BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6080
(240 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5R7L3|RM16_PONAB 39S ribosomal protein L16, mitochondrial OS=Pongo abelii GN=MRPL16
PE=2 SV=1
Length = 251
Score = 187 bits (476), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 87/222 (39%), Positives = 139/222 (62%), Gaps = 4/222 (1%)
Query: 19 CTAGLKNIKKPPNYDHIVMPERPRLKFVDKVPTFIYNHKTPRTTKRLDLLRGPEEIHNYL 78
+AG+K + P+++ + +PE+P+L+F+++ P K R K L +RGP
Sbjct: 26 ASAGVKTLLPVPSFEDVSIPEKPKLRFIERAPLV---PKVRREPKNLSDIRGPSTEATEF 82
Query: 79 IHKQYGLVALSGGRMNYRHFETIRFAMMRKLDVKKMFAVWRVDPPWLPVTKKGLGSRMGG 138
+ ++AL GG +++ HFE +R + R +D K MFA+WRV P+ P+T+K +G RMGG
Sbjct: 83 TEGNFAILALGGGYLHWGHFEMMRLTINRSMDPKNMFAIWRVPAPFKPITRKSVGHRMGG 142
Query: 139 GKGSIDHYVTPVKTGRIIIEVGGKCSYEEVLPYLRSCASKMPFKCMPCNEDILREMKEKE 198
GKG+IDHYVTPVK GR+++E+GG+C +EEV +L A K+PF + L +M++ +
Sbjct: 143 GKGAIDHYVTPVKAGRLVVEMGGRCEFEEVQGFLDQVAHKLPFAAKAVSRGTLEKMRKDQ 202
Query: 199 EREARDNINPYTFEYMIKNNIGNCRQWISTHVDYKYFGKYFG 240
E R+N NP+TFE + N+ R+ +S + D + GKY+G
Sbjct: 203 EERERNNQNPWTFERIATANMLGIRKVLSPY-DLTHKGKYWG 243
>sp|Q9NX20|RM16_HUMAN 39S ribosomal protein L16, mitochondrial OS=Homo sapiens GN=MRPL16
PE=1 SV=1
Length = 251
Score = 187 bits (476), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 87/222 (39%), Positives = 139/222 (62%), Gaps = 4/222 (1%)
Query: 19 CTAGLKNIKKPPNYDHIVMPERPRLKFVDKVPTFIYNHKTPRTTKRLDLLRGPEEIHNYL 78
+AG+K + P+++ + +PE+P+L+F+++ P K R K L +RGP
Sbjct: 26 ASAGVKTLLPVPSFEDVSIPEKPKLRFIERAPLV---PKVRREPKNLSDIRGPSTEATEF 82
Query: 79 IHKQYGLVALSGGRMNYRHFETIRFAMMRKLDVKKMFAVWRVDPPWLPVTKKGLGSRMGG 138
+ ++AL GG +++ HFE +R + R +D K MFA+WRV P+ P+T+K +G RMGG
Sbjct: 83 TEGNFAILALGGGYLHWGHFEMMRLTINRSMDPKNMFAIWRVPAPFKPITRKSVGHRMGG 142
Query: 139 GKGSIDHYVTPVKTGRIIIEVGGKCSYEEVLPYLRSCASKMPFKCMPCNEDILREMKEKE 198
GKG+IDHYVTPVK GR+++E+GG+C +EEV +L A K+PF + L +M++ +
Sbjct: 143 GKGAIDHYVTPVKAGRLVVEMGGRCEFEEVQGFLDQVAHKLPFAAKAVSRGTLEKMRKDQ 202
Query: 199 EREARDNINPYTFEYMIKNNIGNCRQWISTHVDYKYFGKYFG 240
E R+N NP+TFE + N+ R+ +S + D + GKY+G
Sbjct: 203 EERERNNQNPWTFERIATANMLGIRKVLSPY-DLTHKGKYWG 243
>sp|Q3T0J3|RM16_BOVIN 39S ribosomal protein L16, mitochondrial OS=Bos taurus GN=MRPL16
PE=1 SV=1
Length = 251
Score = 183 bits (464), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 88/222 (39%), Positives = 137/222 (61%), Gaps = 4/222 (1%)
Query: 19 CTAGLKNIKKPPNYDHIVMPERPRLKFVDKVPTFIYNHKTPRTTKRLDLLRGPEEIHNYL 78
AGLK + P ++ + +PE+P+L+FV++ P K R K L +RGP
Sbjct: 26 ARAGLKTLLPVPTFEDVSIPEKPKLRFVERAPLV---PKVRREPKNLRDIRGPSTEATEF 82
Query: 79 IHKQYGLVALSGGRMNYRHFETIRFAMMRKLDVKKMFAVWRVDPPWLPVTKKGLGSRMGG 138
+ ++AL GG +++ HFE +R + R +D K MFA+WRV P+ +T+KG+G RMGG
Sbjct: 83 TEGNFAILALGGGYLHWGHFEMMRLTINRFMDPKNMFALWRVPAPFKAITRKGMGQRMGG 142
Query: 139 GKGSIDHYVTPVKTGRIIIEVGGKCSYEEVLPYLRSCASKMPFKCMPCNEDILREMKEKE 198
GKG+IDHYVTPVK GR+I+EVGG+C ++EV L A K+PF + + L ++++ +
Sbjct: 143 GKGAIDHYVTPVKAGRLIVEVGGRCEFQEVQGILNQVAHKLPFPAKAVSRETLEKIQKDQ 202
Query: 199 EREARDNINPYTFEYMIKNNIGNCRQWISTHVDYKYFGKYFG 240
E R+N NP+TFE + N+ R+ +S + D + G+Y+G
Sbjct: 203 EERERNNQNPWTFERIATANMLGIRKVLSPY-DLTHRGRYWG 243
>sp|Q99N93|RM16_MOUSE 39S ribosomal protein L16, mitochondrial OS=Mus musculus GN=Mrpl16
PE=2 SV=1
Length = 251
Score = 181 bits (460), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 89/222 (40%), Positives = 136/222 (61%), Gaps = 4/222 (1%)
Query: 19 CTAGLKNIKKPPNYDHIVMPERPRLKFVDKVPTFIYNHKTPRTTKRLDLLRGPEEIHNYL 78
+AGLK + P ++++ +PER +LKFV++VP K R K L +RGP
Sbjct: 26 TSAGLKTLLPVPTFENVSIPERSKLKFVERVPLV---PKVRREPKNLKDIRGPSTEATDF 82
Query: 79 IHKQYGLVALSGGRMNYRHFETIRFAMMRKLDVKKMFAVWRVDPPWLPVTKKGLGSRMGG 138
+ ++AL GG +++ HFE +R + R +D K MFA+WRV P+ P+T+KG+G RMGG
Sbjct: 83 TEGNFAILALGGGYLHWGHFEMMRLTINRFMDPKNMFAIWRVPAPFKPITRKGVGQRMGG 142
Query: 139 GKGSIDHYVTPVKTGRIIIEVGGKCSYEEVLPYLRSCASKMPFKCMPCNEDILREMKEKE 198
GKG+IDHYVTPVKTG +++E+GG+C +EEV L A K+PF + L M + +
Sbjct: 143 GKGAIDHYVTPVKTGCLVVEMGGRCEFEEVKGILNQVAHKLPFPAKAVSRKTLERMHQNQ 202
Query: 199 EREARDNINPYTFEYMIKNNIGNCRQWISTHVDYKYFGKYFG 240
+N NP+TFE++ N+ R+++S + D G+Y+G
Sbjct: 203 RERELNNQNPWTFEHIATANMFGIRKFLSPY-DLTQKGRYWG 243
>sp|Q5M818|RM16_RAT 39S ribosomal protein L16, mitochondrial OS=Rattus norvegicus
GN=Mrpl16 PE=2 SV=1
Length = 251
Score = 181 bits (459), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 90/226 (39%), Positives = 138/226 (61%), Gaps = 4/226 (1%)
Query: 15 GQIVCTAGLKNIKKPPNYDHIVMPERPRLKFVDKVPTFIYNHKTPRTTKRLDLLRGPEEI 74
+ +AGLK + P ++++ +PER +LKFV++VP K R K L +RGP
Sbjct: 22 AALPTSAGLKTLLPVPTFENVSIPERSKLKFVERVPLV---PKVRREPKNLKDIRGPSAE 78
Query: 75 HNYLIHKQYGLVALSGGRMNYRHFETIRFAMMRKLDVKKMFAVWRVDPPWLPVTKKGLGS 134
+ ++AL GG +++ HFE +R + R +D K MFA+WRV P+ P+T+KG+G
Sbjct: 79 ATDFTEGNFAILALGGGYLHWGHFEMMRLTINRFMDPKNMFAIWRVPAPFKPITRKGVGQ 138
Query: 135 RMGGGKGSIDHYVTPVKTGRIIIEVGGKCSYEEVLPYLRSCASKMPFKCMPCNEDILREM 194
RMGGGKG+IDHYVTPVKTG +I+E+GG+C +EEV L A K+PF + L +M
Sbjct: 139 RMGGGKGAIDHYVTPVKTGCLIVEMGGRCEFEEVKRVLNQVAHKLPFPAKAVSRKTLEKM 198
Query: 195 KEKEEREARDNINPYTFEYMIKNNIGNCRQWISTHVDYKYFGKYFG 240
+ ++ +N NP+TFE + N+ R+++S + D G+Y+G
Sbjct: 199 HQNQKERELNNQNPWTFERIATANMFGIRKFLSPY-DLTQKGRYWG 243
>sp|B9LJD9|RL16_CHLSY 50S ribosomal protein L16 OS=Chloroflexus aurantiacus (strain ATCC
29364 / DSM 637 / Y-400-fl) GN=rplP PE=3 SV=1
Length = 151
Score = 72.8 bits (177), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 66/124 (53%), Gaps = 3/124 (2%)
Query: 76 NYLIHKQYGLVALSGGRMNYRHFETIRFAMMRKLDVKKMFAVWRVDPPWLPVTKKGLGSR 135
N ++ +YGL+AL ++ R E R A+ VK+ VW P PVT+K +R
Sbjct: 25 NNVVFGEYGLMALEPSWISSRQIEAARRAITNY--VKRGGKVWIRIFPDKPVTRKPAETR 82
Query: 136 MGGGKGSIDHYVTPVKTGRIIIEVGGKCSYEEVLPYLRSCASKMPFKCMPCNEDILREMK 195
MGGGKGS+DH+V VK GRI+ E+ G + LR A K+P KC + + M
Sbjct: 83 MGGGKGSVDHWVAVVKPGRIMFELAG-VREDVAHEALRRAAQKLPIKCKVIDREEQGTMA 141
Query: 196 EKEE 199
+ EE
Sbjct: 142 KPEE 145
>sp|A9WH73|RL16_CHLAA 50S ribosomal protein L16 OS=Chloroflexus aurantiacus (strain ATCC
29366 / DSM 635 / J-10-fl) GN=rplP PE=3 SV=1
Length = 151
Score = 72.8 bits (177), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 66/124 (53%), Gaps = 3/124 (2%)
Query: 76 NYLIHKQYGLVALSGGRMNYRHFETIRFAMMRKLDVKKMFAVWRVDPPWLPVTKKGLGSR 135
N ++ +YGL+AL ++ R E R A+ VK+ VW P PVT+K +R
Sbjct: 25 NNVVFGEYGLMALEPSWISSRQIEAARRAITNY--VKRGGKVWIRIFPDKPVTRKPAETR 82
Query: 136 MGGGKGSIDHYVTPVKTGRIIIEVGGKCSYEEVLPYLRSCASKMPFKCMPCNEDILREMK 195
MGGGKGS+DH+V VK GRI+ E+ G + LR A K+P KC + + M
Sbjct: 83 MGGGKGSVDHWVAVVKPGRIMFELAG-VREDVAHEALRRAAQKLPIKCKVIDREEQGTMA 141
Query: 196 EKEE 199
+ EE
Sbjct: 142 KPEE 145
>sp|A8ESV0|RL16_ARCB4 50S ribosomal protein L16 OS=Arcobacter butzleri (strain RM4018)
GN=rplP PE=3 SV=1
Length = 141
Score = 72.0 bits (175), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 63/126 (50%), Gaps = 3/126 (2%)
Query: 69 RGPEEIHNYLIHKQYGLVALSGGRMNYRHFETIRFAMMRKLDVKKMFAVWRVDPPWLPVT 128
RG N L + +G+ A+ GR++ R E R AM RK VK+ VW + P P+T
Sbjct: 18 RGMAHRGNSLAYGDFGIKAVEHGRIDSRQIEASRIAMTRK--VKRQAKVWIMVFPDKPLT 75
Query: 129 KKGLGSRMGGGKGSIDHYVTPVKTGRIIIEVGGKCSYEEVLPYLRSCASKMPFKCMPCNE 188
K L +RMG GKGS+D +V +K GRI E+ G E L K+PFK
Sbjct: 76 AKPLETRMGKGKGSVDKWVMNIKPGRICFEMAG-VGEELAREALALAMHKLPFKTKIVTR 134
Query: 189 DILREM 194
D E+
Sbjct: 135 DSENEL 140
>sp|B9L6M6|RL16_NAUPA 50S ribosomal protein L16 OS=Nautilia profundicola (strain ATCC
BAA-1463 / DSM 18972 / AmH) GN=rplP PE=3 SV=1
Length = 141
Score = 70.1 bits (170), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 62/115 (53%), Gaps = 3/115 (2%)
Query: 69 RGPEEIHNYLIHKQYGLVALSGGRMNYRHFETIRFAMMRKLDVKKMFAVWRVDPPWLPVT 128
RG + L YGL A+ GR+N R E R A+ R + K+ +W P P+T
Sbjct: 18 RGKAYRGSTLAFGTYGLKAVELGRINSRQIEAGRVALSRTM--KRTGKIWIRVFPDKPLT 75
Query: 129 KKGLGSRMGGGKGSIDHYVTPVKTGRIIIEVGGKCSYEEVLPYLRSCASKMPFKC 183
K +G RMG GKGS++ +V +K GRII E+ G + E + L A+K+PFK
Sbjct: 76 AKPVGVRMGKGKGSVEEWVMNIKPGRIIFEITG-VNNETAVRALTLAAAKLPFKT 129
>sp|B2V7K6|RL16_SULSY 50S ribosomal protein L16 OS=Sulfurihydrogenibium sp. (strain
YO3AOP1) GN=rplP PE=3 SV=1
Length = 138
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 54/108 (50%), Gaps = 3/108 (2%)
Query: 76 NYLIHKQYGLVALSGGRMNYRHFETIRFAMMRKLDVKKMFAVWRVDPPWLPVTKKGLGSR 135
N + +YGL AL GR+ R E R A++R + KK VW P PVTKK +R
Sbjct: 27 NQVDFGEYGLQALEPGRLTSRQIEAARIAIVR--EAKKGAKVWIRVFPHKPVTKKPAETR 84
Query: 136 MGGGKGSIDHYVTPVKTGRIIIEVGGKCSYEEVLPYLRSCASKMPFKC 183
MG GKG +DHY VK G I+ E+ G E R K+P K
Sbjct: 85 MGKGKGDLDHYEAIVKPGHILFELAG-VPEEVAAEAFRKAGHKLPIKT 131
>sp|Q0SN22|RL16_BORAP 50S ribosomal protein L16 OS=Borrelia afzelii (strain PKo) GN=rplP
PE=3 SV=1
Length = 138
Score = 69.3 bits (168), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 62/118 (52%), Gaps = 5/118 (4%)
Query: 68 LRGPEEIHNYLIHKQYGLVALSGGRMNYRHFETIRFAMMRKLDVKKMFAVWRVDPPWLPV 127
L G + N + +YGLV+L + R E R AM RK +K+ VW P +P
Sbjct: 17 LSGEAQKGNKISFGEYGLVSLETNFITARQIEAARIAMTRK--IKRGGRVWIRIFPDIPY 74
Query: 128 TKKGLGSRMGGGKGSIDHYVTPVKTGRIIIEVGGKCSYEEVLPYLRSCA-SKMPFKCM 184
TKK +RMG GKG +DH+ PVK G ++ E+ G EE+ S A SK+P K M
Sbjct: 75 TKKPAETRMGKGKGGVDHWNAPVKLGTVMFEMAGVV--EELAQEAMSLASSKLPVKTM 130
>sp|Q661D5|RL16_BORGA 50S ribosomal protein L16 OS=Borrelia garinii (strain PBi) GN=rplP
PE=3 SV=1
Length = 138
Score = 69.3 bits (168), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 62/118 (52%), Gaps = 5/118 (4%)
Query: 68 LRGPEEIHNYLIHKQYGLVALSGGRMNYRHFETIRFAMMRKLDVKKMFAVWRVDPPWLPV 127
L G + N + +YGLV+L + R E R AM RK +K+ VW P +P
Sbjct: 17 LSGEAQKGNKISFGEYGLVSLETSFITARQIEAARIAMTRK--IKRGGRVWIRIFPDIPY 74
Query: 128 TKKGLGSRMGGGKGSIDHYVTPVKTGRIIIEVGGKCSYEEVLPYLRSCA-SKMPFKCM 184
TKK +RMG GKG +DH+ PVK G ++ E+ G EE+ S A SK+P K M
Sbjct: 75 TKKPAETRMGKGKGGVDHWNAPVKLGTVMFEMAG--VIEELAQEAMSLASSKLPVKTM 130
>sp|B7J250|RL16_BORBZ 50S ribosomal protein L16 OS=Borrelia burgdorferi (strain ZS7)
GN=rplP PE=3 SV=1
Length = 138
Score = 69.3 bits (168), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 62/118 (52%), Gaps = 5/118 (4%)
Query: 68 LRGPEEIHNYLIHKQYGLVALSGGRMNYRHFETIRFAMMRKLDVKKMFAVWRVDPPWLPV 127
L G + N + +YGLV+L + R E R AM RK +K+ VW P +P
Sbjct: 17 LSGEAQKGNKISFGEYGLVSLETNFITARQIEAARIAMTRK--IKRGGRVWIRIFPDIPY 74
Query: 128 TKKGLGSRMGGGKGSIDHYVTPVKTGRIIIEVGGKCSYEEVLPYLRSCA-SKMPFKCM 184
TKK +RMG GKG +DH+ PVK G ++ E+ G EE+ S A SK+P K M
Sbjct: 75 TKKPAETRMGKGKGGVDHWNAPVKLGTVMFEMSGVV--EELAQEAMSLASSKLPVKTM 130
>sp|O51438|RL16_BORBU 50S ribosomal protein L16 OS=Borrelia burgdorferi (strain ATCC
35210 / B31 / CIP 102532 / DSM 4680) GN=rplP PE=3 SV=1
Length = 138
Score = 69.3 bits (168), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 62/118 (52%), Gaps = 5/118 (4%)
Query: 68 LRGPEEIHNYLIHKQYGLVALSGGRMNYRHFETIRFAMMRKLDVKKMFAVWRVDPPWLPV 127
L G + N + +YGLV+L + R E R AM RK +K+ VW P +P
Sbjct: 17 LSGEAQKGNKISFGEYGLVSLETNFITARQIEAARIAMTRK--IKRGGRVWIRIFPDIPY 74
Query: 128 TKKGLGSRMGGGKGSIDHYVTPVKTGRIIIEVGGKCSYEEVLPYLRSCA-SKMPFKCM 184
TKK +RMG GKG +DH+ PVK G ++ E+ G EE+ S A SK+P K M
Sbjct: 75 TKKPAETRMGKGKGGVDHWNAPVKLGTVMFEMSGVV--EELAQEAMSLASSKLPVKTM 130
>sp|B8G6R8|RL16_CHLAD 50S ribosomal protein L16 OS=Chloroflexus aggregans (strain MD-66 /
DSM 9485) GN=rplP PE=3 SV=1
Length = 151
Score = 69.3 bits (168), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 64/124 (51%), Gaps = 3/124 (2%)
Query: 76 NYLIHKQYGLVALSGGRMNYRHFETIRFAMMRKLDVKKMFAVWRVDPPWLPVTKKGLGSR 135
N + +YGL+AL ++ R E R A+ VK+ VW P P+T+K +R
Sbjct: 25 NSVAFGEYGLMALEPSWISSRQIEAARRAITNY--VKRGGKVWIRIFPDKPITRKPAETR 82
Query: 136 MGGGKGSIDHYVTPVKTGRIIIEVGGKCSYEEVLPYLRSCASKMPFKCMPCNEDILREMK 195
MGGGKGS+DH+V VK GRI+ E+ G + LR A K+P KC + + M
Sbjct: 83 MGGGKGSVDHWVAVVKPGRIMFELAG-VREDIAHEALRRAAQKLPVKCKVIDREEQGTMA 141
Query: 196 EKEE 199
+E
Sbjct: 142 TDQE 145
>sp|A8MLE7|RL16_ALKOO 50S ribosomal protein L16 OS=Alkaliphilus oremlandii (strain
OhILAs) GN=rplP PE=3 SV=1
Length = 147
Score = 68.9 bits (167), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 71/138 (51%), Gaps = 7/138 (5%)
Query: 68 LRGPEEIHNYLIHKQYGLVALSGGRMNYRHFETIRFAMMRKLDVKKMFAVWRVDPPWLPV 127
+RG N + + +YGL+A+ + E R AM R +K+ VW P PV
Sbjct: 17 MRGQAHKGNTISYGEYGLMAMEPAWITSNQIEAARIAMTRY--IKRGGKVWIKIFPHKPV 74
Query: 128 TKKGLGSRMGGGKGSIDHYVTPVKTGRIIIEVGGKCSYEEVLPYLRSCASKMPFKCMPCN 187
TKK +RMG GKGS +++V VK GR++ E+ G S E +R K+P KC
Sbjct: 75 TKKPAETRMGAGKGSPEYWVAVVKPGRVMFELSG-VSEERAREAMRLAMHKLPIKC---- 129
Query: 188 EDILREMKEKEEREARDN 205
+ + RE +E + EA +N
Sbjct: 130 KFVTREDQEVKGGEANEN 147
>sp|A5USI2|RL16_ROSS1 50S ribosomal protein L16 OS=Roseiflexus sp. (strain RS-1) GN=rplP
PE=3 SV=1
Length = 141
Score = 68.6 bits (166), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 57/115 (49%), Gaps = 3/115 (2%)
Query: 69 RGPEEIHNYLIHKQYGLVALSGGRMNYRHFETIRFAMMRKLDVKKMFAVWRVDPPWLPVT 128
RG N + +YGL+AL M R E R A+ VK+ +W P PVT
Sbjct: 18 RGMAHRGNTVAFGEYGLMALEATWMTSRQIEAARRAISH--HVKRGGKIWIRIFPDKPVT 75
Query: 129 KKGLGSRMGGGKGSIDHYVTPVKTGRIIIEVGGKCSYEEVLPYLRSCASKMPFKC 183
K +RMG GKG++DHYV +K GRI+ E+ G E L A K+P KC
Sbjct: 76 AKPAETRMGSGKGAVDHYVAVIKPGRILFELAG-VRPEVAHEALERAAQKLPIKC 129
>sp|Q31IX5|RL16_THICR 50S ribosomal protein L16 OS=Thiomicrospira crunogena (strain
XCL-2) GN=rplP PE=3 SV=1
Length = 137
Score = 68.2 bits (165), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 65/125 (52%), Gaps = 7/125 (5%)
Query: 69 RGPEEIHNYLIHKQYGLVALSGGRMNYRHFETIRFAMMRKLDVKKMFAVWRVDPPWLPVT 128
RG + N + ++GL A+ GRM R E R M RK VK+ +W P P+T
Sbjct: 18 RGLANVGNKISFGEFGLKAMERGRMTSRQIEAARRVMTRK--VKRGAKIWIRVFPDKPIT 75
Query: 129 KKGLGSRMGGGKGSIDHYVTPVKTGRIIIEVGGKCSYEEVLP--YLRSCASKMPFKCMPC 186
K L RMG GKGS++++V V+ GR++ E+ G +EV+ A+K+PFK
Sbjct: 76 NKPLEVRMGKGKGSVEYWVAQVQPGRVLYEMQG---VDEVVAREAFELAAAKLPFKTQFV 132
Query: 187 NEDIL 191
++
Sbjct: 133 TRTVM 137
>sp|Q2S3Q7|RL16_SALRD 50S ribosomal protein L16 OS=Salinibacter ruber (strain DSM 13855 /
M31) GN=rplP PE=3 SV=1
Length = 145
Score = 68.2 bits (165), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 51/101 (50%), Gaps = 2/101 (1%)
Query: 83 YGLVALSGGRMNYRHFETIRFAMMRKLDVKKMFAVWRVDPPWLPVTKKGLGSRMGGGKGS 142
YGL +L G +N R E R A+ R L K+ VW P P TK +RMG GKG
Sbjct: 35 YGLKSLEEGEVNSRQLEAARVAINRYL--KRDGKVWIRVFPDKPKTKTPAETRMGKGKGE 92
Query: 143 IDHYVTPVKTGRIIIEVGGKCSYEEVLPYLRSCASKMPFKC 183
+H+V PV+ G +I EVGG E LR K+P K
Sbjct: 93 PEHFVAPVQPGNVIFEVGGGADEESAREALRLGKHKLPLKT 133
>sp|A6Q1I5|RL16_NITSB 50S ribosomal protein L16 OS=Nitratiruptor sp. (strain SB155-2)
GN=rplP PE=3 SV=1
Length = 141
Score = 68.2 bits (165), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 65/128 (50%), Gaps = 7/128 (5%)
Query: 69 RGPEEIHNYLIHKQYGLVALSGGRMNYRHFETIRFAMMRKLDVKKMFAVWRVDPPWLPVT 128
RG N L G+ AL GR++ R E R AM RK VK+ +W P P+T
Sbjct: 18 RGKAYNGNSLAFGTIGIKALEHGRIDSRQIEAARVAMTRK--VKRTGKIWIRVFPDKPLT 75
Query: 129 KKGLGSRMGGGKGSIDHYVTPVKTGRIIIEVGGKCSYEEVLP--YLRSCASKMPFKCMPC 186
KK L +RMG GKGS++ +V +K GRII E+ G EE L L K+PFK
Sbjct: 76 KKPLETRMGKGKGSVEKWVMNIKPGRIIYEMAG---VEESLAREALDLARYKLPFKTKIV 132
Query: 187 NEDILREM 194
++ E+
Sbjct: 133 TQESENEI 140
>sp|A3DJH9|RL16_CLOTH 50S ribosomal protein L16 OS=Clostridium thermocellum (strain ATCC
27405 / DSM 1237) GN=rplP PE=3 SV=1
Length = 145
Score = 68.2 bits (165), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 59/116 (50%), Gaps = 3/116 (2%)
Query: 68 LRGPEEIHNYLIHKQYGLVALSGGRMNYRHFETIRFAMMRKLDVKKMFAVWRVDPPWLPV 127
++G N ++H YGL AL + E R AM R +K+ VW P PV
Sbjct: 17 MKGVATRGNKVVHGDYGLQALEPAWITSNQIEAARIAMTR--FIKRGGKVWIKIFPDKPV 74
Query: 128 TKKGLGSRMGGGKGSIDHYVTPVKTGRIIIEVGGKCSYEEVLPYLRSCASKMPFKC 183
TKK +RMG GKGS +++V VK GR++ E+ G S E LR K+P KC
Sbjct: 75 TKKPAETRMGSGKGSPEYWVAVVKPGRVLFEIAG-VSEEVAREALRLAMHKLPIKC 129
>sp|A9KJI7|RL16_CLOPH 50S ribosomal protein L16 OS=Clostridium phytofermentans (strain
ATCC 700394 / DSM 18823 / ISDg) GN=rplP PE=3 SV=1
Length = 145
Score = 67.8 bits (164), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 63/129 (48%), Gaps = 7/129 (5%)
Query: 59 PRTTKRLDLLRGPEEIH----NYLIHKQYGLVALSGGRMNYRHFETIRFAMMRKLDVKKM 114
P+ KR RG N + H +YG+VA+ + E R AM R +K+
Sbjct: 4 PKRVKRRKQFRGSMAGKAMRGNTISHGEYGIVAMESAWIKSNQIEAARIAMTRY--IKRG 61
Query: 115 FAVWRVDPPWLPVTKKGLGSRMGGGKGSIDHYVTPVKTGRIIIEVGGKCSYEEVLPYLRS 174
VW P PVT K +RMG GKGS++++V VK GR++ E+ G + E LR
Sbjct: 62 GKVWIKIFPDKPVTTKPAETRMGSGKGSLEYWVAVVKPGRVMFEIAG-VAEETAREALRL 120
Query: 175 CASKMPFKC 183
K+P KC
Sbjct: 121 ATHKLPVKC 129
>sp|A7NR56|RL16_ROSCS 50S ribosomal protein L16 OS=Roseiflexus castenholzii (strain DSM
13941 / HLO8) GN=rplP PE=3 SV=1
Length = 141
Score = 67.8 bits (164), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 61/123 (49%), Gaps = 4/123 (3%)
Query: 69 RGPEEIHNYLIHKQYGLVALSGGRMNYRHFETIRFAMMRKLDVKKMFAVWRVDPPWLPVT 128
RG N + +YGL+A+ M R E R A+ VK+ +W P PVT
Sbjct: 18 RGMAHRGNTVAFGEYGLMAIEATWMTSRQIEAARRAISH--HVKRGGKIWIRIFPDKPVT 75
Query: 129 KKGLGSRMGGGKGSIDHYVTPVKTGRIIIEVGGKCSYEEVLPYLRSCASKMPFKC-MPCN 187
K +RMG GKG++DHYV +K GRI+ E+ G E L A K+P KC +
Sbjct: 76 AKPAETRMGSGKGAVDHYVAVIKPGRILFELAG-VRPEIAHEALERAAQKLPIKCKIVAR 134
Query: 188 EDI 190
ED+
Sbjct: 135 EDL 137
>sp|B0SSH0|RL16_LEPBP 50S ribosomal protein L16 OS=Leptospira biflexa serovar Patoc
(strain Patoc 1 / ATCC 23582 / Paris) GN=rplP PE=3 SV=1
Length = 137
Score = 67.4 bits (163), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 66/124 (53%), Gaps = 3/124 (2%)
Query: 68 LRGPEEIHNYLIHKQYGLVALSGGRMNYRHFETIRFAMMRKLDVKKMFAVWRVDPPWLPV 127
L+G +E +Y+ ++GL A+S GR+ R E R + R+ VK+ +W P LP+
Sbjct: 17 LKGKDERGSYVAFGEFGLKAISSGRITARQIEAARITINRQ--VKRGGKLWIRIFPHLPI 74
Query: 128 TKKGLGSRMGGGKGSIDHYVTPVKTGRIIIEVGGKCSYEEVLPYLRSCASKMPFKCMPCN 187
TKK +RMG GKG+ + ++ ++ GR++ E+ G E L A K+P +
Sbjct: 75 TKKPAETRMGKGKGNPEFWIAEIRPGRVLFEMAG-VDEETARKALHLAAFKLPVETSFVK 133
Query: 188 EDIL 191
++L
Sbjct: 134 RNVL 137
>sp|B0SA40|RL16_LEPBA 50S ribosomal protein L16 OS=Leptospira biflexa serovar Patoc
(strain Patoc 1 / Ames) GN=rplP PE=3 SV=1
Length = 137
Score = 67.4 bits (163), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 66/124 (53%), Gaps = 3/124 (2%)
Query: 68 LRGPEEIHNYLIHKQYGLVALSGGRMNYRHFETIRFAMMRKLDVKKMFAVWRVDPPWLPV 127
L+G +E +Y+ ++GL A+S GR+ R E R + R+ VK+ +W P LP+
Sbjct: 17 LKGKDERGSYVAFGEFGLKAISSGRITARQIEAARITINRQ--VKRGGKLWIRIFPHLPI 74
Query: 128 TKKGLGSRMGGGKGSIDHYVTPVKTGRIIIEVGGKCSYEEVLPYLRSCASKMPFKCMPCN 187
TKK +RMG GKG+ + ++ ++ GR++ E+ G E L A K+P +
Sbjct: 75 TKKPAETRMGKGKGNPEFWIAEIRPGRVLFEMAG-VDEETARKALHLAAFKLPVETSFVK 133
Query: 188 EDIL 191
++L
Sbjct: 134 RNVL 137
>sp|B5RPI9|RL16_BORRA 50S ribosomal protein L16 OS=Borrelia recurrentis (strain A1)
GN=rplP PE=3 SV=1
Length = 138
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 59/116 (50%), Gaps = 3/116 (2%)
Query: 68 LRGPEEIHNYLIHKQYGLVALSGGRMNYRHFETIRFAMMRKLDVKKMFAVWRVDPPWLPV 127
L G + N + +YGLV+L + R E R AM R+ VK+ VW P +P
Sbjct: 17 LSGEAQKGNKISFGEYGLVSLEADFITARQIEAARVAMTRR--VKRGGKVWIRIFPDIPY 74
Query: 128 TKKGLGSRMGGGKGSIDHYVTPVKTGRIIIEVGGKCSYEEVLPYLRSCASKMPFKC 183
TKK +RMG GKG +DH+ PVK G ++ E+ G E + +SK+P K
Sbjct: 75 TKKPAETRMGKGKGGVDHWNAPVKLGTVMFEISG-VPRELAESAMMLASSKLPVKT 129
>sp|A0RM18|RL16_CAMFF 50S ribosomal protein L16 OS=Campylobacter fetus subsp. fetus
(strain 82-40) GN=rplP PE=3 SV=1
Length = 141
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 55/102 (53%), Gaps = 3/102 (2%)
Query: 82 QYGLVALSGGRMNYRHFETIRFAMMRKLDVKKMFAVWRVDPPWLPVTKKGLGSRMGGGKG 141
++GL A+ GR+N R E+ R A R VK+ W P P+TKK L +RMG GKG
Sbjct: 31 EFGLKAVEAGRVNSRQIESARQAYTR--HVKRQAKTWIRVFPDKPITKKPLETRMGKGKG 88
Query: 142 SIDHYVTPVKTGRIIIEVGGKCSYEEVLPYLRSCASKMPFKC 183
++ +V +K GRII E+ G S E L K+PFK
Sbjct: 89 GVEEWVMNIKPGRIIFEMSG-VSEELAREALTLAMHKLPFKT 129
>sp|Q4L8A7|RL16_STAHJ 50S ribosomal protein L16 OS=Staphylococcus haemolyticus (strain
JCSC1435) GN=rplP PE=3 SV=1
Length = 144
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 57/108 (52%), Gaps = 3/108 (2%)
Query: 76 NYLIHKQYGLVALSGGRMNYRHFETIRFAMMRKLDVKKMFAVWRVDPPWLPVTKKGLGSR 135
NY+ +YGL A + + R E+ R AM R + K+ VW P P TKK L R
Sbjct: 25 NYVTFGEYGLQATTTSWITSRQIESARIAMTRYM--KRGGKVWIKIFPHTPYTKKPLEVR 82
Query: 136 MGGGKGSIDHYVTPVKTGRIIIEVGGKCSYEEVLPYLRSCASKMPFKC 183
MG GKG+++ ++ VK GRI+ EV G S E LR + K+P K
Sbjct: 83 MGAGKGAVEGWIAVVKPGRILFEVAG-VSEEVAREALRLASHKLPVKT 129
>sp|A1A076|RL16_BIFAA 50S ribosomal protein L16 OS=Bifidobacterium adolescentis (strain
ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) GN=rplP
PE=3 SV=1
Length = 139
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 60/115 (52%), Gaps = 3/115 (2%)
Query: 69 RGPEEIHNYLIHKQYGLVALSGGRMNYRHFETIRFAMMRKLDVKKMFAVWRVDPPWLPVT 128
RG + N + +G+ AL+ + R E R AM R +K+ VW P P+T
Sbjct: 18 RGMSKGGNEIAFGDFGIQALAPAYVTNRQIEAARIAMTRY--IKRGGRVWITIFPDRPLT 75
Query: 129 KKGLGSRMGGGKGSIDHYVTPVKTGRIIIEVGGKCSYEEVLPYLRSCASKMPFKC 183
KK LG+RMG GKG+ + ++ V GR++ E+GG S + LR K+P KC
Sbjct: 76 KKPLGTRMGSGKGTPEFWIANVHPGRVMFEIGG-VSEDVAREALRRAIDKLPMKC 129
>sp|B9DM40|RL16_STACT 50S ribosomal protein L16 OS=Staphylococcus carnosus (strain TM300)
GN=rplP PE=3 SV=1
Length = 144
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 58/108 (53%), Gaps = 3/108 (2%)
Query: 76 NYLIHKQYGLVALSGGRMNYRHFETIRFAMMRKLDVKKMFAVWRVDPPWLPVTKKGLGSR 135
N++ +YGL A++ + R E+ R AM R + K+ VW P P TKK L R
Sbjct: 25 NFVTFGEYGLQAITTSWITSRQIESARIAMTRYM--KRGGKVWIKIFPHTPYTKKPLEVR 82
Query: 136 MGGGKGSIDHYVTPVKTGRIIIEVGGKCSYEEVLPYLRSCASKMPFKC 183
MG GKG+++ ++ VK GRI+ EV G S E LR + K+P K
Sbjct: 83 MGAGKGAVEGWIAVVKPGRILFEVAG-VSEEVAREALRLASHKLPVKT 129
>sp|Q18CG4|RL16_CLOD6 50S ribosomal protein L16 OS=Clostridium difficile (strain 630)
GN=rplP PE=3 SV=1
Length = 143
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 59/108 (54%), Gaps = 3/108 (2%)
Query: 76 NYLIHKQYGLVALSGGRMNYRHFETIRFAMMRKLDVKKMFAVWRVDPPWLPVTKKGLGSR 135
N + + ++GLVAL + E R AM R +K+ VW P PVT+K +R
Sbjct: 25 NKVTYGEFGLVALEASWITSNQIEAARIAMTRY--IKRGGKVWIKIFPHKPVTRKPAETR 82
Query: 136 MGGGKGSIDHYVTPVKTGRIIIEVGGKCSYEEVLPYLRSCASKMPFKC 183
MG GKGS +++V VK GR++ E+ G S ++ +R A K+P KC
Sbjct: 83 MGAGKGSPEYWVAVVKPGRVMFELAG-VSEDKAREAMRLAAHKLPIKC 129
>sp|B5RM43|RL16_BORDL 50S ribosomal protein L16 OS=Borrelia duttonii (strain Ly) GN=rplP
PE=3 SV=1
Length = 138
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 59/116 (50%), Gaps = 3/116 (2%)
Query: 68 LRGPEEIHNYLIHKQYGLVALSGGRMNYRHFETIRFAMMRKLDVKKMFAVWRVDPPWLPV 127
L G + N + +YGLV+L + R E R AM R+ VK+ VW P +P
Sbjct: 17 LSGEAQKGNKISFGEYGLVSLEADFITARQIEAARVAMTRR--VKRGGKVWIRIFPDIPY 74
Query: 128 TKKGLGSRMGGGKGSIDHYVTPVKTGRIIIEVGGKCSYEEVLPYLRSCASKMPFKC 183
TKK +RMG GKG +DH+ PVK G ++ E+ G E + +SK+P K
Sbjct: 75 TKKPAETRMGKGKGGVDHWNAPVKLGTVMFEMSG-VPRELAESAMMLASSKLPVKT 129
>sp|B1VAE1|RL16_PHYAS 50S ribosomal protein L16 OS=Phytoplasma australiense GN=rplP PE=3
SV=1
Length = 140
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 61/115 (53%), Gaps = 3/115 (2%)
Query: 70 GPEEIHNYLIHKQYGLVALSGGRMNYRHFETIRFAMMRKLDVKKMFAVWRVDPPWLPVTK 129
G + N +++ Y LVA G + + E R AM R + K+ VW P L +TK
Sbjct: 19 GKAKGKNVIVNGNYALVAKEGAFITNKQIEACRIAMNRYM--KRTGKVWINIFPHLSLTK 76
Query: 130 KGLGSRMGGGKGSIDHYVTPVKTGRIIIEVGGKCSYEEV-LPYLRSCASKMPFKC 183
K L RMG GKGS + +V VKTG+++ EV + E+V + LR + K+P K
Sbjct: 77 KPLEVRMGSGKGSPEEWVAVVKTGKVLFEVKDTSNSEKVEMEALRLASHKLPIKT 131
>sp|Q5QXY4|RL16_IDILO 50S ribosomal protein L16 OS=Idiomarina loihiensis (strain ATCC
BAA-735 / DSM 15497 / L2-TR) GN=rplP PE=3 SV=1
Length = 137
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 61/123 (49%), Gaps = 3/123 (2%)
Query: 69 RGPEEIHNYLIHKQYGLVALSGGRMNYRHFETIRFAMMRKLDVKKMFAVWRVDPPWLPVT 128
RG + N + +GL A GRM R E R AM R VK+ +W P P+T
Sbjct: 18 RGLAQSGNKVSFGTFGLKATDRGRMTARQIEAGRRAMTR--HVKRQGKIWIRVFPDKPIT 75
Query: 129 KKGLGSRMGGGKGSIDHYVTPVKTGRIIIEVGGKCSYEEVLPYLRSCASKMPFKCMPCNE 188
KK L RMG GKG+++++V ++ GR++ E+ G E R A K+PFK
Sbjct: 76 KKPLEVRMGKGKGNVEYWVAQIQPGRVLYEMDG-VPEELAREAFRLAARKLPFKTTFVTR 134
Query: 189 DIL 191
++
Sbjct: 135 TVM 137
>sp|Q6XYY0|RL16_SPIKU 50S ribosomal protein L16 OS=Spiroplasma kunkelii GN=rplP PE=3 SV=1
Length = 137
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 54/102 (52%), Gaps = 3/102 (2%)
Query: 82 QYGLVALSGGRMNYRHFETIRFAMMRKLDVKKMFAVWRVDPPWLPVTKKGLGSRMGGGKG 141
++GL +L G + R E R AM R + K+ VW P + TKK L RMG GKG
Sbjct: 31 EFGLKSLDGAWITNRQIEAARIAMTRYM--KRWGKVWIRIFPHMAKTKKPLEVRMGSGKG 88
Query: 142 SIDHYVTPVKTGRIIIEVGGKCSYEEVLPYLRSCASKMPFKC 183
S + +V VKTG ++ EV G S E L LR K+P +C
Sbjct: 89 SPEEWVAVVKTGTVMFEVAG-VSEETALEALRLAMHKLPVRC 129
>sp|Q2GED2|RL16_NEOSM 50S ribosomal protein L16 OS=Neorickettsia sennetsu (strain
Miyayama) GN=rplP PE=3 SV=1
Length = 139
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 57/104 (54%), Gaps = 3/104 (2%)
Query: 78 LIHKQYGLVALSGGRMNYRHFETIRFAMMRKLDVKKMFAVWRVDPPWLPVTKKGLGSRMG 137
L +YGL A+ R+N R E+ R + R V K +W P +P+T+K RMG
Sbjct: 27 LAFGEYGLKAIGSARLNGRQIESARRVITR--IVSKAGKLWINVFPGIPLTRKPTDVRMG 84
Query: 138 GGKGSIDHYVTPVKTGRIIIEVGGKCSYEEVLPYLRSCASKMPF 181
GGKGS+D Y+ + GR++ E+GG E+ L ++K+PF
Sbjct: 85 GGKGSVDSYIFAISPGRVLFELGG-VDREKAKLALCKASAKLPF 127
>sp|Q488A0|RL16_COLP3 50S ribosomal protein L16 OS=Colwellia psychrerythraea (strain 34H
/ ATCC BAA-681) GN=rplP PE=3 SV=1
Length = 137
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 61/123 (49%), Gaps = 3/123 (2%)
Query: 69 RGPEEIHNYLIHKQYGLVALSGGRMNYRHFETIRFAMMRKLDVKKMFAVWRVDPPWLPVT 128
RG + + + +GL ++ GRM R E R AM R VK+ +W P P+T
Sbjct: 18 RGLAHVGSSVSFGTFGLKSMERGRMTARQIEAARRAMTR--HVKRQGKIWIRVFPDKPIT 75
Query: 129 KKGLGSRMGGGKGSIDHYVTPVKTGRIIIEVGGKCSYEEVLPYLRSCASKMPFKCMPCNE 188
KK L RMG GKGS++++V + GR++ E+ G S E ASK+PFK
Sbjct: 76 KKPLEVRMGKGKGSVEYWVCQILPGRVLYEMEG-VSEEIAREAFALAASKLPFKTTFVTR 134
Query: 189 DIL 191
L
Sbjct: 135 TAL 137
>sp|A4XLS3|RL16_CALS8 50S ribosomal protein L16 OS=Caldicellulosiruptor saccharolyticus
(strain ATCC 43494 / DSM 8903) GN=rplP PE=3 SV=1
Length = 147
Score = 65.5 bits (158), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 61/116 (52%), Gaps = 3/116 (2%)
Query: 68 LRGPEEIHNYLIHKQYGLVALSGGRMNYRHFETIRFAMMRKLDVKKMFAVWRVDPPWLPV 127
++G N++ + +G++AL G + E R A+ R +K+ VW P PV
Sbjct: 17 MKGKATRGNFVAYGDFGIMALEPGWITSNQIEAARVAIAR--HIKRGGKVWIKIFPDKPV 74
Query: 128 TKKGLGSRMGGGKGSIDHYVTPVKTGRIIIEVGGKCSYEEVLPYLRSCASKMPFKC 183
T+K +RMG GKGS +++V VK GR++ EVGG E LR K+P KC
Sbjct: 75 TRKPAETRMGSGKGSPEYWVAVVKPGRVMFEVGG-VDKEVAKEALRLAIHKLPIKC 129
>sp|B2G8X1|RL16_LACRJ 50S ribosomal protein L16 OS=Lactobacillus reuteri (strain JCM
1112) GN=rplP PE=3 SV=1
Length = 144
Score = 65.5 bits (158), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 60/116 (51%), Gaps = 3/116 (2%)
Query: 68 LRGPEEIHNYLIHKQYGLVALSGGRMNYRHFETIRFAMMRKLDVKKMFAVWRVDPPWLPV 127
+RG + + ++GL AL ++ R E R AM R + K+ VW P L
Sbjct: 17 MRGEAKGGKTVTFGEFGLQALDSHWISNRQIEAARIAMTRYM--KRGGKVWIKIFPQLSY 74
Query: 128 TKKGLGSRMGGGKGSIDHYVTPVKTGRIIIEVGGKCSYEEVLPYLRSCASKMPFKC 183
T KG+G RMG GKG+ + +V PVK G+++ EVGG S E LR K+P +
Sbjct: 75 TSKGVGVRMGNGKGAPEGWVAPVKRGKVMFEVGG-VSEEVAREALRLAGHKLPVRT 129
>sp|A5VLJ8|RL16_LACRD 50S ribosomal protein L16 OS=Lactobacillus reuteri (strain DSM
20016) GN=rplP PE=3 SV=1
Length = 144
Score = 65.5 bits (158), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 60/116 (51%), Gaps = 3/116 (2%)
Query: 68 LRGPEEIHNYLIHKQYGLVALSGGRMNYRHFETIRFAMMRKLDVKKMFAVWRVDPPWLPV 127
+RG + + ++GL AL ++ R E R AM R + K+ VW P L
Sbjct: 17 MRGEAKGGKTVTFGEFGLQALDSHWISNRQIEAARIAMTRYM--KRGGKVWIKIFPQLSY 74
Query: 128 TKKGLGSRMGGGKGSIDHYVTPVKTGRIIIEVGGKCSYEEVLPYLRSCASKMPFKC 183
T KG+G RMG GKG+ + +V PVK G+++ EVGG S E LR K+P +
Sbjct: 75 TSKGVGVRMGNGKGAPEGWVAPVKRGKVMFEVGG-VSEEVAREALRLAGHKLPVRT 129
>sp|B9MKH4|RL16_CALBD 50S ribosomal protein L16 OS=Caldicellulosiruptor bescii (strain
ATCC BAA-1888 / DSM 6725 / Z-1320) GN=rplP PE=3 SV=1
Length = 147
Score = 65.5 bits (158), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 61/116 (52%), Gaps = 3/116 (2%)
Query: 68 LRGPEEIHNYLIHKQYGLVALSGGRMNYRHFETIRFAMMRKLDVKKMFAVWRVDPPWLPV 127
++G N++ + +G++AL G + E R A+ R +K+ VW P PV
Sbjct: 17 MKGKATRGNFVAYGDFGIMALEPGWITSNQIEAARVAIAR--HIKRGGKVWIKIFPDKPV 74
Query: 128 TKKGLGSRMGGGKGSIDHYVTPVKTGRIIIEVGGKCSYEEVLPYLRSCASKMPFKC 183
T+K +RMG GKGS +++V VK GR++ EVGG E LR K+P KC
Sbjct: 75 TRKPAETRMGSGKGSPEYWVAVVKPGRVMFEVGG-VDEEVAKEALRLAIHKLPIKC 129
>sp|A6QCQ5|RL16_SULNB 50S ribosomal protein L16 OS=Sulfurovum sp. (strain NBC37-1)
GN=rplP PE=3 SV=1
Length = 141
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 56/115 (48%), Gaps = 3/115 (2%)
Query: 69 RGPEEIHNYLIHKQYGLVALSGGRMNYRHFETIRFAMMRKLDVKKMFAVWRVDPPWLPVT 128
RG N + + A+ GR++ R E R M RK++ + W P P+T
Sbjct: 18 RGKSFRGNKIEFGDIAIKAVEAGRIDSRQIEAARITMTRKIN--RTGKTWIRVFPDKPLT 75
Query: 129 KKGLGSRMGGGKGSIDHYVTPVKTGRIIIEVGGKCSYEEVLPYLRSCASKMPFKC 183
K L +RMG GKG++D +V +K GRII E+ G E L KMPFKC
Sbjct: 76 AKPLETRMGKGKGAVDRWVMNIKPGRIIFEMAG-VEEELARAALTLAIHKMPFKC 129
>sp|Q7A080|RL16_STAAW 50S ribosomal protein L16 OS=Staphylococcus aureus (strain MW2)
GN=rplP PE=3 SV=1
Length = 144
Score = 65.1 bits (157), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 57/108 (52%), Gaps = 3/108 (2%)
Query: 76 NYLIHKQYGLVALSGGRMNYRHFETIRFAMMRKLDVKKMFAVWRVDPPWLPVTKKGLGSR 135
NY+ ++GL A + + R E+ R AM R + K+ VW P P TKK L R
Sbjct: 25 NYVTFGEFGLQATTTSWITSRQIESARIAMTRYM--KRGGKVWIKIFPHTPYTKKPLEVR 82
Query: 136 MGGGKGSIDHYVTPVKTGRIIIEVGGKCSYEEVLPYLRSCASKMPFKC 183
MG GKG+++ ++ VK GRI+ EV G S E LR + K+P K
Sbjct: 83 MGAGKGAVEGWIAVVKPGRILFEVAG-VSEEVAREALRLASHKLPVKT 129
>sp|Q6G778|RL16_STAAS 50S ribosomal protein L16 OS=Staphylococcus aureus (strain MSSA476)
GN=rplP PE=3 SV=1
Length = 144
Score = 65.1 bits (157), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 57/108 (52%), Gaps = 3/108 (2%)
Query: 76 NYLIHKQYGLVALSGGRMNYRHFETIRFAMMRKLDVKKMFAVWRVDPPWLPVTKKGLGSR 135
NY+ ++GL A + + R E+ R AM R + K+ VW P P TKK L R
Sbjct: 25 NYVTFGEFGLQATTTSWITSRQIESARIAMTRYM--KRGGKVWIKIFPHTPYTKKPLEVR 82
Query: 136 MGGGKGSIDHYVTPVKTGRIIIEVGGKCSYEEVLPYLRSCASKMPFKC 183
MG GKG+++ ++ VK GRI+ EV G S E LR + K+P K
Sbjct: 83 MGAGKGAVEGWIAVVKPGRILFEVAG-VSEEVAREALRLASHKLPVKT 129
>sp|Q6GEJ0|RL16_STAAR 50S ribosomal protein L16 OS=Staphylococcus aureus (strain MRSA252)
GN=rplP PE=3 SV=1
Length = 144
Score = 65.1 bits (157), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 57/108 (52%), Gaps = 3/108 (2%)
Query: 76 NYLIHKQYGLVALSGGRMNYRHFETIRFAMMRKLDVKKMFAVWRVDPPWLPVTKKGLGSR 135
NY+ ++GL A + + R E+ R AM R + K+ VW P P TKK L R
Sbjct: 25 NYVTFGEFGLQATTTSWITSRQIESARIAMTRYM--KRGGKVWIKIFPHTPYTKKPLEVR 82
Query: 136 MGGGKGSIDHYVTPVKTGRIIIEVGGKCSYEEVLPYLRSCASKMPFKC 183
MG GKG+++ ++ VK GRI+ EV G S E LR + K+P K
Sbjct: 83 MGAGKGAVEGWIAVVKPGRILFEVAG-VSEEVAREALRLASHKLPVKT 129
>sp|Q7A461|RL16_STAAN 50S ribosomal protein L16 OS=Staphylococcus aureus (strain N315)
GN=rplP PE=1 SV=1
Length = 144
Score = 65.1 bits (157), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 57/108 (52%), Gaps = 3/108 (2%)
Query: 76 NYLIHKQYGLVALSGGRMNYRHFETIRFAMMRKLDVKKMFAVWRVDPPWLPVTKKGLGSR 135
NY+ ++GL A + + R E+ R AM R + K+ VW P P TKK L R
Sbjct: 25 NYVTFGEFGLQATTTSWITSRQIESARIAMTRYM--KRGGKVWIKIFPHTPYTKKPLEVR 82
Query: 136 MGGGKGSIDHYVTPVKTGRIIIEVGGKCSYEEVLPYLRSCASKMPFKC 183
MG GKG+++ ++ VK GRI+ EV G S E LR + K+P K
Sbjct: 83 MGAGKGAVEGWIAVVKPGRILFEVAG-VSEEVAREALRLASHKLPVKT 129
>sp|Q99S28|RL16_STAAM 50S ribosomal protein L16 OS=Staphylococcus aureus (strain Mu50 /
ATCC 700699) GN=rplP PE=1 SV=1
Length = 144
Score = 65.1 bits (157), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 57/108 (52%), Gaps = 3/108 (2%)
Query: 76 NYLIHKQYGLVALSGGRMNYRHFETIRFAMMRKLDVKKMFAVWRVDPPWLPVTKKGLGSR 135
NY+ ++GL A + + R E+ R AM R + K+ VW P P TKK L R
Sbjct: 25 NYVTFGEFGLQATTTSWITSRQIESARIAMTRYM--KRGGKVWIKIFPHTPYTKKPLEVR 82
Query: 136 MGGGKGSIDHYVTPVKTGRIIIEVGGKCSYEEVLPYLRSCASKMPFKC 183
MG GKG+++ ++ VK GRI+ EV G S E LR + K+P K
Sbjct: 83 MGAGKGAVEGWIAVVKPGRILFEVAG-VSEEVAREALRLASHKLPVKT 129
>sp|A6QJ85|RL16_STAAE 50S ribosomal protein L16 OS=Staphylococcus aureus (strain Newman)
GN=rplP PE=3 SV=1
Length = 144
Score = 65.1 bits (157), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 57/108 (52%), Gaps = 3/108 (2%)
Query: 76 NYLIHKQYGLVALSGGRMNYRHFETIRFAMMRKLDVKKMFAVWRVDPPWLPVTKKGLGSR 135
NY+ ++GL A + + R E+ R AM R + K+ VW P P TKK L R
Sbjct: 25 NYVTFGEFGLQATTTSWITSRQIESARIAMTRYM--KRGGKVWIKIFPHTPYTKKPLEVR 82
Query: 136 MGGGKGSIDHYVTPVKTGRIIIEVGGKCSYEEVLPYLRSCASKMPFKC 183
MG GKG+++ ++ VK GRI+ EV G S E LR + K+P K
Sbjct: 83 MGAGKGAVEGWIAVVKPGRILFEVAG-VSEEVAREALRLASHKLPVKT 129
>sp|Q5HDW5|RL16_STAAC 50S ribosomal protein L16 OS=Staphylococcus aureus (strain COL)
GN=rplP PE=3 SV=1
Length = 144
Score = 65.1 bits (157), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 57/108 (52%), Gaps = 3/108 (2%)
Query: 76 NYLIHKQYGLVALSGGRMNYRHFETIRFAMMRKLDVKKMFAVWRVDPPWLPVTKKGLGSR 135
NY+ ++GL A + + R E+ R AM R + K+ VW P P TKK L R
Sbjct: 25 NYVTFGEFGLQATTTSWITSRQIESARIAMTRYM--KRGGKVWIKIFPHTPYTKKPLEVR 82
Query: 136 MGGGKGSIDHYVTPVKTGRIIIEVGGKCSYEEVLPYLRSCASKMPFKC 183
MG GKG+++ ++ VK GRI+ EV G S E LR + K+P K
Sbjct: 83 MGAGKGAVEGWIAVVKPGRILFEVAG-VSEEVAREALRLASHKLPVKT 129
>sp|Q2YYQ3|RL16_STAAB 50S ribosomal protein L16 OS=Staphylococcus aureus (strain bovine
RF122 / ET3-1) GN=rplP PE=3 SV=1
Length = 144
Score = 65.1 bits (157), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 57/108 (52%), Gaps = 3/108 (2%)
Query: 76 NYLIHKQYGLVALSGGRMNYRHFETIRFAMMRKLDVKKMFAVWRVDPPWLPVTKKGLGSR 135
NY+ ++GL A + + R E+ R AM R + K+ VW P P TKK L R
Sbjct: 25 NYVTFGEFGLQATTTSWITSRQIESARIAMTRYM--KRGGKVWIKIFPHTPYTKKPLEVR 82
Query: 136 MGGGKGSIDHYVTPVKTGRIIIEVGGKCSYEEVLPYLRSCASKMPFKC 183
MG GKG+++ ++ VK GRI+ EV G S E LR + K+P K
Sbjct: 83 MGAGKGAVEGWIAVVKPGRILFEVAG-VSEEVAREALRLASHKLPVKT 129
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.141 0.448
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 100,291,055
Number of Sequences: 539616
Number of extensions: 4369151
Number of successful extensions: 11801
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1061
Number of HSP's successfully gapped in prelim test: 41
Number of HSP's that attempted gapping in prelim test: 10382
Number of HSP's gapped (non-prelim): 1105
length of query: 240
length of database: 191,569,459
effective HSP length: 114
effective length of query: 126
effective length of database: 130,053,235
effective search space: 16386707610
effective search space used: 16386707610
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)