BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6071
(185 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9CWN7|CB029_MOUSE UPF0760 protein C2orf29 homolog OS=Mus musculus GN=D1Bwg0212e PE=2
SV=1
Length = 505
Score = 200 bits (508), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 101/179 (56%), Positives = 128/179 (71%), Gaps = 15/179 (8%)
Query: 2 SHSNFNEQTAYKVAEELLTKTSGPGQLNHSSPLVNQYYKPEFLRLVPPLH-----LIWLN 56
S+S F+ A ++ E L+ SGP P + +++PEF+R PPLH L WLN
Sbjct: 247 SNSGFDSSVASRITESLV---SGP------KPPIESHFRPEFIRPPPPLHICEDELAWLN 297
Query: 57 LVDPSEHKIAYDSTMCVSNSAGVEAKKLMTRAFKSALTLQQQQHLLAELQHDSKLVYHIG 116
+P EH I +D +MCV NS GVE K++M +AFKS L+ QQ LL EL+ D KLVYHIG
Sbjct: 298 PTEP-EHAIQWDRSMCVKNSTGVEIKRIMAKAFKSPLSSPQQTQLLGELEKDPKLVYHIG 356
Query: 117 LTPAKLPDLVENNPLIAIEVLLKLIQSNHITEYFSVLVNMEMSLHSMEVVNSVLVNMEM 175
LTPAKLPDLVENNPL+AIE+LLKL+QS+ ITEYFSVLVNM+MSLHSMEVVN + +++
Sbjct: 357 LTPAKLPDLVENNPLVAIEMLLKLMQSSQITEYFSVLVNMDMSLHSMEVVNRLTTAVDL 415
>sp|B0BNA9|CB029_RAT UPF0760 protein C2orf29 homolog OS=Rattus norvegicus PE=2 SV=1
Length = 504
Score = 199 bits (506), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 101/179 (56%), Positives = 128/179 (71%), Gaps = 15/179 (8%)
Query: 2 SHSNFNEQTAYKVAEELLTKTSGPGQLNHSSPLVNQYYKPEFLRLVPPLH-----LIWLN 56
S+S F+ A ++ E L+ SGP P + +++PEF+R PPLH L WLN
Sbjct: 246 SNSAFDSSVASRITESLV---SGP------KPPIESHFRPEFIRPPPPLHICEDELAWLN 296
Query: 57 LVDPSEHKIAYDSTMCVSNSAGVEAKKLMTRAFKSALTLQQQQHLLAELQHDSKLVYHIG 116
+P EH I +D +MCV NS GVE K++M +AFKS L+ QQ LL EL+ D KLVYHIG
Sbjct: 297 PTEP-EHAIQWDRSMCVKNSTGVEIKRIMAKAFKSPLSSPQQTQLLGELEKDPKLVYHIG 355
Query: 117 LTPAKLPDLVENNPLIAIEVLLKLIQSNHITEYFSVLVNMEMSLHSMEVVNSVLVNMEM 175
LTPAKLPDLVENNPL+AIE+LLKL+QS+ ITEYFSVLVNM+MSLHSMEVVN + +++
Sbjct: 356 LTPAKLPDLVENNPLVAIEMLLKLMQSSQITEYFSVLVNMDMSLHSMEVVNRLTTAVDL 414
>sp|Q9UKZ1|CB029_HUMAN UPF0760 protein C2orf29 OS=Homo sapiens GN=C2orf29 PE=1 SV=1
Length = 510
Score = 198 bits (503), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 100/179 (55%), Positives = 128/179 (71%), Gaps = 15/179 (8%)
Query: 2 SHSNFNEQTAYKVAEELLTKTSGPGQLNHSSPLVNQYYKPEFLRLVPPLH-----LIWLN 56
S+S F+ A ++ E L+ SGP P + +++PEF+R PPLH L WLN
Sbjct: 252 SNSGFDSSVASQITEALV---SGP------KPPIESHFRPEFIRPPPPLHICEDELAWLN 302
Query: 57 LVDPSEHKIAYDSTMCVSNSAGVEAKKLMTRAFKSALTLQQQQHLLAELQHDSKLVYHIG 116
+P +H I +D +MCV NS GVE K++M +AFKS L+ QQ LL EL+ D KLVYHIG
Sbjct: 303 PTEP-DHAIQWDKSMCVKNSTGVEIKRIMAKAFKSPLSSPQQTQLLGELEKDPKLVYHIG 361
Query: 117 LTPAKLPDLVENNPLIAIEVLLKLIQSNHITEYFSVLVNMEMSLHSMEVVNSVLVNMEM 175
LTPAKLPDLVENNPL+AIE+LLKL+QS+ ITEYFSVLVNM+MSLHSMEVVN + +++
Sbjct: 362 LTPAKLPDLVENNPLVAIEMLLKLMQSSQITEYFSVLVNMDMSLHSMEVVNRLTTAVDL 420
>sp|A4QP78|CB029_DANRE UPF0760 protein C2orf29 homolog OS=Danio rerio GN=zgc:163002 PE=2
SV=1
Length = 445
Score = 192 bits (489), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 97/179 (54%), Positives = 126/179 (70%), Gaps = 15/179 (8%)
Query: 2 SHSNFNEQTAYKVAEELLTKTSGPGQLNHSSPLVNQYYKPEFLRLVPPL-----HLIWLN 56
S+S F+ A ++ E L+T GP P + +++PEF+R PPL L WLN
Sbjct: 187 SNSGFDSSVANQITESLVT---GP------RPPLESHFRPEFIRPTPPLLVCEDELCWLN 237
Query: 57 LVDPSEHKIAYDSTMCVSNSAGVEAKKLMTRAFKSALTLQQQQHLLAELQHDSKLVYHIG 116
+P EH++ +D +MCV N GVE K++M +AFKS L+ QQ LL EL+ D KLVYHIG
Sbjct: 238 PCEP-EHRVQWDRSMCVRNGTGVEIKRIMAKAFKSPLSAAQQTQLLGELEKDLKLVYHIG 296
Query: 117 LTPAKLPDLVENNPLIAIEVLLKLIQSNHITEYFSVLVNMEMSLHSMEVVNSVLVNMEM 175
LTPAKLPDLVENNPL+AIE+LLKL+ S+ ITEYFSVLVNM+MSLHSMEVVN + +++
Sbjct: 297 LTPAKLPDLVENNPLVAIEMLLKLMSSSQITEYFSVLVNMDMSLHSMEVVNRLTTAVDL 355
>sp|Q1ZXI2|CB029_DICDI UPF0760 protein DDB_G0279005 OS=Dictyostelium discoideum
GN=DDB_G0279005 PE=3 SV=1
Length = 642
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 62/105 (59%), Gaps = 1/105 (0%)
Query: 65 IAYDSTMCVSNSAGVEAKKLMTRAFKSALTLQQQQHLLAELQHDSKLVYHIGLTPAKLPD 124
I +T NS + + LMT+A K L Q + E+ D KL Y+ GLTP LP
Sbjct: 404 IPSPTTTTSYNSKKI-VRDLMTKAIKGRLKKSQILQIKNEMDIDPKLAYYSGLTPKNLPF 462
Query: 125 LVENNPLIAIEVLLKLIQSNHITEYFSVLVNMEMSLHSMEVVNSV 169
LVENN +AI+ LLKLI S ++F L++MEM+ SMEVVN++
Sbjct: 463 LVENNTQVAIDTLLKLINSPDFKDHFQTLISMEMNFRSMEVVNAL 507
>sp|Q82EC8|PANC_STRAW Pantothenate synthetase OS=Streptomyces avermitilis (strain ATCC
31267 / DSM 46492 / JCM 5070 / NCIMB 12804 / NRRL 8165 /
MA-4680) GN=panC PE=3 SV=1
Length = 333
Score = 34.3 bits (77), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 25/41 (60%), Gaps = 4/41 (9%)
Query: 22 TSGPGQLNHSSPLVNQYYKPEFLRLVPPLHLIWLNLVDPSE 62
TSGP + ++ LV + E RL PPL L +L LVDPS+
Sbjct: 260 TSGPAAVRCAARLVLE----EAARLQPPLVLDYLGLVDPSD 296
>sp|Q2UGN1|CYM1_ASPOR Mitochondrial presequence protease OS=Aspergillus oryzae (strain
ATCC 42149 / RIB 40) GN=cym1 PE=3 SV=1
Length = 1025
Score = 33.5 bits (75), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 56/115 (48%), Gaps = 27/115 (23%)
Query: 55 LNLVDPSEHKIAYDSTMCVSNSAGVEAKKLMTRAFKSALTLQQQQHLLAELQHDSKLVYH 114
L+ V S H+ A ++ +AG ++R+F +Q+QQ LA+LQ + L+
Sbjct: 707 LDSVAASGHRFALNAA-----AAG------LSRSF----WVQEQQSGLAQLQATANLLRD 751
Query: 115 IGLTPAKLPDLVENNPLIAIEVLLKLIQSNHITEYFSVLVNM---EMSLHSMEVV 166
+P +L +L+E L+LIQS I++ S+ V M S H EVV
Sbjct: 752 AETSPERLAELIEK---------LRLIQSFAISKSSSLRVRMVCEPSSAHQNEVV 797
>sp|O31066|KATG_CAUCR Catalase-peroxidase OS=Caulobacter crescentus (strain ATCC 19089 /
CB15) GN=katG PE=3 SV=3
Length = 727
Score = 31.6 bits (70), Expect = 3.1, Method: Composition-based stats.
Identities = 30/110 (27%), Positives = 46/110 (41%), Gaps = 16/110 (14%)
Query: 35 VNQYYKPEFLRLVPPLHLIWLNLVDPSEHKIAYDSTMCVSN----SAGVEAKKLMTRAFK 90
+ +Y P LVP LIW + + +H +A D + + G+ A L++ A+
Sbjct: 410 IGRYLGP----LVPKEELIWQDPIPAVDHPLADDKDIAALKAKILATGLSASDLVSTAWA 465
Query: 91 SALTLQQQQHLLAELQHDSKLVYHIGLTPAKLPDLVENNPLIAIEVLLKL 140
SA T +Q + I L P K D NNP + +VL L
Sbjct: 466 SASTYRQSD------KRGGANGARIRLAPQK--DWAVNNPPVLAKVLAAL 507
>sp|Q2J2I9|KATG_RHOP2 Catalase-peroxidase OS=Rhodopseudomonas palustris (strain HaA2)
GN=katG PE=3 SV=1
Length = 732
Score = 31.2 bits (69), Expect = 3.6, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Query: 45 RLVPPLHLIWLNLVDPSEHKIAYDSTMCVSNS----AGVEAKKLMTRAFKSALTLQQ 97
+LVP LIW + + P +H++ D + + +G+ +L++ AF SA T +
Sbjct: 418 KLVPKEDLIWQDPIPPVDHELVGDKDIAALKAKILGSGLSVSQLVSAAFASASTYRH 474
>sp|B4J340|PTER_DROGR Phosphotriesterase-related protein OS=Drosophila grimshawi
GN=GH16075 PE=3 SV=1
Length = 350
Score = 30.4 bits (67), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Query: 107 HDSKLVYHIGLTPAKLPDLVENNPLIAIEVLLKLIQSNHITEYFSVLVNMEMSLHSMEVV 166
H ++ H LT ++ DL + L IEV ++++S I E SV E HS+
Sbjct: 128 HATQDASHKNLTVEQMTDLYSKDILTGIEVNGRMVKSGFIGEVASVYPVQEFERHSLLAA 187
Query: 167 NSV--LVNMEMSLHSMEV 182
+ ++ +SLH V
Sbjct: 188 GEIQEVLGCGVSLHPHRV 205
>sp|Q8DT75|ADDB_STRMU ATP-dependent helicase/deoxyribonuclease subunit B OS=Streptococcus
mutans serotype c (strain ATCC 700610 / UA159) GN=rexB
PE=3 SV=1
Length = 1080
Score = 30.4 bits (67), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 26/48 (54%)
Query: 107 HDSKLVYHIGLTPAKLPDLVENNPLIAIEVLLKLIQSNHITEYFSVLV 154
H +K V+ +G+T + P +V+N LI+ E K+ ++ F ++
Sbjct: 557 HSNKFVFALGMTQSHFPKIVQNKSLISDEERAKINEATPDNRRFDIVT 604
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.129 0.362
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,746,783
Number of Sequences: 539616
Number of extensions: 2363337
Number of successful extensions: 5600
Number of sequences better than 100.0: 24
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 5581
Number of HSP's gapped (non-prelim): 30
length of query: 185
length of database: 191,569,459
effective HSP length: 110
effective length of query: 75
effective length of database: 132,211,699
effective search space: 9915877425
effective search space used: 9915877425
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)