Your job contains 1 sequence.
>psy6080
MSLRFPQKANRRPIGQIVCTAGLKNIKKPPNYDHIVMPERPRLKFVDKVPTFIYNHKTPR
TTKRLDLLRGPEEIHNYLIHKQYGLVALSGGRMNYRHFETIRFAMMRKLDVKKMFAVWRV
DPPWLPVTKKGLGSRMGGGKGSIDHYVTPVKTGRIIIEVGGKCSYEEVLPYLRSCASKMP
FKCMPCNEDILREMKEKEEREARDNINPYTFEYMIKNNIGNCRQWISTHVDYKYFGKYFG
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy6080
(240 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0023519 - symbol:mRpL16 "mitochondrial ribosomal p... 523 2.8e-50 1
UNIPROTKB|H9KZA7 - symbol:MRPL16 "Uncharacterized protein... 427 4.2e-40 1
UNIPROTKB|J9NSP6 - symbol:LOC100855841 "Uncharacterized p... 389 4.4e-36 1
UNIPROTKB|H9GWA5 - symbol:LOC100855841 "Uncharacterized p... 386 9.2e-36 1
UNIPROTKB|J9NVJ0 - symbol:LOC100855464 "Uncharacterized p... 386 9.2e-36 1
UNIPROTKB|F1RI89 - symbol:MRPL16 "Uncharacterized protein... 386 9.2e-36 1
UNIPROTKB|Q9NX20 - symbol:MRPL16 "39S ribosomal protein L... 384 1.5e-35 1
MGI|MGI:2137219 - symbol:Mrpl16 "mitochondrial ribosomal ... 376 1.1e-34 1
RGD|735195 - symbol:Mrpl16 "mitochondrial ribosomal prote... 373 2.2e-34 1
UNIPROTKB|Q3T0J3 - symbol:MRPL16 "39S ribosomal protein L... 369 5.8e-34 1
ZFIN|ZDB-GENE-041122-1 - symbol:mrpl16 "mitochondrial rib... 368 7.4e-34 1
WB|WBGene00011412 - symbol:mrpl-16 species:6239 "Caenorha... 314 3.9e-28 1
UNIPROTKB|E9PI14 - symbol:MRPL16 "39S ribosomal protein L... 205 1.4e-16 1
TIGR_CMR|SPO_0488 - symbol:SPO_0488 "ribosomal protein L1... 116 6.7e-07 1
TIGR_CMR|CPS_0866 - symbol:CPS_0866 "ribosomal protein L1... 113 1.5e-06 1
TIGR_CMR|NSE_0273 - symbol:NSE_0273 "ribosomal protein L1... 111 2.5e-06 1
UNIPROTKB|Q9KNZ1 - symbol:rplP "50S ribosomal protein L16... 106 9.5e-06 1
TIGR_CMR|CJE_1868 - symbol:CJE_1868 "ribosomal protein L1... 106 9.5e-06 1
TIGR_CMR|VC_2589 - symbol:VC_2589 "ribosomal protein L16"... 106 9.5e-06 1
TIGR_CMR|APH_0287 - symbol:APH_0287 "ribosomal protein L1... 99 0.00012 1
UNIPROTKB|P0ADY7 - symbol:rplP "50S ribosomal subunit pro... 97 0.00040 1
>FB|FBgn0023519 [details] [associations]
symbol:mRpL16 "mitochondrial ribosomal protein L16"
species:7227 "Drosophila melanogaster" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0005762 "mitochondrial large ribosomal subunit"
evidence=ISS] [GO:0019843 "rRNA binding" evidence=IEA]
InterPro:IPR000114 InterPro:IPR016180 Pfam:PF00252 GO:GO:0006412
GO:GO:0005762 GO:GO:0003735 GO:GO:0019843 EMBL:AL021106
PANTHER:PTHR12220 SUPFAM:SSF54686 eggNOG:NOG294174 PIR:T12688
ProteinModelPortal:O46082 SMR:O46082 STRING:O46082 PaxDb:O46082
FlyBase:FBgn0023519 InParanoid:O46082 OrthoDB:EOG4TQJRX Bgee:O46082
Uniprot:O46082
Length = 254
Score = 523 (189.2 bits), Expect = 2.8e-50, P = 2.8e-50
Identities = 92/222 (41%), Positives = 139/222 (62%)
Query: 17 IVCTAGLKNIKKPPNYDHIVMPERPRLKFVDKVPTFIYNHKTPRTTKRLDLLRGPEEIHN 76
IV TAGLK P Y ++ PERP+L+ +++ P N + P+ KRL +RGPE +HN
Sbjct: 33 IVNTAGLKYFAPPIKYQNVEQPERPKLRVIERQPQLPPNIRPPKMQKRLRYMRGPEMVHN 92
Query: 77 YLIHKQYGLVALSGGRMNYRHFETIRFAMMRKLDVKKMFAVWRVDPPWLPVTXXXXXXXX 136
L+HKQY +VA GGR+ + H+E +R + RK++V MFA WRV PW P+T
Sbjct: 93 TLLHKQYAIVATGGGRLRWGHYEMMRLTIGRKMNVNTMFATWRVPAPWQPITKKGQGQRM 152
Query: 137 XXXXXSIDHYVTPVKTGRIIIEVGGKCSYEEVLPYLRSCASKMPFKCMPCNEDILXXXXX 196
+IDHYVTP+K GR+I+E+ GKC + EV +L+ A+++PF+ ++++L
Sbjct: 153 GGGKGAIDHYVTPIKAGRVIVEIAGKCEFVEVKQFLQQVANQLPFQATVVSQEMLDEQRV 212
Query: 197 XXXXXARDNINPYTFEYMIKNNIGNCRQWISTHVDYKYFGKY 238
R N NP+T +Y+I+NN+ C +W+S VD+K+FGK+
Sbjct: 213 AEEEQTRQNENPFTMKYVIQNNLSGCHRWLSP-VDHKWFGKH 253
>UNIPROTKB|H9KZA7 [details] [associations]
symbol:MRPL16 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0019843
"rRNA binding" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR000114
InterPro:IPR016180 Pfam:PF00252 PRINTS:PR00060 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 GO:GO:0019843 PANTHER:PTHR12220
SUPFAM:SSF54686 GeneTree:ENSGT00390000002038 OMA:SPYDLTH
EMBL:AADN02075775 Ensembl:ENSGALT00000008326 Uniprot:H9KZA7
Length = 238
Score = 427 (155.4 bits), Expect = 4.2e-40, P = 4.2e-40
Identities = 87/226 (38%), Positives = 130/226 (57%)
Query: 15 GQIVCTAGLKNIKKPPNYDHIVMPERPRLKFVDKVPTFIYNHKTPRTTKRLDLLRGPEEI 74
G V AGLK PP+Y I +PERP+LKF++KVP+ + PR + D+ RGP ++
Sbjct: 9 GSAVPRAGLKKFVLPPDYSGITLPERPKLKFMEKVPSVPKARREPRQLR--DI-RGPSQV 65
Query: 75 HNYLIHKQYGLVALSGGRMNYRHFETIRFAMMRKLDVKKMFAVWRVDPPWLPVTXXXXXX 134
QYG++AL GG +++ H E IR + R +D K MFA+WRV P+ P+T
Sbjct: 66 ATNFTQGQYGILALGGGYLHWGHLEMIRLTIGRCMDPKNMFAIWRVPAPYKPLTKKSLGH 125
Query: 135 XXXXXXXSIDHYVTPVKTGRIIIEVGGKCSYEEVLPYLRSCASKMPFKCMPCNEDILXXX 194
ID YVT VK+GR+++E+GG+C +EEV P+L A K+PF + + L
Sbjct: 126 RMGGGKGPIDRYVTAVKSGRLVVELGGRCEFEEVKPFLTQVAHKLPFPAVAVSRQSLQQM 185
Query: 195 XXXXXXXARDNINPYTFEYMIKNNIGNCRQWISTHVDYKYFGKYFG 240
+N NP+TFE +I +N+ R+++S + D K G+Y+G
Sbjct: 186 REEEEEKRVNNQNPWTFERVITSNMLGMRRYLSPY-DLKLKGRYWG 230
>UNIPROTKB|J9NSP6 [details] [associations]
symbol:LOC100855841 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005840 "ribosome" evidence=IEA]
[GO:0019843 "rRNA binding" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] InterPro:IPR000114 InterPro:IPR016180 Pfam:PF00252
PRINTS:PR00060 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
GO:GO:0019843 PANTHER:PTHR12220 SUPFAM:SSF54686
GeneTree:ENSGT00390000002038 OMA:SPYDLTH Ensembl:ENSCAFT00000045009
Uniprot:J9NSP6
Length = 274
Score = 389 (142.0 bits), Expect = 4.4e-36, P = 4.4e-36
Identities = 82/240 (34%), Positives = 130/240 (54%)
Query: 1 MSLRFPQKANRRPIGQIVCTAGLKNIKKPPNYDHIVMPERPRLKFVDKVPTFIYNHKTPR 60
+SL FP P + AGLK + P ++ + +PE+P+L+FV++VP K R
Sbjct: 35 VSLPFPLGPRAAPPAR----AGLKTLLPVPTFEDVSIPEKPKLRFVERVPLV---PKVRR 87
Query: 61 TTKRLDLLRGPEEIHNYLIHKQYGLVALSGGRMNYRHFETIRFAMMRKLDVKKMFAVWRV 120
K L +RGP + ++AL GG +++ HFE +R + R +D K MFA+WRV
Sbjct: 88 EPKNLSDIRGPSTEATEFTEGNFAILALGGGYLHWGHFEMMRLTINRSMDPKNMFALWRV 147
Query: 121 DPPWLPVTXXXXXXXXXXXXXSIDHYVTPVKTGRIIIEVGGKCSYEEVLPYLRSCASKMP 180
P+ P+T +IDHYVTPVK GR+I+E+GG+C ++EV +L A K+P
Sbjct: 148 PAPFKPITRKGVGQRMGGGKGAIDHYVTPVKAGRLIVELGGRCEFKEVQGFLDQVAHKLP 207
Query: 181 FKCMPCNEDILXXXXXXXXXXARDNINPYTFEYMIKNNIGNCRQWISTHVDYKYFGKYFG 240
F + + L ++N NP+TFE ++ N+ R+++S + D G+Y+G
Sbjct: 208 FTAKAVSRETLEKMRRDQEEREQNNQNPWTFERIVTANMLGIRKYLSPY-DLTQKGRYWG 266
>UNIPROTKB|H9GWA5 [details] [associations]
symbol:LOC100855841 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005840 "ribosome" evidence=IEA]
[GO:0019843 "rRNA binding" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] InterPro:IPR000114 InterPro:IPR016180 Pfam:PF00252
PRINTS:PR00060 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
GO:GO:0019843 PANTHER:PTHR12220 SUPFAM:SSF54686
GeneTree:ENSGT00390000002038 Ensembl:ENSCAFT00000016396
Uniprot:H9GWA5
Length = 252
Score = 386 (140.9 bits), Expect = 9.2e-36, P = 9.2e-36
Identities = 77/220 (35%), Positives = 123/220 (55%)
Query: 21 AGLKNIKKPPNYDHIVMPERPRLKFVDKVPTFIYNHKTPRTTKRLDLLRGPEEIHNYLIH 80
AGLK + P ++ + +PE+P+L+FV++VP K R K L +RGP
Sbjct: 29 AGLKTLLPVPTFEDVSIPEKPKLRFVERVPLV---PKVRREPKNLSDIRGPSTEATEFTE 85
Query: 81 KQYGLVALSGGRMNYRHFETIRFAMMRKLDVKKMFAVWRVDPPWLPVTXXXXXXXXXXXX 140
+ ++AL GG +++ HFE +R + R +D K MFA+WRV P+ P+T
Sbjct: 86 GNFAILALGGGYLHWGHFEMMRLTINRSMDPKNMFALWRVPAPFKPITRKGVGQRMGGGK 145
Query: 141 XSIDHYVTPVKTGRIIIEVGGKCSYEEVLPYLRSCASKMPFKCMPCNEDILXXXXXXXXX 200
+IDHYVTPVK GR+I+E+GG+C ++EV +L A K+PF + + L
Sbjct: 146 GAIDHYVTPVKAGRLIVELGGRCEFKEVQGFLDQVAHKLPFTAKAVSRETLEKMRRDQEE 205
Query: 201 XARDNINPYTFEYMIKNNIGNCRQWISTHVDYKYFGKYFG 240
++N NP+TFE ++ N+ R+++S + D G+Y+G
Sbjct: 206 REQNNQNPWTFERIVTANMLGIRKYLSPY-DLTQKGRYWG 244
>UNIPROTKB|J9NVJ0 [details] [associations]
symbol:LOC100855464 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005840 "ribosome" evidence=IEA]
[GO:0019843 "rRNA binding" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] InterPro:IPR000114 InterPro:IPR016180 Pfam:PF00252
PRINTS:PR00060 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
GO:GO:0019843 PANTHER:PTHR12220 SUPFAM:SSF54686
GeneTree:ENSGT00390000002038 EMBL:AAEX03013048
RefSeq:XP_003639835.1 Ensembl:ENSCAFT00000044241 GeneID:100855464
KEGG:cfa:100855464 OMA:NTHRAVT Uniprot:J9NVJ0
Length = 251
Score = 386 (140.9 bits), Expect = 9.2e-36, P = 9.2e-36
Identities = 77/220 (35%), Positives = 123/220 (55%)
Query: 21 AGLKNIKKPPNYDHIVMPERPRLKFVDKVPTFIYNHKTPRTTKRLDLLRGPEEIHNYLIH 80
AGLK + P ++ + +PE+P+L+FV++VP K R K L +RGP
Sbjct: 28 AGLKTLLPVPTFEDVSIPEKPKLRFVERVPLV---PKVRREPKNLSDIRGPSTEATEFTE 84
Query: 81 KQYGLVALSGGRMNYRHFETIRFAMMRKLDVKKMFAVWRVDPPWLPVTXXXXXXXXXXXX 140
+ ++AL GG +++ HFE +R + R +D K MFA+WRV P+ P+T
Sbjct: 85 GNFAILALGGGYLHWGHFEMMRLTINRSMDPKNMFALWRVPAPFKPITRKGVGQRMGGGK 144
Query: 141 XSIDHYVTPVKTGRIIIEVGGKCSYEEVLPYLRSCASKMPFKCMPCNEDILXXXXXXXXX 200
+IDHYVTPVK GR+I+E+GG+C ++EV +L A K+PF + + L
Sbjct: 145 GAIDHYVTPVKAGRLIVELGGRCEFKEVQGFLDQVAHKLPFTAKAVSRETLEKMRRDQEE 204
Query: 201 XARDNINPYTFEYMIKNNIGNCRQWISTHVDYKYFGKYFG 240
++N NP+TFE ++ N+ R+++S + D G+Y+G
Sbjct: 205 REQNNQNPWTFERIVTANMLGIRKYLSPY-DLTQKGRYWG 243
>UNIPROTKB|F1RI89 [details] [associations]
symbol:MRPL16 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0019843 "rRNA binding" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR000114
InterPro:IPR016180 Pfam:PF00252 PRINTS:PR00060 GO:GO:0005739
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 GO:GO:0019843
PANTHER:PTHR12220 SUPFAM:SSF54686 CTD:54948
GeneTree:ENSGT00390000002038 OMA:SPYDLTH EMBL:FP074885
RefSeq:NP_001231896.1 UniGene:Ssc.2526 Ensembl:ENSSSCT00000014338
GeneID:100514446 KEGG:ssc:100514446 ArrayExpress:F1RI89
Uniprot:F1RI89
Length = 251
Score = 386 (140.9 bits), Expect = 9.2e-36, P = 9.2e-36
Identities = 78/221 (35%), Positives = 123/221 (55%)
Query: 20 TAGLKNIKKPPNYDHIVMPERPRLKFVDKVPTFIYNHKTPRTTKRLDLLRGPEEIHNYLI 79
TAG K + P ++ + +PE+P+L+FV++VP K R K L +RGP
Sbjct: 27 TAGFKTLLPVPTFEDVAIPEKPKLRFVERVPLV---PKVRRERKNLSDIRGPSTEATEFT 83
Query: 80 HKQYGLVALSGGRMNYRHFETIRFAMMRKLDVKKMFAVWRVDPPWLPVTXXXXXXXXXXX 139
++ ++AL GG +++ HFE +R + R +D K MFA+WRV P+ P+T
Sbjct: 84 EGRFAILALGGGYLHWGHFEMMRLTINRSMDPKNMFALWRVPAPFKPITRKGMGQRMGGG 143
Query: 140 XXSIDHYVTPVKTGRIIIEVGGKCSYEEVLPYLRSCASKMPFKCMPCNEDILXXXXXXXX 199
+IDHYVTPVK GR+I+E+GG+C ++EV +L A K+PF + + L
Sbjct: 144 KGAIDHYVTPVKAGRLIVEMGGRCEFKEVQGFLDLVAHKLPFPAKAVSRETLEKMRKDQE 203
Query: 200 XXARDNINPYTFEYMIKNNIGNCRQWISTHVDYKYFGKYFG 240
R+N NP+TFE + N+ R+ +S + D + G+Y+G
Sbjct: 204 ERERNNQNPWTFERIATANMLGIRKVLSPY-DLTHKGRYWG 243
>UNIPROTKB|Q9NX20 [details] [associations]
symbol:MRPL16 "39S ribosomal protein L16, mitochondrial"
species:9606 "Homo sapiens" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0019843 "rRNA binding" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR000114 InterPro:IPR016180 Pfam:PF00252 PRINTS:PR00060
EMBL:AB049642 GO:GO:0005739 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 GO:GO:0019843 PANTHER:PTHR12220 SUPFAM:SSF54686
eggNOG:COG0197 CTD:54948 HOGENOM:HOG000021349 HOVERGEN:HBG056553
OMA:SPYDLTH OrthoDB:EOG4K6G50 EMBL:AF183428 EMBL:AK000491
EMBL:CR457117 EMBL:BC001040 EMBL:BC019269 EMBL:AF275806
IPI:IPI00000821 RefSeq:NP_060310.1 UniGene:Hs.530734
ProteinModelPortal:Q9NX20 SMR:Q9NX20 IntAct:Q9NX20 STRING:Q9NX20
PhosphoSite:Q9NX20 DMDM:74734684 PaxDb:Q9NX20 PeptideAtlas:Q9NX20
PRIDE:Q9NX20 DNASU:54948 Ensembl:ENST00000300151 GeneID:54948
KEGG:hsa:54948 UCSC:uc001noh.2 GeneCards:GC11M059573
HGNC:HGNC:14476 MIM:611829 neXtProt:NX_Q9NX20 PharmGKB:PA30945
InParanoid:Q9NX20 PhylomeDB:Q9NX20 ChiTaRS:MRPL16 GenomeRNAi:54948
NextBio:58115 ArrayExpress:Q9NX20 Bgee:Q9NX20 CleanEx:HS_MRPL16
Genevestigator:Q9NX20 GermOnline:ENSG00000166902 Uniprot:Q9NX20
Length = 251
Score = 384 (140.2 bits), Expect = 1.5e-35, P = 1.5e-35
Identities = 76/221 (34%), Positives = 122/221 (55%)
Query: 20 TAGLKNIKKPPNYDHIVMPERPRLKFVDKVPTFIYNHKTPRTTKRLDLLRGPEEIHNYLI 79
+AG+K + P+++ + +PE+P+L+F+++ P K R K L +RGP
Sbjct: 27 SAGVKTLLPVPSFEDVSIPEKPKLRFIERAPLV---PKVRREPKNLSDIRGPSTEATEFT 83
Query: 80 HKQYGLVALSGGRMNYRHFETIRFAMMRKLDVKKMFAVWRVDPPWLPVTXXXXXXXXXXX 139
+ ++AL GG +++ HFE +R + R +D K MFA+WRV P+ P+T
Sbjct: 84 EGNFAILALGGGYLHWGHFEMMRLTINRSMDPKNMFAIWRVPAPFKPITRKSVGHRMGGG 143
Query: 140 XXSIDHYVTPVKTGRIIIEVGGKCSYEEVLPYLRSCASKMPFKCMPCNEDILXXXXXXXX 199
+IDHYVTPVK GR+++E+GG+C +EEV +L A K+PF + L
Sbjct: 144 KGAIDHYVTPVKAGRLVVEMGGRCEFEEVQGFLDQVAHKLPFAAKAVSRGTLEKMRKDQE 203
Query: 200 XXARDNINPYTFEYMIKNNIGNCRQWISTHVDYKYFGKYFG 240
R+N NP+TFE + N+ R+ +S + D + GKY+G
Sbjct: 204 ERERNNQNPWTFERIATANMLGIRKVLSPY-DLTHKGKYWG 243
>MGI|MGI:2137219 [details] [associations]
symbol:Mrpl16 "mitochondrial ribosomal protein L16"
species:10090 "Mus musculus" [GO:0003735 "structural constituent of
ribosome" evidence=ISO] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005762 "mitochondrial large ribosomal subunit" evidence=ISO]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=ISO] [GO:0019843 "rRNA binding" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] InterPro:IPR000114
InterPro:IPR016180 Pfam:PF00252 PRINTS:PR00060 MGI:MGI:2137219
GO:GO:0005739 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
GO:GO:0019843 PANTHER:PTHR12220 SUPFAM:SSF54686 CTD:54948
eggNOG:NOG294174 GeneTree:ENSGT00390000002038 HOGENOM:HOG000021349
HOVERGEN:HBG056553 OMA:SPYDLTH OrthoDB:EOG4K6G50 EMBL:AB049643
EMBL:AK165616 EMBL:BC044721 IPI:IPI00118230 RefSeq:NP_079882.2
UniGene:Mm.203928 ProteinModelPortal:Q99N93 SMR:Q99N93
STRING:Q99N93 PhosphoSite:Q99N93 PaxDb:Q99N93 PRIDE:Q99N93
Ensembl:ENSMUST00000167199 GeneID:94063 KEGG:mmu:94063
UCSC:uc008gsx.1 InParanoid:Q99N93 NextBio:352037 Bgee:Q99N93
CleanEx:MM_MRPL16 Genevestigator:Q99N93
GermOnline:ENSMUSG00000024683 Uniprot:Q99N93
Length = 251
Score = 376 (137.4 bits), Expect = 1.1e-34, P = 1.1e-34
Identities = 78/221 (35%), Positives = 121/221 (54%)
Query: 20 TAGLKNIKKPPNYDHIVMPERPRLKFVDKVPTFIYNHKTPRTTKRLDLLRGPEEIHNYLI 79
+AGLK + P ++++ +PER +LKFV++VP K R K L +RGP
Sbjct: 27 SAGLKTLLPVPTFENVSIPERSKLKFVERVPLV---PKVRREPKNLKDIRGPSTEATDFT 83
Query: 80 HKQYGLVALSGGRMNYRHFETIRFAMMRKLDVKKMFAVWRVDPPWLPVTXXXXXXXXXXX 139
+ ++AL GG +++ HFE +R + R +D K MFA+WRV P+ P+T
Sbjct: 84 EGNFAILALGGGYLHWGHFEMMRLTINRFMDPKNMFAIWRVPAPFKPITRKGVGQRMGGG 143
Query: 140 XXSIDHYVTPVKTGRIIIEVGGKCSYEEVLPYLRSCASKMPFKCMPCNEDILXXXXXXXX 199
+IDHYVTPVKTG +++E+GG+C +EEV L A K+PF + L
Sbjct: 144 KGAIDHYVTPVKTGCLVVEMGGRCEFEEVKGILNQVAHKLPFPAKAVSRKTLERMHQNQR 203
Query: 200 XXARDNINPYTFEYMIKNNIGNCRQWISTHVDYKYFGKYFG 240
+N NP+TFE++ N+ R+++S + D G+Y+G
Sbjct: 204 ERELNNQNPWTFEHIATANMFGIRKFLSPY-DLTQKGRYWG 243
>RGD|735195 [details] [associations]
symbol:Mrpl16 "mitochondrial ribosomal protein L16" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0019843 "rRNA binding"
evidence=IEA] InterPro:IPR000114 InterPro:IPR016180 Pfam:PF00252
PRINTS:PR00060 RGD:735195 GO:GO:0005739 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 GO:GO:0019843 PANTHER:PTHR12220 SUPFAM:SSF54686
eggNOG:COG0197 CTD:54948 GeneTree:ENSGT00390000002038
HOGENOM:HOG000021349 HOVERGEN:HBG056553 OMA:SPYDLTH
OrthoDB:EOG4K6G50 EMBL:BC088312 IPI:IPI00206879
RefSeq:NP_001009647.1 UniGene:Rn.101972 ProteinModelPortal:Q5M818
STRING:Q5M818 PRIDE:Q5M818 Ensembl:ENSRNOT00000028517 GeneID:293754
KEGG:rno:293754 UCSC:RGD:735195 InParanoid:Q5M818 NextBio:636939
ArrayExpress:Q5M818 Genevestigator:Q5M818
GermOnline:ENSRNOG00000021005 Uniprot:Q5M818
Length = 251
Score = 373 (136.4 bits), Expect = 2.2e-34, P = 2.2e-34
Identities = 79/221 (35%), Positives = 120/221 (54%)
Query: 20 TAGLKNIKKPPNYDHIVMPERPRLKFVDKVPTFIYNHKTPRTTKRLDLLRGPEEIHNYLI 79
+AGLK + P ++++ +PER +LKFV++VP K R K L +RGP
Sbjct: 27 SAGLKTLLPVPTFENVSIPERSKLKFVERVPLV---PKVRREPKNLKDIRGPSAEATDFT 83
Query: 80 HKQYGLVALSGGRMNYRHFETIRFAMMRKLDVKKMFAVWRVDPPWLPVTXXXXXXXXXXX 139
+ ++AL GG +++ HFE +R + R +D K MFA+WRV P+ P+T
Sbjct: 84 EGNFAILALGGGYLHWGHFEMMRLTINRFMDPKNMFAIWRVPAPFKPITRKGVGQRMGGG 143
Query: 140 XXSIDHYVTPVKTGRIIIEVGGKCSYEEVLPYLRSCASKMPFKCMPCNEDILXXXXXXXX 199
+IDHYVTPVKTG +I+E+GG+C +EEV L A K+PF + L
Sbjct: 144 KGAIDHYVTPVKTGCLIVEMGGRCEFEEVKRVLNQVAHKLPFPAKAVSRKTLEKMHQNQK 203
Query: 200 XXARDNINPYTFEYMIKNNIGNCRQWISTHVDYKYFGKYFG 240
+N NP+TFE + N+ R+++S + D G+Y+G
Sbjct: 204 ERELNNQNPWTFERIATANMFGIRKFLSPY-DLTQKGRYWG 243
>UNIPROTKB|Q3T0J3 [details] [associations]
symbol:MRPL16 "39S ribosomal protein L16, mitochondrial"
species:9913 "Bos taurus" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0019843 "rRNA binding"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR000114 InterPro:IPR016180 Pfam:PF00252 PRINTS:PR00060
GO:GO:0005739 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
GO:GO:0019843 PANTHER:PTHR12220 SUPFAM:SSF54686 PDB:2FTC
PDBsum:2FTC EMBL:BC102369 IPI:IPI00718214 RefSeq:NP_001029813.1
UniGene:Bt.4402 ProteinModelPortal:Q3T0J3 STRING:Q3T0J3
PRIDE:Q3T0J3 Ensembl:ENSBTAT00000028236 GeneID:538054
KEGG:bta:538054 CTD:54948 eggNOG:NOG294174
GeneTree:ENSGT00390000002038 HOGENOM:HOG000021349
HOVERGEN:HBG056553 InParanoid:Q3T0J3 OMA:SPYDLTH OrthoDB:EOG4K6G50
EvolutionaryTrace:Q3T0J3 NextBio:20877272 Uniprot:Q3T0J3
Length = 251
Score = 369 (135.0 bits), Expect = 5.8e-34, P = 5.8e-34
Identities = 77/220 (35%), Positives = 119/220 (54%)
Query: 21 AGLKNIKKPPNYDHIVMPERPRLKFVDKVPTFIYNHKTPRTTKRLDLLRGPEEIHNYLIH 80
AGLK + P ++ + +PE+P+L+FV++ P K R K L +RGP
Sbjct: 28 AGLKTLLPVPTFEDVSIPEKPKLRFVERAPLV---PKVRREPKNLRDIRGPSTEATEFTE 84
Query: 81 KQYGLVALSGGRMNYRHFETIRFAMMRKLDVKKMFAVWRVDPPWLPVTXXXXXXXXXXXX 140
+ ++AL GG +++ HFE +R + R +D K MFA+WRV P+ +T
Sbjct: 85 GNFAILALGGGYLHWGHFEMMRLTINRFMDPKNMFALWRVPAPFKAITRKGMGQRMGGGK 144
Query: 141 XSIDHYVTPVKTGRIIIEVGGKCSYEEVLPYLRSCASKMPFKCMPCNEDILXXXXXXXXX 200
+IDHYVTPVK GR+I+EVGG+C ++EV L A K+PF + + L
Sbjct: 145 GAIDHYVTPVKAGRLIVEVGGRCEFQEVQGILNQVAHKLPFPAKAVSRETLEKIQKDQEE 204
Query: 201 XARDNINPYTFEYMIKNNIGNCRQWISTHVDYKYFGKYFG 240
R+N NP+TFE + N+ R+ +S + D + G+Y+G
Sbjct: 205 RERNNQNPWTFERIATANMLGIRKVLSPY-DLTHRGRYWG 243
>ZFIN|ZDB-GENE-041122-1 [details] [associations]
symbol:mrpl16 "mitochondrial ribosomal protein L16"
species:7955 "Danio rerio" [GO:0019843 "rRNA binding" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR000114 InterPro:IPR016180 Pfam:PF00252 PRINTS:PR00060
ZFIN:ZDB-GENE-041122-1 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
GO:GO:0019843 PANTHER:PTHR12220 SUPFAM:SSF54686 eggNOG:COG0197
GeneTree:ENSGT00390000002038 HOGENOM:HOG000021349
HOVERGEN:HBG056553 OMA:SPYDLTH OrthoDB:EOG4K6G50 EMBL:CU571081
IPI:IPI00496548 UniGene:Dr.30833 Ensembl:ENSDART00000020327
Bgee:B8JM36 Uniprot:B8JM36
Length = 254
Score = 368 (134.6 bits), Expect = 7.4e-34, P = 7.4e-34
Identities = 72/223 (32%), Positives = 122/223 (54%)
Query: 20 TAGLKNIKKPPNYDHIVMPERPRLKFVDKVPTFIYNHKTPRTTKRLDLLRGPEEIHNYLI 79
+AG++ + PP++ + +PE+P+LKF++KVP + + KRL ++GP
Sbjct: 30 SAGMRTYEIPPDFSDVELPEKPKLKFMEKVPNL---KQAKKEMKRLRDIQGPSRTATKFS 86
Query: 80 HKQYGLVALSGGRMNYRHFETIRFAMMRKLDVKKMFAVWRVDPPWLPVTXXXXXXXXXXX 139
QYG++AL GG +++ H E +R + R +D MFAVWR PP P+T
Sbjct: 87 QGQYGILALGGGFLHWGHIEMMRLTINRSIDPSSMFAVWRFQPPHKPITRKSLGQRMGGG 146
Query: 140 XXSIDHYVTPVKTGRIIIEVGGKCSYEEVLPYLRSCASKMPFKCMPCNEDILXXXXXXXX 199
+IDHYVTP+K GR+++E+GG+ +V L+ A K+PF + + L
Sbjct: 147 KGAIDHYVTPIKCGRLVLEMGGQLELVQVEAMLKQVAKKLPFPAKVVSRESLALMYKEHA 206
Query: 200 XXARDNINPYTFEYMIKNNIGNCRQWIS---THVDYKYFGKYF 239
+N NP++F+ ++++N+ R+ +S H +Y GK+F
Sbjct: 207 ERVSNNQNPWSFQKIVRSNMLGIRKVLSPLDVHNHGRYTGKFF 249
>WB|WBGene00011412 [details] [associations]
symbol:mrpl-16 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0019843 "rRNA binding"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] InterPro:IPR000114 InterPro:IPR016180
Pfam:PF00252 EMBL:Z35663 GO:GO:0009792 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
GO:GO:0019843 PANTHER:PTHR12220 SUPFAM:SSF54686 eggNOG:NOG294174
GeneTree:ENSGT00390000002038 HOGENOM:HOG000021349 OMA:SPYDLTH
RefSeq:NP_497965.2 ProteinModelPortal:Q22140 SMR:Q22140
DIP:DIP-25722N IntAct:Q22140 MINT:MINT-1083540 STRING:Q22140
PaxDb:Q22140 EnsemblMetazoa:T04A8.11.1 EnsemblMetazoa:T04A8.11.2
EnsemblMetazoa:T04A8.11.3 GeneID:188040 KEGG:cel:CELE_T04A8.11
UCSC:T04A8.11 CTD:188040 WormBase:T04A8.11 InParanoid:Q22140
Uniprot:Q22140
Length = 240
Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
Identities = 77/233 (33%), Positives = 114/233 (48%)
Query: 11 RRPIGQIV-CTAGLKNIKKPPNYDHIVMPERPRLKFVDKVPTFIYN----HKTPRTTKRL 65
R P+ + T G+K P Y+++ P +LK Y+ K ++TKR+
Sbjct: 9 RAPVANLTQFTRGMKKYSFPVTYENVRFPPNGQLKLPVMPAEPFYDAEKGEKKYKSTKRM 68
Query: 66 DLLRGPEEIHNYLIHKQYGLVALSGGRMNYRHFETIRFAMMRKLDVKKMFAVWRVDPPWL 125
RG EE+H LIH+QYGL A+SGG ++ F+ I+ + + L + F+VWRVD PWL
Sbjct: 69 IEARGVEEVHTELIHEQYGLAAVSGGFIDSDDFKFIQDRINKNL-IDNQFSVWRVDAPWL 127
Query: 126 PVTXXXXXXXXXXXXXSIDHYVTPVKTGRIIIEVGGKCSYEEVLPYLRSCASKMPFKCMP 185
P T SI YVTPV+ RII+EVGG + E +L + F
Sbjct: 128 PRTKKAQGTRLGGGKGSIQKYVTPVRANRIILEVGGHITEIEAKAFLLYLCERFSFPVEF 187
Query: 186 CNEDILXXXXXXXXXXARDNINPYTFEYMIKNNIGNCRQWISTHVDYKYFGKY 238
+E +L N N + + +IK N+ NC W+S++ D + GKY
Sbjct: 188 VSETMLAERRKKAEEERAMNKNGFNWGKVIKYNMQNCNSWLSSY-DVAWKGKY 239
>UNIPROTKB|E9PI14 [details] [associations]
symbol:MRPL16 "39S ribosomal protein L16, mitochondrial"
species:9606 "Homo sapiens" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0019843 "rRNA binding" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR000114 InterPro:IPR016180 Pfam:PF00252 PRINTS:PR00060
GO:GO:0005739 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
GO:GO:0019843 EMBL:AP000640 PANTHER:PTHR12220 SUPFAM:SSF54686
HGNC:HGNC:14476 ChiTaRS:MRPL16 IPI:IPI00980261
ProteinModelPortal:E9PI14 SMR:E9PI14 Ensembl:ENST00000534340
ArrayExpress:E9PI14 Bgee:E9PI14 Uniprot:E9PI14
Length = 86
Score = 205 (77.2 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 36/81 (44%), Positives = 51/81 (62%)
Query: 101 IRFAMMRKLDVKKMFAVWRVDPPWLPVTXXXXXXXXXXXXXSIDHYVTPVKTGRIIIEVG 160
+R + R +D K MFA+WRV P+ P+T +IDHYVTPVK GR+++E+G
Sbjct: 2 MRLTINRSMDPKNMFAIWRVPAPFKPITRKSVGHRMGGGKGAIDHYVTPVKAGRLVVEMG 61
Query: 161 GKCSYEEVLPYLRSCASKMPF 181
G+C +EEV +L A K+PF
Sbjct: 62 GRCEFEEVQGFLDQVAHKLPF 82
>TIGR_CMR|SPO_0488 [details] [associations]
symbol:SPO_0488 "ribosomal protein L16" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0042255 "ribosome assembly" evidence=ISS] HAMAP:MF_01342
InterPro:IPR000114 InterPro:IPR016180 InterPro:IPR020798
Pfam:PF00252 PRINTS:PR00060 PROSITE:PS00586 PROSITE:PS00701
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 GO:GO:0000049 GO:GO:0019843 PANTHER:PTHR12220
SUPFAM:SSF54686 TIGRFAMs:TIGR01164 HOGENOM:HOG000164573
eggNOG:COG0197 KO:K02878 OMA:GAPEYWV ProtClustDB:PRK09203
RefSeq:YP_165750.1 ProteinModelPortal:Q5LW55 SMR:Q5LW55
GeneID:3195318 KEGG:sil:SPO0488 PATRIC:23374237 Uniprot:Q5LW55
Length = 137
Score = 116 (45.9 bits), Expect = 6.7e-07, P = 6.7e-07
Identities = 35/101 (34%), Positives = 47/101 (46%)
Query: 83 YGLVALSGGRMNYRHFETIRFAMMRKLDVKKMFAVW-RVDPPWLPVTXXXXXXXXXXXXX 141
YGL AL R+ R E R AM R + K+ VW R+ P PVT
Sbjct: 32 YGLKALEPERVTARQIEAARRAMTRHM--KRQGRVWIRIFPD-TPVTSKPTEVRMGKGKG 88
Query: 142 SIDHYVTPVKTGRIIIEVGGKCSYEEVLPYLRSCASKMPFK 182
S+D++ VK GR++ E+ G + E LR A K+P K
Sbjct: 89 SVDYWACKVKPGRVMFEIDG-VNDEIAREALRLAAMKLPIK 128
>TIGR_CMR|CPS_0866 [details] [associations]
symbol:CPS_0866 "ribosomal protein L16" species:167879
"Colwellia psychrerythraea 34H" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0015934 "large ribosomal subunit" evidence=ISS] HAMAP:MF_01342
InterPro:IPR000114 InterPro:IPR016180 InterPro:IPR020798
Pfam:PF00252 PRINTS:PR00060 PROSITE:PS00586 PROSITE:PS00701
GO:GO:0006412 GO:GO:0005840 EMBL:CP000083 GenomeReviews:CP000083_GR
GO:GO:0003735 GO:GO:0000049 GO:GO:0019843 PANTHER:PTHR12220
SUPFAM:SSF54686 TIGRFAMs:TIGR01164 HOGENOM:HOG000164573
eggNOG:COG0197 KO:K02878 OMA:GAPEYWV ProtClustDB:PRK09203
RefSeq:YP_267615.1 ProteinModelPortal:Q488A0 SMR:Q488A0
STRING:Q488A0 GeneID:3520797 KEGG:cps:CPS_0866 PATRIC:21465025
BioCyc:CPSY167879:GI48-952-MONOMER Uniprot:Q488A0
Length = 137
Score = 113 (44.8 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 35/115 (30%), Positives = 53/115 (46%)
Query: 69 RGPEEIHNYLIHKQYGLVALSGGRMNYRHFETIRFAMMRKLDVKKMFAVW-RVDPPWLPV 127
RG + + + +GL ++ GRM R E R AM R VK+ +W RV P P+
Sbjct: 18 RGLAHVGSSVSFGTFGLKSMERGRMTARQIEAARRAMTRH--VKRQGKIWIRVFPD-KPI 74
Query: 128 TXXXXXXXXXXXXXSIDHYVTPVKTGRIIIEVGGKCSYEEVLPYLRSCASKMPFK 182
T S++++V + GR++ E+ G S E ASK+PFK
Sbjct: 75 TKKPLEVRMGKGKGSVEYWVCQILPGRVLYEMEG-VSEEIAREAFALAASKLPFK 128
>TIGR_CMR|NSE_0273 [details] [associations]
symbol:NSE_0273 "ribosomal protein L16" species:222891
"Neorickettsia sennetsu str. Miyayama" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0015934 "large ribosomal subunit" evidence=ISS]
HAMAP:MF_01342 InterPro:IPR000114 InterPro:IPR016180 Pfam:PF00252
PRINTS:PR00060 PROSITE:PS00586 PROSITE:PS00701 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 GO:GO:0000049 GO:GO:0019843
EMBL:CP000237 GenomeReviews:CP000237_GR PANTHER:PTHR12220
SUPFAM:SSF54686 TIGRFAMs:TIGR01164 HOGENOM:HOG000164573
eggNOG:COG0197 KO:K02878 OMA:GAPEYWV ProtClustDB:PRK09203
RefSeq:YP_506164.1 ProteinModelPortal:Q2GED2 STRING:Q2GED2
GeneID:3932038 KEGG:nse:NSE_0273 PATRIC:22680639
BioCyc:NSEN222891:GHFU-300-MONOMER Uniprot:Q2GED2
Length = 139
Score = 111 (44.1 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 29/100 (29%), Positives = 47/100 (47%)
Query: 82 QYGLVALSGGRMNYRHFETIRFAMMRKLDVKKMFAVWRVDPPWLPVTXXXXXXXXXXXXX 141
+YGL A+ R+N R E+ R + R V K +W P +P+T
Sbjct: 31 EYGLKAIGSARLNGRQIESARRVITRI--VSKAGKLWINVFPGIPLTRKPTDVRMGGGKG 88
Query: 142 SIDHYVTPVKTGRIIIEVGGKCSYEEVLPYLRSCASKMPF 181
S+D Y+ + GR++ E+GG E+ L ++K+PF
Sbjct: 89 SVDSYIFAISPGRVLFELGG-VDREKAKLALCKASAKLPF 127
>UNIPROTKB|Q9KNZ1 [details] [associations]
symbol:rplP "50S ribosomal protein L16" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003735
"structural constituent of ribosome" evidence=ISS] [GO:0006412
"translation" evidence=ISS] HAMAP:MF_01342 InterPro:IPR000114
InterPro:IPR016180 InterPro:IPR020798 Pfam:PF00252 PRINTS:PR00060
PROSITE:PS00586 PROSITE:PS00701 GO:GO:0006412 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0005840 GO:GO:0003735 GO:GO:0000049
GO:GO:0019843 PANTHER:PTHR12220 SUPFAM:SSF54686 TIGRFAMs:TIGR01164
eggNOG:COG0197 KO:K02878 OMA:GAPEYWV ProtClustDB:PRK09203
PIR:G82058 RefSeq:NP_232217.1 ProteinModelPortal:Q9KNZ1 SMR:Q9KNZ1
DNASU:2615606 GeneID:2615606 KEGG:vch:VC2589 PATRIC:20084204
Uniprot:Q9KNZ1
Length = 136
Score = 106 (42.4 bits), Expect = 9.5e-06, P = 9.5e-06
Identities = 30/101 (29%), Positives = 48/101 (47%)
Query: 83 YGLVALSGGRMNYRHFETIRFAMMRKLDVKKMFAVW-RVDPPWLPVTXXXXXXXXXXXXX 141
+GL A+ GR+ R E R AM R +K+ +W RV P P+T
Sbjct: 31 FGLKAVGRGRLTARQIEAARRAMTRH--IKRQGKIWIRVFPD-KPITEKPLEVRQGKGKG 87
Query: 142 SIDHYVTPVKTGRIIIEVGGKCSYEEVLPYLRSCASKMPFK 182
+++++V ++ G+++ EV G E R A K+PFK
Sbjct: 88 NVEYWVAQIQPGKVMYEVDG-VPEELAREAFRLAARKLPFK 127
>TIGR_CMR|CJE_1868 [details] [associations]
symbol:CJE_1868 "ribosomal protein L16" species:195099
"Campylobacter jejuni RM1221" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0042254 "ribosome biogenesis" evidence=ISS] HAMAP:MF_01342
InterPro:IPR000114 InterPro:IPR016180 InterPro:IPR020798
Pfam:PF00252 PRINTS:PR00060 PROSITE:PS00586 PROSITE:PS00701
GO:GO:0006412 GO:GO:0005840 EMBL:CP000025 GenomeReviews:CP000025_GR
GO:GO:0003735 GO:GO:0000049 GO:GO:0019843 PANTHER:PTHR12220
SUPFAM:SSF54686 TIGRFAMs:TIGR01164 HOGENOM:HOG000164573
eggNOG:COG0197 KO:K02878 OMA:GAPEYWV ProtClustDB:PRK09203
RefSeq:YP_179838.1 ProteinModelPortal:Q5HS97 SMR:Q5HS97
STRING:Q5HS97 GeneID:3232495 KEGG:cjr:CJE1868 PATRIC:20045568
BioCyc:CJEJ195099:GJC0-1907-MONOMER Uniprot:Q5HS97
Length = 141
Score = 106 (42.4 bits), Expect = 9.5e-06, P = 9.5e-06
Identities = 33/102 (32%), Positives = 46/102 (45%)
Query: 82 QYGLVALSGGRMNYRHFETIRFAMMRKLDVKKMFAVW-RVDPPWLPVTXXXXXXXXXXXX 140
++ L A GR+N R E R A+ R VK+ W RV P P+T
Sbjct: 31 EFALKATEAGRINSRQIEAARIALTRF--VKRQGKTWIRVFPD-KPLTKKPLETRMGKGK 87
Query: 141 XSIDHYVTPVKTGRIIIEVGGKCSYEEVLPYLRSCASKMPFK 182
+++ +V +K GRII E+ G S E L K+PFK
Sbjct: 88 GAVEEWVMNIKPGRIIYEMAG-VSEEMAREALTLAMHKLPFK 128
>TIGR_CMR|VC_2589 [details] [associations]
symbol:VC_2589 "ribosomal protein L16" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
HAMAP:MF_01342 InterPro:IPR000114 InterPro:IPR016180
InterPro:IPR020798 Pfam:PF00252 PRINTS:PR00060 PROSITE:PS00586
PROSITE:PS00701 GO:GO:0006412 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0005840 GO:GO:0003735 GO:GO:0000049
GO:GO:0019843 PANTHER:PTHR12220 SUPFAM:SSF54686 TIGRFAMs:TIGR01164
eggNOG:COG0197 KO:K02878 OMA:GAPEYWV ProtClustDB:PRK09203
PIR:G82058 RefSeq:NP_232217.1 ProteinModelPortal:Q9KNZ1 SMR:Q9KNZ1
DNASU:2615606 GeneID:2615606 KEGG:vch:VC2589 PATRIC:20084204
Uniprot:Q9KNZ1
Length = 136
Score = 106 (42.4 bits), Expect = 9.5e-06, P = 9.5e-06
Identities = 30/101 (29%), Positives = 48/101 (47%)
Query: 83 YGLVALSGGRMNYRHFETIRFAMMRKLDVKKMFAVW-RVDPPWLPVTXXXXXXXXXXXXX 141
+GL A+ GR+ R E R AM R +K+ +W RV P P+T
Sbjct: 31 FGLKAVGRGRLTARQIEAARRAMTRH--IKRQGKIWIRVFPD-KPITEKPLEVRQGKGKG 87
Query: 142 SIDHYVTPVKTGRIIIEVGGKCSYEEVLPYLRSCASKMPFK 182
+++++V ++ G+++ EV G E R A K+PFK
Sbjct: 88 NVEYWVAQIQPGKVMYEVDG-VPEELAREAFRLAARKLPFK 127
>TIGR_CMR|APH_0287 [details] [associations]
symbol:APH_0287 "ribosomal protein L16" species:212042
"Anaplasma phagocytophilum HZ" [GO:0000315 "organellar large
ribosomal subunit" evidence=ISS] [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] HAMAP:MF_01342 InterPro:IPR000114 InterPro:IPR016180
InterPro:IPR020798 Pfam:PF00252 PRINTS:PR00060 PROSITE:PS00586
PROSITE:PS00701 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
EMBL:CP000235 GenomeReviews:CP000235_GR GO:GO:0000049 GO:GO:0019843
PANTHER:PTHR12220 SUPFAM:SSF54686 TIGRFAMs:TIGR01164
HOGENOM:HOG000164573 eggNOG:COG0197 KO:K02878 OMA:GAPEYWV
RefSeq:YP_504899.1 ProteinModelPortal:Q2GL52 SMR:Q2GL52
STRING:Q2GL52 GeneID:3930847 KEGG:aph:APH_0287 PATRIC:20949148
ProtClustDB:PRK09203 BioCyc:APHA212042:GHPM-317-MONOMER
Uniprot:Q2GL52
Length = 137
Score = 99 (39.9 bits), Expect = 0.00012, P = 0.00012
Identities = 33/103 (32%), Positives = 49/103 (47%)
Query: 82 QYGLVALSGGRMNYRHFETIRFAMMRKLDVKKMFAVW-RVDPPWLPVTXXXXXXXXXXXX 140
Q GL AL R+ + E+ R ++ R L +++ VW RV +PV+
Sbjct: 32 QCGLKALEPCRLTSKQIESARRSISRSL--RRVGKVWIRVFCH-VPVSKKPVDVRMGKGK 88
Query: 141 XSIDHYVTPVKTGRIIIEVGGKCSYEEVLPYLRSCASKMPFKC 183
S + +V V+ GRI+ E+GG S E R SK+P KC
Sbjct: 89 GSTEMWVCKVQPGRILFEIGG-VSVELAREAFRKAQSKLPIKC 130
>UNIPROTKB|P0ADY7 [details] [associations]
symbol:rplP "50S ribosomal subunit protein L16"
species:83333 "Escherichia coli K-12" [GO:0006412 "translation"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0019843 "rRNA
binding" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000049 "tRNA binding"
evidence=IEA] HAMAP:MF_01342 InterPro:IPR000114 InterPro:IPR016180
InterPro:IPR020798 Pfam:PF00252 PRINTS:PR00060 PROSITE:PS00586
PROSITE:PS00701 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006412 EMBL:U18997 GO:GO:0005840
GO:GO:0003735 GO:GO:0000049 GO:GO:0019843 PDB:2VHM PDBsum:2VHM
PDB:2RDO PDBsum:2RDO PANTHER:PTHR12220 SUPFAM:SSF54686
TIGRFAMs:TIGR01164 HOGENOM:HOG000164573 eggNOG:COG0197 KO:K02878
OMA:GAPEYWV PDB:3J0T PDB:3J0W PDB:3J0Y PDB:3J11 PDB:3J12 PDB:3J14
PDB:3SGF PDB:3UOS PDBsum:3J0T PDBsum:3J0W PDBsum:3J0Y PDBsum:3J11
PDBsum:3J12 PDBsum:3J14 PDBsum:3SGF PDBsum:3UOS PDB:1P85 PDB:1P86
PDB:1VS6 PDB:1VS8 PDB:1VT2 PDB:2AW4 PDB:2AWB PDB:2GYA PDB:2GYC
PDB:2I2T PDB:2I2V PDB:2J28 PDB:2QAM PDB:2QAO PDB:2QBA PDB:2QBC
PDB:2QBE PDB:2QBG PDB:2QBI PDB:2QBK PDB:2QOV PDB:2QOX PDB:2QOZ
PDB:2QP1 PDB:2VHN PDB:2WWQ PDB:2Z4L PDB:2Z4N PDB:3E1B PDB:3E1D
PDB:3FIK PDB:3I1N PDB:3I1P PDB:3I1R PDB:3I1T PDB:3I20 PDB:3I22
PDB:3IZT PDB:3IZU PDB:3J01 PDB:3J19 PDB:3KCR PDB:3OAS PDB:3OAT
PDB:3OFC PDB:3OFD PDB:3OFQ PDB:3OFR PDB:3OFZ PDB:3OG0 PDB:3ORB
PDB:3R8S PDB:3R8T PDB:4GAR PDB:4GAU PDBsum:1P85 PDBsum:1P86
PDBsum:1VS6 PDBsum:1VS8 PDBsum:1VT2 PDBsum:2AW4 PDBsum:2AWB
PDBsum:2GYA PDBsum:2GYC PDBsum:2I2T PDBsum:2I2V PDBsum:2J28
PDBsum:2QAM PDBsum:2QAO PDBsum:2QBA PDBsum:2QBC PDBsum:2QBE
PDBsum:2QBG PDBsum:2QBI PDBsum:2QBK PDBsum:2QOV PDBsum:2QOX
PDBsum:2QOZ PDBsum:2QP1 PDBsum:2VHN PDBsum:2WWQ PDBsum:2Z4L
PDBsum:2Z4N PDBsum:3E1B PDBsum:3E1D PDBsum:3FIK PDBsum:3I1N
PDBsum:3I1P PDBsum:3I1R PDBsum:3I1T PDBsum:3I20 PDBsum:3I22
PDBsum:3IZT PDBsum:3IZU PDBsum:3J01 PDBsum:3J19 PDBsum:3KCR
PDBsum:3OAS PDBsum:3OAT PDBsum:3OFC PDBsum:3OFD PDBsum:3OFQ
PDBsum:3OFR PDBsum:3OFZ PDBsum:3OG0 PDBsum:3ORB PDBsum:3R8S
PDBsum:3R8T PDBsum:4GAR PDBsum:4GAU PDB:3BBX PDBsum:3BBX
ProtClustDB:PRK09203 EMBL:X02613 EMBL:M12490 PIR:I23129
RefSeq:NP_417772.1 RefSeq:YP_492119.1 ProteinModelPortal:P0ADY7
SMR:P0ADY7 DIP:DIP-35976N IntAct:P0ADY7 MINT:MINT-1302401
PhosSite:P0810431 PaxDb:P0ADY7 PRIDE:P0ADY7
EnsemblBacteria:EBESCT00000004645 EnsemblBacteria:EBESCT00000016687
GeneID:12934115 GeneID:947806 KEGG:ecj:Y75_p3863 KEGG:eco:b3313
PATRIC:32122058 EchoBASE:EB0870 EcoGene:EG10877
BioCyc:EcoCyc:EG10877-MONOMER BioCyc:ECOL316407:JW3275-MONOMER
EvolutionaryTrace:P0ADY7 Genevestigator:P0ADY7 Uniprot:P0ADY7
Length = 136
Score = 97 (39.2 bits), Expect = 0.00040, P = 0.00040
Identities = 28/101 (27%), Positives = 48/101 (47%)
Query: 83 YGLVALSGGRMNYRHFETIRFAMMRKLDVKKMFAVW-RVDPPWLPVTXXXXXXXXXXXXX 141
+GL A+ GR+ R E R AM R VK+ +W RV P P+T
Sbjct: 31 FGLKAVGRGRLTARQIEAARRAMTRA--VKRQGKIWIRVFPD-KPITEKPLAVRMGKGKG 87
Query: 142 SIDHYVTPVKTGRIIIEVGGKCSYEEVLPYLRSCASKMPFK 182
+++++V ++ G+++ E+ G E + A+K+P K
Sbjct: 88 NVEYWVALIQPGKVLYEMDG-VPEELAREAFKLAAAKLPIK 127
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.325 0.142 0.460 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 240 217 0.00090 112 3 11 22 0.46 32
32 0.39 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 21
No. of states in DFA: 612 (65 KB)
Total size of DFA: 204 KB (2114 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 18.29u 0.11s 18.40t Elapsed: 00:00:02
Total cpu time: 18.29u 0.11s 18.40t Elapsed: 00:00:02
Start: Thu Aug 15 11:35:24 2013 End: Thu Aug 15 11:35:26 2013