Your job contains 1 sequence.
>psy6071
MSHSNFNEQTAYKVAEELLTKTSGPGQLNHSSPLVNQYYKPEFLRLVPPLHLIWLNLVDP
SEHKIAYDSTMCVSNSAGVEAKKLMTRAFKSALTLQQQQHLLAELQHDSKLVYHIGLTPA
KLPDLVENNPLIAIEVLLKLIQSNHITEYFSVLVNMEMSLHSMEVVNSVLVNMEMSLHSM
EVVNR
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy6071
(185 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
MGI|MGI:106580 - symbol:Cnot11 "CCR4-NOT transcription co... 440 1.7e-41 1
RGD|1560909 - symbol:Cnot11 "CCR4-NOT transcription compl... 438 2.8e-41 1
UNIPROTKB|Q9UKZ1 - symbol:CNOT11 "CCR4-NOT transcription ... 436 4.6e-41 1
TAIR|locus:2146208 - symbol:AT5G18420 "AT5G18420" species... 268 6.9e-23 1
DICTYBASE|DDB_G0279005 - symbol:DDB_G0279005 "unknown" sp... 187 1.3e-13 1
>MGI|MGI:106580 [details] [associations]
symbol:Cnot11 "CCR4-NOT transcription complex, subunit 11"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0030014 "CCR4-NOT complex" evidence=ISO] MGI:MGI:106580
eggNOG:NOG237228 InterPro:IPR019312 PANTHER:PTHR15975 Pfam:PF10155
HOGENOM:HOG000264251 HOVERGEN:HBG080995 OMA:QWDRSMC
OrthoDB:EOG4PK27X EMBL:AK010503 EMBL:AK144692 EMBL:AK167440
EMBL:BC049091 EMBL:BC050812 IPI:IPI00109313 RefSeq:NP_082319.1
UniGene:Mm.259421 UniGene:Mm.490693 PhosphoSite:Q9CWN7 PaxDb:Q9CWN7
PRIDE:Q9CWN7 Ensembl:ENSMUST00000003219 Ensembl:ENSMUST00000161515
GeneID:52846 KEGG:mmu:52846 UCSC:uc007ati.1 CTD:52846
GeneTree:ENSGT00390000006356 InParanoid:Q9CWN7 NextBio:309623
Bgee:Q9CWN7 Genevestigator:Q9CWN7 GermOnline:ENSMUSG00000003135
Uniprot:Q9CWN7
Length = 505
Score = 440 (159.9 bits), Expect = 1.7e-41, P = 1.7e-41
Identities = 94/179 (52%), Positives = 119/179 (66%)
Query: 2 SHSNFNEQTAYKVAEELLTKTSGPGQLNHSSPLVNQYYKPEFLRLVPPLH-----LIWLN 56
S+S F+ A ++ E L+ SGP P + +++PEF+R PPLH L WLN
Sbjct: 247 SNSGFDSSVASRITESLV---SGP------KPPIESHFRPEFIRPPPPLHICEDELAWLN 297
Query: 57 LVDPSEHKIAYDSTMCVSNSAGVEAKKLMTRAFKSXXXXXXXXXXXXXXXXDSKLVYHIG 116
+P EH I +D +MCV NS GVE K++M +AFKS D KLVYHIG
Sbjct: 298 PTEP-EHAIQWDRSMCVKNSTGVEIKRIMAKAFKSPLSSPQQTQLLGELEKDPKLVYHIG 356
Query: 117 LTPAKLPDLVENNPLIAIEVLLKLIQSNHITEYFSVLVNMEMSLHSMEVVNSVLVNMEM 175
LTPAKLPDLVENNPL+AIE+LLKL+QS+ ITEYFSVLVNM+MSLHSMEVVN + +++
Sbjct: 357 LTPAKLPDLVENNPLVAIEMLLKLMQSSQITEYFSVLVNMDMSLHSMEVVNRLTTAVDL 415
>RGD|1560909 [details] [associations]
symbol:Cnot11 "CCR4-NOT transcription complex, subunit 11"
species:10116 "Rattus norvegicus" [GO:0030014 "CCR4-NOT complex"
evidence=ISO] RGD:1560909 eggNOG:NOG237228 InterPro:IPR019312
PANTHER:PTHR15975 Pfam:PF10155 HOGENOM:HOG000264251
HOVERGEN:HBG080995 OMA:QWDRSMC OrthoDB:EOG4PK27X
GeneTree:ENSGT00390000006356 EMBL:CH473965 EMBL:BC158750
IPI:IPI00366941 RefSeq:NP_001102264.1 UniGene:Rn.22860
STRING:B0BNA9 PRIDE:B0BNA9 Ensembl:ENSRNOT00000031352 GeneID:363221
KEGG:rno:363221 UCSC:RGD:1560909 CTD:363221 NextBio:682882
Genevestigator:B0BNA9 Uniprot:B0BNA9
Length = 504
Score = 438 (159.2 bits), Expect = 2.8e-41, P = 2.8e-41
Identities = 94/179 (52%), Positives = 119/179 (66%)
Query: 2 SHSNFNEQTAYKVAEELLTKTSGPGQLNHSSPLVNQYYKPEFLRLVPPLH-----LIWLN 56
S+S F+ A ++ E L+ SGP P + +++PEF+R PPLH L WLN
Sbjct: 246 SNSAFDSSVASRITESLV---SGP------KPPIESHFRPEFIRPPPPLHICEDELAWLN 296
Query: 57 LVDPSEHKIAYDSTMCVSNSAGVEAKKLMTRAFKSXXXXXXXXXXXXXXXXDSKLVYHIG 116
+P EH I +D +MCV NS GVE K++M +AFKS D KLVYHIG
Sbjct: 297 PTEP-EHAIQWDRSMCVKNSTGVEIKRIMAKAFKSPLSSPQQTQLLGELEKDPKLVYHIG 355
Query: 117 LTPAKLPDLVENNPLIAIEVLLKLIQSNHITEYFSVLVNMEMSLHSMEVVNSVLVNMEM 175
LTPAKLPDLVENNPL+AIE+LLKL+QS+ ITEYFSVLVNM+MSLHSMEVVN + +++
Sbjct: 356 LTPAKLPDLVENNPLVAIEMLLKLMQSSQITEYFSVLVNMDMSLHSMEVVNRLTTAVDL 414
>UNIPROTKB|Q9UKZ1 [details] [associations]
symbol:CNOT11 "CCR4-NOT transcription complex subunit 11"
species:9606 "Homo sapiens" [GO:0008283 "cell proliferation"
evidence=NAS] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0030014 "CCR4-NOT
complex" evidence=IDA] [GO:0000288 "nuclear-transcribed mRNA
catabolic process, deadenylation-dependent decay" evidence=TAS]
[GO:0000289 "nuclear-transcribed mRNA poly(A) tail shortening"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] Reactome:REACT_71
Reactome:REACT_21257 GO:GO:0005829 GO:GO:0008283 GO:GO:0000289
eggNOG:NOG237228 InterPro:IPR019312 PANTHER:PTHR15975 Pfam:PF10155
EMBL:AF103798 EMBL:AC013722 EMBL:BC018664 EMBL:BC064421
IPI:IPI00014194 RefSeq:NP_060016.3 UniGene:Hs.593973
ProteinModelPortal:Q9UKZ1 IntAct:Q9UKZ1 STRING:Q9UKZ1
PhosphoSite:Q9UKZ1 DMDM:71152358 PaxDb:Q9UKZ1 PeptideAtlas:Q9UKZ1
PRIDE:Q9UKZ1 Ensembl:ENST00000289382 GeneID:55571 KEGG:hsa:55571
UCSC:uc002taw.4 CTD:55571 GeneCards:GC02P101869 H-InvDB:HIX0002326
HGNC:HGNC:25217 neXtProt:NX_Q9UKZ1 PharmGKB:PA134899354
HOGENOM:HOG000264251 HOVERGEN:HBG080995 InParanoid:Q9UKZ1
OMA:QWDRSMC OrthoDB:EOG4PK27X PhylomeDB:Q9UKZ1 ChiTaRS:C2orf29
GenomeRNAi:55571 NextBio:60062 ArrayExpress:Q9UKZ1 Bgee:Q9UKZ1
CleanEx:HS_C2orf29 Genevestigator:Q9UKZ1 GermOnline:ENSG00000158435
Uniprot:Q9UKZ1
Length = 510
Score = 436 (158.5 bits), Expect = 4.6e-41, P = 4.6e-41
Identities = 93/179 (51%), Positives = 119/179 (66%)
Query: 2 SHSNFNEQTAYKVAEELLTKTSGPGQLNHSSPLVNQYYKPEFLRLVPPLH-----LIWLN 56
S+S F+ A ++ E L+ SGP P + +++PEF+R PPLH L WLN
Sbjct: 252 SNSGFDSSVASQITEALV---SGP------KPPIESHFRPEFIRPPPPLHICEDELAWLN 302
Query: 57 LVDPSEHKIAYDSTMCVSNSAGVEAKKLMTRAFKSXXXXXXXXXXXXXXXXDSKLVYHIG 116
+P +H I +D +MCV NS GVE K++M +AFKS D KLVYHIG
Sbjct: 303 PTEP-DHAIQWDKSMCVKNSTGVEIKRIMAKAFKSPLSSPQQTQLLGELEKDPKLVYHIG 361
Query: 117 LTPAKLPDLVENNPLIAIEVLLKLIQSNHITEYFSVLVNMEMSLHSMEVVNSVLVNMEM 175
LTPAKLPDLVENNPL+AIE+LLKL+QS+ ITEYFSVLVNM+MSLHSMEVVN + +++
Sbjct: 362 LTPAKLPDLVENNPLVAIEMLLKLMQSSQITEYFSVLVNMDMSLHSMEVVNRLTTAVDL 420
>TAIR|locus:2146208 [details] [associations]
symbol:AT5G18420 "AT5G18420" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0009644 "response to high light intensity" evidence=RCA]
[GO:0010388 "cullin deneddylation" evidence=RCA] [GO:0042542
"response to hydrogen peroxide" evidence=RCA] EMBL:CP002688
GenomeReviews:BA000015_GR InterPro:IPR019312 PANTHER:PTHR15975
Pfam:PF10155 EMBL:BT033121 IPI:IPI00535931 RefSeq:NP_850845.1
UniGene:At.31427 PRIDE:B4F7N8 EnsemblPlants:AT5G18420.2
GeneID:831960 KEGG:ath:AT5G18420 TAIR:At5g18420 OMA:LNPDNNH
PhylomeDB:B4F7N8 Genevestigator:Q3E9F1 Uniprot:B4F7N8
Length = 442
Score = 268 (99.4 bits), Expect = 6.9e-23, P = 6.9e-23
Identities = 55/139 (39%), Positives = 79/139 (56%)
Query: 41 PEFLRLVPP---LHLIWLNLVDP-SEHKIAYDSTMCVSNSAGVEAKKLMTRAFKSXXXXX 96
P ++R PP +H L +DP ++H++ +D MC S+G + L+ + K
Sbjct: 223 PRWIRPCPPRYPVHQSELLWIDPDNKHELVWDDKMCADTSSGATVRDLLVKGLKVTLSPT 282
Query: 97 XXXXXXXXXXXDSKLVYHIGLTPAKLPDLVENNPLIAIEVLLKLIQSNHITEYFSVLVNM 156
D KLV+H G+TP KLP LVE+NP IA+E+L KL S I +Y+ L NM
Sbjct: 283 EQEDIITELANDPKLVFHCGITPRKLPQLVEHNPQIAVEILTKLNNSTEINDYYEALGNM 342
Query: 157 EMSLHSMEVVNSVLVNMEM 175
+MSLHSMEVVN + +E+
Sbjct: 343 DMSLHSMEVVNRLTTAVEL 361
>DICTYBASE|DDB_G0279005 [details] [associations]
symbol:DDB_G0279005 "unknown" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND]
dictyBase:DDB_G0279005 EMBL:AAFI02000026 RefSeq:XP_001134571.1
EnsemblProtists:DDB0232148 GeneID:8621826 KEGG:ddi:DDB_G0279005
eggNOG:NOG237228 InParanoid:Q1ZXI2 OMA:KNFYLER InterPro:IPR019312
PANTHER:PTHR15975 Pfam:PF10155 Uniprot:Q1ZXI2
Length = 642
Score = 187 (70.9 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 46/119 (38%), Positives = 63/119 (52%)
Query: 60 PSEHKIAYDSTMCVSNSAGVEAKKLMTRAFKSXXXXXXXXXXXXXXXXDSKLVYHIGLTP 119
P+ I +T NS + + LMT+A K D KL Y+ GLTP
Sbjct: 399 PTTILIPSPTTTTSYNSKKI-VRDLMTKAIKGRLKKSQILQIKNEMDIDPKLAYYSGLTP 457
Query: 120 AKLPDLVENNPLIAIEVLLKLIQSNHITEYFSVLVNMEMSLHSMEVVNSVLVNMEMSLH 178
LP LVENN +AI+ LLKLI S ++F L++MEM+ SMEVVN+ L +++ H
Sbjct: 458 KNLPFLVENNTQVAIDTLLKLINSPDFKDHFQTLISMEMNFRSMEVVNA-LATVDLPPH 515
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.130 0.365 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 185 169 0.00082 108 3 11 22 0.41 32
31 0.47 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 5
No. of states in DFA: 575 (61 KB)
Total size of DFA: 140 KB (2087 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 14.37u 0.11s 14.48t Elapsed: 00:00:02
Total cpu time: 14.37u 0.11s 14.48t Elapsed: 00:00:02
Start: Thu Aug 15 11:22:07 2013 End: Thu Aug 15 11:22:09 2013