred CCCCeEEEEEEcCC
Q psy6070 1380 TKQGLVELVLQPNT 1393 (1454)
Q Consensus 1380 SGqGSVsLVVrR~k 1393 (1454)
.+ ..|.|+|.|..
T Consensus 81 ~g-~~v~l~v~R~~ 93 (96)
T 1d5g_A 81 TG-QVVHLLLEKGQ 93 (96)
T ss_dssp CC-SEEEEEEECCS
T ss_pred CC-CeEEEEEEcCC
Confidence 75 79999998854
No 10
>2db5_A INAD-like protein; PDZ domain, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ, structural genomics; NMR {Homo sapiens}
Probab=99.47 E-value=2.9e-13 Score=125.16 Aligned_cols=94 Identities=29% Similarity=0.476 Sum_probs=82.9
Q ss_pred CCceEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCC-CCCHHHHHHHHh
Q psy6070 1300 EPTLVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQ-GRTHAEAITIFK 1378 (1454)
Q Consensus 1300 ppEIRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVE-GLTHEEAVSLLK 1378 (1454)
...++.|.|.|+.. .+|||+|.++.+...+..+++|..|.+||||+++|+|++||+|++|||+.+. +++|++++.+|+
T Consensus 23 ~~~~~~v~l~k~~~-~~lG~~i~g~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~~l~ 101 (128)
T 2db5_A 23 GRQIEYIDIERPST-GGLGFSVVALRSQNLGKVDIFVKDVQPGSVADRDQRLKENDQILAINHTPLDQNISHQQAIALLQ 101 (128)
T ss_dssp TCEEEEEEEECCSS-SCCCCEEEEEECSSSSCEEEEEECCCTTSHHHHTCCCCSSCBEEEESSCBCSTTSCHHHHHHHHH
T ss_pred cCceEEEEEEECCC-CccCEEEecccCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCCHHHHHHHHH
Confidence 34678999999873 7999999998766544568999999999999999999999999999999997 999999999999
Q ss_pred cCCCCeEEEEEEcCCCC
Q psy6070 1379 KTKQGLVELVLQPNTTE 1395 (1454)
Q Consensus 1379 qSGqGSVsLVVrR~kse 1395 (1454)
..+ ..|.|+|.|....
T Consensus 102 ~~~-~~v~l~v~r~~~~ 117 (128)
T 2db5_A 102 QTT-GSLRLIVAREPVH 117 (128)
T ss_dssp HCC-SEEEEEEEECCCS
T ss_pred cCC-CeEEEEEEcCCCC
Confidence 976 7999999987544
No 11
>2fe5_A Presynaptic protein SAP102; PDZ domain, DLG3, human, structural genomics, structural GEN consortium, SGC, structural protein; HET: GOL; 1.10A {Homo sapiens} SCOP: b.36.1.1 PDB: 2x7z_A 2oqs_A 1qlc_A 2i0l_A
Probab=99.46 E-value=8e-13 Score=115.02 Aligned_cols=89 Identities=38% Similarity=0.621 Sum_probs=79.0
Q ss_pred ceEEEEEEeCCCCCcccEEEEeccCCC--CCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhc
Q psy6070 1302 TLVRVSFEKGPGKKSLGFSIVGGVDSP--KGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKK 1379 (1454)
Q Consensus 1302 EIRTVrLqKGpG~EGLGFSIRGGkDQP--~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKq 1379 (1454)
++++|+|.|++ .+|||+|.++.+.+ .+..+++|..|.+||||+++|+|++||+|++|||+.+.++++.+++.+++.
T Consensus 3 ~~~~v~l~k~~--~g~G~~i~gg~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~ 80 (94)
T 2fe5_A 3 TIMEVNLLKGP--KGLGFSIAGGIGNQHIPGDNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKN 80 (94)
T ss_dssp CEEEEEEECCT--TCSCEEEEECBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHHT
T ss_pred EEEEEEEEECC--CCCCEEEEcccCCCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 56889999987 68999999987653 234589999999999999999999999999999999999999999999998
Q ss_pred CCCCeEEEEEEcCC
Q psy6070 1380 TKQGLVELVLQPNT 1393 (1454)
Q Consensus 1380 SGqGSVsLVVrR~k 1393 (1454)
.+ ..|.|+|.|..
T Consensus 81 ~~-~~v~l~v~R~g 93 (94)
T 2fe5_A 81 TS-DMVYLKVAKPG 93 (94)
T ss_dssp CC-SEEEEEEECCC
T ss_pred CC-CeEEEEEEcCC
Confidence 86 69999998753
No 12
>2fne_A Multiple PDZ domain protein; structural protein, structural genomics, SGC, structural genomics consortium, unknown function; 1.83A {Homo sapiens} SCOP: b.36.1.1
Probab=99.45 E-value=2.1e-13 Score=126.05 Aligned_cols=91 Identities=46% Similarity=0.840 Sum_probs=80.8
Q ss_pred CceEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcC
Q psy6070 1301 PTLVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKT 1380 (1454)
Q Consensus 1301 pEIRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqS 1380 (1454)
++.+.|+|.|+. .+|||+|.++.+.+.+..+++|..|.+||||+++|+|++||+|++|||+++.++++++++.+|+..
T Consensus 24 ~~~~~v~L~k~~--~glGf~l~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~ 101 (117)
T 2fne_A 24 PQCKSITLERGP--DGLGFSIVGGYGSPHGDLPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEEAVAILKRT 101 (117)
T ss_dssp CEEEEEEECCBT--TBTSEEEEEEEEETTEEEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHC
T ss_pred CccEEEEEEeCC--CcccEEEecccCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 467899999987 689999999876544445899999999999999999999999999999999999999999999998
Q ss_pred CCCeEEEEEEcCCC
Q psy6070 1381 KQGLVELVLQPNTT 1394 (1454)
Q Consensus 1381 GqGSVsLVVrR~ks 1394 (1454)
+ +.|.|+|.|...
T Consensus 102 ~-~~v~l~v~R~g~ 114 (117)
T 2fne_A 102 K-GTVTLMVLSSDE 114 (117)
T ss_dssp C-SSEEEEEEECSC
T ss_pred C-CeEEEEEEeCCc
Confidence 7 679999988653
No 13
>1ueq_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.45 E-value=1.7e-12 Score=119.82 Aligned_cols=99 Identities=28% Similarity=0.488 Sum_probs=84.6
Q ss_pred cCCCCCCCCCceEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHH
Q psy6070 1292 FRSRPQTCEPTLVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHA 1371 (1454)
Q Consensus 1292 LPSRPrs~ppEIRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHE 1371 (1454)
+...+.....+.+.|+|.|+. .+|||+|.++.+. ..+++|..|.+||+|+++|+|++||+|++|||+.+.+++++
T Consensus 9 ~~~~~~~~~~~~~~v~l~~~~--~glG~~~~~g~~~---~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~ 83 (123)
T 1ueq_A 9 FTRDASQLKGTFLSTTLKKSN--MGFGFTIIGGDEP---DEFLQVKSVIPDGPAAQDGKMETGDVIVYINEVCVLGHTHA 83 (123)
T ss_dssp CCSSSTTCCSEEEEEEEECCT--TSCSEEEECCSSS---SCCCEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTSCHH
T ss_pred cccCcccCCCcEEEEEEEeCC--CceeEEEecccCC---CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHH
Confidence 444555566778899999986 6999999987653 34799999999999999999999999999999999999999
Q ss_pred HHHHHHhcCC-CCeEEEEEEcCCCC
Q psy6070 1372 EAITIFKKTK-QGLVELVLQPNTTE 1395 (1454)
Q Consensus 1372 EAVSLLKqSG-qGSVsLVVrR~kse 1395 (1454)
+++.+|+... +..|.|+|.|....
T Consensus 84 ~~~~~l~~~~~g~~v~l~v~R~~~~ 108 (123)
T 1ueq_A 84 DVVKLFQSVPIGQSVNLVLCRGYPL 108 (123)
T ss_dssp HHHHHHHTSCTTCEEEEEEEESCCC
T ss_pred HHHHHHHhCCCCCeEEEEEEeCCCC
Confidence 9999999953 47899999987643
No 14
>2jik_A Synaptojanin-2 binding protein; transmembrane, outer membrane, mitochondria distribution, PDZ, membrane, scaffold, mitochondrion, membrane protein; 1.35A {Homo sapiens} PDB: 2jin_A
Probab=99.44 E-value=6.9e-13 Score=117.36 Aligned_cols=91 Identities=36% Similarity=0.581 Sum_probs=80.1
Q ss_pred CceEEEEEEeCCCCCcccEEEEeccCCCC--CCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHh
Q psy6070 1301 PTLVRVSFEKGPGKKSLGFSIVGGVDSPK--GEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFK 1378 (1454)
Q Consensus 1301 pEIRTVrLqKGpG~EGLGFSIRGGkDQP~--Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLK 1378 (1454)
...+.|+|.|++ .+|||+|.++.+.+. ...+++|..|.+||+|+++|+|+.||+|++|||+.+.++++.+++.+|+
T Consensus 6 ~~~~~v~l~~~~--~~lG~~l~~g~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~ 83 (101)
T 2jik_A 6 VTEEEINLTRGP--SGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFR 83 (101)
T ss_dssp EEEEEEEEECCT--TCCCEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHH
T ss_pred CccEEEEEEeCC--CCCCEEEeccccCCCccCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 457899999987 699999999876531 2458999999999999999999999999999999999999999999999
Q ss_pred cCCCCeEEEEEEcCCC
Q psy6070 1379 KTKQGLVELVLQPNTT 1394 (1454)
Q Consensus 1379 qSGqGSVsLVVrR~ks 1394 (1454)
..+ ..|.|+|.|...
T Consensus 84 ~~g-~~v~l~v~R~~~ 98 (101)
T 2jik_A 84 NAG-YAVSLRVQHRLE 98 (101)
T ss_dssp TCC-SEEEEEEEEESC
T ss_pred hCC-CeEEEEEEeCCC
Confidence 875 789999988644
No 15
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=99.44 E-value=7.1e-13 Score=116.07 Aligned_cols=87 Identities=25% Similarity=0.413 Sum_probs=76.2
Q ss_pred CceEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcC
Q psy6070 1301 PTLVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKT 1380 (1454)
Q Consensus 1301 pEIRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqS 1380 (1454)
+.++.|+|.|+. ++|||++.++.. ..+++|..|.+||||+++|+|+.||+|++|||+.+.+++|++++.+|+..
T Consensus 3 ~~~r~v~l~k~~--~~lG~~i~~~~~----~~~~~V~~v~~gspA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 76 (93)
T 3o46_A 3 DSVKIIRLVKNR--EPLGATIKKDEQ----TGAIIVARIMRGGAADRSGLIHVGDELREVNGIPVEDKRPEEIIQILAQS 76 (93)
T ss_dssp -CCEEEEEEESS--SCCCEEEEECTT----TCCEEEEEECTTSHHHHHTCCCTTCEEEEETTEESTTSCHHHHHHHHHHC
T ss_pred ccEEEEEEEeCC--CCccEEEEecCC----CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 567899999986 699999998621 24799999999999999999999999999999999999999999999998
Q ss_pred CCCeEEEEEEcCCC
Q psy6070 1381 KQGLVELVLQPNTT 1394 (1454)
Q Consensus 1381 GqGSVsLVVrR~ks 1394 (1454)
+ +.|.|+|.+...
T Consensus 77 ~-~~v~l~v~~~~~ 89 (93)
T 3o46_A 77 Q-GAITFKIIPGSK 89 (93)
T ss_dssp C-EEEEEEEECC--
T ss_pred C-CeEEEEEEeCCC
Confidence 7 699999987643
No 16
>3axa_A Afadin, nectin-3, protein AF-6; PDZ domain, fusion protein, cell adhesion; 2.78A {Mus musculus} PDB: 1xz9_A 2exg_A* 1t2m_A 2ain_A
Probab=99.44 E-value=8.6e-13 Score=117.93 Aligned_cols=93 Identities=27% Similarity=0.498 Sum_probs=79.6
Q ss_pred CCCceEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHh
Q psy6070 1299 CEPTLVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFK 1378 (1454)
Q Consensus 1299 ~ppEIRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLK 1378 (1454)
.+.+++.|+| |.. .+|||+|.++.+......+++|..|.+||||+++|+|++||+|++|||+.+.++++.+++.+++
T Consensus 8 ~~~~~~~v~l-~~~--~glG~~i~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~~~ 84 (106)
T 3axa_A 8 KEPEIITVTL-KKQ--NGMGLSIVAAKGAGQDKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAELMT 84 (106)
T ss_dssp --CCEEEEEE-ECS--SSCSEEEEEEECSSCSSEEEEEEEEBTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred CCceEEEEEE-CCC--CccCEEEEeecCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 3456788888 665 6899999987654444568999999999999999999999999999999999999999999999
Q ss_pred cCCCCeEEEEEEcCCCC
Q psy6070 1379 KTKQGLVELVLQPNTTE 1395 (1454)
Q Consensus 1379 qSGqGSVsLVVrR~kse 1395 (1454)
..+ ..|.|+|.|....
T Consensus 85 ~~g-~~v~l~v~R~~~~ 100 (106)
T 3axa_A 85 RTS-SVVTLEVAKQGAI 100 (106)
T ss_dssp TCC-SEEEEEEECCCSS
T ss_pred cCC-CeEEEEEEeCCcc
Confidence 876 7999999987543
No 17
>1um1_A KIAA1849 protein, RSGI RUH-007; PDZ domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.44 E-value=1.3e-12 Score=117.54 Aligned_cols=92 Identities=25% Similarity=0.497 Sum_probs=82.5
Q ss_pred CCCceEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHh
Q psy6070 1299 CEPTLVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFK 1378 (1454)
Q Consensus 1299 ~ppEIRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLK 1378 (1454)
.+.+.+.|+|.|+. .+|||+|.++.+.+.+..+++|..|.+||||+++|+|++||+|++|||+.+.++++.+++.+++
T Consensus 5 ~~~~~~~v~l~~~~--~glG~~l~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~ 82 (110)
T 1um1_A 5 SSGYVFTVELERGP--SGLGMGLIDGMHTHLGAPGLYIQTLLPGSPAAADGRLSLGDRILEVNGSSLLGLGYLRAVDLIR 82 (110)
T ss_dssp SCCCEEEEEEECCT--TCCCEEEEETTTSTTCCSSEEEEEECTTSHHHHHSCCCTTCEEEEESSCBCSSCCHHHHHHHHH
T ss_pred CCCcEEEEEEEECC--CccCEEEeCCcCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 34677899999987 6999999998766544568999999999999999999999999999999999999999999999
Q ss_pred cCCCCeEEEEEEcCC
Q psy6070 1379 KTKQGLVELVLQPNT 1393 (1454)
Q Consensus 1379 qSGqGSVsLVVrR~k 1393 (1454)
..+ ..|.|+|.|..
T Consensus 83 ~~~-~~v~l~v~R~~ 96 (110)
T 1um1_A 83 HGG-KKMRFLVAKSD 96 (110)
T ss_dssp TCC-SEEEEEEECCC
T ss_pred cCC-CeEEEEEEeCC
Confidence 985 79999999864
No 18
>2byg_A Channel associated protein of synapse-110; DLG2, PDZ, PDZ domain, structural genomics, structural genom consortium, SGC, phosphorylation; 1.85A {Homo sapiens} SCOP: b.36.1.1
Probab=99.44 E-value=5.6e-13 Score=122.95 Aligned_cols=91 Identities=42% Similarity=0.636 Sum_probs=80.2
Q ss_pred CCceEEEEEEeCCCCCcccEEEEeccCCC--CCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHH
Q psy6070 1300 EPTLVRVSFEKGPGKKSLGFSIVGGVDSP--KGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIF 1377 (1454)
Q Consensus 1300 ppEIRTVrLqKGpG~EGLGFSIRGGkDQP--~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLL 1377 (1454)
+++++.|+|.|+. .+|||+|.++.+.+ .+..+++|..|.+||||+++|+|++||+|++|||+++.++++++++.+|
T Consensus 22 ~~~~~~v~l~k~~--~glG~~i~gg~~~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l 99 (117)
T 2byg_A 22 SMTVVEIKLFKGP--KGLGFSIAGGVGNQHIPGDNSIYVTKIIDGGAAQKDGRLQVGDRLLMVNNYSLEEVTHEEAVAIL 99 (117)
T ss_dssp EEEEEEEEEECBT--TBSSEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred CCceEEEEEEeCC--CCcCEEEEcccCCCCccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 3567889999886 69999999987643 2345899999999999999999999999999999999999999999999
Q ss_pred hcCCCCeEEEEEEcCC
Q psy6070 1378 KKTKQGLVELVLQPNT 1393 (1454)
Q Consensus 1378 KqSGqGSVsLVVrR~k 1393 (1454)
+..+ ..|.|+|.|..
T Consensus 100 ~~~g-~~v~l~v~R~~ 114 (117)
T 2byg_A 100 KNTS-EVVYLKVGKPT 114 (117)
T ss_dssp HTCC-SEEEEEEEEEE
T ss_pred HcCC-CeEEEEEEeCC
Confidence 9886 79999998853
No 19
>3egg_C Spinophilin; PP1, serine/threonine phosphatase, post synapti density, glutametergic receptors, carbohydrate metabolism, cycle, cell division; HET: MES; 1.85A {Rattus norvegicus} PDB: 3egh_C* 3hvq_C 2fn5_A
Probab=99.43 E-value=5.9e-13 Score=131.49 Aligned_cols=89 Identities=33% Similarity=0.513 Sum_probs=78.6
Q ss_pred CceEEEEEEeCCCCCcccEEEEe---ccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHH
Q psy6070 1301 PTLVRVSFEKGPGKKSLGFSIVG---GVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIF 1377 (1454)
Q Consensus 1301 pEIRTVrLqKGpG~EGLGFSIRG---GkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLL 1377 (1454)
.+++.|.|.|+. .||||+|.+ +.+...+..+|||..|.+||||+++|+|++||+|++|||+++.+++|.+++.+|
T Consensus 79 ~~~~~v~l~k~~--~glG~~i~g~~~g~~~~~~~~gi~V~~V~~gspA~~aG~L~~GD~Il~VNG~~v~~~~~~~~~~~l 156 (170)
T 3egg_C 79 LELFPVELEKDS--EGLGISIIGMGAGADMGLEKLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVL 156 (170)
T ss_dssp SEEEEEEEECBT--TBSSEEEEEECSSSSCCSSSBEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTBCHHHHHHHH
T ss_pred ceEEEEEEEeCC--CeEeEEEEecccCCccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 456789999987 689999999 444333456899999999999999999999999999999999999999999999
Q ss_pred hcCCCCeEEEEEEcC
Q psy6070 1378 KKTKQGLVELVLQPN 1392 (1454)
Q Consensus 1378 KqSGqGSVsLVVrR~ 1392 (1454)
+.++ +.|.|+|.|.
T Consensus 157 ~~~g-~~v~L~V~R~ 170 (170)
T 3egg_C 157 RNTK-GRVRFMIGRE 170 (170)
T ss_dssp HHCC-SEEEEEEEEC
T ss_pred HcCC-CEEEEEEEeC
Confidence 9986 7999999873
No 20
>3cbz_A Dishevelled-2; PDZ domain, phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, WNT signaling pathway; 1.38A {Homo sapiens} PDB: 3cby_A 3cc0_A 3cbx_A 2rey_A 2f0a_A 1l6o_A 3fy5_A 2kaw_A* 1mc7_A
Probab=99.43 E-value=4.4e-13 Score=121.61 Aligned_cols=92 Identities=24% Similarity=0.473 Sum_probs=78.8
Q ss_pred ceEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcC-
Q psy6070 1302 TLVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKT- 1380 (1454)
Q Consensus 1302 EIRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqS- 1380 (1454)
++++|.|.|.+ ..+|||+|.++.+. ....+++|..|.+||||+++|+|++||+|++|||+++.+++|++++.+|+..
T Consensus 5 ~~~~v~l~k~~-~~~lG~~i~g~~~~-~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~ 82 (108)
T 3cbz_A 5 NIITVTLNMEK-YNFLGISIVGQSNE-RGDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDMNFENMSNDDAVRVLRDIV 82 (108)
T ss_dssp CEEEEEECHHH-HCCCCEEEEEECSS-TTCCEEEEEEECTTSHHHHHCCCCTTCEEEEETTEETTSCCHHHHHHHHHHHH
T ss_pred eEEEEEEEeCC-CCccCEEEEcCcCC-CCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhcc
Confidence 56789999865 36899999998653 2346899999999999999999999999999999999999999999999987
Q ss_pred -CCCeEEEEEEcCCCC
Q psy6070 1381 -KQGLVELVLQPNTTE 1395 (1454)
Q Consensus 1381 -GqGSVsLVVrR~kse 1395 (1454)
..+.|.|+|.|....
T Consensus 83 ~~~~~v~l~v~R~~~~ 98 (108)
T 3cbz_A 83 HKPGPIVLTVAKSGGG 98 (108)
T ss_dssp TSSSCEEEEEECCCC-
T ss_pred cCCCeEEEEEEeCCCC
Confidence 335799999987543
No 21
>1wf8_A Neurabin-I; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.43 E-value=7.9e-13 Score=118.65 Aligned_cols=92 Identities=35% Similarity=0.517 Sum_probs=80.3
Q ss_pred CceEEEEEEeCCCCCcccEEEEe---ccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHH
Q psy6070 1301 PTLVRVSFEKGPGKKSLGFSIVG---GVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIF 1377 (1454)
Q Consensus 1301 pEIRTVrLqKGpG~EGLGFSIRG---GkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLL 1377 (1454)
.+++.|.|.|.. .+|||+|.+ +.+......+++|..|.+||||+++|+|++||+|++|||+.+.++++.+++.+|
T Consensus 8 ~~~~~v~l~k~~--~glG~~i~~~~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~ 85 (107)
T 1wf8_A 8 LELFPVELEKDE--DGLGISIIGMGVGADAGLEKLGIFVKTVTEGGAAQRDGRIQVNDQIVEVDGISLVGVTQNFAATVL 85 (107)
T ss_dssp EEEEEEEEECBT--TBSCEEEEEEEESCCTTCCEEEEEEEEECTTCHHHHHCSSCTTCBEEEETTEECBSCCHHHHHHHH
T ss_pred ceEEEEEEEECC--CcccEEEEecCCCCCCCCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 456788998876 699999999 555433456899999999999999999999999999999999999999999999
Q ss_pred hcCCCCeEEEEEEcCCCC
Q psy6070 1378 KKTKQGLVELVLQPNTTE 1395 (1454)
Q Consensus 1378 KqSGqGSVsLVVrR~kse 1395 (1454)
+..+ ..|.|+|.|....
T Consensus 86 ~~~~-~~v~l~v~R~~~~ 102 (107)
T 1wf8_A 86 RNTK-GNVRFVIGREKPS 102 (107)
T ss_dssp HHCC-SEEEEEEEEECCC
T ss_pred hcCC-CeEEEEEEeCCCC
Confidence 9986 7999999886543
No 22
>2i1n_A Discs, large homolog 3; DLG3, PDZ, PDZ domain, signal transduction, structural genom structural genomics consortium, SGC, signaling protein; 1.85A {Homo sapiens} PDB: 2wl7_A 3rl7_B 1rgr_A* 1kef_A 1zok_A 1iu0_A 1iu2_A
Probab=99.43 E-value=1e-12 Score=116.45 Aligned_cols=92 Identities=33% Similarity=0.547 Sum_probs=80.4
Q ss_pred CceEEEEEEeCCCCCcccEEEEeccCCCC--CCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHh
Q psy6070 1301 PTLVRVSFEKGPGKKSLGFSIVGGVDSPK--GEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFK 1378 (1454)
Q Consensus 1301 pEIRTVrLqKGpG~EGLGFSIRGGkDQP~--Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLK 1378 (1454)
.+++.|.|.|+. .+|||+|.++.+.+. +..+++|..|.+||||+++|+|++||+|++|||+.+.++++.+++.+++
T Consensus 3 ~~~~~v~l~k~~--~glG~~i~~g~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~ 80 (102)
T 2i1n_A 3 FKYEEIVLERGN--SGLGFSIAGGIDNPHVPDDPGIFITKIIPGGAAAMDGRLGVNDCVLRVNEVDVSEVVHSRAVEALK 80 (102)
T ss_dssp EEEEEEEEECBT--TBTSEEEEECTTSCSSTTCCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHH
T ss_pred ceEEEEEEEECC--CcCCEEEEcccCCCCcCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 356889999976 699999999876432 2458999999999999999999999999999999999999999999999
Q ss_pred cCCCCeEEEEEEcCCCC
Q psy6070 1379 KTKQGLVELVLQPNTTE 1395 (1454)
Q Consensus 1379 qSGqGSVsLVVrR~kse 1395 (1454)
..+ ..|.|+|.|....
T Consensus 81 ~~g-~~v~l~v~R~~~~ 96 (102)
T 2i1n_A 81 EAG-PVVRLVVRRRQPP 96 (102)
T ss_dssp HSC-SEEEEEEEEECCC
T ss_pred cCC-CeEEEEEEeCCCC
Confidence 976 7999999886543
No 23
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=99.42 E-value=2.3e-13 Score=129.44 Aligned_cols=139 Identities=27% Similarity=0.392 Sum_probs=106.1
Q ss_pred CCC-CCCCCceeccCCccCccCCCCCCchhhhcccCCCCccccccccccccccCCCCCCCCCceEEEEEEeCCCCCcccE
Q psy6070 1241 SPN-ATNSNQALTNLTDSVSNTNQESPTSTELAKTSSGGFGLLHSLLASRSAFRSRPQTCEPTLVRVSFEKGPGKKSLGF 1319 (1454)
Q Consensus 1241 SPS-sTqGDRLLeVNGEDVSNASQEEpSSVqLLKkSSgSVgLlhSiLASssvLPSRPrs~ppEIRTVrLqKGpG~EGLGF 1319 (1454)
... +..||.|+.+|+..+....+... ..+++..+..+.+... +.. ......+.|.|.+.. .+|||
T Consensus 50 ~aG~l~~GD~I~~vng~~v~~~~~~~~--~~~~~~~g~~v~l~v~--------r~~--~~~~~~~~v~l~~~~--~~lG~ 115 (196)
T 3gsl_A 50 QDGRLRVNDSILFVNEVDVREVTHSAA--VEALKEAGSIVRLYVM--------RRK--PPAEKVMEIKLIKGP--KGLGF 115 (196)
T ss_dssp HHCCCCTTCEEEEETTEECTTCCHHHH--HHHHHTSCSEEEEEEE--------EEC--CCCEEEEEEEEEEBT--TBSCE
T ss_pred hcCCCCCCCEEEEECCEECCCCCHHHH--HHHHHhCCCcEEEEEE--------ecC--CCccccEEEEEecCC--CCceE
Confidence 345 88999999999999987766554 3444444444444321 111 112345678888877 58999
Q ss_pred EEEeccCCCC--CCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcCCCCeEEEEEEcCCC
Q psy6070 1320 SIVGGVDSPK--GEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKTKQGLVELVLQPNTT 1394 (1454)
Q Consensus 1320 SIRGGkDQP~--Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqSGqGSVsLVVrR~ks 1394 (1454)
++.++.+... ...+++|..|.+||+|+++|+|++||+|++|||+++.++++++++.+|+..+ ..+.|+|.|...
T Consensus 116 ~~~~~~~~~~~~~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~-~~v~l~v~R~~~ 191 (196)
T 3gsl_A 116 SIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGRLQIGDKILAVNSVGLEDVMHEDAVAALKNTY-DVVYLKVAKPSN 191 (196)
T ss_dssp EEEESBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCBHHHHHHHHHSCC-EEEEEEEEEESC
T ss_pred EEEccCCCcCCCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCCcCCCCCHHHHHHHHHcCC-CeEEEEEeCCCC
Confidence 9998765421 2358999999999999999999999999999999999999999999999886 789999988643
No 24
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=99.41 E-value=1.6e-12 Score=150.56 Aligned_cols=119 Identities=31% Similarity=0.422 Sum_probs=95.0
Q ss_pred ceEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcCC
Q psy6070 1302 TLVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKTK 1381 (1454)
Q Consensus 1302 EIRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqSG 1381 (1454)
..+.|.|.+.. .+|||+|.++.+. .+|+|..|.+||+|+++|+|++||+|++|||+++.+++|++++.+|+..+
T Consensus 307 ~~~~v~l~~~~--~~lG~~i~~~~~~----~gv~V~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~~~~e~~~~l~~~~ 380 (721)
T 2xkx_A 307 EPRRIVIHRGS--TGLGFNIVGGEDG----EGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAG 380 (721)
T ss_pred ceEEEEEEECC--CCccEEEeccCCC----CCeEEEEeCCCChHHhcCCCccCCEEEEECCEECCCCCHHHHHHHHHhcC
Confidence 46788999876 6899999987542 48999999999999999999999999999999999999999999999986
Q ss_pred CCeEEEEEEcCCCCCCc----------------------cccCCCCCcccccccccccccCCCCCCCCCCccCC
Q psy6070 1382 QGLVELVLQPNTTEADS----------------------KEGLNLQPRLIPRADFTTQIYHSYNPTQPRLIPRA 1433 (1454)
Q Consensus 1382 qGSVsLVVrR~kses~S----------------------eesL~~EPpL~PRALFSnQsS~SYDPSQDSLIPCK 1433 (1454)
+.|.|+|.|....... .........++++++| +|++..+..+|+.
T Consensus 381 -~~v~L~v~r~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~~~~~~~~~~~vrAl~------dy~~~~d~~~p~~ 447 (721)
T 2xkx_A 381 -QTVTIIAQYKPEEYSRFEAKIHDLREQLMNSSLGSGTASLRSNPKRGFYIRALF------DYDKTKDCGFLSQ 447 (721)
T ss_pred -CeEEEEEEeCchhhhhhhhhhhhhhhhcccccccCCccccccccccceeEEEee------ccCcCCCCCCccc
Confidence 7899999876532110 0001123456788888 9999988776643
No 25
>1ujd_A KIAA0559 protein; PDZ domain, structural genomics, human cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.41 E-value=1.7e-12 Score=118.93 Aligned_cols=96 Identities=29% Similarity=0.543 Sum_probs=81.3
Q ss_pred CCCceEEEEEEeCCC-----CCcccEEEEeccCCC--CCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHH
Q psy6070 1299 CEPTLVRVSFEKGPG-----KKSLGFSIVGGVDSP--KGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHA 1371 (1454)
Q Consensus 1299 ~ppEIRTVrLqKGpG-----~EGLGFSIRGGkDQP--~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHE 1371 (1454)
.+...+.|+|.|... ..+|||+|.++.+.+ .+..+++|..|.+||||+++|+|++||+|++|||+++.+++|+
T Consensus 9 ~~~~~~~v~l~r~~~~~~~~~~glG~~i~g~~~~~~~~~~~g~~V~~v~~~s~A~~aG~L~~GD~Il~vng~~v~~~~~~ 88 (117)
T 1ujd_A 9 YIFPHARIKITRDSKDHTVSGNGLGIRIVGGKEIPGHSGEIGAYIAKILPGGSAEQTGKLMEGMQVLEWNGIPLTSKTYE 88 (117)
T ss_dssp CSSCEEEEEECCCSSSSCSSCCSCSEEEEEEEECSSSSSCEEEEEEEECTTCHHHHHSSCCTTCEEEEETTEECTTCCHH
T ss_pred CCCceEEEEEEecCcccCCCCCcccEEEeCCCCCCcccCCcCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHH
Confidence 345567889988761 258999999987642 1345899999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCeEEEEEEcCCCC
Q psy6070 1372 EAITIFKKTKQGLVELVLQPNTTE 1395 (1454)
Q Consensus 1372 EAVSLLKqSGqGSVsLVVrR~kse 1395 (1454)
+++.+|+..+ ..|.|+|.|....
T Consensus 89 ~~~~~l~~~~-~~v~l~v~R~~~~ 111 (117)
T 1ujd_A 89 EVQSIISQQS-GEAEICVRLDLNM 111 (117)
T ss_dssp HHHHHHSCCS-SCEEEEEESSCCC
T ss_pred HHHHHHhcCC-CEEEEEEEECCcc
Confidence 9999999976 7899999987543
No 26
>2kpk_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; PDZ domain, ATP-binding, cell junction, cell membrane; NMR {Homo sapiens} PDB: 2kpl_A
Probab=99.41 E-value=2.4e-12 Score=119.92 Aligned_cols=99 Identities=26% Similarity=0.461 Sum_probs=84.7
Q ss_pred cCCCCCCCCCceEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHH
Q psy6070 1292 FRSRPQTCEPTLVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHA 1371 (1454)
Q Consensus 1292 LPSRPrs~ppEIRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHE 1371 (1454)
+...+.....+.+.|.|.|+. .+|||+|.++.+. ..+++|..|.+||+|+++|+|+.||+|++|||+.+.+++|+
T Consensus 8 ~~~~~~~~~g~~~~v~l~~~~--~g~G~~i~g~~~~---~~~v~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~ 82 (129)
T 2kpk_A 8 FTRNPSELKGKFIHTKLRKSS--RGFGFTVVGGDEP---DEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHA 82 (129)
T ss_dssp CCSCTTTSCSEEEEEEEEECS--SCCSEEEEEEEET---TEEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTSCHH
T ss_pred cCCCchhcCCcEEEEEEEECC--CcccEEEeCccCC---CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHH
Confidence 444555566778899999976 6999999997643 34799999999999999999999999999999999999999
Q ss_pred HHHHHHhcCC-CCeEEEEEEcCCCC
Q psy6070 1372 EAITIFKKTK-QGLVELVLQPNTTE 1395 (1454)
Q Consensus 1372 EAVSLLKqSG-qGSVsLVVrR~kse 1395 (1454)
+++.+|+... +..|.|+|.|....
T Consensus 83 ~~~~~l~~~~~g~~v~l~v~R~~~~ 107 (129)
T 2kpk_A 83 QVVKIFQSIPIGASVDLELCRGYPL 107 (129)
T ss_dssp HHHHHHHHSCTTEEEEEEEEECSCC
T ss_pred HHHHHHHhCCCCCeEEEEEEeCCCC
Confidence 9999999984 36899999987543
No 27
>1kwa_A Hcask/LIN-2 protein; PDZ domain, neurexin, syndecan, receptor clustering, kinase; 1.93A {Homo sapiens} SCOP: b.36.1.1
Probab=99.40 E-value=1.4e-12 Score=114.50 Aligned_cols=85 Identities=20% Similarity=0.288 Sum_probs=74.6
Q ss_pred eEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcCCC
Q psy6070 1303 LVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKTKQ 1382 (1454)
Q Consensus 1303 IRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqSGq 1382 (1454)
++.|+|.|+++ .+|||+|.++.. .+++|..|.+||||++++.|++||+|++|||+++.+++|++++++|+...
T Consensus 2 ~r~V~l~K~~~-~~lG~~i~~~~~-----~~~~I~~V~~gspA~~~agL~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~- 74 (88)
T 1kwa_A 2 SRLVQFQKNTD-EPMGITLKMNEL-----NHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMR- 74 (88)
T ss_dssp CEEEEEEECSS-SCCCEEEECSCG-----GGEEEEEECTTSHHHHHTCCCTTCEEEEETTEEGGGSCHHHHHHHHHHCC-
T ss_pred eEEEEEEeCCC-CceeEEEEeCCC-----CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCC-
Confidence 57899999974 789999998532 37999999999999995449999999999999999999999999999987
Q ss_pred CeEEEEEEcCCC
Q psy6070 1383 GLVELVLQPNTT 1394 (1454)
Q Consensus 1383 GSVsLVVrR~ks 1394 (1454)
+.|.|+|.|...
T Consensus 75 ~~v~l~v~r~~~ 86 (88)
T 1kwa_A 75 GSITFKIVPSYR 86 (88)
T ss_dssp EEEEEEEECCCC
T ss_pred CcEEEEEECCcC
Confidence 599999988643
No 28
>1q7x_A PDZ2B domain of PTP-BAS (HPTP1E); phosphatase, structural proteomics in europe, spine, structural genomics, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.40 E-value=1.3e-12 Score=117.16 Aligned_cols=92 Identities=33% Similarity=0.606 Sum_probs=81.9
Q ss_pred CCceEEEEEEeCCCCCcccEEEE-----eccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHH
Q psy6070 1300 EPTLVRVSFEKGPGKKSLGFSIV-----GGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAI 1374 (1454)
Q Consensus 1300 ppEIRTVrLqKGpG~EGLGFSIR-----GGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAV 1374 (1454)
+.+.+.|.|.|+. .+|||+|. ||.+......+++|..|.+||||+++|+|++||+|++|||+.+.++++.+++
T Consensus 7 ~~~~~~v~l~k~~--~~lG~~i~~~~~~gg~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~ 84 (108)
T 1q7x_A 7 PGDIFEVELAKND--NSLGISVTVLFDKGGVNTSVRHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAV 84 (108)
T ss_dssp SSSEEEEEEESSS--CSCCEEESSSSSSBCBCTTSSSCCCBEEEECTTSTHHHHTCCCSSCEEEEETTEECBSCTTSHHH
T ss_pred CCcEEEEEEEECC--CCccEEEEEeccCCCccccCCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHH
Confidence 4667899999986 68999999 8776544456899999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCeEEEEEEcCCC
Q psy6070 1375 TIFKKTKQGLVELVLQPNTT 1394 (1454)
Q Consensus 1375 SLLKqSGqGSVsLVVrR~ks 1394 (1454)
.+++..+ ..|.|+|.|...
T Consensus 85 ~~~~~~g-~~v~l~v~R~~~ 103 (108)
T 1q7x_A 85 ETLRNTG-QVVHLLLEKGQS 103 (108)
T ss_dssp HHHHHTT-SEEEEEEECCCC
T ss_pred HHHHcCC-CeEEEEEEeCCc
Confidence 9999986 799999998653
No 29
>2qg1_A Multiple PDZ domain protein; MPDZ, MUPP1, structural genomics, structural genomics consortium, SGC, signaling protein; 1.40A {Homo sapiens}
Probab=99.40 E-value=2.7e-12 Score=111.67 Aligned_cols=86 Identities=34% Similarity=0.583 Sum_probs=77.3
Q ss_pred ceEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcCC
Q psy6070 1302 TLVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKTK 1381 (1454)
Q Consensus 1302 EIRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqSG 1381 (1454)
+.+.|+|.|.++ .+|||++.++.+ ..+++|..|.+||||+++|+|++||+|++|||+.+.++++++++.+++..+
T Consensus 4 ~~~~v~l~k~~~-~~lG~~~~~~~~----~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~ 78 (92)
T 2qg1_A 4 DTLTIGLQKKPG-KGLGLSIVGKRN----DTGVFVSDIVKGGIADADGRLMQGDQILMVNGEDVRNATQEAVAALLKCSL 78 (92)
T ss_dssp CEEEEEEECCTT-SCCSEEEECCSS----SCSCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHHCC
T ss_pred eEEEEEEEeCCC-CcccEEEEeccC----CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 468899999763 799999998754 248999999999999999999999999999999999999999999999886
Q ss_pred CCeEEEEEEcCC
Q psy6070 1382 QGLVELVLQPNT 1393 (1454)
Q Consensus 1382 qGSVsLVVrR~k 1393 (1454)
..+.|+|.|..
T Consensus 79 -~~v~l~v~R~~ 89 (92)
T 2qg1_A 79 -GTVTLEVGRIS 89 (92)
T ss_dssp -SEEEEEEECCC
T ss_pred -CeEEEEEEccc
Confidence 78999998865
No 30
>1wha_A KIAA0147 protein, scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.40 E-value=1.7e-12 Score=116.09 Aligned_cols=91 Identities=29% Similarity=0.485 Sum_probs=79.7
Q ss_pred CceEEEEEEeCCCCCcccEEEEeccCCC---CCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHH
Q psy6070 1301 PTLVRVSFEKGPGKKSLGFSIVGGVDSP---KGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIF 1377 (1454)
Q Consensus 1301 pEIRTVrLqKGpG~EGLGFSIRGGkDQP---~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLL 1377 (1454)
.+.+.|.|.|+. .+|||+|.++.+.. .+..+++|..|.++|||+++|+|++||+|++|||+.+.++++++++.+|
T Consensus 6 ~~~~~v~l~~~~--~glG~~l~~g~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l 83 (105)
T 1wha_A 6 SGRHVACLARSE--RGLGFSIAGGKGSTPYRAGDAGIFVSRIAEGGAAHRAGTLQVGDRVLSINGVDVTEARHDHAVSLL 83 (105)
T ss_dssp CEEEEEEECCCT--TCCSCEEECCTTSCCSSTTCCSCEEEECCTTSSHHHHSSCCTTCEEEEESSCBCTTCCHHHHHHHH
T ss_pred CeeEEEEEEeCC--CccCEEEEeccCCCcccCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 456788998887 68999999987642 1245899999999999999999999999999999999999999999999
Q ss_pred hcCCCCeEEEEEEcCCC
Q psy6070 1378 KKTKQGLVELVLQPNTT 1394 (1454)
Q Consensus 1378 KqSGqGSVsLVVrR~ks 1394 (1454)
+..+ ..|.|+|.|...
T Consensus 84 ~~~g-~~v~l~v~R~~~ 99 (105)
T 1wha_A 84 TAAS-PTIALLLEREAG 99 (105)
T ss_dssp TSCC-SCEEEEEEECCC
T ss_pred HcCC-CeEEEEEEECCC
Confidence 9885 789999998754
No 31
>2vwr_A Ligand of NUMB protein X 2; protein-binding, metal-binding, zinc, LNX2_human, zinc-finger, polymorphism, ring finger protein 1; 1.3A {Homo sapiens}
Probab=99.39 E-value=2.4e-12 Score=112.77 Aligned_cols=88 Identities=25% Similarity=0.389 Sum_probs=77.7
Q ss_pred ceEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcCC
Q psy6070 1302 TLVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKTK 1381 (1454)
Q Consensus 1302 EIRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqSG 1381 (1454)
+++.|.|.|...+.+|||+|.++.+. .+++|..|.+||||+++|+|++||+|++|||+++.++++.+++.+++..+
T Consensus 3 ~~~~v~l~k~~~~~~lG~~~~~~~~~----~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~g 78 (95)
T 2vwr_A 3 EILQVALHKRDSGEQLGIKLVRRTDE----PGVFILDLLEGGLAAQDGRLSSNDRVLAINGHDLKYGTPELAAQIIQASG 78 (95)
T ss_dssp EEEEEEEECSSTTCCCCEEEEECSSS----CSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCC
T ss_pred EEEEEEEEECCCCCcccEEEEeccCC----CCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 46789999864347899999987653 48999999999999999999999999999999999999999999999886
Q ss_pred CCeEEEEEEcCCC
Q psy6070 1382 QGLVELVLQPNTT 1394 (1454)
Q Consensus 1382 qGSVsLVVrR~ks 1394 (1454)
..+.|+|.|...
T Consensus 79 -~~v~l~v~R~~~ 90 (95)
T 2vwr_A 79 -ERVNLTIARPGK 90 (95)
T ss_dssp -SEEEEEEEEESC
T ss_pred -CEEEEEEEcCCc
Confidence 799999988653
No 32
>2o2t_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens}
Probab=99.39 E-value=1.1e-12 Score=118.99 Aligned_cols=92 Identities=37% Similarity=0.535 Sum_probs=80.4
Q ss_pred CceEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCC-CCCHHHHHHHHhc
Q psy6070 1301 PTLVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQ-GRTHAEAITIFKK 1379 (1454)
Q Consensus 1301 pEIRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVE-GLTHEEAVSLLKq 1379 (1454)
..++.|.|.|.++ .+|||+|.++.+...+..+++|..|.+||||+++|+|++||+|++|||+.+. ++++++++.+|+.
T Consensus 19 ~~~~~v~l~k~~~-~~lG~~i~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~Il~ing~~v~~~~~~~~~~~~l~~ 97 (117)
T 2o2t_A 19 RHVEVFELLKPPS-GGLGFSVVGLRSENRGELGIFVQEIQEGSVAHRDGRLKETDQILAINGQALDQTITHQQAISILQK 97 (117)
T ss_dssp SCEEEEEEECCSS-SCSSCCEEEEECCC--CEEEEECCCCTTSHHHHHCCCCTTCEEEEETTEECCTTSCHHHHHHHHHH
T ss_pred CeEEEEEEEECCC-CCCCEEEeecccCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCCHHHHHHHHHc
Confidence 4578999999863 7899999998755444568999999999999999999999999999999998 9999999999999
Q ss_pred CCCCeEEEEEEcCCC
Q psy6070 1380 TKQGLVELVLQPNTT 1394 (1454)
Q Consensus 1380 SGqGSVsLVVrR~ks 1394 (1454)
.+ ..|.|+|.|...
T Consensus 98 ~~-~~v~l~v~R~~~ 111 (117)
T 2o2t_A 98 AK-DTVQLVIARGSL 111 (117)
T ss_dssp CC-SEEEEEEESSCC
T ss_pred CC-CEEEEEEEeCCc
Confidence 76 799999998754
No 33
>1uju_A Scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.39 E-value=7.6e-13 Score=119.43 Aligned_cols=94 Identities=30% Similarity=0.526 Sum_probs=80.8
Q ss_pred CCceEEEEEEeCCCCCcccEEEEeccCCC------CCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHH
Q psy6070 1300 EPTLVRVSFEKGPGKKSLGFSIVGGVDSP------KGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEA 1373 (1454)
Q Consensus 1300 ppEIRTVrLqKGpG~EGLGFSIRGGkDQP------~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEA 1373 (1454)
++.++.|.|.|+.+ .+|||+|.++.+.. ....+++|..|.+||+|+++|+|++||+|++|||+.+.++++.++
T Consensus 7 ~~~~~~v~l~k~~~-~~lG~~i~gg~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~ 85 (111)
T 1uju_A 7 GPGLRELCIQKAPG-ERLGISIRGGARGHAGNPRDPTDEGIFISKVSPTGAAGRDGRLRVGLRLLEVNQQSLLGLTHGEA 85 (111)
T ss_dssp SCSSSCEEEECCTT-CCCCEEEECCSSSSCSCSSCTTCCCCEEEEECTTSHHHHHSSCCTTCBCCBBSSCBCTTSCHHHH
T ss_pred CCccEEEEEEECCC-CccCEEEECCccccccccccCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHH
Confidence 45577899999873 79999999987431 124589999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCeEEEEEEcCCCC
Q psy6070 1374 ITIFKKTKQGLVELVLQPNTTE 1395 (1454)
Q Consensus 1374 VSLLKqSGqGSVsLVVrR~kse 1395 (1454)
+.+|+..+ ..|.|+|.|....
T Consensus 86 ~~~l~~~g-~~v~l~v~r~~~~ 106 (111)
T 1uju_A 86 VQLLRSVG-DTLTVLVCDGFES 106 (111)
T ss_dssp HHHHSSCS-SEEEECCCCCCCC
T ss_pred HHHHHcCC-CeEEEEEEECCCC
Confidence 99999975 7999999886543
No 34
>2he4_A Na(+)/H(+) exchange regulatory cofactor NHE-RF2; phosphorylation, structural genomics, structural genomics consortium, SGC, unknown function; 1.45A {Homo sapiens} PDB: 2ozf_A
Probab=99.39 E-value=3.3e-12 Score=110.94 Aligned_cols=86 Identities=24% Similarity=0.414 Sum_probs=77.0
Q ss_pred CceEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcC
Q psy6070 1301 PTLVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKT 1380 (1454)
Q Consensus 1301 pEIRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqS 1380 (1454)
+..+.|+|.|+. .+|||++.++.+. .+++|..|.+||||+++| |++||+|++|||+.+.+++|++++.+|+..
T Consensus 3 ~~~r~v~l~k~~--~g~G~~~~~~~~~----~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 75 (90)
T 2he4_A 3 LRPRLCHLRKGP--QGYGFNLHSDKSR----PGQYIRSVDPGSPAARSG-LRAQDRLIEVNGQNVEGLRHAEVVASIKAR 75 (90)
T ss_dssp TCCEEEEEECBT--TBCCEEEEECSSS----SSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTSCHHHHHHHHTTS
T ss_pred CCcEEEEEEECC--CCccEEEEccCCC----CCEEEEEECCCChHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 345899999987 6899999987642 479999999999999999 999999999999999999999999999998
Q ss_pred CCCeEEEEEEcCCC
Q psy6070 1381 KQGLVELVLQPNTT 1394 (1454)
Q Consensus 1381 GqGSVsLVVrR~ks 1394 (1454)
+ ..|.|+|.|...
T Consensus 76 ~-~~v~l~v~r~~~ 88 (90)
T 2he4_A 76 E-DEARLLVVGPST 88 (90)
T ss_dssp S-SEEEEEEECCCC
T ss_pred C-CcEEEEEEccCC
Confidence 5 799999998653
No 35
>1uhp_A Hypothetical protein KIAA1095; PDZ domain, semaphorin cytoplasmic domain associated protein, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.39 E-value=3e-12 Score=114.93 Aligned_cols=93 Identities=31% Similarity=0.446 Sum_probs=79.1
Q ss_pred CCceEEEEEEeCCCCCcccEEEEeccCCC-----CCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHH
Q psy6070 1300 EPTLVRVSFEKGPGKKSLGFSIVGGVDSP-----KGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAI 1374 (1454)
Q Consensus 1300 ppEIRTVrLqKGpG~EGLGFSIRGGkDQP-----~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAV 1374 (1454)
+.+.++|.|.|+. .+|||+|.++.+.. ....+++|..|.++|||+++|.|++||+|++|||+++.+++|.+++
T Consensus 6 ~~~~~~v~l~k~~--~~lG~~i~g~~~~~~~~~~~~~~gv~V~~V~~~spA~~aggL~~GD~Il~vng~~v~~~~~~~~~ 83 (107)
T 1uhp_A 6 SGKSLTLVLHRDS--GSLGFNIIGGRPSVDNHDGSSSEGIFVSKIVDSGPAAKEGGLQIHDRIIEVNGRDLSRATHDQAV 83 (107)
T ss_dssp SSEEEEEEECCSS--SCCSEEEECCCSCCCCTTSSCSCCCEEEEECSSSHHHHTTCCCSSCEEEEETTEECTTCCHHHHH
T ss_pred CcEEEEEEEEeCC--CccCEEEEcCCCCcccccccCCCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHH
Confidence 4567889999985 79999999987531 1245899999999999999944999999999999999999999999
Q ss_pred HHHhcCCCCeEEEEEEcCCCC
Q psy6070 1375 TIFKKTKQGLVELVLQPNTTE 1395 (1454)
Q Consensus 1375 SLLKqSGqGSVsLVVrR~kse 1395 (1454)
.+|+..+ ..|.|+|.|....
T Consensus 84 ~~~~~~~-~~v~l~v~R~~~~ 103 (107)
T 1uhp_A 84 EAFKTAK-EPIVVQVLRRTSG 103 (107)
T ss_dssp HHHHHCC-SSEEEEEEECCSS
T ss_pred HHHHcCC-CcEEEEEEeCCCC
Confidence 9999986 7899999886543
No 36
>2q9v_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; Cys Ser mutant, S genomics consortium, SGC, transferase; 2.00A {Homo sapiens}
Probab=99.38 E-value=1.7e-12 Score=112.49 Aligned_cols=85 Identities=25% Similarity=0.523 Sum_probs=75.6
Q ss_pred eEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcCCC
Q psy6070 1303 LVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKTKQ 1382 (1454)
Q Consensus 1303 IRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqSGq 1382 (1454)
.++|.|.|+. .+|||++.++.+. ..+++|..|.+||||+++|+|++||+|++|||+++.++++++++.+|+..+.
T Consensus 3 ~~~v~l~~~~--~g~G~~~~~g~~~---~~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~ 77 (90)
T 2q9v_A 3 EQDIFLWRKE--TGFGFRILGGNEP---GEPIYIGHIVPLGAADTDGRLRSGDELISVDGTPVIGKSHQLVVQLMQQAAK 77 (90)
T ss_dssp EEEEEEECBT--TBCCEEEEECSST---TSCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHHHHH
T ss_pred cEEEEEEECC--CccCEEEEccccC---CCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 4789999987 6899999998654 2379999999999999999999999999999999999999999999998752
Q ss_pred -CeEEEEEEcC
Q psy6070 1383 -GLVELVLQPN 1392 (1454)
Q Consensus 1383 -GSVsLVVrR~ 1392 (1454)
+.|.|+|.|.
T Consensus 78 ~~~v~l~v~R~ 88 (90)
T 2q9v_A 78 QGHVNLTVRQT 88 (90)
T ss_dssp HTEEEEEEEEC
T ss_pred CCeEEEEEEec
Confidence 3899999875
No 37
>2dc2_A GOPC, golgi associated PDZ and coiled-coil motif containing isoform B; GOPC PDZ domain, structural protein; NMR {Homo sapiens}
Probab=99.38 E-value=2.1e-12 Score=116.11 Aligned_cols=91 Identities=31% Similarity=0.435 Sum_probs=77.3
Q ss_pred CceEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcC
Q psy6070 1301 PTLVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKT 1380 (1454)
Q Consensus 1301 pEIRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqS 1380 (1454)
..++.|.|.|..+ .+|||+|.++.+. ..+++|..|.+||||++++.|++||+|++|||+++.++++++++.+|+..
T Consensus 8 ~~~~~v~l~~~~~-~~lG~~l~~g~~~---~~~~~V~~V~~~s~A~~a~gL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~ 83 (103)
T 2dc2_A 8 GPIRKVLLLKEDH-EGLGISITGGKEH---GVPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQQ 83 (103)
T ss_dssp -CEEEEEEECCSS-SCCCEEEEEEGGG---TEEEEEEEECTTSHHHHHTCCCSSEEEEEETTEESTTSCHHHHHHHHHHC
T ss_pred CCcEEEEEEeCCC-CccCEEEEeccCC---CCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 4568899998873 7999999998764 24899999999999999733999999999999999999999999999998
Q ss_pred CCCeEEEEEEcCCCCC
Q psy6070 1381 KQGLVELVLQPNTTEA 1396 (1454)
Q Consensus 1381 GqGSVsLVVrR~kses 1396 (1454)
+ +.|.|+|.+.....
T Consensus 84 ~-~~v~l~v~~~~~~~ 98 (103)
T 2dc2_A 84 R-GEIEFEVVYVALEH 98 (103)
T ss_dssp C-SEEEEEEEECC---
T ss_pred C-CcEEEEEEecCCcc
Confidence 7 79999998876543
No 38
>2g5m_B Neurabin-2; spinophilin, PDZ domain, CNS, synaptic transmission, protein binding; NMR {Rattus norvegicus}
Probab=99.38 E-value=2.3e-12 Score=116.37 Aligned_cols=92 Identities=32% Similarity=0.493 Sum_probs=79.9
Q ss_pred CceEEEEEEeCCCCCcccEEEEe---ccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHH
Q psy6070 1301 PTLVRVSFEKGPGKKSLGFSIVG---GVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIF 1377 (1454)
Q Consensus 1301 pEIRTVrLqKGpG~EGLGFSIRG---GkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLL 1377 (1454)
.+++.|+|.|+. .+|||+|.+ +.+......+++|..|.+||||+++|+|++||+|++|||+++.++++.+++.++
T Consensus 3 ~~~~~v~l~k~~--~glG~~l~~~~~~~~~~~~~~g~~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~ 80 (113)
T 2g5m_B 3 MELFPVELEKDS--EGLGISIIGMGAGADMGLEKLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVL 80 (113)
T ss_dssp CEEEEEECCCCS--SCCCCEEEEEECCCCSSSCCEEEEEEECCTTSHHHHHTCSCTTCBEEEETTEECSSCCHHHHHHHH
T ss_pred eEEEEEEEEeCC--CCCCEEEEecCCCCcCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 356788898876 699999999 544333456999999999999999999999999999999999999999999999
Q ss_pred hcCCCCeEEEEEEcCCCC
Q psy6070 1378 KKTKQGLVELVLQPNTTE 1395 (1454)
Q Consensus 1378 KqSGqGSVsLVVrR~kse 1395 (1454)
+..+ ..|.|+|.|....
T Consensus 81 ~~~g-~~v~l~v~R~~~~ 97 (113)
T 2g5m_B 81 RNTK-GRVRFMIGRERPG 97 (113)
T ss_dssp HHSC-SSCEEEEEECCCC
T ss_pred hcCC-CeEEEEEEeCCCC
Confidence 9986 7999999987644
No 39
>1x6d_A Interleukin-16; PDZ domain, lymphocyte chemoattractant factor (LCF), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=99.38 E-value=5.7e-12 Score=114.97 Aligned_cols=93 Identities=28% Similarity=0.510 Sum_probs=79.5
Q ss_pred CCceEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhc
Q psy6070 1300 EPTLVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKK 1379 (1454)
Q Consensus 1300 ppEIRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKq 1379 (1454)
.+.++.|.|.|.. ..+|||+|.++.+.. ..+++|..|.+||||+++|+|++||+|++|||+.+.+++|.+++.+|+.
T Consensus 13 ~~~~~~v~l~~~~-~~~lG~~i~g~~~~~--~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~ 89 (119)
T 1x6d_A 13 LDGIHVTILHKEE-GAGLGFSLAGGADLE--NKVITVHRVFPNGLASQEGTIQKGNEVLSINGKSLKGTTHHDALAILRQ 89 (119)
T ss_dssp CTTEEEEEEECCT-TSCCSEEEECCSSSS--CSSCEEEEECSSSHHHHHTSSCTTCBCCEETTEECSSCCHHHHHHHHHH
T ss_pred CCCeEEEEEEeCC-CCccCEEEeCCCCCC--CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 4567888898876 379999999987642 3489999999999999999999999999999999999999999999999
Q ss_pred CCCCeEEEEEEcCCCC
Q psy6070 1380 TKQGLVELVLQPNTTE 1395 (1454)
Q Consensus 1380 SGqGSVsLVVrR~kse 1395 (1454)
.+...+.|+|.|....
T Consensus 90 ~~~~~~~l~v~R~~~~ 105 (119)
T 1x6d_A 90 AREPRQAVIVTRKLTP 105 (119)
T ss_dssp TTSSSEEEEEEECCCS
T ss_pred CCCCeEEEEEEcCCCc
Confidence 8755666778776543
No 40
>1ufx_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.38 E-value=1.4e-12 Score=118.18 Aligned_cols=89 Identities=26% Similarity=0.357 Sum_probs=76.2
Q ss_pred eEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcC--
Q psy6070 1303 LVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKT-- 1380 (1454)
Q Consensus 1303 IRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqS-- 1380 (1454)
.+.|.|.|.. .+|||+|.++.+... ..++|..|.+|+||+++|+|++||+|++|||+++.+++|++++.+|+.+
T Consensus 7 ~~~v~l~k~~--~glG~~i~gg~~~~~--~~~~I~~v~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~ 82 (103)
T 1ufx_A 7 GTLVRVKKSA--ATLGIAIEGGANTRQ--PLPRIVTIQRGGSAHNCGQLKVGHVILEVNGLTLRGKEHREAARIIAEAFK 82 (103)
T ss_dssp SEEEEEECCS--SSCCEEEECBTTSSC--SSCEEEEECTTSHHHHHCSSCTTCBCCEETTEECTTCBHHHHHHHHHHHHH
T ss_pred eEEEEEEcCC--CcCCeEEECCCCCCC--CcEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhcc
Confidence 4678888876 699999999876522 2359999999999999999999999999999999999999999999985
Q ss_pred --CCCeEEEEEEcCCCC
Q psy6070 1381 --KQGLVELVLQPNTTE 1395 (1454)
Q Consensus 1381 --GqGSVsLVVrR~kse 1395 (1454)
....+.|+|.|....
T Consensus 83 ~~~~~~i~l~v~r~~~~ 99 (103)
T 1ufx_A 83 TKDRDYIDFLVTEFNSG 99 (103)
T ss_dssp CSSCSEEEEEECCCCCC
T ss_pred cCCCCeEEEEEEEcccC
Confidence 346889999886543
No 41
>1n7e_A AMPA receptor interacting protein GRIP; PDZ, protein binding; 1.50A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1n7f_A
Probab=99.38 E-value=6.4e-12 Score=110.79 Aligned_cols=89 Identities=25% Similarity=0.388 Sum_probs=77.5
Q ss_pred CceEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcC
Q psy6070 1301 PTLVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKT 1380 (1454)
Q Consensus 1301 pEIRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqS 1380 (1454)
..++.|.|.|.. .+|||+|.++.+. ..+++|..|.+|+||+++|+|+.||+|++|||+.+.++++++++.+|+..
T Consensus 4 ~~~~~v~l~~~~--~~lG~~i~~~~~~---~~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~ 78 (97)
T 1n7e_A 4 AIIYTVELKRYG--GPLGITISGTEEP---FDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMA 78 (97)
T ss_dssp CCEEEEEEECTT--SCCCEEEECCSST---TSCCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHTC
T ss_pred ceEEEEEEEeCC--CCcCEEEEcccCC---CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 567889998775 5799999987543 23899999999999999999999999999999999999999999999966
Q ss_pred CCCeEEEEEEcCCCC
Q psy6070 1381 KQGLVELVLQPNTTE 1395 (1454)
Q Consensus 1381 GqGSVsLVVrR~kse 1395 (1454)
+ ..|.|+|.|....
T Consensus 79 g-~~v~l~v~R~~~~ 92 (97)
T 1n7e_A 79 G-ETVTLKIKKQTDA 92 (97)
T ss_dssp C-SEEEEEEECCCCC
T ss_pred C-CeEEEEEEeCCCC
Confidence 5 7899999887544
No 42
>1wfg_A Regulating synaptic membrane exocytosis protein 2; PDZ domain, RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2css_A 1zub_A
Probab=99.38 E-value=2.5e-12 Score=120.92 Aligned_cols=80 Identities=33% Similarity=0.473 Sum_probs=72.1
Q ss_pred CCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcCC-CCeEEEEEEcC
Q psy6070 1314 KKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKTK-QGLVELVLQPN 1392 (1454)
Q Consensus 1314 ~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqSG-qGSVsLVVrR~ 1392 (1454)
..+|||+|.+|.+...+..++||..|.+||||+++|+|++||+|++|||+.+.+++|++++.+|+.++ +..|.|+|.|.
T Consensus 47 ~~~lG~~i~gg~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~ 126 (131)
T 1wfg_A 47 GAMLGLKVVGGKMTESGRLCAFITKVKKGSLADTVGHLRPGDEVLEWNGRLLQGATFEEVYNIILESKPEPQVELVVSRS 126 (131)
T ss_dssp CTTTTEEEEEEEECSSSCEEEEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTCCHHHHHHHHHHTSSSSEEEEEEEEE
T ss_pred CCCCCEEEecCccCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEEEEEcC
Confidence 37899999998876555669999999999999999999999999999999999999999999999973 46899999886
Q ss_pred C
Q psy6070 1393 T 1393 (1454)
Q Consensus 1393 k 1393 (1454)
.
T Consensus 127 g 127 (131)
T 1wfg_A 127 G 127 (131)
T ss_dssp C
T ss_pred C
Confidence 4
No 43
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=99.37 E-value=1.8e-12 Score=125.86 Aligned_cols=133 Identities=20% Similarity=0.226 Sum_probs=102.5
Q ss_pred CCCCCCceeccCCccCcc--CCCCCCchhhhcccCCCC-ccccccccccccccCCCCCCCCCceEEEEEEeCCCCCcccE
Q psy6070 1243 NATNSNQALTNLTDSVSN--TNQESPTSTELAKTSSGG-FGLLHSLLASRSAFRSRPQTCEPTLVRVSFEKGPGKKSLGF 1319 (1454)
Q Consensus 1243 SsTqGDRLLeVNGEDVSN--ASQEEpSSVqLLKkSSgS-VgLlhSiLASssvLPSRPrs~ppEIRTVrLqKGpG~EGLGF 1319 (1454)
.+..||+|+.+|+..+.. ..+.+. ..+++..... +.+.. ++. .......+.+.+.+... .+|||
T Consensus 63 ~L~~GD~Il~vng~~v~~~~~~~~~~--~~~~~~~~~~~v~l~v--------~R~--~~~~~~~~~v~l~~~~~-~~lG~ 129 (206)
T 3r0h_A 63 RLKIFDHICDINGTPIHVGSMTTLKV--HQLFHTTYEKAVTLTV--------FRA--DPPELEKFNVDLMKKAG-KELGL 129 (206)
T ss_dssp CCCTTCEEEEETTEECCGGGSCHHHH--HHHHHSCCSSEEEEEE--------ECC--SSCCEEEEEEEEECCTT-CCCCE
T ss_pred CCCCCCEEEEECCEEcCCCccCHHHH--HHHHHhcCCCceEEEE--------Eec--ccCCCcEEEEEEecCCC-CccCe
Confidence 389999999999999988 666555 4455544444 44432 111 11122346677777653 68999
Q ss_pred EEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcCCCCeEEEEEEcCCCC
Q psy6070 1320 SIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKTKQGLVELVLQPNTTE 1395 (1454)
Q Consensus 1320 SIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqSGqGSVsLVVrR~kse 1395 (1454)
.+.++. .+++|..|.+||+|+++|+|+.||+|++|||+.+.+++|++++.+|+..+ +.+.|+|.|....
T Consensus 130 ~~~~~~------~gv~V~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~-~~v~L~V~R~~~~ 198 (206)
T 3r0h_A 130 SLSPNE------IGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVCYALFKGAN-GKVSMEVTRPKPT 198 (206)
T ss_dssp EEEECS------SCEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCHHHHHHHHHTCC-SEEEEEEEEECCC
T ss_pred EEEcCC------ceEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CeEEEEEEeCCCC
Confidence 998653 37999999999999999999999999999999999999999999999986 7999999886543
No 44
>4e34_A Golgi-associated PDZ and coiled-coil motif-contai protein; PDZ-peptide complex, protein transport-inhibitor complex; 1.40A {Homo sapiens} PDB: 4e35_A
Probab=99.37 E-value=2.6e-12 Score=110.71 Aligned_cols=84 Identities=32% Similarity=0.504 Sum_probs=73.9
Q ss_pred ceEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhc-CCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcC
Q psy6070 1302 TLVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAES-GLLVEGDEILLFNNEPLQGRTHAEAITIFKKT 1380 (1454)
Q Consensus 1302 EIRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRD-GRLRVGDRILEVNGISVEGLTHEEAVSLLKqS 1380 (1454)
+++.|+|.|.+ ..+|||++.++.+. ..+++|..|.+||||+++ | |++||+|++|||+++.+++|++++.+|+..
T Consensus 2 ~~~~v~l~~~~-~~~lG~~i~~~~~~---~~~~~V~~V~~gspA~~~ag-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 76 (87)
T 4e34_A 2 PIRKVLLLKED-HEGLGISITGGKEH---GVPILISEIHPGQPADRCGG-LHVGDAILAVNGVNLRDTKHKEAVTILSQQ 76 (87)
T ss_dssp CCEEEEEECCT-TBCCCEEEEEEGGG---TEEEEEEEECTTSHHHHHSC-CCTTEEEEEETTEECTTCCHHHHHHHHHHC
T ss_pred CEEEEEEEECC-CCcccEEEEccCCC---CCCEEEEEECCCCHHHhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 45789999987 37999999998654 247999999999999995 7 999999999999999999999999999988
Q ss_pred CCCeEEEEEEc
Q psy6070 1381 KQGLVELVLQP 1391 (1454)
Q Consensus 1381 GqGSVsLVVrR 1391 (1454)
+ ..+.|+|..
T Consensus 77 ~-~~v~l~v~~ 86 (87)
T 4e34_A 77 R-GEIEFEVVY 86 (87)
T ss_dssp C-SEEEEEEEE
T ss_pred C-CeEEEEEEE
Confidence 6 688888864
No 45
>2cs5_A Tyrosine-protein phosphatase, non-receptor type 4; PDZ domain, ptpase, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.37 E-value=2.2e-12 Score=117.64 Aligned_cols=94 Identities=26% Similarity=0.450 Sum_probs=80.0
Q ss_pred CCCCceEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhc-CCCCCCCEEEeeCCeeCCCCCHHHHHHH
Q psy6070 1298 TCEPTLVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAES-GLLVEGDEILLFNNEPLQGRTHAEAITI 1376 (1454)
Q Consensus 1298 s~ppEIRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRD-GRLRVGDRILEVNGISVEGLTHEEAVSL 1376 (1454)
......+.|+|.|+.. .+|||+|.++.+. ..+++|..|.+||||+++ |.|++||+|++|||+.+.+++|.+++.+
T Consensus 11 ~~~~~~~~v~l~k~~~-~~~G~~l~gg~~~---~~~v~V~~V~~~spA~~a~gGL~~GD~Il~ing~~v~~~~~~~~~~~ 86 (119)
T 2cs5_A 11 IPHDNLVLIRMKPDEN-GRFGFNVKGGYDQ---KMPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLF 86 (119)
T ss_dssp CCSSCCEEEEECCCSS-SCCSEEEEEEGGG---TEEEEEEEECSSSTTTSSSSCCCTTCEEEEETTBCTTSSCHHHHHHH
T ss_pred cCCCCeEEEEEEeCCC-CCcCEEEecccCC---CCCeEEEEECCCCHHHHhhcCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 3456678999999873 6799999998764 347999999999999999 3399999999999999999999999999
Q ss_pred HhcCCC---CeEEEEEEcCCCC
Q psy6070 1377 FKKTKQ---GLVELVLQPNTTE 1395 (1454)
Q Consensus 1377 LKqSGq---GSVsLVVrR~kse 1395 (1454)
|+..+. ..|.|+|.|....
T Consensus 87 ~~~~~~~~~~~v~l~v~R~~~~ 108 (119)
T 2cs5_A 87 IKASCERHSGELMLLVRPNAVY 108 (119)
T ss_dssp HHHHHHCCSSCEEEEEECCCCC
T ss_pred HHhccccCCCEEEEEEEccccc
Confidence 998852 3899999987544
No 46
>1v62_A KIAA1719 protein; structural genomics, synaptic transmission, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.37 E-value=3.9e-12 Score=116.86 Aligned_cols=92 Identities=24% Similarity=0.302 Sum_probs=79.7
Q ss_pred CceEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcC
Q psy6070 1301 PTLVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKT 1380 (1454)
Q Consensus 1301 pEIRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqS 1380 (1454)
...+.|.|.|..+ .+|||.|.++.+.. ..+++|.+|.+||||+++|+|++||+|++|||+.+.+++|++++.+|+..
T Consensus 14 ~~~~~v~l~k~~~-~~lG~~i~~~~~~~--~~~~~V~~V~~~spA~~aG~l~~GD~Il~Ing~~v~~~~~~~~~~~l~~~ 90 (117)
T 1v62_A 14 SGPLMVEIVKTPG-SALGISLTTTSLRN--KSVITIDRIKPASVVDRSGALHPGDHILSIDGTSMEHCSLLEATKLLASI 90 (117)
T ss_dssp SSSEEEEEECCTT-CCCCCEEEEECCSS--SCEEEEEECCTTSHHHHHTCCCTTCBEEEETTEETTSCCHHHHHHHHHSC
T ss_pred CCcEEEEEEcCCC-CcccEEEEccCCCC--CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 3468899999873 78999999976532 23599999999999999999999999999999999999999999999976
Q ss_pred CCCeEEEEEEcCCCCC
Q psy6070 1381 KQGLVELVLQPNTTEA 1396 (1454)
Q Consensus 1381 GqGSVsLVVrR~kses 1396 (1454)
+ ..|.|+|.|.....
T Consensus 91 g-~~v~l~v~r~~~~~ 105 (117)
T 1v62_A 91 S-EKVRLEILPVPQSQ 105 (117)
T ss_dssp S-SEEEEEECCBTTBC
T ss_pred C-CeEEEEEEECCCCC
Confidence 5 79999999876543
No 47
>1m5z_A GRIP, AMPA receptor interacting protein; six beta-strands and two alpha-helices, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=99.37 E-value=6.3e-12 Score=109.11 Aligned_cols=87 Identities=25% Similarity=0.423 Sum_probs=77.1
Q ss_pred CCceEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhc
Q psy6070 1300 EPTLVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKK 1379 (1454)
Q Consensus 1300 ppEIRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKq 1379 (1454)
+.+++.|+|.|..+..+|||+|.++.+. .+++|..|.+||||+++| |+.||+|++|||+.+.++++.+++.+++.
T Consensus 4 ~~~~~~v~l~k~~~~~~~G~~~~~~~~~----~gv~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~~~~ 78 (91)
T 1m5z_A 4 PVELHKVTLYKDSGMEDFGFSVADGLLE----KGVYVKNIRPAGPGDLGG-LKPYDRLLQVNHVRTRDFDCCLVVPLIAE 78 (91)
T ss_dssp CCEEEEEEEECCTTCSSSSEEEEECTTS----SCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHT
T ss_pred CcceEEEEEEECCCCCCccEEEEeccCC----CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 4678899999986446899999987542 489999999999999999 99999999999999999999999999998
Q ss_pred CCCCeEEEEEEcC
Q psy6070 1380 TKQGLVELVLQPN 1392 (1454)
Q Consensus 1380 SGqGSVsLVVrR~ 1392 (1454)
.+ ..+.|+|.|.
T Consensus 79 ~g-~~v~l~v~R~ 90 (91)
T 1m5z_A 79 SG-NKLDLVISRN 90 (91)
T ss_dssp ST-TEEEEEEEEC
T ss_pred CC-CEEEEEEEeC
Confidence 75 7899999874
No 48
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=99.37 E-value=6.5e-12 Score=109.03 Aligned_cols=83 Identities=24% Similarity=0.486 Sum_probs=72.8
Q ss_pred eEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcCCC
Q psy6070 1303 LVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKTKQ 1382 (1454)
Q Consensus 1303 IRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqSGq 1382 (1454)
.+.|+|.|++ .+|||++.++.+. .+++|..|.+||||+++| |++||+|++|||+.+.++++.+++.+|+..+
T Consensus 4 ~r~v~l~r~~--~g~G~~~~~~~~~----~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~- 75 (91)
T 1g9o_A 4 PRLCCLEKGP--NGYGFHLHGEKGK----LGQYIRLVEPGSPAEKAG-LLAGDRLVEVNGENVEKETHQQVVSRIRAAL- 75 (91)
T ss_dssp CEEEEEECBT--TBCCEEEEECTTC----SSEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTCS-
T ss_pred cEEEEEEeCC--CcccEEEEecCCC----CCEEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCC-
Confidence 4789999987 5899999997642 489999999999999999 9999999999999999999999999999986
Q ss_pred CeEEEEEEcCC
Q psy6070 1383 GLVELVLQPNT 1393 (1454)
Q Consensus 1383 GSVsLVVrR~k 1393 (1454)
+.+.+++.+..
T Consensus 76 ~~~~~~~~~r~ 86 (91)
T 1g9o_A 76 NAVRLLVVDPE 86 (91)
T ss_dssp SEEEEEEECCC
T ss_pred CcEEEEEEcCC
Confidence 56666665543
No 49
>1ihj_A INAD; intermolecular disulfide bond, PDZ domain, signaling protein; 1.80A {Drosophila melanogaster} SCOP: b.36.1.1
Probab=99.37 E-value=3.6e-12 Score=111.94 Aligned_cols=91 Identities=32% Similarity=0.434 Sum_probs=78.4
Q ss_pred CceEEEEEEeCCCCCcccEEEEeccCCCC---CCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHH
Q psy6070 1301 PTLVRVSFEKGPGKKSLGFSIVGGVDSPK---GEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIF 1377 (1454)
Q Consensus 1301 pEIRTVrLqKGpG~EGLGFSIRGGkDQP~---Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLL 1377 (1454)
+.++.|+|.|.. ..+|||+|.++.+... ...+++|..|.++|||+++|+|++||+|++|||+.+.++++.+++.+|
T Consensus 4 e~~~~v~l~k~~-~~glG~~i~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l 82 (98)
T 1ihj_A 4 ELIHMVTLDKTG-KKSFGICIVRGEVKDSPNTKTTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLI 82 (98)
T ss_dssp CEEEEEEEECTT-SSSCCEEEEEEEECCSSSCCEEEEEEEEECTTSHHHHHCSCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred ceEEEEEEEeCC-CCCcCEEEeccccCCccccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 346789999965 3799999999876432 234899999999999999999999999999999999999999999999
Q ss_pred hcCCCCeEEEEEEcCC
Q psy6070 1378 KKTKQGLVELVLQPNT 1393 (1454)
Q Consensus 1378 KqSGqGSVsLVVrR~k 1393 (1454)
+..+ ..|.|+|.|..
T Consensus 83 ~~~g-~~v~l~v~R~g 97 (98)
T 1ihj_A 83 KEAD-FKIELEIQTFD 97 (98)
T ss_dssp HHSC-SEEEEEEEEC-
T ss_pred hcCC-CeEEEEEEeCC
Confidence 9965 79999998853
No 50
>2i04_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; PDZ, E6 binding, tumor suppressor, peptide binding protein; 2.15A {Mus musculus}
Probab=99.37 E-value=5.7e-12 Score=108.18 Aligned_cols=83 Identities=29% Similarity=0.507 Sum_probs=73.0
Q ss_pred EEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcCC-C
Q psy6070 1304 VRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKTK-Q 1382 (1454)
Q Consensus 1304 RTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqSG-q 1382 (1454)
++|+|.|+. .||||++.++.+. ..+++|..|.+||||+++|+|+.||+|++|||+.+.+++++++..+|+... +
T Consensus 2 ~~v~l~k~~--~g~G~~i~~~~~~---~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g 76 (85)
T 2i04_A 2 IHTKLRKSS--RGFGFTVVGGDEP---DEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIG 76 (85)
T ss_dssp EEEEEECBT--TBSSEEEEECCST---TBCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTSCTT
T ss_pred EEEEEEECC--CCCCEEEEcccCC---CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCC
Confidence 468888887 6899999997653 347999999999999999999999999999999999999999999999873 3
Q ss_pred CeEEEEEEc
Q psy6070 1383 GLVELVLQP 1391 (1454)
Q Consensus 1383 GSVsLVVrR 1391 (1454)
..+.|+|.|
T Consensus 77 ~~v~l~v~R 85 (85)
T 2i04_A 77 ASVDLELCR 85 (85)
T ss_dssp CEEEEEEEC
T ss_pred CeEEEEEEC
Confidence 688888865
No 51
>2ehr_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.37 E-value=2.6e-12 Score=116.86 Aligned_cols=93 Identities=30% Similarity=0.427 Sum_probs=80.1
Q ss_pred CceEEEEEEeCCCCCcccEEEEeccCCC------CCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHH
Q psy6070 1301 PTLVRVSFEKGPGKKSLGFSIVGGVDSP------KGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAI 1374 (1454)
Q Consensus 1301 pEIRTVrLqKGpG~EGLGFSIRGGkDQP------~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAV 1374 (1454)
...+.|.|.|+. ..+|||+|.++.+.. ....+++|..|.+||||+++|+|++||+|++|||+++.+++|.+++
T Consensus 14 ~~~~~v~l~k~~-~~~lG~~i~gg~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~ 92 (117)
T 2ehr_A 14 GPPRIVEIFREP-NVSLGISIVGGQTVIKRLKNGEELKGIFIKQVLEDSPAGKTNALKTGDKILEVSGVDLQNASHSEAV 92 (117)
T ss_dssp CCCEEEEECCCS-SSCCCEEECCCCSCCCSSCCCSCCCSEEEEEECSSSTTTSSCSCCTTCEEEEESSCBCTTCCHHHHH
T ss_pred CCCEEEEEEeCC-CCccCEEEeCCcccccccccCCCcCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHH
Confidence 345789999986 379999999987642 1235899999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCeEEEEEEcCCCC
Q psy6070 1375 TIFKKTKQGLVELVLQPNTTE 1395 (1454)
Q Consensus 1375 SLLKqSGqGSVsLVVrR~kse 1395 (1454)
.+|+..+ ..|.|+|.|....
T Consensus 93 ~~~~~~g-~~v~l~v~r~~~~ 112 (117)
T 2ehr_A 93 EAIKNAG-NPVVFIVQSLSST 112 (117)
T ss_dssp HHHHTSC-SSEEEEECCBSCC
T ss_pred HHHHcCC-CeEEEEEEECCCC
Confidence 9999976 7899999876543
No 52
>1qav_A Alpha-1 syntrophin (residues 77-171); beta-finger, heterodimer, membrane protein-oxidoreductase CO; 1.90A {Mus musculus} SCOP: b.36.1.1 PDB: 1z86_A 2pdz_A 2vrf_A
Probab=99.36 E-value=3.9e-12 Score=110.51 Aligned_cols=86 Identities=36% Similarity=0.447 Sum_probs=75.6
Q ss_pred ceEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcCC
Q psy6070 1302 TLVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKTK 1381 (1454)
Q Consensus 1302 EIRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqSG 1381 (1454)
..++|+|.|... .+|||++.++.+. ..+++|..|.++|||+++|.|++||+|++|||+.+.++++.+++.+++..+
T Consensus 4 ~~~~v~l~k~~~-~~lG~~i~~~~~~---~~g~~V~~V~~~spA~~aggl~~GD~I~~ing~~v~~~~~~~~~~~~~~~~ 79 (90)
T 1qav_A 4 QRRRVTVRKADA-GGLGISIKGGREN---KMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKTG 79 (90)
T ss_dssp SCEEEEEECCTT-TCCCEEEEEEGGG---TEEEEEEEECTTSHHHHTTCCCTTEEEEEETTEECTTCCHHHHHHHHHTCC
T ss_pred ccEEEEEEeCCC-CCcCEEEEcccCC---CCCEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 458899999763 7999999998654 248999999999999999449999999999999999999999999999986
Q ss_pred CCeEEEEEEcC
Q psy6070 1382 QGLVELVLQPN 1392 (1454)
Q Consensus 1382 qGSVsLVVrR~ 1392 (1454)
..+.|+|.|.
T Consensus 80 -~~v~l~v~r~ 89 (90)
T 1qav_A 80 -KEVVLEVKYM 89 (90)
T ss_dssp -SEEEEEEEEC
T ss_pred -CeEEEEEEEe
Confidence 7899998774
No 53
>2jil_A GRIP1 protein, glutamate receptor interacting protein-1; endoplasmic reticulum, postsynaptic membrane, membrane, MEMB protein; 1.5A {Homo sapiens}
Probab=99.36 E-value=4.1e-12 Score=111.43 Aligned_cols=89 Identities=28% Similarity=0.488 Sum_probs=76.8
Q ss_pred eEEEEEEeCCCCCcccEEEEeccCCC-CCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcCC
Q psy6070 1303 LVRVSFEKGPGKKSLGFSIVGGVDSP-KGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKTK 1381 (1454)
Q Consensus 1303 IRTVrLqKGpG~EGLGFSIRGGkDQP-~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqSG 1381 (1454)
.+.|+|.|+. .+|||+|.++.+.. ....+++|..|.+||||+++|+|++||+|++|||+.+.++++++++.+|+..+
T Consensus 4 ~~~v~l~k~~--~~lG~~i~~~~~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g 81 (97)
T 2jil_A 4 TVEVTLHKEG--NTFGFVIRGGAHDDRNKSRPVVITSVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSILKQCG 81 (97)
T ss_dssp EEEEEEECBT--TBCSEEEEEECCSCC--CEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHHSC
T ss_pred EEEEEEEeCC--CccCEEEeCcccCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 5678998875 69999999986532 12358999999999999999999999999999999999999999999999954
Q ss_pred CCeEEEEEEcCCC
Q psy6070 1382 QGLVELVLQPNTT 1394 (1454)
Q Consensus 1382 qGSVsLVVrR~ks 1394 (1454)
..+.|+|.|...
T Consensus 82 -~~v~l~v~R~~~ 93 (97)
T 2jil_A 82 -QEAALLIEYDVS 93 (97)
T ss_dssp -SEEEEEEEEECC
T ss_pred -CeEEEEEEeCCC
Confidence 799999988653
No 54
>3i4w_A Disks large homolog 4; alpha and beta protein, alternative splicing, cell junction, cell membrane, lipoprotein, membrane, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.36.1.1 PDB: 3k82_A* 3jxt_A* 2he2_A 1pdr_A 2i0i_A
Probab=99.36 E-value=5.5e-12 Score=111.55 Aligned_cols=86 Identities=34% Similarity=0.520 Sum_probs=76.9
Q ss_pred CCceEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhc
Q psy6070 1300 EPTLVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKK 1379 (1454)
Q Consensus 1300 ppEIRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKq 1379 (1454)
+...+.|+|.|+. .+|||+|.++.+. .+++|..|.+||||+++|+|+.||+|++|||+.+.++++.+++.+++.
T Consensus 9 ~~~~~~v~l~k~~--~glG~~~~~~~~~----~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~ 82 (104)
T 3i4w_A 9 PREPRRIVIHRGS--TGLGFNIVGGEXG----EGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKN 82 (104)
T ss_dssp CSSCEEEEEECBT--TBTSEEEEECC-C----CCEEEEEECTTSHHHHHCCCCTTEEEEEETTEECTTCCHHHHHHHHHT
T ss_pred CCccEEEEEEeCC--CccCEEEECCCCC----CCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 4556899999986 6899999998652 489999999999999999999999999999999999999999999999
Q ss_pred CCCCeEEEEEEcC
Q psy6070 1380 TKQGLVELVLQPN 1392 (1454)
Q Consensus 1380 SGqGSVsLVVrR~ 1392 (1454)
.+ ..+.|+|.|.
T Consensus 83 ~~-~~v~l~v~r~ 94 (104)
T 3i4w_A 83 AG-QTVTIIAQYK 94 (104)
T ss_dssp SC-SEEEEEEEEC
T ss_pred CC-CeEEEEEEEC
Confidence 76 7899999885
No 55
>3l4f_D SH3 and multiple ankyrin repeat domains protein 1; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}
Probab=99.36 E-value=4.9e-12 Score=119.32 Aligned_cols=91 Identities=15% Similarity=0.191 Sum_probs=78.1
Q ss_pred CceEEEEEEeCCCCCcccEEEEeccCCC---------CCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHH
Q psy6070 1301 PTLVRVSFEKGPGKKSLGFSIVGGVDSP---------KGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHA 1371 (1454)
Q Consensus 1301 pEIRTVrLqKGpG~EGLGFSIRGGkDQP---------~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHE 1371 (1454)
...+.|+|.|.. ..+|||+|.++.+.. ....+++|..|.+||||+++| |+.||+|++|||+.+.+++++
T Consensus 26 ~~~r~v~l~r~~-~~g~Gf~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~gspA~~aG-L~~GD~Il~Vng~~v~~~~~~ 103 (132)
T 3l4f_D 26 IKEKTVLLQKKD-SEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAG-LRMGDFLIEVNGQNVVKVGHR 103 (132)
T ss_dssp CCCCEEEEECCT-TSCCCEEEEEECCSSCCSCCCCCTTSCCSEEEEEECTTSGGGGGT-CCTTCEEEEESSSBCTTSCHH
T ss_pred CCCEEEEEEECC-CCcEeEEEeccCCCCccccccccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHH
Confidence 445789999865 379999999987631 112379999999999999999 999999999999999999999
Q ss_pred HHHHHHhcCCCCeEEEEEEcCCC
Q psy6070 1372 EAITIFKKTKQGLVELVLQPNTT 1394 (1454)
Q Consensus 1372 EAVSLLKqSGqGSVsLVVrR~ks 1394 (1454)
+++.+|+..+ ..|.|+|.+...
T Consensus 104 ~~~~~l~~~g-~~v~l~v~~~~~ 125 (132)
T 3l4f_D 104 QVVNMIRQGG-NTLMVKVVMVTR 125 (132)
T ss_dssp HHHHHHHHTT-TEEEEEEECCCC
T ss_pred HHHHHHHcCC-CEEEEEEEECCC
Confidence 9999999976 799999988654
No 56
>3nfk_A Tyrosine-protein phosphatase non-receptor type 4; PDZ-PDZ-binding site complex, protein binding; 1.43A {Homo sapiens} SCOP: b.36.1.1 PDB: 3nfl_A 2vph_A
Probab=99.36 E-value=2.5e-12 Score=114.79 Aligned_cols=89 Identities=26% Similarity=0.466 Sum_probs=77.4
Q ss_pred CCCceEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcC-CCCCCCEEEeeCCeeCCCCCHHHHHHHH
Q psy6070 1299 CEPTLVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESG-LLVEGDEILLFNNEPLQGRTHAEAITIF 1377 (1454)
Q Consensus 1299 ~ppEIRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDG-RLRVGDRILEVNGISVEGLTHEEAVSLL 1377 (1454)
....++.|.|.|+. ..+|||.+.++.+. ..+++|..|.+||||+++| +|++||+|++|||+++.+++|.+++.+|
T Consensus 14 ~~~~~~~v~l~~~~-~~~~G~~~~gg~~~---~~~~~V~~V~~~spA~~aG~rL~~GD~Il~ing~~v~~~~~~~~~~~i 89 (107)
T 3nfk_A 14 PHDNLVLIRMKPDE-NGRFGFNVKGGYDQ---KMPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFI 89 (107)
T ss_dssp --CCCEEEEECCCT-TSCCCEEEEEEGGG---TEEEEEEEECTTSHHHHSSSCCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred CCCCEEEEEEEcCC-CCCCCEEEEccCCC---CCCeEEEEECCCCchHHcCCccCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 34668899999987 37999999998654 2479999999999999999 6999999999999999999999999999
Q ss_pred hcCCC---CeEEEEEEc
Q psy6070 1378 KKTKQ---GLVELVLQP 1391 (1454)
Q Consensus 1378 KqSGq---GSVsLVVrR 1391 (1454)
+..+. ..|.|+|.|
T Consensus 90 ~~~~~~~~~~v~l~v~r 106 (107)
T 3nfk_A 90 KASCERHSGELMLLVRP 106 (107)
T ss_dssp HCGGGSBTTBEEEEEEC
T ss_pred HhccccCCcEEEEEEEc
Confidence 99862 389999987
No 57
>2r4h_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; transferase, STRU genomics, structural genomics consortium, SGC, ATP-binding; HET: HIS; 2.05A {Homo sapiens}
Probab=99.36 E-value=5.2e-12 Score=114.99 Aligned_cols=88 Identities=33% Similarity=0.520 Sum_probs=78.0
Q ss_pred CCceEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhc
Q psy6070 1300 EPTLVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKK 1379 (1454)
Q Consensus 1300 ppEIRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKq 1379 (1454)
+.+.+.|.|.|+. .+|||+|.++.+. ..+++|..|.+||||+++|+|++||+|++|||+.+.++++.+++.+|+.
T Consensus 22 ~~~~~~v~l~~~~--~glG~~l~~~~~~---~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 96 (112)
T 2r4h_A 22 SMDFYTVELERGA--KGFGFSLRGGREY---NMDLYVLRLAEDGPAERSGKMRIGDEILEINGETTKNMKHSRAIELIKN 96 (112)
T ss_dssp -CCEEEEEEECBT--TBTSEEEEECGGG---TCCEEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHHT
T ss_pred CCceEEEEEEcCC--CccCEEEeccccC---CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 4678899999886 6899999998653 2489999999999999999999999999999999999999999999998
Q ss_pred CCCCeEEEEEEcCC
Q psy6070 1380 TKQGLVELVLQPNT 1393 (1454)
Q Consensus 1380 SGqGSVsLVVrR~k 1393 (1454)
.+ ..|.|+|.|..
T Consensus 97 ~g-~~v~l~v~R~~ 109 (112)
T 2r4h_A 97 GG-RRVRLFLKRGE 109 (112)
T ss_dssp TT-TEEEEEEECCE
T ss_pred CC-CeEEEEEEeCC
Confidence 75 78999998753
No 58
>2daz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.36 E-value=4.3e-12 Score=117.08 Aligned_cols=91 Identities=38% Similarity=0.541 Sum_probs=80.9
Q ss_pred CCCceEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHh
Q psy6070 1299 CEPTLVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFK 1378 (1454)
Q Consensus 1299 ~ppEIRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLK 1378 (1454)
.+.+++.|.|.|+. .+|||+|.++.+.. ..+++|..|.+||||+++|+|++||+|++|||+.+.++++.+++.+|+
T Consensus 22 ~~~~~~~v~l~k~~--~glG~~l~~~~~~~--~~gv~V~~V~~~spA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~ 97 (124)
T 2daz_A 22 LPGELHIIELEKDK--NGLGLSLAGNKDRS--RMSIFVVGINPEGPAAADGRMRIGDELLEINNQILYGRSHQNASAIIK 97 (124)
T ss_dssp SSSEEEEEEEECCS--SCCCEEEECBSSTT--SCCEEEEEECTTSHHHHHTCCCTTCEECEESSCBCTTSCHHHHHHHHH
T ss_pred CCCceEEEEEEeCC--CccCEEEeccCCCC--cCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 34678899999986 69999999986642 358999999999999999999999999999999999999999999999
Q ss_pred cCCCCeEEEEEEcCCC
Q psy6070 1379 KTKQGLVELVLQPNTT 1394 (1454)
Q Consensus 1379 qSGqGSVsLVVrR~ks 1394 (1454)
..+ ..|.|+|.|...
T Consensus 98 ~~~-~~v~l~v~R~~~ 112 (124)
T 2daz_A 98 TAP-SKVKLVFIRNED 112 (124)
T ss_dssp HSC-SEEEEEEEECTT
T ss_pred cCC-CeEEEEEEeCCC
Confidence 986 699999988654
No 59
>3hpk_A Protein interacting with PRKCA 1; oxidized, PDZ domain, kinase, protein binding; 2.20A {Rattus norvegicus} PDB: 3hpm_A
Probab=99.36 E-value=5.7e-12 Score=116.08 Aligned_cols=87 Identities=25% Similarity=0.407 Sum_probs=77.6
Q ss_pred ceEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcCC
Q psy6070 1302 TLVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKTK 1381 (1454)
Q Consensus 1302 EIRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqSG 1381 (1454)
..+.|+|.|... .+|||+|.++.+. ..+++|..|.+||||+++|+|+.||+|++|||+++.+++|++++.+|+..+
T Consensus 19 ~~~~v~l~k~~~-~~lG~~i~gg~~~---~~~~~V~~v~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~ 94 (125)
T 3hpk_A 19 VPGKVTLQKDAQ-NLIGISIGGGAQY---CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVK 94 (125)
T ss_dssp EEEEEEEECCTT-SCCCEEEEECSSC---CSSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHSC
T ss_pred CCeEEEEEeCCC-CCcCEEEeccCCC---CCCEEEEEeCCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 347889999873 7899999998764 247999999999999999999999999999999999999999999999987
Q ss_pred CCeEEEEEEcCC
Q psy6070 1382 QGLVELVLQPNT 1393 (1454)
Q Consensus 1382 qGSVsLVVrR~k 1393 (1454)
+.|.|+|.|..
T Consensus 95 -~~v~l~v~r~~ 105 (125)
T 3hpk_A 95 -GEVTIHYNKLQ 105 (125)
T ss_dssp -SEEEEEEEEEC
T ss_pred -CeEEEEEEECC
Confidence 68999998843
No 60
>4amh_A Disks large homolog 1; permutation, protein folding, structural protein; 2.30A {Homo sapiens}
Probab=99.35 E-value=4.7e-12 Score=114.56 Aligned_cols=79 Identities=41% Similarity=0.606 Sum_probs=72.2
Q ss_pred CcccEEEEeccCCCC--CCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcCCCCeEEEEEEcC
Q psy6070 1315 KSLGFSIVGGVDSPK--GEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKTKQGLVELVLQPN 1392 (1454)
Q Consensus 1315 EGLGFSIRGGkDQP~--Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqSGqGSVsLVVrR~ 1392 (1454)
.+|||+|.||.+... +..+++|..|.+||||+++|+|++||+|++|||+++.++++++++.+|+..+ +.|.|+|.|.
T Consensus 13 ~~~Gf~i~gG~~~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~-~~v~l~v~R~ 91 (106)
T 4amh_A 13 KGLGFSIAGGVGNQHWPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNNVALEEVTHEEAVTALKNTS-DFVYLKVAKP 91 (106)
T ss_dssp CCSCEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHSCC-SEEEEEEECC
T ss_pred CccCEEEEeccCCccccCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhCCC-CeEEEEEEeC
Confidence 689999999987643 4558999999999999999999999999999999999999999999999986 7999999997
Q ss_pred CC
Q psy6070 1393 TT 1394 (1454)
Q Consensus 1393 ks 1394 (1454)
..
T Consensus 92 ~~ 93 (106)
T 4amh_A 92 GS 93 (106)
T ss_dssp SS
T ss_pred CC
Confidence 54
No 61
>2dkr_A LIN-7 homolog B; LIN-7B, PDZ, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.35 E-value=4.9e-12 Score=109.89 Aligned_cols=85 Identities=31% Similarity=0.572 Sum_probs=75.5
Q ss_pred eEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcCCC
Q psy6070 1303 LVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKTKQ 1382 (1454)
Q Consensus 1303 IRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqSGq 1382 (1454)
.+.|+|.|.. .+|||+|.++.+. ..+++|..|.+++||+++|.|++||+|++|||+.+.++++++++.+|+..+
T Consensus 6 ~r~v~l~k~~--~glG~~l~~~~~~---~~~~~V~~V~~~spA~~aGgl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~- 79 (93)
T 2dkr_A 6 SGVVELPKTD--EGLGFNIMGGKEQ---NSPIYISRVIPGGVADRHGGLKRGDQLLSVNGVSVEGEQHEKAVELLKAAQ- 79 (93)
T ss_dssp SCEEEEECCT--TCCCEEEECSSSS---SCCCEEEEECTTSHHHHHCCCCTTCBEEEETTEECTTSCHHHHHHHHHHCC-
T ss_pred CEEEEEEeCC--CCccEEEecccCC---CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC-
Confidence 4688999986 7999999987654 348999999999999999669999999999999999999999999999886
Q ss_pred CeEEEEEEcCC
Q psy6070 1383 GLVELVLQPNT 1393 (1454)
Q Consensus 1383 GSVsLVVrR~k 1393 (1454)
..|.|+|.|..
T Consensus 80 ~~v~l~v~r~~ 90 (93)
T 2dkr_A 80 GSVKLVVRSGP 90 (93)
T ss_dssp SEEEEEECCCC
T ss_pred CcEEEEEEeCC
Confidence 68999998754
No 62
>2eno_A Synaptojanin-2-binding protein; mitochondrial outer membrane protein 25, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.35 E-value=5e-12 Score=115.79 Aligned_cols=92 Identities=36% Similarity=0.568 Sum_probs=80.4
Q ss_pred CceEEEEEEeCCCCCcccEEEEeccCCCC--CCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHh
Q psy6070 1301 PTLVRVSFEKGPGKKSLGFSIVGGVDSPK--GEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFK 1378 (1454)
Q Consensus 1301 pEIRTVrLqKGpG~EGLGFSIRGGkDQP~--Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLK 1378 (1454)
...+.|.|.|+. .+|||+|.++.+.+. ...+++|..|.+|+||+++|+|++||+|++|||+.+.+++|.+++.+|+
T Consensus 16 ~~~~~v~l~r~~--~~lG~~i~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~ 93 (120)
T 2eno_A 16 VTEEEINLTRGP--SGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFR 93 (120)
T ss_dssp EEEEEEEEECCS--SSCSEEEECCTTTCSSSSCCSEEEEEECSSSHHHHSCCSCTTCEEEEETTEECCSCCHHHHHHHHH
T ss_pred CceEEEEEEECC--CCCCEEEecccCCccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 456889999987 699999999876421 2458999999999999999999999999999999999999999999999
Q ss_pred cCCCCeEEEEEEcCCCC
Q psy6070 1379 KTKQGLVELVLQPNTTE 1395 (1454)
Q Consensus 1379 qSGqGSVsLVVrR~kse 1395 (1454)
..+ ..|.|+|.|....
T Consensus 94 ~~g-~~v~l~v~R~~~~ 109 (120)
T 2eno_A 94 NAG-YAVSLRVQHRLQV 109 (120)
T ss_dssp HHC-SEEEEEEEEEEEC
T ss_pred cCC-CeEEEEEEeCCcC
Confidence 875 7899999886543
No 63
>2opg_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=99.35 E-value=1.1e-11 Score=108.90 Aligned_cols=88 Identities=34% Similarity=0.526 Sum_probs=78.1
Q ss_pred ceEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcCC
Q psy6070 1302 TLVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKTK 1381 (1454)
Q Consensus 1302 EIRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqSG 1381 (1454)
+.+.|.|.|+. .+|||+|.++.+... .+++|..|.+||||+++|+|++||+|++|||+.+.++++.+++.+++..+
T Consensus 4 ~~~~v~l~~~~--~~lG~~l~~~~~~~~--~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~ 79 (98)
T 2opg_A 4 CETTIEISKGR--TGLGLSIVGGSDTLL--GAIIIHEVYEEGAACKDGRLWAGDQILEVNGIDLRKATHDEAINVLRQTP 79 (98)
T ss_dssp EEEEEEEECBT--TBTCEEEEECTTSTT--CSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTCC
T ss_pred CEEEEEEEECC--CcccEEEecCCCCCC--CCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 45789999986 689999999876421 38999999999999999999999999999999999999999999999886
Q ss_pred CCeEEEEEEcCCC
Q psy6070 1382 QGLVELVLQPNTT 1394 (1454)
Q Consensus 1382 qGSVsLVVrR~ks 1394 (1454)
..|.|+|.|...
T Consensus 80 -~~v~l~v~R~~~ 91 (98)
T 2opg_A 80 -QRVRLTLYRDEA 91 (98)
T ss_dssp -SEEEEEEEECSS
T ss_pred -CeEEEEEEcCCC
Confidence 799999988654
No 64
>1uep_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.34 E-value=2e-12 Score=115.58 Aligned_cols=89 Identities=25% Similarity=0.481 Sum_probs=77.6
Q ss_pred CceEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcC
Q psy6070 1301 PTLVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKT 1380 (1454)
Q Consensus 1301 pEIRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqS 1380 (1454)
.+.+.|.|.|.. .+|||+|.++.+. ..+++|..|.+||||+++|+|++||+|++|||+.+.++++++++.+|+..
T Consensus 8 ~~~~~v~l~~~~--~g~G~~i~~g~~~---~~~~~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~ 82 (103)
T 1uep_A 8 YKELDVHLRRME--SGFGFRILGGDEP---GQPILIGAVIAMGSADRDGRLHPGDELVYVDGIPVAGKTHRYVIDLMHHA 82 (103)
T ss_dssp EEEECCEEESSS--SSCCEEECCCCST---TSCCBEEEECTTSTTGGGTCCCTTCEEEEETTEECTTSCHHHHHHHHHHH
T ss_pred ceEEEEEEEeCC--CccCEEEeeecCC---CCCeEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 456778899865 6899999987654 34899999999999999999999999999999999999999999999987
Q ss_pred C-CCeEEEEEEcCCC
Q psy6070 1381 K-QGLVELVLQPNTT 1394 (1454)
Q Consensus 1381 G-qGSVsLVVrR~ks 1394 (1454)
. ...|.|+|.|...
T Consensus 83 ~~g~~v~l~v~R~~~ 97 (103)
T 1uep_A 83 ARNGQVNLTVRRKVL 97 (103)
T ss_dssp HHHTEEEEEEEEECC
T ss_pred CCCCcEEEEEEeCCC
Confidence 2 2699999988654
No 65
>1nf3_C PAR-6B; semi-CRIB motif, switch I and II, PDZ domain, GTPase binding domain, signaling protein; HET: GNP; 2.10A {Mus musculus} SCOP: b.36.1.1 PDB: 2lc6_A 1ry4_A 1x8s_A 2lc7_A 1rzx_A
Probab=99.34 E-value=4.8e-12 Score=117.82 Aligned_cols=95 Identities=26% Similarity=0.385 Sum_probs=80.4
Q ss_pred CCCCceEEEEEEeCCCCCcccEEEEeccCCC---C---CCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHH
Q psy6070 1298 TCEPTLVRVSFEKGPGKKSLGFSIVGGVDSP---K---GEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHA 1371 (1454)
Q Consensus 1298 s~ppEIRTVrLqKGpG~EGLGFSIRGGkDQP---~---Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHE 1371 (1454)
..+..++.|+|.|.+...+|||+|.++.+.. . ...+++|..|.+||||+++|+|++||+|++|||+.+.+++|+
T Consensus 25 ~~~~~~r~v~l~k~~~~~~lG~~i~~~~~~~~~~~g~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~ 104 (128)
T 1nf3_C 25 ILPETHRRVRLCKYGTEKPLGFYIRDGSSVRVTPHGLEKVPGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLD 104 (128)
T ss_dssp TSCTTCEEEEECCSSTTSCCCEEEEEEEEEEEETTEEEEEEEEEEEEECTTCHHHHHTCCCTTCEEEEETTEESTTCCHH
T ss_pred cCCCccEEEEEEECCCCCCccEEEEccccccccccccCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHH
Confidence 3456778999999853378999999875421 0 123799999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCeEEEEEEcCC
Q psy6070 1372 EAITIFKKTKQGLVELVLQPNT 1393 (1454)
Q Consensus 1372 EAVSLLKqSGqGSVsLVVrR~k 1393 (1454)
+++.+|+..+ +.|.|+|.|..
T Consensus 105 ~~~~~l~~~~-~~v~l~v~r~~ 125 (128)
T 1nf3_C 105 QVTDMMIANS-RNLIITVRPAN 125 (128)
T ss_dssp HHHHHHHHTT-TSEEEEEECCC
T ss_pred HHHHHHHcCC-CeEEEEEEECC
Confidence 9999999886 68999998865
No 66
>2dlu_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.34 E-value=7.9e-12 Score=112.54 Aligned_cols=87 Identities=29% Similarity=0.490 Sum_probs=77.3
Q ss_pred CceEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcC
Q psy6070 1301 PTLVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKT 1380 (1454)
Q Consensus 1301 pEIRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqS 1380 (1454)
..++.|.|.|.. .+|||.|.++.+ .+++|..|.+||+|+++|+|+.||+|++|||+.+.++++++++.+|+..
T Consensus 14 ~~~~~v~l~~~~--~~lG~~l~~~~~-----~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~ 86 (111)
T 2dlu_A 14 GHVEEVELINDG--SGLGFGIVGGKT-----SGVVVRTIVPGGLADRDGRLQTGDHILKIGGTNVQGMTSEQVAQVLRNC 86 (111)
T ss_dssp SEEEEEEEECCS--SCCCEEEECCSS-----SSBEEEEECTTSSHHHHTCCCSSCEEEEESSCCCTTSCHHHHHHHHHHH
T ss_pred CceEEEEEEeCC--CccCEEEeccCC-----CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 346889999876 689999998754 3899999999999999999999999999999999999999999999987
Q ss_pred CCCeEEEEEEcCCCC
Q psy6070 1381 KQGLVELVLQPNTTE 1395 (1454)
Q Consensus 1381 GqGSVsLVVrR~kse 1395 (1454)
+ ..|.|+|.|....
T Consensus 87 g-~~v~l~v~R~~~~ 100 (111)
T 2dlu_A 87 G-NSVRMLVARDPAG 100 (111)
T ss_dssp C-SEEEEEEEESCTT
T ss_pred C-CeEEEEEEeCCCC
Confidence 5 7899999886544
No 67
>1wg6_A Hypothetical protein (riken cDNA 2810455B10); structural genomics, PDZ domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.36.1.1 PDB: 2koh_A 2k1z_A 2k20_A
Probab=99.33 E-value=1.6e-12 Score=121.40 Aligned_cols=91 Identities=25% Similarity=0.522 Sum_probs=75.1
Q ss_pred eEEEEEEeCCCCCcccEEEEeccCCCC-CCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcC-
Q psy6070 1303 LVRVSFEKGPGKKSLGFSIVGGVDSPK-GEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKT- 1380 (1454)
Q Consensus 1303 IRTVrLqKGpG~EGLGFSIRGGkDQP~-Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqS- 1380 (1454)
.+.|.|.|.. ..+|||+|.++.+... +..++||..|.+||||+++|+|++||+|++|||+++.+++|++++.+|+.+
T Consensus 26 ~~~v~l~k~~-~~glG~~i~~~~~~~~~~~~gi~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~ 104 (127)
T 1wg6_A 26 TLEIPLNDSG-SAGLGVSLKGNKSRETGTDLGIFIKSIIHGGAAFKDGRLRMNDQLIAVNGETLLGKSNHEAMETLRRSM 104 (127)
T ss_dssp EEEEECSSST-TTCCCCEEEEEEETTTTEEEEEEEEECCSSSSTHHHHTSCSCCBEEEETTEESTTSCHHHHHHHHHHHH
T ss_pred EEEEEEeeCC-CCccCeEEecccCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhh
Confidence 4556665444 3799999999865311 234899999999999999999999999999999999999999999999976
Q ss_pred -----CCCeEEEEEEcCCC
Q psy6070 1381 -----KQGLVELVLQPNTT 1394 (1454)
Q Consensus 1381 -----GqGSVsLVVrR~ks 1394 (1454)
....|.|+|.|...
T Consensus 105 ~~~g~~~~~v~l~v~R~~~ 123 (127)
T 1wg6_A 105 SMEGNIRGMIQLVILRRSG 123 (127)
T ss_dssp HHHHHHTCEEEEEEEECSC
T ss_pred ccccCCCCEEEEEEEeCCC
Confidence 13699999998654
No 68
>2ego_A General receptor for phosphoinositides 1- associated scaffold protein; PDZ domain, ligand-free, protein binding; 1.80A {Rattus norvegicus} PDB: 2egn_A 2egk_A 2pnt_A
Probab=99.33 E-value=1.2e-11 Score=109.19 Aligned_cols=89 Identities=27% Similarity=0.406 Sum_probs=74.8
Q ss_pred CceEEEEEEeCCCCCcccEEEEe-ccCC---CCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHH
Q psy6070 1301 PTLVRVSFEKGPGKKSLGFSIVG-GVDS---PKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITI 1376 (1454)
Q Consensus 1301 pEIRTVrLqKGpG~EGLGFSIRG-GkDQ---P~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSL 1376 (1454)
...+.|+|.|.+ ..+|||+|.+ +... .....+++|..|.+||||+++| |++||+|++|||+.+.++++++++.+
T Consensus 3 ~~~r~v~l~k~~-~~~~Gf~l~~~g~~~~~~~~~~~~~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~ 80 (96)
T 2ego_A 3 QQRKVLTLEKGD-NQTFGFEIQTYGLHHREEQRVEMVTFVARVHESSPAQLAG-LTPGDTIASVNGLNVEGIRHREIVDI 80 (96)
T ss_dssp CCEEEEEEECCT-TCCCSEEEEEEEC-------CCEEEEEEEECTTCHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHH
T ss_pred CccEEEEEEeCC-CCCccEEEEeccccccCCCCCCCCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHH
Confidence 346889999997 3799999997 2110 0113489999999999999999 99999999999999999999999999
Q ss_pred HhcCCCCeEEEEEEcC
Q psy6070 1377 FKKTKQGLVELVLQPN 1392 (1454)
Q Consensus 1377 LKqSGqGSVsLVVrR~ 1392 (1454)
|+..+ +.|.|+|.+.
T Consensus 81 l~~~~-~~v~l~v~~~ 95 (96)
T 2ego_A 81 IKASG-NVLRLETLYG 95 (96)
T ss_dssp HHHTT-TEEEEEEECC
T ss_pred HHhCC-CeEEEEEEEC
Confidence 99986 6999999764
No 69
>2jre_A C60-1 PDZ domain peptide; de novo protein; NMR {Synthetic}
Probab=99.33 E-value=9.2e-12 Score=111.36 Aligned_cols=93 Identities=27% Similarity=0.418 Sum_probs=77.9
Q ss_pred CCceEEEEEEeCCCCCcccEEEEeccCCCC--CCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHH
Q psy6070 1300 EPTLVRVSFEKGPGKKSLGFSIVGGVDSPK--GEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIF 1377 (1454)
Q Consensus 1300 ppEIRTVrLqKGpG~EGLGFSIRGGkDQP~--Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLL 1377 (1454)
+.+.+.|.|.+..+..+|||+|.++.+... ...+++|..|.+||||+++|+|++||+|++|||+.+.++++++++.+|
T Consensus 10 ~~~~~~v~l~r~~~~~~lG~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l 89 (108)
T 2jre_A 10 GFSLYSVELFREKDTSSLGISISGMRDQSTTGEATGIYVKSLIPGSAAALDGRIEPNDKILRVDDVNVQGMAQSDVVEVL 89 (108)
T ss_dssp SCEEEEEEEECCSTTSCCSEEEECCCCCSCSSCCCCCEEEEECTTSHHHHHSSCCSSEEEEEETTEECTTSCHHHHHHHH
T ss_pred CcEEEEEEEEecCCCCCcCEEEEcccCCCCCCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 345678888632224799999999765422 245899999999999999999999999999999999999999999999
Q ss_pred hcCCCCeEEEEEEcCC
Q psy6070 1378 KKTKQGLVELVLQPNT 1393 (1454)
Q Consensus 1378 KqSGqGSVsLVVrR~k 1393 (1454)
+..+ ..|.|+|.|..
T Consensus 90 ~~~g-~~v~l~v~R~~ 104 (108)
T 2jre_A 90 RNAG-NPVRLLLIRRL 104 (108)
T ss_dssp HHHC-SEEEEEEEECC
T ss_pred HcCC-CeEEEEEEeCC
Confidence 9865 79999998865
No 70
>2djt_A Unnamed protein product; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.33 E-value=1.1e-11 Score=110.31 Aligned_cols=90 Identities=28% Similarity=0.443 Sum_probs=78.3
Q ss_pred CceEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcC
Q psy6070 1301 PTLVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKT 1380 (1454)
Q Consensus 1301 pEIRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqS 1380 (1454)
.+.+.|.|.++. .+|||+|.++.+.. +..+++|..|.+|+||+++|+|+.||+|++|||+.+.++++.+++.+|+..
T Consensus 10 ~~~~~v~l~~~~--~g~G~~l~~~~~~~-~~~~v~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 86 (104)
T 2djt_A 10 SGHFSVELVRGY--AGFGLTLGGGRDVA-GDTPLAVRGLLKDGPAQRCGRLEVGDLVLHINGESTQGLTHAQAVERIRAG 86 (104)
T ss_dssp CCCEEEEEECCS--SSCCEEEECCEETT-EECCCEEEEECTTCHHHHHCSCCTTCBEEEETTEECTTCCHHHHHHHHHHT
T ss_pred CceEEEEEEeCC--CCccEEEEeccCCC-CCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 456889999987 69999999976531 134899999999999999999999999999999999999999999999986
Q ss_pred CCCeEEEEEEcCCC
Q psy6070 1381 KQGLVELVLQPNTT 1394 (1454)
Q Consensus 1381 GqGSVsLVVrR~ks 1394 (1454)
+ ..|.|+|.|...
T Consensus 87 g-~~v~l~v~R~g~ 99 (104)
T 2djt_A 87 G-PQLHLVIRRPLS 99 (104)
T ss_dssp C-SEEEEEECCCCC
T ss_pred C-CeEEEEEEECCC
Confidence 5 799999988654
No 71
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=99.32 E-value=7.6e-12 Score=109.08 Aligned_cols=85 Identities=21% Similarity=0.365 Sum_probs=72.9
Q ss_pred ceEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcCC
Q psy6070 1302 TLVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKTK 1381 (1454)
Q Consensus 1302 EIRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqSG 1381 (1454)
..+.|.|.|+. .+|||.+.++.+. .+++|..|.+||||+++| |+.||+|++|||+.+.+++|++++.+|+..+
T Consensus 5 ~~r~v~l~~~~--~~~G~~l~~~~~~----~~~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~ 77 (95)
T 3r68_A 5 QPRVVVIKKGS--NGYGFYLRAGPEQ----KGQIIKDIEPGSPAEAAG-LKNNDLVVAVNGKSVEALDHDGVVEMIRKGG 77 (95)
T ss_dssp CCEEEEEECBT--TBCSCEEEEC--C----CSEEEECCCTTSHHHHHT-CCTTEEEEEETTEECTTCCHHHHHHHHHTTT
T ss_pred CcEEEEEecCC--CcccEEEEecCCC----CCEEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 44789999976 6999999987543 379999999999999999 9999999999999999999999999999976
Q ss_pred CCeEEEEEEcCCC
Q psy6070 1382 QGLVELVLQPNTT 1394 (1454)
Q Consensus 1382 qGSVsLVVrR~ks 1394 (1454)
+.+.+++.|...
T Consensus 78 -~~~~~~~~r~~~ 89 (95)
T 3r68_A 78 -DQTTLLVLDKEL 89 (95)
T ss_dssp -TEEEEEEEECC-
T ss_pred -CeEEEEEECCcc
Confidence 677777776543
No 72
>2uzc_A Human pdlim5, PDZ and LIM domain 5; metal-binding, enigma homolog, phosphorylation, signaling PR LIM domain, PDZ domain; 1.5A {Homo sapiens}
Probab=99.32 E-value=1.2e-11 Score=106.71 Aligned_cols=83 Identities=31% Similarity=0.460 Sum_probs=73.1
Q ss_pred eEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcCCC
Q psy6070 1303 LVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKTKQ 1382 (1454)
Q Consensus 1303 IRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqSGq 1382 (1454)
.+.|.| +++ .+|||++.+|.+. ..+++|..|.+||||+++| |+.||+|++|||+.+.+++|++++.+++..+
T Consensus 4 ~~~v~l-~~~--~~~G~~l~~g~~~---~~~~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~g- 75 (88)
T 2uzc_A 4 NYSVSL-VGP--APWGFRLQGGKDF---NMPLTISSLKDGGKAAQAN-VRIGDVVLSIDGINAQGMTHLEAQNKIKGCT- 75 (88)
T ss_dssp EEEEEE-ESS--SCCCEEEEEEGGG---TEEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTCC-
T ss_pred EEEEEE-cCC--CcccEEEECcCCC---CCCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCC-
Confidence 467788 555 5899999998764 3479999999999999999 9999999999999999999999999999875
Q ss_pred CeEEEEEEcCC
Q psy6070 1383 GLVELVLQPNT 1393 (1454)
Q Consensus 1383 GSVsLVVrR~k 1393 (1454)
..+.|+|.|..
T Consensus 76 ~~v~l~v~R~g 86 (88)
T 2uzc_A 76 GSLNMTLQRES 86 (88)
T ss_dssp SEEEEEEECCC
T ss_pred CeEEEEEEeCC
Confidence 79999998864
No 73
>2csj_A TJP2 protein; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.32 E-value=6.6e-12 Score=114.53 Aligned_cols=90 Identities=26% Similarity=0.525 Sum_probs=77.5
Q ss_pred ceEEEEEEeCCCCCcccEEEEeccCCCC---CCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHh
Q psy6070 1302 TLVRVSFEKGPGKKSLGFSIVGGVDSPK---GEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFK 1378 (1454)
Q Consensus 1302 EIRTVrLqKGpG~EGLGFSIRGGkDQP~---Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLK 1378 (1454)
+.+.|.|.|++ ..+|||+|.++.+.+. +..+++|..|.+||||+ +| |++||+|++|||+++.+++|.+++.+|+
T Consensus 14 ~~~~v~l~k~~-~~glG~~i~gg~~~~~~~~~~~gv~V~~V~~~spA~-~g-L~~GD~I~~Vng~~v~~~~~~~~~~~l~ 90 (117)
T 2csj_A 14 EQYTVTLQKDS-KRGFGIAVSGGRDNPHFENGETSIVISDVLPGGPAD-GL-LQENDRVVMVNGTPMEDVLHSFAVQQLR 90 (117)
T ss_dssp EEEEEEEECCS-SSTTCEEEECCSSCCCCSSCCCBCEEEEECTTSSHH-HH-BCTTCEEEEESSCBCBTCCHHHHHHHHH
T ss_pred eEEEEEEEECC-CCccCEEEeCCcCCccccCCCCCEEEEEECCCCccc-cc-CCCCCEEEEECCEECCCcCHHHHHHHHh
Confidence 45788999987 3799999999876532 35689999999999997 66 9999999999999999999999999999
Q ss_pred cCCCCeEEEEEEcCCCC
Q psy6070 1379 KTKQGLVELVLQPNTTE 1395 (1454)
Q Consensus 1379 qSGqGSVsLVVrR~kse 1395 (1454)
..+ ..|.|+|.|....
T Consensus 91 ~~~-~~v~l~v~R~~~~ 106 (117)
T 2csj_A 91 KSG-KIAAIVVKRPRKV 106 (117)
T ss_dssp HSC-SEEEEEEEEEEEC
T ss_pred cCC-CeEEEEEEECCcc
Confidence 976 7999999886543
No 74
>2koj_A Partitioning defective 3 homolog; PDZ domain, structural genomics, alternative splicing, cell cycle, cell division, cell junction, coiled coil; NMR {Mus musculus} PDB: 2ogp_A
Probab=99.32 E-value=2e-11 Score=109.66 Aligned_cols=93 Identities=30% Similarity=0.546 Sum_probs=78.7
Q ss_pred CceEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcC
Q psy6070 1301 PTLVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKT 1380 (1454)
Q Consensus 1301 pEIRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqS 1380 (1454)
...+.+.|.++. .+|||+|.++.+...+..+++|..|.+||||+++|+|++||+|++|||+.+.++++++++.+|+..
T Consensus 10 ~~~~~~~l~~~~--~glG~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 87 (111)
T 2koj_A 10 GKRLNIQLKKGT--EGLGFSITSRDVTIGGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLAGKSQEEVVSLLRST 87 (111)
T ss_dssp CEEEEEEEECBT--TBTCEEEEECSCSSSSSSCEEEEEECSSSHHHHHCSSCTTCEEEEETTEECTTSCHHHHHHHHHHC
T ss_pred CcEEEEEEEECC--CccCEEEEeccCCCCCCcCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 345677888776 699999998765433345899999999999999999999999999999999999999999999986
Q ss_pred C-CCeEEEEEEcCCCC
Q psy6070 1381 K-QGLVELVLQPNTTE 1395 (1454)
Q Consensus 1381 G-qGSVsLVVrR~kse 1395 (1454)
. +..|.|+|.|....
T Consensus 88 ~~g~~v~l~v~R~~~~ 103 (111)
T 2koj_A 88 KMEGTVSLLVFRQEEA 103 (111)
T ss_dssp CCSSEEEEEEEECCCC
T ss_pred CCCCeEEEEEEeCCCC
Confidence 2 36899999887543
No 75
>2v90_A PDZ domain-containing protein 3; membrane, protein-binding; 2.00A {Homo sapiens}
Probab=99.31 E-value=1.4e-11 Score=108.15 Aligned_cols=88 Identities=23% Similarity=0.394 Sum_probs=76.7
Q ss_pred eEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcCCC
Q psy6070 1303 LVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKTKQ 1382 (1454)
Q Consensus 1303 IRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqSGq 1382 (1454)
.+.|+|.|+. .+|||++.+..+. .+..+++|..|.+||||+++| |+.||+|++|||+.+.++++++++.+|+..+
T Consensus 4 ~r~v~l~k~~--~~~G~~l~~~~~~-~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g- 78 (96)
T 2v90_A 4 PRCLHLEKGP--QGFGFLLREEKGL-DGRPGQFLWEVDPGLPAKKAG-MQAGDRLVAVAGESVEGLGHEETVSRIQGQG- 78 (96)
T ss_dssp CEEEEEECBT--TBSCEEEEEEECT-TSCEEEEEEEECTTSHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHHTTT-
T ss_pred CEEEEEEeCC--CcccEEEEeccCC-CCCCCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCC-
Confidence 4789999987 5999999984332 224589999999999999999 9999999999999999999999999999974
Q ss_pred CeEEEEEEcCCCC
Q psy6070 1383 GLVELVLQPNTTE 1395 (1454)
Q Consensus 1383 GSVsLVVrR~kse 1395 (1454)
..|.|+|.|....
T Consensus 79 ~~v~l~v~r~~~~ 91 (96)
T 2v90_A 79 SCVSLTVVDPEAD 91 (96)
T ss_dssp TEEEEEEECCCTT
T ss_pred CEEEEEEECCCCc
Confidence 7999999987644
No 76
>3qe1_A Sorting nexin-27, G protein-activated inward RECT potassium channel 3 chimera; PDZ domain, PDZ binding, GIRK3 regulation, early endosomes; 1.68A {Rattus norvegicus} SCOP: b.36.1.0 PDB: 3qdo_A 3qgl_A
Probab=99.31 E-value=2e-11 Score=109.00 Aligned_cols=90 Identities=24% Similarity=0.387 Sum_probs=76.1
Q ss_pred ceEEEEEEeCCCCCcccEEEEeccCCCC------C---CccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHH
Q psy6070 1302 TLVRVSFEKGPGKKSLGFSIVGGVDSPK------G---EMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAE 1372 (1454)
Q Consensus 1302 EIRTVrLqKGpG~EGLGFSIRGGkDQP~------G---d~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEE 1372 (1454)
..+.|.|.|+. .+|||+|.++.+... + ...+||..|.+||||+++| |+.||+|++|||+.+.++++++
T Consensus 6 ~~r~v~l~k~~--~g~G~~l~~~~~~~~~~~~~~~~~~~p~~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~ 82 (107)
T 3qe1_A 6 SPRVVRIVKSE--SGYGFNVRGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAG-VRKGDRILEVNGVNVEGATHKQ 82 (107)
T ss_dssp CCEEEEEECBT--TBTCEEEECCSSSCCCCEESSSSEESCCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHH
T ss_pred CcEEEEEEECC--CCCCEEEEcccccCCcceeccccccCCceEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHH
Confidence 35789999987 589999999854311 0 2246799999999999999 9999999999999999999999
Q ss_pred HHHHHhcCCCCeEEEEEEcCCCC
Q psy6070 1373 AITIFKKTKQGLVELVLQPNTTE 1395 (1454)
Q Consensus 1373 AVSLLKqSGqGSVsLVVrR~kse 1395 (1454)
++.+|+..+ ..+.|+|.|....
T Consensus 83 ~~~~l~~~g-~~v~l~v~r~~~~ 104 (107)
T 3qe1_A 83 VVDLIRAGE-KELILTVLSVESE 104 (107)
T ss_dssp HHHHHHHCS-SEEEEEEECSSCC
T ss_pred HHHHHHcCC-CEEEEEEEcCCCC
Confidence 999999876 7999999986543
No 77
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=99.31 E-value=1.1e-11 Score=108.98 Aligned_cols=81 Identities=27% Similarity=0.399 Sum_probs=69.7
Q ss_pred EEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcCCCCe
Q psy6070 1305 RVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKTKQGL 1384 (1454)
Q Consensus 1305 TVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqSGqGS 1384 (1454)
.|.|.+....++|||.+.+ +++|.+|.+||||+++|+|+.||+|++|||+++.+++|++++++|+..+ +.
T Consensus 3 ~v~l~~~~~~~~~G~~~~~---------gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~i~~~~-~~ 72 (88)
T 3e17_A 3 GVLLMKSRANEEYGLRLGS---------QIFVKEMTRTGLATKDGNLHEGDIILKINGTVTENMSLTDARKLIEKSR-GK 72 (88)
T ss_dssp EEEEECBTTBCCCCEEEEE---------EEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHTT-TE
T ss_pred EEEEEeCCCCCCCCEEEeC---------CEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-Ce
Confidence 4566664444789999976 5999999999999999999999999999999999999999999999997 79
Q ss_pred EEEEEEcCCCC
Q psy6070 1385 VELVLQPNTTE 1395 (1454)
Q Consensus 1385 VsLVVrR~kse 1395 (1454)
|.|+|.+....
T Consensus 73 v~L~v~~~~~~ 83 (88)
T 3e17_A 73 LQLVVLRDLEH 83 (88)
T ss_dssp EEEEECCC---
T ss_pred EEEEEeCCCcc
Confidence 99999876543
No 78
>1va8_A Maguk P55 subfamily member 5; PDZ domain, palmitoylated 5, PALS1 protein, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.31 E-value=1.8e-11 Score=111.55 Aligned_cols=87 Identities=29% Similarity=0.465 Sum_probs=76.6
Q ss_pred CCceEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhc
Q psy6070 1300 EPTLVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKK 1379 (1454)
Q Consensus 1300 ppEIRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKq 1379 (1454)
...++.|+|.|..+ .+|||.+.+.. .+++|..|.+||||+++|.|+.||+|++|||+.+.++++++++.+|+.
T Consensus 23 ~~~~~~v~l~k~~~-~~lG~~i~~~~------~gv~V~~V~~~spA~~aGll~~GD~I~~vng~~v~~~~~~~~~~~l~~ 95 (113)
T 1va8_A 23 GETVKIVRIEKARD-IPLGATVRNEM------DSVIISRIVKGGAAEKSGLLHEGDEVLEINGIEIRGKDVNEVFDLLSD 95 (113)
T ss_dssp TEECEEEEEEECTT-CCCCEEEEECS------SSEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHH
T ss_pred CCceEEEEEEeCCC-CceeEEEEeCC------CCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 34678899999973 59999998862 379999999999999999559999999999999999999999999998
Q ss_pred CCCCeEEEEEEcCCC
Q psy6070 1380 TKQGLVELVLQPNTT 1394 (1454)
Q Consensus 1380 SGqGSVsLVVrR~ks 1394 (1454)
.+ +.|.|+|.|...
T Consensus 96 ~~-~~v~l~v~r~~~ 109 (113)
T 1va8_A 96 MH-GTLTFVLIPSSG 109 (113)
T ss_dssp CC-EEEEEEEECCCC
T ss_pred CC-CeEEEEEEECCc
Confidence 86 689999988654
No 79
>1wi2_A Riken cDNA 2700099C19; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.30 E-value=1.7e-11 Score=109.79 Aligned_cols=86 Identities=33% Similarity=0.577 Sum_probs=76.3
Q ss_pred ceEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcCC
Q psy6070 1302 TLVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKTK 1381 (1454)
Q Consensus 1302 EIRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqSG 1381 (1454)
..+.|.|.|.++ .+|||.|.++.+. ..+++|..|.+|+||+++| |++||+|++|||+.+.++++++++.+|+. +
T Consensus 15 ~~~~v~l~k~~~-~~lG~~~~~~~~~---~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~-~ 88 (104)
T 1wi2_A 15 LPRIVTLKKPPG-AQLGFNIRGGKAS---QLGIFISKVIPDSDAHRAG-LQEGDQVLAVNDVDFQDIEHSKAVEILKT-A 88 (104)
T ss_dssp CCEEEEECCCTT-CCCSEEEECCSSS---CCCCEEEEECTTSHHHHHT-CCTTCEEEEETTEECSSCCHHHHHHHHHH-S
T ss_pred CCEEEEEEeCCC-CCccEEEEcccCC---CCCEEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhC-C
Confidence 457899999874 6899999997654 2489999999999999999 99999999999999999999999999999 4
Q ss_pred CCeEEEEEEcCCC
Q psy6070 1382 QGLVELVLQPNTT 1394 (1454)
Q Consensus 1382 qGSVsLVVrR~ks 1394 (1454)
..+.|+|.|...
T Consensus 89 -~~v~l~v~r~~~ 100 (104)
T 1wi2_A 89 -REISMRVRFFSG 100 (104)
T ss_dssp -SSEEEEEECCCC
T ss_pred -CEEEEEEEECCC
Confidence 689999988643
No 80
>2dm8_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.30 E-value=1.5e-11 Score=111.18 Aligned_cols=91 Identities=35% Similarity=0.546 Sum_probs=79.4
Q ss_pred CCceEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhc
Q psy6070 1300 EPTLVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKK 1379 (1454)
Q Consensus 1300 ppEIRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKq 1379 (1454)
+.+.+.|.|.++. .+|||+|.++.+... .+++|..|.+||||+++|+|+.||+|++|||+.+.++++++++.+|+.
T Consensus 15 ~~~~~~v~l~~~~--~glG~~l~~~~~~~~--~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~ 90 (116)
T 2dm8_A 15 PGQEMIIEISKGR--SGLGLSIVGGKDTPL--NAIVIHEVYEEGAAARDGRLWAGDQILEVNGVDLRNSSHEEAITALRQ 90 (116)
T ss_dssp TTSCEEEEEECCS--SCCCCCCBCCTTSSC--SSEECCCCCSSSHHHHHTCCCTTCEEEEETTEECSSSCHHHHHHHHHT
T ss_pred CCCEEEEEEEECC--CcccEEEeCCCCCCc--CCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 3456889998876 699999998765421 389999999999999999999999999999999999999999999998
Q ss_pred CCCCeEEEEEEcCCCC
Q psy6070 1380 TKQGLVELVLQPNTTE 1395 (1454)
Q Consensus 1380 SGqGSVsLVVrR~kse 1395 (1454)
.+ ..|.|+|.|....
T Consensus 91 ~~-~~v~l~v~R~~~~ 105 (116)
T 2dm8_A 91 TP-QKVRLVVYRDEAH 105 (116)
T ss_dssp CC-SEEEEEEECCSSC
T ss_pred CC-CeEEEEEEeCCcc
Confidence 86 7999999886544
No 81
>2ejy_A 55 kDa erythrocyte membrane protein; GPC, maguk, PDZ, membrane protein; NMR {Homo sapiens} PDB: 2ev8_A
Probab=99.30 E-value=1.3e-11 Score=112.48 Aligned_cols=83 Identities=27% Similarity=0.372 Sum_probs=74.6
Q ss_pred eEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcCCC
Q psy6070 1303 LVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKTKQ 1382 (1454)
Q Consensus 1303 IRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqSGq 1382 (1454)
++.|.|.|..+ ++|||++....+ .+++|.+|.+||||+++|+|++||+|++|||+++.++++++++.+|+..+
T Consensus 13 ~~~v~l~K~~~-~~lG~~l~~~~~-----~gv~V~~V~~gspA~~aG~L~~GD~Il~ING~~v~~~~~~~~~~~l~~~~- 85 (97)
T 2ejy_A 13 VRLIQFEKVTE-EPMGICLKLNEK-----QSCTVARILHGGMIHRQGSLHVGDEILEINGTNVTNHSVDQLQKAMKETK- 85 (97)
T ss_dssp CEEEEEEECSS-SCCSEEEEECTT-----CCEEEEEECSSSHHHHHTCCCTTCEEEEETTBCCCSSCSHHHHHHHHHCC-
T ss_pred cEEEEEEeCCC-CCeeEEEEeCCC-----CCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-
Confidence 47899999875 899999987543 38999999999999999999999999999999999999999999999986
Q ss_pred CeEEEEEEcC
Q psy6070 1383 GLVELVLQPN 1392 (1454)
Q Consensus 1383 GSVsLVVrR~ 1392 (1454)
+.|.|+|.+.
T Consensus 86 ~~v~L~V~~~ 95 (97)
T 2ejy_A 86 GMISLKVIPN 95 (97)
T ss_dssp EEEEEEEECC
T ss_pred CeEEEEEEEC
Confidence 7899998864
No 82
>2yt7_A Amyloid beta A4 precursor protein-binding family A member 3; neuron-specific X11L2 protein, neuronal MUNC18-1-interacting protein 3, MINT-3; NMR {Homo sapiens}
Probab=99.30 E-value=2.4e-11 Score=108.56 Aligned_cols=92 Identities=24% Similarity=0.253 Sum_probs=76.3
Q ss_pred CCceEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhc
Q psy6070 1300 EPTLVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKK 1379 (1454)
Q Consensus 1300 ppEIRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKq 1379 (1454)
+++++.|+|.|..+ .+|||+|.+.... ....+++|..|.+||||+++|.|++||+|++|||+.+.++++++++.+|+.
T Consensus 7 ~~~~~~v~l~k~~g-~~lG~~i~~~~~~-~~~~~~~V~~V~~~spA~~~ggl~~GD~I~~Ing~~v~~~~~~~~~~~l~~ 84 (101)
T 2yt7_A 7 GDNCREVHLEKRRG-EGLGVALVESGWG-SLLPTAVIANLLHGGPAERSGALSIGDRLTAINGTSLVGLPLAACQAAVRE 84 (101)
T ss_dssp TCCCEEEEEECCTT-CCCCEEEEECCCS-SSSCCEEEEEECTTSTTGGGSSCCTTCEEEEESSCBCTTSCHHHHHHHHHH
T ss_pred CCceEEEEEEeCCC-CccCEEEEeCCCC-CCccCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 46678999998874 6899999863221 122369999999999999976699999999999999999999999999998
Q ss_pred C-CCCeEEEEEEcCC
Q psy6070 1380 T-KQGLVELVLQPNT 1393 (1454)
Q Consensus 1380 S-GqGSVsLVVrR~k 1393 (1454)
. .+..|.|+|.|..
T Consensus 85 ~~~g~~v~l~v~R~~ 99 (101)
T 2yt7_A 85 TKSQTSVTLSIVHCP 99 (101)
T ss_dssp TTTSSEEEEEECCCC
T ss_pred CCCCCeEEEEEEeCC
Confidence 4 2378999998753
No 83
>2dmz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.29 E-value=1.2e-11 Score=114.23 Aligned_cols=93 Identities=25% Similarity=0.400 Sum_probs=79.4
Q ss_pred CCceEEEEEEeCCCCCcccEEEEeccCCCC--CCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHH
Q psy6070 1300 EPTLVRVSFEKGPGKKSLGFSIVGGVDSPK--GEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIF 1377 (1454)
Q Consensus 1300 ppEIRTVrLqKGpG~EGLGFSIRGGkDQP~--Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLL 1377 (1454)
+.+.+.|.|.+.. ..+|||+|.++.+... ...+++|..|.+||||+++|+|++||+|++|||+.+.++++++++.+|
T Consensus 13 ~~~~~~v~l~~~~-~~~lG~~i~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l 91 (129)
T 2dmz_A 13 LFETYNVELVRKD-GQSLGIRIVGYVGTSHTGEASGIYVKSVIPGSAAYHNGHIQVNDKIVAVDGVNIQGFANHDVVEVL 91 (129)
T ss_dssp CEEEEEEEECCCT-TCCCCEEEEEECCCSSSCCCCEEEEEEECTTSHHHHHTCCCSSCBEEEETTBCCTTCCHHHHHHHH
T ss_pred CCcEEEEEEEeCC-CCCcCEEEEeecCCcccCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 4556788887654 3799999999765432 345899999999999999999999999999999999999999999999
Q ss_pred hcCCCCeEEEEEEcCCC
Q psy6070 1378 KKTKQGLVELVLQPNTT 1394 (1454)
Q Consensus 1378 KqSGqGSVsLVVrR~ks 1394 (1454)
+..+ ..|.|+|.|...
T Consensus 92 ~~~~-~~v~l~v~R~~~ 107 (129)
T 2dmz_A 92 RNAG-QVVHLTLVRRKT 107 (129)
T ss_dssp HHCC-SSEEEEEEEESS
T ss_pred HcCC-CeEEEEEEeCCc
Confidence 9954 799999988654
No 84
>2la8_A Inactivation-NO-after-potential D protein, KON-TI peptide; peptide binding protein; NMR {Drosophila melanogaster}
Probab=99.29 E-value=1.9e-11 Score=111.53 Aligned_cols=86 Identities=24% Similarity=0.367 Sum_probs=75.3
Q ss_pred ceEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcCC
Q psy6070 1302 TLVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKTK 1381 (1454)
Q Consensus 1302 EIRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqSG 1381 (1454)
+.++|.|.|..+ .+|||++.+. ..|++|..|.+||||+++|+|++||+|++|||+++.++++.+++.+++..+
T Consensus 2 ~~~~v~L~k~~~-~glG~~i~~~------~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~~~~ 74 (106)
T 2la8_A 2 EKFNVDLMKKAG-KELGLSLSPN------EIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVCYALFKGAN 74 (106)
T ss_dssp EEEEEEECCBSS-STTCCEEEEC------SSSEEEEECCTTSCHHHHTTCCTTCEEEEESSCBCSSSCHHHHHHHHHSCB
T ss_pred eEEEEEEEeCCC-CccCEEEEeC------CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhCCC
Confidence 357889986653 7899999883 238999999999999999999999999999999999999999999999986
Q ss_pred CCeEEEEEEcCCCC
Q psy6070 1382 QGLVELVLQPNTTE 1395 (1454)
Q Consensus 1382 qGSVsLVVrR~kse 1395 (1454)
+.|.|+|.|....
T Consensus 75 -~~v~l~v~R~~~~ 87 (106)
T 2la8_A 75 -GKVSMEVTRPKPG 87 (106)
T ss_dssp -SCEEEEEEECCSC
T ss_pred -CeEEEEEEeCCCC
Confidence 6899999986543
No 85
>2f5y_A Regulator of G-protein signalling 3 isoform 1; PDZ domain, RGS-3, human, structural genomics, structural GE consortium, SGC, signaling protein; 2.39A {Homo sapiens} SCOP: b.36.1.1
Probab=99.28 E-value=2.1e-11 Score=106.66 Aligned_cols=83 Identities=18% Similarity=0.311 Sum_probs=73.0
Q ss_pred ceEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcCC
Q psy6070 1302 TLVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKTK 1381 (1454)
Q Consensus 1302 EIRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqSG 1381 (1454)
.++.|+|.|+. .+|||.+.+. .+++|..|.+||||+++| |+.||+|++|||+.+.++++.+++.+|+..+
T Consensus 3 ~~r~v~l~~~~--~g~G~~l~~~-------~~~~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~ 72 (91)
T 2f5y_A 3 RYRQITIPRGK--DGFGFTICCD-------SPVRVQAVDSGGPAERAG-LQQLDTVLQLNERPVEHWKCVELAHEIRSCP 72 (91)
T ss_dssp EEEEEEEECBT--TBTSEEEECS-------SSCEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTCS
T ss_pred ceEEEEEEeCC--CCccEEEecC-------CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 45789999987 6899999874 269999999999999999 9999999999999999999999999999876
Q ss_pred CCeEEEEEEcCCCC
Q psy6070 1382 QGLVELVLQPNTTE 1395 (1454)
Q Consensus 1382 qGSVsLVVrR~kse 1395 (1454)
..+.|+|.|....
T Consensus 73 -~~v~l~v~R~~~~ 85 (91)
T 2f5y_A 73 -SEIILLVWRMVPQ 85 (91)
T ss_dssp -SEEEEEEEECC--
T ss_pred -CeEEEEEEeCCCC
Confidence 6899999886543
No 86
>1uew_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.28 E-value=3.7e-11 Score=109.21 Aligned_cols=92 Identities=22% Similarity=0.350 Sum_probs=77.7
Q ss_pred CceEEEEEEeCCCCCcccEEEEeccCCCC-CC---ccEEEEEeCCCChhhh-cCCCCCCCEEEeeCCeeCCCCCHHHHHH
Q psy6070 1301 PTLVRVSFEKGPGKKSLGFSIVGGVDSPK-GE---MGIFVKTIFPHGQAAE-SGLLVEGDEILLFNNEPLQGRTHAEAIT 1375 (1454)
Q Consensus 1301 pEIRTVrLqKGpG~EGLGFSIRGGkDQP~-Gd---~GIFISRVIPGGPADR-DGRLRVGDRILEVNGISVEGLTHEEAVS 1375 (1454)
.+.+.|.|.|... .+|||+|.++.+... +. .+++|..|.+||||++ +| |++||+|++|||+.+.+++|++++.
T Consensus 9 ~~~~~v~l~~~~~-~~lGf~l~~~~~~~~~g~~~~~~~~V~~V~~~spA~~~ag-L~~GD~I~~ing~~v~~~~~~~~~~ 86 (114)
T 1uew_A 9 LQTSDVVIHRKEN-EGFGFVIISSLNRPESGSTITVPHKIGRIIDGSPADRCAK-LKVGDRILAVNGQSIINMPHADIVK 86 (114)
T ss_dssp CCCEEEEEECCTT-SCCCEEEECCCCSCCSSCCSCCSCEEEEECTTCTTGGGSS-CCTTCBEEEETTBCTTTSCHHHHHH
T ss_pred ccceEEEEEECCC-CCCCEEEEeecccCCCCcccccCeEEEEECCCChHHHhCC-CCCCCEEEEECCEECCCCCHHHHHH
Confidence 4557899998753 799999999765422 11 2679999999999999 77 9999999999999999999999999
Q ss_pred HHhcCCCCeEEEEEEcCCCC
Q psy6070 1376 IFKKTKQGLVELVLQPNTTE 1395 (1454)
Q Consensus 1376 LLKqSGqGSVsLVVrR~kse 1395 (1454)
+|+..+ ..|.|+|.|....
T Consensus 87 ~l~~~g-~~v~l~v~r~~~~ 105 (114)
T 1uew_A 87 LIKDAG-LSVTLRIIPQEEL 105 (114)
T ss_dssp HHHHTT-TEEEEEECCCSCC
T ss_pred HHHcCC-CeEEEEEEeCCcC
Confidence 999864 7999999987544
No 87
>2pa1_A PDZ and LIM domain protein 2; PDZ domain, structural genomics, structural genomics consort metal binding protein; 1.70A {Homo sapiens} PDB: 3pdv_A
Probab=99.28 E-value=2.5e-11 Score=104.87 Aligned_cols=83 Identities=29% Similarity=0.430 Sum_probs=72.2
Q ss_pred EEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcCCCCe
Q psy6070 1305 RVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKTKQGL 1384 (1454)
Q Consensus 1305 TVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqSGqGS 1384 (1454)
.+++.+.. ..+|||+|.++.+. ..+++|..|.+||||+++| |++||+|++|||+.+.+++++++..+|+... ..
T Consensus 3 ~~~v~~~~-~~~lG~~l~~~~~~---~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~-~~ 76 (87)
T 2pa1_A 3 ALTVDVAG-PAPWGFRITGGRDF---HTPIMVTKVAERGKAKDAD-LRPGDIIVAINGESAEGMLHAEAQSKIRQSP-SP 76 (87)
T ss_dssp EEEEEECS-SSCCSEEEEEEGGG---TEEEEEEEECSSSHHHHTT-CCTTCEEEEETTEESTTCCHHHHHHHHHTCC-SS
T ss_pred EEEEEECC-CCccCEEEecccCC---CCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCC-Ce
Confidence 44555443 37899999998764 2489999999999999999 9999999999999999999999999999987 79
Q ss_pred EEEEEEcCC
Q psy6070 1385 VELVLQPNT 1393 (1454)
Q Consensus 1385 VsLVVrR~k 1393 (1454)
|.|+|.|..
T Consensus 77 v~l~v~R~~ 85 (87)
T 2pa1_A 77 LRLQLDRIT 85 (87)
T ss_dssp EEEEEEECC
T ss_pred EEEEEEecC
Confidence 999998864
No 88
>2vsp_A PDZ domain-containing protein 1; membrane, cytoplasm, phosphoprotein, transport protein, CAsp; 2.60A {Homo sapiens} PDB: 2eej_A
Probab=99.28 E-value=6.5e-12 Score=109.62 Aligned_cols=85 Identities=19% Similarity=0.237 Sum_probs=73.2
Q ss_pred ceEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcCC
Q psy6070 1302 TLVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKTK 1381 (1454)
Q Consensus 1302 EIRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqSG 1381 (1454)
..+.|+|.|++ .+|||++.++.+. .+++|..|.+||||+++| |++||+|++|||+.+.+++++++..+|+..+
T Consensus 3 ~pr~v~l~k~~--~~~G~~l~~~~~~----~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g 75 (91)
T 2vsp_A 3 KPKLCRLAKGE--NGYGFHLNAIRGL----PGSFIKEVQKGGPADLAG-LEDEDVIIEVNGVNVLDEPYEKVVDRIQSSG 75 (91)
T ss_dssp CEEEEEEECBT--TBTSCCCBCCTTC----SCCBC-CCCTTSHHHHTT-CCTTCEEEEETTEECTTSCHHHHHHHHTTSC
T ss_pred CcEEEEEEeCC--CcccEEEEeccCC----CCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 45889999987 5899999876542 479999999999999999 9999999999999999999999999999984
Q ss_pred CCeEEEEEEcCCC
Q psy6070 1382 QGLVELVLQPNTT 1394 (1454)
Q Consensus 1382 qGSVsLVVrR~ks 1394 (1454)
..|.|+|.|...
T Consensus 76 -~~v~l~v~r~~~ 87 (91)
T 2vsp_A 76 -KNVTLLVCGKKA 87 (91)
T ss_dssp -SEEEEEEEC---
T ss_pred -CEEEEEEEeCCc
Confidence 799999998654
No 89
>1rgw_A ZAsp protein; PDZ, cypher, oracle, muscle, Z-DISK, sarcomere, structural protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 1wjl_A
Probab=99.28 E-value=1.7e-11 Score=105.01 Aligned_cols=82 Identities=30% Similarity=0.434 Sum_probs=71.2
Q ss_pred EEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcCCCC
Q psy6070 1304 VRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKTKQG 1383 (1454)
Q Consensus 1304 RTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqSGqG 1383 (1454)
+.|+|. ++ .+|||+|.++.+. ..+++|..|.+||||+++| |+.||+|++|||+.+.++++.+++.+++..+ .
T Consensus 3 ~~v~l~-~~--~~~G~~l~gg~~~---~~~v~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~-~ 74 (85)
T 1rgw_A 3 YSVTLT-GP--GPWGFRLQGGKDF---NMPLTISRITPGSKAAQSQ-LSQGDLVVAIDGVNTDTMTHLEAQNKIKSAS-Y 74 (85)
T ss_dssp EEEEEC-CS--SCCCEEECCCGGG---TSCCBEEEECTTSHHHHSS-CCCCSBEEEETTEECTTCCHHHHHHHHTTCS-S
T ss_pred EEEEEe-CC--CccCEEEEeccCC---CCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHHcCC-C
Confidence 567774 43 5899999988764 2479999999999999999 9999999999999999999999999999876 6
Q ss_pred eEEEEEEcCC
Q psy6070 1384 LVELVLQPNT 1393 (1454)
Q Consensus 1384 SVsLVVrR~k 1393 (1454)
.+.|+|.|..
T Consensus 75 ~v~l~v~R~~ 84 (85)
T 1rgw_A 75 NLSLTLQKSK 84 (85)
T ss_dssp CEEEEEESCC
T ss_pred eEEEEEEeCC
Confidence 7999998753
No 90
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=99.27 E-value=2.4e-11 Score=115.64 Aligned_cols=90 Identities=33% Similarity=0.588 Sum_probs=80.0
Q ss_pred CceEEEEEEeCCCCCcccEEEEeccCCCC--CCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHh
Q psy6070 1301 PTLVRVSFEKGPGKKSLGFSIVGGVDSPK--GEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFK 1378 (1454)
Q Consensus 1301 pEIRTVrLqKGpG~EGLGFSIRGGkDQP~--Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLK 1378 (1454)
.+++.|+|.|+. .+|||+|.++.+.+. +..+++|..|.+||||+++|+|+.||+|++|||+++.++++.+++.+++
T Consensus 4 ~~~~~v~l~~~~--~~lG~~i~~g~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~ 81 (196)
T 3gsl_A 4 MEYEEITLERGN--SGLGFSIAGGTDNPHIGDDPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEALK 81 (196)
T ss_dssp EEEEEEEEECBT--TBSSEEEECCTTSCTTSSCCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred cEEEEEEEEECC--CCCCEEEEcccCCcccCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 456889999986 689999999877532 2458999999999999999999999999999999999999999999999
Q ss_pred cCCCCeEEEEEEcCC
Q psy6070 1379 KTKQGLVELVLQPNT 1393 (1454)
Q Consensus 1379 qSGqGSVsLVVrR~k 1393 (1454)
..+ ..+.|+|.|..
T Consensus 82 ~~g-~~v~l~v~r~~ 95 (196)
T 3gsl_A 82 EAG-SIVRLYVMRRK 95 (196)
T ss_dssp TSC-SEEEEEEEEEC
T ss_pred hCC-CcEEEEEEecC
Confidence 986 79999998864
No 91
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=99.27 E-value=1.1e-11 Score=130.89 Aligned_cols=95 Identities=34% Similarity=0.410 Sum_probs=81.7
Q ss_pred CCCCCCceEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHH
Q psy6070 1296 PQTCEPTLVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAIT 1375 (1454)
Q Consensus 1296 Prs~ppEIRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVS 1375 (1454)
|.......+.|+|.|..+ .+|||+|.||.+. ..++||..|.+||||++++.|++||+|++|||+++.+++|++++.
T Consensus 71 p~~~~~~~r~V~L~k~~~-~glGf~I~gg~d~---~~gi~V~~V~~gspA~~~aGL~~GD~Il~VNG~~v~~~t~~e~v~ 146 (263)
T 1z87_A 71 PEALLLQRRRVTVRKADA-GGLGISIKGGREN---KMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQ 146 (263)
T ss_dssp CCTTSCSSEEECCCTTTT-CCCCCEEEEETTT---TEEEEEEECCTTSHHHHCTTCCSSCEEEEESSCBCTTSCHHHHHH
T ss_pred CCcCCCccEEEEEEeCCC-CCEeEEEeeccCC---CCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCcCHHHHHH
Confidence 333445678999999863 7999999998764 358999999999999995339999999999999999999999999
Q ss_pred HHhcCCCCeEEEEEEcCCCC
Q psy6070 1376 IFKKTKQGLVELVLQPNTTE 1395 (1454)
Q Consensus 1376 LLKqSGqGSVsLVVrR~kse 1395 (1454)
+|+..+ +.|.|+|.|....
T Consensus 147 ~l~~~g-~~V~L~V~R~~~~ 165 (263)
T 1z87_A 147 ALKKTG-KEVVLEVKYMKEV 165 (263)
T ss_dssp HHHHCC-SCCCEEEECCSSS
T ss_pred HHhcCC-CeEEEEEEeCccc
Confidence 999986 7899999997654
No 92
>1x5q_A LAP4 protein; PDZ domain, scribble homolog protein, hscrib, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.27 E-value=7e-11 Score=106.27 Aligned_cols=92 Identities=28% Similarity=0.453 Sum_probs=79.0
Q ss_pred CCCceEEEEEEeCCCCCcccEEEEeccCCCC---CCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHH
Q psy6070 1299 CEPTLVRVSFEKGPGKKSLGFSIVGGVDSPK---GEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAIT 1375 (1454)
Q Consensus 1299 ~ppEIRTVrLqKGpG~EGLGFSIRGGkDQP~---Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVS 1375 (1454)
.+.+.+.+.|.+.. .+|||+|.++.+... ...+++|..|.+|+||+++| |++||+|++|||+.+.++++.+++.
T Consensus 12 ~~~~~~~~~l~~~~--~glG~~i~~g~~~~~~~~~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~ 88 (110)
T 1x5q_A 12 IEEEELTLTILRQT--GGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAG-VRVGDKLLEVNGVALQGAEHHEAVE 88 (110)
T ss_dssp CCCEEEEEEEECSS--SSCSEEEEECTTSCCSSTTCCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHH
T ss_pred CCcceEEEEEecCC--CeeeEEEEccccCCccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHH
Confidence 44566788888875 699999998875321 24589999999999999999 9999999999999999999999999
Q ss_pred HHhcCCCCeEEEEEEcCCC
Q psy6070 1376 IFKKTKQGLVELVLQPNTT 1394 (1454)
Q Consensus 1376 LLKqSGqGSVsLVVrR~ks 1394 (1454)
.++..+ ..|.|+|.|...
T Consensus 89 ~~~~~g-~~v~l~v~R~g~ 106 (110)
T 1x5q_A 89 ALRGAG-TAVQMRVWRESG 106 (110)
T ss_dssp HHHSCC-SEEEEEEEECSS
T ss_pred HhhCCC-CeEEEEEEECCc
Confidence 999865 799999998653
No 93
>1q3o_A Shank1; PDZ, GKAP, peptide binding protein; 1.80A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1q3p_A 3qjm_A 3qjn_A 3o5n_A*
Probab=99.26 E-value=4.3e-11 Score=107.76 Aligned_cols=88 Identities=16% Similarity=0.207 Sum_probs=75.1
Q ss_pred eEEEEEEeCCCCCcccEEEEeccCCCC---------CCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHH
Q psy6070 1303 LVRVSFEKGPGKKSLGFSIVGGVDSPK---------GEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEA 1373 (1454)
Q Consensus 1303 IRTVrLqKGpG~EGLGFSIRGGkDQP~---------Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEA 1373 (1454)
.+.|.|.|.. ..+|||+|.++.+... ...+++|..|.+|+||+++| |+.||+|++|||+.+.+++|+++
T Consensus 8 ~~~v~l~~~~-~~g~G~~l~~~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~ 85 (109)
T 1q3o_A 8 EKTVLLQKKD-SEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAG-LRMGDFLIEVNGQNVVKVGHRQV 85 (109)
T ss_dssp EEEEEEECCT-TSCCSEEEEESSCCCTTSCCCCCSSCCSSEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHH
T ss_pred cEEEEEEECC-CCCCcEEEEeccCCCCcccccccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHH
Confidence 4688998765 3799999999875321 12379999999999999999 99999999999999999999999
Q ss_pred HHHHhcCCCCeEEEEEEcCC
Q psy6070 1374 ITIFKKTKQGLVELVLQPNT 1393 (1454)
Q Consensus 1374 VSLLKqSGqGSVsLVVrR~k 1393 (1454)
+.+|+..+ ..+.|+|.+..
T Consensus 86 ~~~l~~~~-~~v~l~v~~~~ 104 (109)
T 1q3o_A 86 VNMIRQGG-NTLMVKVVMVT 104 (109)
T ss_dssp HHHHHHTT-TEEEEEEEEEE
T ss_pred HHHHHhCC-CEEEEEEEECC
Confidence 99999875 78999888754
No 94
>2w4f_A Protein LAP4; structural protein, phosphoprotein, UBL conjugation, leucine-rich repeat, alternative splicing, cytoplasm, circletail, coiled coil; 1.30A {Homo sapiens}
Probab=99.26 E-value=6.6e-11 Score=103.51 Aligned_cols=88 Identities=28% Similarity=0.464 Sum_probs=75.9
Q ss_pred eEEEEEEeCCCCCcccEEEEeccCCCC---CCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhc
Q psy6070 1303 LVRVSFEKGPGKKSLGFSIVGGVDSPK---GEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKK 1379 (1454)
Q Consensus 1303 IRTVrLqKGpG~EGLGFSIRGGkDQP~---Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKq 1379 (1454)
.+.+.+.+.. .+|||+|.++.+... ...+++|..|.+||||+++| |++||+|++|||+.+.++++.+++..++.
T Consensus 4 ~~~v~~~~~~--~glG~~i~~g~~~~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~ 80 (97)
T 2w4f_A 4 ELTLTILRQT--GGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAG-VRVGDKLLEVNGVALQGAEHHEAVEALRG 80 (97)
T ss_dssp EEEEEEECBT--TBSSEEEEECTTSCCSBTTBCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHT
T ss_pred EEEEEEEeCC--CceeEEEECCccCCcccCCCCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHhC
Confidence 4678888875 699999999876421 24589999999999999999 99999999999999999999999999988
Q ss_pred CCCCeEEEEEEcCCC
Q psy6070 1380 TKQGLVELVLQPNTT 1394 (1454)
Q Consensus 1380 SGqGSVsLVVrR~ks 1394 (1454)
.+ ..|.|+|.|...
T Consensus 81 ~g-~~v~l~v~R~g~ 94 (97)
T 2w4f_A 81 AG-TAVQMRVWRERE 94 (97)
T ss_dssp SC-SEEEEEEECCSS
T ss_pred CC-CeEEEEEEeCCc
Confidence 65 799999998653
No 95
>2q3g_A PDZ and LIM domain protein 7; structural genomics, structural genomics consortium, SGC; 1.11A {Homo sapiens}
Probab=99.26 E-value=2.4e-11 Score=105.35 Aligned_cols=82 Identities=28% Similarity=0.432 Sum_probs=71.0
Q ss_pred EEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcCCCC
Q psy6070 1304 VRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKTKQG 1383 (1454)
Q Consensus 1304 RTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqSGqG 1383 (1454)
+.|.+.+ . .+|||+|.++.+. ..+++|..|.+|+||+++| |++||+|++|||+.+.++++.+++.+++..+ .
T Consensus 5 ~~v~~~~-~--~~~G~~l~gg~~~---~~~v~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~g-~ 76 (89)
T 2q3g_A 5 FKVVLEG-P--APWGFRLQGGKDF---NVPLSISRLTPGGKAAQAG-VAVGDWVLSIDGENAGSLTHIEAQNKIRACG-E 76 (89)
T ss_dssp EEEEEES-S--SCCCEEEEEEGGG---TEEEEEEEECTTSHHHHTT-CCTTCEEEEETTEEGGGCCHHHHHHHHHTCT-T
T ss_pred EEEEEcC-C--CcccEEEECcCCC---CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCC-C
Confidence 4566653 2 6899999998754 2479999999999999999 9999999999999999999999999999885 7
Q ss_pred eEEEEEEcCC
Q psy6070 1384 LVELVLQPNT 1393 (1454)
Q Consensus 1384 SVsLVVrR~k 1393 (1454)
.+.|+|.|..
T Consensus 77 ~v~l~v~R~~ 86 (89)
T 2q3g_A 77 RLSLGLSRAI 86 (89)
T ss_dssp EEEEEEEEEC
T ss_pred EEEEEEEeCC
Confidence 8999998754
No 96
>1v6b_A Harmonin isoform A1; structural genomics, usher syndrome, USH1, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.26 E-value=2.5e-11 Score=111.85 Aligned_cols=88 Identities=30% Similarity=0.434 Sum_probs=74.3
Q ss_pred CceEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcC
Q psy6070 1301 PTLVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKT 1380 (1454)
Q Consensus 1301 pEIRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqS 1380 (1454)
..++.+.+.+.. ||||+|.|+.+... .+++|..|.+||||+++|.|++||+|++|||+.+.+++|++++.+|+..
T Consensus 17 ~~~~~~~~~~~~---glG~~i~gg~~~~~--~~i~I~~V~~gspA~~aggL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~ 91 (118)
T 1v6b_A 17 KDVRLLRIKKEG---SLDLALEGGVDSPV--GKVVVSAVYEGGAAERHGGVVKGDEIMAINGKIVTDYTLAEAEAALQKA 91 (118)
T ss_dssp CCEEEEEEESCS---CCCCEEEEBTTSSS--CSEEEEECCTTSHHHHHCSSCTTCEEEEESSCBCTTCBHHHHHHHHHHH
T ss_pred ceEEEEEECCCC---ccCEEEEcccCCCC--CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHHh
Confidence 356777777654 79999999876533 2599999999999999955999999999999999999999999999875
Q ss_pred ---CCCeEEEEEEcCC
Q psy6070 1381 ---KQGLVELVLQPNT 1393 (1454)
Q Consensus 1381 ---GqGSVsLVVrR~k 1393 (1454)
.+..|.|+|.|..
T Consensus 92 ~~~~g~~v~l~v~r~~ 107 (118)
T 1v6b_A 92 WNQGGDWIDLVVAVCP 107 (118)
T ss_dssp HHHTCSEEEEEEECCC
T ss_pred hhcCCCeEEEEEEeCC
Confidence 1368999999854
No 97
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=99.25 E-value=2.9e-11 Score=117.88 Aligned_cols=138 Identities=21% Similarity=0.292 Sum_probs=103.5
Q ss_pred CCCCCCceeccCCccCccCCCCCCchhhhcccCCCCccccccccccccccCCCCC---CCCC---ceEEEEEEeCCCCCc
Q psy6070 1243 NATNSNQALTNLTDSVSNTNQESPTSTELAKTSSGGFGLLHSLLASRSAFRSRPQ---TCEP---TLVRVSFEKGPGKKS 1316 (1454)
Q Consensus 1243 SsTqGDRLLeVNGEDVSNASQEEpSSVqLLKkSSgSVgLlhSiLASssvLPSRPr---s~pp---EIRTVrLqKGpG~EG 1316 (1454)
.+..||.|+.+|+..+...++.+. ..++...+..+.+.... ..+. .... ....|.|.+.. .+
T Consensus 51 gl~~GD~I~~vng~~v~~~~~~~~--~~~~~~~g~~v~l~v~R--------~~~~~~~~g~~~~~~~~~v~l~~~~--~~ 118 (200)
T 2qt5_A 51 QLDVGDYIKAVNGINLAKFRHDEI--ISLLKNVGERVVLEVEY--------ELPPVSIQGSSVMFRTVEVTLHKEG--NT 118 (200)
T ss_dssp SCCTTCEEEEETTEECTTSCHHHH--HHHHHTCCSEEEEEEEE--------ECCCCCCCCSSEEEEEEEEEEECBT--TB
T ss_pred CCCCCCEEEEECCEECCCCCHHHH--HHHHHhCCCeEEEEEec--------cCCCcccCCCccceeEEEEEEecCC--CC
Confidence 788999999999999988877666 34454444444443211 1110 0111 34566666654 68
Q ss_pred ccEEEEeccCCC-CCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcCCCCeEEEEEEcCC
Q psy6070 1317 LGFSIVGGVDSP-KGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKTKQGLVELVLQPNT 1393 (1454)
Q Consensus 1317 LGFSIRGGkDQP-~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqSGqGSVsLVVrR~k 1393 (1454)
|||.|.++.... ....+++|..|.+||+|+++|+|++||+|++|||+.+.++++++++.+|+..+ ..|.|+|.|..
T Consensus 119 lG~~l~~g~~~~~~~~~g~~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~-~~v~l~v~R~~ 195 (200)
T 2qt5_A 119 FGFVIRGGAHDDRNKSRPVVITCVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSILKQCG-QEATLLIEYDV 195 (200)
T ss_dssp CSEEEEEECCSSTTTCEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTTC-SEEEEEEEEEE
T ss_pred eEEEEECCCCCCccCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CeEEEEEEECC
Confidence 999999875421 11358999999999999999999999999999999999999999999999954 79999998853
No 98
>2qkv_A Inactivation-NO-after-potential D protein; PDZ domain, scaffolding protein, membrane, sensory transduction, vision; 1.55A {Drosophila melanogaster} PDB: 2qkt_A 2qku_A
Probab=99.25 E-value=3.9e-11 Score=106.37 Aligned_cols=85 Identities=24% Similarity=0.337 Sum_probs=74.8
Q ss_pred CceEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcC
Q psy6070 1301 PTLVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKT 1380 (1454)
Q Consensus 1301 pEIRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqS 1380 (1454)
.+.+.|.|.|.. ..+|||.+.+. ..+++|..|.+||||+++|+|++||+|++|||+.+.++++.+++.+++..
T Consensus 7 ~~~~~v~l~~~~-~~glG~~~~~~------~~gv~V~~V~~~spA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~~~~~ 79 (96)
T 2qkv_A 7 LEKFNVDLMKKA-GKELGLSLSPN------EIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVSYALFKGA 79 (96)
T ss_dssp CCCEEEEEECBT-TBCCCEEEEEC------SSSEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCHHHHHHHHHTC
T ss_pred CceEEEEEEeCC-CCCccEEEEeC------CCcEEEEEeCCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcC
Confidence 445788998765 37899999873 13799999999999999999999999999999999999999999999998
Q ss_pred CCCeEEEEEEcCC
Q psy6070 1381 KQGLVELVLQPNT 1393 (1454)
Q Consensus 1381 GqGSVsLVVrR~k 1393 (1454)
+ +.|.|+|.|..
T Consensus 80 ~-~~v~l~v~R~~ 91 (96)
T 2qkv_A 80 N-GKVSMEVTRPK 91 (96)
T ss_dssp S-SEEEEEEECCC
T ss_pred C-CcEEEEEEeCC
Confidence 6 68999999864
No 99
>1wfv_A Membrane associated guanylate kinase inverted-2; atrophin-1 interacting protein 1, activin receptor interacting protein 1; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.25 E-value=9.3e-12 Score=109.93 Aligned_cols=89 Identities=35% Similarity=0.520 Sum_probs=77.2
Q ss_pred CceEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcC
Q psy6070 1301 PTLVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKT 1380 (1454)
Q Consensus 1301 pEIRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqS 1380 (1454)
...+.|.|.+.. .+|||+|.++.+. ..+++|..|.+||||+++|+|+.||+|++|||+.+.++++.+++.+|+..
T Consensus 10 ~~~~~v~l~~~~--~g~G~~~~~~~~~---~~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 84 (103)
T 1wfv_A 10 FDYFTVDMEKGA--KGFGFSIRGGREY---KMDLYVLRLAEDGPAIRNGRMRVGDQIIEINGESTRDMTHARAIELIKSG 84 (103)
T ss_dssp SCCEECCEECCT--TSSSBCCEEETTT---TEEEECCCBCTTSHHHHHCSSCTTCEEEEETTEECSSCCHHHHHHHHHHH
T ss_pred ceEEEEEEecCC--CcCCEEEeccccC---CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 345678888876 5899999988654 34899999999999999999999999999999999999999999999976
Q ss_pred CCCeEEEEEEcCCCC
Q psy6070 1381 KQGLVELVLQPNTTE 1395 (1454)
Q Consensus 1381 GqGSVsLVVrR~kse 1395 (1454)
+ ..|.|+|.|....
T Consensus 85 g-~~v~l~v~R~~~~ 98 (103)
T 1wfv_A 85 G-RRVRLLLKRGTGS 98 (103)
T ss_dssp C-SEECEEEECTTCS
T ss_pred C-CeEEEEEEECCCC
Confidence 5 7899999886543
No 100
>2d90_A PDZ domain containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=99.24 E-value=3.5e-11 Score=106.92 Aligned_cols=87 Identities=22% Similarity=0.383 Sum_probs=76.3
Q ss_pred CceEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcC
Q psy6070 1301 PTLVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKT 1380 (1454)
Q Consensus 1301 pEIRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqS 1380 (1454)
...+.|+|.|+. .+|||++.++.+ ..+++|..|.+||||+++| |+.||+|++|||+.+.++++++++.+|+..
T Consensus 5 ~~~r~v~l~k~~--~g~G~~l~~~~~----~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 77 (102)
T 2d90_A 5 SSGRVVVIKKGS--NGYGFYLRAGPE----QKGQIIKDIEPGSPAEAAG-LKNNDLVVAVNGKSVEALDHDGVVEMIRKG 77 (102)
T ss_dssp SSSEEEEEECCS--SSSSCEEEECSS----SSSEEEECCCTTSTTTTTT-CCTTCEEEEESSCBCTTSCHHHHHHHHHHS
T ss_pred CCCEEEEEeeCC--CCccEEEEeecC----CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 345889999987 699999998643 2489999999999999999 999999999999999999999999999987
Q ss_pred CCCeEEEEEEcCCCC
Q psy6070 1381 KQGLVELVLQPNTTE 1395 (1454)
Q Consensus 1381 GqGSVsLVVrR~kse 1395 (1454)
+ ..|.|+|.|....
T Consensus 78 g-~~v~l~v~r~~~~ 91 (102)
T 2d90_A 78 G-DQTTLLVLDKEAE 91 (102)
T ss_dssp T-TEEEEEECSTTCC
T ss_pred C-CEEEEEEEECCCc
Confidence 5 7999999876544
No 101
>1mfg_A ERB-B2 interacting protein; PDZ domain, protein-peptide complex, erbin., signaling protein; 1.25A {Homo sapiens} SCOP: b.36.1.1 PDB: 1mfl_A
Probab=99.24 E-value=4.5e-11 Score=104.80 Aligned_cols=84 Identities=38% Similarity=0.647 Sum_probs=71.9
Q ss_pred EEEEEEeCCCCCcccEEEEeccCC---C--CCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHh
Q psy6070 1304 VRVSFEKGPGKKSLGFSIVGGVDS---P--KGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFK 1378 (1454)
Q Consensus 1304 RTVrLqKGpG~EGLGFSIRGGkDQ---P--~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLK 1378 (1454)
++|++.|++ +|||+|.++.+. + ....+++|..|.++|||++ | |++||+|++|||+.+.++++.+++.+++
T Consensus 5 ~~v~l~~~~---~lG~~i~gg~~~~~~p~~~~~~gv~V~~V~~~spA~~-g-L~~GD~I~~vng~~v~~~~~~~~~~~~~ 79 (95)
T 1mfg_A 5 IRVRVEKDP---ELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-L-LQPGDKIIQANGYSFINIEHGQAVSLLK 79 (95)
T ss_dssp EEEEEECSS---SCSEEEEECBTSCCCSSSTTCCCEEEEEECTTSTTTT-T-CCTTCEEEEETTEECTTCBHHHHHHHHH
T ss_pred EEEEECCCC---CCCEEEeCCcCccCCccccCCCCEEEEEECCCCchhh-C-CCCCCEEEEECCEEcCCCCHHHHHHHhh
Confidence 567777765 799999998742 1 1245899999999999999 8 9999999999999999999999999999
Q ss_pred cCCCCeEEEEEEcCC
Q psy6070 1379 KTKQGLVELVLQPNT 1393 (1454)
Q Consensus 1379 qSGqGSVsLVVrR~k 1393 (1454)
..+ ..|.|+|.|..
T Consensus 80 ~~~-~~v~l~v~R~~ 93 (95)
T 1mfg_A 80 TFQ-NTVELIIVREV 93 (95)
T ss_dssp HCC-SEEEEEEEEEC
T ss_pred cCC-CeEEEEEEeCC
Confidence 876 78999998853
No 102
>1tp5_A Presynaptic density protein 95; PDZ-peptide ligand complex, peptide binding protein; 1.54A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1tp3_A 1tq3_A 1be9_A 1bfe_A
Probab=99.24 E-value=4.8e-11 Score=108.62 Aligned_cols=87 Identities=34% Similarity=0.531 Sum_probs=77.5
Q ss_pred CCceEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhc
Q psy6070 1300 EPTLVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKK 1379 (1454)
Q Consensus 1300 ppEIRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKq 1379 (1454)
+...+.|.|.|.. .+|||+|.++.+. .+++|..|.+||||+++|+|+.||+|++|||+.+.++++.+++.+++.
T Consensus 12 ~~~~~~v~l~k~~--~glG~~l~~~~~~----~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~ 85 (119)
T 1tp5_A 12 PREPRRIVIHRGS--TGLGFNIVGGEDG----EGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKN 85 (119)
T ss_dssp CCSCEEEEEECTT--SCCCEEEEECGGG----CCEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCHHHHHHHHHT
T ss_pred CCccEEEEEEECC--CCccEEEecCCCC----CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 4567899999987 6899999987642 489999999999999999999999999999999999999999999998
Q ss_pred CCCCeEEEEEEcCC
Q psy6070 1380 TKQGLVELVLQPNT 1393 (1454)
Q Consensus 1380 SGqGSVsLVVrR~k 1393 (1454)
.+ ..+.|+|.|..
T Consensus 86 ~~-~~v~l~v~r~~ 98 (119)
T 1tp5_A 86 AG-QTVTIIAQYKP 98 (119)
T ss_dssp SC-SEEEEEEEECH
T ss_pred CC-CeEEEEEEECC
Confidence 76 78999998764
No 103
>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A
Probab=99.24 E-value=2.5e-11 Score=132.94 Aligned_cols=121 Identities=28% Similarity=0.420 Sum_probs=95.1
Q ss_pred CceEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhc-
Q psy6070 1301 PTLVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKK- 1379 (1454)
Q Consensus 1301 pEIRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKq- 1379 (1454)
+.++.|.+.|+. +|||+|.+|.+ .||+|..|.+||||+++| |++||+|++|||+++.++++++++.+|+.
T Consensus 8 ~~~~~v~~~k~~---~lG~~i~gg~~-----~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~e~~~~l~~~ 78 (391)
T 3tsz_A 8 PSMKLVKFRKGD---SVGLRLAGGND-----VGIFVAGVLEDSPAAKEG-LEEGDQILRVNNVDFTNIIREEAVLFLLDL 78 (391)
T ss_dssp -CEEEEEEECCS---SCCEEEEEETT-----TEEEEEEECTTCHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHHHS
T ss_pred CCcEEEEeecCC---ceeEEEEecCC-----CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhh
Confidence 456788888875 69999999764 389999999999999999 99999999999999999999999999996
Q ss_pred CCCCeEEEEEEcCCCCCCccccCCCCCcccccccccccccCCCCCCCCCCccCCCCc
Q psy6070 1380 TKQGLVELVLQPNTTEADSKEGLNLQPRLIPRADFTTQIYHSYNPTQPRLIPRADFT 1436 (1454)
Q Consensus 1380 SGqGSVsLVVrR~kses~SeesL~~EPpL~PRALFSnQsS~SYDPSQDSLIPCKEGG 1436 (1454)
..+..|.|+|.|................++++++| +|++..+.-+....+.
T Consensus 79 ~~g~~v~l~v~r~~~~~~~~~~~~~~~~~~vral~------dy~~~~~~~Lsf~~Gd 129 (391)
T 3tsz_A 79 PKGEEVTILAQKKKDVYRRIVESDVGDSFYIRTHF------EYEKESPYGLSFNKGE 129 (391)
T ss_dssp CTTSEEEEEEEECHHHHGGGTSSCCSCCEEEEECS------CBCCSSTTBCCBCTTC
T ss_pred cCCCeEEEEEeeCCccccccccccccccccccccc------ccCCCCCCcceEccCC
Confidence 23368999999875432222112234577889999 9988765555555444
No 104
>2kv8_A RGS12, regulator of G-protein signaling 12; PDZ domain, signaling protein; NMR {Homo sapiens}
Probab=99.24 E-value=1.1e-11 Score=106.24 Aligned_cols=81 Identities=21% Similarity=0.422 Sum_probs=72.4
Q ss_pred ceEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcCC
Q psy6070 1302 TLVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKTK 1381 (1454)
Q Consensus 1302 EIRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqSG 1381 (1454)
..+.|+|.|+. .+|||++.++. +++|..|.+||||+++| |+.||+|++|||+.+.+++|++++.+|+..+
T Consensus 2 ~~r~v~l~~~~--~g~G~~~~~~~-------~~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~ 71 (83)
T 2kv8_A 2 RVRSVEVARGR--AGYGFTLSGQA-------PCVLSCVMRGSPADFVG-LRAGDQILAVNEINVKKASHEDVVKLIGKCS 71 (83)
T ss_dssp CEEEEEECCCS--SCCSCBCCCSS-------SCBCCBCCTTSTTTTTT-CCTTCEEEEETTEECSSCCHHHHHHHHTTCS
T ss_pred CcEEEEEEeCC--CcccEEEEcCC-------CeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 35789999987 68999987642 69999999999999999 9999999999999999999999999999876
Q ss_pred CCeEEEEEEcCC
Q psy6070 1382 QGLVELVLQPNT 1393 (1454)
Q Consensus 1382 qGSVsLVVrR~k 1393 (1454)
..+.|+|.|..
T Consensus 72 -~~v~l~v~R~~ 82 (83)
T 2kv8_A 72 -GVLHMVIAEGV 82 (83)
T ss_dssp -SCEEEEEECCC
T ss_pred -CeEEEEEEcCC
Confidence 67999998853
No 105
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=99.24 E-value=8.4e-11 Score=114.22 Aligned_cols=94 Identities=20% Similarity=0.290 Sum_probs=80.9
Q ss_pred CCCceEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCC--CCHHHHHHH
Q psy6070 1299 CEPTLVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQG--RTHAEAITI 1376 (1454)
Q Consensus 1299 ~ppEIRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEG--LTHEEAVSL 1376 (1454)
.+.+.+.|.|.|+. .+|||+|.+|.+...+ .+++|..|.+||+|+++|+|+.||+|++|||+.+.+ ++|.+++.+
T Consensus 15 ~~~~~~~v~~~~~~--~~lG~~i~~g~~~~~~-~g~~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~ 91 (206)
T 3r0h_A 15 KPNKKILIELKVEK--KPMGVIVCGGKNNHVT-TGCVITHVYPEGQVAADKRLKIFDHICDINGTPIHVGSMTTLKVHQL 91 (206)
T ss_dssp CTTSCEEEEEECTT--SCCCEEEECCSSSSCC-SCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECCGGGSCHHHHHHH
T ss_pred CCCCEEEEEEEeCC--CCcCEEEecccCCCCC-CCeEEEEECCCChHHhcCCCCCCCEEEEECCEEcCCCccCHHHHHHH
Confidence 34566889999976 7999999998876332 489999999999999999999999999999999999 999999999
Q ss_pred HhcCCCCeEEEEEEcCCCC
Q psy6070 1377 FKKTKQGLVELVLQPNTTE 1395 (1454)
Q Consensus 1377 LKqSGqGSVsLVVrR~kse 1395 (1454)
++..+...|.|+|.|....
T Consensus 92 ~~~~~~~~v~l~v~R~~~~ 110 (206)
T 3r0h_A 92 FHTTYEKAVTLTVFRADPP 110 (206)
T ss_dssp HHSCCSSEEEEEEECCSSC
T ss_pred HHhcCCCceEEEEEecccC
Confidence 9998733399999986543
No 106
>2kom_A Partitioning defective 3 homolog; PAR-3B, PDZ domain, PSI, structural genomics, alternative splicing, cell cycle, cell division, cell junction; NMR {Homo sapiens}
Probab=99.23 E-value=8.8e-11 Score=108.67 Aligned_cols=91 Identities=31% Similarity=0.554 Sum_probs=77.1
Q ss_pred CceEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcC
Q psy6070 1301 PTLVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKT 1380 (1454)
Q Consensus 1301 pEIRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqS 1380 (1454)
.+.+.|.|.+.. .+|||+|.++.+...+..+++|..|.+||||+++|+|++||+|++|||+.+.++++++++.+|+..
T Consensus 29 ~~~~~v~l~~~~--~~lG~~l~~~~~~~~g~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~l~~~ 106 (121)
T 2kom_A 29 GKRLNIQLKKGT--EGLGFSITSRDVTIGGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLVGKSQEEVVSLLRST 106 (121)
T ss_dssp CEEEEEEEECCT--TCCCEEEECCCCSSSSSCCEEEEEECTTSHHHHHTCCCSSSEEEEETTEECTTSCHHHHHHHHHHC
T ss_pred CeEEEEEEEcCC--CcEeEEEEeccCCcCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcC
Confidence 445677787765 689999998765433345899999999999999999999999999999999999999999999986
Q ss_pred C-CCeEEEEEEcCC
Q psy6070 1381 K-QGLVELVLQPNT 1393 (1454)
Q Consensus 1381 G-qGSVsLVVrR~k 1393 (1454)
. +..|.|+|.|..
T Consensus 107 ~~g~~v~l~v~R~g 120 (121)
T 2kom_A 107 KMEGTVSLLVFRQE 120 (121)
T ss_dssp CSSCEEEEEEEECC
T ss_pred CCCCEEEEEEEeCC
Confidence 2 368999998753
No 107
>2h2b_A Tight junction protein ZO-1; PDZ domain, phage derived high affinity ligand, cell adhesio; 1.60A {Homo sapiens} PDB: 2h2c_A 2h3m_A 2rrm_A
Probab=99.23 E-value=6.7e-11 Score=105.66 Aligned_cols=90 Identities=23% Similarity=0.420 Sum_probs=77.2
Q ss_pred CceEEEEEEeCCCCCcccEEEEeccCCCC---CCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHH
Q psy6070 1301 PTLVRVSFEKGPGKKSLGFSIVGGVDSPK---GEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIF 1377 (1454)
Q Consensus 1301 pEIRTVrLqKGpG~EGLGFSIRGGkDQP~---Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLL 1377 (1454)
.+.+.|+|.|++ ..+|||+|.++.+.+. +..+++|..|.+||||+ +| |++||+|++|||+.+.++++.+++..+
T Consensus 6 ~~~~~v~l~k~~-~~glG~~i~~~~~~~~~~~~~~gv~V~~V~~~spA~-ag-l~~GD~I~~vng~~v~~~~~~~~~~~~ 82 (107)
T 2h2b_A 6 WEQHTVTLHRAP-GFGFGIAISGGRDNPHFQSGETSIVISDVLKGGPAE-GQ-LQENDRVAMVNGVSMDNVEHAFAVQQL 82 (107)
T ss_dssp EEEEEEEEECBT-TTBTCEEEEECTTSCCTTTCCCCEEEEEECTTSTTB-TT-BCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred ceeEEEEEEeCC-CCccCEEEecCcCCCcccCCCCCEEEEEECCCCchh-hC-CCCCCEEEEECCEECCCccHHHHHHHh
Confidence 456889999986 3799999999876421 34589999999999999 77 999999999999999999999999999
Q ss_pred hcCCCCeEEEEEEcCCC
Q psy6070 1378 KKTKQGLVELVLQPNTT 1394 (1454)
Q Consensus 1378 KqSGqGSVsLVVrR~ks 1394 (1454)
+..+ ..+.|+|.|...
T Consensus 83 ~~~g-~~v~l~v~R~~~ 98 (107)
T 2h2b_A 83 RKSG-KNAKITIRRKKG 98 (107)
T ss_dssp HTCC-SEEEEEEEEESC
T ss_pred hCCC-CEEEEEEEECCC
Confidence 8775 789999988654
No 108
>3soe_A Membrane-associated guanylate kinase, WW and PDZ containing protein 3; structural genomics consortium, SGC, PDZ domain, signaling P; 1.60A {Homo sapiens}
Probab=99.22 E-value=5.2e-11 Score=112.71 Aligned_cols=85 Identities=28% Similarity=0.390 Sum_probs=71.6
Q ss_pred CceEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcC
Q psy6070 1301 PTLVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKT 1380 (1454)
Q Consensus 1301 pEIRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqS 1380 (1454)
+++++|+|.|++ .||||+|.++. .+.+|.+|.+ +|..+| |++||+|++|||+++.+++|+|++++|+.+
T Consensus 11 ~~~~~V~L~Kg~--~G~GFsI~~~~------~g~~V~~I~~--~~~~aG-L~~GD~Il~VNG~~v~~~~h~evv~~lk~~ 79 (113)
T 3soe_A 11 GLLVTIPLIKGP--KGFGFAIADSP------TGQKVKMILD--SQWCQG-LQKGDIIKEIYHQNVQNLTHLQVVEVLKQF 79 (113)
T ss_dssp CEEEEEEEECBT--TBSSEEEEEET------TEEEEEEESC--GGGSTT-CCTTCEEEEETTEECTTSCHHHHHHHHHHS
T ss_pred CCEEEEEEEECC--CcccEEEeCCC------CCcEEEEecC--hHHhCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 567899999987 69999997653 2678999998 455556 999999999999999999999999999987
Q ss_pred C-CCeEEEEEEcCCCCC
Q psy6070 1381 K-QGLVELVLQPNTTEA 1396 (1454)
Q Consensus 1381 G-qGSVsLVVrR~kses 1396 (1454)
. +..|.|+|.|.....
T Consensus 80 ~~G~~v~L~V~R~g~~~ 96 (113)
T 3soe_A 80 PVGADVPLLILRGGPPS 96 (113)
T ss_dssp CTTCEEEEEEEESSCC-
T ss_pred CCCCEEEEEEEECCccC
Confidence 4 368999999976543
No 109
>2iwn_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.35A {Homo sapiens}
Probab=99.22 E-value=8.7e-11 Score=101.91 Aligned_cols=89 Identities=29% Similarity=0.437 Sum_probs=74.4
Q ss_pred ceEEEEEEeCCCCCcccEEEEeccCCCC-CCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcC
Q psy6070 1302 TLVRVSFEKGPGKKSLGFSIVGGVDSPK-GEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKT 1380 (1454)
Q Consensus 1302 EIRTVrLqKGpG~EGLGFSIRGGkDQP~-Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqS 1380 (1454)
+...|.|.++. .+|||++.++.+... ...+++|..|.+||||+++|+|++||+|++|||+.+.++++.+++.+|+..
T Consensus 4 ~~~~v~l~~~~--~~lG~~i~~~~~~~~~~~~~~~V~~v~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 81 (97)
T 2iwn_A 4 ETFDVELTKNV--QGLGITIAGYIGDKKLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHT 81 (97)
T ss_dssp EEEEEEEECBT--TBSCEEEECCCCC----CCCCEEEEECTTCHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHTC
T ss_pred EEEEEEEecCC--CCCcEEEEccCCCCCCCCCCEEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 34677887765 689999998754211 234899999999999999999999999999999999999999999999986
Q ss_pred CCCeEEEEEEcCC
Q psy6070 1381 KQGLVELVLQPNT 1393 (1454)
Q Consensus 1381 GqGSVsLVVrR~k 1393 (1454)
+ ..|.|+|.|..
T Consensus 82 ~-~~v~l~v~r~g 93 (97)
T 2iwn_A 82 G-QTVLLTLMRRG 93 (97)
T ss_dssp C-SEEEEEEEEEE
T ss_pred C-CeEEEEEEeCC
Confidence 5 78999998753
No 110
>3k1r_A Harmonin; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens} PDB: 2kbq_A 2kbr_A 2lsr_A
Probab=99.22 E-value=4.1e-11 Score=118.02 Aligned_cols=87 Identities=28% Similarity=0.466 Sum_probs=77.9
Q ss_pred CceEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcC
Q psy6070 1301 PTLVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKT 1380 (1454)
Q Consensus 1301 pEIRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqS 1380 (1454)
..++.|.|.|.++ .+|||+|.++.+. ..+++|..|.+||||+++| |++||+|++|||+.+.++++++++.+|+.
T Consensus 83 ~~~~~v~l~k~~~-~~lG~~i~~~~~~---~~~~~V~~V~~gspA~~aG-L~~GD~Il~vng~~v~~~~~~~~~~~l~~- 156 (192)
T 3k1r_A 83 RKLKEVRLDRLHP-EGLGLSVRGGLEF---GCGLFISHLIKGGQADSVG-LQVGDEIVRINGYSISSCTHEEVINLIRT- 156 (192)
T ss_dssp SSCEEEEEETTST-TCCCEEEEEEGGG---TEEEEEEEECTTSHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHTS-
T ss_pred CceEEEEEEeCCC-CceeEEEEccccc---CCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHcC-
Confidence 4578999999864 7999999998653 3489999999999999999 99999999999999999999999999999
Q ss_pred CCCeEEEEEEcCCC
Q psy6070 1381 KQGLVELVLQPNTT 1394 (1454)
Q Consensus 1381 GqGSVsLVVrR~ks 1394 (1454)
+ ..|.|+|.|...
T Consensus 157 ~-~~v~l~v~r~g~ 169 (192)
T 3k1r_A 157 E-KTVSIKVRHIGL 169 (192)
T ss_dssp S-SEEEEEEEECCE
T ss_pred C-CeEEEEEEECCc
Confidence 5 799999998754
No 111
>2e7k_A Maguk P55 subfamily member 2; PDZ domain, MPP2 protein, discs large homolog 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.22 E-value=2.7e-11 Score=107.05 Aligned_cols=84 Identities=24% Similarity=0.324 Sum_probs=73.2
Q ss_pred CceEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcC
Q psy6070 1301 PTLVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKT 1380 (1454)
Q Consensus 1301 pEIRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqS 1380 (1454)
..++.|+|.|..+ .+|||+|.+.. .+++|..|.+||||+++|.|++||+|++|||+.+ +.++++++.+|+..
T Consensus 5 ~~~r~v~l~k~~~-~~lG~~i~~~~------~~v~V~~V~~~spA~~ag~L~~GD~I~~ing~~v-~~~~~~~~~~l~~~ 76 (91)
T 2e7k_A 5 SSGRMVGIRKTAG-EHLGVTFRVEG------GELVIARILHGGMVAQQGLLHVGDIIKEVNGQPV-GSDPRALQELLRNA 76 (91)
T ss_dssp CCSCBCCBCCCTT-CCCCEEEEESS------SSEEEEEECSSSHHHHHCCCCTTCEEEEETTEEC-TTCHHHHHHHHHTC
T ss_pred CCcEEEEEEECCC-CcEeEEEEecC------CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEC-CCCHHHHHHHHHcC
Confidence 4557788888763 78999999842 3899999999999999988999999999999999 99999999999987
Q ss_pred CCCeEEEEEEcCC
Q psy6070 1381 KQGLVELVLQPNT 1393 (1454)
Q Consensus 1381 GqGSVsLVVrR~k 1393 (1454)
+ +.|.|+|.+..
T Consensus 77 ~-~~v~l~v~~~~ 88 (91)
T 2e7k_A 77 S-GSVILKILSGP 88 (91)
T ss_dssp C-SSBCEEEECCS
T ss_pred C-CeEEEEEEECC
Confidence 6 68999988753
No 112
>2eei_A PDZ domain-containing protein 1; regulatory factor, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.22 E-value=4.7e-11 Score=106.50 Aligned_cols=87 Identities=24% Similarity=0.371 Sum_probs=76.0
Q ss_pred CceEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcC
Q psy6070 1301 PTLVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKT 1380 (1454)
Q Consensus 1301 pEIRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqS 1380 (1454)
...+.|+|.|+. .+|||.|.++.+ ..+++|..|.+||||+++| |+.||+|++|||+.+.++++.+++.+++..
T Consensus 7 ~~~r~v~l~k~~--~~~G~~l~~~~~----~~g~~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 79 (106)
T 2eei_A 7 GQPRLCYLVKEG--GSYGFSLKTVQG----KKGVYMTDITPQGVAMRAG-VLADDHLIEVNGENVEDASHEEVVEKVKKS 79 (106)
T ss_dssp SSSEEEEEECCS--SSCSCCEECCSS----CCSCEECCCCTTSHHHHHT-CCSSEEEEEETTEECTTCCHHHHHHHHHHH
T ss_pred CCCEEEEEEECC--CCCCEEEEeccC----CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 345789999965 799999987643 2489999999999999999 999999999999999999999999999887
Q ss_pred CCCeEEEEEEcCCCC
Q psy6070 1381 KQGLVELVLQPNTTE 1395 (1454)
Q Consensus 1381 GqGSVsLVVrR~kse 1395 (1454)
+ ..+.|+|.|....
T Consensus 80 ~-~~v~l~v~r~~~~ 93 (106)
T 2eei_A 80 G-SRVMFLLVDKETD 93 (106)
T ss_dssp C-SEEEEEECCTTTS
T ss_pred C-CeEEEEEEcCchh
Confidence 5 7899999887644
No 113
>3ngh_A PDZ domain-containing protein 1; adaptor protein, SR-BI, signaling protein; 1.80A {Mus musculus} SCOP: b.36.1.0
Probab=99.22 E-value=5.9e-11 Score=105.84 Aligned_cols=84 Identities=23% Similarity=0.374 Sum_probs=74.9
Q ss_pred eEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcCCC
Q psy6070 1303 LVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKTKQ 1382 (1454)
Q Consensus 1303 IRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqSGq 1382 (1454)
.+.|.|.|.++ .+|||.+..+.+. .+++|..|.+||||+++| |+.||+|++|||+.+.+++|++++.+|+..+
T Consensus 2 ~r~v~l~~~~~-~~~G~~l~~~~~~----~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g- 74 (106)
T 3ngh_A 2 PRESKLSKQEG-QNYGFFLRIEKDT----DGHLIRVIEEGSPAEKAG-LLDGDRVLRINGVFVDKEEHAQVVELVRKSG- 74 (106)
T ss_dssp CEEEEEECCTT-CCCCCEEECCTTC----CSCEEECCCTTSHHHHTT-CCTTCEEEEETTEECTTSCHHHHHHHHHHTT-
T ss_pred CEEEEEEeCCC-CeeCEEEEEEeCC----CCEEEEEeCCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCC-
Confidence 36889999884 7899999987542 479999999999999999 9999999999999999999999999999876
Q ss_pred CeEEEEEEcCC
Q psy6070 1383 GLVELVLQPNT 1393 (1454)
Q Consensus 1383 GSVsLVVrR~k 1393 (1454)
..|.|+|.|..
T Consensus 75 ~~v~l~v~r~~ 85 (106)
T 3ngh_A 75 NSVTLLVLDGD 85 (106)
T ss_dssp TEEEEEEECHH
T ss_pred CEEEEEEEECC
Confidence 79999998864
No 114
>2fcf_A Multiple PDZ domain protein; adaptor molecule, protein linker, structural genomics, struc genomics consortium, SGC, structural protein; 1.76A {Homo sapiens} SCOP: b.36.1.1
Probab=99.21 E-value=9.3e-11 Score=103.83 Aligned_cols=89 Identities=31% Similarity=0.483 Sum_probs=73.8
Q ss_pred EEEEEEeCCCCCcccEEEEeccCCCC------CCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHH
Q psy6070 1304 VRVSFEKGPGKKSLGFSIVGGVDSPK------GEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIF 1377 (1454)
Q Consensus 1304 RTVrLqKGpG~EGLGFSIRGGkDQP~------Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLL 1377 (1454)
+.|.|.|.. ...|||++.++.+... ...+++|..|.+||||+++|+|++||+|++|||+.+.++++++++.+|
T Consensus 6 ~~v~l~~~~-~~~lG~~~~~~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l 84 (103)
T 2fcf_A 6 RRVELWREP-SKSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAI 84 (103)
T ss_dssp EEEEECCCC--CCCCEEEECCCC-------------EEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred EEEEEEeCC-CCceeEEEEccCCCCcccccCCCCCCEEEEEeCCCCcHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 688888876 3689999998654321 124899999999999999999999999999999999999999999999
Q ss_pred hcCCCCeEEEEEEcCCC
Q psy6070 1378 KKTKQGLVELVLQPNTT 1394 (1454)
Q Consensus 1378 KqSGqGSVsLVVrR~ks 1394 (1454)
+..+ +.+.|+|.|...
T Consensus 85 ~~~~-~~v~l~v~r~~~ 100 (103)
T 2fcf_A 85 RKAG-NPVVFMVQSIIS 100 (103)
T ss_dssp HTCC-SSEEEEEECCCC
T ss_pred HhCC-CcEEEEEEECCC
Confidence 9986 699999988653
No 115
>1n7t_A 99-MER peptide of densin-180-like protein; PDZ domain, C-terminal peptide complex, high affnity ligand, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2h3l_A
Probab=99.21 E-value=5.1e-11 Score=106.02 Aligned_cols=86 Identities=37% Similarity=0.611 Sum_probs=74.0
Q ss_pred ceEEEEEEeCCCCCcccEEEEeccCC---CC--CCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHH
Q psy6070 1302 TLVRVSFEKGPGKKSLGFSIVGGVDS---PK--GEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITI 1376 (1454)
Q Consensus 1302 EIRTVrLqKGpG~EGLGFSIRGGkDQ---P~--Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSL 1376 (1454)
+.+.|++.|++ +|||+|.++.+. +. ...+++|..|.+||||++ | |++||+|++|||+.+.++++.+++.+
T Consensus 11 ~~~~v~l~~~~---~lG~~i~gg~~~~~~p~~~~~~gv~V~~V~~~spA~~-g-L~~GD~I~~vng~~v~~~~~~~~~~~ 85 (103)
T 1n7t_A 11 QEIRVRVEKDP---ELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-L-LQPGDKIIQANGYSFINIEHGQAVSL 85 (103)
T ss_dssp CCEEEEEECSS---CCCBEEEECTTSSBCSSCSSCCSEECCCBSSSSTTSS-S-CCTTCEEEEETTEECSSCCHHHHHHH
T ss_pred EEEEEEEccCC---CccEEEEcccCCCCCccccCCCCEEEEEECCCCchHH-C-CCCCCEEEEECCEECCCCCHHHHHHH
Confidence 45678888875 799999997642 11 245899999999999999 8 99999999999999999999999999
Q ss_pred HhcCCCCeEEEEEEcCC
Q psy6070 1377 FKKTKQGLVELVLQPNT 1393 (1454)
Q Consensus 1377 LKqSGqGSVsLVVrR~k 1393 (1454)
++..+ ..|.|+|.|..
T Consensus 86 ~~~~g-~~v~l~v~R~~ 101 (103)
T 1n7t_A 86 LKTFQ-NTVELIIVREV 101 (103)
T ss_dssp HHHCC-SEEEEEEECCC
T ss_pred hhcCC-CeEEEEEEecC
Confidence 99876 79999998864
No 116
>3sfj_A TAX1-binding protein 3; PDZ:peptide complex, signaling protein-inhibitor complex; 1.24A {Homo sapiens} PDB: 3dj3_A
Probab=99.21 E-value=9e-11 Score=104.07 Aligned_cols=88 Identities=33% Similarity=0.450 Sum_probs=71.7
Q ss_pred EEEEEEeCC--CCCcccEEEEeccCCC---------CCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHH
Q psy6070 1304 VRVSFEKGP--GKKSLGFSIVGGVDSP---------KGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAE 1372 (1454)
Q Consensus 1304 RTVrLqKGp--G~EGLGFSIRGGkDQP---------~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEE 1372 (1454)
..|.+.+.. +..+|||++.|+.+.. ....+++|..|.+||||+++| |+.||+|++|||+.+.+++|++
T Consensus 6 ~~i~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~ 84 (104)
T 3sfj_A 6 QRVEIHKLRQGENLILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAG-LQIGDKIMQVNGWDMTMVTHDQ 84 (104)
T ss_dssp EEEEEECEEETTEEECSEEEEECTTSCGGGCSSCSSTTCCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHH
T ss_pred EEEEEEEccCCCCCcccEEEECccccCccccccccCCCCCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHH
Confidence 345555432 1236999999877641 234589999999999999999 9999999999999999999999
Q ss_pred HHHHHhcCCCCeEEEEEEcC
Q psy6070 1373 AITIFKKTKQGLVELVLQPN 1392 (1454)
Q Consensus 1373 AVSLLKqSGqGSVsLVVrR~ 1392 (1454)
++.+|+...+..+.|+|.|.
T Consensus 85 ~~~~l~~~~g~~v~l~v~R~ 104 (104)
T 3sfj_A 85 ARKRLTKRSEEVVRLLVTRQ 104 (104)
T ss_dssp HHHHHTCTTCSEEEEEEEEC
T ss_pred HHHHHHhCCCCEEEEEEEcC
Confidence 99999876546899998773
No 117
>1v5q_A GRIP1 homolog, glutamate receptor interacting protein 1A-L homolog; PDZ domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.21 E-value=1e-10 Score=107.94 Aligned_cols=95 Identities=20% Similarity=0.305 Sum_probs=80.0
Q ss_pred CCceEEEEEEeCCCCCcccEEEEeccCCC-CCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHh
Q psy6070 1300 EPTLVRVSFEKGPGKKSLGFSIVGGVDSP-KGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFK 1378 (1454)
Q Consensus 1300 ppEIRTVrLqKGpG~EGLGFSIRGGkDQP-~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLK 1378 (1454)
..+.++|.|.|+. ..+|||+|.++.... ....+++|..|.+++||+++|+|++||+|++|||+.+.++++++++.+|+
T Consensus 13 ~~~~~~v~l~k~~-~~glG~~l~~~~~~~~~~~~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~ 91 (122)
T 1v5q_A 13 HTETTEVVLTADP-VTGFGIQLQGSVFATETLSSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLR 91 (122)
T ss_dssp CEEEEEEEECCCS-SSSSCEEEECCSCCSSSCSSCCEEEEECTTSHHHHSCCCCTTCCEEEETTEESSSSCHHHHHHHHH
T ss_pred cceeEEEEEEeCC-CCccCEEEecccccCCcCCCCcEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 4567889999986 379999999873221 12357999999999999999999999999999999999999999999999
Q ss_pred cCC-CCeEEEEEEcCCCC
Q psy6070 1379 KTK-QGLVELVLQPNTTE 1395 (1454)
Q Consensus 1379 qSG-qGSVsLVVrR~kse 1395 (1454)
... ...|.|+|.|....
T Consensus 92 ~~~~g~~v~l~v~R~~~~ 109 (122)
T 1v5q_A 92 DSSITSKVTLEIEFDVAE 109 (122)
T ss_dssp HHTTTTCEEEEEEEECCC
T ss_pred hCCCCCeEEEEEEECCcc
Confidence 874 46899999987644
No 118
>2dls_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; PDZ domain, arhgef11, KIAA0380, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2omj_A 2os6_A
Probab=99.21 E-value=1.3e-10 Score=102.31 Aligned_cols=83 Identities=25% Similarity=0.444 Sum_probs=73.1
Q ss_pred CceEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcC
Q psy6070 1301 PTLVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKT 1380 (1454)
Q Consensus 1301 pEIRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqS 1380 (1454)
...+.|.|.|+. .+|||.+.+. .+++|..|.+++||+++| |+.||+|++|||+.+.++++.+++..++.
T Consensus 7 ~~~r~v~l~~~~--~~~G~~l~~~-------~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~~- 75 (93)
T 2dls_A 7 GVQRCVIIQKDQ--HGFGFTVSGD-------RIVLVQSVRPGGAAMKAG-VKEGDRIIKVNGTMVTNSSHLEVVKLIKS- 75 (93)
T ss_dssp CCEEEEEEECSS--SSCCEEEECS-------SSCEEEEECSSSTTTTTT-CCSSCEEEEETTEECSSSCHHHHHHHHTS-
T ss_pred CCCEEEEEEeCC--CceeEEEeCC-------CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHhhcC-
Confidence 445789999987 6899999864 279999999999999999 99999999999999999999999999984
Q ss_pred CCCeEEEEEEcCCCC
Q psy6070 1381 KQGLVELVLQPNTTE 1395 (1454)
Q Consensus 1381 GqGSVsLVVrR~kse 1395 (1454)
+ ..|.|+|.|....
T Consensus 76 g-~~v~l~v~R~~~~ 89 (93)
T 2dls_A 76 G-AYVALTLLGSSSG 89 (93)
T ss_dssp S-SEEEEEEECCCCC
T ss_pred C-CEEEEEEEECCCC
Confidence 4 6999999987543
No 119
>1um7_A Synapse-associated protein 102; PDZ, discs large homolog 3, DLG3-human presynaptic protein, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.21 E-value=3.6e-11 Score=107.74 Aligned_cols=88 Identities=38% Similarity=0.509 Sum_probs=77.8
Q ss_pred CCCceEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHh
Q psy6070 1299 CEPTLVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFK 1378 (1454)
Q Consensus 1299 ~ppEIRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLK 1378 (1454)
.....+.|.|.|.. .+|||+|.++.+ ..+++|..|.+++||+++|+|++||+|++|||+.+.++++.+++.+++
T Consensus 12 ~~~~~~~v~l~k~~--~glG~~l~~~~~----~~gv~V~~V~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~~~ 85 (113)
T 1um7_A 12 DAREPRKIILHKGS--TGLGFNIVGGED----GEGIFVSFILAGGPADLSGELRRGDRILSVNGVNLRNATHEQAAAALK 85 (113)
T ss_dssp CCCSEEEEEEECCS--SCSSBCCBCCST----TCCCBCCCBCSSSHHHHTTCCCTTCEEEEESSCBCTTCCHHHHHHHHH
T ss_pred CCCceEEEEEEECC--CcccEEEEeccC----CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 34567899999976 689999998764 247999999999999999999999999999999999999999999999
Q ss_pred cCCCCeEEEEEEcCC
Q psy6070 1379 KTKQGLVELVLQPNT 1393 (1454)
Q Consensus 1379 qSGqGSVsLVVrR~k 1393 (1454)
..+ ..+.|+|.|..
T Consensus 86 ~~~-~~v~l~v~r~~ 99 (113)
T 1um7_A 86 RAG-QSVTIVAQYRP 99 (113)
T ss_dssp SCC-SEEEEEEECCH
T ss_pred hCC-CcEEEEEEECc
Confidence 875 78999998754
No 120
>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}
Probab=99.20 E-value=2.4e-11 Score=136.92 Aligned_cols=118 Identities=27% Similarity=0.399 Sum_probs=93.6
Q ss_pred eEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhc--C
Q psy6070 1303 LVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKK--T 1380 (1454)
Q Consensus 1303 IRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKq--S 1380 (1454)
++.|.|.|+ .+|||+|.||.+ .||||.+|.+||||+++| |++||+|++|||+++.+++|++++.+|+. .
T Consensus 2 ~r~V~l~k~---~~lG~~i~gg~~-----~Gi~V~~V~~gspA~~aG-L~~GD~Il~VNG~~v~~~t~~e~~~~L~~~~~ 72 (468)
T 3shw_A 2 MKLVKFRKG---DSVGLRLAGGND-----VGIFVAGVLEDSPAAKEG-LEEGDQILRVNNVDFTNIIREEAVLFLLDLPK 72 (468)
T ss_dssp EEEEEEECC---SSCCEEEEEETT-----TEEEEEEECSSSHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHHHSCT
T ss_pred ceEEEEecC---CccceEEEccCc-----CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhcCC
Confidence 578899986 479999999864 389999999999999999 99999999999999999999999999998 4
Q ss_pred CCCeEEEEEEcCCCCCCccccCCCCCcccccccccccccCCCCCCCCCCccCCCCc
Q psy6070 1381 KQGLVELVLQPNTTEADSKEGLNLQPRLIPRADFTTQIYHSYNPTQPRLIPRADFT 1436 (1454)
Q Consensus 1381 GqGSVsLVVrR~kses~SeesL~~EPpL~PRALFSnQsS~SYDPSQDSLIPCKEGG 1436 (1454)
+ +.|.|+|.|................++++++| +|+|..+.-+....+.
T Consensus 73 g-~~v~L~V~r~g~~~~~~~~~~~g~s~yVralf------dy~~~~~~~LsF~~GD 121 (468)
T 3shw_A 73 G-EEVTILAQKKKDVYRRIVESDVGDSFYIRTHF------EYEKESPYGLSFNKGE 121 (468)
T ss_dssp T-SEEEEEEEECHHHHHHHHHHTCCCCEEEEECS------CBCCSSTTBCCBCTTC
T ss_pred C-CEEEEEEEECCccchhhhcccccccccccccc------CcCCCCCCCceEccCC
Confidence 4 79999999865332111111224567888988 8888765555555444
No 121
>2gzv_A PRKCA-binding protein; protein kinase C, PDZ domain, structural genomics, structura genomics consortium, SGC, signaling protein; 1.12A {Homo sapiens} PDB: 2pku_A
Probab=99.20 E-value=1.7e-10 Score=106.30 Aligned_cols=87 Identities=25% Similarity=0.407 Sum_probs=75.7
Q ss_pred ceEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcCC
Q psy6070 1302 TLVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKTK 1381 (1454)
Q Consensus 1302 EIRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqSG 1381 (1454)
..+.|.|.|+.. .+|||++.++.+. ..+++|..|.+||||+++|+|+.||+|++|||+.+.+.++++++.+|+..+
T Consensus 24 ~~~~V~l~~~~~-~~lG~~l~~~~~~---~~~~~V~~V~~gspA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~ 99 (114)
T 2gzv_A 24 VPGKVTLQKDAQ-NLIGISIGGGAQY---CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVK 99 (114)
T ss_dssp CCEEEEEECCTT-SCCSEEEEECCC-----CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCC
T ss_pred CCEEEEEEECCC-CcEeEEEEeCCCC---CCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 457899999873 5699999987654 247999999999999999999999999999999999999999999999886
Q ss_pred CCeEEEEEEcCC
Q psy6070 1382 QGLVELVLQPNT 1393 (1454)
Q Consensus 1382 qGSVsLVVrR~k 1393 (1454)
+.|.|+|.+..
T Consensus 100 -~~v~l~v~~~~ 110 (114)
T 2gzv_A 100 -GEVTIHYNKLQ 110 (114)
T ss_dssp -SEEEEEEECCC
T ss_pred -CeEEEEEEecc
Confidence 67899887643
No 122
>2jxo_A Ezrin-radixin-moesin-binding phosphoprotein 50; nherf-1, PDZ domain, PDZ2, acetylation, cell projection, membrane, polymorphism; NMR {Homo sapiens}
Probab=99.20 E-value=8.8e-11 Score=103.43 Aligned_cols=83 Identities=23% Similarity=0.426 Sum_probs=71.5
Q ss_pred eEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcCCC
Q psy6070 1303 LVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKTKQ 1382 (1454)
Q Consensus 1303 IRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqSGq 1382 (1454)
.+.+.|.++. .+|||.+.++.+. .+++|..|.+||||+++| |++||+|++|||+.+.++++++++.+|+...+
T Consensus 10 ~~~~~l~~~~--~g~G~~~~~~~~~----~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~ 82 (98)
T 2jxo_A 10 PRLCTMKKGP--SGYGFNLHSDKSK----PGQFIRSVDPDSPAEASG-LRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGD 82 (98)
T ss_dssp CEEEEEECTT--TCCCEEEECCCSS----SCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTTTT
T ss_pred cEEEEEEeCC--CcccEEEEecCCC----CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 3678899876 6899999987542 389999999999999999 99999999999999999999999999999853
Q ss_pred CeEEEEEEcC
Q psy6070 1383 GLVELVLQPN 1392 (1454)
Q Consensus 1383 GSVsLVVrR~ 1392 (1454)
..+.|+|.|.
T Consensus 83 ~~~~l~v~R~ 92 (98)
T 2jxo_A 83 ETKLLVVDRE 92 (98)
T ss_dssp EEEEEECCHH
T ss_pred cEEEEEEECC
Confidence 3556777664
No 123
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=99.20 E-value=3.9e-11 Score=139.12 Aligned_cols=143 Identities=28% Similarity=0.406 Sum_probs=110.9
Q ss_pred CCCCCC-CCCCCceeccCCccCccCCCCCCchhhhcccCCCCccccccccccccccCCCCCCCCCceEEEEEEeCCCCCc
Q psy6070 1238 NRASPN-ATNSNQALTNLTDSVSNTNQESPTSTELAKTSSGGFGLLHSLLASRSAFRSRPQTCEPTLVRVSFEKGPGKKS 1316 (1454)
Q Consensus 1238 AARSPS-sTqGDRLLeVNGEDVSNASQEEpSSVqLLKkSSgSVgLlhSiLASssvLPSRPrs~ppEIRTVrLqKGpG~EG 1316 (1454)
.+.... +..||+|+.|||..+.+.+|.++ ..+++..+..+.+.+. +..+. ....+.|.|.++. .+
T Consensus 101 pA~~aG~L~~GD~Il~Vng~~v~~~~~~~~--~~~l~~~g~~v~l~v~--------R~~~~--~~~~~~v~l~k~~--~~ 166 (721)
T 2xkx_A 101 AAAQDGRLRVNDSILFVNEVDVREVTHSAA--VEALKEAGSIVRLYVM--------RRKPP--AEKVMEIKLIKGP--KG 166 (721)
T ss_pred HHHhcCCCCCCCEEEEECCEECCCCCHHHH--HHHhhccccccceEEE--------ecccc--cccceeeeeeeec--CC
Confidence 333345 88999999999999999887777 4566655555555421 11111 1234678888875 58
Q ss_pred ccEEEEeccCCC--CCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcCCCCeEEEEEEcCCC
Q psy6070 1317 LGFSIVGGVDSP--KGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKTKQGLVELVLQPNTT 1394 (1454)
Q Consensus 1317 LGFSIRGGkDQP--~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqSGqGSVsLVVrR~ks 1394 (1454)
|||+|.++.+.. .+..|++|..|.+||+|+++|+|+.||+|++|||+.+.+++|.+++.+|+..+ ..|.|+|.|...
T Consensus 167 lG~~i~~~~~~~~~~~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~-~~v~l~V~R~g~ 245 (721)
T 2xkx_A 167 LGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGRLQIGDKILAVNSVGLEDVMHEDAVAALKNTY-DVVYLKVAKPSN 245 (721)
T ss_pred CceeeccCCCccccCCCCceEEEEeCCCCchhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHHcCC-CeEEEEEEeCCc
Confidence 999999876432 12458999999999999999999999999999999999999999999999886 689999988764
Q ss_pred C
Q psy6070 1395 E 1395 (1454)
Q Consensus 1395 e 1395 (1454)
.
T Consensus 246 ~ 246 (721)
T 2xkx_A 246 A 246 (721)
T ss_pred c
Confidence 4
No 124
>1wf7_A Enigma homologue protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.19 E-value=8.7e-11 Score=104.82 Aligned_cols=87 Identities=29% Similarity=0.426 Sum_probs=75.2
Q ss_pred CceEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcC
Q psy6070 1301 PTLVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKT 1380 (1454)
Q Consensus 1301 pEIRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqS 1380 (1454)
.+.++|.|. +. .+|||+|.++.+. ..+++|..|.+|+||+++| |+.||+|++|||+.+.++++.+++.+++..
T Consensus 4 g~~~~v~l~-~~--~~~G~~l~gg~~~---~~~v~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~~~ 76 (103)
T 1wf7_A 4 GSSGSVSLV-GP--APWGFRLQGGKDF---NMPLTISSLKDGGKASQAH-VRIGDVVLSIDGISAQGMTHLEAQNKIKAC 76 (103)
T ss_dssp CCCEEEEEE-SS--SCCSCCEEEETTT---TEEEEECCCCTTCHHHHTT-CCTTCBEEEETTEECSSCCHHHHHHHHHHC
T ss_pred CCEEEEEEe-CC--CccCEEEeccccC---CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 345778887 33 6899999998765 3479999999999999999 999999999999999999999999999988
Q ss_pred CCCeEEEEEEcCCCC
Q psy6070 1381 KQGLVELVLQPNTTE 1395 (1454)
Q Consensus 1381 GqGSVsLVVrR~kse 1395 (1454)
+ ..+.|+|.|....
T Consensus 77 g-~~v~l~v~R~g~~ 90 (103)
T 1wf7_A 77 T-GSLNMTLQRASAA 90 (103)
T ss_dssp S-SEEEEEECCCSCC
T ss_pred C-CeEEEEEEeCCCc
Confidence 5 7899999886543
No 125
>1uez_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.19 E-value=5.4e-11 Score=105.57 Aligned_cols=89 Identities=33% Similarity=0.488 Sum_probs=75.5
Q ss_pred CCceEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhc
Q psy6070 1300 EPTLVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKK 1379 (1454)
Q Consensus 1300 ppEIRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKq 1379 (1454)
+.+++.|.|.+..+..+|||+|.++.+. ..+++|..|.+|+||+++| |++||+|++|||+.+.++++.+++.+++.
T Consensus 6 ~~~~~~v~l~~~~~~~~lG~~~~~~~~~---~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~~ 81 (101)
T 1uez_A 6 SGEVRLVSLRRAKAHEGLGFSIRGGSEH---GVGIYVSLVEPGSLAEKEG-LRVGDQILRVNDKSLARVTHAEAVKALKG 81 (101)
T ss_dssp SCCCEEECCCCCCTTTCSSEEEEECTTT---TCCEEEEEECTTSHHHHHT-CCSSCCEEEETTEECSSCCHHHHHHHSSS
T ss_pred CCccEEEEEEECCCCCcccEEEeCCCCC---CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHhhcC
Confidence 4567888888854457999999998653 2489999999999999999 99999999999999999999998888876
Q ss_pred CCCCeEEEEEEcCCC
Q psy6070 1380 TKQGLVELVLQPNTT 1394 (1454)
Q Consensus 1380 SGqGSVsLVVrR~ks 1394 (1454)
. ..|.|+|.|...
T Consensus 82 ~--~~v~l~v~R~g~ 94 (101)
T 1uez_A 82 S--KKLVLSVYSAGR 94 (101)
T ss_dssp S--SSCCEEECCCCC
T ss_pred C--CeEEEEEEECCc
Confidence 5 478899987643
No 126
>2pkt_A PDZ and LIM domain protein 1; PDZ domain, structural genomics, structural genomics consort unknown function; HET: PG4; 1.50A {Homo sapiens} PDB: 2v1w_A*
Probab=99.18 E-value=1.2e-10 Score=101.27 Aligned_cols=83 Identities=25% Similarity=0.345 Sum_probs=71.5
Q ss_pred EEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcCCCC
Q psy6070 1304 VRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKTKQG 1383 (1454)
Q Consensus 1304 RTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqSGqG 1383 (1454)
+.|.+... .+|||++.++.+. ..+++|..|.+||||+++| |++||+|++|||+.+.+++|.+++.+|+..+ .
T Consensus 5 ~~v~~~~~---~~~G~~l~~~~~~---~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g-~ 76 (91)
T 2pkt_A 5 QQIDLQGP---GPWGFRLVGGKDF---EQPLAISRVTPGSKAALAN-LCIGDVITAIDGENTSNMTHLEAQNRIKGCT-D 76 (91)
T ss_dssp EEEEEESS---SCCSEEEEEEGGG---TEEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTCS-S
T ss_pred EEEEECCC---CCCCEEEEccCCC---CCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCC-C
Confidence 45555533 5899999998654 2489999999999999999 9999999999999999999999999999954 7
Q ss_pred eEEEEEEcCCC
Q psy6070 1384 LVELVLQPNTT 1394 (1454)
Q Consensus 1384 SVsLVVrR~ks 1394 (1454)
.+.|+|.|...
T Consensus 77 ~v~l~v~R~g~ 87 (91)
T 2pkt_A 77 NLTLTVARSEH 87 (91)
T ss_dssp EEEEEEEEECC
T ss_pred eEEEEEEECCc
Confidence 99999988653
No 127
>2eeg_A PDZ and LIM domain protein 4; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.18 E-value=7.8e-11 Score=103.62 Aligned_cols=83 Identities=28% Similarity=0.377 Sum_probs=72.2
Q ss_pred eEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcCCC
Q psy6070 1303 LVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKTKQ 1382 (1454)
Q Consensus 1303 IRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqSGq 1382 (1454)
.+.|.|. ++ .+|||.+.+|.+. ..+++|..|.+|+||+++| |+.||+|++|||+.+.++++.+++.+++..+
T Consensus 9 ~~~v~l~-~~--~~~G~~l~gg~~~---~~~v~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~g- 80 (94)
T 2eeg_A 9 PHSVTLR-GP--SPWGFRLVGGRDF---SAPLTISRVHAGSKAALAA-LCPGDLIQAINGESTELMTHLEAQNRIKGCH- 80 (94)
T ss_dssp CEEEEEC-CS--SCCSCCEECCTTT---TSCCEECCCCSSSHHHHTT-CCTTCEEEEETTEETTTCCHHHHHHHHHTCC-
T ss_pred eEEEEEe-CC--CccCEEEECccCC---CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCC-
Confidence 3677774 44 5899999998765 3479999999999999999 9999999999999999999999999999875
Q ss_pred CeEEEEEEcCC
Q psy6070 1383 GLVELVLQPNT 1393 (1454)
Q Consensus 1383 GSVsLVVrR~k 1393 (1454)
..+.|+|.|..
T Consensus 81 ~~v~l~v~R~g 91 (94)
T 2eeg_A 81 DHLTLSVSSGP 91 (94)
T ss_dssp SCEEEEEECCS
T ss_pred CeEEEEEEeCC
Confidence 68999998864
No 128
>2iwq_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, membrane, HOST- interaction, structural genomics consortium, synaptosome, T junction; 1.80A {Homo sapiens}
Probab=99.18 E-value=1.7e-10 Score=107.71 Aligned_cols=89 Identities=31% Similarity=0.483 Sum_probs=75.5
Q ss_pred EEEEEEeCCCCCcccEEEEeccCCCC------CCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHH
Q psy6070 1304 VRVSFEKGPGKKSLGFSIVGGVDSPK------GEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIF 1377 (1454)
Q Consensus 1304 RTVrLqKGpG~EGLGFSIRGGkDQP~------Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLL 1377 (1454)
+.|.+.|.. ..+|||++.++.+... ...+++|..|.+||||+++|+|++||+|++|||+.+.++++++++.+|
T Consensus 26 ~~v~l~k~~-~~~lGi~v~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l 104 (123)
T 2iwq_A 26 RRVELWREP-SKSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAI 104 (123)
T ss_dssp EEEEECCCT-TSCCSEEEEECC---------CCCCSEEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred EEEEEEecC-CCCccEEEEeccCccccccccCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 678888876 3689999998654311 124899999999999999999999999999999999999999999999
Q ss_pred hcCCCCeEEEEEEcCCC
Q psy6070 1378 KKTKQGLVELVLQPNTT 1394 (1454)
Q Consensus 1378 KqSGqGSVsLVVrR~ks 1394 (1454)
+..+ +.|.|+|.|...
T Consensus 105 ~~~~-~~v~l~v~r~~~ 120 (123)
T 2iwq_A 105 RKAG-NPVVFMVQSIIS 120 (123)
T ss_dssp HHCC-SSEEEEEECCCC
T ss_pred HcCC-CeEEEEEEECCc
Confidence 9986 699999988653
No 129
>3bpu_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; structural genomi consortium, SGC, ATP-binding, cell junction; 1.60A {Homo sapiens}
Probab=99.17 E-value=1.2e-10 Score=100.93 Aligned_cols=83 Identities=33% Similarity=0.482 Sum_probs=69.2
Q ss_pred ceEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcC-
Q psy6070 1302 TLVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKT- 1380 (1454)
Q Consensus 1302 EIRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqS- 1380 (1454)
+++.|+|.|+. .+|||++.+..+. .+++|..| +++||+ +| |++||+|++|||+.+.+++|++++.+|+..
T Consensus 3 ~~~~v~l~k~~--~g~G~~~~~~~~~----~~~~v~~v-~~spA~-aG-l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~ 73 (88)
T 3bpu_A 3 ELITVHIVKGP--MGFGFTIADSPGG----GGQRVKQI-VDSPRS-RG-LKEGDLIVEVNKKNVQALTHNQVVDMLVESP 73 (88)
T ss_dssp EEEEEEEECBT--TBSSCEEEECTTS----SSEEEEEC-CC--CC-TT-CCTTCEEEEETTEECTTSCHHHHHHHHHTSC
T ss_pred cEEEEEEEcCC--CceeEEEEecCCC----CcEEEEEe-cCChhH-hC-CCCCCEEEEECCEEcCCCCHHHHHHHHHhCC
Confidence 57889999987 6999999976432 47999887 999999 88 999999999999999999999999999853
Q ss_pred CCCeEEEEEEcCC
Q psy6070 1381 KQGLVELVLQPNT 1393 (1454)
Q Consensus 1381 GqGSVsLVVrR~k 1393 (1454)
.+..+.|+|.|..
T Consensus 74 ~g~~v~l~v~R~g 86 (88)
T 3bpu_A 74 KGSEVTLLVQRQT 86 (88)
T ss_dssp TTCEEEEEEEEEC
T ss_pred CCCEEEEEEEeCC
Confidence 2368999998753
No 130
>1qau_A Neuronal nitric oxide synthase (residues 1-130); beta-finger, oxidoreductase; 1.25A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1qav_B
Probab=99.17 E-value=2.4e-10 Score=102.81 Aligned_cols=88 Identities=22% Similarity=0.351 Sum_probs=76.1
Q ss_pred eEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcCCC
Q psy6070 1303 LVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKTKQ 1382 (1454)
Q Consensus 1303 IRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqSGq 1382 (1454)
+++|.|.|+. ..+|||.+.++.+ ..+++|..|.+||||+++|.|+.||+|++|||+.+.+++++++..+|+...+
T Consensus 2 ~~~v~l~~~~-~~glG~~~~~~~~----~~~~~V~~v~~~spA~~aGll~~GD~I~~ing~~v~~~~~~~~~~~l~~~~g 76 (112)
T 1qau_A 2 VISVRLFKRK-VGGLGFLVKERVS----KPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGIAS 76 (112)
T ss_dssp EEEEEEECBT-TTBTSEEEEECSS----SSCEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTSCHHHHHHHHHHSCS
T ss_pred EEEEEEEcCC-CCceeEEEEecCC----CCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 5789998875 3789999998753 2479999999999999999449999999999999999999999999998654
Q ss_pred CeEEEEEEcCCCC
Q psy6070 1383 GLVELVLQPNTTE 1395 (1454)
Q Consensus 1383 GSVsLVVrR~kse 1395 (1454)
..+.|+|.|....
T Consensus 77 ~~v~l~v~R~g~~ 89 (112)
T 1qau_A 77 ETHVVLILRGPEG 89 (112)
T ss_dssp SSEEEEEEECCTT
T ss_pred CcEEEEEEeCCcc
Confidence 7899999987543
No 131
>2eeh_A PDZ domain-containing protein 7; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.17 E-value=2.3e-10 Score=101.58 Aligned_cols=88 Identities=27% Similarity=0.469 Sum_probs=76.2
Q ss_pred CceEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcC
Q psy6070 1301 PTLVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKT 1380 (1454)
Q Consensus 1301 pEIRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqS 1380 (1454)
..++.|+|.|... ..|||++.++.+. ..+++|..|.+++||+++| |++||+|++|||+.+.++++.+++.+|+.
T Consensus 9 ~~~~~v~l~~~~~-~~lG~~~~~~~~~---~~gv~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~~- 82 (100)
T 2eeh_A 9 DIIHSVRVEKSPA-GRLGFSVRGGSEH---GLGIFVSKVEEGSSAERAG-LCVGDKITEVNGLSLESTTMGSAVKVLTS- 82 (100)
T ss_dssp CEECCEEECCCSS-SSCSEEEECCTTT---TCCEEEEEECTTSHHHHHT-CCSSCEEEEETTEECSSCCHHHHHHHHHS-
T ss_pred CeEEEEEEEECCC-CCccEEEEccccC---CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHhhcC-
Confidence 4567889998873 5699999987543 2489999999999999999 99999999999999999999999999998
Q ss_pred CCCeEEEEEEcCCCC
Q psy6070 1381 KQGLVELVLQPNTTE 1395 (1454)
Q Consensus 1381 GqGSVsLVVrR~kse 1395 (1454)
+ ..|.|+|.|....
T Consensus 83 ~-~~v~l~v~R~g~~ 96 (100)
T 2eeh_A 83 S-SRLHMMVRRMGSG 96 (100)
T ss_dssp C-SSEEEEEEECSCC
T ss_pred C-CEEEEEEEECCcC
Confidence 4 6899999987543
No 132
>3khf_A Microtubule-associated serine/threonine-protein kinase 3; MAST3, microtubule associated serine/threonine kinase 3, PDZ domain, structural genomics; 1.20A {Homo sapiens} PDB: 2w7r_A 2kqf_A 2kyl_A 3ps4_A
Probab=99.16 E-value=1.9e-10 Score=101.44 Aligned_cols=86 Identities=21% Similarity=0.216 Sum_probs=71.4
Q ss_pred EEEEEeCCCCCcccEEEEeccCCC----CCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcC
Q psy6070 1305 RVSFEKGPGKKSLGFSIVGGVDSP----KGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKT 1380 (1454)
Q Consensus 1305 TVrLqKGpG~EGLGFSIRGGkDQP----~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqS 1380 (1454)
.|.|.|+. .+|||+|.++.... ....+++|..|.+||||+++| |+.||+|++|||+.+.++++++++.+|+..
T Consensus 5 ~v~l~~~~--~~~Gf~l~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 81 (99)
T 3khf_A 5 PIVIHSSG--KKYGFSLRAIRVYMGDSDVYTVHHVVWSVEDGSPAQEAG-LRAGDLITHINGESVLGLVHMDVVELLLKS 81 (99)
T ss_dssp CEEEEC-C--CCCCEEEEEEEEESSSSSCEEEEEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHHS
T ss_pred CEEEEeCC--CCCcEEEEecccccCccccccCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcC
Confidence 46777765 69999999764321 111367999999999999999 999999999999999999999999999987
Q ss_pred CCCeEEEEEEcCCC
Q psy6070 1381 KQGLVELVLQPNTT 1394 (1454)
Q Consensus 1381 GqGSVsLVVrR~ks 1394 (1454)
+ ..+.|+|.|...
T Consensus 82 g-~~v~l~v~r~~~ 94 (99)
T 3khf_A 82 G-NKISLRTTALEN 94 (99)
T ss_dssp C-SEEEEEEECSCS
T ss_pred C-CEEEEEEEECCC
Confidence 6 799999998654
No 133
>2vz5_A TAX1-binding protein 3; WNT signaling pathway, protein binding, nucleus, cytoplasm, PDZ domain; 1.74A {Homo sapiens} PDB: 3dj1_A 3diw_A 2l4s_A 2l4t_A 3gj9_A 2kg2_A 3dj3_A
Probab=99.14 E-value=3e-10 Score=108.18 Aligned_cols=95 Identities=31% Similarity=0.436 Sum_probs=76.5
Q ss_pred CCceEEEEEEeCC--CCCcccEEEEeccCCC---------CCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCC
Q psy6070 1300 EPTLVRVSFEKGP--GKKSLGFSIVGGVDSP---------KGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGR 1368 (1454)
Q Consensus 1300 ppEIRTVrLqKGp--G~EGLGFSIRGGkDQP---------~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGL 1368 (1454)
....+.|.|.+.. +..+|||++.+|.+.. ....+++|..|.+||||+++| |++||+|++|||+.+.++
T Consensus 21 ~~~~~~v~l~~~~~~~~~~lG~~i~~g~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~~~ 99 (139)
T 2vz5_A 21 QSMVQRVEIHKLRQGENLILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAG-LQIGDKIMQVNGWDMTMV 99 (139)
T ss_dssp -CEEEEEEEECEEETTEEECSEEEEECTTSCGGGCSSCSSTTCCCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTC
T ss_pred CCceEEEEEEEcCCCCcccccEEEEccccCChhhhhhcccCCCCCEEEEEECCCCHHHHCC-CCCCCEEEEECCEEcCCC
Confidence 3456788887753 1237999999876521 123589999999999999999 999999999999999999
Q ss_pred CHHHHHHHHhcCCCCeEEEEEEcCCCC
Q psy6070 1369 THAEAITIFKKTKQGLVELVLQPNTTE 1395 (1454)
Q Consensus 1369 THEEAVSLLKqSGqGSVsLVVrR~kse 1395 (1454)
++++++.+|+...+..|.|+|.|....
T Consensus 100 ~~~~~~~~l~~~~g~~v~l~v~R~g~~ 126 (139)
T 2vz5_A 100 THDQARKRLTKRSEEVVRLLVTRQSLQ 126 (139)
T ss_dssp CHHHHHHHHCCTTCSEEEEEEEECC--
T ss_pred CHHHHHHHHHhCCCCEEEEEEEECCEE
Confidence 999999999985446899999987644
No 134
>1ujv_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics, KIAA0705 protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.13 E-value=4.8e-10 Score=100.12 Aligned_cols=84 Identities=27% Similarity=0.461 Sum_probs=71.8
Q ss_pred CCceEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhc
Q psy6070 1300 EPTLVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKK 1379 (1454)
Q Consensus 1300 ppEIRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKq 1379 (1454)
+.+.+.|.|.|+. .+|||+|.+.. .+++|..|.++ |+.+| |++||+|++|||+++.+++|++++.+|+.
T Consensus 8 ~~~~~~v~l~~~~--~g~G~~i~~~~------~Gv~V~~v~~~--a~~aG-L~~GD~I~~vng~~v~~~~~~~~~~~l~~ 76 (96)
T 1ujv_A 8 QAELMTLTIVKGA--QGFGFTIADSP------TGQRVKQILDI--QGCPG-LCEGDLIVEINQQNVQNLSHTEVVDILKD 76 (96)
T ss_dssp CCCCEEEEEECCS--SSSSEEEEEET------TEEEEEEESCG--GGSTT-CCSSCEEEEETTEECSSCCHHHHHHHHHH
T ss_pred CceEEEEEEEeCC--CceeEEEEcCC------CCEEEEEEecc--cccCC-CCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 4566889999987 69999997642 27999999994 67778 99999999999999999999999999998
Q ss_pred CC-CCeEEEEEEcCCC
Q psy6070 1380 TK-QGLVELVLQPNTT 1394 (1454)
Q Consensus 1380 SG-qGSVsLVVrR~ks 1394 (1454)
.. +..|.|+|.|...
T Consensus 77 ~~~g~~v~l~v~R~g~ 92 (96)
T 1ujv_A 77 CPIGSETSLIIHRGSG 92 (96)
T ss_dssp SCTTSEEEEEEECCSS
T ss_pred CCCCCEEEEEEEECCC
Confidence 63 4799999998654
No 135
>2yuy_A RHO GTPase activating protein 21; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.13 E-value=3.9e-11 Score=111.25 Aligned_cols=89 Identities=27% Similarity=0.456 Sum_probs=74.4
Q ss_pred eEEEEEEeCCCCCcccEEEEeccCCC-------------------------CCCccEEEEEeCCCChhhhcCCCCCCCEE
Q psy6070 1303 LVRVSFEKGPGKKSLGFSIVGGVDSP-------------------------KGEMGIFVKTIFPHGQAAESGLLVEGDEI 1357 (1454)
Q Consensus 1303 IRTVrLqKGpG~EGLGFSIRGGkDQP-------------------------~Gd~GIFISRVIPGGPADRDGRLRVGDRI 1357 (1454)
.+.|.|.|+. .||||+|.+..... ....+++|..|.+|+||+++| |++||+|
T Consensus 9 ~r~v~l~r~~--~g~Gf~l~~~t~y~~~~~~~~~~~~~~~G~~~G~~~~~~~~~~gv~V~~V~~~spA~~aG-L~~GD~I 85 (126)
T 2yuy_A 9 PKTVTLKRTS--QGFGFTLRHFIVYPPESAIQFSYKDEENGNRGGKQRNRLEPMDTIFVKQVKEGGPAFEAG-LCTGDRI 85 (126)
T ss_dssp CCCEEEECCS--SSCSCCBCCCCCCCCSSCCCSCSSSCCCCSCCCTTSCCCCCCCCCCBCCCCSSSHHHHHT-CCSSCCC
T ss_pred CEEEEEEECC--CCcceeecCccccCCHHHHHHHHHhhcCcceeceeeecccCCCCEEEEEECCCChHHHcC-CCCCCEE
Confidence 4578999987 68999998621110 012469999999999999999 9999999
Q ss_pred EeeCCeeCCCCCHHHHHHHHhcCCCCeEEEEEEcCCCC
Q psy6070 1358 LLFNNEPLQGRTHAEAITIFKKTKQGLVELVLQPNTTE 1395 (1454)
Q Consensus 1358 LEVNGISVEGLTHEEAVSLLKqSGqGSVsLVVrR~kse 1395 (1454)
++|||+.+.+++|++++.+|+..+ ..|.|+|.|....
T Consensus 86 ~~ing~~v~~~~~~~~~~~l~~~g-~~v~l~v~r~~~~ 122 (126)
T 2yuy_A 86 IKVNGESVIGKTYSQVIALIQNSD-TTLELSVMPKDSG 122 (126)
T ss_dssp CEETTEECSSCCHHHHHHHHHTCT-TEEEEECCCCCCC
T ss_pred EEECCEECCCCCHHHHHHHHHcCC-CEEEEEEEECCCC
Confidence 999999999999999999999885 7999999887543
No 136
>2edp_A Fragment, shroom family member 4; APX/shroom family member, KIAA1202 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.13 E-value=1.1e-10 Score=104.25 Aligned_cols=89 Identities=26% Similarity=0.417 Sum_probs=74.3
Q ss_pred CCceEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhc
Q psy6070 1300 EPTLVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKK 1379 (1454)
Q Consensus 1300 ppEIRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKq 1379 (1454)
+.+.+.+.+.+... .+|||+|.++.+. ..+++|..|.+++||+++|.|++||+|++|||+.+.++ +.+++.+++.
T Consensus 7 ~~~~~~~~v~~~~~-~~~G~~~~gg~~~---~~~v~V~~V~~~spA~~agGL~~GD~I~~ing~~v~~~-~~~~~~~~~~ 81 (100)
T 2edp_A 7 GGSFQYVPVQLQGG-APWGFTLKGGLEH---CEPLTVSKIEDGGKAALSQKMRTGDELVNINGTPLYGS-RQEALILIKG 81 (100)
T ss_dssp CCCCEEEEEECCSC-SCCCCCEEEEGGG---TEEEEECCCCTTSHHHHHTSCCTTCEEEEETTEECCSC-SHHHHHHHHT
T ss_pred CCCcEEEEEEECCC-CCcCEEEeccCCC---CCCeEEEEECCCCHHHHcCCCCCCCEEEEECCEEccch-HHHHHHHHHh
Confidence 44556777766543 6899999998764 24799999999999999933999999999999999987 9999999998
Q ss_pred CCCCeEEEEEEcCCC
Q psy6070 1380 TKQGLVELVLQPNTT 1394 (1454)
Q Consensus 1380 SGqGSVsLVVrR~ks 1394 (1454)
.+ ..|.|+|.|...
T Consensus 82 ~~-~~v~l~v~R~~~ 95 (100)
T 2edp_A 82 SF-RILKLIVRRRNS 95 (100)
T ss_dssp CC-SSCEEEEEECCC
T ss_pred CC-CeEEEEEEeCCC
Confidence 75 789999988753
No 137
>2vsv_A Rhophilin-2; scaffold protein, RHO GTPase binding, protein-binding, RHOB, nitration, cytoplasm, PDZ domain, CAsp8; 1.82A {Homo sapiens}
Probab=99.13 E-value=2.2e-10 Score=106.25 Aligned_cols=81 Identities=21% Similarity=0.257 Sum_probs=71.5
Q ss_pred EEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcCCCC
Q psy6070 1304 VRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKTKQG 1383 (1454)
Q Consensus 1304 RTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqSGqG 1383 (1454)
+.|.|.|++ .+|||.+.+. .+++|..|.+|+||+++| |+.||+|++|||+.+.++++++++.+|+..++.
T Consensus 25 r~v~l~k~~--~~~G~~l~~~-------~~v~V~~V~~gspA~~AG-L~~GD~Il~VnG~~v~~~~~~dv~~~i~~~~~~ 94 (109)
T 2vsv_A 25 RSIRFTAEE--GDLGFTLRGN-------APVQVHFLDPYCSASVAG-AREGDYIVSIQLVDCKWLTLSEVMKLLKSFGED 94 (109)
T ss_dssp EEEEECCGG--GCCCEEEESS-------SSCEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTTTTS
T ss_pred EEEEEEeCC--CceeEEEeCC-------CCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCC
Confidence 689999976 6899999764 268999999999999999 999999999999999999999999999988744
Q ss_pred eEEEEEEcCCC
Q psy6070 1384 LVELVLQPNTT 1394 (1454)
Q Consensus 1384 SVsLVVrR~ks 1394 (1454)
.|.|+|.+...
T Consensus 95 ~v~l~V~~~~~ 105 (109)
T 2vsv_A 95 EIEMKVVSLLD 105 (109)
T ss_dssp CEEEEEESCC-
T ss_pred eEEEEEEECCC
Confidence 59999988653
No 138
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=99.12 E-value=3.9e-10 Score=110.18 Aligned_cols=95 Identities=20% Similarity=0.309 Sum_probs=81.7
Q ss_pred CCceEEEEEEeCCCCCcccEEEEeccCCCC-CCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHh
Q psy6070 1300 EPTLVRVSFEKGPGKKSLGFSIVGGVDSPK-GEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFK 1378 (1454)
Q Consensus 1300 ppEIRTVrLqKGpG~EGLGFSIRGGkDQP~-Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLK 1378 (1454)
..+.++|.|.|+. ..+|||+|.++.+... +..+++|..|.+||||+++|+|+.||+|++|||+.+.+++++++..+|+
T Consensus 4 ~~~~~~v~l~~~~-~~glG~~i~~~~~~~~~~~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~ 82 (196)
T 1p1d_A 4 HTETTEVVLTADP-VTGFGIQLQGSVFATETLSSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLR 82 (196)
T ss_dssp CCEEEEEEEECBT-TTBCCCEEEECSSCSSSCSCSEEEEECCTTSHHHHTSCCCSSCCEEEETTBCSTTSCHHHHHHHHH
T ss_pred ccEEEEEEEEeCC-CCccCEEEeCCcCCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 4567889999987 3899999999865421 3458999999999999999999999999999999999999999999999
Q ss_pred cCC-CCeEEEEEEcCCCC
Q psy6070 1379 KTK-QGLVELVLQPNTTE 1395 (1454)
Q Consensus 1379 qSG-qGSVsLVVrR~kse 1395 (1454)
... +..|.|+|.|....
T Consensus 83 ~~~~g~~v~l~v~R~~~~ 100 (196)
T 1p1d_A 83 DSSITSKVTLEIEFDVAE 100 (196)
T ss_dssp TCCSSSEEEEEEEECSCS
T ss_pred hCCCCCeEEEEEEecCCC
Confidence 884 36899999887643
No 139
>2kjd_A Sodium/hydrogen exchange regulatory cofactor NHE- RF1; PDZ domain, protein, acetylation, cell projection, disease mutation, membrane; NMR {Homo sapiens}
Probab=99.12 E-value=3.8e-10 Score=103.65 Aligned_cols=86 Identities=23% Similarity=0.411 Sum_probs=74.5
Q ss_pred CceEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcC
Q psy6070 1301 PTLVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKT 1380 (1454)
Q Consensus 1301 pEIRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqS 1380 (1454)
...+.|+|.++. .+|||.+.++.+. .+++|..|.+||||+++| |+.||+|++|||+.+.+++++++..+|+..
T Consensus 8 ~~~r~v~l~~~~--~g~G~~l~~~~~~----~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 80 (128)
T 2kjd_A 8 LRPRLCTMKKGP--SGYGFNLHSDKSK----PGQFIRSVDPDSPAEASG-LRAQDRIVEVNGVCMEGKQHGDVVSAIRAG 80 (128)
T ss_dssp CCCEEEEEECCS--SSCCEEEEECSSS----CSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTT
T ss_pred CCcEEEEEecCC--CcccEEEEecCCC----CCEEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 345789999987 6899999987542 389999999999999999 999999999999999999999999999998
Q ss_pred CCCeEEEEEEcCC
Q psy6070 1381 KQGLVELVLQPNT 1393 (1454)
Q Consensus 1381 GqGSVsLVVrR~k 1393 (1454)
.+..+.|+|.|..
T Consensus 81 ~~~~~~l~v~R~g 93 (128)
T 2kjd_A 81 GDETKLLVVDRET 93 (128)
T ss_dssp CSEEEEEEECHHH
T ss_pred CCCEEEEEEEeCC
Confidence 5446678887754
No 140
>1vb7_A PDZ and LIM domain 2; PDZ domain PDZ-LIM protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.12 E-value=1.7e-10 Score=101.51 Aligned_cols=83 Identities=25% Similarity=0.392 Sum_probs=71.7
Q ss_pred EEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcCCCCeE
Q psy6070 1306 VSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKTKQGLV 1385 (1454)
Q Consensus 1306 VrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqSGqGSV 1385 (1454)
+.+.+.. ..+|||+|.++.+. ..+++|..|.+++||+++| |++||+|++|||+.+.+++|++++.+|+..+ ..+
T Consensus 8 ~~~~~~~-~~~lG~~l~~g~~~---~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~-~~v 81 (94)
T 1vb7_A 8 LTVDVAG-PAPWGFRISGGRDF---HTPIIVTKVTERGKAEAAD-LRPGDIIVAINGQSAENMLHAEAQSKIRQSA-SPL 81 (94)
T ss_dssp EEEEECS-SSCCSBCCEEETTT---TEEEECCCBCTTSSHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTCC-SSE
T ss_pred EEEEecC-CCCccEEEecccCC---CCCeEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCC-CcE
Confidence 4444443 36899999998654 3489999999999999999 9999999999999999999999999999986 799
Q ss_pred EEEEEcCCC
Q psy6070 1386 ELVLQPNTT 1394 (1454)
Q Consensus 1386 sLVVrR~ks 1394 (1454)
.|+|.|...
T Consensus 82 ~l~v~R~g~ 90 (94)
T 1vb7_A 82 RLQLDRSSG 90 (94)
T ss_dssp EEEEECCCC
T ss_pred EEEEEECCc
Confidence 999998753
No 141
>1uit_A Human discs large 5 protein; PDZ domain, HDLG5, maguk family, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.12 E-value=4e-10 Score=102.60 Aligned_cols=86 Identities=30% Similarity=0.405 Sum_probs=75.4
Q ss_pred CceEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcC
Q psy6070 1301 PTLVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKT 1380 (1454)
Q Consensus 1301 pEIRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqS 1380 (1454)
.+++.|.|.+.. .+|||++.++.+ .+++|..|.+|+||+++| |++||+|++|||+.+.++++.+++.+++..
T Consensus 18 ~~~~~v~l~~~~--~~lG~~~~~~~~-----~gv~V~~V~~~spA~~aG-L~~GD~Il~vng~~v~~~~~~~~~~~~~~~ 89 (117)
T 1uit_A 18 EEPRHVKVQKGS--EPLGISIVSGEK-----GGIYVSKVTVGSIAHQAG-LEYGDQLLEFNGINLRSATEQQARLIIGQQ 89 (117)
T ss_dssp CCCEEEEEECSS--CCCCEEEEECTT-----SCEEEEEECTTSHHHHHT-CCTTCEECEETTEETTTCCHHHHHHHTTSC
T ss_pred CCCEEEEEEeCC--CCccEEEEccCC-----CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 456789999886 689999998754 389999999999999999 999999999999999999999999888776
Q ss_pred CCCeEEEEEEcCCCC
Q psy6070 1381 KQGLVELVLQPNTTE 1395 (1454)
Q Consensus 1381 GqGSVsLVVrR~kse 1395 (1454)
+ ..|.|+|.|....
T Consensus 90 g-~~v~l~v~r~~~~ 103 (117)
T 1uit_A 90 C-DTITILAQYNPHV 103 (117)
T ss_dssp C-SEEEEEECCCSCC
T ss_pred C-CeEEEEEEECCch
Confidence 5 7999999886543
No 142
>2z17_A Pleckstrin homology SEC7 and coiled-coil domains- binding protein; PDZ domain, cytoplasm, membrane, polymorphism, protein binding; 2.70A {Homo sapiens}
Probab=99.10 E-value=3.5e-10 Score=101.06 Aligned_cols=83 Identities=22% Similarity=0.270 Sum_probs=69.9
Q ss_pred EEEEEEeCCCCCcccEEEEeccCC----CCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhc
Q psy6070 1304 VRVSFEKGPGKKSLGFSIVGGVDS----PKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKK 1379 (1454)
Q Consensus 1304 RTVrLqKGpG~EGLGFSIRGGkDQ----P~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKq 1379 (1454)
+.|.|.|..+ .+|||.|.+.... .....+++|..|.+|+||+++| |++||+|++|||+.+.++++++++.+|+.
T Consensus 17 ~~v~l~~~~~-~~~G~~l~~~~~~~~~~~~~~~~~~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~l~~ 94 (104)
T 2z17_A 17 KLVTVEKQDN-ETFGFEIQSYRPQNQNACSSEMFTLICKIQEDSPAHCAG-LQAGDVLANINGVSTEGFTYKQVVDLIRS 94 (104)
T ss_dssp CEEEEECCTT-SCCSEEEEECCCCCCSSSCCSCCEEEEEECTTSHHHHHT-CCTTCBCCEETTEECTTCCHHHHHHHHHH
T ss_pred eEEEEEeCCC-CCccEEEEeeecccCCcccCCCCeEEEEECCCChHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHHHh
Confidence 5677888763 6899999984221 1123589999999999999999 99999999999999999999999999999
Q ss_pred CCCCeEEEEE
Q psy6070 1380 TKQGLVELVL 1389 (1454)
Q Consensus 1380 SGqGSVsLVV 1389 (1454)
.+ +.|.|+|
T Consensus 95 ~~-~~v~l~v 103 (104)
T 2z17_A 95 SG-NLLTIET 103 (104)
T ss_dssp TT-TEEEEEC
T ss_pred CC-CcEEEEE
Confidence 86 5887765
No 143
>1b8q_A Protein (neuronal nitric oxide synthase); PDZ domain, NNOS, nitric oxide synthase, oxidoreductase; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=99.09 E-value=2.5e-10 Score=105.17 Aligned_cols=91 Identities=23% Similarity=0.383 Sum_probs=78.3
Q ss_pred CCceEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhc
Q psy6070 1300 EPTLVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKK 1379 (1454)
Q Consensus 1300 ppEIRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKq 1379 (1454)
+.+++.|.|.|+. ..+|||.+.+..+ ..+++|..|.+||||+++|.|+.||+|++|||+.+.+++++++..+|+.
T Consensus 6 ~~~~~~v~l~~~~-~~glG~~~~~~~~----~~~~~V~~V~~~spA~~aGll~~GD~I~~ing~~v~~~~~~~~~~~l~~ 80 (127)
T 1b8q_A 6 EPNVISVRLFKRK-VGGLGFLVKERVS----KPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRG 80 (127)
T ss_dssp CCCSEEEEEECTT-TSCCSCCEEECTT----SSCEEECCCSSSSSHHHHSSCCTTTCCCEETTEECSSSCHHHHHHHHHS
T ss_pred CCceEEEEEEeCC-CCcEeEEEEecCC----CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 3457889999986 3699999998653 2479999999999999999559999999999999999999999999998
Q ss_pred CCCCeEEEEEEcCCCC
Q psy6070 1380 TKQGLVELVLQPNTTE 1395 (1454)
Q Consensus 1380 SGqGSVsLVVrR~kse 1395 (1454)
..+..+.|+|.|....
T Consensus 81 ~~g~~v~l~v~R~g~~ 96 (127)
T 1b8q_A 81 IASETHVVLILRGPEG 96 (127)
T ss_dssp CCSSCEEEEEECCCCS
T ss_pred CCCCeEEEEEEeCCce
Confidence 6546899999987644
No 144
>1whd_A RGS3, regulator of G-protein signaling 3; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.09 E-value=2.7e-10 Score=101.65 Aligned_cols=83 Identities=18% Similarity=0.310 Sum_probs=72.7
Q ss_pred CceEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcC
Q psy6070 1301 PTLVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKT 1380 (1454)
Q Consensus 1301 pEIRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqS 1380 (1454)
.+.+.|.|.+.. .+|||.+.+. .+++|..|.+|+||+++| |+.||+|++|||+.+.++++++++.+|+..
T Consensus 14 ~~~~~v~l~~~~--~g~G~~~~~~-------~~~~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~~~~~~~~~~~l~~~ 83 (100)
T 1whd_A 14 GEKLQITIRRGK--DGFGFTICCD-------SPVRVQAVDSGGPAERAG-LQQLDTVLQLNERPVEHWKCVELAHEIRSC 83 (100)
T ss_dssp CEEEEEEEECCS--SSSSCBCCCS-------SSCBCCBCCTTSHHHHHT-CCSSCEEEEETTEECTTCCHHHHHHHHHHC
T ss_pred cceEEEEEECCC--CeeeEEEeCC-------CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 445778888876 6899998764 279999999999999999 999999999999999999999999999987
Q ss_pred CCCeEEEEEEcCCC
Q psy6070 1381 KQGLVELVLQPNTT 1394 (1454)
Q Consensus 1381 GqGSVsLVVrR~ks 1394 (1454)
+ +.|.|+|.|...
T Consensus 84 ~-~~v~l~v~R~~~ 96 (100)
T 1whd_A 84 P-SEIILLVWRVSG 96 (100)
T ss_dssp S-SEEEEEEEECCS
T ss_pred C-CeEEEEEEECCC
Confidence 6 679999988643
No 145
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=99.09 E-value=3.5e-10 Score=109.31 Aligned_cols=74 Identities=36% Similarity=0.613 Sum_probs=66.6
Q ss_pred CcccEEEEeccCC---C--CCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcCCCCeEEEEE
Q psy6070 1315 KSLGFSIVGGVDS---P--KGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKTKQGLVELVL 1389 (1454)
Q Consensus 1315 EGLGFSIRGGkDQ---P--~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqSGqGSVsLVV 1389 (1454)
.||||+|.||.+. + ....+++|..|.+||||++ | |+.||+|++|||+.+.+++|.+++.+|+..+ +.|.|+|
T Consensus 2 ~g~Gf~i~gg~~~~~~~~~~~~~g~~V~~v~~~spA~~-g-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~-~~v~l~v 78 (195)
T 2qbw_A 2 PELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-L-LQPGDKIIQANGYSFINIEHGQAVSLLKTFQ-NTVELII 78 (195)
T ss_dssp CCSSEEEEECTTSCCCSSCTTCCSEEEEEECTTSTTTT-T-CCTTCEEEEETTEECTTCCHHHHHHHHHHCC-SEEEEEE
T ss_pred CcccEEEECCcCCCCCccccCCCCEEEEEECCCChHHh-C-CCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CeEEEEE
Confidence 5899999998742 1 2356899999999999999 8 9999999999999999999999999999997 6999999
Q ss_pred Ec
Q psy6070 1390 QP 1391 (1454)
Q Consensus 1390 rR 1391 (1454)
.|
T Consensus 79 ~r 80 (195)
T 2qbw_A 79 VR 80 (195)
T ss_dssp EE
T ss_pred EE
Confidence 88
No 146
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=99.08 E-value=2.8e-10 Score=111.13 Aligned_cols=142 Identities=17% Similarity=0.205 Sum_probs=100.6
Q ss_pred CCC-CCCCCceeccCCccCccCCCCCCchhhhcccC--CCCccccccccccccccCCCCCCCCCceEEEEEEeCCCCCcc
Q psy6070 1241 SPN-ATNSNQALTNLTDSVSNTNQESPTSTELAKTS--SGGFGLLHSLLASRSAFRSRPQTCEPTLVRVSFEKGPGKKSL 1317 (1454)
Q Consensus 1241 SPS-sTqGDRLLeVNGEDVSNASQEEpSSVqLLKkS--SgSVgLlhSiLASssvLPSRPrs~ppEIRTVrLqKGpG~EGL 1317 (1454)
... +..||.|+.+|+..+...++.+. ..++... +..+.+....-...... .....+.+.|.+.. ...|
T Consensus 51 ~aG~l~~GD~I~~vng~~v~~~~~~~~--~~~l~~~~~g~~v~l~v~R~~~~~~~------~~~~~~~v~l~~~~-~~~l 121 (196)
T 1p1d_A 51 RCGVLQIGDRVMAINGIPTEDSTFEEA--NQLLRDSSITSKVTLEIEFDVAESVI------PSSGTFHVKLPKKH-SVEL 121 (196)
T ss_dssp HTSCCCSSCCEEEETTBCSTTSCHHHH--HHHHHTCCSSSEEEEEEEECSCSCCB------CCSSCEEEEECCCS-SCCC
T ss_pred HcCCCCCCCEEEEECCEECCCCCHHHH--HHHHHhCCCCCeEEEEEEecCCCCCC------CCCCcEEEEecCCC-CCCc
Confidence 335 88999999999999976555444 3334333 33333332110000000 11233567776543 3679
Q ss_pred cEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcCCCCeEEEEEEcCC
Q psy6070 1318 GFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKTKQGLVELVLQPNT 1393 (1454)
Q Consensus 1318 GFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqSGqGSVsLVVrR~k 1393 (1454)
||.+....... ...+++|..|.+||+|+++|+|+.||+|++|||+.+.++++++++.+|+..+ ..+.|+|.|..
T Consensus 122 G~~~~~~~~~~-~~~gv~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~-~~v~l~v~R~~ 195 (196)
T 1p1d_A 122 GITISSPSSRK-PGDPLVISDIKKGSVAHRTGTLELGDKLLAIDNIRLDSCSMEDAVQILQQCE-DLVKLKIRKDE 195 (196)
T ss_dssp CCEEECSCSSS-TTCCCEEEECCSSSHHHHTSCCCTTCEEEEETTEEGGGCCHHHHHHHHHHCT-TCEEEEEECCC
T ss_pred CEEEECCCCCC-CCCCEEEEEECCCCcHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC-CEEEEEEEeCC
Confidence 99998864331 1348999999999999999999999999999999999999999999999984 79999998864
No 147
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=99.07 E-value=7.3e-10 Score=108.04 Aligned_cols=87 Identities=28% Similarity=0.283 Sum_probs=75.9
Q ss_pred ceEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcCC
Q psy6070 1302 TLVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKTK 1381 (1454)
Q Consensus 1302 EIRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqSG 1381 (1454)
..+.|.|.|.. ..+|||+|.++.+. ..+++|..|.+||||+++|.|+.||+|++|||+.+.+++|.+++.+|+..+
T Consensus 7 ~~~~v~l~~~~-~~~lG~~i~~~~~~---~~~~~V~~v~~~spA~~aggl~~GD~I~~vng~~v~~~~~~~~~~~~~~~g 82 (200)
T 2qt5_A 7 GSTVVELMKKE-GTTLGLTVSGGIDK---DGKPRVSNLRQGGIAARSDQLDVGDYIKAVNGINLAKFRHDEIISLLKNVG 82 (200)
T ss_dssp EEEEEEEECCT-TCCCCEEEECCTTS---SSCSEEEEECTTSHHHHTTSCCTTCEEEEETTEECTTSCHHHHHHHHHTCC
T ss_pred CCEEEEEEeCC-CCCCCEEEecccCC---CCCeEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 35778888876 38999999998765 247999999999999999339999999999999999999999999999886
Q ss_pred CCeEEEEEEcCC
Q psy6070 1382 QGLVELVLQPNT 1393 (1454)
Q Consensus 1382 qGSVsLVVrR~k 1393 (1454)
..|.|+|.|..
T Consensus 83 -~~v~l~v~R~~ 93 (200)
T 2qt5_A 83 -ERVVLEVEYEL 93 (200)
T ss_dssp -SEEEEEEEEEC
T ss_pred -CeEEEEEeccC
Confidence 79999998854
No 148
>1wif_A RSGI RUH-020, riken cDNA 4930408O21; PDZ domain, structural genomics, mouse cDNA, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.06 E-value=3.4e-10 Score=107.95 Aligned_cols=84 Identities=15% Similarity=0.310 Sum_probs=74.3
Q ss_pred CceEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcC
Q psy6070 1301 PTLVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKT 1380 (1454)
Q Consensus 1301 pEIRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqS 1380 (1454)
...+.+.|.++. .+|||+|.+.. .+++|..|.+||||+++|+|++||+|++|||+.+.+.+|++++.+|+..
T Consensus 26 ~~~~~~~l~k~~--~glG~~i~~~~------~~v~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~s~~d~~~~l~~~ 97 (126)
T 1wif_A 26 NKVIQTKLTVGN--LGLGLVVIQNG------PYLQISHLINKGAAASDGILQPGDVLISVGHANVLGYTLREFLKLLQNI 97 (126)
T ss_dssp CCEEEEEEECCT--TCCCCCEEEET------TEEEECCCCTTSSGGGCSSSCTTCBEEEESSSCCTTCCHHHHHHHHTSC
T ss_pred CceEEEEEecCC--ceEeEEEEcCC------CcEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcC
Confidence 356788899876 69999998742 3799999999999999999999999999999999999999999999984
Q ss_pred C-CCeEEEEEEcC
Q psy6070 1381 K-QGLVELVLQPN 1392 (1454)
Q Consensus 1381 G-qGSVsLVVrR~ 1392 (1454)
. +..|.|+|.|.
T Consensus 98 ~~G~~v~l~V~R~ 110 (126)
T 1wif_A 98 TIGTVLQIKAYRG 110 (126)
T ss_dssp CSSCEEEEEEESS
T ss_pred CCCCEEEEEEEEC
Confidence 2 36899999987
No 149
>2edv_A FERM and PDZ domain-containing protein 1; cytoskeletal-associated protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.06 E-value=1.5e-10 Score=102.93 Aligned_cols=83 Identities=24% Similarity=0.366 Sum_probs=72.2
Q ss_pred CceEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcC
Q psy6070 1301 PTLVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKT 1380 (1454)
Q Consensus 1301 pEIRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqS 1380 (1454)
+..++|+|.|.+...+|||.|.+. .+++|..|.+||||+ +| |+.||+|++|||+.+.++++.+++.+++..
T Consensus 7 ~~~~~v~l~~~~~~~~~G~~l~~~-------~~~~V~~V~~~spA~-ag-L~~GD~Il~ing~~v~~~~~~~~~~~~~~~ 77 (96)
T 2edv_A 7 GVRHTVKIDKDTLLQDYGFHISES-------LPLTVVAVTAGGSAH-GK-LFPGDQILQMNNEPAEDLSWERAVDILREA 77 (96)
T ss_dssp CEEEEEEECCCSSSCSCSBCCCSS-------SSCBCCCBCSSSSST-TT-SCTTCBEEEESSCBSTTCCHHHHHHHHHHC
T ss_pred CccEEEEEEECCCCCcccEEEecC-------CCeEEEEECCCCchh-hC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 345789999887434899999772 379999999999996 66 999999999999999999999999999987
Q ss_pred CCCeEEEEEEcCC
Q psy6070 1381 KQGLVELVLQPNT 1393 (1454)
Q Consensus 1381 GqGSVsLVVrR~k 1393 (1454)
+ ..|.|+|.|..
T Consensus 78 g-~~v~l~v~R~~ 89 (96)
T 2edv_A 78 E-DSLSITVVRCT 89 (96)
T ss_dssp S-SCEEEEEEECC
T ss_pred C-CeEEEEEEECC
Confidence 5 79999999976
No 150
>2edz_A PDZ domain-containing protein 1; CFTR-associated protein of 70 kDa, Na/PI cotransporter C- terminal-associated protein, NAPI-CAP1; NMR {Mus musculus}
Probab=99.06 E-value=6.5e-10 Score=101.05 Aligned_cols=84 Identities=21% Similarity=0.348 Sum_probs=74.1
Q ss_pred eEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcCCC
Q psy6070 1303 LVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKTKQ 1382 (1454)
Q Consensus 1303 IRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqSGq 1382 (1454)
.+.+.|.+.. .++|||.|.++.+. .+++|..|.+||||+++| |+.||+|++|||+.+.++++++++.+|+..+
T Consensus 14 p~~~~l~~~~-~~~~G~~l~~~~~~----~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~g- 86 (114)
T 2edz_A 14 PRECKLSKQE-GQNYGFFLRIEKDT----DGHLIRVIEEGSPAEKAG-LLDGDRVLRINGVFVDKEEHAQVVELVRKSG- 86 (114)
T ss_dssp CEEEEEECCT-TCCCSCEEECCTTC----CSCEEECCCTTCTTGGGT-CCTTCEEEEESSSBCSSSCHHHHHHHHHHTC-
T ss_pred CEEEEEeCCC-CCcccEEEEEecCC----CCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCC-
Confidence 3678888876 37899999876432 489999999999999999 9999999999999999999999999999875
Q ss_pred CeEEEEEEcCC
Q psy6070 1383 GLVELVLQPNT 1393 (1454)
Q Consensus 1383 GSVsLVVrR~k 1393 (1454)
..|.|+|.|..
T Consensus 87 ~~v~l~v~R~~ 97 (114)
T 2edz_A 87 NSVTLLVLDGD 97 (114)
T ss_dssp SEEEEEEECHH
T ss_pred CEEEEEEEECC
Confidence 79999998864
No 151
>1y7n_A Amyloid beta A4 precursor protein-binding family A member 1; copper chaperone for superoxide dismutase, neuronal adaptor, protein transport; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.05 E-value=1.4e-09 Score=97.00 Aligned_cols=77 Identities=21% Similarity=0.403 Sum_probs=65.6
Q ss_pred EEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcCCCC
Q psy6070 1304 VRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKTKQG 1383 (1454)
Q Consensus 1304 RTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqSGqG 1383 (1454)
+.+.+.+.....+|||.+.+ + +|..|.+||||+++| |+.||+|++|||+.+.++++++++.+|+..+ .
T Consensus 13 ~~~~i~~~~~~~~lG~~~~~---------G-~V~~V~~~spA~~aG-L~~GD~Il~Ing~~v~~~~~~~~~~~l~~~g-~ 80 (90)
T 1y7n_A 13 TTVLIRRPDLRYQLGFSVQN---------G-IICSLMRGGIAERGG-VRVGHRIIEINGQSVVATPHEKIVHILSNAV-G 80 (90)
T ss_dssp EEEEEEESSTTSCCCEEEET---------T-EEEEECTTSHHHHHT-CCSSCEEEEETTEECTTSCHHHHHHHHHHCC-E
T ss_pred ceEEEEeCCCccccCeEecC---------C-EEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCC-C
Confidence 44555554445789999853 3 899999999999999 9999999999999999999999999999875 7
Q ss_pred eEEEEEEcC
Q psy6070 1384 LVELVLQPN 1392 (1454)
Q Consensus 1384 SVsLVVrR~ 1392 (1454)
.|.|+|.+.
T Consensus 81 ~v~l~v~p~ 89 (90)
T 1y7n_A 81 EIHMKTMPA 89 (90)
T ss_dssp EEEEEEECC
T ss_pred eEEEEEEEC
Confidence 899998764
No 152
>3tsv_A Tight junction protein ZO-1; PDZ, scaffolding, JAM, cell adhesion; 1.99A {Homo sapiens} PDB: 3shu_A
Probab=99.04 E-value=1.3e-09 Score=101.88 Aligned_cols=83 Identities=35% Similarity=0.558 Sum_probs=69.7
Q ss_pred ceEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhc-C
Q psy6070 1302 TLVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKK-T 1380 (1454)
Q Consensus 1302 EIRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKq-S 1380 (1454)
.++.+.+.++ .+|||.+.++.+ .+++|..|.+||||+++| |+.||+|++|||+.+.++++++++.+|+. .
T Consensus 29 ~~~~~~~~~~---~~lG~~l~~~~~-----~gv~V~~V~~gspA~~aG-L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~ 99 (124)
T 3tsv_A 29 SMKLVKFRKG---DSVGLRLAGGND-----VGIFVAGVLEDSPAAKEG-LEEGDQILRVNNVDFTNIIREEAVLFLLDLP 99 (124)
T ss_dssp CCEEEEEECS---SCCCEEEEECTT-----SCEEEEEECTTCHHHHTT-CCTTEEEEEETTEECSSCCHHHHHHHHHHSC
T ss_pred CeEEEEcCCC---CceeEEEecCCC-----CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhcC
Confidence 3455555554 489999998754 389999999999999999 99999999999999999999999998885 2
Q ss_pred CCCeEEEEEEcCC
Q psy6070 1381 KQGLVELVLQPNT 1393 (1454)
Q Consensus 1381 GqGSVsLVVrR~k 1393 (1454)
.+..|.|+|.|..
T Consensus 100 ~g~~v~l~v~R~~ 112 (124)
T 3tsv_A 100 KGEEVTILAQKKK 112 (124)
T ss_dssp TTCEEEEEEEECH
T ss_pred CCCEEEEEEEECC
Confidence 2368999998864
No 153
>1x5n_A Harmonin; PDZ domain, usher syndrome 1C protein, autoimmune enteropathy-related antigen AIE-75 ,antigen NY-CO-38/NY-CO- 37, PDZ-73 protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2kbs_A
Probab=99.03 E-value=1.1e-09 Score=99.14 Aligned_cols=84 Identities=26% Similarity=0.374 Sum_probs=72.6
Q ss_pred ceEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcCC
Q psy6070 1302 TLVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKTK 1381 (1454)
Q Consensus 1302 EIRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqSG 1381 (1454)
..++|.+.+.. ..+|||+|.++.+. ..+++|..|.++++|+++| |+.||+|++|||+.+.++++.+++.+|+..
T Consensus 15 ~~~~v~~~~~~-~~~lG~~l~~~~~~---~~gv~V~~V~~~s~A~~aG-L~~GD~Il~vng~~v~~~~~~~~~~~~~~~- 88 (114)
T 1x5n_A 15 KEKKVFISLVG-SRGLGCSISSGPIQ---KPGIFISHVKPGSLSAEVG-LEIGDQIVEVNGVDFSNLDHKEAVNVLKSS- 88 (114)
T ss_dssp SSEEEEECCCS-SCCCCEEEEECCSS---SCSEEEEEECTTSTTTTTT-CCTTCEEEEETTEETTSCCTTHHHHHHHHC-
T ss_pred CcEEEEEEEcC-CCceeEEEeecCCC---CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcC-
Confidence 34777786665 37999999988654 3489999999999999999 999999999999999999999999999886
Q ss_pred CCeEEEEEEcC
Q psy6070 1382 QGLVELVLQPN 1392 (1454)
Q Consensus 1382 qGSVsLVVrR~ 1392 (1454)
..+.|+|.|.
T Consensus 89 -~~v~l~v~r~ 98 (114)
T 1x5n_A 89 -RSLTISIVAA 98 (114)
T ss_dssp -SSEEEEECSS
T ss_pred -CeEEEEEEcC
Confidence 4899999876
No 154
>2lob_A Golgi-associated PDZ and coiled-coil motif-contai protein; structural protein-hydrolase complex, peptide binding protei; NMR {Homo sapiens}
Probab=98.60 E-value=2.3e-11 Score=112.15 Aligned_cols=83 Identities=33% Similarity=0.510 Sum_probs=71.9
Q ss_pred ceEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhh-cCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcC
Q psy6070 1302 TLVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAE-SGLLVEGDEILLFNNEPLQGRTHAEAITIFKKT 1380 (1454)
Q Consensus 1302 EIRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADR-DGRLRVGDRILEVNGISVEGLTHEEAVSLLKqS 1380 (1454)
.++.|.|.|..+ .+|||++.++.+. ..+++|..|.+||||++ +| |++||+|++|||+++.++++++++.+|+..
T Consensus 27 ~~~~v~l~k~~~-~glG~~l~~g~~~---~~gv~V~~V~~~spA~~~aG-L~~GD~Il~ING~~v~~~~~~~~~~~l~~~ 101 (112)
T 2lob_A 27 GIRKVLLLKEDH-EGLGISITGGKEH---GVPILISEIHPGQPADRCGG-LHVGDAILAVNGVNLRDTKHKEAVTILSQQ 101 (112)
Confidence 456788888763 7999999998654 24799999999999999 67 999999999999999999999999999987
Q ss_pred CCCeEEEEEE
Q psy6070 1381 KQGLVELVLQ 1390 (1454)
Q Consensus 1381 GqGSVsLVVr 1390 (1454)
+ +.|.|+|.
T Consensus 102 ~-~~v~l~V~ 110 (112)
T 2lob_A 102 R-GEIEFEVV 110 (112)
Confidence 6 56877764
No 155
>3cyy_A Tight junction protein ZO-1; protein-ligand complex, cell junction, membrane, phosphoprot domain, tight junction, transmembrane; 2.40A {Homo sapiens}
Probab=99.02 E-value=2.4e-09 Score=92.56 Aligned_cols=82 Identities=27% Similarity=0.435 Sum_probs=69.4
Q ss_pred eEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcCCC
Q psy6070 1303 LVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKTKQ 1382 (1454)
Q Consensus 1303 IRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqSGq 1382 (1454)
...|.+.+......|||.+.. +++|..|.+||+|+++|+|+.||+|++|||+.+.+++++++..+|+..+
T Consensus 3 ~~~v~~~~~~~~~~~g~~~~~---------gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~- 72 (92)
T 3cyy_A 3 PTKVTLVKSAKNEEYGLRLAS---------HIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERSK- 72 (92)
T ss_dssp CEEEEEECSSTTSCCCEEEEE---------EEEEEEECTTCHHHHSCCCCTTCEEEEETTEECTTCCHHHHHHHHHTTT-
T ss_pred cEEEEEEeCCCCCCCCEEEeC---------CEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-
Confidence 356777765444689998862 6999999999999999999999999999999999999999999999876
Q ss_pred CeEEEEEEcCCC
Q psy6070 1383 GLVELVLQPNTT 1394 (1454)
Q Consensus 1383 GSVsLVVrR~ks 1394 (1454)
+.+.|+|.|...
T Consensus 73 ~~v~l~v~r~g~ 84 (92)
T 3cyy_A 73 GKLKMVVQRDER 84 (92)
T ss_dssp TEEEEEEEC---
T ss_pred CcEEEEEEeCCc
Confidence 699999988653
No 156
>2d8i_A T-cell lymphoma invasion and metastasis 1 variant; PDZ domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.02 E-value=1.2e-09 Score=101.80 Aligned_cols=92 Identities=22% Similarity=0.358 Sum_probs=76.3
Q ss_pred CCCCceEEEEEEeCCCC-CcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHH
Q psy6070 1298 TCEPTLVRVSFEKGPGK-KSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITI 1376 (1454)
Q Consensus 1298 s~ppEIRTVrLqKGpG~-EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSL 1376 (1454)
.++..++.|.|.|.... .+|||+|.+..+. +..+++|..|.+|+||+++| |++||+|++|||+.+..+++++++.+
T Consensus 11 ~~~~~~~~v~l~k~~~~~~~~G~~v~~~~~~--~~~gv~V~~V~~~spA~~aG-L~~GD~Il~Ing~~v~~~~~~~~~~~ 87 (114)
T 2d8i_A 11 ICPKVTQSIHIEKSDTAADTYGFSLSSVEED--GIRRLYVNSVKETGLASKKG-LKAGDEILEINNRAADALNSSMLKDF 87 (114)
T ss_dssp SSCCEEEEEEEECSCTTTCCCCCEEEEEEET--TEEEEEEEECCTTSSHHHHT-CCTTCCEEEESSCBGGGCCHHHHHHH
T ss_pred eccCceEEEEEEeCCCCccccCEEEEecCcC--CcCCEEEEEeCCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHH
Confidence 34567789999998732 2799999875432 12479999999999999999 99999999999999999999999999
Q ss_pred HhcCCCCeEEEEEEcCCCC
Q psy6070 1377 FKKTKQGLVELVLQPNTTE 1395 (1454)
Q Consensus 1377 LKqSGqGSVsLVVrR~kse 1395 (1454)
|+.. .+.|+|.|....
T Consensus 88 l~~~---~v~l~v~R~p~~ 103 (114)
T 2d8i_A 88 LSQP---SLGLLVRTYPEL 103 (114)
T ss_dssp HTSS---EEEEEEEECCCS
T ss_pred HhCC---cEEEEEEECCCC
Confidence 9853 899999886544
No 157
>1vae_A Rhophilin 2, rhophilin, RHO GTPase binding protein 2; PDZ domain, intracellular signaling cascade, signal transduction; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.01 E-value=3.6e-10 Score=104.35 Aligned_cols=82 Identities=23% Similarity=0.277 Sum_probs=71.4
Q ss_pred EEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcCCCC
Q psy6070 1304 VRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKTKQG 1383 (1454)
Q Consensus 1304 RTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqSGqG 1383 (1454)
+.|+|.|+. .+|||.+.++ .+++|..|.+|+||+++| |+.||+|++|||+.+.++++++++.+|+..++.
T Consensus 17 r~v~l~~~~--~~~G~~l~~~-------~~v~V~~V~~~spA~~aG-L~~GD~Il~InG~~v~~~~~~d~~~~i~~~~~~ 86 (111)
T 1vae_A 17 RGIHFTVEE--GDLGFTLRGN-------TPVQVHFLDPHCSASLAG-AKEGDYIVSIQGVDCKWLTVSEVMKLLKSFGGE 86 (111)
T ss_dssp CCCCEECCS--SCCSCCEESS-------SSCEECCCCTTSSHHHHH-CCTTCEEEEETTEECSSCCHHHHHHHHHHTTTS
T ss_pred eEEEEEcCC--CcccEEEeCC-------CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCc
Confidence 467888875 6899999764 268999999999999999 999999999999999999999999999988745
Q ss_pred eEEEEEEcCCCC
Q psy6070 1384 LVELVLQPNTTE 1395 (1454)
Q Consensus 1384 SVsLVVrR~kse 1395 (1454)
.|.|+|.+....
T Consensus 87 ~v~l~V~~~~~~ 98 (111)
T 1vae_A 87 EVEMKVVSLLDS 98 (111)
T ss_dssp EECEEEECEECC
T ss_pred eEEEEEEecCCC
Confidence 699999886544
No 158
>1v5l_A PDZ and LIM domain 3; actinin alpha 2 associated LIM protein; PDZ domain, cytoskeleton, actin binding, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.99 E-value=3.4e-10 Score=101.23 Aligned_cols=84 Identities=29% Similarity=0.406 Sum_probs=71.7
Q ss_pred EEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcCCCC
Q psy6070 1304 VRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKTKQG 1383 (1454)
Q Consensus 1304 RTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqSGqG 1383 (1454)
++|.+. +. .+|||++.++.+. ..+++|..|.+++||+++| |++||+|++|||+.+.++++++++.+|+..+ .
T Consensus 7 ~~v~~~-~~--~~lG~~l~~g~~~---~~~~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~g-~ 78 (103)
T 1v5l_A 7 GNVVLP-GP--APWGFRLSGGIDF---NQPLVITRITPGSKAAAAN-LCPGDVILAIDGFGTESMTHADAQDRIKAAS-Y 78 (103)
T ss_dssp BCCEEE-SS--SCCSBCCEEETTT---TEEEECSCBCTTSTTGGGT-CCTTCBEEEETTEECSSCCHHHHHHHHTTCC-S
T ss_pred EEEEEc-CC--CCcCEEEeccccC---CCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCC-C
Confidence 345554 33 5899999988754 2479999999999999999 9999999999999999999999999999984 7
Q ss_pred eEEEEEEcCCCC
Q psy6070 1384 LVELVLQPNTTE 1395 (1454)
Q Consensus 1384 SVsLVVrR~kse 1395 (1454)
.+.|+|.|....
T Consensus 79 ~v~l~v~R~g~~ 90 (103)
T 1v5l_A 79 QLCLKIDRAETR 90 (103)
T ss_dssp EEECEECCCTTT
T ss_pred eEEEEEEECCeE
Confidence 999999887643
No 159
>1uf1_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.98 E-value=6.7e-09 Score=96.07 Aligned_cols=87 Identities=30% Similarity=0.486 Sum_probs=73.7
Q ss_pred ceEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcCC
Q psy6070 1302 TLVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKTK 1381 (1454)
Q Consensus 1302 EIRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqSG 1381 (1454)
..++|.+..... .+|||.+.++.+. ..+++|..|.+|+||+++| |++||+|++|||+.+.++++.+++..++..
T Consensus 20 ~~~~v~v~~~~~-~~lG~~~~~~~~~---~~gv~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~~~~~~~~~~~~~~~- 93 (128)
T 1uf1_A 20 DEKKVNLVLGDG-RSLGLTIRGGAEY---GLGIYITGVDPGSEAEGSG-LKVGDQILEVNGRSFLNILHDEAVRLLKSS- 93 (128)
T ss_dssp SEEEEEEECCSS-CCCCEEEECCTTT---TCCCEEEEECTTCHHHHHT-CCTTCEEEEETTEECSSCCHHHHHHHHTTC-
T ss_pred cEEEEEEEECCC-CccCEEEECcccC---CCCEEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHhcC-
Confidence 456777776542 5799999986543 2489999999999999999 999999999999999999999999999885
Q ss_pred CCeEEEEEEcCCCC
Q psy6070 1382 QGLVELVLQPNTTE 1395 (1454)
Q Consensus 1382 qGSVsLVVrR~kse 1395 (1454)
..+.|+|.|....
T Consensus 94 -~~v~l~v~R~g~~ 106 (128)
T 1uf1_A 94 -RHLILTVKDVGRL 106 (128)
T ss_dssp -SEEEEEEECCSCC
T ss_pred -CeEEEEEEECCcc
Confidence 4899999987654
No 160
>3kzd_A TIAM-1, T-lymphoma invasion and metastasis-inducing prote; PDZ, cell junction, cell adhesion, signaling protein, nucleotide exchange factor; 1.30A {Homo sapiens} PDB: 3kze_A
Probab=98.97 E-value=3e-09 Score=97.86 Aligned_cols=85 Identities=22% Similarity=0.361 Sum_probs=68.7
Q ss_pred CceEEEEEEeCCC-CCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhc
Q psy6070 1301 PTLVRVSFEKGPG-KKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKK 1379 (1454)
Q Consensus 1301 pEIRTVrLqKGpG-~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKq 1379 (1454)
...+.|+|.|... ..+|||+|.+.... +..+++|..|.+||||+++| |+.||+|++|||+.+.+++++++..+|++
T Consensus 5 ~~~~~v~i~k~~~~~~~~Gf~v~~~~~~--~~~g~~V~~V~~~spA~~aG-L~~GD~Il~vng~~v~~~~~~~l~~~l~~ 81 (94)
T 3kzd_A 5 KVTHSIHIEKSDTAADTYGFSLSSVEED--GIRRLYVNSVKETGLASKKG-LKAGDEILEINNRAADALNSSMLKDFLSQ 81 (94)
T ss_dssp CEEEEEEEEC------CCSEEEEEECSS--SSCEEEEEEECTTSHHHHTT-CCTTCEEEEETTEEGGGCCHHHHHHHHHS
T ss_pred cceeEEEEEeCCCCcCCcCEEEEecCCC--CcCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhC
Confidence 3467899999862 24799999885432 23589999999999999999 99999999999999999999999999985
Q ss_pred CCCCeEEEEEEc
Q psy6070 1380 TKQGLVELVLQP 1391 (1454)
Q Consensus 1380 SGqGSVsLVVrR 1391 (1454)
. .+.|+|+.
T Consensus 82 ~---~l~ltV~~ 90 (94)
T 3kzd_A 82 P---SLGLLVRT 90 (94)
T ss_dssp S---EEEEEEEE
T ss_pred C---eEEEEEEe
Confidence 3 67777765
No 161
>2rcz_A Tight junction protein ZO-1; PDZ, domain-swapping, cell junction, membrane, phosphorylati domain, protein binding; 1.70A {Homo sapiens} PDB: 2jwe_A 2osg_A
Probab=98.96 E-value=6e-09 Score=87.47 Aligned_cols=69 Identities=29% Similarity=0.478 Sum_probs=62.3
Q ss_pred CCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcCCCCeEEEEEEcC
Q psy6070 1314 KKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKTKQGLVELVLQPN 1392 (1454)
Q Consensus 1314 ~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqSGqGSVsLVVrR~ 1392 (1454)
.+.|||.+.+ +++|..|.+||+|+++|+|+.||+|++|||+.+.+++++++..+|+..+ +.+.|+|.|.
T Consensus 12 ~~~~g~~~~~---------gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~-~~v~l~v~R~ 80 (81)
T 2rcz_A 12 NEEYGLRLAS---------HIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERSK-GKLKMVVQRD 80 (81)
T ss_dssp TCCCCEEEEE---------EEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTCCHHHHHHHHHTST-TEEEEEEEC-
T ss_pred CCCCCEEEeC---------CEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHCCC-CeEEEEEEeC
Confidence 4689998873 6999999999999999999999999999999999999999999999876 6899999774
No 162
>1wh1_A KIAA1095 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.93 E-value=4.3e-09 Score=97.38 Aligned_cols=93 Identities=24% Similarity=0.413 Sum_probs=75.2
Q ss_pred CCceEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhc
Q psy6070 1300 EPTLVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKK 1379 (1454)
Q Consensus 1300 ppEIRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKq 1379 (1454)
+.+.+.+.+.+.....+|||++....... ...+++|..|.+|+||+++|+|++||+|++|||+.+. +++++..+|+.
T Consensus 17 ~~~~~~~~~~~~~~~~~lG~~~~~~~~~~-~~~gv~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~--~~~~~~~~l~~ 93 (124)
T 1wh1_A 17 ELELEEVDLYRMNSQDKLGLTVCYRTDDE-DDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQ--NREEAVALLTS 93 (124)
T ss_dssp SCEECCBCCCCSSTTCCCCEEEECCCCCS-SCCCEEEEEECSSSHHHHTCCCCTTCEEEEESSCBCC--SHHHHHHHHTC
T ss_pred cceEEEEEEEecCCCCcccEEEEecCCCC-CCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECC--CHHHHHHHHHh
Confidence 44556677777654468999998865431 1248999999999999999999999999999999998 68999999998
Q ss_pred CCCCeEEEEEEcCCCC
Q psy6070 1380 TKQGLVELVLQPNTTE 1395 (1454)
Q Consensus 1380 SGqGSVsLVVrR~kse 1395 (1454)
..+..|.|+|.|....
T Consensus 94 ~~g~~v~l~v~R~g~~ 109 (124)
T 1wh1_A 94 EENKNFSLLIARPELQ 109 (124)
T ss_dssp SSCCSCCEEEEECSSC
T ss_pred CCCCEEEEEEEECCEE
Confidence 6446899999887543
No 163
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=98.90 E-value=9.8e-09 Score=98.22 Aligned_cols=83 Identities=22% Similarity=0.304 Sum_probs=72.6
Q ss_pred ceEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcCC
Q psy6070 1302 TLVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKTK 1381 (1454)
Q Consensus 1302 EIRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqSG 1381 (1454)
.++.|.|.|+. ..+|||.+.... .+++|..|.+||||+++| |+.||+|++|||+.+.+++++.+..+++...
T Consensus 4 ~~r~v~l~k~~-~~~lG~~~~~~~------~g~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~~ 75 (166)
T 1w9e_A 4 DPREVILCKDQ-DGKIGLRLKSID------NGIFVQLVQANSPASLVG-LRFGDQVLQINGENCAGWSSDKAHKVLKQAF 75 (166)
T ss_dssp CCEEEEEECCT-TSCCSEEEEEET------TEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHHCC
T ss_pred CCEEEEEEeCC-CCcEeEEEEeCC------CCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcCC
Confidence 45889999976 468999998752 389999999999999999 9999999999999999999988889998776
Q ss_pred CCeEEEEEEcC
Q psy6070 1382 QGLVELVLQPN 1392 (1454)
Q Consensus 1382 qGSVsLVVrR~ 1392 (1454)
+..|.|+|++.
T Consensus 76 ~~~v~l~vr~~ 86 (166)
T 1w9e_A 76 GEKITMTIRDR 86 (166)
T ss_dssp SSEEEEEEECC
T ss_pred CCEEEEEEEcC
Confidence 46899999554
No 164
>2eaq_A LIM domain only protein 7; conserved hypothetical protein, structural genomics, NPPSFA; 1.46A {Homo sapiens}
Probab=98.89 E-value=7.4e-09 Score=89.72 Aligned_cols=82 Identities=27% Similarity=0.373 Sum_probs=67.2
Q ss_pred EEEEEEeCCC-CCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcC-C
Q psy6070 1304 VRVSFEKGPG-KKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKT-K 1381 (1454)
Q Consensus 1304 RTVrLqKGpG-~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqS-G 1381 (1454)
+.+.|.+.++ ..+|||.+.... .+++|..|.+|+||+++| |+.||+|++|||+.+.+.+++++..+|+.. .
T Consensus 5 ~~~~~~~~~~~~~~lG~~~~~~~------~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~ 77 (90)
T 2eaq_A 5 MRISINQTPGKSLDFGFTIKWDI------PGIFVASVEAGSPAEFSQ-LQVDDEIIAINNTKFSYNDSKEWEEAMAKAQE 77 (90)
T ss_dssp EEEEEECCTTCSSCCSEEEEEET------TEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECCTTCHHHHHHHHHHHHH
T ss_pred eEEEEEecCCCCCcccEEEEecC------CCEEEEEECCCChHHHcC-CCCCCEEEEECCEEccCCCHHHHHHHHHhcCC
Confidence 4566666652 137999997542 379999999999999999 999999999999999888999999999853 2
Q ss_pred CCeEEEEEEcC
Q psy6070 1382 QGLVELVLQPN 1392 (1454)
Q Consensus 1382 qGSVsLVVrR~ 1392 (1454)
+..|.|+|.|.
T Consensus 78 g~~v~l~v~R~ 88 (90)
T 2eaq_A 78 TGHLVMDVRRY 88 (90)
T ss_dssp HTEEEEEEEEE
T ss_pred CCEEEEEEEeC
Confidence 26899999875
No 165
>2krg_A Na(+)/H(+) exchange regulatory cofactor NHE-RF1; acetylation, cell projection, disease mutation, membrane, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=98.85 E-value=2.9e-09 Score=109.06 Aligned_cols=84 Identities=23% Similarity=0.412 Sum_probs=73.4
Q ss_pred CceEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcC
Q psy6070 1301 PTLVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKT 1380 (1454)
Q Consensus 1301 pEIRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqS 1380 (1454)
...+.|+|.++. .||||.|.++.+. .+++|..|.+|++|+++| |+.||+|++|||+.+.++++++++.+|+..
T Consensus 8 ~~~r~v~l~k~~--~glG~~l~~~~~~----~gv~V~~V~~gSpA~~aG-L~~GD~Il~VNG~~V~~~s~~dl~~~l~~~ 80 (216)
T 2krg_A 8 LRPRLCTMKKGP--SGYGFNLHSDKSK----PGQFIRSVDPDSPAEASG-LRAQDRIVEVNGVCMEGKQHGDVVSAIRAG 80 (216)
T ss_dssp CCCEEEEEECCS--SSSCEEECCCSSS----CSCBEEEECTTSHHHHHT-CCTTCBCCEETTEECTTCCTHHHHHHHHHH
T ss_pred cceEEEEEEeCC--CCceEEEEecCCC----CCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhc
Confidence 345789999987 6899999887542 379999999999999999 999999999999999999999999999987
Q ss_pred CCCeE-EEEEEcC
Q psy6070 1381 KQGLV-ELVLQPN 1392 (1454)
Q Consensus 1381 GqGSV-sLVVrR~ 1392 (1454)
+ ..| .|+|.|.
T Consensus 81 g-~~v~~l~V~R~ 92 (216)
T 2krg_A 81 G-DETKLLVVDRE 92 (216)
T ss_dssp C-SEEEEEECCHH
T ss_pred C-CeEEEEEEEEC
Confidence 5 678 8888664
No 166
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=98.83 E-value=5.1e-10 Score=121.87 Aligned_cols=128 Identities=17% Similarity=0.247 Sum_probs=30.5
Q ss_pred CCCCCC-CCCCCceeccCCccCccCCCCCCchhhhcccCC--CCccccccccccccccCCCCCCCCCceEEEEEEeCCCC
Q psy6070 1238 NRASPN-ATNSNQALTNLTDSVSNTNQESPTSTELAKTSS--GGFGLLHSLLASRSAFRSRPQTCEPTLVRVSFEKGPGK 1314 (1454)
Q Consensus 1238 AARSPS-sTqGDRLLeVNGEDVSNASQEEpSSVqLLKkSS--gSVgLlhSiLASssvLPSRPrs~ppEIRTVrLqKGpG~ 1314 (1454)
++.... +..||+|+.+||..+.+..+.+. ..+++... ..+.+.... . + ..+.+.+.+....
T Consensus 244 pA~~aG~L~~GD~Il~VnG~~v~~~~~~~~--~~~l~~~~~~~~v~l~v~r--------~-~-----~~~~v~l~~~~~~ 307 (388)
T 3suz_A 244 PAARSGKLSIGDQIMSINGTSLVGLPLATC--QGIIKGLKNQTQVKLNIVS--------C-P-----PVTTVLIKRPDLK 307 (388)
T ss_dssp HHHHTCCCCTTCEEEEETTEECSSCCSTTH--HHHTTTCTTCSCEEEEEEE--------C-C-----SCC----------
T ss_pred HHHHcCCCCCCCEEEEECCEEccCCCHHHH--HHHHHhccCCCcccccccc--------c-c-----ccceeeEeecCCC
Confidence 333444 89999999999999999888776 45554432 223333211 1 1 1123344222122
Q ss_pred CcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcCCCCeEEEEEEcCC
Q psy6070 1315 KSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKTKQGLVELVLQPNT 1393 (1454)
Q Consensus 1315 EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqSGqGSVsLVVrR~k 1393 (1454)
.+|||.+.++ +|..|.+||+|+++| |++||+|++|||+++.+++|++++.+|+..+ +.+.|+|.+..
T Consensus 308 ~~lG~~i~~g----------~I~~V~~gs~A~~aG-L~~GD~Il~VNg~~v~~~s~~~~~~~l~~~~-~~v~L~V~p~~ 374 (388)
T 3suz_A 308 YQLGFSVQNG----------IICSLMRGGIAERGG-VRVGHRIIEINGQSVVATAHEKIVQALSNSV-GEIHMKTMPAA 374 (388)
T ss_dssp -------------------------------------------------------------------------------
T ss_pred CccceEEecC----------EEEEeecCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCC-CeEEEEEEecc
Confidence 5799987653 899999999999999 9999999999999999999999999999986 78888886643
No 167
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=98.81 E-value=2.6e-09 Score=116.33 Aligned_cols=93 Identities=27% Similarity=0.285 Sum_probs=76.7
Q ss_pred CCceEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhc
Q psy6070 1300 EPTLVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKK 1379 (1454)
Q Consensus 1300 ppEIRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKq 1379 (1454)
++..+.|.|.|..+ ++|||.|.+.... ....+++|..|.+||||+++|+|+.||+|++|||+++.+++|++++.+|+.
T Consensus 202 ~~~~~~V~i~k~~g-e~lG~~i~~~~~g-~~~~g~~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~~~~~~~~~l~~ 279 (388)
T 3suz_A 202 SENCKELQLEKHKG-EILGVVVVESGWG-SILPTVILANMMNGGPAARSGKLSIGDQIMSINGTSLVGLPLATCQGIIKG 279 (388)
T ss_dssp SSCCEEEEECCCSS-CCCCCCCBCC----CCSCCCBCCCCCCSSHHHHTCCCCTTCEEEEETTEECSSCCSTTHHHHTTT
T ss_pred cccceEEEEECCCC-CceeEEEEecCCC-CcCCCEEEEeeCCCCHHHHcCCCCCCCEEEEECCEEccCCCHHHHHHHHHh
Confidence 34568999999864 7999999884321 123469999999999999999999999999999999999999999999998
Q ss_pred CC-CCeEEEEEEcCCC
Q psy6070 1380 TK-QGLVELVLQPNTT 1394 (1454)
Q Consensus 1380 SG-qGSVsLVVrR~ks 1394 (1454)
.+ ...|.|+|.|...
T Consensus 280 ~~~~~~v~l~v~r~~~ 295 (388)
T 3suz_A 280 LKNQTQVKLNIVSCPP 295 (388)
T ss_dssp CTTCSCEEEEEEECCS
T ss_pred ccCCCccccccccccc
Confidence 74 3469999988643
No 168
>3qik_A Phosphatidylinositol 3,4,5-trisphosphate-dependen exchanger 1 protein; PDZ domain, structural genomics consortium, SGC, hydrolase R; 2.29A {Homo sapiens}
Probab=98.70 E-value=7.3e-08 Score=90.70 Aligned_cols=80 Identities=20% Similarity=0.277 Sum_probs=67.5
Q ss_pred EEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcC--C
Q psy6070 1304 VRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKT--K 1381 (1454)
Q Consensus 1304 RTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqS--G 1381 (1454)
..+.|.+.. .++||.+.... .+.+|..|.+|+||+++| |++||+|++|||..+...++++++.+|+.+ .
T Consensus 19 ~~l~l~~~~--~g~G~~l~~~~------~~~~I~~V~~gSpA~~AG-L~~GD~I~~Ing~~v~~~s~~dv~~~i~~~~~~ 89 (101)
T 3qik_A 19 KRLLILPQE--EDYGFDIEEKN------KAVVVKSVQRGSLAEVAG-LQVGRKIYSINEDLVFLRPFSEVESILNQSFCS 89 (101)
T ss_dssp EEEEECCCS--SSSSEEEEEET------TEEEEEEECTTSHHHHHT-CCTTCBEEEETTEESTTSCHHHHHHHHHHHHHT
T ss_pred CeEEEEeCC--CcccEEEEccC------CCeEEEEECCCCHHHHcC-CCCCCEEEEECCEEcCcCCHHHHHHHHHHhhcc
Confidence 456666655 68999998742 268999999999999999 999999999999999999999999999983 2
Q ss_pred CCeEEEEEEcC
Q psy6070 1382 QGLVELVLQPN 1392 (1454)
Q Consensus 1382 qGSVsLVVrR~ 1392 (1454)
+..|.|+|..+
T Consensus 90 g~~v~LLV~~~ 100 (101)
T 3qik_A 90 RRPLRLLVATK 100 (101)
T ss_dssp TCCEEEEEECC
T ss_pred CCeEEEEEecC
Confidence 37888888754
No 169
>2yub_A LIMK-2, LIM domain kinase 2; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.69 E-value=7.3e-08 Score=90.04 Aligned_cols=90 Identities=19% Similarity=0.237 Sum_probs=67.4
Q ss_pred eEEEEEEeCCCCCcccEEEEeccCCCCCCccEEEEEeCC--CChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcC
Q psy6070 1303 LVRVSFEKGPGKKSLGFSIVGGVDSPKGEMGIFVKTIFP--HGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKT 1380 (1454)
Q Consensus 1303 IRTVrLqKGpG~EGLGFSIRGGkDQP~Gd~GIFISRVIP--GGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqS 1380 (1454)
+..+.+.+... +.+||.|...........+++|..|.+ |+||+++| |+.||+|++|||+.+..++|+++..+|+..
T Consensus 16 v~l~~~~~~~~-g~~G~~v~l~~~~~~~~~gv~V~~V~~~~~spA~~aG-L~~GD~Il~Vng~~v~~~~~~dl~~~l~~~ 93 (118)
T 2yub_A 16 VTLISMPATTE-CRRGFSVTVESASSNYATTVQVKEVNRMHISPNNRNA-IHPGDRILEINGTPVRTLRVEEVEDAIKQT 93 (118)
T ss_dssp EEEEEECSCSS-SSCSSEEEEECTTSSSCCEEEEEECCTTTSCTTHHHH-CCTTCCEEEESSSBTTTSCHHHHHHHHHCC
T ss_pred eEEeccCCccC-CCceEEEEeccccccCCCcEEEEEecCCCCChHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHHhC
Confidence 33444433431 345666553221111124899999999 99999999 999999999999999999999999999987
Q ss_pred CCCeEEEEEEcCCCC
Q psy6070 1381 KQGLVELVLQPNTTE 1395 (1454)
Q Consensus 1381 GqGSVsLVVrR~kse 1395 (1454)
+..|.|+|.|....
T Consensus 94 -g~~v~l~v~R~g~~ 107 (118)
T 2yub_A 94 -SQTLQLLIEHDPVP 107 (118)
T ss_dssp -SSCEEEEEEECSSC
T ss_pred -CCEEEEEEEECCEE
Confidence 47899999886544
No 170
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=98.51 E-value=2.6e-07 Score=88.44 Aligned_cols=122 Identities=17% Similarity=0.273 Sum_probs=89.5
Q ss_pred CCCCCCCCceeccCCccCccCCCCCCchhhhcccCC-CCccccccccccccccCCCCCCCCCceEEEEEEeCCCCCcccE
Q psy6070 1241 SPNATNSNQALTNLTDSVSNTNQESPTSTELAKTSS-GGFGLLHSLLASRSAFRSRPQTCEPTLVRVSFEKGPGKKSLGF 1319 (1454)
Q Consensus 1241 SPSsTqGDRLLeVNGEDVSNASQEEpSSVqLLKkSS-gSVgLlhSiLASssvLPSRPrs~ppEIRTVrLqKGpG~EGLGF 1319 (1454)
...+..||.|+.+|+..+....++.. ..++.... ..+.+.. +.. ...+++.|.+.. ...|||
T Consensus 42 ~aGl~~GD~I~~ing~~v~~~~~~~~--~~~~~~~~~~~v~l~v---------r~~-----~~~~~v~l~~~~-~~~lG~ 104 (166)
T 1w9e_A 42 LVGLRFGDQVLQINGENCAGWSSDKA--HKVLKQAFGEKITMTI---------RDR-----PFERTITMHKDS-TGHVGF 104 (166)
T ss_dssp HTTCCTTCEEEEETTEECTTCCHHHH--HHHHHHCCSSEEEEEE---------ECC-----TTCEEEEEECCT-TSCCSE
T ss_pred HcCCCCCCEEEEECCEECCCCCHHHH--HHHHhcCCCCEEEEEE---------EcC-----CCcEEEEEecCC-CCcEeE
Confidence 34688999999999999977644222 23333222 2333331 111 134677887654 367999
Q ss_pred EEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcCCCCeEEEEEEc
Q psy6070 1320 SIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKTKQGLVELVLQP 1391 (1454)
Q Consensus 1320 SIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqSGqGSVsLVVrR 1391 (1454)
.+.. + +|..|.++++|+++| |+.||+|++|||..+.++.++++.-.++..+ ..+.|.|..
T Consensus 105 ~~~~---------g-~v~~v~~~s~a~~aG-l~~GD~I~~ing~~v~~~~~~~v~~~v~r~g-~~~~l~v~~ 164 (166)
T 1w9e_A 105 IFKN---------G-KITSIVKDSSAARNG-LLTEHNICEINGQNVIGLKDSQIADILSTSG-TVVTITIMP 164 (166)
T ss_dssp EEET---------T-EEEEECTTSHHHHTT-CCSSEEEEEETTEECTTCCHHHHHHHHHHSC-SEEEEEEEE
T ss_pred EEeC---------C-EEEEEccCCHHHHcC-CCCCCEEEEECCEECCCCChHHHHHHHhhCC-CEEEEEEEE
Confidence 9871 4 899999999999999 9999999999999999999999998888876 677777654
No 171
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=98.24 E-value=8.9e-07 Score=88.54 Aligned_cols=138 Identities=16% Similarity=0.112 Sum_probs=88.0
Q ss_pred CCCCCCCCCC-CceeccCCccCccCCCCCCchhhhcc-cCCCCccccccccccccccCCCCCCCCCceEEEEEEeCC---
Q psy6070 1238 NRASPNATNS-NQALTNLTDSVSNTNQESPTSTELAK-TSSGGFGLLHSLLASRSAFRSRPQTCEPTLVRVSFEKGP--- 1312 (1454)
Q Consensus 1238 AARSPSsTqG-DRLLeVNGEDVSNASQEEpSSVqLLK-kSSgSVgLlhSiLASssvLPSRPrs~ppEIRTVrLqKGp--- 1312 (1454)
.+....+..| |.|+.+|+..+....+.. ..+.. ..+..+.+.. ++. .....+.++|....
T Consensus 28 pA~~AGL~~G~D~I~~ing~~v~~~~~~~---~~~~~~~~g~~v~l~v--------~R~----~~~~~~~v~l~p~~~~~ 92 (209)
T 3rle_A 28 PGHRAGLEPFFDFIVSINGSRLNKDNDTL---KDLLKANVEKPVKMLI--------YSS----KTLELRETSVTPSNLWG 92 (209)
T ss_dssp HHHHTTCCTTTEEEEEETTEECCSSSSHH---HHHHHHTTTSCEEEEE--------EET----TTCCEEEEEECCCSSSS
T ss_pred HHHHCCCCcCCeEEEEECCEECcCHHHHH---HHHHhcCCCCEEEEEE--------Eec----CCceEEEEEEccccccc
Confidence 3445578888 999999999886553211 12222 2233333331 111 11233455553221
Q ss_pred CCCcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCC-CCEEEeeCCeeCCCCCHHHHHHHHhcCCCCeEEEEEEc
Q psy6070 1313 GKKSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVE-GDEILLFNNEPLQGRTHAEAITIFKKTKQGLVELVLQP 1391 (1454)
Q Consensus 1313 G~EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRV-GDRILEVNGISVEGLTHEEAVSLLKqSGqGSVsLVVrR 1391 (1454)
....||+.+..-........+++|..|.+||||+++| |+. ||.|++|||. +. +.++...+|+...+..+.|+|.|
T Consensus 93 ~~~~lGi~~~~~~~~~~~~~Gv~V~~V~~~spA~~aG-l~~~GD~I~~ing~-v~--~~~~l~~~l~~~~g~~v~l~v~r 168 (209)
T 3rle_A 93 GQGLLGVSIRFCSFDGANENVWHVLEVESNSPAALAG-LRPHSDYIIGADTV-MN--ESEDLFSLIETHEAKPLKLYVYN 168 (209)
T ss_dssp SSSSSCEEEEEEECTTGGGSCEEEEEECTTSHHHHHT-CCTTTEEEEEESSC-CC--SSSCHHHHHHHTTTSCEEEEEEE
T ss_pred ccCccceEEeecChhHccccceEEEEeCCCChHHHCC-CCCCCCEEEECCCE-eC--CHHHHHHHHHhCCCCeEEEEEEE
Confidence 1246899987532211112489999999999999999 999 9999999997 54 56677777877644689999988
Q ss_pred CCC
Q psy6070 1392 NTT 1394 (1454)
Q Consensus 1392 ~ks 1394 (1454)
...
T Consensus 169 ~~~ 171 (209)
T 3rle_A 169 TDT 171 (209)
T ss_dssp TTT
T ss_pred CCc
Confidence 643
No 172
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=98.20 E-value=5.2e-06 Score=91.64 Aligned_cols=59 Identities=20% Similarity=0.333 Sum_probs=53.8
Q ss_pred ccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcCCCCeEEEEEEcCCC
Q psy6070 1332 MGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKTKQGLVELVLQPNTT 1394 (1454)
Q Consensus 1332 ~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqSGqGSVsLVVrR~ks 1394 (1454)
.+++|..|.+|+||+++| |+.||+|++|||+.+. +.+++.++|+..+ +.+.|+|.|...
T Consensus 363 ~gv~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~--~~~~~~~~l~~~~-~~v~l~v~R~g~ 421 (436)
T 4a8c_A 363 KGIKIDEVVKGSPAAQAG-LQKDDVIIGVNRDRVN--SIAEMRKVLAAKP-AIIALQIVRGNE 421 (436)
T ss_pred CCEEEEEeCCCCHHHHcC-CCCCCEEEEECCEECC--CHHHHHHHHHhCC-CeEEEEEEECCE
Confidence 489999999999999999 9999999999999997 6799999999875 689999998754
No 173
>1fc6_A Photosystem II D1 protease; D1 C-terminal processing protease, serine protease, serine- lysine catalytic DYAD, PDZ domain, photosynthesis; 1.80A {Scenedesmus obliquus} SCOP: b.36.1.3 c.14.1.2 PDB: 1fc9_A 1fc7_A 1fcf_A
Probab=98.10 E-value=1e-05 Score=87.72 Aligned_cols=76 Identities=22% Similarity=0.330 Sum_probs=64.7
Q ss_pred CcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcCCCCeEEEEEEcCCC
Q psy6070 1315 KSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKTKQGLVELVLQPNTT 1394 (1454)
Q Consensus 1315 EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqSGqGSVsLVVrR~ks 1394 (1454)
.|+|+.+...... ..+++|..|.+|+||+++| |+.||+|++|||+.+.+++.++++.+|+...+..|.|+|.|...
T Consensus 85 ~giG~~~~~~~~~---~~~~~V~~v~~~spA~~aG-l~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~g~~v~l~v~r~g~ 160 (388)
T 1fc6_A 85 TGVGLEITYDGGS---GKDVVVLTPAPGGPAEKAG-ARAGDVIVTVDGTAVKGMSLYDVSDLLQGEADSQVEVVLHAPGA 160 (388)
T ss_dssp BBCSEEEEECTTC---SSCEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHCBSTTCEEEEEEEETTE
T ss_pred EEEEEEEEEeecC---CCcEEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcCCCCEEEEEEEeCCC
Confidence 5799998764110 1379999999999999999 99999999999999999999999999987655789999988754
No 174
>2pzd_A Serine protease HTRA2; PDZ domain, apoptosis, mitochondria, peptid module, hydrolase; 2.75A {Homo sapiens} SCOP: b.36.1.4
Probab=97.95 E-value=2e-05 Score=71.12 Aligned_cols=57 Identities=16% Similarity=0.341 Sum_probs=51.5
Q ss_pred ccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcCCCCeEEEEEEcCC
Q psy6070 1332 MGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKTKQGLVELVLQPNT 1393 (1454)
Q Consensus 1332 ~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqSGqGSVsLVVrR~k 1393 (1454)
.+++|..|.++|||+++| |++||.|++|||+.+. +.+++..+|+. + ..+.|+|.|..
T Consensus 35 ~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~--~~~~~~~~l~~-~-~~v~l~v~R~g 91 (113)
T 2pzd_A 35 HGVLIHKVILGSPAHRAG-LRPGDVILAIGEQMVQ--NAEDVYEAVRT-Q-SQLAVQIRRGR 91 (113)
T ss_dssp SCEEEEEEBTTSHHHHHT-CCTTCEEEEETTEECC--SHHHHHHHHHH-C-SSEEEEEEETT
T ss_pred CCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECC--CHHHHHHHHhC-C-CeEEEEEEECC
Confidence 489999999999999999 9999999999999998 67889999987 3 68999998864
No 175
>2kjp_A Uncharacterized protein YLBL; mixed alpha-beta protein, cell membrane, hydrolase, membrane, protease, serine protease, transmembrane; NMR {Bacillus subtilis}
Probab=97.88 E-value=1.3e-05 Score=71.83 Aligned_cols=58 Identities=17% Similarity=0.284 Sum_probs=51.0
Q ss_pred cEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcC-CCCeEEEEEEcCCC
Q psy6070 1333 GIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKT-KQGLVELVLQPNTT 1394 (1454)
Q Consensus 1333 GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqS-GqGSVsLVVrR~ks 1394 (1454)
|++|..|.+||||++ | |+.||+|++|||+.+. +.+++..+|+.. .+..|.|+|.|...
T Consensus 2 Gv~V~~V~~~spA~~-G-L~~GD~I~~InG~~v~--~~~~l~~~l~~~~~g~~v~l~v~R~g~ 60 (91)
T 2kjp_A 2 GIYASSVVENMPAKG-K-IEVGDKIISADGKNYQ--SAEKLIDYISSKKAGDKVTLKIEREEK 60 (91)
T ss_dssp CSSCCCCCCSSCCSS-C-CCSSCEEEEETTBCCS--SHHHHHHHHSSCCSSCEECEEEESSSC
T ss_pred ceEEEEECCCChHHH-c-CCCCCEEEEECCEECC--CHHHHHHHHHcCCCCCEEEEEEEECCE
Confidence 688999999999999 8 9999999999999998 567999999886 24689999998654
No 176
>3i18_A LMO2051 protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.70A {Listeria monocytogenes} PDB: 2kjk_A 3i1e_A
Probab=97.88 E-value=4.2e-05 Score=68.62 Aligned_cols=59 Identities=19% Similarity=0.250 Sum_probs=50.3
Q ss_pred ccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcC-CCCeEEEEEEcCCC
Q psy6070 1332 MGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKT-KQGLVELVLQPNTT 1394 (1454)
Q Consensus 1332 ~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqS-GqGSVsLVVrR~ks 1394 (1454)
.|++|..|.+|+||+. | |+.||+|++|||+.+. +.++...+|... .+..+.|+|.|...
T Consensus 7 ~Gv~V~~V~~~spA~~-G-L~~GD~I~~Ing~~v~--~~~dl~~~l~~~~~g~~v~l~v~R~g~ 66 (100)
T 3i18_A 7 DGVYVMSVKDDVPAAD-V-LHAGDLITEIDGNAFK--SSQEFIDYIHSKKVGDTVKINYKHGDK 66 (100)
T ss_dssp CCEEEEEECTTSGGGG-T-CCTTCEEEEETTBCCS--SHHHHHHHHHTSCTTCEEEEEEEETTE
T ss_pred CCEEEEEeCCCCchHH-C-CCCCCEEEEECCEECC--CHHHHHHHHHhCCCCCEEEEEEEECCE
Confidence 4899999999999995 8 9999999999999997 567888888864 23689999988653
No 177
>2zpm_A Regulator of sigma E protease; metalloproteinase, membrane protein, PDZ domain, hydrolase, inner membrane, membrane, metal-binding; HET: MLY MSE; 0.98A {Escherichia coli} PDB: 3id2_A 3id3_A 3id4_A
Probab=97.87 E-value=2e-05 Score=68.44 Aligned_cols=58 Identities=17% Similarity=0.378 Sum_probs=50.0
Q ss_pred cEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcCCCCeEEEEEEcCC
Q psy6070 1333 GIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKTKQGLVELVLQPNT 1393 (1454)
Q Consensus 1333 GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqSGqGSVsLVVrR~k 1393 (1454)
+++|..|.+++||+++| |+.||+|++|||+.+. +.+++...|+...+..+.|+|.|..
T Consensus 5 ~~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~--~~~~~~~~l~~~~g~~v~l~v~R~g 62 (91)
T 2zpm_A 5 EPVLENVQPNSAASXAG-LQAGDRIVXVDGQPLT--QWVTFVMLVRDNPGXSLALEIERQG 62 (91)
T ss_dssp -CBCSEECTTSHHHHTT-CCTTCEEEEETTEECC--CHHHHHHHHHHCTTCCEEEEEEETT
T ss_pred CeEEEEECCCChHHhcC-CCCCCEEEEECCeEcC--CHHHHHHHHhcCCCCeEEEEEEECC
Confidence 46889999999999999 9999999999999998 5688888888754468999998864
No 178
>2kl1_A YLBL protein; structure genomics, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; NMR {Geobacillus thermodenitrificans}
Probab=97.83 E-value=2.1e-05 Score=70.20 Aligned_cols=59 Identities=20% Similarity=0.433 Sum_probs=51.1
Q ss_pred ccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcC-CCCeEEEEEEcCCC
Q psy6070 1332 MGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKT-KQGLVELVLQPNTT 1394 (1454)
Q Consensus 1332 ~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqS-GqGSVsLVVrR~ks 1394 (1454)
.+++|..|.+||||++ | |+.||+|++|||..+. +.+++..+|+.. .+..+.|+|.|...
T Consensus 5 ~Gv~V~~V~~~spA~~-G-L~~GD~Il~InG~~v~--~~~~l~~~l~~~~~g~~v~l~v~R~g~ 64 (94)
T 2kl1_A 5 KGVYVMSVLPNMPAAG-R-LEAGDRIAAIDGQPIN--TSEQIVSYVREKQAGDRVRVTFIRDRK 64 (94)
T ss_dssp CCEECCCCCTTSTTBT-T-BCTTCEEEEETTBCCC--CHHHHHHHHHHSCTTCCEEEEEEETTE
T ss_pred CcEEEEEECCCChHHh-C-CCCCCEEEEECCEECC--CHHHHHHHHHhCCCCCEEEEEEEECCE
Confidence 4799999999999999 8 9999999999999997 467888888875 23689999998653
No 179
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=97.82 E-value=3.5e-05 Score=85.84 Aligned_cols=58 Identities=19% Similarity=0.227 Sum_probs=52.7
Q ss_pred ccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcCCCCeEEEEEEcCC
Q psy6070 1332 MGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKTKQGLVELVLQPNT 1393 (1454)
Q Consensus 1332 ~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqSGqGSVsLVVrR~k 1393 (1454)
.|++|..|.+||+|+++| |+.||+|++|||+.+. +.++..++|+..+ ..+.|+|.|..
T Consensus 386 ~Gv~V~~V~~gspA~~aG-L~~GD~I~~Vng~~v~--~~~~~~~~l~~~~-~~v~l~v~R~g 443 (451)
T 3pv2_A 386 IGVQVVGASENSAGWRAG-IRPGDIIISANKKPVT--DVKSLQTIAQEKK-KELLVQVLRGP 443 (451)
T ss_dssp EEEEEEEECTTSHHHHHT-CCTTCEEEEETTEECC--SHHHHHHHTTSSC-SCEEEEEEETT
T ss_pred CceEEEEECCCCHHHHcC-CCCCCEEEEECCEECC--CHHHHHHHHhcCC-CeEEEEEEECC
Confidence 479999999999999999 9999999999999997 6689999999864 78999998864
No 180
>3id1_A Regulator of sigma E protease; hydrolase, cell inner membrane, cell membrane, membrane, metal-binding, metalloprotease, transmembrane; 1.67A {Escherichia coli k-12} PDB: 2zpl_A
Probab=97.81 E-value=5e-05 Score=68.07 Aligned_cols=58 Identities=14% Similarity=0.103 Sum_probs=49.8
Q ss_pred EEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcCCC-CeEEEEEEcCCC
Q psy6070 1334 IFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKTKQ-GLVELVLQPNTT 1394 (1454)
Q Consensus 1334 IFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqSGq-GSVsLVVrR~ks 1394 (1454)
-+|..|.+||||+++| |+.||+|++|||+.+. +.+++...|..... ..+.|+|.|...
T Consensus 4 p~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~--~~~d~~~~l~~~~~~~~v~l~v~R~g~ 62 (95)
T 3id1_A 4 PVVGEIAANSIAAEAQ-IAPGTELKAVDGIETP--DWDAVRLQLVDKIGDESTTITVAPFGS 62 (95)
T ss_dssp CBEEEECTTSHHHHTT-CCTTCEEEEETTEECS--SHHHHHHHHHHTTTCSEEEEEEECTTC
T ss_pred CEEEeeCCCCHHHHcC-CCCCCEEEEECCEECC--CHHHHHHHHHHhcCCCcEEEEEEECCC
Confidence 3688999999999999 9999999999999998 66788888876543 589999998764
No 181
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=97.79 E-value=3e-05 Score=77.65 Aligned_cols=73 Identities=15% Similarity=0.130 Sum_probs=52.6
Q ss_pred cccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCC-CEEEeeCCeeCCCCCHHHHHHHHhcCCCCeEEEEEEcCC
Q psy6070 1316 SLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEG-DEILLFNNEPLQGRTHAEAITIFKKTKQGLVELVLQPNT 1393 (1454)
Q Consensus 1316 GLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVG-DRILEVNGISVEGLTHEEAVSLLKqSGqGSVsLVVrR~k 1393 (1454)
|+|++...+.+. ..|++|..|.++|||+++| |+.| |+|++|||+.+.....-.. .+++...+..|.|+|.|..
T Consensus 3 g~~~~~~~~~~~---~~G~~V~~V~~~SpA~~AG-L~~G~D~I~~ing~~v~~~~~~~~-~~~~~~~g~~v~l~v~R~~ 76 (209)
T 3rle_A 3 GSSQSVEIPGGG---TEGYHVLRVQENSPGHRAG-LEPFFDFIVSINGSRLNKDNDTLK-DLLKANVEKPVKMLIYSSK 76 (209)
T ss_dssp -----CCCTTSS---SEEEEEEEECTTSHHHHTT-CCTTTEEEEEETTEECCSSSSHHH-HHHHHTTTSCEEEEEEETT
T ss_pred chhhhhhccCCC---CCEEEEEEECCCCHHHHCC-CCcCCeEEEEECCEECcCHHHHHH-HHHhcCCCCEEEEEEEecC
Confidence 455555444332 4589999999999999999 9999 9999999999987765433 4444443468999998864
No 182
>2l97_A HTRA, putative serine protease; HTRA-PDZ, protein binding; NMR {Streptococcus pneumoniae}
Probab=97.77 E-value=6.5e-05 Score=71.00 Aligned_cols=59 Identities=12% Similarity=0.186 Sum_probs=50.5
Q ss_pred ccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcC-CCCeEEEEEEcCCC
Q psy6070 1332 MGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKT-KQGLVELVLQPNTT 1394 (1454)
Q Consensus 1332 ~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqS-GqGSVsLVVrR~ks 1394 (1454)
.+++|..|.+||||+ +| |+.||+|++|||+.+. +.++...+|... .+..+.|+|.|...
T Consensus 57 ~g~~V~~V~~~spA~-aG-L~~GD~I~~inG~~v~--~~~~l~~~l~~~~~g~~v~l~v~R~g~ 116 (134)
T 2l97_A 57 SGVIVRSVQSNMPAN-GH-LEKYDVITKVDDKEIA--SSTDLQSALYNHSIGDTIKITYYRNGK 116 (134)
T ss_dssp SCEEEEECSTTSGGG-TT-SCSSCEEEEETTEECC--CHHHHHHHHHHSSTTCEEEEEEEETTE
T ss_pred CCEEEEEECCCCchH-HC-CCCCCEEEEECCEEcC--CHHHHHHHHHhCCCCCEEEEEEEECCE
Confidence 489999999999999 99 9999999999999998 457788888775 23689999988653
No 183
>2p3w_A Probable serine protease HTRA3; PDZ domain, phage derived high affinity ligand, protein BIND; 1.70A {Homo sapiens}
Probab=97.73 E-value=8.3e-05 Score=67.27 Aligned_cols=57 Identities=23% Similarity=0.414 Sum_probs=50.0
Q ss_pred ccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcCCCCeEEEEEEcCC
Q psy6070 1332 MGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKTKQGLVELVLQPNT 1393 (1454)
Q Consensus 1332 ~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqSGqGSVsLVVrR~k 1393 (1454)
.+++|..|.+++||+++| |+.||+|++|||+.+. +..++...|+. + ..+.|+|.|..
T Consensus 35 ~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~--~~~~~~~~l~~-g-~~v~l~v~R~g 91 (112)
T 2p3w_A 35 SGIYVQEVAPNSPSQRGG-IQDGDIIVKVNGRPLV--DSSELQEAVLT-E-SPLLLEVRRGN 91 (112)
T ss_dssp SSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECC--SHHHHHHHHHH-C-SSEEEEEEETT
T ss_pred CCeEEEEECCCChHHHCC-CCCCCEEEEECCEECC--CHHHHHHHHhC-C-CeEEEEEEECC
Confidence 489999999999999999 9999999999999997 56888888854 3 58999998864
No 184
>2i6v_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.63A {Vibrio cholerae} SCOP: b.36.1.5
Probab=97.70 E-value=5.7e-05 Score=66.08 Aligned_cols=58 Identities=19% Similarity=0.160 Sum_probs=48.3
Q ss_pred cEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcCC-CCeEEEEEEcCC
Q psy6070 1333 GIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKTK-QGLVELVLQPNT 1393 (1454)
Q Consensus 1333 GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqSG-qGSVsLVVrR~k 1393 (1454)
|+.|..+.++++|+++| |+.||.|++|||+.+. +.++...+++... +..+.|+|.|..
T Consensus 20 G~~V~~~~~~s~A~~aG-l~~GD~I~~ing~~v~--~~~d~~~~~~~~~~g~~v~l~v~R~g 78 (87)
T 2i6v_A 20 GYRVSPGKDPVLFESIG-LQDGDMAVALNGLDLT--DPNVMNTLFQSMNEMTEMSLTVERDG 78 (87)
T ss_dssp EEEEEECSCHHHHHHTT-CCTTCEEEEETTEETT--CHHHHHHHHHTGGGCSEEEEEEEETT
T ss_pred EEEEEeCCCCCHHHHCC-CCCCCEEEEECCEECC--CHHHHHHHHHhcCCCCEEEEEEEECC
Confidence 67888899999999999 9999999999999998 5677777776532 368999998864
No 185
>3k50_A Putative S41 protease; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=97.56 E-value=7.7e-05 Score=82.82 Aligned_cols=74 Identities=12% Similarity=0.300 Sum_probs=58.3
Q ss_pred CcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcCCCCeEEEEEEcCCC
Q psy6070 1315 KSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKTKQGLVELVLQPNTT 1394 (1454)
Q Consensus 1315 EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqSGqGSVsLVVrR~ks 1394 (1454)
.||||.+....+. .....++|..|.+||||+++| |+.||+|++|||+.+.++. +..+|+. .+..|.|+|.|...
T Consensus 74 ~G~~~~l~~~~~~-~~~~~~~V~~V~~gsPA~~AG-L~~GD~I~~InG~~v~~~~---~~~~l~~-~g~~v~l~v~R~g~ 147 (403)
T 3k50_A 74 YGFDYTLYKVLDN-DTAYNALISYVVPGSPAEEAG-LQRGHWIMMMNGDYITKKV---ESELLQG-STRQLQIGVYKEVV 147 (403)
T ss_dssp CSEEEEEEECTTC-SSCEEEEEEEECTTSHHHHTT-CCTTCEEEEETTBCBCTTT---GGGGTSC-SCEEEEEEEEEEEC
T ss_pred cceEEEEEEcCCC-CcceeEEEEEeCCCChHHHcC-CCCCCEEEEECCEEccchh---HHHHhhC-CCCEEEEEEEeCCc
Confidence 4788887764321 111248999999999999999 9999999999999999885 6677777 44689999988654
No 186
>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A
Probab=97.54 E-value=0.00029 Score=74.12 Aligned_cols=71 Identities=20% Similarity=0.380 Sum_probs=57.6
Q ss_pred cccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcC-CCCeEEEEEEc-CC
Q psy6070 1316 SLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKT-KQGLVELVLQP-NT 1393 (1454)
Q Consensus 1316 GLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqS-GqGSVsLVVrR-~k 1393 (1454)
.||+.+..... ..+++|..|.+|+||+++| |+.||+|++|||+.+. +..+...+|... .+..|.|+|.| ..
T Consensus 230 ~lGi~~~~~~~----~~g~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~--~~~~l~~~l~~~~~g~~v~l~v~R~~g 302 (324)
T 1y8t_A 230 SLGVQVTNDKD----TLGAKIVEVVAGGAAANAG-VPKGVVVTKVDDRPIN--SADALVAAVRSKAPGATVALTFQDPSG 302 (324)
T ss_dssp ECCEEEESCSS----SSSEEEEEECTTSTTTTTT-CCTTCEEEEETTEECC--SHHHHHHHHHTSCTTCEEEEEEECSSC
T ss_pred ccceEeeeccC----CCceEEEEECCCChHHHcC-CCCCCEEEEECCEECC--CHHHHHHHHHhcCCCCEEEEEEEECCC
Confidence 58888865321 2489999999999999999 9999999999999998 557788888653 23689999998 54
No 187
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}
Probab=97.49 E-value=0.00015 Score=83.85 Aligned_cols=71 Identities=15% Similarity=0.206 Sum_probs=56.1
Q ss_pred CcccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcC-CCCeEEEEEEcCC
Q psy6070 1315 KSLGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKT-KQGLVELVLQPNT 1393 (1454)
Q Consensus 1315 EGLGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqS-GqGSVsLVVrR~k 1393 (1454)
.+||+.+.... .+++|..|.+||||+++| |++||+|++|||..+.. ++..++|+.. .+..|.|+|.|..
T Consensus 485 ~~lG~~~~~~~------~gv~V~~V~~~spA~~AG-L~~GD~I~aInG~~v~~---~~l~~~l~~~~~g~~v~l~v~R~g 554 (597)
T 4fgm_A 485 VNFGAKYKASP------QGLDVLNVYHDESAYHAG-LSAGDKIIAIDHLQATE---QSVKRILERYIPGDTVTIHAFRRD 554 (597)
T ss_dssp CCCSEEEEEET------TEEEEEEECTTSHHHHHT-CCTTCEEEEETTEECCT---TTHHHHHTTCCTTCEEEEEEEETT
T ss_pred cccceEEeccC------CeEEEEEeCCCChHHHCC-CCCCCEEEEECCEECCH---HHHHHHHHhcCCCCEEEEEEEECC
Confidence 36999987642 279999999999999999 99999999999999954 4445555542 2368999999976
Q ss_pred CC
Q psy6070 1394 TE 1395 (1454)
Q Consensus 1394 se 1395 (1454)
..
T Consensus 555 ~~ 556 (597)
T 4fgm_A 555 EL 556 (597)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 188
>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A
Probab=97.48 E-value=0.00022 Score=75.15 Aligned_cols=60 Identities=23% Similarity=0.422 Sum_probs=52.3
Q ss_pred ccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhc-CCCCeEEEEEEcCCC
Q psy6070 1332 MGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKK-TKQGLVELVLQPNTT 1394 (1454)
Q Consensus 1332 ~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKq-SGqGSVsLVVrR~ks 1394 (1454)
.+++|..|.+|+||+++| |+.||+|++|||+.+. +.++...+|+. ..+..|.|+|.|...
T Consensus 244 ~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~--~~~~l~~~l~~~~~g~~v~l~v~R~g~ 304 (318)
T 1te0_A 244 QGIVVNEVSPDGPAANAG-IQVNDLIISVDNKPAI--SALETMDQVAEIRPGSVIPVVVMRDDK 304 (318)
T ss_dssp CCEEEEEECTTSTTTTTC-CCTTCCEEEETTEECC--CHHHHHHHHHTSCTTCEEEEEEESSSC
T ss_pred CcEEEEEeCCCChHHHCC-CCCCCEEEEECCEEcC--CHHHHHHHHHhcCCCCEEEEEEEECCE
Confidence 489999999999999999 9999999999999998 46888888886 334689999998754
No 189
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=97.47 E-value=3.3e-05 Score=85.98 Aligned_cols=70 Identities=21% Similarity=0.306 Sum_probs=0.0
Q ss_pred ccEEEEeccCCCCCCccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcCCCCeEEEEEEcCCC
Q psy6070 1317 LGFSIVGGVDSPKGEMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKTKQGLVELVLQPNTT 1394 (1454)
Q Consensus 1317 LGFSIRGGkDQP~Gd~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqSGqGSVsLVVrR~ks 1394 (1454)
+|+.+..-. ...+++|..|.+|++|+++| |+.||+|++|||+.+. +++++.++|+... +.+.|+|.|...
T Consensus 372 ~G~~l~~~~----~~~gv~V~~V~~gspA~~aG-L~~GDiI~~vng~~v~--~~~~l~~~l~~~~-~~v~l~v~R~g~ 441 (448)
T 1ky9_A 372 EGAEMSNKG----KDQGVVVNNVKTGTPAAQIG-LKKGDVIIGANQQAVK--NIAELRKVLDSKP-SVLALNIQRGDS 441 (448)
T ss_dssp ------------------------------------------------------------------------------
T ss_pred cceEeeccC----CCCeEEEEEecCCCHHHHcC-CCCCCEEEEECCEECC--CHHHHHHHHHcCC-CeEEEEEEECCE
Confidence 477664321 12479999999999999999 9999999999999998 6789999998875 588898888653
No 190
>3stj_A Protease DEGQ; serine protease, PDZ domain, protease, chaperone, DEGP, DEGQ hydrolase; 2.60A {Escherichia coli}
Probab=97.40 E-value=0.00031 Score=75.84 Aligned_cols=61 Identities=31% Similarity=0.422 Sum_probs=53.4
Q ss_pred ccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcC-CCCeEEEEEEcCCCC
Q psy6070 1332 MGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKT-KQGLVELVLQPNTTE 1395 (1454)
Q Consensus 1332 ~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqS-GqGSVsLVVrR~kse 1395 (1454)
.|++|..|.+||||+++| |+.||+|++|||+.+. +.++...+|+.. .+..|.|+|.|....
T Consensus 263 ~G~~V~~V~~~spA~~aG-L~~GDvI~~ing~~v~--~~~~l~~~l~~~~~g~~v~l~v~R~g~~ 324 (345)
T 3stj_A 263 RGAFVSEVLPGSGSAKAG-VKAGDIITSLNGKPLN--SFAELRSRIATTEPGTKVKLGLLRNGKP 324 (345)
T ss_dssp SSEEEEEECTTSHHHHHT-CCTTCEECEETTEECS--CHHHHHHHHHTSCTTCEEEEEEEETTEE
T ss_pred ceEEEEEeccCChHHHcC-CCCCCEEEEECCEECC--CHHHHHHHHHhcCCCCEEEEEEEECCEE
Confidence 489999999999999999 9999999999999998 678888888764 346899999997543
No 191
>2i4s_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.92A {Vibrio cholerae} SCOP: b.36.1.5
Probab=97.35 E-value=0.0003 Score=63.62 Aligned_cols=58 Identities=19% Similarity=0.164 Sum_probs=45.6
Q ss_pred cEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcC-CCCeEEEEEEcCC
Q psy6070 1333 GIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKT-KQGLVELVLQPNT 1393 (1454)
Q Consensus 1333 GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqS-GqGSVsLVVrR~k 1393 (1454)
|+.|..+.++++|+++| |+.||.|++|||+.+..+ +++..++... .+..+.|+|.|..
T Consensus 38 G~~V~~~~pas~A~~aG-l~~GDvI~~ing~~v~~~--~d~~~~~~~~~~g~~v~l~v~R~g 96 (105)
T 2i4s_A 38 GYRVSPGKDPVLFESIG-LQDGDMAVALNGLDLTDP--NVMNTLFQSMNEMTEMSLTVERDG 96 (105)
T ss_dssp EEEEEECSCTHHHHHHT-CCTTCEEEEETTEETTST--THHHHHHHHHTTCSEEEEEEEETT
T ss_pred EEEEecCCCCCHHHHcC-CCCCCEEEEECCEECCCH--HHHHHHHHhcCCCCeEEEEEEECC
Confidence 56788888888999999 999999999999999865 4444555532 2368999998864
No 192
>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1
Probab=97.28 E-value=0.00049 Score=73.05 Aligned_cols=58 Identities=16% Similarity=0.335 Sum_probs=51.9
Q ss_pred ccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcCCCCeEEEEEEcCCC
Q psy6070 1332 MGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKTKQGLVELVLQPNTT 1394 (1454)
Q Consensus 1332 ~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqSGqGSVsLVVrR~ks 1394 (1454)
.|++|..|.+|+||+++| |+.||.|++|||+.+. +.++...+|+. + ..|.|+|.|...
T Consensus 256 ~gv~V~~V~~~spA~~aG-l~~GDvI~~ing~~v~--~~~~l~~~l~~-~-~~v~l~v~R~g~ 313 (325)
T 1lcy_A 256 HGVLIHKVILGSPAHRAG-LRPGDVILAIGEQMVQ--NAEDVYEAVRT-Q-SQLAVQIRRGRE 313 (325)
T ss_dssp SCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECC--SHHHHHHHHTT-C-SSEEEEEEETTE
T ss_pred CCeEEEEeCcCChHHHCC-CCCCCEEEEECCEEcC--CHHHHHHHHhC-C-CeEEEEEEECCE
Confidence 489999999999999999 9999999999999997 67888999987 3 589999998653
No 193
>2hga_A Conserved protein MTH1368; GFT structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: b.36.1.6
Probab=97.25 E-value=0.00083 Score=63.66 Aligned_cols=58 Identities=17% Similarity=0.233 Sum_probs=48.7
Q ss_pred ccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcC-CCCeEEEEEEcCCC
Q psy6070 1332 MGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKT-KQGLVELVLQPNTT 1394 (1454)
Q Consensus 1332 ~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqS-GqGSVsLVVrR~ks 1394 (1454)
.+++|..|.+|+||+++ |+.||+|++|||+.+. +.++...+|+.. .+..|.|+| |...
T Consensus 25 ~gv~V~~V~~~spA~~a--L~~GD~Il~InG~~v~--~~~dl~~~l~~~~~g~~v~l~V-R~g~ 83 (125)
T 2hga_A 25 DGVQIDSVVPGSPASKV--LTPGLVIESINGMPTS--NLTTYSAALKTISVGEVINITT-DQGT 83 (125)
T ss_dssp CCEEEEEECSSSGGGGT--SCTTCEEEEETTEECS--SHHHHHHHHTTCCTTCEEEEEE-TTEE
T ss_pred CceEEEEECCCChHHHh--cCCCCEEEEECCEEcC--CHHHHHHHHHhcCCCCEEEEEE-ECCE
Confidence 37999999999999998 9999999999999998 567888888742 236899999 7543
No 194
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=97.14 E-value=0.00058 Score=75.52 Aligned_cols=61 Identities=31% Similarity=0.409 Sum_probs=50.5
Q ss_pred ccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcCC-CCeEEEEEEcCCCC
Q psy6070 1332 MGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKTK-QGLVELVLQPNTTE 1395 (1454)
Q Consensus 1332 ~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqSG-qGSVsLVVrR~kse 1395 (1454)
.|++|..|.+||||+++| |+.||+|++|||+.+..+ ++...+|.... +..|.|+|.|....
T Consensus 263 ~G~~V~~V~~~spA~~aG-L~~GD~I~~vnG~~v~~~--~~l~~~l~~~~~g~~v~l~v~R~g~~ 324 (436)
T 4a8c_A 263 RGAFVSEVLPGSGSAKAG-VKAGDIITSLNGKPLNSF--AELRSRIATTEPGTKVKLGLLRNGKP 324 (436)
T ss_pred cceEEEEECCCChHHHCC-CCCCCEEEEECCEECCCH--HHHHHHHHhcCCCCEEEEEEEECCEE
Confidence 489999999999999999 999999999999999854 56666665432 36899999987543
No 195
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=97.10 E-value=0.00094 Score=78.36 Aligned_cols=70 Identities=10% Similarity=0.030 Sum_probs=59.8
Q ss_pred CcccEEEEeccCCCCCCccEEEEEeCCC--------ChhhhcC-CCCCCCEEEeeCCeeCCCCCHHHHHHHHhcCCCCeE
Q psy6070 1315 KSLGFSIVGGVDSPKGEMGIFVKTIFPH--------GQAAESG-LLVEGDEILLFNNEPLQGRTHAEAITIFKKTKQGLV 1385 (1454)
Q Consensus 1315 EGLGFSIRGGkDQP~Gd~GIFISRVIPG--------GPADRDG-RLRVGDRILEVNGISVEGLTHEEAVSLLKqSGqGSV 1385 (1454)
.++|+.+.-.. .+++|..|.+| +||+++| .|+ ||+|++|||+.+.++. +++.+|+...+..|
T Consensus 737 ~g~G~~~~~~~------~~~~v~~v~~~~~~~~~~~spa~~ag~~l~-GD~I~~i~g~~~~~~~--~~~~~~~~~~g~~v 807 (1045)
T 1k32_A 737 GRIACDFKLDG------DHYVVAKAYAGDYSNEGEKSPIFEYGIDPT-GYLIEDIDGETVGAGS--NIYRVLSEKAGTSA 807 (1045)
T ss_dssp CBCSEEEEEET------TEEEEEEECBSCTTSTTCBCGGGGGTCCCT-TCEEEEETTEECBTTB--CHHHHHHTTTTSEE
T ss_pred ceecEEEEEeC------CEEEEEEecCCCcccccCCChHHHCCCCcC-CCEEEEECCEEccchh--hHHHhhcCCCCCEE
Confidence 47898887532 27999999998 9999999 489 9999999999999886 78889988766799
Q ss_pred EEEEEcCC
Q psy6070 1386 ELVLQPNT 1393 (1454)
Q Consensus 1386 sLVVrR~k 1393 (1454)
.|+|.|..
T Consensus 808 ~l~v~r~~ 815 (1045)
T 1k32_A 808 RIRLSGKG 815 (1045)
T ss_dssp EEEEECSS
T ss_pred EEEEECCC
Confidence 99999865
No 196
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=97.08 E-value=0.0011 Score=73.99 Aligned_cols=61 Identities=20% Similarity=0.322 Sum_probs=51.5
Q ss_pred ccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcC-CCCeEEEEEEcCCCC
Q psy6070 1332 MGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKT-KQGLVELVLQPNTTE 1395 (1454)
Q Consensus 1332 ~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqS-GqGSVsLVVrR~kse 1395 (1454)
.|++|..|.+||||+++| |+.||+|++|||+.+. +.++...+|... .+..|.|+|.|....
T Consensus 282 ~G~~V~~V~~~spA~~aG-L~~GDvI~~vnG~~v~--~~~~l~~~l~~~~~g~~v~l~V~R~g~~ 343 (451)
T 3pv2_A 282 QGALVSQVNPNSPAELAG-LKAGDIITQINDTKIT--QATQVKTTISLLRVGSTVKIIVERDNKP 343 (451)
T ss_dssp CCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECC--SHHHHHHHHHTSCTTCEEEEEEEETTEE
T ss_pred ceEEEEecCCCChHHHcC-CCCCCEEEEECCEEcC--CHHHHHHHHHhcCCCCEEEEEEEECCEE
Confidence 489999999999999999 9999999999999998 456777777653 236899999987544
No 197
>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}
Probab=97.06 E-value=0.00098 Score=71.38 Aligned_cols=61 Identities=23% Similarity=0.340 Sum_probs=52.0
Q ss_pred ccEEEEEeCCCChhhhcCCCCC-----------CCEEEeeCCeeCCCCCHHHHHHHHhcCC-CCeEEEEEEcCCCC
Q psy6070 1332 MGIFVKTIFPHGQAAESGLLVE-----------GDEILLFNNEPLQGRTHAEAITIFKKTK-QGLVELVLQPNTTE 1395 (1454)
Q Consensus 1332 ~GIFISRVIPGGPADRDGRLRV-----------GDRILEVNGISVEGLTHEEAVSLLKqSG-qGSVsLVVrR~kse 1395 (1454)
.|++|..|.+||||+++| |+. ||+|++|||+.+..+ ++...+|.... +..|.|+|.|....
T Consensus 251 ~Gv~V~~V~~~spA~~AG-l~~~~~~~~~~l~~GDvI~~ing~~v~~~--~dl~~~l~~~~~g~~v~l~v~R~g~~ 323 (348)
T 3qo6_A 251 SGVLVLDAPPSGPAGKAG-LQSTKRDGYGRLVLGDIITSVNGTKVSNG--SDLYRILDQCKVGDEVTVEVLRGDHK 323 (348)
T ss_dssp SSEEEEECCSSSHHHHHT-CCCCEECSSSCEECCCEECEETTBCCSSS--HHHHHHHTTCCTTCEEEEEEECSSSE
T ss_pred ceEEEEEecCCChHHHcC-CccccccccCCCCCCCEEEEECCEEeCCH--HHHHHHHHhCCCcCEEEEEEEECCEE
Confidence 489999999999999999 998 999999999999844 78888886532 36899999987543
No 198
>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A
Probab=96.71 E-value=0.00025 Score=75.14 Aligned_cols=59 Identities=19% Similarity=0.445 Sum_probs=0.0
Q ss_pred ccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcCCCCeEEEEEEcCCCC
Q psy6070 1332 MGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKTKQGLVELVLQPNTTE 1395 (1454)
Q Consensus 1332 ~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqSGqGSVsLVVrR~kse 1395 (1454)
.|++|..|.+|+||+++| |+.||+|++|||+.+. +.++...+|+. + ..|.|+|.|....
T Consensus 254 ~g~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~--~~~~~~~~l~~-~-~~v~l~v~R~g~~ 312 (332)
T 3num_A 254 SGAYIIEVIPDTPAEAGG-LKENDVIISINGQSVV--SANDVSDVIKR-E-STLNMVVRRGNED 312 (332)
T ss_dssp ----------------------------------------------------------------
T ss_pred CceEEEEeccCCChHHcC-CCCCCEEEEECCEECC--CHHHHHHHHhC-C-CeEEEEEEECCEE
Confidence 479999999999999999 9999999999999996 56777888876 3 5799999886543
No 199
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=96.36 E-value=0.002 Score=71.87 Aligned_cols=60 Identities=25% Similarity=0.367 Sum_probs=50.7
Q ss_pred ccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcC-CCCeEEEEEEcCCC
Q psy6070 1332 MGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKT-KQGLVELVLQPNTT 1394 (1454)
Q Consensus 1332 ~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqS-GqGSVsLVVrR~ks 1394 (1454)
.+++|..|.+|+||+++| |+.||+|++|||+.+..+ .+...+|... .+..|.|+|.|...
T Consensus 286 ~G~~V~~V~~gspA~~AG-L~~GDvI~~inG~~v~~~--~~l~~~l~~~~~g~~v~l~v~R~g~ 346 (448)
T 1ky9_A 286 RGAFVSQVLPNSSAAKAG-IKAGDVITSLNGKPISSF--AALRAQVGTMPVGSKLTLGLLRDGK 346 (448)
T ss_dssp CSEECCCCTTCSSSTTTT-CCTTCEECBSSSSBCCSS--HHHHHHTTSSBTTCCCEEEEESSSC
T ss_pred CceEEEEeccCCHHHHcC-CCCCCEEEEECCEEcCCH--HHHHHHHHhcCCCCEEEEEEEECCE
Confidence 489999999999999999 999999999999999865 6777777652 23689999988654
No 200
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=94.14 E-value=0.085 Score=61.18 Aligned_cols=58 Identities=10% Similarity=0.201 Sum_probs=50.8
Q ss_pred CccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCHHHHHHHHhcCCCCeEEEEEEc
Q psy6070 1331 EMGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTHAEAITIFKKTKQGLVELVLQP 1391 (1454)
Q Consensus 1331 d~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTHEEAVSLLKqSGqGSVsLVVrR 1391 (1454)
..+++|++|.++++|...| ++.||+|++|||+.+. +.++..++|+.+...-+.|.+..
T Consensus 414 ~~gVvvs~V~~~s~a~~~g-~~~gdiI~~vNg~~V~--s~~~l~~~l~~~k~~~l~~~~~~ 471 (539)
T 4fln_A 414 EQIVILSQVLANEVNIGYE-DMNNQQVLKFNGIPIR--NIHHLAHLIDMCKDKYLVFEFED 471 (539)
T ss_dssp CCCEEEEEECCCGGGTTCS-SCCSEEEEEETTEECC--SHHHHHHHHHTCCSSEEEEEETT
T ss_pred ceEEEEEEecCCchhhhcC-CCCCCEEEeECCEEcC--CHHHHHHHHHHcCCCeEEEEECC
Confidence 4589999999999999999 9999999999999998 78899999999986666666543
No 201
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=93.72 E-value=0.089 Score=61.03 Aligned_cols=62 Identities=18% Similarity=0.275 Sum_probs=45.5
Q ss_pred ccEEEEEeCCCChhhhcCCCCCCCEEEeeCCeeCCCCCH--------HHHHHHHhcC-CCCeEEEEEEcCCCC
Q psy6070 1332 MGIFVKTIFPHGQAAESGLLVEGDEILLFNNEPLQGRTH--------AEAITIFKKT-KQGLVELVLQPNTTE 1395 (1454)
Q Consensus 1332 ~GIFISRVIPGGPADRDGRLRVGDRILEVNGISVEGLTH--------EEAVSLLKqS-GqGSVsLVVrR~kse 1395 (1454)
.|++|..|.+||||++ + |+.||.|++|||+.+..... .....+|... .+..|.|+|.|....
T Consensus 277 ~Gv~V~~V~~~spA~~-a-l~~GDvI~~idg~~V~~~g~~~~~~~~~~~l~~~v~~~~~Gd~v~l~v~R~Gk~ 347 (539)
T 4fln_A 277 EGVLVRRVEPTSDASK-V-LKEGDVIVSFDDLHVGCEGTVPFRSSERIAFRYLISQKFAGDIAEIGIIRAGEH 347 (539)
T ss_dssp BCEEEEEECTTSGGGG-T-CCTTCEEEEETTEECBSSSEEECSTTCEEETHHHHHTSCTTCEEEEEEEETTEE
T ss_pred CceeeecccCCChHHh-C-ccCCCEEEEECCEEeCcCCeeccccchhHHHHHHHHcCCCCCEEEEEEEECCEE
Confidence 5899999999999986 5 99999999999999964321 1112233222 236999999997654
No 202
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=27.83 E-value=8.1 Score=34.72 Aligned_cols=41 Identities=10% Similarity=0.008 Sum_probs=32.0
Q ss_pred CCCCCCCCCceeccCCccCccCCCCCCchhhhcccCCCCcccc
Q psy6070 1240 ASPNATNSNQALTNLTDSVSNTNQESPTSTELAKTSSGGFGLL 1282 (1454)
Q Consensus 1240 RSPSsTqGDRLLeVNGEDVSNASQEEpSSVqLLKkSSgSVgLl 1282 (1454)
....+..||+|++||+.++...+|+++ +.+++.++..+.+.
T Consensus 37 ~~aGl~~GD~Il~VNG~~v~~~~~~ev--v~llr~~g~~V~L~ 77 (82)
T 1r6j_A 37 ARNGLLTEHNICEINGQNVIGLKDSQI--ADILSTSGTVVTIT 77 (82)
T ss_dssp HHHTCCSSEEEEEETTEECTTCCHHHH--HHHHHHSCSEEEEE
T ss_pred HHcCCCCCCEEEEECCEEcCCCCHHHH--HHHHhcCCCEEEEE
Confidence 333577999999999999999999888 77777655555543
No 203
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=27.29 E-value=12 Score=35.08 Aligned_cols=37 Identities=3% Similarity=-0.106 Sum_probs=30.9
Q ss_pred CCCCCCCCCCCceeccCCccCccCCCCCCchhhhcccCC
Q psy6070 1238 NRASPNATNSNQALTNLTDSVSNTNQESPTSTELAKTSS 1276 (1454)
Q Consensus 1238 AARSPSsTqGDRLLeVNGEDVSNASQEEpSSVqLLKkSS 1276 (1454)
+.++..+..||.|++||+.++.+.+|.++ +.+++...
T Consensus 41 a~r~g~L~vGD~I~~VNG~~v~g~~h~ev--v~lLk~~~ 77 (95)
T 3gge_A 41 IDSVKTICVGDHIESINGENIVGWRHYDV--AKKLKELK 77 (95)
T ss_dssp HHHCTTCCTTCEEEEETTEECTTCCHHHH--HHHHHHSC
T ss_pred HHhcCCCCCCCEEEEECCEEccCCCHHHH--HHHHHhCC
Confidence 35677889999999999999999999998 67776543
No 204
>4amh_A Disks large homolog 1; permutation, protein folding, structural protein; 2.30A {Homo sapiens}
Probab=21.15 E-value=43 Score=30.11 Aligned_cols=37 Identities=11% Similarity=0.051 Sum_probs=25.5
Q ss_pred CCC-CCCCCceeccCCccCccCCCCCCchhhhcccCCCCc
Q psy6070 1241 SPN-ATNSNQALTNLTDSVSNTNQESPTSTELAKTSSGGF 1279 (1454)
Q Consensus 1241 SPS-sTqGDRLLeVNGEDVSNASQEEpSSVqLLKkSSgSV 1279 (1454)
... +..||+|+.+|+..+...++.+. ..+++..+..+
T Consensus 47 ~aG~L~~GD~Il~Vng~~v~~~~~~~~--~~~l~~~~~~v 84 (106)
T 4amh_A 47 KDGKLQIGDKLLAVNNVALEEVTHEEA--VTALKNTSDFV 84 (106)
T ss_dssp HHCCCCTTCEEEEETTEECSSCCHHHH--HHHHHSCCSEE
T ss_pred HCCCCCCCCEEEEECCEECCCCCHHHH--HHHHhCCCCeE
Confidence 344 88999999999999987766655 34444444333
Done!