BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6081
(226 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|328697664|ref|XP_003240404.1| PREDICTED: 5'-3' exoribonuclease 2 homolog [Acyrthosiphon pisum]
Length = 958
Score = 316 bits (810), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 149/194 (76%), Positives = 162/194 (83%), Gaps = 19/194 (9%)
Query: 33 EVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDR 92
+VNG++IP DS+ PNPNG+EFDNLYLDMNGIIHPCTHPE+KPAPKDEDEMMVAIFECIDR
Sbjct: 28 DVNGEQIPIDSTSPNPNGIEFDNLYLDMNGIIHPCTHPENKPAPKDEDEMMVAIFECIDR 87
Query: 93 LFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEK 152
LFRIVRPRK+LYMAIDGVAPRAKMNQ RSRRFRASKET EK
Sbjct: 88 LFRIVRPRKVLYMAIDGVAPRAKMNQ-------------------QRSRRFRASKETTEK 128
Query: 153 IAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPG 212
E+AR+R+ L+ G ILPPEK+KG HFDSNCITPGTPFM LSACLHYY+HDRLNNDPG
Sbjct: 129 TEELARVRKNLIEAGAILPPEKQKGEHFDSNCITPGTPFMDKLSACLHYYVHDRLNNDPG 188
Query: 213 WKGIKVILSDANVP 226
WKGIKVILSDANVP
Sbjct: 189 WKGIKVILSDANVP 202
>gi|357615796|gb|EHJ69836.1| hypothetical protein KGM_03375 [Danaus plexippus]
Length = 699
Score = 303 bits (776), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 149/196 (76%), Positives = 157/196 (80%), Gaps = 19/196 (9%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
P +V+GQ I DSS PNPNG+EFDNLYLDMNGIIHPCTHPEDKP PKDEDEMMVAIFECI
Sbjct: 26 PTDVDGQLIYADSSLPNPNGIEFDNLYLDMNGIIHPCTHPEDKPPPKDEDEMMVAIFECI 85
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
DRLFRIVRPRKLLYMAIDGVAPRAKMNQ RSRRFRASKET
Sbjct: 86 DRLFRIVRPRKLLYMAIDGVAPRAKMNQ-------------------QRSRRFRASKETQ 126
Query: 151 EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
EKI E+ARIR +L G LPPE+ K +HFDSNCITPGTPFM LS CLHYYIHDRLNND
Sbjct: 127 EKIDEIARIRNELQVKGAYLPPERPKEAHFDSNCITPGTPFMDRLSKCLHYYIHDRLNND 186
Query: 211 PGWKGIKVILSDANVP 226
PGWKG+KVILSDANVP
Sbjct: 187 PGWKGVKVILSDANVP 202
>gi|194862714|ref|XP_001970086.1| GG10442 [Drosophila erecta]
gi|190661953|gb|EDV59145.1| GG10442 [Drosophila erecta]
Length = 902
Score = 298 bits (762), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 143/191 (74%), Positives = 156/191 (81%), Gaps = 19/191 (9%)
Query: 36 GQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFR 95
G+ I D++ PNPNG+EFDNLYLDMNGIIHPCTHPEDKPAPK+EDEMMVAIF+CIDRLF
Sbjct: 32 GRNIYEDATLPNPNGIEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIFDCIDRLFG 91
Query: 96 IVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAE 155
IVRPRKLLYMAIDGVAPRAKMNQ RSRRFRA+KET EK E
Sbjct: 92 IVRPRKLLYMAIDGVAPRAKMNQ-------------------QRSRRFRAAKETTEKRLE 132
Query: 156 VARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKG 215
+ARIRE+LL+ GC LPPEKEKG HFDSNCITPGTPFM LS CLHY++HDRLNN+P WKG
Sbjct: 133 IARIREELLSRGCKLPPEKEKGEHFDSNCITPGTPFMDRLSKCLHYFVHDRLNNNPAWKG 192
Query: 216 IKVILSDANVP 226
IKVILSDANVP
Sbjct: 193 IKVILSDANVP 203
>gi|383854346|ref|XP_003702682.1| PREDICTED: 5'-3' exoribonuclease 2 homolog [Megachile rotundata]
Length = 944
Score = 297 bits (761), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 145/196 (73%), Positives = 154/196 (78%), Gaps = 19/196 (9%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
P NG ++P +S+ PNPNG+EFDNLYLDMNGIIHPCTHPEDKPAPK+EDEMM AIFECI
Sbjct: 26 PITTNGVRVPVNSADPNPNGVEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMEAIFECI 85
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
DRLFRIVRPRKLLYMAIDGVAPRAKMNQ RSRRFRASKET
Sbjct: 86 DRLFRIVRPRKLLYMAIDGVAPRAKMNQ-------------------QRSRRFRASKETN 126
Query: 151 EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
EKI E+ RIR +L G LPPEK K HFDSNCITPGTPFMA LS CLHYYIHDRLNND
Sbjct: 127 EKINEIQRIRSELTLKGASLPPEKPKEEHFDSNCITPGTPFMARLSKCLHYYIHDRLNND 186
Query: 211 PGWKGIKVILSDANVP 226
PGW+ IKVILSDANVP
Sbjct: 187 PGWRNIKVILSDANVP 202
>gi|195338777|ref|XP_002036000.1| GM16241 [Drosophila sechellia]
gi|194129880|gb|EDW51923.1| GM16241 [Drosophila sechellia]
Length = 464
Score = 297 bits (760), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 145/191 (75%), Positives = 156/191 (81%), Gaps = 19/191 (9%)
Query: 36 GQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFR 95
G+ I D++ PNPNG+EFDNLYLDMNGIIHPCTHPEDKPAPK+EDEMMVAIFECIDRLF
Sbjct: 32 GRNIYEDATLPNPNGIEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIFECIDRLFG 91
Query: 96 IVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAE 155
IVRPRKLLYMAIDGVAPRAKMNQ RSRRFRA+KET EK E
Sbjct: 92 IVRPRKLLYMAIDGVAPRAKMNQ-------------------QRSRRFRAAKETTEKRLE 132
Query: 156 VARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKG 215
VARIRE+LL+ GC LPPEKEKG HFDSNCITPGTPFM LS CLHY++HDRLNN+P WKG
Sbjct: 133 VARIREELLSRGCKLPPEKEKGDHFDSNCITPGTPFMDRLSKCLHYFVHDRLNNNPAWKG 192
Query: 216 IKVILSDANVP 226
IKVILSDANVP
Sbjct: 193 IKVILSDANVP 203
>gi|195471641|ref|XP_002088111.1| GE14198 [Drosophila yakuba]
gi|194174212|gb|EDW87823.1| GE14198 [Drosophila yakuba]
Length = 897
Score = 296 bits (757), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 142/191 (74%), Positives = 156/191 (81%), Gaps = 19/191 (9%)
Query: 36 GQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFR 95
G+ I D++ PNPNG+EFDNLYLDMNGIIHPCTHPEDKPAPK+EDEMMVAIF+CIDRLF
Sbjct: 32 GRNIYEDATLPNPNGIEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIFDCIDRLFG 91
Query: 96 IVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAE 155
IVRPRKLLYMAIDGVAPRAKMNQ RSRRFRA+KET EK E
Sbjct: 92 IVRPRKLLYMAIDGVAPRAKMNQ-------------------QRSRRFRAAKETTEKRLE 132
Query: 156 VARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKG 215
+ARIRE+L++ GC LPPEKEKG HFDSNCITPGTPFM LS CLHY++HDRLNN+P WKG
Sbjct: 133 IARIREELMSRGCKLPPEKEKGEHFDSNCITPGTPFMDRLSKCLHYFVHDRLNNNPAWKG 192
Query: 216 IKVILSDANVP 226
IKVILSDANVP
Sbjct: 193 IKVILSDANVP 203
>gi|195438180|ref|XP_002067015.1| GK24252 [Drosophila willistoni]
gi|194163100|gb|EDW78001.1| GK24252 [Drosophila willistoni]
Length = 924
Score = 296 bits (757), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 141/185 (76%), Positives = 152/185 (82%), Gaps = 19/185 (10%)
Query: 42 DSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRK 101
DS+ PNPNG+EFDNLYLDMNGIIHPCTHPEDKPAPK+EDEMMVAIFECIDRLF IVRPRK
Sbjct: 38 DSTLPNPNGLEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIFECIDRLFGIVRPRK 97
Query: 102 LLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIRE 161
+LYMAIDGVAPRAKMNQ RSRRFRA+KET EK AE+ RIRE
Sbjct: 98 VLYMAIDGVAPRAKMNQ-------------------QRSRRFRAAKETIEKRAEIERIRE 138
Query: 162 KLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILS 221
+L+ GC LPPEKEKG HFDSNCITPGTPFM LS CLHYY+HDRLNN+P WKG+KVILS
Sbjct: 139 ELMTKGCKLPPEKEKGEHFDSNCITPGTPFMDRLSKCLHYYVHDRLNNNPAWKGVKVILS 198
Query: 222 DANVP 226
DANVP
Sbjct: 199 DANVP 203
>gi|20129299|ref|NP_609082.1| Rat1, isoform A [Drosophila melanogaster]
gi|442626452|ref|NP_001260166.1| Rat1, isoform B [Drosophila melanogaster]
gi|74869864|sp|Q9VM71.2|XRN2_DROME RecName: Full=5'-3' exoribonuclease 2 homolog; AltName:
Full=Ribonucleic acid-trafficking protein 1; Short=dRAT1
gi|10728625|gb|AAF52452.2| Rat1, isoform A [Drosophila melanogaster]
gi|219990665|gb|ACL68706.1| FI04660p [Drosophila melanogaster]
gi|440213467|gb|AGB92702.1| Rat1, isoform B [Drosophila melanogaster]
Length = 908
Score = 295 bits (756), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 143/191 (74%), Positives = 154/191 (80%), Gaps = 19/191 (9%)
Query: 36 GQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFR 95
G+ I D + PNPNG+EFDNLYLDMNGIIHPCTHPEDKPAPK+EDEMMVAIFECIDRLF
Sbjct: 32 GRNIYEDPTLPNPNGIEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIFECIDRLFG 91
Query: 96 IVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAE 155
IVRPRKLLYMAIDGVAPRAKMNQ RSRRFRA+KET EK E
Sbjct: 92 IVRPRKLLYMAIDGVAPRAKMNQ-------------------QRSRRFRAAKETTEKRLE 132
Query: 156 VARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKG 215
+ARIRE+LL+ GC LPPEKEKG HFDSNCITPGTPFM LS CLHY++HDR NN+P WKG
Sbjct: 133 IARIREELLSRGCKLPPEKEKGEHFDSNCITPGTPFMDRLSKCLHYFVHDRQNNNPAWKG 192
Query: 216 IKVILSDANVP 226
IKVILSDANVP
Sbjct: 193 IKVILSDANVP 203
>gi|194760286|ref|XP_001962372.1| GF15434 [Drosophila ananassae]
gi|190616069|gb|EDV31593.1| GF15434 [Drosophila ananassae]
Length = 911
Score = 295 bits (755), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 141/191 (73%), Positives = 156/191 (81%), Gaps = 19/191 (9%)
Query: 36 GQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFR 95
G+ I D++ PNPNG+EFDNLYLDMNGIIHPCTHPEDKPAPK+EDEMMVAIF+CIDRLF
Sbjct: 32 GRNIYEDATLPNPNGVEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIFDCIDRLFG 91
Query: 96 IVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAE 155
IVRPRKLLYMAIDGVAPRAKMNQ RSRRFRA+KET EK E
Sbjct: 92 IVRPRKLLYMAIDGVAPRAKMNQ-------------------QRSRRFRAAKETTEKRLE 132
Query: 156 VARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKG 215
+AR+RE+L++ GC LPPEKEKG HFDSNCITPGTPFM LS CLHYY+HDRLNN+P WKG
Sbjct: 133 IARLREELMSRGCKLPPEKEKGEHFDSNCITPGTPFMDRLSKCLHYYVHDRLNNNPAWKG 192
Query: 216 IKVILSDANVP 226
+KVILSDANVP
Sbjct: 193 VKVILSDANVP 203
>gi|340714666|ref|XP_003395847.1| PREDICTED: 5'-3' exoribonuclease 2 homolog [Bombus terrestris]
Length = 946
Score = 295 bits (754), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 143/196 (72%), Positives = 154/196 (78%), Gaps = 19/196 (9%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
P NG ++P +S PNPNG+EFDNLYLDMNGIIHPCTHPEDKPAPK+E+EMM AIFECI
Sbjct: 26 PITTNGVRVPVNSVDPNPNGIEFDNLYLDMNGIIHPCTHPEDKPAPKNEEEMMEAIFECI 85
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
DRLFRIVRPRKLLYMAIDGVAPRAKMNQ RSRRFRASKET
Sbjct: 86 DRLFRIVRPRKLLYMAIDGVAPRAKMNQ-------------------QRSRRFRASKETI 126
Query: 151 EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
EK+ E+ RIR +L+ G LPPEK K HFDSNCITPGTPFMA LS CLHYYIHDRLNND
Sbjct: 127 EKVNEIKRIRSELILKGVSLPPEKPKEDHFDSNCITPGTPFMARLSKCLHYYIHDRLNND 186
Query: 211 PGWKGIKVILSDANVP 226
PGW+ IKVILSDANVP
Sbjct: 187 PGWRNIKVILSDANVP 202
>gi|322801233|gb|EFZ21920.1| hypothetical protein SINV_00544 [Solenopsis invicta]
Length = 809
Score = 295 bits (754), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 145/196 (73%), Positives = 155/196 (79%), Gaps = 19/196 (9%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
P +G IP +S+ PNPNG+EFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMM AIFECI
Sbjct: 26 PISADGTCIPVNSADPNPNGVEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMEAIFECI 85
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
DRLFRIVRPRKLLYMAIDGVAPRAKMNQ RSRRFRASKET
Sbjct: 86 DRLFRIVRPRKLLYMAIDGVAPRAKMNQ-------------------QRSRRFRASKETM 126
Query: 151 EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
EKI E+ RIR +L G LPPEK K +HFDSNCITPGTPFMA LSACLHYYIH+RLNND
Sbjct: 127 EKIDEIERIRSELTLKGASLPPEKPKEAHFDSNCITPGTPFMARLSACLHYYIHERLNND 186
Query: 211 PGWKGIKVILSDANVP 226
PGW+ I+VILSDANVP
Sbjct: 187 PGWRNIQVILSDANVP 202
>gi|307204797|gb|EFN83355.1| 5'-3' exoribonuclease 2-like protein [Harpegnathos saltator]
Length = 880
Score = 294 bits (753), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 144/196 (73%), Positives = 155/196 (79%), Gaps = 19/196 (9%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
P +G IP +S+ PNPNG+EFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMM AIFECI
Sbjct: 26 PVNADGVCIPVNSADPNPNGVEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMEAIFECI 85
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
DRLFRIVRPRKLLYMAIDGVAPRAKMNQ RSRRFRASKET
Sbjct: 86 DRLFRIVRPRKLLYMAIDGVAPRAKMNQ-------------------QRSRRFRASKETT 126
Query: 151 EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
EKI E+ RIR +L G LPPEK K +HFDSNCITPGTPFM+ LSACLHYYIH+RLNND
Sbjct: 127 EKIDEIQRIRTELSLKGASLPPEKPKEAHFDSNCITPGTPFMSRLSACLHYYIHERLNND 186
Query: 211 PGWKGIKVILSDANVP 226
PGW+ IK+ILSDANVP
Sbjct: 187 PGWRNIKIILSDANVP 202
>gi|198471914|ref|XP_001355769.2| GA10268 [Drosophila pseudoobscura pseudoobscura]
gi|198139522|gb|EAL32828.2| GA10268 [Drosophila pseudoobscura pseudoobscura]
Length = 916
Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 142/191 (74%), Positives = 154/191 (80%), Gaps = 19/191 (9%)
Query: 36 GQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFR 95
G+ I D++ PNPNG+EFDNLYLDMNGIIHPCTHPEDKPAPK+EDEMMVAIF+CIDRLF
Sbjct: 32 GKNIYEDATLPNPNGVEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIFDCIDRLFG 91
Query: 96 IVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAE 155
IVRPRK+LYMAIDGVAPRAKMNQ RSRRFRA+KET EK E
Sbjct: 92 IVRPRKVLYMAIDGVAPRAKMNQ-------------------QRSRRFRAAKETTEKRME 132
Query: 156 VARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKG 215
+ARIRE+LL GC LPPEKEKG HFDSNCITPGTPFM LS CLHYY+HDR NN+P WKG
Sbjct: 133 IARIREELLTRGCKLPPEKEKGEHFDSNCITPGTPFMDRLSKCLHYYVHDRQNNNPAWKG 192
Query: 216 IKVILSDANVP 226
IKVILSDANVP
Sbjct: 193 IKVILSDANVP 203
>gi|332021133|gb|EGI61520.1| 5'-3' exoribonuclease 2-like protein [Acromyrmex echinatior]
Length = 867
Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 148/214 (69%), Positives = 163/214 (76%), Gaps = 22/214 (10%)
Query: 16 RQDSKPYSFASLVSLPQEV---NGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPED 72
R S+ Y + + Q+V +G IP +S++PNPNG+EFDNLYLDMNGIIHPCTHPED
Sbjct: 8 RWLSRKYPSVIVECIEQKVVSADGVCIPVNSAEPNPNGVEFDNLYLDMNGIIHPCTHPED 67
Query: 73 KPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNY 132
KPAPKDEDEMM AIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQ
Sbjct: 68 KPAPKDEDEMMEAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQ-------------- 113
Query: 133 STWQLMRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFM 192
RSRRFRA+KE+ EKI E+ RIR +L G LPPEK K HFDSNCITPGTPFM
Sbjct: 114 -----QRSRRFRAAKESTEKINEIERIRSELTLKGASLPPEKSKEEHFDSNCITPGTPFM 168
Query: 193 ACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
A LS+CLHYYIHDRLNNDPGW+ IKVILSDANVP
Sbjct: 169 ARLSSCLHYYIHDRLNNDPGWRNIKVILSDANVP 202
>gi|60677951|gb|AAX33482.1| RE02462p [Drosophila melanogaster]
Length = 519
Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 143/191 (74%), Positives = 154/191 (80%), Gaps = 19/191 (9%)
Query: 36 GQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFR 95
G+ I D + PNPNG+EFDNLYLDMNGIIHPCTHPEDKPAPK+EDEMMVAIFECIDRLF
Sbjct: 32 GRNIYEDPTLPNPNGIEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIFECIDRLFG 91
Query: 96 IVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAE 155
IVRPRKLLYMAIDGVAPRAKMNQ RSRRFRA+KET EK E
Sbjct: 92 IVRPRKLLYMAIDGVAPRAKMNQ-------------------QRSRRFRAAKETTEKRLE 132
Query: 156 VARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKG 215
+ARIRE+LL+ GC LPPEKEKG HFDSNCITPGTPFM LS CLHY++HDR NN+P WKG
Sbjct: 133 IARIREELLSRGCKLPPEKEKGEHFDSNCITPGTPFMDRLSKCLHYFVHDRQNNNPAWKG 192
Query: 216 IKVILSDANVP 226
IKVILSDANVP
Sbjct: 193 IKVILSDANVP 203
>gi|350410980|ref|XP_003489200.1| PREDICTED: 5'-3' exoribonuclease 2 homolog [Bombus impatiens]
Length = 947
Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 142/196 (72%), Positives = 154/196 (78%), Gaps = 19/196 (9%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
P NG ++P +S+ PNPNG+EFDNLYLDMNGIIHPCTHPEDKPAPK+E+EMM AIFECI
Sbjct: 26 PITTNGVRVPVNSADPNPNGIEFDNLYLDMNGIIHPCTHPEDKPAPKNEEEMMEAIFECI 85
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
DRLFRIVRPRKLLYMAIDGVAPRAKMNQ RSRRFRASKE +
Sbjct: 86 DRLFRIVRPRKLLYMAIDGVAPRAKMNQ-------------------QRSRRFRASKEAS 126
Query: 151 EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
EK+ E+ RIR +L G LPPEK K HFDSNCITPGTPFMA LS CLHYYIHDRLNND
Sbjct: 127 EKVNEIKRIRSELTLKGASLPPEKPKEDHFDSNCITPGTPFMARLSQCLHYYIHDRLNND 186
Query: 211 PGWKGIKVILSDANVP 226
PGW+ IKVILSDANVP
Sbjct: 187 PGWRNIKVILSDANVP 202
>gi|380025877|ref|XP_003696690.1| PREDICTED: 5'-3' exoribonuclease 2 homolog [Apis florea]
Length = 948
Score = 293 bits (751), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 142/196 (72%), Positives = 155/196 (79%), Gaps = 19/196 (9%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
P NG ++P +S++PNPNG+EFDNLYLDMNGIIHPCTHPED+PAP++EDEMM AIFECI
Sbjct: 26 PITTNGIRVPVNSAEPNPNGIEFDNLYLDMNGIIHPCTHPEDRPAPQNEDEMMEAIFECI 85
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
DRLFRIVRPRKLLYMAIDGVAPRAKMNQ RSRRFRASKE +
Sbjct: 86 DRLFRIVRPRKLLYMAIDGVAPRAKMNQ-------------------QRSRRFRASKEAS 126
Query: 151 EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
EKI E+ RIR +L G LPPEK K HFDSNCITPGTPFMA LS CLHYYIHDRLNND
Sbjct: 127 EKINEIKRIRSELSLKGASLPPEKPKEEHFDSNCITPGTPFMARLSKCLHYYIHDRLNND 186
Query: 211 PGWKGIKVILSDANVP 226
PGW+ IKVILSDANVP
Sbjct: 187 PGWRNIKVILSDANVP 202
>gi|270010451|gb|EFA06899.1| hypothetical protein TcasGA2_TC009846 [Tribolium castaneum]
Length = 975
Score = 293 bits (750), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 141/194 (72%), Positives = 157/194 (80%), Gaps = 19/194 (9%)
Query: 33 EVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDR 92
+VNG ++P +S++PNPNG+EFDNLYLDMNGIIHPCTHPED+PAP++EDEMMVAIFECIDR
Sbjct: 28 DVNGVRVPTNSAEPNPNGVEFDNLYLDMNGIIHPCTHPEDRPAPRNEDEMMVAIFECIDR 87
Query: 93 LFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEK 152
+F IVRPRKLLYMAIDGVAPRAKMNQ RSRRFRA+KET EK
Sbjct: 88 IFNIVRPRKLLYMAIDGVAPRAKMNQ-------------------QRSRRFRAAKETVEK 128
Query: 153 IAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPG 212
I E+ RIR +LL G LP EK K HFDSNCITPGTPFMA LS CLHYYIH+RLNNDPG
Sbjct: 129 INEIKRIRAELLLRGAKLPDEKPKEEHFDSNCITPGTPFMARLSNCLHYYIHERLNNDPG 188
Query: 213 WKGIKVILSDANVP 226
W+GIKVILSDANVP
Sbjct: 189 WQGIKVILSDANVP 202
>gi|328788352|ref|XP_392371.3| PREDICTED: 5'-3' exoribonuclease 2 homolog [Apis mellifera]
Length = 948
Score = 292 bits (748), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 142/196 (72%), Positives = 154/196 (78%), Gaps = 19/196 (9%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
P NG ++P +S++PNPNG+EFDNLYLDMNGIIHPCTHPED+PAP++EDEMM AIFECI
Sbjct: 26 PITTNGIRVPVNSAEPNPNGIEFDNLYLDMNGIIHPCTHPEDRPAPQNEDEMMEAIFECI 85
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
DRLFRIVRPRKLLYMAIDGVAPRAKMNQ RSRRFRASKE
Sbjct: 86 DRLFRIVRPRKLLYMAIDGVAPRAKMNQ-------------------QRSRRFRASKEAN 126
Query: 151 EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
EKI E+ RIR +L G LPPEK K HFDSNCITPGTPFMA LS CLHYYIHDRLNND
Sbjct: 127 EKINEIKRIRSELSLKGASLPPEKPKEEHFDSNCITPGTPFMARLSKCLHYYIHDRLNND 186
Query: 211 PGWKGIKVILSDANVP 226
PGW+ IKVILSDANVP
Sbjct: 187 PGWRNIKVILSDANVP 202
>gi|189239340|ref|XP_973739.2| PREDICTED: similar to CG10354 CG10354-PA [Tribolium castaneum]
Length = 867
Score = 292 bits (747), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 141/194 (72%), Positives = 157/194 (80%), Gaps = 19/194 (9%)
Query: 33 EVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDR 92
+VNG ++P +S++PNPNG+EFDNLYLDMNGIIHPCTHPED+PAP++EDEMMVAIFECIDR
Sbjct: 28 DVNGVRVPTNSAEPNPNGVEFDNLYLDMNGIIHPCTHPEDRPAPRNEDEMMVAIFECIDR 87
Query: 93 LFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEK 152
+F IVRPRKLLYMAIDGVAPRAKMNQ RSRRFRA+KET EK
Sbjct: 88 IFNIVRPRKLLYMAIDGVAPRAKMNQ-------------------QRSRRFRAAKETVEK 128
Query: 153 IAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPG 212
I E+ RIR +LL G LP EK K HFDSNCITPGTPFMA LS CLHYYIH+RLNNDPG
Sbjct: 129 INEIKRIRAELLLRGAKLPDEKPKEEHFDSNCITPGTPFMARLSNCLHYYIHERLNNDPG 188
Query: 213 WKGIKVILSDANVP 226
W+GIKVILSDANVP
Sbjct: 189 WQGIKVILSDANVP 202
>gi|195038968|ref|XP_001990842.1| GH18033 [Drosophila grimshawi]
gi|193895038|gb|EDV93904.1| GH18033 [Drosophila grimshawi]
Length = 873
Score = 291 bits (744), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 139/191 (72%), Positives = 153/191 (80%), Gaps = 19/191 (9%)
Query: 36 GQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFR 95
G+ I D++ PNPNG+EFDNLYLDMNGIIHPCTHPEDKPAPK+E+EMM+AIFECIDRLF
Sbjct: 32 GKNIYEDATLPNPNGVEFDNLYLDMNGIIHPCTHPEDKPAPKNEEEMMIAIFECIDRLFG 91
Query: 96 IVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAE 155
IVRPRKLLYMAIDGVAPRAKMNQ RSRRFRA+KE EK E
Sbjct: 92 IVRPRKLLYMAIDGVAPRAKMNQ-------------------QRSRRFRAAKEATEKRLE 132
Query: 156 VARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKG 215
+ RIR++LL GC LPPEKEKG HFDSNCITPGTPFM LS CLHYYIHDRLNN+P WKG
Sbjct: 133 IERIRDELLTRGCKLPPEKEKGEHFDSNCITPGTPFMDRLSKCLHYYIHDRLNNNPAWKG 192
Query: 216 IKVILSDANVP 226
+K+ILSDANVP
Sbjct: 193 VKIILSDANVP 203
>gi|307183882|gb|EFN70493.1| 5'-3' exoribonuclease 2-like protein [Camponotus floridanus]
Length = 630
Score = 291 bits (744), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 144/193 (74%), Positives = 152/193 (78%), Gaps = 19/193 (9%)
Query: 34 VNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRL 93
+G IP +S+ PNPNG+EFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMM AIFECIDRL
Sbjct: 29 ADGVCIPVNSADPNPNGVEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMEAIFECIDRL 88
Query: 94 FRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKI 153
FRIVRPRKLLYMAIDGVAPRAKMNQ RSRRFRASKET EKI
Sbjct: 89 FRIVRPRKLLYMAIDGVAPRAKMNQ-------------------QRSRRFRASKETTEKI 129
Query: 154 AEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGW 213
E+ RIR +L G LPPEK K HFDSNCITPGTPFMA LSACLHYYIH+RLN DPGW
Sbjct: 130 NEIQRIRSELANKGAPLPPEKPKEEHFDSNCITPGTPFMARLSACLHYYIHERLNKDPGW 189
Query: 214 KGIKVILSDANVP 226
+ IKVILSDANVP
Sbjct: 190 RNIKVILSDANVP 202
>gi|195388580|ref|XP_002052957.1| GJ23613 [Drosophila virilis]
gi|194151043|gb|EDW66477.1| GJ23613 [Drosophila virilis]
Length = 774
Score = 290 bits (743), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 142/191 (74%), Positives = 153/191 (80%), Gaps = 19/191 (9%)
Query: 36 GQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFR 95
G+ I DS+ PNPNG+EFDNLYLDMNGIIHPCTHPEDKPAPK+E+EMMVAIF+CIDRLF
Sbjct: 32 GKTIFEDSTLPNPNGVEFDNLYLDMNGIIHPCTHPEDKPAPKNEEEMMVAIFDCIDRLFG 91
Query: 96 IVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAE 155
IVRPRKLLYMAIDGVAPRAKMNQ RSRRFRA+KET EK E
Sbjct: 92 IVRPRKLLYMAIDGVAPRAKMNQ-------------------QRSRRFRAAKETIEKRLE 132
Query: 156 VARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKG 215
+ RIR +LL GC LPPEKEKG HFDSNCITPGTPFM LS CLHYYIHDRLNN+P WKG
Sbjct: 133 IERIRNELLTRGCKLPPEKEKGEHFDSNCITPGTPFMDRLSKCLHYYIHDRLNNNPAWKG 192
Query: 216 IKVILSDANVP 226
I+VILSDANVP
Sbjct: 193 IQVILSDANVP 203
>gi|347971217|ref|XP_309641.5| AGAP004090-PA [Anopheles gambiae str. PEST]
gi|333466642|gb|EAA05380.5| AGAP004090-PA [Anopheles gambiae str. PEST]
Length = 1042
Score = 290 bits (741), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 140/183 (76%), Positives = 150/183 (81%), Gaps = 19/183 (10%)
Query: 44 SKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLL 103
S PNPN +EFDNLYLDMNGIIHPCTHPEDKPAPK+EDEMM+AIFECIDRL IVRPRK+L
Sbjct: 39 SDPNPNRVEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMIAIFECIDRLMNIVRPRKVL 98
Query: 104 YMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKL 163
YMAIDGVAPRAKMNQ RSRRFRASKETAEK AE+ARIRE+L
Sbjct: 99 YMAIDGVAPRAKMNQ-------------------QRSRRFRASKETAEKAAEMARIREEL 139
Query: 164 LADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDA 223
A G ILPPEKEKGSHFDSNCITPGTPFM LS CL YY+HDR+NN+PGWK +KVILSDA
Sbjct: 140 AAKGAILPPEKEKGSHFDSNCITPGTPFMDRLSRCLQYYVHDRMNNNPGWKNLKVILSDA 199
Query: 224 NVP 226
NVP
Sbjct: 200 NVP 202
>gi|170058238|ref|XP_001864833.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167877413|gb|EDS40796.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 884
Score = 289 bits (740), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 139/192 (72%), Positives = 155/192 (80%), Gaps = 19/192 (9%)
Query: 35 NGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLF 94
+G + D +KPNPN +EFDNLYLDMNGIIHPCTHPEDKPAP++EDEMMVAIFECIDRL
Sbjct: 30 DGNVLYDDMTKPNPNKVEFDNLYLDMNGIIHPCTHPEDKPAPRNEDEMMVAIFECIDRLM 89
Query: 95 RIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIA 154
IVRPR++LYMAIDGVAPRAKMNQ RSRRFRASKE AEK
Sbjct: 90 NIVRPRQVLYMAIDGVAPRAKMNQ-------------------QRSRRFRASKEAAEKAT 130
Query: 155 EVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWK 214
E+A+IRE+L A GCILPPEKEKG+HFDSNCITPGTPFM LS CL YY+HDR+NN+PGWK
Sbjct: 131 EIAKIREELAAKGCILPPEKEKGAHFDSNCITPGTPFMDRLSKCLQYYVHDRMNNNPGWK 190
Query: 215 GIKVILSDANVP 226
G+KVILSDANVP
Sbjct: 191 GLKVILSDANVP 202
>gi|321474178|gb|EFX85144.1| hypothetical protein DAPPUDRAFT_194028 [Daphnia pulex]
Length = 827
Score = 289 bits (739), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 137/192 (71%), Positives = 152/192 (79%), Gaps = 19/192 (9%)
Query: 35 NGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLF 94
+G+ +P D SKPNPNG+EFDNLYLDMNGIIHPCTHPED+PAP++EDEMMVAIFECIDR+F
Sbjct: 31 DGKALPVDVSKPNPNGVEFDNLYLDMNGIIHPCTHPEDRPAPRNEDEMMVAIFECIDRMF 90
Query: 95 RIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIA 154
IVRPRKLLYMAIDGVAPRAKMNQ RSRRFRASKE AEK+
Sbjct: 91 AIVRPRKLLYMAIDGVAPRAKMNQ-------------------QRSRRFRASKEIAEKVM 131
Query: 155 EVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWK 214
+A +RE L+A G +P EK KG HFDSNCITPGTPFM LSACLHYY+HDRL NDPGWK
Sbjct: 132 TIATVRESLMARGAYVPSEKSKGEHFDSNCITPGTPFMHRLSACLHYYVHDRLRNDPGWK 191
Query: 215 GIKVILSDANVP 226
+ VILSDANVP
Sbjct: 192 NVSVILSDANVP 203
>gi|242011511|ref|XP_002426492.1| 5'-3' exoribonuclease, putative [Pediculus humanus corporis]
gi|212510618|gb|EEB13754.1| 5'-3' exoribonuclease, putative [Pediculus humanus corporis]
Length = 869
Score = 289 bits (739), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 140/196 (71%), Positives = 156/196 (79%), Gaps = 19/196 (9%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
P+ ++G KI DS +PNPNG+EFDNLYLDMNGIIHPCTHPEDKPAPK+EDEMM+ IF+CI
Sbjct: 26 PKVIDGVKISVDSLQPNPNGVEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMIEIFDCI 85
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
DRLF IVRPRKLLY+AIDGVAPRAKMNQ RSRRFRASKE+A
Sbjct: 86 DRLFSIVRPRKLLYLAIDGVAPRAKMNQ-------------------QRSRRFRASKESA 126
Query: 151 EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
EKI E+ R+RE+LL G LPPEK + SHFDSNCITPGTPFM LSACL YYIHD+LNND
Sbjct: 127 EKIEEITRLREELLNKGAYLPPEKPQESHFDSNCITPGTPFMNRLSACLDYYIHDKLNND 186
Query: 211 PGWKGIKVILSDANVP 226
WKGIKVILSDA+VP
Sbjct: 187 AAWKGIKVILSDASVP 202
>gi|405969602|gb|EKC34564.1| 5'-3' exoribonuclease 2 [Crassostrea gigas]
Length = 954
Score = 286 bits (733), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 139/196 (70%), Positives = 155/196 (79%), Gaps = 19/196 (9%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
P+EVNG KIP D+S+PNPN EFDNLYLDMNGIIHPC HPEDKPAPK+EDEMM+ IFE I
Sbjct: 26 PREVNGVKIPVDTSQPNPNDYEFDNLYLDMNGIIHPCCHPEDKPAPKNEDEMMILIFEYI 85
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
DR+F IVRPRK+LYMAIDGVAPRAKMNQ RSRRFRASKET
Sbjct: 86 DRIFSIVRPRKVLYMAIDGVAPRAKMNQ-------------------QRSRRFRASKETK 126
Query: 151 EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
EKI E++R+R++L G LPPEKEKG HFDSNCITPGTPFM L+ CL YYIH+RLNND
Sbjct: 127 EKIEEMSRLRDELTTKGFNLPPEKEKGEHFDSNCITPGTPFMFRLADCLRYYIHERLNND 186
Query: 211 PGWKGIKVILSDANVP 226
PGW+ IK+ILSDANVP
Sbjct: 187 PGWQNIKIILSDANVP 202
>gi|312384683|gb|EFR29353.1| hypothetical protein AND_01770 [Anopheles darlingi]
Length = 867
Score = 285 bits (730), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 141/183 (77%), Positives = 147/183 (80%), Gaps = 19/183 (10%)
Query: 44 SKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLL 103
S PNPN +EFDNLYLDMNGIIHPCTHPEDKPAPK+EDEMMVAIFECIDRL IVRPRK+L
Sbjct: 2 SNPNPNRIEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIFECIDRLMNIVRPRKVL 61
Query: 104 YMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKL 163
YMAIDGVAPRAKMNQ RSRRFRASKE AEK EVARIRE+L
Sbjct: 62 YMAIDGVAPRAKMNQ-------------------QRSRRFRASKEAAEKATEVARIREEL 102
Query: 164 LADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDA 223
A G ILPPEKEKGSHFDSNCITPGTPFM LS CL YYIHDR+NN PGWK +KVILSDA
Sbjct: 103 AAKGAILPPEKEKGSHFDSNCITPGTPFMDRLSKCLQYYIHDRMNNYPGWKDLKVILSDA 162
Query: 224 NVP 226
NVP
Sbjct: 163 NVP 165
>gi|427778459|gb|JAA54681.1| Putative 5'-3' exonuclease xrn1/kem1/sep1 involved in dna strand
exchange and mrna turnover, partial [Rhipicephalus
pulchellus]
Length = 856
Score = 283 bits (725), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 138/196 (70%), Positives = 155/196 (79%), Gaps = 19/196 (9%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
PQ V+G KIP D++KPNPN +EFDNLYLDMNGIIHPC HPE+KPAPK+EDEMMV IFE I
Sbjct: 26 PQVVDGVKIPVDTTKPNPNDVEFDNLYLDMNGIIHPCCHPENKPAPKNEDEMMVDIFEYI 85
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
DR+F +VRPR+LLYMAIDGVAPRAKMNQ RSRRFRASKE+A
Sbjct: 86 DRIFSVVRPRRLLYMAIDGVAPRAKMNQ-------------------QRSRRFRASKESA 126
Query: 151 EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
EK+ E++RIR +L G LPPEK+K HFDSNCITPGTPFM L+ CLHYYIHDRLNND
Sbjct: 127 EKVEEMSRIRAELRDRGVPLPPEKDKSEHFDSNCITPGTPFMDRLAKCLHYYIHDRLNND 186
Query: 211 PGWKGIKVILSDANVP 226
PGWK I+VILSDANVP
Sbjct: 187 PGWKNIQVILSDANVP 202
>gi|195107132|ref|XP_001998170.1| GI23821 [Drosophila mojavensis]
gi|193914764|gb|EDW13631.1| GI23821 [Drosophila mojavensis]
Length = 793
Score = 281 bits (720), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 138/191 (72%), Positives = 149/191 (78%), Gaps = 19/191 (9%)
Query: 36 GQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFR 95
G+ I D + PNPNG+EFDNLYLDMNGIIHPCTHPEDKPAPK+E+EMMVAIFECIDRLF
Sbjct: 32 GKTIYEDPTLPNPNGVEFDNLYLDMNGIIHPCTHPEDKPAPKNEEEMMVAIFECIDRLFG 91
Query: 96 IVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAE 155
IVRPRKLLYMAIDGVAPRAKMNQ RSRRFRA+KET EK E
Sbjct: 92 IVRPRKLLYMAIDGVAPRAKMNQ-------------------QRSRRFRAAKETIEKRIE 132
Query: 156 VARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKG 215
+ RIR +LL GC LPPEKEKG HFDSNCITPGTPFM LS CLHYYIH R+N +P WK
Sbjct: 133 IERIRNELLTRGCKLPPEKEKGEHFDSNCITPGTPFMDRLSKCLHYYIHHRINTNPAWKR 192
Query: 216 IKVILSDANVP 226
I+VILSDANVP
Sbjct: 193 IQVILSDANVP 203
>gi|241786594|ref|XP_002414458.1| 5'->3' exoribonuclease, putative [Ixodes scapularis]
gi|215508669|gb|EEC18123.1| 5'->3' exoribonuclease, putative [Ixodes scapularis]
Length = 759
Score = 275 bits (704), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 134/193 (69%), Positives = 151/193 (78%), Gaps = 19/193 (9%)
Query: 34 VNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRL 93
V+G K+P D +KPNPN +EFDNLYLDMNGIIHPC HPE+KPAPK+EDEMMV IFE IDR+
Sbjct: 27 VDGVKVPVDMTKPNPNDVEFDNLYLDMNGIIHPCCHPENKPAPKNEDEMMVDIFEYIDRI 86
Query: 94 FRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKI 153
+VRPR+LLYMAIDGVAPRAKMNQ RSRRFRASKETAEK+
Sbjct: 87 MSVVRPRRLLYMAIDGVAPRAKMNQ-------------------QRSRRFRASKETAEKV 127
Query: 154 AEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGW 213
E++RIR +L G LPPEK K HFDSNCITPGTPFMA L+ CLHYY+HDR+NNDPGW
Sbjct: 128 EEMSRIRTELRDKGIPLPPEKPKSEHFDSNCITPGTPFMARLAKCLHYYVHDRMNNDPGW 187
Query: 214 KGIKVILSDANVP 226
K I+VILSDANVP
Sbjct: 188 KNIEVILSDANVP 200
>gi|157138197|ref|XP_001664171.1| 5'-3' exoribonuclease, putative [Aedes aegypti]
gi|108880656|gb|EAT44881.1| AAEL003800-PA [Aedes aegypti]
Length = 958
Score = 275 bits (702), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 140/185 (75%), Positives = 152/185 (82%), Gaps = 19/185 (10%)
Query: 42 DSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRK 101
D ++PNPN +EFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRL IVRPRK
Sbjct: 37 DMTQPNPNKVEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLMNIVRPRK 96
Query: 102 LLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIRE 161
LLYMAIDGVAPRAKMNQ RSRRFRASKE AEK AEV +IR+
Sbjct: 97 LLYMAIDGVAPRAKMNQ-------------------QRSRRFRASKEAAEKAAEVQKIRD 137
Query: 162 KLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILS 221
+L A GCILPPEKEKG+HFDSNCITPGTPFM LS CL YY+HDR+NN+PGWKG+K+ILS
Sbjct: 138 ELRAKGCILPPEKEKGAHFDSNCITPGTPFMDRLSKCLQYYVHDRMNNNPGWKGLKIILS 197
Query: 222 DANVP 226
DANVP
Sbjct: 198 DANVP 202
>gi|410954455|ref|XP_003983880.1| PREDICTED: 5'-3' exoribonuclease 2 [Felis catus]
Length = 1093
Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 135/199 (67%), Positives = 149/199 (74%), Gaps = 20/199 (10%)
Query: 28 VSLPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIF 87
V+ P+E NG KIP D+SKPNPN +EFDNLYLDMNGIIHPCTHPEDKPAPK+EDEMMVAIF
Sbjct: 162 VTSPKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIF 221
Query: 88 ECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASK 147
E IDRLF IVRPR+LLYMAIDGVAPRAKMNQ RSRRFRASK
Sbjct: 222 EYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQ-------------------QRSRRFRASK 262
Query: 148 ETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRL 207
E E E R+RE++L+ G LPPE+ K FDSNCITPGT FM L+ CL YYI DRL
Sbjct: 263 EGMEAAVEKQRVREEILSKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIADRL 321
Query: 208 NNDPGWKGIKVILSDANVP 226
NNDPGWK + VILSDA+ P
Sbjct: 322 NNDPGWKNLTVILSDASAP 340
>gi|354468134|ref|XP_003496522.1| PREDICTED: 5'-3' exoribonuclease 2-like [Cricetulus griseus]
Length = 1045
Score = 267 bits (682), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 136/199 (68%), Positives = 148/199 (74%), Gaps = 20/199 (10%)
Query: 28 VSLPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIF 87
V P+E NG KIP D+SKPNPN +EFDNLYLDMNGIIHPCTHPEDKPAPK+EDEMMVAIF
Sbjct: 97 VVRPKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIF 156
Query: 88 ECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASK 147
E IDRLF IVRPR+LLYMAIDGVAPRAKMNQ RSRRFRASK
Sbjct: 157 EYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQ-------------------QRSRRFRASK 197
Query: 148 ETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRL 207
E E E R+RE++LA G LPPE+ K FDSNCITPGT FM L+ CL YYI DRL
Sbjct: 198 EGMEAAVEKQRVREEILAKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIADRL 256
Query: 208 NNDPGWKGIKVILSDANVP 226
NNDPGWK + VILSDA+ P
Sbjct: 257 NNDPGWKNLTVILSDASAP 275
>gi|149408751|ref|XP_001505862.1| PREDICTED: 5'-3' exoribonuclease 2 [Ornithorhynchus anatinus]
Length = 950
Score = 267 bits (682), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 135/196 (68%), Positives = 148/196 (75%), Gaps = 20/196 (10%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
P+E NG KIP D+SKPNPN +EFDNLYLDMNGIIHPCTHPEDKPAPK+EDEMMVAIFE I
Sbjct: 26 PKECNGVKIPVDTSKPNPNEVEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIFEYI 85
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
DRLF IVRPR+LLYMAIDGVAPRAKMNQ RSRRFRASKE A
Sbjct: 86 DRLFNIVRPRRLLYMAIDGVAPRAKMNQ-------------------QRSRRFRASKEGA 126
Query: 151 EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
E E R+RE++LA G LPPE+ K FDSNCITPGT FM L+ CL YYI DRLNN+
Sbjct: 127 EATVEKQRVREEILAKGGYLPPEEVK-ERFDSNCITPGTEFMDNLAKCLRYYIADRLNNE 185
Query: 211 PGWKGIKVILSDANVP 226
PGWK + VILSDA+ P
Sbjct: 186 PGWKNLTVILSDASAP 201
>gi|148696569|gb|EDL28516.1| 5'-3' exoribonuclease 2, isoform CRA_d [Mus musculus]
Length = 1002
Score = 266 bits (681), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 135/196 (68%), Positives = 147/196 (75%), Gaps = 20/196 (10%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
P+E NG KIP D+SKPNPN +EFDNLYLDMNGIIHPCTHPEDKPAPK+EDEMMVAIFE I
Sbjct: 45 PKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIFEYI 104
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
DRLF IVRPR+LLYMAIDGVAPRAKMNQ RSRRFRASKE
Sbjct: 105 DRLFNIVRPRRLLYMAIDGVAPRAKMNQ-------------------QRSRRFRASKEGM 145
Query: 151 EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
E E R+RE++LA G LPPE+ K FDSNCITPGT FM L+ CL YYI DRLNND
Sbjct: 146 EAAVEKQRVREEILAKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIADRLNND 204
Query: 211 PGWKGIKVILSDANVP 226
PGWK + VILSDA+ P
Sbjct: 205 PGWKNLTVILSDASAP 220
>gi|281339379|gb|EFB14963.1| hypothetical protein PANDA_012248 [Ailuropoda melanoleuca]
Length = 929
Score = 266 bits (681), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 135/196 (68%), Positives = 147/196 (75%), Gaps = 20/196 (10%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
P+E NG KIP D+SKPNPN +EFDNLYLDMNGIIHPCTHPEDKPAPK+EDEMMVAIFE I
Sbjct: 26 PKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIFEYI 85
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
DRLF IVRPR+LLYMAIDGVAPRAKMNQ RSRRFRASKE
Sbjct: 86 DRLFNIVRPRRLLYMAIDGVAPRAKMNQ-------------------QRSRRFRASKEGM 126
Query: 151 EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
E E R+RE++LA G LPPE+ K FDSNCITPGT FM L+ CL YYI DRLNND
Sbjct: 127 EAAVEKQRVREEILAKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIADRLNND 185
Query: 211 PGWKGIKVILSDANVP 226
PGWK + VILSDA+ P
Sbjct: 186 PGWKNLTVILSDASAP 201
>gi|117606214|ref|NP_036047.2| 5'-3' exoribonuclease 2 [Mus musculus]
gi|30173483|sp|Q9DBR1.1|XRN2_MOUSE RecName: Full=5'-3' exoribonuclease 2; AltName: Full=Protein Dhm1
gi|12836253|dbj|BAB23573.1| unnamed protein product [Mus musculus]
gi|26343603|dbj|BAC35458.1| unnamed protein product [Mus musculus]
gi|32451718|gb|AAH54743.1| 5'-3' exoribonuclease 2 [Mus musculus]
gi|74188828|dbj|BAE39193.1| unnamed protein product [Mus musculus]
gi|148696571|gb|EDL28518.1| 5'-3' exoribonuclease 2, isoform CRA_f [Mus musculus]
Length = 951
Score = 266 bits (680), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 135/196 (68%), Positives = 147/196 (75%), Gaps = 20/196 (10%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
P+E NG KIP D+SKPNPN +EFDNLYLDMNGIIHPCTHPEDKPAPK+EDEMMVAIFE I
Sbjct: 26 PKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIFEYI 85
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
DRLF IVRPR+LLYMAIDGVAPRAKMNQ RSRRFRASKE
Sbjct: 86 DRLFNIVRPRRLLYMAIDGVAPRAKMNQ-------------------QRSRRFRASKEGM 126
Query: 151 EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
E E R+RE++LA G LPPE+ K FDSNCITPGT FM L+ CL YYI DRLNND
Sbjct: 127 EAAVEKQRVREEILAKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIADRLNND 185
Query: 211 PGWKGIKVILSDANVP 226
PGWK + VILSDA+ P
Sbjct: 186 PGWKNLTVILSDASAP 201
>gi|402883351|ref|XP_003905183.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 1 [Papio anubis]
gi|355784737|gb|EHH65588.1| 5'-3' exoribonuclease 2 [Macaca fascicularis]
gi|380810654|gb|AFE77202.1| 5'-3' exoribonuclease 2 [Macaca mulatta]
gi|383416591|gb|AFH31509.1| 5'-3' exoribonuclease 2 [Macaca mulatta]
gi|384945858|gb|AFI36534.1| 5'-3' exoribonuclease 2 [Macaca mulatta]
Length = 950
Score = 266 bits (680), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 135/196 (68%), Positives = 147/196 (75%), Gaps = 20/196 (10%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
P+E NG KIP D+SKPNPN +EFDNLYLDMNGIIHPCTHPEDKPAPK+EDEMMVAIFE I
Sbjct: 26 PKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIFEYI 85
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
DRLF IVRPR+LLYMAIDGVAPRAKMNQ RSRRFRASKE
Sbjct: 86 DRLFSIVRPRRLLYMAIDGVAPRAKMNQ-------------------QRSRRFRASKEGM 126
Query: 151 EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
E E R+RE++LA G LPPE+ K FDSNCITPGT FM L+ CL YYI DRLNND
Sbjct: 127 EAAVEKQRVREEILAKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIADRLNND 185
Query: 211 PGWKGIKVILSDANVP 226
PGWK + VILSDA+ P
Sbjct: 186 PGWKNLTVILSDASAP 201
>gi|195577157|ref|XP_002078439.1| GD23438 [Drosophila simulans]
gi|194190448|gb|EDX04024.1| GD23438 [Drosophila simulans]
Length = 842
Score = 266 bits (680), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 129/167 (77%), Positives = 136/167 (81%), Gaps = 19/167 (11%)
Query: 60 MNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQP 119
MNGIIHPCTHPEDKPAPK+EDEMMVAIFECIDRLF IVRPRKLLYMAIDGVAPRAKMNQ
Sbjct: 1 MNGIIHPCTHPEDKPAPKNEDEMMVAIFECIDRLFGIVRPRKLLYMAIDGVAPRAKMNQ- 59
Query: 120 LTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSH 179
RSRRFRA+KET EK EVARIRE+LL+ GC LPPEKEKG H
Sbjct: 60 ------------------QRSRRFRAAKETTEKRLEVARIREELLSRGCKLPPEKEKGDH 101
Query: 180 FDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
FDSNCITPGTPFM LS CLHY++HDRLNN+P WKGIKVILSDANVP
Sbjct: 102 FDSNCITPGTPFMDRLSKCLHYFVHDRLNNNPAWKGIKVILSDANVP 148
>gi|193786052|dbj|BAG50941.1| unnamed protein product [Homo sapiens]
Length = 950
Score = 266 bits (680), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 135/196 (68%), Positives = 147/196 (75%), Gaps = 20/196 (10%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
P+E NG KIP D+SKPNPN +EFDNLYLDMNGIIHPCTHPEDKPAPK+EDEMMVAIFE I
Sbjct: 26 PKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIFEYI 85
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
DRLF IVRPR+LLYMAIDGVAPRAKMNQ RSRRFRASKE
Sbjct: 86 DRLFSIVRPRRLLYMAIDGVAPRAKMNQ-------------------QRSRRFRASKEGM 126
Query: 151 EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
E E R+RE++LA G LPPE+ K FDSNCITPGT FM L+ CL YYI DRLNND
Sbjct: 127 EAAVEKQRVREEILAKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIADRLNND 185
Query: 211 PGWKGIKVILSDANVP 226
PGWK + VILSDA+ P
Sbjct: 186 PGWKNLTVILSDASAP 201
>gi|197100138|ref|NP_001126942.1| 5'-3' exoribonuclease 2 [Pongo abelii]
gi|75040978|sp|Q5R4L5.1|XRN2_PONAB RecName: Full=5'-3' exoribonuclease 2
gi|55733236|emb|CAH93301.1| hypothetical protein [Pongo abelii]
Length = 950
Score = 266 bits (680), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 135/196 (68%), Positives = 147/196 (75%), Gaps = 20/196 (10%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
P+E NG KIP D+SKPNPN +EFDNLYLDMNGIIHPCTHPEDKPAPK+EDEMMVAIFE I
Sbjct: 26 PKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIFEYI 85
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
DRLF IVRPR+LLYMAIDGVAPRAKMNQ RSRRFRASKE
Sbjct: 86 DRLFSIVRPRRLLYMAIDGVAPRAKMNQ-------------------QRSRRFRASKEGM 126
Query: 151 EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
E E R+RE++LA G LPPE+ K FDSNCITPGT FM L+ CL YYI DRLNND
Sbjct: 127 EAAVEKQRVREEILAKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIADRLNND 185
Query: 211 PGWKGIKVILSDANVP 226
PGWK + VILSDA+ P
Sbjct: 186 PGWKNLTVILSDASAP 201
>gi|18860916|ref|NP_036387.2| 5'-3' exoribonuclease 2 [Homo sapiens]
gi|30173484|sp|Q9H0D6.1|XRN2_HUMAN RecName: Full=5'-3' exoribonuclease 2; AltName: Full=DHM1-like
protein; Short=DHP protein
gi|12053189|emb|CAB66775.1| hypothetical protein [Homo sapiens]
gi|119630591|gb|EAX10186.1| 5'-3' exoribonuclease 2, isoform CRA_a [Homo sapiens]
gi|182888117|gb|AAI60100.1| 5'-3' exoribonuclease 2 [synthetic construct]
Length = 950
Score = 266 bits (680), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 135/196 (68%), Positives = 147/196 (75%), Gaps = 20/196 (10%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
P+E NG KIP D+SKPNPN +EFDNLYLDMNGIIHPCTHPEDKPAPK+EDEMMVAIFE I
Sbjct: 26 PKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIFEYI 85
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
DRLF IVRPR+LLYMAIDGVAPRAKMNQ RSRRFRASKE
Sbjct: 86 DRLFSIVRPRRLLYMAIDGVAPRAKMNQ-------------------QRSRRFRASKEGM 126
Query: 151 EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
E E R+RE++LA G LPPE+ K FDSNCITPGT FM L+ CL YYI DRLNND
Sbjct: 127 EAAVEKQRVREEILAKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIADRLNND 185
Query: 211 PGWKGIKVILSDANVP 226
PGWK + VILSDA+ P
Sbjct: 186 PGWKNLTVILSDASAP 201
>gi|417413149|gb|JAA52920.1| Putative 5'-3' exonuclease xrn1/kem1/sep1 involved in dna strand
exchange and mrna turnover, partial [Desmodus rotundus]
Length = 926
Score = 266 bits (680), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 135/196 (68%), Positives = 147/196 (75%), Gaps = 20/196 (10%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
P+E NG KIP D+SKPNPN +EFDNLYLDMNGIIHPCTHPEDKPAPK+EDEMMVAIFE I
Sbjct: 2 PKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIFEYI 61
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
DRLF IVRPR+LLYMAIDGVAPRAKMNQ RSRRFRASKE
Sbjct: 62 DRLFSIVRPRRLLYMAIDGVAPRAKMNQ-------------------QRSRRFRASKEGM 102
Query: 151 EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
E E R+RE++LA G LPPE+ K FDSNCITPGT FM L+ CL YYI DRLNND
Sbjct: 103 EAAVEKQRVREEILAKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIADRLNND 161
Query: 211 PGWKGIKVILSDANVP 226
PGWK + VILSDA+ P
Sbjct: 162 PGWKNLTVILSDASAP 177
>gi|74207538|dbj|BAE40020.1| unnamed protein product [Mus musculus]
Length = 951
Score = 266 bits (680), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 135/196 (68%), Positives = 147/196 (75%), Gaps = 20/196 (10%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
P+E NG KIP D+SKPNPN +EFDNLYLDMNGIIHPCTHPEDKPAPK+EDEMMVAIFE I
Sbjct: 26 PKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIFEYI 85
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
DRLF IVRPR+LLYMAIDGVAPRAKMNQ RSRRFRASKE
Sbjct: 86 DRLFNIVRPRRLLYMAIDGVAPRAKMNQ-------------------QRSRRFRASKEGM 126
Query: 151 EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
E E R+RE++LA G LPPE+ K FDSNCITPGT FM L+ CL YYI DRLNND
Sbjct: 127 EAAVEKQRVREEILAKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIADRLNND 185
Query: 211 PGWKGIKVILSDANVP 226
PGWK + VILSDA+ P
Sbjct: 186 PGWKNLTVILSDASAP 201
>gi|114681219|ref|XP_514546.2| PREDICTED: 5'-3' exoribonuclease 2 isoform 7 [Pan troglodytes]
gi|397478693|ref|XP_003810674.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 1 [Pan paniscus]
gi|410223814|gb|JAA09126.1| 5'-3' exoribonuclease 2 [Pan troglodytes]
gi|410252370|gb|JAA14152.1| 5'-3' exoribonuclease 2 [Pan troglodytes]
gi|410308366|gb|JAA32783.1| 5'-3' exoribonuclease 2 [Pan troglodytes]
gi|410334533|gb|JAA36213.1| 5'-3' exoribonuclease 2 [Pan troglodytes]
Length = 950
Score = 266 bits (680), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 135/196 (68%), Positives = 147/196 (75%), Gaps = 20/196 (10%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
P+E NG KIP D+SKPNPN +EFDNLYLDMNGIIHPCTHPEDKPAPK+EDEMMVAIFE I
Sbjct: 26 PKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIFEYI 85
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
DRLF IVRPR+LLYMAIDGVAPRAKMNQ RSRRFRASKE
Sbjct: 86 DRLFSIVRPRRLLYMAIDGVAPRAKMNQ-------------------QRSRRFRASKEGM 126
Query: 151 EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
E E R+RE++LA G LPPE+ K FDSNCITPGT FM L+ CL YYI DRLNND
Sbjct: 127 EAAVEKQRVREEILAKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIADRLNND 185
Query: 211 PGWKGIKVILSDANVP 226
PGWK + VILSDA+ P
Sbjct: 186 PGWKNLTVILSDASAP 201
>gi|26327149|dbj|BAC27318.1| unnamed protein product [Mus musculus]
Length = 952
Score = 266 bits (680), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 135/196 (68%), Positives = 147/196 (75%), Gaps = 20/196 (10%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
P+E NG KIP D+SKPNPN +EFDNLYLDMNGIIHPCTHPEDKPAPK+EDEMMVAIFE I
Sbjct: 26 PKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIFEYI 85
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
DRLF IVRPR+LLYMAIDGVAPRAKMNQ RSRRFRASKE
Sbjct: 86 DRLFNIVRPRRLLYMAIDGVAPRAKMNQ-------------------QRSRRFRASKEGM 126
Query: 151 EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
E E R+RE++LA G LPPE+ K FDSNCITPGT FM L+ CL YYI DRLNND
Sbjct: 127 EAAVEKQRVREEILAKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIADRLNND 185
Query: 211 PGWKGIKVILSDANVP 226
PGWK + VILSDA+ P
Sbjct: 186 PGWKNLTVILSDASAP 201
>gi|291388948|ref|XP_002710988.1| PREDICTED: 5'-3' exoribonuclease 2 [Oryctolagus cuniculus]
Length = 950
Score = 266 bits (680), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 135/196 (68%), Positives = 147/196 (75%), Gaps = 20/196 (10%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
P+E NG KIP D+SKPNPN +EFDNLYLDMNGIIHPCTHPEDKPAPK+EDEMMVAIFE I
Sbjct: 26 PKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIFEYI 85
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
DRLF IVRPR+LLYMAIDGVAPRAKMNQ RSRRFRASKE
Sbjct: 86 DRLFNIVRPRRLLYMAIDGVAPRAKMNQ-------------------QRSRRFRASKEGM 126
Query: 151 EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
E E R+RE++LA G LPPE+ K FDSNCITPGT FM L+ CL YYI DRLNND
Sbjct: 127 EAAVEKQRVREEILAKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIADRLNND 185
Query: 211 PGWKGIKVILSDANVP 226
PGWK + VILSDA+ P
Sbjct: 186 PGWKNLTVILSDASAP 201
>gi|344279981|ref|XP_003411764.1| PREDICTED: 5'-3' exoribonuclease 2 [Loxodonta africana]
Length = 950
Score = 266 bits (680), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 135/196 (68%), Positives = 147/196 (75%), Gaps = 20/196 (10%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
P+E NG KIP D+SKPNPN +EFDNLYLDMNGIIHPCTHPEDKPAPK+EDEMMVAIFE I
Sbjct: 26 PKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIFEYI 85
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
DRLF IVRPR+LLYMAIDGVAPRAKMNQ RSRRFRASKE
Sbjct: 86 DRLFNIVRPRRLLYMAIDGVAPRAKMNQ-------------------QRSRRFRASKEGM 126
Query: 151 EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
E E R+RE++LA G LPPE+ K FDSNCITPGT FM L+ CL YYI DRLNND
Sbjct: 127 EAAVEKQRVREEILAKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIADRLNND 185
Query: 211 PGWKGIKVILSDANVP 226
PGWK + VILSDA+ P
Sbjct: 186 PGWKNLTVILSDASAP 201
>gi|335304534|ref|XP_003134355.2| PREDICTED: 5'-3' exoribonuclease 2 [Sus scrofa]
Length = 950
Score = 266 bits (680), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 135/196 (68%), Positives = 147/196 (75%), Gaps = 20/196 (10%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
P+E NG KIP D+SKPNPN +EFDNLYLDMNGIIHPCTHPEDKPAPK+EDEMMVAIFE I
Sbjct: 26 PKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIFEYI 85
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
DRLF IVRPR+LLYMAIDGVAPRAKMNQ RSRRFRASKE
Sbjct: 86 DRLFNIVRPRRLLYMAIDGVAPRAKMNQ-------------------QRSRRFRASKEGM 126
Query: 151 EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
E E R+RE++LA G LPPE+ K FDSNCITPGT FM L+ CL YYI DRLNND
Sbjct: 127 EAAVEKQRVREEILAKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIADRLNND 185
Query: 211 PGWKGIKVILSDANVP 226
PGWK + VILSDA+ P
Sbjct: 186 PGWKNLTVILSDASAP 201
>gi|332238204|ref|XP_003268293.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 1 [Nomascus leucogenys]
Length = 950
Score = 266 bits (680), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 135/196 (68%), Positives = 147/196 (75%), Gaps = 20/196 (10%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
P+E NG KIP D+SKPNPN +EFDNLYLDMNGIIHPCTHPEDKPAPK+EDEMMVAIFE I
Sbjct: 26 PKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIFEYI 85
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
DRLF IVRPR+LLYMAIDGVAPRAKMNQ RSRRFRASKE
Sbjct: 86 DRLFSIVRPRRLLYMAIDGVAPRAKMNQ-------------------QRSRRFRASKEGM 126
Query: 151 EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
E E R+RE++LA G LPPE+ K FDSNCITPGT FM L+ CL YYI DRLNND
Sbjct: 127 EAAVEKQRVREEILAKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIADRLNND 185
Query: 211 PGWKGIKVILSDANVP 226
PGWK + VILSDA+ P
Sbjct: 186 PGWKNLTVILSDASAP 201
>gi|402883353|ref|XP_003905184.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 2 [Papio anubis]
Length = 971
Score = 266 bits (679), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 135/196 (68%), Positives = 147/196 (75%), Gaps = 20/196 (10%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
P+E NG KIP D+SKPNPN +EFDNLYLDMNGIIHPCTHPEDKPAPK+EDEMMVAIFE I
Sbjct: 47 PKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIFEYI 106
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
DRLF IVRPR+LLYMAIDGVAPRAKMNQ RSRRFRASKE
Sbjct: 107 DRLFSIVRPRRLLYMAIDGVAPRAKMNQ-------------------QRSRRFRASKEGM 147
Query: 151 EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
E E R+RE++LA G LPPE+ K FDSNCITPGT FM L+ CL YYI DRLNND
Sbjct: 148 EAAVEKQRVREEILAKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIADRLNND 206
Query: 211 PGWKGIKVILSDANVP 226
PGWK + VILSDA+ P
Sbjct: 207 PGWKNLTVILSDASAP 222
>gi|73991017|ref|XP_534324.2| PREDICTED: 5'-3' exoribonuclease 2 isoform 2 [Canis lupus
familiaris]
Length = 950
Score = 266 bits (679), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 135/196 (68%), Positives = 147/196 (75%), Gaps = 20/196 (10%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
P+E NG KIP D+SKPNPN +EFDNLYLDMNGIIHPCTHPEDKPAPK+EDEMMVAIFE I
Sbjct: 26 PKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIFEYI 85
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
DRLF IVRPR+LLYMAIDGVAPRAKMNQ RSRRFRASKE
Sbjct: 86 DRLFNIVRPRRLLYMAIDGVAPRAKMNQ-------------------QRSRRFRASKEGM 126
Query: 151 EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
E E R+RE++LA G LPPE+ K FDSNCITPGT FM L+ CL YYI DRLNND
Sbjct: 127 EAAVEKQRVREEILAKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIADRLNND 185
Query: 211 PGWKGIKVILSDANVP 226
PGWK + VILSDA+ P
Sbjct: 186 PGWKNLTVILSDASAP 201
>gi|296200314|ref|XP_002747533.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 1 [Callithrix jacchus]
Length = 950
Score = 266 bits (679), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 135/196 (68%), Positives = 147/196 (75%), Gaps = 20/196 (10%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
P+E NG KIP D+SKPNPN +EFDNLYLDMNGIIHPCTHPEDKPAPK+EDEMMVAIFE I
Sbjct: 26 PKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIFEYI 85
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
DRLF IVRPR+LLYMAIDGVAPRAKMNQ RSRRFRASKE
Sbjct: 86 DRLFSIVRPRRLLYMAIDGVAPRAKMNQ-------------------QRSRRFRASKEGM 126
Query: 151 EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
E E R+RE++LA G LPPE+ K FDSNCITPGT FM L+ CL YYI DRLNND
Sbjct: 127 EAAVEKQRVREEILAKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIADRLNND 185
Query: 211 PGWKGIKVILSDANVP 226
PGWK + VILSDA+ P
Sbjct: 186 PGWKNLTVILSDASAP 201
>gi|301775465|ref|XP_002923152.1| PREDICTED: 5'-3' exoribonuclease 2-like [Ailuropoda melanoleuca]
Length = 950
Score = 266 bits (679), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 135/196 (68%), Positives = 147/196 (75%), Gaps = 20/196 (10%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
P+E NG KIP D+SKPNPN +EFDNLYLDMNGIIHPCTHPEDKPAPK+EDEMMVAIFE I
Sbjct: 26 PKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIFEYI 85
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
DRLF IVRPR+LLYMAIDGVAPRAKMNQ RSRRFRASKE
Sbjct: 86 DRLFNIVRPRRLLYMAIDGVAPRAKMNQ-------------------QRSRRFRASKEGM 126
Query: 151 EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
E E R+RE++LA G LPPE+ K FDSNCITPGT FM L+ CL YYI DRLNND
Sbjct: 127 EAAVEKQRVREEILAKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIADRLNND 185
Query: 211 PGWKGIKVILSDANVP 226
PGWK + VILSDA+ P
Sbjct: 186 PGWKNLTVILSDASAP 201
>gi|297260411|ref|XP_001094734.2| PREDICTED: 5'-3' exoribonuclease 2 isoform 2 [Macaca mulatta]
Length = 951
Score = 266 bits (679), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 135/196 (68%), Positives = 147/196 (75%), Gaps = 20/196 (10%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
P+E NG KIP D+SKPNPN +EFDNLYLDMNGIIHPCTHPEDKPAPK+EDEMMVAIFE I
Sbjct: 26 PKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIFEYI 85
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
DRLF IVRPR+LLYMAIDGVAPRAKMNQ RSRRFRASKE
Sbjct: 86 DRLFSIVRPRRLLYMAIDGVAPRAKMNQ-------------------QRSRRFRASKEGM 126
Query: 151 EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
E E R+RE++LA G LPPE+ K FDSNCITPGT FM L+ CL YYI DRLNND
Sbjct: 127 EAAVEKQRVREEILAKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIADRLNND 185
Query: 211 PGWKGIKVILSDANVP 226
PGWK + VILSDA+ P
Sbjct: 186 PGWKNLTVILSDASAP 201
>gi|148696566|gb|EDL28513.1| 5'-3' exoribonuclease 2, isoform CRA_a [Mus musculus]
Length = 915
Score = 266 bits (679), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 135/196 (68%), Positives = 147/196 (75%), Gaps = 20/196 (10%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
P+E NG KIP D+SKPNPN +EFDNLYLDMNGIIHPCTHPEDKPAPK+EDEMMVAIFE I
Sbjct: 26 PKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIFEYI 85
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
DRLF IVRPR+LLYMAIDGVAPRAKMNQ RSRRFRASKE
Sbjct: 86 DRLFNIVRPRRLLYMAIDGVAPRAKMNQ-------------------QRSRRFRASKEGM 126
Query: 151 EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
E E R+RE++LA G LPPE+ K FDSNCITPGT FM L+ CL YYI DRLNND
Sbjct: 127 EAAVEKQRVREEILAKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIADRLNND 185
Query: 211 PGWKGIKVILSDANVP 226
PGWK + VILSDA+ P
Sbjct: 186 PGWKNLTVILSDASAP 201
>gi|149041185|gb|EDL95118.1| 5'-3' exoribonuclease 2 (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 951
Score = 266 bits (679), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 135/196 (68%), Positives = 147/196 (75%), Gaps = 20/196 (10%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
P+E NG KIP D+SKPNPN +EFDNLYLDMNGIIHPCTHPEDKPAPK+EDEMMVAIFE I
Sbjct: 26 PKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIFEYI 85
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
DRLF IVRPR+LLYMAIDGVAPRAKMNQ RSRRFRASKE
Sbjct: 86 DRLFNIVRPRRLLYMAIDGVAPRAKMNQ-------------------QRSRRFRASKEGM 126
Query: 151 EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
E E R+RE++LA G LPPE+ K FDSNCITPGT FM L+ CL YYI DRLNND
Sbjct: 127 EAAVEKQRVREEILAKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIADRLNND 185
Query: 211 PGWKGIKVILSDANVP 226
PGWK + VILSDA+ P
Sbjct: 186 PGWKNLTVILSDASAP 201
>gi|426391130|ref|XP_004061937.1| PREDICTED: 5'-3' exoribonuclease 2 [Gorilla gorilla gorilla]
Length = 1099
Score = 266 bits (679), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 135/196 (68%), Positives = 147/196 (75%), Gaps = 20/196 (10%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
P+E NG KIP D+SKPNPN +EFDNLYLDMNGIIHPCTHPEDKPAPK+EDEMMVAIFE I
Sbjct: 219 PKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIFEYI 278
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
DRLF IVRPR+LLYMAIDGVAPRAKMNQ RSRRFRASKE
Sbjct: 279 DRLFSIVRPRRLLYMAIDGVAPRAKMNQ-------------------QRSRRFRASKEGM 319
Query: 151 EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
E E R+RE++LA G LPPE+ K FDSNCITPGT FM L+ CL YYI DRLNND
Sbjct: 320 EAAVEKQRVREEILAKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIADRLNND 378
Query: 211 PGWKGIKVILSDANVP 226
PGWK + VILSDA+ P
Sbjct: 379 PGWKNLTVILSDASAP 394
>gi|403283597|ref|XP_003933201.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 1 [Saimiri boliviensis
boliviensis]
Length = 950
Score = 266 bits (679), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 135/196 (68%), Positives = 147/196 (75%), Gaps = 20/196 (10%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
P+E NG KIP D+SKPNPN +EFDNLYLDMNGIIHPCTHPEDKPAPK+EDEMMVAIFE I
Sbjct: 26 PKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIFEYI 85
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
DRLF IVRPR+LLYMAIDGVAPRAKMNQ RSRRFRASKE
Sbjct: 86 DRLFSIVRPRRLLYMAIDGVAPRAKMNQ-------------------QRSRRFRASKEGM 126
Query: 151 EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
E E R+RE++LA G LPPE+ K FDSNCITPGT FM L+ CL YYI DRLNND
Sbjct: 127 EAAVEKQRVREEILAKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIADRLNND 185
Query: 211 PGWKGIKVILSDANVP 226
PGWK + VILSDA+ P
Sbjct: 186 PGWKNLTVILSDASAP 201
>gi|149041186|gb|EDL95119.1| 5'-3' exoribonuclease 2 (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 915
Score = 266 bits (679), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 135/196 (68%), Positives = 147/196 (75%), Gaps = 20/196 (10%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
P+E NG KIP D+SKPNPN +EFDNLYLDMNGIIHPCTHPEDKPAPK+EDEMMVAIFE I
Sbjct: 26 PKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIFEYI 85
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
DRLF IVRPR+LLYMAIDGVAPRAKMNQ RSRRFRASKE
Sbjct: 86 DRLFNIVRPRRLLYMAIDGVAPRAKMNQ-------------------QRSRRFRASKEGM 126
Query: 151 EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
E E R+RE++LA G LPPE+ K FDSNCITPGT FM L+ CL YYI DRLNND
Sbjct: 127 EAAVEKQRVREEILAKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIADRLNND 185
Query: 211 PGWKGIKVILSDANVP 226
PGWK + VILSDA+ P
Sbjct: 186 PGWKNLTVILSDASAP 201
>gi|432092124|gb|ELK24810.1| 5'-3' exoribonuclease 2 [Myotis davidii]
Length = 925
Score = 265 bits (678), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 134/196 (68%), Positives = 147/196 (75%), Gaps = 20/196 (10%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
P+E NG K+P D+SKPNPN +EFDNLYLDMNGIIHPCTHPEDKPAPK+EDEMMVAIFE I
Sbjct: 26 PKECNGVKVPVDASKPNPNDVEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIFEYI 85
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
DRLF IVRPR+LLYMAIDGVAPRAKMNQ RSRRFRASKE
Sbjct: 86 DRLFNIVRPRRLLYMAIDGVAPRAKMNQ-------------------QRSRRFRASKEGM 126
Query: 151 EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
E E R+RE++LA G LPPE+ K FDSNCITPGT FM L+ CL YYI DRLNND
Sbjct: 127 EAAVEKQRVREEILAKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIADRLNND 185
Query: 211 PGWKGIKVILSDANVP 226
PGWK + VILSDA+ P
Sbjct: 186 PGWKNLTVILSDASAP 201
>gi|332858060|ref|XP_001145469.2| PREDICTED: 5'-3' exoribonuclease 2 isoform 5 [Pan troglodytes]
gi|397478697|ref|XP_003810676.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 3 [Pan paniscus]
Length = 1028
Score = 265 bits (678), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 135/196 (68%), Positives = 147/196 (75%), Gaps = 20/196 (10%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
P+E NG KIP D+SKPNPN +EFDNLYLDMNGIIHPCTHPEDKPAPK+EDEMMVAIFE I
Sbjct: 104 PKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIFEYI 163
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
DRLF IVRPR+LLYMAIDGVAPRAKMNQ RSRRFRASKE
Sbjct: 164 DRLFSIVRPRRLLYMAIDGVAPRAKMNQ-------------------QRSRRFRASKEGM 204
Query: 151 EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
E E R+RE++LA G LPPE+ K FDSNCITPGT FM L+ CL YYI DRLNND
Sbjct: 205 EAAVEKQRVREEILAKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIADRLNND 263
Query: 211 PGWKGIKVILSDANVP 226
PGWK + VILSDA+ P
Sbjct: 264 PGWKNLTVILSDASAP 279
>gi|349604825|gb|AEQ00267.1| 5'-3' exoribonuclease 2-like protein, partial [Equus caballus]
Length = 417
Score = 265 bits (678), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 135/196 (68%), Positives = 147/196 (75%), Gaps = 20/196 (10%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
P+E NG KIP D+SKPNPN +EFDNLYLDMNGIIHPCTHPEDKPAPK+EDEMMVAIFE I
Sbjct: 26 PKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIFEYI 85
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
DRLF IVRPR+LLYMAIDGVAPRAKMNQ RSRRFRASKE
Sbjct: 86 DRLFNIVRPRRLLYMAIDGVAPRAKMNQ-------------------QRSRRFRASKEGM 126
Query: 151 EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
E E R+RE++LA G LPPE+ K FDSNCITPGT FM L+ CL YYI DRLNND
Sbjct: 127 EAAVEKQRVREEILAKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIADRLNND 185
Query: 211 PGWKGIKVILSDANVP 226
PGWK + VILSDA+ P
Sbjct: 186 PGWKNLTVILSDASAP 201
>gi|355729473|gb|AES09879.1| 5'-3' exoribonuclease 2 [Mustela putorius furo]
Length = 412
Score = 265 bits (678), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 135/196 (68%), Positives = 147/196 (75%), Gaps = 20/196 (10%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
P+E NG KIP D+SKPNPN +EFDNLYLDMNGIIHPCTHPEDKPAPK+EDEMMVAIFE I
Sbjct: 26 PKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIFEYI 85
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
DRLF IVRPR+LLYMAIDGVAPRAKMNQ RSRRFRASKE
Sbjct: 86 DRLFNIVRPRRLLYMAIDGVAPRAKMNQ-------------------QRSRRFRASKEGM 126
Query: 151 EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
E E R+RE++LA G LPPE+ K FDSNCITPGT FM L+ CL YYI DRLNND
Sbjct: 127 EAAVEKQRVREEILAKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIADRLNND 185
Query: 211 PGWKGIKVILSDANVP 226
PGWK + VILSDA+ P
Sbjct: 186 PGWKNLTVILSDASAP 201
>gi|348581480|ref|XP_003476505.1| PREDICTED: 5'-3' exoribonuclease 2-like [Cavia porcellus]
Length = 950
Score = 265 bits (677), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 134/196 (68%), Positives = 147/196 (75%), Gaps = 20/196 (10%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
P+E NG K+P D+SKPNPN +EFDNLYLDMNGIIHPCTHPEDKPAPK+EDEMMVAIFE I
Sbjct: 26 PKECNGVKVPVDASKPNPNDVEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIFEYI 85
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
DRLF IVRPR+LLYMAIDGVAPRAKMNQ RSRRFRASKE
Sbjct: 86 DRLFNIVRPRRLLYMAIDGVAPRAKMNQ-------------------QRSRRFRASKEGM 126
Query: 151 EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
E E R+RE++LA G LPPE+ K FDSNCITPGT FM L+ CL YYI DRLNND
Sbjct: 127 EAAVEKQRVREEILAKGGYLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIADRLNND 185
Query: 211 PGWKGIKVILSDANVP 226
PGWK + VILSDA+ P
Sbjct: 186 PGWKNLTVILSDASAP 201
>gi|74227371|dbj|BAE21766.1| unnamed protein product [Mus musculus]
Length = 417
Score = 265 bits (677), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 135/196 (68%), Positives = 147/196 (75%), Gaps = 20/196 (10%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
P+E NG KIP D+SKPNPN +EFDNLYLDMNGIIHPCTHPEDKPAPK+EDEMMVAIFE I
Sbjct: 26 PKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIFEYI 85
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
DRLF IVRPR+LLYMAIDGVAPRAKMNQ RSRRFRASKE
Sbjct: 86 DRLFNIVRPRRLLYMAIDGVAPRAKMNQ-------------------QRSRRFRASKEGM 126
Query: 151 EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
E E R+RE++LA G LPPE+ K FDSNCITPGT FM L+ CL YYI DRLNND
Sbjct: 127 EAAVEKQRVREEILAKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIADRLNND 185
Query: 211 PGWKGIKVILSDANVP 226
PGWK + VILSDA+ P
Sbjct: 186 PGWKNLTVILSDASAP 201
>gi|351715914|gb|EHB18833.1| 5'-3' exoribonuclease 2 [Heterocephalus glaber]
Length = 950
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 134/196 (68%), Positives = 147/196 (75%), Gaps = 20/196 (10%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
P+E NG KIP D+SKPNPN +EFDNLYLDMNGIIHPCTHPEDKPAPK+EDEMMVAIFE I
Sbjct: 26 PKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIFEYI 85
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
DRLF IVRPR+LLYMAIDGVAPRAKMNQ RSRRFRASKE
Sbjct: 86 DRLFNIVRPRRLLYMAIDGVAPRAKMNQ-------------------QRSRRFRASKEGM 126
Query: 151 EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
E E R+RE+++A G LPPE+ K FDSNCITPGT FM L+ CL YYI DRLNND
Sbjct: 127 EAAIEKQRVREEIMAKGGYLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIADRLNND 185
Query: 211 PGWKGIKVILSDANVP 226
PGWK + VILSDA+ P
Sbjct: 186 PGWKNLTVILSDASAP 201
>gi|126303629|ref|XP_001373979.1| PREDICTED: 5'-3' exoribonuclease 2 [Monodelphis domestica]
Length = 947
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 134/196 (68%), Positives = 147/196 (75%), Gaps = 20/196 (10%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
P+E NG KIP D+SKPNPN +EFDNLYLDMNGIIHPCTHPEDKPAPK+EDEMMVAIFE I
Sbjct: 26 PKECNGVKIPVDTSKPNPNEVEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIFEYI 85
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
DRLF IVRPR+LLYMAIDGVAPRAKMNQ RSRRFRASKE
Sbjct: 86 DRLFNIVRPRRLLYMAIDGVAPRAKMNQ-------------------QRSRRFRASKEGM 126
Query: 151 EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
E E R+RE++L+ G LPPE+ K FDSNCITPGT FM L+ CL YYI DRLNND
Sbjct: 127 ESTIEKQRVREEILSKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIADRLNND 185
Query: 211 PGWKGIKVILSDANVP 226
PGWK + VILSDA+ P
Sbjct: 186 PGWKNLTVILSDASAP 201
>gi|33337899|gb|AAQ13577.1|AF152169_1 DHP protein [Homo sapiens]
Length = 950
Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 134/196 (68%), Positives = 146/196 (74%), Gaps = 20/196 (10%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
P+E NG KIP D+SKPNPN +EFDNLYLDMNGIIHPCTHPEDKPAPK+EDEMMVAIFE I
Sbjct: 26 PKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIFEYI 85
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
DRLF IVRPR+LLYMAIDGVAPR KMNQ RSRRFRASKE
Sbjct: 86 DRLFSIVRPRRLLYMAIDGVAPRVKMNQ-------------------QRSRRFRASKEGM 126
Query: 151 EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
E E R+RE++LA G LPPE+ K FDSNCITPGT FM L+ CL YYI DRLNND
Sbjct: 127 EAAVEKQRVREEILAKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIADRLNND 185
Query: 211 PGWKGIKVILSDANVP 226
PGWK + VILSDA+ P
Sbjct: 186 PGWKNLTVILSDASAP 201
>gi|327270678|ref|XP_003220116.1| PREDICTED: 5'-3' exoribonuclease 2-like [Anolis carolinensis]
Length = 957
Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 133/196 (67%), Positives = 146/196 (74%), Gaps = 20/196 (10%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
P+E NG KIP D+SKPNPN +EFDNLYLDMNGIIHPCTHPEDKPAPK+EDEMMVAIFE I
Sbjct: 26 PKECNGVKIPVDTSKPNPNEVEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIFEYI 85
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
DRLF IVRPR+LLYMAIDGVAPRAKMNQ RSRRFRASKE
Sbjct: 86 DRLFNIVRPRRLLYMAIDGVAPRAKMNQ-------------------QRSRRFRASKEGV 126
Query: 151 EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
E E RIRE+++ G LPPE+ K FDSNCITPGT FM L+ CL YY+ DRLNND
Sbjct: 127 EGAEEKQRIREEIMRKGGFLPPEEVK-ERFDSNCITPGTEFMDNLAKCLRYYVADRLNND 185
Query: 211 PGWKGIKVILSDANVP 226
PGWK + VILSDA+ P
Sbjct: 186 PGWKNLTVILSDASAP 201
>gi|440911591|gb|ELR61240.1| 5'-3' exoribonuclease 2, partial [Bos grunniens mutus]
Length = 926
Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 135/196 (68%), Positives = 147/196 (75%), Gaps = 20/196 (10%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
P+E NG KIP D+SKPNPN +EFDNLYLDMNGIIHPCTHPEDKPAPK+EDEMMVAIFE I
Sbjct: 1 PKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIFEYI 60
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
DRLF IVRPR+LLYMAIDGVAPRAKMNQ RSRRFRASKE
Sbjct: 61 DRLFNIVRPRRLLYMAIDGVAPRAKMNQ-------------------QRSRRFRASKEGM 101
Query: 151 EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
E E R+RE++LA G LPPE+ K FDSNCITPGT FM L+ CL YYI DRLNND
Sbjct: 102 EAEIEKQRVREEILAKGGYLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIADRLNND 160
Query: 211 PGWKGIKVILSDANVP 226
PGWK + VILSDA+ P
Sbjct: 161 PGWKNLTVILSDASAP 176
>gi|300794747|ref|NP_001179401.1| 5'-3' exoribonuclease 2 [Bos taurus]
gi|296481414|tpg|DAA23529.1| TPA: 5'-3' exoribonuclease 2 [Bos taurus]
Length = 951
Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 135/196 (68%), Positives = 147/196 (75%), Gaps = 20/196 (10%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
P+E NG KIP D+SKPNPN +EFDNLYLDMNGIIHPCTHPEDKPAPK+EDEMMVAIFE I
Sbjct: 26 PKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIFEYI 85
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
DRLF IVRPR+LLYMAIDGVAPRAKMNQ RSRRFRASKE
Sbjct: 86 DRLFNIVRPRRLLYMAIDGVAPRAKMNQ-------------------QRSRRFRASKEGM 126
Query: 151 EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
E E R+RE++LA G LPPE+ K FDSNCITPGT FM L+ CL YYI DRLNND
Sbjct: 127 EAEIEKQRVREEILAKGGYLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIADRLNND 185
Query: 211 PGWKGIKVILSDANVP 226
PGWK + VILSDA+ P
Sbjct: 186 PGWKNLTVILSDASAP 201
>gi|324502555|gb|ADY41124.1| 5'-3' exoribonuclease 2 [Ascaris suum]
Length = 934
Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 126/196 (64%), Positives = 148/196 (75%), Gaps = 19/196 (9%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
P++V+G IP +++PNPN EFDNLYLDMNGIIHPCTHPE++PAPK EDEM IFE I
Sbjct: 26 PRDVDGNLIPVRTTEPNPNFQEFDNLYLDMNGIIHPCTHPENRPAPKSEDEMFALIFEYI 85
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
DR+F +VRPR+LLYMAIDGVAPRAKMNQ RSRRFRASKE A
Sbjct: 86 DRIFAVVRPRRLLYMAIDGVAPRAKMNQ-------------------QRSRRFRASKEAA 126
Query: 151 EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
EK+ ++A +RE+L +G LPP+KE+G HFDSNCITPGTPFMA L+ L YY+H RLNND
Sbjct: 127 EKLQQIAEVRERLEKEGFPLPPKKEEGEHFDSNCITPGTPFMARLADALRYYVHMRLNND 186
Query: 211 PGWKGIKVILSDANVP 226
PGW I+VILSDAN P
Sbjct: 187 PGWANIEVILSDANAP 202
>gi|395851965|ref|XP_003798517.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 1 [Otolemur garnettii]
Length = 951
Score = 264 bits (674), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 134/195 (68%), Positives = 147/195 (75%), Gaps = 20/195 (10%)
Query: 32 QEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECID 91
+E NG KIP D+SKPNPN +EFDNLYLDMNGIIHPCTHPEDKPAPK+EDEMMVAIFE ID
Sbjct: 27 KECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIFEYID 86
Query: 92 RLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAE 151
RLF IVRPR+LLYMAIDGVAPRAKMNQ RSRRFRASKE E
Sbjct: 87 RLFNIVRPRRLLYMAIDGVAPRAKMNQ-------------------QRSRRFRASKEGME 127
Query: 152 KIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDP 211
E R+RE++LA G LPPE+ K FDSNCITPGT FM L+ CL YYI DRLNNDP
Sbjct: 128 AALEKQRVREEILAKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDP 186
Query: 212 GWKGIKVILSDANVP 226
GW+ + VILSDA+VP
Sbjct: 187 GWENLTVILSDASVP 201
>gi|301620220|ref|XP_002939479.1| PREDICTED: 5'-3' exoribonuclease 2 [Xenopus (Silurana) tropicalis]
gi|89271859|emb|CAJ82319.1| 5'-3' exoribonuclease 2 [Xenopus (Silurana) tropicalis]
Length = 931
Score = 263 bits (672), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 135/201 (67%), Positives = 149/201 (74%), Gaps = 20/201 (9%)
Query: 26 SLVSLPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVA 85
S+ P+E N KIP D++KPNPN +EFDNLYLDMNGIIHPCTHPEDKPAPK+EDEMMVA
Sbjct: 21 SVEEKPKECNNIKIPVDTTKPNPNEVEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVA 80
Query: 86 IFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRA 145
IFE IDRLF IVRPR+LLYMAIDGVAPRAKMNQ RSRRFRA
Sbjct: 81 IFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQ-------------------QRSRRFRA 121
Query: 146 SKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHD 205
SKE E E RIRE++L+ G LPPE+ K FDSNCITPGT FM L+ CL YYI D
Sbjct: 122 SKEGVESSEEKQRIREEVLSKGGYLPPEEVK-ERFDSNCITPGTEFMDNLAKCLRYYIAD 180
Query: 206 RLNNDPGWKGIKVILSDANVP 226
RLNNDPGWK + VILSDA+VP
Sbjct: 181 RLNNDPGWKNLTVILSDASVP 201
>gi|387015832|gb|AFJ50035.1| 5'-3' exoribonuclease 2-like [Crotalus adamanteus]
Length = 945
Score = 263 bits (672), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 132/195 (67%), Positives = 146/195 (74%), Gaps = 20/195 (10%)
Query: 32 QEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECID 91
+E NG KIP D+SKPNPN +EFDNLYLDMNGIIHPCTHPEDKPAPK+EDEMMVAIFE ID
Sbjct: 27 KEYNGIKIPVDTSKPNPNEVEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIFEYID 86
Query: 92 RLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAE 151
RLF IVRPR+LLYMAIDGVAPRAKMNQ RSRRFRASKE E
Sbjct: 87 RLFNIVRPRRLLYMAIDGVAPRAKMNQ-------------------QRSRRFRASKEGME 127
Query: 152 KIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDP 211
+ E RIR++++ G LPPE+ K FDSNCITPGT FM L+ CL YYI DRLNNDP
Sbjct: 128 SVEEKQRIRQEIMEKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDP 186
Query: 212 GWKGIKVILSDANVP 226
GWK + VILSDA+ P
Sbjct: 187 GWKNLTVILSDASAP 201
>gi|83759101|gb|AAI10279.1| XRN2 protein [Bos taurus]
Length = 422
Score = 263 bits (671), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 134/196 (68%), Positives = 147/196 (75%), Gaps = 20/196 (10%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
P+E NG KIP D+SKPNPN +EFDN+YLDMNGIIHPCTHPEDKPAPK+EDEMMVAIFE I
Sbjct: 26 PKECNGVKIPVDASKPNPNDVEFDNMYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIFEYI 85
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
DRLF IVRPR+LLYMAIDGVAPRAKMNQ RSRRFRASKE
Sbjct: 86 DRLFNIVRPRRLLYMAIDGVAPRAKMNQ-------------------QRSRRFRASKEGM 126
Query: 151 EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
E E R+RE++LA G LPPE+ K FDSNCITPGT FM L+ CL YYI DRLNND
Sbjct: 127 EAEIEKQRVREEILAKGGYLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIADRLNND 185
Query: 211 PGWKGIKVILSDANVP 226
PGWK + VILSDA+ P
Sbjct: 186 PGWKNLTVILSDASAP 201
>gi|1060921|dbj|BAA07524.1| Dhm1 protein [Mus musculus]
Length = 947
Score = 261 bits (668), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 133/196 (67%), Positives = 145/196 (73%), Gaps = 20/196 (10%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
P+E NG KIP D+SKPNPN +EFDNLYLDMNGIIHPCTHPEDKPAPK+EDEMMVAIFE I
Sbjct: 26 PKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIFEYI 85
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
DRLF IVRPR+LLYMAIDGVAPRAKMNQ RSRRFRA K
Sbjct: 86 DRLFNIVRPRRLLYMAIDGVAPRAKMNQ-------------------QRSRRFRAIKGGM 126
Query: 151 EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
E E R+RE++LA G LPPE+ K FDSNCITPGT FM L+ CL YYI DRLNND
Sbjct: 127 EAAVEKQRVREEILAKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIADRLNND 185
Query: 211 PGWKGIKVILSDANVP 226
PGWK + VILSDA+ P
Sbjct: 186 PGWKNLTVILSDASAP 201
>gi|5881961|gb|AAD55138.1|AF064257_1 Dhm1-like protein [Homo sapiens]
Length = 950
Score = 260 bits (664), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 132/196 (67%), Positives = 144/196 (73%), Gaps = 20/196 (10%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
P+E NG KIP D+SKPNPN +EFDNLYLDMNGIIHPCTHPEDKPAPK+EDEMMVAIFE I
Sbjct: 26 PKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIFEYI 85
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
DRLF IVRPR+LLYMAIDGVAPR KMNQ RSRRFRA K
Sbjct: 86 DRLFSIVRPRRLLYMAIDGVAPRVKMNQ-------------------QRSRRFRAIKRGM 126
Query: 151 EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
E E R+RE++LA G LPPE+ K FDSNCITPGT FM L+ CL YYI DRLNND
Sbjct: 127 EAAVEKQRVREEILAKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIADRLNND 185
Query: 211 PGWKGIKVILSDANVP 226
PGWK + VILSDA+ P
Sbjct: 186 PGWKNLTVILSDASAP 201
>gi|147899710|ref|NP_001091411.1| 5'-3' exoribonuclease 2 [Xenopus laevis]
gi|126631948|gb|AAI33744.1| LOC100049102 protein [Xenopus laevis]
Length = 457
Score = 259 bits (663), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 133/196 (67%), Positives = 147/196 (75%), Gaps = 20/196 (10%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
P+E N KIP D++KPNPN +EFDNLYLDMNGIIHPCTHPEDKPAPK+EDEMMVAIFE I
Sbjct: 26 PKECNNIKIPVDTTKPNPNEVEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIFEYI 85
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
DRLF IVRPR+LLYMAIDGVAPRAKMNQ RSRRFRASKE
Sbjct: 86 DRLFNIVRPRRLLYMAIDGVAPRAKMNQ-------------------QRSRRFRASKEGV 126
Query: 151 EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
E + E RIRE++L+ G LP E+ K FDSNCITPGT FM L+ CL YYI DRLNND
Sbjct: 127 ESVEEKNRIREEVLSKGGYLPKEEMK-ERFDSNCITPGTEFMDNLAKCLRYYIADRLNND 185
Query: 211 PGWKGIKVILSDANVP 226
PGWK + VILSDA+VP
Sbjct: 186 PGWKNLTVILSDASVP 201
>gi|449269264|gb|EMC80058.1| 5'-3' exoribonuclease 2, partial [Columba livia]
Length = 914
Score = 259 bits (663), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 130/195 (66%), Positives = 147/195 (75%), Gaps = 20/195 (10%)
Query: 32 QEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECID 91
+E NG K+P D+SKPNPN +EFDNLYLDMNGIIHPCTHPEDKPAPK+EDEMMVAIFE ID
Sbjct: 3 KECNGVKVPIDTSKPNPNEVEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIFEYID 62
Query: 92 RLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAE 151
R+F IVRPR+LLYMAIDGVAPRAKMNQ RSRRFRASKE E
Sbjct: 63 RIFNIVRPRRLLYMAIDGVAPRAKMNQ-------------------QRSRRFRASKEGME 103
Query: 152 KIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDP 211
E +IR+++L+ G ILPPE+ K FDSNCITPGT FM L+ CL YYI DRLN+DP
Sbjct: 104 AAEEKQKIRQEILSKGGILPPEEVK-ERFDSNCITPGTEFMDNLAKCLRYYIADRLNSDP 162
Query: 212 GWKGIKVILSDANVP 226
GWK + VILSDA+ P
Sbjct: 163 GWKNLTVILSDASAP 177
>gi|340375702|ref|XP_003386373.1| PREDICTED: 5'-3' exoribonuclease 2-like [Amphimedon queenslandica]
Length = 1066
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 121/195 (62%), Positives = 148/195 (75%), Gaps = 19/195 (9%)
Query: 32 QEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECID 91
+++ G +P D++ PNPN +EFDNLYLDMNGIIHPC HPEDKPAP+ EDEMMVAIFE ID
Sbjct: 27 KKLQGIDVPIDATLPNPNEVEFDNLYLDMNGIIHPCCHPEDKPAPETEDEMMVAIFEYID 86
Query: 92 RLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAE 151
R+F IVRPR+L+YMAIDGVAPRAKMNQ RSRRFR++KE+ +
Sbjct: 87 RIFNIVRPRRLVYMAIDGVAPRAKMNQ-------------------QRSRRFRSAKESVD 127
Query: 152 KIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDP 211
K+ E+ ++R++L G LPP K +HFDSNCITPGT FMA L+ CL YYIHDR+N++P
Sbjct: 128 KLEEIKKVRQELAERGVGLPPLKPDSAHFDSNCITPGTQFMANLAICLQYYIHDRMNHNP 187
Query: 212 GWKGIKVILSDANVP 226
WKG+KVILSDANVP
Sbjct: 188 AWKGLKVILSDANVP 202
>gi|71895763|ref|NP_001026204.1| 5'-3' exoribonuclease 2 [Gallus gallus]
gi|75571238|sp|Q5ZIP4.1|XRN2_CHICK RecName: Full=5'-3' exoribonuclease 2
gi|53135140|emb|CAG32399.1| hypothetical protein RCJMB04_24h23 [Gallus gallus]
Length = 949
Score = 255 bits (652), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 130/195 (66%), Positives = 145/195 (74%), Gaps = 20/195 (10%)
Query: 32 QEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECID 91
+E NG K D+SKPNPN +EFDNLYLDMNGIIHPCTHPEDKPAPK+EDEMMVAIFE ID
Sbjct: 27 KECNGVKASVDTSKPNPNEVEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIFEYID 86
Query: 92 RLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAE 151
R+F IVRPR+LLYMAIDGVAPRAKMNQ RSRRFRASKE E
Sbjct: 87 RIFNIVRPRRLLYMAIDGVAPRAKMNQ-------------------QRSRRFRASKEGME 127
Query: 152 KIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDP 211
E +IR+++LA G ILPPE+ K FDSNCITPGT FM L+ CL YYI DRLN+DP
Sbjct: 128 AAEEKQKIRQEILAKGGILPPEEVK-ERFDSNCITPGTEFMDNLAKCLRYYIADRLNSDP 186
Query: 212 GWKGIKVILSDANVP 226
GWK + VILSDA+ P
Sbjct: 187 GWKNLTVILSDASAP 201
>gi|348518303|ref|XP_003446671.1| PREDICTED: 5'-3' exoribonuclease 2 [Oreochromis niloticus]
Length = 982
Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 127/195 (65%), Positives = 146/195 (74%), Gaps = 20/195 (10%)
Query: 32 QEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECID 91
+E NG +IP D++KPNPN +EFDNLYLDMNGIIHPCTHPEDKPAPK+EDEMMVAIFE ID
Sbjct: 27 KECNGVRIPVDTTKPNPNEVEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIFEYID 86
Query: 92 RLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAE 151
RLF IVRPR++LYMAIDGVAPRAKMNQ RSRRFRASKE E
Sbjct: 87 RLFNIVRPRRVLYMAIDGVAPRAKMNQ-------------------QRSRRFRASKEGVE 127
Query: 152 KIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDP 211
+ E +R+RE+++ G LPPE+ K FDSNCITPGT FM L+ CL YY+ +RL NDP
Sbjct: 128 LVEEKSRVREEVIQKGGYLPPEEIK-ERFDSNCITPGTEFMDNLAQCLRYYVAERLTNDP 186
Query: 212 GWKGIKVILSDANVP 226
GWK I V LSDA+VP
Sbjct: 187 GWKNIVVFLSDASVP 201
>gi|326914793|ref|XP_003203707.1| PREDICTED: 5'-3' exoribonuclease 2-like [Meleagris gallopavo]
Length = 985
Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 129/195 (66%), Positives = 145/195 (74%), Gaps = 20/195 (10%)
Query: 32 QEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECID 91
+E NG K D+S+PNPN +EFDNLYLDMNGIIHPCTHPEDKPAPK+EDEMMVAIFE ID
Sbjct: 28 KECNGVKASVDTSRPNPNEVEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIFEYID 87
Query: 92 RLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAE 151
R+F IVRPR+LLYMAIDGVAPRAKMNQ RSRRFRASKE E
Sbjct: 88 RIFNIVRPRRLLYMAIDGVAPRAKMNQ-------------------QRSRRFRASKEGME 128
Query: 152 KIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDP 211
E +IR+++LA G ILPPE+ K FDSNCITPGT FM L+ CL YYI DRLN+DP
Sbjct: 129 AAEEKQKIRQEILAKGGILPPEEVK-ERFDSNCITPGTEFMDNLAKCLRYYIADRLNSDP 187
Query: 212 GWKGIKVILSDANVP 226
GWK + VILSDA+ P
Sbjct: 188 GWKNLTVILSDASAP 202
>gi|339249025|ref|XP_003373500.1| 5'-3' exoribonuclease 2 [Trichinella spiralis]
gi|316970366|gb|EFV54322.1| 5'-3' exoribonuclease 2 [Trichinella spiralis]
Length = 820
Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 124/196 (63%), Positives = 144/196 (73%), Gaps = 19/196 (9%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
P++V+G +P D+++PNP+G+EFD YLDMNGIIHPC HPEDKPAPK E+EMMVAIFE I
Sbjct: 26 PRDVDGTTVPVDNTQPNPHGIEFDTFYLDMNGIIHPCCHPEDKPAPKSEEEMMVAIFEYI 85
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
DRL IVRPR+LLYMAIDGVAPRAKMNQ R+RRFRASKE A
Sbjct: 86 DRLMCIVRPRRLLYMAIDGVAPRAKMNQ-------------------QRTRRFRASKEAA 126
Query: 151 EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
EK ++ +IRE L A G LP E HFDSNCITPGTPFMA L+ CL YYIH+RLN D
Sbjct: 127 EKEEQIRQIREDLRAQGIPLPAESTDKQHFDSNCITPGTPFMARLAICLRYYIHERLNTD 186
Query: 211 PGWKGIKVILSDANVP 226
P W+ + VILSDA+VP
Sbjct: 187 PAWQNLLVILSDASVP 202
>gi|301069399|ref|NP_001001944.2| 5'-3' exoribonuclease 2 [Danio rerio]
Length = 952
Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 128/195 (65%), Positives = 144/195 (73%), Gaps = 20/195 (10%)
Query: 32 QEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECID 91
+E NG KIP D+SKPNPN +EFDNLYLDMNGIIHPCTHPEDKPAPK+EDEMMVAIFE ID
Sbjct: 27 KEYNGVKIPVDTSKPNPNEVEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIFEYID 86
Query: 92 RLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAE 151
RLF IVRPR++LYMAIDGVAPRAKMNQ RSRRFRASKE E
Sbjct: 87 RLFNIVRPRRVLYMAIDGVAPRAKMNQ-------------------QRSRRFRASKEGVE 127
Query: 152 KIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDP 211
E ++RE+++ G LPPE+ K FDSNCITPGT FM L+ CL YY+ DRL NDP
Sbjct: 128 LAEEKQKMREEVIERGGYLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYVADRLTNDP 186
Query: 212 GWKGIKVILSDANVP 226
GW+ I V LSDA+VP
Sbjct: 187 GWRNITVFLSDASVP 201
>gi|391327300|ref|XP_003738141.1| PREDICTED: 5'-3' exoribonuclease 2 homolog [Metaseiulus
occidentalis]
Length = 960
Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 130/190 (68%), Positives = 148/190 (77%), Gaps = 19/190 (10%)
Query: 37 QKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRI 96
Q++ D+SKPNPN +EFDNLYLDMNGIIHPC HPE+KPAPK+EDEMMVAIFE IDR+F I
Sbjct: 33 QRVNIDTSKPNPNNVEFDNLYLDMNGIIHPCCHPENKPAPKNEDEMMVAIFEYIDRIFSI 92
Query: 97 VRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEV 156
+RPR+LLYMAIDGVAPRAKMNQ RSRRFRASKE AEK A +
Sbjct: 93 IRPRRLLYMAIDGVAPRAKMNQ-------------------QRSRRFRASKEAAEKAATI 133
Query: 157 ARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGI 216
+R+R +L + G LPPEK HFD+NCITPGTPFM L+ CLHYYIHDRLNNDPGW+ I
Sbjct: 134 SRLRRELQSKGFHLPPEKAPEDHFDTNCITPGTPFMDRLAKCLHYYIHDRLNNDPGWQNI 193
Query: 217 KVILSDANVP 226
+VILSDANVP
Sbjct: 194 EVILSDANVP 203
>gi|170593371|ref|XP_001901438.1| 5'-3' exoribonuclease 2 [Brugia malayi]
gi|158591505|gb|EDP30118.1| 5'-3' exoribonuclease 2, putative [Brugia malayi]
Length = 937
Score = 253 bits (647), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 124/196 (63%), Positives = 145/196 (73%), Gaps = 20/196 (10%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
P+++NG ++P ++ PNPN EFDNLYLDMNGIIHPCTHPED+P PK E+EM + IFE I
Sbjct: 26 PRDLNGIRVPVNTVDPNPNFQEFDNLYLDMNGIIHPCTHPEDRPCPKTEEEMFMLIFEYI 85
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
DRLF IVRPRKLLYMA+DGVAPRAKMNQ RSRRFRASKE
Sbjct: 86 DRLFAIVRPRKLLYMAVDGVAPRAKMNQ-------------------QRSRRFRASKEAI 126
Query: 151 EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
EK+ ++A R +L ++G LPPEK K HFDSNCITPGTPFMA L+ L YY+H RLN+D
Sbjct: 127 EKVEQIAETRLRLESEGYPLPPEK-KTEHFDSNCITPGTPFMARLAVALRYYVHQRLNSD 185
Query: 211 PGWKGIKVILSDANVP 226
PGW+ I VILSDANVP
Sbjct: 186 PGWRKIAVILSDANVP 201
>gi|28503006|gb|AAH47182.1| 5'-3' exoribonuclease 2 [Danio rerio]
gi|182889854|gb|AAI65726.1| Xrn2 protein [Danio rerio]
Length = 540
Score = 253 bits (646), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 128/195 (65%), Positives = 144/195 (73%), Gaps = 20/195 (10%)
Query: 32 QEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECID 91
+E NG KIP D+SKPNPN +EFDNLYLDMNGIIHPCTHPEDKPAPK+EDEMMVAIFE ID
Sbjct: 27 KEYNGVKIPVDTSKPNPNEVEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIFEYID 86
Query: 92 RLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAE 151
RLF IVRPR++LYMAIDGVAPRAKMNQ RSRRFRASKE E
Sbjct: 87 RLFNIVRPRRVLYMAIDGVAPRAKMNQ-------------------QRSRRFRASKEGVE 127
Query: 152 KIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDP 211
E ++RE+++ G LPPE+ K FDSNCITPGT FM L+ CL YY+ DRL NDP
Sbjct: 128 LAEEKQKMREEVIERGGYLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYVADRLTNDP 186
Query: 212 GWKGIKVILSDANVP 226
GW+ I V LSDA+VP
Sbjct: 187 GWRNITVFLSDASVP 201
>gi|410916005|ref|XP_003971477.1| PREDICTED: 5'-3' exoribonuclease 2-like [Takifugu rubripes]
Length = 992
Score = 253 bits (646), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 126/195 (64%), Positives = 146/195 (74%), Gaps = 20/195 (10%)
Query: 32 QEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECID 91
+E NG +IP D+++PNPN +EFDNLYLDMNGIIHPCTHPEDK APK+EDEMMVAIFE ID
Sbjct: 27 KECNGVRIPVDTTRPNPNEVEFDNLYLDMNGIIHPCTHPEDKAAPKNEDEMMVAIFEYID 86
Query: 92 RLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAE 151
RLF IVRPR++LYMAIDGVAPRAKMNQ RSRRFRASKE AE
Sbjct: 87 RLFNIVRPRRVLYMAIDGVAPRAKMNQ-------------------QRSRRFRASKEGAE 127
Query: 152 KIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDP 211
+ + RIRE+++ G LPPE+ K FDSNCITPGT FM L+ CL YYI DRLNN+P
Sbjct: 128 LVEDKKRIREEVIQRGGYLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIADRLNNNP 186
Query: 212 GWKGIKVILSDANVP 226
GW+ + V LSDA+VP
Sbjct: 187 GWRNVTVFLSDASVP 201
>gi|432946152|ref|XP_004083793.1| PREDICTED: 5'-3' exoribonuclease 2-like [Oryzias latipes]
Length = 972
Score = 253 bits (646), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 126/195 (64%), Positives = 146/195 (74%), Gaps = 20/195 (10%)
Query: 32 QEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECID 91
+E NG +IP D++KPNPN +EFDNLYLDMNGIIHPCTHPEDKPAPK+EDEMMVAIFE ID
Sbjct: 27 KECNGVRIPVDTTKPNPNEVEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIFEYID 86
Query: 92 RLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAE 151
RLF IVRPR++LYMAIDGVAPRAKMNQ RSRRFRASKE E
Sbjct: 87 RLFNIVRPRRVLYMAIDGVAPRAKMNQ-------------------QRSRRFRASKEGVE 127
Query: 152 KIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDP 211
+ E R+RE+++ G LPPE+ K FDSNCITPGT FM L+ CL YY+ +RL+NDP
Sbjct: 128 LVDEKQRMREEIIQRGGYLPPEEIK-ERFDSNCITPGTEFMDNLAHCLRYYVAERLSNDP 186
Query: 212 GWKGIKVILSDANVP 226
GWK + V LSDA+VP
Sbjct: 187 GWKNVVVFLSDASVP 201
>gi|355563402|gb|EHH19964.1| 5'-3' exoribonuclease 2 [Macaca mulatta]
Length = 926
Score = 253 bits (645), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 128/186 (68%), Positives = 139/186 (74%), Gaps = 20/186 (10%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
P+E NG KIP D+SKPNPN +EFDNLYLDMNGIIHPCTHPEDKPAPK+EDEMMVAIFE I
Sbjct: 26 PKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIFEYI 85
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
DRLF IVRPR+LLYMAIDGVAPRAKMNQ RSRRFRASKE
Sbjct: 86 DRLFSIVRPRRLLYMAIDGVAPRAKMNQ-------------------QRSRRFRASKEGM 126
Query: 151 EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
E E R+RE++LA G LPPE+ K FDSNCITPGT FM L+ CL YYI DRLNND
Sbjct: 127 EAAVEKQRVREEILAKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIADRLNND 185
Query: 211 PGWKGI 216
PGWK +
Sbjct: 186 PGWKNL 191
>gi|259016407|sp|Q60SG7.2|XRN2_CAEBR RecName: Full=5'-3' exoribonuclease 2 homolog
Length = 976
Score = 253 bits (645), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 123/195 (63%), Positives = 145/195 (74%), Gaps = 21/195 (10%)
Query: 34 VNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRL 93
V+G+++P D ++PNPN EFDNLYLDMNGIIHPCTHPED+PAPK+EDEM IFE IDR+
Sbjct: 29 VDGRRVPVDCTQPNPNFQEFDNLYLDMNGIIHPCTHPEDRPAPKNEDEMFALIFEYIDRI 88
Query: 94 FRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKI 153
F IVRPR+LLYMAIDGVAPRAKMNQ RSRRFRASKE AEK
Sbjct: 89 FSIVRPRRLLYMAIDGVAPRAKMNQ-------------------QRSRRFRASKEMAEKA 129
Query: 154 AEVARIREKLLADGCILPPEK--EKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDP 211
A + R +L+A+G +P +K E+ +HFDSNCITPGTPFMA L+ L YYIHDR+ NDP
Sbjct: 130 ASIEEQRRRLIAEGIAVPQKKKDEEEAHFDSNCITPGTPFMARLADALRYYIHDRVTNDP 189
Query: 212 GWKGIKVILSDANVP 226
W I++ILSDANVP
Sbjct: 190 AWANIEIILSDANVP 204
>gi|268533146|ref|XP_002631701.1| C. briggsae CBR-XRN-2 protein [Caenorhabditis briggsae]
Length = 901
Score = 252 bits (644), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 123/195 (63%), Positives = 145/195 (74%), Gaps = 21/195 (10%)
Query: 34 VNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRL 93
V+G+++P D ++PNPN EFDNLYLDMNGIIHPCTHPED+PAPK+EDEM IFE IDR+
Sbjct: 29 VDGRRVPVDCTQPNPNFQEFDNLYLDMNGIIHPCTHPEDRPAPKNEDEMFALIFEYIDRI 88
Query: 94 FRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKI 153
F IVRPR+LLYMAIDGVAPRAKMNQ RSRRFRASKE AEK
Sbjct: 89 FSIVRPRRLLYMAIDGVAPRAKMNQ-------------------QRSRRFRASKEMAEKA 129
Query: 154 AEVARIREKLLADGCILPPEK--EKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDP 211
A + R +L+A+G +P +K E+ +HFDSNCITPGTPFMA L+ L YYIHDR+ NDP
Sbjct: 130 ASIEEQRRRLIAEGIAVPQKKKDEEEAHFDSNCITPGTPFMARLADALRYYIHDRVTNDP 189
Query: 212 GWKGIKVILSDANVP 226
W I++ILSDANVP
Sbjct: 190 AWANIEIILSDANVP 204
>gi|212645622|ref|NP_496958.2| Protein XRN-2 [Caenorhabditis elegans]
gi|218511968|sp|Q9U299.2|XRN2_CAEEL RecName: Full=5'-3' exoribonuclease 2 homolog
gi|189309813|emb|CAB54449.2| Protein XRN-2 [Caenorhabditis elegans]
Length = 975
Score = 252 bits (644), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 120/195 (61%), Positives = 145/195 (74%), Gaps = 19/195 (9%)
Query: 32 QEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECID 91
++ +G ++P D ++PNPN EFDNLYLDMNGIIHPCTHPED+PAPK+EDEM IFE ID
Sbjct: 27 RDQDGNRVPVDCTQPNPNFQEFDNLYLDMNGIIHPCTHPEDRPAPKNEDEMFALIFEYID 86
Query: 92 RLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAE 151
R++ IVRPR+LLYMAIDGVAPRAKMNQ RSRRFRASKE AE
Sbjct: 87 RIYSIVRPRRLLYMAIDGVAPRAKMNQ-------------------QRSRRFRASKEMAE 127
Query: 152 KIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDP 211
K A + R +L+A+G +PP+K++ +HFDSNCITPGTPFMA L+ L YYIHDR+ ND
Sbjct: 128 KEASIEEQRNRLMAEGIAVPPKKKEEAHFDSNCITPGTPFMARLADALRYYIHDRVTNDA 187
Query: 212 GWKGIKVILSDANVP 226
W I++ILSDANVP
Sbjct: 188 SWANIEIILSDANVP 202
>gi|390354844|ref|XP_795068.3| PREDICTED: 5'-3' exoribonuclease 2 isoform 2 [Strongylocentrotus
purpuratus]
Length = 999
Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 126/195 (64%), Positives = 144/195 (73%), Gaps = 19/195 (9%)
Query: 32 QEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECID 91
+EV+ +IP D+++PNPN +EFDNLYLDMNGIIHPC HPE+KPAPKDEDEMM IF ID
Sbjct: 27 KEVDEVRIPVDTTQPNPNDVEFDNLYLDMNGIIHPCCHPENKPAPKDEDEMMREIFLYID 86
Query: 92 RLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAE 151
RL IVRPR+LLYMAIDGVAPRAKMNQ RSRRFRASKE+ +
Sbjct: 87 RLISIVRPRRLLYMAIDGVAPRAKMNQ-------------------QRSRRFRASKESRD 127
Query: 152 KIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDP 211
K ++ARIR ++ G LPP K K SHFDSNCITPGT FM L+ CL YYI +RLN+DP
Sbjct: 128 KRQDIARIRAEIADRGGYLPPPKAKESHFDSNCITPGTEFMFRLADCLRYYITERLNSDP 187
Query: 212 GWKGIKVILSDANVP 226
GWK IKVILSDAN P
Sbjct: 188 GWKDIKVILSDANTP 202
>gi|390354842|ref|XP_003728421.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 1 [Strongylocentrotus
purpuratus]
Length = 1010
Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 126/195 (64%), Positives = 144/195 (73%), Gaps = 19/195 (9%)
Query: 32 QEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECID 91
+EV+ +IP D+++PNPN +EFDNLYLDMNGIIHPC HPE+KPAPKDEDEMM IF ID
Sbjct: 27 KEVDEVRIPVDTTQPNPNDVEFDNLYLDMNGIIHPCCHPENKPAPKDEDEMMREIFLYID 86
Query: 92 RLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAE 151
RL IVRPR+LLYMAIDGVAPRAKMNQ RSRRFRASKE+ +
Sbjct: 87 RLISIVRPRRLLYMAIDGVAPRAKMNQ-------------------QRSRRFRASKESRD 127
Query: 152 KIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDP 211
K ++ARIR ++ G LPP K K SHFDSNCITPGT FM L+ CL YYI +RLN+DP
Sbjct: 128 KRQDIARIRAEIADRGGYLPPPKAKESHFDSNCITPGTEFMFRLADCLRYYITERLNSDP 187
Query: 212 GWKGIKVILSDANVP 226
GWK IKVILSDAN P
Sbjct: 188 GWKDIKVILSDANTP 202
>gi|358342156|dbj|GAA49686.1| 5'-3' exoribonuclease 2 [Clonorchis sinensis]
Length = 314
Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 124/192 (64%), Positives = 140/192 (72%), Gaps = 19/192 (9%)
Query: 35 NGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLF 94
G + P D+++PNPNG EFDNLYLDMNGIIHPCTHPE KPAPK+E EM VAIFE IDRLF
Sbjct: 32 QGTRGPVDTTEPNPNGQEFDNLYLDMNGIIHPCTHPESKPAPKNEAEMFVAIFEYIDRLF 91
Query: 95 RIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIA 154
I+RPR++LYMAIDGVAPRAKMNQ RSRRFRA+KE EK
Sbjct: 92 AIIRPRRILYMAIDGVAPRAKMNQ-------------------QRSRRFRAAKEAKEKHM 132
Query: 155 EVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWK 214
+ R+R +L A G LPP K + HFDSNCITPGTPFMA L+ L YYI+DRLN+DPGWK
Sbjct: 133 TIERLRNELQARGAHLPPAKSEEEHFDSNCITPGTPFMARLAVALRYYIYDRLNSDPGWK 192
Query: 215 GIKVILSDANVP 226
I V LSDANVP
Sbjct: 193 NIMVFLSDANVP 204
>gi|431894120|gb|ELK03920.1| 5'-3' exoribonuclease 2 [Pteropus alecto]
Length = 1091
Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 137/234 (58%), Positives = 151/234 (64%), Gaps = 49/234 (20%)
Query: 22 YSFASLVSLPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDE 81
+S + V P+E NG KIP D+SKPNPN +EFDNLYLDMNGIIHPCTHPEDKPAPK+EDE
Sbjct: 129 WSTENDVWDPKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIHPCTHPEDKPAPKNEDE 188
Query: 82 MMVAIFECIDRLFRIVRPRKLLYMAIDGV-----------------------------AP 112
MMVAIFE IDRLF IVRPR+LLYMAIDGV AP
Sbjct: 189 MMVAIFEYIDRLFNIVRPRRLLYMAIDGVDKEYLEIDGQWKGMDGTDMGKEDLPDFSDAP 248
Query: 113 RAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCILPP 172
RAKMNQ RSRRFRASKE E E R+RE++LA G LPP
Sbjct: 249 RAKMNQ-------------------QRSRRFRASKEGMEAAVEKQRVREEILAKGGFLPP 289
Query: 173 EKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
E+ K FDSNCITPGT FM L+ CL YYI DRLNNDPGWK + VILSDA+ P
Sbjct: 290 EEIK-ERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDPGWKNLTVILSDASAP 342
>gi|308503096|ref|XP_003113732.1| CRE-XRN-2 protein [Caenorhabditis remanei]
gi|308263691|gb|EFP07644.1| CRE-XRN-2 protein [Caenorhabditis remanei]
Length = 988
Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 119/195 (61%), Positives = 144/195 (73%), Gaps = 19/195 (9%)
Query: 32 QEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECID 91
++ +G+++P D ++PNPN EFDNLYLDMNGIIHPCTHPED+P PK+EDEM IFE ID
Sbjct: 27 RDADGKRVPVDCTQPNPNFQEFDNLYLDMNGIIHPCTHPEDRPPPKNEDEMFALIFEYID 86
Query: 92 RLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAE 151
R++ IVRPR+LLYMAIDGVAPRAKMNQ RSRRFRASKE AE
Sbjct: 87 RIYSIVRPRRLLYMAIDGVAPRAKMNQ-------------------QRSRRFRASKEMAE 127
Query: 152 KIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDP 211
K A + R +L+A+G +PP K++ +HFDSNCITPGTPFMA L+ L YYIHDR+ ND
Sbjct: 128 KAASIEEQRNRLMAEGIAVPPPKKEEAHFDSNCITPGTPFMARLADALRYYIHDRVTNDA 187
Query: 212 GWKGIKVILSDANVP 226
W I++ILSDANVP
Sbjct: 188 SWANIEIILSDANVP 202
>gi|119630592|gb|EAX10187.1| 5'-3' exoribonuclease 2, isoform CRA_b [Homo sapiens]
Length = 979
Score = 250 bits (639), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 135/225 (60%), Positives = 147/225 (65%), Gaps = 49/225 (21%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
P+E NG KIP D+SKPNPN +EFDNLYLDMNGIIHPCTHPEDKPAPK+EDEMMVAIFE I
Sbjct: 26 PKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIFEYI 85
Query: 91 DRLFRIVRPRKLLYMAIDGV-----------------------------APRAKMNQPLT 121
DRLF IVRPR+LLYMAIDGV APRAKMNQ
Sbjct: 86 DRLFSIVRPRRLLYMAIDGVYCEILGMLATALAFELLAYCQREGGIDKWAPRAKMNQ--- 142
Query: 122 VYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFD 181
RSRRFRASKE E E R+RE++LA G LPPE+ K FD
Sbjct: 143 ----------------QRSRRFRASKEGMEAAVEKQRVREEILAKGGFLPPEEIK-ERFD 185
Query: 182 SNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
SNCITPGT FM L+ CL YYI DRLNNDPGWK + VILSDA+ P
Sbjct: 186 SNCITPGTEFMDNLAKCLRYYIADRLNNDPGWKNLTVILSDASAP 230
>gi|291242576|ref|XP_002741181.1| PREDICTED: 5-3 exoribonuclease 2-like [Saccoglossus kowalevskii]
Length = 965
Score = 249 bits (636), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 120/196 (61%), Positives = 144/196 (73%), Gaps = 19/196 (9%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
P+EV+G ++P + ++PNPN +EFDNLYLDMNGIIHPC HPE+KPAPK+EDEMM+AIFECI
Sbjct: 26 PKEVHGIQVPVNITEPNPNEIEFDNLYLDMNGIIHPCCHPENKPAPKNEDEMMLAIFECI 85
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
DRL RIVRPR+LLYMAIDGVAPRAKMNQ RSRRFR KE
Sbjct: 86 DRLMRIVRPRRLLYMAIDGVAPRAKMNQ-------------------QRSRRFRGPKEVR 126
Query: 151 EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
EK E+ +++E++L+ G LPP K FDSNCITPGT FM L+ CL YY+ +R+ D
Sbjct: 127 EKQVEIDKVKEEILSRGGTLPPPKPVSEKFDSNCITPGTEFMFRLADCLRYYVTERIMTD 186
Query: 211 PGWKGIKVILSDANVP 226
PGW +KVILSDANVP
Sbjct: 187 PGWSKVKVILSDANVP 202
>gi|224047545|ref|XP_002199834.1| PREDICTED: 5'-3' exoribonuclease 2 [Taeniopygia guttata]
Length = 949
Score = 248 bits (634), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 126/195 (64%), Positives = 143/195 (73%), Gaps = 20/195 (10%)
Query: 32 QEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECID 91
+E NG K+P D+SKPNPN +EFDNLYLDMNGIIHPCTHPEDKPAPK+EDEMMVAIFE ID
Sbjct: 27 KECNGVKVPIDTSKPNPNEVEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIFEYID 86
Query: 92 RLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAE 151
R+F IVR R+LLYMAID APRAKMNQ RSRRFRASKE E
Sbjct: 87 RIFNIVRQRRLLYMAIDXXAPRAKMNQ-------------------QRSRRFRASKEGME 127
Query: 152 KIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDP 211
E +IR+++LA G LPPE+ K FDSNCITPGT FM L+ CL YYI DRLN++P
Sbjct: 128 AAEEKQKIRQEILAKGGYLPPEEVK-ERFDSNCITPGTEFMDNLAKCLRYYIADRLNSNP 186
Query: 212 GWKGIKVILSDANVP 226
GWK + VILSDA+ P
Sbjct: 187 GWKNLTVILSDASAP 201
>gi|392884414|gb|AFM91039.1| 5'-3' exoribonuclease 2 [Callorhinchus milii]
Length = 952
Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 126/195 (64%), Positives = 143/195 (73%), Gaps = 20/195 (10%)
Query: 32 QEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECID 91
+EVNG KIP D+SKPNPN +EFDNLYLDMNGIIHPCTHPE+K APK+EDEMMVAIFE ID
Sbjct: 27 KEVNGVKIPVDTSKPNPNEVEFDNLYLDMNGIIHPCTHPENKAAPKNEDEMMVAIFEYID 86
Query: 92 RLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAE 151
RLF I+RPR+LLYMAIDGVAPRAKMNQ R RRFRASKE E
Sbjct: 87 RLFNILRPRRLLYMAIDGVAPRAKMNQ-------------------QRPRRFRASKEGVE 127
Query: 152 KIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDP 211
+AE R+RE++++ G L E K FD NCITPGT FM L+ L YY+ DRLNNDP
Sbjct: 128 LLAEKTRMREEVISKGGFLSEEVIK-ERFDGNCITPGTEFMDNLARSLRYYVADRLNNDP 186
Query: 212 GWKGIKVILSDANVP 226
GWK + VILSDA+VP
Sbjct: 187 GWKNLTVILSDASVP 201
>gi|198426685|ref|XP_002129696.1| PREDICTED: similar to 5-3 exoribonuclease 2 [Ciona intestinalis]
Length = 886
Score = 246 bits (629), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 123/195 (63%), Positives = 143/195 (73%), Gaps = 19/195 (9%)
Query: 32 QEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECID 91
+E++G IP D+S PNPN +EFDNLYLDMNGIIHPC+HPED+PAPK+E E+M+AIF+ ID
Sbjct: 27 KEIDGVTIPVDTSLPNPNDIEFDNLYLDMNGIIHPCSHPEDRPAPKNEQEIMIAIFDSID 86
Query: 92 RLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAE 151
RLF IVRPR++LYMAIDGVAPRAKMNQ RSRRFRASKE E
Sbjct: 87 RLFSIVRPRRVLYMAIDGVAPRAKMNQ-------------------QRSRRFRASKEGVE 127
Query: 152 KIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDP 211
+ A IR +LL +G LP K FDSNCITPGT FM L+ACL +YI DRLNNDP
Sbjct: 128 QTELKASIRAELLRNGMRLPEVDPKAERFDSNCITPGTEFMFRLAACLRFYIIDRLNNDP 187
Query: 212 GWKGIKVILSDANVP 226
GW+ I+VILSDANVP
Sbjct: 188 GWRNIEVILSDANVP 202
>gi|320163497|gb|EFW40396.1| 5'-3' exoribonuclease 2 [Capsaspora owczarzaki ATCC 30864]
Length = 1196
Score = 243 bits (619), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 119/193 (61%), Positives = 138/193 (71%), Gaps = 21/193 (10%)
Query: 34 VNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRL 93
+NG K+P D+S+PNPN EFDNLYLDMNG+IHPC HP D+P P EDEMMV IFE I+R+
Sbjct: 29 INGTKVPIDTSRPNPNQQEFDNLYLDMNGLIHPCCHPIDRPPPASEDEMMVLIFEYIERI 88
Query: 94 FRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKI 153
F IVRPRKL+YMAIDGVAPRAKMNQ RSRRFRA +E AE
Sbjct: 89 FAIVRPRKLVYMAIDGVAPRAKMNQ-------------------QRSRRFRAVREAAESA 129
Query: 154 AEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGW 213
++A +R KL ADG LP ++KG FDSNCITPGT FM L+ CL Y+IH +L DPGW
Sbjct: 130 TKLAELRAKLEADGVRLP--QKKGHKFDSNCITPGTEFMEQLAVCLRYFIHRKLMEDPGW 187
Query: 214 KGIKVILSDANVP 226
+ IKVILSDANVP
Sbjct: 188 QNIKVILSDANVP 200
>gi|256074378|ref|XP_002573502.1| 5'-3' exoribonuclease [Schistosoma mansoni]
gi|350644806|emb|CCD60472.1| 5'-3' exoribonuclease, putative [Schistosoma mansoni]
Length = 928
Score = 240 bits (613), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 120/192 (62%), Positives = 138/192 (71%), Gaps = 21/192 (10%)
Query: 35 NGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLF 94
+G + P D+S+PNPNG EFDNLYLDMNGIIHPCTHPE+KPAPK E EM AIFE IDRLF
Sbjct: 32 DGNRSPVDTSEPNPNGEEFDNLYLDMNGIIHPCTHPENKPAPKTESEMFAAIFEYIDRLF 91
Query: 95 RIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIA 154
IVRPR++LYMAIDGVAPRAKMNQ RSRRFRA++E EK
Sbjct: 92 SIVRPRRVLYMAIDGVAPRAKMNQ-------------------QRSRRFRAAQEAKEKQI 132
Query: 155 EVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWK 214
+ R+R +L+A G LPP KE+ HFDSNCITPGTPFM+ L+ L YI+ RL DPGWK
Sbjct: 133 TIERLRNELIARGAHLPPPKEE--HFDSNCITPGTPFMSRLAVALRGYIYTRLTKDPGWK 190
Query: 215 GIKVILSDANVP 226
+ V LSDANVP
Sbjct: 191 NLMVFLSDANVP 202
>gi|157111508|ref|XP_001651597.1| 5'-3' exoribonuclease, putative [Aedes aegypti]
gi|108868328|gb|EAT32553.1| AAEL015316-PA, partial [Aedes aegypti]
Length = 188
Score = 239 bits (610), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 128/178 (71%), Positives = 139/178 (78%), Gaps = 19/178 (10%)
Query: 35 NGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLF 94
+G + D ++PNPN +EFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRL
Sbjct: 30 HGNPLYDDMTQPNPNKVEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLM 89
Query: 95 RIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIA 154
IVRPRKLLYMAIDGVAPRAKMNQ RSRRFRASKE AEK A
Sbjct: 90 NIVRPRKLLYMAIDGVAPRAKMNQ-------------------QRSRRFRASKEAAEKAA 130
Query: 155 EVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPG 212
EV +IR++L A GCILPPEKEKG+HFDSNCITPGTPFM LS CL YY+HDR+NN G
Sbjct: 131 EVQKIRDELRAKGCILPPEKEKGAHFDSNCITPGTPFMDRLSKCLQYYVHDRMNNYRG 188
>gi|341884867|gb|EGT40802.1| hypothetical protein CAEBREN_29959 [Caenorhabditis brenneri]
Length = 992
Score = 239 bits (610), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 121/217 (55%), Positives = 142/217 (65%), Gaps = 44/217 (20%)
Query: 35 NGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLF 94
+G++ P D ++PNPN EFDNLYLDMNGIIHPCTHPED+P PK+EDEM IFE IDR+F
Sbjct: 30 DGRRAPIDCTQPNPNFQEFDNLYLDMNGIIHPCTHPEDRPPPKNEDEMFALIFEYIDRIF 89
Query: 95 RIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIA 154
IVRPR+LLYMAIDGVAPRAKMNQ RSRRFRASKE AEK A
Sbjct: 90 SIVRPRRLLYMAIDGVAPRAKMNQ-------------------QRSRRFRASKEMAEKAA 130
Query: 155 EVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWK 214
+ R +L+A+G +PP+KE+ +HFDSNCITPGTPFMA L+ L YYIHDR+ ND W
Sbjct: 131 SIEEQRRRLMAEGIAVPPKKEEEAHFDSNCITPGTPFMARLADALRYYIHDRITNDAAWA 190
Query: 215 GI-------------------------KVILSDANVP 226
I ++ILSDANVP
Sbjct: 191 NIEFIPRIPRNYHQSYPEFSKFIEINFQIILSDANVP 227
>gi|350537227|ref|NP_001233774.1| ethylene insensitive 5/7 [Solanum lycopersicum]
gi|312063753|gb|ADQ27233.1| 5'-3' exoribonuclease 4 [Solanum lycopersicum]
Length = 978
Score = 225 bits (573), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 118/201 (58%), Positives = 135/201 (67%), Gaps = 20/201 (9%)
Query: 26 SLVSLPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVA 85
S+V + +E +P D SKPNPNGMEFDNLYLDMNGIIHPC HPE KPAP +++ +
Sbjct: 17 SIVDMVEEEPKDDVPVDISKPNPNGMEFDNLYLDMNGIIHPCFHPEGKPAPATYNDVFNS 76
Query: 86 IFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRA 145
IF+ ID LF +VRPRKLLYMAIDGVAPRAKMNQ R+RRFRA
Sbjct: 77 IFDYIDHLFSLVRPRKLLYMAIDGVAPRAKMNQ-------------------QRTRRFRA 117
Query: 146 SKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHD 205
SK+ AE AE R+RE+ + IL P EK DSN ITPGTPFMA LS L YYIH
Sbjct: 118 SKDAAESEAEEKRLREEFEMEAAILVP-TEKPETSDSNVITPGTPFMAVLSIALQYYIHS 176
Query: 206 RLNNDPGWKGIKVILSDANVP 226
RLN + GW+ KVILSDANVP
Sbjct: 177 RLNKNAGWRFTKVILSDANVP 197
>gi|449452066|ref|XP_004143781.1| PREDICTED: 5'-3' exoribonuclease 3-like [Cucumis sativus]
Length = 1101
Score = 225 bits (573), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 119/196 (60%), Positives = 137/196 (69%), Gaps = 20/196 (10%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
P ++G IP D+SKPNPN +EFDNLYLDMNGIIHPC HPED+P+P E+ +F+ I
Sbjct: 26 PVVIDGIAIPVDTSKPNPNKLEFDNLYLDMNGIIHPCFHPEDRPSPTTFSEVFQCMFDYI 85
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
DRLF +VRPRKLLYMAIDGVAPRAKMNQ RSRRFRA+K+
Sbjct: 86 DRLFVMVRPRKLLYMAIDGVAPRAKMNQ-------------------QRSRRFRAAKDAI 126
Query: 151 EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
+ AE R+RE+ +G LPP KE+ FDSN ITPGT FMA LS L YY+H RLNND
Sbjct: 127 DAAAEETRLREEFEKEGRKLPP-KEESQVFDSNVITPGTDFMAVLSIALQYYVHIRLNND 185
Query: 211 PGWKGIKVILSDANVP 226
PGWK IKVILSDANVP
Sbjct: 186 PGWKNIKVILSDANVP 201
>gi|308805434|ref|XP_003080029.1| putative 5-3 exoribonuclease (ISS) [Ostreococcus tauri]
gi|116058488|emb|CAL53677.1| putative 5-3 exoribonuclease (ISS) [Ostreococcus tauri]
Length = 1057
Score = 225 bits (573), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 115/196 (58%), Positives = 138/196 (70%), Gaps = 20/196 (10%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
P + G+ + D+S+ NPNG+EFDNLYLDMNGIIHPC HPED+PAP E E+ IF+ I
Sbjct: 26 PMDELGRAVALDASRANPNGIEFDNLYLDMNGIIHPCFHPEDRPAPTTEGEVFENIFDYI 85
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
DRLF ++RPRK+LYMAIDGVAPRAKMNQ RSRRFRA++E
Sbjct: 86 DRLFLMIRPRKVLYMAIDGVAPRAKMNQ-------------------QRSRRFRAAQEAK 126
Query: 151 EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
EK E ++REKL +G + P+ E G FDSN ITPGTPFM LS L YY+HDRLNND
Sbjct: 127 EKAMEEEKLREKLTREGVKVQPKVESGV-FDSNVITPGTPFMGRLSEALKYYVHDRLNND 185
Query: 211 PGWKGIKVILSDANVP 226
PGW+GI+VI SDA+VP
Sbjct: 186 PGWRGIEVIFSDASVP 201
>gi|449528758|ref|XP_004171370.1| PREDICTED: 5'-3' exoribonuclease 3-like [Cucumis sativus]
Length = 373
Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 119/196 (60%), Positives = 137/196 (69%), Gaps = 20/196 (10%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
P ++G IP D+SKPNPN +EFDNLYLDMNGIIHPC HPED+P+P E+ +F+ I
Sbjct: 26 PVVIDGIAIPVDTSKPNPNKLEFDNLYLDMNGIIHPCFHPEDRPSPTTFSEVFQCMFDYI 85
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
DRLF +VRPRKLLYMAIDGVAPRAKMNQ RSRRFRA+K+
Sbjct: 86 DRLFVMVRPRKLLYMAIDGVAPRAKMNQ-------------------QRSRRFRAAKDAI 126
Query: 151 EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
+ AE R+RE+ +G LPP KE+ FDSN ITPGT FMA LS L YY+H RLNND
Sbjct: 127 DAAAEETRLREEFEKEGRKLPP-KEESQVFDSNVITPGTDFMAVLSIALQYYVHIRLNND 185
Query: 211 PGWKGIKVILSDANVP 226
PGWK IKVILSDANVP
Sbjct: 186 PGWKNIKVILSDANVP 201
>gi|303277183|ref|XP_003057885.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460542|gb|EEH57836.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 398
Score = 223 bits (567), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 116/193 (60%), Positives = 136/193 (70%), Gaps = 20/193 (10%)
Query: 34 VNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRL 93
++G P D S PNPNG EFDNLYLDMNGIIHPC HPED+PAP E+E+ IF+ IDRL
Sbjct: 1 MDGNTCPVDCSAPNPNGQEFDNLYLDMNGIIHPCFHPEDRPAPTTEEEVFECIFDYIDRL 60
Query: 94 FRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKI 153
F ++RPRKLLYMAIDGVAPRAKMNQ RSRRFRA++E EK
Sbjct: 61 FAMIRPRKLLYMAIDGVAPRAKMNQ-------------------QRSRRFRAAQEAQEKE 101
Query: 154 AEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGW 213
E ++RE L A+G + P+K K FDSN ITPGTPFM LSA L YY+H RLN DPGW
Sbjct: 102 EEEEKLRETLRAEGVKV-PDKVKSEAFDSNVITPGTPFMGRLSAALQYYVHQRLNTDPGW 160
Query: 214 KGIKVILSDANVP 226
+G+KVI+SDA+VP
Sbjct: 161 RGVKVIMSDASVP 173
>gi|47214629|emb|CAG01470.1| unnamed protein product [Tetraodon nigroviridis]
Length = 836
Score = 221 bits (564), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 116/195 (59%), Positives = 130/195 (66%), Gaps = 44/195 (22%)
Query: 32 QEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECID 91
+E NG +IP D+++PNPN +EFDNLYLDMNGIIHPCTHPEDKPAPK+EDEMMVAIFE ID
Sbjct: 27 KECNGVRIPVDTTRPNPNEVEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIFEYID 86
Query: 92 RLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAE 151
RLF IVRPR++LYMAIDGVAPRAKMNQ RSRRFRASKE AE
Sbjct: 87 RLFNIVRPRRVLYMAIDGVAPRAKMNQ-------------------QRSRRFRASKEGAE 127
Query: 152 KIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDP 211
+ E RIRE+ GT FM L+ CL YYI DRLNNDP
Sbjct: 128 LVEEKKRIREE-------------------------GTEFMDNLAKCLRYYIADRLNNDP 162
Query: 212 GWKGIKVILSDANVP 226
GW+ I V LSDA+VP
Sbjct: 163 GWRNITVFLSDASVP 177
>gi|255538898|ref|XP_002510514.1| 5'->3' exoribonuclease, putative [Ricinus communis]
gi|223551215|gb|EEF52701.1| 5'->3' exoribonuclease, putative [Ricinus communis]
Length = 1113
Score = 221 bits (564), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 118/196 (60%), Positives = 138/196 (70%), Gaps = 20/196 (10%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
P ++G KIP D+S+PNPN +E+DNLYLDMNGIIHPC HPED+P+P +E+ +F+ I
Sbjct: 26 PVVIDGVKIPVDASRPNPNNIEYDNLYLDMNGIIHPCFHPEDRPSPTSFEEVFQCMFDYI 85
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
DRLF +VRPRKLLYMAIDGVAPRAKMNQ RSRRFRA+K+
Sbjct: 86 DRLFVMVRPRKLLYMAIDGVAPRAKMNQ-------------------QRSRRFRAAKDRE 126
Query: 151 EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
E AE R+R++ +G LPP KE FDSN ITPGT FMA LS L YYIH RLNND
Sbjct: 127 EAAAEEERLRQEFEREGRKLPP-KESSQVFDSNIITPGTEFMAVLSIALQYYIHLRLNND 185
Query: 211 PGWKGIKVILSDANVP 226
PGWK +KVILSDANVP
Sbjct: 186 PGWKKVKVILSDANVP 201
>gi|167861118|gb|ACA05276.1| putative ethylene insensitive 5/7 [Solanum lycopersicum]
Length = 696
Score = 221 bits (564), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 117/201 (58%), Positives = 134/201 (66%), Gaps = 20/201 (9%)
Query: 26 SLVSLPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVA 85
S+V + +E +P D SKPNPNGMEFDNLYLDMNGIIHPC HPE KPAP +++ +
Sbjct: 17 SIVDMVEEEPKDDVPVDISKPNPNGMEFDNLYLDMNGIIHPCFHPEGKPAPATYNDVFNS 76
Query: 86 IFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRA 145
IF+ ID LF +VRPRKLLYMAIDGVAPRAKMNQ R+RRFRA
Sbjct: 77 IFDYIDHLFSLVRPRKLLYMAIDGVAPRAKMNQ-------------------QRTRRFRA 117
Query: 146 SKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHD 205
SK+ AE AE R+RE+ + IL P EK DSN ITPGTPFMA LS L Y IH
Sbjct: 118 SKDAAESEAEEKRLREEFEMEAAILVP-TEKPETSDSNVITPGTPFMAVLSIALQYNIHS 176
Query: 206 RLNNDPGWKGIKVILSDANVP 226
RLN + GW+ KVILSDANVP
Sbjct: 177 RLNKNAGWRFTKVILSDANVP 197
>gi|194380934|dbj|BAG64035.1| unnamed protein product [Homo sapiens]
Length = 896
Score = 221 bits (562), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 113/167 (67%), Positives = 122/167 (73%), Gaps = 20/167 (11%)
Query: 60 MNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQP 119
MNGIIHPCTHPEDKPAPK+EDEMMVAIFE IDRLF IVRPR+LLYMAIDGVAPRAKMNQ
Sbjct: 1 MNGIIHPCTHPEDKPAPKNEDEMMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQ- 59
Query: 120 LTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSH 179
RSRRFRASKE E E R+RE++LA G LPPE+ K
Sbjct: 60 ------------------QRSRRFRASKEGMEAAVEKQRVREEILAKGGFLPPEEIK-ER 100
Query: 180 FDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
FDSNCITPGT FM L+ CL YYI DRLNNDPGWK + VILSDA+ P
Sbjct: 101 FDSNCITPGTEFMDNLAKCLRYYIADRLNNDPGWKNLTVILSDASAP 147
>gi|338719278|ref|XP_003363975.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 2 [Equus caballus]
gi|338719280|ref|XP_003363976.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 3 [Equus caballus]
Length = 896
Score = 221 bits (562), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 113/167 (67%), Positives = 122/167 (73%), Gaps = 20/167 (11%)
Query: 60 MNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQP 119
MNGIIHPCTHPEDKPAPK+EDEMMVAIFE IDRLF IVRPR+LLYMAIDGVAPRAKMNQ
Sbjct: 1 MNGIIHPCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQ- 59
Query: 120 LTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSH 179
RSRRFRASKE E E R+RE++LA G LPPE+ K
Sbjct: 60 ------------------QRSRRFRASKEGMEAAVEKQRVREEILAKGGFLPPEEIK-ER 100
Query: 180 FDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
FDSNCITPGT FM L+ CL YYI DRLNNDPGWK + VILSDA+ P
Sbjct: 101 FDSNCITPGTEFMDNLAKCLRYYIADRLNNDPGWKNLTVILSDASAP 147
>gi|296200318|ref|XP_002747535.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 3 [Callithrix jacchus]
Length = 896
Score = 221 bits (562), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 113/167 (67%), Positives = 122/167 (73%), Gaps = 20/167 (11%)
Query: 60 MNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQP 119
MNGIIHPCTHPEDKPAPK+EDEMMVAIFE IDRLF IVRPR+LLYMAIDGVAPRAKMNQ
Sbjct: 1 MNGIIHPCTHPEDKPAPKNEDEMMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQ- 59
Query: 120 LTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSH 179
RSRRFRASKE E E R+RE++LA G LPPE+ K
Sbjct: 60 ------------------QRSRRFRASKEGMEAAVEKQRVREEILAKGGFLPPEEIK-ER 100
Query: 180 FDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
FDSNCITPGT FM L+ CL YYI DRLNNDPGWK + VILSDA+ P
Sbjct: 101 FDSNCITPGTEFMDNLAKCLRYYIADRLNNDPGWKNLTVILSDASAP 147
>gi|332238206|ref|XP_003268294.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 2 [Nomascus leucogenys]
Length = 896
Score = 221 bits (562), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 113/167 (67%), Positives = 122/167 (73%), Gaps = 20/167 (11%)
Query: 60 MNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQP 119
MNGIIHPCTHPEDKPAPK+EDEMMVAIFE IDRLF IVRPR+LLYMAIDGVAPRAKMNQ
Sbjct: 1 MNGIIHPCTHPEDKPAPKNEDEMMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQ- 59
Query: 120 LTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSH 179
RSRRFRASKE E E R+RE++LA G LPPE+ K
Sbjct: 60 ------------------QRSRRFRASKEGMEAAVEKQRVREEILAKGGFLPPEEIK-ER 100
Query: 180 FDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
FDSNCITPGT FM L+ CL YYI DRLNNDPGWK + VILSDA+ P
Sbjct: 101 FDSNCITPGTEFMDNLAKCLRYYIADRLNNDPGWKNLTVILSDASAP 147
>gi|307106569|gb|EFN54814.1| hypothetical protein CHLNCDRAFT_24310, partial [Chlorella
variabilis]
Length = 326
Score = 220 bits (561), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 116/195 (59%), Positives = 138/195 (70%), Gaps = 21/195 (10%)
Query: 32 QEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECID 91
Q +NG ++P D+S+PNPNG+EFDNLYLDMNGIIHPC HPED+PAP E E+ +F+ ID
Sbjct: 27 QVINGVEVPVDTSQPNPNGLEFDNLYLDMNGIIHPCFHPEDRPAPTTEQEVFTTMFDYID 86
Query: 92 RLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAE 151
RLF IVRPRKLLYMAIDGVAPRAKMNQ RSRRFRA++E E
Sbjct: 87 RLFAIVRPRKLLYMAIDGVAPRAKMNQ-------------------QRSRRFRAAQEAEE 127
Query: 152 KIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDP 211
+ E ++R++ G +P K++ + FDSN ITPGTPFM LS L YYIH RLN DP
Sbjct: 128 REKEEEKLRDEFAKQGIKVP--KKESAVFDSNVITPGTPFMHRLSVALQYYIHLRLNADP 185
Query: 212 GWKGIKVILSDANVP 226
GW+GIKVILSDAN P
Sbjct: 186 GWRGIKVILSDANSP 200
>gi|384490873|gb|EIE82069.1| hypothetical protein RO3G_06774 [Rhizopus delemar RA 99-880]
Length = 967
Score = 220 bits (561), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 115/196 (58%), Positives = 131/196 (66%), Gaps = 20/196 (10%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
P+ VNG IP D++KPNPN EFDNLYLDMNGIIHPC HPE KPAP EDEMM+ IF +
Sbjct: 26 PKTVNGMTIPVDTTKPNPNNEEFDNLYLDMNGIIHPCCHPEGKPAPATEDEMMIEIFTYL 85
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
DR+ IVRPRK+LYMAIDGVAPRAKMNQ RSRRFRA++
Sbjct: 86 DRIVDIVRPRKVLYMAIDGVAPRAKMNQ-------------------QRSRRFRAAQLAQ 126
Query: 151 EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
+ R+ +L A G EK K SHFDSNCITPGTPFMA L+ CL Y+I + N D
Sbjct: 127 IERDASERVAYELAAIGQEHQMEK-KESHFDSNCITPGTPFMAHLATCLRYHIASKQNTD 185
Query: 211 PGWKGIKVILSDANVP 226
P WK +KVILSDA VP
Sbjct: 186 PLWKKLKVILSDATVP 201
>gi|426240937|ref|XP_004014350.1| PREDICTED: 5'-3' exoribonuclease 2 [Ovis aries]
Length = 897
Score = 219 bits (559), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 113/167 (67%), Positives = 122/167 (73%), Gaps = 20/167 (11%)
Query: 60 MNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQP 119
MNGIIHPCTHPEDKPAPK+EDEMMVAIFE IDRLF IVRPR+LLYMAIDGVAPRAKMNQ
Sbjct: 1 MNGIIHPCTHPEDKPAPKNEDEMMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQ- 59
Query: 120 LTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSH 179
RSRRFRASKE E E R+RE++LA G LPPE+ K
Sbjct: 60 ------------------QRSRRFRASKEGMEAAIEKQRVREEILAKGGYLPPEEIK-ER 100
Query: 180 FDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
FDSNCITPGT FM L+ CL YYI DRLNNDPGWK + VILSDA+ P
Sbjct: 101 FDSNCITPGTEFMDNLAKCLRYYIADRLNNDPGWKNLTVILSDASAP 147
>gi|356562399|ref|XP_003549459.1| PREDICTED: 5'-3' exoribonuclease 3-like [Glycine max]
Length = 1065
Score = 219 bits (558), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 115/193 (59%), Positives = 137/193 (70%), Gaps = 20/193 (10%)
Query: 34 VNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRL 93
++G +IP D+S NPN +E+DNLYLDMNGIIHPC HPED+P+P DE+ +F+ IDRL
Sbjct: 29 IDGVQIPVDTSNKNPNNIEYDNLYLDMNGIIHPCFHPEDRPSPTSFDEVFECMFDYIDRL 88
Query: 94 FRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKI 153
F +VRPRKLLYMAIDGVAPRAKMNQ RSRRFRA+K+ A+
Sbjct: 89 FVMVRPRKLLYMAIDGVAPRAKMNQ-------------------QRSRRFRAAKDAADAA 129
Query: 154 AEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGW 213
AE R+RE+ +G LPP+ E + FDSN ITPGT FMA LS L YY+H RLNNDPGW
Sbjct: 130 AEETRLREEFEKEGRKLPPKGESQT-FDSNVITPGTEFMAVLSIALQYYVHLRLNNDPGW 188
Query: 214 KGIKVILSDANVP 226
+ IKVILSDANVP
Sbjct: 189 QNIKVILSDANVP 201
>gi|406861589|gb|EKD14643.1| 5'->3' exoribonculease Dhp1 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 988
Score = 217 bits (553), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 110/197 (55%), Positives = 139/197 (70%), Gaps = 22/197 (11%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
P+E++GQ+IP D+ PNPNG EFDNLYLDMNGI+HPC+HPED+PAPKDE+EMM+AIF+
Sbjct: 26 PREIDGQEIPIDTRGPNPNGEEFDNLYLDMNGIVHPCSHPEDRPAPKDEEEMMLAIFKYT 85
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
DR+ +VRPRKLL +AIDGVAPRAKMNQ RSRRFR+++E
Sbjct: 86 DRVVNMVRPRKLLLIAIDGVAPRAKMNQ-------------------QRSRRFRSAQEAQ 126
Query: 151 EKIAEVARIREKLLADGC-ILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNN 209
EK A+ A + + L + G I PE +K +DSN ITPGTPFM L+A L Y+I +LN
Sbjct: 127 EKEADKAELLKMLKSQGGHIEEPEIKKA--WDSNEITPGTPFMDILAASLRYWIAYKLNT 184
Query: 210 DPGWKGIKVILSDANVP 226
DP W +KVI+SD+ VP
Sbjct: 185 DPAWAKMKVIISDSTVP 201
>gi|145347709|ref|XP_001418304.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578533|gb|ABO96597.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 802
Score = 215 bits (548), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 112/196 (57%), Positives = 142/196 (72%), Gaps = 20/196 (10%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
P + G+++ +S++ NPNG+EFDNLYLDMNGIIHPC HPED+PAP E+E+ IF+ I
Sbjct: 26 PVDALGRRVELNSAEANPNGIEFDNLYLDMNGIIHPCFHPEDRPAPTTEEEVFECIFDYI 85
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
DRLF ++RPRK+LYMAIDGVAPRAKMNQ RSRRFR+++E
Sbjct: 86 DRLFLMIRPRKVLYMAIDGVAPRAKMNQ-------------------QRSRRFRSAQEAR 126
Query: 151 EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
EK E ++REKL+ +G + P++E G FDSN ITPGTPFM LS L YY+HD+LNND
Sbjct: 127 EKAEEEEKLREKLIREGVKVQPKQESGV-FDSNVITPGTPFMGRLSEALKYYVHDKLNND 185
Query: 211 PGWKGIKVILSDANVP 226
PGW+GI+VI SDA+VP
Sbjct: 186 PGWRGIEVIFSDASVP 201
>gi|356553393|ref|XP_003545041.1| PREDICTED: 5'-3' exoribonuclease 3-like [Glycine max]
Length = 1075
Score = 215 bits (547), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 116/196 (59%), Positives = 139/196 (70%), Gaps = 20/196 (10%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
P ++G +IP D+SK NPN +E+DNLYLDMNGIIHPC HPED+P+P DE+ +F+ I
Sbjct: 26 PVVIDGVQIPVDTSKKNPNNIEYDNLYLDMNGIIHPCFHPEDRPSPTSFDEVFECMFDYI 85
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
DRLF +VRPR+LLYMAIDGVAPRAKMNQ RSRRFRA+K+ A
Sbjct: 86 DRLFIMVRPRELLYMAIDGVAPRAKMNQ-------------------QRSRRFRAAKDAA 126
Query: 151 EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
+ AE AR+RE+ +G LP + E + FDSN ITPGT FMA LS L YY+H RLNND
Sbjct: 127 DAAAEEARLREEFEKEGRKLPSKGESQT-FDSNVITPGTEFMAVLSIALQYYVHLRLNND 185
Query: 211 PGWKGIKVILSDANVP 226
PGW+ IKVILSDANVP
Sbjct: 186 PGWQNIKVILSDANVP 201
>gi|302142638|emb|CBI19841.3| unnamed protein product [Vitis vinifera]
Length = 870
Score = 213 bits (542), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 119/196 (60%), Positives = 138/196 (70%), Gaps = 20/196 (10%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
P E++G IP D+SKPNPN +E+DNLYLDMNGIIHPC HPED+P+P DE+ +F+ I
Sbjct: 26 PVEIDGISIPVDTSKPNPNNIEYDNLYLDMNGIIHPCFHPEDRPSPTTFDEVFQCMFDYI 85
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
DRLF +VRPRKLLYMAIDGVAPRAKMNQ RSRRFRA+K+ A
Sbjct: 86 DRLFVMVRPRKLLYMAIDGVAPRAKMNQ-------------------QRSRRFRAAKDAA 126
Query: 151 EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
+ AE R+RE+ +G LPP K++ DSN ITPGT FM LS L YYIH RLNND
Sbjct: 127 DAAAEEERLREEFEKEGRKLPP-KQQSQVCDSNVITPGTEFMGVLSVALQYYIHLRLNND 185
Query: 211 PGWKGIKVILSDANVP 226
PGWK IKVILSDANVP
Sbjct: 186 PGWKSIKVILSDANVP 201
>gi|359492219|ref|XP_002280236.2| PREDICTED: 5'-3' exoribonuclease 3-like [Vitis vinifera]
Length = 1065
Score = 212 bits (540), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 119/196 (60%), Positives = 138/196 (70%), Gaps = 20/196 (10%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
P E++G IP D+SKPNPN +E+DNLYLDMNGIIHPC HPED+P+P DE+ +F+ I
Sbjct: 26 PVEIDGISIPVDTSKPNPNNIEYDNLYLDMNGIIHPCFHPEDRPSPTTFDEVFQCMFDYI 85
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
DRLF +VRPRKLLYMAIDGVAPRAKMNQ RSRRFRA+K+ A
Sbjct: 86 DRLFVMVRPRKLLYMAIDGVAPRAKMNQ-------------------QRSRRFRAAKDAA 126
Query: 151 EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
+ AE R+RE+ +G LPP K++ DSN ITPGT FM LS L YYIH RLNND
Sbjct: 127 DAAAEEERLREEFEKEGRKLPP-KQQSQVCDSNVITPGTEFMGVLSVALQYYIHLRLNND 185
Query: 211 PGWKGIKVILSDANVP 226
PGWK IKVILSDANVP
Sbjct: 186 PGWKSIKVILSDANVP 201
>gi|147793034|emb|CAN59715.1| hypothetical protein VITISV_006076 [Vitis vinifera]
Length = 1102
Score = 212 bits (540), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 108/196 (55%), Positives = 132/196 (67%), Gaps = 20/196 (10%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
P VNG + D+++PNPNG EFDNLYLDMNGIIHPC HPE PAPK ++ A+F+ I
Sbjct: 157 PAVVNGVSVAVDTTRPNPNGNEFDNLYLDMNGIIHPCFHPEGLPAPKTYTDVFKAVFKYI 216
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
DR+F +VRPRKLLYMAIDGVAPRAKMNQ R+RRFRA+KE A
Sbjct: 217 DRIFSLVRPRKLLYMAIDGVAPRAKMNQ-------------------QRARRFRAAKEAA 257
Query: 151 EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
+ + R++ ++ +L ++ DSN ITPGT FMA LS+ L YYIH R+N D
Sbjct: 258 DDASGTERLKTVFESEMEMLAL-LDQTKKLDSNVITPGTEFMALLSSALKYYIHLRMNLD 316
Query: 211 PGWKGIKVILSDANVP 226
PGW+GIKVILSDANVP
Sbjct: 317 PGWRGIKVILSDANVP 332
>gi|359490022|ref|XP_002275560.2| PREDICTED: 5'-3' exoribonuclease 4-like [Vitis vinifera]
Length = 834
Score = 212 bits (540), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 108/196 (55%), Positives = 132/196 (67%), Gaps = 20/196 (10%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
P VNG + D+++PNPNG EFDNLYLDMNGIIHPC HPE PAPK ++ A+F+ I
Sbjct: 26 PAVVNGVSVAVDTTRPNPNGNEFDNLYLDMNGIIHPCFHPEGLPAPKTYTDVFKAVFKYI 85
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
DR+F +VRPRKLLYMAIDGVAPRAKMNQ R+RRFRA+KE A
Sbjct: 86 DRIFSLVRPRKLLYMAIDGVAPRAKMNQ-------------------QRARRFRAAKEAA 126
Query: 151 EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
+ + R++ ++ +L ++ DSN ITPGT FMA LS+ L YYIH R+N D
Sbjct: 127 DDASGTERLKTVFESEMEML-ALLDQTKKLDSNVITPGTEFMALLSSALKYYIHLRMNLD 185
Query: 211 PGWKGIKVILSDANVP 226
PGW+GIKVILSDANVP
Sbjct: 186 PGWRGIKVILSDANVP 201
>gi|224123332|ref|XP_002319052.1| predicted protein [Populus trichocarpa]
gi|222857428|gb|EEE94975.1| predicted protein [Populus trichocarpa]
Length = 965
Score = 210 bits (535), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 119/211 (56%), Positives = 140/211 (66%), Gaps = 22/211 (10%)
Query: 18 DSKPYSFASLVSL-PQE-VNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPA 75
D P S + ++ PQE NG P D SKPNPNG+EFDNLYLDMNGIIHPC HPE KPA
Sbjct: 12 DRYPLSISDVIEEEPQEDSNGNSKPIDVSKPNPNGIEFDNLYLDMNGIIHPCFHPEGKPA 71
Query: 76 PKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTW 135
P D++ +IF ID LF +VRPRKLL+MAIDGVAPRAKMNQ
Sbjct: 72 PATYDDVFKSIFAYIDHLFALVRPRKLLFMAIDGVAPRAKMNQ----------------- 114
Query: 136 QLMRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACL 195
RSRRFRA+K+ A+ AE R+R++ A+G +L KEK FDSN ITPGT FMA L
Sbjct: 115 --QRSRRFRAAKDAAQAEAEEERLRKEFEAEGELLSV-KEKPETFDSNVITPGTQFMAAL 171
Query: 196 SACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
S L YYI RLN++ GW+ KVILSD+NVP
Sbjct: 172 STALQYYIQSRLNHNLGWQNTKVILSDSNVP 202
>gi|224082986|ref|XP_002306919.1| predicted protein [Populus trichocarpa]
gi|222856368|gb|EEE93915.1| predicted protein [Populus trichocarpa]
Length = 998
Score = 210 bits (535), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 118/196 (60%), Positives = 136/196 (69%), Gaps = 20/196 (10%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
P + G KIP D+SKPNPN +E+DNLYLDMNGIIHPC HPED+P+P E+ +F+ I
Sbjct: 26 PVVIEGVKIPVDTSKPNPNNIEYDNLYLDMNGIIHPCFHPEDRPSPTSFGEVFQCMFDYI 85
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
DRLF +VRPRKLLYMAIDGVAPRAKMNQ RSRRFRA+K+ +
Sbjct: 86 DRLFVMVRPRKLLYMAIDGVAPRAKMNQ-------------------QRSRRFRAAKDAS 126
Query: 151 EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
+ AE R+RE+ +G LPP KE FDSN ITPGT FMA LS L YYIH RLN D
Sbjct: 127 DAAAEEERLREEFEREGRKLPP-KETSQTFDSNVITPGTEFMAVLSIALQYYIHLRLNYD 185
Query: 211 PGWKGIKVILSDANVP 226
PGWK IKV+LSDANVP
Sbjct: 186 PGWKKIKVVLSDANVP 201
>gi|62318783|dbj|BAD93823.1| 5'-3' exoribonuclease 2 [Arabidopsis thaliana]
Length = 1012
Score = 210 bits (534), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 122/198 (61%), Positives = 137/198 (69%), Gaps = 22/198 (11%)
Query: 31 PQEVNGQ--KIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFE 88
P EVNG IP DSSKPNPNG E+DNLYLDMNGIIHPC HPEDKP+P E+ +F+
Sbjct: 26 PLEVNGGGVTIPIDSSKPNPNGYEYDNLYLDMNGIIHPCFHPEDKPSPTTFTEVFQCMFD 85
Query: 89 CIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKE 148
IDRLF +VRPRKLL+MAIDGVAPRAKMNQ R+RRFRA+K+
Sbjct: 86 YIDRLFVMVRPRKLLFMAIDGVAPRAKMNQ-------------------QRARRFRAAKD 126
Query: 149 TAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLN 208
AE AE ++RE+ +G LPP K FDSN ITPGT FMA LS L YYIH RLN
Sbjct: 127 AAEAAAEEEQLREEFEREGKKLPP-KVDSQVFDSNVITPGTEFMATLSFALRYYIHVRLN 185
Query: 209 NDPGWKGIKVILSDANVP 226
+DPGWK IKVILSDANVP
Sbjct: 186 SDPGWKNIKVILSDANVP 203
>gi|15238990|ref|NP_199069.1| 5'-3' exoribonuclease 2 [Arabidopsis thaliana]
gi|75262831|sp|Q9FQ02.1|XRN2_ARATH RecName: Full=5'-3' exoribonuclease 2; AltName: Full=Protein
EXORIBONUCLEASE 2
gi|11875630|gb|AAG40733.1|AF286720_1 XRN2 [Arabidopsis thaliana]
gi|51970342|dbj|BAD43863.1| unnamed protein product [Arabidopsis thaliana]
gi|62319144|dbj|BAD94308.1| 5'-3' exoribonuclease 2 [Arabidopsis thaliana]
gi|332007441|gb|AED94824.1| 5'-3' exoribonuclease 2 [Arabidopsis thaliana]
Length = 1012
Score = 210 bits (534), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 122/198 (61%), Positives = 137/198 (69%), Gaps = 22/198 (11%)
Query: 31 PQEVNGQ--KIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFE 88
P EVNG IP DSSKPNPNG E+DNLYLDMNGIIHPC HPEDKP+P E+ +F+
Sbjct: 26 PLEVNGGGVTIPIDSSKPNPNGYEYDNLYLDMNGIIHPCFHPEDKPSPTTFTEVFQCMFD 85
Query: 89 CIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKE 148
IDRLF +VRPRKLL+MAIDGVAPRAKMNQ R+RRFRA+K+
Sbjct: 86 YIDRLFVMVRPRKLLFMAIDGVAPRAKMNQ-------------------QRARRFRAAKD 126
Query: 149 TAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLN 208
AE AE ++RE+ +G LPP K FDSN ITPGT FMA LS L YYIH RLN
Sbjct: 127 AAEAAAEEEQLREEFEREGKKLPP-KVDSQVFDSNVITPGTEFMATLSFALRYYIHVRLN 185
Query: 209 NDPGWKGIKVILSDANVP 226
+DPGWK IKVILSDANVP
Sbjct: 186 SDPGWKNIKVILSDANVP 203
>gi|224131346|ref|XP_002328516.1| predicted protein [Populus trichocarpa]
gi|222838231|gb|EEE76596.1| predicted protein [Populus trichocarpa]
Length = 948
Score = 210 bits (534), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 119/211 (56%), Positives = 139/211 (65%), Gaps = 22/211 (10%)
Query: 18 DSKPYSFASLVSL-PQE-VNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPA 75
D P S ++ PQE NG P D SKPNPNG+E+DNLYLDMNGIIHPC HPE KPA
Sbjct: 12 DRYPLSIVDVIEEEPQEDSNGNSKPIDVSKPNPNGIEYDNLYLDMNGIIHPCFHPEGKPA 71
Query: 76 PKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTW 135
P D++ +IF ID LF +VRPRKLL+MAIDGVAPRAKMNQ
Sbjct: 72 PATYDDVFKSIFVYIDHLFALVRPRKLLFMAIDGVAPRAKMNQ----------------- 114
Query: 136 QLMRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACL 195
RSRRFRA+K+ A+ AE R+R++ A+G +L KEK DSN ITPGT FMA L
Sbjct: 115 --QRSRRFRAAKDAAQAEAEEERLRKEFEAEGVLL-SVKEKPETRDSNVITPGTQFMAVL 171
Query: 196 SACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
S L YYI RLN++PGW+ KVILSDANVP
Sbjct: 172 SIALQYYIQSRLNHNPGWQNTKVILSDANVP 202
>gi|13605795|gb|AAK32883.1|AF367296_1 AT5g42540/K16E1_1 [Arabidopsis thaliana]
gi|20147139|gb|AAM10286.1| AT5g42540/K16E1_1 [Arabidopsis thaliana]
Length = 813
Score = 210 bits (534), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 122/198 (61%), Positives = 137/198 (69%), Gaps = 22/198 (11%)
Query: 31 PQEVNGQ--KIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFE 88
P EVNG IP DSSKPNPNG E+DNLYLDMNGIIHPC HPEDKP+P E+ +F+
Sbjct: 26 PLEVNGGGVTIPIDSSKPNPNGYEYDNLYLDMNGIIHPCFHPEDKPSPTTFTEVFQCMFD 85
Query: 89 CIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKE 148
IDRLF +VRPRKLL+MAIDGVAPRAKMNQ R+RRFRA+K+
Sbjct: 86 YIDRLFVMVRPRKLLFMAIDGVAPRAKMNQ-------------------QRARRFRAAKD 126
Query: 149 TAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLN 208
AE AE ++RE+ +G LPP K FDSN ITPGT FMA LS L YYIH RLN
Sbjct: 127 AAEAAAEEEQLREEFEREGKKLPP-KVDSQVFDSNVITPGTEFMATLSFALRYYIHVRLN 185
Query: 209 NDPGWKGIKVILSDANVP 226
+DPGWK IKVILSDANVP
Sbjct: 186 SDPGWKNIKVILSDANVP 203
>gi|334188143|ref|NP_001190450.1| 5'-3' exoribonuclease 2 [Arabidopsis thaliana]
gi|332007442|gb|AED94825.1| 5'-3' exoribonuclease 2 [Arabidopsis thaliana]
Length = 1023
Score = 209 bits (533), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 122/198 (61%), Positives = 137/198 (69%), Gaps = 22/198 (11%)
Query: 31 PQEVNGQ--KIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFE 88
P EVNG IP DSSKPNPNG E+DNLYLDMNGIIHPC HPEDKP+P E+ +F+
Sbjct: 26 PLEVNGGGVTIPIDSSKPNPNGYEYDNLYLDMNGIIHPCFHPEDKPSPTTFTEVFQCMFD 85
Query: 89 CIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKE 148
IDRLF +VRPRKLL+MAIDGVAPRAKMNQ R+RRFRA+K+
Sbjct: 86 YIDRLFVMVRPRKLLFMAIDGVAPRAKMNQ-------------------QRARRFRAAKD 126
Query: 149 TAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLN 208
AE AE ++RE+ +G LPP K FDSN ITPGT FMA LS L YYIH RLN
Sbjct: 127 AAEAAAEEEQLREEFEREGKKLPP-KVDSQVFDSNVITPGTEFMATLSFALRYYIHVRLN 185
Query: 209 NDPGWKGIKVILSDANVP 226
+DPGWK IKVILSDANVP
Sbjct: 186 SDPGWKNIKVILSDANVP 203
>gi|9759012|dbj|BAB09325.1| 5'-3' exoribonuclease 2 [Arabidopsis thaliana]
Length = 746
Score = 209 bits (533), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 122/198 (61%), Positives = 137/198 (69%), Gaps = 22/198 (11%)
Query: 31 PQEVNGQ--KIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFE 88
P EVNG IP DSSKPNPNG E+DNLYLDMNGIIHPC HPEDKP+P E+ +F+
Sbjct: 26 PLEVNGGGVTIPIDSSKPNPNGYEYDNLYLDMNGIIHPCFHPEDKPSPTTFTEVFQCMFD 85
Query: 89 CIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKE 148
IDRLF +VRPRKLL+MAIDGVAPRAKMNQ R+RRFRA+K+
Sbjct: 86 YIDRLFVMVRPRKLLFMAIDGVAPRAKMNQ-------------------QRARRFRAAKD 126
Query: 149 TAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLN 208
AE AE ++RE+ +G LPP K FDSN ITPGT FMA LS L YYIH RLN
Sbjct: 127 AAEAAAEEEQLREEFEREGKKLPP-KVDSQVFDSNVITPGTEFMATLSFALRYYIHVRLN 185
Query: 209 NDPGWKGIKVILSDANVP 226
+DPGWK IKVILSDANVP
Sbjct: 186 SDPGWKNIKVILSDANVP 203
>gi|297795249|ref|XP_002865509.1| hypothetical protein ARALYDRAFT_917497 [Arabidopsis lyrata subsp.
lyrata]
gi|297311344|gb|EFH41768.1| hypothetical protein ARALYDRAFT_917497 [Arabidopsis lyrata subsp.
lyrata]
Length = 1053
Score = 209 bits (533), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 121/197 (61%), Positives = 137/197 (69%), Gaps = 21/197 (10%)
Query: 31 PQEVNGQ-KIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFEC 89
P EVNG IP D+SKPNPNG E+DNLYLDMNGIIHPC HPEDKP+P E+ +F+
Sbjct: 26 PLEVNGGVTIPIDTSKPNPNGYEYDNLYLDMNGIIHPCFHPEDKPSPTTFTEVFQCMFDY 85
Query: 90 IDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKET 149
IDRLF +VRPRKLL+MAIDGVAPRAKMNQ R+RRFRA+K+
Sbjct: 86 IDRLFVMVRPRKLLFMAIDGVAPRAKMNQ-------------------QRARRFRAAKDA 126
Query: 150 AEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNN 209
AE AE ++RE+ +G LPP K FDSN ITPGT FMA LS L YYIH RLN+
Sbjct: 127 AEAAAEEEQLREEFEREGKKLPP-KVDSQVFDSNVITPGTEFMATLSFALRYYIHVRLNS 185
Query: 210 DPGWKGIKVILSDANVP 226
DPGWK IKVILSDANVP
Sbjct: 186 DPGWKNIKVILSDANVP 202
>gi|119186689|ref|XP_001243951.1| hypothetical protein CIMG_03392 [Coccidioides immitis RS]
Length = 1031
Score = 209 bits (532), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 107/206 (51%), Positives = 138/206 (66%), Gaps = 23/206 (11%)
Query: 25 ASLVSLPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMV 84
A + LPQE++G++ P D++KPNPNG E DNLYLDMNGI+HPCTHPE KPAP +E EMM+
Sbjct: 35 AVVEELPQEIDGEEFPVDTTKPNPNGEEMDNLYLDMNGIVHPCTHPEGKPAPANEGEMML 94
Query: 85 AIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFR 144
IF+ DR+ +VRPRKLL +A+DGVAPRAKMNQ RSRRFR
Sbjct: 95 EIFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQ-------------------QRSRRFR 135
Query: 145 A---SKETAEKIAEVAR-IREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLH 200
+ +KE EK AE A+ +R++ G + E+ +DSN ITPGTPFM LSA L
Sbjct: 136 SAQEAKEADEKKAEFAKLLRQQNRGKGDMEIAEEVVQKTWDSNVITPGTPFMDILSAALR 195
Query: 201 YYIHDRLNNDPGWKGIKVILSDANVP 226
Y++ +LN DP W+ +K+I+SDA VP
Sbjct: 196 YWVAYKLNTDPAWEKVKIIISDATVP 221
>gi|303317580|ref|XP_003068792.1| XRN 5'-3' exonuclease N-terminus domain containing protein
[Coccidioides posadasii C735 delta SOWgp]
gi|240108473|gb|EER26647.1| XRN 5'-3' exonuclease N-terminus domain containing protein
[Coccidioides posadasii C735 delta SOWgp]
Length = 1016
Score = 209 bits (532), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 107/206 (51%), Positives = 138/206 (66%), Gaps = 23/206 (11%)
Query: 25 ASLVSLPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMV 84
A + LPQE++G++ P D++KPNPNG E DNLYLDMNGI+HPCTHPE KPAP +E EMM+
Sbjct: 20 AVVEELPQEIDGEEFPVDTTKPNPNGEEMDNLYLDMNGIVHPCTHPEGKPAPANEGEMML 79
Query: 85 AIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFR 144
IF+ DR+ +VRPRKLL +A+DGVAPRAKMNQ RSRRFR
Sbjct: 80 EIFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQ-------------------QRSRRFR 120
Query: 145 A---SKETAEKIAEVAR-IREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLH 200
+ +KE EK AE A+ +R++ G + E+ +DSN ITPGTPFM LSA L
Sbjct: 121 SAQEAKEADEKKAEFAKLLRQQNRGKGDMEIAEEVVQKTWDSNVITPGTPFMDILSAALR 180
Query: 201 YYIHDRLNNDPGWKGIKVILSDANVP 226
Y++ +LN DP W+ +K+I+SDA VP
Sbjct: 181 YWVAYKLNTDPAWEKVKIIISDATVP 206
>gi|320038785|gb|EFW20720.1| 5'-3' exoribonculease Dhp1 [Coccidioides posadasii str. Silveira]
Length = 1016
Score = 209 bits (532), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 107/206 (51%), Positives = 138/206 (66%), Gaps = 23/206 (11%)
Query: 25 ASLVSLPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMV 84
A + LPQE++G++ P D++KPNPNG E DNLYLDMNGI+HPCTHPE KPAP +E EMM+
Sbjct: 20 AVVEELPQEIDGEEFPVDTTKPNPNGEEMDNLYLDMNGIVHPCTHPEGKPAPANEGEMML 79
Query: 85 AIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFR 144
IF+ DR+ +VRPRKLL +A+DGVAPRAKMNQ RSRRFR
Sbjct: 80 EIFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQ-------------------QRSRRFR 120
Query: 145 A---SKETAEKIAEVAR-IREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLH 200
+ +KE EK AE A+ +R++ G + E+ +DSN ITPGTPFM LSA L
Sbjct: 121 SAQEAKEADEKKAEFAKLLRQQNRGKGDMEIAEEVVQKTWDSNVITPGTPFMDILSAALR 180
Query: 201 YYIHDRLNNDPGWKGIKVILSDANVP 226
Y++ +LN DP W+ +K+I+SDA VP
Sbjct: 181 YWVAYKLNTDPAWEKVKIIISDATVP 206
>gi|392870672|gb|EAS32493.2| 5'-3' exoribonuclease 2 [Coccidioides immitis RS]
Length = 1016
Score = 209 bits (532), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 107/206 (51%), Positives = 138/206 (66%), Gaps = 23/206 (11%)
Query: 25 ASLVSLPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMV 84
A + LPQE++G++ P D++KPNPNG E DNLYLDMNGI+HPCTHPE KPAP +E EMM+
Sbjct: 20 AVVEELPQEIDGEEFPVDTTKPNPNGEEMDNLYLDMNGIVHPCTHPEGKPAPANEGEMML 79
Query: 85 AIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFR 144
IF+ DR+ +VRPRKLL +A+DGVAPRAKMNQ RSRRFR
Sbjct: 80 EIFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQ-------------------QRSRRFR 120
Query: 145 A---SKETAEKIAEVAR-IREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLH 200
+ +KE EK AE A+ +R++ G + E+ +DSN ITPGTPFM LSA L
Sbjct: 121 SAQEAKEADEKKAEFAKLLRQQNRGKGDMEIAEEVVQKTWDSNVITPGTPFMDILSAALR 180
Query: 201 YYIHDRLNNDPGWKGIKVILSDANVP 226
Y++ +LN DP W+ +K+I+SDA VP
Sbjct: 181 YWVAYKLNTDPAWEKVKIIISDATVP 206
>gi|258563400|ref|XP_002582445.1| 5'-3' exoribonuclease 2 [Uncinocarpus reesii 1704]
gi|237907952|gb|EEP82353.1| 5'-3' exoribonuclease 2 [Uncinocarpus reesii 1704]
Length = 1028
Score = 209 bits (531), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 108/206 (52%), Positives = 136/206 (66%), Gaps = 23/206 (11%)
Query: 25 ASLVSLPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMV 84
A + LPQE NG++IP D++KPNPNG E DNLYLDMNGI+HPCTHPE KP P +E EMM+
Sbjct: 20 AVVEELPQEFNGEEIPVDTTKPNPNGEEMDNLYLDMNGIVHPCTHPEGKPPPSNEGEMML 79
Query: 85 AIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFR 144
IF+ DR+ +VRPRKLL +A+DGVAPRAKMNQ RSRRFR
Sbjct: 80 EIFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQ-------------------QRSRRFR 120
Query: 145 A---SKETAEKIAEVAR-IREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLH 200
+ +KE EK AE A+ +R++ G E+ +DSN ITPGTPFM LSA L
Sbjct: 121 SAQEAKEADEKKAEFAKLLRKQNRGKGDTELAEEVVNKTWDSNVITPGTPFMDILSAALR 180
Query: 201 YYIHDRLNNDPGWKGIKVILSDANVP 226
Y++ +LN DP W+ +K+I+SDA VP
Sbjct: 181 YWVAYKLNTDPAWEKLKIIISDATVP 206
>gi|225681905|gb|EEH20189.1| 5'-3' exoribonuclease [Paracoccidioides brasiliensis Pb03]
Length = 1044
Score = 208 bits (530), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 109/211 (51%), Positives = 140/211 (66%), Gaps = 24/211 (11%)
Query: 21 PYSFASLVS-LPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDE 79
P +S+V LPQE+NGQ++P D++KPNPNG E DNLYLDMNGI+HPCTHPE KP P +E
Sbjct: 15 PKIISSVVEELPQEINGQEVPVDTTKPNPNGEEMDNLYLDMNGIVHPCTHPEGKPPPSNE 74
Query: 80 DEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMR 139
+EMM+ IF+ DR+ +VRPRKLL +A+DGVAPRAKMNQ R
Sbjct: 75 EEMMLEIFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQ-------------------QR 115
Query: 140 SRRFRA---SKETAEKIAEVAR-IREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACL 195
SRRFR+ +KE EK E A+ +R++ C E+ +DSN ITPGTPFM L
Sbjct: 116 SRRFRSAQEAKEADEKKVEFAKLLRKQNGKKSCEEIVEEVTMKTWDSNVITPGTPFMDIL 175
Query: 196 SACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
+A L Y++ +LN DP W+ +KVI+SDA VP
Sbjct: 176 AAALRYWVAYKLNTDPAWEKLKVIISDATVP 206
>gi|4585991|gb|AAD25627.1|AC005287_29 Dhm1- and Dhm2-like protein [Arabidopsis thaliana]
Length = 965
Score = 208 bits (530), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 112/191 (58%), Positives = 131/191 (68%), Gaps = 20/191 (10%)
Query: 36 GQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFR 95
G IP D ++PNPNG EFDNLYLDMNGIIHPC HPE KPAP D++ ++FE ID LF
Sbjct: 32 GDLIPVDITRPNPNGFEFDNLYLDMNGIIHPCFHPEGKPAPATYDDVFKSMFEYIDHLFT 91
Query: 96 IVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAE 155
+VRPRK+LY+AIDGVAPRAKMNQ RSRRFRA+K+ AE AE
Sbjct: 92 LVRPRKILYLAIDGVAPRAKMNQ-------------------QRSRRFRAAKDAAEAEAE 132
Query: 156 VARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKG 215
R+R+ +G IL KEK DSN ITPGTPFMA LS L YYI RLN++PGW+
Sbjct: 133 EERLRKDFEMEGQIL-SAKEKAETCDSNVITPGTPFMAILSVALQYYIQSRLNHNPGWRY 191
Query: 216 IKVILSDANVP 226
+KVILSD+NVP
Sbjct: 192 VKVILSDSNVP 202
>gi|15221841|ref|NP_175851.1| 5'-3' exoribonuclease 4 [Arabidopsis thaliana]
gi|75262833|sp|Q9FQ04.1|XRN4_ARATH RecName: Full=5'-3' exoribonuclease 4; AltName: Full=Protein ACC
INSENSITIVE 1; AltName: Full=Protein ETHYLENE
INSENSITIVE 5; AltName: Full=Protein EXORIBONUCLEASE 4
gi|11875626|gb|AAG40731.1|AF286718_1 XRN4 [Arabidopsis thaliana]
gi|17381112|gb|AAL36368.1| putative exonuclease [Arabidopsis thaliana]
gi|20259665|gb|AAM14350.1| putative exonuclease [Arabidopsis thaliana]
gi|109627646|gb|ABG34298.1| At1g54490 [Arabidopsis thaliana]
gi|332194988|gb|AEE33109.1| 5'-3' exoribonuclease 4 [Arabidopsis thaliana]
Length = 947
Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 112/191 (58%), Positives = 131/191 (68%), Gaps = 20/191 (10%)
Query: 36 GQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFR 95
G IP D ++PNPNG EFDNLYLDMNGIIHPC HPE KPAP D++ ++FE ID LF
Sbjct: 32 GDLIPVDITRPNPNGFEFDNLYLDMNGIIHPCFHPEGKPAPATYDDVFKSMFEYIDHLFT 91
Query: 96 IVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAE 155
+VRPRK+LY+AIDGVAPRAKMNQ RSRRFRA+K+ AE AE
Sbjct: 92 LVRPRKILYLAIDGVAPRAKMNQ-------------------QRSRRFRAAKDAAEAEAE 132
Query: 156 VARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKG 215
R+R+ +G IL KEK DSN ITPGTPFMA LS L YYI RLN++PGW+
Sbjct: 133 EERLRKDFEMEGQIL-SAKEKAETCDSNVITPGTPFMAILSVALQYYIQSRLNHNPGWRY 191
Query: 216 IKVILSDANVP 226
+KVILSD+NVP
Sbjct: 192 VKVILSDSNVP 202
>gi|412993025|emb|CCO16558.1| predicted protein [Bathycoccus prasinos]
Length = 1062
Score = 207 bits (527), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 112/194 (57%), Positives = 135/194 (69%), Gaps = 20/194 (10%)
Query: 33 EVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDR 92
++NG K+ DSSK NPNG EFDNLYLDMNGIIHPC HPED+P P E+E+ + IFE I+R
Sbjct: 28 DINGNKVFVDSSKSNPNGQEFDNLYLDMNGIIHPCFHPEDRPPPTTEEEVFLNIFEYIER 87
Query: 93 LFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEK 152
LF ++RPRK+LYMAIDGVAPRAKMNQ RSRRFRA++E EK
Sbjct: 88 LFLMIRPRKVLYMAIDGVAPRAKMNQ-------------------QRSRRFRAAQEAEEK 128
Query: 153 IAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPG 212
E ++REKL DG +PP+ E G FDSN ITPGTPFM L+ L +Y+ + N D G
Sbjct: 129 KIEEEKLREKLRRDGIEVPPKIESGV-FDSNVITPGTPFMGRLAEALKFYVRKKQNTDKG 187
Query: 213 WKGIKVILSDANVP 226
WK IKVI+SDA+VP
Sbjct: 188 WKNIKVIVSDASVP 201
>gi|345562792|gb|EGX45805.1| hypothetical protein AOL_s00117g10 [Arthrobotrys oligospora ATCC
24927]
Length = 1102
Score = 207 bits (527), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 100/200 (50%), Positives = 134/200 (67%), Gaps = 20/200 (10%)
Query: 27 LVSLPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAI 86
L +LPQE++G +IP D++ PNPNG E DNLYLDMNGI+HPC+HPED+P P+ E EMM+ +
Sbjct: 67 LEALPQEIDGHEIPVDTTGPNPNGEELDNLYLDMNGIVHPCSHPEDRPPPETEQEMMLEV 126
Query: 87 FECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRAS 146
F +R+ +VRPRK+L MA+DGVAPRAKMNQ RSRRFR++
Sbjct: 127 FRYTERVVAMVRPRKVLMMAVDGVAPRAKMNQ-------------------QRSRRFRSA 167
Query: 147 KETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDR 206
+E EK +VA + L + G + +K +DSN ITPGTPFM LS L Y++ +
Sbjct: 168 QEAKEKEEQVAEFVKLLASKGTDIDSNLQKKG-WDSNAITPGTPFMDILSIALKYWVAHK 226
Query: 207 LNNDPGWKGIKVILSDANVP 226
LN DPGW +K+I+SD++VP
Sbjct: 227 LNTDPGWAKLKIIISDSSVP 246
>gi|361125661|gb|EHK97694.1| putative 5'-3' exoribonuclease 2 [Glarea lozoyensis 74030]
Length = 1008
Score = 207 bits (526), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 104/196 (53%), Positives = 133/196 (67%), Gaps = 20/196 (10%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
P+E++G +IP D+ PNPNG EFDNLYLDMNGI+HPC+HPED+P PKDE+EMM+ IF+
Sbjct: 23 PREIDGVQIPVDTRGPNPNGEEFDNLYLDMNGIVHPCSHPEDRPPPKDEEEMMLEIFKYT 82
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
DR+ +VRPRKLL +AIDGVAPRAKMNQ RSRRFR+++E
Sbjct: 83 DRVVNMVRPRKLLLIAIDGVAPRAKMNQ-------------------QRSRRFRSAQEAK 123
Query: 151 EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
EK A+ A + + L + G K + FDSN ITPGTPFM L++ L Y+I +LN D
Sbjct: 124 EKEADKAELAKMLKSQGGRTEDAAVKKA-FDSNEITPGTPFMDILASSLRYWIALKLNTD 182
Query: 211 PGWKGIKVILSDANVP 226
P W +KVI+SD+ VP
Sbjct: 183 PAWAKMKVIISDSTVP 198
>gi|255542378|ref|XP_002512252.1| 5'->3' exoribonuclease, putative [Ricinus communis]
gi|223548213|gb|EEF49704.1| 5'->3' exoribonuclease, putative [Ricinus communis]
Length = 964
Score = 206 bits (525), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 114/195 (58%), Positives = 134/195 (68%), Gaps = 20/195 (10%)
Query: 32 QEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECID 91
++ NG P D SKPNPNG+EFDNLYLDMNGIIHPC HP+ KP P D++ +IF+ ID
Sbjct: 28 EDSNGVIGPIDISKPNPNGLEFDNLYLDMNGIIHPCFHPDGKPPPPTYDDVFKSIFDYID 87
Query: 92 RLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAE 151
LF +VRPRKLL+MAIDGVAPRAKMNQ RSRRFRA+K+ AE
Sbjct: 88 HLFTLVRPRKLLFMAIDGVAPRAKMNQ-------------------QRSRRFRAAKDAAE 128
Query: 152 KIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDP 211
AE R+R++ A+G +L P KEK DSN ITPGT FMA LS L YY+ RLN++P
Sbjct: 129 AEAEEERLRKEFEAEGKLLSP-KEKPETSDSNVITPGTQFMAVLSTGLQYYVQMRLNHNP 187
Query: 212 GWKGIKVILSDANVP 226
GWK KVILSDANVP
Sbjct: 188 GWKYTKVILSDANVP 202
>gi|242056911|ref|XP_002457601.1| hypothetical protein SORBIDRAFT_03g010040 [Sorghum bicolor]
gi|241929576|gb|EES02721.1| hypothetical protein SORBIDRAFT_03g010040 [Sorghum bicolor]
Length = 1066
Score = 206 bits (525), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 117/189 (61%), Positives = 134/189 (70%), Gaps = 20/189 (10%)
Query: 38 KIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIV 97
K+P D+SKPNPNG+EFDNLYLDMNGIIHPC HPED+P+P E+ +F+ IDRLF +V
Sbjct: 33 KVPVDTSKPNPNGLEFDNLYLDMNGIIHPCFHPEDRPSPTTFAEVFQCMFDYIDRLFVMV 92
Query: 98 RPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVA 157
RPRKLLYMAIDGVAPRAKMNQ RSRRFRA+K+ A+ AE
Sbjct: 93 RPRKLLYMAIDGVAPRAKMNQ-------------------QRSRRFRAAKDAADAAAEEE 133
Query: 158 RIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIK 217
R+RE+ +G LPP K++ DSN ITPGT FMA LS L YYIH RLN DPGWK IK
Sbjct: 134 RLREEFEREGRKLPP-KQQSQTCDSNVITPGTEFMAVLSVALQYYIHLRLNYDPGWKQIK 192
Query: 218 VILSDANVP 226
VILSDANVP
Sbjct: 193 VILSDANVP 201
>gi|313232494|emb|CBY24162.1| unnamed protein product [Oikopleura dioica]
Length = 853
Score = 206 bits (524), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 104/200 (52%), Positives = 134/200 (67%), Gaps = 20/200 (10%)
Query: 28 VSLPQ-EVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAI 86
V PQ E++G +P D S NPNG+EFDNLY+DMNG+IHPC+HPED+PAP++E+E+ I
Sbjct: 22 VEEPQKEIDGVTVPIDLSGANPNGVEFDNLYIDMNGVIHPCSHPEDRPAPRNEEEIFECI 81
Query: 87 FECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRAS 146
F+ +DR+ IVRPRKLLY+AIDG APRAKMNQ RSRRFRA+
Sbjct: 82 FDALDRMMNIVRPRKLLYLAIDGPAPRAKMNQ-------------------QRSRRFRAA 122
Query: 147 KETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDR 206
KE+ + +A + ++ G LPP K FDSNCITPGT FM L+ L +YI +R
Sbjct: 123 KESVQLSELMAEKKLEIERAGGRLPPPDPKKEKFDSNCITPGTEFMDRLAKALRFYISER 182
Query: 207 LNNDPGWKGIKVILSDANVP 226
LN + GW+ + VILSDA+VP
Sbjct: 183 LNKEAGWQELNVILSDASVP 202
>gi|313246745|emb|CBY35616.1| unnamed protein product [Oikopleura dioica]
Length = 853
Score = 206 bits (523), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 104/200 (52%), Positives = 134/200 (67%), Gaps = 20/200 (10%)
Query: 28 VSLPQ-EVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAI 86
V PQ E++G +P D S NPNG+EFDNLY+DMNG+IHPC+HPED+PAP++E+E+ I
Sbjct: 22 VEEPQKEIDGVTVPIDLSGANPNGVEFDNLYIDMNGVIHPCSHPEDRPAPRNEEEIFECI 81
Query: 87 FECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRAS 146
F+ +DR+ IVRPRKLLY+AIDG APRAKMNQ RSRRFRA+
Sbjct: 82 FDALDRMMNIVRPRKLLYLAIDGPAPRAKMNQ-------------------QRSRRFRAA 122
Query: 147 KETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDR 206
KE+ + +A + ++ G LPP K FDSNCITPGT FM L+ L +YI +R
Sbjct: 123 KESVQLSELMAEKKLEIERAGGRLPPPDPKKEKFDSNCITPGTEFMDRLAKALRFYISER 182
Query: 207 LNNDPGWKGIKVILSDANVP 226
LN + GW+ + VILSDA+VP
Sbjct: 183 LNKEAGWQELNVILSDASVP 202
>gi|302697115|ref|XP_003038236.1| hypothetical protein SCHCODRAFT_255205 [Schizophyllum commune H4-8]
gi|300111933|gb|EFJ03334.1| hypothetical protein SCHCODRAFT_255205 [Schizophyllum commune H4-8]
Length = 1480
Score = 205 bits (522), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 106/197 (53%), Positives = 130/197 (65%), Gaps = 20/197 (10%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
P+++ + IP D+S NPNG+EFDNLYLDMNGI+HPCTHPE KPAP+ E+EMMV IF
Sbjct: 34 PRQIGDEVIPIDASGRNPNGVEFDNLYLDMNGIVHPCTHPEGKPAPETEEEMMVEIFNYT 93
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
+R+ +VRPRKLL+MAIDGVAPRAKMNQ RSRRFRAS+E
Sbjct: 94 ERVVNMVRPRKLLFMAIDGVAPRAKMNQ-------------------QRSRRFRASQEAQ 134
Query: 151 EKIAEVARIREKLLADGCILPPE-KEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNN 209
EK A E + G L E K + +DSN ITPGTPFM L+ L Y+ ++N
Sbjct: 135 EKEDARAESLELWKSMGKELTDEMKNPKAAWDSNAITPGTPFMTLLANSLRYWTVQKMNE 194
Query: 210 DPGWKGIKVILSDANVP 226
DP WKGI+VI+SDA+VP
Sbjct: 195 DPAWKGIQVIISDASVP 211
>gi|359487905|ref|XP_002271987.2| PREDICTED: 5'-3' exoribonuclease 4-like [Vitis vinifera]
Length = 950
Score = 205 bits (522), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 114/205 (55%), Positives = 135/205 (65%), Gaps = 20/205 (9%)
Query: 22 YSFASLVSLPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDE 81
Y A + + +E + D S+PNPNGMEFDNLYLDMNGIIHPC HP+ KPAP D+
Sbjct: 14 YPLAVMDVVEEEPSEGGAEIDVSRPNPNGMEFDNLYLDMNGIIHPCFHPDGKPAPTTYDD 73
Query: 82 MMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSR 141
+ +IF+ ID LF +VRPR+LLYMAIDGVAPRAKMNQ RSR
Sbjct: 74 VFKSIFDYIDHLFSLVRPRRLLYMAIDGVAPRAKMNQ-------------------QRSR 114
Query: 142 RFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHY 201
RFRA+K+ AE AE R+R++ +G +L P KEK DSN ITPGT FMA LS L Y
Sbjct: 115 RFRAAKDAAEAEAEEERLRKEFEVEGKMLSP-KEKPETSDSNVITPGTKFMAVLSVALQY 173
Query: 202 YIHDRLNNDPGWKGIKVILSDANVP 226
YIH RLN +PGW KVILSD+NVP
Sbjct: 174 YIHSRLNRNPGWCSTKVILSDSNVP 198
>gi|156034478|ref|XP_001585658.1| hypothetical protein SS1G_13542 [Sclerotinia sclerotiorum 1980]
gi|154698945|gb|EDN98683.1| hypothetical protein SS1G_13542 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 931
Score = 205 bits (522), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 105/196 (53%), Positives = 130/196 (66%), Gaps = 20/196 (10%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
P+E++GQ IP D PNPNG E DNLYLDMNGI+HPC+HPED+P PKDE+EMM+ IF+
Sbjct: 26 PREIDGQIIPIDIRGPNPNGEECDNLYLDMNGIVHPCSHPEDRPPPKDEEEMMLEIFKYT 85
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
DR+ +VRPRKLL +AIDGVAPRAKMNQ RSRRFRA++E
Sbjct: 86 DRVVNMVRPRKLLMIAIDGVAPRAKMNQ-------------------QRSRRFRAAQEAK 126
Query: 151 EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
EK + A + + L + G E E +DSN ITPGTPFM L+A L Y+I +LN D
Sbjct: 127 EKAEDKAELLKMLKSQGT-QAEETEVKKAWDSNEITPGTPFMDILAASLRYWIAYKLNTD 185
Query: 211 PGWKGIKVILSDANVP 226
P W +KVI+SD+ VP
Sbjct: 186 PAWAKMKVIISDSTVP 201
>gi|357512203|ref|XP_003626390.1| 5'-3' exoribonuclease [Medicago truncatula]
gi|355501405|gb|AES82608.1| 5'-3' exoribonuclease [Medicago truncatula]
Length = 956
Score = 205 bits (522), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 116/212 (54%), Positives = 134/212 (63%), Gaps = 23/212 (10%)
Query: 18 DSKPYSFASLVS---LPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKP 74
D P S +V P G P D S+PNPNGMEFDNLYLDMNGIIHPC HP+ KP
Sbjct: 12 DRYPRSIVDVVEEAPSPSVAGGPPFPVDVSRPNPNGMEFDNLYLDMNGIIHPCFHPDGKP 71
Query: 75 APKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYST 134
AP D++ ++F+ ID LF +VRPRKLLY+AIDGVAPRAKMNQ
Sbjct: 72 APATYDDVFKSMFDYIDHLFSLVRPRKLLYLAIDGVAPRAKMNQ---------------- 115
Query: 135 WQLMRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMAC 194
RSRRFRA+K+ AE AE R+R + AD L KEK DSN ITPGTPFMA
Sbjct: 116 ---QRSRRFRAAKDAAEAEAEEERLRNE-FADQIELLTSKEKTETHDSNVITPGTPFMAV 171
Query: 195 LSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LS L YYI RLN +PGW+ KV+LSD+NVP
Sbjct: 172 LSVALQYYIQTRLNYNPGWRNTKVMLSDSNVP 203
>gi|226289075|gb|EEH44587.1| 5'-3' exoribonuclease [Paracoccidioides brasiliensis Pb18]
Length = 1049
Score = 205 bits (521), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 108/211 (51%), Positives = 139/211 (65%), Gaps = 24/211 (11%)
Query: 21 PYSFASLVS-LPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDE 79
P +S+V LPQE+N Q++P D++KPNPNG E DNLYLDMNGI+HPCTHPE KP P +E
Sbjct: 15 PKIISSVVEELPQEINEQEVPVDTTKPNPNGEEMDNLYLDMNGIVHPCTHPEGKPPPSNE 74
Query: 80 DEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMR 139
+EMM+ IF+ DR+ +VRPRKLL +A+DGVAPRAKMNQ R
Sbjct: 75 EEMMLEIFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQ-------------------QR 115
Query: 140 SRRFRA---SKETAEKIAEVAR-IREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACL 195
SRRFR+ +KE EK E A+ +R++ C E+ +DSN ITPGTPFM L
Sbjct: 116 SRRFRSAQEAKEADEKKVEFAKLLRKQNGKKSCEEIVEEVTMKTWDSNVITPGTPFMDIL 175
Query: 196 SACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
+A L Y++ +LN DP W+ +KVI+SDA VP
Sbjct: 176 AAALRYWVAYKLNTDPAWEKLKVIISDATVP 206
>gi|298204908|emb|CBI34215.3| unnamed protein product [Vitis vinifera]
Length = 1083
Score = 205 bits (521), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 114/205 (55%), Positives = 135/205 (65%), Gaps = 20/205 (9%)
Query: 22 YSFASLVSLPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDE 81
Y A + + +E + D S+PNPNGMEFDNLYLDMNGIIHPC HP+ KPAP D+
Sbjct: 14 YPLAVMDVVEEEPSEGGAEIDVSRPNPNGMEFDNLYLDMNGIIHPCFHPDGKPAPTTYDD 73
Query: 82 MMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSR 141
+ +IF+ ID LF +VRPR+LLYMAIDGVAPRAKMNQ RSR
Sbjct: 74 VFKSIFDYIDHLFSLVRPRRLLYMAIDGVAPRAKMNQ-------------------QRSR 114
Query: 142 RFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHY 201
RFRA+K+ AE AE R+R++ +G +L P KEK DSN ITPGT FMA LS L Y
Sbjct: 115 RFRAAKDAAEAEAEEERLRKEFEVEGKMLSP-KEKPETSDSNVITPGTKFMAVLSVALQY 173
Query: 202 YIHDRLNNDPGWKGIKVILSDANVP 226
YIH RLN +PGW KVILSD+NVP
Sbjct: 174 YIHSRLNRNPGWCSTKVILSDSNVP 198
>gi|125588231|gb|EAZ28895.1| hypothetical protein OsJ_12935 [Oryza sativa Japonica Group]
Length = 997
Score = 204 bits (520), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 109/191 (57%), Positives = 130/191 (68%), Gaps = 20/191 (10%)
Query: 36 GQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFR 95
G +P D +PNPNG+EFDNLYLDMNGIIHPC HPE +PAP DE+ +IF ID LF
Sbjct: 32 GAFVPVDLRRPNPNGLEFDNLYLDMNGIIHPCFHPEGRPAPTTYDEVFKSIFAYIDHLFG 91
Query: 96 IVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAE 155
+VRPRKL+YMAIDGVAPRAKMNQ RSRRFRA+K+ A+ AE
Sbjct: 92 LVRPRKLIYMAIDGVAPRAKMNQ-------------------QRSRRFRAAKDAADAAAE 132
Query: 156 VARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKG 215
R+R++ A+G L KEK DSN ITPGTPFM LS+ L YYI RLN+ PGW+
Sbjct: 133 EERLRKEFEAEGRTL-VAKEKSEAIDSNVITPGTPFMFVLSSALQYYIQLRLNHTPGWQS 191
Query: 216 IKVILSDANVP 226
+KV+LSD+NVP
Sbjct: 192 VKVMLSDSNVP 202
>gi|108711532|gb|ABF99327.1| 5'-3' exoribonuclease, putative, expressed [Oryza sativa Japonica
Group]
Length = 682
Score = 204 bits (520), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 109/191 (57%), Positives = 130/191 (68%), Gaps = 20/191 (10%)
Query: 36 GQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFR 95
G +P D +PNPNG+EFDNLYLDMNGIIHPC HPE +PAP DE+ +IF ID LF
Sbjct: 32 GAFVPVDLRRPNPNGLEFDNLYLDMNGIIHPCFHPEGRPAPTTYDEVFKSIFAYIDHLFG 91
Query: 96 IVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAE 155
+VRPRKL+YMAIDGVAPRAKMNQ RSRRFRA+K+ A+ AE
Sbjct: 92 LVRPRKLIYMAIDGVAPRAKMNQ-------------------QRSRRFRAAKDAADAAAE 132
Query: 156 VARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKG 215
R+R++ A+G L KEK DSN ITPGTPFM LS+ L YYI RLN+ PGW+
Sbjct: 133 EERLRKEFEAEGRTLVA-KEKSEAIDSNVITPGTPFMFVLSSALQYYIQLRLNHTPGWQS 191
Query: 216 IKVILSDANVP 226
+KV+LSD+NVP
Sbjct: 192 VKVMLSDSNVP 202
>gi|125546024|gb|EAY92163.1| hypothetical protein OsI_13876 [Oryza sativa Indica Group]
Length = 997
Score = 204 bits (520), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 109/191 (57%), Positives = 130/191 (68%), Gaps = 20/191 (10%)
Query: 36 GQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFR 95
G +P D +PNPNG+EFDNLYLDMNGIIHPC HPE +PAP DE+ +IF ID LF
Sbjct: 32 GAFVPVDLRRPNPNGLEFDNLYLDMNGIIHPCFHPEGRPAPTTYDEVFKSIFAYIDHLFG 91
Query: 96 IVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAE 155
+VRPRKL+YMAIDGVAPRAKMNQ RSRRFRA+K+ A+ AE
Sbjct: 92 LVRPRKLIYMAIDGVAPRAKMNQ-------------------QRSRRFRAAKDAADAAAE 132
Query: 156 VARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKG 215
R+R++ A+G L KEK DSN ITPGTPFM LS+ L YYI RLN+ PGW+
Sbjct: 133 EERLRKEFEAEGRTL-VAKEKSEAIDSNVITPGTPFMFVLSSALQYYIQLRLNHTPGWQS 191
Query: 216 IKVILSDANVP 226
+KV+LSD+NVP
Sbjct: 192 VKVMLSDSNVP 202
>gi|414876882|tpg|DAA54013.1| TPA: hypothetical protein ZEAMMB73_402768 [Zea mays]
Length = 591
Score = 204 bits (520), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 115/189 (60%), Positives = 133/189 (70%), Gaps = 20/189 (10%)
Query: 38 KIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIV 97
K+P D+SKPNPN +EFDNLYLDMNGIIHPC HPED+P+P E+ +F+ IDRLF +V
Sbjct: 33 KVPVDTSKPNPNSLEFDNLYLDMNGIIHPCFHPEDRPSPTTFGEVFQCMFDYIDRLFVMV 92
Query: 98 RPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVA 157
RPR+LLYMAIDGVAPRAKMNQ RSRRFRA+K+ A+ AE
Sbjct: 93 RPRRLLYMAIDGVAPRAKMNQ-------------------QRSRRFRAAKDAADAAAEEE 133
Query: 158 RIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIK 217
R+RE+ +G LPP K++ DSN ITPGT FMA LS L YYIH RLN DPGWK IK
Sbjct: 134 RLREEFEREGRKLPP-KQQSQTCDSNVITPGTEFMAVLSVALQYYIHRRLNYDPGWKQIK 192
Query: 218 VILSDANVP 226
VILSDANVP
Sbjct: 193 VILSDANVP 201
>gi|115455883|ref|NP_001051542.1| Os03g0794800 [Oryza sativa Japonica Group]
gi|50400038|gb|AAT76426.1| putative 5'-3' exonuclease [Oryza sativa Japonica Group]
gi|108711531|gb|ABF99326.1| 5'-3' exoribonuclease, putative, expressed [Oryza sativa Japonica
Group]
gi|113550013|dbj|BAF13456.1| Os03g0794800 [Oryza sativa Japonica Group]
Length = 988
Score = 204 bits (520), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 109/191 (57%), Positives = 130/191 (68%), Gaps = 20/191 (10%)
Query: 36 GQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFR 95
G +P D +PNPNG+EFDNLYLDMNGIIHPC HPE +PAP DE+ +IF ID LF
Sbjct: 32 GAFVPVDLRRPNPNGLEFDNLYLDMNGIIHPCFHPEGRPAPTTYDEVFKSIFAYIDHLFG 91
Query: 96 IVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAE 155
+VRPRKL+YMAIDGVAPRAKMNQ RSRRFRA+K+ A+ AE
Sbjct: 92 LVRPRKLIYMAIDGVAPRAKMNQ-------------------QRSRRFRAAKDAADAAAE 132
Query: 156 VARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKG 215
R+R++ A+G L KEK DSN ITPGTPFM LS+ L YYI RLN+ PGW+
Sbjct: 133 EERLRKEFEAEGRTL-VAKEKSEAIDSNVITPGTPFMFVLSSALQYYIQLRLNHTPGWQS 191
Query: 216 IKVILSDANVP 226
+KV+LSD+NVP
Sbjct: 192 VKVMLSDSNVP 202
>gi|350289466|gb|EGZ70691.1| hypothetical protein NEUTE2DRAFT_92294 [Neurospora tetrasperma FGSC
2509]
Length = 531
Score = 204 bits (520), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 107/197 (54%), Positives = 129/197 (65%), Gaps = 25/197 (12%)
Query: 35 NGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLF 94
+G IP D++KPNPNG EFDNLYLDMNGI+HPC+HPED+PAPKDE+EMMV +F+ DR+
Sbjct: 31 DGTVIPVDATKPNPNGEEFDNLYLDMNGIVHPCSHPEDRPAPKDEEEMMVEVFKYTDRVV 90
Query: 95 RIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIA 154
+VRPRKLL +A+DGVAPRAKMNQ RSRRFRA++E EK
Sbjct: 91 NMVRPRKLLMIAVDGVAPRAKMNQ-------------------QRSRRFRAAREAMEKEE 131
Query: 155 EVARIREKLLADGCILPPEKEK-----GSHFDSNCITPGTPFMACLSACLHYYIHDRLNN 209
+ + E LL P E+E FDSN ITPGTPFM L+A L Y+ +LN
Sbjct: 132 DKQKFVE-LLKKQNGKPQEEEPVEIVVKKAFDSNSITPGTPFMDILAASLRYWCSYKLNT 190
Query: 210 DPGWKGIKVILSDANVP 226
DP W IKVI+SDA VP
Sbjct: 191 DPAWANIKVIISDATVP 207
>gi|19571126|dbj|BAB86550.1| putative 5-3 exoribonuclease [Oryza sativa Japonica Group]
Length = 1064
Score = 204 bits (520), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 115/189 (60%), Positives = 134/189 (70%), Gaps = 20/189 (10%)
Query: 38 KIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIV 97
K+P D+SKPNPNG+EFDNLYLDMNGIIHPC HPED+P+P E+ +F+ IDRLF +V
Sbjct: 33 KVPVDTSKPNPNGLEFDNLYLDMNGIIHPCFHPEDRPSPTTFAEVFQCMFDYIDRLFVMV 92
Query: 98 RPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVA 157
RPRKL+YMAIDGVAPRAKMNQ RSRRFRA+K+ A+ AE
Sbjct: 93 RPRKLMYMAIDGVAPRAKMNQ-------------------QRSRRFRAAKDAADAAAEEE 133
Query: 158 RIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIK 217
R+RE+ +G LPP K++ DSN ITPGT FMA LS L YYIH RLN DPGWK +K
Sbjct: 134 RLREEFEREGRKLPP-KQQSQTCDSNVITPGTEFMAVLSIALQYYIHLRLNYDPGWKQVK 192
Query: 218 VILSDANVP 226
VILSDANVP
Sbjct: 193 VILSDANVP 201
>gi|115441335|ref|NP_001044947.1| Os01g0872700 [Oryza sativa Japonica Group]
gi|56785082|dbj|BAD82721.1| putative 5'-3' exoribonuclease (XRN3) [Oryza sativa Japonica Group]
gi|113534478|dbj|BAF06861.1| Os01g0872700 [Oryza sativa Japonica Group]
gi|215713440|dbj|BAG94577.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 1068
Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 115/189 (60%), Positives = 134/189 (70%), Gaps = 20/189 (10%)
Query: 38 KIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIV 97
K+P D+SKPNPNG+EFDNLYLDMNGIIHPC HPED+P+P E+ +F+ IDRLF +V
Sbjct: 33 KVPVDTSKPNPNGLEFDNLYLDMNGIIHPCFHPEDRPSPTTFAEVFQCMFDYIDRLFVMV 92
Query: 98 RPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVA 157
RPRKL+YMAIDGVAPRAKMNQ RSRRFRA+K+ A+ AE
Sbjct: 93 RPRKLMYMAIDGVAPRAKMNQ-------------------QRSRRFRAAKDAADAAAEEE 133
Query: 158 RIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIK 217
R+RE+ +G LPP K++ DSN ITPGT FMA LS L YYIH RLN DPGWK +K
Sbjct: 134 RLREEFEREGRKLPP-KQQSQTCDSNVITPGTEFMAVLSIALQYYIHLRLNYDPGWKQVK 192
Query: 218 VILSDANVP 226
VILSDANVP
Sbjct: 193 VILSDANVP 201
>gi|222619617|gb|EEE55749.1| hypothetical protein OsJ_04252 [Oryza sativa Japonica Group]
Length = 1042
Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 115/189 (60%), Positives = 134/189 (70%), Gaps = 20/189 (10%)
Query: 38 KIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIV 97
K+P D+SKPNPNG+EFDNLYLDMNGIIHPC HPED+P+P E+ +F+ IDRLF +V
Sbjct: 33 KVPVDTSKPNPNGLEFDNLYLDMNGIIHPCFHPEDRPSPTTFAEVFQCMFDYIDRLFVMV 92
Query: 98 RPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVA 157
RPRKL+YMAIDGVAPRAKMNQ RSRRFRA+K+ A+ AE
Sbjct: 93 RPRKLMYMAIDGVAPRAKMNQ-------------------QRSRRFRAAKDAADAAAEEE 133
Query: 158 RIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIK 217
R+RE+ +G LPP K++ DSN ITPGT FMA LS L YYIH RLN DPGWK +K
Sbjct: 134 RLREEFEREGRKLPP-KQQSQTCDSNVITPGTEFMAVLSIALQYYIHLRLNYDPGWKQVK 192
Query: 218 VILSDANVP 226
VILSDANVP
Sbjct: 193 VILSDANVP 201
>gi|307136058|gb|ADN33909.1| 5'-3' exoribonuclease [Cucumis melo subsp. melo]
Length = 934
Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 113/192 (58%), Positives = 129/192 (67%), Gaps = 20/192 (10%)
Query: 35 NGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLF 94
NG +P D SKPNPNGMEFDNLYLDMNGIIHPC HPE KP P D + +IF+ ID LF
Sbjct: 31 NGVLLPIDVSKPNPNGMEFDNLYLDMNGIIHPCFHPEGKPPPATYDAVFKSIFDYIDHLF 90
Query: 95 RIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIA 154
+VRPRK+LYMAIDGVAPRAKMNQ RSRRFRA+K+ AE A
Sbjct: 91 SLVRPRKVLYMAIDGVAPRAKMNQ-------------------QRSRRFRAAKDAAEAEA 131
Query: 155 EVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWK 214
E R+R++ A+G L P KEK DSN ITPGT FM LS L YY RLN++PGW+
Sbjct: 132 EEERLRKEFEAEGQTLLP-KEKPETCDSNVITPGTEFMGVLSVALQYYAQSRLNHNPGWR 190
Query: 215 GIKVILSDANVP 226
KVILSD+NVP
Sbjct: 191 FTKVILSDSNVP 202
>gi|357512205|ref|XP_003626391.1| 5'-3' exoribonuclease [Medicago truncatula]
gi|355501406|gb|AES82609.1| 5'-3' exoribonuclease [Medicago truncatula]
Length = 629
Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 112/196 (57%), Positives = 129/196 (65%), Gaps = 20/196 (10%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
P G P D S+PNPNGMEFDNLYLDMNGIIHPC HP+ KPAP D++ ++F+ I
Sbjct: 28 PSVAGGPPFPVDVSRPNPNGMEFDNLYLDMNGIIHPCFHPDGKPAPATYDDVFKSMFDYI 87
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
D LF +VRPRKLLY+AIDGVAPRAKMNQ RSRRFRA+K+ A
Sbjct: 88 DHLFSLVRPRKLLYLAIDGVAPRAKMNQ-------------------QRSRRFRAAKDAA 128
Query: 151 EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
E AE R+R + AD L KEK DSN ITPGTPFMA LS L YYI RLN +
Sbjct: 129 EAEAEEERLRNE-FADQIELLTSKEKTETHDSNVITPGTPFMAVLSVALQYYIQTRLNYN 187
Query: 211 PGWKGIKVILSDANVP 226
PGW+ KV+LSD+NVP
Sbjct: 188 PGWRNTKVMLSDSNVP 203
>gi|125528546|gb|EAY76660.1| hypothetical protein OsI_04616 [Oryza sativa Indica Group]
Length = 1068
Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 115/189 (60%), Positives = 134/189 (70%), Gaps = 20/189 (10%)
Query: 38 KIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIV 97
K+P D+SKPNPNG+EFDNLYLDMNGIIHPC HPED+P+P E+ +F+ IDRLF +V
Sbjct: 33 KVPVDTSKPNPNGLEFDNLYLDMNGIIHPCFHPEDRPSPTTFAEVFQCMFDYIDRLFVMV 92
Query: 98 RPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVA 157
RPRKL+YMAIDGVAPRAKMNQ RSRRFRA+K+ A+ AE
Sbjct: 93 RPRKLMYMAIDGVAPRAKMNQ-------------------QRSRRFRAAKDAADAAAEEE 133
Query: 158 RIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIK 217
R+RE+ +G LPP K++ DSN ITPGT FMA LS L YYIH RLN DPGWK +K
Sbjct: 134 RLREEFEREGRKLPP-KQQSQTCDSNVITPGTEFMAVLSIALQYYIHLRLNYDPGWKQVK 192
Query: 218 VILSDANVP 226
VILSDANVP
Sbjct: 193 VILSDANVP 201
>gi|414876883|tpg|DAA54014.1| TPA: hypothetical protein ZEAMMB73_402768 [Zea mays]
Length = 1066
Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 115/189 (60%), Positives = 133/189 (70%), Gaps = 20/189 (10%)
Query: 38 KIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIV 97
K+P D+SKPNPN +EFDNLYLDMNGIIHPC HPED+P+P E+ +F+ IDRLF +V
Sbjct: 33 KVPVDTSKPNPNSLEFDNLYLDMNGIIHPCFHPEDRPSPTTFGEVFQCMFDYIDRLFVMV 92
Query: 98 RPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVA 157
RPR+LLYMAIDGVAPRAKMNQ RSRRFRA+K+ A+ AE
Sbjct: 93 RPRRLLYMAIDGVAPRAKMNQ-------------------QRSRRFRAAKDAADAAAEEE 133
Query: 158 RIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIK 217
R+RE+ +G LPP K++ DSN ITPGT FMA LS L YYIH RLN DPGWK IK
Sbjct: 134 RLREEFEREGRKLPP-KQQSQTCDSNVITPGTEFMAVLSVALQYYIHRRLNYDPGWKQIK 192
Query: 218 VILSDANVP 226
VILSDANVP
Sbjct: 193 VILSDANVP 201
>gi|108711533|gb|ABF99328.1| 5'-3' exoribonuclease, putative, expressed [Oryza sativa Japonica
Group]
Length = 718
Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 109/191 (57%), Positives = 130/191 (68%), Gaps = 20/191 (10%)
Query: 36 GQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFR 95
G +P D +PNPNG+EFDNLYLDMNGIIHPC HPE +PAP DE+ +IF ID LF
Sbjct: 32 GAFVPVDLRRPNPNGLEFDNLYLDMNGIIHPCFHPEGRPAPTTYDEVFKSIFAYIDHLFG 91
Query: 96 IVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAE 155
+VRPRKL+YMAIDGVAPRAKMNQ RSRRFRA+K+ A+ AE
Sbjct: 92 LVRPRKLIYMAIDGVAPRAKMNQ-------------------QRSRRFRAAKDAADAAAE 132
Query: 156 VARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKG 215
R+R++ A+G L KEK DSN ITPGTPFM LS+ L YYI RLN+ PGW+
Sbjct: 133 EERLRKEFEAEGRTL-VAKEKSEAIDSNVITPGTPFMFVLSSALQYYIQLRLNHTPGWQS 191
Query: 216 IKVILSDANVP 226
+KV+LSD+NVP
Sbjct: 192 VKVMLSDSNVP 202
>gi|336468281|gb|EGO56444.1| hypothetical protein NEUTE1DRAFT_130400 [Neurospora tetrasperma
FGSC 2508]
Length = 513
Score = 204 bits (518), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 107/197 (54%), Positives = 129/197 (65%), Gaps = 25/197 (12%)
Query: 35 NGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLF 94
+G IP D++KPNPNG EFDNLYLDMNGI+HPC+HPED+PAPKDE+EMMV +F+ DR+
Sbjct: 31 DGTVIPVDATKPNPNGEEFDNLYLDMNGIVHPCSHPEDRPAPKDEEEMMVEVFKYTDRVV 90
Query: 95 RIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIA 154
+VRPRKLL +A+DGVAPRAKMNQ RSRRFRA++E EK
Sbjct: 91 NMVRPRKLLMIAVDGVAPRAKMNQ-------------------QRSRRFRAAREAMEKEE 131
Query: 155 EVARIREKLLADGCILPPEKEK-----GSHFDSNCITPGTPFMACLSACLHYYIHDRLNN 209
+ + E LL P E+E FDSN ITPGTPFM L+A L Y+ +LN
Sbjct: 132 DKQKFVE-LLKKQNGKPQEEEPVEIVVKKAFDSNSITPGTPFMDILAASLRYWCSYKLNT 190
Query: 210 DPGWKGIKVILSDANVP 226
DP W IKVI+SDA VP
Sbjct: 191 DPAWANIKVIISDATVP 207
>gi|67516851|ref|XP_658311.1| hypothetical protein AN0707.2 [Aspergillus nidulans FGSC A4]
gi|74598763|sp|Q5BFH3.3|XRN2_EMENI RecName: Full=5'-3' exoribonuclease 2
gi|40746327|gb|EAA65483.1| hypothetical protein AN0707.2 [Aspergillus nidulans FGSC A4]
gi|259489019|tpe|CBF88946.1| TPA: 5'-3' exoribonuclease 2 (EC 3.1.13.-)
[Source:UniProtKB/Swiss-Prot;Acc:Q5BFH3] [Aspergillus
nidulans FGSC A4]
Length = 1032
Score = 203 bits (517), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 104/200 (52%), Positives = 130/200 (65%), Gaps = 22/200 (11%)
Query: 30 LPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFEC 89
LPQEVNG++IP D + PNPNG E DNLYLDMNGI+HPCTHPE KP P +E EMM+ IF+
Sbjct: 25 LPQEVNGEEIPVDITGPNPNGEEMDNLYLDMNGIVHPCTHPEGKPPPANEQEMMIEIFKY 84
Query: 90 IDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKET 149
DR+ +VRPRKLL +A+DGVAPRAKMNQ R+RRFR+++E
Sbjct: 85 TDRVVNMVRPRKLLMIAVDGVAPRAKMNQ-------------------QRARRFRSAQEA 125
Query: 150 A---EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDR 206
EK E R+ K D + E+ +DSN ITPGTPFM L+A L Y+I +
Sbjct: 126 REQDEKKQEFQRMLAKQNGDKEQMLQEEVIQKTWDSNVITPGTPFMDILAASLRYWIAYK 185
Query: 207 LNNDPGWKGIKVILSDANVP 226
LN DP W+ +K+I+SDA VP
Sbjct: 186 LNTDPAWEKLKIIISDATVP 205
>gi|330916061|ref|XP_003297277.1| hypothetical protein PTT_07622 [Pyrenophora teres f. teres 0-1]
gi|311330133|gb|EFQ94619.1| hypothetical protein PTT_07622 [Pyrenophora teres f. teres 0-1]
Length = 883
Score = 202 bits (515), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 106/202 (52%), Positives = 129/202 (63%), Gaps = 24/202 (11%)
Query: 30 LPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFEC 89
LP++V IP D + PNPNG EFDNLYLDMNGI+HPC+HPEDKPAPK E +MM+AIFE
Sbjct: 25 LPKKVGDAVIPVDRTGPNPNGEEFDNLYLDMNGIVHPCSHPEDKPAPKTEADMMMAIFEY 84
Query: 90 IDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKET 149
DR+ +VRPRKLLYMA+DGVAPRAKMNQ RSRRFRA++E
Sbjct: 85 TDRVVGMVRPRKLLYMAVDGVAPRAKMNQ-------------------QRSRRFRAAREA 125
Query: 150 AEKIAEVARIREKLLADGC-----ILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIH 204
EK E A ++ L + I E+ +DSN ITPGTPFM L+ L Y+
Sbjct: 126 KEKDEERAEFQKILNSQKASRGEDIDTLEEVMEKTWDSNAITPGTPFMHLLAESLQYWCA 185
Query: 205 DRLNNDPGWKGIKVILSDANVP 226
+ DP WK +KVI+SDA+VP
Sbjct: 186 YKFTTDPSWKDMKVIISDASVP 207
>gi|347837816|emb|CCD52388.1| similar to 5'-3' exoribonuclease 2 [Botryotinia fuckeliana]
Length = 966
Score = 202 bits (513), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 103/196 (52%), Positives = 130/196 (66%), Gaps = 20/196 (10%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
P+E++GQ IP D PNPNG E DNLYLDMNGI+HPC+HPED+P PKDE+EMM+ IF+
Sbjct: 26 PREIDGQIIPIDIRGPNPNGEECDNLYLDMNGIVHPCSHPEDRPPPKDEEEMMLEIFKYT 85
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
DR+ +VRPRKLL +AIDGVAPRAKMNQ RSRRFR+++E
Sbjct: 86 DRVVNMVRPRKLLMIAIDGVAPRAKMNQ-------------------QRSRRFRSAQEAK 126
Query: 151 EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
EK + A + + L + G + E E +DSN ITPGTPFM L+ L Y+I +LN D
Sbjct: 127 EKAEDKAELLKMLKSQGSHI-EETEVKKAWDSNEITPGTPFMDILALSLRYWIAYKLNTD 185
Query: 211 PGWKGIKVILSDANVP 226
P W +KVI+SD+ VP
Sbjct: 186 PAWAKMKVIISDSTVP 201
>gi|342889646|gb|EGU88669.1| hypothetical protein FOXB_00813 [Fusarium oxysporum Fo5176]
Length = 3523
Score = 202 bits (513), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 102/197 (51%), Positives = 130/197 (65%), Gaps = 25/197 (12%)
Query: 35 NGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLF 94
+G IP D+++PNPNG EFDNLYLDMNGI+HPC+HPED+PAPKDE+EMM+ +F DR+
Sbjct: 31 DGSTIPVDTTRPNPNGEEFDNLYLDMNGIVHPCSHPEDRPAPKDEEEMMMEVFRYTDRVV 90
Query: 95 RIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIA 154
+VRPRK+L +A+DGVAPRAKMNQ RSRRFR+++E EK
Sbjct: 91 NMVRPRKILMIAVDGVAPRAKMNQ-------------------QRSRRFRSAQEAQEKEK 131
Query: 155 EVARIREKLL--ADGCILPPEKEKG---SHFDSNCITPGTPFMACLSACLHYYIHDRLNN 209
+ + KLL +G L E E+ FDSN ITPGTPFM L+ L Y+ +LN
Sbjct: 132 DKQELI-KLLKQQNGGNLTAESEETVLKKAFDSNSITPGTPFMDILALSLRYWCQYKLNT 190
Query: 210 DPGWKGIKVILSDANVP 226
DPGW +K+I+SDA VP
Sbjct: 191 DPGWAKLKIIISDATVP 207
>gi|189191016|ref|XP_001931847.1| 5'-3' exoribonuclease 2 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187973453|gb|EDU40952.1| 5'-3' exoribonuclease 2 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 1104
Score = 202 bits (513), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 106/202 (52%), Positives = 129/202 (63%), Gaps = 24/202 (11%)
Query: 30 LPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFEC 89
LP++V IP D + PNPNG EFDNLYLDMNGI+HPC+HPEDKPAPK E +MM+AIFE
Sbjct: 25 LPKKVGDAVIPVDRTGPNPNGEEFDNLYLDMNGIVHPCSHPEDKPAPKTEADMMMAIFEY 84
Query: 90 IDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKET 149
DR+ +VRPRKLLYMA+DGVAPRAKMNQ RSRRFRA++E
Sbjct: 85 TDRVVGMVRPRKLLYMAVDGVAPRAKMNQ-------------------QRSRRFRAAREA 125
Query: 150 AEKIAEVARIREKLLADGC-----ILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIH 204
EK E A ++ L + I E+ +DSN ITPGTPFM L+ L Y+
Sbjct: 126 KEKDEERAEFQKILNSQKASRGEDINTLEEVVEKTWDSNAITPGTPFMHLLAESLQYWCA 185
Query: 205 DRLNNDPGWKGIKVILSDANVP 226
+ DP WK +KVI+SDA+VP
Sbjct: 186 YKFTTDPSWKDMKVIISDASVP 207
>gi|449442897|ref|XP_004139217.1| PREDICTED: 5'-3' exoribonuclease 4-like [Cucumis sativus]
Length = 934
Score = 202 bits (513), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 112/192 (58%), Positives = 128/192 (66%), Gaps = 20/192 (10%)
Query: 35 NGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLF 94
+G P D SKPNPNGMEFDNLYLDMNGIIHPC HPE KP P D + +IF+ ID LF
Sbjct: 31 SGVLFPIDVSKPNPNGMEFDNLYLDMNGIIHPCFHPEGKPPPATYDAVFKSIFDYIDHLF 90
Query: 95 RIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIA 154
+VRPRK+LYMAIDGVAPRAKMNQ RSRRFRA+K+ AE A
Sbjct: 91 SLVRPRKVLYMAIDGVAPRAKMNQ-------------------QRSRRFRAAKDAAEAEA 131
Query: 155 EVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWK 214
E R+R++ A+G L P KEK DSN ITPGT FM LS L YY RLN++PGW+
Sbjct: 132 EEERLRKEFEAEGQTLLP-KEKPETCDSNVITPGTEFMGVLSVALQYYAQSRLNHNPGWR 190
Query: 215 GIKVILSDANVP 226
KVILSD+NVP
Sbjct: 191 FTKVILSDSNVP 202
>gi|346979187|gb|EGY22639.1| 5'-3' exoribonuclease [Verticillium dahliae VdLs.17]
Length = 1013
Score = 202 bits (513), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 102/199 (51%), Positives = 130/199 (65%), Gaps = 23/199 (11%)
Query: 32 QEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECID 91
Q +G IP D++ PNPNG E DNLYLDMNGI+HPC+HPED+PAPKDE+EMM+ +F D
Sbjct: 28 QMEDGTTIPVDTTGPNPNGEELDNLYLDMNGIVHPCSHPEDRPAPKDEEEMMLEVFRYTD 87
Query: 92 RLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAE 151
R+ +VRPRKLL +A+DGVAPRAKMNQ RSRRFR+++E E
Sbjct: 88 RVVNMVRPRKLLMIAVDGVAPRAKMNQ-------------------QRSRRFRSAQEAQE 128
Query: 152 KIAEVARIREKL-LADGCILPPEKEKGSH---FDSNCITPGTPFMACLSACLHYYIHDRL 207
K + + + L +G ILPPE + + FDSN ITPGTPFM L+ L Y+ +L
Sbjct: 129 KEVDKQELLKLLKQQNGGILPPETLESMNKKAFDSNSITPGTPFMDTLATSLRYWCAYKL 188
Query: 208 NNDPGWKGIKVILSDANVP 226
N DP W +K+I+SDA VP
Sbjct: 189 NTDPAWARLKIIISDATVP 207
>gi|312089591|ref|XP_003146304.1| hypothetical protein LOAG_10732 [Loa loa]
Length = 686
Score = 202 bits (513), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 104/196 (53%), Positives = 124/196 (63%), Gaps = 44/196 (22%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
P+++NG +IP ++ PNPN EFDNLYLDMNGIIHPCTHPED+P+PK E+EM IFE I
Sbjct: 26 PRDMNGVRIPVNTVDPNPNFQEFDNLYLDMNGIIHPCTHPEDRPSPKTEEEMFTLIFEYI 85
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
DRLF IVRPRKLLYMAIDGVAPRAKMNQ RSRRFRASKE
Sbjct: 86 DRLFAIVRPRKLLYMAIDGVAPRAKMNQ-------------------QRSRRFRASKEAI 126
Query: 151 EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
EK+ ++A R +L ++G L+ L YY+H RLN+D
Sbjct: 127 EKVEQIAETRSRLESEG-------------------------YPLAVALRYYVHQRLNSD 161
Query: 211 PGWKGIKVILSDANVP 226
PGW+ + VILSDANVP
Sbjct: 162 PGWEKVAVILSDANVP 177
>gi|413932824|gb|AFW67375.1| hypothetical protein ZEAMMB73_239358 [Zea mays]
Length = 652
Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 107/191 (56%), Positives = 129/191 (67%), Gaps = 20/191 (10%)
Query: 36 GQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFR 95
G +P D +PNPNG+EFDNLYLDMNGIIHPC HPE +PAP DE+ +IF+ ID LF
Sbjct: 32 GAFVPVDLRRPNPNGLEFDNLYLDMNGIIHPCFHPEGRPAPTTYDEVFKSIFDYIDHLFG 91
Query: 96 IVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAE 155
++RPRKLLYMAIDGVAPRAKMNQ RSRRFRA+K+ A+ AE
Sbjct: 92 LIRPRKLLYMAIDGVAPRAKMNQ-------------------QRSRRFRAAKDAADAAAE 132
Query: 156 VARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKG 215
R+R++ A+G L +KEK DSN ITPGT FM LS L YYI RLN+ GW+
Sbjct: 133 EERLRKEFEAEGRTL-AQKEKSEAIDSNVITPGTEFMFVLSTALQYYIQLRLNHTLGWQS 191
Query: 216 IKVILSDANVP 226
+K+ILSD+NVP
Sbjct: 192 VKIILSDSNVP 202
>gi|413921159|gb|AFW61091.1| hypothetical protein ZEAMMB73_651968 [Zea mays]
Length = 1058
Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 114/189 (60%), Positives = 133/189 (70%), Gaps = 20/189 (10%)
Query: 38 KIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIV 97
++P D+SKPNPNG+EFDNLYLDMNGIIHPC HPED+P+P E+ +F+ IDRLF +V
Sbjct: 33 RVPVDTSKPNPNGLEFDNLYLDMNGIIHPCFHPEDRPSPTTFAEVFQCMFDYIDRLFIMV 92
Query: 98 RPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVA 157
RPRKL+YMAIDGVAPRAKMNQ RSRRFRA+K+ A+ AE
Sbjct: 93 RPRKLMYMAIDGVAPRAKMNQ-------------------QRSRRFRAAKDAADAAAEEE 133
Query: 158 RIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIK 217
R+RE+ +G L P K++ DSN ITPGT FMA LS L YYIH RLN DPGWK IK
Sbjct: 134 RLREEFEREGRRL-PAKQQSQTCDSNVITPGTEFMAVLSVALQYYIHQRLNYDPGWKKIK 192
Query: 218 VILSDANVP 226
VILSDANVP
Sbjct: 193 VILSDANVP 201
>gi|293333211|ref|NP_001170327.1| uncharacterized protein LOC100384297 [Zea mays]
gi|224035107|gb|ACN36629.1| unknown [Zea mays]
gi|413932823|gb|AFW67374.1| hypothetical protein ZEAMMB73_239358 [Zea mays]
Length = 490
Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 107/191 (56%), Positives = 129/191 (67%), Gaps = 20/191 (10%)
Query: 36 GQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFR 95
G +P D +PNPNG+EFDNLYLDMNGIIHPC HPE +PAP DE+ +IF+ ID LF
Sbjct: 32 GAFVPVDLRRPNPNGLEFDNLYLDMNGIIHPCFHPEGRPAPTTYDEVFKSIFDYIDHLFG 91
Query: 96 IVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAE 155
++RPRKLLYMAIDGVAPRAKMNQ RSRRFRA+K+ A+ AE
Sbjct: 92 LIRPRKLLYMAIDGVAPRAKMNQ-------------------QRSRRFRAAKDAADAAAE 132
Query: 156 VARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKG 215
R+R++ A+G L +KEK DSN ITPGT FM LS L YYI RLN+ GW+
Sbjct: 133 EERLRKEFEAEGRTL-AQKEKSEAIDSNVITPGTEFMFVLSTALQYYIQLRLNHTLGWQS 191
Query: 216 IKVILSDANVP 226
+K+ILSD+NVP
Sbjct: 192 VKIILSDSNVP 202
>gi|413921160|gb|AFW61092.1| hypothetical protein ZEAMMB73_651968 [Zea mays]
Length = 1079
Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 114/189 (60%), Positives = 133/189 (70%), Gaps = 20/189 (10%)
Query: 38 KIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIV 97
++P D+SKPNPNG+EFDNLYLDMNGIIHPC HPED+P+P E+ +F+ IDRLF +V
Sbjct: 33 RVPVDTSKPNPNGLEFDNLYLDMNGIIHPCFHPEDRPSPTTFAEVFQCMFDYIDRLFIMV 92
Query: 98 RPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVA 157
RPRKL+YMAIDGVAPRAKMNQ RSRRFRA+K+ A+ AE
Sbjct: 93 RPRKLMYMAIDGVAPRAKMNQ-------------------QRSRRFRAAKDAADAAAEEE 133
Query: 158 RIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIK 217
R+RE+ +G L P K++ DSN ITPGT FMA LS L YYIH RLN DPGWK IK
Sbjct: 134 RLREEFEREGRRL-PAKQQSQTCDSNVITPGTEFMAVLSVALQYYIHQRLNYDPGWKKIK 192
Query: 218 VILSDANVP 226
VILSDANVP
Sbjct: 193 VILSDANVP 201
>gi|356576739|ref|XP_003556487.1| PREDICTED: 5'-3' exoribonuclease 4-like [Glycine max]
Length = 931
Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 112/211 (53%), Positives = 137/211 (64%), Gaps = 22/211 (10%)
Query: 18 DSKPYSFASLVSLPQEVNGQKIPF--DSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPA 75
D P S A +V V +PF D+SKPNPNGMEFDNLYLDMNGIIHPC HP+ KPA
Sbjct: 12 DRYPLSIADVVEEDPAVGDDGVPFPIDASKPNPNGMEFDNLYLDMNGIIHPCFHPDGKPA 71
Query: 76 PKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTW 135
P D++ +IF+ +D L+ +VRPRKLLY+AIDGVAPRAKMNQ
Sbjct: 72 PATYDDVFKSIFDYLDHLYTLVRPRKLLYLAIDGVAPRAKMNQ----------------- 114
Query: 136 QLMRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACL 195
RSRRFRA+K+ AE AE R+R++ ++G +L K+K DSN ITPGT FM L
Sbjct: 115 --QRSRRFRAAKDAAEAEAEEERLRKEFQSEGKVL-SSKDKPETSDSNVITPGTQFMVAL 171
Query: 196 SACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
S L YYI RLN++P W+ KVILSD+N P
Sbjct: 172 SVSLQYYIQTRLNHNPSWRNTKVILSDSNAP 202
>gi|357126119|ref|XP_003564736.1| PREDICTED: 5'-3' exoribonuclease 3-like [Brachypodium distachyon]
Length = 1061
Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 114/189 (60%), Positives = 132/189 (69%), Gaps = 20/189 (10%)
Query: 38 KIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIV 97
K+P D+SKPNPN +EFDNLYLDMNGIIHPC HPED+P+P E+ +F+ IDRLF +V
Sbjct: 33 KVPVDTSKPNPNSLEFDNLYLDMNGIIHPCFHPEDRPSPTTFAEVFQCMFDYIDRLFVMV 92
Query: 98 RPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVA 157
RPRKL+YMAIDGVAPRAKMNQ RSRRFRA+K+ A+ AE
Sbjct: 93 RPRKLMYMAIDGVAPRAKMNQ-------------------QRSRRFRAAKDAADAAAEEE 133
Query: 158 RIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIK 217
++RE+ +G LPP K + DSN ITPGT FMA LS L YYIH RLN DPGWK IK
Sbjct: 134 KLREEFEREGRKLPP-KLQSQTCDSNVITPGTEFMAVLSVALQYYIHLRLNYDPGWKQIK 192
Query: 218 VILSDANVP 226
VILSDANVP
Sbjct: 193 VILSDANVP 201
>gi|357441511|ref|XP_003591033.1| 5'-3' exoribonuclease [Medicago truncatula]
gi|355480081|gb|AES61284.1| 5'-3' exoribonuclease [Medicago truncatula]
Length = 1029
Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 106/187 (56%), Positives = 129/187 (68%), Gaps = 20/187 (10%)
Query: 40 PFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRP 99
P D+SKPNPNG+EFDNLYLDMNGIIHPC HP+ KP+P DE+ +F+ +D LF +VRP
Sbjct: 30 PIDASKPNPNGIEFDNLYLDMNGIIHPCFHPDGKPSPATYDEVFKLVFDYVDHLFSLVRP 89
Query: 100 RKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARI 159
RKLLY+A DGVAPRAKMNQ RSRRFRA+K+ AE AE R+
Sbjct: 90 RKLLYLATDGVAPRAKMNQ-------------------QRSRRFRAAKDAAEAEAEEERL 130
Query: 160 REKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVI 219
R++ + +G +L K+K DSN ITPGT FMA LS L YY+ RLN++P WK IKVI
Sbjct: 131 RKEFVEEGALL-SSKDKPETSDSNVITPGTKFMASLSVALQYYVQTRLNHNPAWKNIKVI 189
Query: 220 LSDANVP 226
LSD+NVP
Sbjct: 190 LSDSNVP 196
>gi|242080797|ref|XP_002445167.1| hypothetical protein SORBIDRAFT_07g005160 [Sorghum bicolor]
gi|241941517|gb|EES14662.1| hypothetical protein SORBIDRAFT_07g005160 [Sorghum bicolor]
Length = 945
Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 114/189 (60%), Positives = 133/189 (70%), Gaps = 20/189 (10%)
Query: 38 KIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIV 97
++P D+SKPNPNG+EFDNLYLDMNGIIHPC HPED+P+P E+ +F+ IDRLF +V
Sbjct: 33 RVPVDTSKPNPNGLEFDNLYLDMNGIIHPCFHPEDRPSPTTFAEVFKCMFDYIDRLFIMV 92
Query: 98 RPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVA 157
RPRKL+YMAIDGVAPRAKMNQ RSRRFRA+K+ A+ AE
Sbjct: 93 RPRKLMYMAIDGVAPRAKMNQ-------------------QRSRRFRAAKDAADAAAEEE 133
Query: 158 RIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIK 217
R+RE+ +G L P K++ DSN ITPGT FMA LS L YYIH RLN DPGWK IK
Sbjct: 134 RLREEFEREGRRL-PAKQQSQTCDSNVITPGTEFMAVLSIALQYYIHQRLNYDPGWKKIK 192
Query: 218 VILSDANVP 226
VILSDANVP
Sbjct: 193 VILSDANVP 201
>gi|449531061|ref|XP_004172506.1| PREDICTED: 5'-3' exoribonuclease 4-like, partial [Cucumis sativus]
Length = 254
Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 112/192 (58%), Positives = 128/192 (66%), Gaps = 20/192 (10%)
Query: 35 NGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLF 94
+G P D SKPNPNGMEFDNLYLDMNGIIHPC HPE KP P D + +IF+ ID LF
Sbjct: 31 SGVLFPIDVSKPNPNGMEFDNLYLDMNGIIHPCFHPEGKPPPATYDAVFKSIFDYIDHLF 90
Query: 95 RIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIA 154
+VRPRK+LYMAIDGVAPRAKMNQ RSRRFRA+K+ AE A
Sbjct: 91 SLVRPRKVLYMAIDGVAPRAKMNQ-------------------QRSRRFRAAKDAAEAEA 131
Query: 155 EVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWK 214
E R+R++ A+G L P KEK DSN ITPGT FM LS L YY RLN++PGW+
Sbjct: 132 EEERLRKEFEAEGQTLLP-KEKPETCDSNVITPGTEFMGVLSVALQYYAQSRLNHNPGWR 190
Query: 215 GIKVILSDANVP 226
KVILSD+NVP
Sbjct: 191 FTKVILSDSNVP 202
>gi|22531090|gb|AAM97049.1| unknown protein [Arabidopsis thaliana]
gi|23197934|gb|AAN15494.1| unknown protein [Arabidopsis thaliana]
Length = 763
Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 113/191 (59%), Positives = 133/191 (69%), Gaps = 20/191 (10%)
Query: 36 GQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFR 95
G KIP D+SKPNPN +E+DNLYLDMNGIIHPC HPED+P+P +E+ +F+ IDRLF
Sbjct: 31 GIKIPVDTSKPNPNNLEYDNLYLDMNGIIHPCFHPEDRPSPTTFEEVFQCMFDYIDRLFV 90
Query: 96 IVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAE 155
+VRPRKLLYMAIDGVAPRAKMNQ RSRRFR++K+ ++ AE
Sbjct: 91 MVRPRKLLYMAIDGVAPRAKMNQ-------------------QRSRRFRSAKDASDAAAE 131
Query: 156 VARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKG 215
R+RE+ +G LPP K FDSN ITPGT FM LS L YY+H RLN+D GWK
Sbjct: 132 EERLREEFEREGRRLPP-KVDSQVFDSNVITPGTEFMGVLSIALQYYVHLRLNHDVGWKN 190
Query: 216 IKVILSDANVP 226
IKVILSDANVP
Sbjct: 191 IKVILSDANVP 201
>gi|85078982|ref|XP_956265.1| hypothetical protein NCU01643 [Neurospora crassa OR74A]
gi|74630414|sp|Q8WZX5.3|XRN2_NEUCR RecName: Full=5'-3' exoribonuclease 2
gi|18307456|emb|CAD21516.1| related to dna exoribonuclease Dhp1p [Neurospora crassa]
gi|28917321|gb|EAA27029.1| hypothetical protein NCU01643 [Neurospora crassa OR74A]
Length = 1072
Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 105/196 (53%), Positives = 126/196 (64%), Gaps = 23/196 (11%)
Query: 35 NGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLF 94
+G IP D++KPNPNG EFDNLYLDMNGI+HPC+HPED+PAPKDE+EMMV +F+ DR+
Sbjct: 31 DGTVIPVDATKPNPNGEEFDNLYLDMNGIVHPCSHPEDRPAPKDEEEMMVEVFKYTDRVV 90
Query: 95 RIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIA 154
+VRPRKLL +A+DGVAPRAKMNQ RSRRFRA++E EK
Sbjct: 91 NMVRPRKLLMIAVDGVAPRAKMNQ-------------------QRSRRFRAAREAMEKEE 131
Query: 155 EVARIREKLLADG----CILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
+ + E L P E FDSN ITPGTPFM L+A L Y+ +LN D
Sbjct: 132 DKQKFVELLKKQNGKPQEEEPVEVVVKKAFDSNSITPGTPFMDILAASLRYWCSYKLNTD 191
Query: 211 PGWKGIKVILSDANVP 226
P W IKVI+SDA VP
Sbjct: 192 PAWANIKVIISDATVP 207
>gi|119495190|ref|XP_001264385.1| 5'->3' exoribonculease Dhp1 [Neosartorya fischeri NRRL 181]
gi|119412547|gb|EAW22488.1| 5'->3' exoribonculease Dhp1 [Neosartorya fischeri NRRL 181]
Length = 1057
Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 103/202 (50%), Positives = 134/202 (66%), Gaps = 25/202 (12%)
Query: 30 LPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFEC 89
LP E+NG+++P D++KPNPNG E DNLYLDMNGI+HPCTHPE KP P +E EMMV IF+
Sbjct: 25 LPYEINGEEVPVDTTKPNPNGEEMDNLYLDMNGIVHPCTHPEGKPPPANEQEMMVEIFKY 84
Query: 90 IDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKET 149
DR+ +VRPRKLL +A+DGVAPRAKMNQ R+RRFR+++E
Sbjct: 85 TDRVVNMVRPRKLLMIAVDGVAPRAKMNQ-------------------QRARRFRSAQEA 125
Query: 150 AEKIAEVARIREKLLA--DGCILPPEKEK---GSHFDSNCITPGTPFMACLSACLHYYIH 204
E + R K+LA +G + E ++ +DSN ITPGTPFM L+A L Y+I
Sbjct: 126 KEADEKKEEFR-KMLAKQNGNKVDEELQEEVVKKTWDSNVITPGTPFMDILAASLRYWIA 184
Query: 205 DRLNNDPGWKGIKVILSDANVP 226
+LN DP W+ +K+I+SDA VP
Sbjct: 185 YKLNTDPAWEKLKIIISDATVP 206
>gi|413932825|gb|AFW67376.1| hypothetical protein ZEAMMB73_239358 [Zea mays]
Length = 990
Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 107/191 (56%), Positives = 129/191 (67%), Gaps = 20/191 (10%)
Query: 36 GQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFR 95
G +P D +PNPNG+EFDNLYLDMNGIIHPC HPE +PAP DE+ +IF+ ID LF
Sbjct: 32 GAFVPVDLRRPNPNGLEFDNLYLDMNGIIHPCFHPEGRPAPTTYDEVFKSIFDYIDHLFG 91
Query: 96 IVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAE 155
++RPRKLLYMAIDGVAPRAKMNQ RSRRFRA+K+ A+ AE
Sbjct: 92 LIRPRKLLYMAIDGVAPRAKMNQ-------------------QRSRRFRAAKDAADAAAE 132
Query: 156 VARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKG 215
R+R++ A+G L +KEK DSN ITPGT FM LS L YYI RLN+ GW+
Sbjct: 133 EERLRKEFEAEGRTL-AQKEKSEAIDSNVITPGTEFMFVLSTALQYYIQLRLNHTLGWQS 191
Query: 216 IKVILSDANVP 226
+K+ILSD+NVP
Sbjct: 192 VKIILSDSNVP 202
>gi|403416696|emb|CCM03396.1| predicted protein [Fibroporia radiculosa]
Length = 1140
Score = 201 bits (510), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 99/194 (51%), Positives = 126/194 (64%), Gaps = 19/194 (9%)
Query: 33 EVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDR 92
E N IP D S+PNPN MEFDNLYLDMN I+HPCTHPE KPAP+ E+EMM+ +F+ +R
Sbjct: 40 EGNEVVIPIDISRPNPNDMEFDNLYLDMNNIVHPCTHPEGKPAPETEEEMMLEVFKYTER 99
Query: 93 LFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEK 152
L +VRPR+LL+MA+DGVAPRAKMNQ RSRRFR+S+E +K
Sbjct: 100 LVNMVRPRRLLFMAVDGVAPRAKMNQ-------------------QRSRRFRSSQEAKDK 140
Query: 153 IAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPG 212
A G L E++ +DSN ITPGTPFM L++ L Y++ ++N DPG
Sbjct: 141 EEAHKEAIAMWEAMGKTLSEEEKNKKSWDSNAITPGTPFMDLLASSLRYWVAHKMNTDPG 200
Query: 213 WKGIKVILSDANVP 226
W ++VI+SDANVP
Sbjct: 201 WSQLQVIISDANVP 214
>gi|9369381|gb|AAF87130.1|AC006434_26 F10A5.15 [Arabidopsis thaliana]
Length = 1037
Score = 200 bits (509), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 113/191 (59%), Positives = 133/191 (69%), Gaps = 20/191 (10%)
Query: 36 GQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFR 95
G KIP D+SKPNPN +E+DNLYLDMNGIIHPC HPED+P+P +E+ +F+ IDRLF
Sbjct: 31 GIKIPVDTSKPNPNNLEYDNLYLDMNGIIHPCFHPEDRPSPTTFEEVFQCMFDYIDRLFV 90
Query: 96 IVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAE 155
+VRPRKLLYMAIDGVAPRAKMNQ RSRRFR++K+ ++ AE
Sbjct: 91 MVRPRKLLYMAIDGVAPRAKMNQ-------------------QRSRRFRSAKDASDAAAE 131
Query: 156 VARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKG 215
R+RE+ +G LPP K FDSN ITPGT FM LS L YY+H RLN+D GWK
Sbjct: 132 EERLREEFEREGRRLPP-KVDSQVFDSNVITPGTEFMGVLSIALQYYVHLRLNHDVGWKN 190
Query: 216 IKVILSDANVP 226
IKVILSDANVP
Sbjct: 191 IKVILSDANVP 201
>gi|242037819|ref|XP_002466304.1| hypothetical protein SORBIDRAFT_01g005340 [Sorghum bicolor]
gi|241920158|gb|EER93302.1| hypothetical protein SORBIDRAFT_01g005340 [Sorghum bicolor]
Length = 990
Score = 200 bits (509), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 108/191 (56%), Positives = 128/191 (67%), Gaps = 20/191 (10%)
Query: 36 GQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFR 95
G +P D +PNPNG+EFDNLYLDMNGIIHPC HPE +PAP DE+ +IF ID LF
Sbjct: 32 GAFVPVDLRRPNPNGLEFDNLYLDMNGIIHPCFHPEGRPAPTTYDEVFKSIFYYIDHLFG 91
Query: 96 IVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAE 155
+VRPRKLLYMAIDGVAPRAKMNQ RSRRFRA+K+ A+ AE
Sbjct: 92 LVRPRKLLYMAIDGVAPRAKMNQ-------------------QRSRRFRAAKDAADAAAE 132
Query: 156 VARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKG 215
R+R++ A+G L +KEK DSN ITPGT FM LS L YYI RLN+ GW+
Sbjct: 133 EERLRKEFEAEGRTL-AQKEKSEAIDSNVITPGTQFMFVLSTALQYYIQLRLNHTLGWQS 191
Query: 216 IKVILSDANVP 226
+K+ILSD+NVP
Sbjct: 192 VKIILSDSNVP 202
>gi|452983794|gb|EME83552.1| hypothetical protein MYCFIDRAFT_196796 [Pseudocercospora fijiensis
CIRAD86]
Length = 823
Score = 200 bits (509), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 103/193 (53%), Positives = 128/193 (66%), Gaps = 24/193 (12%)
Query: 38 KIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIV 97
KIP D+ PNPNG E DNLYLDMNGI+HPC+HPED+P P +E+EMMVAIFE +R+ +V
Sbjct: 38 KIPIDARGPNPNGEEMDNLYLDMNGIVHPCSHPEDRPPPANEEEMMVAIFEYTERVVNMV 97
Query: 98 RPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVA 157
RPRKLL +A+DGVAPRAKMNQ RSRRFR+++E AEK A A
Sbjct: 98 RPRKLLMIAVDGVAPRAKMNQ-------------------QRSRRFRSAQEAAEKDAMAA 138
Query: 158 RIREKLLADGCILPPEKEKGSH----FDSNCITPGTPFMACLSACLHYYIHDRLNNDPGW 213
+++A G + EK S +DSN ITPGTPFM L+A L Y+I +L DP W
Sbjct: 139 EFHARMVAAGEA-GGDDEKNSKPKKTWDSNSITPGTPFMDLLAASLRYWISYKLTTDPAW 197
Query: 214 KGIKVILSDANVP 226
+ +KVI+SDA VP
Sbjct: 198 EKLKVIISDATVP 210
>gi|70995976|ref|XP_752743.1| 5'->3' exoribonculease Dhp1 [Aspergillus fumigatus Af293]
gi|74630336|sp|Q8TFZ1.4|XRN2_ASPFU RecName: Full=5'-3' exoribonuclease 2
gi|44889966|emb|CAD29606.2| 5'->3'exoribonuclease, putative [Aspergillus fumigatus]
gi|66850378|gb|EAL90705.1| 5'->3' exoribonculease Dhp1 [Aspergillus fumigatus Af293]
gi|159131498|gb|EDP56611.1| 5'->3' exoribonculease Dhp1 [Aspergillus fumigatus A1163]
Length = 1058
Score = 200 bits (509), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 105/202 (51%), Positives = 133/202 (65%), Gaps = 25/202 (12%)
Query: 30 LPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFEC 89
LP EVNG++IP D +KPNPNG E DNLYLDMNGI+HPCTHPE KP P +E EMMV IF+
Sbjct: 25 LPYEVNGEEIPVDITKPNPNGEEMDNLYLDMNGIVHPCTHPEGKPPPANEQEMMVEIFKY 84
Query: 90 IDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKET 149
DR+ +VRPRKLL +A+DGVAPRAKMNQ R+RRFR+++E
Sbjct: 85 TDRVVNMVRPRKLLMIAVDGVAPRAKMNQ-------------------QRARRFRSAQEA 125
Query: 150 AEKIAEVARIREKLLA--DGCILPPEKEK---GSHFDSNCITPGTPFMACLSACLHYYIH 204
E + R K+LA +G + E ++ +DSN ITPGTPFM L+A L Y+I
Sbjct: 126 KEADEKKEEFR-KMLAKQNGNKVDEELQEEVVKKTWDSNVITPGTPFMDILAASLRYWIA 184
Query: 205 DRLNNDPGWKGIKVILSDANVP 226
+LN DP W+ +K+I+SDA VP
Sbjct: 185 YKLNTDPAWEKLKIIISDATVP 206
>gi|396493104|ref|XP_003843954.1| hypothetical protein LEMA_P016050.1 [Leptosphaeria maculans JN3]
gi|312220534|emb|CBY00475.1| hypothetical protein LEMA_P016050.1 [Leptosphaeria maculans JN3]
Length = 1096
Score = 200 bits (508), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 104/202 (51%), Positives = 128/202 (63%), Gaps = 24/202 (11%)
Query: 30 LPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFEC 89
LP++V + IP D PNPNG EFDNLYLDMNGI+HPC+HPEDK APK E +MM+AIFE
Sbjct: 25 LPKKVGDEIIPVDRCGPNPNGEEFDNLYLDMNGIVHPCSHPEDKAAPKTEADMMMAIFEY 84
Query: 90 IDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKET 149
DR +VRPRKLLYMA+DGVAPRAKMNQ RSRRFR+++E
Sbjct: 85 TDRCVGMVRPRKLLYMAVDGVAPRAKMNQ-------------------QRSRRFRSAREA 125
Query: 150 AEKIAEVARIREKLLADGC-----ILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIH 204
AEK E A ++ L A + E+ +DSN ITPGTPFM L+ L Y+
Sbjct: 126 AEKDVERAEFQKVLTAQKASRGEDVTSLEQVVEKTWDSNAITPGTPFMHLLAESLQYWCA 185
Query: 205 DRLNNDPGWKGIKVILSDANVP 226
+ DP WK +KVI+SD++VP
Sbjct: 186 YKFTTDPSWKDMKVIISDSSVP 207
>gi|430813360|emb|CCJ29283.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 741
Score = 200 bits (508), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 101/196 (51%), Positives = 130/196 (66%), Gaps = 19/196 (9%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
P +V+G I S PNPNG EFDNLYLDMNGI+HPCTHPEDKPAP +EDEMM+ IF+
Sbjct: 3 PIDVDGTLIYPSLSHPNPNGTEFDNLYLDMNGIVHPCTHPEDKPAPTNEDEMMLEIFKYT 62
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
+R+ +VRPRKLL +A+DGVAPRAKMNQ RSRRFRA+++
Sbjct: 63 ERIINMVRPRKLLMIALDGVAPRAKMNQ-------------------QRSRRFRAAQDAE 103
Query: 151 EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
+K +++ + L A G + EK +DSN ITPGTPFM L+ L Y+I ++N+D
Sbjct: 104 KKASDLEEFLKLLKASGKSIDETLEKKKAWDSNVITPGTPFMDALAKSLRYWIIYKINSD 163
Query: 211 PGWKGIKVILSDANVP 226
WK +KVI+SDA+VP
Sbjct: 164 VAWKNLKVIVSDASVP 179
>gi|121701237|ref|XP_001268883.1| 5'->3' exoribonculease Dhp1 [Aspergillus clavatus NRRL 1]
gi|119397026|gb|EAW07457.1| 5'->3' exoribonculease Dhp1 [Aspergillus clavatus NRRL 1]
Length = 1043
Score = 200 bits (508), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 103/202 (50%), Positives = 131/202 (64%), Gaps = 25/202 (12%)
Query: 30 LPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFEC 89
LP EVNG++IP D++KPNPNG E DNLYLDMNGI+HPCTHPE KP P +E EMMV IF+
Sbjct: 25 LPYEVNGEEIPVDTTKPNPNGEEMDNLYLDMNGIVHPCTHPEGKPPPANEQEMMVEIFKY 84
Query: 90 IDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKET 149
DR+ +VRPRK+L +A+DGVAPRAKMNQ R+RRFR+++E
Sbjct: 85 TDRVVNMVRPRKVLMIAVDGVAPRAKMNQ-------------------QRARRFRSAQEA 125
Query: 150 AEKIAEVARIREKLLADGCILPPEKEKGSH-----FDSNCITPGTPFMACLSACLHYYIH 204
E + R K+LA ++E +DSN ITPGTPFM L+A L Y+I
Sbjct: 126 READEKKEEFR-KMLAKQNGNKADQELHEEVIQKTWDSNVITPGTPFMDILAASLRYWIA 184
Query: 205 DRLNNDPGWKGIKVILSDANVP 226
+LN DP W+ +K+I+SDA VP
Sbjct: 185 YKLNTDPAWEKLKIIISDATVP 206
>gi|169763218|ref|XP_001727509.1| 5'-3' exoribonuclease 2 [Aspergillus oryzae RIB40]
gi|238489103|ref|XP_002375789.1| 5'->3' exoribonculease Dhp1 [Aspergillus flavus NRRL3357]
gi|115311954|sp|Q2UCP5.3|XRN2_ASPOR RecName: Full=5'-3' exoribonuclease 2
gi|83770537|dbj|BAE60670.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220698177|gb|EED54517.1| 5'->3' exoribonculease Dhp1 [Aspergillus flavus NRRL3357]
Length = 1035
Score = 199 bits (507), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 100/198 (50%), Positives = 129/198 (65%), Gaps = 21/198 (10%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
P EVNG++IP D+++PNPNG E DNLYLDMNGI+HPCTHPE KP P +E EMM+ IF
Sbjct: 26 PYEVNGEQIPVDTTRPNPNGEELDNLYLDMNGIVHPCTHPEGKPPPANEQEMMLEIFNYT 85
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
DR+ +VRPRKLL +A+DGVAPRAKMNQ R+RRFR+++E
Sbjct: 86 DRVVNMVRPRKLLMIAVDGVAPRAKMNQ-------------------QRARRFRSAQEAK 126
Query: 151 EKIAEVARIREKLL--ADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLN 208
E + R++ L + G E+ +DSN ITPGTPFM L+A L Y+I +LN
Sbjct: 127 EADEKKEEFRKQFLKKSKGDQEIHEEVIQKTWDSNVITPGTPFMDILAASLRYWIAYKLN 186
Query: 209 NDPGWKGIKVILSDANVP 226
DP W+ +K+I+SDA VP
Sbjct: 187 TDPAWEKLKIIISDATVP 204
>gi|169606446|ref|XP_001796643.1| hypothetical protein SNOG_06264 [Phaeosphaeria nodorum SN15]
gi|160706992|gb|EAT86095.2| hypothetical protein SNOG_06264 [Phaeosphaeria nodorum SN15]
Length = 1021
Score = 199 bits (507), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 105/201 (52%), Positives = 128/201 (63%), Gaps = 24/201 (11%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
P++V + IP D + PNPNG EFDNLYLDMNGI+HPC+HPEDKPAPK E +MM+AIFE
Sbjct: 26 PKKVGDEVIPVDRTGPNPNGEEFDNLYLDMNGIVHPCSHPEDKPAPKTEADMMMAIFEYT 85
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
DR+ +VRPRKLLYMA+DGVAPRAKMNQ RSRRFRA++E
Sbjct: 86 DRVVGMVRPRKLLYMAVDGVAPRAKMNQ-------------------QRSRRFRAAREAK 126
Query: 151 EKIAEVARIREKLLADGC-----ILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHD 205
EK E A + L + I E+ +DSN ITPGTPFM L+ L Y+
Sbjct: 127 EKDEERAEFLKMLNSQKASRGEDINSLEEVVEKTWDSNAITPGTPFMHLLAESLQYWCAY 186
Query: 206 RLNNDPGWKGIKVILSDANVP 226
+ DP WK +KVI+SDA+VP
Sbjct: 187 KFTTDPSWKDMKVIISDASVP 207
>gi|391869656|gb|EIT78851.1| 5'-3' exonuclease [Aspergillus oryzae 3.042]
Length = 1035
Score = 199 bits (507), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 100/198 (50%), Positives = 129/198 (65%), Gaps = 21/198 (10%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
P EVNG++IP D+++PNPNG E DNLYLDMNGI+HPCTHPE KP P +E EMM+ IF
Sbjct: 26 PYEVNGEQIPVDTTRPNPNGEELDNLYLDMNGIVHPCTHPEGKPPPANEQEMMLEIFNYT 85
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
DR+ +VRPRKLL +A+DGVAPRAKMNQ R+RRFR+++E
Sbjct: 86 DRVVNMVRPRKLLMIAVDGVAPRAKMNQ-------------------QRARRFRSAQEAK 126
Query: 151 EKIAEVARIREKLL--ADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLN 208
E + R++ L + G E+ +DSN ITPGTPFM L+A L Y+I +LN
Sbjct: 127 EADEKKEEFRKQFLKKSKGDQEIHEEVIQKTWDSNVITPGTPFMDILAASLRYWIAYKLN 186
Query: 209 NDPGWKGIKVILSDANVP 226
DP W+ +K+I+SDA VP
Sbjct: 187 TDPAWEKLKIIISDATVP 204
>gi|18410905|ref|NP_565114.1| 5'-3' exoribonuclease 3 [Arabidopsis thaliana]
gi|75262832|sp|Q9FQ03.1|XRN3_ARATH RecName: Full=5'-3' exoribonuclease 3; AltName: Full=Protein
EXORIBONUCLEASE 3
gi|11875628|gb|AAG40732.1|AF286719_1 XRN3 [Arabidopsis thaliana]
gi|332197621|gb|AEE35742.1| 5'-3' exoribonuclease 3 [Arabidopsis thaliana]
Length = 1020
Score = 199 bits (507), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 113/191 (59%), Positives = 133/191 (69%), Gaps = 20/191 (10%)
Query: 36 GQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFR 95
G KIP D+SKPNPN +E+DNLYLDMNGIIHPC HPED+P+P +E+ +F+ IDRLF
Sbjct: 31 GIKIPVDTSKPNPNNLEYDNLYLDMNGIIHPCFHPEDRPSPTTFEEVFQCMFDYIDRLFV 90
Query: 96 IVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAE 155
+VRPRKLLYMAIDGVAPRAKMNQ RSRRFR++K+ ++ AE
Sbjct: 91 MVRPRKLLYMAIDGVAPRAKMNQ-------------------QRSRRFRSAKDASDAAAE 131
Query: 156 VARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKG 215
R+RE+ +G LPP K FDSN ITPGT FM LS L YY+H RLN+D GWK
Sbjct: 132 EERLREEFEREGRRLPP-KVDSQVFDSNVITPGTEFMGVLSIALQYYVHLRLNHDVGWKN 190
Query: 216 IKVILSDANVP 226
IKVILSDANVP
Sbjct: 191 IKVILSDANVP 201
>gi|239607237|gb|EEQ84224.1| 5'-3' exoribonuclease 2 [Ajellomyces dermatitidis ER-3]
gi|327351196|gb|EGE80053.1| 5'-3' exoribonuclease 2 [Ajellomyces dermatitidis ATCC 18188]
Length = 1031
Score = 199 bits (505), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 101/201 (50%), Positives = 134/201 (66%), Gaps = 23/201 (11%)
Query: 30 LPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFEC 89
+PQE++G+++P D++KPNPNG E DNLYLDMNGI+HPCTHPE KP P+ E++MM+ IF+
Sbjct: 25 IPQEIDGEEVPVDTTKPNPNGEEMDNLYLDMNGIVHPCTHPEGKPPPETEEDMMLEIFKY 84
Query: 90 IDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRA---S 146
DR+ +VRPRKLL +A+DGVAPRAKMNQ RSRRFR+ +
Sbjct: 85 TDRVVNMVRPRKLLMIAVDGVAPRAKMNQ-------------------QRSRRFRSAQEA 125
Query: 147 KETAEKIAEVARIREKLLAD-GCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHD 205
KE EK E A++ K + G E+ +DSN ITPGTPFM L+A L Y++
Sbjct: 126 KEADEKKEEFAKLLRKQNGNKGGEGLVEEVITKTWDSNVITPGTPFMDILAAALRYWVAY 185
Query: 206 RLNNDPGWKGIKVILSDANVP 226
+LN DP W+ +K+I+SDA VP
Sbjct: 186 KLNTDPAWEKLKIIISDATVP 206
>gi|402074937|gb|EJT70408.1| 5'-3' exoribonuclease 2 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 1040
Score = 199 bits (505), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 100/196 (51%), Positives = 128/196 (65%), Gaps = 23/196 (11%)
Query: 35 NGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLF 94
+G IP D++KPNPNG EFDNLYLDMNGI+HPC HPED+PAPKDE+EMM+ IF DR+
Sbjct: 31 DGTVIPVDTAKPNPNGEEFDNLYLDMNGIVHPCAHPEDRPAPKDEEEMMLEIFRYTDRVV 90
Query: 95 RIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIA 154
+VRPRK+L +A+DGVAPRAKMNQ RSRRFR+++E EK
Sbjct: 91 NMVRPRKVLMIAVDGVAPRAKMNQ-------------------QRSRRFRSAQEAKEKAE 131
Query: 155 EVARIREKL-LADGCILPPEKEKG---SHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
+ + + L +G + PE + FD+N ITPGTPFM L+A L Y+ +LN D
Sbjct: 132 DKMELLKLLKQQNGGDVAPETLESVTKKAFDTNSITPGTPFMLILAASLRYWCAYKLNTD 191
Query: 211 PGWKGIKVILSDANVP 226
P W +K+I+SDA VP
Sbjct: 192 PAWANLKIIISDATVP 207
>gi|261200841|ref|XP_002626821.1| 5'-3' exoribonuclease 2 [Ajellomyces dermatitidis SLH14081]
gi|239593893|gb|EEQ76474.1| 5'-3' exoribonuclease 2 [Ajellomyces dermatitidis SLH14081]
Length = 1031
Score = 199 bits (505), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 101/201 (50%), Positives = 134/201 (66%), Gaps = 23/201 (11%)
Query: 30 LPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFEC 89
+PQE++G+++P D++KPNPNG E DNLYLDMNGI+HPCTHPE KP P+ E++MM+ IF+
Sbjct: 25 IPQEIDGEEVPVDTTKPNPNGEEMDNLYLDMNGIVHPCTHPEGKPPPETEEDMMLEIFKY 84
Query: 90 IDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRA---S 146
DR+ +VRPRKLL +A+DGVAPRAKMNQ RSRRFR+ +
Sbjct: 85 TDRVVNMVRPRKLLMIAVDGVAPRAKMNQ-------------------QRSRRFRSAQEA 125
Query: 147 KETAEKIAEVARIREKLLAD-GCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHD 205
KE EK E A++ K + G E+ +DSN ITPGTPFM L+A L Y++
Sbjct: 126 KEADEKKEEFAKLLRKQNGNKGGEGLVEEVITKTWDSNVITPGTPFMDILAAALRYWVAY 185
Query: 206 RLNNDPGWKGIKVILSDANVP 226
+LN DP W+ +K+I+SDA VP
Sbjct: 186 KLNTDPAWEKLKIIISDATVP 206
>gi|212531981|ref|XP_002146147.1| 5'->3' exoribonculease Dhp1 [Talaromyces marneffei ATCC 18224]
gi|210071511|gb|EEA25600.1| 5'->3' exoribonculease Dhp1 [Talaromyces marneffei ATCC 18224]
Length = 1042
Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 106/203 (52%), Positives = 129/203 (63%), Gaps = 26/203 (12%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
P EVNG+ IP D++KPNPNG E DNLYLDMNGI+HPCTHPE KP P +E EMM+ IF
Sbjct: 26 PYEVNGEVIPVDTTKPNPNGEETDNLYLDMNGIVHPCTHPEGKPPPANEQEMMLEIFRYT 85
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
DR+ +VRPRKLL +A+DGVAPRAKMNQ RSRRFR+++E
Sbjct: 86 DRVVNMVRPRKLLMIAVDGVAPRAKMNQ-------------------QRSRRFRSAQEAR 126
Query: 151 E---KIAEVARIREKLLADGCILP----PEKEKGSHFDSNCITPGTPFMACLSACLHYYI 203
E K E ++ K A I P E+ +DSN ITPGTPFM LSA L Y+I
Sbjct: 127 ENDQKKEEFQKLLVKQNAAKGIDPDKDIKEQVIQKTWDSNVITPGTPFMDILSASLRYWI 186
Query: 204 HDRLNNDPGWKGIKVILSDANVP 226
+LN DP W+ +K+I+SDA VP
Sbjct: 187 SYKLNTDPAWEKMKIIISDATVP 209
>gi|145240295|ref|XP_001392794.1| 5'-3' exoribonuclease 2 [Aspergillus niger CBS 513.88]
gi|134077309|emb|CAK45649.1| unnamed protein product [Aspergillus niger]
Length = 1045
Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 99/202 (49%), Positives = 131/202 (64%), Gaps = 25/202 (12%)
Query: 30 LPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFEC 89
PQE+NG+++P D+++PNPNG E DNLYLDMNGI+HPCTHPE KP P +E EMM+ IF+
Sbjct: 25 FPQEINGEEVPVDTTRPNPNGDEMDNLYLDMNGIVHPCTHPEGKPPPANEQEMMLEIFKY 84
Query: 90 IDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKET 149
DR+ +VRPRKLL +A+DGVAPRAKMNQ R+RRFR+++E
Sbjct: 85 TDRVVNMVRPRKLLMIAVDGVAPRAKMNQ-------------------QRARRFRSAQEA 125
Query: 150 AEKIAEVARIREKLLADGCILPPEKEKGSH-----FDSNCITPGTPFMACLSACLHYYIH 204
E + R K+L +++ H +DSN ITPGTPFM L+A L Y+I
Sbjct: 126 READEKKEEFR-KMLEKQNGKKEDEDMQEHVIQKTWDSNVITPGTPFMDILAAALRYWIA 184
Query: 205 DRLNNDPGWKGIKVILSDANVP 226
+LN DP W+ +K+I+SDA VP
Sbjct: 185 YKLNTDPAWEKLKIIISDATVP 206
>gi|302418923|ref|XP_003007292.1| 5'-3' exoribonuclease [Verticillium albo-atrum VaMs.102]
gi|261352943|gb|EEY15371.1| 5'-3' exoribonuclease [Verticillium albo-atrum VaMs.102]
Length = 894
Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 101/199 (50%), Positives = 131/199 (65%), Gaps = 23/199 (11%)
Query: 32 QEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECID 91
Q +G IP +++ PNPNG E DNLYLDMNGI+HPC+HPED+PAPKDE+EMM+ +F+ D
Sbjct: 28 QMEDGTTIPVETTGPNPNGEEQDNLYLDMNGIVHPCSHPEDRPAPKDEEEMMLEVFKYTD 87
Query: 92 RLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAE 151
R+ +VRPRKLL +A+DGVAPRAKMNQ RSRRFR+++E E
Sbjct: 88 RVVNMVRPRKLLMIAVDGVAPRAKMNQ-------------------QRSRRFRSAQEAQE 128
Query: 152 KIAEVARIREKL-LADGCILPPEKEKGSH---FDSNCITPGTPFMACLSACLHYYIHDRL 207
K + + + L +G ILPPE + + FDSN ITPGTPFM L+ L Y+ +L
Sbjct: 129 KEVDKQELLKLLKQQNGGILPPETLESMNKKAFDSNSITPGTPFMDTLATSLRYWCAYKL 188
Query: 208 NNDPGWKGIKVILSDANVP 226
N DP W +K+I+SDA VP
Sbjct: 189 NTDPAWARLKIIISDATVP 207
>gi|452818702|gb|EME25927.1| 5'-3' exoribonuclease [Galdieria sulphuraria]
Length = 645
Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 100/200 (50%), Positives = 125/200 (62%), Gaps = 19/200 (9%)
Query: 27 LVSLPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAI 86
LV + G + D ++PNPNG EFDNLYLDMNGIIHPCTHPE++P P E+EM I
Sbjct: 24 LVGPYDQQQGDFVSIDPTEPNPNGREFDNLYLDMNGIIHPCTHPENRPPPTTEEEMFEEI 83
Query: 87 FECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRAS 146
F IDRL ++RPRKL+Y+A+DGVAPRAK+NQ RSRRFRA+
Sbjct: 84 FRYIDRLVYMIRPRKLVYLAVDGVAPRAKINQ-------------------QRSRRFRAA 124
Query: 147 KETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDR 206
KE EK E+ R+R++ G +P FDSN ITPGTPFM LS L +I DR
Sbjct: 125 KEAEEKQKELLRVRDEWKKKGLRVPEYDPNRKPFDSNVITPGTPFMTNLSVALKQFIADR 184
Query: 207 LNNDPGWKGIKVILSDANVP 226
+ +DP + I VI SD++VP
Sbjct: 185 VAHDPAYNKISVIYSDSSVP 204
>gi|225560323|gb|EEH08605.1| 5'->3' exoribonculease Dhp1 [Ajellomyces capsulatus G186AR]
Length = 1042
Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 100/201 (49%), Positives = 136/201 (67%), Gaps = 23/201 (11%)
Query: 30 LPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFEC 89
+PQE++G+++P D++KPNPNG E DNLYLDMNGI+HPCTHP+ KP P+ E++MM+ IF+
Sbjct: 25 IPQEIDGEEVPVDTTKPNPNGEEMDNLYLDMNGIVHPCTHPDGKPPPETEEDMMLEIFKY 84
Query: 90 IDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRA---S 146
DR+ +VRPRKLL +A+DGVAPRAKMNQ RSRRFR+ +
Sbjct: 85 TDRVVNMVRPRKLLMIAVDGVAPRAKMNQ-------------------QRSRRFRSAQEA 125
Query: 147 KETAEKIAEVAR-IREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHD 205
KE EK E A+ +R++ + G E+ +DSN ITPGTPFM L+A L Y++
Sbjct: 126 KEADEKKEEFAKLLRKQNGSKGGEGLVEEVITKTWDSNVITPGTPFMDILAAALRYWVAY 185
Query: 206 RLNNDPGWKGIKVILSDANVP 226
+LN DP W+ +K+I+SDA VP
Sbjct: 186 KLNTDPAWEKLKIIISDATVP 206
>gi|242774442|ref|XP_002478441.1| 5'->3' exoribonculease Dhp1 [Talaromyces stipitatus ATCC 10500]
gi|218722060|gb|EED21478.1| 5'->3' exoribonculease Dhp1 [Talaromyces stipitatus ATCC 10500]
Length = 1042
Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 105/203 (51%), Positives = 129/203 (63%), Gaps = 26/203 (12%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
P EVNG+ IP D++KPNPNG E DNLYLDMNGI+HPCTHPE KP P +E EMM+ IF
Sbjct: 26 PYEVNGEVIPVDTTKPNPNGEETDNLYLDMNGIVHPCTHPEGKPPPANEQEMMLEIFRYT 85
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
DR+ +VRPRKLL +A+DGVAPRAKMNQ RSRRFR+++E
Sbjct: 86 DRVVNMVRPRKLLMIAVDGVAPRAKMNQ-------------------QRSRRFRSAQEAR 126
Query: 151 E---KIAEVARIREKLLADGCILP----PEKEKGSHFDSNCITPGTPFMACLSACLHYYI 203
E K E ++ + A I P E+ +DSN ITPGTPFM LSA L Y+I
Sbjct: 127 ENDQKKEEFQKLLARQNAAKGIDPDNNLEEQVIKKTWDSNVITPGTPFMDILSASLRYWI 186
Query: 204 HDRLNNDPGWKGIKVILSDANVP 226
+LN DP W+ +K+I+SDA VP
Sbjct: 187 SYKLNTDPAWEKLKIIISDATVP 209
>gi|240278750|gb|EER42256.1| 5'->3' exoribonculease Dhp1 [Ajellomyces capsulatus H143]
gi|325090340|gb|EGC43650.1| 5'-3' exoribonculease Dhp1 [Ajellomyces capsulatus H88]
Length = 1042
Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 100/201 (49%), Positives = 136/201 (67%), Gaps = 23/201 (11%)
Query: 30 LPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFEC 89
+PQE++G+++P D++KPNPNG E DNLYLDMNGI+HPCTHP+ KP P+ E++MM+ IF+
Sbjct: 25 IPQEIDGEEVPVDTTKPNPNGEEMDNLYLDMNGIVHPCTHPDGKPPPETEEDMMLEIFKY 84
Query: 90 IDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRA---S 146
DR+ +VRPRKLL +A+DGVAPRAKMNQ RSRRFR+ +
Sbjct: 85 TDRVVNMVRPRKLLMIAVDGVAPRAKMNQ-------------------QRSRRFRSAQEA 125
Query: 147 KETAEKIAEVAR-IREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHD 205
KE EK E A+ +R++ + G E+ +DSN ITPGTPFM L+A L Y++
Sbjct: 126 KEADEKKEEFAKLLRKQNGSKGGEGLVEEVITKTWDSNVITPGTPFMDILAAALRYWVAY 185
Query: 206 RLNNDPGWKGIKVILSDANVP 226
+LN DP W+ +K+I+SDA VP
Sbjct: 186 KLNTDPAWEKLKIIISDATVP 206
>gi|167521441|ref|XP_001745059.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776673|gb|EDQ90292.1| predicted protein [Monosiga brevicollis MX1]
Length = 235
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 100/186 (53%), Positives = 126/186 (67%), Gaps = 29/186 (15%)
Query: 44 SKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLL 103
++PNP G+EFDNLYLDMNGIIHPC HPED+P+PK E EMM+AIF IDRLFR++RPR+L+
Sbjct: 24 TRPNPLGLEFDNLYLDMNGIIHPCCHPEDRPSPKSEAEMMLAIFTYIDRLFRVIRPRRLV 83
Query: 104 YMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKL 163
+MA+DGVAPRAKMNQ R+RRFRA++E E R+ L
Sbjct: 84 FMAVDGVAPRAKMNQ-------------------QRARRFRAAQEGREA-------RQDL 117
Query: 164 LADGCILPPEKEKGSH---FDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVIL 220
A G L +++ FDSNCITPGT FM+ LSA L +Y+ RL+ DPGW ++VI
Sbjct: 118 QASGDNLSAFRQRRKERMPFDSNCITPGTEFMSRLSAALQHYVVLRLSEDPGWANLQVIF 177
Query: 221 SDANVP 226
SDA+VP
Sbjct: 178 SDASVP 183
>gi|154276492|ref|XP_001539091.1| hypothetical protein HCAG_06696 [Ajellomyces capsulatus NAm1]
gi|150414164|gb|EDN09529.1| hypothetical protein HCAG_06696 [Ajellomyces capsulatus NAm1]
Length = 475
Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 100/202 (49%), Positives = 136/202 (67%), Gaps = 23/202 (11%)
Query: 29 SLPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFE 88
+PQE++G+++P D++KPNPNG E DNLYLDMNGI+HPCTHP+ KP P+ E++MM+ IF+
Sbjct: 24 EIPQEIDGEEVPVDTTKPNPNGEEMDNLYLDMNGIVHPCTHPDGKPPPETEEDMMLEIFK 83
Query: 89 CIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRA--- 145
DR+ +VRPRKLL +A+DGVAPRAKMNQ RSRRFR+
Sbjct: 84 YTDRVVNMVRPRKLLMIAVDGVAPRAKMNQ-------------------QRSRRFRSAQE 124
Query: 146 SKETAEKIAEVAR-IREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIH 204
+KE EK E A+ +R++ + G E+ +DSN ITPGTPFM L+A L Y++
Sbjct: 125 AKEADEKKEEFAKLLRKQNGSKGGEGLVEEVITKTWDSNVITPGTPFMDVLAAALRYWVA 184
Query: 205 DRLNNDPGWKGIKVILSDANVP 226
+LN DP W+ +K+I+SDA VP
Sbjct: 185 YKLNTDPAWENLKIIISDATVP 206
>gi|296813543|ref|XP_002847109.1| 5'-3' exoribonuclease 2 [Arthroderma otae CBS 113480]
gi|238842365|gb|EEQ32027.1| 5'-3' exoribonuclease 2 [Arthroderma otae CBS 113480]
Length = 1027
Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 100/206 (48%), Positives = 135/206 (65%), Gaps = 23/206 (11%)
Query: 25 ASLVSLPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMV 84
A + PQE++GQ+IP D++KPNPNG E DNLYLDMNGI+HPCTHPE KP P +E EMM+
Sbjct: 20 AVVEEQPQEIDGQEIPVDTTKPNPNGEEMDNLYLDMNGIVHPCTHPEGKPPPANEGEMML 79
Query: 85 AIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFR 144
IF+ DR+ +VRPRK+L +A+DGVAPRAKMNQ RSRRFR
Sbjct: 80 EIFKYTDRVVNMVRPRKVLMIAVDGVAPRAKMNQ-------------------QRSRRFR 120
Query: 145 ASKETA---EKIAEVAR-IREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLH 200
++++ EK E AR ++++ + E+ +D+N ITPGTPFM L+ L
Sbjct: 121 SAQDAKAEDEKKVEFARLLKKQKRGKTDVTIAEEVITKTWDTNVITPGTPFMDILALALR 180
Query: 201 YYIHDRLNNDPGWKGIKVILSDANVP 226
Y++ +L+ DPGW+ +KVI+SDA VP
Sbjct: 181 YWVAYKLSTDPGWEKLKVIISDATVP 206
>gi|449673057|ref|XP_002169407.2| PREDICTED: LOW QUALITY PROTEIN: 5'-3' exoribonuclease 2-like [Hydra
magnipapillata]
Length = 999
Score = 197 bits (501), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 107/195 (54%), Positives = 124/195 (63%), Gaps = 29/195 (14%)
Query: 32 QEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECID 91
+E N K+P D+S PNPN EFDNLYLDMNGIIHPC+HPE+KPAPK+E EMM+ IFE ID
Sbjct: 27 KECNDVKVPVDTSLPNPNDYEFDNLYLDMNGIIHPCSHPENKPAPKNETEMMLNIFEYID 86
Query: 92 RLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAE 151
R+F IVRPR+LLYMAIDGVAPRAKMNQ RSRRFRA+K+ E
Sbjct: 87 RIFSIVRPRRLLYMAIDGVAPRAKMNQ-------------------QRSRRFRAAKDARE 127
Query: 152 KIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDP 211
+ E R+ + + + N GT FM L+ CL YYI RL NDP
Sbjct: 128 RERERERLLDDRFY----------XNRYVNKNFFKXGTEFMDRLAVCLRYYIAHRLTNDP 177
Query: 212 GWKGIKVILSDANVP 226
GWK IKVILSDAN P
Sbjct: 178 GWKNIKVILSDANTP 192
>gi|358372009|dbj|GAA88615.1| 5'->3' exoribonculease Dhp1 [Aspergillus kawachii IFO 4308]
Length = 1045
Score = 197 bits (501), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 98/201 (48%), Positives = 128/201 (63%), Gaps = 23/201 (11%)
Query: 30 LPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFEC 89
PQE+NG+++P D+++PNPNG E DNLYLDMNGI+HPCTHPE KP P +E EMM+ IF+
Sbjct: 25 FPQEINGEEVPVDTTRPNPNGDEMDNLYLDMNGIVHPCTHPEGKPPPSNEQEMMLEIFKY 84
Query: 90 IDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKET 149
DR+ +VRPRKLL +A+DGVAPRAKMNQ R+RRFR+++E
Sbjct: 85 TDRVVNMVRPRKLLMIAVDGVAPRAKMNQ-------------------QRARRFRSAQEA 125
Query: 150 AEKIAEVARIREKLLADGCILPPEKEK----GSHFDSNCITPGTPFMACLSACLHYYIHD 205
E + R+ L E + +DSN ITPGTPFM L+A L Y+I
Sbjct: 126 READEKKEEFRKMLERQNGKKEDEDMQEQVIQKTWDSNVITPGTPFMDILAAALRYWIAY 185
Query: 206 RLNNDPGWKGIKVILSDANVP 226
+LN DP W+ +K+I+SDA VP
Sbjct: 186 KLNTDPAWEKLKIIISDATVP 206
>gi|425770113|gb|EKV08587.1| 5'-3' exoribonuclease 2 [Penicillium digitatum Pd1]
gi|425771660|gb|EKV10097.1| 5'-3' exoribonuclease 2 [Penicillium digitatum PHI26]
Length = 1036
Score = 197 bits (501), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 102/200 (51%), Positives = 132/200 (66%), Gaps = 24/200 (12%)
Query: 32 QEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECID 91
Q V+G++IP D ++PNPNG E DNLYLDMNGI+HPCTHPE KP P DE EMM+ I++ D
Sbjct: 27 QVVDGEEIPIDITRPNPNGEEQDNLYLDMNGIVHPCTHPEGKPPPADEQEMMMEIYKYTD 86
Query: 92 RLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAE 151
R+ +VRPRKLL +AIDGVAPRAKMNQ R+RRFRA++E E
Sbjct: 87 RVVNMVRPRKLLMIAIDGVAPRAKMNQ-------------------QRARRFRAAQEAKE 127
Query: 152 ---KIAEVARI--REKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDR 206
K E+ ++ ++ + G L E+ +DSN ITPGTPFM L+A L Y+I +
Sbjct: 128 NDQKKEELQKMLAQQHVAKTGEQLVREEVVQKTWDSNVITPGTPFMDILAASLRYWIAYK 187
Query: 207 LNNDPGWKGIKVILSDANVP 226
LN DPGW+ +K+I+SDA VP
Sbjct: 188 LNTDPGWENLKIIISDATVP 207
>gi|46138403|ref|XP_390892.1| hypothetical protein FG10716.1 [Gibberella zeae PH-1]
gi|115311956|sp|Q4HWE2.3|XRN2_GIBZE RecName: Full=5'-3' exoribonuclease 2
Length = 980
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 96/196 (48%), Positives = 127/196 (64%), Gaps = 23/196 (11%)
Query: 35 NGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLF 94
+G IP D+++PNPNG EFDNLYLDMNGI+HPC+HPED+PAPKDE+EMM+ +F DR+
Sbjct: 31 DGSTIPVDTTRPNPNGEEFDNLYLDMNGIVHPCSHPEDRPAPKDEEEMMMEVFRYTDRVV 90
Query: 95 RIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIA 154
+VRPRK+L +A+DGVAPRAKMNQ RSRRFR+++E EK
Sbjct: 91 NMVRPRKILMIAVDGVAPRAKMNQ-------------------QRSRRFRSAQEAQEKEQ 131
Query: 155 E----VARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
+ + ++++ + E FDSN ITPGTPFM L+ L Y+ +LN D
Sbjct: 132 DKQELIKMLKQQNGGNLSTESLETVTKKAFDSNSITPGTPFMDILALSLRYWCQYKLNTD 191
Query: 211 PGWKGIKVILSDANVP 226
PGW +K+I+SDA VP
Sbjct: 192 PGWAKLKIIISDATVP 207
>gi|255941486|ref|XP_002561512.1| Pc16g12130 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211586135|emb|CAP93883.1| Pc16g12130 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1015
Score = 197 bits (500), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 103/202 (50%), Positives = 131/202 (64%), Gaps = 26/202 (12%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
PQ V+G++IP D ++PNPNG E DNLYLDMNGI+HPCTHPE KP P DE EMM+ I++
Sbjct: 26 PQVVDGEEIPIDITRPNPNGEEQDNLYLDMNGIVHPCTHPEGKPPPADEQEMMMEIYKYT 85
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
DR+ +VRPRKLL +AIDGVAPRAKMNQ R+RRFR+++E
Sbjct: 86 DRVVNMVRPRKLLMIAIDGVAPRAKMNQ-------------------QRARRFRSAQEAK 126
Query: 151 EKIAEVARIREKLLAD------GCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIH 204
E + + K+LA G L E+ +DSN ITPGTPFM L+A L Y+I
Sbjct: 127 ENDQKKEELH-KMLAQQHATKTGEQLIREEVVQKTWDSNVITPGTPFMDILAASLRYWIA 185
Query: 205 DRLNNDPGWKGIKVILSDANVP 226
+LN DPGW+ +K+I+SDA VP
Sbjct: 186 YKLNTDPGWENLKIIISDATVP 207
>gi|388857586|emb|CCF48735.1| related to dna exoribonuclease Dhp1p [Ustilago hordei]
Length = 1245
Score = 197 bits (500), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 99/189 (52%), Positives = 123/189 (65%), Gaps = 20/189 (10%)
Query: 39 IPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVR 98
+P D+S PNPNG EFD LYLDMNGI+HPCTHPE KPAP+ E+EMM+ +F +R+ +VR
Sbjct: 39 LPLDTSTPNPNGEEFDCLYLDMNGIVHPCTHPEGKPAPESEEEMMIEVFAYTERVVNMVR 98
Query: 99 PRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVAR 158
PR+LL MAIDGVAPRAKMNQ RSRRFRA+KE EK E
Sbjct: 99 PRRLLMMAIDGVAPRAKMNQ-------------------QRSRRFRAAKEAREKHQENES 139
Query: 159 IREKLLADGC-ILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIK 217
+ A G I + +DSN ITPGTPFM L+A L Y++ ++N DPGWK ++
Sbjct: 140 ALAEWKAKGLPITDHALQSKKAWDSNAITPGTPFMDLLAASLRYWVAQKINTDPGWKDVQ 199
Query: 218 VILSDANVP 226
VI+SDA+VP
Sbjct: 200 VIISDASVP 208
>gi|429849601|gb|ELA24966.1| GTPase-activator protein for Ras-like GTPase, partial
[Colletotrichum gloeosporioides Nara gc5]
Length = 3409
Score = 196 bits (499), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 98/197 (49%), Positives = 130/197 (65%), Gaps = 25/197 (12%)
Query: 35 NGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLF 94
+G +IP D++ PNPNG E DNLYLDMNGI+HPC+HPED+PAPKDE+EMM+ +F DR+
Sbjct: 31 DGSEIPVDTTGPNPNGEELDNLYLDMNGIVHPCSHPEDRPAPKDEEEMMLEVFRYTDRVV 90
Query: 95 RIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIA 154
+VRPRKLL +A+DGVAPRAKMNQ RSRRFR++++ +K
Sbjct: 91 NMVRPRKLLMIAVDGVAPRAKMNQ-------------------QRSRRFRSAQDAQQKEE 131
Query: 155 EVARIREKLL--ADGCILPPEKEKG---SHFDSNCITPGTPFMACLSACLHYYIHDRLNN 209
+ + KLL +G ++P E + FDSN ITPGTPFM L+A L Y+ +L+
Sbjct: 132 DKEEVM-KLLKQQNGGVIPEETLESMTKKAFDSNSITPGTPFMDILAASLRYWCAYKLST 190
Query: 210 DPGWKGIKVILSDANVP 226
DP W +K+I+SDA VP
Sbjct: 191 DPAWARLKIIISDATVP 207
>gi|357111459|ref|XP_003557530.1| PREDICTED: 5'-3' exoribonuclease 4-like [Brachypodium distachyon]
Length = 992
Score = 196 bits (499), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 105/191 (54%), Positives = 129/191 (67%), Gaps = 20/191 (10%)
Query: 36 GQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFR 95
G +P D +PNPNG+EFDNLYLDMNGIIHPC HPE +P+P D++ +IF+ ID LF
Sbjct: 32 GAFVPVDLRRPNPNGLEFDNLYLDMNGIIHPCFHPEGRPSPTTYDQVFKSIFDYIDHLFC 91
Query: 96 IVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAE 155
+VRPRKL+YMAIDGVAPRAKMNQ RSRRFRA+K+ A+ AE
Sbjct: 92 LVRPRKLVYMAIDGVAPRAKMNQ-------------------QRSRRFRAAKDAADAAAE 132
Query: 156 VARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKG 215
R+R A+G L +K+K DSN ITPGT FM LS+ L YYI RLN+ PGW+
Sbjct: 133 EERLRLDFEAEGRTL-VQKQKSEAIDSNVITPGTQFMFVLSSALQYYIQLRLNHTPGWQS 191
Query: 216 IKVILSDANVP 226
+KV+LSD+NVP
Sbjct: 192 VKVMLSDSNVP 202
>gi|389640341|ref|XP_003717803.1| 5'-3' exoribonuclease 2 [Magnaporthe oryzae 70-15]
gi|351640356|gb|EHA48219.1| 5'-3' exoribonuclease 2 [Magnaporthe oryzae 70-15]
Length = 1020
Score = 196 bits (499), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 99/196 (50%), Positives = 125/196 (63%), Gaps = 23/196 (11%)
Query: 35 NGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLF 94
+G IP D +KPNPNG EFDNLYLDMNGI+HPC HPED+PAP+DE+EMM+ IF+ DR+F
Sbjct: 31 DGTSIPVDITKPNPNGEEFDNLYLDMNGIVHPCAHPEDRPAPQDEEEMMLEIFKYTDRVF 90
Query: 95 RIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIA 154
+VRPRK+L +A+DGVAPRAKMNQ RSRRFR+++E EK
Sbjct: 91 NMVRPRKVLMIAVDGVAPRAKMNQ-------------------QRSRRFRSAQEAKEKAE 131
Query: 155 EVARIREKLL----ADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
+ + + L D E FD+N ITPGTPFM L+ L Y+ +LN D
Sbjct: 132 DKLELLKLLKQQKGGDVSAETLESVTKKAFDTNSITPGTPFMDILAGSLRYWCAYKLNTD 191
Query: 211 PGWKGIKVILSDANVP 226
PGW +K+I+SDA VP
Sbjct: 192 PGWANVKIIISDATVP 207
>gi|326494150|dbj|BAJ85609.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1014
Score = 196 bits (498), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 109/191 (57%), Positives = 130/191 (68%), Gaps = 20/191 (10%)
Query: 36 GQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFR 95
G +P D +PNPNG+EFDNLYLDMNGIIHPC HPE +P+P DE+ +IF+ ID LF
Sbjct: 32 GAFVPVDPRRPNPNGLEFDNLYLDMNGIIHPCFHPEGRPSPTTYDEVFKSIFDYIDHLFC 91
Query: 96 IVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAE 155
+VRPRK+LYMAIDGVAPRAKMNQ RSRRFRA+K+ A+ AE
Sbjct: 92 LVRPRKVLYMAIDGVAPRAKMNQ-------------------QRSRRFRAAKDAADAAAE 132
Query: 156 VARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKG 215
R+R + A+G L KEK DSN ITPGTPFM LS+ L YYI RLN+ PGW+
Sbjct: 133 EERLRLEFEAEGRNL-VRKEKSEAIDSNVITPGTPFMFVLSSALQYYIQLRLNHSPGWQS 191
Query: 216 IKVILSDANVP 226
+KVILSD+NVP
Sbjct: 192 VKVILSDSNVP 202
>gi|440639205|gb|ELR09124.1| hypothetical protein GMDG_03704 [Geomyces destructans 20631-21]
Length = 1005
Score = 196 bits (497), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 100/199 (50%), Positives = 130/199 (65%), Gaps = 23/199 (11%)
Query: 32 QEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECID 91
++V+ IP D+++PNPNG EFDNLYLDMNGI+HPC+HPED+P P +E+EMM+ IF+ +
Sbjct: 27 KDVDNVAIPVDATQPNPNGEEFDNLYLDMNGIVHPCSHPEDRPPPANEEEMMLEIFKYTE 86
Query: 92 RLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAE 151
R+F +VRPRKLL +A+DGVAPRAKMNQ RSRRFR+++E E
Sbjct: 87 RVFNMVRPRKLLMIAVDGVAPRAKMNQ-------------------QRSRRFRSAQEAKE 127
Query: 152 KIAEVARIREKL--LADGCILPPEKEK--GSHFDSNCITPGTPFMACLSACLHYYIHDRL 207
K + A + + L A G + E +DSN ITPGTPFM L+A L Y+ +L
Sbjct: 128 KDEDKAELLKMLRSQAGGQVEESTSEAMVTKTWDSNAITPGTPFMDILAASLRYWTAYKL 187
Query: 208 NNDPGWKGIKVILSDANVP 226
N DP W +KVILSDA VP
Sbjct: 188 NTDPAWAKVKVILSDATVP 206
>gi|115492077|ref|XP_001210666.1| 5'-3' exoribonuclease 2 [Aspergillus terreus NIH2624]
gi|114197526|gb|EAU39226.1| 5'-3' exoribonuclease 2 [Aspergillus terreus NIH2624]
Length = 1022
Score = 196 bits (497), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 100/200 (50%), Positives = 131/200 (65%), Gaps = 23/200 (11%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
P EVNG+++P D+++PNPNG E DNLYLDMNGI+HPCTHPE KP P +E EMM+ IF+
Sbjct: 26 PYEVNGEEVPVDTTRPNPNGEEMDNLYLDMNGIVHPCTHPEGKPPPVNEQEMMLEIFKYT 85
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRA---SK 147
DR+ +VRPRKLL +A+DGVAPRAKMNQ R+RRFR+ +K
Sbjct: 86 DRVVNMVRPRKLLMIAVDGVAPRAKMNQ-------------------QRARRFRSAQEAK 126
Query: 148 ETAEKIAEVARIREKLLADGCILPPEKEK-GSHFDSNCITPGTPFMACLSACLHYYIHDR 206
E EK E +++ K + ++E +DSN ITPGTPFM L+A L Y+I +
Sbjct: 127 EADEKKEEFRKLQAKQNGNKADQDLQEEVIQKTWDSNVITPGTPFMDILAASLRYWIAYK 186
Query: 207 LNNDPGWKGIKVILSDANVP 226
LN DP W+ +K+I+SDA VP
Sbjct: 187 LNTDPAWEKLKIIISDATVP 206
>gi|315040952|ref|XP_003169853.1| 5'-3' exoribonuclease 2 [Arthroderma gypseum CBS 118893]
gi|311345815|gb|EFR05018.1| 5'-3' exoribonuclease 2 [Arthroderma gypseum CBS 118893]
Length = 1038
Score = 195 bits (496), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 98/200 (49%), Positives = 132/200 (66%), Gaps = 23/200 (11%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
PQE++GQ+IP D +KPNPNG E DNLYLDMNGI+HPCTHPE KP P +E EMM+ IF+
Sbjct: 26 PQEIDGQEIPVDITKPNPNGEEMDNLYLDMNGIVHPCTHPEGKPPPANEGEMMLEIFKYT 85
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
DR+ +VRPRKLL +A+DGVAPRAKMNQ RSRRFR++++
Sbjct: 86 DRVVNMVRPRKLLMIAVDGVAPRAKMNQ-------------------QRSRRFRSAQDAK 126
Query: 151 ---EKIAEVAR-IREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDR 206
EK E A+ ++++ + E+ +D+N ITPGTPFM L+ L Y++ +
Sbjct: 127 AEDEKKVEFAKLLKKQKRGKSDVTIAEEVIKKTWDTNVITPGTPFMDILALALRYWVAYK 186
Query: 207 LNNDPGWKGIKVILSDANVP 226
L+ DPGW+ +K+I+SDA VP
Sbjct: 187 LSTDPGWEKLKIIISDATVP 206
>gi|294953215|ref|XP_002787652.1| 5'-3' exoribonuclease, putative [Perkinsus marinus ATCC 50983]
gi|239902676|gb|EER19448.1| 5'-3' exoribonuclease, putative [Perkinsus marinus ATCC 50983]
Length = 982
Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 98/195 (50%), Positives = 128/195 (65%), Gaps = 23/195 (11%)
Query: 34 VNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRL 93
N +P D +PNPNG+EFDNLYLD+NGIIHPC HPED P++ED M + I +DRL
Sbjct: 37 ANTYDVPVDFEEPNPNGIEFDNLYLDLNGIIHPCCHPEDGMTPENEDVMFLNIMRYVDRL 96
Query: 94 FRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKI 153
RIVRPRKLLY+AIDGVAPRAKMNQ R+RRF+A++E E++
Sbjct: 97 VRIVRPRKLLYVAIDGVAPRAKMNQ-------------------QRARRFKAAQEATEQM 137
Query: 154 AEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGW 213
E ++R +++ +G P +KG +DSN ITPGTPF+ ++ LH+YI DR+ NDP W
Sbjct: 138 KEEEKLRRQMVKEG--REPPSKKGVPWDSNVITPGTPFLDKVAHMLHWYISDRMTNDPLW 195
Query: 214 K--GIKVILSDANVP 226
+ G + ILSDA P
Sbjct: 196 QLLGFRCILSDAGSP 210
>gi|367035618|ref|XP_003667091.1| hypothetical protein MYCTH_109078 [Myceliophthora thermophila ATCC
42464]
gi|347014364|gb|AEO61846.1| hypothetical protein MYCTH_109078 [Myceliophthora thermophila ATCC
42464]
Length = 561
Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 97/197 (49%), Positives = 128/197 (64%), Gaps = 24/197 (12%)
Query: 35 NGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLF 94
+G +P D+++PNPNG EFDNLYLDMNGI+HPC+HPEDKPAP+DE+EMM+ +F+ DR+
Sbjct: 31 DGTVVPVDTTQPNPNGEEFDNLYLDMNGIVHPCSHPEDKPAPRDEEEMMIEVFKYTDRVV 90
Query: 95 RIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIA 154
+VRPRK+L +A+DGVAPRAKMNQ RSRRFRA+++ EK
Sbjct: 91 NMVRPRKVLMIAVDGVAPRAKMNQ-------------------QRSRRFRAAQDAKEKEE 131
Query: 155 EVARIREKLLADGCILPPEKEK-----GSHFDSNCITPGTPFMACLSACLHYYIHDRLNN 209
++ + L + ++E FDSN ITPGTPFM L+A L Y+ +LN
Sbjct: 132 GKQQLLKMLKKENGSDATKEESVEAVVKKAFDSNSITPGTPFMDILAASLRYWCAYKLNT 191
Query: 210 DPGWKGIKVILSDANVP 226
DP W +KVI+SDA VP
Sbjct: 192 DPAWAKLKVIISDATVP 208
>gi|408399376|gb|EKJ78479.1| hypothetical protein FPSE_01288 [Fusarium pseudograminearum CS3096]
Length = 980
Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 95/196 (48%), Positives = 126/196 (64%), Gaps = 23/196 (11%)
Query: 35 NGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLF 94
+G IP D+++PNPNG EFDNLYLDMNGI+HPC+HPED+PAP DE+EMM+ +F DR+
Sbjct: 31 DGSTIPVDTTRPNPNGEEFDNLYLDMNGIVHPCSHPEDRPAPTDEEEMMMEVFRYTDRVV 90
Query: 95 RIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIA 154
+VRPRK+L +A+DGVAPRAKMNQ RSRRFR+++E EK
Sbjct: 91 NMVRPRKILMIAVDGVAPRAKMNQ-------------------QRSRRFRSAQEAQEKEQ 131
Query: 155 E----VARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
+ + ++++ + E FDSN ITPGTPFM L+ L Y+ +LN D
Sbjct: 132 DKQELIKMLKQQNGGNLSTESLETVTKKAFDSNSITPGTPFMDILALSLRYWCQYKLNTD 191
Query: 211 PGWKGIKVILSDANVP 226
PGW +K+I+SDA VP
Sbjct: 192 PGWAKLKIIISDATVP 207
>gi|380484893|emb|CCF39710.1| XRN 5'-3' exonuclease [Colletotrichum higginsianum]
Length = 1015
Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 98/196 (50%), Positives = 128/196 (65%), Gaps = 23/196 (11%)
Query: 35 NGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLF 94
+G +IP D++ PNPNG E DNLYLDMNGI+HPC+HPED+PAPKDE+EMM+ +F+ DR+
Sbjct: 31 DGSEIPVDTTGPNPNGEELDNLYLDMNGIVHPCSHPEDRPAPKDEEEMMLEVFKYTDRVV 90
Query: 95 RIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIA 154
+VRPRKLL +A+DGVAPRAKMNQ RSRRFR+++E EK
Sbjct: 91 NMVRPRKLLMIAVDGVAPRAKMNQ-------------------QRSRRFRSAQEAQEKEE 131
Query: 155 EVARIREKL-LADGCILPP---EKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
+ + + L +G ++ E FDSN ITPGTPFM L+A L Y+ +LN D
Sbjct: 132 DKQELLKLLKQQNGGVVSDDSLESVTKKAFDSNSITPGTPFMDILAASLRYWCAYKLNTD 191
Query: 211 PGWKGIKVILSDANVP 226
P W +K+I+SDA VP
Sbjct: 192 PAWAKLKIIISDATVP 207
>gi|302663765|ref|XP_003023520.1| hypothetical protein TRV_02267 [Trichophyton verrucosum HKI 0517]
gi|291187523|gb|EFE42902.1| hypothetical protein TRV_02267 [Trichophyton verrucosum HKI 0517]
Length = 1037
Score = 194 bits (494), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 98/200 (49%), Positives = 132/200 (66%), Gaps = 23/200 (11%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
PQE++GQ+IP D +KPNPNG E DNLYLDMNGI+HPCTHPE KP P +E EMM+ IF+
Sbjct: 26 PQEIDGQEIPVDITKPNPNGEEMDNLYLDMNGIVHPCTHPEGKPPPANEGEMMLEIFKYT 85
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
DR+ +VRPRK+L +A+DGVAPRAKMNQ RSRRFR++++
Sbjct: 86 DRVVNMVRPRKVLMIAVDGVAPRAKMNQ-------------------QRSRRFRSAQDAK 126
Query: 151 ---EKIAEVAR-IREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDR 206
EK E A+ ++++ + E+ +D+N ITPGTPFM L+ L Y++ +
Sbjct: 127 AEDEKKVEFAKLLKKQKRGKKDVTITEEVITKTWDTNVITPGTPFMDILALALRYWVAYK 186
Query: 207 LNNDPGWKGIKVILSDANVP 226
L+ DPGW+ +KVI+SDA VP
Sbjct: 187 LSTDPGWEKLKVIISDATVP 206
>gi|326479818|gb|EGE03828.1| hypothetical protein TEQG_02862 [Trichophyton equinum CBS 127.97]
Length = 1035
Score = 194 bits (494), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 98/200 (49%), Positives = 132/200 (66%), Gaps = 23/200 (11%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
PQE++GQ+IP D +KPNPNG E DNLYLDMNGI+HPCTHPE KP P +E EMM+ IF+
Sbjct: 26 PQEIDGQEIPVDITKPNPNGEEMDNLYLDMNGIVHPCTHPEGKPPPANEGEMMLEIFKYT 85
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
DR+ +VRPRK+L +A+DGVAPRAKMNQ RSRRFR++++
Sbjct: 86 DRVVNMVRPRKVLMIAVDGVAPRAKMNQ-------------------QRSRRFRSAQDAK 126
Query: 151 ---EKIAEVAR-IREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDR 206
EK E A+ ++++ + E+ +D+N ITPGTPFM L+ L Y++ +
Sbjct: 127 AEDEKKVEFAKLLKKQKRGKKDVTVAEEVITKTWDTNVITPGTPFMDILALALRYWVAYK 186
Query: 207 LNNDPGWKGIKVILSDANVP 226
L+ DPGW+ +KVI+SDA VP
Sbjct: 187 LSTDPGWEKLKVIISDATVP 206
>gi|336386148|gb|EGO27294.1| hypothetical protein SERLADRAFT_381861 [Serpula lacrymans var.
lacrymans S7.9]
Length = 318
Score = 194 bits (494), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 94/189 (49%), Positives = 126/189 (66%), Gaps = 19/189 (10%)
Query: 38 KIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIV 97
K+P + + PNPNG EFDNLYLDMNGI+HPCTHP++KPAP+ E+EMMV IF +R+ +V
Sbjct: 38 KVPVNMATPNPNGTEFDNLYLDMNGIVHPCTHPDNKPAPETEEEMMVDIFSYTERVVNMV 97
Query: 98 RPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVA 157
RPRK+L+MAIDGVAPRAKMNQ RSRRFR+++E +K
Sbjct: 98 RPRKVLFMAIDGVAPRAKMNQ-------------------QRSRRFRSAQEAKDKEEARR 138
Query: 158 RIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIK 217
+ A G + +++ +DSN ITPGTPFM L+ L Y++ ++N DPGWK ++
Sbjct: 139 EAVAEWEAMGKTISDDEKNKVAWDSNAITPGTPFMDLLALSLRYWVVQKMNTDPGWKDLQ 198
Query: 218 VILSDANVP 226
VI+SDA+VP
Sbjct: 199 VIISDASVP 207
>gi|327302674|ref|XP_003236029.1| 5'-3' exoribonuclease [Trichophyton rubrum CBS 118892]
gi|326461371|gb|EGD86824.1| 5'-3' exoribonuclease [Trichophyton rubrum CBS 118892]
Length = 1034
Score = 194 bits (494), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 98/200 (49%), Positives = 132/200 (66%), Gaps = 23/200 (11%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
PQE++GQ+IP D +KPNPNG E DNLYLDMNGI+HPCTHPE KP P +E EMM+ IF+
Sbjct: 26 PQEIDGQEIPVDITKPNPNGEEMDNLYLDMNGIVHPCTHPEGKPPPANEGEMMLEIFKYT 85
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
DR+ +VRPRK+L +A+DGVAPRAKMNQ RSRRFR++++
Sbjct: 86 DRVVNMVRPRKVLMIAVDGVAPRAKMNQ-------------------QRSRRFRSAQDAK 126
Query: 151 ---EKIAEVAR-IREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDR 206
EK E A+ ++++ + E+ +D+N ITPGTPFM L+ L Y++ +
Sbjct: 127 AEDEKKVEFAKLLKKQKRGKKDVTVAEEVITKTWDTNVITPGTPFMDILALALRYWVAYK 186
Query: 207 LNNDPGWKGIKVILSDANVP 226
L+ DPGW+ +KVI+SDA VP
Sbjct: 187 LSTDPGWEKLKVIISDATVP 206
>gi|302509948|ref|XP_003016934.1| hypothetical protein ARB_05228 [Arthroderma benhamiae CBS 112371]
gi|291180504|gb|EFE36289.1| hypothetical protein ARB_05228 [Arthroderma benhamiae CBS 112371]
Length = 1038
Score = 194 bits (494), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 98/200 (49%), Positives = 132/200 (66%), Gaps = 23/200 (11%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
PQE++GQ+IP D +KPNPNG E DNLYLDMNGI+HPCTHPE KP P +E EMM+ IF+
Sbjct: 26 PQEIDGQEIPVDITKPNPNGEEMDNLYLDMNGIVHPCTHPEGKPPPANEGEMMLEIFKYT 85
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
DR+ +VRPRK+L +A+DGVAPRAKMNQ RSRRFR++++
Sbjct: 86 DRVVNMVRPRKVLMIAVDGVAPRAKMNQ-------------------QRSRRFRSAQDAK 126
Query: 151 ---EKIAEVAR-IREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDR 206
EK E A+ ++++ + E+ +D+N ITPGTPFM L+ L Y++ +
Sbjct: 127 AEDEKKVEFAKLLKKQKRGKKDVTITEEVITKTWDTNVITPGTPFMDILALALRYWVAYK 186
Query: 207 LNNDPGWKGIKVILSDANVP 226
L+ DPGW+ +KVI+SDA VP
Sbjct: 187 LSTDPGWEKLKVIISDATVP 206
>gi|356505926|ref|XP_003521740.1| PREDICTED: 5'-3' exoribonuclease 4-like [Glycine max]
Length = 960
Score = 193 bits (491), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 112/214 (52%), Positives = 133/214 (62%), Gaps = 27/214 (12%)
Query: 18 DSKPYSFASLVSLPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPK 77
D P S A +V V + D SKPNPNGMEFDNLYLDMNGIIHPC HP+ K AP
Sbjct: 12 DRYPLSIADVVEEEPSVGSGAV--DVSKPNPNGMEFDNLYLDMNGIIHPCFHPDGKSAPT 69
Query: 78 DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQL 137
+++ +IF+ ID +F +VRPRKLLY+AIDGVAPRAKMNQ
Sbjct: 70 TYEDVFKSIFDYIDHIFSLVRPRKLLYLAIDGVAPRAKMNQ------------------- 110
Query: 138 MRSRRFR-----ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFM 192
RSRRFR A K+ AE AE+ R+RE+ + +L K K +DSN ITPGTPFM
Sbjct: 111 QRSRRFRAAKDAAEKDAAEAEAEIERLREEFEGEMKLL-SSKVKPETYDSNVITPGTPFM 169
Query: 193 ACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LS L YYI RLN +PGW+ KVILSD+NVP
Sbjct: 170 GVLSVALQYYIQTRLNYNPGWRNTKVILSDSNVP 203
>gi|295660622|ref|XP_002790867.1| 5'-3' exoribonuclease [Paracoccidioides sp. 'lutzii' Pb01]
gi|226281119|gb|EEH36685.1| 5'-3' exoribonuclease [Paracoccidioides sp. 'lutzii' Pb01]
Length = 1053
Score = 193 bits (490), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 107/232 (46%), Positives = 140/232 (60%), Gaps = 45/232 (19%)
Query: 21 PYSFASLVS-LPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDE 79
P +S+V LPQE++GQ++P D++KPNPNG E DNLYLDMNGI+HPCTHPE KP P +E
Sbjct: 15 PKIISSVVEELPQEIDGQEVPVDTTKPNPNGEEMDNLYLDMNGIVHPCTHPEGKPPPSNE 74
Query: 80 DEMMVAIFECIDRLFRIVRPRKLLYMAID---------------------GVAPRAKMNQ 118
+EMM+ IF+ DR+ +VRPRKLL +A+D GVAPRAKMNQ
Sbjct: 75 EEMMLEIFKYTDRVVNMVRPRKLLMIAVDVSLRTITLLSHYDDSVISEGNGVAPRAKMNQ 134
Query: 119 PLTVYSVLYDRGNYSTWQLMRSRRFRA---SKETAEKIAEVAR-IREKLLADGCILPPEK 174
RSRRFR+ +KE EK E A+ +R++ C E+
Sbjct: 135 -------------------QRSRRFRSAQEAKEADEKKVEFAKLLRKQNGKKSCEEIVEE 175
Query: 175 EKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
+DSN ITPGTPFM L+A L Y++ +LN DP W+ +K+I+SDA VP
Sbjct: 176 VIVKTWDSNVITPGTPFMDILAAALRYWVAYKLNTDPAWEKLKIIISDATVP 227
>gi|400592939|gb|EJP60965.1| XRN 5'-3' exonuclease [Beauveria bassiana ARSEF 2860]
Length = 968
Score = 193 bits (490), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 99/196 (50%), Positives = 127/196 (64%), Gaps = 23/196 (11%)
Query: 35 NGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLF 94
+G +IP D ++ NPNG E DNLYLDMNGI+HPC HPEDKPAPKDE+EMM+ IF+ DR+
Sbjct: 31 DGTEIPVDITRANPNGEELDNLYLDMNGIVHPCAHPEDKPAPKDEEEMMLEIFKYTDRVV 90
Query: 95 RIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIA 154
+VRPRK+L +A+DGVAPRAKMNQ RSRRFR+++E EK
Sbjct: 91 NMVRPRKILMIAVDGVAPRAKMNQ-------------------QRSRRFRSAQEAKEKEN 131
Query: 155 EVARIREKL-LADGCILPPEKEKG---SHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
+ + + L +G L E + FD+N ITPGTPFM L++ L Y+ +LN D
Sbjct: 132 DKQELIKLLKQQNGGSLTAESTESVTKKAFDNNSITPGTPFMDILASSLRYWCQYKLNTD 191
Query: 211 PGWKGIKVILSDANVP 226
PGW +KVI+SDA VP
Sbjct: 192 PGWAKLKVIISDATVP 207
>gi|340992664|gb|EGS23219.1| hypothetical protein CTHT_0008830 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 1066
Score = 193 bits (490), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 106/205 (51%), Positives = 133/205 (64%), Gaps = 41/205 (20%)
Query: 35 NGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLF 94
+G +IP D+++PNPNG EFDNLYLDMNGI+HPC+HPEDKPAPKDE+EMM+ IF+ DR+
Sbjct: 31 DGTEIPVDATRPNPNGEEFDNLYLDMNGIVHPCSHPEDKPAPKDEEEMMIEIFKYTDRIV 90
Query: 95 RIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIA 154
++VRPRK+L +A+DGVAPRAKMNQ RSRRFRA++E EK
Sbjct: 91 KMVRPRKILMIAVDGVAPRAKMNQ-------------------QRSRRFRAAQEAKEKEE 131
Query: 155 EVARIREKLLADGCILPPEKEKGSH-------------FDSNCITPGTPFMACLSACLHY 201
E ++ + L KEKGS+ FDSN ITPGTPFM L+A L Y
Sbjct: 132 EKKQLLKML---------RKEKGSNMQEEPLETVVKKAFDSNSITPGTPFMDILAASLRY 182
Query: 202 YIHDRLNNDPGWKGIKVILSDANVP 226
+ +LN DP W +KVI+SDA VP
Sbjct: 183 WCAYKLNTDPAWAKLKVIISDATVP 207
>gi|294899194|ref|XP_002776531.1| 5'-3' exoribonuclease, putative [Perkinsus marinus ATCC 50983]
gi|239883563|gb|EER08347.1| 5'-3' exoribonuclease, putative [Perkinsus marinus ATCC 50983]
Length = 421
Score = 193 bits (490), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 98/194 (50%), Positives = 128/194 (65%), Gaps = 23/194 (11%)
Query: 35 NGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLF 94
N +P D +PNPNG+EFDNLYLD+NGIIHPC HPED P++ED M + I +DRL
Sbjct: 38 NTYDVPVDFEEPNPNGIEFDNLYLDLNGIIHPCCHPEDGMTPENEDVMFLNIMRYVDRLV 97
Query: 95 RIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIA 154
RIVRPRKLLY+AIDGVAPRAKMNQ R+RRF+A++E E++
Sbjct: 98 RIVRPRKLLYVAIDGVAPRAKMNQ-------------------QRARRFKAAQEATEQMK 138
Query: 155 EVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWK 214
E ++R +++ +G P +KG +DSN ITPGTPF+ ++ LH+YI DR+ NDP W+
Sbjct: 139 EEEKLRRQMVKEG--REPPSKKGVPWDSNVITPGTPFLDKVAHMLHWYISDRMTNDPLWQ 196
Query: 215 --GIKVILSDANVP 226
G + ILSDA P
Sbjct: 197 LLGFRCILSDAGSP 210
>gi|310796685|gb|EFQ32146.1| XRN 5'-3' exonuclease [Glomerella graminicola M1.001]
Length = 1020
Score = 192 bits (489), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 99/196 (50%), Positives = 126/196 (64%), Gaps = 23/196 (11%)
Query: 35 NGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLF 94
+G +IP D+ PNPNG E DNLYLDMNGI+HPC+HPED+PAPKDE+EMM+ +F+ DR+
Sbjct: 31 DGSEIPVDTMGPNPNGEELDNLYLDMNGIVHPCSHPEDRPAPKDEEEMMLEVFKYTDRVV 90
Query: 95 RIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIA 154
+VRPRKLL +A+DGVAPRAKMNQ RSRRFR+++E EK
Sbjct: 91 NMVRPRKLLMIAVDGVAPRAKMNQ-------------------QRSRRFRSAQEAQEKEE 131
Query: 155 EVARIREKL-LADGCILPP---EKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
+ + + L G I+ E FDSN ITPGTPFM L+A L Y+ +LN D
Sbjct: 132 DKQELLKLLKQQSGGIVSNDSLESVTKKAFDSNSITPGTPFMDILAASLRYWCAYKLNTD 191
Query: 211 PGWKGIKVILSDANVP 226
P W +K+I+SDA VP
Sbjct: 192 PAWARLKIIISDATVP 207
>gi|302309530|ref|NP_986969.2| AGR303Wp [Ashbya gossypii ATCC 10895]
gi|442570294|sp|Q74ZA0.4|XRN2_ASHGO RecName: Full=5'-3' exoribonuclease 2
gi|299788402|gb|AAS54793.2| AGR303Wp [Ashbya gossypii ATCC 10895]
gi|374110220|gb|AEY99125.1| FAGR303Wp [Ashbya gossypii FDAG1]
Length = 945
Score = 192 bits (489), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 96/196 (48%), Positives = 128/196 (65%), Gaps = 20/196 (10%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
PQ V+G K+P D S NPNG E DNLYLDMNGI+HPC+HPE+KPAP+ EDEM++A+FE
Sbjct: 26 PQVVDGVKLPIDYSAANPNG-ELDNLYLDMNGIVHPCSHPENKPAPETEDEMLLAVFEYT 84
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
+R+ + RPRK+L +A+DGVAPRAKMNQ RSRRFR++++
Sbjct: 85 NRVLNMARPRKVLMIAVDGVAPRAKMNQ-------------------QRSRRFRSARDAK 125
Query: 151 EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
E AR+ + A G ++ + +D+N ITPGTPFM L+A L Y+ +L D
Sbjct: 126 LANEEKARVLAEREAYGEMIDDAVKAKKSWDTNAITPGTPFMDKLAAALRYWTSFKLATD 185
Query: 211 PGWKGIKVILSDANVP 226
PGWK ++VI+SDA VP
Sbjct: 186 PGWKNLQVIISDATVP 201
>gi|363753664|ref|XP_003647048.1| hypothetical protein Ecym_5486 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890684|gb|AET40231.1| hypothetical protein Ecym_5486 [Eremothecium cymbalariae
DBVPG#7215]
Length = 1002
Score = 192 bits (488), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 96/200 (48%), Positives = 130/200 (65%), Gaps = 20/200 (10%)
Query: 27 LVSLPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAI 86
L PQ V+G K+P D S PNPNG E DNLYLDMNGI+HPC+HPE+KPAP+ ED+M++ +
Sbjct: 22 LEETPQIVDGVKLPIDYSSPNPNG-ELDNLYLDMNGIVHPCSHPENKPAPETEDQMLLEV 80
Query: 87 FECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRAS 146
FE +R+ + RPR++L +A+DGVAPRAKMNQ RSRRFR++
Sbjct: 81 FEYTNRVLNMARPRRVLMIAVDGVAPRAKMNQ-------------------QRSRRFRSA 121
Query: 147 KETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDR 206
++ E AR+ + A G ++ + + +DSN ITPGTPFM L+A L Y+ +
Sbjct: 122 RDAKFANEEKARVLAEREAYGELIDDSVKAKTTWDSNAITPGTPFMDKLAAALRYWTSFK 181
Query: 207 LNNDPGWKGIKVILSDANVP 226
L DPGWK ++VI+SDA VP
Sbjct: 182 LATDPGWKHLQVIISDATVP 201
>gi|356573066|ref|XP_003554686.1| PREDICTED: 5'-3' exoribonuclease 4-like [Glycine max]
Length = 957
Score = 192 bits (487), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 106/190 (55%), Positives = 126/190 (66%), Gaps = 25/190 (13%)
Query: 42 DSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRK 101
D SKPNP+GMEFDNLYLDMNGIIHPC HP+ KPAP +++ +IF+ ID +F +VRPRK
Sbjct: 32 DVSKPNPSGMEFDNLYLDMNGIIHPCFHPDGKPAPATYEDVFKSIFDYIDHIFSLVRPRK 91
Query: 102 LLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFR-----ASKETAEKIAEV 156
LLY+AIDGVAPRAKMNQ RSRRFR A K+ AE AE+
Sbjct: 92 LLYLAIDGVAPRAKMNQ-------------------QRSRRFRAAKDAAEKDAAEAEAEI 132
Query: 157 ARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGI 216
R+RE+ + +L K+K +DSN ITPGTPFM LS L YYI RLN +PGW
Sbjct: 133 ERLREEFEGEMKLL-SSKDKPETYDSNVITPGTPFMGVLSVALQYYIQTRLNYNPGWWNT 191
Query: 217 KVILSDANVP 226
KVILSD+NVP
Sbjct: 192 KVILSDSNVP 201
>gi|116204849|ref|XP_001228235.1| hypothetical protein CHGG_10308 [Chaetomium globosum CBS 148.51]
gi|115311955|sp|Q2GNZ6.3|XRN2_CHAGB RecName: Full=5'-3' exoribonuclease 2
gi|88176436|gb|EAQ83904.1| hypothetical protein CHGG_10308 [Chaetomium globosum CBS 148.51]
Length = 1039
Score = 192 bits (487), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 101/206 (49%), Positives = 130/206 (63%), Gaps = 42/206 (20%)
Query: 35 NGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLF 94
+G +P D+++PNPNG EFDNLYLDMNGI+HPC+HPED+PAP DE+EMMV +F+ +R+
Sbjct: 31 DGTVVPVDATQPNPNGEEFDNLYLDMNGIVHPCSHPEDRPAPSDEEEMMVEVFKYTERVV 90
Query: 95 RIVRPRKLLYMAI-DGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKI 153
+VRPRKLL +A+ DGVAPRAKMNQ RSRRFRA+++ EK
Sbjct: 91 NMVRPRKLLMIAVADGVAPRAKMNQ-------------------QRSRRFRAAQDAKEKE 131
Query: 154 AEVARIREKLLADGCILPPEKEKGS-------------HFDSNCITPGTPFMACLSACLH 200
+ ++ + L +KEKGS FDSN ITPGTPFM L+A L
Sbjct: 132 EDKQQLLKML---------QKEKGSTAKEEPIETVVKKAFDSNSITPGTPFMDILAASLR 182
Query: 201 YYIHDRLNNDPGWKGIKVILSDANVP 226
Y+ +LN DP W +KVI+SDA VP
Sbjct: 183 YWCAYKLNTDPAWAKMKVIISDATVP 208
>gi|298713655|emb|CBJ33698.1| putative 5\'-3\' exoribonuclease (XRN3) [Ectocarpus siliculosus]
Length = 708
Score = 192 bits (487), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 100/193 (51%), Positives = 125/193 (64%), Gaps = 21/193 (10%)
Query: 34 VNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRL 93
V G +IP D + NPNG+EFDNLY+DMNGIIHPC+HPEDKP P+ E+EM I + IDRL
Sbjct: 29 VEGTEIPLDLTAENPNGIEFDNLYIDMNGIIHPCSHPEDKPPPESEEEMYKNIMDYIDRL 88
Query: 94 FRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKI 153
F VRPR+LLY+AIDGVAPRAKMNQ RSRRFR+++E E
Sbjct: 89 FSAVRPRRLLYLAIDGVAPRAKMNQ-------------------QRSRRFRSAQEAEEAA 129
Query: 154 AEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGW 213
+ R+ + G +PP+ + +DSN ITPGT FM LS L +Y+ DR+N D W
Sbjct: 130 ELMEETRQAMKEMGVKVPPKAKPA--WDSNIITPGTEFMHKLSRYLRFYVQDRVNRDKAW 187
Query: 214 KGIKVILSDANVP 226
+ IKVILSDA+ P
Sbjct: 188 QNIKVILSDASEP 200
>gi|351706558|gb|EHB09477.1| 5'-3' exoribonuclease 2 [Heterocephalus glaber]
Length = 176
Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 104/171 (60%), Positives = 114/171 (66%), Gaps = 20/171 (11%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
P + NG KIP D+SKPNPN +EFD LYLDMNGIIHPCTHPEDKP K E+EMMVAIFE +
Sbjct: 26 PPKCNGIKIPVDASKPNPNDVEFDKLYLDMNGIIHPCTHPEDKPTSKKEEEMMVAIFEYL 85
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
D LF IVR R+LLYMAIDGVAPRAKMNQ L SRRFRASKE
Sbjct: 86 DGLFNIVRARRLLYMAIDGVAPRAKMNQQL-------------------SRRFRASKEGM 126
Query: 151 EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHY 201
E E +RE+ LA G LPPE+ K FDS C TPGT FM L+ L Y
Sbjct: 127 EAAMEKQHVREETLAKGGYLPPEQIK-ERFDSYCTTPGTEFMDNLAKSLCY 176
>gi|340520299|gb|EGR50535.1| exoribonuclease [Trichoderma reesei QM6a]
Length = 1029
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 95/196 (48%), Positives = 124/196 (63%), Gaps = 23/196 (11%)
Query: 35 NGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLF 94
+G IP D+++PNPNG E DNLYLDMNGI+HPC+HPED+PAP DE+EMM+ +F DR+
Sbjct: 31 DGVTIPVDTTRPNPNGEELDNLYLDMNGIVHPCSHPEDRPAPADEEEMMLEVFRYTDRVV 90
Query: 95 RIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIA 154
+VRPRK+L +A+DGVAPRAKMNQ RSRRFR+++E EK
Sbjct: 91 NMVRPRKILMIAVDGVAPRAKMNQ-------------------QRSRRFRSAREAKEKEE 131
Query: 155 EVARIREKL-LADGCILPPEKEKG---SHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
+ + E L +G + + FDSN ITPGTPFM L+ L Y+ +LN D
Sbjct: 132 DKQALIELLKRQNGGVFEAADSEAVVKKAFDSNSITPGTPFMDILAVSLRYWCQYKLNTD 191
Query: 211 PGWKGIKVILSDANVP 226
P W +K+I+SDA VP
Sbjct: 192 PAWAKLKIIISDATVP 207
>gi|358400793|gb|EHK50119.1| hypothetical protein TRIATDRAFT_280608 [Trichoderma atroviride IMI
206040]
Length = 454
Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 96/196 (48%), Positives = 124/196 (63%), Gaps = 23/196 (11%)
Query: 35 NGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLF 94
+G IP D+++PNPNG E DNLYLDMNGI+HPC+HPED+PAP DE+EMM+ +F+ DR+
Sbjct: 31 DGITIPVDTTQPNPNGEELDNLYLDMNGIVHPCSHPEDRPAPADEEEMMLEVFKYTDRVV 90
Query: 95 RIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIA 154
+VRPRK+L +A+DGVAPRAKMNQ RSRRFR+++E EK
Sbjct: 91 NMVRPRKILMIAVDGVAPRAKMNQ-------------------QRSRRFRSAQEAKEKEE 131
Query: 155 EVARIRE--KLLADGCILPPEKEK--GSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
+ + E K G + E FDSN ITPGTPFM L+ L Y+ +LN D
Sbjct: 132 DKQALIELLKRQNGGTFAAADSETVVKKAFDSNSITPGTPFMDILALSLRYWCQYKLNTD 191
Query: 211 PGWKGIKVILSDANVP 226
P W +K+I+SDA VP
Sbjct: 192 PAWAKLKIIISDATVP 207
>gi|401623665|gb|EJS41757.1| rat1p [Saccharomyces arboricola H-6]
Length = 1006
Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 99/199 (49%), Positives = 128/199 (64%), Gaps = 26/199 (13%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
PQ V+G +P D S PNPNG E DNLYLDMNGI+HPC+HPE+KP P+ EDEM++A+FE
Sbjct: 26 PQVVDGVILPLDYSAPNPNG-ELDNLYLDMNGIVHPCSHPENKPPPETEDEMLLAVFEYT 84
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
+R+ + RPRK+L MA+DGVAPRAKMNQ R+RRFR++++
Sbjct: 85 NRVLNMARPRKVLVMAVDGVAPRAKMNQ-------------------QRARRFRSARDAQ 125
Query: 151 ---EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRL 207
E EV R RE++ G I+ +DSN ITPGTPFM L+A L Y+ +L
Sbjct: 126 VENEAREEVMRQREEV---GEIIDDAVRNKKTWDSNAITPGTPFMDKLAAALRYWTAFKL 182
Query: 208 NNDPGWKGIKVILSDANVP 226
DPGWK ++VI+SDA VP
Sbjct: 183 ATDPGWKNLQVIISDATVP 201
>gi|19115067|ref|NP_594155.1| 5'-3' exoribonuclease Dhp1 [Schizosaccharomyces pombe 972h-]
gi|729332|sp|P40848.1|XRN2_SCHPO RecName: Full=5'-3' exoribonuclease 2; AltName: Full=Protein dhp1
gi|496393|dbj|BAA04601.1| Dhp1 protein [Schizosaccharomyces pombe]
gi|1177359|emb|CAA93235.1| 5'-3' exoribonuclease Dhp1 [Schizosaccharomyces pombe]
Length = 991
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 103/192 (53%), Positives = 130/192 (67%), Gaps = 19/192 (9%)
Query: 35 NGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLF 94
+G +I D S PNPNG+E DNLYLDMNGI+HPC+HPED+PAP+ EDEMMVA+FE DR+
Sbjct: 31 DGTEIEPDLSLPNPNGVECDNLYLDMNGIVHPCSHPEDRPAPETEDEMMVAVFEYTDRIL 90
Query: 95 RIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIA 154
+VRPR+LL++AIDGVAPRAKMNQ RSRRFR+S+E A K
Sbjct: 91 AMVRPRQLLFIAIDGVAPRAKMNQ-------------------QRSRRFRSSREAALKEE 131
Query: 155 EVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWK 214
E+ E+ G + K +DSNCITPGTPFM L+ L YYI ++LN+DP W+
Sbjct: 132 ELQAFIEEAKQQGIPIDENATKKKSWDSNCITPGTPFMDTLAKSLRYYIINKLNSDPCWR 191
Query: 215 GIKVILSDANVP 226
++ ILSDA+VP
Sbjct: 192 NVRFILSDASVP 203
>gi|367010234|ref|XP_003679618.1| hypothetical protein TDEL_0B02780 [Torulaspora delbrueckii]
gi|359747276|emb|CCE90407.1| hypothetical protein TDEL_0B02780 [Torulaspora delbrueckii]
Length = 1030
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 98/203 (48%), Positives = 131/203 (64%), Gaps = 26/203 (12%)
Query: 27 LVSLPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAI 86
L PQ V+G +P D + PNPNG E DNLYLDMNGI+HPC+HPE+KP P+ EDEM++A+
Sbjct: 22 LEEQPQVVDGVTLPIDYAAPNPNG-ELDNLYLDMNGIVHPCSHPENKPPPETEDEMLLAV 80
Query: 87 FECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRAS 146
FE +R+ + RPRK+L +A+DGVAPRAKMNQ RSRRFR++
Sbjct: 81 FEYTNRVLNMARPRKVLMIAVDGVAPRAKMNQ-------------------QRSRRFRSA 121
Query: 147 KETA---EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYI 203
++ E +V R RE++ G + + +DSN ITPGTPFM L+A L Y+I
Sbjct: 122 RDAQVENEAREQVMREREQV---GEFIDDSVKNKKTWDSNAITPGTPFMDKLAAALRYWI 178
Query: 204 HDRLNNDPGWKGIKVILSDANVP 226
+L+ DPGWK ++VI+SDA VP
Sbjct: 179 SFKLSTDPGWKNLQVIISDATVP 201
>gi|255557927|ref|XP_002519992.1| 5'->3' exoribonuclease, putative [Ricinus communis]
gi|223540756|gb|EEF42316.1| 5'->3' exoribonuclease, putative [Ricinus communis]
Length = 1545
Score = 191 bits (484), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 102/192 (53%), Positives = 126/192 (65%), Gaps = 23/192 (11%)
Query: 35 NGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLF 94
NG +P +++ PNPNG+EFDNLYLDMNGIIHPC HP D P PK +E+ +F ID++F
Sbjct: 30 NGVLLPINTALPNPNGIEFDNLYLDMNGIIHPCFHPSDLPPPKTYEEVFRNVFMYIDKIF 89
Query: 95 RIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIA 154
+VRPRKLL++ IDGVAPRAKMNQ RSRRFRA+KE AEK
Sbjct: 90 SMVRPRKLLFLGIDGVAPRAKMNQ-------------------QRSRRFRAAKE-AEK-- 127
Query: 155 EVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWK 214
E ++++ + +G KE DSN ITPGT FM LS+ L YYI R+N D GW+
Sbjct: 128 EALKMKQFIELEGENSTSLKEPAV-LDSNVITPGTEFMDLLSSALRYYIRLRVNRDSGWR 186
Query: 215 GIKVILSDANVP 226
GIKVILSD+NVP
Sbjct: 187 GIKVILSDSNVP 198
>gi|326436856|gb|EGD82426.1| hypothetical protein PTSG_11962 [Salpingoeca sp. ATCC 50818]
Length = 1282
Score = 190 bits (483), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 100/200 (50%), Positives = 125/200 (62%), Gaps = 32/200 (16%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
PQ + G+ +P D S+PNPN EFDNLYLDMNGIIHP +HPED+PAP+ ED+M VA+ E +
Sbjct: 69 PQNIGGEYVPVDISQPNPNKREFDNLYLDMNGIIHPASHPEDRPAPETEDDMFVAVLEYL 128
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
DR+ VRPRKLL+MAIDGVAPRAKMNQ RSRRF+++K
Sbjct: 129 DRVVACVRPRKLLFMAIDGVAPRAKMNQ-------------------QRSRRFKSAKVCL 169
Query: 151 EKI----AEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDR 206
+ V + C+ FDSN ITPGTPFM L+ L +IH++
Sbjct: 170 NAVLWWGCVVGGGGVCISVCVCVT---------FDSNVITPGTPFMDKLAEYLRCFIHEK 220
Query: 207 LNNDPGWKGIKVILSDANVP 226
+++DPGW GIKVILSDA VP
Sbjct: 221 VSSDPGWTGIKVILSDATVP 240
>gi|358055903|dbj|GAA98248.1| hypothetical protein E5Q_04931 [Mixia osmundae IAM 14324]
Length = 1271
Score = 190 bits (483), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 108/231 (46%), Positives = 137/231 (59%), Gaps = 25/231 (10%)
Query: 1 MESTQEGSSVKSTPGRQDSKPYSFASLVSLPQEVNGQ----KIPFDSSKPNPNGMEFDNL 56
+ S +E K+ PG P + L + +G +IP D S PNPNG EFD L
Sbjct: 18 VTSVKEDLPTKAQPGASRLDPVTGQPLPGSEDDPDGGGEDVEIPVDMSLPNPNGEEFDCL 77
Query: 57 YLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKM 116
YLDMNGI+HPCTHPE KP P+ E +MMV IF +R+ ++RPRKLL +AIDGVAPRAKM
Sbjct: 78 YLDMNGIVHPCTHPEGKPPPETEADMMVEIFAYTERVVNMIRPRKLLLIAIDGVAPRAKM 137
Query: 117 NQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEV-ARIREKLLADGCILPPEKE 175
NQ RSRRFRAS+E K E A IRE A G + E +
Sbjct: 138 NQ-------------------QRSRRFRASQEAKTKAEEKEAAIRE-WEAMGKEVSDEYK 177
Query: 176 KGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
+D N ITPGTPFM L+A L Y++ +LN+DPGW ++V++SDA+VP
Sbjct: 178 DKKAWDQNAITPGTPFMDLLAASLRYWVASKLNSDPGWSKLQVVISDASVP 228
>gi|349581214|dbj|GAA26372.1| K7_Rat1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 1006
Score = 190 bits (482), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 99/203 (48%), Positives = 129/203 (63%), Gaps = 26/203 (12%)
Query: 27 LVSLPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAI 86
L PQ V+G +P D S PNPNG E DNLYLDMNGI+HPC+HPE+KP P+ EDEM++A+
Sbjct: 22 LEEQPQIVDGVILPLDYSAPNPNG-ELDNLYLDMNGIVHPCSHPENKPPPETEDEMLLAV 80
Query: 87 FECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRAS 146
FE +R+ + RPRK+L MA+DGVAPRAKMNQ R+RRFR++
Sbjct: 81 FEYTNRVLNMARPRKVLVMAVDGVAPRAKMNQ-------------------QRARRFRSA 121
Query: 147 KETA---EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYI 203
++ E E+ R RE++ G I+ +DSN ITPGTPFM L+A L Y+
Sbjct: 122 RDAQIENEAREEIMRQREEV---GEIIDDAVRNKKTWDSNAITPGTPFMDKLAAALRYWT 178
Query: 204 HDRLNNDPGWKGIKVILSDANVP 226
+L DPGWK ++VI+SDA VP
Sbjct: 179 AFKLATDPGWKNLQVIISDATVP 201
>gi|444315189|ref|XP_004178252.1| hypothetical protein TBLA_0A09480 [Tetrapisispora blattae CBS 6284]
gi|387511291|emb|CCH58733.1| hypothetical protein TBLA_0A09480 [Tetrapisispora blattae CBS 6284]
Length = 1063
Score = 190 bits (482), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 100/200 (50%), Positives = 132/200 (66%), Gaps = 26/200 (13%)
Query: 30 LPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFEC 89
LPQ V+G +P D S PNPNG E DNLYLDMNGI+HPC+HPE+KPAP+ EDEM++A+FE
Sbjct: 25 LPQVVDGVTLPIDYSAPNPNG-ELDNLYLDMNGIVHPCSHPENKPAPETEDEMLLAVFEY 83
Query: 90 IDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKET 149
+R+ + RPRK+L +A+DGVAPRAKMNQ R+RRFR++++
Sbjct: 84 TNRVLNMARPRKVLMIAVDGVAPRAKMNQ-------------------QRARRFRSARDA 124
Query: 150 A-EKIAEVARI--REKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDR 206
+ E A A + REK+ G I+ + +DSN ITPGTPFM L+A L Y+I +
Sbjct: 125 SIENQAREAILNEREKI---GEIIDESLKSKKTWDSNAITPGTPFMDKLAAALRYWISFK 181
Query: 207 LNNDPGWKGIKVILSDANVP 226
L D GWK ++VI+SDA VP
Sbjct: 182 LATDLGWKNLQVIISDATVP 201
>gi|256273435|gb|EEU08371.1| Rat1p [Saccharomyces cerevisiae JAY291]
Length = 1006
Score = 190 bits (482), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 99/203 (48%), Positives = 129/203 (63%), Gaps = 26/203 (12%)
Query: 27 LVSLPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAI 86
L PQ V+G +P D S PNPNG E DNLYLDMNGI+HPC+HPE+KP P+ EDEM++A+
Sbjct: 22 LEEQPQIVDGVILPLDYSAPNPNG-ELDNLYLDMNGIVHPCSHPENKPPPETEDEMLLAV 80
Query: 87 FECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRAS 146
FE +R+ + RPRK+L MA+DGVAPRAKMNQ R+RRFR++
Sbjct: 81 FEYTNRVLNMARPRKVLVMAVDGVAPRAKMNQ-------------------QRARRFRSA 121
Query: 147 KETA---EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYI 203
++ E E+ R RE++ G I+ +DSN ITPGTPFM L+A L Y+
Sbjct: 122 RDAQIENEAREEIMRQREEV---GEIIDDAVRNKKTWDSNAITPGTPFMDKLAAALRYWT 178
Query: 204 HDRLNNDPGWKGIKVILSDANVP 226
+L DPGWK ++VI+SDA VP
Sbjct: 179 AFKLATDPGWKNLQVIISDATVP 201
>gi|151945677|gb|EDN63918.1| 5'-3'-exoribonuclease [Saccharomyces cerevisiae YJM789]
gi|190407386|gb|EDV10653.1| 5'-3' exoribonuclease [Saccharomyces cerevisiae RM11-1a]
gi|259149530|emb|CAY86334.1| Rat1p [Saccharomyces cerevisiae EC1118]
gi|323346498|gb|EGA80785.1| Rat1p [Saccharomyces cerevisiae Lalvin QA23]
gi|365763283|gb|EHN04813.1| Rat1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 1006
Score = 190 bits (482), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 99/203 (48%), Positives = 129/203 (63%), Gaps = 26/203 (12%)
Query: 27 LVSLPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAI 86
L PQ V+G +P D S PNPNG E DNLYLDMNGI+HPC+HPE+KP P+ EDEM++A+
Sbjct: 22 LEEQPQIVDGVILPLDYSAPNPNG-ELDNLYLDMNGIVHPCSHPENKPPPETEDEMLLAV 80
Query: 87 FECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRAS 146
FE +R+ + RPRK+L MA+DGVAPRAKMNQ R+RRFR++
Sbjct: 81 FEYTNRVLNMARPRKVLVMAVDGVAPRAKMNQ-------------------QRARRFRSA 121
Query: 147 KETA---EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYI 203
++ E E+ R RE++ G I+ +DSN ITPGTPFM L+A L Y+
Sbjct: 122 RDAQIENEAREEIMRQREEV---GEIIDDAVRNKKTWDSNAITPGTPFMDKLAAALRYWT 178
Query: 204 HDRLNNDPGWKGIKVILSDANVP 226
+L DPGWK ++VI+SDA VP
Sbjct: 179 AFKLATDPGWKNLQVIISDATVP 201
>gi|392296379|gb|EIW07481.1| Rat1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 1006
Score = 189 bits (481), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 99/203 (48%), Positives = 129/203 (63%), Gaps = 26/203 (12%)
Query: 27 LVSLPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAI 86
L PQ V+G +P D S PNPNG E DNLYLDMNGI+HPC+HPE+KP P+ EDEM++A+
Sbjct: 22 LEEQPQIVDGVILPLDYSAPNPNG-ELDNLYLDMNGIVHPCSHPENKPPPETEDEMLLAV 80
Query: 87 FECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRAS 146
FE +R+ + RPRK+L MA+DGVAPRAKMNQ R+RRFR++
Sbjct: 81 FEYTNRVLNMARPRKVLVMAVDGVAPRAKMNQ-------------------QRARRFRSA 121
Query: 147 KETA---EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYI 203
++ E E+ R RE++ G I+ +DSN ITPGTPFM L+A L Y+
Sbjct: 122 RDAQIENEAREEIMRQREEV---GEIIDDAVRNKKTWDSNAITPGTPFMDKLAAALRYWT 178
Query: 204 HDRLNNDPGWKGIKVILSDANVP 226
+L DPGWK ++VI+SDA VP
Sbjct: 179 AFKLATDPGWKNLQVIISDATVP 201
>gi|366995071|ref|XP_003677299.1| hypothetical protein NCAS_0G00590 [Naumovozyma castellii CBS 4309]
gi|342303168|emb|CCC70946.1| hypothetical protein NCAS_0G00590 [Naumovozyma castellii CBS 4309]
Length = 1012
Score = 189 bits (481), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 95/203 (46%), Positives = 131/203 (64%), Gaps = 26/203 (12%)
Query: 27 LVSLPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAI 86
L PQ ++G +P D S PNPNG E DNLYLDMNGI+HPC+HPE++P P+ EDEM++A+
Sbjct: 22 LEETPQVIDGVTLPLDYSAPNPNG-ELDNLYLDMNGIVHPCSHPENRPPPETEDEMLLAV 80
Query: 87 FECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRAS 146
FE +R+ + RPRK+L MA+DGVAPRAKMNQ R+RRFR++
Sbjct: 81 FEYTNRVLNMARPRKVLVMAVDGVAPRAKMNQ-------------------QRARRFRSA 121
Query: 147 KETA---EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYI 203
++ A E E+ R +E++ G ++ + +DSN ITPGTPFM L+A L Y+
Sbjct: 122 RDAAIENEAREEILRQKEEI---GEVIDEAVKNKKTWDSNAITPGTPFMDKLAASLRYWT 178
Query: 204 HDRLNNDPGWKGIKVILSDANVP 226
+L DPGWK +++I+SDA VP
Sbjct: 179 AFKLATDPGWKNLQIIISDATVP 201
>gi|207341239|gb|EDZ69347.1| YOR048Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 1006
Score = 189 bits (481), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 99/203 (48%), Positives = 129/203 (63%), Gaps = 26/203 (12%)
Query: 27 LVSLPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAI 86
L PQ V+G +P D S PNPNG E DNLYLDMNGI+HPC+HPE+KP P+ EDEM++A+
Sbjct: 22 LEEQPQIVDGVILPLDYSAPNPNG-ELDNLYLDMNGIVHPCSHPENKPPPETEDEMLLAV 80
Query: 87 FECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRAS 146
FE +R+ + RPRK+L MA+DGVAPRAKMNQ R+RRFR++
Sbjct: 81 FEYTNRVLNMARPRKVLVMAVDGVAPRAKMNQ-------------------QRARRFRSA 121
Query: 147 KETA---EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYI 203
++ E E+ R RE++ G I+ +DSN ITPGTPFM L+A L Y+
Sbjct: 122 RDAQIENEAREEIMRQREEV---GEIIDDAVRNKKTWDSNAITPGTPFMDKLAAALRYWT 178
Query: 204 HDRLNNDPGWKGIKVILSDANVP 226
+L DPGWK ++VI+SDA VP
Sbjct: 179 AFKLATDPGWKNLQVIISDATVP 201
>gi|326435791|gb|EGD81361.1| hypothetical protein PTSG_11834 [Salpingoeca sp. ATCC 50818]
Length = 1592
Score = 189 bits (481), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 98/196 (50%), Positives = 129/196 (65%), Gaps = 26/196 (13%)
Query: 36 GQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFR 95
G+ ++++P +G+EFDNLYLDMNGIIHPC HPED+ P E+ MM AIFE ID +F
Sbjct: 303 GELRTLEAAQPEHDGIEFDNLYLDMNGIIHPCCHPEDREPPATEEAMMEAIFEYIDHVFT 362
Query: 96 IVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAE 155
+VRPR+LLY+AIDGVAPRAKMNQ R+RRFR+++E ++
Sbjct: 363 LVRPRRLLYLAIDGVAPRAKMNQ-------------------QRARRFRSAQEAEDRKRV 403
Query: 156 VARIREKLLADGCILPPE-----KEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
+ + E L ADG + P+ +K FDSNCITPGTPFMA L+ L YI DRL+++
Sbjct: 404 IEKRVEALEADG--VAPKYYYQVTKKKMSFDSNCITPGTPFMARLAQRLREYIDDRLHSN 461
Query: 211 PGWKGIKVILSDANVP 226
WK ++VILSDA+VP
Sbjct: 462 AAWKDVQVILSDASVP 477
>gi|346319605|gb|EGX89206.1| 5'-3' exoribonuclease Dhp1 [Cordyceps militaris CM01]
Length = 970
Score = 189 bits (480), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 96/196 (48%), Positives = 127/196 (64%), Gaps = 23/196 (11%)
Query: 35 NGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLF 94
+G IP D ++ NPNG E DNLYLDMNGI+HPC+HP+DKPAP+DE+EMM+ IF+ DR+
Sbjct: 31 DGTAIPVDITRANPNGEELDNLYLDMNGIVHPCSHPDDKPAPEDEEEMMLEIFKYTDRVL 90
Query: 95 RIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIA 154
+VRPRK+L +A+DGVAPRAKMNQ RSRRFR+++E +K
Sbjct: 91 NMVRPRKILMIAVDGVAPRAKMNQ-------------------QRSRRFRSAQEAKDKEN 131
Query: 155 EVARIREKL-LADGCILPPEKEKG---SHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
+ + + L +G L E + FD+N ITPGTPFM L++ L Y+ +LN D
Sbjct: 132 DKQELIKLLKQQNGGNLATESTEAIAKKAFDNNSITPGTPFMDILASSLRYWCQYKLNTD 191
Query: 211 PGWKGIKVILSDANVP 226
PGW +KVI+SDA VP
Sbjct: 192 PGWAKLKVIISDATVP 207
>gi|405121347|gb|AFR96116.1| 5'-3' exoribonuclease 2 [Cryptococcus neoformans var. grubii H99]
Length = 1129
Score = 189 bits (480), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 95/187 (50%), Positives = 118/187 (63%), Gaps = 19/187 (10%)
Query: 40 PFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRP 99
P PNPNG E DNLYLDMNGI+HPCTHPE +PAP+ E+EMMV IF+ +R+ + RP
Sbjct: 40 PIRYENPNPNGFEVDNLYLDMNGIVHPCTHPEGRPAPETEEEMMVEIFKYTERVVNMCRP 99
Query: 100 RKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARI 159
RK+L MAIDGVAPRAKMNQ RSRRFRA++E A+K E
Sbjct: 100 RKVLMMAIDGVAPRAKMNQ-------------------QRSRRFRAAQEAADKEEERKEA 140
Query: 160 REKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVI 219
+ A G + E +D+N ITPGTPFM LS L Y++ +L DPGWK +K+I
Sbjct: 141 IKLFEAMGHAVSEETANHKSWDTNAITPGTPFMDLLSISLKYWVSHKLTTDPGWKDLKII 200
Query: 220 LSDANVP 226
LSD++VP
Sbjct: 201 LSDSSVP 207
>gi|403163709|ref|XP_003323763.2| hypothetical protein PGTG_05665 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375164418|gb|EFP79344.2| hypothetical protein PGTG_05665 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 1203
Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 98/191 (51%), Positives = 123/191 (64%), Gaps = 20/191 (10%)
Query: 37 QKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRI 96
+++P D S+ NPNGMEFDNLYLDMNGI+HPCTHPE K P+ E EMM+ +F+ +R+ +
Sbjct: 36 EEVPIDMSQRNPNGMEFDNLYLDMNGIVHPCTHPEGKKPPETEAEMMIEVFKYTERVVNM 95
Query: 97 VRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEV 156
VRPRKLL +AIDGVAPRAKMNQ RSRRFRA++E K E
Sbjct: 96 VRPRKLLMIAIDGVAPRAKMNQ-------------------QRSRRFRAAQEAKVKEEEK 136
Query: 157 ARIREKLLADGCILPPE-KEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKG 215
+ E+ G LP + K +DSN ITPGTPFM L+ L Y+I ++N D GW
Sbjct: 137 QALIEEYKQQGKELPEDYKTDKKAWDSNAITPGTPFMTLLTESLRYWIVYKMNTDKGWSQ 196
Query: 216 IKVILSDANVP 226
I+VILSDA+VP
Sbjct: 197 IQVILSDASVP 207
>gi|58268722|ref|XP_571517.1| 5'-3' exoribonuclease [Cryptococcus neoformans var. neoformans
JEC21]
gi|338819739|sp|P0CL88.1|XRN2_CRYNJ RecName: Full=5'-3' exoribonuclease 2
gi|57227752|gb|AAW44210.1| 5'-3' exoribonuclease, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 1127
Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 95/187 (50%), Positives = 118/187 (63%), Gaps = 19/187 (10%)
Query: 40 PFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRP 99
P PNPNG E DNLYLDMNGI+HPCTHPE +PAP+ E+EMMV IF+ +R+ + RP
Sbjct: 40 PIRYENPNPNGFEVDNLYLDMNGIVHPCTHPEGRPAPETEEEMMVEIFKYTERVVNMCRP 99
Query: 100 RKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARI 159
RK+L MAIDGVAPRAKMNQ RSRRFRA++E A+K E
Sbjct: 100 RKVLMMAIDGVAPRAKMNQ-------------------QRSRRFRAAQEAADKEEERREA 140
Query: 160 REKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVI 219
+ A G + E +D+N ITPGTPFM LS L Y++ +L DPGWK +K+I
Sbjct: 141 IKLFEAMGHAVSEETANHKSWDTNAITPGTPFMDLLSISLKYWVSHKLTTDPGWKDLKII 200
Query: 220 LSDANVP 226
LSD++VP
Sbjct: 201 LSDSSVP 207
>gi|134113168|ref|XP_774609.1| hypothetical protein CNBF2890 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|338819738|sp|P0CL89.1|XRN2_CRYNB RecName: Full=5'-3' exoribonuclease 2
gi|50257253|gb|EAL19962.1| hypothetical protein CNBF2890 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 1130
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 95/187 (50%), Positives = 118/187 (63%), Gaps = 19/187 (10%)
Query: 40 PFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRP 99
P PNPNG E DNLYLDMNGI+HPCTHPE +PAP+ E+EMMV IF+ +R+ + RP
Sbjct: 40 PIRYENPNPNGFEVDNLYLDMNGIVHPCTHPEGRPAPETEEEMMVEIFKYTERVVNMCRP 99
Query: 100 RKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARI 159
RK+L MAIDGVAPRAKMNQ RSRRFRA++E A+K E
Sbjct: 100 RKVLMMAIDGVAPRAKMNQ-------------------QRSRRFRAAQEAADKEEERREA 140
Query: 160 REKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVI 219
+ A G + E +D+N ITPGTPFM LS L Y++ +L DPGWK +K+I
Sbjct: 141 IKLFEAMGHAVSEETANHKSWDTNAITPGTPFMDLLSISLKYWVSHKLTTDPGWKDLKII 200
Query: 220 LSDANVP 226
LSD++VP
Sbjct: 201 LSDSSVP 207
>gi|443899706|dbj|GAC77035.1| multidrug resistance-associated protein [Pseudozyma antarctica
T-34]
Length = 1165
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 106/192 (55%), Positives = 128/192 (66%), Gaps = 25/192 (13%)
Query: 39 IPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVR 98
+P D+S PNPNG EFD LYLDMNGI+HPCTHPE KPAP+ E+EMMV +F +R+ +VR
Sbjct: 39 LPLDTSTPNPNGEEFDCLYLDMNGIVHPCTHPEGKPAPETEEEMMVEVFAYTERVVSMVR 98
Query: 99 PRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAE--- 155
PR+LL MAIDGVAPRAKMNQ RSRRFRA+KE EK E
Sbjct: 99 PRRLLMMAIDGVAPRAKMNQ-------------------QRSRRFRAAKEAREKHEETQA 139
Query: 156 -VARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWK 214
+A R K LA P E +K +DSN ITPGTPFM L+A L Y++ ++N DPGWK
Sbjct: 140 ALAEWRAKGLAVTEDAPKESKKA--WDSNAITPGTPFMDLLAASLRYWVAHKINTDPGWK 197
Query: 215 GIKVILSDANVP 226
I+VI+SDA+VP
Sbjct: 198 DIQVIISDASVP 209
>gi|321260270|ref|XP_003194855.1| strand exchange protein (5'-3' exoribonuclease) [Cryptococcus
gattii WM276]
gi|317461327|gb|ADV23068.1| Strand exchange protein (5'-3' exoribonuclease), putative
[Cryptococcus gattii WM276]
Length = 1129
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 95/187 (50%), Positives = 118/187 (63%), Gaps = 19/187 (10%)
Query: 40 PFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRP 99
P PNPNG E DNLYLDMNGI+HPCTHPE +PAP+ E+EMMV IF+ +R+ + RP
Sbjct: 40 PIRYENPNPNGFEVDNLYLDMNGIVHPCTHPEGRPAPETEEEMMVEIFKYTERVVNMCRP 99
Query: 100 RKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARI 159
RK+L MAIDGVAPRAKMNQ RSRRFRA++E A+K E
Sbjct: 100 RKVLMMAIDGVAPRAKMNQ-------------------QRSRRFRAAQEAADKEEERKEA 140
Query: 160 REKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVI 219
+ A G + E +D+N ITPGTPFM LS L Y++ +L DPGWK +K+I
Sbjct: 141 VKLFEAMGHTVSEETANRKSWDTNAITPGTPFMDLLSISLKYWVSYKLTTDPGWKDLKII 200
Query: 220 LSDANVP 226
LSD++VP
Sbjct: 201 LSDSSVP 207
>gi|395851967|ref|XP_003798518.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 2 [Otolemur garnettii]
Length = 908
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 102/164 (62%), Positives = 114/164 (69%), Gaps = 22/164 (13%)
Query: 63 IIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTV 122
II C E+K +PK+EDEMMVAIFE IDRLF IVRPR+LLYMAIDGVAPRAKMNQ
Sbjct: 17 IIVNCV--EEKTSPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQ---- 70
Query: 123 YSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDS 182
RSRRFRASKE E E R+RE++LA G LPPE+ K FDS
Sbjct: 71 ---------------QRSRRFRASKEGMEAALEKQRVREEILAKGGFLPPEEIK-ERFDS 114
Query: 183 NCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
NCITPGT FM L+ CL YYI DRLNNDPGW+ + VILSDA+VP
Sbjct: 115 NCITPGTEFMDNLAKCLRYYIADRLNNDPGWENLTVILSDASVP 158
>gi|365987598|ref|XP_003670630.1| hypothetical protein NDAI_0F00680 [Naumovozyma dairenensis CBS 421]
gi|343769401|emb|CCD25387.1| hypothetical protein NDAI_0F00680 [Naumovozyma dairenensis CBS 421]
Length = 1034
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 96/199 (48%), Positives = 129/199 (64%), Gaps = 26/199 (13%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
PQ V+ K+P D S PNPNG E DNLYLDMNGI+HPC+HPE+KP P+ EDEM++A+FE
Sbjct: 26 PQIVDNVKLPLDYSLPNPNG-ELDNLYLDMNGIVHPCSHPENKPPPETEDEMLLAVFEYT 84
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
+R+ + RPRK+L MA+DGVAPRAKMNQ R+RRFR++++
Sbjct: 85 NRVLNMARPRKVLVMAVDGVAPRAKMNQ-------------------QRARRFRSARDAQ 125
Query: 151 ---EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRL 207
E E+ R +E++ G ++ + +DSN ITPGTPFM L+A L Y+ +L
Sbjct: 126 IENEAREEILRQKEEI---GEMIDDAVKNKKTWDSNAITPGTPFMDKLAAALRYWTAFKL 182
Query: 208 NNDPGWKGIKVILSDANVP 226
DPGWK ++VI+SDA VP
Sbjct: 183 ATDPGWKSLQVIISDATVP 201
>gi|297737374|emb|CBI26575.3| unnamed protein product [Vitis vinifera]
Length = 845
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 97/174 (55%), Positives = 117/174 (67%), Gaps = 20/174 (11%)
Query: 53 FDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAP 112
FDNLYLDMNGIIHPC HPE PAPK ++ A+F+ IDR+F +VRPRKLLYMAIDGVAP
Sbjct: 29 FDNLYLDMNGIIHPCFHPEGLPAPKTYTDVFKAVFKYIDRIFSLVRPRKLLYMAIDGVAP 88
Query: 113 RAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCILPP 172
RAKMNQ R+RRFRA+KE A+ + R++ ++ +L
Sbjct: 89 RAKMNQ-------------------QRARRFRAAKEAADDASGTERLKTVFESEMEML-A 128
Query: 173 EKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
++ DSN ITPGT FMA LS+ L YYIH R+N DPGW+GIKVILSDANVP
Sbjct: 129 LLDQTKKLDSNVITPGTEFMALLSSALKYYIHLRMNLDPGWRGIKVILSDANVP 182
>gi|322709893|gb|EFZ01468.1| 5'->3' exoribonculease Dhp1 [Metarhizium anisopliae ARSEF 23]
Length = 930
Score = 187 bits (475), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 96/196 (48%), Positives = 126/196 (64%), Gaps = 23/196 (11%)
Query: 35 NGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLF 94
+G +P D+S NPNG EFDNLYLDMNGI+HPC+HPEDKPAP+DE+ MM+ +F+ DR+
Sbjct: 31 DGSIVPVDTSSRNPNGEEFDNLYLDMNGIVHPCSHPEDKPAPEDEEAMMLEVFKYTDRVV 90
Query: 95 RIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIA 154
+VRPRKLL +A+DGVAPRAKMNQ RSRRFR++++ EK
Sbjct: 91 NMVRPRKLLMIAVDGVAPRAKMNQ-------------------QRSRRFRSAQDAKEKEE 131
Query: 155 EVARIREKL-LADGCILPP---EKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
+ + + +G +LPP E FD+N ITPGTPFM L+ L Y+ +LN D
Sbjct: 132 NKKELLKLVKQQNGGVLPPDHIESVAKKVFDNNSITPGTPFMDILAVSLRYWCQYKLNTD 191
Query: 211 PGWKGIKVILSDANVP 226
P W +KV++SDA VP
Sbjct: 192 PAWAKMKVLISDATVP 207
>gi|6324622|ref|NP_014691.1| Rat1p [Saccharomyces cerevisiae S288c]
gi|417592|sp|Q02792.3|XRN2_YEAST RecName: Full=5'-3' exoribonuclease 2; AltName: Full=Ribonucleic
acid-trafficking protein 1; AltName: Full=p116
gi|172365|gb|AAA34960.1| Rat1p [Saccharomyces cerevisiae]
gi|386005|gb|AAB26818.1| transcription activator [Saccharomyces cerevisiae]
gi|1420179|emb|CAA99240.1| RAT1 [Saccharomyces cerevisiae]
gi|285814937|tpg|DAA10830.1| TPA: Rat1p [Saccharomyces cerevisiae S288c]
Length = 1006
Score = 187 bits (474), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 98/203 (48%), Positives = 128/203 (63%), Gaps = 26/203 (12%)
Query: 27 LVSLPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAI 86
L PQ V+G +P D S NPNG E DNLYLDMNGI+HPC+HPE+KP P+ EDEM++A+
Sbjct: 22 LEEQPQIVDGVILPLDYSASNPNG-ELDNLYLDMNGIVHPCSHPENKPPPETEDEMLLAV 80
Query: 87 FECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRAS 146
FE +R+ + RPRK+L MA+DGVAPRAKMNQ R+RRFR++
Sbjct: 81 FEYTNRVLNMARPRKVLVMAVDGVAPRAKMNQ-------------------QRARRFRSA 121
Query: 147 KETA---EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYI 203
++ E E+ R RE++ G I+ +DSN ITPGTPFM L+A L Y+
Sbjct: 122 RDAQIENEAREEIMRQREEV---GEIIDDAVRNKKTWDSNAITPGTPFMDKLAAALRYWT 178
Query: 204 HDRLNNDPGWKGIKVILSDANVP 226
+L DPGWK ++VI+SDA VP
Sbjct: 179 AFKLATDPGWKNLQVIISDATVP 201
>gi|254579256|ref|XP_002495614.1| ZYRO0B15642p [Zygosaccharomyces rouxii]
gi|238938504|emb|CAR26681.1| ZYRO0B15642p [Zygosaccharomyces rouxii]
Length = 1012
Score = 187 bits (474), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 94/196 (47%), Positives = 126/196 (64%), Gaps = 20/196 (10%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
PQ V+G +P D + PNPNG E DNLYLDMNGI+HPC+HPE+KP P+ EDEM++A+FE
Sbjct: 26 PQVVDGVTLPIDYTAPNPNG-ELDNLYLDMNGIVHPCSHPENKPPPETEDEMLLAVFEYT 84
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
+R+ + RPRK+L +A+DGVAPRAKMNQ R+RRFR++K+
Sbjct: 85 NRVLNMARPRKVLMIAVDGVAPRAKMNQ-------------------QRARRFRSAKDAQ 125
Query: 151 EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
+ RI ++ G I+ + +DSN ITPGTPFM L+A L Y+ +L D
Sbjct: 126 IENENRERIMQEREQLGEIIDGAVKTKKTWDSNAITPGTPFMDKLAAALRYWCSFKLATD 185
Query: 211 PGWKGIKVILSDANVP 226
PGWK ++VI+SDA VP
Sbjct: 186 PGWKNLQVIISDATVP 201
>gi|224123990|ref|XP_002319214.1| predicted protein [Populus trichocarpa]
gi|222857590|gb|EEE95137.1| predicted protein [Populus trichocarpa]
Length = 692
Score = 186 bits (473), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 107/200 (53%), Positives = 130/200 (65%), Gaps = 32/200 (16%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
P +NG +P D+S PNPNG+EFDNLYLDMNGIIHPC HPE P P +E+ A+F+ I
Sbjct: 26 PLLINGVSVPLDTSCPNPNGIEFDNLYLDMNGIIHPCFHPEGLPPPTTYEEVFAAVFKYI 85
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
DR+F I+RPRKLL+MAIDGVAPRAKMNQ RSRRFRA+++ A
Sbjct: 86 DRIFSIIRPRKLLFMAIDGVAPRAKMNQ-------------------QRSRRFRAARDAA 126
Query: 151 EKIAEVARIREKLLADGCILPPEKEKGS-----HFDSNCITPGTPFMACLSACLHYYIHD 205
++ + DG I+ PE E+G+ DSN ITPGT FM LS+ LHYYI
Sbjct: 127 DQALSIE-------TDGGIV-PESEEGNLEQVKKLDSNVITPGTEFMDLLSSALHYYIRL 178
Query: 206 RLNNDPGWKGIKVILSDANV 225
R+ D GW+GIKVILSDANV
Sbjct: 179 RMKEDLGWRGIKVILSDANV 198
>gi|71024163|ref|XP_762311.1| hypothetical protein UM06164.1 [Ustilago maydis 521]
gi|74698979|sp|Q4P149.3|XRN2_USTMA RecName: Full=5'-3' exoribonuclease 2
gi|46101835|gb|EAK87068.1| hypothetical protein UM06164.1 [Ustilago maydis 521]
Length = 1233
Score = 186 bits (473), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 102/189 (53%), Positives = 125/189 (66%), Gaps = 20/189 (10%)
Query: 39 IPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVR 98
+P D+S PNPNG EFD LYLDMNGI+HPCTHPE KPAP+ E+EMMV +F +R+ +VR
Sbjct: 39 LPLDTSTPNPNGEEFDCLYLDMNGIVHPCTHPEGKPAPETEEEMMVEVFAYTERVVNMVR 98
Query: 99 PRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVAR 158
PR+LL MAIDGVAPRAKMNQ RSRRFRA+KE EK E
Sbjct: 99 PRRLLMMAIDGVAPRAKMNQ-------------------QRSRRFRAAKEAREKHEEEQA 139
Query: 159 IREKLLADGC-ILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIK 217
+ A G EK+ +DSN ITPGTPFM L+A L Y++ ++N+DPGWK I+
Sbjct: 140 ALAEWKAKGLGATDDEKKSKRAWDSNAITPGTPFMDLLAASLRYWVAQKINSDPGWKDIQ 199
Query: 218 VILSDANVP 226
VI+SDA+VP
Sbjct: 200 VIISDASVP 208
>gi|410078313|ref|XP_003956738.1| hypothetical protein KAFR_0C06110 [Kazachstania africana CBS 2517]
gi|372463322|emb|CCF57603.1| hypothetical protein KAFR_0C06110 [Kazachstania africana CBS 2517]
Length = 1039
Score = 186 bits (472), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 94/200 (47%), Positives = 124/200 (62%), Gaps = 20/200 (10%)
Query: 27 LVSLPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAI 86
L PQ V+G +P D + PNPNG E DNLYLDMNGI+HPC+HPE+KP P+ EDEM++A+
Sbjct: 22 LEEYPQVVDGVALPIDYASPNPNG-ELDNLYLDMNGIVHPCSHPENKPPPETEDEMLLAV 80
Query: 87 FECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRAS 146
FE +R+ + RPRK+L MA+DGVAPRAKMNQ R+RRFR++
Sbjct: 81 FEYTNRVLNMARPRKVLLMAVDGVAPRAKMNQ-------------------QRARRFRSA 121
Query: 147 KETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDR 206
++ + G I+ +K +DSN ITPGTPFM L+A L Y+ +
Sbjct: 122 RDAQIANEAREEELRERENYGEIIDDALKKKKTWDSNAITPGTPFMDKLAAALRYWTAFK 181
Query: 207 LNNDPGWKGIKVILSDANVP 226
L DPGWK ++VI+SDA VP
Sbjct: 182 LATDPGWKNLQVIISDATVP 201
>gi|322692778|gb|EFY84668.1| 5'-3' exoribonuclease 2 [Metarhizium acridum CQMa 102]
Length = 929
Score = 186 bits (471), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 95/196 (48%), Positives = 125/196 (63%), Gaps = 23/196 (11%)
Query: 35 NGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLF 94
+G +P D++ NPNG EFDNLYLDMNGI+HPC HPEDKPAP+DE+ MM+ +F+ DR+
Sbjct: 31 DGSTVPVDTTSRNPNGEEFDNLYLDMNGIVHPCAHPEDKPAPEDEEAMMLEVFKYTDRVV 90
Query: 95 RIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIA 154
+VRPRKLL +A+DGVAPRAKMNQ RSRRFR++++ EK
Sbjct: 91 NMVRPRKLLMIAVDGVAPRAKMNQ-------------------QRSRRFRSAQDAKEKEE 131
Query: 155 EVARIREKL-LADGCILPP---EKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
+ + + +G +LPP E FD+N ITPGTPFM L+ L Y+ +LN D
Sbjct: 132 NKEELLKLVKQQNGGVLPPDHIESVAKKIFDNNSITPGTPFMDILAVSLRYWCQYKLNTD 191
Query: 211 PGWKGIKVILSDANVP 226
P W +KV++SDA VP
Sbjct: 192 PAWAKMKVLISDATVP 207
>gi|407922574|gb|EKG15671.1| Zinc finger CCHC-type protein [Macrophomina phaseolina MS6]
Length = 1073
Score = 186 bits (471), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 97/209 (46%), Positives = 128/209 (61%), Gaps = 41/209 (19%)
Query: 35 NGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLF 94
+G P D++KPNPNG EFDNLYLDMNGI+HPC+HPEDK P++E+EMM+ +F+ DR+
Sbjct: 31 DGTVEPVDTTKPNPNGEEFDNLYLDMNGIVHPCSHPEDKDPPENEEEMMIEVFKYTDRVV 90
Query: 95 RIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIA 154
+VRPRKLL +A+DGVAPRAKMNQ RSRRFRA+++ +K A
Sbjct: 91 NMVRPRKLLMIAVDGVAPRAKMNQ-------------------QRSRRFRAAQDAKQKDA 131
Query: 155 EVARIREKLLADGCILPPEKEKGSH-----------------FDSNCITPGTPFMACLSA 197
+ A + L + + +GS +DSN ITPGTPFM L+
Sbjct: 132 DAAEFAKMLASQ-----KKNRRGSGSDEDEEESAEAQIVKKTWDSNSITPGTPFMDILAK 186
Query: 198 CLHYYIHDRLNNDPGWKGIKVILSDANVP 226
L Y+ +LN DPGW+ +KVI+SDA VP
Sbjct: 187 SLRYWCAYKLNTDPGWEKLKVIISDATVP 215
>gi|38569540|gb|AAR24369.1| 5'-3' exoribonuclease 2 isoform 3 [Homo sapiens]
Length = 907
Score = 186 bits (471), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 101/164 (61%), Positives = 112/164 (68%), Gaps = 22/164 (13%)
Query: 63 IIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTV 122
II C E+K + K+EDEMMVAIFE IDRLF IVRPR+LLYMAIDGVAPRAKMNQ
Sbjct: 17 IIVNCV--EEKTSTKNEDEMMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQ---- 70
Query: 123 YSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDS 182
RSRRFRASKE E E R+RE++LA G LPPE+ K FDS
Sbjct: 71 ---------------QRSRRFRASKEGMEAAVEKQRVREEILAKGGFLPPEEIK-ERFDS 114
Query: 183 NCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
NCITPGT FM L+ CL YYI DRLNNDPGWK + VILSDA+ P
Sbjct: 115 NCITPGTEFMDNLAKCLRYYIADRLNNDPGWKNLTVILSDASAP 158
>gi|156839637|ref|XP_001643507.1| hypothetical protein Kpol_473p8 [Vanderwaltozyma polyspora DSM
70294]
gi|156114121|gb|EDO15649.1| hypothetical protein Kpol_473p8 [Vanderwaltozyma polyspora DSM
70294]
Length = 1057
Score = 185 bits (470), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 98/203 (48%), Positives = 132/203 (65%), Gaps = 26/203 (12%)
Query: 27 LVSLPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAI 86
L PQ V+G ++P D S PN NG E DNLYLDMNGI+HPC+HPE+KP P++EDEM++A+
Sbjct: 22 LEDAPQVVDGVQLPIDYSAPNQNG-ELDNLYLDMNGIVHPCSHPENKPPPENEDEMLLAV 80
Query: 87 FECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRAS 146
FE +R+ + RPRK+L +A+DGVAPRAKMNQ R+RRFR++
Sbjct: 81 FEYTNRVLNMARPRKVLMIAVDGVAPRAKMNQ-------------------QRARRFRSA 121
Query: 147 KETAEKIAEVAR---IREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYI 203
++ KI + AR +REK I + K + +DSN ITPGTPFM L+A L Y+
Sbjct: 122 RDA--KIQDEAREEIMREKEEIGEHIDESVRNKKT-WDSNAITPGTPFMDKLAAALRYWT 178
Query: 204 HDRLNNDPGWKGIKVILSDANVP 226
+L DPGWK +++I+SDA VP
Sbjct: 179 AFKLATDPGWKNLQIIISDATVP 201
>gi|367005296|ref|XP_003687380.1| hypothetical protein TPHA_0J01240 [Tetrapisispora phaffii CBS 4417]
gi|357525684|emb|CCE64946.1| hypothetical protein TPHA_0J01240 [Tetrapisispora phaffii CBS 4417]
Length = 1113
Score = 185 bits (470), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 96/204 (47%), Positives = 131/204 (64%), Gaps = 28/204 (13%)
Query: 27 LVSLPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAI 86
L PQ V+G +P D S NPNG E DNLYLDMNGI+HPC+HPE++P P+ EDEM++A+
Sbjct: 22 LEETPQIVDGVALPIDYSSENPNG-ELDNLYLDMNGIVHPCSHPENRPPPETEDEMLLAV 80
Query: 87 FECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRAS 146
FE +R+ + RPRK+L +A+DGVAPRAKMNQ R+RRFR++
Sbjct: 81 FEYTNRVLNMARPRKVLMIAVDGVAPRAKMNQ-------------------QRARRFRSA 121
Query: 147 KETAEKIAEVARIREKLLAD----GCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYY 202
++ K A RE++L D G ++ ++ +DSN ITPGTPFM L+A L Y+
Sbjct: 122 RDA--KFENEA--REEILKDKEAAGQVIDEAVKQKKTWDSNAITPGTPFMDKLAAALRYW 177
Query: 203 IHDRLNNDPGWKGIKVILSDANVP 226
+L+ DPGWK ++VI+SDA VP
Sbjct: 178 TAFKLSTDPGWKNLQVIISDATVP 201
>gi|413924952|gb|AFW64884.1| hypothetical protein ZEAMMB73_783884 [Zea mays]
Length = 893
Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 101/189 (53%), Positives = 119/189 (62%), Gaps = 22/189 (11%)
Query: 40 PFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDE-DEMMVAIFECIDRLFRIVR 98
P+D PNG+ + NLYLDMN IIHPC HPED+ P DE+ A+FE IDRLFRIVR
Sbjct: 38 PWDEPAAGPNGV-YHNLYLDMNAIIHPCFHPEDEVCPPTTFDEVFAAMFEYIDRLFRIVR 96
Query: 99 PRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVAR 158
P KLLY+A+DGVAPRAKMNQ RSRRF+A+KE + E
Sbjct: 97 PTKLLYLAVDGVAPRAKMNQ-------------------QRSRRFKAAKEAKDAELEEKL 137
Query: 159 IREKLLADGC-ILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIK 217
+REK A+G + +E D N ITPGT FM LS L YY+ RLN+DPGWKGIK
Sbjct: 138 LREKFRAEGREVRARPRETHEVSDPNIITPGTEFMEKLSKALEYYVRSRLNSDPGWKGIK 197
Query: 218 VILSDANVP 226
VILSD+NVP
Sbjct: 198 VILSDSNVP 206
>gi|440466364|gb|ELQ35636.1| 5'-3' exoribonuclease 2 [Magnaporthe oryzae Y34]
gi|440487857|gb|ELQ67622.1| 5'-3' exoribonuclease 2 [Magnaporthe oryzae P131]
Length = 1041
Score = 184 bits (466), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 99/217 (45%), Positives = 125/217 (57%), Gaps = 44/217 (20%)
Query: 35 NGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLF 94
+G IP D +KPNPNG EFDNLYLDMNGI+HPC HPED+PAP+DE+EMM+ IF+ DR+F
Sbjct: 31 DGTSIPVDITKPNPNGEEFDNLYLDMNGIVHPCAHPEDRPAPQDEEEMMLEIFKYTDRVF 90
Query: 95 RIVRPRKLLYMAI---------------------DGVAPRAKMNQPLTVYSVLYDRGNYS 133
+VRPRK+L +A+ DGVAPRAKMNQ
Sbjct: 91 NMVRPRKVLMIAVGKDSKHYPKCELYINPIQPLLDGVAPRAKMNQ--------------- 135
Query: 134 TWQLMRSRRFRASKETAEKIAEVARIREKLL----ADGCILPPEKEKGSHFDSNCITPGT 189
RSRRFR+++E EK + + + L D E FD+N ITPGT
Sbjct: 136 ----QRSRRFRSAQEAKEKAEDKLELLKLLKQQKGGDVSAETLESVTKKAFDTNSITPGT 191
Query: 190 PFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
PFM L+ L Y+ +LN DPGW +K+I+SDA VP
Sbjct: 192 PFMDILAGSLRYWCAYKLNTDPGWANVKIIISDATVP 228
>gi|395330505|gb|EJF62888.1| 5'-3' exoribonuclease 2 [Dichomitus squalens LYAD-421 SS1]
Length = 1182
Score = 184 bits (466), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 101/196 (51%), Positives = 131/196 (66%), Gaps = 23/196 (11%)
Query: 33 EVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDR 92
E N +P + + PNPNG+EFD+LYLDMNGI+HPCTHPE KPAP+ E+EMM+ IF +R
Sbjct: 33 EGNEVAVPVNIADPNPNGVEFDSLYLDMNGIVHPCTHPEGKPAPETEEEMMIEIFSYTER 92
Query: 93 LFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEK 152
+ +VRPRKLL+MAIDGVAPRAKMNQ RSRRFR+++E EK
Sbjct: 93 VVNMVRPRKLLFMAIDGVAPRAKMNQ-------------------QRSRRFRSAQEAKEK 133
Query: 153 IAEVARIREKLL--ADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
E AR + A G L E++ +DSN ITPGTPFM L++ L Y++ ++N D
Sbjct: 134 --EEARKESIAMWEAMGKTLSEEEKNKKAWDSNAITPGTPFMDLLASSLRYWVVYKMNTD 191
Query: 211 PGWKGIKVILSDANVP 226
PGWK ++VI+SDA+VP
Sbjct: 192 PGWKDVQVIISDASVP 207
>gi|395510109|ref|XP_003759325.1| PREDICTED: 5'-3' exoribonuclease 2-like, partial [Sarcophilus
harrisii]
Length = 117
Score = 183 bits (465), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 93/135 (68%), Positives = 102/135 (75%), Gaps = 19/135 (14%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
P+E NG KIP D+SKPNPN +EFDNLYLDMNGIIHPCTHPEDKPAPK+EDEMMVAIFE I
Sbjct: 1 PKECNGVKIPVDTSKPNPNEVEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIFEYI 60
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
DRLF IVRPR+LLYMAIDGVAPRAKMNQ RSRRFRASKE
Sbjct: 61 DRLFNIVRPRRLLYMAIDGVAPRAKMNQ-------------------QRSRRFRASKEGM 101
Query: 151 EKIAEVARIREKLLA 165
E E R+RE++L+
Sbjct: 102 EATIEKQRVREEILS 116
>gi|171690192|ref|XP_001910021.1| hypothetical protein [Podospora anserina S mat+]
gi|170945044|emb|CAP71155.1| unnamed protein product [Podospora anserina S mat+]
Length = 1078
Score = 183 bits (465), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 104/213 (48%), Positives = 130/213 (61%), Gaps = 40/213 (18%)
Query: 35 NGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLF 94
+G IP D++KPNPNG EFDNLYLDMNGI+HPC+HPED+PAPKDE+EMMV IF+ DR+
Sbjct: 31 DGAVIPVDTTKPNPNGEEFDNLYLDMNGIVHPCSHPEDRPAPKDEEEMMVEIFKYTDRVV 90
Query: 95 RIVRPRKLLYMAI-----------------DGVAPRAKMNQPLTVYSVLYDRGNYSTWQL 137
+VRPRKLL +A+ DGVAPRAKMNQ
Sbjct: 91 NMVRPRKLLMIAVGMSNPSLDYQRQKLTRSDGVAPRAKMNQ------------------- 131
Query: 138 MRSRRFRASKETAEKIAEVARIREKLLAD----GCILPPEKEKGSHFDSNCITPGTPFMA 193
RSRRFRA+++ EK + ++ + L D + P E+ FDSN ITPGTPFM
Sbjct: 132 QRSRRFRAARDAKEKEEDKEKLLKMLQKDKKSTVQVQPVEEVVQKAFDSNSITPGTPFMD 191
Query: 194 CLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
L+A L Y+ +LN DP W IKVI+SDA +P
Sbjct: 192 ILAASLRYWCSYKLNTDPAWAKIKVIISDATIP 224
>gi|50293593|ref|XP_449208.1| hypothetical protein [Candida glabrata CBS 138]
gi|74608566|sp|Q6FKN6.3|XRN2_CANGA RecName: Full=5'-3' exoribonuclease 2
gi|49528521|emb|CAG62182.1| unnamed protein product [Candida glabrata]
Length = 1018
Score = 183 bits (465), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 96/210 (45%), Positives = 133/210 (63%), Gaps = 27/210 (12%)
Query: 21 PYSFASLVSLPQE-VNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDE 79
P + ++ PQ+ V+G +P D + PNPNG E DNLYLDMNGI+HPC+HPE+KP P+ E
Sbjct: 15 PKIISPVLEEPQQLVDGVALPIDYAGPNPNG-ELDNLYLDMNGIVHPCSHPENKPPPETE 73
Query: 80 DEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMR 139
D+M++A+FE +R+ + RPRK+L +A+DGVAPRAKMNQ R
Sbjct: 74 DDMLLAVFEYTNRVLNMARPRKVLVIAVDGVAPRAKMNQ-------------------QR 114
Query: 140 SRRFRASKETA---EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLS 196
SRRFR++++ E E+ R +E+L G I+ + +DSN ITPGTPFM L+
Sbjct: 115 SRRFRSARDAEIENEAREEIMRQKEQL---GQIIDDSVKNKKTWDSNAITPGTPFMDKLA 171
Query: 197 ACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
L Y+ +L DPGWK ++VI+SDA VP
Sbjct: 172 IALRYWTAFKLATDPGWKNLQVIISDATVP 201
>gi|242070071|ref|XP_002450312.1| hypothetical protein SORBIDRAFT_05g003580 [Sorghum bicolor]
gi|241936155|gb|EES09300.1| hypothetical protein SORBIDRAFT_05g003580 [Sorghum bicolor]
Length = 696
Score = 183 bits (465), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 100/180 (55%), Positives = 117/180 (65%), Gaps = 22/180 (12%)
Query: 48 PNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDE-DEMMVAIFECIDRLFRIVRPRKLLYMA 106
PNG+ + NLYLDMNGIIHPC HPED+ P DE+ A+F+ IDRLFRIVRP KLLY+A
Sbjct: 53 PNGV-YHNLYLDMNGIIHPCFHPEDQVYPPTTFDEVFAAMFDYIDRLFRIVRPTKLLYLA 111
Query: 107 IDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLAD 166
+DGVAPRAKMNQ RSRRF+A+K+ E E +REK A+
Sbjct: 112 VDGVAPRAKMNQ-------------------QRSRRFKAAKDAKEAELEEKLLREKFRAE 152
Query: 167 GCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
G + P +E D N ITPGT FM LS L YYI RLN+DPGWKGIK ILSD+NVP
Sbjct: 153 GREVQP-RETNEVSDPNVITPGTEFMEKLSKALEYYIRSRLNSDPGWKGIKAILSDSNVP 211
>gi|296423651|ref|XP_002841367.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637604|emb|CAZ85558.1| unnamed protein product [Tuber melanosporum]
Length = 883
Score = 182 bits (463), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 92/196 (46%), Positives = 125/196 (63%), Gaps = 20/196 (10%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
PQE++G D+++PNPNG E DNLYLDMNGI+HPC+HPE+ P E+ MM+A+F
Sbjct: 26 PQEIDGVVRAVDTTQPNPNG-ESDNLYLDMNGIVHPCSHPEEGEPPATEEAMMLAVFAYT 84
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
+R+ +VRP KLL +A+DGVAPRAKMNQ RSRRFR+++E
Sbjct: 85 ERVVNMVRPNKLLMIAVDGVAPRAKMNQ-------------------QRSRRFRSAQEAK 125
Query: 151 EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
EK E A++ E++ G + +DSN ITPGTPFM L+A L Y+I +LN+D
Sbjct: 126 EKEDETAQLIEQMEKHGSKFDDVIKNKKIWDSNAITPGTPFMDILAASLKYWIAKKLNDD 185
Query: 211 PGWKGIKVILSDANVP 226
P W +K+I+SD+ VP
Sbjct: 186 PAWAKLKIIISDSTVP 201
>gi|255717294|ref|XP_002554928.1| KLTH0F17116p [Lachancea thermotolerans]
gi|238936311|emb|CAR24491.1| KLTH0F17116p [Lachancea thermotolerans CBS 6340]
Length = 982
Score = 182 bits (463), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 92/200 (46%), Positives = 125/200 (62%), Gaps = 20/200 (10%)
Query: 27 LVSLPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAI 86
L PQ +G +P D + PNPNG E DNLYLDMNGI+HPC+HPE++P P+ EDEM++A+
Sbjct: 22 LEDTPQIEDGVALPIDYAGPNPNG-ELDNLYLDMNGIVHPCSHPENRPPPETEDEMLLAV 80
Query: 87 FECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRAS 146
FE +R+ + RPRK+L +A+DGVAPRAKMNQ R+RRFR++
Sbjct: 81 FEYTNRVLNMARPRKVLMIAVDGVAPRAKMNQ-------------------QRARRFRSA 121
Query: 147 KETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDR 206
++ + E R+ + G I+ +DSN ITPGTPFM L+A L Y+ +
Sbjct: 122 RDAQIQNEERERVLLEKEDMGEIIDDSVRNKKTWDSNAITPGTPFMDKLAAALRYWTSFK 181
Query: 207 LNNDPGWKGIKVILSDANVP 226
L DPGWK ++VI+SDA VP
Sbjct: 182 LATDPGWKNLQVIISDATVP 201
>gi|164658822|ref|XP_001730536.1| hypothetical protein MGL_2332 [Malassezia globosa CBS 7966]
gi|159104432|gb|EDP43322.1| hypothetical protein MGL_2332 [Malassezia globosa CBS 7966]
Length = 1133
Score = 182 bits (463), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 96/189 (50%), Positives = 122/189 (64%), Gaps = 22/189 (11%)
Query: 39 IPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVR 98
IP D S+PNPNG E+D LYLDMNGI+HPCTHPE KP P+ E++MM +F+ +R+ ++R
Sbjct: 11 IPVDISRPNPNGEEYDCLYLDMNGIVHPCTHPEGKPPPETEEDMMAEVFKYTERVINMIR 70
Query: 99 PRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVAR 158
PRKLL MAIDGVAPRAKMNQ RSRRFR++++ KI R
Sbjct: 71 PRKLLMMAIDGVAPRAKMNQ-------------------QRSRRFRSAQDA--KILHQQR 109
Query: 159 IREKLLADGCILPPEKEK-GSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIK 217
+E L E E+ +DSN ITPGTPFM L++ L Y+I +LN DPGWK +
Sbjct: 110 EQELEERKRKGLAGENERIEKSWDSNAITPGTPFMDLLASSLRYWIAHKLNTDPGWKNLC 169
Query: 218 VILSDANVP 226
V+LSDA+VP
Sbjct: 170 VVLSDASVP 178
>gi|343427909|emb|CBQ71434.1| related to dna exoribonuclease Dhp1p [Sporisorium reilianum SRZ2]
Length = 1251
Score = 182 bits (462), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 99/189 (52%), Positives = 125/189 (66%), Gaps = 20/189 (10%)
Query: 39 IPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVR 98
+P D+S PNPNG EFD LYLDMNGI+HPCTHPE KPAP+ E+EMMV +F +R+ +VR
Sbjct: 39 LPLDTSTPNPNGEEFDCLYLDMNGIVHPCTHPEGKPAPETEEEMMVEVFAYTERVVNMVR 98
Query: 99 PRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVAR 158
PR+LL MAIDGVAPRAKMNQ RSRRFRA+KE EK E
Sbjct: 99 PRRLLMMAIDGVAPRAKMNQ-------------------QRSRRFRAAKEAREKHEEKEA 139
Query: 159 IREKLLADGCILPPEK-EKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIK 217
+ A G + + + +DSN ITPGTPFM L+A L Y++ ++N+DPGWK ++
Sbjct: 140 ALAEWKAKGLPVTDDALQSKKAWDSNAITPGTPFMDLLAASLRYWVAQKINSDPGWKDVQ 199
Query: 218 VILSDANVP 226
VI+SDA+VP
Sbjct: 200 VIISDASVP 208
>gi|328865681|gb|EGG14067.1| 5'-3' exoribonuclease [Dictyostelium fasciculatum]
Length = 1157
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 94/203 (46%), Positives = 128/203 (63%), Gaps = 27/203 (13%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
P++ +G ++ D S+ N NG EFDNLYLDMNGIIHPC HPE P P++ +MM +I E +
Sbjct: 24 PRDSDGSRLKCDFSELNVNG-EFDNLYLDMNGIIHPCAHPEKGPKPRNTQDMMDSIVEYL 82
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
D LF I+RPRKL+YMAIDGVAPRAKMNQ R+RRFRA+ ++
Sbjct: 83 DLLFAIIRPRKLIYMAIDGVAPRAKMNQ-------------------QRARRFRAALDSR 123
Query: 151 EKIAEVARIREKLLADGCI-------LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYI 203
+ AR + L +G + + + + HFDSNCITPGT FMA ++ L Y+
Sbjct: 124 ITKEQAARDLIERLNNGSLSQEDYDAIQKDGAEKYHFDSNCITPGTEFMALVALTLRQYV 183
Query: 204 HDRLNNDPGWKGIKVILSDANVP 226
++++ DP WK +KVI+SDA+VP
Sbjct: 184 AEKISTDPAWKDVKVIISDASVP 206
>gi|66826105|ref|XP_646407.1| 5'-3' exoribonuclease [Dictyostelium discoideum AX4]
gi|60474374|gb|EAL72311.1| 5'-3' exoribonuclease [Dictyostelium discoideum AX4]
Length = 1190
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 97/204 (47%), Positives = 128/204 (62%), Gaps = 29/204 (14%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
P+E +G + D + PNPNG E+DNLYLDMNGIIHPC HPE P PK ++M+ +I+E +
Sbjct: 24 PREADGGRSVVDFTTPNPNG-EYDNLYLDMNGIIHPCAHPEKGPKPKSIEDMIQSIYEYL 82
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKET- 149
D LF I+RPRKL+YMA+DGVAPRAKMNQ R+RRFRA+ ++
Sbjct: 83 DLLFAIIRPRKLIYMAVDGVAPRAKMNQ-------------------QRTRRFRAALDSR 123
Query: 150 AEKIAEVARIREKLLADGCILP-------PEKEKGSHFDSNCITPGTPFMACLSACLHYY 202
+K E A RE++ DG EK+ FDSNCITPGT FM ++ L Y
Sbjct: 124 LDKDKEAALWRERIY-DGLATQQEYEQYMEEKKNKFKFDSNCITPGTLFMDRVAESLRTY 182
Query: 203 IHDRLNNDPGWKGIKVILSDANVP 226
+ ++L DP WK +K+I+SDA+VP
Sbjct: 183 VAEKLTTDPAWKDVKIIISDASVP 206
>gi|301111760|ref|XP_002904959.1| 5'-3' exoribonuclease, putative [Phytophthora infestans T30-4]
gi|262095289|gb|EEY53341.1| 5'-3' exoribonuclease, putative [Phytophthora infestans T30-4]
Length = 972
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 91/185 (49%), Positives = 120/185 (64%), Gaps = 21/185 (11%)
Query: 42 DSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRK 101
D++ P+PNG E DNLY+DMNG+IHPC HPE+ APK E+EM + +DRL VRPR+
Sbjct: 39 DTTGPSPNGFEVDNLYVDMNGLIHPCAHPENGEAPKTEEEMYRRVMAYVDRLVAAVRPRR 98
Query: 102 LLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIRE 161
+LY+AIDGVAPRAKMNQ R+RRFR+++E +++ E
Sbjct: 99 VLYLAIDGVAPRAKMNQ-------------------QRARRFRSAQEAEQRMEVEKEALE 139
Query: 162 KLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILS 221
+ A G +P ++EK +DSN ITPGT FMA L+ L +YI DR+NN+ WK IK+ILS
Sbjct: 140 YMSALGHKVPSKQEKP--WDSNVITPGTKFMAKLAKHLRFYIRDRVNNNAAWKSIKIILS 197
Query: 222 DANVP 226
DA VP
Sbjct: 198 DAGVP 202
>gi|50550657|ref|XP_502801.1| YALI0D13750p [Yarrowia lipolytica]
gi|74634562|sp|Q6C961.3|XRN2_YARLI RecName: Full=5'-3' exoribonuclease 2
gi|49648669|emb|CAG80989.1| YALI0D13750p [Yarrowia lipolytica CLIB122]
Length = 1010
Score = 181 bits (458), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 98/212 (46%), Positives = 128/212 (60%), Gaps = 41/212 (19%)
Query: 34 VNGQKIP-FDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDR 92
V+G++IP D S PNPNG E DNLYLDMNGI+HPCTHPE + AP EDEM++A+F+ +R
Sbjct: 29 VDGEEIPGSDYSAPNPNG-ELDNLYLDMNGIVHPCTHPEGEEAPPSEDEMLLAVFKYTER 87
Query: 93 LFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEK 152
+ + RPRK+L MAIDGVAPRAKMNQ R+RRFR++K+ A
Sbjct: 88 VLNVCRPRKVLMMAIDGVAPRAKMNQ-------------------QRARRFRSAKDAA-- 126
Query: 153 IAEVARIREKLLADGCILPPEKEKG------------------SHFDSNCITPGTPFMAC 194
I + + +L A L EKG +DSN ITPGTPFM
Sbjct: 127 IEAESTLESELKAKTIELQSSGEKGKSLETILDEFKQGLVNKPGKWDSNAITPGTPFMEK 186
Query: 195 LSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
L+A L Y++ +LN +PGW+ +KV++SDA VP
Sbjct: 187 LAAALRYWVGYKLNTEPGWRDLKVVISDATVP 218
>gi|255072731|ref|XP_002500040.1| predicted protein [Micromonas sp. RCC299]
gi|226515302|gb|ACO61298.1| predicted protein [Micromonas sp. RCC299]
Length = 249
Score = 181 bits (458), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 97/167 (58%), Positives = 117/167 (70%), Gaps = 20/167 (11%)
Query: 60 MNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQP 119
MNGIIHPC HPED+PAP E+E+ IF+ IDRLF ++RPRKLLYMAIDGVAPRAKMNQ
Sbjct: 1 MNGIIHPCFHPEDRPAPTTEEEVFECIFDYIDRLFAMIRPRKLLYMAIDGVAPRAKMNQ- 59
Query: 120 LTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSH 179
RSRRFRA++E EK E ++REKL +G +PP ++K
Sbjct: 60 ------------------QRSRRFRAAQEAKEKEEEDEKLREKLRREGVNVPP-RQKSEA 100
Query: 180 FDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
FDSN ITPGTPFM LSA L YY+H R+N DP W+G+KVI+SDA+VP
Sbjct: 101 FDSNVITPGTPFMGRLSAALQYYVHQRMNTDPAWRGVKVIMSDASVP 147
>gi|406603016|emb|CCH45428.1| 5'-3' exoribonuclease 2 [Wickerhamomyces ciferrii]
Length = 940
Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 89/193 (46%), Positives = 125/193 (64%), Gaps = 20/193 (10%)
Query: 34 VNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRL 93
V+G +P S PNPNG E DNLYLDMNGI+HPC+HPE++P P+ EDEM++A+FE DR+
Sbjct: 29 VDGVTVPPSYSNPNPNG-ELDNLYLDMNGIVHPCSHPENRPPPETEDEMLLAVFEYTDRV 87
Query: 94 FRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKI 153
+ RPRK+L +A+DGVAPRAKMNQ R+RRFR++++ +
Sbjct: 88 LNMARPRKVLMIAVDGVAPRAKMNQ-------------------QRARRFRSARDAKIQD 128
Query: 154 AEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGW 213
E R+++ G ++ + +DSN ITPGTPFM L+ L Y+ +L++DPGW
Sbjct: 129 EERQRLQDLREGYGEVIDEAVKVKKTWDSNAITPGTPFMDKLALALRYWTAYKLSSDPGW 188
Query: 214 KGIKVILSDANVP 226
K ++VI+SDA VP
Sbjct: 189 KDLQVIISDATVP 201
>gi|255565761|ref|XP_002523870.1| 5'->3' exoribonuclease, putative [Ricinus communis]
gi|223536958|gb|EEF38596.1| 5'->3' exoribonuclease, putative [Ricinus communis]
Length = 993
Score = 180 bits (457), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 100/191 (52%), Positives = 121/191 (63%), Gaps = 23/191 (12%)
Query: 38 KIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDE-DEMMVAIFECIDRLFRI 96
K P + PNPNG+EFDNLYLDMNGIIHPC HP+D P+P DE+ I++ ID +F I
Sbjct: 13 KYPNVITSPNPNGLEFDNLYLDMNGIIHPCFHPDDHPSPPTTFDEVFNNIYKYIDHIFSI 72
Query: 97 VRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEV 156
VRPR LLY+AIDGVAPRAKMNQ RSRRFR +K+T AE
Sbjct: 73 VRPRNLLYLAIDGVAPRAKMNQ-------------------QRSRRFRNAKDTEIAEAEE 113
Query: 157 ARIREKLLADG-CILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKG 215
R+R++ G +LP + + S DSN ITPGT FM LS L Y+ +N+DP WK
Sbjct: 114 ERLRKEYEIQGKQVLPKQYSEVS--DSNIITPGTEFMFTLSIKLQEYMISNINSDPAWKA 171
Query: 216 IKVILSDANVP 226
IKVILSDA+VP
Sbjct: 172 IKVILSDASVP 182
>gi|281202869|gb|EFA77071.1| 5'-3' exoribonuclease [Polysphondylium pallidum PN500]
Length = 1091
Score = 180 bits (457), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 94/203 (46%), Positives = 128/203 (63%), Gaps = 27/203 (13%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
P+ +G ++ D+S+PN NG EFDNLYLDMNGIIHPC HPE P P++ +MM +I E +
Sbjct: 24 PRHQDGSRVVCDNSEPNLNG-EFDNLYLDMNGIIHPCAHPEQGPKPRNTQDMMDSIMEYL 82
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
D +F IVRPR LLYMAIDGVAPRAKMNQ RSRRFR++ +
Sbjct: 83 DLVFAIVRPRNLLYMAIDGVAPRAKMNQ-------------------QRSRRFRSALDAR 123
Query: 151 EKIAEVARIREKLLADGCI-------LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYI 203
+ A+ + +A+G + L K++ HFDSNCITPGT FM ++ L Y+
Sbjct: 124 LTREKEAKELMENIANGKMSESEVEALQKAKDEKFHFDSNCITPGTMFMDLVALTLRSYV 183
Query: 204 HDRLNNDPGWKGIKVILSDANVP 226
++++ DP WK +KVI+SDA++P
Sbjct: 184 AEKVSTDPAWKNLKVIISDASIP 206
>gi|320584179|gb|EFW98390.1| 5'-3' exoribonuclease, putative [Ogataea parapolymorpha DL-1]
Length = 967
Score = 179 bits (454), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 96/188 (51%), Positives = 120/188 (63%), Gaps = 22/188 (11%)
Query: 40 PFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRP 99
P S PNPNG E DNLYLDMNGI+HPC+HPE+KP P+ E EMMV IF DR+ + RP
Sbjct: 35 PVQYSNPNPNG-ELDNLYLDMNGIVHPCSHPENKPPPETEAEMMVEIFRYTDRVLNMARP 93
Query: 100 RKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVAR- 158
RKLL +A+DGVAPRAKMNQ RSRRFR++++ A E+ R
Sbjct: 94 RKLLMIAVDGVAPRAKMNQ-------------------QRSRRFRSARDAALAQEELERQ 134
Query: 159 IREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKV 218
I+E+ + I K K S +DSN ITPGTPFM L+ L Y++ +L NDPGW ++V
Sbjct: 135 IQEREMRGEEIDLAIKGKKS-WDSNSITPGTPFMDILARSLRYWVAYKLANDPGWASLQV 193
Query: 219 ILSDANVP 226
I+SDA VP
Sbjct: 194 IISDATVP 201
>gi|393910763|gb|EJD76028.1| hypothetical protein LOAG_16951 [Loa loa]
Length = 159
Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 88/147 (59%), Positives = 105/147 (71%), Gaps = 19/147 (12%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
P+++NG +IP ++ PNPN EFDNLYLDMNGIIHPCTHPED+P+PK E+EM IFE I
Sbjct: 26 PRDMNGVRIPVNTVDPNPNFQEFDNLYLDMNGIIHPCTHPEDRPSPKTEEEMFTLIFEYI 85
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
DRLF IVRPRKLLYMAIDGVAPRAKMNQ RSRRFRASKE
Sbjct: 86 DRLFAIVRPRKLLYMAIDGVAPRAKMNQ-------------------QRSRRFRASKEAI 126
Query: 151 EKIAEVARIREKLLADGCILPPEKEKG 177
EK+ ++A R +L ++G LPPEK++
Sbjct: 127 EKVEQIAETRSRLESEGYPLPPEKKRS 153
>gi|385303464|gb|EIF47537.1| 5 -3 exoribonuclease 2 [Dekkera bruxellensis AWRI1499]
Length = 1025
Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 93/196 (47%), Positives = 124/196 (63%), Gaps = 20/196 (10%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
P V G + P D S NPNG E DNLYLDMNGI+HPC+HPE+KPAP+ EDEMM+A+FE
Sbjct: 26 PVIVGGIEQPLDYSAXNPNG-ELDNLYLDMNGIVHPCSHPENKPAPESEDEMMLAVFEYT 84
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
+R+ + RPRKLL +A+DGVAPRAKMNQ RSRRFR++++
Sbjct: 85 NRVLNMARPRKLLMIAVDGVAPRAKMNQ-------------------QRSRRFRSARDAE 125
Query: 151 EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
E R E++ G ++ +DSN ITPGTPFM L+ L +++ +L ND
Sbjct: 126 ISNEERERKMEEMEGRGEVIDESIRHKKTWDSNAITPGTPFMDILAESLRFWVAYKLAND 185
Query: 211 PGWKGIKVILSDANVP 226
PGW ++VI+SD++VP
Sbjct: 186 PGWSKLQVIISDSSVP 201
>gi|326471133|gb|EGD95142.1| 5'-3' exoribonuclease [Trichophyton tonsurans CBS 112818]
Length = 1066
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 98/231 (42%), Positives = 132/231 (57%), Gaps = 54/231 (23%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
PQE++GQ+IP D +KPNPNG E DNLYLDMNGI+HPCTHPE KP P +E EMM+ IF+
Sbjct: 26 PQEIDGQEIPVDITKPNPNGEEMDNLYLDMNGIVHPCTHPEGKPPPANEGEMMLEIFKYT 85
Query: 91 DRLFRIVRPRKLLYMAI-------------------------------DGVAPRAKMNQP 119
DR+ +VRPRK+L +A+ DGVAPRAKMNQ
Sbjct: 86 DRVVNMVRPRKVLMIAVVAKGSYSLSFSFPTGTYSFCDMFGTNVGFFLDGVAPRAKMNQ- 144
Query: 120 LTVYSVLYDRGNYSTWQLMRSRRFRASKETA---EKIAEVAR-IREKLLADGCILPPEKE 175
RSRRFR++++ EK E A+ ++++ + E+
Sbjct: 145 ------------------QRSRRFRSAQDAKAEDEKKVEFAKLLKKQKRGKKDVTVAEEV 186
Query: 176 KGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
+D+N ITPGTPFM L+ L Y++ +L+ DPGW+ +KVI+SDA VP
Sbjct: 187 ITKTWDTNVITPGTPFMDILALALRYWVAYKLSTDPGWEKLKVIISDATVP 237
>gi|213405427|ref|XP_002173485.1| 5'-3' exoribonuclease [Schizosaccharomyces japonicus yFS275]
gi|212001532|gb|EEB07192.1| 5'-3' exoribonuclease [Schizosaccharomyces japonicus yFS275]
Length = 963
Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 97/202 (48%), Positives = 130/202 (64%), Gaps = 22/202 (10%)
Query: 27 LVSLPQEV--NGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMV 84
++ +P +V +G + D ++PNPNG E DNLYLDMNGI+HPC+HPED+P P+ EDEMM+
Sbjct: 21 VIEVPSKVLPDGTEFGPDLAEPNPNG-ECDNLYLDMNGIVHPCSHPEDRPPPETEDEMML 79
Query: 85 AIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFR 144
A+FE DR+ +VRPR LL +AIDGVAPRAKMNQ RSRRFR
Sbjct: 80 AVFEYTDRILAMVRPRNLLMIAIDGVAPRAKMNQ-------------------QRSRRFR 120
Query: 145 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIH 204
+++E A+K A + + G + K +DSNCITPGTPFM L+ L YYI
Sbjct: 121 SAREAAQKAAALEECVREAKEKGIPVDENAAKKKAWDSNCITPGTPFMDILAKALRYYIT 180
Query: 205 DRLNNDPGWKGIKVILSDANVP 226
+LN +P +K ++ +LSDA+VP
Sbjct: 181 HKLNTEPAFKNLRFLLSDASVP 202
>gi|222447124|pdb|3FQD|A Chain A, Crystal Structure Of The S. Pombe Rat1-Rai1 Complex
Length = 899
Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 98/192 (51%), Positives = 124/192 (64%), Gaps = 19/192 (9%)
Query: 35 NGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLF 94
+G +I D S PNPNG+E DNLYLD NGI+HPC+HPED+PAP+ EDE VA+FE DR+
Sbjct: 34 DGTEIEPDLSLPNPNGVECDNLYLDXNGIVHPCSHPEDRPAPETEDEXXVAVFEYTDRIL 93
Query: 95 RIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIA 154
VRPR+LL++AIDGVAPRAK NQ RSRRFR+S+E A K
Sbjct: 94 AXVRPRQLLFIAIDGVAPRAKXNQ-------------------QRSRRFRSSREAALKEE 134
Query: 155 EVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWK 214
E+ E+ G + K +DSNCITPGTPF L+ L YYI ++LN+DP W+
Sbjct: 135 ELQAFIEEAKQQGIPIDENATKKKSWDSNCITPGTPFXDTLAKSLRYYIINKLNSDPCWR 194
Query: 215 GIKVILSDANVP 226
++ ILSDA+VP
Sbjct: 195 NVRFILSDASVP 206
>gi|50310793|ref|XP_455419.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74605300|sp|Q6CKX0.3|XRN2_KLULA RecName: Full=5'-3' exoribonuclease 2
gi|49644555|emb|CAG98127.1| KLLA0F07469p [Kluyveromyces lactis]
Length = 992
Score = 176 bits (446), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 90/195 (46%), Positives = 122/195 (62%), Gaps = 26/195 (13%)
Query: 35 NGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLF 94
+G ++P D S NPNG E DNLYLDMNGI+HPC+HPE+KP P+ EDEM++A+FE +R+
Sbjct: 30 DGVQLPLDYSSANPNG-ELDNLYLDMNGIVHPCSHPENKPPPETEDEMLLAVFEYTNRVL 88
Query: 95 RIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA---E 151
+ RPRK+L +A+DGVAPRAKMNQ R+RRFR++++ E
Sbjct: 89 NMARPRKVLMIAVDGVAPRAKMNQ-------------------QRARRFRSARDAKLQNE 129
Query: 152 KIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDP 211
+V R RE G + + +DSN ITPGTPFM L+ L Y+ +L DP
Sbjct: 130 AREQVLREREDY---GETIDENVKSKKTWDSNAITPGTPFMDKLATALRYWTSFKLATDP 186
Query: 212 GWKGIKVILSDANVP 226
GWK +++I+SDA VP
Sbjct: 187 GWKNLQIIISDATVP 201
>gi|328850703|gb|EGF99864.1| hypothetical protein MELLADRAFT_68240 [Melampsora larici-populina
98AG31]
Length = 406
Score = 176 bits (446), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 98/202 (48%), Positives = 124/202 (61%), Gaps = 27/202 (13%)
Query: 28 VSLPQEVNG--QKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVA 85
V + EV G ++ P D SK NPNG+EFD MNGI+HPCTHPE K P+ E+EMM+
Sbjct: 25 VPIRTEVEGGYEETPLDMSKRNPNGVEFD-----MNGIVHPCTHPEGKKPPETEEEMMIE 79
Query: 86 IFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRA 145
+F+ +R+ +VRPRKLL +AIDGVAPRAKMNQ RSRRFRA
Sbjct: 80 VFKYTERVVNMVRPRKLLMIAIDGVAPRAKMNQ-------------------QRSRRFRA 120
Query: 146 SKETAEK-IAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIH 204
++E K A++A I E + K +DSN ITPGTPFM L+ L Y+I
Sbjct: 121 AQEAQTKEEAKLAAIEEWKTMGKELSEEFKSDKKAWDSNAITPGTPFMTLLTESLRYWIV 180
Query: 205 DRLNNDPGWKGIKVILSDANVP 226
++N DPGWK I+VILSDA+VP
Sbjct: 181 HKMNTDPGWKQIQVILSDASVP 202
>gi|254571933|ref|XP_002493076.1| Nuclear 5' to 3' single-stranded RNA exonuclease, involved in RNA
metabolism [Komagataella pastoris GS115]
gi|238032874|emb|CAY70897.1| Nuclear 5' to 3' single-stranded RNA exonuclease, involved in RNA
metabolism [Komagataella pastoris GS115]
gi|328352909|emb|CCA39307.1| 5'-3' exoribonuclease 2 [Komagataella pastoris CBS 7435]
Length = 994
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 87/194 (44%), Positives = 121/194 (62%), Gaps = 20/194 (10%)
Query: 33 EVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDR 92
+++G+ P PNPNG E DNLYLDMNGI+HPC+HPE KP P+ EDEMM+ +F +
Sbjct: 28 DIDGESRPTRYEDPNPNG-ELDNLYLDMNGIVHPCSHPEHKPVPETEDEMMLDVFAYTEN 86
Query: 93 LFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEK 152
+ + RPRK++Y+A+DGVAPRAKMNQ RSRRFR++++ +
Sbjct: 87 VIMMARPRKVIYIAVDGVAPRAKMNQ-------------------QRSRRFRSAQDAKDA 127
Query: 153 IAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPG 212
+ A +++ G I+ + +DSN ITPGTPFM L+ L Y+ +L DPG
Sbjct: 128 NEKKAAELKEMEKKGEIIDDAIKNKKTWDSNAITPGTPFMHRLADSLRYWAAYKLTTDPG 187
Query: 213 WKGIKVILSDANVP 226
W GI+VI+SDA+VP
Sbjct: 188 WSGIEVIISDASVP 201
>gi|426198151|gb|EKV48077.1| hypothetical protein AGABI2DRAFT_191725, partial [Agaricus bisporus
var. bisporus H97]
Length = 315
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 98/189 (51%), Positives = 123/189 (65%), Gaps = 22/189 (11%)
Query: 39 IPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVR 98
+P + PNPNG+EFDNLYLDMNGI+HPCTHPE KPAP+ E+EMMV +F+ DR+ ++R
Sbjct: 39 VPVNMLLPNPNGVEFDNLYLDMNGIVHPCTHPEGKPAPETEEEMMVEVFKYTDRVVNMIR 98
Query: 99 PRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVAR 158
PRKLL+MAIDGVAPRAKMNQ RSRRFR+S + EK E AR
Sbjct: 99 PRKLLFMAIDGVAPRAKMNQ-------------------QRSRRFRSSHDAKEK--EDAR 137
Query: 159 IRE-KLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIK 217
K+ E+E +DSN ITPGTPFM L+ L Y++ ++N DP WK I+
Sbjct: 138 QESIKIWKAMGKEITEEEHKEAWDSNAITPGTPFMDLLATSLRYWVVQKMNTDPAWKNIQ 197
Query: 218 VILSDANVP 226
V++SDA VP
Sbjct: 198 VLISDAGVP 206
>gi|409080083|gb|EKM80444.1| hypothetical protein AGABI1DRAFT_113625, partial [Agaricus bisporus
var. burnettii JB137-S8]
Length = 315
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 98/189 (51%), Positives = 123/189 (65%), Gaps = 22/189 (11%)
Query: 39 IPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVR 98
+P + PNPNG+EFDNLYLDMNGI+HPCTHPE KPAP+ E+EMMV +F+ DR+ ++R
Sbjct: 39 VPVNMLLPNPNGVEFDNLYLDMNGIVHPCTHPEGKPAPETEEEMMVEVFKYTDRVVNMIR 98
Query: 99 PRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVAR 158
PRKLL+MAIDGVAPRAKMNQ RSRRFR+S + EK E AR
Sbjct: 99 PRKLLFMAIDGVAPRAKMNQ-------------------QRSRRFRSSHDAKEK--EDAR 137
Query: 159 IRE-KLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIK 217
K+ E+E +DSN ITPGTPFM L+ L Y++ ++N DP WK I+
Sbjct: 138 QESLKIWKAMGKEITEEEHKEAWDSNAITPGTPFMDLLATSLRYWVVQKMNTDPAWKNIQ 197
Query: 218 VILSDANVP 226
V++SDA VP
Sbjct: 198 VLISDAGVP 206
>gi|378727060|gb|EHY53519.1| 5'-3' exoribonculease Dhp1 [Exophiala dermatitidis NIH/UT8656]
Length = 1075
Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 94/197 (47%), Positives = 123/197 (62%), Gaps = 17/197 (8%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
P E++G + P D++KPNPNG E NLYLD NGI+HPC+HPE+KP P +E EMM+ IF+
Sbjct: 26 PYEIDGVQYPVDTTKPNPNGEEMHNLYLDFNGIVHPCSHPENKPPPANESEMMMEIFKYT 85
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
DR+ +VRPR+LL +AIDGVAPRAKMNQ R R R +KE
Sbjct: 86 DRVVNMVRPRRLLMIAIDGVAPRAKMNQQRA----------------RRFRAARDAKEAD 129
Query: 151 EKIAEVARIREKLLADGCILPPEKEK-GSHFDSNCITPGTPFMACLSACLHYYIHDRLNN 209
EK AE + + D + E+E +DSN ITPGTPFM L+ + Y++ +LN
Sbjct: 130 EKKAEFQTLLRQQQQDRDDVSDEEEVIKKTWDSNVITPGTPFMFILAQSIRYWVQWKLNT 189
Query: 210 DPGWKGIKVILSDANVP 226
DP W +KVI+SDA+VP
Sbjct: 190 DPAWAELKVIISDASVP 206
>gi|345789898|ref|XP_003433291.1| PREDICTED: 5'-3' exoribonuclease 2 [Canis lupus familiaris]
Length = 874
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 92/145 (63%), Positives = 100/145 (68%), Gaps = 20/145 (13%)
Query: 82 MMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSR 141
MMVAIFE IDRLF IVRPR+LLYMAIDGVAPRAKMNQ RSR
Sbjct: 1 MMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQ-------------------QRSR 41
Query: 142 RFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHY 201
RFRASKE E E R+RE++LA G LPPE+ K FDSNCITPGT FM L+ CL Y
Sbjct: 42 RFRASKEGMEAAVEKQRVREEILAKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRY 100
Query: 202 YIHDRLNNDPGWKGIKVILSDANVP 226
YI DRLNNDPGWK + VILSDA+ P
Sbjct: 101 YIADRLNNDPGWKNLTVILSDASAP 125
>gi|403218305|emb|CCK72796.1| hypothetical protein KNAG_0L01770 [Kazachstania naganishii CBS
8797]
Length = 1003
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 93/199 (46%), Positives = 121/199 (60%), Gaps = 26/199 (13%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
PQ V+G ++P D S N NG E DNLYLDMNGI+HPC+HPE+KP P+ EDEM++A+FE
Sbjct: 26 PQIVDGVELPIDYSTENANG-ELDNLYLDMNGIVHPCSHPENKPPPETEDEMLLAVFEYT 84
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
R+ + RPRK+L MA+DGVAPRAKMNQ R+RR +K+
Sbjct: 85 HRVLNMARPRKVLVMAVDGVAPRAKMNQ-------------------QRARRLGLAKDAE 125
Query: 151 ---EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRL 207
EK E R RE G ++ + +DSN ITPGTPFM L+ L Y+ +L
Sbjct: 126 LQNEKKEEELRKREHY---GEVIDDSVKAKKTWDSNAITPGTPFMDKLALALRYWTAFKL 182
Query: 208 NNDPGWKGIKVILSDANVP 226
DPGWK ++V++SDA VP
Sbjct: 183 ATDPGWKNLQVVISDATVP 201
>gi|296084855|emb|CBI28264.3| unnamed protein product [Vitis vinifera]
Length = 525
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 95/186 (51%), Positives = 117/186 (62%), Gaps = 21/186 (11%)
Query: 42 DSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDE-DEMMVAIFECIDRLFRIVRPR 100
+SS NPNG+EFDNLYLDMNGIIHPC HPED+ P +E+ ++E IDR+F IVRPR
Sbjct: 27 ESSSANPNGIEFDNLYLDMNGIIHPCFHPEDQIFPPTTFEEVFNNMYEYIDRIFSIVRPR 86
Query: 101 KLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIR 160
KLLYMAIDGVAPRAKMNQ R RRF+ +K+ AE R+R
Sbjct: 87 KLLYMAIDGVAPRAKMNQ-------------------QRRRRFQTAKDNEIAEAEEQRLR 127
Query: 161 EKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVIL 220
+ +G L P++E D N ITPGT FM +S L YI R+ ++ GWK +KVIL
Sbjct: 128 RQFEMEGKPLVPKQESQVS-DPNIITPGTVFMHEVSKALQQYICSRMKHEAGWKDLKVIL 186
Query: 221 SDANVP 226
SD+NVP
Sbjct: 187 SDSNVP 192
>gi|194382024|dbj|BAG64381.1| unnamed protein product [Homo sapiens]
Length = 874
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 92/145 (63%), Positives = 100/145 (68%), Gaps = 20/145 (13%)
Query: 82 MMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSR 141
MMVAIFE IDRLF IVRPR+LLYMAIDGVAPRAKMNQ RSR
Sbjct: 1 MMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQ-------------------QRSR 41
Query: 142 RFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHY 201
RFRASKE E E R+RE++LA G LPPE+ K FDSNCITPGT FM L+ CL Y
Sbjct: 42 RFRASKEGMEAAVEKQRVREEILAKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRY 100
Query: 202 YIHDRLNNDPGWKGIKVILSDANVP 226
YI DRLNNDPGWK + VILSDA+ P
Sbjct: 101 YIADRLNNDPGWKNLTVILSDASAP 125
>gi|332858058|ref|XP_001145394.2| PREDICTED: 5'-3' exoribonuclease 2 isoform 4 [Pan troglodytes]
gi|397478695|ref|XP_003810675.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 2 [Pan paniscus]
Length = 874
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 92/145 (63%), Positives = 100/145 (68%), Gaps = 20/145 (13%)
Query: 82 MMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSR 141
MMVAIFE IDRLF IVRPR+LLYMAIDGVAPRAKMNQ RSR
Sbjct: 1 MMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQ-------------------QRSR 41
Query: 142 RFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHY 201
RFRASKE E E R+RE++LA G LPPE+ K FDSNCITPGT FM L+ CL Y
Sbjct: 42 RFRASKEGMEAAVEKQRVREEILAKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRY 100
Query: 202 YIHDRLNNDPGWKGIKVILSDANVP 226
YI DRLNNDPGWK + VILSDA+ P
Sbjct: 101 YIADRLNNDPGWKNLTVILSDASAP 125
>gi|359479538|ref|XP_002272207.2| PREDICTED: 5'-3' exoribonuclease 3-like [Vitis vinifera]
Length = 1072
Score = 174 bits (441), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 95/186 (51%), Positives = 117/186 (62%), Gaps = 21/186 (11%)
Query: 42 DSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDE-DEMMVAIFECIDRLFRIVRPR 100
+SS NPNG+EFDNLYLDMNGIIHPC HPED+ P +E+ ++E IDR+F IVRPR
Sbjct: 27 ESSSANPNGIEFDNLYLDMNGIIHPCFHPEDQIFPPTTFEEVFNNMYEYIDRIFSIVRPR 86
Query: 101 KLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIR 160
KLLYMAIDGVAPRAKMNQ R RRF+ +K+ AE R+R
Sbjct: 87 KLLYMAIDGVAPRAKMNQ-------------------QRRRRFQTAKDNEIAEAEEQRLR 127
Query: 161 EKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVIL 220
+ +G L P++E D N ITPGT FM +S L YI R+ ++ GWK +KVIL
Sbjct: 128 RQFEMEGKPLVPKQESQVS-DPNIITPGTVFMHEVSKALQQYICSRMKHEAGWKDLKVIL 186
Query: 221 SDANVP 226
SD+NVP
Sbjct: 187 SDSNVP 192
>gi|338719282|ref|XP_001489345.3| PREDICTED: 5'-3' exoribonuclease 2 isoform 1 [Equus caballus]
Length = 874
Score = 174 bits (441), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 92/145 (63%), Positives = 100/145 (68%), Gaps = 20/145 (13%)
Query: 82 MMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSR 141
MMVAIFE IDRLF IVRPR+LLYMAIDGVAPRAKMNQ RSR
Sbjct: 1 MMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQ-------------------QRSR 41
Query: 142 RFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHY 201
RFRASKE E E R+RE++LA G LPPE+ K FDSNCITPGT FM L+ CL Y
Sbjct: 42 RFRASKEGMEAAVEKQRVREEILAKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRY 100
Query: 202 YIHDRLNNDPGWKGIKVILSDANVP 226
YI DRLNNDPGWK + VILSDA+ P
Sbjct: 101 YIADRLNNDPGWKNLTVILSDASAP 125
>gi|296200320|ref|XP_002747536.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 4 [Callithrix jacchus]
Length = 874
Score = 174 bits (441), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 92/145 (63%), Positives = 100/145 (68%), Gaps = 20/145 (13%)
Query: 82 MMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSR 141
MMVAIFE IDRLF IVRPR+LLYMAIDGVAPRAKMNQ RSR
Sbjct: 1 MMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQ-------------------QRSR 41
Query: 142 RFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHY 201
RFRASKE E E R+RE++LA G LPPE+ K FDSNCITPGT FM L+ CL Y
Sbjct: 42 RFRASKEGMEAAVEKQRVREEILAKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRY 100
Query: 202 YIHDRLNNDPGWKGIKVILSDANVP 226
YI DRLNNDPGWK + VILSDA+ P
Sbjct: 101 YIADRLNNDPGWKNLTVILSDASAP 125
>gi|403283599|ref|XP_003933202.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 2 [Saimiri boliviensis
boliviensis]
Length = 874
Score = 174 bits (441), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 92/145 (63%), Positives = 100/145 (68%), Gaps = 20/145 (13%)
Query: 82 MMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSR 141
MMVAIFE IDRLF IVRPR+LLYMAIDGVAPRAKMNQ RSR
Sbjct: 1 MMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQ-------------------QRSR 41
Query: 142 RFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHY 201
RFRASKE E E R+RE++LA G LPPE+ K FDSNCITPGT FM L+ CL Y
Sbjct: 42 RFRASKEGMEAAVEKQRVREEILAKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRY 100
Query: 202 YIHDRLNNDPGWKGIKVILSDANVP 226
YI DRLNNDPGWK + VILSDA+ P
Sbjct: 101 YIADRLNNDPGWKNLTVILSDASAP 125
>gi|402883355|ref|XP_003905185.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 3 [Papio anubis]
Length = 874
Score = 174 bits (441), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 92/145 (63%), Positives = 100/145 (68%), Gaps = 20/145 (13%)
Query: 82 MMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSR 141
MMVAIFE IDRLF IVRPR+LLYMAIDGVAPRAKMNQ RSR
Sbjct: 1 MMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQ-------------------QRSR 41
Query: 142 RFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHY 201
RFRASKE E E R+RE++LA G LPPE+ K FDSNCITPGT FM L+ CL Y
Sbjct: 42 RFRASKEGMEAAVEKQRVREEILAKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRY 100
Query: 202 YIHDRLNNDPGWKGIKVILSDANVP 226
YI DRLNNDPGWK + VILSDA+ P
Sbjct: 101 YIADRLNNDPGWKNLTVILSDASAP 125
>gi|332238208|ref|XP_003268295.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 3 [Nomascus leucogenys]
Length = 874
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 92/145 (63%), Positives = 100/145 (68%), Gaps = 20/145 (13%)
Query: 82 MMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSR 141
MMVAIFE IDRLF IVRPR+LLYMAIDGVAPRAKMNQ RSR
Sbjct: 1 MMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQ-------------------QRSR 41
Query: 142 RFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHY 201
RFRASKE E E R+RE++LA G LPPE+ K FDSNCITPGT FM L+ CL Y
Sbjct: 42 RFRASKEGMEAAVEKQRVREEILAKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRY 100
Query: 202 YIHDRLNNDPGWKGIKVILSDANVP 226
YI DRLNNDPGWK + VILSDA+ P
Sbjct: 101 YIADRLNNDPGWKNLTVILSDASAP 125
>gi|390354472|ref|XP_786402.3| PREDICTED: 5'-3' exoribonuclease 2-like [Strongylocentrotus
purpuratus]
Length = 803
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 93/195 (47%), Positives = 121/195 (62%), Gaps = 27/195 (13%)
Query: 32 QEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECID 91
+ V+G++IP ++++ NPNG+EFDNLYLDMN II PC +P +KPAP+++DE+M IF ID
Sbjct: 68 KHVDGKRIPVNTTQRNPNGVEFDNLYLDMNEIIVPCCYPSNKPAPQNDDEIMCEIFLNID 127
Query: 92 RLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAE 151
RL IVRPRKLLY+A DGVAPRAKM + MRS RF SK E
Sbjct: 128 RLVSIVRPRKLLYIAFDGVAPRAKMKK-------------------MRSSRFIGSKIRRE 168
Query: 152 KIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDP 211
+ R ++ G LPP++++ PG FM + YY+ +RLNNDP
Sbjct: 169 NREAQDKKRSEIEDSGRHLPPKRKE--------TYPGKGFMFRQAEYFRYYVTERLNNDP 220
Query: 212 GWKGIKVILSDANVP 226
GW+GIKVILSDAN P
Sbjct: 221 GWQGIKVILSDANTP 235
>gi|221502801|gb|EEE28515.1| 5'->3' exoribonuclease, putative [Toxoplasma gondii VEG]
Length = 1239
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 86/174 (49%), Positives = 113/174 (64%), Gaps = 22/174 (12%)
Query: 53 FDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAP 112
+D LYLDMNGIIHPC H +D P E+EM ++IF+ +DR+ I+RPR+LLY+AIDGVAP
Sbjct: 70 YDCLYLDMNGIIHPCCHTDDGSCPATEEEMFLSIFQYVDRIVDIIRPRQLLYLAIDGVAP 129
Query: 113 RAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCILPP 172
RAKMNQ RSRRF+A+K+ E+ A +R + ++G +PP
Sbjct: 130 RAKMNQ-------------------QRSRRFKAAKDIQEEEKAYAELRAQFESEGREVPP 170
Query: 173 EKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
+K + +DSN ITPGTPFM L+ L YYI DRL + WKG++VI SDA VP
Sbjct: 171 KKMR---WDSNVITPGTPFMHRLADALTYYIQDRLATNENWKGLRVIFSDATVP 221
>gi|237842105|ref|XP_002370350.1| exoribonuclease, putative [Toxoplasma gondii ME49]
gi|211968014|gb|EEB03210.1| exoribonuclease, putative [Toxoplasma gondii ME49]
Length = 1239
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 86/174 (49%), Positives = 113/174 (64%), Gaps = 22/174 (12%)
Query: 53 FDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAP 112
+D LYLDMNGIIHPC H +D P E+EM ++IF+ +DR+ I+RPR+LLY+AIDGVAP
Sbjct: 70 YDCLYLDMNGIIHPCCHTDDGSCPATEEEMFLSIFQYVDRIVDIIRPRQLLYLAIDGVAP 129
Query: 113 RAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCILPP 172
RAKMNQ RSRRF+A+K+ E+ A +R + ++G +PP
Sbjct: 130 RAKMNQ-------------------QRSRRFKAAKDIQEEEKAYAELRAQFESEGREVPP 170
Query: 173 EKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
+K + +DSN ITPGTPFM L+ L YYI DRL + WKG++VI SDA VP
Sbjct: 171 KKMR---WDSNVITPGTPFMHRLADALTYYIQDRLATNENWKGLRVIFSDATVP 221
>gi|221482303|gb|EEE20658.1| 5'->3' exoribonuclease, putative [Toxoplasma gondii GT1]
Length = 1239
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 86/174 (49%), Positives = 113/174 (64%), Gaps = 22/174 (12%)
Query: 53 FDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAP 112
+D LYLDMNGIIHPC H +D P E+EM ++IF+ +DR+ I+RPR+LLY+AIDGVAP
Sbjct: 70 YDCLYLDMNGIIHPCCHTDDGSCPATEEEMFLSIFQYVDRIVDIIRPRQLLYLAIDGVAP 129
Query: 113 RAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCILPP 172
RAKMNQ RSRRF+A+K+ E+ A +R + ++G +PP
Sbjct: 130 RAKMNQ-------------------QRSRRFKAAKDIQEEEKAYAELRAQFESEGREVPP 170
Query: 173 EKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
+K + +DSN ITPGTPFM L+ L YYI DRL + WKG++VI SDA VP
Sbjct: 171 KKMR---WDSNVITPGTPFMHRLADALTYYIQDRLATNENWKGLRVIFSDATVP 221
>gi|320586314|gb|EFW98993.1| RasGAP [Grosmannia clavigera kw1407]
Length = 3016
Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 93/177 (52%), Positives = 117/177 (66%), Gaps = 24/177 (13%)
Query: 31 PQEV-NGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFEC 89
PQ + +G IP D+S PNPNG EFDNLYLDMNGI+HPC+HPED+PAPKDE+EMM+ IF
Sbjct: 26 PQTMEDGTIIPVDTSGPNPNGEEFDNLYLDMNGIVHPCSHPEDRPAPKDEEEMMLEIFRY 85
Query: 90 IDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKET 149
DR+ +VRPRKLL +A+DGVAPRAKMNQ RSRRFR+++E
Sbjct: 86 TDRVVNMVRPRKLLMIAVDGVAPRAKMNQ-------------------QRSRRFRSAQEA 126
Query: 150 AEKIAEVARIREKLL-ADGCILPPEKEKGS---HFDSNCITPGTPFMACLSACLHYY 202
EK + + + L +G +LP E + + FDSN ITPGTPFM L+A L Y+
Sbjct: 127 QEKEEDKKELLKLLKQQNGGVLPTETLETAAKKAFDSNSITPGTPFMDILAASLRYW 183
>gi|336271881|ref|XP_003350698.1| hypothetical protein SMAC_02370 [Sordaria macrospora k-hell]
gi|380094860|emb|CCC07362.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 955
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 97/197 (49%), Positives = 118/197 (59%), Gaps = 34/197 (17%)
Query: 35 NGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLF 94
+G IP D +KPNPNG EFDNLYLDMNG PAPKDE+EMMV +F+ DR+
Sbjct: 31 DGTVIPVDCTKPNPNGEEFDNLYLDMNG----------PPAPKDEEEMMVEVFKYTDRVV 80
Query: 95 RIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIA 154
+VRPRKLL +A+DGVAPRAKMNQ RSRRFRA++E EK
Sbjct: 81 NMVRPRKLLMIAVDGVAPRAKMNQ-------------------QRSRRFRAAREAMEKEE 121
Query: 155 EVARIREKL-LADGCIL----PPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNN 209
+ + E L +G ++ P E FDSN ITPGTPFM L+A L Y+ +LN
Sbjct: 122 DKQKFVELLKKQNGNMIQQEEPVETVVKKAFDSNSITPGTPFMDILAASLKYWCSYKLNT 181
Query: 210 DPGWKGIKVILSDANVP 226
DP W +KVI+SDA VP
Sbjct: 182 DPAWANMKVIISDATVP 198
>gi|299747213|ref|XP_001836883.2| 5'-3' exoribonuclease 2 [Coprinopsis cinerea okayama7#130]
gi|298407417|gb|EAU84500.2| 5'-3' exoribonuclease 2 [Coprinopsis cinerea okayama7#130]
Length = 1156
Score = 170 bits (430), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 96/196 (48%), Positives = 124/196 (63%), Gaps = 36/196 (18%)
Query: 32 QEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECID 91
QEV IP + ++PNPNG+EFDNLYLDMNGI PAP+ E++MMV +F+ +
Sbjct: 51 QEVT---IPVNMAQPNPNGVEFDNLYLDMNGI----------PAPETEEDMMVEVFKYTE 97
Query: 92 RLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAE 151
R+ +VRPRKLL+MAIDGVAPRAKMNQ RSRRFR+++E E
Sbjct: 98 RVVNMVRPRKLLFMAIDGVAPRAKMNQ-------------------QRSRRFRSAQEAKE 138
Query: 152 KIAEVARIREKLL--ADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNN 209
K E AR L A G + E++ +DSN ITPGTPFM L+A L Y++ ++N
Sbjct: 139 K--EEARKEALALWEAMGKKVSDEEKTKQAWDSNAITPGTPFMDLLAASLRYWVVQKMNT 196
Query: 210 DPGWKGIKVILSDANV 225
DPGWK I+VI+SDA+V
Sbjct: 197 DPGWKNIQVIISDASV 212
>gi|358378678|gb|EHK16359.1| hypothetical protein TRIVIDRAFT_8924, partial [Trichoderma virens
Gv29-8]
Length = 189
Score = 169 bits (429), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 87/178 (48%), Positives = 112/178 (62%), Gaps = 23/178 (12%)
Query: 35 NGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLF 94
+G IP D+++PNPNG E DNLYLDMNGI+HPC+HPED+PAP DE+EMM+ +F DR+
Sbjct: 31 DGITIPVDTTQPNPNGEELDNLYLDMNGIVHPCSHPEDRPAPADEEEMMLEVFRYTDRVV 90
Query: 95 RIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIA 154
+VRPRK+L +A+DGVAPRAKMNQ RSRRFR+++E EK
Sbjct: 91 NMVRPRKILMIAVDGVAPRAKMNQ-------------------QRSRRFRSAREAQEKEE 131
Query: 155 EVARIREKL-LADGCILPP---EKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLN 208
+ + E L +G + P E FDSN ITPGTPFM L+ L Y+ +LN
Sbjct: 132 DKKALIELLKRQNGGVFPAADSETVVKKAFDSNSITPGTPFMDILALSLRYWCQYKLN 189
>gi|68466241|ref|XP_722895.1| hypothetical protein CaO19.12150 [Candida albicans SC5314]
gi|68466536|ref|XP_722750.1| hypothetical protein CaO19.4681 [Candida albicans SC5314]
gi|74656669|sp|Q5AMG5.3|XRN2_CANAL RecName: Full=5'-3' exoribonuclease 2
gi|46444743|gb|EAL04016.1| hypothetical protein CaO19.4681 [Candida albicans SC5314]
gi|46444898|gb|EAL04170.1| hypothetical protein CaO19.12150 [Candida albicans SC5314]
Length = 968
Score = 169 bits (429), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 90/196 (45%), Positives = 121/196 (61%), Gaps = 26/196 (13%)
Query: 32 QEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECID 91
E+ G K PNPNG E DNLYLDMNGI+HPC+HPE K P+ EDEM + IF+ D
Sbjct: 27 HEIGGAKY----ENPNPNG-EIDNLYLDMNGIVHPCSHPEHKKPPETEDEMFLDIFKYTD 81
Query: 92 RLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAE 151
R+ + RPRK+L +A+DGVAPRAKMNQ R+RRFRA+K+
Sbjct: 82 RVLMMARPRKVLMIAVDGVAPRAKMNQ-------------------QRARRFRAAKDAEL 122
Query: 152 KIAEVA-RIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
K ++ ++E+ L G I+ + +DSN ITPGTPFM L+ L Y++ +L++D
Sbjct: 123 KAKQLEIEVQERELR-GEIINDAIKGKKQWDSNAITPGTPFMDRLAEALRYWVAYKLSSD 181
Query: 211 PGWKGIKVILSDANVP 226
PGW ++VI+SDA VP
Sbjct: 182 PGWANLQVIISDATVP 197
>gi|325186843|emb|CCA21388.1| 5'3' exoribonuclease putative [Albugo laibachii Nc14]
Length = 1023
Score = 169 bits (428), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 87/183 (47%), Positives = 115/183 (62%), Gaps = 20/183 (10%)
Query: 44 SKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLL 103
+ PNPN +E NLY+DMNG+IHPC HPE+ PK E+EM + E +DRL VRPR++L
Sbjct: 48 TGPNPNELEVANLYIDMNGLIHPCAHPENGEQPKTEEEMYQRVMEYVDRLVAAVRPRRVL 107
Query: 104 YMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKL 163
Y+AIDGVAPRAKMNQ R+RRFR++KE E+ E +
Sbjct: 108 YLAIDGVAPRAKMNQ-------------------QRARRFRSAKEAEERGEIEKEAIEYM 148
Query: 164 LADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDA 223
A G + E+++ ++DSN ITPGT FM+ LS L +YI +R+N + WK IKVI SDA
Sbjct: 149 KAMGHQV-QEQDQSKNWDSNVITPGTKFMSKLSKYLRFYIRERINQNEAWKSIKVIFSDA 207
Query: 224 NVP 226
+VP
Sbjct: 208 SVP 210
>gi|241954112|ref|XP_002419777.1| 5'-3' exoribonuclease, putative [Candida dubliniensis CD36]
gi|223643118|emb|CAX41992.1| 5'-3' exoribonuclease, putative [Candida dubliniensis CD36]
Length = 978
Score = 169 bits (427), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 90/196 (45%), Positives = 121/196 (61%), Gaps = 26/196 (13%)
Query: 32 QEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECID 91
E+ G K PNPNG E DNLYLDMNGI+HPC+HPE K P+ EDEM + IF+ D
Sbjct: 27 HEIGGAKY----ENPNPNG-ETDNLYLDMNGIVHPCSHPEHKKPPETEDEMFLDIFKYTD 81
Query: 92 RLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAE 151
R+ + RPRK+L +A+DGVAPRAKMNQ R+RRFRA+K+
Sbjct: 82 RVLMMARPRKVLMIAVDGVAPRAKMNQ-------------------QRARRFRAAKDAEL 122
Query: 152 KIAEVA-RIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
K ++ ++E+ L G I+ + +DSN ITPGTPFM L+ L Y++ +L++D
Sbjct: 123 KAKQLEIEVKERELR-GEIINDAIKGKKQWDSNAITPGTPFMDRLAEALRYWVAYKLSSD 181
Query: 211 PGWKGIKVILSDANVP 226
PGW ++VI+SDA VP
Sbjct: 182 PGWANLQVIISDATVP 197
>gi|238881714|gb|EEQ45352.1| 5'-3' exoribonuclease 2 [Candida albicans WO-1]
Length = 968
Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 90/196 (45%), Positives = 121/196 (61%), Gaps = 26/196 (13%)
Query: 32 QEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECID 91
E+ G K PNPNG E DNLYLDMNGI+HPC+HPE K P+ EDEM + IF+ D
Sbjct: 27 HEIGGAKY----ENPNPNG-ETDNLYLDMNGIVHPCSHPEHKKPPETEDEMFLDIFKYTD 81
Query: 92 RLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAE 151
R+ + RPRK+L +A+DGVAPRAKMNQ R+RRFRA+K+
Sbjct: 82 RVLMMARPRKVLMIAVDGVAPRAKMNQ-------------------QRARRFRAAKDAEL 122
Query: 152 KIAEVA-RIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
K ++ ++E+ L G I+ + +DSN ITPGTPFM L+ L Y++ +L++D
Sbjct: 123 KAKQLEIEVQERELR-GEIINDAIKGKKQWDSNAITPGTPFMDRLAEALRYWVAYKLSSD 181
Query: 211 PGWKGIKVILSDANVP 226
PGW ++VI+SDA VP
Sbjct: 182 PGWANLQVIISDATVP 197
>gi|300176532|emb|CBK24197.2| unnamed protein product [Blastocystis hominis]
Length = 1028
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 93/195 (47%), Positives = 121/195 (62%), Gaps = 24/195 (12%)
Query: 34 VNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPE--DKPAPKDEDEMMVAIFECID 91
V+G IP D S PNPNG+EFDN Y+DMNGIIH C+H E DK P+ + +F +D
Sbjct: 29 VDGLYIPPDVSLPNPNGIEFDNFYIDMNGIIHNCSHNEGLDK-VPETSKDTFENMFMYLD 87
Query: 92 RLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAE 151
RLF IVRPRKL+Y+A+DGVAPRAKMNQ RSRRF A +E +
Sbjct: 88 RLFEIVRPRKLIYLAVDGVAPRAKMNQ-------------------QRSRRFSAFQERQD 128
Query: 152 KIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDP 211
+ IR ++LA G +PP + S FDSN ITPGT +M + L +YI DR++++P
Sbjct: 129 RKDAEDEIRSRMLAAGKKVPPPRT--SSFDSNKITPGTEYMMEICDNLRWYIADRMSHNP 186
Query: 212 GWKGIKVILSDANVP 226
W+ + VILSD +VP
Sbjct: 187 AWQNVTVILSDGSVP 201
>gi|255720663|ref|XP_002545266.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240135755|gb|EER35308.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 981
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 86/182 (47%), Positives = 117/182 (64%), Gaps = 22/182 (12%)
Query: 46 PNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYM 105
PNPNG E DNLYLDMNGI+HPC+HPE K AP+ EDEM + IF+ DR+ + RPRK+L +
Sbjct: 37 PNPNG-EIDNLYLDMNGIVHPCSHPEHKKAPETEDEMFLDIFKYTDRVLMMARPRKVLMI 95
Query: 106 AIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVA-RIREKLL 164
A+DGVAPRAKMNQ R+RRFRA+++ K ++ ++E+ +
Sbjct: 96 AVDGVAPRAKMNQ-------------------QRARRFRAAQDAKLKSHQLEIEVKEREM 136
Query: 165 ADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDAN 224
G ++ + +DSN ITPGTPFM L+ L Y++ +L NDPGW ++VI+SDA
Sbjct: 137 R-GEVIDDAIKGKKQWDSNAITPGTPFMDRLAEALRYWVAYKLANDPGWANLQVIISDAT 195
Query: 225 VP 226
VP
Sbjct: 196 VP 197
>gi|403331887|gb|EJY64917.1| 5'-3' exonuclease [Oxytricha trifallax]
Length = 1130
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 90/182 (49%), Positives = 109/182 (59%), Gaps = 23/182 (12%)
Query: 49 NGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAID 108
N EFDNLYLDMNGIIHPCTHP+DKP P E EM IF+ D++ +IVRP++L+YMA+D
Sbjct: 65 NNPEFDNLYLDMNGIIHPCTHPQDKPQPTSETEMFNNIFDYTDKIMKIVRPQRLIYMAVD 124
Query: 109 GVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGC 168
GVAPRAKMNQ RSRRFR + +T E+ IR K +G
Sbjct: 125 GVAPRAKMNQ-------------------QRSRRFRGALDTEEREQREEEIRGKWSKEGI 165
Query: 169 ILPPEKEK----GSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDAN 224
+K++ FD N ITPGT FM LS L YY+ +RL D WK IKVI SDA+
Sbjct: 166 KFSQKKDEEDGDSDKFDQNVITPGTEFMFRLSKALQYYVMERLQTDSLWKDIKVIFSDAS 225
Query: 225 VP 226
P
Sbjct: 226 NP 227
>gi|449019490|dbj|BAM82892.1| 5'->3' exoribonuclease [Cyanidioschyzon merolae strain 10D]
Length = 1363
Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 89/185 (48%), Positives = 117/185 (63%), Gaps = 21/185 (11%)
Query: 42 DSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRK 101
D S PNPNG EF NLY D+NG++H CTHPED+P P E++M +F +DR+ +VRPR+
Sbjct: 48 DVSLPNPNGEEFSNLYFDLNGVVHMCTHPEDRPPPATEEDMFQDVFRYMDRIVALVRPRR 107
Query: 102 LLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIRE 161
L+Y+AIDGVAPRAK+NQ R+RRFRA+KE EK E ++R
Sbjct: 108 LIYIAIDGVAPRAKINQ-------------------QRTRRFRAAKEAREKTEEEEKLRA 148
Query: 162 KLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILS 221
G +PP+ +K FDSN ITPGT FM L+ L YI +R+ + P W+ + VILS
Sbjct: 149 LWREQGLRVPPKPKKP--FDSNVITPGTLFMERLAVALRRYIRERIRSCPAWRSLVVILS 206
Query: 222 DANVP 226
DA+VP
Sbjct: 207 DASVP 211
>gi|327408309|emb|CCA30120.1| GF20490, related [Neospora caninum Liverpool]
Length = 1253
Score = 167 bits (422), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 92/212 (43%), Positives = 126/212 (59%), Gaps = 27/212 (12%)
Query: 16 RQDSKPYSFASLVSLPQEVNGQKIPFDSSKPN-PNGMEFDNLYLDMNGIIHPCTHPEDKP 74
RQ++K S S P N +K + +P+ +D LYLDMNGIIHPC H +D
Sbjct: 43 RQETKENEETSDRSAPAAENAEK----TDQPDLEEEFGYDCLYLDMNGIIHPCCHTDDGS 98
Query: 75 APKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYST 134
P E+EM ++IF+ +DR+ I++PRKLLY+AIDGVAPRAKMNQ
Sbjct: 99 CPATEEEMFLSIFQYVDRIVDIIQPRKLLYLAIDGVAPRAKMNQ---------------- 142
Query: 135 WQLMRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMAC 194
RSRRF+A+K+ E+ ++ + ++G +PP+K + +DSN ITPGTPFM
Sbjct: 143 ---QRSRRFKAAKDIQEEEKAYEELKAQFESEGREVPPKKIR---WDSNVITPGTPFMHR 196
Query: 195 LSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
L+ + YYI DRL W+G+KVI SDA VP
Sbjct: 197 LAIAITYYIQDRLATRSSWQGLKVIFSDATVP 228
>gi|224065931|ref|XP_002301985.1| predicted protein [Populus trichocarpa]
gi|222843711|gb|EEE81258.1| predicted protein [Populus trichocarpa]
Length = 851
Score = 166 bits (421), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 103/197 (52%), Positives = 123/197 (62%), Gaps = 32/197 (16%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
P + G KIP D+S+PNPN +E+DNLYLDMNGI+HPC HPED+P+P DE+ +F+ I
Sbjct: 26 PVVIEGVKIPVDTSRPNPNNIEYDNLYLDMNGIVHPCFHPEDRPSPTSFDEVFQCMFDYI 85
Query: 91 DRLFRIVRPRKLLYMAI-DGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKET 149
DRLF +VRPRKLLYMAI + +MNQ RSRRFRA+K+
Sbjct: 86 DRLFVVVRPRKLLYMAIGEWSCTSYEMNQ-------------------QRSRRFRAAKDA 126
Query: 150 AEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNN 209
A+ AE R+RE+ +G LPP KE FDSN ITPGT FMA L LN
Sbjct: 127 ADAAAEEERLREEFEREGRKLPP-KESSQTFDSNVITPGTEFMAVL-----------LNY 174
Query: 210 DPGWKGIKVILSDANVP 226
DPGWK IK ILSDANVP
Sbjct: 175 DPGWKKIKAILSDANVP 191
>gi|448107650|ref|XP_004205418.1| Piso0_003664 [Millerozyma farinosa CBS 7064]
gi|448110652|ref|XP_004201682.1| Piso0_003664 [Millerozyma farinosa CBS 7064]
gi|359382473|emb|CCE81310.1| Piso0_003664 [Millerozyma farinosa CBS 7064]
gi|359383238|emb|CCE80545.1| Piso0_003664 [Millerozyma farinosa CBS 7064]
Length = 993
Score = 166 bits (421), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 92/198 (46%), Positives = 121/198 (61%), Gaps = 26/198 (13%)
Query: 30 LPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFEC 89
L +E G + + PNPNG E DNLYLDMNGI+HPC+HPE KP P+ EDEM + +F+
Sbjct: 26 LDEEYGGSRY----TDPNPNG-EIDNLYLDMNGIVHPCSHPEHKPPPETEDEMFLDVFKY 80
Query: 90 IDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKET 149
DR+ + RPRK+L +A+DGVAPRAKMNQ RSRRFR++++
Sbjct: 81 TDRVLMMARPRKVLVIAVDGVAPRAKMNQ-------------------QRSRRFRSAQDA 121
Query: 150 AEKIAEVAR-IREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLN 208
E R I E+ L I K K S +DSN ITPGTPFM L+ L Y++ +L+
Sbjct: 122 KIAHEEKERQINERELRGEMIDEAIKGKKS-WDSNAITPGTPFMDRLALALRYWVAYKLS 180
Query: 209 NDPGWKGIKVILSDANVP 226
+PGW ++VI+SDA VP
Sbjct: 181 TEPGWANLQVIISDATVP 198
>gi|209877046|ref|XP_002139965.1| 5'-3' exoribonuclease [Cryptosporidium muris RN66]
gi|209555571|gb|EEA05616.1| 5'-3' exoribonuclease, putative [Cryptosporidium muris RN66]
Length = 1148
Score = 166 bits (420), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 89/185 (48%), Positives = 112/185 (60%), Gaps = 23/185 (12%)
Query: 42 DSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRK 101
D + P+ NG EFD LYLDMNGIIHPC +P AP +E EM + + IDRLF ++RPR+
Sbjct: 35 DLTLPSENG-EFDCLYLDMNGIIHPCCNPISSIAPINEAEMFTRVCDYIDRLFSMIRPRR 93
Query: 102 LLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIRE 161
LLY+AIDGVAPRAKMNQ RSRR++ S E + + ++
Sbjct: 94 LLYLAIDGVAPRAKMNQ-------------------QRSRRYKTSMEIENLMQAYSEAKQ 134
Query: 162 KLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILS 221
+ G PP KEK +DSN ITPGTPFM LSACL YI + ++P WK + VI S
Sbjct: 135 EFEKLGYKCPPYKEK---WDSNLITPGTPFMERLSACLQVYIRQKYESEPAWKTLSVIFS 191
Query: 222 DANVP 226
DAN+P
Sbjct: 192 DANIP 196
>gi|294657829|ref|XP_460123.2| DEHA2E18898p [Debaryomyces hansenii CBS767]
gi|218512153|sp|Q6BNU7.4|XRN2_DEBHA RecName: Full=5'-3' exoribonuclease 2
gi|199432980|emb|CAG88393.2| DEHA2E18898p [Debaryomyces hansenii CBS767]
Length = 1003
Score = 166 bits (419), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 90/184 (48%), Positives = 114/184 (61%), Gaps = 22/184 (11%)
Query: 44 SKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLL 103
S PNPNG E DNLYLDMNGI+HPC+HPE K P+ EDEM + +F+ DR+ + RPRK+L
Sbjct: 36 SDPNPNG-ELDNLYLDMNGIVHPCSHPEHKLPPETEDEMFLDVFKYTDRVLLMARPRKVL 94
Query: 104 YMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVAR-IREK 162
+A+DGVAPRAKMNQ RSRRFR++++ E R IRE+
Sbjct: 95 MIAVDGVAPRAKMNQ-------------------QRSRRFRSAQDAKIAHEEKERQIRER 135
Query: 163 LLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSD 222
I K K S +DSN ITPGTPFM L+ L Y++ +L DPGW ++VI+SD
Sbjct: 136 ESRGESIDDAIKGKKS-WDSNAITPGTPFMDSLAQALRYWVAYKLATDPGWANLQVIISD 194
Query: 223 ANVP 226
A VP
Sbjct: 195 ATVP 198
>gi|354547470|emb|CCE44204.1| hypothetical protein CPAR2_400060 [Candida parapsilosis]
Length = 966
Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 90/196 (45%), Positives = 119/196 (60%), Gaps = 26/196 (13%)
Query: 32 QEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECID 91
E+ G K PNPNG E DNLYLDMNGI+HPC+HPE K P+ EDEM + IF D
Sbjct: 27 HEIGGAKY----EDPNPNG-EIDNLYLDMNGIVHPCSHPEHKRPPETEDEMFLDIFTYTD 81
Query: 92 RLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAE 151
R+ + RPRK+L +A+DGVAPRAKMNQ R+RRFR++++
Sbjct: 82 RVLMMARPRKVLMIAVDGVAPRAKMNQ-------------------QRARRFRSAQDAKF 122
Query: 152 KIAEVAR-IREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
K + + IREK A G ++ + +DSN ITPGTPFM L+ L Y++ +L+ D
Sbjct: 123 KQMAIDKEIREK-EARGEMINDAIKGKKQWDSNAITPGTPFMDRLAEALRYWVAYKLSTD 181
Query: 211 PGWKGIKVILSDANVP 226
PGW ++VI+SDA VP
Sbjct: 182 PGWANLQVIISDATVP 197
>gi|448528644|ref|XP_003869739.1| Rat1 5'-->3' exoribonuclease [Candida orthopsilosis Co 90-125]
gi|380354093|emb|CCG23606.1| Rat1 5'-->3' exoribonuclease [Candida orthopsilosis]
Length = 964
Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 90/196 (45%), Positives = 119/196 (60%), Gaps = 26/196 (13%)
Query: 32 QEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECID 91
E+ G K PNPNG E DNLYLDMNGI+HPC+HPE K P+ EDEM + IF D
Sbjct: 27 HEIGGAKY----EDPNPNG-EIDNLYLDMNGIVHPCSHPEHKRPPETEDEMFLDIFTYTD 81
Query: 92 RLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAE 151
R+ + RPRK+L +A+DGVAPRAKMNQ R+RRFR++++
Sbjct: 82 RVLMMARPRKVLMIAVDGVAPRAKMNQ-------------------QRARRFRSAQDAKF 122
Query: 152 KIAEVAR-IREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
K + + IREK A G ++ + +DSN ITPGTPFM L+ L Y++ +L+ D
Sbjct: 123 KQMAIDKEIREK-EARGEMINDAVKGKKQWDSNAITPGTPFMDRLAEALRYWVAYKLSTD 181
Query: 211 PGWKGIKVILSDANVP 226
PGW ++VI+SDA VP
Sbjct: 182 PGWANLQVIISDATVP 197
>gi|149236630|ref|XP_001524192.1| 5'-3' exoribonuclease 2 [Lodderomyces elongisporus NRRL YB-4239]
gi|146451727|gb|EDK45983.1| 5'-3' exoribonuclease 2 [Lodderomyces elongisporus NRRL YB-4239]
Length = 1049
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 92/195 (47%), Positives = 117/195 (60%), Gaps = 26/195 (13%)
Query: 33 EVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDR 92
E+ G K PNPNG E DNLYLDMNGI+HPC+HPE K AP+ EDEM + IF DR
Sbjct: 28 EIGGAKY----EDPNPNG-EIDNLYLDMNGIVHPCSHPEHKKAPETEDEMFLDIFTYTDR 82
Query: 93 LFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEK 152
+ + RPRK+L +A+DGVAPRAKMNQ R+RRFR++++ K
Sbjct: 83 VLMMARPRKVLMIAVDGVAPRAKMNQ-------------------QRARRFRSAQDAKIK 123
Query: 153 IAEVAR-IREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDP 211
+A+ I +K I K K +DSN ITPGTPFM L+ L Y + +L NDP
Sbjct: 124 DEAIAKEIADKEFRGELIDNAVKVK-KLWDSNAITPGTPFMDRLAEALRYLVAYKLANDP 182
Query: 212 GWKGIKVILSDANVP 226
GW ++VI+SDA VP
Sbjct: 183 GWANLQVIISDATVP 197
>gi|167383239|ref|XP_001736453.1| 5'-3' exoribonuclease [Entamoeba dispar SAW760]
gi|165901153|gb|EDR27303.1| 5'-3' exoribonuclease, putative [Entamoeba dispar SAW760]
Length = 858
Score = 159 bits (402), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 90/188 (47%), Positives = 116/188 (61%), Gaps = 28/188 (14%)
Query: 42 DSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRK 101
D ++PN NG+E+DN Y+DMNG+IHPC HP+D+ A + ++MMV + +D L IVRPRK
Sbjct: 31 DLNEPNTNGVEYDNFYIDMNGLIHPCLHPQDRQAAESVEDMMVLLTRYLDYLIDIVRPRK 90
Query: 102 LLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASK--ETAE-KIAEVAR 158
LLY+A+DGVAPRAKMNQ RSRRF+++K E AE K AE R
Sbjct: 91 LLYLAVDGVAPRAKMNQ-------------------QRSRRFKSAKDAENAELKQAEENR 131
Query: 159 IREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKV 218
R K +G PE FDSNCITPGT FM+ +S L YI +R++ W + V
Sbjct: 132 NRAK---NGL---PEIPYVRPFDSNCITPGTEFMSVVSKTLKKYIKERMSQSSYWNKLVV 185
Query: 219 ILSDANVP 226
ILSD+ VP
Sbjct: 186 ILSDSGVP 193
>gi|183233323|ref|XP_001913842.1| 5'-3' exonuclease domain containing protein [Entamoeba histolytica
HM-1:IMSS]
gi|169801637|gb|EDS89385.1| 5'-3' exonuclease domain containing protein [Entamoeba histolytica
HM-1:IMSS]
Length = 869
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 82/185 (44%), Positives = 112/185 (60%), Gaps = 22/185 (11%)
Query: 42 DSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRK 101
D ++PN NG+E+DN Y+DMNG+IHPC HP+D+ +P+ ++MMV + +D + IVRPRK
Sbjct: 31 DLNEPNANGVEYDNFYIDMNGLIHPCFHPQDRQSPETIEDMMVLLTRYLDYIIDIVRPRK 90
Query: 102 LLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIRE 161
LLY+A+DGVAPRAKMNQ RSRRF+++K+ A +
Sbjct: 91 LLYLAVDGVAPRAKMNQ-------------------QRSRRFKSAKDAENAELRQAEDNK 131
Query: 162 KLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILS 221
K L +G PE DSNCITPGT FM+ +S L YI +R++ W + VILS
Sbjct: 132 KRLMNGL---PEVPYIKPLDSNCITPGTEFMSVVSKTLKRYIKERMSQSSYWNKLVVILS 188
Query: 222 DANVP 226
D+ VP
Sbjct: 189 DSGVP 193
>gi|449709403|gb|EMD48677.1| 5'3' exonuclease domain containing protein [Entamoeba histolytica
KU27]
Length = 869
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 82/185 (44%), Positives = 112/185 (60%), Gaps = 22/185 (11%)
Query: 42 DSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRK 101
D ++PN NG+E+DN Y+DMNG+IHPC HP+D+ +P+ ++MMV + +D + IVRPRK
Sbjct: 31 DLNEPNANGVEYDNFYIDMNGLIHPCFHPQDRQSPETIEDMMVLLTRYLDYIIDIVRPRK 90
Query: 102 LLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIRE 161
LLY+A+DGVAPRAKMNQ RSRRF+++K+ A +
Sbjct: 91 LLYLAVDGVAPRAKMNQ-------------------QRSRRFKSAKDAENAELRQAEDNK 131
Query: 162 KLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILS 221
K L +G PE DSNCITPGT FM+ +S L YI +R++ W + VILS
Sbjct: 132 KRLMNGL---PEVPYIKPLDSNCITPGTEFMSVVSKTLKRYIKERMSQSSYWNKLVVILS 188
Query: 222 DANVP 226
D+ VP
Sbjct: 189 DSGVP 193
>gi|429329440|gb|AFZ81199.1| 5'->3' exoribonuclease, putative [Babesia equi]
Length = 828
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 89/192 (46%), Positives = 114/192 (59%), Gaps = 23/192 (11%)
Query: 35 NGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLF 94
N + I D PNPNG EFDNLYLDMNGIIHPC HPE+ P+ E+ M IF+ IDR+F
Sbjct: 34 NIETIGVDLLSPNPNG-EFDNLYLDMNGIIHPCCHPENMEQPESEEVMFECIFDYIDRIF 92
Query: 95 RIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIA 154
IVRPRK++++AIDGVAPRAK+NQ RSRRF+++ + +
Sbjct: 93 YIVRPRKIMFLAIDGVAPRAKINQ-------------------QRSRRFKSAADADLEDE 133
Query: 155 EVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWK 214
++ E+ +P K+K +DSN ITPGTPFM LS + YI DR+ WK
Sbjct: 134 VYNKLVEEFGKKKGDIPIRKDK---WDSNVITPGTPFMHELSKRIVDYIQDRIEKYDAWK 190
Query: 215 GIKVILSDANVP 226
I VI SD+ VP
Sbjct: 191 RITVIFSDSGVP 202
>gi|66359900|ref|XP_627128.1| Rat1 Kar1/Rat1 like 5'-3' exonuclease [Cryptosporidium parvum Iowa
II]
gi|46228551|gb|EAK89421.1| Rat1 Kar1/Rat1 like 5'-3' exonuclease [Cryptosporidium parvum Iowa
II]
Length = 1350
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 86/186 (46%), Positives = 107/186 (57%), Gaps = 23/186 (12%)
Query: 41 FDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPR 100
D ++PN NG EFD LYLDMNGIIHPC +P PKDE EM + + IDRL+ +V+PR
Sbjct: 34 LDLTEPNING-EFDCLYLDMNGIIHPCCNPSGGDKPKDEAEMFTRVCDYIDRLYAMVKPR 92
Query: 101 KLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIR 160
+L+YMAIDGVAPRAKMNQ RSRR++ + E +
Sbjct: 93 RLIYMAIDGVAPRAKMNQ-------------------QRSRRYKTALEMDYNRRAYEIAQ 133
Query: 161 EKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVIL 220
E+ G P EK +DSN ITPGTPFM L+ CLH YI + D W+ I VI
Sbjct: 134 EEFSKIGYKCPEYVEK---WDSNVITPGTPFMERLTMCLHAYIRRKFETDESWRSISVIF 190
Query: 221 SDANVP 226
SD+N+P
Sbjct: 191 SDSNIP 196
>gi|440293121|gb|ELP86283.1| 5'->3' exoribonuclease, putative [Entamoeba invadens IP1]
Length = 782
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 82/185 (44%), Positives = 111/185 (60%), Gaps = 22/185 (11%)
Query: 42 DSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRK 101
D PN NG E DN YLDMNG+IHPC HP+D+PAP D+M++ + +D + IVRPRK
Sbjct: 12 DLDSPNLNGFEIDNFYLDMNGLIHPCFHPQDRPAPDTIDDMLIMLKRYLDYIIDIVRPRK 71
Query: 102 LLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIRE 161
L+YMA+DGVAPRAKMNQ R+RRF+A+++ + A+
Sbjct: 72 LVYMAVDGVAPRAKMNQ-------------------QRARRFKAARDKKSAMDFEAQQAA 112
Query: 162 KLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILS 221
LA G LP K++ DSNCITPGT FM + L Y+ +R++ WK + VI+S
Sbjct: 113 DALAKGTPLPASKKE---MDSNCITPGTVFMDRVIETLKAYVKERISTSAYWKKLVVIIS 169
Query: 222 DANVP 226
D++VP
Sbjct: 170 DSSVP 174
>gi|167376304|ref|XP_001733946.1| 5'-3' exoribonuclease [Entamoeba dispar SAW760]
gi|165904779|gb|EDR29935.1| 5'-3' exoribonuclease, putative [Entamoeba dispar SAW760]
Length = 889
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 82/185 (44%), Positives = 112/185 (60%), Gaps = 22/185 (11%)
Query: 42 DSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRK 101
D ++PN NG+E+DN Y+DMNG+IHPC HP+D+ +P+ ++MMV + +D L IVRPRK
Sbjct: 31 DLNEPNFNGVEYDNFYIDMNGLIHPCFHPQDRQSPETIEDMMVMLGRYLDYLIDIVRPRK 90
Query: 102 LLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIRE 161
LLY+A+DGVAPRAKMNQ RSRRF+++KE + + A
Sbjct: 91 LLYLAVDGVAPRAKMNQ-------------------QRSRRFKSAKEVDDNERKQAEENR 131
Query: 162 KLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILS 221
+ +G PE DSNCITPGT FM+ +S L YI +R++ W + VILS
Sbjct: 132 NRVMNGL---PEIPYVRPLDSNCITPGTEFMSAVSKALKKYIKERMSQSSYWNKLVVILS 188
Query: 222 DANVP 226
D+ VP
Sbjct: 189 DSGVP 193
>gi|71005096|ref|XP_757214.1| hypothetical protein UM01067.1 [Ustilago maydis 521]
gi|46096576|gb|EAK81809.1| hypothetical protein UM01067.1 [Ustilago maydis 521]
Length = 1478
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 83/177 (46%), Positives = 107/177 (60%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+HP D A E ++ +A+F I+ LF ++PRK+ ++A+DG
Sbjct: 28 EFDNLYLDMNGIIHNCSHPNDNDASFRITETQIFLAVFAYIEHLFNKIKPRKVFFLAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ RSRRFR +KE E I+EK + G +
Sbjct: 88 VAPRAKMNQ-------------------QRSRRFRTAKEAKE-------IKEKAESRGEV 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP E+ FDSNCITPGTPFMA LS L Y+I ++ D W+ ++VILS +VP
Sbjct: 122 LPEEEA----FDSNCITPGTPFMAKLSQQLEYFIAKKITEDADWRNVQVILSGHDVP 174
>gi|58267550|ref|XP_570931.1| Exonuclease II [Cryptococcus neoformans var. neoformans JEC21]
gi|57227165|gb|AAW43624.1| Exonuclease II, putative [Cryptococcus neoformans var. neoformans
JEC21]
Length = 1457
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 91/195 (46%), Positives = 116/195 (59%), Gaps = 35/195 (17%)
Query: 37 QKIPFDSSKPNPNGM-EFDNLYLDMNGIIHPCTHP---EDKPAPK-DEDEMMVAIFECID 91
++ P S PN + FDNLYLDMNGIIH C+HP E+ P + E++M++AIF ID
Sbjct: 12 ERYPLTSQLITPNSIPTFDNLYLDMNGIIHNCSHPPSTENDPHFRITEEQMILAIFAYID 71
Query: 92 RLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAE 151
LF ++P+K+ +MAIDGVAPRAKMNQ RSRRFRA K+ +
Sbjct: 72 HLFTKIKPQKVFFMAIDGVAPRAKMNQ-------------------QRSRRFRAGKDARD 112
Query: 152 KIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDP 211
+ REK +G LP EK FDSN ITPGTPFMA LS L YY+ R++ D
Sbjct: 113 Q-------REKAEKNGEKLPDEKA----FDSNAITPGTPFMARLSQHLKYYVRKRISEDA 161
Query: 212 GWKGIKVILSDANVP 226
W+ I+VILS +VP
Sbjct: 162 DWRSIRVILSGHDVP 176
>gi|134112225|ref|XP_775088.1| hypothetical protein CNBE3620 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257740|gb|EAL20441.1| hypothetical protein CNBE3620 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 1473
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 91/195 (46%), Positives = 116/195 (59%), Gaps = 35/195 (17%)
Query: 37 QKIPFDSSKPNPNGM-EFDNLYLDMNGIIHPCTHP---EDKPAPK-DEDEMMVAIFECID 91
++ P S PN + FDNLYLDMNGIIH C+HP E+ P + E++M++AIF ID
Sbjct: 12 ERYPLTSQLITPNSIPTFDNLYLDMNGIIHNCSHPPSTENDPHFRITEEQMILAIFAYID 71
Query: 92 RLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAE 151
LF ++P+K+ +MAIDGVAPRAKMNQ RSRRFRA K+ +
Sbjct: 72 HLFTKIKPQKVFFMAIDGVAPRAKMNQ-------------------QRSRRFRAGKDARD 112
Query: 152 KIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDP 211
+ REK +G LP EK FDSN ITPGTPFMA LS L YY+ R++ D
Sbjct: 113 Q-------REKAEKNGEKLPDEKA----FDSNAITPGTPFMARLSQHLKYYVRKRISEDA 161
Query: 212 GWKGIKVILSDANVP 226
W+ I+VILS +VP
Sbjct: 162 DWRSIRVILSGHDVP 176
>gi|440792890|gb|ELR14098.1| zinc knuckle domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 862
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 89/181 (49%), Positives = 108/181 (59%), Gaps = 27/181 (14%)
Query: 46 PNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYM 105
PNPNGMEFD+L+LDMNGIIH THPED PAP+ E+ MM +F I+RL IVRPRKLLY+
Sbjct: 38 PNPNGMEFDSLFLDMNGIIHRATHPEDGPAPESEEAMMEVMFAFIERLVNIVRPRKLLYI 97
Query: 106 AIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLA 165
IDGVAPRAKMNQ RSRRF A+K E+ A+ + A
Sbjct: 98 GIDGVAPRAKMNQ-------------------QRSRRFLAAKHRLEEEAKA----KAEPA 134
Query: 166 DGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANV 225
DG P + FD N ITPGT FMA + L + +++ DP W + VILSD+ V
Sbjct: 135 DGGKQPAKPI----FDHNVITPGTEFMARAAEALRAHFARKISADPNWSPLAVILSDSCV 190
Query: 226 P 226
P
Sbjct: 191 P 191
>gi|321259283|ref|XP_003194362.1| 5'-3' exonuclease involved in mRNA decay; Kem1p [Cryptococcus
gattii WM276]
gi|317460833|gb|ADV22575.1| 5'-3' exonuclease involved in mRNA decay, putative; Kem1p
[Cryptococcus gattii WM276]
Length = 1456
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 91/195 (46%), Positives = 116/195 (59%), Gaps = 35/195 (17%)
Query: 37 QKIPFDSSKPNPNGM-EFDNLYLDMNGIIHPCTHP---EDKPAPK-DEDEMMVAIFECID 91
++ P S PN + FDNLYLDMNGIIH C+HP E+ P + E++M++AIF ID
Sbjct: 12 ERYPLTSQLITPNSIPTFDNLYLDMNGIIHNCSHPPSSENDPHFRITEEQMILAIFAYID 71
Query: 92 RLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAE 151
LF ++P+K+ +MAIDGVAPRAKMNQ RSRRFRA K+ +
Sbjct: 72 HLFTKIKPQKVFFMAIDGVAPRAKMNQ-------------------QRSRRFRAGKDARD 112
Query: 152 KIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDP 211
+ REK +G LP EK FDSN ITPGTPFMA LS L YY+ R++ D
Sbjct: 113 Q-------REKAEKNGEKLPDEKA----FDSNAITPGTPFMARLSQHLKYYVRKRISEDA 161
Query: 212 GWKGIKVILSDANVP 226
W+ I+VILS +VP
Sbjct: 162 DWRNIRVILSGHDVP 176
>gi|407040013|gb|EKE39937.1| 5'-3' exonuclease domain containing protein [Entamoeba nuttalli
P19]
Length = 560
Score = 156 bits (394), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 81/185 (43%), Positives = 112/185 (60%), Gaps = 22/185 (11%)
Query: 42 DSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRK 101
D ++PN +G+E+DN Y+DMNG+IHPC HP+D+ +P+ ++MMV + +D + IVRPRK
Sbjct: 31 DLNEPNASGVEYDNFYIDMNGLIHPCFHPQDRQSPEKIEDMMVLLTRYLDYIIDIVRPRK 90
Query: 102 LLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIRE 161
LLY+A+DGVAPRAKMNQ RSRRF+++K+ A +
Sbjct: 91 LLYLAVDGVAPRAKMNQ-------------------QRSRRFKSAKDAENAELRQAEDNK 131
Query: 162 KLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILS 221
K L +G PE DSNCITPGT FM+ +S L YI +R++ W + VILS
Sbjct: 132 KRLMNGL---PEVPYVKPLDSNCITPGTEFMSVVSKTLKKYIKERMSQSSYWNKLVVILS 188
Query: 222 DANVP 226
D+ VP
Sbjct: 189 DSGVP 193
>gi|145505349|ref|XP_001438641.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124405813|emb|CAK71244.1| unnamed protein product [Paramecium tetraurelia]
Length = 773
Score = 156 bits (394), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 85/183 (46%), Positives = 112/183 (61%), Gaps = 26/183 (14%)
Query: 49 NGMEFDNLYLDMNGIIHPCTHPEDK--PAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMA 106
N + DNLYLDMNGIIHPC+HP+ P P D+M V +F IDRL IVRP++L+YMA
Sbjct: 32 NNPDIDNLYLDMNGIIHPCSHPDQGGIPIPVTYDDMFVNVFHYIDRLVDIVRPKELIYMA 91
Query: 107 IDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLAD 166
IDGVAPRAK+NQ RSRRFRA++E+ E R+R+
Sbjct: 92 IDGVAPRAKLNQ-------------------QRSRRFRAAQESIRIQKEKERLRDYWRTQ 132
Query: 167 GC---ILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDA 223
G L EK +FDSN ITPGT FM L+ L YYI+DR+NN+P ++ + +I +D+
Sbjct: 133 GLNSDALNTYIEK--NFDSNQITPGTEFMQKLNIALQYYIYDRMNNNPLFRNVLIIFNDS 190
Query: 224 NVP 226
++P
Sbjct: 191 SIP 193
>gi|289577074|ref|NP_957327.2| 5'-3' exoribonuclease 1 [Danio rerio]
Length = 1697
Score = 156 bits (394), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 83/177 (46%), Positives = 106/177 (59%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHP--EDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+HP ED E+++ IF ++ LFRI++PRK+ +MA+DG
Sbjct: 28 EFDNLYLDMNGIIHQCSHPNDEDVHFRISEEKIFADIFHYLEVLFRIIKPRKVFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R RRFR++KE EKI +K L G +
Sbjct: 88 VAPRAKMNQ-------------------QRGRRFRSAKEAEEKI-------KKALEKGEV 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP E + FDSNCITPGT FMA L L Y++H++L+ D W+G+ V LS P
Sbjct: 122 LPTE----ARFDSNCITPGTDFMARLQEQLKYFVHNKLSTDKTWQGVNVYLSGHETP 174
>gi|218185281|gb|EEC67708.1| hypothetical protein OsI_35184 [Oryza sativa Indica Group]
Length = 944
Score = 155 bits (393), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 87/181 (48%), Positives = 108/181 (59%), Gaps = 26/181 (14%)
Query: 53 FDNLYLDMNGIIHPCTHPEDK-----PAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAI 107
+ NLYLDMNGIIHPC HP+D+ P P +E+ ++F+ +DRL RIVRP LLY+A+
Sbjct: 41 YHNLYLDMNGIIHPCFHPQDQVCPPSPVPTTLEEVFHSMFDYMDRLIRIVRPTSLLYLAV 100
Query: 108 DGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADG 167
DGVAPRAKMNQ R+RRF+++ + E +R++ A+G
Sbjct: 101 DGVAPRAKMNQ-------------------QRARRFKSAMPAKQAEVEENILRDRFRAEG 141
Query: 168 C-ILPPEKEKGSHF-DSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANV 225
+LP E S D N ITPGT FM LS L YYI LNNDP WK I VILSDANV
Sbjct: 142 KKVLPQETSSSSEVSDPNVITPGTEFMDKLSDALKYYIRAHLNNDPLWKDINVILSDANV 201
Query: 226 P 226
P
Sbjct: 202 P 202
>gi|443895364|dbj|GAC72710.1| predicted hydrolases or acyltransferases [Pseudozyma antarctica
T-34]
Length = 1939
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 83/177 (46%), Positives = 106/177 (59%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+HP D A E ++ +A+F I+ LF ++P+K+ ++A+DG
Sbjct: 177 EFDNLYLDMNGIIHNCSHPNDNDASFRITETQIFLAVFAYIEHLFHKIKPKKVFFLAVDG 236
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ RSRRFR +KE E I+EK G I
Sbjct: 237 VAPRAKMNQ-------------------QRSRRFRTAKEAKE-------IKEKAERRGEI 270
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP E+ FDSNCITPGTPFMA LS L Y+I ++ D W+ ++VILS +VP
Sbjct: 271 LPDEEA----FDSNCITPGTPFMAKLSQQLEYFIAKKITEDADWRNVQVILSGHDVP 323
>gi|348531416|ref|XP_003453205.1| PREDICTED: 5'-3' exoribonuclease 1 [Oreochromis niloticus]
Length = 1692
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 83/177 (46%), Positives = 106/177 (59%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHP--EDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDN YLDMNGIIH C+HP ED E+++ IF ++ LFRI++PRK+ +MA+DG
Sbjct: 28 EFDNFYLDMNGIIHQCSHPNDEDVHFRISEEKIFADIFHYLEVLFRIIKPRKVFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R RRFR++KE EKI +K L G +
Sbjct: 88 VAPRAKMNQ-------------------QRGRRFRSAKEAEEKI-------KKALDKGEV 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP E + FDSNCITPGT FMA L L Y++H++L+ND W+ +KV LS P
Sbjct: 122 LPTE----ARFDSNCITPGTEFMARLQEQLKYFVHNKLSNDKLWQNVKVYLSGHETP 174
>gi|183235666|ref|XP_657072.2| 5'-3' exonuclease domain containing protein [Entamoeba histolytica
HM-1:IMSS]
gi|169800426|gb|EAL51687.2| 5'-3' exonuclease domain containing protein [Entamoeba histolytica
HM-1:IMSS]
gi|449701673|gb|EMD42445.1| 5'3' exonuclease domain containing protein [Entamoeba histolytica
KU27]
Length = 937
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 81/185 (43%), Positives = 111/185 (60%), Gaps = 22/185 (11%)
Query: 42 DSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRK 101
D ++PN NG+E+DN Y+DMNG+IHPC HP+D+ +P+ ++MMV + +D L IVRPRK
Sbjct: 61 DLNEPNFNGVEYDNFYIDMNGLIHPCFHPQDRQSPETIEDMMVMLGRYLDYLIDIVRPRK 120
Query: 102 LLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIRE 161
LLY+A+DGVAPRAKMNQ RSRRF+++K+ + A
Sbjct: 121 LLYLAVDGVAPRAKMNQ-------------------QRSRRFKSAKDAENAELKHAEENR 161
Query: 162 KLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILS 221
+ +G PE DSNCITPGT FM+ +S L YI +R++ W + VILS
Sbjct: 162 NKVRNGL---PEVPYIKPLDSNCITPGTEFMSVVSKTLKKYIKERMSQSSYWNKLVVILS 218
Query: 222 DANVP 226
D+ VP
Sbjct: 219 DSGVP 223
>gi|343426938|emb|CBQ70466.1| probable KEM1-multifunctional nuclease [Sporisorium reilianum SRZ2]
Length = 1481
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/177 (46%), Positives = 106/177 (59%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+HP D A E ++ +A+F I+ LF ++P+K+ ++A+DG
Sbjct: 28 EFDNLYLDMNGIIHNCSHPNDNDASFRITETQIFLAVFAYIEHLFHKIKPKKVFFLAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ RSRRFR +KE E I+EK G +
Sbjct: 88 VAPRAKMNQ-------------------QRSRRFRTAKEAKE-------IKEKAERRGEV 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP E+ FDSNCITPGTPFMA LS L Y+I ++ D W+ ++VILS +VP
Sbjct: 122 LPEEEA----FDSNCITPGTPFMAKLSQQLEYFIAKKITEDADWRNVQVILSGHDVP 174
>gi|407036374|gb|EKE38129.1| 5'-3' exonuclease domain containing protein [Entamoeba nuttalli
P19]
Length = 572
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 81/185 (43%), Positives = 111/185 (60%), Gaps = 22/185 (11%)
Query: 42 DSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRK 101
D ++PN NG+E+DN Y+DMNG+IHPC HP+D+ +P+ ++MMV + +D L IVRPRK
Sbjct: 31 DLNEPNFNGVEYDNFYIDMNGLIHPCFHPQDRQSPETIEDMMVMLGRYLDYLIDIVRPRK 90
Query: 102 LLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIRE 161
LLY+A+DGVAPRAKMNQ RSRRF+++K+ + A
Sbjct: 91 LLYLAVDGVAPRAKMNQ-------------------QRSRRFKSAKDAENAELKHAEENR 131
Query: 162 KLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILS 221
+ +G PE DSNCITPGT FM+ +S L YI +R++ W + VILS
Sbjct: 132 NKVMNGL---PEVPYIKPLDSNCITPGTEFMSVVSKTLKKYIKERMSQSSYWNKLVVILS 188
Query: 222 DANVP 226
D+ VP
Sbjct: 189 DSGVP 193
>gi|388851631|emb|CCF54627.1| probable KEM1-multifunctional nuclease [Ustilago hordei]
Length = 1481
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 82/177 (46%), Positives = 106/177 (59%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+HP D A E ++ +A+F I+ LF ++P+K+ ++A+DG
Sbjct: 28 EFDNLYLDMNGIIHNCSHPNDSDASFRITETQIFLAVFAYIEHLFHKIKPKKVFFLAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ RSRRFR +KE E I+EK G +
Sbjct: 88 VAPRAKMNQ-------------------QRSRRFRTAKEAKE-------IKEKAERRGEV 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP E+ FDSNCITPGTPFMA LS L Y+I ++ D W+ ++VILS +VP
Sbjct: 122 LPEEEA----FDSNCITPGTPFMAKLSQQLEYFIAKKITEDADWRNVQVILSAHDVP 174
>gi|238579002|ref|XP_002388906.1| hypothetical protein MPER_12027 [Moniliophthora perniciosa FA553]
gi|215450629|gb|EEB89836.1| hypothetical protein MPER_12027 [Moniliophthora perniciosa FA553]
Length = 653
Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 87/201 (43%), Positives = 113/201 (56%), Gaps = 43/201 (21%)
Query: 28 VSLPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVA 85
+ +P+ + KIP EFDNLYLD NGIIH C+HP D+ A E+++ +
Sbjct: 1 MGIPKLIEENKIP-----------EFDNLYLDFNGIIHNCSHPNDEDAHFRLSEEQIFTS 49
Query: 86 IFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRA 145
IF +D LF +RP+KL +MA+DGVAPRAKMNQ RSRRFR
Sbjct: 50 IFAYVDHLFGKIRPKKLFFMAVDGVAPRAKMNQ-------------------QRSRRFRT 90
Query: 146 SKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHD 205
+KE E +REK A G LP EK FDSNCITPGT FMA LS L Y+++
Sbjct: 91 AKEARE-------VREKAEAKGEKLPDEKA----FDSNCITPGTSFMAKLSEQLRYFVNK 139
Query: 206 RLNNDPGWKGIKVILSDANVP 226
++ D W+ ++V+LS VP
Sbjct: 140 KITEDSNWRNVEVVLSGHEVP 160
>gi|47216611|emb|CAG10909.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1574
Score = 153 bits (387), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 82/177 (46%), Positives = 105/177 (59%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHP--EDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+HP ED E+++ IF ++ LFRI++PRK+ +MA+DG
Sbjct: 28 EFDNLYLDMNGIIHQCSHPNDEDVHFRISEEKIFADIFHYVEVLFRIIKPRKVFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R RRFR++KE EKI +K L G +
Sbjct: 88 VAPRAKMNQ-------------------QRGRRFRSAKEAEEKI-------KKALDKGEV 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP E + FDSNCITPGT FMA L L Y++H +L+ D W+ ++V LS P
Sbjct: 122 LPTE----ARFDSNCITPGTDFMARLQEQLEYFVHSKLSTDKLWQNVRVYLSGHETP 174
>gi|403224058|dbj|BAM42188.1| exoribonuclease [Theileria orientalis strain Shintoku]
Length = 1230
Score = 153 bits (386), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 91/196 (46%), Positives = 115/196 (58%), Gaps = 35/196 (17%)
Query: 38 KIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIV 97
++ D PNPNG EFDNLYLDMNGIIHPC HPE+ P+ E+ M I E IDR+F +V
Sbjct: 37 QVGLDLLSPNPNG-EFDNLYLDMNGIIHPCCHPENMEQPESEEIMFKCIVEYIDRIFYLV 95
Query: 98 RPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRAS------KETAE 151
RPRKL+Y+AIDGVAPRAK+NQ RSRRF+++ ET E
Sbjct: 96 RPRKLIYLAIDGVAPRAKINQ-------------------QRSRRFKSAALADLEDETYE 136
Query: 152 KIAEVARIREKLLADGCI-LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
K+ ++E L + +P K K +DSN ITPGT FM LS + YI +R+
Sbjct: 137 KM-----LKEYLEKKNDMEIPVRKNK---WDSNVITPGTEFMYKLSNKIVEYIKERVEKY 188
Query: 211 PGWKGIKVILSDANVP 226
W+ I VI SD+NVP
Sbjct: 189 DAWRRIVVIFSDSNVP 204
>gi|222615546|gb|EEE51678.1| hypothetical protein OsJ_33030 [Oryza sativa Japonica Group]
Length = 954
Score = 152 bits (384), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 86/181 (47%), Positives = 108/181 (59%), Gaps = 26/181 (14%)
Query: 53 FDNLYLDMNGIIHPCTHPEDK-----PAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAI 107
+ NLYLDMNGIIHPC HP+D+ P P +E+ ++F+ +DRL RIVRP LLY+A+
Sbjct: 41 YHNLYLDMNGIIHPCFHPQDQVCPPSPVPTTLEEVFHSMFDYMDRLIRIVRPTSLLYLAV 100
Query: 108 DGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADG 167
DGVAPRAKMNQ R+RRF+++ + E +R++ A+G
Sbjct: 101 DGVAPRAKMNQ-------------------QRARRFKSAMAAKQAEVEENILRDRFRAEG 141
Query: 168 C-ILPPEKEKGSHF-DSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANV 225
+LP E S D N IT GT FM LS L YYI RLN+DP WK I VILSDANV
Sbjct: 142 KKVLPRETSSSSEVSDPNVITLGTEFMDKLSDALKYYIRARLNSDPLWKDINVILSDANV 201
Query: 226 P 226
P
Sbjct: 202 P 202
>gi|156084528|ref|XP_001609747.1| XRN 5'-3' exonuclease protein [Babesia bovis T2Bo]
gi|154796999|gb|EDO06179.1| XRN 5'-3' exonuclease protein, putative [Babesia bovis]
Length = 988
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/181 (46%), Positives = 106/181 (58%), Gaps = 23/181 (12%)
Query: 46 PNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYM 105
PNPNG EFDNLY+DMNG+IHPC HPE P E+ M IF+ +DRL I+RPRK+L++
Sbjct: 45 PNPNG-EFDNLYIDMNGLIHPCCHPEGLEQPPSEEVMFQCIFDYLDRLMYIIRPRKILFL 103
Query: 106 AIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLA 165
AIDGVAPRAKMNQ RSRRF+++ E + +++ +
Sbjct: 104 AIDGVAPRAKMNQ-------------------QRSRRFKSAAEADLEAEIYSKVAAEFAQ 144
Query: 166 DGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANV 225
+PP K S +DSN ITPGTPFM LS + YI +R + W I VI SDAN
Sbjct: 145 RNVRIPP---KESRWDSNVITPGTPFMHELSKRVVAYIKERRDMYEAWSRIHVIYSDANS 201
Query: 226 P 226
P
Sbjct: 202 P 202
>gi|440293117|gb|ELP86279.1| 5'->3' exoribonuclease, putative [Entamoeba invadens IP1]
Length = 881
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/189 (42%), Positives = 108/189 (57%), Gaps = 30/189 (15%)
Query: 42 DSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRK 101
D PN NG E DN YLDMNG+IHPC HP+D+PAP D+M++ + +D + IVRPRK
Sbjct: 31 DLDSPNLNGFEIDNFYLDMNGLIHPCFHPQDRPAPDTIDDMLIMLKRYLDYIIDIVRPRK 90
Query: 102 LLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIRE 161
L+YMA+DGVAPRAKMNQ R+RRF+A+++ K +
Sbjct: 91 LVYMAVDGVAPRAKMNQ-------------------QRARRFKAARDAQSKEEYDEQKNI 131
Query: 162 KLLADG----CILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIK 217
L+ G I P DSNCITPGT FM ++ L Y+ +R++ WK +
Sbjct: 132 TLIQQGHSPIAIKPT-------LDSNCITPGTVFMERVTETLKEYVKERISTSAYWKKLV 184
Query: 218 VILSDANVP 226
VI+SDA+VP
Sbjct: 185 VIISDASVP 193
>gi|432915339|ref|XP_004079186.1| PREDICTED: LOW QUALITY PROTEIN: 5'-3' exoribonuclease 1-like
[Oryzias latipes]
Length = 1689
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 82/177 (46%), Positives = 105/177 (59%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHP--EDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+HP ED E+++ IF ++ LFRI++PRK+ +MA+DG
Sbjct: 28 EFDNLYLDMNGIIHQCSHPNDEDVHFRISEEKIFADIFHYLEVLFRIIKPRKVFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R RRFR++KE +KI +K L G +
Sbjct: 88 VAPRAKMNQ-------------------QRGRRFRSAKEAEDKI-------KKALDKGEV 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP E + FDSNCITPGT FMA L L Y++H++L+ D W +KV LS P
Sbjct: 122 LPTE----ARFDSNCITPGTDFMARLQEQLKYFVHNKLSTDKLWHNVKVYLSGHETP 174
>gi|426199678|gb|EKV49603.1| hypothetical protein AGABI2DRAFT_184268 [Agaricus bisporus var.
bisporus H97]
Length = 1454
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 86/196 (43%), Positives = 112/196 (57%), Gaps = 33/196 (16%)
Query: 34 VNGQKIPFDSSKPNPNGM-EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECI 90
V ++ P S N + EFDNLYLD NGIIH C+HP D+ A ED++ +IF +
Sbjct: 14 VGRERYPLTSQLIQENKIPEFDNLYLDFNGIIHNCSHPNDEDAHFRLSEDQIFTSIFAYV 73
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
D LF ++P+KL +MA+DGVAPRAKMNQ RSRRFR +KE
Sbjct: 74 DHLFGKIKPKKLFFMAVDGVAPRAKMNQ-------------------QRSRRFRTAKEAK 114
Query: 151 EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
+ +REK G LP EK FDSNCITPGT FMA LS L Y+++ +++ D
Sbjct: 115 D-------VREKAEKKGEKLPDEKA----FDSNCITPGTLFMARLSEQLRYFVNKKISED 163
Query: 211 PGWKGIKVILSDANVP 226
W+ I+V+LS VP
Sbjct: 164 ANWRDIEVVLSGHEVP 179
>gi|50293237|ref|XP_449030.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528343|emb|CAG62000.1| unnamed protein product [Candida glabrata]
Length = 1522
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/198 (42%), Positives = 110/198 (55%), Gaps = 44/198 (22%)
Query: 32 QEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKD---EDEMMVAIFE 88
Q + G +IP EFDNLYLDMN IH CTH D ++E+ IF
Sbjct: 19 QLIEGTQIP-----------EFDNLYLDMNSFIHTCTHGNDDEGVTQKMSDEELYSRIFT 67
Query: 89 CIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKE 148
ID LF +++P+K+ YM+IDGVAPRAKMNQ RSRRFR + +
Sbjct: 68 YIDHLFLMIKPKKVFYMSIDGVAPRAKMNQ-------------------QRSRRFRTAMD 108
Query: 149 TAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLN 208
T + + +K + +G +P KG FDSNCITPGT FMA L+ L+YYIHD++
Sbjct: 109 TEKAL-------QKAMDEGEEIP----KGDAFDSNCITPGTEFMAQLTRNLNYYIHDKVT 157
Query: 209 NDPGWKGIKVILSDANVP 226
ND W+ I+VILS VP
Sbjct: 158 NDANWRDIEVILSGHEVP 175
>gi|363737031|ref|XP_422596.3| PREDICTED: 5'-3' exoribonuclease 1 isoform 2 [Gallus gallus]
Length = 1736
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 82/177 (46%), Positives = 104/177 (58%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+HP D ED++ IF ++ LFRI++PRK+ +MA+DG
Sbjct: 28 EFDNLYLDMNGIIHQCSHPNDDDVHFRISEDKIFADIFHYLEVLFRIIKPRKVFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R RRFR++KE +KI +K L G I
Sbjct: 88 VAPRAKMNQ-------------------QRGRRFRSAKEAEDKI-------KKALEKGEI 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP E + FDSNCITPGT FMA L L Y+++ +++ D W+GI V LS P
Sbjct: 122 LPTE----ARFDSNCITPGTEFMARLHEHLKYFVNMKISTDKSWQGITVYLSGHETP 174
>gi|260944866|ref|XP_002616731.1| hypothetical protein CLUG_03972 [Clavispora lusitaniae ATCC 42720]
gi|238850380|gb|EEQ39844.1| hypothetical protein CLUG_03972 [Clavispora lusitaniae ATCC 42720]
Length = 327
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/183 (45%), Positives = 114/183 (62%), Gaps = 20/183 (10%)
Query: 44 SKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLL 103
S PNPNG E DNLYLDMNGI+HPC+HPE KPAP+ EDEM + +F+ +R+ + RPRK+L
Sbjct: 37 SDPNPNG-ELDNLYLDMNGIVHPCSHPEHKPAPETEDEMFLDVFKYTERVLMMARPRKVL 95
Query: 104 YMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKL 163
+A+DGVAPRAKMNQ ++ RA+ E E+ +IRE
Sbjct: 96 MIAVDGVAPRAKMNQQRARRFRA-------------AQDARAAAEEKER-----QIRE-F 136
Query: 164 LADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDA 223
A G + + +D+N ITPGTPFM L+ L Y++ +L +DPGW+ ++VI+SDA
Sbjct: 137 EARGQAIDDAIKGKKSWDTNAITPGTPFMDGLALALRYWVAHKLASDPGWRDLQVIVSDA 196
Query: 224 NVP 226
VP
Sbjct: 197 TVP 199
>gi|156097196|ref|XP_001614631.1| exoribonuclease [Plasmodium vivax Sal-1]
gi|148803505|gb|EDL44904.1| exoribonuclease, putative [Plasmodium vivax]
Length = 1353
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 82/179 (45%), Positives = 109/179 (60%), Gaps = 23/179 (12%)
Query: 47 NPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMA 106
N NG FDNLYLDMNGIIH C+H ++ K +E+ + IF I+RLF I+ P+KLLYMA
Sbjct: 77 NINGY-FDNLYLDMNGIIHLCSHSDNSKRAKSNEEIFLNIFLYIERLFDIIEPKKLLYMA 135
Query: 107 IDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLAD 166
IDGVAP+AKMNQ RSRRF++ + + ++REK L++
Sbjct: 136 IDGVAPKAKMNQ-------------------QRSRRFKSILCSEIERNAYIQLREKFLSE 176
Query: 167 GCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANV 225
++P E+ + +DSN ITPGT FM LS L Y++ ++ ND WK I VI SDANV
Sbjct: 177 NRVVP---EEFTFWDSNIITPGTQFMYELSVALKYFVEHKITNDEKWKNIVVIFSDANV 232
>gi|198417497|ref|XP_002120271.1| PREDICTED: similar to 5-3 exoribonuclease 1 [Ciona intestinalis]
Length = 665
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 82/177 (46%), Positives = 104/177 (58%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHP-EDKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+HP +D P + E+++ IF I+ LFRI+RP++ +MA+DG
Sbjct: 28 EFDNLYLDMNGIIHNCSHPNDDDPHFRITEEQIFKDIFNYIEVLFRIIRPQRTFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R RRFR++KE I + L G +
Sbjct: 88 VAPRAKMNQ-------------------QRGRRFRSAKEAENNIKQA-------LQKGEV 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP EK FDSNCITPGT FM L A L Y++ +++ DP W+GIKV LS P
Sbjct: 122 LPTEKR----FDSNCITPGTSFMEKLQAQLEYFVQNKITTDPSWQGIKVYLSGHQTP 174
>gi|123469987|ref|XP_001318202.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
gi|121900955|gb|EAY05979.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
Length = 797
Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 94/203 (46%), Positives = 114/203 (56%), Gaps = 30/203 (14%)
Query: 31 PQEVNGQKIPFDSSKPNPNGM---EFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIF 87
P E NG +P ++S PNPN + EFD LYLDMNG+IHPC HPE P PK E E++ I
Sbjct: 24 PHETNGHYLP-NASLPNPNTIGDREFDCLYLDMNGLIHPCFHPEGLPPPKSEAEVLQNIE 82
Query: 88 ECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASK 147
I+RLF IVRPR++L+MAIDG APRAKMNQ R RRF A+K
Sbjct: 83 NYIERLFMIVRPRQILFMAIDGPAPRAKMNQ-------------------QRKRRFFAAK 123
Query: 148 ETAE----KIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYI 203
+ A K + + E LA P + + DSN ITPGT F LS LH +I
Sbjct: 124 QAAHDRWIKYWKAQKSGETELAAELYNP---DYLKNHDSNVITPGTLFFERLSKHLHGFI 180
Query: 204 HDRLNNDPGWKGIKVILSDANVP 226
+ DP W I VILSDA+VP
Sbjct: 181 QRKQETDPAWGKICVILSDASVP 203
>gi|242218321|ref|XP_002474952.1| predicted protein [Postia placenta Mad-698-R]
gi|220725867|gb|EED79836.1| predicted protein [Postia placenta Mad-698-R]
Length = 253
Score = 150 bits (379), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 87/193 (45%), Positives = 110/193 (56%), Gaps = 33/193 (17%)
Query: 37 QKIPFDSSKPNPNGM-EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRL 93
++ P S N + EFDNLY+D NGIIH C+HP D A E++M +IF +D L
Sbjct: 24 ERYPLTSQLIQENKIPEFDNLYVDFNGIIHNCSHPNDGDAHFRLSEEQMFTSIFAYVDHL 83
Query: 94 FRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKI 153
F ++P+KL +MAIDGVAPRAKMNQ RSRRFR +KE E
Sbjct: 84 FGKIKPKKLFFMAIDGVAPRAKMNQ-------------------QRSRRFRTAKEARE-- 122
Query: 154 AEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGW 213
IREK G LP +K FDSNCITPGT FMA LS L Y+I+ +++ D W
Sbjct: 123 -----IREKAEQKGEKLPDQKA----FDSNCITPGTEFMAKLSEQLRYFINKKISEDSNW 173
Query: 214 KGIKVILSDANVP 226
+ I V+LS +VP
Sbjct: 174 RDITVVLSGHDVP 186
>gi|212535156|ref|XP_002147734.1| exonuclease Kem1, putative [Talaromyces marneffei ATCC 18224]
gi|210070133|gb|EEA24223.1| exonuclease Kem1, putative [Talaromyces marneffei ATCC 18224]
Length = 1419
Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 82/177 (46%), Positives = 109/177 (61%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPE-DKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLY DMNGIIH CTH + D P + ED+M +AIF I+ L+ ++P+KL +MAIDG
Sbjct: 28 EFDNLYFDMNGIIHNCTHSDSDSPTHRMSEDQMFIAIFNYIEHLYGKIKPKKLFFMAIDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R+RRFR++ + AEVA+ EK +A G
Sbjct: 88 VAPRAKMNQ-------------------QRARRFRSALD-----AEVAK--EKAIAQGIE 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
+P E FDSNCITPGT FMA L+ L Y+I +++ D W+G++++LS VP
Sbjct: 122 MPKEDA----FDSNCITPGTEFMARLTKQLKYFISKKISEDVEWQGVEIVLSGHEVP 174
>gi|224060082|ref|XP_002195477.1| PREDICTED: 5'-3' exoribonuclease 1 [Taeniopygia guttata]
Length = 1699
Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 81/177 (45%), Positives = 104/177 (58%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+HP D ED++ IF ++ LFRI++PRK+ +MA+DG
Sbjct: 28 EFDNLYLDMNGIIHQCSHPNDDDVHFRISEDKIFANIFHYLEVLFRIIKPRKVFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R RRFR++KE +KI +K L G
Sbjct: 88 VAPRAKMNQ-------------------QRGRRFRSAKEAEDKI-------KKALEKGET 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP E + FDSNCITPGT FMA L+ L Y+++ +++ D W+GI V LS P
Sbjct: 122 LPTE----ARFDSNCITPGTEFMARLNEHLKYFVNMKISTDKSWQGITVYLSGHETP 174
>gi|395528095|ref|XP_003766167.1| PREDICTED: 5'-3' exoribonuclease 1 [Sarcophilus harrisii]
Length = 1695
Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 80/177 (45%), Positives = 105/177 (59%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+HP D +D++ IF ++ LFRI++PRK+ +MA+DG
Sbjct: 13 EFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKIFADIFHYLEVLFRIIKPRKVFFMAVDG 72
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R RRFRA+KE +KI +K L G I
Sbjct: 73 VAPRAKMNQ-------------------QRGRRFRAAKEAEDKI-------KKALEKGEI 106
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP E + FDSNCITPGT FMA L L Y+++ ++++D W+G+ + LS P
Sbjct: 107 LPTE----ARFDSNCITPGTEFMARLHEHLKYFVNMKISSDKSWQGVTIYLSGHETP 159
>gi|255728793|ref|XP_002549322.1| 5'-3' exoribonuclease 1 [Candida tropicalis MYA-3404]
gi|240133638|gb|EER33194.1| 5'-3' exoribonuclease 1 [Candida tropicalis MYA-3404]
Length = 1513
Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 79/176 (44%), Positives = 101/176 (57%), Gaps = 31/176 (17%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGV 110
EFDNLYLDMN I+H CTH D + +D+M AIF ID LF+I++P+K YMAIDGV
Sbjct: 28 EFDNLYLDMNSILHACTHSNDDTLTRLTDDQMYSAIFNYIDHLFQIIKPKKTFYMAIDGV 87
Query: 111 APRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCIL 170
APRAKMNQ R+RRFR + E E + +K +A+G ++
Sbjct: 88 APRAKMNQ-------------------QRARRFRTAYEAEENL-------KKAIANGEVI 121
Query: 171 PPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
P E FDSN ITPGT FM+ L+ L Y+IH ++ D W I +ILS VP
Sbjct: 122 PKE----DPFDSNSITPGTEFMSKLTVNLKYFIHKKITEDSNWANIDIILSGHEVP 173
>gi|334347265|ref|XP_003341907.1| PREDICTED: 5'-3' exoribonuclease 1 [Monodelphis domestica]
Length = 1713
Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 80/177 (45%), Positives = 105/177 (59%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+HP D +D++ IF ++ LFRI++PRK+ +MA+DG
Sbjct: 28 EFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R RRFRA+KE +KI +K L G I
Sbjct: 88 VAPRAKMNQ-------------------QRGRRFRAAKEAEDKI-------KKALEKGEI 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP E + FDSNCITPGT FMA L L Y+++ ++++D W+G+ + LS P
Sbjct: 122 LPSE----ARFDSNCITPGTEFMARLHEHLKYFVNMKISSDKSWQGVTIYLSGHETP 174
>gi|126338146|ref|XP_001364729.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 2 [Monodelphis
domestica]
Length = 1700
Score = 150 bits (378), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 80/177 (45%), Positives = 105/177 (59%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+HP D +D++ IF ++ LFRI++PRK+ +MA+DG
Sbjct: 28 EFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R RRFRA+KE +KI +K L G I
Sbjct: 88 VAPRAKMNQ-------------------QRGRRFRAAKEAEDKI-------KKALEKGEI 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP E + FDSNCITPGT FMA L L Y+++ ++++D W+G+ + LS P
Sbjct: 122 LPSE----ARFDSNCITPGTEFMARLHEHLKYFVNMKISSDKSWQGVTIYLSGHETP 174
>gi|124506737|ref|XP_001351966.1| exoribonuclease, putative [Plasmodium falciparum 3D7]
gi|23504994|emb|CAD51777.1| exoribonuclease, putative [Plasmodium falciparum 3D7]
Length = 1311
Score = 150 bits (378), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 80/180 (44%), Positives = 112/180 (62%), Gaps = 25/180 (13%)
Query: 47 NPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMA 106
N NG FDN+YLDMNGIIH C+H ++ K +E+ + +F ++RLF I+ P+KLLYMA
Sbjct: 63 NINGY-FDNMYLDMNGIIHLCSHSDNSKRAKSNEEIFLNVFLYVERLFDIIEPKKLLYMA 121
Query: 107 IDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRA-SKETAEKIAEVARIREKLLA 165
IDGVAP+AKMNQ RSRRF++ S EK A + ++E+ +A
Sbjct: 122 IDGVAPKAKMNQ-------------------QRSRRFKSISCSEIEKRAYL-ELKERFIA 161
Query: 166 DGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANV 225
+ ++P E+ +++DSN ITPGT FM LS L Y+I ++ ND WK + VI SD+NV
Sbjct: 162 ENKMVP---EETTYWDSNVITPGTEFMHELSIALKYFIEHKITNDEKWKNVVVIFSDSNV 218
>gi|221054456|ref|XP_002258367.1| exoribonuclease [Plasmodium knowlesi strain H]
gi|193808436|emb|CAQ39139.1| exoribonuclease, putative [Plasmodium knowlesi strain H]
Length = 1324
Score = 150 bits (378), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 83/179 (46%), Positives = 107/179 (59%), Gaps = 23/179 (12%)
Query: 47 NPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMA 106
N NG FDNLYLDMNGIIH C+H ++ K +E+ + IF I+RLF I+ PRKLLYMA
Sbjct: 69 NINGY-FDNLYLDMNGIIHLCSHSDNSRRAKSNEEIFLNIFLYIERLFDIIEPRKLLYMA 127
Query: 107 IDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLAD 166
IDGVAP+AKMNQ RSRRF++ + + +REK L++
Sbjct: 128 IDGVAPKAKMNQ-------------------QRSRRFKSILCSEIERKAYIELREKFLSE 168
Query: 167 GCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANV 225
+P E+ + +DSN ITPGT FM LS L Y++ ++ ND WK I VI SDANV
Sbjct: 169 NREVP---EEFTFWDSNIITPGTQFMYELSVALKYFVEHKITNDDKWKNIVVIFSDANV 224
>gi|327267071|ref|XP_003218326.1| PREDICTED: 5'-3' exoribonuclease 1-like [Anolis carolinensis]
Length = 1744
Score = 149 bits (377), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 80/177 (45%), Positives = 103/177 (58%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+HP D ED++ IF ++ LFRI++PRK+ +MA+DG
Sbjct: 28 EFDNLYLDMNGIIHQCSHPNDDDVHFRISEDKIFADIFHYLEVLFRIIKPRKVFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R RRFR++KE +KI +K L G
Sbjct: 88 VAPRAKMNQ-------------------QRGRRFRSAKEAEDKI-------KKALEKGET 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP E + FDSNCITPGT FMA L L Y+++ +++ D W+G+ V LS P
Sbjct: 122 LPTE----ARFDSNCITPGTEFMARLHEHLKYFVNMKISTDKSWQGVTVYLSGHETP 174
>gi|407036110|gb|EKE38009.1| 5'-3' exonuclease domain containing protein [Entamoeba nuttalli
P19]
Length = 779
Score = 149 bits (376), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 81/190 (42%), Positives = 105/190 (55%), Gaps = 43/190 (22%)
Query: 42 DSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRK 101
D S PNPNG+E+DN Y+D+NG+IHPC HP D+ P+ ++ V + + ID + IVRPRK
Sbjct: 31 DLSSPNPNGVEYDNFYIDLNGLIHPCYHPTDRQTPETNVDVFVLLTQYIDYMVDIVRPRK 90
Query: 102 LLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIRE 161
LLY+AIDGVAPRAKMNQ RSRRF+ ++ + E
Sbjct: 91 LLYIAIDGVAPRAKMNQ-------------------QRSRRFKTAQSMVNQSFE------ 125
Query: 162 KLLADGCILPPEKEKGSHF-----DSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGI 216
EK S F DSNCITPGT FM +S + YI +R+N+ W I
Sbjct: 126 -------------EKKSVFKEKPIDSNCITPGTEFMEAVSKVIKAYIKERMNSSKYWNSI 172
Query: 217 KVILSDANVP 226
VI SD++VP
Sbjct: 173 IVIFSDSSVP 182
>gi|403414808|emb|CCM01508.1| predicted protein [Fibroporia radiculosa]
Length = 1961
Score = 149 bits (376), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 81/177 (45%), Positives = 104/177 (58%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLY+D NGIIH C+HP D A E+++ +IF +D LF ++P+KL +MAIDG
Sbjct: 42 EFDNLYVDFNGIIHNCSHPNDGDAHFRLSEEQIFTSIFAYVDHLFGKIKPKKLFFMAIDG 101
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ RSRRFR +KE E +REK + G
Sbjct: 102 VAPRAKMNQ-------------------QRSRRFRTAKEARE-------VREKAESKGEK 135
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP K FDSNCITPGT FMA LSA L Y+++ +++ D W + V+LS +VP
Sbjct: 136 LPDTKA----FDSNCITPGTEFMAKLSAQLQYFVNKKISEDANWSDVTVVLSGHDVP 188
>gi|390353506|ref|XP_003728123.1| PREDICTED: 5'-3' exoribonuclease 1-like [Strongylocentrotus
purpuratus]
Length = 1915
Score = 149 bits (376), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 80/177 (45%), Positives = 100/177 (56%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH CTHP D E++M +IF I+ LFRI++PRK+ +MA+DG
Sbjct: 28 EFDNLYLDMNGIIHTCTHPNDDDVHFRMTEEDMFKSIFHYIEVLFRIIKPRKVFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R RRFR++ E E+ E R G
Sbjct: 88 VAPRAKMNQ-------------------QRGRRFRSALEAEEREKEAVR-------KGET 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP EK FDSNCITPGT FM L L Y+++ ++ D W+GI++ LS P
Sbjct: 122 LPDEKR----FDSNCITPGTDFMVRLQRQLKYFVNTKITEDSKWQGIRIFLSGHETP 174
>gi|449278569|gb|EMC86380.1| 5'-3' exoribonuclease 1, partial [Columba livia]
Length = 1710
Score = 149 bits (376), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 80/177 (45%), Positives = 103/177 (58%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+HP D ED++ IF ++ LFRI++PRK+ +MA+DG
Sbjct: 3 EFDNLYLDMNGIIHQCSHPNDDDVHFRISEDKIFADIFHYLEVLFRIIKPRKVFFMAVDG 62
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R RRFR++KE +KI +K L G
Sbjct: 63 VAPRAKMNQ-------------------QRGRRFRSAKEAEDKI-------KKALEKGET 96
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP E + FDSNCITPGT FMA L L Y+++ +++ D W+G+ V LS P
Sbjct: 97 LPTE----ARFDSNCITPGTEFMARLHEHLKYFVNMKISTDKSWQGVTVYLSGHETP 149
>gi|83317292|ref|XP_731098.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23491026|gb|EAA22663.1| Drosophila melanogaster CG10354 gene product-related [Plasmodium
yoelii yoelii]
Length = 1286
Score = 149 bits (376), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 82/179 (45%), Positives = 105/179 (58%), Gaps = 23/179 (12%)
Query: 47 NPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMA 106
N NG FDN+YLDMNGIIH C+H + K ++E+ + IF I+RLF I+ P+KLLYMA
Sbjct: 63 NVNGY-FDNMYLDMNGIIHLCSHGDGSKKVKTDEEIFLNIFLYIERLFDIIEPQKLLYMA 121
Query: 107 IDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLAD 166
IDGVAP+AKMNQ RSRRF++ + + +R K L++
Sbjct: 122 IDGVAPKAKMNQ-------------------QRSRRFKSILASEIEKRAYIELRNKFLSE 162
Query: 167 GCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANV 225
+P E H+DSN ITPGT FM LS L Y+I ++ ND WK I VI SDANV
Sbjct: 163 NRNVPDE---FHHWDSNIITPGTQFMHELSVALKYFIEHKITNDEKWKKIVVIFSDANV 218
>gi|399215845|emb|CCF72533.1| unnamed protein product [Babesia microti strain RI]
Length = 803
Score = 149 bits (376), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 81/177 (45%), Positives = 105/177 (59%), Gaps = 22/177 (12%)
Query: 53 FDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAP 112
+DNLYLDMNGI+HPC HPE P P +E+EM AIF+ IDRL +RP++LLY+A+DGVAP
Sbjct: 44 YDNLYLDMNGIVHPCCHPEYLPQPSNEEEMFEAIFDYIDRLIETIRPKRLLYLALDGVAP 103
Query: 113 RAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRA--SKETAEK-IAEVARIREKLLADGCI 169
RAKMNQ RSRRF+A +E A+K + E L+
Sbjct: 104 RAKMNQ-------------------QRSRRFKAVYEREYAQKQLQNDKSTPETNLSKSRQ 144
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
P+ E+ +DSN ITPGTPFM L + Y+ +RL N W + VI+SD+N P
Sbjct: 145 NIPQNEQQKVWDSNVITPGTPFMYQLGLEVEEYVSNRLENSDIWHNLTVIISDSNSP 201
>gi|115437844|ref|XP_001217914.1| hypothetical protein ATEG_09292 [Aspergillus terreus NIH2624]
gi|114188729|gb|EAU30429.1| hypothetical protein ATEG_09292 [Aspergillus terreus NIH2624]
Length = 1413
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/177 (46%), Positives = 109/177 (61%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPE-DKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH CTH + D P + ED+M +AIF I+ L+ ++P+KL +MA+DG
Sbjct: 28 EFDNLYLDMNGIIHNCTHKDSDSPTFRMTEDKMFIAIFNYIEHLYGKIKPKKLFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R+RRFR + + AEVA+ EK +A G
Sbjct: 88 VAPRAKMNQ-------------------QRARRFRTALD-----AEVAK--EKAIAQGVE 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
+P E FDSNCITPGT FMA L+ L Y+I +++ D W+G++++LS VP
Sbjct: 122 MPKE----DAFDSNCITPGTEFMAKLTEQLKYFISKKISEDKDWQGVEIVLSGHEVP 174
>gi|169776419|ref|XP_001822676.1| exonuclease Kem1 [Aspergillus oryzae RIB40]
gi|83771411|dbj|BAE61543.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 1409
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/177 (46%), Positives = 110/177 (62%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPE-DKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH CTH + D P + ED+M +AIF I+ L+ ++P+KL +MAIDG
Sbjct: 28 EFDNLYLDMNGIIHNCTHKDSDSPTFRMTEDKMFIAIFNYIEHLYGKIKPKKLFFMAIDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R+RRFR + + AEVA+ EK ++ G
Sbjct: 88 VAPRAKMNQ-------------------QRARRFRTALD-----AEVAK--EKAISQGIE 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
+P E FDSNCITPGT FMA L+ L Y+I+ +++ D W+G++++LS VP
Sbjct: 122 MPKE----DAFDSNCITPGTEFMAKLTEQLKYFINKKISEDKDWQGVEIVLSGHEVP 174
>gi|238503103|ref|XP_002382785.1| exonuclease Kem1, putative [Aspergillus flavus NRRL3357]
gi|220691595|gb|EED47943.1| exonuclease Kem1, putative [Aspergillus flavus NRRL3357]
gi|391870653|gb|EIT79830.1| 5'-3' exonuclease XRN1/KEM1/SEP1 involved in DNA strand exchange
and mRNA turnover [Aspergillus oryzae 3.042]
Length = 1409
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/177 (46%), Positives = 110/177 (62%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPE-DKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH CTH + D P + ED+M +AIF I+ L+ ++P+KL +MAIDG
Sbjct: 28 EFDNLYLDMNGIIHNCTHKDSDSPTFRMTEDKMFIAIFNYIEHLYGKIKPKKLFFMAIDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R+RRFR + + AEVA+ EK ++ G
Sbjct: 88 VAPRAKMNQ-------------------QRARRFRTALD-----AEVAK--EKAISQGIE 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
+P E FDSNCITPGT FMA L+ L Y+I+ +++ D W+G++++LS VP
Sbjct: 122 MPKE----DAFDSNCITPGTEFMAKLTEQLKYFINKKISEDKDWQGVEIVLSGHEVP 174
>gi|367015260|ref|XP_003682129.1| hypothetical protein TDEL_0F01070 [Torulaspora delbrueckii]
gi|359749791|emb|CCE92918.1| hypothetical protein TDEL_0F01070 [Torulaspora delbrueckii]
Length = 1471
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/197 (44%), Positives = 108/197 (54%), Gaps = 43/197 (21%)
Query: 32 QEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPK--DEDEMMVAIFEC 89
Q + G +IP EFDNLYLDMN I+H CTH D K E+E+ I+
Sbjct: 19 QLIEGSQIP-----------EFDNLYLDMNSILHNCTHGNDDDVTKRMTEEEVFAKIYAY 67
Query: 90 IDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKET 149
ID LF ++P+K+ YMAIDGVAPRAKMNQ R+RRFR + +
Sbjct: 68 IDHLFHTIKPKKVFYMAIDGVAPRAKMNQ-------------------QRARRFRTAMD- 107
Query: 150 AEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNN 209
AEK E K +A+G +P KG FDSN ITPGT FMA L+ L Y+IHD++ N
Sbjct: 108 AEKAFE------KAVANGEEIP----KGEPFDSNSITPGTEFMAKLTKNLQYFIHDKITN 157
Query: 210 DPGWKGIKVILSDANVP 226
D W+ I VI S VP
Sbjct: 158 DSKWRDIDVIFSGHEVP 174
>gi|406701694|gb|EKD04809.1| strand exchange protein (5'-3' exoribonuclease) [Trichosporon
asahii var. asahii CBS 8904]
Length = 1632
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 83/167 (49%), Positives = 104/167 (62%), Gaps = 21/167 (12%)
Query: 60 MNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQP 119
MNGI+HPCTHPE + AP E +MMV +F+ +R+ + RPRK+L+MAIDGVAPRAKMNQ
Sbjct: 1 MNGIVHPCTHPEGRDAPPTEQDMMVEVFKYTERVVNMARPRKVLFMAIDGVAPRAKMNQ- 59
Query: 120 LTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSH 179
RSRRFRAS+E AEK E + A G + E +
Sbjct: 60 ------------------QRSRRFRASQEAAEKEEERKQQIAMFEAMGQTVSDETKNKKS 101
Query: 180 FDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
+DSN ITPGTPFM LSA L Y++ +L+ DPGWK VI+SDA+VP
Sbjct: 102 WDSNAITPGTPFMDLLSASLKYWVSHKLSTDPGWK--DVIISDASVP 146
>gi|254582643|ref|XP_002499053.1| ZYRO0E02486p [Zygosaccharomyces rouxii]
gi|238942627|emb|CAR30798.1| ZYRO0E02486p [Zygosaccharomyces rouxii]
Length = 1526
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 83/197 (42%), Positives = 107/197 (54%), Gaps = 43/197 (21%)
Query: 32 QEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPK--DEDEMMVAIFEC 89
Q + GQ IP EFDNLYLDMN I+H CTH D K E+E+ IF
Sbjct: 19 QLIEGQHIP-----------EFDNLYLDMNSILHTCTHGNDDDVTKRLTEEEVFGKIFVY 67
Query: 90 IDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKET 149
ID LF ++P+K+ YMAIDGVAPRAKMNQ R+RRFR + +
Sbjct: 68 IDHLFHTIKPKKVFYMAIDGVAPRAKMNQ-------------------QRARRFRTAMDA 108
Query: 150 AEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNN 209
+ + +K + +G +P KG FDSN ITPGT FMA L+ L Y+IHD++ N
Sbjct: 109 EKAL-------KKAIENGEEIP----KGEPFDSNSITPGTEFMAKLTKNLQYFIHDKITN 157
Query: 210 DPGWKGIKVILSDANVP 226
D W+ +K+I S VP
Sbjct: 158 DSSWRDVKIIFSGHEVP 174
>gi|242792196|ref|XP_002481904.1| exonuclease Kem1, putative [Talaromyces stipitatus ATCC 10500]
gi|218718492|gb|EED17912.1| exonuclease Kem1, putative [Talaromyces stipitatus ATCC 10500]
Length = 1417
Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 81/177 (45%), Positives = 108/177 (61%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPE-DKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLY DMNGIIH CTH + D P + ED+M +AIF I+ L+ ++P+KL +MA+DG
Sbjct: 28 EFDNLYFDMNGIIHNCTHSDSDSPTHRMSEDQMFIAIFNYIEHLYGKIKPKKLFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R+RRFR++ + AEVA+ EK +A G
Sbjct: 88 VAPRAKMNQ-------------------QRARRFRSALD-----AEVAK--EKAIAQGIE 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
+P E FDSNCITPGT FMA L+ L Y+I +++ D W+G+ ++LS VP
Sbjct: 122 MPKEDA----FDSNCITPGTEFMARLTKQLKYFISKKISEDVDWQGVDIVLSGHEVP 174
>gi|328709686|ref|XP_003244039.1| PREDICTED: 5'-3' exoribonuclease 1-like [Acyrthosiphon pisum]
Length = 509
Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 81/177 (45%), Positives = 108/177 (61%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHP-EDKPAPKDEDEMMVA-IFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+HP +D P + +E +V IF ++ LF++++P+KL +MAIDG
Sbjct: 28 EFDNLYLDMNGIIHNCSHPNDDDPHFRITEETIVKNIFHYLEVLFQMIQPQKLFFMAIDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R RRFR++ AE+ E ++ G
Sbjct: 88 VAPRAKMNQ-------------------QRGRRFRSAHTAAEQTKEA-------ISRGET 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP E+ FDSNCITPGTPFM L + L Y++ D+++NDP W ++VILS VP
Sbjct: 122 LPSEER----FDSNCITPGTPFMVRLQSELEYFVADKMSNDPLWTKVQVILSGHQVP 174
>gi|410924239|ref|XP_003975589.1| PREDICTED: 5'-3' exoribonuclease 1-like [Takifugu rubripes]
Length = 1673
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/177 (45%), Positives = 105/177 (59%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHP--EDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+HP ED E+++ IF ++ LFRI++P K+ +MA+DG
Sbjct: 28 EFDNLYLDMNGIIHQCSHPNDEDVHFRISEEKIFADIFHYVEVLFRIIKPCKVFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R RRFR++KE EKI +K L G +
Sbjct: 88 VAPRAKMNQ-------------------QRGRRFRSAKEAEEKI-------KKALDKGEV 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP E + FDSNCITPGT FMA L L Y++H++++ D W+ ++V LS P
Sbjct: 122 LPTE----ARFDSNCITPGTDFMARLQEQLEYFVHNKVSTDKLWQNVRVYLSGHETP 174
>gi|145242532|ref|XP_001393839.1| exonuclease Kem1 [Aspergillus niger CBS 513.88]
gi|134078390|emb|CAK40380.1| unnamed protein product [Aspergillus niger]
Length = 1406
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/177 (45%), Positives = 110/177 (62%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPE-DKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH CTH + D P + ED+M +AIF I+ L+ ++P+KL +MA+DG
Sbjct: 28 EFDNLYLDMNGIIHNCTHKDSDSPTFRMTEDKMFIAIFNYIEHLYGKIKPKKLFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R+RRFR + + AE A+ EK +A G
Sbjct: 88 VAPRAKMNQ-------------------QRARRFRTALD-----AETAK--EKAIAQGIE 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
+P E+ FDSNCITPGT FMA L+ L Y+I+ +++ D W+G++++LS VP
Sbjct: 122 MPKEEA----FDSNCITPGTEFMAKLTEQLKYFINKKISEDKDWQGVEIVLSGHEVP 174
>gi|358371673|dbj|GAA88280.1| exonuclease Kem1 [Aspergillus kawachii IFO 4308]
Length = 1405
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/177 (45%), Positives = 110/177 (62%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPE-DKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH CTH + D P + ED+M +AIF I+ L+ ++P+KL +MA+DG
Sbjct: 28 EFDNLYLDMNGIIHNCTHKDSDSPTFRMTEDKMFIAIFNYIEHLYGKIKPKKLFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R+RRFR + + AE A+ EK +A G
Sbjct: 88 VAPRAKMNQ-------------------QRARRFRTALD-----AETAK--EKAIAQGIE 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
+P E+ FDSNCITPGT FMA L+ L Y+I+ +++ D W+G++++LS VP
Sbjct: 122 MPKEEA----FDSNCITPGTEFMAKLTEQLKYFINKKISEDKDWQGVEIVLSGHEVP 174
>gi|167539832|ref|XP_001741374.1| 5'-3' exoribonuclease [Entamoeba dispar SAW760]
gi|165894075|gb|EDR22159.1| 5'-3' exoribonuclease, putative [Entamoeba dispar SAW760]
Length = 779
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/190 (42%), Positives = 104/190 (54%), Gaps = 43/190 (22%)
Query: 42 DSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRK 101
D S PNPNG+E+DN Y+D+NG+IHPC HP D+ P+ ++ V + + ID + IVRPRK
Sbjct: 31 DLSSPNPNGVEYDNFYIDLNGLIHPCYHPTDRQTPETNVDVFVLLTQYIDYMIDIVRPRK 90
Query: 102 LLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIRE 161
LLY+AIDGVAPRAKMNQ RSRRF+ + + E
Sbjct: 91 LLYIAIDGVAPRAKMNQ-------------------QRSRRFKTAYNMENQSFE------ 125
Query: 162 KLLADGCILPPEKEKGSHF-----DSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGI 216
EK S F DSNCITPGT FM +S + YI +R+N+ W I
Sbjct: 126 -------------EKKSIFKEKPVDSNCITPGTEFMEAVSKVIKAYIKERMNSSKYWNSI 172
Query: 217 KVILSDANVP 226
VI SD++VP
Sbjct: 173 IVIFSDSSVP 182
>gi|330916279|ref|XP_003297360.1| hypothetical protein PTT_07733 [Pyrenophora teres f. teres 0-1]
gi|311330012|gb|EFQ94550.1| hypothetical protein PTT_07733 [Pyrenophora teres f. teres 0-1]
Length = 1394
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/177 (44%), Positives = 107/177 (60%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKP--APKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFD LYLDMNGIIH CTH + A K ED+M ++IF I+ LF ++P++L +MAIDG
Sbjct: 28 EFDCLYLDMNGIIHNCTHNDSDSVTARKSEDQMFISIFNYIEHLFGKIKPKQLFFMAIDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R+RRFR + +T + REK + +G
Sbjct: 88 VAPRAKMNQ-------------------QRARRFRTALDT-------EKAREKAIREGVE 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
+P E+ FDSNCITPGT FMA L+ L Y+I+ +++ D W+G++V+LS VP
Sbjct: 122 MPTEEA----FDSNCITPGTAFMAKLTQQLKYFINKKVSEDIDWQGVEVVLSGHEVP 174
>gi|19114394|ref|NP_593482.1| exonuclease II Exo2 [Schizosaccharomyces pombe 972h-]
gi|729456|sp|P40383.1|XRN1_SCHPO RecName: Full=5'-3' exoribonuclease 1; AltName: Full=Exonuclease 2;
AltName: Full=Exonuclease II; Short=Exo II; AltName:
Full=p140
gi|531022|gb|AAB42181.1| deoxyribonuclease [Schizosaccharomyces pombe]
gi|2370486|emb|CAB11514.1| exonuclease II Exo2 [Schizosaccharomyces pombe]
Length = 1328
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 82/177 (46%), Positives = 106/177 (59%), Gaps = 33/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPA--PKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGI+H CTH D + P E+EM +AIF I+ LF ++P+KLLYMA+DG
Sbjct: 28 EFDNLYLDMNGILHNCTHKNDDHSSPPLPEEEMYIAIFNYIEHLFEKIKPKKLLYMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
APRAKMNQ RSRRFR +K+ A AR++ + +G
Sbjct: 88 CAPRAKMNQ-------------------QRSRRFRTAKD-----AHDARLKAE--RNGED 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
P E+ FDSNCITPGT FM +S L+Y+IH ++ ND W+ I+VI S + P
Sbjct: 122 FPEEQ-----FDSNCITPGTTFMERVSRQLYYFIHKKVTNDSQWQNIEVIFSGHDCP 173
>gi|407925965|gb|EKG18938.1| Putative 5-3 exonuclease [Macrophomina phaseolina MS6]
Length = 1429
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/177 (45%), Positives = 107/177 (60%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPE-DKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFD LYLDMNGIIH CTH + D P + ED+M +AIF I+ LF ++P+KL +MAIDG
Sbjct: 28 EFDCLYLDMNGIIHNCTHNDSDSPTHRMSEDKMFIAIFNYIEHLFGKIKPQKLFFMAIDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R+RRFR +++ E REK + +G
Sbjct: 88 VAPRAKMNQ-------------------QRARRFRTARDAEEA-------REKAIREGVE 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
+P E FDSNCITPGT FMA L+ L Y+I+ +++ D W+G++++LS VP
Sbjct: 122 MPAE----PAFDSNCITPGTEFMARLTQHLKYFINKKVSEDVDWQGVEIVLSGHEVP 174
>gi|353234672|emb|CCA66695.1| probable KEM1-5`-3` exonuclease component of cytoplasmic processing
(P) bodies [Piriformospora indica DSM 11827]
Length = 1438
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 82/185 (44%), Positives = 106/185 (57%), Gaps = 35/185 (18%)
Query: 44 SKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRK 101
+K NP DNLY+D NGIIH C+HP D E+++ +IF ++ LF ++PRK
Sbjct: 3 TKQNPI---LDNLYVDFNGIIHNCSHPNDGDVHFRLSEEQIFTSIFAYVEHLFTKIKPRK 59
Query: 102 LLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIRE 161
+ +MAIDGVAPRAKMNQ RSRRFR +KET + + E
Sbjct: 60 VFFMAIDGVAPRAKMNQ-------------------QRSRRFRTAKETKDLV-------E 93
Query: 162 KLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILS 221
K L G LP EK FDSNCITPGTPFMA LS L Y+++ ++ D W+ ++VILS
Sbjct: 94 KALRKGEKLPDEKA----FDSNCITPGTPFMARLSLQLQYFVNKKITEDSNWRDVQVILS 149
Query: 222 DANVP 226
VP
Sbjct: 150 GHEVP 154
>gi|290978067|ref|XP_002671758.1| predicted protein [Naegleria gruberi]
gi|284085329|gb|EFC39014.1| predicted protein [Naegleria gruberi]
Length = 1261
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/174 (46%), Positives = 105/174 (60%), Gaps = 30/174 (17%)
Query: 54 DNLYLDMNGIIHPCTHPEDK-PAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAP 112
DNLYLDMNGIIH CTH +D+ A E EM++ IF ID+LF++++P K ++A+DGVAP
Sbjct: 30 DNLYLDMNGIIHNCTHKDDELKAQLTEKEMILKIFRYIDQLFQLIKPSKHFFLALDGVAP 89
Query: 113 RAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCILPP 172
RAKMNQ RSRRFR K+ + ++R+KL G +P
Sbjct: 90 RAKMNQ-------------------QRSRRFR-------KVFDEQQLRKKLEQKGEKVP- 122
Query: 173 EKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
E+ + FDSNCITPGT FMA LS L Y+IH ++ D W+ KVILS VP
Sbjct: 123 --ERDNLFDSNCITPGTEFMAKLSMHLKYFIHSKMQTDIKWQQCKVILSGHEVP 174
>gi|89269888|emb|CAJ83489.1| 5'-3' exoribonuclease 1 [Xenopus (Silurana) tropicalis]
Length = 385
Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 78/177 (44%), Positives = 104/177 (58%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+HP D ED++ IF ++ LFRI++PRK+ +MA+DG
Sbjct: 28 EFDNLYLDMNGIIHQCSHPNDDDVHFRITEDKIFADIFHYLEVLFRIIKPRKVFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R RRFR++KE +KI +K + G +
Sbjct: 88 VAPRAKMNQ-------------------QRGRRFRSAKEAEDKI-------KKAVEKGEV 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP E + FDSNCITPGT FMA L L Y+++ +++ D W+G+ + LS P
Sbjct: 122 LPTE----ARFDSNCITPGTEFMARLHEHLKYFVNMKISTDKSWQGVAIYLSGHETP 174
>gi|440632608|gb|ELR02527.1| 5'-3' exoribonuclease 1 [Geomyces destructans 20631-21]
Length = 1388
Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 79/177 (44%), Positives = 105/177 (59%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTH--PEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH CTH +D E++M +AIF I+ LF ++P KL +MAIDG
Sbjct: 28 EFDNLYLDMNGIIHNCTHKDSDDATFRMTEEQMFIAIFNYIEHLFGKIKPHKLFFMAIDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R+RRFR + +V REK + +G
Sbjct: 88 VAPRAKMNQ-------------------QRARRFRTA-------LDVENAREKAIREGKE 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
+P E+ FDSNCITPGT FMA L+ L Y+I+ +++ D W+G++++LS VP
Sbjct: 122 MPKEEA----FDSNCITPGTEFMAKLTEQLKYFINKKVSEDTDWQGVEIVLSGHEVP 174
>gi|308805328|ref|XP_003079976.1| 5'-3' exoribonuclease 1 (ISS) [Ostreococcus tauri]
gi|116058433|emb|CAL53622.1| 5'-3' exoribonuclease 1 (ISS) [Ostreococcus tauri]
Length = 1418
Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 89/198 (44%), Positives = 105/198 (53%), Gaps = 43/198 (21%)
Query: 30 LPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPE--DKPAPKDEDEMMVAIF 87
L QE+ G +IP + DNLYLDMNG+IH C+H D EDEMM +F
Sbjct: 90 LQQEIAGSQIP-----------KIDNLYLDMNGVIHNCSHGAGTDVNTRMSEDEMMSKVF 138
Query: 88 ECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASK 147
+D LFR+ RP KLLYMAIDGVAPRAKMNQ RSRRFR++
Sbjct: 139 AYLDHLFRMTRPNKLLYMAIDGVAPRAKMNQ-------------------QRSRRFRSAS 179
Query: 148 ETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRL 207
E A+ E R E PE E G FDSNCITPGT FMA L+ L +Y+ +
Sbjct: 180 EAAKDREEARRRGE----------PEPE-GEPFDSNCITPGTEFMARLTEHLKFYVRKKQ 228
Query: 208 NNDPGWKGIKVILSDANV 225
DP W + VILS V
Sbjct: 229 TEDPLWAKVTVILSGHEV 246
>gi|410077707|ref|XP_003956435.1| hypothetical protein KAFR_0C03080 [Kazachstania africana CBS 2517]
gi|372463019|emb|CCF57300.1| hypothetical protein KAFR_0C03080 [Kazachstania africana CBS 2517]
Length = 1499
Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 86/199 (43%), Positives = 108/199 (54%), Gaps = 43/199 (21%)
Query: 30 LPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPK--DEDEMMVAIF 87
+ Q + G +IP EFDNLYLDMN I+H CTH D K E+E+ IF
Sbjct: 17 ISQLIEGAQIP-----------EFDNLYLDMNSILHTCTHGNDDDVTKRMTEEEVFAKIF 65
Query: 88 ECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASK 147
ID LF ++P+K+ YMAIDGVAPRAKMNQ RSRRFR +
Sbjct: 66 TYIDHLFHTIKPKKVFYMAIDGVAPRAKMNQ-------------------QRSRRFRTAM 106
Query: 148 ETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRL 207
+ AE A +K + G +P KG FDSN ITPGT FMA L+ L Y+IHD++
Sbjct: 107 D-----AEAAL--KKAIEKGEEIP----KGEPFDSNAITPGTEFMAKLTKNLKYFIHDKI 155
Query: 208 NNDPGWKGIKVILSDANVP 226
+ND W+ + VI S VP
Sbjct: 156 SNDSKWREVDVIFSGHEVP 174
>gi|400601005|gb|EJP68673.1| XRN 5'-3' exonuclease [Beauveria bassiana ARSEF 2860]
Length = 1398
Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 79/178 (44%), Positives = 104/178 (58%), Gaps = 33/178 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHP---EDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAID 108
EFD LYLDMNGIIH CTH ED E+EM + IF I+ LF ++P++L +MAID
Sbjct: 28 EFDCLYLDMNGIIHNCTHKDAGEDTTFRLSEEEMFIRIFNYIEHLFGKIKPKQLFFMAID 87
Query: 109 GVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGC 168
GVAPRAKMNQ R+RRFR + EV + REK + +G
Sbjct: 88 GVAPRAKMNQ-------------------QRARRFRTA-------LEVEKAREKAIKEGV 121
Query: 169 ILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
+P E+ FDSNCITPGT FMA LS L Y+++ +++ D W+G +++LS VP
Sbjct: 122 EMPKEEP----FDSNCITPGTEFMAKLSRQLQYFVNKKVSEDTDWQGCEIVLSGHEVP 175
>gi|301615368|ref|XP_002937144.1| PREDICTED: 5'-3' exoribonuclease 1 [Xenopus (Silurana) tropicalis]
Length = 1714
Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 77/177 (43%), Positives = 103/177 (58%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+HP D ED++ IF ++ LFRI++PRK+ +MA+DG
Sbjct: 28 EFDNLYLDMNGIIHQCSHPNDDDVHFRITEDKIFADIFHYLEVLFRIIKPRKVFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R RRFR++KE +KI +K + G +
Sbjct: 88 VAPRAKMNQ-------------------QRGRRFRSAKEAEDKI-------KKAVEKGEV 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP E + FDSNCITPG FMA L L Y+++ +++ D W+G+ + LS P
Sbjct: 122 LPTE----ARFDSNCITPGNEFMARLHEHLKYFVNMKISTDKSWQGVAIYLSGHETP 174
>gi|346325316|gb|EGX94913.1| exonuclease Kem1, putative [Cordyceps militaris CM01]
Length = 1394
Score = 147 bits (370), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 80/178 (44%), Positives = 103/178 (57%), Gaps = 33/178 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHP---EDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAID 108
EFD LYLDMNGIIH CTH ED E+EM + IF I+ LF ++PR+L +MAID
Sbjct: 28 EFDCLYLDMNGIIHNCTHKDAGEDTTFRLSEEEMFIRIFNYIEHLFGKIKPRQLFFMAID 87
Query: 109 GVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGC 168
GVAPRAKMNQ R+RRFR + EV REK + +G
Sbjct: 88 GVAPRAKMNQ-------------------QRARRFRTA-------LEVEMAREKAIKEGV 121
Query: 169 ILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
+P E+ FDSNCITPGT FMA LS L Y+++ +++ D W+G +++LS VP
Sbjct: 122 EMPKEEP----FDSNCITPGTAFMAKLSRQLQYFVNKKVSEDTDWQGCEIVLSGHEVP 175
>gi|389582934|dbj|GAB65670.1| exoribonuclease [Plasmodium cynomolgi strain B]
Length = 1327
Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 80/178 (44%), Positives = 106/178 (59%), Gaps = 23/178 (12%)
Query: 47 NPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMA 106
N NG +DNLYLDMNGIIH C+H ++ K +E+ + IF I+RLF I+ P+KLLYMA
Sbjct: 70 NINGY-YDNLYLDMNGIIHLCSHSDNSRRAKSNEEIFLNIFLYIERLFDIIEPKKLLYMA 128
Query: 107 IDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLAD 166
IDGVAP+AKMNQ RSRRF++ + + +REK L++
Sbjct: 129 IDGVAPKAKMNQ-------------------QRSRRFKSILCSEIERNAYIELREKFLSE 169
Query: 167 GCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDAN 224
+P E+ + +DSN ITPGT FM LS L Y++ ++ ND WK I VI SDAN
Sbjct: 170 NRTVP---EELTFWDSNIITPGTQFMYELSVALKYFVEHKITNDEKWKNIVVIFSDAN 224
>gi|303319605|ref|XP_003069802.1| exonuclease, putative [Coccidioides posadasii C735 delta SOWgp]
gi|240109488|gb|EER27657.1| exonuclease, putative [Coccidioides posadasii C735 delta SOWgp]
gi|320040722|gb|EFW22655.1| exonuclease [Coccidioides posadasii str. Silveira]
Length = 1445
Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 83/177 (46%), Positives = 109/177 (61%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPE-DKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFD LYLDMNGIIH CTH + D P + ED+M +AIF I+ LF ++P+KL +MAIDG
Sbjct: 28 EFDCLYLDMNGIIHNCTHKDSDSPTFRMTEDKMFIAIFNYIEHLFGKIKPKKLFFMAIDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R+RRFR + + AE+A+ EK + +G
Sbjct: 88 VAPRAKMNQ-------------------QRARRFRTALD-----AEIAK--EKAIREGIE 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
+P E FDSNCITPGT FMA L+ L Y+I+ +++ D W+G++VILS VP
Sbjct: 122 MPKEDP----FDSNCITPGTEFMAKLTKQLKYFINKKVSEDAKWQGVEVILSGHEVP 174
>gi|255715011|ref|XP_002553787.1| KLTH0E07062p [Lachancea thermotolerans]
gi|238935169|emb|CAR23350.1| KLTH0E07062p [Lachancea thermotolerans CBS 6340]
Length = 1496
Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 83/199 (41%), Positives = 106/199 (53%), Gaps = 43/199 (21%)
Query: 30 LPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPK--DEDEMMVAIF 87
+ Q ++G +IP EFDNLYLDMN I+H CTH D K E+E+ IF
Sbjct: 17 ISQLIDGTQIP-----------EFDNLYLDMNSILHTCTHANDDDVKKRMSEEEVFSKIF 65
Query: 88 ECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASK 147
ID LF + P++ YMAIDGVAPRAKMNQ R+RRFR +
Sbjct: 66 AYIDHLFHTIGPKQTFYMAIDGVAPRAKMNQ-------------------QRARRFRTAM 106
Query: 148 ETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRL 207
+ + + EK + DG +P KG FDSN ITPGT FMA L+ L Y+IHD++
Sbjct: 107 DAEKAL-------EKAIRDGEEIP----KGEPFDSNSITPGTEFMAKLTENLKYFIHDKI 155
Query: 208 NNDPGWKGIKVILSDANVP 226
+ND W +ILS VP
Sbjct: 156 SNDSAWSSTSIILSGHEVP 174
>gi|119183089|ref|XP_001242618.1| hypothetical protein CIMG_06514 [Coccidioides immitis RS]
gi|392865522|gb|EAS31317.2| exonuclease Kem1 [Coccidioides immitis RS]
Length = 1445
Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 83/177 (46%), Positives = 109/177 (61%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPE-DKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFD LYLDMNGIIH CTH + D P + ED+M +AIF I+ LF ++P+KL +MAIDG
Sbjct: 28 EFDCLYLDMNGIIHNCTHKDSDSPTFRMTEDKMFIAIFNYIEHLFGKIKPKKLFFMAIDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R+RRFR + + AE+A+ EK + +G
Sbjct: 88 VAPRAKMNQ-------------------QRARRFRTALD-----AEIAK--EKAIREGIE 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
+P E FDSNCITPGT FMA L+ L Y+I+ +++ D W+G++VILS VP
Sbjct: 122 MPKEDP----FDSNCITPGTEFMAKLTKQLKYFINKKVSEDAEWQGVEVILSGHEVP 174
>gi|67466694|ref|XP_649490.1| 5'-3' exonuclease domain containing protein [Entamoeba histolytica
HM-1:IMSS]
gi|56465942|gb|EAL44104.1| 5'-3' exonuclease domain containing protein [Entamoeba histolytica
HM-1:IMSS]
Length = 779
Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 80/190 (42%), Positives = 103/190 (54%), Gaps = 43/190 (22%)
Query: 42 DSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRK 101
D PNPNG+E+DN Y+D+NG+IHPC HP D+ P+ ++ V + ID + IVRPRK
Sbjct: 31 DLLSPNPNGVEYDNFYIDLNGLIHPCYHPTDRQTPETNVDVFVLLTRYIDYMVDIVRPRK 90
Query: 102 LLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIRE 161
LLY+AIDGVAPRAKMNQ RSRRF+ ++ + E
Sbjct: 91 LLYIAIDGVAPRAKMNQ-------------------QRSRRFKTAQNMVNQSFE------ 125
Query: 162 KLLADGCILPPEKEKGSHF-----DSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGI 216
EK S F DSNCITPGT FM +S + YI +R+N+ W I
Sbjct: 126 -------------EKKSVFKEKPIDSNCITPGTEFMEAVSKVIKAYIKERMNSSKYWNSI 172
Query: 217 KVILSDANVP 226
VI SD++VP
Sbjct: 173 IVIFSDSSVP 182
>gi|254571103|ref|XP_002492661.1| Evolutionarily-conserved 5'-3' exonuclease component of cytoplasmic
processing (P) bodies [Komagataella pastoris GS115]
gi|238032459|emb|CAY70482.1| Evolutionarily-conserved 5'-3' exonuclease component of cytoplasmic
processing (P) bodies [Komagataella pastoris GS115]
gi|328353336|emb|CCA39734.1| 5'-3' exoribonuclease 1 [Komagataella pastoris CBS 7435]
Length = 1451
Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 80/176 (45%), Positives = 103/176 (58%), Gaps = 31/176 (17%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP-KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGV 110
EFDNLYLDMN I+H CTH D E+EM AIF I+ LF +++P K +MAIDGV
Sbjct: 28 EFDNLYLDMNSILHNCTHSNDGSVDLMKEEEMFSAIFAYIEHLFTLIKPGKTFFMAIDGV 87
Query: 111 APRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCIL 170
APRAKMNQ RSRRFR + E AEK E+A+ +G I
Sbjct: 88 APRAKMNQ-------------------QRSRRFRTAIE-AEKSVEIAQ------KNGLI- 120
Query: 171 PPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
K +FDSNCITPGT FMA ++ L ++IH ++++D W+ ++VILS VP
Sbjct: 121 ---TSKDENFDSNCITPGTEFMAKVTTNLKFFIHQKISSDAKWQKVQVILSGHEVP 173
>gi|358055066|dbj|GAA98835.1| hypothetical protein E5Q_05523 [Mixia osmundae IAM 14324]
Length = 1437
Score = 146 bits (368), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 82/177 (46%), Positives = 103/177 (58%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPE--DKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+H + D E++M +AIF I+ LF +RP++ +MAIDG
Sbjct: 28 EFDNLYLDMNGIIHNCSHKDGGDVHHRVTEEQMFLAIFTYIELLFSKIRPKQTFFMAIDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ RSRRFR +KE E R+ + G
Sbjct: 88 VAPRAKMNQ-------------------QRSRRFRTAKEAKEA-------RDAAIRKGEE 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP E FDSN ITPGTPFM LSA L Y+++ +++ D W+GI+VILS VP
Sbjct: 122 LPKEDP----FDSNAITPGTPFMTRLSAQLRYFVNKKVSEDADWQGIQVILSGHEVP 174
>gi|449708316|gb|EMD47799.1| 5'3' exonuclease domain containing protein [Entamoeba histolytica
KU27]
Length = 779
Score = 146 bits (368), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 80/190 (42%), Positives = 103/190 (54%), Gaps = 43/190 (22%)
Query: 42 DSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRK 101
D PNPNG+E+DN Y+D+NG+IHPC HP D+ P+ ++ V + ID + IVRPRK
Sbjct: 31 DLLSPNPNGVEYDNFYIDLNGLIHPCYHPTDRQTPETNVDVFVLLTRYIDYMVDIVRPRK 90
Query: 102 LLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIRE 161
LLY+AIDGVAPRAKMNQ RSRRF+ ++ + E
Sbjct: 91 LLYIAIDGVAPRAKMNQ-------------------QRSRRFKTAQNMVNQSFE------ 125
Query: 162 KLLADGCILPPEKEKGSHF-----DSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGI 216
EK S F DSNCITPGT FM +S + YI +R+N+ W I
Sbjct: 126 -------------EKKSVFKEKPIDSNCITPGTEFMEAVSKVIKAYIKERMNSSKYWNSI 172
Query: 217 KVILSDANVP 226
VI SD++VP
Sbjct: 173 IVIFSDSSVP 182
>gi|329664920|ref|NP_001192964.1| 5'-3' exoribonuclease 1 [Bos taurus]
gi|296491012|tpg|DAA33110.1| TPA: 5'-3' exoribonuclease 1 isoform 2 [Bos taurus]
Length = 1703
Score = 146 bits (368), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 77/177 (43%), Positives = 102/177 (57%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+HP D +D++ IF ++ LFRI++PRK+ +MA+DG
Sbjct: 28 EFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R RRFR++KE EKI +K + G
Sbjct: 88 VAPRAKMNQ-------------------QRGRRFRSAKEAEEKI-------KKAIEKGET 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP E + FDSNCITPGT FMA L L Y+++ +++ D W+G+ + S P
Sbjct: 122 LPAE----ARFDSNCITPGTEFMARLHEHLKYFVNMKISTDKSWQGVTIYFSGHETP 174
>gi|51476722|emb|CAH18332.1| hypothetical protein [Homo sapiens]
Length = 1694
Score = 146 bits (368), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 77/177 (43%), Positives = 102/177 (57%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+HP D +D++ IF ++ LFRI++PRK+ +MA+DG
Sbjct: 28 EFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R RRFR++KE +KI EK + G
Sbjct: 88 VAPRAKMNQ-------------------QRGRRFRSAKEAEDKI-------EKAIEKGET 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP E + FDSNCITPGT FMA L L Y+++ +++ D W+G+ + S P
Sbjct: 122 LPTE----ARFDSNCITPGTEFMARLHEHLEYFVNMKISTDKSWQGVTIYFSGHETP 174
>gi|121718863|ref|XP_001276218.1| exonuclease Kem1, putative [Aspergillus clavatus NRRL 1]
gi|119404416|gb|EAW14792.1| exonuclease Kem1, putative [Aspergillus clavatus NRRL 1]
Length = 1408
Score = 146 bits (368), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 82/177 (46%), Positives = 108/177 (61%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPE-DKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFD LYLDMNGIIH CTH + D P + ED+M +AIF I+ L+ ++P+KL +MAIDG
Sbjct: 28 EFDALYLDMNGIIHNCTHKDSDSPTFRMTEDKMFIAIFNYIEHLYGKIKPKKLFFMAIDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R+RRFR + + AEVA+ EK +A G
Sbjct: 88 VAPRAKMNQ-------------------QRARRFRTALD-----AEVAK--EKAIAQGIE 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
+P E FDSNCITPGT FMA L+ L Y+I +++ D W+G++++LS VP
Sbjct: 122 MPKE----DAFDSNCITPGTEFMAKLTQQLKYFISKKISEDKDWQGVEIVLSGHEVP 174
>gi|258571185|ref|XP_002544396.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237904666|gb|EEP79067.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 1372
Score = 146 bits (368), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 83/177 (46%), Positives = 109/177 (61%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPE-DKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFD LYLDMNGIIH CTH + D P + ED+M +AIF I+ LF ++P+KL +MAIDG
Sbjct: 28 EFDCLYLDMNGIIHNCTHKDSDSPTFRMTEDKMFIAIFNYIEHLFGKIKPKKLFFMAIDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R+RRFR + + AE+A+ EK + +G
Sbjct: 88 VAPRAKMNQ-------------------QRARRFRTALD-----AEMAK--EKAIREGVE 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
+P E FDSNCITPGT FMA L+ L Y+I+ +++ D W+G++VILS VP
Sbjct: 122 MPKE----DAFDSNCITPGTEFMAKLTKQLKYFINKKVSEDAEWQGVEVILSGHEVP 174
>gi|345789293|ref|XP_534294.3| PREDICTED: 5'-3' exoribonuclease 1 isoform 2 [Canis lupus
familiaris]
Length = 1692
Score = 146 bits (368), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 77/177 (43%), Positives = 102/177 (57%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+HP D +D++ IF ++ LFRI++PRK+ +MA+DG
Sbjct: 28 EFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R RRFR++KE +KI +K L G
Sbjct: 88 VAPRAKMNQ-------------------QRGRRFRSAKEAEDKI-------KKALEKGET 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP E + FDSNCITPGT FMA L L Y+++ +++ D W+G+ + S P
Sbjct: 122 LPTE----ARFDSNCITPGTEFMARLHEHLKYFVNMKISTDKSWQGVTIYFSGHETP 174
>gi|406601833|emb|CCH46556.1| 5'-3' exoribonuclease 1 [Wickerhamomyces ciferrii]
Length = 1519
Score = 146 bits (368), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 80/199 (40%), Positives = 111/199 (55%), Gaps = 43/199 (21%)
Query: 30 LPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPK--DEDEMMVAIF 87
+ Q ++G +IP EFDNLYLDMN I+H CT P+D+ K E+E+ AIF
Sbjct: 17 ISQLIDGNQIP-----------EFDNLYLDMNSILHTCTRPKDEDVTKRLSEEEVFSAIF 65
Query: 88 ECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASK 147
ID LF ++P+++ YMAIDGVAPRAKMNQ R+RRFR +
Sbjct: 66 AYIDHLFDTIKPKEVFYMAIDGVAPRAKMNQ-------------------QRARRFRTAV 106
Query: 148 ETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRL 207
+ + + EK + +G +P K FDSN ITPGT FMA L+ L Y+IH ++
Sbjct: 107 DAEKNL-------EKAIKEGTEIP----KDEPFDSNSITPGTEFMAKLTRYLKYFIHKKV 155
Query: 208 NNDPGWKGIKVILSDANVP 226
+ D W+ +++ILS VP
Sbjct: 156 STDSRWQNVQIILSGHEVP 174
>gi|296491011|tpg|DAA33109.1| TPA: 5'-3' exoribonuclease 1 isoform 1 [Bos taurus]
Length = 1690
Score = 146 bits (368), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 77/177 (43%), Positives = 102/177 (57%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+HP D +D++ IF ++ LFRI++PRK+ +MA+DG
Sbjct: 28 EFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R RRFR++KE EKI +K + G
Sbjct: 88 VAPRAKMNQ-------------------QRGRRFRSAKEAEEKI-------KKAIEKGET 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP E + FDSNCITPGT FMA L L Y+++ +++ D W+G+ + S P
Sbjct: 122 LPAE----ARFDSNCITPGTEFMARLHEHLKYFVNMKISTDKSWQGVTIYFSGHETP 174
>gi|119498925|ref|XP_001266220.1| exonuclease Kem1, putative [Neosartorya fischeri NRRL 181]
gi|119414384|gb|EAW24323.1| exonuclease Kem1, putative [Neosartorya fischeri NRRL 181]
Length = 1414
Score = 146 bits (368), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 82/177 (46%), Positives = 108/177 (61%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPE-DKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFD LYLDMNGIIH CTH + D P + ED+M +AIF I+ L+ ++PRKL +MA+DG
Sbjct: 28 EFDALYLDMNGIIHNCTHKDSDSPTFRMTEDKMFIAIFNYIEHLYGKIKPRKLFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R+RRFR + + AEVA+ EK +A G
Sbjct: 88 VAPRAKMNQ-------------------QRARRFRTALD-----AEVAK--EKAIAQGIE 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
+P E FDSNCITPGT FMA L+ L Y+I+ +++ D W+G+ ++LS VP
Sbjct: 122 MPKE----DPFDSNCITPGTEFMAKLTQQLKYFINKKISEDKDWQGVDIVLSGHEVP 174
>gi|440911813|gb|ELR61446.1| 5'-3' exoribonuclease 1 [Bos grunniens mutus]
Length = 1727
Score = 146 bits (368), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 77/177 (43%), Positives = 102/177 (57%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+HP D +D++ IF ++ LFRI++PRK+ +MA+DG
Sbjct: 28 EFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R RRFR++KE EKI +K + G
Sbjct: 88 VAPRAKMNQ-------------------QRGRRFRSAKEAEEKI-------KKAIEKGET 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP E + FDSNCITPGT FMA L L Y+++ +++ D W+G+ + S P
Sbjct: 122 LPAE----ARFDSNCITPGTEFMARLHEHLKYFVNMKISTDKSWQGVTIYFSGHETP 174
>gi|70985050|ref|XP_748031.1| exonuclease Kem1 [Aspergillus fumigatus Af293]
gi|66845659|gb|EAL85993.1| exonuclease Kem1, putative [Aspergillus fumigatus Af293]
gi|159126045|gb|EDP51161.1| exonuclease Kem1, putative [Aspergillus fumigatus A1163]
Length = 1418
Score = 146 bits (368), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 82/177 (46%), Positives = 108/177 (61%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPE-DKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFD LYLDMNGIIH CTH + D P + ED+M +AIF I+ L+ ++PRKL +MA+DG
Sbjct: 28 EFDALYLDMNGIIHNCTHKDSDSPTFRMTEDKMFIAIFNYIEHLYGKIKPRKLFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R+RRFR + + AEVA+ EK +A G
Sbjct: 88 VAPRAKMNQ-------------------QRARRFRTALD-----AEVAK--EKAIAQGIE 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
+P E FDSNCITPGT FMA L+ L Y+I+ +++ D W+G+ ++LS VP
Sbjct: 122 MPKEDP----FDSNCITPGTEFMAKLTQQLKYFINKKISEDKDWQGVDIVLSGHEVP 174
>gi|357471609|ref|XP_003606089.1| 5'-3' exoribonuclease [Medicago truncatula]
gi|355507144|gb|AES88286.1| 5'-3' exoribonuclease [Medicago truncatula]
Length = 866
Score = 146 bits (368), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 91/193 (47%), Positives = 112/193 (58%), Gaps = 27/193 (13%)
Query: 41 FDSSKPNPN--GMEFDNLYLDMNGIIHPCTHPEDKPA-----PKDEDEMMVAIFECIDRL 93
F+ PN N +E+DNLYLDMN IIHPC HP D P E+ +FE IDRL
Sbjct: 18 FEDINPNTNTTNVEYDNLYLDMNSIIHPCFHPNDDDNNNGTPPTTFVEVFANMFEYIDRL 77
Query: 94 FRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKI 153
I +PRKLLYMAIDGVAPRAKMNQ R+RRFR K+ +
Sbjct: 78 VTIAKPRKLLYMAIDGVAPRAKMNQ-------------------QRTRRFRNVKDDEMRE 118
Query: 154 AEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGW 213
E R+R++ +G + P++E DSN ITPGT FM +S L YI ++++DP W
Sbjct: 119 VEEERLRKEFEMEGKQVLPKQECEVS-DSNIITPGTDFMHQISNALKSYISSKISSDPLW 177
Query: 214 KGIKVILSDANVP 226
KGI VILSDANVP
Sbjct: 178 KGIMVILSDANVP 190
>gi|410971335|ref|XP_003992125.1| PREDICTED: 5'-3' exoribonuclease 1 [Felis catus]
Length = 1672
Score = 146 bits (368), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 77/177 (43%), Positives = 102/177 (57%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+HP D +D++ IF ++ LFRI++PRK+ +MA+DG
Sbjct: 28 EFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R RRFR++KE +KI +K L G
Sbjct: 88 VAPRAKMNQ-------------------QRGRRFRSAKEAEDKI-------KKALEKGET 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP E + FDSNCITPGT FMA L L Y+++ +++ D W+G+ + S P
Sbjct: 122 LPTE----ARFDSNCITPGTEFMARLHEHLKYFVNMKISTDKSWQGVTIYFSGHETP 174
>gi|73990326|ref|XP_852437.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 3 [Canis lupus
familiaris]
Length = 1705
Score = 146 bits (368), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 77/177 (43%), Positives = 102/177 (57%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+HP D +D++ IF ++ LFRI++PRK+ +MA+DG
Sbjct: 28 EFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R RRFR++KE +KI +K L G
Sbjct: 88 VAPRAKMNQ-------------------QRGRRFRSAKEAEDKI-------KKALEKGET 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP E + FDSNCITPGT FMA L L Y+++ +++ D W+G+ + S P
Sbjct: 122 LPTE----ARFDSNCITPGTEFMARLHEHLKYFVNMKISTDKSWQGVTIYFSGHETP 174
>gi|291399907|ref|XP_002716612.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 2 [Oryctolagus
cuniculus]
Length = 1702
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 77/177 (43%), Positives = 102/177 (57%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+HP D ED++ IF ++ LFRI++PRK+ +MA+DG
Sbjct: 28 EFDNLYLDMNGIIHQCSHPNDDDVHFRISEDKIFTDIFHYLEVLFRIIKPRKVFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R RRFR++KE +KI +K + G
Sbjct: 88 VAPRAKMNQ-------------------QRGRRFRSAKEAEDKI-------KKAVEKGET 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP E + FDSNCITPGT FMA L L Y+++ +++ D W+G+ + S P
Sbjct: 122 LPTE----ARFDSNCITPGTEFMARLHEHLKYFVNMKISTDKSWQGVTIYFSGHETP 174
>gi|291399905|ref|XP_002716611.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 1 [Oryctolagus
cuniculus]
Length = 1727
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 77/177 (43%), Positives = 102/177 (57%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+HP D ED++ IF ++ LFRI++PRK+ +MA+DG
Sbjct: 28 EFDNLYLDMNGIIHQCSHPNDDDVHFRISEDKIFTDIFHYLEVLFRIIKPRKVFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R RRFR++KE +KI +K + G
Sbjct: 88 VAPRAKMNQ-------------------QRGRRFRSAKEAEDKI-------KKAVEKGET 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP E + FDSNCITPGT FMA L L Y+++ +++ D W+G+ + S P
Sbjct: 122 LPTE----ARFDSNCITPGTEFMARLHEHLKYFVNMKISTDKSWQGVTIYFSGHETP 174
>gi|410730385|ref|XP_003671372.2| hypothetical protein NDAI_0G03520 [Naumovozyma dairenensis CBS 421]
gi|401780190|emb|CCD26129.2| hypothetical protein NDAI_0G03520 [Naumovozyma dairenensis CBS 421]
Length = 1548
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/197 (41%), Positives = 107/197 (54%), Gaps = 43/197 (21%)
Query: 32 QEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPK--DEDEMMVAIFEC 89
Q + G +IP EFDNLYLDMN I+H CTH D K E+E+ IF
Sbjct: 19 QLIEGTQIP-----------EFDNLYLDMNSILHTCTHGNDDDVTKRMTEEEVFAKIFTY 67
Query: 90 IDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKET 149
ID LF+ ++P+K+ YMAIDGVAPRAKMNQ RSRRFR + +
Sbjct: 68 IDHLFQTIKPKKVFYMAIDGVAPRAKMNQ-------------------QRSRRFRTAMDA 108
Query: 150 AEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNN 209
+ +K L +G +P KG FDSN ITPGT FMA L+ L Y+IH++++N
Sbjct: 109 ENAL-------QKALENGEEIP----KGEPFDSNSITPGTEFMAKLTKNLKYFIHEKISN 157
Query: 210 DPGWKGIKVILSDANVP 226
D W+ +++I S P
Sbjct: 158 DAQWREVEIIFSGHEAP 174
>gi|291399909|ref|XP_002716613.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 3 [Oryctolagus
cuniculus]
Length = 1690
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 77/177 (43%), Positives = 102/177 (57%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+HP D ED++ IF ++ LFRI++PRK+ +MA+DG
Sbjct: 28 EFDNLYLDMNGIIHQCSHPNDDDVHFRISEDKIFTDIFHYLEVLFRIIKPRKVFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R RRFR++KE +KI +K + G
Sbjct: 88 VAPRAKMNQ-------------------QRGRRFRSAKEAEDKI-------KKAVEKGET 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP E + FDSNCITPGT FMA L L Y+++ +++ D W+G+ + S P
Sbjct: 122 LPTE----ARFDSNCITPGTEFMARLHEHLKYFVNMKISTDKSWQGVTIYFSGHETP 174
>gi|443927373|gb|ELU45871.1| 5'-3' exoribonculease Dhp1 [Rhizoctonia solani AG-1 IA]
Length = 1086
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/192 (46%), Positives = 114/192 (59%), Gaps = 32/192 (16%)
Query: 35 NGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLF 94
N ++P D+S PNPNG E D LYLDMNGI PAP+ E++MMV +F DR+
Sbjct: 40 NLVELPMDTSTPNPNGFELDCLYLDMNGI----------PAPETEEDMMVEVFNYTDRVV 89
Query: 95 RIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIA 154
+ RPRKLL+MAI VAPRAKMNQ RSRRFRA++E EK
Sbjct: 90 SMARPRKLLFMAI--VAPRAKMNQ-------------------QRSRRFRAAQEAKEKEE 128
Query: 155 EVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWK 214
E + A G + E K + +DSN ITPGTPFM L+ L Y++ + N+DPGWK
Sbjct: 129 ERKEAIKMFEALGHSVSEETTKKA-WDSNAITPGTPFMDLLAQSLRYWVVQKQNSDPGWK 187
Query: 215 GIKVILSDANVP 226
++VI+SDA+VP
Sbjct: 188 NLQVIISDASVP 199
>gi|395833059|ref|XP_003789564.1| PREDICTED: 5'-3' exoribonuclease 1 [Otolemur garnettii]
Length = 1666
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 102/177 (57%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+HP D +D++ IF ++ LFRI++PRK+ +MA+DG
Sbjct: 28 EFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R RRFR++KE +KI +K + G
Sbjct: 88 VAPRAKMNQ-------------------QRGRRFRSAKEAEDKI-------KKAIEKGET 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP E + FDSNCITPGT FMA L L Y+++ +++ D W+G+ + S P
Sbjct: 122 LPTE----ARFDSNCITPGTEFMARLHEHLKYFVNMKISTDKSWQGVTIYFSGHETP 174
>gi|367003924|ref|XP_003686695.1| hypothetical protein TPHA_0H00510 [Tetrapisispora phaffii CBS 4417]
gi|357524997|emb|CCE64261.1| hypothetical protein TPHA_0H00510 [Tetrapisispora phaffii CBS 4417]
Length = 1492
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/178 (46%), Positives = 103/178 (57%), Gaps = 33/178 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAPKD---EDEMMVAIFECIDRLFRIVRPRKLLYMAID 108
EFDNLYLDMN I+H CTH D + E+E+ IF ID L ++P+K+ YMAID
Sbjct: 28 EFDNLYLDMNSILHNCTHGNDMDNTRQRLSEEEVYAKIFAYIDHLLNTIKPKKVFYMAID 87
Query: 109 GVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGC 168
GVAPRAKMNQ RSRRFR + + AE A +K +A+G
Sbjct: 88 GVAPRAKMNQ-------------------QRSRRFRTAMD-----AETAL--KKAIANGD 121
Query: 169 ILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP KG FDSN ITPGT FMA L+ L Y+IHD+++ND W+ I+V+ S VP
Sbjct: 122 ELP----KGEPFDSNSITPGTEFMAKLTRNLKYFIHDKISNDLNWQNIEVVFSGHEVP 175
>gi|327301545|ref|XP_003235465.1| exonuclease [Trichophyton rubrum CBS 118892]
gi|326462817|gb|EGD88270.1| exonuclease [Trichophyton rubrum CBS 118892]
Length = 1424
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/177 (45%), Positives = 109/177 (61%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPE-DKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFD LYLDMNGIIH CTH + D P + ED+M +AIF I+ LF ++P++L +MAIDG
Sbjct: 28 EFDCLYLDMNGIIHNCTHKDSDSPTFRMTEDKMFIAIFNYIEHLFGKIKPKRLFFMAIDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R+RRFR + + AE+A+ EK + +G
Sbjct: 88 VAPRAKMNQ-------------------QRARRFRTALD-----AELAK--EKAIKEGVE 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
+P E FDSNCITPGT FMA L+ L Y+I+ +++ D W+G++V+LS VP
Sbjct: 122 MPKE----DAFDSNCITPGTEFMAKLTKQLKYFINKKVSEDAEWQGVEVVLSGHEVP 174
>gi|302656474|ref|XP_003019990.1| hypothetical protein TRV_05959 [Trichophyton verrucosum HKI 0517]
gi|291183768|gb|EFE39366.1| hypothetical protein TRV_05959 [Trichophyton verrucosum HKI 0517]
Length = 1303
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/177 (45%), Positives = 109/177 (61%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPE-DKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFD LYLDMNGIIH CTH + D P + ED+M +AIF I+ LF ++P++L +MAIDG
Sbjct: 28 EFDCLYLDMNGIIHNCTHKDSDSPTFRMTEDKMFIAIFNYIEHLFGKIKPKRLFFMAIDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R+RRFR + + AE+A+ EK + +G
Sbjct: 88 VAPRAKMNQ-------------------QRARRFRTALD-----AELAK--EKAIKEGVE 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
+P E FDSNCITPGT FMA L+ L Y+I+ +++ D W+G++V+LS VP
Sbjct: 122 MPKE----DAFDSNCITPGTEFMAKLTKQLKYFINKKVSEDAEWQGVEVVLSGHEVP 174
>gi|302506324|ref|XP_003015119.1| hypothetical protein ARB_06879 [Arthroderma benhamiae CBS 112371]
gi|291178690|gb|EFE34479.1| hypothetical protein ARB_06879 [Arthroderma benhamiae CBS 112371]
Length = 1302
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/177 (45%), Positives = 109/177 (61%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPE-DKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFD LYLDMNGIIH CTH + D P + ED+M +AIF I+ LF ++P++L +MAIDG
Sbjct: 28 EFDCLYLDMNGIIHNCTHKDSDSPTFRMTEDKMFIAIFNYIEHLFGKIKPKRLFFMAIDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R+RRFR + + AE+A+ EK + +G
Sbjct: 88 VAPRAKMNQ-------------------QRARRFRTALD-----AELAK--EKAIKEGVE 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
+P E FDSNCITPGT FMA L+ L Y+I+ +++ D W+G++V+LS VP
Sbjct: 122 MPKE----DAFDSNCITPGTEFMAKLTKQLKYFINKKVSEDAEWQGVEVVLSGHEVP 174
>gi|403163584|ref|XP_003323653.2| hypothetical protein PGTG_05555 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375164365|gb|EFP79234.2| hypothetical protein PGTG_05555 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 1452
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 77/177 (43%), Positives = 107/177 (60%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
+FDNLYLDMNGIIH C+HP + A E+++ +AIF ++ LF + +P+K+ ++A+DG
Sbjct: 28 QFDNLYLDMNGIIHHCSHPNEGSAHFRITEEDIYLAIFSYLEHLFALAKPQKVFFLAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ RSRRF+ +KE E I + R EKL
Sbjct: 88 VAPRAKMNQ-------------------QRSRRFKTAKENQELIEKAIRRGEKL------ 122
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
P+ + FDSNCITPGTPFMA LS L Y+I+ +++ D W+ ++VI S +VP
Sbjct: 123 --PDS---TGFDSNCITPGTPFMARLSEQLKYFINKKVSEDSAWQSVQVIFSGHDVP 174
>gi|296817211|ref|XP_002848942.1| exonuclease II Exo2 [Arthroderma otae CBS 113480]
gi|238839395|gb|EEQ29057.1| exonuclease II Exo2 [Arthroderma otae CBS 113480]
Length = 1412
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/177 (45%), Positives = 109/177 (61%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPE-DKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFD LYLDMNGIIH CTH + D PA + ED+M +AIF I+ LF ++P++L +MAIDG
Sbjct: 28 EFDCLYLDMNGIIHNCTHKDSDSPAFRMTEDKMFIAIFNYIEHLFGKIKPKRLFFMAIDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R+RRFR + + AE+A+ EK + +G
Sbjct: 88 VAPRAKMNQ-------------------QRARRFRTALD-----AELAK--EKAIREGVE 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
+P E FDSNCITPGT FM L+ L Y+I+ +++ D W+G++V+LS VP
Sbjct: 122 MPKE----DAFDSNCITPGTEFMTKLTKQLRYFINKKVSEDAEWQGVEVVLSGHEVP 174
>gi|259480959|tpe|CBF74062.1| TPA: exonuclease II (Eurofung) [Aspergillus nidulans FGSC A4]
Length = 1398
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 78/177 (44%), Positives = 106/177 (59%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPE-DKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH CTH + D P + ED+M +AIF I+ L+ ++P+KL +MA+DG
Sbjct: 28 EFDNLYLDMNGIIHNCTHKDSDSPTFRMTEDKMFIAIFNYIEHLYGKIKPKKLFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R+RRFR + + + +EK +A G
Sbjct: 88 VAPRAKMNQ-------------------QRARRFRTALDAEQA-------KEKAIAQGIE 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
+P E FDSNCITPGT FMA L+ L Y+I +++ D W+G++++LS VP
Sbjct: 122 MPKEDP----FDSNCITPGTEFMAKLTEQLKYFISKKISEDKDWQGVEIVLSGHEVP 174
>gi|293349379|ref|XP_001069029.2| PREDICTED: 5'-3' exoribonuclease 1 isoform 1 [Rattus norvegicus]
gi|293361286|ref|XP_217233.5| PREDICTED: 5'-3' exoribonuclease 1 isoform 3 [Rattus norvegicus]
Length = 1723
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 102/177 (57%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+HP D +D++ IF ++ LFRI++PRK+ +MA+DG
Sbjct: 28 EFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R RRFR++KE +KI +K + G
Sbjct: 88 VAPRAKMNQ-------------------QRGRRFRSAKEAEDKI-------KKAIEKGET 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP E + FDSNCITPGT FMA L L Y+++ +++ D W+G+ + S P
Sbjct: 122 LPTE----ARFDSNCITPGTEFMARLHEHLKYFVNMKISTDKSWQGVTIYFSGHETP 174
>gi|396497754|ref|XP_003845052.1| similar to 5'-3' exoribonuclease [Leptosphaeria maculans JN3]
gi|312221633|emb|CBY01573.1| similar to 5'-3' exoribonuclease [Leptosphaeria maculans JN3]
Length = 1425
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 80/177 (45%), Positives = 109/177 (61%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFD LYLDMNGIIH CTH ++ K ED+M ++IF I+ LF ++P++L++MAIDG
Sbjct: 28 EFDCLYLDMNGIIHNCTHNDNDSVTTRKSEDKMFISIFNYIEHLFGKIKPKQLIFMAIDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R+RRFR + + AEK REK + +G
Sbjct: 88 VAPRAKMNQ-------------------QRARRFRTALD-AEK------AREKAIREGVE 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
+P E+ FDSNCITPGT FMA L+ L Y+I+ +++ D W+G++V+LS VP
Sbjct: 122 MPTEEA----FDSNCITPGTAFMAKLTQQLKYFINKKISEDLDWQGVEVVLSGHEVP 174
>gi|213407328|ref|XP_002174435.1| 5'-3' exoribonuclease [Schizosaccharomyces japonicus yFS275]
gi|212002482|gb|EEB08142.1| 5'-3' exoribonuclease [Schizosaccharomyces japonicus yFS275]
Length = 1322
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 78/177 (44%), Positives = 101/177 (57%), Gaps = 33/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPED--KPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGI+H CTH D A ED+M +AIF I+ LF+ ++P+KLLYMA+DG
Sbjct: 28 EFDNLYLDMNGILHNCTHKNDDHSSAALPEDQMYIAIFNYIEHLFQKIKPKKLLYMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
APRAKMNQ RSRRFR +K+ + + R E + D
Sbjct: 88 CAPRAKMNQ-------------------QRSRRFRTAKDAYDARRKAERNGEVIAEDP-- 126
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
FDSNCITPGT FM +S LHY+I +++ D W G+++ILS + P
Sbjct: 127 ----------FDSNCITPGTVFMQRISEQLHYFIQKKVSEDSDWSGVQIILSGHDCP 173
>gi|293349381|ref|XP_002727166.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 2 [Rattus norvegicus]
gi|293361288|ref|XP_002730002.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 1 [Rattus norvegicus]
Length = 1686
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 102/177 (57%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+HP D +D++ IF ++ LFRI++PRK+ +MA+DG
Sbjct: 28 EFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R RRFR++KE +KI +K + G
Sbjct: 88 VAPRAKMNQ-------------------QRGRRFRSAKEAEDKI-------KKAIEKGET 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP E + FDSNCITPGT FMA L L Y+++ +++ D W+G+ + S P
Sbjct: 122 LPTE----ARFDSNCITPGTEFMARLHEHLKYFVNMKISTDKSWQGVTIYFSGHETP 174
>gi|350591614|ref|XP_003483306.1| PREDICTED: 5'-3' exoribonuclease 1 [Sus scrofa]
Length = 1704
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 102/177 (57%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+HP D +D++ IF ++ LFRI++PRK+ +MA+DG
Sbjct: 28 EFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R RRFR++KE +KI +K + G
Sbjct: 88 VAPRAKMNQ-------------------QRGRRFRSAKEAEDKI-------KKAIEKGET 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP E + FDSNCITPGT FMA L L Y+++ +++ D W+G+ + S P
Sbjct: 122 LPTE----ARFDSNCITPGTEFMARLHEHLKYFVNMKISTDKSWQGVTIYFSGHETP 174
>gi|452981894|gb|EME81653.1| hypothetical protein MYCFIDRAFT_215434 [Pseudocercospora fijiensis
CIRAD86]
Length = 1239
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/178 (46%), Positives = 105/178 (58%), Gaps = 33/178 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAPK---DEDEMMVAIFECIDRLFRIVRPRKLLYMAID 108
EFDNLYLDMNGIIH CTH + K EDEM + IF I+ LF ++P+KL +MAID
Sbjct: 28 EFDNLYLDMNGIIHNCTHNDSDSVTKARLSEDEMFLKIFNYIEFLFGKIKPQKLFFMAID 87
Query: 109 GVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGC 168
GVAPRAKMNQ RSRRFR + + AEK R+K +A+G
Sbjct: 88 GVAPRAKMNQ-------------------QRSRRFRTALD-AEKA------RDKAIAEGR 121
Query: 169 ILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP E FDSNCITPGT FMA L+ L Y++ +++ D W+G +++LS VP
Sbjct: 122 ELPKEDP----FDSNCITPGTEFMARLTQQLKYFVAKKVSEDGDWQGCEIVLSGHEVP 175
>gi|21755602|dbj|BAC04718.1| unnamed protein product [Homo sapiens]
Length = 473
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 102/177 (57%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+HP D +D++ IF ++ LFRI++PRK+ +MA+DG
Sbjct: 28 EFDNLYLDMNGIIHQCSHPNDDDVHFRTSDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R RRFR++KE +KI +K + G
Sbjct: 88 VAPRAKMNQ-------------------QRGRRFRSAKEAEDKI-------KKAIEKGET 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP E + FDSNCITPGT FMA L L Y+++ +++ D W+G+ + S P
Sbjct: 122 LPTE----ARFDSNCITPGTEFMARLHEHLKYFVNMKISTDKSWQGVTIYFSGHETP 174
>gi|366992011|ref|XP_003675771.1| hypothetical protein NCAS_0C04170 [Naumovozyma castellii CBS 4309]
gi|342301636|emb|CCC69407.1| hypothetical protein NCAS_0C04170 [Naumovozyma castellii CBS 4309]
Length = 1488
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/197 (42%), Positives = 104/197 (52%), Gaps = 43/197 (21%)
Query: 32 QEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPK--DEDEMMVAIFEC 89
Q + G +IP EFDNLYLDMN I+H CTH D K E+E+ IF
Sbjct: 19 QLIEGTQIP-----------EFDNLYLDMNSILHTCTHGNDDDVTKRMTEEEVFAKIFTY 67
Query: 90 IDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKET 149
ID LF ++P+K YMAIDGVAPRAKMNQ RSRRFR + +
Sbjct: 68 IDHLFLTIKPKKTFYMAIDGVAPRAKMNQ-------------------QRSRRFRTAMDA 108
Query: 150 AEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNN 209
+ +K + G +P KG FDSN ITPGT FMA L+ L Y+IHD+++N
Sbjct: 109 EHAL-------QKAIDHGEEIP----KGEPFDSNSITPGTEFMAKLTKNLKYFIHDKISN 157
Query: 210 DPGWKGIKVILSDANVP 226
D W+ I +I S VP
Sbjct: 158 DAKWREIDIIFSGHEVP 174
>gi|350591616|ref|XP_003132505.3| PREDICTED: 5'-3' exoribonuclease 1 isoform 1 [Sus scrofa]
Length = 1691
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 102/177 (57%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+HP D +D++ IF ++ LFRI++PRK+ +MA+DG
Sbjct: 28 EFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R RRFR++KE +KI +K + G
Sbjct: 88 VAPRAKMNQ-------------------QRGRRFRSAKEAEDKI-------KKAIEKGET 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP E + FDSNCITPGT FMA L L Y+++ +++ D W+G+ + S P
Sbjct: 122 LPTE----ARFDSNCITPGTEFMARLHEHLKYFVNMKISTDKSWQGVTIYFSGHETP 174
>gi|293349383|ref|XP_002727167.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 3 [Rattus norvegicus]
gi|293361290|ref|XP_002730003.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 2 [Rattus norvegicus]
gi|149018866|gb|EDL77507.1| rCG25308 [Rattus norvegicus]
Length = 1685
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 102/177 (57%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+HP D +D++ IF ++ LFRI++PRK+ +MA+DG
Sbjct: 28 EFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R RRFR++KE +KI +K + G
Sbjct: 88 VAPRAKMNQ-------------------QRGRRFRSAKEAEDKI-------KKAIEKGET 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP E + FDSNCITPGT FMA L L Y+++ +++ D W+G+ + S P
Sbjct: 122 LPTE----ARFDSNCITPGTEFMARLHEHLKYFVNMKISTDKSWQGVTIYFSGHETP 174
>gi|448107259|ref|XP_004205309.1| Piso0_003552 [Millerozyma farinosa CBS 7064]
gi|448110212|ref|XP_004201573.1| Piso0_003552 [Millerozyma farinosa CBS 7064]
gi|359382364|emb|CCE81201.1| Piso0_003552 [Millerozyma farinosa CBS 7064]
gi|359383129|emb|CCE80436.1| Piso0_003552 [Millerozyma farinosa CBS 7064]
Length = 1508
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/198 (41%), Positives = 106/198 (53%), Gaps = 42/198 (21%)
Query: 30 LPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPK-DEDEMMVAIFE 88
+ Q ++G +IP EFDNLYLDMN I+H CTH D + ED+M AIF
Sbjct: 17 ISQLIDGTQIP-----------EFDNLYLDMNSILHTCTHSNDDTLVRMTEDQMYAAIFT 65
Query: 89 CIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKE 148
I+ LF I++P K+ YMAIDGVAPRAKMNQ R+RRFR + E
Sbjct: 66 YIEHLFEIIKPNKVFYMAIDGVAPRAKMNQ-------------------QRARRFRTAYE 106
Query: 149 TAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLN 208
+ +K + DG +P E FDSN ITPGT FMA L+ L Y+IH ++
Sbjct: 107 AELNL-------KKAIQDGAEIPKE----DPFDSNAITPGTEFMAKLTDNLKYFIHKKIT 155
Query: 209 NDPGWKGIKVILSDANVP 226
D W +++ILS VP
Sbjct: 156 EDSRWANVQIILSGHEVP 173
>gi|358392275|gb|EHK41679.1| hypothetical protein TRIATDRAFT_228664 [Trichoderma atroviride IMI
206040]
Length = 1391
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 80/178 (44%), Positives = 103/178 (57%), Gaps = 33/178 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHP---EDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAID 108
EFD LYLDMNGIIH CTH ED E+EM + IF I+ LF ++P+KL +MAID
Sbjct: 34 EFDCLYLDMNGIIHNCTHKDAGEDTTFRLSEEEMFIRIFNYIEHLFGKIKPKKLFFMAID 93
Query: 109 GVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGC 168
GVAPRAKMNQ R+RRFR + +V + R+K + +G
Sbjct: 94 GVAPRAKMNQ-------------------QRARRFRTA-------LDVEKARDKAIREGV 127
Query: 169 ILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP E+ FDSNCITPGT FMA LS L Y+++ +++ D W+G V+LS VP
Sbjct: 128 ELPKEEP----FDSNCITPGTEFMAKLSQQLRYFVNKKISEDTDWQGCDVVLSGHEVP 181
>gi|328854884|gb|EGG04014.1| hypothetical protein MELLADRAFT_28527 [Melampsora larici-populina
98AG31]
Length = 206
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 79/175 (45%), Positives = 105/175 (60%), Gaps = 32/175 (18%)
Query: 54 DNLYLDMNGIIHPCTHP--EDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVA 111
DNLYLDMNGIIH C+HP ED E+++ +AIF ++ LF +V+P+KL +MA+DGVA
Sbjct: 1 DNLYLDMNGIIHNCSHPNEEDAHFRITEEQIFLAIFGYLEHLFALVKPQKLFFMAVDGVA 60
Query: 112 PRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCILP 171
PRAKMNQ RSRRFR +K+ + I + R E L
Sbjct: 61 PRAKMNQ-------------------QRSRRFRTAKDRKDMIDKAERKGETL-------- 93
Query: 172 PEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
P E FDSNCITPGTPFMA LS L Y+I+ +++ D W+G++V+ S +VP
Sbjct: 94 PSTEA---FDSNCITPGTPFMARLSEQLKYFINQKVSTDSAWQGVQVVFSGHDVP 145
>gi|392342051|ref|XP_003754494.1| PREDICTED: 5'-3' exoribonuclease 1 [Rattus norvegicus]
gi|392350274|ref|XP_003750610.1| PREDICTED: 5'-3' exoribonuclease 1 [Rattus norvegicus]
Length = 1706
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 102/177 (57%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+HP D +D++ IF ++ LFRI++PRK+ +MA+DG
Sbjct: 28 EFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R RRFR++KE +KI +K + G
Sbjct: 88 VAPRAKMNQ-------------------QRGRRFRSAKEAEDKI-------KKAIEKGET 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP E + FDSNCITPGT FMA L L Y+++ +++ D W+G+ + S P
Sbjct: 122 LPTE----ARFDSNCITPGTEFMARLHEHLKYFVNMKISTDKSWQGVTIYFSGHETP 174
>gi|392350257|ref|XP_003750606.1| PREDICTED: 5'-3' exoribonuclease 1-like, partial [Rattus
norvegicus]
Length = 453
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 102/177 (57%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+HP D +D++ IF ++ LFRI++PRK+ +MA+DG
Sbjct: 3 EFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDG 62
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R RRFR++KE +KI +K + G
Sbjct: 63 VAPRAKMNQ-------------------QRGRRFRSAKEAEDKI-------KKAIEKGET 96
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP E + FDSNCITPGT FMA L L Y+++ +++ D W+G+ + S P
Sbjct: 97 LPTE----ARFDSNCITPGTEFMARLHEHLKYFVNMKISTDKSWQGVTIYFSGHETP 149
>gi|239612327|gb|EEQ89314.1| exonuclease Kem1 [Ajellomyces dermatitidis ER-3]
Length = 1440
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 81/177 (45%), Positives = 109/177 (61%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPE-DKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFD LYLDMNGIIH CTH + D P + ED+M +AIF I+ L+ ++P+KL +MAIDG
Sbjct: 28 EFDCLYLDMNGIIHNCTHKDSDSPTFRMTEDKMFIAIFNYIEHLYGKIKPKKLFFMAIDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R+RRFR + + AEVA+ EK + G
Sbjct: 88 VAPRAKMNQ-------------------QRARRFRTALD-----AEVAK--EKAIKQGVE 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
+P E+ FDSNCITPGT FMA L+ L Y+I+ +++ D W+G++++LS VP
Sbjct: 122 MPKEEA----FDSNCITPGTEFMAKLTQQLKYFINKKVSEDVEWQGVEIVLSGHEVP 174
>gi|348581618|ref|XP_003476574.1| PREDICTED: 5'-3' exoribonuclease 1-like [Cavia porcellus]
Length = 1639
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 102/177 (57%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+HP D +D++ IF ++ LFRI++PRK+ +MA+DG
Sbjct: 28 EFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R RRFR++KE +KI +K + G
Sbjct: 88 VAPRAKMNQ-------------------QRGRRFRSAKEAEDKI-------KKAVEKGET 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP E + FDSNCITPGT FMA L L Y+++ +++ D W+G+ + S P
Sbjct: 122 LPTE----ARFDSNCITPGTEFMARLHEHLKYFVNMKISTDKSWQGVTIYFSGHETP 174
>gi|81861755|sp|P97789.1|XRN1_MOUSE RecName: Full=5'-3' exoribonuclease 1; Short=mXRN1; AltName:
Full=Protein Dhm2; AltName: Full=Strand-exchange protein
1 homolog
gi|1894791|emb|CAA62819.1| 5'-3' exonuclease [Mus musculus]
Length = 1719
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 102/177 (57%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+HP D +D++ IF ++ LFRI++PRK+ +MA+DG
Sbjct: 28 EFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R RRFR++KE +KI +K + G
Sbjct: 88 VAPRAKMNQ-------------------QRGRRFRSAKEAEDKI-------KKAIEKGET 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP E + FDSNCITPGT FMA L L Y+++ +++ D W+G+ + S P
Sbjct: 122 LPTE----ARFDSNCITPGTEFMARLHEHLKYFVNMKISTDKSWQGVTIYFSGHETP 174
>gi|351699398|gb|EHB02317.1| 5'-3' exoribonuclease 1 [Heterocephalus glaber]
Length = 1707
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 102/177 (57%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+HP D +D++ IF ++ LFRI++PRK+ +MA+DG
Sbjct: 28 EFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R RRFR++KE +KI +K + G
Sbjct: 88 VAPRAKMNQ-------------------QRGRRFRSAKEAEDKI-------KKAIEKGET 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP E + FDSNCITPGT FMA L L Y+++ +++ D W+G+ + S P
Sbjct: 122 LPTE----ARFDSNCITPGTEFMARLHEHLKYFVNVKISTDKSWQGVTIYFSGHETP 174
>gi|313230942|emb|CBY18940.1| unnamed protein product [Oikopleura dioica]
Length = 1623
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/177 (45%), Positives = 101/177 (57%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHP-EDKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIHPC+HP +D P + E+++ IF I+ LFRI+RPRK+ +MA+DG
Sbjct: 28 EFDNLYLDMNGIIHPCSHPNDDDPHFRITEEQIFKDIFHYIECLFRIIRPRKVFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ RSRRFR++KE E + E L +G
Sbjct: 88 VAPRAKMNQ-------------------QRSRRFRSAKEAEENERKAKEKGESLPTEG-- 126
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
FDSN ITPGT FM L L Y+I +++ +D W+GI V LS P
Sbjct: 127 ---------KFDSNVITPGTGFMVRLDKQLRYFIQNKITHDDAWRGITVFLSGHETP 174
>gi|295657260|ref|XP_002789200.1| 5'-3' exoribonuclease [Paracoccidioides sp. 'lutzii' Pb01]
gi|226284447|gb|EEH40013.1| 5'-3' exoribonuclease [Paracoccidioides sp. 'lutzii' Pb01]
Length = 1445
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 81/177 (45%), Positives = 109/177 (61%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPE-DKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFD LYLDMNGIIH CTH + D P + ED+M +AIF I+ L+ ++P+KL +MAIDG
Sbjct: 28 EFDCLYLDMNGIIHNCTHKDSDSPTFRMTEDKMFIAIFNYIEHLYGKIKPKKLFFMAIDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R+RRFR + + AEVA+ EK + G
Sbjct: 88 VAPRAKMNQ-------------------QRARRFRTAYD-----AEVAK--EKAIKQGIE 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
+P E+ FDSNCITPGT FMA L+ L Y+I+ +++ D W+G++++LS VP
Sbjct: 122 MPKEEA----FDSNCITPGTEFMAKLTQQLKYFINKKVSEDVEWQGVEIVLSGHEVP 174
>gi|2281015|dbj|BAA21563.1| Dhm2 protein [Mus musculus]
Length = 1687
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 103/177 (58%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+HP D +D++ IF ++ LFRI++PRK+ +MA+DG
Sbjct: 28 EFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R+RRFR++KE +KI +K + G
Sbjct: 88 VAPRAKMNQ-------------------QRARRFRSAKEAEDKI-------KKAIEKGET 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP E + FDSNCITPGT FMA L L Y+++ +++ D W+G+ + S P
Sbjct: 122 LPTE----ARFDSNCITPGTEFMARLHEHLKYFVNMKISTDKSWQGVTIYFSGHETP 174
>gi|67902396|ref|XP_681454.1| hypothetical protein AN8185.2 [Aspergillus nidulans FGSC A4]
gi|40740017|gb|EAA59207.1| hypothetical protein AN8185.2 [Aspergillus nidulans FGSC A4]
Length = 1699
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/177 (44%), Positives = 106/177 (59%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPE-DKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH CTH + D P + ED+M +AIF I+ L+ ++P+KL +MA+DG
Sbjct: 28 EFDNLYLDMNGIIHNCTHKDSDSPTFRMTEDKMFIAIFNYIEHLYGKIKPKKLFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R+RRFR + + + +EK +A G
Sbjct: 88 VAPRAKMNQ-------------------QRARRFRTALDAEQA-------KEKAIAQGIE 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
+P E FDSNCITPGT FMA L+ L Y+I +++ D W+G++++LS VP
Sbjct: 122 MPKEDP----FDSNCITPGTEFMAKLTEQLKYFISKKISEDKDWQGVEIVLSGHEVP 174
>gi|261202580|ref|XP_002628504.1| exonuclease Kem1 [Ajellomyces dermatitidis SLH14081]
gi|239590601|gb|EEQ73182.1| exonuclease Kem1 [Ajellomyces dermatitidis SLH14081]
Length = 1440
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 81/177 (45%), Positives = 109/177 (61%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPE-DKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFD LYLDMNGIIH CTH + D P + ED+M +AIF I+ L+ ++P+KL +MAIDG
Sbjct: 28 EFDCLYLDMNGIIHNCTHKDSDSPTFRMTEDKMFIAIFNYIEHLYGKIKPKKLFFMAIDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R+RRFR + + AEVA+ EK + G
Sbjct: 88 VAPRAKMNQ-------------------QRARRFRTALD-----AEVAK--EKAIKQGIE 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
+P E+ FDSNCITPGT FMA L+ L Y+I+ +++ D W+G++++LS VP
Sbjct: 122 MPKEEA----FDSNCITPGTEFMAKLTQQLKYFINKKVSEDVEWQGVEIVLSGHEVP 174
>gi|327353279|gb|EGE82136.1| exonuclease [Ajellomyces dermatitidis ATCC 18188]
Length = 1440
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 81/177 (45%), Positives = 109/177 (61%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPE-DKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFD LYLDMNGIIH CTH + D P + ED+M +AIF I+ L+ ++P+KL +MAIDG
Sbjct: 28 EFDCLYLDMNGIIHNCTHKDSDSPTFRMTEDKMFIAIFNYIEHLYGKIKPKKLFFMAIDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R+RRFR + + AEVA+ EK + G
Sbjct: 88 VAPRAKMNQ-------------------QRARRFRTALD-----AEVAK--EKAIKQGIE 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
+P E+ FDSNCITPGT FMA L+ L Y+I+ +++ D W+G++++LS VP
Sbjct: 122 MPKEEA----FDSNCITPGTEFMAKLTQQLKYFINKKVSEDVEWQGVEIVLSGHEVP 174
>gi|148688999|gb|EDL20946.1| 5'-3' exoribonuclease 1 [Mus musculus]
Length = 1685
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 102/177 (57%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+HP D +D++ IF ++ LFRI++PRK+ +MA+DG
Sbjct: 28 EFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R RRFR++KE +KI +K + G
Sbjct: 88 VAPRAKMNQ-------------------QRGRRFRSAKEAEDKI-------KKAIEKGET 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP E + FDSNCITPGT FMA L L Y+++ +++ D W+G+ + S P
Sbjct: 122 LPTE----ARFDSNCITPGTEFMARLHEHLKYFVNMKISTDKSWQGVTIYFSGHETP 174
>gi|1894792|emb|CAA62820.1| 5'-3' exonuclease [Mus musculus]
Length = 1706
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 102/177 (57%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+HP D +D++ IF ++ LFRI++PRK+ +MA+DG
Sbjct: 28 EFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R RRFR++KE +KI +K + G
Sbjct: 88 VAPRAKMNQ-------------------QRGRRFRSAKEAEDKI-------KKAIEKGET 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP E + FDSNCITPGT FMA L L Y+++ +++ D W+G+ + S P
Sbjct: 122 LPTE----ARFDSNCITPGTEFMARLHEHLKYFVNMKISTDKSWQGVTIYFSGHETP 174
>gi|115495455|ref|NP_036046.2| 5'-3' exoribonuclease 1 [Mus musculus]
gi|162318350|gb|AAI56977.1| 5'-3' exoribonuclease 1 [synthetic construct]
gi|162319526|gb|AAI56134.1| 5'-3' exoribonuclease 1 [synthetic construct]
Length = 1723
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 102/177 (57%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+HP D +D++ IF ++ LFRI++PRK+ +MA+DG
Sbjct: 28 EFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R RRFR++KE +KI +K + G
Sbjct: 88 VAPRAKMNQ-------------------QRGRRFRSAKEAEDKI-------KKAIEKGET 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP E + FDSNCITPGT FMA L L Y+++ +++ D W+G+ + S P
Sbjct: 122 LPTE----ARFDSNCITPGTEFMARLHEHLKYFVNMKISTDKSWQGVTIYFSGHETP 174
>gi|29126940|gb|AAH48104.1| XRN1 protein [Homo sapiens]
Length = 459
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 102/177 (57%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+HP D +D++ IF ++ LFRI++PRK+ +MA+DG
Sbjct: 28 EFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R RRFR++KE +KI +K + G
Sbjct: 88 VAPRAKMNQ-------------------QRGRRFRSAKEAEDKI-------KKAIEKGET 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP E + FDSNCITPGT FMA L L Y+++ +++ D W+G+ + S P
Sbjct: 122 LPTE----ARFDSNCITPGTEFMAKLHEHLKYFVNMKISTDKSWQGVTIYFSGHETP 174
>gi|444322153|ref|XP_004181732.1| hypothetical protein TBLA_0G02750 [Tetrapisispora blattae CBS 6284]
gi|387514777|emb|CCH62213.1| hypothetical protein TBLA_0G02750 [Tetrapisispora blattae CBS 6284]
Length = 1546
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/199 (39%), Positives = 107/199 (53%), Gaps = 45/199 (22%)
Query: 32 QEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAP----KDEDEMMVAIF 87
Q + G +IP EFDNLYLDMN I+H CTH D + E+E+ IF
Sbjct: 19 QLIEGNQIP-----------EFDNLYLDMNSILHTCTHSNDDSSDITKRLSEEEVFAKIF 67
Query: 88 ECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASK 147
ID LF ++P++ YMAIDGVAPRAKMNQ R+RRFR +
Sbjct: 68 TYIDHLFMTIKPKQTFYMAIDGVAPRAKMNQ-------------------QRARRFRTAM 108
Query: 148 ETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRL 207
+ + + +K + +G +P KG FDSN ITPGT FMA L+ L Y+IHD++
Sbjct: 109 DAEKAL-------QKAIEEGTEIP----KGEPFDSNSITPGTEFMAKLTKNLKYFIHDKI 157
Query: 208 NNDPGWKGIKVILSDANVP 226
+ND W+ ++++ S VP
Sbjct: 158 SNDSNWRNVEIVFSGHEVP 176
>gi|430814593|emb|CCJ28201.1| unnamed protein product [Pneumocystis jirovecii]
Length = 1318
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/175 (43%), Positives = 105/175 (60%), Gaps = 31/175 (17%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVA 111
EFDNLYLDMNGIIH CTH ++ E+E +AIF+ I+ LF ++P+KL ++++DGVA
Sbjct: 28 EFDNLYLDMNGIIHNCTHMDENKKEIPENEAFLAIFKYIEHLFGTIKPKKLFFLSVDGVA 87
Query: 112 PRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCILP 171
PRAKMNQ RSRRF+A+KE E + ++ ++ G +P
Sbjct: 88 PRAKMNQ-------------------QRSRRFKAAKEAYE-------LYQEKISKGEDVP 121
Query: 172 PEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
+ FDSNCITPGT FM LS L Y+I+ +++ D WKGI++I S VP
Sbjct: 122 KDP-----FDSNCITPGTLFMKRLSEQLKYFINRKVSEDTNWKGIEIIFSGHEVP 171
>gi|344288974|ref|XP_003416221.1| PREDICTED: LOW QUALITY PROTEIN: 5'-3' exoribonuclease 1-like
[Loxodonta africana]
Length = 1706
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 102/177 (57%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+HP D +D++ IF ++ LFRI++PRK+ +MA+DG
Sbjct: 28 EFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R RRFR++KE +KI +K + G
Sbjct: 88 VAPRAKMNQ-------------------QRGRRFRSAKEAEDKI-------KKAIEKGET 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP E + FDSNCITPGT FMA L L Y+++ +++ D W+G+ + S P
Sbjct: 122 LPTE----ARFDSNCITPGTEFMARLHEHLKYFVNMKISTDKSWQGVTIYFSGHETP 174
>gi|426219417|ref|XP_004003922.1| PREDICTED: 5'-3' exoribonuclease 1 [Ovis aries]
Length = 1702
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 102/177 (57%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+HP D +D++ IF ++ LFRI++PRK+ +MA+DG
Sbjct: 28 EFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R RRFR++KE +KI +K + G
Sbjct: 88 VAPRAKMNQ-------------------QRGRRFRSAKEAEDKI-------KKAIEKGET 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP E + FDSNCITPGT FMA L L Y+++ +++ D W+G+ + S P
Sbjct: 122 LPAE----ARFDSNCITPGTEFMARLHEHLKYFVNMKISTDKSWQGVTIYFSGHETP 174
>gi|354466144|ref|XP_003495535.1| PREDICTED: 5'-3' exoribonuclease 1 [Cricetulus griseus]
gi|344244388|gb|EGW00492.1| 5'-3' exoribonuclease 1 [Cricetulus griseus]
Length = 1726
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 102/177 (57%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+HP D +D++ IF ++ LFRI++PRK+ +MA+DG
Sbjct: 28 EFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R RRFR++KE +KI +K + G
Sbjct: 88 VAPRAKMNQ-------------------QRGRRFRSAKEAEDKI-------KKAIEKGET 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP E + FDSNCITPGT FMA L L Y+++ +++ D W+G+ + S P
Sbjct: 122 LPTE----ARFDSNCITPGTEFMARLHEHLKYFVNMKISTDKSWQGVTIYFSGHETP 174
>gi|402861336|ref|XP_003895053.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 1 [Papio anubis]
Length = 1694
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 102/177 (57%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+HP D +D++ IF ++ LFRI++PRK+ +MA+DG
Sbjct: 28 EFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R RRFR++KE +KI +K + G
Sbjct: 88 VAPRAKMNQ-------------------QRGRRFRSAKEAEDKI-------KKAIEKGET 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP E + FDSNCITPGT FMA L L Y+++ +++ D W+G+ + S P
Sbjct: 122 LPTE----ARFDSNCITPGTEFMARLHEHLKYFVNMKISTDKSWQGVTIYFSGHETP 174
>gi|402861338|ref|XP_003895054.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 2 [Papio anubis]
Length = 1706
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 102/177 (57%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+HP D +D++ IF ++ LFRI++PRK+ +MA+DG
Sbjct: 28 EFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R RRFR++KE +KI +K + G
Sbjct: 88 VAPRAKMNQ-------------------QRGRRFRSAKEAEDKI-------KKAIEKGET 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP E + FDSNCITPGT FMA L L Y+++ +++ D W+G+ + S P
Sbjct: 122 LPTE----ARFDSNCITPGTEFMARLHEHLKYFVNMKISTDKSWQGVTIYFSGHETP 174
>gi|71052193|gb|AAH39314.1| XRN1 protein [Homo sapiens]
Length = 459
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 102/177 (57%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+HP D +D++ IF ++ LFRI++PRK+ +MA+DG
Sbjct: 28 EFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R RRFR++KE +KI +K + G
Sbjct: 88 VAPRAKMNQ-------------------QRGRRFRSAKEAEDKI-------KKAIEKGET 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP E + FDSNCITPGT FMA L L Y+++ +++ D W+G+ + S P
Sbjct: 122 LPTE----ARFDSNCITPGTEFMARLHEHLKYFVNMKISTDKSWQGVTIYFSGHETP 174
>gi|109048976|ref|XP_001112305.1| PREDICTED: 5'-3' exoribonuclease 1-like isoform 2 [Macaca mulatta]
gi|355747003|gb|EHH51617.1| hypothetical protein EGM_11029 [Macaca fascicularis]
Length = 1706
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 102/177 (57%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+HP D +D++ IF ++ LFRI++PRK+ +MA+DG
Sbjct: 28 EFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R RRFR++KE +KI +K + G
Sbjct: 88 VAPRAKMNQ-------------------QRGRRFRSAKEAEDKI-------KKAIEKGET 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP E + FDSNCITPGT FMA L L Y+++ +++ D W+G+ + S P
Sbjct: 122 LPTE----ARFDSNCITPGTEFMARLHEHLKYFVNMKISTDKSWQGVTIYFSGHETP 174
>gi|110624792|ref|NP_061874.3| 5'-3' exoribonuclease 1 isoform a [Homo sapiens]
gi|74714582|sp|Q8IZH2.1|XRN1_HUMAN RecName: Full=5'-3' exoribonuclease 1; AltName:
Full=Strand-exchange protein 1 homolog
gi|24474444|gb|AAN11306.1| DNA strand-exchange protein SEP1 [Homo sapiens]
gi|119599377|gb|EAW78971.1| 5'-3' exoribonuclease 1, isoform CRA_a [Homo sapiens]
gi|146327192|gb|AAI41556.1| 5'-3' exoribonuclease 1 [synthetic construct]
gi|261857762|dbj|BAI45403.1| 5'-3' exoribonuclease 1 [synthetic construct]
Length = 1706
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 102/177 (57%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+HP D +D++ IF ++ LFRI++PRK+ +MA+DG
Sbjct: 28 EFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R RRFR++KE +KI +K + G
Sbjct: 88 VAPRAKMNQ-------------------QRGRRFRSAKEAEDKI-------KKAIEKGET 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP E + FDSNCITPGT FMA L L Y+++ +++ D W+G+ + S P
Sbjct: 122 LPTE----ARFDSNCITPGTEFMARLHEHLKYFVNMKISTDKSWQGVTIYFSGHETP 174
>gi|383419337|gb|AFH32882.1| 5'-3' exoribonuclease 1 isoform a [Macaca mulatta]
Length = 1707
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 102/177 (57%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+HP D +D++ IF ++ LFRI++PRK+ +MA+DG
Sbjct: 28 EFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R RRFR++KE +KI +K + G
Sbjct: 88 VAPRAKMNQ-------------------QRGRRFRSAKEAEDKI-------KKAIEKGET 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP E + FDSNCITPGT FMA L L Y+++ +++ D W+G+ + S P
Sbjct: 122 LPTE----ARFDSNCITPGTEFMARLHEHLKYFVNMKISTDKSWQGVTIYFSGHETP 174
>gi|380813908|gb|AFE78828.1| 5'-3' exoribonuclease 1 isoform a [Macaca mulatta]
Length = 1707
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 102/177 (57%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+HP D +D++ IF ++ LFRI++PRK+ +MA+DG
Sbjct: 28 EFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R RRFR++KE +KI +K + G
Sbjct: 88 VAPRAKMNQ-------------------QRGRRFRSAKEAEDKI-------KKAIEKGET 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP E + FDSNCITPGT FMA L L Y+++ +++ D W+G+ + S P
Sbjct: 122 LPTE----ARFDSNCITPGTEFMARLHEHLKYFVNMKISTDKSWQGVTIYFSGHETP 174
>gi|383419335|gb|AFH32881.1| 5'-3' exoribonuclease 1 isoform b [Macaca mulatta]
Length = 1694
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 102/177 (57%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+HP D +D++ IF ++ LFRI++PRK+ +MA+DG
Sbjct: 28 EFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R RRFR++KE +KI +K + G
Sbjct: 88 VAPRAKMNQ-------------------QRGRRFRSAKEAEDKI-------KKAIEKGET 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP E + FDSNCITPGT FMA L L Y+++ +++ D W+G+ + S P
Sbjct: 122 LPTE----ARFDSNCITPGTEFMARLHEHLKYFVNMKISTDKSWQGVTIYFSGHETP 174
>gi|297286724|ref|XP_001112265.2| PREDICTED: 5'-3' exoribonuclease 1-like isoform 1 [Macaca mulatta]
Length = 1693
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 102/177 (57%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+HP D +D++ IF ++ LFRI++PRK+ +MA+DG
Sbjct: 28 EFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R RRFR++KE +KI +K + G
Sbjct: 88 VAPRAKMNQ-------------------QRGRRFRSAKEAEDKI-------KKAIEKGET 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP E + FDSNCITPGT FMA L L Y+++ +++ D W+G+ + S P
Sbjct: 122 LPTE----ARFDSNCITPGTEFMARLHEHLKYFVNMKISTDKSWQGVTIYFSGHETP 174
>gi|50949885|emb|CAH10490.1| hypothetical protein [Homo sapiens]
gi|119599378|gb|EAW78972.1| 5'-3' exoribonuclease 1, isoform CRA_b [Homo sapiens]
Length = 1694
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 102/177 (57%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+HP D +D++ IF ++ LFRI++PRK+ +MA+DG
Sbjct: 28 EFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R RRFR++KE +KI +K + G
Sbjct: 88 VAPRAKMNQ-------------------QRGRRFRSAKEAEDKI-------KKAIEKGET 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP E + FDSNCITPGT FMA L L Y+++ +++ D W+G+ + S P
Sbjct: 122 LPTE----ARFDSNCITPGTEFMARLHEHLKYFVNMKISTDKSWQGVTIYFSGHETP 174
>gi|380813906|gb|AFE78827.1| 5'-3' exoribonuclease 1 isoform b [Macaca mulatta]
Length = 1694
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 102/177 (57%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+HP D +D++ IF ++ LFRI++PRK+ +MA+DG
Sbjct: 28 EFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R RRFR++KE +KI +K + G
Sbjct: 88 VAPRAKMNQ-------------------QRGRRFRSAKEAEDKI-------KKAIEKGET 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP E + FDSNCITPGT FMA L L Y+++ +++ D W+G+ + S P
Sbjct: 122 LPTE----ARFDSNCITPGTEFMARLHEHLKYFVNMKISTDKSWQGVTIYFSGHETP 174
>gi|119599379|gb|EAW78973.1| 5'-3' exoribonuclease 1, isoform CRA_c [Homo sapiens]
Length = 1693
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 102/177 (57%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+HP D +D++ IF ++ LFRI++PRK+ +MA+DG
Sbjct: 28 EFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R RRFR++KE +KI +K + G
Sbjct: 88 VAPRAKMNQ-------------------QRGRRFRSAKEAEDKI-------KKAIEKGET 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP E + FDSNCITPGT FMA L L Y+++ +++ D W+G+ + S P
Sbjct: 122 LPTE----ARFDSNCITPGTEFMARLHEHLKYFVNMKISTDKSWQGVTIYFSGHETP 174
>gi|110624787|ref|NP_001036069.1| 5'-3' exoribonuclease 1 isoform b [Homo sapiens]
Length = 1693
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 102/177 (57%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+HP D +D++ IF ++ LFRI++PRK+ +MA+DG
Sbjct: 28 EFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R RRFR++KE +KI +K + G
Sbjct: 88 VAPRAKMNQ-------------------QRGRRFRSAKEAEDKI-------KKAIEKGET 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP E + FDSNCITPGT FMA L L Y+++ +++ D W+G+ + S P
Sbjct: 122 LPTE----ARFDSNCITPGTEFMARLHEHLKYFVNMKISTDKSWQGVTIYFSGHETP 174
>gi|403304034|ref|XP_003942618.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 1 [Saimiri boliviensis
boliviensis]
Length = 1706
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 102/177 (57%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+HP D +D++ IF ++ LFRI++PRK+ +MA+DG
Sbjct: 28 EFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R RRFR++KE +KI +K + G
Sbjct: 88 VAPRAKMNQ-------------------QRGRRFRSAKEAEDKI-------KKAIEKGET 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP E + FDSNCITPGT FMA L L Y+++ +++ D W+G+ + S P
Sbjct: 122 LPTE----ARFDSNCITPGTEFMARLHEHLKYFVNMKISTDKSWQGVTIYFSGHETP 174
>gi|74210743|dbj|BAE25024.1| unnamed protein product [Mus musculus]
Length = 778
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 103/177 (58%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+HP D +D++ IF ++ LFRI++PRK+ +MA+DG
Sbjct: 28 EFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R RRFR++KE +KI +K + G
Sbjct: 88 VAPRAKMNQ-------------------QRGRRFRSAKEAEDKI-------KKAIEKGET 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP E + FDSNCITPGT FMA L L Y+++ +++ D W+G+ + S + P
Sbjct: 122 LPTE----ARFDSNCITPGTEFMARLHEHLKYFVNMKISTDKSWQGVTIYFSGHDTP 174
>gi|297672153|ref|XP_002814174.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 1 [Pongo abelii]
Length = 1706
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 102/177 (57%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+HP D +D++ IF ++ LFRI++PRK+ +MA+DG
Sbjct: 28 EFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R RRFR++KE +KI +K + G
Sbjct: 88 VAPRAKMNQ-------------------QRGRRFRSAKEAEDKI-------KKAIEKGET 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP E + FDSNCITPGT FMA L L Y+++ +++ D W+G+ + S P
Sbjct: 122 LPTE----ARFDSNCITPGTEFMARLHEHLKYFVNMKISTDKSWQGVTIYFSGHETP 174
>gi|338714846|ref|XP_001917535.2| PREDICTED: 5'-3' exoribonuclease 1 [Equus caballus]
Length = 1726
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 102/177 (57%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+HP D +D++ IF ++ LFRI++PRK+ +MA+DG
Sbjct: 28 EFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R RRFR++KE +KI +K + G
Sbjct: 88 VAPRAKMNQ-------------------QRGRRFRSAKEAEDKI-------KKAIEKGET 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP E + FDSNCITPGT FMA L L Y+++ +++ D W+G+ + S P
Sbjct: 122 LPTE----ARFDSNCITPGTEFMARLHEHLKYFVNMKISTDKSWQGVTIYFSGHETP 174
>gi|297672155|ref|XP_002814175.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 2 [Pongo abelii]
Length = 1693
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 102/177 (57%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+HP D +D++ IF ++ LFRI++PRK+ +MA+DG
Sbjct: 28 EFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R RRFR++KE +KI +K + G
Sbjct: 88 VAPRAKMNQ-------------------QRGRRFRSAKEAEDKI-------KKAIEKGET 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP E + FDSNCITPGT FMA L L Y+++ +++ D W+G+ + S P
Sbjct: 122 LPTE----ARFDSNCITPGTEFMARLHEHLKYFVNMKISTDKSWQGVTIYFSGHETP 174
>gi|322812519|pdb|3PIE|A Chain A, Crystal Structure Of The 5'->3' Exoribonuclease Xrn1,
E178q Mutant
gi|322812520|pdb|3PIE|B Chain B, Crystal Structure Of The 5'->3' Exoribonuclease Xrn1,
E178q Mutant
gi|322812521|pdb|3PIE|C Chain C, Crystal Structure Of The 5'->3' Exoribonuclease Xrn1,
E178q Mutant
gi|322812522|pdb|3PIE|D Chain D, Crystal Structure Of The 5'->3' Exoribonuclease Xrn1,
E178q Mutant
gi|322812523|pdb|3PIF|A Chain A, Crystal Structure Of The 5'->3' Exoribonuclease Xrn1,
E178q Mutant In Complex With Manganese
gi|322812524|pdb|3PIF|B Chain B, Crystal Structure Of The 5'->3' Exoribonuclease Xrn1,
E178q Mutant In Complex With Manganese
gi|322812525|pdb|3PIF|C Chain C, Crystal Structure Of The 5'->3' Exoribonuclease Xrn1,
E178q Mutant In Complex With Manganese
gi|322812526|pdb|3PIF|D Chain D, Crystal Structure Of The 5'->3' Exoribonuclease Xrn1,
E178q Mutant In Complex With Manganese
Length = 1155
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 81/199 (40%), Positives = 107/199 (53%), Gaps = 43/199 (21%)
Query: 30 LPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPK--DEDEMMVAIF 87
+ Q ++G +IP EFDNLYLDMN I+H CTH + E+E+ IF
Sbjct: 17 ISQLIDGSQIP-----------EFDNLYLDMNSILHNCTHGDGSEVNSRLSEEEVYSKIF 65
Query: 88 ECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASK 147
ID LF ++P++ YMAIDGVAPRAKMNQ R+RRFR +
Sbjct: 66 SYIDHLFHTIKPKQTFYMAIDGVAPRAKMNQ-------------------QRARRFRTAM 106
Query: 148 ETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRL 207
+ + + +K + +G LP KG FDSN ITPGT FMA L+ L Y+IHD++
Sbjct: 107 DAEKAL-------QKAIENGDELP----KGEPFDSNAITPGTEFMAKLTENLKYFIHDKI 155
Query: 208 NNDPGWKGIKVILSDANVP 226
ND W+ +KVI S VP
Sbjct: 156 TNDTRWQNVKVIFSGHEVP 174
>gi|332232374|ref|XP_003265381.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 1 [Nomascus leucogenys]
Length = 1706
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 102/177 (57%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+HP D +D++ IF ++ LFRI++PRK+ +MA+DG
Sbjct: 28 EFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R RRFR++KE +KI +K + G
Sbjct: 88 VAPRAKMNQ-------------------QRGRRFRSAKEAEDKI-------KKAIEKGET 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP E + FDSNCITPGT FMA L L Y+++ +++ D W+G+ + S P
Sbjct: 122 LPTE----ARFDSNCITPGTEFMARLHEHLKYFVNMKISTDKSWQGVTIYFSGHETP 174
>gi|226294212|gb|EEH49632.1| 5'-3' exoribonuclease [Paracoccidioides brasiliensis Pb18]
Length = 1445
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 81/177 (45%), Positives = 109/177 (61%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPE-DKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFD LYLDMNGIIH CTH + D P + ED+M +AIF I+ L+ ++P+KL +MAIDG
Sbjct: 28 EFDCLYLDMNGIIHNCTHRDSDSPTFRMTEDKMFIAIFNYIEHLYGKIKPKKLFFMAIDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R+RRFR + + AEVA+ EK + G
Sbjct: 88 VAPRAKMNQ-------------------QRARRFRTAYD-----AEVAK--EKAIKQGIE 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
+P E + FDSNCITPGT FMA L+ L Y+I+ +++ D W+G++++LS VP
Sbjct: 122 MPKE----AAFDSNCITPGTEFMAKLTQQLKYFINKKVSEDVEWQGVEIVLSGHEVP 174
>gi|403304036|ref|XP_003942619.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 2 [Saimiri boliviensis
boliviensis]
Length = 1694
Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 102/177 (57%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+HP D +D++ IF ++ LFRI++PRK+ +MA+DG
Sbjct: 28 EFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R RRFR++KE +KI +K + G
Sbjct: 88 VAPRAKMNQ-------------------QRGRRFRSAKEAEDKI-------KKAIEKGET 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP E + FDSNCITPGT FMA L L Y+++ +++ D W+G+ + S P
Sbjct: 122 LPTE----ARFDSNCITPGTEFMARLHEHLKYFVNMKISTDKSWQGVTIYFSGHETP 174
>gi|332232376|ref|XP_003265382.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 2 [Nomascus leucogenys]
Length = 1693
Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 102/177 (57%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+HP D +D++ IF ++ LFRI++PRK+ +MA+DG
Sbjct: 28 EFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R RRFR++KE +KI +K + G
Sbjct: 88 VAPRAKMNQ-------------------QRGRRFRSAKEAEDKI-------KKAIEKGET 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP E + FDSNCITPGT FMA L L Y+++ +++ D W+G+ + S P
Sbjct: 122 LPTE----ARFDSNCITPGTEFMARLHEHLKYFVNMKISTDKSWQGVTIYFSGHETP 174
>gi|397607914|gb|EJK59848.1| hypothetical protein THAOC_19883 [Thalassiosira oceanica]
Length = 773
Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 86/176 (48%), Positives = 105/176 (59%), Gaps = 33/176 (18%)
Query: 54 DNLYLDMNGIIHPCTHP--EDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVA 111
DN YLDMNGIIHPCTH ED+ DE EM IF +DRL++IV+PRK+LY+A+DGVA
Sbjct: 91 DNFYLDMNGIIHPCTHGNNEDEITILDETEMFKKIFGYVDRLYKIVQPRKVLYLAVDGVA 150
Query: 112 PRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCILP 171
PRAKMNQ RSRRFR+SKE AEK+A R DG +
Sbjct: 151 PRAKMNQ-------------------QRSRRFRSSKE-AEKLAATILAR-----DGSL-- 183
Query: 172 PEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWK-GIKVILSDANVP 226
PE++ FDSNCITPGT FM L + +I + DP WK G V++S +VP
Sbjct: 184 PERDA---FDSNCITPGTDFMLKLGLAMRKWIEYKQQTDPAWKNGCDVVVSGPDVP 236
>gi|431899770|gb|ELK07717.1| 5'-3' exoribonuclease 1 [Pteropus alecto]
Length = 1742
Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 102/177 (57%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+HP D +D++ IF ++ LFRI++PRK+ +MA+DG
Sbjct: 28 EFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R RRFR++KE +KI +K + G
Sbjct: 88 VAPRAKMNQ-------------------QRGRRFRSAKEAEDKI-------KKAVEKGET 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP E + FDSNCITPGT FMA L L Y+++ +++ D W+G+ + S P
Sbjct: 122 LPTE----ARFDSNCITPGTEFMARLHEHLKYFVNLKISTDKSWQGVTIYFSGHETP 174
>gi|50312097|ref|XP_456080.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49645216|emb|CAG98788.1| KLLA0F22385p [Kluyveromyces lactis]
Length = 1453
Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 81/199 (40%), Positives = 107/199 (53%), Gaps = 43/199 (21%)
Query: 30 LPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPK--DEDEMMVAIF 87
+ Q ++G +IP EFDNLYLDMN I+H CTH + E+E+ IF
Sbjct: 17 ISQLIDGSQIP-----------EFDNLYLDMNSILHNCTHGDGSEVNSRLSEEEVYSKIF 65
Query: 88 ECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASK 147
ID LF ++P++ YMAIDGVAPRAKMNQ R+RRFR +
Sbjct: 66 SYIDHLFHTIKPKQTFYMAIDGVAPRAKMNQ-------------------QRARRFRTAM 106
Query: 148 ETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRL 207
+ + + +K + +G LP KG FDSN ITPGT FMA L+ L Y+IHD++
Sbjct: 107 DAEKAL-------QKAIENGDELP----KGEPFDSNAITPGTEFMAKLTENLKYFIHDKI 155
Query: 208 NNDPGWKGIKVILSDANVP 226
ND W+ +KVI S VP
Sbjct: 156 TNDTRWQNVKVIFSGHEVP 174
>gi|225684905|gb|EEH23189.1| 5'-3' exoribonuclease [Paracoccidioides brasiliensis Pb03]
Length = 1445
Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 81/177 (45%), Positives = 109/177 (61%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPE-DKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFD LYLDMNGIIH CTH + D P + ED+M +AIF I+ L+ ++P+KL +MAIDG
Sbjct: 28 EFDCLYLDMNGIIHNCTHRDSDSPTFRMTEDKMFIAIFNYIEHLYGKIKPKKLFFMAIDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R+RRFR + + AEVA+ EK + G
Sbjct: 88 VAPRAKMNQ-------------------QRARRFRTAYD-----AEVAK--EKAIKQGIE 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
+P E + FDSNCITPGT FMA L+ L Y+I+ +++ D W+G++++LS VP
Sbjct: 122 MPKE----AAFDSNCITPGTEFMAKLTQQLKYFINKKVSEDVEWQGVEIVLSGHEVP 174
>gi|425772513|gb|EKV10914.1| Exonuclease Kem1, putative [Penicillium digitatum PHI26]
Length = 1393
Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 80/177 (45%), Positives = 107/177 (60%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPE-DKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFD+LYLDMNGIIH CTH + D P + ED+M +AIF I+ LF ++P+KL YMA+DG
Sbjct: 28 EFDSLYLDMNGIIHNCTHSDSDSPTFRMTEDQMFIAIFNYIEHLFGKIKPKKLFYMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R+RRFR + + AE A +EK + G
Sbjct: 88 VAPRAKMNQ-------------------QRARRFRTALD-----AENA--KEKAIQQGLE 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
+P E FDSNCITPGT FM L+ L Y+I+ +++ D W+G++++LS VP
Sbjct: 122 MPKE----DAFDSNCITPGTEFMQKLTKQLKYFINKKISEDTDWQGVEIVLSGHEVP 174
>gi|326468946|gb|EGD92955.1| exonuclease [Trichophyton tonsurans CBS 112818]
Length = 1424
Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 80/177 (45%), Positives = 109/177 (61%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPE-DKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFD LYLDMNGIIH CTH + D P + ED+M +AIF I+ LF ++P++L +MAIDG
Sbjct: 28 EFDCLYLDMNGIIHNCTHKDSDSPTFRMTEDKMFIAIFNYIEHLFGKIKPKRLFFMAIDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R+RRFR + + AE+A+ E+ + +G
Sbjct: 88 VAPRAKMNQ-------------------QRARRFRTALD-----AELAK--ERAIKEGVE 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
+P E FDSNCITPGT FMA L+ L Y+I+ +++ D W+G++V+LS VP
Sbjct: 122 MPKE----DAFDSNCITPGTEFMAKLTKQLKYFINKKVSEDAEWQGVEVVLSGHEVP 174
>gi|154413474|ref|XP_001579767.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
gi|121913977|gb|EAY18781.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
Length = 710
Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 85/195 (43%), Positives = 112/195 (57%), Gaps = 29/195 (14%)
Query: 39 IPFDSSKPNPNGM---EFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFR 95
+ D + NPN + EFDNLY+DMNG+IH C HP D+ PK+ +E+ I + R+F
Sbjct: 26 VDVDPLESNPNTIGSQEFDNLYIDMNGLIHSCFHPADREQPKNIEEVYENIKLYLKRIFN 85
Query: 96 IVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA----E 151
IVRPRKLLY+AIDGVAPRAKMNQ RSRRFRA+K++ +
Sbjct: 86 IVRPRKLLYLAIDGVAPRAKMNQ-------------------QRSRRFRAAKDSEYNRNK 126
Query: 152 KIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDP 211
E+ + ++ A+ + E+ H DSN ITPGT FM LS L +I + N P
Sbjct: 127 NFQELITLGKQKEAEKIM--KEQYIQDH-DSNIITPGTKFMCDLSQILRSFISEMQNTSP 183
Query: 212 GWKGIKVILSDANVP 226
W I +ILSDA+VP
Sbjct: 184 AWSNIAIILSDASVP 198
>gi|326480075|gb|EGE04085.1| 5'-3' exoribonuclease [Trichophyton equinum CBS 127.97]
Length = 1424
Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 80/177 (45%), Positives = 109/177 (61%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPE-DKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFD LYLDMNGIIH CTH + D P + ED+M +AIF I+ LF ++P++L +MAIDG
Sbjct: 28 EFDCLYLDMNGIIHNCTHKDSDSPTFRMTEDKMFIAIFNYIEHLFGKIKPKRLFFMAIDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R+RRFR + + AE+A+ E+ + +G
Sbjct: 88 VAPRAKMNQ-------------------QRARRFRTALD-----AELAK--ERAIKEGVE 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
+P E FDSNCITPGT FMA L+ L Y+I+ +++ D W+G++V+LS VP
Sbjct: 122 MPKE----DAFDSNCITPGTEFMAKLTKQLKYFINKKVSEDAEWQGVEVVLSGHEVP 174
>gi|428182412|gb|EKX51273.1| hypothetical protein GUITHDRAFT_157234 [Guillardia theta CCMP2712]
Length = 252
Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 78/176 (44%), Positives = 103/176 (58%), Gaps = 32/176 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGV 110
EFDNLYLDMNGIIHPCTH D + E++M VAI + +D L ++VRP++LL++A+DG
Sbjct: 29 EFDNLYLDMNGIIHPCTHGNDGEVVRMTENDMFVAIGKFVDELMKVVRPQRLLFLAVDGC 88
Query: 111 APRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCIL 170
APRAKMNQ R RRFRA+ E ++ + E++ D
Sbjct: 89 APRAKMNQ-------------------QRQRRFRAASELSKSLMNARERGEEIPQDP--- 126
Query: 171 PPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
FDSNCITPGT FMA L+ L+Y+I ++ +DP W K+ILS A VP
Sbjct: 127 ---------FDSNCITPGTQFMARLTNFLNYFIQSKIKDDPIWAKAKIILSGAEVP 173
>gi|425774945|gb|EKV13236.1| Exonuclease Kem1, putative [Penicillium digitatum Pd1]
Length = 1393
Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 80/177 (45%), Positives = 107/177 (60%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPE-DKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFD+LYLDMNGIIH CTH + D P + ED+M +AIF I+ LF ++P+KL YMA+DG
Sbjct: 28 EFDSLYLDMNGIIHNCTHSDSDSPTFRMTEDQMFIAIFNYIEHLFGKIKPKKLFYMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R+RRFR + + AE A +EK + G
Sbjct: 88 VAPRAKMNQ-------------------QRARRFRTALD-----AENA--KEKAIQQGLE 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
+P E FDSNCITPGT FM L+ L Y+I+ +++ D W+G++++LS VP
Sbjct: 122 MPKE----DAFDSNCITPGTEFMQKLTKQLKYFINKKISEDTDWQGVEIVLSGHEVP 174
>gi|397512470|ref|XP_003826568.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 2 [Pan paniscus]
Length = 1693
Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 102/177 (57%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+HP D +D++ IF ++ LFRI++PRK+ +MA+DG
Sbjct: 28 EFDNLYLDMNGIIHHCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R RRFR++KE +KI +K + G
Sbjct: 88 VAPRAKMNQ-------------------QRGRRFRSAKEAEDKI-------KKAVEKGET 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP E + FDSNCITPGT FMA L L Y+++ +++ D W+G+ + S P
Sbjct: 122 LPTE----ARFDSNCITPGTEFMARLHEHLKYFVNMKISTDKSWQGVTIYFSGHETP 174
>gi|410266386|gb|JAA21159.1| 5'-3' exoribonuclease 1 [Pan troglodytes]
Length = 1706
Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 102/177 (57%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+HP D +D++ IF ++ LFRI++PRK+ +MA+DG
Sbjct: 28 EFDNLYLDMNGIIHHCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R RRFR++KE +KI +K + G
Sbjct: 88 VAPRAKMNQ-------------------QRGRRFRSAKEAEDKI-------KKAVEKGET 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP E + FDSNCITPGT FMA L L Y+++ +++ D W+G+ + S P
Sbjct: 122 LPTE----ARFDSNCITPGTEFMARLHEHLKYFVNMKISTDKSWQGVTIYFSGHETP 174
>gi|410266384|gb|JAA21158.1| 5'-3' exoribonuclease 1 [Pan troglodytes]
Length = 1693
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 102/177 (57%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+HP D +D++ IF ++ LFRI++PRK+ +MA+DG
Sbjct: 28 EFDNLYLDMNGIIHHCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R RRFR++KE +KI +K + G
Sbjct: 88 VAPRAKMNQ-------------------QRGRRFRSAKEAEDKI-------KKAVEKGET 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP E + FDSNCITPGT FMA L L Y+++ +++ D W+G+ + S P
Sbjct: 122 LPTE----ARFDSNCITPGTEFMARLHEHLKYFVNMKISTDKSWQGVTIYFSGHETP 174
>gi|298707210|emb|CBJ29957.1| 5'-3' exoribonuclease 1 [Ectocarpus siliculosus]
Length = 488
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 81/178 (45%), Positives = 102/178 (57%), Gaps = 33/178 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDK--PAPKDEDEMMVAIFECIDRLF-RIVRPRKLLYMAID 108
EFDNLYLDMNGI+H CTHP D A E ++++ IF IDR+ IVRPR++LYMAID
Sbjct: 29 EFDNLYLDMNGILHTCTHPNDDGLSAQLSERDIILGIFHYIDRIVTHIVRPRRVLYMAID 88
Query: 109 GVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGC 168
GVAPRAKMNQ RSRRFRA K+ E +A + +++ D
Sbjct: 89 GVAPRAKMNQ-------------------QRSRRFRARKDMQEA-KLIAESKGEVVDDTA 128
Query: 169 ILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
+ FDSNCITPGT FMA +S L Y++ ++ DP WK + V S VP
Sbjct: 129 V----------FDSNCITPGTEFMAKISRHLRYFVQKKITEDPLWKALTVTFSGHEVP 176
>gi|410341471|gb|JAA39682.1| 5'-3' exoribonuclease 1 [Pan troglodytes]
Length = 1693
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 102/177 (57%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+HP D +D++ IF ++ LFRI++PRK+ +MA+DG
Sbjct: 28 EFDNLYLDMNGIIHHCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R RRFR++KE +KI +K + G
Sbjct: 88 VAPRAKMNQ-------------------QRGRRFRSAKEAEDKI-------KKAVEKGET 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP E + FDSNCITPGT FMA L L Y+++ +++ D W+G+ + S P
Sbjct: 122 LPTE----ARFDSNCITPGTEFMARLHEHLKYFVNMKISTDKSWQGVTIYFSGHETP 174
>gi|397512468|ref|XP_003826567.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 1 [Pan paniscus]
Length = 1705
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 102/177 (57%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+HP D +D++ IF ++ LFRI++PRK+ +MA+DG
Sbjct: 28 EFDNLYLDMNGIIHHCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R RRFR++KE +KI +K + G
Sbjct: 88 VAPRAKMNQ-------------------QRGRRFRSAKEAEDKI-------KKAVEKGET 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP E + FDSNCITPGT FMA L L Y+++ +++ D W+G+ + S P
Sbjct: 122 LPTE----ARFDSNCITPGTEFMARLHEHLKYFVNMKISTDKSWQGVTIYFSGHETP 174
>gi|357624452|gb|EHJ75231.1| putative 5-3 exoribonuclease 1 [Danaus plexippus]
Length = 730
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 83/177 (46%), Positives = 108/177 (61%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPED-KPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
+FDN+YLDMNGIIH C+HP+D P + E+++ IF I LF+I++P+KL +MAIDG
Sbjct: 28 DFDNMYLDMNGIIHNCSHPDDSNPHFRITEEKIFKDIFHYISILFQIIKPKKLFFMAIDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R RRFR+++E AEK+ E A+ + G
Sbjct: 88 VAPRAKMNQ-------------------QRGRRFRSARE-AEKLEETAKEK------GEA 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP EK FDSNCITPGT FMA L L Y+I ++++ DP W +KVILS P
Sbjct: 122 LPTEKR----FDSNCITPGTVFMARLHEQLKYFIKEKISTDPLWSKVKVILSGHETP 174
>gi|346974250|gb|EGY17702.1| 5'-3' exoribonuclease [Verticillium dahliae VdLs.17]
Length = 1404
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 83/178 (46%), Positives = 103/178 (57%), Gaps = 33/178 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHP---EDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAID 108
EFD LYLDMNGIIH CTH ED E+EM + IF I+ LF ++P+KL YMAID
Sbjct: 28 EFDALYLDMNGIIHNCTHKDAGEDATFRLSEEEMFIRIFNYIEHLFGKIKPKKLFYMAID 87
Query: 109 GVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGC 168
GVAPRAKMNQ RSRRFR + + AE A REK + DG
Sbjct: 88 GVAPRAKMNQ-------------------QRSRRFRTALD-----AENA--REKAIKDGV 121
Query: 169 ILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
+P E + FDSNCITPGT FMA LS L Y+++ ++ D W+ +++LS VP
Sbjct: 122 EMPKE----APFDSNCITPGTEFMAKLSRQLKYFVNKKVTEDADWQECEIVLSGHEVP 175
>gi|332818029|ref|XP_516791.3| PREDICTED: 5'-3' exoribonuclease 1 isoform 2 [Pan troglodytes]
Length = 1692
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 102/177 (57%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+HP D +D++ IF ++ LFRI++PRK+ +MA+DG
Sbjct: 28 EFDNLYLDMNGIIHHCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R RRFR++KE +KI +K + G
Sbjct: 88 VAPRAKMNQ-------------------QRGRRFRSAKEAEDKI-------KKAVEKGET 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP E + FDSNCITPGT FMA L L Y+++ +++ D W+G+ + S P
Sbjct: 122 LPTE----ARFDSNCITPGTEFMARLHEHLKYFVNMKISTDKSWQGVTIYFSGHETP 174
>gi|114589588|ref|XP_001161640.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 1 [Pan troglodytes]
Length = 1705
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 102/177 (57%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+HP D +D++ IF ++ LFRI++PRK+ +MA+DG
Sbjct: 28 EFDNLYLDMNGIIHHCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R RRFR++KE +KI +K + G
Sbjct: 88 VAPRAKMNQ-------------------QRGRRFRSAKEAEDKI-------KKAVEKGET 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP E + FDSNCITPGT FMA L L Y+++ +++ D W+G+ + S P
Sbjct: 122 LPTE----ARFDSNCITPGTEFMARLHEHLKYFVNMKISTDKSWQGVTIYFSGHETP 174
>gi|291220730|ref|XP_002730377.1| PREDICTED: rCG25308-like [Saccoglossus kowalevskii]
Length = 2104
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 105/177 (59%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHP-EDKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNG+IH C+HP +D P + E+++ IF I+ LFRI++PRK+ +MA+DG
Sbjct: 28 EFDNLYLDMNGVIHVCSHPNDDDPHFRISEEKIFKDIFHYIEVLFRIIKPRKVFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R RRFR+++ E+ +K L+ G
Sbjct: 88 VAPRAKMNQ-------------------QRGRRFRSARAAEEQ-------EKKALSKGET 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP EK FDSNCITPGT FM L+ L Y+++ ++ D W+G+++ LS P
Sbjct: 122 LPTEKR----FDSNCITPGTEFMVKLNEQLKYFVNKKITEDEMWRGLRIYLSGHETP 174
>gi|405973506|gb|EKC38214.1| 5'-3' exoribonuclease 1 [Crassostrea gigas]
Length = 1857
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 81/177 (45%), Positives = 104/177 (58%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPED-KPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+HPED P + E+++ IF ++ LFR+++PRK+ +MAIDG
Sbjct: 28 EFDNLYLDMNGIIHVCSHPEDDNPHFRITEEKIFKDIFHYLEFLFRMIKPRKVFFMAIDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R RRFR+++E AE + AR G
Sbjct: 88 VAPRAKMNQ-------------------QRGRRFRSARE-AEALERKAR------ESGET 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP EK FDSNCITPGT FM L L Y++ ++++DP W G+ V LS P
Sbjct: 122 LPTEK----RFDSNCITPGTEFMVKLHEQLKYFVTSKISSDPLWHGVDVYLSGHETP 174
>gi|302416751|ref|XP_003006207.1| 5'-3' exoribonuclease [Verticillium albo-atrum VaMs.102]
gi|261355623|gb|EEY18051.1| 5'-3' exoribonuclease [Verticillium albo-atrum VaMs.102]
Length = 1383
Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 83/178 (46%), Positives = 103/178 (57%), Gaps = 33/178 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHP---EDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAID 108
EFD LYLDMNGIIH CTH ED E+EM + IF I+ LF ++P+KL YMAID
Sbjct: 28 EFDALYLDMNGIIHNCTHKDAGEDATFRLSEEEMFIRIFNYIEHLFGKIKPKKLFYMAID 87
Query: 109 GVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGC 168
GVAPRAKMNQ RSRRFR + + AE A REK + DG
Sbjct: 88 GVAPRAKMNQ-------------------QRSRRFRTALD-----AENA--REKAIKDGV 121
Query: 169 ILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
+P E + FDSNCITPGT FMA LS L Y+++ ++ D W+ +++LS VP
Sbjct: 122 EMPKE----APFDSNCITPGTEFMAKLSRQLKYFVNKKVTEDADWQECEIVLSGHEVP 175
>gi|34365218|emb|CAE45950.1| hypothetical protein [Homo sapiens]
Length = 1706
Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 103/177 (58%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHP--EDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+HP +D +D++ IF ++ LFRI++PRK+ +MA+DG
Sbjct: 28 EFDNLYLDMNGIIHQCSHPNGDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R RRFR++KE +KI +K + G
Sbjct: 88 VAPRAKMNQ-------------------QRGRRFRSAKEAEDKI-------KKAIEKGET 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP E + FDSNCITPGT FMA L L Y+++ +++ D W+G+ + S P
Sbjct: 122 LPTE----ARFDSNCITPGTEFMARLHEHLKYFVNMKISTDKSWQGVTIYFSGHETP 174
>gi|296227918|ref|XP_002759572.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 1 [Callithrix jacchus]
Length = 1694
Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 102/177 (57%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+HP D +D++ IF ++ LFRI++PRK+ +MA+DG
Sbjct: 28 EFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R RRFR++KE +KI +K + G
Sbjct: 88 VAPRAKMNQ-------------------QRGRRFRSAKEAEDKI-------KKAIEKGET 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP E + FDSNCITPGT FMA L L Y+++ +++ D W+G+ + S P
Sbjct: 122 LPTE----ARFDSNCITPGTEFMARLHEHLKYFVNMKISMDKSWQGVTIYFSGHETP 174
>gi|296227920|ref|XP_002759573.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 2 [Callithrix jacchus]
Length = 1706
Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 102/177 (57%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+HP D +D++ IF ++ LFRI++PRK+ +MA+DG
Sbjct: 28 EFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R RRFR++KE +KI +K + G
Sbjct: 88 VAPRAKMNQ-------------------QRGRRFRSAKEAEDKI-------KKAIEKGET 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP E + FDSNCITPGT FMA L L Y+++ +++ D W+G+ + S P
Sbjct: 122 LPTE----ARFDSNCITPGTEFMARLHEHLKYFVNMKISMDKSWQGVTIYFSGHETP 174
>gi|145347657|ref|XP_001418279.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578508|gb|ABO96572.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 509
Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 90/198 (45%), Positives = 107/198 (54%), Gaps = 43/198 (21%)
Query: 30 LPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHP--EDKPAPKDEDEMMVAIF 87
L QE+ G +IP DNLYLDMNG+IH C+H D EDEMM +F
Sbjct: 17 LQQEIAGNQIP-----------GIDNLYLDMNGVIHNCSHGAGTDVNTRMTEDEMMSKVF 65
Query: 88 ECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASK 147
+D LFR+ RP K+LYMAIDGVAPRAKMNQ RSRRFR++
Sbjct: 66 AYLDHLFRMTRPNKMLYMAIDGVAPRAKMNQ-------------------QRSRRFRSA- 105
Query: 148 ETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRL 207
AE A+ RE+ A G PE E G FDSNCITPGT FMA L+ L +Y+ +
Sbjct: 106 ------AEAAKDREEARARG---EPEPE-GEPFDSNCITPGTEFMARLTEHLKFYVRKKQ 155
Query: 208 NNDPGWKGIKVILSDANV 225
DP W + VILS V
Sbjct: 156 TEDPLWAKVTVILSGHEV 173
>gi|365765775|gb|EHN07281.1| Kem1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 1528
Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 80/197 (40%), Positives = 108/197 (54%), Gaps = 43/197 (21%)
Query: 32 QEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPK--DEDEMMVAIFEC 89
Q + G +IP EFDNLYLDMN I+H CTH D K E+E+ I
Sbjct: 19 QLIEGTQIP-----------EFDNLYLDMNSILHNCTHGNDDDVTKRLTEEEVFAKICTY 67
Query: 90 IDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKET 149
ID LF+ ++P+K+ YMAIDGVAPRAKMNQ R+RRFR + +
Sbjct: 68 IDHLFQTIKPKKIFYMAIDGVAPRAKMNQ-------------------QRARRFRTAMDA 108
Query: 150 AEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNN 209
+ + +K + +G +P KG FDSN ITPGT FMA L+ L Y+IHD+++N
Sbjct: 109 EKAL-------KKAIENGDEIP----KGEPFDSNSITPGTEFMAKLTKNLQYFIHDKISN 157
Query: 210 DPGWKGIKVILSDANVP 226
D W+ +++I S VP
Sbjct: 158 DSKWREVQIIFSGHEVP 174
>gi|349578059|dbj|GAA23225.1| K7_Kem1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 1528
Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 80/197 (40%), Positives = 108/197 (54%), Gaps = 43/197 (21%)
Query: 32 QEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPK--DEDEMMVAIFEC 89
Q + G +IP EFDNLYLDMN I+H CTH D K E+E+ I
Sbjct: 19 QLIEGTQIP-----------EFDNLYLDMNSILHNCTHGNDDDVTKRLTEEEVFAKICTY 67
Query: 90 IDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKET 149
ID LF+ ++P+K+ YMAIDGVAPRAKMNQ R+RRFR + +
Sbjct: 68 IDHLFQTIKPKKIFYMAIDGVAPRAKMNQ-------------------QRARRFRTAMDA 108
Query: 150 AEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNN 209
+ + +K + +G +P KG FDSN ITPGT FMA L+ L Y+IHD+++N
Sbjct: 109 EKAL-------KKAIENGDEIP----KGEPFDSNSITPGTEFMAKLTKNLQYFIHDKISN 157
Query: 210 DPGWKGIKVILSDANVP 226
D W+ +++I S VP
Sbjct: 158 DSKWREVQIIFSGHEVP 174
>gi|151943641|gb|EDN61951.1| 5'-3'-exonuclease [Saccharomyces cerevisiae YJM789]
Length = 1528
Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 80/197 (40%), Positives = 108/197 (54%), Gaps = 43/197 (21%)
Query: 32 QEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPK--DEDEMMVAIFEC 89
Q + G +IP EFDNLYLDMN I+H CTH D K E+E+ I
Sbjct: 19 QLIEGTQIP-----------EFDNLYLDMNSILHNCTHGNDDDVTKRLTEEEVFAKICTY 67
Query: 90 IDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKET 149
ID LF+ ++P+K+ YMAIDGVAPRAKMNQ R+RRFR + +
Sbjct: 68 IDHLFQTIKPKKIFYMAIDGVAPRAKMNQ-------------------QRARRFRTAMDA 108
Query: 150 AEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNN 209
+ + +K + +G +P KG FDSN ITPGT FMA L+ L Y+IHD+++N
Sbjct: 109 EKAL-------KKAIENGDEIP----KGEPFDSNSITPGTEFMAKLTKNLQYFIHDKISN 157
Query: 210 DPGWKGIKVILSDANVP 226
D W+ +++I S VP
Sbjct: 158 DSKWREVQIIFSGHEVP 174
>gi|6321265|ref|NP_011342.1| Xrn1p [Saccharomyces cerevisiae S288c]
gi|125342|sp|P22147.1|XRN1_YEAST RecName: Full=5'-3' exoribonuclease 1; AltName: Full=DNA strand
transfer protein beta; Short=STP-beta; AltName:
Full=KAR(-)-enhancing mutation protein; AltName:
Full=Strand exchange protein 1; AltName: Full=p175
gi|3847|emb|CAA38520.1| KEM1 protein [Saccharomyces cerevisiae]
gi|4413|emb|CAA43487.1| RAR5 [Saccharomyces cerevisiae]
gi|172580|gb|AAA35036.1| strand exchange protein 1 [Saccharomyces cerevisiae]
gi|172775|gb|AAA35125.1| DNA strand transferase beta [Saccharomyces cerevisiae]
gi|173192|gb|AAA35219.1| 5'-3' exoribonuclease [Saccharomyces cerevisiae]
gi|695728|emb|CAA59180.1| DNA strand transferase, exoribonuclease [Saccharomyces cerevisiae]
gi|1322778|emb|CAA96885.1| KEM1 [Saccharomyces cerevisiae]
gi|285812040|tpg|DAA07940.1| TPA: Xrn1p [Saccharomyces cerevisiae S288c]
gi|392299577|gb|EIW10671.1| Kem1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 1528
Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 80/197 (40%), Positives = 108/197 (54%), Gaps = 43/197 (21%)
Query: 32 QEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPK--DEDEMMVAIFEC 89
Q + G +IP EFDNLYLDMN I+H CTH D K E+E+ I
Sbjct: 19 QLIEGTQIP-----------EFDNLYLDMNSILHNCTHGNDDDVTKRLTEEEVFAKICTY 67
Query: 90 IDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKET 149
ID LF+ ++P+K+ YMAIDGVAPRAKMNQ R+RRFR + +
Sbjct: 68 IDHLFQTIKPKKIFYMAIDGVAPRAKMNQ-------------------QRARRFRTAMDA 108
Query: 150 AEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNN 209
+ + +K + +G +P KG FDSN ITPGT FMA L+ L Y+IHD+++N
Sbjct: 109 EKAL-------KKAIENGDEIP----KGEPFDSNSITPGTEFMAKLTKNLQYFIHDKISN 157
Query: 210 DPGWKGIKVILSDANVP 226
D W+ +++I S VP
Sbjct: 158 DSKWREVQIIFSGHEVP 174
>gi|256272237|gb|EEU07228.1| Kem1p [Saccharomyces cerevisiae JAY291]
Length = 1528
Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 80/197 (40%), Positives = 108/197 (54%), Gaps = 43/197 (21%)
Query: 32 QEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPK--DEDEMMVAIFEC 89
Q + G +IP EFDNLYLDMN I+H CTH D K E+E+ I
Sbjct: 19 QLIEGTQIP-----------EFDNLYLDMNSILHNCTHGNDDDVTKRLTEEEVFAKICTY 67
Query: 90 IDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKET 149
ID LF+ ++P+K+ YMAIDGVAPRAKMNQ R+RRFR + +
Sbjct: 68 IDHLFQTIKPKKIFYMAIDGVAPRAKMNQ-------------------QRARRFRTAMDA 108
Query: 150 AEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNN 209
+ + +K + +G +P KG FDSN ITPGT FMA L+ L Y+IHD+++N
Sbjct: 109 EKAL-------KKAIENGDEIP----KGEPFDSNSITPGTEFMAKLTKNLQYFIHDKISN 157
Query: 210 DPGWKGIKVILSDANVP 226
D W+ +++I S VP
Sbjct: 158 DSKWREVQIIFSGHEVP 174
>gi|190407116|gb|EDV10383.1| 5'-3' exonuclease [Saccharomyces cerevisiae RM11-1a]
gi|259146337|emb|CAY79594.1| Kem1p [Saccharomyces cerevisiae EC1118]
Length = 1528
Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 80/197 (40%), Positives = 108/197 (54%), Gaps = 43/197 (21%)
Query: 32 QEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPK--DEDEMMVAIFEC 89
Q + G +IP EFDNLYLDMN I+H CTH D K E+E+ I
Sbjct: 19 QLIEGTQIP-----------EFDNLYLDMNSILHNCTHGNDDDVTKRLTEEEVFAKICTY 67
Query: 90 IDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKET 149
ID LF+ ++P+K+ YMAIDGVAPRAKMNQ R+RRFR + +
Sbjct: 68 IDHLFQTIKPKKIFYMAIDGVAPRAKMNQ-------------------QRARRFRTAMDA 108
Query: 150 AEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNN 209
+ + +K + +G +P KG FDSN ITPGT FMA L+ L Y+IHD+++N
Sbjct: 109 EKAL-------KKAIENGDEIP----KGEPFDSNSITPGTEFMAKLTKNLQYFIHDKISN 157
Query: 210 DPGWKGIKVILSDANVP 226
D W+ +++I S VP
Sbjct: 158 DSKWREVQIIFSGHEVP 174
>gi|448526146|ref|XP_003869280.1| Kem1 5'-->3' exoribonuclease [Candida orthopsilosis Co 90-125]
gi|380353633|emb|CCG23144.1| Kem1 5'-->3' exoribonuclease [Candida orthopsilosis]
Length = 1465
Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 79/176 (44%), Positives = 100/176 (56%), Gaps = 31/176 (17%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGV 110
EFDNLYLDMN I+H CTH D + +D+M AIF ID LF I++P+K YMAIDGV
Sbjct: 28 EFDNLYLDMNSILHTCTHSNDGSITRISDDQMYAAIFNYIDHLFSIIKPKKTFYMAIDGV 87
Query: 111 APRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCIL 170
APRAKMNQ R+RRFR + E AE+ +K + +G L
Sbjct: 88 APRAKMNQ-------------------QRARRFRTAYE-----AEIN--LKKAIENGDEL 121
Query: 171 PPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
P E FDSN ITPGT FMA L+ L Y++H ++ D W I+++LS VP
Sbjct: 122 PKE----DPFDSNSITPGTEFMAKLTENLKYFVHKKITEDSRWANIEIVLSGHEVP 173
>gi|363756508|ref|XP_003648470.1| hypothetical protein Ecym_8383 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891670|gb|AET41653.1| Hypothetical protein Ecym_8383 [Eremothecium cymbalariae
DBVPG#7215]
Length = 1479
Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 77/177 (43%), Positives = 102/177 (57%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAPK--DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFD LYLDMN I+H CTH D K E+E+ + IF ID LFR ++P+++ YMAIDG
Sbjct: 28 EFDTLYLDMNSILHTCTHGNDADVTKRLSEEEVYLKIFTYIDHLFRTIKPKEVFYMAIDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ RSRRFR + + + + +K + +G
Sbjct: 88 VAPRAKMNQ-------------------QRSRRFRTAMDAEKAL-------KKAIENGEE 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
+P G FDSNCITPGT FMA L+ L Y+IH+++++D W+ VILS VP
Sbjct: 122 IP----SGEPFDSNCITPGTEFMAKLTKNLKYFIHEKISSDSLWRQANVILSGHEVP 174
>gi|354545919|emb|CCE42648.1| hypothetical protein CPAR2_202910 [Candida parapsilosis]
Length = 1481
Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 79/176 (44%), Positives = 100/176 (56%), Gaps = 31/176 (17%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGV 110
EFDNLYLDMN I+H CTH D + +D+M AIF ID LF I++P+K YMAIDGV
Sbjct: 28 EFDNLYLDMNSILHTCTHSNDGSITRISDDQMYAAIFNYIDHLFSIIKPKKTFYMAIDGV 87
Query: 111 APRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCIL 170
APRAKMNQ R+RRFR + E AE+ +K + +G L
Sbjct: 88 APRAKMNQ-------------------QRARRFRTAYE-----AEIN--LKKAIENGDEL 121
Query: 171 PPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
P E FDSN ITPGT FMA L+ L Y++H ++ D W I+++LS VP
Sbjct: 122 PKE----DPFDSNSITPGTEFMAKLTENLKYFVHKKITEDSRWANIEIVLSGHEVP 173
>gi|55726904|emb|CAH90211.1| hypothetical protein [Pongo abelii]
Length = 402
Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 102/177 (57%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+HP D +D++ IF ++ LFRI++PRK+ +MA+DG
Sbjct: 28 EFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R RRFR++KE +KI +K + G
Sbjct: 88 VAPRAKMNQ-------------------QRGRRFRSAKEAEDKI-------KKAIEKGET 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP E + FDSNCITPGT FMA L L Y+++ +++ D W+G+ + S P
Sbjct: 122 LPTE----ARFDSNCITPGTEFMARLHEHLKYFVNMKISTDKSWQGVTIYFSGHETP 174
>gi|255955773|ref|XP_002568639.1| Pc21g16320 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211590350|emb|CAP96529.1| Pc21g16320 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1390
Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 80/177 (45%), Positives = 107/177 (60%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPE-DKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFD+LYLDMNGIIH CTH + D P + ED+M +AIF I+ LF ++P+KL YMA+DG
Sbjct: 28 EFDSLYLDMNGIIHNCTHSDSDSPTFRMTEDQMFIAIFNYIEHLFGKIKPKKLFYMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R+RRFR + + AE A +EK + G
Sbjct: 88 VAPRAKMNQ-------------------QRARRFRTALD-----AENA--KEKAIQQGLE 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
+P E FDSNCITPGT FM L+ L Y+I+ +++ D W+G++++LS VP
Sbjct: 122 MPKEDP----FDSNCITPGTEFMQKLTKQLKYFINKKISEDTDWQGVEIVLSGHEVP 174
>gi|169615619|ref|XP_001801225.1| hypothetical protein SNOG_10969 [Phaeosphaeria nodorum SN15]
gi|111060348|gb|EAT81468.1| hypothetical protein SNOG_10969 [Phaeosphaeria nodorum SN15]
Length = 1439
Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 80/177 (45%), Positives = 107/177 (60%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTH--PEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFD LYLDMNGIIH CTH + A K ED+M + IF I+ LF ++P++L +MAIDG
Sbjct: 28 EFDCLYLDMNGIIHNCTHNDSDGATARKSEDQMFLDIFNYIEHLFGKIKPKQLFFMAIDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R+RRFR + + AEK R+K + +G
Sbjct: 88 VAPRAKMNQ-------------------QRARRFRTALD-AEKA------RDKAIREGVE 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
+P E+ FDSNCITPGT FMA L+ L Y+I+ +++ D W+G++V+LS VP
Sbjct: 122 MPKEEA----FDSNCITPGTAFMAKLTQQLKYFINKKVSEDMDWQGVEVVLSGHEVP 174
>gi|378727731|gb|EHY54190.1| phosphodiesterase/alkaline phosphatase D [Exophiala dermatitidis
NIH/UT8656]
Length = 1413
Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 79/177 (44%), Positives = 105/177 (59%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPE-DKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFD LYLDMNGIIH CTH + D P + E++M +AIF I+ LF ++P+KL +MAIDG
Sbjct: 28 EFDCLYLDMNGIIHNCTHKDSDSPTFRMTEEKMFIAIFNYIEHLFGKIKPKKLFFMAIDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R+RRFR + + + REK + +G
Sbjct: 88 VAPRAKMNQ-------------------QRARRFRTA-------LDAEKAREKAIKEGLE 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
+P E FDSNCITPGT FMA L+ L Y+I +++ D W+G++V+LS VP
Sbjct: 122 MPKE----DPFDSNCITPGTEFMAKLTKQLKYFISKKVSEDVDWQGVEVVLSGHEVP 174
>gi|426342416|ref|XP_004037841.1| PREDICTED: 5'-3' exoribonuclease 1-like [Gorilla gorilla gorilla]
Length = 1432
Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 75/177 (42%), Positives = 102/177 (57%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+HP D +D++ IF ++ LFRI++PRK+ +MA+DG
Sbjct: 28 EFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R RRFR++KE +K+ +K + G
Sbjct: 88 VAPRAKMNQ-------------------QRGRRFRSAKEAEDKM-------KKAIEKGET 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP E + FDSNCITPGT FMA L L Y+++ +++ D W+G+ + S P
Sbjct: 122 LPTE----ARFDSNCITPGTEFMARLHEHLKYFVNMKISTDKSWQGVTIYFSGHETP 174
>gi|315049287|ref|XP_003174018.1| hypothetical protein MGYG_04190 [Arthroderma gypseum CBS 118893]
gi|311341985|gb|EFR01188.1| hypothetical protein MGYG_04190 [Arthroderma gypseum CBS 118893]
Length = 1424
Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 79/177 (44%), Positives = 109/177 (61%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPE-DKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFD LYLDMNGIIH CTH + D P + ED+M +AIF I+ LF ++P++L +MAIDG
Sbjct: 28 EFDCLYLDMNGIIHNCTHKDSDSPTFRMTEDKMFIAIFNYIEHLFGKIKPKRLFFMAIDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R+RRFR + + AE+A+ E+ + +G
Sbjct: 88 VAPRAKMNQ-------------------QRARRFRTALD-----AELAK--ERAIKEGIE 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
+P E FDSNCITPGT FMA L+ L Y+++ +++ D W+G++V+LS VP
Sbjct: 122 MPKE----DAFDSNCITPGTEFMAKLTKQLKYFVNKKVSEDAEWQGVEVVLSGHEVP 174
>gi|240277600|gb|EER41108.1| exonuclease II Exo2 [Ajellomyces capsulatus H143]
Length = 1138
Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 79/177 (44%), Positives = 109/177 (61%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPE-DKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFD LYLDMNGIIH CTH + D P + ED+M +AIF I+ L+ ++P++L +MAIDG
Sbjct: 28 EFDCLYLDMNGIIHNCTHKDSDSPTFRMTEDKMFIAIFNYIEHLYGKIKPKQLFFMAIDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R+RRFR + + AE+A+ EK + G
Sbjct: 88 VAPRAKMNQ-------------------QRARRFRTALD-----AELAK--EKAIKQGIE 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
+P E+ FDSNCITPGT FMA L+ L Y+I+ +++ D W+G++++LS VP
Sbjct: 122 MPKEEA----FDSNCITPGTEFMAKLTQQLKYFINKKVSEDVEWQGVEIVLSGHEVP 174
>gi|325093685|gb|EGC46995.1| exonuclease II Exo2 [Ajellomyces capsulatus H88]
Length = 1451
Score = 142 bits (359), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 79/177 (44%), Positives = 109/177 (61%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPE-DKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFD LYLDMNGIIH CTH + D P + ED+M +AIF I+ L+ ++P++L +MAIDG
Sbjct: 28 EFDCLYLDMNGIIHNCTHKDSDSPTFRMTEDKMFIAIFNYIEHLYGKIKPKQLFFMAIDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R+RRFR + + AE+A+ EK + G
Sbjct: 88 VAPRAKMNQ-------------------QRARRFRTALD-----AELAK--EKAIKQGIE 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
+P E+ FDSNCITPGT FMA L+ L Y+I+ +++ D W+G++++LS VP
Sbjct: 122 MPKEEA----FDSNCITPGTEFMAKLTQQLKYFINKKVSEDVEWQGVEIVLSGHEVP 174
>gi|225557050|gb|EEH05337.1| exonuclease [Ajellomyces capsulatus G186AR]
Length = 1454
Score = 142 bits (359), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 79/177 (44%), Positives = 109/177 (61%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPE-DKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFD LYLDMNGIIH CTH + D P + ED+M +AIF I+ L+ ++P++L +MAIDG
Sbjct: 28 EFDCLYLDMNGIIHNCTHKDSDSPTFRMTEDKMFIAIFNYIEHLYGKIKPKQLFFMAIDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R+RRFR + + AE+A+ EK + G
Sbjct: 88 VAPRAKMNQ-------------------QRARRFRTALD-----AELAK--EKAIKQGIE 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
+P E+ FDSNCITPGT FMA L+ L Y+I+ +++ D W+G++++LS VP
Sbjct: 122 MPKEEA----FDSNCITPGTEFMAKLTQQLKYFINKKVSEDVEWQGVEIVLSGHEVP 174
>gi|340959829|gb|EGS21010.1| 5'-3' exoribonuclease 1-like protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 1461
Score = 142 bits (359), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 81/177 (45%), Positives = 104/177 (58%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPE--DKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFD LYLDMNGIIH CTH + D E+EM +AIF I+ LF ++P+KL +MA+DG
Sbjct: 28 EFDCLYLDMNGIIHNCTHKDVDDVHFRLTEEEMFIAIFNYIEHLFGKIKPKKLFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R+RRFR + + R REK L +G
Sbjct: 88 VAPRAKMNQ-------------------QRARRFRTA-------LDAERAREKALREGKE 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP E+ FDSNCITPGT FMA LS L Y+I+ +++ D W+G +++LS VP
Sbjct: 122 LPKEEP----FDSNCITPGTEFMAKLSLQLKYFINKKVSEDRDWQGPEIVLSGHEVP 174
>gi|449018780|dbj|BAM82182.1| exonuclease [Cyanidioschyzon merolae strain 10D]
Length = 829
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/177 (47%), Positives = 97/177 (54%), Gaps = 30/177 (16%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP-KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGV 110
EFDN YLDMNGIIH CTH D DE EM IF DRL+RIV+PRK L++A+DGV
Sbjct: 26 EFDNFYLDMNGIIHTCTHNNDGDIIFLDEVEMFARIFAYTDRLYRIVKPRKFLFLAVDGV 85
Query: 111 APRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCIL 170
APRAKMNQ RSRRFR++KE +AE I L DG I
Sbjct: 86 APRAKMNQ-------------------QRSRRFRSAKEAERVLAEA--IARGDLEDGFI- 123
Query: 171 PPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWK-GIKVILSDANVP 226
FDSNCITPGT FM LS +I ++ ND W+ G KV+ S VP
Sbjct: 124 ------EERFDSNCITPGTAFMDRLSQAFREWIDYKMRNDRAWQTGCKVVFSGPEVP 174
>gi|401842124|gb|EJT44395.1| XRN1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 1526
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/197 (42%), Positives = 108/197 (54%), Gaps = 43/197 (21%)
Query: 32 QEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPK--DEDEMMVAIFEC 89
Q + G +IP EFDNLYLDMN I+H CTH D K E+E+ I
Sbjct: 19 QLIEGTQIP-----------EFDNLYLDMNSILHNCTHGNDDDVTKRLTEEEVFAKICTY 67
Query: 90 IDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKET 149
ID LF+ ++P K+ YMAIDGVAPRAKMNQ R+RRFR + +
Sbjct: 68 IDHLFQTIKPNKIFYMAIDGVAPRAKMNQ-------------------QRARRFRTAMD- 107
Query: 150 AEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNN 209
AEK + K + +G +P KG FDSN ITPGT FMA L+ L Y+IHD+++N
Sbjct: 108 AEKAMK------KAIENGDEIP----KGEPFDSNSITPGTEFMAKLTKNLQYFIHDKISN 157
Query: 210 DPGWKGIKVILSDANVP 226
D W+ +++I S VP
Sbjct: 158 DSKWREVQIIFSGHEVP 174
>gi|160331478|ref|XP_001712446.1| dhm [Hemiselmis andersenii]
gi|159765894|gb|ABW98121.1| dhm [Hemiselmis andersenii]
Length = 553
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/176 (47%), Positives = 98/176 (55%), Gaps = 30/176 (17%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVA 111
EFD YLDMNGIIH C+ E K + E+E+ IF D LFRIVRPRKL+Y+AIDGVA
Sbjct: 26 EFDCFYLDMNGIIHNCSQKEQKDNIQTEEELFQKIFSYTDHLFRIVRPRKLIYLAIDGVA 85
Query: 112 PRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCILP 171
PRAKMNQ RSRRFR+ KE EKI V KL
Sbjct: 86 PRAKMNQ-------------------QRSRRFRSVKE-LEKIKTVVNETSKL-------- 117
Query: 172 PEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGW-KGIKVILSDANVP 226
K + S FDSNCITPGT FM LS ++ +++ DP W +G VI S + VP
Sbjct: 118 -SKNEISFFDSNCITPGTEFMKNLSFSFKKWLENKIKFDPEWQQGCDVIFSGSEVP 172
>gi|405120875|gb|AFR95645.1| exonuclease II Exo2 [Cryptococcus neoformans var. grubii H99]
Length = 1448
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/173 (47%), Positives = 104/173 (60%), Gaps = 34/173 (19%)
Query: 58 LDMNGIIHPCTHP---EDKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPR 113
LDMNGIIH C+HP E+ P + E++M++AIF ID LF ++P+K+ +MAIDGVAPR
Sbjct: 23 LDMNGIIHNCSHPPSSENDPHFRITEEQMILAIFAYIDHLFTKIKPQKVFFMAIDGVAPR 82
Query: 114 AKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCILPPE 173
AKMNQ RSRRFRA K+ ++ REK +G LP E
Sbjct: 83 AKMNQ-------------------QRSRRFRAGKDARDQ-------REKAEKNGEKLPDE 116
Query: 174 KEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
K FDSN ITPGTPFMA LS L YY+ R++ D W+ I+VILS +VP
Sbjct: 117 KA----FDSNAITPGTPFMARLSQHLKYYVRKRISEDADWRNIRVILSGHDVP 165
>gi|156839563|ref|XP_001643471.1| hypothetical protein Kpol_1006p9 [Vanderwaltozyma polyspora DSM
70294]
gi|156114083|gb|EDO15613.1| hypothetical protein Kpol_1006p9 [Vanderwaltozyma polyspora DSM
70294]
Length = 1292
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 104/185 (56%), Gaps = 34/185 (18%)
Query: 47 NPNGMEFDNLYLDMNGIIHPCTH-----PEDKPAPKDEDEMMVAIFECIDRLFRIVRPRK 101
N N EFDNLYLDMN I+H C+H E P E+E+ IF ID LF++++P+K
Sbjct: 23 NDNVPEFDNLYLDMNSILHSCSHGDRGDTEGIIKPLTEEEIFTRIFIYIDHLFQLIKPKK 82
Query: 102 LLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIRE 161
+ YMAIDGVAPRAKMNQ RSRRFR + E + +
Sbjct: 83 VFYMAIDGVAPRAKMNQ-------------------QRSRRFRTAMENEKAM-------N 116
Query: 162 KLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILS 221
K++ +G ++ E + FD N ITPGT FM L+ L Y+IHD+++ND W I++ILS
Sbjct: 117 KIIENGGVISEEIKP---FDPNAITPGTTFMEKLTKYLKYFIHDKISNDINWANIEIILS 173
Query: 222 DANVP 226
VP
Sbjct: 174 GHEVP 178
>gi|389635811|ref|XP_003715558.1| 5'-3' exoribonuclease 1 [Magnaporthe oryzae 70-15]
gi|351647891|gb|EHA55751.1| 5'-3' exoribonuclease 1 [Magnaporthe oryzae 70-15]
gi|440470232|gb|ELQ39313.1| 5'-3' exoribonuclease 1 [Magnaporthe oryzae Y34]
gi|440485056|gb|ELQ65052.1| 5'-3' exoribonuclease 1 [Magnaporthe oryzae P131]
Length = 1435
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 81/177 (45%), Positives = 106/177 (59%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPE--DKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFD LYLDMNGIIH CTH + D EDEM + IF I+ LF ++P++L +MAIDG
Sbjct: 28 EFDCLYLDMNGIIHNCTHKDTHDTSFRLSEDEMFIRIFNYIEHLFGKIKPKQLFFMAIDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R+RRFR + + AEVAR +K + +G
Sbjct: 88 VAPRAKMNQ-------------------QRARRFRTALD-----AEVAR--DKAVREGQE 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP E+ FDSNCITPGT FMA LS L Y+++ +++ D W+G +++LS VP
Sbjct: 122 LPKEEP----FDSNCITPGTEFMAKLSEQLKYFVNKKVSEDTEWQGCEIVLSGHEVP 174
>gi|303285348|ref|XP_003061964.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456375|gb|EEH53676.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 252
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/175 (47%), Positives = 100/175 (57%), Gaps = 32/175 (18%)
Query: 53 FDNLYLDMNGIIHPCTHP--EDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGV 110
DNLYLDMNG+IH C+H D EDEMM +F +D +FR+VRPR+LLYMAIDGV
Sbjct: 29 IDNLYLDMNGVIHNCSHGAGTDINTRMTEDEMMAKVFAYLDHIFRMVRPRRLLYMAIDGV 88
Query: 111 APRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCIL 170
APRAKMNQ RSRRFR++ E + +E+ +A G
Sbjct: 89 APRAKMNQ-------------------QRSRRFRSA-------LEAKKAKEEAIAKG--- 119
Query: 171 PPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANV 225
PE G FDSNCITPGTPFMA LS L +Y+ + DP W+ VILS V
Sbjct: 120 EPEP-SGEPFDSNCITPGTPFMARLSEHLRFYVMKKQTEDPQWQKATVILSGHEV 173
>gi|46124843|ref|XP_386975.1| hypothetical protein FG06799.1 [Gibberella zeae PH-1]
Length = 1370
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 80/178 (44%), Positives = 106/178 (59%), Gaps = 33/178 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHP---EDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAID 108
EFD LYLDMNGIIH CTH ED E+EM + IF I+ LF ++P++L +MAID
Sbjct: 28 EFDCLYLDMNGIIHNCTHKDAGEDVSFRLSEEEMFIRIFNYIEHLFGKIKPKQLFFMAID 87
Query: 109 GVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGC 168
GVAPRAKMNQ RSRRFR + + AEK R+K +++G
Sbjct: 88 GVAPRAKMNQ-------------------QRSRRFRTALD-AEKA------RDKAISEGV 121
Query: 169 ILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
+P E+ FDSNCITPGT FMA LS L Y+++ +++ D W+G +++LS VP
Sbjct: 122 EIPKEEP----FDSNCITPGTEFMAKLSQQLRYFVNKKVSEDTDWQGCEIVLSGHEVP 175
>gi|403216681|emb|CCK71177.1| hypothetical protein KNAG_0G01190 [Kazachstania naganishii CBS
8797]
Length = 1493
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/200 (41%), Positives = 106/200 (53%), Gaps = 44/200 (22%)
Query: 30 LPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPK--DEDEMMVAIF 87
+ Q + G +IP EFDNLYLDMN I+H CTH D K E+E+ IF
Sbjct: 17 ISQLIEGSQIP-----------EFDNLYLDMNSILHTCTHGNDDDVTKRMTEEEVFAKIF 65
Query: 88 ECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASK 147
ID LF ++P+K+ YMAIDGVAPRAKMNQ RSRRFR +
Sbjct: 66 SYIDHLFLTIKPQKVFYMAIDGVAPRAKMNQ-------------------QRSRRFRTAM 106
Query: 148 ETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRL 207
+ + +K L G +P G FDSN ITPGT FMA L+ L Y+IHD++
Sbjct: 107 DAENML-------KKALQRGEEIP----SGEPFDSNSITPGTEFMAKLTKNLKYFIHDKI 155
Query: 208 NNDPGWKG-IKVILSDANVP 226
+ND W G +++I S VP
Sbjct: 156 SNDSNWSGDVEIIFSGHEVP 175
>gi|322801303|gb|EFZ21990.1| hypothetical protein SINV_11797 [Solenopsis invicta]
Length = 1572
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 81/177 (45%), Positives = 103/177 (58%), Gaps = 33/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVA-IFECIDRLFRIVRPRKLLYMAIDGV 110
EFD LYLDMNGIIH C+HP D + +EMM IF I+ LF ++RP+KL +MAIDGV
Sbjct: 28 EFDYLYLDMNGIIHTCSHPNDDICFRISEEMMFKNIFHYIEVLFNMIRPQKLFFMAIDGV 87
Query: 111 APRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIRE-KLLADGCI 169
APRAK+NQ R RRFR++K+ A I+E K +A G
Sbjct: 88 APRAKINQ-------------------QRGRRFRSAKD--------AEIQEAKAIAKGVQ 120
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
+P EK FDSNCITPGT FMA L L ++ +++ D GWK K++ S A VP
Sbjct: 121 IPTEKR----FDSNCITPGTLFMAKLGDLLKRFVEYKISVDEGWKKCKILFSGAEVP 173
>gi|408388369|gb|EKJ68055.1| hypothetical protein FPSE_11866 [Fusarium pseudograminearum CS3096]
Length = 1391
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 80/178 (44%), Positives = 106/178 (59%), Gaps = 33/178 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHP---EDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAID 108
EFD LYLDMNGIIH CTH ED E+EM + IF I+ LF ++P++L +MAID
Sbjct: 28 EFDCLYLDMNGIIHNCTHKDAGEDVSFRLSEEEMFIRIFNYIEHLFGKIKPKQLFFMAID 87
Query: 109 GVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGC 168
GVAPRAKMNQ RSRRFR + + AEK R+K +++G
Sbjct: 88 GVAPRAKMNQ-------------------QRSRRFRTALD-AEKA------RDKAISEGV 121
Query: 169 ILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
+P E+ FDSNCITPGT FMA LS L Y+++ +++ D W+G +++LS VP
Sbjct: 122 EIPKEEP----FDSNCITPGTEFMAKLSQQLRYFVNKKVSEDTDWQGCEIVLSGHEVP 175
>gi|299749174|ref|XP_001838563.2| exonuclease II [Coprinopsis cinerea okayama7#130]
gi|298408317|gb|EAU83256.2| exonuclease II [Coprinopsis cinerea okayama7#130]
Length = 1468
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/171 (45%), Positives = 99/171 (57%), Gaps = 32/171 (18%)
Query: 58 LDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAK 115
D NGIIH C+HP D+ A E+++ +IF +D LF ++P+KL +MA+DGVAPRAK
Sbjct: 61 FDFNGIIHNCSHPNDEDAHFRLSEEQIFTSIFAYVDHLFEKIKPKKLFFMAVDGVAPRAK 120
Query: 116 MNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKE 175
MNQ RSRRFR +KE E +REK G LP EK
Sbjct: 121 MNQ-------------------QRSRRFRTAKEAKE-------VREKAERRGEKLPEEKA 154
Query: 176 KGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
FDSNCITPGTPFMA LSA L Y+I+ ++ D W+ ++V+LS VP
Sbjct: 155 ----FDSNCITPGTPFMARLSAQLRYFINKKITEDSNWRSVEVVLSGHEVP 201
>gi|308480687|ref|XP_003102550.1| CRE-XRN-1 protein [Caenorhabditis remanei]
gi|308261282|gb|EFP05235.1| CRE-XRN-1 protein [Caenorhabditis remanei]
Length = 1668
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/177 (44%), Positives = 103/177 (58%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+HP D E+E+ + IF I+ L+ ++RP+K+ +MA+DG
Sbjct: 28 EFDNLYLDMNGIIHNCSHPNDDDVTFRITEEEIFINIFAYIENLYNLIRPQKVFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R+RRF +++ ++ EK +A+G I
Sbjct: 88 VAPRAKMNQ-------------------QRARRFMSARTANSQM-------EKAIANGEI 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP EK FDSNCITPGT FM L L +I + +D W+G K+ILS NVP
Sbjct: 122 LPTEK----RFDSNCITPGTYFMTRLHNKLDEWIKKKSASDSHWQGRKIILSGHNVP 174
>gi|320590324|gb|EFX02767.1| exonuclease [Grosmannia clavigera kw1407]
Length = 1463
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/177 (45%), Positives = 105/177 (59%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPE--DKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFD LYLDMNGIIH CTH + D E+EM + IF I+ LF ++P++L +MAIDG
Sbjct: 28 EFDCLYLDMNGIIHNCTHSDSDDAFTRLGEEEMFIRIFNYIEHLFGKIKPKQLFFMAIDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ RSRRFR + + AEVA R+K +A+G
Sbjct: 88 VAPRAKMNQ-------------------QRSRRFRTALD-----AEVA--RKKAIAEGAQ 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP + FDSNCITPGT FMA LS L Y+++ +++ D W+ V+LS +VP
Sbjct: 122 LPTDDP----FDSNCITPGTEFMAKLSKQLQYFVNKKVSEDKEWQQCTVVLSGHDVP 174
>gi|340057226|emb|CCC51568.1| putative exoribonuclease 2 [Trypanosoma vivax Y486]
Length = 783
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 75/176 (42%), Positives = 103/176 (58%), Gaps = 23/176 (13%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDK-PAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGV 110
+FDNLYLDMNG++HPC H P PK E+EM IF +D +FR+V+PRK L M +DGV
Sbjct: 44 KFDNLYLDMNGLVHPCCHDTAPLPEPKSEEEMFDRIFSQLDLVFRVVQPRKCLVMCVDGV 103
Query: 111 APRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCIL 170
AP++KMNQ RSRRFRA++E AE + ++L+ G
Sbjct: 104 APQSKMNQ-------------------QRSRRFRAAEERAESDQLAMQCADELVEMGLPR 144
Query: 171 PPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
P K S +D N ITP TPFM L + ++I ++N DP W+ + V+ SD++VP
Sbjct: 145 PSPK---SRWDHNVITPSTPFMERLGVAVEWFIGKKVNEDPAWQKVAVVFSDSHVP 197
>gi|345479163|ref|XP_003423891.1| PREDICTED: 5'-3' exoribonuclease 1-like isoform 2 [Nasonia
vitripennis]
Length = 1682
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/177 (46%), Positives = 105/177 (59%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+HP D A E+ + IF I+ LFRI++P+KL +MA+DG
Sbjct: 28 EFDNLYLDMNGIIHNCSHPNDADATFRITEETIFKNIFHYIEILFRIIQPQKLFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAK+NQ R RRFRA+KE AEV + K A G
Sbjct: 88 VAPRAKINQ-------------------QRGRRFRAAKE-----AEV--LEAKARAKGQE 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
+P E + FDSNCITPGT FM+ L+ L Y+I +++ D W+ K+ILS + VP
Sbjct: 122 IPKE----ARFDSNCITPGTVFMSKLNEQLKYFITYKISTDKLWQKCKIILSGSEVP 174
>gi|340508935|gb|EGR34531.1| hypothetical protein IMG5_008400 [Ichthyophthirius multifiliis]
Length = 263
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/182 (44%), Positives = 102/182 (56%), Gaps = 23/182 (12%)
Query: 49 NGMEFDNLYLDMNGIIHPCTHPEDK--PAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMA 106
N E NLYLDMNGIIHPC + P P +M IF ID+L I RP+++LYMA
Sbjct: 33 NNPEIHNLYLDMNGIIHPCCRSDGSAMPIPNTIQDMFNNIFMYIDKLMDICRPQRILYMA 92
Query: 107 IDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLAD 166
IDGVAPRAKMNQ R+RRF+ +KE E + I +
Sbjct: 93 IDGVAPRAKMNQ-------------------QRARRFKGAKEAVELQKKKLEIINEQRQQ 133
Query: 167 GCILPPEKEK--GSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDAN 224
G +P E + S FD+N ITPGT FM LS L +Y+ DR+NN P WK +KV+ SDA+
Sbjct: 134 GEDIPEEVMRFVESKFDTNVITPGTQFMRDLSIALQHYVLDRVNNHPLWKNLKVVFSDAS 193
Query: 225 VP 226
+P
Sbjct: 194 IP 195
>gi|156537119|ref|XP_001603129.1| PREDICTED: 5'-3' exoribonuclease 1-like isoform 1 [Nasonia
vitripennis]
Length = 1739
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/177 (46%), Positives = 105/177 (59%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+HP D A E+ + IF I+ LFRI++P+KL +MA+DG
Sbjct: 28 EFDNLYLDMNGIIHNCSHPNDADATFRITEETIFKNIFHYIEILFRIIQPQKLFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAK+NQ R RRFRA+KE AEV + K A G
Sbjct: 88 VAPRAKINQ-------------------QRGRRFRAAKE-----AEV--LEAKARAKGQE 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
+P E + FDSNCITPGT FM+ L+ L Y+I +++ D W+ K+ILS + VP
Sbjct: 122 IPKE----ARFDSNCITPGTVFMSKLNEQLKYFITYKISTDKLWQKCKIILSGSEVP 174
>gi|310794358|gb|EFQ29819.1| XRN 5'-3' exonuclease [Glomerella graminicola M1.001]
Length = 1407
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 76/178 (42%), Positives = 104/178 (58%), Gaps = 33/178 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHP---EDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAID 108
EFD LYLDMNGIIH CTH ED E+EM + IF I+ LF ++P++L +MAID
Sbjct: 28 EFDCLYLDMNGIIHNCTHKDTGEDTTFRLSEEEMFIRIFNYIEHLFGKIKPKQLFFMAID 87
Query: 109 GVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGC 168
GVAPRAKMNQ R+RRFR + +T + R+K +++G
Sbjct: 88 GVAPRAKMNQ-------------------QRARRFRTALDTE-------KARDKAISEGV 121
Query: 169 ILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
+P E FDSNCITPGT FMA L+ L Y+++ +++ D W+G +++LS VP
Sbjct: 122 EMPKEPP----FDSNCITPGTEFMAKLTQQLKYFVNKKVSEDADWQGCEIVLSGHEVP 175
>gi|71028722|ref|XP_764004.1| exoribonuclease [Theileria parva strain Muguga]
gi|68350958|gb|EAN31721.1| exoribonuclease, putative [Theileria parva]
Length = 958
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 90/201 (44%), Positives = 108/201 (53%), Gaps = 48/201 (23%)
Query: 45 KPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLY 104
K NPNG EFDNLYLDMNGIIHPC HPE+ P+ E+ M I + +DR+F +VRPRKL+Y
Sbjct: 44 KDNPNG-EFDNLYLDMNGIIHPCCHPENMEQPQSEEVMFTCILDYLDRIFFMVRPRKLIY 102
Query: 105 MA-----------IDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKI 153
+A IDGVAPRAK+NQ RSRRF++
Sbjct: 103 LAIGNIKNYIMICIDGVAPRAKINQ-------------------QRSRRFKS-------- 135
Query: 154 AEVARIREKLLADGCILPPEKEKG--------SHFDSNCITPGTPFMACLSACLHYYIHD 205
A +A + ++ D I EK G S +DSN ITPGT FM LS L YI D
Sbjct: 136 AALADLEDETY-DTLIRDYEKRYGKTDLIVRKSKWDSNVITPGTEFMYKLSEKLMEYIED 194
Query: 206 RLNNDPGWKGIKVILSDANVP 226
R WK I VI SD+NVP
Sbjct: 195 RAERYDAWKRIVVIFSDSNVP 215
>gi|345569898|gb|EGX52724.1| hypothetical protein AOL_s00007g507 [Arthrobotrys oligospora ATCC
24927]
Length = 1409
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 78/177 (44%), Positives = 105/177 (59%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPE-DKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFD LYLDMNGIIH CTH + D P + E++M +AIF I+ LF ++P+K +MAIDG
Sbjct: 28 EFDALYLDMNGIIHNCTHKDSDSPTFRMTEEKMFIAIFNYIEHLFGKIKPKKTFFMAIDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R+RRFR + + + +K + DG
Sbjct: 88 VAPRAKMNQ-------------------QRARRFRTALDNE-------KAYQKAVKDGVE 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
+P E FDSNCITPGT FMA LS L Y+I+ ++++D W+G+++ILS VP
Sbjct: 122 MPKEDP----FDSNCITPGTGFMAKLSEQLKYFINKKVSDDAEWQGLEIILSGHEVP 174
>gi|50549393|ref|XP_502167.1| YALI0C23144p [Yarrowia lipolytica]
gi|49648034|emb|CAG82487.1| YALI0C23144p [Yarrowia lipolytica CLIB122]
Length = 1526
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 76/176 (43%), Positives = 100/176 (56%), Gaps = 32/176 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPE-DKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGV 110
E+DNLYLDMN I+H CTH + D E++M AIFE I+ LF +RP+KL +MAIDGV
Sbjct: 28 EYDNLYLDMNSILHVCTHKDADVTFQLTEEQMFRAIFEYIEHLFSKIRPKKLFFMAIDGV 87
Query: 111 APRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCIL 170
APRAKMNQ RSRRFR + + + + K L +G IL
Sbjct: 88 APRAKMNQ-------------------QRSRRFRTA-------LDAEKAKAKALEEGTIL 121
Query: 171 PPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
K FDSN ITPGT FM L+ L+Y++H +++ D W+ I ++LS VP
Sbjct: 122 -----KEDQFDSNAITPGTEFMEKLTTQLNYFVHKKVSEDADWQNIDIVLSGHEVP 172
>gi|324500092|gb|ADY40054.1| 5'-3' exoribonuclease 1 [Ascaris suum]
Length = 1700
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/179 (46%), Positives = 102/179 (56%), Gaps = 36/179 (20%)
Query: 52 EFDNLYLDMNGIIHPCTHP--EDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH CTHP ED E+++ IF ID LF I+ P+++ +MAIDG
Sbjct: 28 EFDNLYLDMNGIIHGCTHPNDEDISFRISEEQIFRDIFNYIDTLFSIIEPKRVFFMAIDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASK--ETAEKIAEVARIREKLLADG 167
VAPRAKMNQ R+RRF ++K E A KIAE + G
Sbjct: 88 VAPRAKMNQ-------------------QRARRFMSAKNAELALKIAE---------SKG 119
Query: 168 CILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
+P EK FD NCITPGT FMA L L Y+I +++ D W+GI+V LS N P
Sbjct: 120 QEIPKEKR----FDPNCITPGTEFMARLHEQLQYFIKMKISTDTAWQGIRVYLSGHNCP 174
>gi|336472444|gb|EGO60604.1| hypothetical protein NEUTE1DRAFT_127448 [Neurospora tetrasperma
FGSC 2508]
gi|350294329|gb|EGZ75414.1| 5'-3' exoribonuclease 1 [Neurospora tetrasperma FGSC 2509]
Length = 1226
Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 79/177 (44%), Positives = 103/177 (58%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPE--DKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFD LYLDMNGIIH CTH + D E+EM +AIF I+ LF ++P+KL +MAIDG
Sbjct: 28 EFDCLYLDMNGIIHNCTHKDTSDVQFRMTEEEMFIAIFNYIEHLFGKIKPKKLFFMAIDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R+RRFR + + + R+K + +G
Sbjct: 88 VAPRAKMNQ-------------------QRARRFRTALDN-------EKARDKAIREGKE 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP E+ FDSNCITPGT FMA LS L Y+IH +++ D W+ +++LS VP
Sbjct: 122 LPKEEP----FDSNCITPGTEFMAKLSQQLRYFIHKKVSEDRDWQQPEIVLSGHEVP 174
>gi|326437826|gb|EGD83396.1| single-stranded RNA 5'-3' exonuclease [Salpingoeca sp. ATCC 50818]
Length = 1780
Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 75/175 (42%), Positives = 97/175 (55%), Gaps = 36/175 (20%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVA 111
EFDNLYLD NGI+H CTH + A + + EMM+AIF I++L ++PRK+L++AIDGVA
Sbjct: 28 EFDNLYLDFNGIVHTCTHGNELAATRSQQEMMMAIFSAIEQLVDAIKPRKVLFIAIDGVA 87
Query: 112 PRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCILP 171
PRAKM Q R RRF+A AR R++ D
Sbjct: 88 PRAKMIQ-------------------QRQRRFKA-----------ARARKQFQQDN---- 113
Query: 172 PEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
E G FDSNCITPGT FMA L L Y+I ++ D W+ ++V+LS VP
Sbjct: 114 --PEHGDAFDSNCITPGTEFMATLEEYLIYFIQRKVEEDAAWRDLEVVLSGHRVP 166
>gi|84996629|ref|XP_953036.1| exoribonuclease (XRN family member) [Theileria annulata strain
Ankara]
gi|65304032|emb|CAI76411.1| exoribonuclease (XRN family member), putative [Theileria annulata]
Length = 937
Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 90/201 (44%), Positives = 109/201 (54%), Gaps = 48/201 (23%)
Query: 45 KPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLY 104
K NPNG EFDNLYLDMNGIIHPC HPE+ P+ E+ M I + +DR+F +VRPRKL+Y
Sbjct: 44 KDNPNG-EFDNLYLDMNGIIHPCCHPENMEQPQTEELMFNCILDYLDRIFFMVRPRKLIY 102
Query: 105 MA-----------IDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKI 153
+A IDGVAPRAK+NQ RSRRF++
Sbjct: 103 LAIGNVNHDIIIFIDGVAPRAKINQ-------------------QRSRRFKS-------- 135
Query: 154 AEVARIREKLLADGCILPPEKEKG--------SHFDSNCITPGTPFMACLSACLHYYIHD 205
A +A + ++ D I EK G S +DSN ITPGT FM LS L YI D
Sbjct: 136 AALADLEDETY-DTLIKDYEKRYGKTNLIVRKSKWDSNVITPGTEFMYKLSEKLIEYIED 194
Query: 206 RLNNDPGWKGIKVILSDANVP 226
R+ WK I VI SD+NVP
Sbjct: 195 RIEKYDAWKIIVVIFSDSNVP 215
>gi|156845531|ref|XP_001645656.1| hypothetical protein Kpol_541p40 [Vanderwaltozyma polyspora DSM
70294]
gi|156116322|gb|EDO17798.1| hypothetical protein Kpol_541p40 [Vanderwaltozyma polyspora DSM
70294]
Length = 1521
Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 76/178 (42%), Positives = 101/178 (56%), Gaps = 33/178 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAPK---DEDEMMVAIFECIDRLFRIVRPRKLLYMAID 108
EFDNLYLDMN I H CTH D + K E+E+ IF ID LF ++P+K YMAID
Sbjct: 28 EFDNLYLDMNSIFHNCTHGNDIDSTKRRLSEEEVFQNIFNYIDHLFNTIKPKKKFYMAID 87
Query: 109 GVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGC 168
GVAPRAKMNQ RSRRFR++ + + +K + +G
Sbjct: 88 GVAPRAKMNQ-------------------QRSRRFRSAMDAENAM-------KKAIENGD 121
Query: 169 ILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP KG FD+N ITPGT FMA L+ + Y+IH+++++D W+ I++I S VP
Sbjct: 122 ELP----KGEPFDTNSITPGTEFMAKLTKNIKYFIHNKISSDSNWRNIEIIFSGHEVP 175
>gi|339896661|ref|XP_001463108.2| putative 5'-3' exonuclease [Leishmania infantum JPCM5]
gi|321398929|emb|CAM65457.2| putative 5'-3' exonuclease [Leishmania infantum JPCM5]
Length = 1499
Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 83/190 (43%), Positives = 106/190 (55%), Gaps = 37/190 (19%)
Query: 40 PFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPK---DEDEMMVAIFECIDRLFRI 96
PF S P DNLYLD+NGIIH CTHP D A + E EM+ A+F +++LF
Sbjct: 20 PFKDSPP-----PVDNLYLDINGIIHNCTHPNDVDATRRSPTEKEMIQAMFVYLEKLFNA 74
Query: 97 VRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEV 156
++PRK +A+DGVAPRAKMNQ R RR+RA E IA
Sbjct: 75 IQPRKYFLLAVDGVAPRAKMNQ-------------------QRQRRYRAGYEMM--IA-- 111
Query: 157 ARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGI 216
RE+ LA G +P EK+ FDSNCITPGTPFM +S Y+I +L+ DP W+G
Sbjct: 112 ---REEALAMGEEVPEEKDV---FDSNCITPGTPFMVRVSKEFQYFITMKLSTDPAWQGC 165
Query: 217 KVILSDANVP 226
++I S + P
Sbjct: 166 QIIFSGHDCP 175
>gi|398010273|ref|XP_003858334.1| 5'-3' exonuclease, putative [Leishmania donovani]
gi|322496541|emb|CBZ31610.1| 5'-3' exonuclease, putative [Leishmania donovani]
Length = 1499
Score = 139 bits (351), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 83/190 (43%), Positives = 106/190 (55%), Gaps = 37/190 (19%)
Query: 40 PFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPK---DEDEMMVAIFECIDRLFRI 96
PF S P DNLYLD+NGIIH CTHP D A + E EM+ A+F +++LF
Sbjct: 20 PFKDSPP-----PVDNLYLDINGIIHNCTHPNDVDATRRSPTEKEMIQAMFVYLEKLFNA 74
Query: 97 VRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEV 156
++PRK +A+DGVAPRAKMNQ R RR+RA E IA
Sbjct: 75 IQPRKYFLLAVDGVAPRAKMNQ-------------------QRQRRYRAGYEMM--IA-- 111
Query: 157 ARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGI 216
RE+ LA G +P EK+ FDSNCITPGTPFM +S Y+I +L+ DP W+G
Sbjct: 112 ---REEALAMGEEVPEEKDV---FDSNCITPGTPFMVRVSKEFQYFITMKLSTDPAWQGC 165
Query: 217 KVILSDANVP 226
++I S + P
Sbjct: 166 QIIFSGHDCP 175
>gi|253743695|gb|EET00027.1| 5'-3' exoribonuclease 2 [Giardia intestinalis ATCC 50581]
Length = 900
Score = 139 bits (351), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 80/192 (41%), Positives = 108/192 (56%), Gaps = 36/192 (18%)
Query: 48 PNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAI 107
P G DNLY D NG+IHPC HPE + P+ E E+ IF+ +DR+ I RPR+LLY+A+
Sbjct: 39 PLGFAIDNLYFDTNGLIHPCFHPEGRAQPQTEAEVFEEIFQVLDRVVSICRPRRLLYLAV 98
Query: 108 DGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIRE-KLLAD 166
DG APRAK+NQ RSRRF A+ E +I E R++E +L++
Sbjct: 99 DGPAPRAKLNQ-------------------QRSRRFMAAYE--RQIKE--RVQERRLMSF 135
Query: 167 GCILPPEKEKGS------------HFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWK 214
G + P K+ GS + DSN ITPGTPFM+ LS L YY+ +R N W+
Sbjct: 136 GDVEPSLKKLGSEMNDATESTAQTNLDSNAITPGTPFMSRLSVALKYYVANRQANSKLWR 195
Query: 215 GIKVILSDANVP 226
+ V+ +DA P
Sbjct: 196 HLTVLYADAWSP 207
>gi|157864164|ref|XP_001680795.1| putative 5'-3' exonuclease [Leishmania major strain Friedlin]
gi|68124087|emb|CAJ02069.1| putative 5'-3' exonuclease [Leishmania major strain Friedlin]
Length = 1490
Score = 139 bits (351), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 83/190 (43%), Positives = 106/190 (55%), Gaps = 37/190 (19%)
Query: 40 PFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPK---DEDEMMVAIFECIDRLFRI 96
PF S P DNLYLD+NGIIH CTHP D A + E EM+ A+F +++LF
Sbjct: 20 PFKDSPP-----PVDNLYLDINGIIHNCTHPNDVDATRRSPTEKEMIQAMFVYLEKLFNA 74
Query: 97 VRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEV 156
++PRK +A+DGVAPRAKMNQ R RR+RA E IA
Sbjct: 75 IQPRKYFLLAVDGVAPRAKMNQ-------------------QRQRRYRAGYEMM--IA-- 111
Query: 157 ARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGI 216
RE+ LA G +P EK+ FDSNCITPGTPFM +S Y+I +L+ DP W+G
Sbjct: 112 ---REEALAMGEEVPEEKDV---FDSNCITPGTPFMVRVSKEFQYFITMKLSTDPAWQGC 165
Query: 217 KVILSDANVP 226
++I S + P
Sbjct: 166 QIIFSGHDCP 175
>gi|212645611|ref|NP_496945.3| Protein XRN-1 [Caenorhabditis elegans]
gi|194680614|emb|CAC35856.3| Protein XRN-1 [Caenorhabditis elegans]
Length = 1591
Score = 139 bits (350), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 78/177 (44%), Positives = 101/177 (57%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+HP D EDE+ V IF I+ L+ ++RP+K+ +MA+DG
Sbjct: 28 EFDNLYLDMNGIIHNCSHPNDDDVTFRITEDEIFVNIFAYIENLYNLIRPQKVFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R+RRF +++ ++A K L +G I
Sbjct: 88 VAPRAKMNQ-------------------QRARRFMSARTAHTQLA-------KALENGEI 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
+P E + FDSNCITPGT FM L L +I + D W+G K+ILS NVP
Sbjct: 122 MPSE----ARFDSNCITPGTYFMTRLHQKLDDWIKTKSATDSRWQGRKIILSGHNVP 174
>gi|402082044|gb|EJT77189.1| 5'-3' exoribonuclease 1 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 1452
Score = 139 bits (350), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 104/177 (58%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPE--DKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFD LYLDMNGIIH CTH + D E+EM + IF I+ LF ++P++L +MAIDG
Sbjct: 28 EFDCLYLDMNGIIHNCTHKDTHDTSFRLSEEEMFIRIFNYIEHLFGKIKPKQLFFMAIDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R+RRFR + + + R+K +++G
Sbjct: 88 VAPRAKMNQ-------------------QRARRFRTA-------LDAEQARDKAISEGKE 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP E+ FDSNCITPGT FMA LS L Y+++ +++ D W+G +++LS VP
Sbjct: 122 LPKEEP----FDSNCITPGTAFMAKLSEQLKYFVNKKVSEDKEWQGCEIVLSGHEVP 174
>gi|402582600|gb|EJW76545.1| hypothetical protein WUBG_12547, partial [Wuchereria bancrofti]
Length = 123
Score = 139 bits (350), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 63/86 (73%), Positives = 74/86 (86%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
P+++NG ++P ++ PNPN EFDNLYLDMNGIIHPCTHPED+P PK E+EM + IFE I
Sbjct: 32 PRDLNGIRVPVNTVDPNPNFQEFDNLYLDMNGIIHPCTHPEDRPCPKTEEEMFMLIFEYI 91
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKM 116
DRLF IVRPRKLLYMAIDGVAPRAK+
Sbjct: 92 DRLFAIVRPRKLLYMAIDGVAPRAKV 117
>gi|429857774|gb|ELA32622.1| exonuclease kem1 [Colletotrichum gloeosporioides Nara gc5]
Length = 1398
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/178 (43%), Positives = 105/178 (58%), Gaps = 33/178 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHP---EDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAID 108
EFD LYLDMNGIIH CTH ED E+EM + IF I+ LF ++P++L +MAID
Sbjct: 28 EFDCLYLDMNGIIHNCTHKDTGEDTTFRLSEEEMFIRIFNYIEHLFGKIKPKQLFFMAID 87
Query: 109 GVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGC 168
GVAPRAKMNQ R+RRFR + + AEK R+K +++G
Sbjct: 88 GVAPRAKMNQ-------------------QRARRFRTALD-AEKA------RDKAISEGV 121
Query: 169 ILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
+P E FDSNCITPGT FMA L+ L Y+++ +++ D W+G +++LS VP
Sbjct: 122 EMPKEPP----FDSNCITPGTEFMAKLTQQLKYFVNKKVSEDADWQGCEIVLSGHEVP 175
>gi|380483599|emb|CCF40522.1| 5'-3' exoribonuclease, partial [Colletotrichum higginsianum]
Length = 553
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/178 (42%), Positives = 104/178 (58%), Gaps = 33/178 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHP---EDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAID 108
EFD LYLDMNGIIH CTH ED E+EM + IF I+ LF ++P++L +MAID
Sbjct: 28 EFDCLYLDMNGIIHNCTHKDTGEDTTFRLSEEEMFIRIFNYIEHLFGKIKPKQLFFMAID 87
Query: 109 GVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGC 168
GVAPRAKMNQ R+RRFR + +T + R+K +++G
Sbjct: 88 GVAPRAKMNQ-------------------QRARRFRTALDTE-------KARDKAISEGV 121
Query: 169 ILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
+P E FDSNCITPGT FMA L+ L Y+++ +++ D W+G +++LS VP
Sbjct: 122 EMPKEPP----FDSNCITPGTEFMAKLTQQLKYFVNKKVSEDADWQGCEIVLSGHEVP 175
>gi|326429495|gb|EGD75065.1| hypothetical protein PTSG_06722 [Salpingoeca sp. ATCC 50818]
Length = 1402
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/176 (43%), Positives = 102/176 (57%), Gaps = 28/176 (15%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGV 110
+FDNLYLDMNGIIH C+HP D + E++M I I+ LFRI+RP+++ YMAIDG
Sbjct: 28 DFDNLYLDMNGIIHTCSHPSDDVNFRLTEEKMFEDICAYIETLFRIIRPQRVFYMAIDGC 87
Query: 111 APRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCIL 170
APRAKMNQ R+RRFR++KE E R+K +G +L
Sbjct: 88 APRAKMNQ-------------------QRARRFRSAKEAEEA-------RQKAEREGKLL 121
Query: 171 PPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
DSNCITPGTPFM L L Y++ ++ +DP W+G++V+LS VP
Sbjct: 122 DDPDAPPPF-DSNCITPGTPFMHRLHQHLEYFVQAKITSDPAWQGLRVVLSGHQVP 176
>gi|312075567|ref|XP_003140474.1| single-stranded RNA 5'-3' exonuclease [Loa loa]
gi|307764361|gb|EFO23595.1| single-stranded RNA 5'-3' exonuclease [Loa loa]
Length = 258
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 101/177 (57%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+HP+D+ E+E+ IF I+ LF I++PRK+ +MA+DG
Sbjct: 28 EFDNLYLDMNGIIHSCSHPDDEDVSFRISEEEIFRDIFNYINFLFGIIKPRKVFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R+RRF ++K E + K +G
Sbjct: 88 VAPRAKMNQ-------------------QRARRFMSAKNAQEAM-------NKARKNGVK 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
+P EK FDSNCITPGT FMA L L Y++ ++ D W+G+++ LS N P
Sbjct: 122 IPDEKP----FDSNCITPGTHFMARLHEQLQYFVQMKITTDSCWQGLRIYLSGHNCP 174
>gi|402585499|gb|EJW79439.1| single-stranded RNA 5'-3' exonuclease [Wuchereria bancrofti]
Length = 446
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/177 (43%), Positives = 104/177 (58%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+HP+D+ E+++ IF ID LF I++P+K+ +MAIDG
Sbjct: 28 EFDNLYLDMNGIIHGCSHPDDEDISFRISEEQIFRDIFNYIDFLFGIIKPKKVFFMAIDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R+RRF ++K E ++ + R+K G
Sbjct: 88 VAPRAKMNQ-------------------QRARRFMSAKNAREALS---KARKK----GIK 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
+P EK FDSNCITPGT FMA L L Y++ ++ D W+G+++ LS N P
Sbjct: 122 IPDEKP----FDSNCITPGTEFMARLHEQLQYFVQMKITTDSCWQGLRIYLSGHNCP 174
>gi|170043138|ref|XP_001849256.1| 5'-3' exoribonuclease 1 [Culex quinquefasciatus]
gi|167866570|gb|EDS29953.1| 5'-3' exoribonuclease 1 [Culex quinquefasciatus]
Length = 1609
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/177 (41%), Positives = 102/177 (57%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPA--PKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
+FDNLYLDMNGIIH C+HP D E+++ IF ++ LFR++RP+KL ++A+DG
Sbjct: 28 DFDNLYLDMNGIIHNCSHPNDSDVFFRITEEQIFSDIFHYLEFLFRMIRPQKLFFIAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R RRFR+++E E++ + + G +
Sbjct: 88 VAPRAKMNQ-------------------QRGRRFRSAREAQEQVEQAEK-------KGDV 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP E + FDSNCITPGT FM L L ++I +++ +P WK KV+LS P
Sbjct: 122 LPLE----ARFDSNCITPGTSFMVRLQRALEHFIKVKVSTNPLWKHCKVVLSGHETP 174
>gi|116199173|ref|XP_001225398.1| hypothetical protein CHGG_07742 [Chaetomium globosum CBS 148.51]
gi|88179021|gb|EAQ86489.1| hypothetical protein CHGG_07742 [Chaetomium globosum CBS 148.51]
Length = 1420
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/177 (45%), Positives = 105/177 (59%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTH--PEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFD LYLDMNGIIH CTH +D E+EM +AIF I+ LF ++P+KL +MAIDG
Sbjct: 28 EFDCLYLDMNGIIHNCTHKDSDDVQFRLSEEEMFIAIFNYIEHLFGKIKPKKLFFMAIDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R+RRFR + E AEK R+K + +G
Sbjct: 88 VAPRAKMNQ-------------------QRARRFRTALE-AEK------ARDKAIKEGKE 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP E+ FDSNCITPGT FMA L+ L Y+I+ +++ D W+ +++LS VP
Sbjct: 122 LPKEEP----FDSNCITPGTEFMAKLTQQLKYFINKKVSEDRDWQQPEIVLSGHEVP 174
>gi|332029616|gb|EGI69505.1| 5'-3' exoribonuclease 1 [Acromyrmex echinatior]
Length = 1679
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/176 (44%), Positives = 101/176 (57%), Gaps = 31/176 (17%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVA-IFECIDRLFRIVRPRKLLYMAIDGV 110
EFD LYLDMNGIIH C+HP D + +EM+ IF I+ LF ++RP+KL +MAIDGV
Sbjct: 28 EFDYLYLDMNGIIHTCSHPNDDVCFRISEEMIFKNIFHYIEVLFNMIRPQKLFFMAIDGV 87
Query: 111 APRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCIL 170
APRAK+NQ R RRFRA+K+ AEV K +A G +
Sbjct: 88 APRAKINQ-------------------QRGRRFRAAKD-----AEVQEA--KAIAKGIPI 121
Query: 171 PPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
P EK FDSNCITPGT FMA L L ++ +++ D WK K++ S + VP
Sbjct: 122 PKEK----RFDSNCITPGTLFMAKLGEQLKCFVEHKVSTDDAWKKCKILFSGSEVP 173
>gi|401415084|ref|XP_003872038.1| putative 5'-3' exonuclease [Leishmania mexicana MHOM/GT/2001/U1103]
gi|322488260|emb|CBZ23505.1| putative 5'-3' exonuclease [Leishmania mexicana MHOM/GT/2001/U1103]
Length = 1527
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/190 (43%), Positives = 106/190 (55%), Gaps = 37/190 (19%)
Query: 40 PFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPK---DEDEMMVAIFECIDRLFRI 96
PF S P DNLYLD+NGIIH CTHP D A + E EM+ A+F +++LF
Sbjct: 20 PFKDSPP-----PVDNLYLDINGIIHNCTHPNDVDATRRSPTEKEMIQAMFIYLEKLFNA 74
Query: 97 VRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEV 156
++PRK +A+DGVAPRAKMNQ R RR+RA E IA
Sbjct: 75 IQPRKYFLLAVDGVAPRAKMNQ-------------------QRQRRYRAGYEMM--IA-- 111
Query: 157 ARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGI 216
R++ LA G +P EK+ FDSNCITPGTPFM +S Y+I +L+ DP W+G
Sbjct: 112 ---RQEALAMGEEVPEEKDV---FDSNCITPGTPFMVRVSKEFQYFITMKLSTDPAWQGC 165
Query: 217 KVILSDANVP 226
++I S + P
Sbjct: 166 QIIFSGHDCP 175
>gi|397628044|gb|EJK68715.1| hypothetical protein THAOC_10078 [Thalassiosira oceanica]
Length = 1579
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/178 (43%), Positives = 104/178 (58%), Gaps = 28/178 (15%)
Query: 52 EFDNLYLDMNGIIHPCTHPE--DKPAPKDEDEMMVAIFECIDRLF-RIVRPRKLLYMAID 108
EFD+LYLDMNGIIH CTHP D E +M++ I +DR+ +IV+P+ ++MAID
Sbjct: 86 EFDHLYLDMNGIIHGCTHPNHLDVSDVLTERDMVLGIMHYLDRIITQIVKPKVSVFMAID 145
Query: 109 GVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGC 168
GVAPRAK+NQ RSRRFR++K+ AE E R+R AD
Sbjct: 146 GVAPRAKLNQ-------------------QRSRRFRSAKDLAEATKEAQRLRPIDGAD-- 184
Query: 169 ILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
P+ G+ FDSNCITPGT F+ +S C+ Y+I ++ DP W+ + VI S VP
Sbjct: 185 ---PDPYAGA-FDSNCITPGTEFLLRISNCIRYFIRKKIKEDPLWRNLSVIFSGPEVP 238
>gi|195133694|ref|XP_002011274.1| GI16439 [Drosophila mojavensis]
gi|193907249|gb|EDW06116.1| GI16439 [Drosophila mojavensis]
Length = 1816
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/177 (42%), Positives = 103/177 (58%), Gaps = 33/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGI+H C+HP+D +E ++ I+ ID+LF +++P+KL ++A+DG
Sbjct: 28 EFDNLYLDMNGIVHNCSHPDDSNIHFHLEETQIFQDIYNYIDKLFYLIKPQKLFFLAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ RSRRFR+++E AE++ AR R
Sbjct: 88 VAPRAKMNQ-------------------QRSRRFRSARE-AEQLEAKARQRG-------- 119
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
EK + FDSNCITPGT FM L A L ++ +++ DP W+ +VILS P
Sbjct: 120 ---EKREHERFDSNCITPGTEFMVRLQAGLRCFLRTKISQDPLWQKCRVILSGQETP 173
>gi|62701868|gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group]
gi|77548751|gb|ABA91548.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 2340
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/173 (45%), Positives = 100/173 (57%), Gaps = 26/173 (15%)
Query: 53 FDNLYLDMNGIIHPCTHPEDK-----PAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAI 107
+ NLYLDMNGIIHPC HP+D+ P P +E+ ++F+ +DRL RIVRP LLY+A+
Sbjct: 41 YHNLYLDMNGIIHPCFHPQDQVCPPSPVPTTLEEVFHSMFDYMDRLIRIVRPTSLLYLAV 100
Query: 108 DGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADG 167
DGVAPRAKMNQ R+RRF+++ + E +R++ A+G
Sbjct: 101 DGVAPRAKMNQ-------------------QRARRFKSAMAAKQAEVEENILRDRFRAEG 141
Query: 168 -CILPPEKEKGSHF-DSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKV 218
+LP E S D N IT GT FM LS L YYI RLN+DP WK I V
Sbjct: 142 KKVLPRETSSSSEVSDPNVITLGTEFMDKLSDALKYYIRARLNSDPLWKDINV 194
>gi|336262386|ref|XP_003345977.1| hypothetical protein SMAC_06532 [Sordaria macrospora k-hell]
gi|380089569|emb|CCC12451.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 1428
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/177 (44%), Positives = 103/177 (58%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPE--DKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFD LYLDMNGIIH CTH + D E+EM +AIF I+ LF ++P+KL +MAIDG
Sbjct: 28 EFDCLYLDMNGIIHNCTHKDTSDVQFRMTEEEMFIAIFNYIEHLFGKIKPKKLFFMAIDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R+RRFR + + + R+K + +G
Sbjct: 88 VAPRAKMNQ-------------------QRARRFRTALDN-------EKARDKAIREGKE 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP E+ FDSNCITPGT FMA LS L Y+I+ +++ D W+ +++LS VP
Sbjct: 122 LPKEEP----FDSNCITPGTEFMAKLSQQLRYFINKKVSEDKDWQQPEIVLSGHEVP 174
>gi|350402247|ref|XP_003486419.1| PREDICTED: 5'-3' exoribonuclease 1-like [Bombus impatiens]
Length = 1628
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 78/178 (43%), Positives = 104/178 (58%), Gaps = 34/178 (19%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLD+NGIIH C+HP+D E+ + IF I+ LFR+++P+KL ++A+DG
Sbjct: 28 EFDNLYLDVNGIIHDCSHPDDTDITFRISEETIFKNIFRYIEVLFRMIQPQKLFFIAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIRE-KLLADGC 168
VAPRAK+NQ RSRRF+ +K+ A+I+E K G
Sbjct: 88 VAPRAKINQ-------------------QRSRRFKTAKD--------AKIQEDKAKVKGT 120
Query: 169 ILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
ILP EK FDSNCITPGT FM+ L L Y+I +++ D W+ KVI S + VP
Sbjct: 121 ILPKEKR----FDSNCITPGTVFMSKLDEQLKYFITYKISTDKLWQKCKVIFSGSQVP 174
>gi|307194446|gb|EFN76744.1| 5'-3' exoribonuclease 1 [Harpegnathos saltator]
Length = 1642
Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 79/177 (44%), Positives = 102/177 (57%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFD LYLDMNGI+H C+HP D ED + IF I+ LF ++RP+KL +MAIDG
Sbjct: 28 EFDYLYLDMNGIVHACSHPNDSDVHFRISEDTIFNNIFHYIEVLFNMIRPQKLFFMAIDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAK+NQ RSRRFR +K+ AEV K+ G +
Sbjct: 88 VAPRAKINQ-------------------QRSRRFRTAKD-----AEVQEANAKI--HGLV 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
+P EK+ FDSNCITPGT FMA L+ L+ +I +++ D WK KV+ S + VP
Sbjct: 122 IPTEKK----FDSNCITPGTFFMAELTRRLNRFIVHKISIDDTWKKCKVLFSGSEVP 174
>gi|341892378|gb|EGT48313.1| CBN-XRN-1 protein [Caenorhabditis brenneri]
Length = 1684
Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 75/177 (42%), Positives = 101/177 (57%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+HP D E+E+ V IF I+ L+ ++RP+K+ +MA+DG
Sbjct: 28 EFDNLYLDMNGIIHNCSHPNDDDVTFRITEEEIFVNIFAYIENLYNLIRPQKVFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R+RRF +++ ++ +K + G +
Sbjct: 88 VAPRAKMNQ-------------------QRARRFMSARTAQTQL-------DKAIEKGEV 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
+P EK FDSNCITPGT FM L L +I + +D W+G K+ILS NVP
Sbjct: 122 IPTEK----RFDSNCITPGTYFMTRLHDQLDEWIKKKSESDSHWQGRKIILSGHNVP 174
>gi|154331043|ref|XP_001561961.1| putative 5'-3' exonuclease [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134059283|emb|CAM36982.1| putative 5'-3' exonuclease [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|449310628|gb|AGE92541.1| 5'-3' exonuclease [Leishmania braziliensis]
gi|449310652|gb|AGE92553.1| 5'-3' exonuclease [Leishmania braziliensis]
Length = 1513
Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 80/190 (42%), Positives = 104/190 (54%), Gaps = 37/190 (19%)
Query: 40 PFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPK---DEDEMMVAIFECIDRLFRI 96
PF S P DNLYLD+NGIIH CTHP D A + E EM+ A+F +++LF
Sbjct: 20 PFKDSPP-----PVDNLYLDINGIIHNCTHPNDVDATRRSPTEKEMIQAMFIYLEKLFNA 74
Query: 97 VRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEV 156
++PRK +A+DGVAPRAKMNQ R RR+RA E +
Sbjct: 75 IQPRKYFLLAVDGVAPRAKMNQ-------------------QRQRRYRAGYE-------M 108
Query: 157 ARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGI 216
RE+ LA G +P EK+ FDSNCITPGTPFM +S Y+I +L+ DP W+
Sbjct: 109 MVAREEALAMGEEVPEEKDM---FDSNCITPGTPFMVRVSTEFQYFITMKLSTDPAWQRC 165
Query: 217 KVILSDANVP 226
++I S + P
Sbjct: 166 EIIFSGHDCP 175
>gi|452822189|gb|EME29211.1| 5'-3' exoribonuclease [Galdieria sulphuraria]
Length = 571
Score = 136 bits (342), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 79/178 (44%), Positives = 100/178 (56%), Gaps = 33/178 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPED--KPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDN YLDMNGIIH CTH + + + +EM +IFE DRL+RIV+P+KLL++A+DG
Sbjct: 26 EFDNFYLDMNGIIHLCTHNNNSLQLVWNNVEEMFDSIFEYTDRLYRIVKPKKLLFLAVDG 85
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ RSRRFR++K+ EK LA+
Sbjct: 86 VAPRAKMNQ-------------------QRSRRFRSAKDA-----------EKALAEAIE 115
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGW-KGIKVILSDANVP 226
E + S FDSNCITPGT FM LS +I +DP W +G +I S +VP
Sbjct: 116 RGEEIKSSSRFDSNCITPGTEFMHVLSQRFKDWISFMTTHDPAWQQGCDIIFSGPDVP 173
>gi|268533038|ref|XP_002631647.1| C. briggsae CBR-XRN-1 protein [Caenorhabditis briggsae]
Length = 1183
Score = 136 bits (342), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 78/199 (39%), Positives = 110/199 (55%), Gaps = 43/199 (21%)
Query: 30 LPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIF 87
L + +N +IP EFDNLYLDMNGIIH C+HP D E+E+ V IF
Sbjct: 17 LSEVINESQIP-----------EFDNLYLDMNGIIHNCSHPNDDDVTFRITEEEIFVNIF 65
Query: 88 ECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASK 147
I+ L+ +++P+K+ +MA+DGVAPRAKMNQ R+RRF +++
Sbjct: 66 AYIENLYNLIKPQKVFFMAVDGVAPRAKMNQ-------------------QRARRFMSAR 106
Query: 148 ETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRL 207
++ ++ +A G +LP EK FDSNCITPGT FM L L ++ ++
Sbjct: 107 TAQTQM-------DQAIAKGEVLPSEK----RFDSNCITPGTYFMTRLHEKLDAWVREKS 155
Query: 208 NNDPGWKGIKVILSDANVP 226
+D W+G K+ILS NVP
Sbjct: 156 VSDTRWQGRKIILSGHNVP 174
>gi|341882472|gb|EGT38407.1| hypothetical protein CAEBREN_28761, partial [Caenorhabditis
brenneri]
Length = 274
Score = 136 bits (342), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 79/199 (39%), Positives = 108/199 (54%), Gaps = 43/199 (21%)
Query: 30 LPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIF 87
L + +N +IP EFDNLYLDMNGIIH C+HP D E+E+ V IF
Sbjct: 17 LSEVINESQIP-----------EFDNLYLDMNGIIHNCSHPNDDDVTFRITEEEIFVNIF 65
Query: 88 ECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASK 147
I+ L+ ++RP+K+ +MA+DGVAPRAKMNQ R+RRF +++
Sbjct: 66 AYIENLYNLIRPQKVFFMAVDGVAPRAKMNQ-------------------QRARRFMSAR 106
Query: 148 ETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRL 207
++ +K + G ++P EK FDSNCITPGT FM L L +I +
Sbjct: 107 TAQTQL-------DKAIEKGEVIPTEKR----FDSNCITPGTYFMTRLHDQLDEWIKKKS 155
Query: 208 NNDPGWKGIKVILSDANVP 226
+D W+G K+ILS NVP
Sbjct: 156 ESDSHWQGRKIILSGHNVP 174
>gi|342184282|emb|CCC93763.1| putative 5'-3' exoribonuclease 2 [Trypanosoma congolense IL3000]
Length = 785
Score = 136 bits (342), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 104/193 (53%), Gaps = 27/193 (13%)
Query: 34 VNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDK-PAPKDEDEMMVAIFECIDR 92
+ G P D +K G FDNLYLDMNG++HPC H P P E+EM IF +D
Sbjct: 30 MRGIGHPEDGAK----GPGFDNLYLDMNGLVHPCCHDTAPLPEPASEEEMFERIFAQVDL 85
Query: 93 LFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEK 152
+F+IVRPRK L M +DGVAP++KMNQ RSRRFRA++E+ E
Sbjct: 86 VFKIVRPRKCLVMCVDGVAPQSKMNQ-------------------QRSRRFRAAEESVES 126
Query: 153 IAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPG 212
A +L G PE + +D N ITP TPFM L + ++I +LN DP
Sbjct: 127 GRLSAECLAELRKKGL---PEPDIRPRWDHNVITPATPFMERLGLAVEWFILKKLNEDPA 183
Query: 213 WKGIKVILSDANV 225
W I V+ SDA+V
Sbjct: 184 WGKIVVVFSDAHV 196
>gi|406861681|gb|EKD14734.1| exonuclease II Exo2 [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 1395
Score = 136 bits (342), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 77/177 (43%), Positives = 105/177 (59%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTH--PEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFD LYLDMNGIIH CTH +D E++M +AIF I+ LF ++P++L +MAIDG
Sbjct: 28 EFDCLYLDMNGIIHNCTHKDTDDAMFRMTEEQMFIAIFNYIEHLFGKIKPKQLFFMAIDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R+RRFR + + AE A R+K + +G
Sbjct: 88 VAPRAKMNQ-------------------QRARRFRTALD-----AENA--RDKAIKEGKE 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
+P E+ FDSN ITPGT FM L+ L Y+I+ +++ D W+G++V+LS VP
Sbjct: 122 MPKEEA----FDSNAITPGTAFMHKLTQQLKYFINKKVSEDTDWQGVEVVLSGHEVP 174
>gi|399949668|gb|AFP65326.1| dhm exonuclease [Chroomonas mesostigmatica CCMP1168]
Length = 549
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/176 (43%), Positives = 98/176 (55%), Gaps = 30/176 (17%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVA 111
+FD YLDMNGIIH C+ ++ + E+E+ IF D LFRIVRPRKL+Y+AIDGVA
Sbjct: 26 QFDCFYLDMNGIIHNCSQKNNEIGTQYEEELFRKIFSYTDHLFRIVRPRKLIYLAIDGVA 85
Query: 112 PRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCILP 171
PRAKMNQ RSRRFR+ KE + KL + + P
Sbjct: 86 PRAKMNQ-------------------QRSRRFRSVKELE---------KTKLTQEKNV-P 116
Query: 172 PEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGW-KGIKVILSDANVP 226
E + +FDSNCITPGT FM LS ++ ++ NDP W +G +I S + VP
Sbjct: 117 LENFEKKYFDSNCITPGTTFMKRLSQSFKKWLAKKIRNDPEWQQGCDIIFSGSEVP 172
>gi|307180136|gb|EFN68180.1| 5'-3' exoribonuclease 1 [Camponotus floridanus]
Length = 1644
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/176 (44%), Positives = 101/176 (57%), Gaps = 31/176 (17%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGV 110
EFD LYLDMNGIIH C+HP D + E+++ IF I+ LF ++RP+KL +MAIDGV
Sbjct: 28 EFDYLYLDMNGIIHTCSHPNDDVCFRISEEDIFKNIFHYIEVLFNMIRPQKLFFMAIDGV 87
Query: 111 APRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCIL 170
APRAK+NQ R RRFRA+K+ AEV + K A G +
Sbjct: 88 APRAKINQ-------------------QRGRRFRAAKD-----AEVQEAKAK--AKGLEI 121
Query: 171 PPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
P EK FDSNCITPGT FMA L L ++ +++ D WK K++ S + VP
Sbjct: 122 PKEKR----FDSNCITPGTLFMAKLGEQLKLFVEYKVSMDDTWKKCKILFSGSEVP 173
>gi|189237444|ref|XP_974750.2| PREDICTED: similar to 5-3 exoribonuclease 1 [Tribolium castaneum]
Length = 1485
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/176 (43%), Positives = 103/176 (58%), Gaps = 32/176 (18%)
Query: 53 FDNLYLDMNGIIHPCTHPEDK-PAPKDEDEMMVA-IFECIDRLFRIVRPRKLLYMAIDGV 110
FDNLYLDMNGIIH C+HP+D P + +E + A IF I+ LFR+++P+K+ +MA+DGV
Sbjct: 29 FDNLYLDMNGIIHMCSHPDDNNPHFRITEEKIFADIFHYIEFLFRMIKPQKVFFMAVDGV 88
Query: 111 APRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCIL 170
APRAKMNQ R RRFR++K+ + E + EKL
Sbjct: 89 APRAKMNQ-------------------QRGRRFRSAKDAEKMELEAKKKGEKL------- 122
Query: 171 PPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
P+ E+ FDSNCITPGT FMA L L Y++ +++ D WK K+ILS P
Sbjct: 123 -PDVER---FDSNCITPGTEFMARLHEQLKYFVVSKVSTDNMWKKCKIILSGHETP 174
>gi|403171712|ref|XP_003330904.2| hypothetical protein PGTG_12441 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375169305|gb|EFP86485.2| hypothetical protein PGTG_12441 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 751
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/201 (38%), Positives = 105/201 (52%), Gaps = 44/201 (21%)
Query: 28 VSLPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKD--EDEMMVA 85
V L Q + G IP E DNLYLDMNGIIH C+HP A E E+
Sbjct: 16 VVLHQVIQGDCIP-----------EIDNLYLDMNGIIHNCSHPSTPTADFQITEPEIFSG 64
Query: 86 IFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRA 145
IF ++ LF + +P+KL +MA+DGVAPRAKMN+ RSRRF+A
Sbjct: 65 IFAALEHLFTLAKPKKLFFMAVDGVAPRAKMNE-------------------QRSRRFKA 105
Query: 146 SKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHD 205
++ + A R + +++ FDSNCITPGTPFMA L L Y+I+
Sbjct: 106 AQANQTMLQRNAFRRFQTVSNS------------FDSNCITPGTPFMARLHEQLKYFINK 153
Query: 206 RLNNDPGWKGIKVILSDANVP 226
++ DP W+ ++VI S +VP
Sbjct: 154 KVTEDPAWQAVQVIFSGHDVP 174
>gi|270007014|gb|EFA03462.1| hypothetical protein TcasGA2_TC013457 [Tribolium castaneum]
Length = 1531
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/176 (43%), Positives = 103/176 (58%), Gaps = 32/176 (18%)
Query: 53 FDNLYLDMNGIIHPCTHPEDK-PAPKDEDEMMVA-IFECIDRLFRIVRPRKLLYMAIDGV 110
FDNLYLDMNGIIH C+HP+D P + +E + A IF I+ LFR+++P+K+ +MA+DGV
Sbjct: 29 FDNLYLDMNGIIHMCSHPDDNNPHFRITEEKIFADIFHYIEFLFRMIKPQKVFFMAVDGV 88
Query: 111 APRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCIL 170
APRAKMNQ R RRFR++K+ + E + EKL
Sbjct: 89 APRAKMNQ-------------------QRGRRFRSAKDAEKMELEAKKKGEKL------- 122
Query: 171 PPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
P+ E+ FDSNCITPGT FMA L L Y++ +++ D WK K+ILS P
Sbjct: 123 -PDVER---FDSNCITPGTEFMARLHEQLKYFVVSKVSTDNMWKKCKIILSGHETP 174
>gi|308160579|gb|EFO63060.1| 5'-3' exoribonuclease 2 [Giardia lamblia P15]
Length = 900
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/191 (40%), Positives = 103/191 (53%), Gaps = 34/191 (17%)
Query: 48 PNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAI 107
P G DNLY D NG+IHPC HPE +P P+ E E+ IF+ IDR+ + RPR+LLY+A+
Sbjct: 39 PLGFAIDNLYFDTNGLIHPCFHPEGRPQPETEAEVFEEIFQVIDRVVSVCRPRRLLYLAV 98
Query: 108 DGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADG 167
DG APRAK+NQ RSRRF A+ E +I + A+ R + G
Sbjct: 99 DGPAPRAKLNQ-------------------QRSRRFMAAYE--RQIKQRAQERRHMNL-G 136
Query: 168 CILPPEKEKG------------SHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKG 215
P K+ G + DSN ITPGTPFM+ LS L YY+ +R N W+
Sbjct: 137 DTEPSLKKLGFEENKAMDTFTENALDSNAITPGTPFMSRLSVALKYYVANRQANSKLWRH 196
Query: 216 IKVILSDANVP 226
+ V+ +DA P
Sbjct: 197 LTVLYADAWSP 207
>gi|159115185|ref|XP_001707816.1| 5'-3' exoribonuclease 2 [Giardia lamblia ATCC 50803]
gi|157435923|gb|EDO80142.1| 5'-3' exoribonuclease 2 [Giardia lamblia ATCC 50803]
Length = 902
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/190 (41%), Positives = 103/190 (54%), Gaps = 30/190 (15%)
Query: 48 PNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAI 107
P G DNLY D NG+IHPC HPE +P P+ E E+ IF+ IDR+ I RPR+LLY+A+
Sbjct: 39 PLGFAIDNLYFDTNGLIHPCFHPEGRPQPETEAEVFEEIFQVIDRVVSICRPRRLLYLAV 98
Query: 108 DGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKE-TAEKIAEVARIREKLLAD 166
DG APRAK+NQ RSRRF A+ E ++ A+ R+ L D
Sbjct: 99 DGPAPRAKLNQ-------------------QRSRRFMAAYERQIKQRAQERRLMNMNLGD 139
Query: 167 G--CILPPEKEKGSH--------FDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGI 216
+ E+G+ DSN ITPGTPFM+ LS L YY+ +R N W+ +
Sbjct: 140 AEPSLKKLSFEEGNAMDTSTENVLDSNAITPGTPFMSRLSVALKYYVANRQANSKLWRHL 199
Query: 217 KVILSDANVP 226
V+ +DA P
Sbjct: 200 TVLYADAWSP 209
>gi|167516040|ref|XP_001742361.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778985|gb|EDQ92599.1| predicted protein [Monosiga brevicollis MX1]
Length = 290
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/180 (42%), Positives = 101/180 (56%), Gaps = 38/180 (21%)
Query: 52 EFDNLYLDMNGIIHPCTHPED---KPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAID 108
EFDN YLD NGI+H CTH + + + + +MM+AIF I LF I+RP++LLY+AID
Sbjct: 28 EFDNFYLDFNGIVHNCTHGNEGDVRKSSQVTQDMMMAIFHEIQTLFDIIRPQRLLYIAID 87
Query: 109 GVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASK--ETAEKIAEVARIREKLLAD 166
GVAPRAKM Q R RRF+A++ E A++I V
Sbjct: 88 GVAPRAKMQQ-------------------QRQRRFKATRDSEAAQQITAV---------- 118
Query: 167 GCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
+ PP E+ HFDSNCITPGT FM L L Y+I +L D W+ ++V+LS VP
Sbjct: 119 --VAPPMPEE--HFDSNCITPGTEFMDLLQRHLVYFIQRKLEEDDDWRKVEVVLSGHQVP 174
>gi|118355816|ref|XP_001011167.1| XRN2 [Tetrahymena thermophila]
gi|89292934|gb|EAR90922.1| XRN 5'-3' exonuclease N-terminus family protein [Tetrahymena
thermophila SB210]
Length = 1065
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/192 (42%), Positives = 106/192 (55%), Gaps = 31/192 (16%)
Query: 41 FDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDE--DEMMVAIFECIDRLFRIVR 98
FD+ NP E DNLYLDMNGIIHPC + P +M IF +D+L + R
Sbjct: 28 FDAESNNP---EIDNLYLDMNGIIHPCCRSDGSVVPIAHTIQDMFNNIFLYVDKLMDLCR 84
Query: 99 PRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAE----KIA 154
P+K+LYMAIDGVAPRAKMNQ R+RRF+ +KE E K
Sbjct: 85 PKKILYMAIDGVAPRAKMNQ-------------------QRARRFKGAKEAVELQQKKEE 125
Query: 155 EVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWK 214
+ RE+ + +L + + FD+N ITPGT FM LS L +Y+ +R+N P +K
Sbjct: 126 LLNEFRERSEINDDVLAFVQNR---FDTNVITPGTAFMRDLSMALQHYVIERMNKHPLFK 182
Query: 215 GIKVILSDANVP 226
IKVI SDA++P
Sbjct: 183 DIKVIFSDASIP 194
>gi|384488412|gb|EIE80592.1| 5'-3' exoribonuclease 1 [Rhizopus delemar RA 99-880]
Length = 1739
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/177 (42%), Positives = 103/177 (58%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHP-EDKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGI+H C+H D P + E+++ IF+ +D LF ++P+KL ++AIDG
Sbjct: 504 EFDNLYLDMNGIVHNCSHNNSDDPHYRITEEQIWRGIFQYMDHLFSKIKPKKLFFVAIDG 563
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ RSRRFR +K+ + R+K LA G
Sbjct: 564 VAPRAKMNQ-------------------QRSRRFRTAKDAEDA-------RQKALAKGEE 597
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP + FD+NCITPGT FM L+ L Y+I +++ D W+ +++ILS VP
Sbjct: 598 LPEQDP----FDTNCITPGTEFMIKLTQQLRYFISKKVSEDADWRNVQIILSGPEVP 650
>gi|380020587|ref|XP_003694164.1| PREDICTED: 5'-3' exoribonuclease 1-like [Apis florea]
Length = 1627
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/178 (44%), Positives = 104/178 (58%), Gaps = 34/178 (19%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLD+NGIIH C+HP+D E+ + IF I LF +++P+KL ++AIDG
Sbjct: 28 EFDNLYLDLNGIIHECSHPDDTDVTFRISEEIIFKNIFRYIQVLFCMIQPQKLFFIAIDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIRE-KLLADGC 168
VAPRAK+NQ RSRRF+A+K+ A+I+E K A G
Sbjct: 88 VAPRAKINQ-------------------QRSRRFKAAKD--------AQIQEAKAKAKGI 120
Query: 169 ILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP EK FDSNCITPGT FM+ L L Y+I +++ D W+ KVILS + VP
Sbjct: 121 NLPKEKR----FDSNCITPGTLFMSKLDEQLKYFITYKISTDKLWQKCKVILSGSQVP 174
>gi|347831559|emb|CCD47256.1| similar to 5'-3' exoribonuclease 1 [Botryotinia fuckeliana]
Length = 1389
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/177 (41%), Positives = 100/177 (56%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFD LYLDMNGIIH CTH + A E++M +AIF I+ L+ ++P++L YMA+DG
Sbjct: 28 EFDCLYLDMNGIIHNCTHKDSDDATFRMTEEQMFIAIFNYIEHLYGKIKPKQLFYMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R+RRFR + +V REK + +G
Sbjct: 88 VAPRAKMNQ-------------------QRARRFRTA-------LDVENAREKAIKEGKE 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
+P E FDSN ITPGT FM L+ L Y+I +++ D W+G +++LS VP
Sbjct: 122 MPKE----DAFDSNSITPGTEFMQKLTLQLKYFIAKKISEDVDWQGTEIVLSGHEVP 174
>gi|147771605|emb|CAN69284.1| hypothetical protein VITISV_028679 [Vitis vinifera]
Length = 321
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/147 (54%), Positives = 96/147 (65%), Gaps = 20/147 (13%)
Query: 80 DEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMR 139
+++ +IF+ ID LF +VRPR+LLYMAIDGVAPRAKMNQ R
Sbjct: 30 NDVFKSIFDYIDHLFSLVRPRRLLYMAIDGVAPRAKMNQ-------------------QR 70
Query: 140 SRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACL 199
SRRFRA+K+ AE AE R+R++ +G +L P KEK DSN ITPGT FMA LS L
Sbjct: 71 SRRFRAAKDAAEAEAEEERLRKEFEVEGKMLSP-KEKPETSDSNVITPGTKFMAVLSVAL 129
Query: 200 HYYIHDRLNNDPGWKGIKVILSDANVP 226
YYIH RLN +PGW KVILSD+NVP
Sbjct: 130 QYYIHSRLNRNPGWCSTKVILSDSNVP 156
>gi|66514180|ref|XP_393481.2| PREDICTED: 5'-3' exoribonuclease 1 isoform 1 [Apis mellifera]
Length = 1633
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/178 (44%), Positives = 104/178 (58%), Gaps = 34/178 (19%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLD+NGIIH C+HP+D E+ + IF I LF +++P+KL ++AIDG
Sbjct: 28 EFDNLYLDLNGIIHECSHPDDTDITFRISEEIIFKNIFRYIQVLFCMIQPQKLFFIAIDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIRE-KLLADGC 168
VAPRAK+NQ RSRRF+A+K+ A+I+E K A G
Sbjct: 88 VAPRAKINQ-------------------QRSRRFKAAKD--------AQIQEAKARAKGI 120
Query: 169 ILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP EK FDSNCITPGT FM+ L L Y+I +++ D W+ KVILS + VP
Sbjct: 121 NLPKEKR----FDSNCITPGTLFMSKLDEQLKYFITYKISTDKLWQKCKVILSGSQVP 174
>gi|123477106|ref|XP_001321722.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
gi|121904554|gb|EAY09499.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
Length = 702
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/192 (41%), Positives = 112/192 (58%), Gaps = 31/192 (16%)
Query: 42 DSSKPNPN---GMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVR 98
D S+PNPN +EFDNLYLDMNG+IHPC HP+++ PK E+ + + +DR+F +VR
Sbjct: 29 DPSQPNPNTEGDVEFDNLYLDMNGLIHPCYHPKNQEHPKTYLEVFQNVEKYVDRIFNLVR 88
Query: 99 PRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAE----KIA 154
PRK+L+MA+DGVAPRAKMNQ R RRF A+K++ +
Sbjct: 89 PRKVLFMAVDGVAPRAKMNQ-------------------QRIRRFCAAKDSEYNRYMQCQ 129
Query: 155 EVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWK 214
+++ +E++ I+ P+ S D+N ITPGT FM LS + I+ + P W
Sbjct: 130 DLSITKEEI---DEIMDPQTIIQS--DTNTITPGTEFMMQLSDYITEMINRKQKTSPAWS 184
Query: 215 GIKVILSDANVP 226
I VI SDA+VP
Sbjct: 185 NIAVIFSDASVP 196
>gi|189209730|ref|XP_001941197.1| 5'-3' exoribonuclease 2 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187977290|gb|EDU43916.1| 5'-3' exoribonuclease 2 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 1391
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/169 (42%), Positives = 100/169 (59%), Gaps = 32/169 (18%)
Query: 60 MNGIIHPCTH--PEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMN 117
MNGIIH CTH + A K ED+M ++IF I+ LF ++P++L +MAIDGVAPRAKMN
Sbjct: 1 MNGIIHNCTHNDSDSVTARKSEDQMFISIFNYIEHLFGKIKPKQLFFMAIDGVAPRAKMN 60
Query: 118 QPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKG 177
Q R+RRFR + +T + REK + +G +P E+
Sbjct: 61 Q-------------------QRARRFRTALDT-------EKAREKAIREGVEMPTEEA-- 92
Query: 178 SHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
FDSNCITPGT FMA L+ L Y+I+ +++ D W+G++V+LS VP
Sbjct: 93 --FDSNCITPGTAFMAKLTQQLKYFINKKVSEDIDWQGVEVVLSGHEVP 139
>gi|440793174|gb|ELR14365.1| Exonuclease ii, putative [Acanthamoeba castellanii str. Neff]
Length = 1421
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 76/170 (44%), Positives = 94/170 (55%), Gaps = 34/170 (20%)
Query: 60 MNGIIHPCTHPE--DKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKM 116
MNGIIH CTHPE D K E EM++ IF IDRLF V+P+KL+Y+AIDGVAPRAKM
Sbjct: 1 MNGIIHNCTHPEWNDNVLNKLSEKEMIIQIFHYIDRLFHAVKPQKLIYLAIDGVAPRAKM 60
Query: 117 NQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEK 176
NQ R RR R ++E+ E + + EK+ D
Sbjct: 61 NQ-------------------QRQRRLRTAQESKEALEKARETGEKVQED---------- 91
Query: 177 GSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
FDSNCITPGT FMA LS L Y+I ++ D W+ ++VILS VP
Sbjct: 92 --MFDSNCITPGTEFMAKLSDYLKYFIRKKIKEDSAWRKVEVILSGHEVP 139
>gi|340729609|ref|XP_003403090.1| PREDICTED: LOW QUALITY PROTEIN: 5'-3' exoribonuclease 1-like
[Bombus terrestris]
Length = 1626
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 77/178 (43%), Positives = 103/178 (57%), Gaps = 34/178 (19%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLD+NGIIH C+HP+D E+ + IF I+ LFR+++P+KL ++A+DG
Sbjct: 28 EFDNLYLDVNGIIHDCSHPDDMDITFRISEETIFKNIFHYIEVLFRMIQPQKLFFIAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIRE-KLLADGC 168
VAPRAK+NQ RSRRF+ +K+ A+I+E K G
Sbjct: 88 VAPRAKINQ-------------------QRSRRFKNAKD--------AKIQEDKAKIKGT 120
Query: 169 ILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP EK FDSNCITPGT FM+ L L Y+I +++ D W+ KVI S + VP
Sbjct: 121 TLPKEKR----FDSNCITPGTVFMSKLDEQLKYFITYKISTDKLWQKCKVIFSGSQVP 174
>gi|154317858|ref|XP_001558248.1| hypothetical protein BC1G_02912 [Botryotinia fuckeliana B05.10]
Length = 185
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 74/177 (41%), Positives = 100/177 (56%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTH--PEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFD LYLDMNGIIH CTH +D E++M +AIF I+ L+ ++P++L YMA+DG
Sbjct: 28 EFDCLYLDMNGIIHNCTHKDSDDATFRMTEEQMFIAIFNYIEHLYGKIKPKQLFYMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R+RRFR + +V REK + +G
Sbjct: 88 VAPRAKMNQQ-------------------RARRFRTA-------LDVENAREKAIKEGKE 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
+P E FDSN ITPGT FM L+ L Y+I +++ D W+G +++LS VP
Sbjct: 122 MPKE----DAFDSNSITPGTEFMQKLTLQLKYFIAKKISEDVDWQGTEIVLSGHEVP 174
>gi|452820477|gb|EME27519.1| 5'-3' exoribonuclease [Galdieria sulphuraria]
Length = 1343
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 73/177 (41%), Positives = 96/177 (54%), Gaps = 36/177 (20%)
Query: 55 NLYLDMNGIIHPCTHPEDKPAP-----KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
N YLD NGI+H C P+D P E+E+ + F ID LF +VRP++L+Y+AIDG
Sbjct: 31 NFYLDANGILHNCARPKDSQEPFPCQYPSEEEIFLETFNYIDMLFSMVRPKRLVYIAIDG 90
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R+RRFR +K+ A+++ E + G
Sbjct: 91 VAPRAKMNQ-------------------QRARRFRTAKDRAQEM-------ENRIKQGKP 124
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
+P FDSNCITPGT FMA S L Y +H ++ D W ++VILS NVP
Sbjct: 125 VPQR-----FFDSNCITPGTHFMASFSEALEYLVHKKITEDKSWATVEVILSTTNVP 176
>gi|195457130|ref|XP_002075439.1| GK17975 [Drosophila willistoni]
gi|194171524|gb|EDW86425.1| GK17975 [Drosophila willistoni]
Length = 1638
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 101/177 (57%), Gaps = 33/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGI+H C+HP+D +ED++ IF +++LF +++P+KL ++++DG
Sbjct: 28 EFDNLYLDMNGIVHNCSHPDDANIHFHLEEDQIFQDIFNYVEKLFHLIKPQKLFFLSVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ RSRRFR ++E AE++ A R
Sbjct: 88 VAPRAKMNQ-------------------QRSRRFRTARE-AEQLETKASQR--------- 118
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
EK + FDSNCITPGT FM L L ++ +++ DP W+ +VILS P
Sbjct: 119 --GEKRQHERFDSNCITPGTVFMERLQLALRSFLRTKISLDPLWQKCRVILSGEETP 173
>gi|301762972|ref|XP_002916907.1| PREDICTED: LOW QUALITY PROTEIN: 5'-3' exoribonuclease 1-like
[Ailuropoda melanoleuca]
Length = 1703
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 75/177 (42%), Positives = 100/177 (56%), Gaps = 35/177 (19%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+HP D +D++ IF ++ LFRI++PRK+ +MA+DG
Sbjct: 28 EFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R RRFR++KE +KI +K L G
Sbjct: 88 VAPRAKMNQ-------------------QRGRRFRSAKEAEDKI-------KKALEKGET 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP E + FDSNCITPGT FMA L L Y+++ +++ +G+ + S P
Sbjct: 122 LPTE----ARFDSNCITPGTEFMARLHEHLKYFVNMKISTX---QGVTIYFSGHETP 171
>gi|298713577|emb|CBJ27105.1| dhm exonuclease [Ectocarpus siliculosus]
Length = 709
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 78/182 (42%), Positives = 105/182 (57%), Gaps = 32/182 (17%)
Query: 47 NPNGMEFDNLYLDMNGIIHPCTHP-EDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYM 105
N + DNLYLDMNG+IH CTH +D+ +E EM IF DR+F++VRPR+LLY+
Sbjct: 156 NEHTAPIDNLYLDMNGVIHMCTHHNDDEFIELNEKEMFRRIFIFTDRMFKLVRPRRLLYL 215
Query: 106 AIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLA 165
A+DG APRAKMNQ RSRRFR+SKE +AE+ ++
Sbjct: 216 AVDGTAPRAKMNQ-------------------QRSRRFRSSKEAEVNMAEM------VMR 250
Query: 166 DGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGW-KGIKVILSDAN 224
DG + PE + FDSNCITPGT FM L+ +I +++ DP W + +V+ S +
Sbjct: 251 DGKL--PEVTR---FDSNCITPGTDFMFKLTKAFQAWIEYKMDTDPFWQQNARVVFSGPD 305
Query: 225 VP 226
VP
Sbjct: 306 VP 307
>gi|156050179|ref|XP_001591051.1| hypothetical protein SS1G_07676 [Sclerotinia sclerotiorum 1980]
gi|154692077|gb|EDN91815.1| hypothetical protein SS1G_07676 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 1390
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 73/177 (41%), Positives = 101/177 (57%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTH--PEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFD LYLDMNGIIH CTH +D E++M +AIF I+ L+ ++P++L +MA+DG
Sbjct: 28 EFDCLYLDMNGIIHNCTHKDSDDATFRMTEEQMFIAIFNYIEHLYGKIKPKQLFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R+RRFR + +V REK + +G
Sbjct: 88 VAPRAKMNQ-------------------QRARRFRTA-------LDVENAREKAIREGKE 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
+P E+ FDSN ITPGT FM L+ L Y+I +++ D W+G +++LS VP
Sbjct: 122 MPKEEA----FDSNSITPGTEFMQKLTLQLKYFIAKKISEDVDWQGTEIVLSGHEVP 174
>gi|407409729|gb|EKF32447.1| 5'-3' exonuclease XRNA, putative [Trypanosoma cruzi marinkellei]
Length = 807
Score = 133 bits (335), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 86/203 (42%), Positives = 114/203 (56%), Gaps = 32/203 (15%)
Query: 30 LPQEV-----NGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTH-PEDKPAPKDEDEMM 83
+P+EV NGQ +P S FDN YLDMNG+IHPC H P P+ E+EM
Sbjct: 21 VPEEVVKAALNGQPLPVSSDATQ----RFDNFYLDMNGLIHPCCHDTAPLPEPETEEEMF 76
Query: 84 VAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRF 143
IF +D L++IVRPRK L + IDGVAP++KMNQ RSRRF
Sbjct: 77 ERIFAQVDLLYKIVRPRKCLVLCIDGVAPQSKMNQ-------------------QRSRRF 117
Query: 144 RASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYI 203
RA++E E A+ E ++ G LPP + + S +D N ITP TPFM + + ++I
Sbjct: 118 RAAEERIEGEVFSAQCAEDVVKKG--LPPPQTR-SRWDHNVITPSTPFMERVGLAIEWFI 174
Query: 204 HDRLNNDPGWKGIKVILSDANVP 226
++N DP W+ I VI SDA+VP
Sbjct: 175 MKKINEDPAWRHIAVIFSDAHVP 197
>gi|195398773|ref|XP_002057995.1| GJ15840 [Drosophila virilis]
gi|194150419|gb|EDW66103.1| GJ15840 [Drosophila virilis]
Length = 1656
Score = 133 bits (335), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 73/177 (41%), Positives = 103/177 (58%), Gaps = 33/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGI+H C+HP+D +E ++ I+ ID+LF +++P+KL ++A+DG
Sbjct: 28 EFDNLYLDMNGIVHNCSHPDDNNIHFHLEEPQIFQDIYNYIDKLFYLIKPQKLFFLAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ RSRRFR+++E AE+ + K L G
Sbjct: 88 VAPRAKMNQ-------------------QRSRRFRSARE-----AEM--LEAKALQRG-- 119
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
E+ + FDSNCITPGT FMA L L ++ +++ DP W+ ++ILS P
Sbjct: 120 ---ERREHERFDSNCITPGTEFMARLQLGLRCFLRTKISTDPLWQKCRIILSGQETP 173
>gi|159474632|ref|XP_001695429.1| single-stranded RNA 5'->3' exonuclease [Chlamydomonas reinhardtii]
gi|158275912|gb|EDP01687.1| single-stranded RNA 5'->3' exonuclease [Chlamydomonas reinhardtii]
Length = 171
Score = 132 bits (333), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 76/174 (43%), Positives = 99/174 (56%), Gaps = 32/174 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKP-APKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGV 110
E DNLYLDMNGIIH CTH K E++MM+ +F+ +D+L +IVRP+KLL+MAIDGV
Sbjct: 29 EMDNLYLDMNGIIHNCTHANRKDIGGVTEEDMMLKVFDYLDKLVQIVRPQKLLFMAIDGV 88
Query: 111 APRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCIL 170
APRAKMNQ RSRRF+++ E + E R G ++
Sbjct: 89 APRAKMNQ-------------------QRSRRFKSAMERLKNEEEQRR-------KGEVV 122
Query: 171 PPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDAN 224
P + FDSNCITPGT FMA L L ++I ++ DP W+ V+ S N
Sbjct: 123 PDDA-----FDSNCITPGTEFMARLGKHLRFFIRRKMAEDPLWQKPNVVFSGRN 171
>gi|383853936|ref|XP_003702478.1| PREDICTED: 5'-3' exoribonuclease 1-like [Megachile rotundata]
Length = 1665
Score = 132 bits (333), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 76/178 (42%), Positives = 104/178 (58%), Gaps = 34/178 (19%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLD+NGIIH C+HP D E+++ IF I+ LFR+++P+KL ++AIDG
Sbjct: 28 EFDNLYLDVNGIIHGCSHPNDAEVSFRITEEDIFKNIFRYIELLFRMIQPQKLFFIAIDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIRE-KLLADGC 168
VAPRAK+NQ R RRFRA+K+ A I+E K A+G
Sbjct: 88 VAPRAKINQ-------------------QRGRRFRAAKD--------AEIQEAKARAEGI 120
Query: 169 ILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
+P EK FDSN ITPGT FM ++ L Y++ ++++D W+ KVI S + VP
Sbjct: 121 EIPKEK----RFDSNAITPGTAFMYKVNEHLRYFVTYKISSDKLWQKCKVIFSGSEVP 174
>gi|322703736|gb|EFY95340.1| exonuclease Kem1 [Metarhizium anisopliae ARSEF 23]
Length = 1404
Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 75/172 (43%), Positives = 100/172 (58%), Gaps = 33/172 (19%)
Query: 58 LDMNGIIHPCTHP---EDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRA 114
LDMNGIIH CTH ED E+EM + IF I+ LF ++P++L +MAIDGVAPRA
Sbjct: 19 LDMNGIIHNCTHKDAGEDVSFRLSEEEMFIRIFNYIEHLFGKIKPKQLFFMAIDGVAPRA 78
Query: 115 KMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCILPPEK 174
KMNQ R+RRFR + + AEK REK + +G +P E+
Sbjct: 79 KMNQ-------------------QRARRFRTALD-AEKA------REKAIKEGVEMPKEE 112
Query: 175 EKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
FDSNCITPGT FMA LS L Y+++ +++ D W+G +++LS VP
Sbjct: 113 P----FDSNCITPGTEFMAKLSQQLRYFVNKKVSEDADWQGCEIVLSGHEVP 160
>gi|312371117|gb|EFR19377.1| hypothetical protein AND_22598 [Anopheles darlingi]
Length = 380
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/177 (41%), Positives = 95/177 (53%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMV--AIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+HP D E M+ IF ++ LF+++RP+K+ ++A+DG
Sbjct: 28 EFDNLYLDMNGIIHNCSHPNDADVTYRISEEMIFEGIFHYVEYLFKMIRPQKVFFIAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R RRFR++ E E++ +A G
Sbjct: 88 VAPRAKMNQQ-------------------RGRRFRSAHEAGEQLKAA-------IAKGET 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
+P E FDSNCITPGT FM L L ++I ++ D WK VILS P
Sbjct: 122 IPDE----DRFDSNCITPGTAFMVRLQKALEHFIQVKIATDILWKACTVILSGHETP 174
>gi|320169726|gb|EFW46625.1| Dhm2 protein [Capsaspora owczarzaki ATCC 30864]
Length = 1615
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/169 (43%), Positives = 97/169 (57%), Gaps = 32/169 (18%)
Query: 60 MNGIIHPCTHPED-KPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMN 117
MNGIIH C+HP D P+ + ED++ IF ID LF I+RP++ +MA+DGVAPRAKMN
Sbjct: 1 MNGIIHNCSHPNDVDPSFRITEDKIFAEIFAYIDHLFNIIRPQRTFFMAVDGVAPRAKMN 60
Query: 118 QPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKG 177
Q R+RRFR++KE K+AE R + + PE E
Sbjct: 61 Q-------------------QRARRFRSAKENESKLAEARRSGKPI--------PETEP- 92
Query: 178 SHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
FDSNCITPGT FM+ LS L Y+I ++ D W+ ++VILS +P
Sbjct: 93 --FDSNCITPGTAFMSKLSVQLKYFISRKITTDRAWRNVEVILSGHEIP 139
>gi|401405148|ref|XP_003882024.1| putative 5'-3' exonuclease [Neospora caninum Liverpool]
gi|325116438|emb|CBZ51991.1| putative 5'-3' exonuclease [Neospora caninum Liverpool]
Length = 2070
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 96/178 (53%), Gaps = 22/178 (12%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPA-PKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGV 110
EFDNLYLDMNGI+H C+H + ED M V +F +D + V P+K L +A DGV
Sbjct: 28 EFDNLYLDMNGILHTCSHGNSGGMLHESEDAMWVDVFAALDLIISTVNPKKFLVLAADGV 87
Query: 111 APRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAE--KIAEVARIREKLLADGC 168
APRAKMNQ R+RR+RA+K+ AE + E R+ +
Sbjct: 88 APRAKMNQ-------------------QRARRYRAAKDAAELARQKEEHRLLKMQRKQDK 128
Query: 169 ILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
P G HFDSNCI+PGT FMA L ++ +LN D WK +KV+LS +VP
Sbjct: 129 SAPQSPPSGGHFDSNCISPGTEFMAKFFRHLRFFCEKKLNEDARWKHLKVVLSGPDVP 186
>gi|115446147|ref|NP_001046853.1| Os02g0481900 [Oryza sativa Japonica Group]
gi|47848619|dbj|BAD22468.1| putative 5'-3' exoribonuclease [Oryza sativa Japonica Group]
gi|113536384|dbj|BAF08767.1| Os02g0481900 [Oryza sativa Japonica Group]
Length = 822
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/195 (43%), Positives = 104/195 (53%), Gaps = 46/195 (23%)
Query: 40 PFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKP-------APKDEDEMMVAIFECIDR 92
P S+P + +DNLYLDMN IIH HP+D+ AP E+ ++F+ +DR
Sbjct: 20 PAKESRPADGIVVYDNLYLDMNQIIHYSFHPQDQMNAGTDVCAPTTVSEVFESMFDYLDR 79
Query: 93 LFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEK 152
LFRIVRPR+LLY+A+DGVAP AKMN + R RRF + E
Sbjct: 80 LFRIVRPRRLLYLAVDGVAPCAKMN------------------GMRRGRRFAWASEE--- 118
Query: 153 IAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLN-NDP 211
E+ +I E + D N ITPGT FM +S L YYI RLN +DP
Sbjct: 119 -EEMQKISEGVS----------------DPNVITPGTEFMEKISQALTYYIRARLNSSDP 161
Query: 212 GWKGIKVILSDANVP 226
GWK I VILSDANVP
Sbjct: 162 GWKHIMVILSDANVP 176
>gi|218190750|gb|EEC73177.1| hypothetical protein OsI_07223 [Oryza sativa Indica Group]
Length = 790
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/195 (43%), Positives = 104/195 (53%), Gaps = 46/195 (23%)
Query: 40 PFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKP-------APKDEDEMMVAIFECIDR 92
P S+P + +DNLYLDMN IIH HP+D+ AP E+ ++F+ +DR
Sbjct: 20 PAKESRPADGIVVYDNLYLDMNQIIHYSFHPQDQMNAGTDVCAPTTVSEVFESMFDYLDR 79
Query: 93 LFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEK 152
LFRIVRPR+LLY+A+DGVAP AKMN + R RRF + E
Sbjct: 80 LFRIVRPRRLLYLAVDGVAPCAKMN------------------GMRRGRRFAWASEE--- 118
Query: 153 IAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLN-NDP 211
E+ +I E + D N ITPGT FM +S L YYI RLN +DP
Sbjct: 119 -EEMQKISEGVS----------------DPNVITPGTEFMEKISQALTYYIRARLNSSDP 161
Query: 212 GWKGIKVILSDANVP 226
GWK I VILSDANVP
Sbjct: 162 GWKHIMVILSDANVP 176
>gi|71665066|ref|XP_819507.1| 5'-3' exonuclease XRND [Trypanosoma cruzi strain CL Brener]
gi|70884811|gb|EAN97656.1| 5'-3' exonuclease XRND, putative [Trypanosoma cruzi]
Length = 807
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/203 (41%), Positives = 112/203 (55%), Gaps = 32/203 (15%)
Query: 30 LPQEV-----NGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTH-PEDKPAPKDEDEMM 83
+P+EV +GQ +P S FDN YLDMNG+IHPC H P P+ E+EM
Sbjct: 21 VPEEVVKAALDGQPLPASSD----TTQRFDNFYLDMNGLIHPCCHDTAPLPEPESEEEMF 76
Query: 84 VAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRF 143
IF +D L++IVRPRK L + IDGVAP++KMNQ RSRRF
Sbjct: 77 ERIFAQVDLLYKIVRPRKCLVLCIDGVAPQSKMNQ-------------------QRSRRF 117
Query: 144 RASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYI 203
RA++E E A+ E ++ G LP + S +D N ITP TPFM + + ++I
Sbjct: 118 RAAEERIESEVFSAQCAEDVVKKGLPLPQTR---SRWDHNVITPSTPFMERVGLAIEWFI 174
Query: 204 HDRLNNDPGWKGIKVILSDANVP 226
++N DP W+ I VI SDA+VP
Sbjct: 175 MKKINEDPAWRHIAVIFSDAHVP 197
>gi|385303536|gb|EIF47602.1| 5 -3 exoribonuclease 1 [Dekkera bruxellensis AWRI1499]
Length = 174
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/187 (40%), Positives = 104/187 (55%), Gaps = 42/187 (22%)
Query: 32 QEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPK-DEDEMMVAIFECI 90
QEV+GQ++ +EFDN+YLDMN I+H CTH D E++M AIF I
Sbjct: 19 QEVDGQEM-----------IEFDNMYLDMNSILHNCTHTNDGTIIHLSEEQMFGAIFAYI 67
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA 150
D LF +++P+K+ YMAIDGVAPRAKMNQ R+RRFR++ E
Sbjct: 68 DHLFNLIKPKKVFYMAIDGVAPRAKMNQ-------------------QRARRFRSAVEAE 108
Query: 151 EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
+ +K + G +P E + FDSN ITPGT FMA ++ L YYI+ +++ D
Sbjct: 109 XNM-------KKAIERGDEIPKE----APFDSNAITPGTDFMAKVTEHLKYYINQKVSTD 157
Query: 211 PGWKGIK 217
W+ I+
Sbjct: 158 SNWQSIQ 164
>gi|407849157|gb|EKG03993.1| 5'-3' exonuclease XRNA, putative [Trypanosoma cruzi]
Length = 383
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/203 (41%), Positives = 113/203 (55%), Gaps = 32/203 (15%)
Query: 30 LPQEV-----NGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTH-PEDKPAPKDEDEMM 83
+P+EV +GQ +P S FDN YLDMNG+IHPC H P P+ E+EM
Sbjct: 21 VPEEVVKAALDGQPLPASSDTTQ----RFDNFYLDMNGLIHPCCHDTAPLPEPESEEEMF 76
Query: 84 VAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRF 143
IF +D L++IVRPRK L + IDGVAP++KMNQ RSRRF
Sbjct: 77 ERIFAQVDLLYKIVRPRKCLVLCIDGVAPQSKMNQ-------------------QRSRRF 117
Query: 144 RASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYI 203
RA++E E A+ E+++ G LP + S +D N ITP TPFM + + ++I
Sbjct: 118 RAAEERIESEVFSAQCAEEVVKKGLPLPQTR---SRWDHNVITPSTPFMERVGLAIEWFI 174
Query: 204 HDRLNNDPGWKGIKVILSDANVP 226
++N DP W+ I VI SDA+VP
Sbjct: 175 MKKINEDPAWRHIAVIFSDAHVP 197
>gi|413918977|gb|AFW58909.1| hypothetical protein ZEAMMB73_438738 [Zea mays]
Length = 795
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 104/193 (53%), Gaps = 45/193 (23%)
Query: 42 DSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDED--------EMMVAIFECIDRL 93
D + P+G+ +DNLYLDMN IIH C HP+D+ D D E+ ++FE +DRL
Sbjct: 23 DEPEECPDGIIYDNLYLDMNCIIHCCFHPQDQLTHADIDVRPPTTANEVFESMFEYMDRL 82
Query: 94 FRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKI 153
FRIVRP LLY+A+DGVAP AKMN+ +R RF ++ E++
Sbjct: 83 FRIVRPTSLLYLAVDGVAPFAKMNR-------------------IRRGRFHSA---MERL 120
Query: 154 AEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGW 213
AE P +E D N I+PGT FM +S L YYI R N+DP W
Sbjct: 121 AE---------------EPPREISEVSDPNVISPGTEFMEKVSEALEYYIRARFNSDPWW 165
Query: 214 KGIKVILSDANVP 226
+ I VILSDA+VP
Sbjct: 166 RDIMVILSDASVP 178
>gi|195479788|ref|XP_002101029.1| GE17387 [Drosophila yakuba]
gi|194188553|gb|EDX02137.1| GE17387 [Drosophila yakuba]
Length = 1581
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/177 (38%), Positives = 99/177 (55%), Gaps = 33/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGI+H C+HP+D +E ++ IF +D+LF +++P++L ++A+DG
Sbjct: 28 EFDNLYLDMNGIVHNCSHPDDNNIHFHLEEHQIFQDIFNYVDKLFYLIKPQRLFFLAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ RSRRFR+++E + A+ A+
Sbjct: 88 VAPRAKMNQ-------------------QRSRRFRSAREAEQLEAKAAQ----------- 117
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
E+ + FDSNCITPGT FM L L ++ +++ DP W+ VILS P
Sbjct: 118 -RGERREHERFDSNCITPGTEFMVRLQEGLRAFLKTKISTDPLWQRCSVILSGQETP 173
>gi|194892948|ref|XP_001977773.1| GG18055 [Drosophila erecta]
gi|190649422|gb|EDV46700.1| GG18055 [Drosophila erecta]
Length = 1583
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/177 (38%), Positives = 99/177 (55%), Gaps = 33/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGI+H C+HP+D +E ++ IF +D+LF +++P++L ++A+DG
Sbjct: 28 EFDNLYLDMNGIVHNCSHPDDNNIHFHLEEHQIFQDIFNYVDKLFYLIKPQRLFFLAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ RSRRFR+++E + A+ A+
Sbjct: 88 VAPRAKMNQ-------------------QRSRRFRSAREAEQLEAKAAQ----------- 117
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
E+ + FDSNCITPGT FM L L ++ +++ DP W+ VILS P
Sbjct: 118 -RGERREHERFDSNCITPGTEFMVRLQEGLRAFLKTKISTDPLWQQCSVILSGQETP 173
>gi|294951471|ref|XP_002786997.1| 5'->3' exoribonuclease, putative [Perkinsus marinus ATCC 50983]
gi|239901587|gb|EER18793.1| 5'->3' exoribonuclease, putative [Perkinsus marinus ATCC 50983]
Length = 728
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/175 (41%), Positives = 99/175 (56%), Gaps = 29/175 (16%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVA 111
EFD LYLDMNGIIH C+H + K EDE+ + IF+ I LF ++P+KLLYMA+DGVA
Sbjct: 28 EFDCLYLDMNGIIHHCSHGDTPDVAKPEDEVWMDIFKYISDLFTHIKPKKLLYMAVDGVA 87
Query: 112 PRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCILP 171
PRAKMNQ RSRRFR + + E E+ + +G
Sbjct: 88 PRAKMNQ-------------------QRSRRFRTALDAVEAT-------ERAVKNG---D 118
Query: 172 PEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
K + FDSN ITPGT FM L+ L ++ ++ +P W+G++V++S NVP
Sbjct: 119 HPKSIDTFFDSNSITPGTAFMERLTVQLRFFAQKMISENPLWQGVEVVVSGPNVP 173
>gi|221485905|gb|EEE24175.1| conserved hypothetical protein [Toxoplasma gondii GT1]
Length = 2042
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/184 (40%), Positives = 98/184 (53%), Gaps = 28/184 (15%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPA-PKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGV 110
EFDNLYLDMNGI+H C+H ED M V +F +D + V P+K L +A DGV
Sbjct: 28 EFDNLYLDMNGILHTCSHGNSGGMLHTSEDAMWVDVFAALDLIISTVNPKKFLVLAADGV 87
Query: 111 APRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAE--------KIAEVARIREK 162
APRAKMNQ R+RR+RA+K+ AE ++ ++ R ++K
Sbjct: 88 APRAKMNQ-------------------QRARRYRAAKDAAELARQKEEHRLLKMQRKQDK 128
Query: 163 LLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSD 222
A G HFDSNCI+PGT FMA L ++ +LN D WK +KV+LS
Sbjct: 129 AAAKQEKNLSAPTPGGHFDSNCISPGTEFMAKFFRHLRFFCEKKLNEDARWKDLKVVLSG 188
Query: 223 ANVP 226
+VP
Sbjct: 189 PDVP 192
>gi|237835011|ref|XP_002366803.1| 5'-3' exonuclease, putative [Toxoplasma gondii ME49]
gi|211964467|gb|EEA99662.1| 5'-3' exonuclease, putative [Toxoplasma gondii ME49]
gi|221503733|gb|EEE29417.1| 5'->3' exoribonuclease, putative [Toxoplasma gondii VEG]
Length = 2042
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/184 (40%), Positives = 98/184 (53%), Gaps = 28/184 (15%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPA-PKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGV 110
EFDNLYLDMNGI+H C+H ED M V +F +D + V P+K L +A DGV
Sbjct: 28 EFDNLYLDMNGILHTCSHGNSGGMLHTSEDAMWVDVFAALDLIISTVNPKKFLVLAADGV 87
Query: 111 APRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAE--------KIAEVARIREK 162
APRAKMNQ R+RR+RA+K+ AE ++ ++ R ++K
Sbjct: 88 APRAKMNQ-------------------QRARRYRAAKDAAELARQKEEHRLLKMQRKQDK 128
Query: 163 LLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSD 222
A G HFDSNCI+PGT FMA L ++ +LN D WK +KV+LS
Sbjct: 129 AAAKQEKNLSAPTPGGHFDSNCISPGTEFMAKFFRHLRFFCEKKLNEDARWKDLKVVLSG 188
Query: 223 ANVP 226
+VP
Sbjct: 189 PDVP 192
>gi|198471055|ref|XP_001355485.2| GA17195 [Drosophila pseudoobscura pseudoobscura]
gi|198145746|gb|EAL32544.2| GA17195 [Drosophila pseudoobscura pseudoobscura]
Length = 1533
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/177 (41%), Positives = 101/177 (57%), Gaps = 33/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGI+H C+HP+D +E ++ IF +D+LF +++P+KL ++A+DG
Sbjct: 28 EFDNLYLDMNGIVHNCSHPDDNNIHFHLEEQQIFQDIFNYVDKLFYLIKPQKLFFLAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ RSRRFR+++E AE+ + K L G
Sbjct: 88 VAPRAKMNQ-------------------QRSRRFRSARE-----AEM--LEAKALQRG-- 119
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
E+ + FDSNCITPGT FM L L ++ +++ DP W+ VILS P
Sbjct: 120 ---ERREHERFDSNCITPGTDFMERLQQGLRCFLKTKISTDPLWQKCSVILSGQETP 173
>gi|260949235|ref|XP_002618914.1| hypothetical protein CLUG_00073 [Clavispora lusitaniae ATCC 42720]
gi|238846486|gb|EEQ35950.1| hypothetical protein CLUG_00073 [Clavispora lusitaniae ATCC 42720]
Length = 1430
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/168 (42%), Positives = 93/168 (55%), Gaps = 31/168 (18%)
Query: 60 MNGIIHPCTHPEDKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQ 118
MN I+H CTH ++ + +D+M AIF ID LF I++P+++ YMAIDGVAPRAKMNQ
Sbjct: 1 MNSILHTCTHSDNDTLTRMTDDQMYAAIFNYIDHLFDIIKPKEVFYMAIDGVAPRAKMNQ 60
Query: 119 PLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGS 178
RSRRFR + E E + K ++ G ++P E
Sbjct: 61 -------------------QRSRRFRTAYEAEENL-------RKAISQGEVIPKE----D 90
Query: 179 HFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
FDSN ITPGT FMA L+ L Y+IH ++ D W IKVILS VP
Sbjct: 91 PFDSNAITPGTEFMAKLTNNLKYFIHKKITEDNRWANIKVILSGHEVP 138
>gi|195345705|ref|XP_002039409.1| GM22742 [Drosophila sechellia]
gi|194134635|gb|EDW56151.1| GM22742 [Drosophila sechellia]
Length = 1585
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 100/177 (56%), Gaps = 33/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGI+H C+HP+D +E ++ IF +D+LF +++P++L ++A+DG
Sbjct: 28 EFDNLYLDMNGIVHNCSHPDDNNIHFHLEEQQIFQEIFNYVDKLFYLIKPQRLFFLAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ RSRRFR+++E AE++ A R
Sbjct: 88 VAPRAKMNQ-------------------QRSRRFRSARE-AEQLETKAAQRG-------- 119
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
E + FDSNCITPGT FM L L ++ +++ DP W+ VILS VP
Sbjct: 120 ---EWREHERFDSNCITPGTVFMGRLQKGLRAFLKTKISTDPLWQRCSVILSGQEVP 173
>gi|294872967|ref|XP_002766468.1| 5'->3' exoribonuclease, putative [Perkinsus marinus ATCC 50983]
gi|239867348|gb|EEQ99185.1| 5'->3' exoribonuclease, putative [Perkinsus marinus ATCC 50983]
Length = 649
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/175 (41%), Positives = 99/175 (56%), Gaps = 29/175 (16%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVA 111
EFD LYLDMNGIIH C+H + K EDE+ + IF+ I LF ++P+KLLYMA+DGVA
Sbjct: 28 EFDCLYLDMNGIIHHCSHGDTPDVAKPEDEVWMDIFKYISDLFTHIKPKKLLYMAVDGVA 87
Query: 112 PRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCILP 171
PRAKMNQ RSRRFR + + E E+ + +G
Sbjct: 88 PRAKMNQ-------------------QRSRRFRTALDAVEAT-------ERAVKNG---D 118
Query: 172 PEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
K + FDSN ITPGT FM L+ L ++ ++ +P W+G++V++S NVP
Sbjct: 119 HPKSIDTFFDSNSITPGTAFMERLTVQLRFFAQKMISENPLWQGVEVVVSGPNVP 173
>gi|157119783|ref|XP_001659504.1| 5'-3' exoribonuclease, putative [Aedes aegypti]
gi|108875157|gb|EAT39382.1| AAEL008814-PA [Aedes aegypti]
Length = 1668
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/177 (42%), Positives = 101/177 (57%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPA--PKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
+FDNLYLDMNGIIH C+HP D E+++ IF ++ LFR++RP+KL ++A+DG
Sbjct: 28 DFDNLYLDMNGIIHNCSHPNDSDVFFRITEEKIFSDIFHYLEFLFRMIRPQKLFFIAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R RRFR+++E E+ E + G +
Sbjct: 88 VAPRAKMNQ-------------------QRGRRFRSAREAQEQAEEAQK-------KGEV 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP E + FDSNCITPGT FM L L ++I +++ +P WK KVILS P
Sbjct: 122 LPTE----ARFDSNCITPGTSFMVRLQKALEHFIKVKVSTNPLWKHCKVILSGHETP 174
>gi|261332676|emb|CBH15671.1| 5'-3' exoribonuclease 2, putative [Trypanosoma brucei gambiense
DAL972]
Length = 801
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 101/176 (57%), Gaps = 23/176 (13%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVA-IFECIDRLFRIVRPRKLLYMAIDGV 110
+FDNLYLD+NG++HPC H + +E M +F ID +F++VRPRK L + +DGV
Sbjct: 44 KFDNLYLDLNGLVHPCCHDTSPLPEPESEEEMFERVFTQIDLVFKVVRPRKCLILCVDGV 103
Query: 111 APRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCIL 170
AP++KMNQ RSRRFRA++E AE A+ + LL G
Sbjct: 104 APQSKMNQ-------------------QRSRRFRAAEERAEGEVMSAKCADVLLEKGLPY 144
Query: 171 PPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
P +E+ +D N ITP TPFM L + +++ ++N DP WK + V+ SDA+VP
Sbjct: 145 PKVRER---WDHNVITPSTPFMERLGLAIEWFVVKKVNEDPLWKKVAVVFSDAHVP 197
>gi|71747618|ref|XP_822864.1| 5'-3' exoribonuclease XRND [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70832532|gb|EAN78036.1| 5'-3' exoribonuclease XRND, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
Length = 801
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 101/176 (57%), Gaps = 23/176 (13%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVA-IFECIDRLFRIVRPRKLLYMAIDGV 110
+FDNLYLD+NG++HPC H + +E M +F ID +F++VRPRK L + +DGV
Sbjct: 44 KFDNLYLDLNGLVHPCCHDTSPLPEPESEEEMFERVFTQIDLVFKVVRPRKCLILCVDGV 103
Query: 111 APRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCIL 170
AP++KMNQ RSRRFRA++E AE A+ + LL G
Sbjct: 104 APQSKMNQ-------------------QRSRRFRAAEERAEGEVMSAKCADVLLEKGLPY 144
Query: 171 PPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
P +E+ +D N ITP TPFM L + +++ ++N DP WK + V+ SDA+VP
Sbjct: 145 PKVRER---WDHNVITPSTPFMERLGLAIEWFVVKKVNEDPLWKKVAVVFSDAHVP 197
>gi|358389627|gb|EHK27219.1| hypothetical protein TRIVIDRAFT_207716 [Trichoderma virens Gv29-8]
Length = 904
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 75/170 (44%), Positives = 97/170 (57%), Gaps = 33/170 (19%)
Query: 60 MNGIIHPCTHP---EDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKM 116
MNGIIH CTH ED E+EM + IF I+ LF ++P+KL +MAIDGVAPRAKM
Sbjct: 1 MNGIIHNCTHKDAGEDATFRLSEEEMFIRIFNYIEHLFGKIKPKKLFFMAIDGVAPRAKM 60
Query: 117 NQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEK 176
NQ R+RRFR + + AEK REK + +G LP E+
Sbjct: 61 NQ-------------------QRARRFRTALD-AEKA------REKAIREGIELPKEEP- 93
Query: 177 GSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
FDSNCITPGT FMA LS L Y+++ +++ D W+G ++LS VP
Sbjct: 94 ---FDSNCITPGTEFMAKLSQQLRYFVNKKVSEDTDWQGCDIVLSGHEVP 140
>gi|7509723|pir||T26774 hypothetical protein Y39G8C.b - Caenorhabditis elegans
Length = 1801
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 79/182 (43%), Positives = 99/182 (54%), Gaps = 32/182 (17%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+HP D EDE+ V IF I+ L+ ++RP+K+ +MA+DG
Sbjct: 28 EFDNLYLDMNGIIHNCSHPNDDDVTFRITEDEIFVNIFAYIENLYNLIRPQKVFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKE---TAEKIAEVARIRE----K 162
VAPRAKMNQ R+RRF +E +K AR K
Sbjct: 88 VAPRAKMNQ-------------------QRARRFMYVEELLLAGKKEIWSARTAHTQLAK 128
Query: 163 LLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSD 222
L +G I+P E + FDSNCITPGT FM L L +I + D W+G K+ILS
Sbjct: 129 ALENGEIMPSE----ARFDSNCITPGTYFMTRLHQKLDDWIKTKSATDSRWQGRKIILSG 184
Query: 223 AN 224
N
Sbjct: 185 HN 186
>gi|281361106|ref|NP_001162796.1| pacman, isoform B [Drosophila melanogaster]
gi|272506169|gb|ACZ95330.1| pacman, isoform B [Drosophila melanogaster]
Length = 1613
Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 99/177 (55%), Gaps = 33/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGI+H C+HP+D +E+++ IF +D+LF +++P++L ++++DG
Sbjct: 28 EFDNLYLDMNGIVHNCSHPDDNNIHFHLEEEQIFQEIFNYVDKLFYLIKPQRLFFLSVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ RSRRFR ++E ++ A+ A+
Sbjct: 88 VAPRAKMNQ-------------------QRSRRFRTAREAEQQEAKAAQ----------- 117
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
E + FDSNCITPGT FM L L ++ +++ DP W+ VILS P
Sbjct: 118 -RGELREHERFDSNCITPGTEFMVRLQEGLRAFLKTKISTDPLWQRCTVILSGQEAP 173
>gi|24643245|ref|NP_523408.2| pacman, isoform A [Drosophila melanogaster]
gi|7293586|gb|AAF48958.1| pacman, isoform A [Drosophila melanogaster]
gi|15291661|gb|AAK93099.1| LD22664p [Drosophila melanogaster]
Length = 1612
Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 99/177 (55%), Gaps = 33/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGI+H C+HP+D +E+++ IF +D+LF +++P++L ++++DG
Sbjct: 28 EFDNLYLDMNGIVHNCSHPDDNNIHFHLEEEQIFQEIFNYVDKLFYLIKPQRLFFLSVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ RSRRFR ++E ++ A+ A+
Sbjct: 88 VAPRAKMNQ-------------------QRSRRFRTAREAEQQEAKAAQ----------- 117
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
E + FDSNCITPGT FM L L ++ +++ DP W+ VILS P
Sbjct: 118 -RGELREHERFDSNCITPGTEFMVRLQEGLRAFLKTKISTDPLWQRCTVILSGQEAP 173
>gi|4914494|emb|CAB43711.1| pacman protein [Drosophila melanogaster]
Length = 1613
Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 99/177 (55%), Gaps = 33/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGI+H C+HP+D +E+++ IF +D+LF +++P++L ++++DG
Sbjct: 28 EFDNLYLDMNGIVHNCSHPDDNNIHFHLEEEQIFQEIFNYVDKLFYLIKPQRLFFLSVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ RSRRFR ++E ++ A+ A+
Sbjct: 88 VAPRAKMNQ-------------------QRSRRFRTAREAEQQEAKAAQ----------- 117
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
E + FDSNCITPGT FM L L ++ +++ DP W+ VILS P
Sbjct: 118 -RGELREHERFDSNCITPGTEFMVRLQEGLRAFLKTKISTDPLWQRCTVILSGQEAP 173
>gi|326327749|pdb|2Y35|A Chain A, Crystal Structure Of Xrn1-Substrate Complex
Length = 1140
Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 99/177 (55%), Gaps = 33/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGI+H C+HP+D +E+++ IF +D+LF +++P++L ++++DG
Sbjct: 28 EFDNLYLDMNGIVHNCSHPDDNNIHFHLEEEQIFQEIFNYVDKLFYLIKPQRLFFLSVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ RSRRFR ++E ++ A+ A+
Sbjct: 88 VAPRAKMNQ-------------------QRSRRFRTAREAEQQEAKAAQ----------- 117
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
E + FDSNCITPGT FM L L ++ +++ DP W+ VILS P
Sbjct: 118 -RGELREHERFDSNCITPGTEFMVRLQEGLRAFLKTKISTDPLWQRCTVILSGQEAP 173
>gi|67583943|ref|XP_665025.1| CG10354-PA [Cryptosporidium hominis TU502]
gi|54655348|gb|EAL34795.1| CG10354-PA [Cryptosporidium hominis]
Length = 171
Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 75/160 (46%), Positives = 92/160 (57%), Gaps = 23/160 (14%)
Query: 41 FDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPR 100
D ++PN NG EFD LYLDMNGIIHPC +P PKDE EM + + IDRL+ +V+PR
Sbjct: 34 LDLTEPNING-EFDCLYLDMNGIIHPCCNPSGGDKPKDEAEMFTRVCDYIDRLYAMVKPR 92
Query: 101 KLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIR 160
+L+YMAIDGVAPRAKMNQ RSRR++ + E +
Sbjct: 93 RLIYMAIDGVAPRAKMNQ-------------------QRSRRYKTALEMDYNRRAYEIAQ 133
Query: 161 EKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLH 200
E+ G P EK +DSN ITPGTPFM L+ CLH
Sbjct: 134 EEFYKIGYKCPEYVEK---WDSNVITPGTPFMERLTMCLH 170
>gi|347971872|ref|XP_313715.5| AGAP004430-PA [Anopheles gambiae str. PEST]
gi|333469066|gb|EAA09254.6| AGAP004430-PA [Anopheles gambiae str. PEST]
Length = 1705
Score = 129 bits (324), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 74/177 (41%), Positives = 95/177 (53%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMV--AIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+HP D E M+ IF ++ LF+++RP+++ ++A+DG
Sbjct: 28 EFDNLYLDMNGIIHNCSHPNDADVHFRISEEMIFEGIFHYVEYLFKLIRPQQVFFIAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R RRFR++ AE + EK A G
Sbjct: 88 VAPRAKMNQ-------------------QRGRRFRSA-------AEAQDLLEKAKAKGEE 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
+ E S FDSNCITPGT FM L L ++I ++ D WK VILS P
Sbjct: 122 ISSE----SPFDSNCITPGTSFMVRLQNALQHFIQVKIATDRLWKACTVILSGHETP 174
>gi|320169903|gb|EFW46802.1| 5'-3' exoribonuclease 2 [Capsaspora owczarzaki ATCC 30864]
Length = 1548
Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 76/188 (40%), Positives = 97/188 (51%), Gaps = 31/188 (16%)
Query: 46 PNPNGMEFDNLYLDMNGIIHPCTHPEDKP--APKDEDEMMVAIFECIDRLFRIVRPRKLL 103
P+ + FDNLYLD NGI H +H +D A E EMM A+F IDRL + RP+KL+
Sbjct: 23 PSNDAPLFDNLYLDFNGIAHNASHGKDDAGAAAISELEMMSAMFAAIDRLVEVARPQKLV 82
Query: 104 YMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKL 163
Y+AIDGVAPRAKMNQ R RR + ++ AE AR
Sbjct: 83 YIAIDGVAPRAKMNQ-------------------QRQRRLKTARA-----AEKARTEASA 118
Query: 164 LADGCILPPEKE-----KGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKV 218
+ D P +E + FD+NCITPGT FM + A L YYI ++ P W ++V
Sbjct: 119 IGDLTGAKPIEEIEAEARALPFDANCITPGTEFMDRMEAYLSYYIKRKITESPQWSSLQV 178
Query: 219 ILSDANVP 226
ILS P
Sbjct: 179 ILSGHRTP 186
>gi|401883118|gb|EJT47352.1| hypothetical protein A1Q1_03823 [Trichosporon asahii var. asahii
CBS 2479]
Length = 1499
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/145 (48%), Positives = 86/145 (59%), Gaps = 30/145 (20%)
Query: 82 MMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSR 141
M++AIF ID LF ++PRK+ +MAIDGVAPRAKMNQ RSR
Sbjct: 1 MILAIFAYIDFLFTKIKPRKVFFMAIDGVAPRAKMNQ-------------------QRSR 41
Query: 142 RFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHY 201
RFR +++ EK RE+ L G LP EK FDSNCITPGTPFMA LS L Y
Sbjct: 42 RFRTARDAREK-------REEALRKGETLPEEKA----FDSNCITPGTPFMARLSEHLKY 90
Query: 202 YIHDRLNNDPGWKGIKVILSDANVP 226
Y+ R++ D W+G+KVILS VP
Sbjct: 91 YVRKRISEDAEWRGVKVILSGHEVP 115
>gi|406702486|gb|EKD05502.1| hypothetical protein A1Q2_00263 [Trichosporon asahii var. asahii
CBS 8904]
Length = 1568
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/145 (48%), Positives = 86/145 (59%), Gaps = 30/145 (20%)
Query: 82 MMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSR 141
M++AIF ID LF ++PRK+ +MAIDGVAPRAKMNQ RSR
Sbjct: 1 MILAIFAYIDFLFTKIKPRKVFFMAIDGVAPRAKMNQ-------------------QRSR 41
Query: 142 RFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHY 201
RFR +++ EK RE+ L G LP EK FDSNCITPGTPFMA LS L Y
Sbjct: 42 RFRTARDAREK-------REEALRKGETLPEEKA----FDSNCITPGTPFMARLSEHLKY 90
Query: 202 YIHDRLNNDPGWKGIKVILSDANVP 226
Y+ R++ D W+G+KVILS VP
Sbjct: 91 YVRKRISEDAEWRGVKVILSGHEVP 115
>gi|342878482|gb|EGU79819.1| hypothetical protein FOXB_09678 [Fusarium oxysporum Fo5176]
Length = 1380
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/170 (43%), Positives = 98/170 (57%), Gaps = 33/170 (19%)
Query: 60 MNGIIHPCTHP---EDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKM 116
MNGIIH CTH ED E+EM + IF I+ LF ++P++L +MAIDGVAPRAKM
Sbjct: 1 MNGIIHNCTHKDAGEDVSFRLSEEEMFIRIFNYIEHLFGKIKPKQLFFMAIDGVAPRAKM 60
Query: 117 NQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEK 176
NQ RSRRFR + + AEK REK + +G +P E+
Sbjct: 61 NQ-------------------QRSRRFRTALD-AEKA------REKAIKEGVEIPKEEP- 93
Query: 177 GSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
FDSNCITPGT FMA LS L Y+++ +++ D W+G +++LS VP
Sbjct: 94 ---FDSNCITPGTEFMAKLSQQLRYFVNKKVSEDTDWQGCEIVLSGHEVP 140
>gi|322696208|gb|EFY88004.1| exonuclease [Metarhizium acridum CQMa 102]
Length = 1386
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/170 (42%), Positives = 98/170 (57%), Gaps = 33/170 (19%)
Query: 60 MNGIIHPCTHP---EDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKM 116
MNGIIH CTH ED E+EM + IF I+ LF ++P++L +MAIDGVAPRAKM
Sbjct: 1 MNGIIHNCTHKDAGEDVSFRLSEEEMFIRIFNYIEHLFGKIKPKQLFFMAIDGVAPRAKM 60
Query: 117 NQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEK 176
NQ R+RRFR + + AEK REK + +G +P E+
Sbjct: 61 NQ-------------------QRARRFRTALD-AEKA------REKAIKEGVEMPKEEP- 93
Query: 177 GSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
FDSNCITPGT FMA LS L Y+++ +++ D W+G +++LS VP
Sbjct: 94 ---FDSNCITPGTEFMAKLSQQLRYFVNKKVSEDADWQGCEIVLSGHEVP 140
>gi|407420481|gb|EKF38586.1| 5'-3' exonuclease XRNA, putative [Trypanosoma cruzi marinkellei]
Length = 1446
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/190 (39%), Positives = 103/190 (54%), Gaps = 37/190 (19%)
Query: 40 PFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKD---EDEMMVAIFECIDRLFRI 96
PF S P DNLYLDMNGIIH CTH D A + E MM A+F +++LF +
Sbjct: 20 PFRDSPP-----PVDNLYLDMNGIIHNCTHTNDVDATQKSPTEKAMMEAMFAYLEKLFNV 74
Query: 97 VRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEV 156
++PRK ++A+DGVAPRAKMNQ R RR+R+ ++
Sbjct: 75 IQPRKYFFLAVDGVAPRAKMNQ-------------------QRQRRYRSGY-------DL 108
Query: 157 ARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGI 216
R++ +A G +P EK+ FDSNCITPGT FM +S L Y+I ++ DP W+
Sbjct: 109 MVARQEAIAQGEEVPDEKDV---FDSNCITPGTNFMVRVSEQLQYFITMKIAMDPAWQNC 165
Query: 217 KVILSDANVP 226
+V+ S + P
Sbjct: 166 QVVYSGHDSP 175
>gi|222622867|gb|EEE56999.1| hypothetical protein OsJ_06746 [Oryza sativa Japonica Group]
Length = 391
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/201 (42%), Positives = 107/201 (53%), Gaps = 42/201 (20%)
Query: 40 PFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKP-------APKDEDEMMVAIFECIDR 92
P S+P + +DNLYLDMN IIH HP+D+ AP E+ ++F+ +DR
Sbjct: 20 PAKESRPADGIVVYDNLYLDMNQIIHYSFHPQDQMNAGTDVCAPTTVSEVFESMFDYLDR 79
Query: 93 LFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEK 152
LFRIVRPR+LLY+A+DGVAP AKMN RR R ++
Sbjct: 80 LFRIVRPRRLLYLAVDGVAPCAKMNG---------------------MRRGRPAE----- 113
Query: 153 IAEVARIREKLLADGCILPPEKEKGSH------FDSNCITPGTPFMACLSACLHYYIHDR 206
+ R R++ G IL +E+ D N ITPGT FM +S L YYI R
Sbjct: 114 --AIDRSRKRHPCFGSILQASEEEEMQKISEGVSDPNVITPGTEFMEKISQALTYYIRAR 171
Query: 207 LN-NDPGWKGIKVILSDANVP 226
LN +DPGWK I VILSDANVP
Sbjct: 172 LNSSDPGWKHIMVILSDANVP 192
>gi|72391638|ref|XP_846113.1| 5'-3' exonuclease XRNA [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62175631|gb|AAX69763.1| 5'-3' exonuclease XRNA, putative [Trypanosoma brucei]
gi|70802649|gb|AAZ12554.1| 5'-3' exonuclease XRNA, putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 1418
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 96/176 (54%), Gaps = 32/176 (18%)
Query: 54 DNLYLDMNGIIHPCTHPEDKPAPKD---EDEMMVAIFECIDRLFRIVRPRKLLYMAIDGV 110
DNLYLDMNGIIH CTHP D A E M+ A+F +++LF ++PRK ++A+DGV
Sbjct: 29 DNLYLDMNGIIHNCTHPNDADATHKAPTEKAMVEAMFSYLEKLFNAIQPRKCFFLAVDGV 88
Query: 111 APRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCIL 170
APRAKMNQ R RR+R+ E + RE+ L+ G L
Sbjct: 89 APRAKMNQ-------------------QRQRRYRSGYE-------MMVAREEALSRGEEL 122
Query: 171 PPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
P E+ FDSNCITPGT FM +S Y+I +++ DP W+ VI S + P
Sbjct: 123 P---EEADVFDSNCITPGTDFMVRISEHFQYFIMMKMSTDPAWQNCSVIYSGHDHP 175
>gi|261329673|emb|CBH12655.1| 5'-3' exonuclease XRNA, putative [Trypanosoma brucei gambiense
DAL972]
Length = 1418
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 96/176 (54%), Gaps = 32/176 (18%)
Query: 54 DNLYLDMNGIIHPCTHPEDKPAPKD---EDEMMVAIFECIDRLFRIVRPRKLLYMAIDGV 110
DNLYLDMNGIIH CTHP D A E M+ A+F +++LF ++PRK ++A+DGV
Sbjct: 29 DNLYLDMNGIIHNCTHPNDADATHKAPTEKAMVEAMFSYLEKLFNAIQPRKCFFLAVDGV 88
Query: 111 APRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCIL 170
APRAKMNQ R RR+R+ E + RE+ L+ G L
Sbjct: 89 APRAKMNQ-------------------QRQRRYRSGYE-------MMVAREEALSRGEEL 122
Query: 171 PPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
P E+ FDSNCITPGT FM +S Y+I +++ DP W+ VI S + P
Sbjct: 123 P---EEADVFDSNCITPGTDFMVRISEHFQYFIMMKMSTDPAWQNCSVIYSGHDHP 175
>gi|71415930|ref|XP_810014.1| 5'-3' exonuclease XRNA [Trypanosoma cruzi strain CL Brener]
gi|70874484|gb|EAN88163.1| 5'-3' exonuclease XRNA, putative [Trypanosoma cruzi]
Length = 266
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 98/176 (55%), Gaps = 32/176 (18%)
Query: 54 DNLYLDMNGIIHPCTHPEDKPAPKD---EDEMMVAIFECIDRLFRIVRPRKLLYMAIDGV 110
DNLYLDMNGIIH CTH D A + E MM A+F +++LF +++PRK ++A+DGV
Sbjct: 29 DNLYLDMNGIIHNCTHTNDVDATQKSPTEKAMMEAMFAYLEKLFNVIQPRKYFFLAVDGV 88
Query: 111 APRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCIL 170
APRAKMNQ R RR+R+ E+ R++ +A G +
Sbjct: 89 APRAKMNQ-------------------QRQRRYRSG-------YELMVARQEAIAQGEEV 122
Query: 171 PPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
P EK+ FDSNCITPGT FM +S Y+I ++ DP W+ +V+ S + P
Sbjct: 123 PDEKDV---FDSNCITPGTNFMVRVSEQFQYFITMKIATDPAWQNCQVVYSGHDNP 175
>gi|407853365|gb|EKG06397.1| 5'-3' exonuclease XRNA, putative [Trypanosoma cruzi]
Length = 1646
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/190 (39%), Positives = 102/190 (53%), Gaps = 37/190 (19%)
Query: 40 PFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKD---EDEMMVAIFECIDRLFRI 96
PF S P DNLYLDMNGIIH CTH D A + E MM A+F +++LF +
Sbjct: 225 PFRDSPP-----PVDNLYLDMNGIIHNCTHTNDVDATQKSPTEKAMMEAMFAYLEKLFNV 279
Query: 97 VRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEV 156
++PRK ++A+DGVAPRAKMNQ R RR+R+ E+
Sbjct: 280 IQPRKYFFLAVDGVAPRAKMNQ-------------------QRQRRYRSGY-------EL 313
Query: 157 ARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGI 216
R++ +A G +P EK+ FDSNCITPGT FM +S Y+I ++ DP W+
Sbjct: 314 MVARQEAIAQGEEVPDEKDV---FDSNCITPGTNFMVRVSEQFQYFITMKIATDPAWQNC 370
Query: 217 KVILSDANVP 226
+V+ S + P
Sbjct: 371 QVVYSGHDNP 380
>gi|71416427|ref|XP_810246.1| 5'-3' exonuclease XRNA [Trypanosoma cruzi strain CL Brener]
gi|70874749|gb|EAN88395.1| 5'-3' exonuclease XRNA, putative [Trypanosoma cruzi]
Length = 230
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/190 (39%), Positives = 102/190 (53%), Gaps = 37/190 (19%)
Query: 40 PFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKD---EDEMMVAIFECIDRLFRI 96
PF S P DNLYLDMNGIIH CTH D A + E MM A+F +++LF +
Sbjct: 20 PFRDSPP-----PVDNLYLDMNGIIHNCTHTNDVDATQKSPTEKAMMEAMFAYLEKLFNV 74
Query: 97 VRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEV 156
++PRK ++A+DGVAPRAKMNQ R RR+R+ E+
Sbjct: 75 IQPRKYFFLAVDGVAPRAKMNQ-------------------QRQRRYRSG-------YEL 108
Query: 157 ARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGI 216
R++ +A G +P EK+ FDSNCITPGT FM +S Y+I ++ DP W+
Sbjct: 109 MVARQEAIAQGEEVPDEKDV---FDSNCITPGTNFMVRVSEQFQYFITMKIATDPAWQNC 165
Query: 217 KVILSDANVP 226
+V+ S + P
Sbjct: 166 QVVYSGHDNP 175
>gi|45187827|ref|NP_984050.1| ADL046Cp [Ashbya gossypii ATCC 10895]
gi|44982611|gb|AAS51874.1| ADL046Cp [Ashbya gossypii ATCC 10895]
gi|374107264|gb|AEY96172.1| FADL046Cp [Ashbya gossypii FDAG1]
Length = 1474
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 73/177 (41%), Positives = 99/177 (55%), Gaps = 32/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAPK--DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
+FDNLYLDMN I+H TH + K E+E+ IF ID LF ++P++ LYMAIDG
Sbjct: 28 QFDNLYLDMNSILHTATHGNEDDIKKRLSEEEVFARIFVYIDHLFHTIKPQQTLYMAIDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R+RRFR++ + + R RE+ G
Sbjct: 88 VAPRAKMNQ-------------------QRARRFRSAMDAE---TSLNRARER----GDE 121
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
+P +G FDSN ITPGT FM L+ L Y+IH+++++D W+ +ILS VP
Sbjct: 122 IP----EGEPFDSNSITPGTEFMHKLTTNLKYFIHEKVSSDSLWQNKNIILSGHEVP 174
>gi|164424738|ref|XP_960925.2| hypothetical protein NCU06678 [Neurospora crassa OR74A]
gi|157070639|gb|EAA31689.2| hypothetical protein NCU06678 [Neurospora crassa OR74A]
Length = 1415
Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 72/169 (42%), Positives = 96/169 (56%), Gaps = 32/169 (18%)
Query: 60 MNGIIHPCTHPE--DKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMN 117
MNGIIH CTH + D E+EM +AIF I+ LF ++P+KL +MAIDGVAPRAKMN
Sbjct: 1 MNGIIHNCTHKDTSDVQFRMTEEEMFIAIFNYIEHLFGKIKPKKLFFMAIDGVAPRAKMN 60
Query: 118 QPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKG 177
Q R+RRFR + + + R+K + +G LP E+
Sbjct: 61 Q-------------------QRARRFRTALDN-------EKARDKAIREGKELPKEEP-- 92
Query: 178 SHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
FDSNCITPGT FMA LS L Y+IH +++ D W+ +++LS VP
Sbjct: 93 --FDSNCITPGTEFMAKLSQQLRYFIHKKVSEDRDWQQPEIVLSGHEVP 139
>gi|367024791|ref|XP_003661680.1| hypothetical protein MYCTH_92876 [Myceliophthora thermophila ATCC
42464]
gi|347008948|gb|AEO56435.1| hypothetical protein MYCTH_92876 [Myceliophthora thermophila ATCC
42464]
Length = 1055
Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 74/169 (43%), Positives = 98/169 (57%), Gaps = 32/169 (18%)
Query: 60 MNGIIHPCTH--PEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMN 117
MNGIIH CTH +D E+EM +AIF I+ LF ++P+KL +MA+DGVAPRAKMN
Sbjct: 1 MNGIIHNCTHKDSDDVHFRLTEEEMFIAIFNYIEHLFSKIKPKKLFFMAVDGVAPRAKMN 60
Query: 118 QPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKG 177
Q R+RRFR + + AEK REK + +G LP E+
Sbjct: 61 Q-------------------QRARRFRTALD-AEK------AREKAIREGKELPKEEP-- 92
Query: 178 SHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
FDSNCITPGT FMA LS L Y+I+ +++ D W+ +++LS VP
Sbjct: 93 --FDSNCITPGTEFMAKLSQQLKYFINKKVSEDRAWQQPEIVLSGHEVP 139
>gi|149239226|ref|XP_001525489.1| 5'-3' exoribonuclease 1 [Lodderomyces elongisporus NRRL YB-4239]
gi|146450982|gb|EDK45238.1| 5'-3' exoribonuclease 1 [Lodderomyces elongisporus NRRL YB-4239]
Length = 1512
Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 91/168 (54%), Gaps = 31/168 (18%)
Query: 60 MNGIIHPCTHPEDKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQ 118
MN I+H CTH D + +D+M AIF ID LF I++P++ YMAIDGVAPRAKMNQ
Sbjct: 1 MNSILHTCTHSNDGSLSRLSDDQMYAAIFNYIDHLFSIIKPKQTFYMAIDGVAPRAKMNQ 60
Query: 119 PLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGS 178
R+RRFR + E E + +K + +G +P E
Sbjct: 61 -------------------QRARRFRTAYEAEENL-------KKAIENGEDIPKE----D 90
Query: 179 HFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
FDSN ITPGT FMA L+ L Y+IH ++ D W +++ILS VP
Sbjct: 91 PFDSNSITPGTEFMAKLTDNLKYFIHKKITEDSRWANVEIILSGHEVP 138
>gi|68467259|ref|XP_722291.1| hypothetical protein CaO19.12434 [Candida albicans SC5314]
gi|46444252|gb|EAL03528.1| hypothetical protein CaO19.12434 [Candida albicans SC5314]
Length = 1469
Score = 126 bits (316), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 71/168 (42%), Positives = 93/168 (55%), Gaps = 31/168 (18%)
Query: 60 MNGIIHPCTHPEDKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQ 118
MN I+H CTH D + +D+M AIF I+ LF+I++P+K YMAIDGVAPRAKMNQ
Sbjct: 1 MNSILHTCTHSNDNTITRLSDDQMYAAIFNYIEHLFQIIKPQKTFYMAIDGVAPRAKMNQ 60
Query: 119 PLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGS 178
R+RRFR + E AE+ +K + +G +P E
Sbjct: 61 -------------------QRARRFRTAYE-----AEIN--LKKAIENGEEIPKE----D 90
Query: 179 HFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
FDSN ITPGT FMA L+ L Y+IH ++ D W I++ILS VP
Sbjct: 91 PFDSNSITPGTEFMANLTNNLKYFIHKKITEDSSWANIEIILSGHEVP 138
>gi|387592987|gb|EIJ88011.1| hypothetical protein NEQG_01455 [Nematocida parisii ERTm3]
Length = 613
Score = 125 bits (315), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 77/179 (43%), Positives = 94/179 (52%), Gaps = 43/179 (24%)
Query: 49 NGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAID 108
+G E DNLYLD+NGIIHPC HP ++ P E+EM IF+ +D L IVRP+ LLY+A+D
Sbjct: 22 SGQEVDNLYLDLNGIIHPCCHPRNREPPGSEEEMFREIFKTVDHLVSIVRPKHLLYIAVD 81
Query: 109 GVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGC 168
GVAPRAKMNQ R RRFR K ++DG
Sbjct: 82 GVAPRAKMNQ-------------------QRERRFRP----------------KDVSDGH 106
Query: 169 ILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND-PGWKGIKVILSDANVP 226
+ E G FD N ITPGTPFM L + YI R + GWK + VI S +VP
Sbjct: 107 V-----EGG--FDPNTITPGTPFMYRLHCAIIRYIEQRQSAGINGWKQLAVIYSGCDVP 158
>gi|345487550|ref|XP_001601647.2| PREDICTED: 5'-3' exoribonuclease 2 homolog [Nasonia vitripennis]
Length = 828
Score = 125 bits (315), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 58/71 (81%), Positives = 60/71 (84%)
Query: 156 VARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKG 215
+ARIR +L G LPPEK K HFDSNCITPGTPFMA LSACLHYYIHDRLNNDPGWK
Sbjct: 1 MARIRSELALKGAFLPPEKPKEDHFDSNCITPGTPFMARLSACLHYYIHDRLNNDPGWKN 60
Query: 216 IKVILSDANVP 226
IKVILSDANVP
Sbjct: 61 IKVILSDANVP 71
>gi|387596301|gb|EIJ93923.1| hypothetical protein NEPG_01495 [Nematocida parisii ERTm1]
Length = 613
Score = 125 bits (315), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 77/179 (43%), Positives = 94/179 (52%), Gaps = 43/179 (24%)
Query: 49 NGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAID 108
+G E DNLYLD+NGIIHPC HP ++ P E+EM IF+ +D L IVRP+ LLY+A+D
Sbjct: 22 SGQEVDNLYLDLNGIIHPCCHPRNREPPGSEEEMFREIFKTVDHLVSIVRPKHLLYIAVD 81
Query: 109 GVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGC 168
GVAPRAKMNQ R RRFR K ++DG
Sbjct: 82 GVAPRAKMNQ-------------------QRERRFRP----------------KDVSDGH 106
Query: 169 ILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND-PGWKGIKVILSDANVP 226
+ E G FD N ITPGTPFM L + YI R + GWK + VI S +VP
Sbjct: 107 V-----EGG--FDPNTITPGTPFMYRLHCAIIRYIEQRQSAGINGWKQLAVIYSGCDVP 158
>gi|241950323|ref|XP_002417884.1| 5'-3' exoribonuclease, DNA strand transfer protein beta, putative
[Candida dubliniensis CD36]
gi|223641222|emb|CAX45602.1| 5'-3' exoribonuclease, DNA strand transfer protein beta, putative
[Candida dubliniensis CD36]
Length = 1487
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/168 (41%), Positives = 93/168 (55%), Gaps = 31/168 (18%)
Query: 60 MNGIIHPCTHPEDKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQ 118
MN I+H CTH D + +D+M AIF I+ LF+I++P+K YMAIDGVAPRAKMNQ
Sbjct: 1 MNSILHTCTHSNDNTITRLSDDQMYAAIFNYIEHLFQIIKPQKTFYMAIDGVAPRAKMNQ 60
Query: 119 PLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGS 178
R+RRFR + E AE+ +K + +G +P E
Sbjct: 61 -------------------QRARRFRTAYE-----AEIN--LKKAIENGEEIPKE----D 90
Query: 179 HFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
FDSN ITPGT FMA L+ L Y+IH ++ D W I+++LS VP
Sbjct: 91 PFDSNSITPGTEFMAKLTNNLKYFIHKKITEDSSWANIEIVLSGHEVP 138
>gi|340054861|emb|CCC49169.1| putative 5'-3' exonuclease XRNA [Trypanosoma vivax Y486]
Length = 1411
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/191 (39%), Positives = 101/191 (52%), Gaps = 37/191 (19%)
Query: 39 IPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPED---KPAPKDEDEMMVAIFECIDRLFR 95
IPF P + DNLYLDMNGIIH C+HP D K E EM ++F +++LF
Sbjct: 19 IPFRDFPP-----QIDNLYLDMNGIIHNCSHPNDVDAKHKAPTELEMAKSMFVYLEKLFN 73
Query: 96 IVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAE 155
++PRK ++A+DGVAPRAKMNQ R RR+R+ E
Sbjct: 74 AIQPRKCFFLAVDGVAPRAKMNQ-------------------QRQRRYRSGY-------E 107
Query: 156 VARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKG 215
+ RE+ LA G +P E + FDSNCITPGT FM +S Y+I +++ DP W+
Sbjct: 108 LMIAREEALARGEEIPEEHDV---FDSNCITPGTDFMVRISEHFQYFITMKVSTDPAWQK 164
Query: 216 IKVILSDANVP 226
+I S + P
Sbjct: 165 CNIIYSGHDHP 175
>gi|325185573|emb|CCA20056.1| 5'3' exoribonuclease 1 putative [Albugo laibachii Nc14]
Length = 1515
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/179 (43%), Positives = 99/179 (55%), Gaps = 31/179 (17%)
Query: 52 EFDNLYLDMNGIIHPCTH---PEDKPAPKDEDEMMVAIFECIDRLFR-IVRPRKLLYMAI 107
EFD YLDMNGI+H CTH D +P +E AI +DRL IV+PRKL+Y+AI
Sbjct: 29 EFDCFYLDMNGILHVCTHNNNSSDDASPATFEEQFQAIVRYLDRLVTCIVKPRKLVYLAI 88
Query: 108 DGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADG 167
DGVAPRAK+NQ RSRRF A EK+ E+A EK +G
Sbjct: 89 DGVAPRAKLNQ-------------------QRSRRFSAGLVRQEKVKELALEMEK---NG 126
Query: 168 CILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
EK+ FDS+CITPGT F+ +S L Y+I ++ NDP W ++V S + VP
Sbjct: 127 TTC--EKDL---FDSSCITPGTEFLERISEQLVYFIRHKIKNDPLWSRLEVYFSGSEVP 180
>gi|342182115|emb|CCC91594.1| putative exoribonuclease 1 [Trypanosoma congolense IL3000]
Length = 1296
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 99/176 (56%), Gaps = 33/176 (18%)
Query: 54 DNLYLDMNGIIHPCTHPEDKPAPKD---EDEMMVAIFECIDRLFRIVRPRKLLYMAIDGV 110
DNLYLD+NGIIH C+HP D + E EM+ A+F +++LF ++PRK ++A+DGV
Sbjct: 29 DNLYLDVNGIIHNCSHPNDANSSAKVLTEKEMIEAMFVYLEKLFHAIQPRKCFFLAVDGV 88
Query: 111 APRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCIL 170
APRAKMNQ R RR+R+ E+ RE+ A+G L
Sbjct: 89 APRAKMNQ-------------------QRQRRYRSG-------YEMMVARERAAAEGMEL 122
Query: 171 PPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
E + FDSNCITPGT FM +S L Y+I ++++DP W+ KV+ S + P
Sbjct: 123 LEE----NVFDSNCITPGTEFMVNVSEHLKYFIMMKVSSDPAWQSCKVVYSGHDHP 174
>gi|171694057|ref|XP_001911953.1| hypothetical protein [Podospora anserina S mat+]
gi|170946977|emb|CAP73781.1| unnamed protein product [Podospora anserina S mat+]
Length = 1419
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/178 (40%), Positives = 98/178 (55%), Gaps = 33/178 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPED---KPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAID 108
EFD LYLDMNGIIH CTH + + A E++M +AIF I+ LF ++P+ L +MAID
Sbjct: 26 EFDCLYLDMNGIIHNCTHKDSDDVQQARISEEQMFIAIFNYIEHLFGKIKPKTLFFMAID 85
Query: 109 GVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGC 168
GVAPRAKMNQ R+RRFR + + R R+K + +G
Sbjct: 86 GVAPRAKMNQ-------------------QRARRFRTA-------LDAERARDKAIQEGK 119
Query: 169 ILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP E FDSNCITPG + L Y+I+ +++ D W+G +++LS VP
Sbjct: 120 ELPKEPP----FDSNCITPGMLLPPDVWFSLKYFINKKVSEDKDWQGPEIVLSGHEVP 173
>gi|190345127|gb|EDK36952.2| hypothetical protein PGUG_01050 [Meyerozyma guilliermondii ATCC
6260]
Length = 1378
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 90/168 (53%), Gaps = 31/168 (18%)
Query: 60 MNGIIHPCTHPEDKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQ 118
MN I+H CTH D + +D+M AIF I+ LF I++P+ + YMAIDGVAPRAKMNQ
Sbjct: 1 MNSILHTCTHSNDDTLSRMTDDQMYAAIFSYIEHLFEIIKPKGVFYMAIDGVAPRAKMNQ 60
Query: 119 PLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGS 178
R+RRFR + E E + +K ++ G +P K
Sbjct: 61 -------------------QRARRFRTAYEAEENL-------KKAISQGLEIP----KDD 90
Query: 179 HFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
FDSN ITPGT FMA L+ L Y+IH +++ D W +ILS VP
Sbjct: 91 PFDSNAITPGTEFMAKLTENLKYFIHKKISTDSRWAETVIILSGHEVP 138
>gi|301094845|ref|XP_002896526.1| 5'-3' exoribonuclease 1, putative [Phytophthora infestans T30-4]
gi|262109022|gb|EEY67074.1| 5'-3' exoribonuclease 1, putative [Phytophthora infestans T30-4]
Length = 1480
Score = 122 bits (307), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 72/181 (39%), Positives = 99/181 (54%), Gaps = 28/181 (15%)
Query: 52 EFDNLYLDMNGIIHPCTH---PEDKPAPKDEDEMMVAIFECIDRLF-RIVRPRKLLYMAI 107
EFD YLDMNGI+H CTH +D + + IF +DRL I++P+KL+Y+AI
Sbjct: 29 EFDAFYLDMNGIVHNCTHSDAADDALNSLSLEGQLHGIFTYLDRLITHIIKPKKLVYIAI 88
Query: 108 DGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLL--A 165
DGVAPRAK+NQ RSRRFRA + + + + ++ KL
Sbjct: 89 DGVAPRAKLNQ-------------------QRSRRFRAGLDRQQAMDKERHMQIKLQDEK 129
Query: 166 DGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANV 225
DG K S FDSNCITPGT F++ LS L Y++ ++ +DP W ++V S + V
Sbjct: 130 DGH---KAKSVASKFDSNCITPGTEFLSKLSQHLVYFVRQKMKSDPLWARLEVFFSGSEV 186
Query: 226 P 226
P
Sbjct: 187 P 187
>gi|66475504|ref|XP_627568.1| Kem1p-like 5'-3' exonuclease [Cryptosporidium parvum Iowa II]
gi|46229016|gb|EAK89865.1| Kem1p-like 5'-3' exonuclease [Cryptosporidium parvum Iowa II]
Length = 1588
Score = 122 bits (307), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 71/182 (39%), Positives = 101/182 (55%), Gaps = 38/182 (20%)
Query: 53 FDNLYLDMNGIIHPCTHPEDKPAP--------KDEDEMMVAIFECIDRLFRIVRPRKLLY 104
FDNLYLD+NGI H + + P K E+ AIF I++L I +PRKLLY
Sbjct: 29 FDNLYLDVNGIAHNSVNSSEMRTPSNGINLSEKGSPEIWAAIFRYINKLVYIAKPRKLLY 88
Query: 105 MAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLL 164
+A+DGVAPRAKMNQ RSRRFR++++ + +K+
Sbjct: 89 IAVDGVAPRAKMNQ-------------------QRSRRFRSARD--------SEFLKKME 121
Query: 165 ADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDAN 224
+ I + + + FDSNCITPGT FM L L ++I+ +++ DP WK ++V+LS A+
Sbjct: 122 KNNSI---DTTQNNVFDSNCITPGTTFMHELRRQLEFFIYHQIHTDPLWKHLEVVLSGAD 178
Query: 225 VP 226
VP
Sbjct: 179 VP 180
>gi|378755557|gb|EHY65583.1| hypothetical protein NERG_01190 [Nematocida sp. 1 ERTm2]
Length = 613
Score = 122 bits (307), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 76/174 (43%), Positives = 88/174 (50%), Gaps = 43/174 (24%)
Query: 54 DNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPR 113
DNLYLD+NGIIHPC HP K AP E EM IF +D L IVRP++L+Y+A+DGVAPR
Sbjct: 27 DNLYLDLNGIIHPCCHPRGKDAPGSEKEMFQEIFRMVDHLVAIVRPKQLMYIAVDGVAPR 86
Query: 114 AKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCILPPE 173
AKMNQ R RRFR T DG +
Sbjct: 87 AKMNQ-------------------QRERRFRPKDPT----------------DGHV---- 107
Query: 174 KEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDP-GWKGIKVILSDANVP 226
E G FD N ITPGTPFM L + YI R + GWK + VI S +VP
Sbjct: 108 -EGG--FDPNTITPGTPFMYRLHTAITRYIEQRQSAGVNGWKQLAVIYSGCDVP 158
>gi|32398787|emb|CAD98497.1| exonuclease ii, possible [Cryptosporidium parvum]
Length = 1572
Score = 122 bits (307), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 71/182 (39%), Positives = 101/182 (55%), Gaps = 38/182 (20%)
Query: 53 FDNLYLDMNGIIHPCTHPEDKPAP--------KDEDEMMVAIFECIDRLFRIVRPRKLLY 104
FDNLYLD+NGI H + + P K E+ AIF I++L I +PRKLLY
Sbjct: 29 FDNLYLDVNGIAHNSVNSSEMRTPSNGINLSEKGSPEIWAAIFRYINKLVYIAKPRKLLY 88
Query: 105 MAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLL 164
+A+DGVAPRAKMNQ RSRRFR++++ + +K+
Sbjct: 89 IAVDGVAPRAKMNQ-------------------QRSRRFRSARD--------SEFLKKME 121
Query: 165 ADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDAN 224
+ I + + + FDSNCITPGT FM L L ++I+ +++ DP WK ++V+LS A+
Sbjct: 122 KNNSI---DTTQNNVFDSNCITPGTTFMHELRRQLEFFIYHQIHTDPLWKHLEVVLSGAD 178
Query: 225 VP 226
VP
Sbjct: 179 VP 180
>gi|146423491|ref|XP_001487673.1| hypothetical protein PGUG_01050 [Meyerozyma guilliermondii ATCC
6260]
Length = 1378
Score = 122 bits (307), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 89/168 (52%), Gaps = 31/168 (18%)
Query: 60 MNGIIHPCTHPEDKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQ 118
MN I+H CTH D + +D+M AIF I+ LF I++P+ + YMAIDGVAPRAKMNQ
Sbjct: 1 MNSILHTCTHSNDDTLSRMTDDQMYAAIFSYIEHLFEIIKPKGVFYMAIDGVAPRAKMNQ 60
Query: 119 PLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGS 178
R+RRFR + E E + +K + G +P K
Sbjct: 61 -------------------QRARRFRTAYEAEENL-------KKAILQGLEIP----KDD 90
Query: 179 HFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
FDSN ITPGT FMA L+ L Y+IH +++ D W +ILS VP
Sbjct: 91 PFDSNAITPGTEFMAKLTENLKYFIHKKISTDSRWAETVIILSGHEVP 138
>gi|156085645|ref|XP_001610232.1| 5'-3' exoribonuclease (XRN2) [Babesia bovis T2Bo]
gi|154797484|gb|EDO06664.1| 5'-3' exoribonuclease (XRN2), putative [Babesia bovis]
Length = 1388
Score = 122 bits (307), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 104/184 (56%), Gaps = 29/184 (15%)
Query: 48 PNGMEFDNLYLDMNGIIHPCTHP--EDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYM 105
P+G FDNLYLD+NGIIH C+H E + E+++ V IF+ I+ L +IVRPRKLLY+
Sbjct: 51 PDG--FDNLYLDVNGIIHNCSHSIEELSQGLRCEEDIFVLIFQYINNLVKIVRPRKLLYL 108
Query: 106 AIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLA 165
AIDGVAPRAK+ Q R RRFR+++++ + I+E
Sbjct: 109 AIDGVAPRAKIMQ-------------------QRDRRFRSARDSNKNEVVFQTIQEN--- 146
Query: 166 DGCILPPEKEKGS---HFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSD 222
+G P G FD ITPGTPFM LS L ++ H ++ + WK +K+++S
Sbjct: 147 NGIEKEPSDGDGDVNFKFDPIQITPGTPFMERLSVRLRFFAHMMIHENKAWKNLKIVVSG 206
Query: 223 ANVP 226
++VP
Sbjct: 207 SDVP 210
>gi|170119902|ref|XP_001891045.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164633808|gb|EDQ98306.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 345
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/193 (39%), Positives = 101/193 (52%), Gaps = 33/193 (17%)
Query: 37 QKIPFDSSKPNPNGM-EFDNLYLDMNGIIHPCT--HPEDKPAPKDEDEMMVAIFECIDRL 93
++ P S N + EFDNLYLD NGIIH C+ + ED E+++ IF +D L
Sbjct: 3 ERYPLTSELIQENKIPEFDNLYLDFNGIIHNCSRLNDEDTHFRLTEEQIFTLIFTYVDHL 62
Query: 94 FRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKI 153
F ++ +KL ++A+DGVAPRAKMNQ RSRRFR +KE
Sbjct: 63 FGKIKLKKLFFVAVDGVAPRAKMNQ-------------------QRSRRFRTAKE----- 98
Query: 154 AEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGW 213
A+V +REK G LP EK FDSNCI P L Y+IH +++ D W
Sbjct: 99 AKV--VREKAELKGEKLPMEKA----FDSNCIAPVNTIYGTFIDQLRYFIHKKISEDSNW 152
Query: 214 KGIKVILSDANVP 226
+ +KV+LS VP
Sbjct: 153 REVKVVLSGREVP 165
>gi|330837844|ref|XP_003292059.1| hypothetical protein DICPUDRAFT_24625 [Dictyostelium purpureum]
gi|325077732|gb|EGC31426.1| hypothetical protein DICPUDRAFT_24625 [Dictyostelium purpureum]
Length = 126
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/119 (51%), Positives = 80/119 (67%), Gaps = 20/119 (16%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 90
P+E +G + D ++ NPNG E+DNLYLDMNGIIHPC HPE P P+ D+M+ +I+E +
Sbjct: 24 PREGDGSRSKVDFTEMNPNG-EYDNLYLDMNGIIHPCAHPEKGPKPQSVDDMIQSIYEYL 82
Query: 91 DRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKET 149
D LF I+RPRKL+YMA+DGVAPRAKMNQ R+RRFRA+ ++
Sbjct: 83 DLLFAIIRPRKLIYMAVDGVAPRAKMNQ-------------------QRTRRFRAALDS 122
>gi|339237353|ref|XP_003380231.1| 5'-3' exoribonuclease 1 [Trichinella spiralis]
gi|316976968|gb|EFV60153.1| 5'-3' exoribonuclease 1 [Trichinella spiralis]
Length = 614
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/174 (41%), Positives = 100/174 (57%), Gaps = 40/174 (22%)
Query: 53 FDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAP 112
+DNLYLD NGIIH C+HP +P A F C + LF++++PRK+L++A+DGVAP
Sbjct: 29 YDNLYLDFNGIIHNCSHPN---SPD-------ATFRCTEGLFQLIKPRKVLFIAVDGVAP 78
Query: 113 RAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCILPP 172
RAKMNQ RSRRF ++KE AE +R+ K + +G ++P
Sbjct: 79 RAKMNQ-------------------QRSRRFMSAKE-----AEDSRL--KAIRNGEVIP- 111
Query: 173 EKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
FDSNCITPGT FM L L Y+I+ +L++DP W+ + V S + P
Sbjct: 112 ---DSDPFDSNCITPGTEFMERLHIHLKYFINLKLSSDPLWQNVDVYYSGHDCP 162
>gi|412993039|emb|CCO16572.1| 5'-3' exoribonuclease [Bathycoccus prasinos]
Length = 1513
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/168 (44%), Positives = 93/168 (55%), Gaps = 32/168 (19%)
Query: 60 MNGIIHPCTHPE--DKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMN 117
MNG+IH C+H D E+EMM +F +D ++R+VRP+KLLYMAIDGVAPRAKMN
Sbjct: 1 MNGVIHNCSHGAGTDTNTRMTEEEMMAKVFAYLDHIYRMVRPKKLLYMAIDGVAPRAKMN 60
Query: 118 QPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKG 177
Q RSRRFR++KE E AE E PE + G
Sbjct: 61 Q-------------------QRSRRFRSAKEAEEAKAEALAKGE----------PEAQ-G 90
Query: 178 SHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANV 225
FDSNCITPGT FMA L+ L +Y+ + D W+ +KVILS V
Sbjct: 91 EPFDSNCITPGTEFMARLTEHLKFYVRKKQTEDVAWRNVKVILSGHEV 138
>gi|326498799|dbj|BAK02385.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 895
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/174 (39%), Positives = 95/174 (54%), Gaps = 27/174 (15%)
Query: 53 FDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAP 112
+DNLYLDMN IIH C + ++ + F+ +DRLFR+V+PR+LLY+A+DGVAP
Sbjct: 66 YDNLYLDMNEIIHKCFG-------RKNGQVYLRFFDHMDRLFRLVKPRRLLYLAVDGVAP 118
Query: 113 RAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCILPP 172
AK N+ +R F+++K+ + AE + E G + P
Sbjct: 119 MAKTNK-------------------LRQGYFKSTKQGTDAEAEAVLLTEIFRVQGKEVLP 159
Query: 173 EKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
++ D PGT FM +S L ++I +RLN DP WK IKVILSDANVP
Sbjct: 160 -RDTYEFEDRTVKMPGTEFMETISVVLEWFIRERLNTDPEWKDIKVILSDANVP 212
>gi|195059493|ref|XP_001995648.1| GH17871 [Drosophila grimshawi]
gi|193896434|gb|EDV95300.1| GH17871 [Drosophila grimshawi]
Length = 1754
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/177 (38%), Positives = 96/177 (54%), Gaps = 33/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNL+LD+NGI+H C+HP+D +E ++ I+ ID LF +++P+KL ++++DG
Sbjct: 28 EFDNLFLDVNGIVHNCSHPDDGNIHFHLEETQIFQDIYNYIDTLFYLIKPQKLFFVSVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ RSRRFR ++E + I K L G
Sbjct: 88 VAPRAKMNQ-------------------QRSRRFRTAREAEQ-------IDAKALQRG-- 119
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
EK FDSNCITPGT FM+ L L ++ +++ D W+ VILS P
Sbjct: 120 ---EKRMHERFDSNCITPGTGFMSRLQKGLRCFLRTKVSTDTLWQKCCVILSGVETP 173
>gi|238613508|ref|XP_002398460.1| hypothetical protein MPER_00943 [Moniliophthora perniciosa FA553]
gi|215475037|gb|EEB99390.1| hypothetical protein MPER_00943 [Moniliophthora perniciosa FA553]
Length = 98
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 54/78 (69%), Positives = 66/78 (84%)
Query: 39 IPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVR 98
IP + + PNPNG EFD LYLDMNGI+HPCTHPE KPAP+ E++MMV +F+ +R+ +VR
Sbjct: 21 IPTNMADPNPNGTEFDCLYLDMNGIVHPCTHPEGKPAPETEEDMMVEVFKYTERVVNMVR 80
Query: 99 PRKLLYMAIDGVAPRAKM 116
PRKLL+MAIDGVAPRAKM
Sbjct: 81 PRKLLFMAIDGVAPRAKM 98
>gi|84995660|ref|XP_952552.1| 5'-3' exoribonuclease 2 [Theileria annulata strain Ankara]
gi|65302713|emb|CAI74820.1| 5'-3' exoribonuclease 2, putative [Theileria annulata]
Length = 1467
Score = 120 bits (301), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 103/181 (56%), Gaps = 23/181 (12%)
Query: 48 PNGMEFDNLYLDMNGIIHPCTHPEDKPAPKD--EDEMMVAIFECIDRLFRIVRPRKLLYM 105
P+G FDNLYLD+NGI+H C+H ED++ V+IF+CI + IVRP+KLLY+
Sbjct: 55 PDG--FDNLYLDVNGIVHNCSHSVVDLCQNITCEDDIFVSIFQCIINIVNIVRPKKLLYL 112
Query: 106 AIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLA 165
A+DGVAPRAK+ Q R RRFRA+ E+ ++ + +++
Sbjct: 113 AVDGVAPRAKIIQ-------------------QRERRFRAAMESTQQQIILDSLKDMENG 153
Query: 166 DGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANV 225
+ EKE+ FD ITPGT FM L++ L ++ +N + W+ +K+++S ++V
Sbjct: 154 EESADLNEKEEEFKFDPIQITPGTAFMERLTSRLQFFALKMINENQQWRNLKIVVSGSDV 213
Query: 226 P 226
P
Sbjct: 214 P 214
>gi|209878396|ref|XP_002140639.1| XRN 5'-3' exonuclease domain-containing protein [Cryptosporidium
muris RN66]
gi|209556245|gb|EEA06290.1| XRN 5'-3' exonuclease domain-containing protein [Cryptosporidium
muris RN66]
Length = 1610
Score = 120 bits (301), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 99/182 (54%), Gaps = 38/182 (20%)
Query: 53 FDNLYLDMNGIIHPCTHPEDKPAPKD--------EDEMMVAIFECIDRLFRIVRPRKLLY 104
FDNLYLD+NGI H + + E+ IF+ I RL V+P+K++Y
Sbjct: 29 FDNLYLDVNGIAHNSIYNNEMTVSYSGLNLSFGGSPEIWTGIFKYISRLVNTVKPKKVVY 88
Query: 105 MAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLL 164
+A+DGVAPRAKMNQ RSRRFR++++ A + E +R
Sbjct: 89 IAVDGVAPRAKMNQ-------------------QRSRRFRSARDAA--LMEELAVRNSEF 127
Query: 165 ADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDAN 224
A+ K + FDSNCITPGT FM L+ L +++H ++ NDP W+ ++VILS ++
Sbjct: 128 AN---------KTNTFDSNCITPGTSFMYELNRQLKFFVHYQIQNDPIWRNLEVILSGSD 178
Query: 225 VP 226
+P
Sbjct: 179 IP 180
>gi|429327281|gb|AFZ79041.1| 5'-3' exoribonuclease 2, putative [Babesia equi]
Length = 1356
Score = 120 bits (301), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 68/176 (38%), Positives = 96/176 (54%), Gaps = 25/176 (14%)
Query: 53 FDNLYLDMNGIIHPCTHPEDKPAPK--DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGV 110
FDNLYLD+NGIIH C+H + E+++ V+IF CI + IVRP KLLY+A+DGV
Sbjct: 58 FDNLYLDVNGIIHNCSHSDANLCQNIHSEEDIFVSIFHCITNIVNIVRPNKLLYLAVDGV 117
Query: 111 APRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCIL 170
AP AK+NQ R RRFRAS E +I + I + +G
Sbjct: 118 APTAKINQ-------------------QRERRFRASAEMENQILVMNSID---IQNGVEE 155
Query: 171 PPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
P ++ FD ITPGTPFM L+ L ++ + + WK ++V++S ++VP
Sbjct: 156 KPNTDE-YKFDPLQITPGTPFMERLTLHLQFFAQKMIAENKSWKNLQVVVSGSDVP 210
>gi|440299483|gb|ELP92037.1| 5'->3' exoribonuclease, putative [Entamoeba invadens IP1]
Length = 661
Score = 120 bits (300), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 91/185 (49%), Gaps = 45/185 (24%)
Query: 42 DSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRK 101
D + N G +FD ++D NGI+H C+HP AP E E+ IF +D VRPRK
Sbjct: 29 DLREQNHCGRDFDTFFIDFNGIVHNCSHPAHDVAPVSEAELFDRIFAQLDHYINYVRPRK 88
Query: 102 LLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIRE 161
L+Y+A+DGV P AK+ Q R RR+ +++ +
Sbjct: 89 LVYIAVDGVCPFAKIVQ-------------------QRKRRYISARGNS----------- 118
Query: 162 KLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILS 221
G+ FDSNCITPGTPFM LS LH Y+ +R++ + W + VILS
Sbjct: 119 ---------------GTSFDSNCITPGTPFMERLSVALHAYVTNRMDTNLYWSSLSVILS 163
Query: 222 DANVP 226
+ NVP
Sbjct: 164 NPNVP 168
>gi|154295528|ref|XP_001548199.1| hypothetical protein BC1G_13389 [Botryotinia fuckeliana B05.10]
Length = 854
Score = 119 bits (299), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 66/144 (45%), Positives = 86/144 (59%), Gaps = 20/144 (13%)
Query: 83 MVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRR 142
M+ IF+ DR+ +VRPRKLL +AIDGVAPRAKMNQ RSRR
Sbjct: 1 MLEIFKYTDRVVNMVRPRKLLMIAIDGVAPRAKMNQ-------------------QRSRR 41
Query: 143 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYY 202
FR+++E EK + A + + L + G + E E +DSN ITPGTPFM L+ L Y+
Sbjct: 42 FRSAQEAKEKAEDKAELLKMLKSQGSHIE-ETEVKKAWDSNEITPGTPFMDILALSLRYW 100
Query: 203 IHDRLNNDPGWKGIKVILSDANVP 226
I +LN DP W +KVI+SD+ VP
Sbjct: 101 IAYKLNTDPAWAKMKVIISDSTVP 124
>gi|403368617|gb|EJY84145.1| 5'-3' exoribonuclease 2 [Oxytricha trifallax]
Length = 1735
Score = 119 bits (298), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 69/180 (38%), Positives = 100/180 (55%), Gaps = 39/180 (21%)
Query: 54 DNLYLDMNGIIHPCTHPEDKPAPK------DEDEMMVAIFECIDRLFRIVRPRKLLYMAI 107
DNLYLD+NGI+H C H D + + +E+ + I + ID L ++P+KLL++A+
Sbjct: 31 DNLYLDLNGIVHNCIHGNDAKLHERVSQLENFEEVWINIMKAIDELVHTIKPKKLLFLAV 90
Query: 108 DGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADG 167
DGVAPRAKMNQ R+RRFR +K++ +++K +G
Sbjct: 91 DGVAPRAKMNQ-------------------QRARRFRTAKDS-------QLLKDKFQKEG 124
Query: 168 CILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGI-KVILSDANVP 226
KE + FDSN I+PGT FM LS L +++ + N DP ++ + KVILSDA VP
Sbjct: 125 ------KEAPTLFDSNAISPGTKFMEELSKQLDFFVQYKQNTDPVYQNLEKVILSDAFVP 178
>gi|328767906|gb|EGF77954.1| hypothetical protein BATDEDRAFT_91231 [Batrachochytrium
dendrobatidis JAM81]
Length = 126
Score = 119 bits (298), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 52/78 (66%), Positives = 62/78 (79%)
Query: 30 LPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFEC 89
+PQ V +P D++ PNPNG E+DNLYLDMNGIIHPC HPEDKPAP EDEM + IF+
Sbjct: 30 IPQSVGNTIVPVDTTLPNPNGTEYDNLYLDMNGIIHPCCHPEDKPAPTTEDEMYIEIFKY 89
Query: 90 IDRLFRIVRPRKLLYMAI 107
IDR+ I+RPRK+LYMAI
Sbjct: 90 IDRIMAIIRPRKVLYMAI 107
>gi|401420072|ref|XP_003874525.1| putative exoribonuclease 2 [Leishmania mexicana MHOM/GT/2001/U1103]
gi|322490761|emb|CBZ26025.1| putative exoribonuclease 2 [Leishmania mexicana MHOM/GT/2001/U1103]
Length = 893
Score = 119 bits (298), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 75/204 (36%), Positives = 112/204 (54%), Gaps = 31/204 (15%)
Query: 29 SLPQEV-----NGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTH-PEDKPAPKDEDEM 82
++PQ+V GQ +P + + +DN Y+DMNG+IHPC H P P++E+EM
Sbjct: 20 NIPQDVVDAAFKGQALP----HSHASAYSYDNFYVDMNGLIHPCCHDTAPLPEPENEEEM 75
Query: 83 MVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRR 142
+F+ +D L R+VRP+K L + +DGVAPR+KMNQ RSRR
Sbjct: 76 FERMFDQLDLLVRVVRPKKCLVLCVDGVAPRSKMNQ-------------------QRSRR 116
Query: 143 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYY 202
FRA+ E E A ++++++ + P +D N ITP T FM ++ L +Y
Sbjct: 117 FRAADERLESDAISNACADRIVSEYHL--PRPRVRERWDHNVITPSTAFMERVALALEWY 174
Query: 203 IHDRLNNDPGWKGIKVILSDANVP 226
I +LN D GW+ + V+ SDA+VP
Sbjct: 175 IMKKLNEDAGWRHLTVVFSDAHVP 198
>gi|403367227|gb|EJY83428.1| 5'-3' exonuclease [Oxytricha trifallax]
Length = 1484
Score = 119 bits (298), Expect = 1e-24, Method: Composition-based stats.
Identities = 71/180 (39%), Positives = 100/180 (55%), Gaps = 39/180 (21%)
Query: 54 DNLYLDMNGIIHPCTHPEDKPAPK------DEDEMMVAIFECIDRLFRIVRPRKLLYMAI 107
DNLYLD+NGI+H C H D + D DE+ V+I ID + V+P+KLL++A+
Sbjct: 31 DNLYLDLNGIVHNCIHGNDPSKHEKVSKMEDFDEVWVSIMRAIDEIVHSVKPKKLLFLAV 90
Query: 108 DGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADG 167
DGVAPRAKMNQ R+RRFR++KE E RE+L +G
Sbjct: 91 DGVAPRAKMNQ-------------------QRARRFRSAKEAFES-------REQLRQEG 124
Query: 168 CILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGI-KVILSDANVP 226
KE FD+N I+PGT FM L LH+++ + N DP ++ + +VI+SD ++P
Sbjct: 125 ------KEAPELFDTNAISPGTQFMFELCKQLHFFVQYKTNVDPLYQNLAQVIVSDGSIP 178
>gi|281206450|gb|EFA80636.1| 5'-3' exoribonuclease [Polysphondylium pallidum PN500]
Length = 538
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 99/181 (54%), Gaps = 37/181 (20%)
Query: 42 DSSKPNPNGMEFDNLYLDMNGIIHPCTHP-EDKPAPKDEDEMMVAIFECIDRLFRIVRPR 100
DS+ P E+DNLYLDMNGIIH C+ + E+E++ + ID+LF I+RP+
Sbjct: 284 DSTAP-----EYDNLYLDMNGIIHACSQEISNSLLTFSEEELIRKVCNYIDKLFHIIRPK 338
Query: 101 KLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIR 160
KLLYMAIDGVAPR+K+NQ R RRF + + + +
Sbjct: 339 KLLYMAIDGVAPRSKLNQ-------------------QRQRRFLS-------VFLEDKAK 372
Query: 161 EKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVIL 220
+K++++G +P F ITPGT FM+ LS CL ++I ++N D W+ +++I
Sbjct: 373 QKMISEGKEIPE-----VIFSRTAITPGTEFMSNLSDCLQFFIKKKINEDMSWREVEIIF 427
Query: 221 S 221
S
Sbjct: 428 S 428
>gi|194762996|ref|XP_001963620.1| GF20490 [Drosophila ananassae]
gi|190629279|gb|EDV44696.1| GF20490 [Drosophila ananassae]
Length = 1605
Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 90/177 (50%), Gaps = 33/177 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGI+H C+HP+D +E ++ IF +D+LF +++P++L ++A+DG
Sbjct: 28 EFDNLYLDMNGIVHNCSHPDDSNIHFHLEEAQIFQDIFNYVDKLFYLIKPQRLFFLAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ E ++ K L G
Sbjct: 88 VAPRAKMNQ--------------------------QRSRRFRSSREAEQMESKALQRG-- 119
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
E+ + FDSNCITPGT FM L L ++ +++ DP W+ VILS P
Sbjct: 120 ---ERREHERFDSNCITPGTEFMQRLQVRLRAFLQTKISTDPLWQRCSVILSGQETP 173
>gi|238593916|ref|XP_002393329.1| hypothetical protein MPER_06950 [Moniliophthora perniciosa FA553]
gi|215460659|gb|EEB94259.1| hypothetical protein MPER_06950 [Moniliophthora perniciosa FA553]
Length = 332
Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/133 (48%), Positives = 85/133 (63%), Gaps = 23/133 (17%)
Query: 96 IVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAE 155
+VRPRKLL+MAIDGVAPRAKMNQ RSRRFRA++E EK E
Sbjct: 1 MVRPRKLLFMAIDGVAPRAKMNQ-------------------QRSRRFRAAQEAKEK--E 39
Query: 156 VARIREKLLAD--GCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGW 213
AR+ L + G + +++ +DSN ITPGTPFM L+A L Y++ ++N+DPGW
Sbjct: 40 EARLESVRLWEEMGKTISEDEKNKKAWDSNAITPGTPFMTLLAASLRYWVVQKMNSDPGW 99
Query: 214 KGIKVILSDANVP 226
K ++VI+SDA+VP
Sbjct: 100 KNLQVIISDASVP 112
>gi|154345762|ref|XP_001568818.1| putative exoribonuclease 2 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134066160|emb|CAM43950.1| putative exoribonuclease 2 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 899
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/204 (36%), Positives = 112/204 (54%), Gaps = 31/204 (15%)
Query: 29 SLPQEV-----NGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTH-PEDKPAPKDEDEM 82
++PQ+V GQ +P + + + +DN Y+DMNG+IHPC H P P++E+EM
Sbjct: 20 NVPQDVVDAAFKGQALP----RSHASAYSYDNFYVDMNGLIHPCCHDTAPLPEPENEEEM 75
Query: 83 MVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRR 142
+F+ +D L R+VRP+K L + IDGVAPR+KMNQ RSRR
Sbjct: 76 FERMFDQLDLLVRVVRPKKCLVLCIDGVAPRSKMNQ-------------------QRSRR 116
Query: 143 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYY 202
FRA+ E E A ++++++ + P +D N ITP T FM ++ L +Y
Sbjct: 117 FRAADERLESDAISNACADRIVSEYSL--PRPRVRERWDHNVITPSTAFMERVALALEWY 174
Query: 203 IHDRLNNDPGWKGIKVILSDANVP 226
I +LN D W+ + V+ SDA+VP
Sbjct: 175 IMKKLNEDAEWRHLTVVFSDAHVP 198
>gi|321466088|gb|EFX77085.1| hypothetical protein DAPPUDRAFT_24169 [Daphnia pulex]
Length = 288
Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 89/176 (50%), Gaps = 47/176 (26%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAPKD-EDEMMVAIFECIDRLFRIVRPRKLLYMAIDGV 110
E+DNLY+D+N I+H C D E +M +FE ID++F IVRPRKLLY+A+DGV
Sbjct: 1 EYDNLYIDLNEIVHNCVRAARFHNADDRERRIMEILFEKIDQIFSIVRPRKLLYVALDGV 60
Query: 111 APRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCIL 170
APRAK Q R RRF SK
Sbjct: 61 APRAKRTQ-------------------QRIRRFGRSK----------------------- 78
Query: 171 PPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
P + E FD NC++PGT FM LS L Y+ +L+NDP WK I VI SD+NVP
Sbjct: 79 PNQDE----FDGNCVSPGTSFMCTLSKNLMLYVDRKLSNDPQWKNISVIFSDSNVP 130
>gi|146104232|ref|XP_001469769.1| putative exoribonuclease 2 [Leishmania infantum JPCM5]
gi|134074139|emb|CAM72881.1| putative exoribonuclease 2 [Leishmania infantum JPCM5]
Length = 879
Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/204 (36%), Positives = 111/204 (54%), Gaps = 31/204 (15%)
Query: 29 SLPQEV-----NGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTH-PEDKPAPKDEDEM 82
++PQ+V GQ +P + + +DN Y+DMNG+IHPC H P P++E+EM
Sbjct: 20 NIPQDVVDAAFKGQTLPHS----HASAYSYDNFYVDMNGLIHPCCHDTAPLPEPENEEEM 75
Query: 83 MVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRR 142
+F+ +D L R+VRP+K L + +DGVAPR+KMNQ RSRR
Sbjct: 76 FERMFDQLDLLVRVVRPKKCLVLCVDGVAPRSKMNQ-------------------QRSRR 116
Query: 143 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYY 202
FRA+ E E A ++++++ + P +D N ITP T FM ++ L +Y
Sbjct: 117 FRAADERLESDAISNACADRIVSEYHL--PRPRVRERWDHNVITPSTAFMERVALALEWY 174
Query: 203 IHDRLNNDPGWKGIKVILSDANVP 226
I +LN D W+ + V+ SDA+VP
Sbjct: 175 IMKKLNEDAAWRHLTVVFSDAHVP 198
>gi|398024282|ref|XP_003865302.1| exoribonuclease 2, putative [Leishmania donovani]
gi|322503539|emb|CBZ38625.1| exoribonuclease 2, putative [Leishmania donovani]
Length = 879
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/204 (36%), Positives = 111/204 (54%), Gaps = 31/204 (15%)
Query: 29 SLPQEV-----NGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTH-PEDKPAPKDEDEM 82
++PQ+V GQ +P + + +DN Y+DMNG+IHPC H P P++E+EM
Sbjct: 20 NIPQDVVDAAFKGQTLPHS----HASAYSYDNFYVDMNGLIHPCCHDTAPLPEPENEEEM 75
Query: 83 MVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRR 142
+F+ +D L R+VRP+K L + +DGVAPR+KMNQ RSRR
Sbjct: 76 FERMFDQLDLLVRVVRPKKCLVLCVDGVAPRSKMNQ-------------------QRSRR 116
Query: 143 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYY 202
FRA+ E E A ++++++ + P +D N ITP T FM ++ L +Y
Sbjct: 117 FRAADERLESDAISNACADRIVSEYHL--PRPRVRERWDHNVITPSTAFMERVALALEWY 174
Query: 203 IHDRLNNDPGWKGIKVILSDANVP 226
I +LN D W+ + V+ SDA+VP
Sbjct: 175 IMKKLNEDAAWRHLTVVFSDAHVP 198
>gi|432111908|gb|ELK34946.1| 5'-3' exoribonuclease 1 [Myotis davidii]
Length = 1223
Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 64/139 (46%), Positives = 81/139 (58%), Gaps = 32/139 (23%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+HP D +D++ IF ++ LFRI++PRK+ +MA+DG
Sbjct: 28 EFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI 169
VAPRAKMNQ R RRFR++KE +KI +K + G
Sbjct: 88 VAPRAKMNQ-------------------QRGRRFRSAKEAEDKI-------KKAIEKGET 121
Query: 170 LPPEKEKGSHFDSNCITPG 188
LP E + FDSNCITPG
Sbjct: 122 LPTE----ARFDSNCITPG 136
>gi|321466089|gb|EFX77086.1| hypothetical protein DAPPUDRAFT_31800 [Daphnia pulex]
Length = 288
Score = 116 bits (290), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 89/176 (50%), Gaps = 47/176 (26%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAPKD-EDEMMVAIFECIDRLFRIVRPRKLLYMAIDGV 110
++DNLY+D+N I+H C D E +M +FE ID++F IVRPRKLLY+A+DGV
Sbjct: 1 DYDNLYIDLNEIVHNCVRAARFHKADDRERRIMEILFEKIDQIFSIVRPRKLLYVALDGV 60
Query: 111 APRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCIL 170
APRAK Q R RRF SK
Sbjct: 61 APRAKRTQ-------------------QRIRRFGRSK----------------------- 78
Query: 171 PPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
P + E FD NC++PGT FM LS L Y+ +L+NDP WK I VI SD+NVP
Sbjct: 79 PNQDE----FDGNCVSPGTSFMCTLSKNLMLYVDRKLSNDPQWKNISVIFSDSNVP 130
>gi|157876822|ref|XP_001686753.1| putative exoribonuclease 2 [Leishmania major strain Friedlin]
gi|68129828|emb|CAJ09134.1| putative exoribonuclease 2 [Leishmania major strain Friedlin]
Length = 895
Score = 116 bits (290), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 74/204 (36%), Positives = 110/204 (53%), Gaps = 31/204 (15%)
Query: 29 SLPQEV-----NGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTH-PEDKPAPKDEDEM 82
++PQ+V GQ +P + + +DN Y+DMNG+IHPC H P P++E+EM
Sbjct: 20 NIPQDVVDAAFKGQALPHS----HASAYSYDNFYVDMNGLIHPCCHDTAPLPEPENEEEM 75
Query: 83 MVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRR 142
+F+ +D L R+VRP+K L + +DGVAPR+KMNQ RSRR
Sbjct: 76 FERMFDQLDLLVRVVRPKKCLVLCVDGVAPRSKMNQ-------------------QRSRR 116
Query: 143 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYY 202
FRA+ E E A + ++++ + P +D N ITP T FM ++ L +Y
Sbjct: 117 FRAADERLESDAISNACADSIVSEYHL--PRPRVRERWDHNVITPSTAFMERVALALEWY 174
Query: 203 IHDRLNNDPGWKGIKVILSDANVP 226
I +LN D W+ + V+ SDA+VP
Sbjct: 175 IMKKLNEDAAWRHLTVVFSDAHVP 198
>gi|367000872|ref|XP_003685171.1| hypothetical protein TPHA_0D00960 [Tetrapisispora phaffii CBS 4417]
gi|357523469|emb|CCE62737.1| hypothetical protein TPHA_0D00960 [Tetrapisispora phaffii CBS 4417]
Length = 1313
Score = 116 bits (290), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 90/178 (50%), Gaps = 31/178 (17%)
Query: 53 FDNLYLDMNGIIHPCTHPED---KPAPKDEDEMMVA-IFECIDRLFRIVRPRKLLYMAID 108
FD LYLDMN I H TH D DE++ + IF ID +F +++P ++YMAID
Sbjct: 29 FDYLYLDMNSIFHMATHSNDVSDDVGKGTTDEVIYSRIFTYIDHIFLMIKPTTIIYMAID 88
Query: 109 GVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGC 168
GVAPRAKMNQ RSRR R + + + I + + D
Sbjct: 89 GVAPRAKMNQ-------------------QRSRRIRTAMDAEKAIDAMKNAIGEENWDSS 129
Query: 169 ILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
+ P FD N ITPGT FMA L+ L Y+IH++ ND W+ ++VI S VP
Sbjct: 130 MEP--------FDKNSITPGTEFMAQLTINLKYFIHEKKTNDSNWRDVQVIFSGHEVP 179
>gi|399216467|emb|CCF73155.1| unnamed protein product [Babesia microti strain RI]
Length = 1209
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 98/179 (54%), Gaps = 24/179 (13%)
Query: 51 MEFDNLYLDMNGIIHPCTHPEDKPAPKDED---EMMVAIFECIDRLFRIVRPRKLLYMAI 107
+ FD LYLDMNGI+H C + +K +D ++ ++IF+ I ++ + +P+KLLY+A+
Sbjct: 41 LPFDALYLDMNGIVHICAY-SNKEFSRDISSLGDIWLSIFQYITKIVNLAKPKKLLYLAV 99
Query: 108 DGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADG 167
DGVAP+AKMNQ R+RRFR+ E+ ++ A + K A+G
Sbjct: 100 DGVAPKAKMNQ-------------------QRTRRFRSVAESEQR-ANLNEECAKYFANG 139
Query: 168 CILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
P + G FD CITPGT FM + + Y+ + D W +KVI+S ANVP
Sbjct: 140 YDDPVRGKDGFVFDPTCITPGTKFMHEFTTQIEKYVAKMIKADTYWSKLKVIVSGANVP 198
>gi|330800198|ref|XP_003288125.1| hypothetical protein DICPUDRAFT_87898 [Dictyostelium purpureum]
gi|325081816|gb|EGC35318.1| hypothetical protein DICPUDRAFT_87898 [Dictyostelium purpureum]
Length = 171
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/190 (37%), Positives = 100/190 (52%), Gaps = 38/190 (20%)
Query: 37 QKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHP-EDKPAPKDEDEMMVAIFECIDRLFR 95
QKI DS+ P E+DNLYLDMNGIIH C+ + E+E++ + +DRLF
Sbjct: 19 QKI-IDSTPP-----EYDNLYLDMNGIIHACSQEFANSLIEFSEEELIRKVCNYVDRLFH 72
Query: 96 IVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAE 155
+RP KL YMAIDGVAPR+K+NQ R RRF + +
Sbjct: 73 TIRPTKLFYMAIDGVAPRSKINQ-------------------QRQRRFLS-------VHR 106
Query: 156 VARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKG 215
+++++L+ADG +P F+ ITPGT FM LS L +YI +++ D W+
Sbjct: 107 DEKLKQQLIADGKPVPE-----VIFNRTAITPGTQFMYNLSEALQFYIKKKISEDLSWRE 161
Query: 216 IKVILSDANV 225
++VI S V
Sbjct: 162 VQVIFSGPEV 171
>gi|407040062|gb|EKE39962.1| 5'-3' exonuclease domain containing protein [Entamoeba nuttalli
P19]
Length = 666
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/196 (35%), Positives = 97/196 (49%), Gaps = 50/196 (25%)
Query: 30 LPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFEC 89
LPQ++ G+ + + N G E+DNLY+D NGIIH C+H E + E+E+M IF+
Sbjct: 21 LPQKIQGE----EKREKNETGEEYDNLYIDFNGIIHQCSHSEKEEEAASEEEIMERIFKA 76
Query: 90 IDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKET 149
+DR VRPRK++++ +DGV P AK+ Q R RR+ +
Sbjct: 77 MDRYVNYVRPRKMIFIGVDGVCPVAKIIQ-------------------QRKRRYCSILNN 117
Query: 150 AEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNN 209
FDSNCITPGT FM + LH YI +R++N
Sbjct: 118 T---------------------------GGFDSNCITPGTKFMEKIGIALHGYIVNRMDN 150
Query: 210 DPGWKGIKVILSDANV 225
D W G+KVILSD+ V
Sbjct: 151 DLYWSGLKVILSDSKV 166
>gi|66819171|ref|XP_643245.1| 5'-3' exoribonuclease [Dictyostelium discoideum AX4]
gi|60471408|gb|EAL69368.1| 5'-3' exoribonuclease [Dictyostelium discoideum AX4]
Length = 1749
Score = 113 bits (283), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 100/191 (52%), Gaps = 38/191 (19%)
Query: 37 QKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHP-EDKPAPKDEDEMMVAIFECIDRLFR 95
QKI DS+ P E+DNLYLDMNGIIH C+ + E+E++ + +DRLF
Sbjct: 19 QKI-LDSNPP-----EYDNLYLDMNGIIHACSQEFANSLIEFSEEELIRQVCNYVDRLFH 72
Query: 96 IVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAE 155
+RP KL YMAIDGVAPR+K+NQ R RRF + +
Sbjct: 73 TIRPTKLFYMAIDGVAPRSKINQ-------------------QRQRRFLS-------VHR 106
Query: 156 VARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKG 215
++++KL+++G +P F+ ITPGT FM LS + +YI +++ D W+
Sbjct: 107 DEKLKQKLISEGKPVPE-----VIFNRTAITPGTQFMYNLSESIQFYIKKKISEDLSWRE 161
Query: 216 IKVILSDANVP 226
++VI S P
Sbjct: 162 VRVIFSGPENP 172
>gi|162606084|ref|XP_001713557.1| very similar to mouse Dhm1 and Dhm2 [Guillardia theta]
gi|13794477|gb|AAK39852.1|AF165818_60 very similar to mouse Dhm1 and Dhm2 [Guillardia theta]
Length = 542
Score = 113 bits (283), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 87/176 (49%), Gaps = 35/176 (19%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVA 111
EFD YLDMNGIIH C ++D + IF+ + L+ I+ P+KLLY+AIDGVA
Sbjct: 26 EFDCFYLDMNGIIHTCFQKIASEQNFNKDILFQKIFDYTEYLYTIIHPKKLLYLAIDGVA 85
Query: 112 PRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCILP 171
PRAKMNQ RSRRFRA K+ +K R R L
Sbjct: 86 PRAKMNQ-------------------QRSRRFRAIKDNEKKSDFDHRNRLNLT------- 119
Query: 172 PEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWK-GIKVILSDANVP 226
DSNCITPGT FMA LS ++ ++ D W+ G +I S A VP
Sbjct: 120 --------LDSNCITPGTSFMAELSYAFKIWLEKKIKTDIEWQTGCDIIFSGAEVP 167
>gi|71030174|ref|XP_764729.1| hypothetical protein [Theileria parva strain Muguga]
gi|68351685|gb|EAN32446.1| hypothetical protein TP02_0165 [Theileria parva]
Length = 1726
Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 71/203 (34%), Positives = 105/203 (51%), Gaps = 50/203 (24%)
Query: 48 PNGMEFDNLYLDMNGIIHPCTHPEDKPAPKD--EDEMMVAIFECIDRLFRIVRPRKLLYM 105
P+G FDNLYLD+NGI+H C+H ED++ V+IF+CI ++ IVRPRKLLY+
Sbjct: 101 PDG--FDNLYLDVNGIVHNCSHSVVDLCQNITCEDDIFVSIFQCIIKIVNIVRPRKLLYL 158
Query: 106 AIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLA 165
A+DGVAPRAK+ Q R RRFRA+ E+ +++ I + L +
Sbjct: 159 AVDGVAPRAKIIQ-------------------QRERRFRAALESTQQLI----ISQSLKS 195
Query: 166 DGCILPP----------------------EKEKGSHFDSNCITPGTPFMACLSACLHYYI 203
L P +KE+ FD ITPGT FM L+ L ++
Sbjct: 196 TNTHLEPSLHNLQCEPDESVQCEPDESVRDKEEFK-FDPIQITPGTAFMERLTVRLQFFA 254
Query: 204 HDRLNNDPGWKGIKVILSDANVP 226
+N + W+ +K+++S ++VP
Sbjct: 255 LKMINENEQWRNLKIVVSGSDVP 277
>gi|345495292|ref|XP_001606765.2| PREDICTED: 5'-3' exoribonuclease 1-like [Nasonia vitripennis]
Length = 1200
Score = 112 bits (281), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 98/187 (52%), Gaps = 53/187 (28%)
Query: 52 EFDNLYLDMNGIIHPCTHPED--------KPAPKDEDEMMVAIFECIDR----LFRIVRP 99
++DNLYLDMN IIH C+HP D K DED IFE + R +FRIV+P
Sbjct: 28 QYDNLYLDMNSIIHTCSHPTDSDVHFRIGKKEFSDED-----IFENVSRYVEIIFRIVKP 82
Query: 100 RKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARI 159
++L++A DGVAPRAKMNQ R+ RFR +++ + I E
Sbjct: 83 LEMLFLAFDGVAPRAKMNQ-------------------QRANRFRVARDNS--ILE---- 117
Query: 160 REKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVI 219
RE LL D FD+N ITPGT FMA L + ++I +++ DP W+ K+I
Sbjct: 118 REILLTDKL-----------FDANSITPGTVFMADLIDHMKHFIAYKVSTDPLWQKCKII 166
Query: 220 LSDANVP 226
LS + P
Sbjct: 167 LSGSEAP 173
>gi|242067311|ref|XP_002448932.1| hypothetical protein SORBIDRAFT_05g001880 [Sorghum bicolor]
gi|241934775|gb|EES07920.1| hypothetical protein SORBIDRAFT_05g001880 [Sorghum bicolor]
Length = 712
Score = 112 bits (281), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 66/151 (43%), Positives = 85/151 (56%), Gaps = 20/151 (13%)
Query: 76 PKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTW 135
P E+ ++FE +DRLFRIVRP +LLY+A+DGVAP AKMN+
Sbjct: 27 PMTVSEVFESLFEYMDRLFRIVRPTRLLYLAVDGVAPCAKMNR----------------- 69
Query: 136 QLMRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACL 195
+R RF +++ + E +R++L A G P+ E D N ITPGT FM L
Sbjct: 70 --VRRGRFHSARMATSEEIEDYEMRKELRAQGKEETPQ-EISEVSDPNVITPGTEFMEKL 126
Query: 196 SACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
S L YYI R N+DP W+ I VILSDANVP
Sbjct: 127 SQALEYYIRGRFNSDPWWRDIMVILSDANVP 157
>gi|190345269|gb|EDK37129.2| hypothetical protein PGUG_01227 [Meyerozyma guilliermondii ATCC
6260]
Length = 909
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/148 (43%), Positives = 88/148 (59%), Gaps = 25/148 (16%)
Query: 82 MMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSR 141
M + +F+ DR+ + RPRK+L +A+DGVAPRAKMNQ RSR
Sbjct: 1 MFLDVFKYTDRVLMMARPRKVLMIAVDGVAPRAKMNQ-------------------QRSR 41
Query: 142 RFRASKETAEKIAEVAR---IREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSAC 198
RFR+++E KIA+ + I+E+ L I K K S +DSN ITPGTPFM L+
Sbjct: 42 RFRSAQEA--KIADEEKQRQIKERELRGESIDEAIKGKRS-WDSNAITPGTPFMDKLATA 98
Query: 199 LHYYIHDRLNNDPGWKGIKVILSDANVP 226
L Y++ +L +DPGW ++VI+SDA VP
Sbjct: 99 LRYWVAYKLTSDPGWANVQVIISDATVP 126
>gi|70926599|ref|XP_735814.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56509808|emb|CAH84865.1| hypothetical protein PC301271.00.0 [Plasmodium chabaudi chabaudi]
Length = 260
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/143 (44%), Positives = 81/143 (56%), Gaps = 22/143 (15%)
Query: 83 MVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRR 142
+ IF I+RLF I+ P+KLLYMAIDGVAP+AKMNQ RSRR
Sbjct: 1 FLNIFLYIERLFDIIEPQKLLYMAIDGVAPKAKMNQQ-------------------RSRR 41
Query: 143 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYY 202
F++ + + +R K L++ +P E +H+DSN ITPGT FM LS L Y+
Sbjct: 42 FKSILASEIEKRAYIELRNKFLSENRNVPDEY---NHWDSNIITPGTQFMHELSIALKYF 98
Query: 203 IHDRLNNDPGWKGIKVILSDANV 225
I ++ ND WK I VI SDANV
Sbjct: 99 IEHKITNDEKWKKIVVIFSDANV 121
>gi|146419185|ref|XP_001485556.1| hypothetical protein PGUG_01227 [Meyerozyma guilliermondii ATCC
6260]
Length = 909
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/148 (43%), Positives = 88/148 (59%), Gaps = 25/148 (16%)
Query: 82 MMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSR 141
M + +F+ DR+ + RPRK+L +A+DGVAPRAKMNQ RSR
Sbjct: 1 MFLDVFKYTDRVLMMARPRKVLMIAVDGVAPRAKMNQ-------------------QRSR 41
Query: 142 RFRASKETAEKIAEVAR---IREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSAC 198
RFR+++E KIA+ + I+E+ L I K K S +DSN ITPGTPFM L+
Sbjct: 42 RFRSAQEA--KIADEEKQRQIKERELRGESIDEAIKGKRS-WDSNAITPGTPFMDKLATA 98
Query: 199 LHYYIHDRLNNDPGWKGIKVILSDANVP 226
L Y++ +L +DPGW ++VI+SDA VP
Sbjct: 99 LRYWVAYKLTSDPGWANVQVIISDATVP 126
>gi|242023600|ref|XP_002432220.1| 5'-3' exoribonuclease, putative [Pediculus humanus corporis]
gi|212517617|gb|EEB19482.1| 5'-3' exoribonuclease, putative [Pediculus humanus corporis]
Length = 1587
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 94/174 (54%), Gaps = 33/174 (18%)
Query: 53 FDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAP 112
F+N Y+D+N IIH C +D+ A E+ IF I+ LF +++P+KL ++++DGVAP
Sbjct: 29 FENFYIDLNEIIHVCF--KDETASGKTKEIFSKIFTYIEFLFNLIKPKKLFFLSVDGVAP 86
Query: 113 RAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCILPP 172
+AKMN R RRF+A+KE + +KLLA+G +P
Sbjct: 87 KAKMNN-------------------QRGRRFQAAKELENE-------NQKLLAEGKPIPD 120
Query: 173 EKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
E +F+S CI+PGT FM L L+Y+I +++ D W+ I VI S P
Sbjct: 121 E-----NFNSLCISPGTEFMEELDKHLNYFIRKKISTDSMWQKIVVIYSGYKTP 169
>gi|403221749|dbj|BAM39881.1| 5'-3' exoribonuclease 2 [Theileria orientalis strain Shintoku]
Length = 1374
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 100/190 (52%), Gaps = 25/190 (13%)
Query: 40 PFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPK--DEDEMMVAIFECIDRLFRIV 97
P + +P P+G FDNLYLD+NGI+H C+H ED++ V+IF+CI L IV
Sbjct: 48 PLFTYRP-PDG--FDNLYLDVNGIVHNCSHSIADLCQNITSEDDIFVSIFQCIINLVNIV 104
Query: 98 RPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVA 157
RP+ LLY+A+DGVAPRAK+ Q R RRFR++ E + +
Sbjct: 105 RPKSLLYLAVDGVAPRAKIIQ-------------------QRERRFRSASEATIQQLILE 145
Query: 158 RIREKLLADGCILPPEKEKGSH-FDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGI 216
+ E D E +K FD ITPGT FM L+ L ++ +N + W+ +
Sbjct: 146 SLTELGDQDEDTQGEETQKEEFKFDPIQITPGTAFMERLTTRLQFFALKMINENELWRNL 205
Query: 217 KVILSDANVP 226
K+++S + VP
Sbjct: 206 KIVVSGSEVP 215
>gi|167377811|ref|XP_001734553.1| 5'->3' exoribonuclease [Entamoeba dispar SAW760]
gi|165903890|gb|EDR29281.1| 5'->3' exoribonuclease, putative [Entamoeba dispar SAW760]
Length = 662
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/196 (36%), Positives = 98/196 (50%), Gaps = 50/196 (25%)
Query: 30 LPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFEC 89
LP+E+ G+ D + N G E+DNLY+D NGIIH C+H E + K E+E+M IF+
Sbjct: 21 LPKEIQGK----DKREKNETGEEYDNLYIDFNGIIHQCSHSEKEEEAKSEEEIMERIFKE 76
Query: 90 IDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKET 149
IDR VRPRK++++ +DGV P AK+ Q R RR+
Sbjct: 77 IDRYVNYVRPRKMIFIGVDGVCPVAKIIQ-------------------QRKRRY------ 111
Query: 150 AEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNN 209
C + FDSN ITPGT FM + LH YI +R++N
Sbjct: 112 ------------------CSII---NNNGGFDSNSITPGTKFMEKIGIALHGYIVNRMDN 150
Query: 210 DPGWKGIKVILSDANV 225
D W G++VILSD+ V
Sbjct: 151 DIYWSGLRVILSDSKV 166
>gi|300120088|emb|CBK19642.2| unnamed protein product [Blastocystis hominis]
Length = 574
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 101/177 (57%), Gaps = 22/177 (12%)
Query: 53 FDNLYLDMNGIIHPCTHPED-KPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVA 111
FDN Y+DMNGIIH C H + P++ D+++ + +DRL V PRKLL+M++DGVA
Sbjct: 50 FDNFYIDMNGIIHDCAHGQILGSTPRNTDDVLENLQNYLDRLITAVNPRKLLFMSVDGVA 109
Query: 112 PRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCILP 171
P+AK+ + R RRFR+ E+ E +++++++A+G P
Sbjct: 110 PKAKVKE-------------------QRGRRFRSGYESVEIKQLEEQLKKEMIAEGFQFP 150
Query: 172 PE--KEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
P+ +E+ F+S I PGT FM+ L L YY+ L ++ + + V++SD++VP
Sbjct: 151 PDVEEEEEESFNSLNIFPGTDFMSELQVFLDYYVTKTLQSNEKLQNLNVLISDSDVP 207
>gi|328865598|gb|EGG13984.1| 5'-3' exoribonuclease [Dictyostelium fasciculatum]
Length = 1808
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/171 (39%), Positives = 93/171 (54%), Gaps = 32/171 (18%)
Query: 52 EFDNLYLDMNGIIHPCTHP-EDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGV 110
E+DNLYLDMNGIIH C+ K E+E++ + ID+LF I+RP KLLYMAIDGV
Sbjct: 227 EYDNLYLDMNGIIHACSQEMTTKLIRFSEEELIRLVCNYIDKLFHIIRPTKLLYMAIDGV 286
Query: 111 APRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCIL 170
APR+K+NQ R RRF + ++ E+ + ++L
Sbjct: 287 APRSKLNQ-------------------QRQRRFLSVFREEKEKKELIKEGKEL------- 320
Query: 171 PPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILS 221
PE F N ITPGT FM+ LS CL ++I +++ D W+ I++I S
Sbjct: 321 -PE----VIFSRNAITPGTEFMSNLSECLQFFIKKKISEDLSWREIEIIFS 366
>gi|320580141|gb|EFW94364.1| 5'-3' exoribonuclease, putative [Ogataea parapolymorpha DL-1]
Length = 1369
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/148 (41%), Positives = 85/148 (57%), Gaps = 30/148 (20%)
Query: 79 EDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLM 138
+D+M AIF ID LF I++P+K+ YMAIDGVAPRAKMNQ
Sbjct: 3 DDQMFGAIFAYIDHLFNIIKPQKVFYMAIDGVAPRAKMNQ-------------------Q 43
Query: 139 RSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSAC 198
R+RRFR++ E + + EK + +G +P E FDSN ITPGT FMA L+
Sbjct: 44 RARRFRSAIEAEQNL-------EKAIKEGKEIPKE----PPFDSNAITPGTEFMAKLTQN 92
Query: 199 LHYYIHDRLNNDPGWKGIKVILSDANVP 226
L +YI+ + ++D W+ +++ILS VP
Sbjct: 93 LKFYINQKASSDSRWQNMRIILSGHEVP 120
>gi|449703901|gb|EMD44256.1| 5'3' exonuclease domain containing protein [Entamoeba histolytica
KU27]
Length = 670
Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 96/196 (48%), Gaps = 50/196 (25%)
Query: 30 LPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFEC 89
LP ++ G+ + + N G E+DNLY+D NGIIH C+H E + E+E+M IF+
Sbjct: 21 LPPKIQGE----EKREKNEIGEEYDNLYIDFNGIIHQCSHSEKEEEATSEEEIMERIFKA 76
Query: 90 IDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKET 149
+DR VRPRK++++ +DGV P AK+ Q R RR+ +
Sbjct: 77 MDRYVNYVRPRKMIFIGVDGVCPVAKIIQ-------------------QRKRRYCSVLNN 117
Query: 150 AEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNN 209
FDSNCITPGT FM + LH YI +R++N
Sbjct: 118 T---------------------------GGFDSNCITPGTKFMEKIGIALHGYIVNRMDN 150
Query: 210 DPGWKGIKVILSDANV 225
D W G+KVILSD+ V
Sbjct: 151 DLYWSGLKVILSDSKV 166
>gi|67480967|ref|XP_655833.1| 5'-3' exonuclease domain containing protein [Entamoeba histolytica
HM-1:IMSS]
gi|56472997|gb|EAL50447.1| 5'-3' exonuclease domain containing protein [Entamoeba histolytica
HM-1:IMSS]
Length = 666
Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 96/196 (48%), Gaps = 50/196 (25%)
Query: 30 LPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFEC 89
LP ++ G+ + + N G E+DNLY+D NGIIH C+H E + E+E+M IF+
Sbjct: 21 LPPKIQGE----EKREKNEIGEEYDNLYIDFNGIIHQCSHSEKEEEATSEEEIMERIFKA 76
Query: 90 IDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKET 149
+DR VRPRK++++ +DGV P AK+ Q R RR+ +
Sbjct: 77 MDRYVNYVRPRKMIFIGVDGVCPVAKIIQ-------------------QRKRRYCSVLNN 117
Query: 150 AEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNN 209
FDSNCITPGT FM + LH YI +R++N
Sbjct: 118 T---------------------------GGFDSNCITPGTKFMEKIGIALHGYIVNRMDN 150
Query: 210 DPGWKGIKVILSDANV 225
D W G+KVILSD+ V
Sbjct: 151 DLYWSGLKVILSDSKV 166
>gi|443920066|gb|ELU40060.1| exonuclease Kem1, putative [Rhizoctonia solani AG-1 IA]
Length = 1536
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/166 (40%), Positives = 87/166 (52%), Gaps = 37/166 (22%)
Query: 68 THPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSV 125
+HP D ED++ AIF +D LF ++PRKL +MAIDGVAPRAKMNQ
Sbjct: 372 SHPNDGDVHFRLSEDQIFTAIFSYVDHLFGKIKPRKLFFMAIDGVAPRAKMNQ------- 424
Query: 126 LYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCI 185
R+RRFR +K+ E REK G LP EK FDSNCI
Sbjct: 425 ------------QRARRFRTAKDAKEA-------REKAEKKGEKLPEEKA----FDSNCI 461
Query: 186 TP-----GTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
TP GT FM LS L Y+++ +++ D W+ ++V+LS VP
Sbjct: 462 TPGMHPLGTVFMKKLSEQLKYFVNKKISEDANWREVQVVLSGHEVP 507
>gi|330040606|ref|XP_003239969.1| dhm exonuclease [Cryptomonas paramecium]
gi|327206895|gb|AEA39071.1| dhm exonuclease [Cryptomonas paramecium]
Length = 541
Score = 109 bits (273), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 88/179 (49%), Gaps = 38/179 (21%)
Query: 49 NGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAID 108
N +FD YLDMNGI+H C + +P E + IF + LFRIV+P+KL++MA D
Sbjct: 23 NQNDFDCFYLDMNGIVHSCF--QKFSSPYREKNIFQEIFFYTEYLFRIVKPKKLIFMAFD 80
Query: 109 GVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGC 168
GV+PRAKMNQ RSRRFR + ++ E++
Sbjct: 81 GVSPRAKMNQQ-------------------RSRRFRTKETNMKQNKNFTHSNEEV----- 116
Query: 169 ILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWK-GIKVILSDANVP 226
FDSNCITPGT FM LS ++ +++ D WK G VI S + VP
Sbjct: 117 -----------FDSNCITPGTEFMKRLSFFFKKWLKNKVKFDSEWKQGCDVIFSSSEVP 164
>gi|449019218|dbj|BAM82620.1| deoxyribonuclease [Cyanidioschyzon merolae strain 10D]
Length = 1527
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 93/181 (51%), Gaps = 26/181 (14%)
Query: 49 NGMEFDNLYLDMNGIIHPCTHPEDKP-APKDEDEMMVAIFECIDRLFRIVRPRKLLYMAI 107
N DN YLDMNGI+H C + P + ++++ ID L +++P++LL++A+
Sbjct: 25 NAPPVDNFYLDMNGILHNCARSAENPLGGRSDEDIYWESCNYIDMLVTLIQPKRLLFLAV 84
Query: 108 DGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADG 167
DGVAPRAKMNQ + R + EK+AE + R
Sbjct: 85 DGVAPRAKMNQ--------------------QRARRYRAATALEKVAETSHQRGNTTQR- 123
Query: 168 CILPPEKEKGSH--FDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANV 225
L E E G FDSNCITPGT FM LS L YY+ +L +D W+ ++VI+S A V
Sbjct: 124 --LRTESEAGPDRVFDSNCITPGTTFMHGLSRALLYYVAVKLESDRSWQDLEVIVSGAEV 181
Query: 226 P 226
P
Sbjct: 182 P 182
>gi|164655455|ref|XP_001728857.1| hypothetical protein MGL_4024 [Malassezia globosa CBS 7966]
gi|159102743|gb|EDP41643.1| hypothetical protein MGL_4024 [Malassezia globosa CBS 7966]
Length = 1426
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/143 (41%), Positives = 81/143 (56%), Gaps = 30/143 (20%)
Query: 79 EDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLM 138
E+++ + IF I+ LF +RPRK+ ++AIDGVAPRAKMNQ
Sbjct: 3 EEDIFLGIFAYIEHLFSKIRPRKVFFLAIDGVAPRAKMNQ-------------------Q 43
Query: 139 RSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSAC 198
RSRRFR ++E E + + R E+L PP FDSNCITPGT FM LS
Sbjct: 44 RSRRFRTAQEAKENVEKAIRRGEELPES----PP-------FDSNCITPGTSFMRKLSQQ 92
Query: 199 LHYYIHDRLNNDPGWKGIKVILS 221
L Y++ +++ D W+G++VILS
Sbjct: 93 LEYFVAKKVSEDSDWRGVEVILS 115
>gi|290992975|ref|XP_002679109.1| 5'-3' exoribonuclease [Naegleria gruberi]
gi|284092724|gb|EFC46365.1| 5'-3' exoribonuclease [Naegleria gruberi]
Length = 1047
Score = 106 bits (265), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 71/198 (35%), Positives = 95/198 (47%), Gaps = 49/198 (24%)
Query: 54 DNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPR 113
DN Y+D+NG+IHPC HP+ P++ED+MM I + +L R V+P L Y+A+DGVAP
Sbjct: 48 DNFYIDLNGLIHPCCHPQTGKKPENEDDMMKRITAELLQLARTVQPNNLFYIAVDGVAPA 107
Query: 114 AKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARI-------------- 159
AK Q R RRF A E +K+ + RI
Sbjct: 108 AKQEQ-------------------QRHRRFVAISENEQKLKFIGRIQSEITKEKDELTKE 148
Query: 160 -----------REKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLN 208
REKLL D I E +K +H+D N I+PGTPFM + +H
Sbjct: 149 IKESEVDKIQQREKLL-DSAIARMEAKK-NHWDHNVISPGTPFMMKCMSTVHQAAKLIAT 206
Query: 209 NDPGWKGIKVILSDANVP 226
P IKVI+SD++VP
Sbjct: 207 EFP---HIKVIVSDSSVP 221
>gi|188501630|gb|ACD54753.1| 5-3 exoribonuclease 2 isoform 9-like protein [Adineta vaga]
Length = 510
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 86/168 (51%), Gaps = 45/168 (26%)
Query: 60 MNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQP 119
MN II+ C + +D K EDE++ +FE ID +F I+ PR L+YM+IDGVAP+AKM+Q
Sbjct: 1 MNEIIYLCANLDDLSTLKSEDEIIQGVFEYIDEIFSIIHPRNLIYMSIDGVAPKAKMHQE 60
Query: 120 -LTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGS 178
+++Y NY A K +++
Sbjct: 61 RVSLY-------NY------------AKKHSSD-------------------------NE 76
Query: 179 HFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
F I PGT FM+ LS L YIHDR+N+ P WK I VILSDANVP
Sbjct: 77 QFTKCDIKPGTMFMSKLSDKLRSYIHDRMNSIPAWKSIIVILSDANVP 124
>gi|396082120|gb|AFN83732.1| 5-3 exoribonuclease [Encephalitozoon romaleae SJ-2008]
Length = 656
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/202 (36%), Positives = 100/202 (49%), Gaps = 14/202 (6%)
Query: 36 GQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFR 95
K+ S NP+ D LYLD N IIH C P + + E ++ + + ID +
Sbjct: 13 SHKVAIHSILENPS---VDCLYLDFNAIIHTCIKPGLESEEEIERDLHKTVGDFIDYILL 69
Query: 96 IVRPRKLLYMAIDGVAPRAKM-NQPLTVYSVLYDRGNYSTWQLMRSRRF--RASKETAEK 152
RPRKLLY+AIDGVAPRAK+ +Q Y + S+ + + F ++ KE E+
Sbjct: 70 KARPRKLLYIAIDGVAPRAKLSHQRARRYKSALGKKEGSSVKSISKTEFAPQSEKERKEE 129
Query: 153 IAEVARIREKLLADGCILPPEKEKGS--------HFDSNCITPGTPFMACLSACLHYYIH 204
+ E L D I+ E S +FD NCITPGTPFM L L YI
Sbjct: 130 GRDEEFTGESSLYDKFIVEDISESSSLAVDVETENFDLNCITPGTPFMERLHNVLISYIQ 189
Query: 205 DRLNNDPGWKGIKVILSDANVP 226
+L+NDPG +K+I S VP
Sbjct: 190 YKLSNDPGVSHLKIIYSSYLVP 211
>gi|269861191|ref|XP_002650309.1| 5'-3' exonuclease [Enterocytozoon bieneusi H348]
gi|220066257|gb|EED43747.1| 5'-3' exonuclease [Enterocytozoon bieneusi H348]
Length = 623
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 86/179 (48%), Gaps = 39/179 (21%)
Query: 54 DNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPR 113
DNLYLD N IIHPCT+ E K K +++ + +D L +P+KL+Y+AIDGVAP+
Sbjct: 10 DNLYLDFNAIIHPCTNRELKDLDKLNEDLYHNLEAYLDALIAYCKPKKLIYIAIDGVAPK 69
Query: 114 AKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCILPPE 173
AKMNQ R+RRFR +KE E + + E
Sbjct: 70 AKMNQ-------------------QRTRRFRGAKEVYE--------------NNIVYLDE 96
Query: 174 KEKGSH------FDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
EK + FD N ITPGT FM L + I +L+ DP W VI S+ VP
Sbjct: 97 HEKYDNPYLEVAFDHNAITPGTIFMEQLDEFISNLIQFKLSTDPLWANKTVIYSNYKVP 155
>gi|300121215|emb|CBK21596.2| unnamed protein product [Blastocystis hominis]
Length = 938
Score = 102 bits (255), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 87/175 (49%), Gaps = 39/175 (22%)
Query: 54 DNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVA-IFECIDRLFRIVRPRKLLYMAIDGVAP 112
D LYLD+NGIIH TH E +M+ + +F I +F ++PRKL+++A+DGVAP
Sbjct: 31 DYLYLDVNGIIHNATHGESAIGEIPTTDMVASYVFGYISDIFANIQPRKLMFIAVDGVAP 90
Query: 113 RAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI-LP 171
RAK+NQ RSRR+R + D C+ +
Sbjct: 91 RAKLNQ-------------------QRSRRYRTA------------------LDRCLEVE 113
Query: 172 PEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
KG FDSNCITPGT FM + + Y+I +++ DP W+ V+ S + P
Sbjct: 114 STGHKGEVFDSNCITPGTEFMHKVDQLIEYFIRKKISEDPLWRNTMVLYSSHSDP 168
>gi|336373302|gb|EGO01640.1| hypothetical protein SERLA73DRAFT_132069 [Serpula lacrymans var.
lacrymans S7.3]
Length = 70
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 62/89 (69%), Gaps = 19/89 (21%)
Query: 60 MNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQP 119
MNGI+HPCTHP++KPAP+ E+EMMV IF +R+ +VRPRK+L+MAIDGVAPRAKMNQ
Sbjct: 1 MNGIVHPCTHPDNKPAPETEEEMMVDIFSYTERVVNMVRPRKVLFMAIDGVAPRAKMNQ- 59
Query: 120 LTVYSVLYDRGNYSTWQLMRSRRFRASKE 148
RSRRFR+++E
Sbjct: 60 ------------------QRSRRFRSAQE 70
>gi|145507546|ref|XP_001439728.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124406923|emb|CAK72331.1| unnamed protein product [Paramecium tetraurelia]
Length = 214
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 93/185 (50%), Gaps = 41/185 (22%)
Query: 49 NGMEFDNLYLDMNGIIHPCTHPEDK--PAPKDEDEMMVAIFECIDRLFRIV----RPRKL 102
N + DNLYLDMNGIIHPC+HP+ P P D+M V +F IDRL I+ P ++
Sbjct: 32 NNPDIDNLYLDMNGIIHPCSHPDQGGIPIPVTYDDMFVNVFHYIDRLVDIMVLPQEPNQI 91
Query: 103 LYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEV-ARIRE 161
+D P+ FR + E E+ A+IR
Sbjct: 92 SKEVVDLEQPKNPF-------------------------EFRKKRNVYEITGELKAQIRT 126
Query: 162 KLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILS 221
L + I EK +FDSN ITPGT FM L+ L YYI+DR+NN+P ++ + +I +
Sbjct: 127 --LQNTYI---EK----NFDSNQITPGTEFMQKLNIALQYYIYDRMNNNPLFRNVLIIFN 177
Query: 222 DANVP 226
D+++P
Sbjct: 178 DSSIP 182
>gi|302828800|ref|XP_002945967.1| hypothetical protein VOLCADRAFT_115887 [Volvox carteri f.
nagariensis]
gi|300268782|gb|EFJ52962.1| hypothetical protein VOLCADRAFT_115887 [Volvox carteri f.
nagariensis]
Length = 229
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 83/176 (47%), Gaps = 59/176 (33%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGV 110
E DNLYLDMNGIIH CTH K E++MM+ +F+ +++L +IVRP+KLL+MAIDGV
Sbjct: 29 EIDNLYLDMNGIIHNCTHANRKDVGNVTEEDMMLKVFDYLEKLIQIVRPQKLLFMAIDGV 88
Query: 111 APRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCIL 170
APRAKMNQ RSRRF+++ E +
Sbjct: 89 APRAKMNQ-------------------QRSRRFKSAMERLK------------------- 110
Query: 171 PPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
FMA L L ++I ++ DP W+ V+ S VP
Sbjct: 111 --------------------FMARLGKHLRFFIRRKMAEDPLWQKPTVVFSGHEVP 146
>gi|401828471|ref|XP_003887949.1| 5'-3' exonuclease [Encephalitozoon hellem ATCC 50504]
gi|392998957|gb|AFM98968.1| 5'-3' exonuclease [Encephalitozoon hellem ATCC 50504]
Length = 656
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 92/207 (44%), Gaps = 57/207 (27%)
Query: 54 DNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPR 113
D LYLD N IIH C P + E ++ + + ID + VRPRKLLY+AIDGVAPR
Sbjct: 28 DCLYLDFNAIIHTCIKPGLGSEEEIEKDLYKTVGDFIDYILLKVRPRKLLYIAIDGVAPR 87
Query: 114 AKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCILPPE 173
AK++ R+RR++++ E A I+ L D + PP+
Sbjct: 88 AKLSH-------------------QRARRYKSALGKKEGSA----IKPTLQTDFAVQPPK 124
Query: 174 KEK----------------------------------GSHFDSNCITPGTPFMACLSACL 199
+ K FD NCITPGTPFM L + L
Sbjct: 125 EGKDEGEDGEFTGESSLYDKFTAEDISESSSLAVDVEAEKFDLNCITPGTPFMERLHSVL 184
Query: 200 HYYIHDRLNNDPGWKGIKVILSDANVP 226
YI +L++DPG +++I S VP
Sbjct: 185 ISYIQYKLSSDPGASHLRIIYSSYLVP 211
>gi|356533625|ref|XP_003535362.1| PREDICTED: 5'-3' exoribonuclease 3-like [Glycine max]
Length = 351
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/119 (48%), Positives = 74/119 (62%), Gaps = 20/119 (16%)
Query: 74 PAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYS 133
PAP D++ +IF+ ID L+ +VRPRKLLY+AIDGVAPRAKMNQ
Sbjct: 121 PAPATYDDVFKSIFDYIDHLYSLVRPRKLLYLAIDGVAPRAKMNQ--------------- 165
Query: 134 TWQLMRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFM 192
RSRRFR +K+ AE AE R+R+K +++G +L K+K DSN ITPGT FM
Sbjct: 166 ----QRSRRFRTAKDVAEAEAEEERLRKKFMSEGKVL-SSKDKPETSDSNVITPGTQFM 219
>gi|449689746|ref|XP_004212130.1| PREDICTED: 5'-3' exoribonuclease 1-like, partial [Hydra
magnipapillata]
Length = 512
Score = 96.7 bits (239), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 70/134 (52%), Gaps = 30/134 (22%)
Query: 93 LFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEK 152
LFRI++P+K +MA+DG APRAKMNQ RSRRFR +KE
Sbjct: 45 LFRIIKPKKNFFMAVDGCAPRAKMNQ-------------------QRSRRFRTAKEVGIS 85
Query: 153 IAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPG 212
I E + G LP KG FDSNCITPGT FM L L Y+I+ +++ DP
Sbjct: 86 I-------ENAIQRGETLP----KGDSFDSNCITPGTEFMDRLHQQLKYFINYKISTDPL 134
Query: 213 WKGIKVILSDANVP 226
WK V S NVP
Sbjct: 135 WKHCVVHFSGHNVP 148
>gi|402576527|gb|EJW70485.1| hypothetical protein WUBG_18607 [Wuchereria bancrofti]
Length = 81
Score = 96.7 bits (239), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 53/90 (58%), Positives = 60/90 (66%), Gaps = 19/90 (21%)
Query: 86 IFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRA 145
IFE IDRLF IVRPRKLLYMAIDGVAPRAKMNQ RSRRFRA
Sbjct: 3 IFEYIDRLFAIVRPRKLLYMAIDGVAPRAKMNQ-------------------QRSRRFRA 43
Query: 146 SKETAEKIAEVARIREKLLADGCILPPEKE 175
SKE EK+ ++A IR +L ++G LPPEK+
Sbjct: 44 SKEAIEKVEQIAEIRSRLESEGYPLPPEKK 73
>gi|68067452|ref|XP_675691.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56495020|emb|CAH99326.1| hypothetical protein PB000181.03.0 [Plasmodium berghei]
Length = 167
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/125 (42%), Positives = 72/125 (57%), Gaps = 20/125 (16%)
Query: 47 NPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMA 106
N NG FDN+YLDMNGIIH C+H + K ++E+ + IF I+RLF I+ P+KLLYMA
Sbjct: 63 NVNGY-FDNMYLDMNGIIHLCSHGDGSKKVKTDEEIFLNIFLYIERLFDIIEPQKLLYMA 121
Query: 107 IDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLAD 166
IDGVAP+AKMNQ RSRRF++ + + +R K L++
Sbjct: 122 IDGVAPKAKMNQQ-------------------RSRRFKSILASEIEKRAYIELRNKFLSE 162
Query: 167 GCILP 171
+P
Sbjct: 163 NRNVP 167
>gi|384249414|gb|EIE22896.1| single-stranded RNA 5, partial [Coccomyxa subellipsoidea C-169]
Length = 167
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/163 (39%), Positives = 82/163 (50%), Gaps = 37/163 (22%)
Query: 54 DNLYLDMNGIIHPCTHPEDKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAP 112
DNLY+DMN +IH CTHP + P E+EM + + +D LF RPR+L +A+DGVAP
Sbjct: 37 DNLYIDMNHVIHACTHPSWRCTPYLSEEEMFLDMQIYLDHLFNTARPRRLFMVAMDGVAP 96
Query: 113 RAKMNQPLTVYSVLYDRGNYSTWQLMRSRR-FRASKETAEKIAEV-ARIREKLLADGCIL 170
+AKMNQ R+RR F A +E K E+ ARI E L
Sbjct: 97 QAKMNQ-------------------QRTRRFFSAYREELSKELEIEARIPE--------L 129
Query: 171 PPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGW 213
P FD N ITP T FMA L+ L + +L DP W
Sbjct: 130 P-------SFDGNVITPSTAFMARLAGMLRAFFAAKLGADPCW 165
>gi|196007658|ref|XP_002113695.1| hypothetical protein TRIADDRAFT_26537 [Trichoplax adhaerens]
gi|190584099|gb|EDV24169.1| hypothetical protein TRIADDRAFT_26537 [Trichoplax adhaerens]
Length = 142
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/95 (52%), Positives = 62/95 (65%), Gaps = 21/95 (22%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+HP+D A E+++ + IF I+ LFRI++PRK+L+MAIDG
Sbjct: 28 EFDNLYLDMNGIIHNCSHPDDANAHFRISEEKIFLDIFSYIEVLFRIIKPRKVLFMAIDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFR 144
+APRAKMNQ RSRRFR
Sbjct: 88 IAPRAKMNQQ-------------------RSRRFR 103
>gi|323455278|gb|EGB11147.1| hypothetical protein AURANDRAFT_22633 [Aureococcus anophagefferens]
Length = 356
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 93/178 (52%), Gaps = 31/178 (17%)
Query: 51 MEFDNLYLDMNGIIHPCTHPEDKPA--PKDEDEMMVAIFECIDRLFRIVRPRKLLYMAID 108
++ +NLY+D NG++HPC HPE A P E+EM+ + +DRL RP KL+Y+A+D
Sbjct: 22 VQVENLYVDCNGVVHPCCHPEGPGAVQPATEEEMLDNVGAYLDRLVAAARPTKLVYLALD 81
Query: 109 GVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGC 168
GVAPRAKMNQ R+RRF +++E E A +LLA
Sbjct: 82 GVAPRAKMNQ-------------------QRTRRFCSAREADEAAAAT----RELLARRG 118
Query: 169 ILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
P K + +D N ITPGT FMA L+A + + P + VI+SDA P
Sbjct: 119 HRPAAKAR---WDHNAITPGTEFMAKLAAFCRRWAESLVARCP---QLSVIVSDAATP 170
>gi|291236957|ref|XP_002738405.1| PREDICTED: C. briggsae CBR-XRN-2 protein-like [Saccoglossus
kowalevskii]
Length = 1810
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/154 (40%), Positives = 79/154 (51%), Gaps = 24/154 (15%)
Query: 74 PAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYS 133
P P +E+E + + ID L IVRP+K+LY+A+DGV P AK N
Sbjct: 40 PLPINEEEKFEGMSKFIDMLMEIVRPKKMLYIAVDGVTPFAKNNS--------------- 84
Query: 134 TWQLMRSRRFRASKETAEKIAEVARI-REKLLADGCILPPEKEKGSHFDSNCITPGTPFM 192
RSRRF + KE E+ I EK ++ E E F+ N I PGT FM
Sbjct: 85 ----RRSRRFLSDKEERMSDTELDLIWHEKGFSESESSADELE----FNRNLICPGTKFM 136
Query: 193 ACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
+ L LH YI +++N P W GIKVILSDA VP
Sbjct: 137 SRLHVHLHEYIANKINTQPSWVGIKVILSDATVP 170
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 75/153 (49%), Gaps = 33/153 (21%)
Query: 74 PAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYS 133
P P E+E + + ID L IVRP+K+L++A++GV P AK N
Sbjct: 1048 PLPISEEEKFEGMSKFIDTLMEIVRPKKMLFIAMEGVTPFAKNNN--------------- 1092
Query: 134 TWQLMRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMA 193
R ++F K+ E A + E+ AD E G FD N + PGT FM+
Sbjct: 1093 ----RRQKKFLNYKKDREAEAGI----ERRSAD--------EFG--FDYNSLCPGTDFMS 1134
Query: 194 CLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
L L YI DR+ P W GIKVILSDA+VP
Sbjct: 1135 RLHVHLRAYIADRIRTQPRWVGIKVILSDASVP 1167
>gi|440792617|gb|ELR13826.1| exoribonuclease, putative [Acanthamoeba castellanii str. Neff]
Length = 1110
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 65/88 (73%), Gaps = 1/88 (1%)
Query: 139 RSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSAC 198
RSRRF+A KE+ EK + A I ++++ G +PP KE HFDSN ITPGTPFMA ++
Sbjct: 5 RSRRFKAIKESKEKAEKEAEIVQEMIRMGKEIPP-KEDKPHFDSNTITPGTPFMAKVAQS 63
Query: 199 LHYYIHDRLNNDPGWKGIKVILSDANVP 226
L YYI +RL DPGWKGIKVILSDA+VP
Sbjct: 64 LQYYIKERLLTDPGWKGIKVILSDASVP 91
>gi|74184155|dbj|BAE37081.1| unnamed protein product [Mus musculus]
Length = 109
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/100 (48%), Positives = 61/100 (61%), Gaps = 21/100 (21%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGIIH C+HP D +D++ IF ++ LFRI++PRK+ +MA+DG
Sbjct: 28 EFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKET 149
VAPRAKMNQ R RRFR++KE
Sbjct: 88 VAPRAKMNQ-------------------QRGRRFRSAKEA 108
>gi|367037641|ref|XP_003649201.1| hypothetical protein THITE_40223, partial [Thielavia terrestris
NRRL 8126]
gi|346996462|gb|AEO62865.1| hypothetical protein THITE_40223, partial [Thielavia terrestris
NRRL 8126]
Length = 120
Score = 93.2 bits (230), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 72/131 (54%), Gaps = 32/131 (24%)
Query: 58 LDMNGIIHPCTHPE--DKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAK 115
LDMNGIIH CTH + D E+EM +AIF I+ LF ++P+KL +MA+DGVAPRAK
Sbjct: 1 LDMNGIIHNCTHKDSDDVHFRLSEEEMFIAIFNYIEHLFGKIKPKKLFFMAVDGVAPRAK 60
Query: 116 MNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKE 175
MNQ R+RRFR + + R REK + +G LP E+
Sbjct: 61 MNQ-------------------QRARRFRTA-------LDAERAREKAIREGKELPKEEP 94
Query: 176 KGSHFDSNCIT 186
FDSNCIT
Sbjct: 95 ----FDSNCIT 101
>gi|444523968|gb|ELV13670.1| 5'-3' exoribonuclease 1 [Tupaia chinensis]
Length = 592
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 67/116 (57%), Gaps = 23/116 (19%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EF NLYLDMNGIIH C+HP D +D++ IF ++ LFRI++PRK+ +MA+DG
Sbjct: 28 EFANLYLDMNGIIHQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFR--ASKETAEKIAEVARIREKL 163
VAPRAKMNQ R RRFR A +ET + ++ +RE +
Sbjct: 88 VAPRAKMNQ-------------------QRGRRFRVCAPEETTFHLLHLSLMREYI 124
>gi|303390661|ref|XP_003073561.1| 5-3 exoribonuclease [Encephalitozoon intestinalis ATCC 50506]
gi|303302708|gb|ADM12201.1| 5-3 exoribonuclease [Encephalitozoon intestinalis ATCC 50506]
Length = 656
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 87/203 (42%), Gaps = 49/203 (24%)
Query: 54 DNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPR 113
D LYLD N IIH C P + E ++ + + ID + RPRKLLY+AIDGVAPR
Sbjct: 28 DCLYLDFNAIIHTCIKPGLGSEEEIERDLYKTVGDFIDYILLRTRPRKLLYIAIDGVAPR 87
Query: 114 AKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRAS----------------------KETAE 151
AK++ R+RR++++ E E
Sbjct: 88 AKLSH-------------------QRARRYKSALGKKEGKAPVSTGKTDPTASSISEKTE 128
Query: 152 KIAEVARIREKLLADGCILPPEKEKGS--------HFDSNCITPGTPFMACLSACLHYYI 203
+ +V E L D I E S FD NCITPGTPFM L L YI
Sbjct: 129 EATDVEFTGESSLYDKFIAEDLSESSSLAMDVEAEKFDLNCITPGTPFMERLHNVLISYI 188
Query: 204 HDRLNNDPGWKGIKVILSDANVP 226
+L+ DP +++I S VP
Sbjct: 189 QYKLSKDPEVSHLRIIYSSYLVP 211
>gi|429962361|gb|ELA41905.1| hypothetical protein VICG_01089 [Vittaforma corneae ATCC 50505]
Length = 630
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 96/200 (48%), Gaps = 19/200 (9%)
Query: 37 QKIPFDSSKPNPNGMEF-DNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFR 95
Q+ P KPN DNLYLD N IIHPC + + + E+ + + +D +
Sbjct: 12 QRYPEVKLKPNREEDHLTDNLYLDFNAIIHPCCNKALENMADTDTELYKNLEKYMDEVIA 71
Query: 96 IVRPRKLLYMAIDGVAPRAKMNQPLTVYSV----LYDRGNYSTW-----QLMRSRRFRAS 146
+RPR+LLY+++DGVAPRAK+NQ + V + ++GN+ + R
Sbjct: 72 RIRPRRLLYISVDGVAPRAKLNQQRSRRFVHAREVSEQGNFYFKDDCGNEPAHHSRLTVL 131
Query: 147 KETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDR 206
+ E A + ++ +GC + FD+N I+PGT FM L A L I +
Sbjct: 132 DQEIENSAVSKNMSDEATPNGCGV---------FDTNAISPGTEFMQRLDAFLQELISFK 182
Query: 207 LNNDPGWKGIKVILSDANVP 226
++ D W G VI S VP
Sbjct: 183 MSFDQRWTGFNVIYSSYRVP 202
>gi|241602466|ref|XP_002405190.1| pacman protein, putative [Ixodes scapularis]
gi|215500574|gb|EEC10068.1| pacman protein, putative [Ixodes scapularis]
Length = 1112
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 72/131 (54%), Gaps = 30/131 (22%)
Query: 96 IVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAE 155
+++PRK +MA+DGVAPRAKMNQ R RRFR++KE
Sbjct: 1 MIKPRKTFFMAVDGVAPRAKMNQ-------------------QRGRRFRSAKEALA---- 37
Query: 156 VARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKG 215
+ ++ L+ G +LP E + FDSNCI+PGT FMA L L ++ ++++DP W+
Sbjct: 38 ---LEKQALSRGEVLPTE----ARFDSNCISPGTSFMANLQEQLEQFVAMKISSDPLWQE 90
Query: 216 IKVILSDANVP 226
+KV LS P
Sbjct: 91 VKVYLSGHQTP 101
>gi|219111223|ref|XP_002177363.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411898|gb|EEC51826.1| predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]
Length = 156
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 71/134 (52%), Gaps = 38/134 (28%)
Query: 96 IVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAE 155
IV+P+ +YMAIDGVAPRAK+NQ RSRRFR++ + AE +
Sbjct: 1 IVKPKVSVYMAIDGVAPRAKLNQ-------------------QRSRRFRSAMDMAEATKD 41
Query: 156 VARIREKLLADGCILPPEKEKGSH---FDSNCITPGTPFMACLSACLHYYIHDRLNNDPG 212
+ + EKG+ FDSNCITPGT F+A +S + Y+I ++ DP
Sbjct: 42 L----------------KDEKGNQREVFDSNCITPGTEFLAKVSNTIQYFIRKKIKEDPS 85
Query: 213 WKGIKVILSDANVP 226
W G+ VI S +VP
Sbjct: 86 WHGLTVIFSGHDVP 99
>gi|449330168|gb|AGE96430.1| ribonucleic trafficking protein 1 [Encephalitozoon cuniculi]
Length = 655
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 88/203 (43%), Gaps = 49/203 (24%)
Query: 54 DNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPR 113
D LYLD N IIH C P + E ++ + + ID + RPRKLLY+A+DGVAPR
Sbjct: 28 DALYLDFNAIIHTCIKPGLGSEEEIERDLYKTVGDFIDHILLKTRPRKLLYIAVDGVAPR 87
Query: 114 AKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIR------------- 160
AK++ R+RR++++ E A +A +
Sbjct: 88 AKLSH-------------------QRARRYKSALGKKEGSAVIAAAKTDPTMSSPSEKKD 128
Query: 161 ---------EKLLADGCILPPEKEKGS--------HFDSNCITPGTPFMACLSACLHYYI 203
E L D I E S FD NCITPGTPFM L L YI
Sbjct: 129 EIPNEEFTGESSLYDKFIAEDPSESSSLAIDVETEKFDLNCITPGTPFMERLHKVLISYI 188
Query: 204 HDRLNNDPGWKGIKVILSDANVP 226
+L++DP +++I S VP
Sbjct: 189 QCKLSSDPEVSNLRIIYSSYLVP 211
>gi|85014269|ref|XP_955630.1| 5-3 exoribonuclease [Encephalitozoon cuniculi GB-M1]
gi|19171324|emb|CAD27049.1| RIBONUCLEIC TRAFFICKING PROTEIN 1 (5'3'exoribonuclease)
[Encephalitozoon cuniculi GB-M1]
Length = 655
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 88/203 (43%), Gaps = 49/203 (24%)
Query: 54 DNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPR 113
D LYLD N IIH C P + E ++ + + ID + RPRKLLY+A+DGVAPR
Sbjct: 28 DALYLDFNAIIHTCIKPGLGSEEEIERDLYKTVGDFIDHILLKTRPRKLLYIAVDGVAPR 87
Query: 114 AKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIR------------- 160
AK++ R+RR++++ E A +A +
Sbjct: 88 AKLSH-------------------QRARRYKSALGKKEGSAVIAAAKADPTMSSPSEKKD 128
Query: 161 ---------EKLLADGCILPPEKEKGS--------HFDSNCITPGTPFMACLSACLHYYI 203
E L D I E S FD NCITPGTPFM L L YI
Sbjct: 129 EIPNEEFTGESSLYDKFIAEDPSESSSLAIDVETEKFDLNCITPGTPFMERLHKVLISYI 188
Query: 204 HDRLNNDPGWKGIKVILSDANVP 226
+L++DP +++I S VP
Sbjct: 189 QCKLSSDPEVSNLRIIYSSYLVP 211
>gi|427788379|gb|JAA59641.1| Putative 5'-3' exonuclease hke1/rat1 [Rhipicephalus pulchellus]
Length = 1628
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 73/132 (55%), Gaps = 32/132 (24%)
Query: 96 IVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAE 155
+++P+K +MA+DGVAPRAKMNQ R RRF+++KE
Sbjct: 1 MIKPKKTFFMAVDGVAPRAKMNQ-------------------QRGRRFKSAKE------- 34
Query: 156 VARIREKLLAD-GCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWK 214
A+ +EK D G +LP E+ FDSNCI+PGT FMA L L ++ +++ DP W+
Sbjct: 35 -AQAQEKEARDRGEVLPTEE----RFDSNCISPGTEFMARLQDQLQQFVATKVSTDPLWR 89
Query: 215 GIKVILSDANVP 226
G+KV LS P
Sbjct: 90 GVKVYLSGHQTP 101
>gi|427780147|gb|JAA55525.1| Putative 5'-3' exonuclease hke1/rat1 [Rhipicephalus pulchellus]
Length = 1163
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 72/131 (54%), Gaps = 30/131 (22%)
Query: 96 IVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAE 155
+++P+K +MA+DGVAPRAKMNQ R RRF+++KE + E
Sbjct: 1 MIKPKKTFFMAVDGVAPRAKMNQ-------------------QRGRRFKSAKEAQAQEKE 41
Query: 156 VARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKG 215
AR R G +LP E+ FDSNCI+PGT FMA L L ++ +++ DP W+G
Sbjct: 42 -ARDR------GEVLPTEER----FDSNCISPGTEFMARLQDQLQQFVATKVSTDPLWRG 90
Query: 216 IKVILSDANVP 226
+KV LS P
Sbjct: 91 VKVYLSGHQTP 101
>gi|340506425|gb|EGR32559.1| hypothetical protein IMG5_077960 [Ichthyophthirius multifiliis]
Length = 1187
Score = 90.9 bits (224), Expect = 3e-16, Method: Composition-based stats.
Identities = 58/178 (32%), Positives = 86/178 (48%), Gaps = 36/178 (20%)
Query: 54 DNLYLDMNGIIHPCTHPEDKP-----APKDEDEMMVAIFECIDRLFRIVRPRKLLYMAID 108
D YLDMNG+I+ CT ED K+ E+ IF ID + +V+P+K+LY+ +D
Sbjct: 31 DCFYLDMNGLIYKCTKEEDTVFKDLLLQKNMQEIFTLIFNYIDEMVNLVQPKKVLYLFLD 90
Query: 109 GVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGC 168
G APRAK NQ R+RRF ++K + + L C
Sbjct: 91 GPAPRAKQNQ-------------------QRTRRFLSAKSHKD-------LNNSL--KNC 122
Query: 169 ILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
+ E + +N I+ GT FM L+ + +YI ++ DP WK ++V S +NVP
Sbjct: 123 GILAENQT---MQNNAISTGTTFMHELNQQIQFYIKNKFKQDPQWKNLEVFFSGSNVP 177
>gi|307109532|gb|EFN57770.1| hypothetical protein CHLNCDRAFT_143098, partial [Chlorella
variabilis]
Length = 234
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/133 (41%), Positives = 71/133 (53%), Gaps = 33/133 (24%)
Query: 61 NGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPR----KLLYMAIDGVAPRAKM 116
NGIIH CTH + E+EM++ IF +D+LF IV+P+ KLL+MAIDG APRAKM
Sbjct: 75 NGIIHNCTHGNNPDVRLTEEEMILKIFTYLDKLFHIVKPQAGGGKLLFMAIDGSAPRAKM 134
Query: 117 NQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEK 176
NQ R+RRF++++E E + R E P E
Sbjct: 135 NQ-------------------QRARRFKSAREAQEAMEAAVRRGE----------PVPEP 165
Query: 177 GSHFDSNCITPGT 189
+ FDSNCITPGT
Sbjct: 166 DARFDSNCITPGT 178
>gi|195164006|ref|XP_002022840.1| GL14782 [Drosophila persimilis]
gi|194104863|gb|EDW26906.1| GL14782 [Drosophila persimilis]
Length = 1039
Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/97 (45%), Positives = 61/97 (62%), Gaps = 21/97 (21%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
EFDNLYLDMNGI+H C+HP+D +E ++ IF +D+LF +++P+KL ++A+DG
Sbjct: 28 EFDNLYLDMNGIVHNCSHPDDNNIHFHLEEQQIFQDIFNYVDKLFYLIKPQKLFFLAVDG 87
Query: 110 VAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRAS 146
VAPRAKMNQ RSRRFR++
Sbjct: 88 VAPRAKMNQ-------------------QRSRRFRSA 105
>gi|71407725|ref|XP_806311.1| 5'-3' exonuclease XRNB [Trypanosoma cruzi strain CL Brener]
gi|70870021|gb|EAN84460.1| 5'-3' exonuclease XRNB, putative [Trypanosoma cruzi]
Length = 979
Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 98/230 (42%), Gaps = 66/230 (28%)
Query: 56 LYLDMNGIIHPCTHPEDKP--APKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPR 113
LY+D+NG+IHPC H E P A + E+E + I ++ L VRP +LY+A DGVAPR
Sbjct: 29 LYIDLNGLIHPCCHSERDPSVAARPEEEKLQCICCEVEVLLATVRPHDILYIATDGVAPR 88
Query: 114 AKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRAS--------KETAEKIAEVARIREKLLA 165
AKMNQ R S ++M S E AE ++ IR+ L+
Sbjct: 89 AKMNQQRA-------RRYMSRAKIMSSGTEVVEEVVREFTPNEMAEADDDLDDIRQLLMQ 141
Query: 166 DGC--------------------------ILPPEKEKGSH---------FD--------- 181
D + P + +H FD
Sbjct: 142 DALYGGVMVQDDTTETLNGVANIADSLTPVTPCHDKSNNHEAHAETWAAFDGLTDGTMEV 201
Query: 182 ----SNCITPGTPFMACLSACLHYYIHDRLNN-DPGWKGIKVILSDANVP 226
SNCI+PGT FM ++ + + D+L N DP W G++V+ S AN P
Sbjct: 202 TEFDSNCISPGTAFMVKVTNAILTMVQDKLTNGDPLWAGLRVVFSGANTP 251
>gi|294884783|gb|ADF47407.1| exoribonuclease-2, partial [Dugesia japonica]
Length = 801
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/57 (66%), Positives = 45/57 (78%)
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LP K HFDSNCITPGTPFMA L+ L YY++++LN+DPGWK I+VILSDAN P
Sbjct: 3 LPEPKSASEHFDSNCITPGTPFMARLTIALQYYVYNKLNSDPGWKNIQVILSDANAP 59
>gi|343424057|emb|CCD17964.1| 5'-3' exonuclease, putative [Trypanosoma vivax Y486]
Length = 996
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 98/210 (46%), Gaps = 39/210 (18%)
Query: 56 LYLDMNGIIHPCTHPEDKP--APKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPR 113
LY+D+NG+IHPC H E+ P A E E + I ++ L VRP+++LY+A+DGVAPR
Sbjct: 29 LYVDLNGLIHPCCHSENDPSIALLPEGEKLECICYEVELLVETVRPQEVLYIAVDGVAPR 88
Query: 114 AKMNQPLT---VYSVLYDRGNYSTWQLMRSRRFR------------ASKETAEKIAEVAR 158
AKMNQ + + R + S + ++ R S E AE ++
Sbjct: 89 AKMNQQRARRYMSRAVPARADKSPSRASHAKNNRCADVVEEVVREFTSDEIAEANNDLNE 148
Query: 159 IREKLLADG---------------CILPPEKEKGS------HFDSNCITPGTPFMACLS- 196
+R LL D + P + + FDSNCI+PGT FM+ ++
Sbjct: 149 VRNLLLQDSLYGQPVPDASVGGNTTVFVPRSDTSTADISAVEFDSNCISPGTAFMSKVAD 208
Query: 197 ACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
L + ++D W + VI SD+ P
Sbjct: 209 KVLAMLQRNMTSDDSKWSRLCVIFSDSRTP 238
>gi|67466759|ref|XP_649521.1| 5'-3' exonuclease domain containing protein [Entamoeba histolytica
HM-1:IMSS]
gi|56465985|gb|EAL44135.1| 5'-3' exonuclease domain containing protein [Entamoeba histolytica
HM-1:IMSS]
gi|449704666|gb|EMD44867.1| 5'3' exonuclease domain containing protein [Entamoeba histolytica
KU27]
Length = 628
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 87/192 (45%), Gaps = 59/192 (30%)
Query: 37 QKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRI 96
++ D ++ NPNG EFDNLY+D+NG+IH DK +E++ I + R+ I
Sbjct: 23 EQFDIDLTRNNPNGREFDNLYIDVNGLIHSSI---DKQTI---EEVIEHIQNQLMRIIMI 76
Query: 97 VRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEV 156
VRPR LLY+AIDGV P AKM Q R RRF
Sbjct: 77 VRPRNLLYIAIDGVCPIAKMIQ-------------------QRKRRFTTD---------- 107
Query: 157 ARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND--PGWK 214
C+ + N ITPGT M +S + +I +++NN W+
Sbjct: 108 -----------CL-----------EGNAITPGTELMEKISVGIESFILNQMNNKGLDYWR 145
Query: 215 GIKVILSDANVP 226
IKVI+S +VP
Sbjct: 146 RIKVIVSGVHVP 157
>gi|444520441|gb|ELV12993.1| 5'-3' exoribonuclease 2 [Tupaia chinensis]
Length = 669
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Query: 151 EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
E E R+RE++LA G LPPE+ K FDSNCITPGT FM L+ CL YYI DRLNND
Sbjct: 2 EAAVEKQRVREEILAKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIADRLNND 60
Query: 211 PGWKGI 216
PGWK +
Sbjct: 61 PGWKNL 66
>gi|118388580|ref|XP_001027386.1| XRN 5'-3' exonuclease N-terminus family protein [Tetrahymena
thermophila]
gi|89309156|gb|EAS07144.1| XRN 5'-3' exonuclease N-terminus family protein [Tetrahymena
thermophila SB210]
Length = 1793
Score = 87.0 bits (214), Expect = 5e-15, Method: Composition-based stats.
Identities = 56/178 (31%), Positives = 85/178 (47%), Gaps = 36/178 (20%)
Query: 54 DNLYLDMNGIIHPCTHPE-----DKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAID 108
D YLDMNGII+ C+ E D ++ E+ IF ID + +V P+K+LY+ +D
Sbjct: 30 DCFYLDMNGIIYKCSKDEGTVFKDLLLQRNIQEIFSMIFNYIDEMVNLVEPKKVLYLFLD 89
Query: 109 GVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGC 168
G PRAK NQ R+RRF++++ + + + L G
Sbjct: 90 GPCPRAKQNQ-------------------QRTRRFQSAQSWKD-------LNDSLRNCGF 123
Query: 169 ILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
+ +G +N I+ GT FM L+ LH+YI + DP W ++V S +NVP
Sbjct: 124 L-----SEGETMKNNSISTGTEFMHDLNKQLHFYICKKFEQDPRWSNLEVFFSGSNVP 176
>gi|407040580|gb|EKE40208.1| 5'-3' exonuclease domain containing protein [Entamoeba nuttalli
P19]
Length = 628
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 85/187 (45%), Gaps = 59/187 (31%)
Query: 42 DSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRK 101
D ++ NPNG EFDNLY+D+NG+IH DK +E++ I + R+ IVRPR
Sbjct: 28 DLTRNNPNGREFDNLYIDVNGLIHSSI---DKQTI---EEVIEHIQNQLMRIIMIVRPRN 81
Query: 102 LLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIRE 161
LLY+AIDGV P AKM Q R RRF
Sbjct: 82 LLYIAIDGVCPIAKMIQ-------------------QRKRRFTTD--------------- 107
Query: 162 KLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND--PGWKGIKVI 219
C+ + N ITPGT M +S + +I +++NN W+ IKVI
Sbjct: 108 ------CL-----------EGNAITPGTELMEKISVGIESFILNQMNNKGLDYWRRIKVI 150
Query: 220 LSDANVP 226
+S +VP
Sbjct: 151 VSGVHVP 157
>gi|167379332|ref|XP_001735097.1| 5'->3' exoribonuclease [Entamoeba dispar SAW760]
gi|165903060|gb|EDR28720.1| 5'->3' exoribonuclease, putative [Entamoeba dispar SAW760]
Length = 628
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 85/187 (45%), Gaps = 59/187 (31%)
Query: 42 DSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRK 101
D ++ NPNG EFDNLY+D+NG+IH DK +E++ I + R+ IVRPR
Sbjct: 28 DLTRNNPNGREFDNLYIDVNGLIHNSI---DKQTI---EEVIEHIQNQLMRIIMIVRPRN 81
Query: 102 LLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIRE 161
LLY+AIDGV P AKM Q R RRF
Sbjct: 82 LLYIAIDGVCPIAKMIQ-------------------QRKRRFTTD--------------- 107
Query: 162 KLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND--PGWKGIKVI 219
C+ + N ITPGT M +S + +I +++NN W+ +KVI
Sbjct: 108 ------CL-----------EGNAITPGTELMEKISTGIESFILNQMNNKGLDYWRRVKVI 150
Query: 220 LSDANVP 226
+S +VP
Sbjct: 151 VSGVHVP 157
>gi|429964640|gb|ELA46638.1| hypothetical protein VCUG_01864 [Vavraia culicis 'floridensis']
Length = 707
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 105/240 (43%), Gaps = 54/240 (22%)
Query: 37 QKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRI 96
+K P K PN D LY+D N IIH P D P P +EDEMM + + ID +
Sbjct: 43 KKYPQVIEKATPNNPT-DVLYIDFNAIIHISCAPSDGPTPVNEDEMMQNVEKNIDSIVSK 101
Query: 97 VRPRKLLYMAIDGVAPRAKMNQPLT-VYSVLYDRGNYS--TWQLMRSRRF-RASKETAEK 152
PRK++ ++ DGVAPRAK+NQ + Y + + S +++ +S F +KE +K
Sbjct: 102 CLPRKMIVISTDGVAPRAKLNQQRSRRYRSIIEALELSKKSFESTKSVNFVEKTKEKIQK 161
Query: 153 IAEVARIREKLLADGCIL-------------------------------PPEKEKGSH-- 179
+A+ + I+++ D L P + E G +
Sbjct: 162 LAKASTIKDEYKVDFVGLMDNSTSDEKNSGADEANGRRKERKCNEENAEPEDVEIGEYDK 221
Query: 180 ----------------FDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDA 223
FD N ITPGT FM L + +I +RL NDP +K + I S+
Sbjct: 222 HASDLLEESSLTEDEAFDKNAITPGTRFMYDLEKRMDQFIRNRLVNDPKYKNLCFIYSNG 281
>gi|323456482|gb|EGB12349.1| hypothetical protein AURANDRAFT_20690, partial [Aureococcus
anophagefferens]
Length = 186
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/145 (39%), Positives = 77/145 (53%), Gaps = 21/145 (14%)
Query: 82 MMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSR 141
M+ I +DRL ++RP +Y A+DGVAPRAKMNQ R+R
Sbjct: 1 MLRRIEAHLDRLMELMRPTAFVYFALDGVAPRAKMNQ-------------------QRTR 41
Query: 142 RFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHY 201
R+ A++E AE A +R++L A G P ++K + +D N ITPGT FM L+ L
Sbjct: 42 RYVAAQERAEAAAAEDALRDELAATG--QPAPEKKAAKWDHNVITPGTEFMRKLADFLRA 99
Query: 202 YIHDRLNNDPGWKGIKVILSDANVP 226
Y R + P WK I +LSDA VP
Sbjct: 100 YCARRARSHPRWKHISFLLSDATVP 124
>gi|156098318|ref|XP_001615191.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148804065|gb|EDL45464.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 587
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 82/181 (45%), Gaps = 43/181 (23%)
Query: 47 NPNGMEFDNLYLDMNGIIHPCTHPEDKPAP-KDEDEMMVAIFECIDRLFRIVRPRKLLYM 105
N + D Y+DMNG+IH CTH + P DE E++ I + + LF +V+PRKL+Y+
Sbjct: 19 NEGQKDVDIFYVDMNGVIHHCTHANKETLPVHDEHELLTNILKYLKNLFHLVKPRKLVYV 78
Query: 106 AIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLA 165
+DGV+P+AKMNQ R RRF + + ++
Sbjct: 79 GVDGVSPKAKMNQ-------------------QRKRRFLSLFKVSDN------------- 106
Query: 166 DGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANV 225
F+ NCIT GT FM ++ L+ + ++ G VI S ++V
Sbjct: 107 --------SNSAHLFNPNCITTGTDFMYKINLALNKWF--QILKKKGIFPFDVIFSGSDV 156
Query: 226 P 226
P
Sbjct: 157 P 157
>gi|395510147|ref|XP_003759342.1| PREDICTED: 5'-3' exoribonuclease 2-like, partial [Sarcophilus
harrisii]
Length = 273
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/58 (68%), Positives = 44/58 (75%), Gaps = 1/58 (1%)
Query: 169 ILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
LPPE+ K FDSNCITPGT FM L+ CL YYI DRLNNDPGWK + VILSDA+ P
Sbjct: 2 FLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDPGWKNLTVILSDASAP 58
>gi|221055850|ref|XP_002259063.1| 5'-3' exoribonuclease [Plasmodium knowlesi strain H]
gi|193809134|emb|CAQ39836.1| 5'-3' exoribonuclease, putative [Plasmodium knowlesi strain H]
Length = 648
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 75/155 (48%), Gaps = 41/155 (26%)
Query: 47 NPNGMEFDNLYLDMNGIIHPCTHPEDKPAP-KDEDEMMVAIFECIDRLFRIVRPRKLLYM 105
N E D Y+DMNG+IH CTH + P DE E++ I + + LF +V+PRKL+Y+
Sbjct: 84 NDGQKEVDIFYVDMNGVIHHCTHANKETLPVHDEHELLSNILKYLKNLFHLVKPRKLVYV 143
Query: 106 AIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLA 165
+DGV+P+AKMNQ R RRF + + ++ +
Sbjct: 144 GVDGVSPKAKMNQ-------------------QRKRRFLSLFKVSDN------------S 172
Query: 166 DGCILPPEKEKGSHFDSNCITPGTPFMACLSACLH 200
+G L F+ NCIT GT FM ++ L+
Sbjct: 173 NGTNL---------FNPNCITTGTDFMYKINLSLN 198
>gi|449687936|ref|XP_002167193.2| PREDICTED: 5'-3' exoribonuclease 1, partial [Hydra magnipapillata]
Length = 487
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 63/122 (51%), Gaps = 30/122 (24%)
Query: 105 MAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLL 164
MA+DG APRAKMNQ RSRRFR +KE E I K +
Sbjct: 1 MAVDGCAPRAKMNQ-------------------QRSRRFRTAKEAEEAI-------RKAI 34
Query: 165 ADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDAN 224
G LPP+ FDSNCITPGT FM L L Y+++ ++++DP W+ + LS +
Sbjct: 35 QKGQTLPPD----DRFDSNCITPGTEFMWRLQHQLKYFVNQKISSDPLWQECTIYLSGHD 90
Query: 225 VP 226
VP
Sbjct: 91 VP 92
>gi|145552342|ref|XP_001461847.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124429683|emb|CAK94474.1| unnamed protein product [Paramecium tetraurelia]
Length = 351
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 84/178 (47%), Gaps = 36/178 (20%)
Query: 54 DNLYLDMNGIIHPC-THP----EDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAID 108
D YLDMN II+ C T P +D+ +D D++ V+I +D + +V P++LL++A D
Sbjct: 16 DYFYLDMNQIIYKCATDPSVLFKDQLRERDFDDVWVSIINYLDMIINLVNPQQLLFLAFD 75
Query: 109 GVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGC 168
GVAPRAKMNQ R Y + L + F
Sbjct: 76 GVAPRAKMNQQRQRRFQSQKRYKYLSAHLQQIGLF------------------------- 110
Query: 169 ILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
+K + +N +PGT FM L+ + +YI + + DP +K +K+I S +VP
Sbjct: 111 ------QKNETYKNNQFSPGTEFMTQLNQQIKFYIERKYSEDPKFKNLKIIFSGCDVP 162
>gi|389583613|dbj|GAB66347.1| 5'-3' exoribonuclease [Plasmodium cynomolgi strain B]
Length = 638
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 86/183 (46%), Gaps = 47/183 (25%)
Query: 47 NPNGMEFDNLYLDMNGIIHPCTHPEDKPAP-KDEDEMMVAIFECIDRLFRIVRPRKLLYM 105
N E D Y+DMNG+IH CTH + P DE E++ I + + LF +V+P+ L+Y+
Sbjct: 19 NERQKEVDIFYVDMNGVIHHCTHANKETLPVHDEHELLSNILKYLKNLFHLVKPKNLVYV 78
Query: 106 AIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLA 165
+DGV+P+AKMNQ R RRF + + ++ +
Sbjct: 79 GVDGVSPKAKMNQ-------------------QRKRRFLSLFKVSDN------------S 107
Query: 166 DGCILPPEKEKGSHFDSNCITPGTPFMACLSACLH--YYIHDRLNNDPGWKGIKVILSDA 223
+G L F+ NCIT GT FM ++ L+ + I + N P VI S +
Sbjct: 108 NGANL---------FNPNCITTGTDFMYKINLALNKWFQILKKKNIFP----FDVIFSGS 154
Query: 224 NVP 226
+VP
Sbjct: 155 DVP 157
>gi|145515211|ref|XP_001443505.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124410894|emb|CAK76108.1| unnamed protein product [Paramecium tetraurelia]
Length = 1303
Score = 82.4 bits (202), Expect = 1e-13, Method: Composition-based stats.
Identities = 55/178 (30%), Positives = 84/178 (47%), Gaps = 36/178 (20%)
Query: 54 DNLYLDMNGIIHPC-THP----EDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAID 108
D YLDMN II+ C T P +D+ +D D++ V+I +D + +V P++LL++A D
Sbjct: 28 DYFYLDMNQIIYKCATDPTVLFKDQLRERDFDDIWVSILNYLDMIINLVNPQQLLFLAFD 87
Query: 109 GVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGC 168
GVAPRAKMNQ R Y + L + F
Sbjct: 88 GVAPRAKMNQQRQRRFQSQKRYKYLSAHLQQIGLF------------------------- 122
Query: 169 ILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
+K + +N +PGT FM L+ + +YI + + DP +K +K+I S +VP
Sbjct: 123 ------QKNETYKNNQFSPGTEFMTQLNQQIKFYIERKYSEDPKFKNLKIIFSGCDVP 174
>gi|68467492|ref|XP_722179.1| hypothetical protein CaO19.4969 [Candida albicans SC5314]
gi|46444129|gb|EAL03406.1| hypothetical protein CaO19.4969 [Candida albicans SC5314]
Length = 1422
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 64/122 (52%), Gaps = 30/122 (24%)
Query: 105 MAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLL 164
MAIDGVAPRAKMNQ R+RRFR + E AE+ +K +
Sbjct: 1 MAIDGVAPRAKMNQ-------------------QRARRFRTAYE-----AEINL--KKAI 34
Query: 165 ADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDAN 224
+G +P E FDSN ITPGT FMA L+ L Y+IH ++ D W I++ILS
Sbjct: 35 ENGEEIPKE----DPFDSNSITPGTEFMANLTNNLKYFIHKKITEDSSWANIEIILSGHE 90
Query: 225 VP 226
VP
Sbjct: 91 VP 92
>gi|401418979|ref|XP_003873980.1| putative 5'-3' exonuclease [Leishmania mexicana MHOM/GT/2001/U1103]
gi|322490213|emb|CBZ25474.1| putative 5'-3' exonuclease [Leishmania mexicana MHOM/GT/2001/U1103]
Length = 1161
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 110/261 (42%), Gaps = 89/261 (34%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKP--APKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
+ LY+D+NG+IHPC H E P A + ++E + +I I+ L VRP++++Y+AIDG
Sbjct: 25 DVHGLYIDLNGLIHPCCHDEHDPSVALRTQEEKLRSICLAIETLVVTVRPQRVIYIAIDG 84
Query: 110 VAPRAKMNQ-----------PLTVYSVLYDRGNY---STWQLMRSRRF-RASKETAEKIA 154
V PRAK+NQ PLT G++ +T + F +A + E+
Sbjct: 85 VVPRAKLNQQRARRYMSSAVPLTDTDKPTRGGSHKMSATIVAAIEKEFTQAECDGVER-- 142
Query: 155 EVARIREKLLAD----GC---------------------------ILPPEKEKG------ 177
E+A + + L+ D GC L + EKG
Sbjct: 143 ELADVSQALMGDVLYGGCAAMALAEDTTEKAEVHTLAAAPWVTVPTLASQGEKGACCAAA 202
Query: 178 -------------SHFDSNCITPGTPFMACLSACLHYYIHDRL---NNDPG--------- 212
+ FDSNCI+PGT FM ++ + YI +L +D G
Sbjct: 203 AQIGRQPAAAASPAKFDSNCISPGTAFMDAVATAVRDYIRRKLAPKESDGGGEAVAEAGA 262
Query: 213 --------WKGIKVILSDANV 225
W G+ V+ SD+N
Sbjct: 263 SPAATCAHWAGLTVVFSDSNT 283
>gi|238878282|gb|EEQ41920.1| 5'-3' exoribonuclease 1 [Candida albicans WO-1]
Length = 1422
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 64/122 (52%), Gaps = 30/122 (24%)
Query: 105 MAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLL 164
MAIDGVAPRAKMNQ R+RRFR + E AE+ +K +
Sbjct: 1 MAIDGVAPRAKMNQ-------------------QRARRFRTAYE-----AEINL--KKAI 34
Query: 165 ADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDAN 224
+G +P E FDSN ITPGT FMA L+ L Y+IH ++ D W I++ILS
Sbjct: 35 ENGEEIPKE----DPFDSNSITPGTEFMAKLTNNLKYFIHKKITEDSSWANIEIILSGHE 90
Query: 225 VP 226
VP
Sbjct: 91 VP 92
>gi|281201939|gb|EFA76147.1| hypothetical protein PPL_10728 [Polysphondylium pallidum PN500]
Length = 2230
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 91/179 (50%), Gaps = 39/179 (21%)
Query: 51 MEFDNLYLDMNGIIHPCTHPEDKP--APKDEDEM-MVAIFECIDRLFRIVRPRKLLYMAI 107
+ +NLY+DMNG+IH TH ++ +P + D++ + + + +D L V+P LLY+A+
Sbjct: 57 LRLNNLYIDMNGVIHNSTHAKNSTTLSPVESDDVCRMNLLKNLDELVGTVQPTNLLYIAM 116
Query: 108 DGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADG 167
DGV PRAK + R RRFR++K+ + ++ ++L +D
Sbjct: 117 DGVPPRAKAIE-------------------QRKRRFRSAKDAKDALS------KRLPSDP 151
Query: 168 CILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
P FDSNCI+P T FM ++ + Y + P + +++SDA+VP
Sbjct: 152 VFEP--------FDSNCISPATEFMCKVNEWVLTYAQALVKRMP---SVSIVVSDASVP 199
>gi|440492471|gb|ELQ75035.1| 5'-3' exonuclease HKE1/RAT1 [Trachipleistophora hominis]
Length = 606
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 93/218 (42%), Gaps = 48/218 (22%)
Query: 54 DNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPR 113
D LY+D N IIH P D P P +EDEMM I + ID + PRK++ ++ DGVAPR
Sbjct: 28 DILYIDFNAIIHISCTPSDGPTPVNEDEMMNNIEKNIDSIVSKCLPRKMIVISTDGVAPR 87
Query: 114 AKMNQPLT-VYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVAR---IREKLLAD--- 166
AK+NQ Y + + S ++ ++T EKI ++A+ I+++ D
Sbjct: 88 AKLNQQRARRYRSIIEALELSKKSFENTKGANFVEKTKEKIQKLAKTPTIKDEYKVDFVG 147
Query: 167 -----------GCILPPEKEKGSH------------------------------FDSNCI 185
G + EK FD N I
Sbjct: 148 LMENSTSDEKTGVVDETNNEKKEEDNELEDVEIDGFEKHPSDLLEESSLTEDEAFDKNAI 207
Query: 186 TPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDA 223
TPGT FM L + +I +RL N+P +K + I S+
Sbjct: 208 TPGTRFMYDLEKRMDKFIRERLANNPMYKNLCFIYSNG 245
>gi|170105467|ref|XP_001883946.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164641126|gb|EDR05388.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 112
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 54/82 (65%), Gaps = 2/82 (2%)
Query: 39 IPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRI 96
+ +D + P + DNLYLD NGIIH C+ P D+ A E++ +IF +DRLF
Sbjct: 31 VAYDLERAYPMTLLSDNLYLDFNGIIHNCSRPNDEDAHFRLTEEQNNTSIFTYVDRLFGK 90
Query: 97 VRPRKLLYMAIDGVAPRAKMNQ 118
++ +KL +MA+DGVAPRAKMNQ
Sbjct: 91 IKLKKLFFMAVDGVAPRAKMNQ 112
>gi|300706190|ref|XP_002995390.1| hypothetical protein NCER_101741 [Nosema ceranae BRL01]
gi|239604457|gb|EEQ81719.1| hypothetical protein NCER_101741 [Nosema ceranae BRL01]
Length = 616
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 85/179 (47%), Gaps = 26/179 (14%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVA 111
+ D LY+D N IIH C +P K ++M+ + + +D + +PRK+LY+A+DGVA
Sbjct: 25 QVDILYIDYNAIIHNCYNPNLGSLDKIYEDMIDRLTKMVDNIVEKAKPRKILYIAVDGVA 84
Query: 112 PRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETA--EKIAEVARIREKLLADGCI 169
P AK+ R RR++A+ E A + + E +G +
Sbjct: 85 PAAKLAH-------------------QRGRRYKAASEKAGPNGYIDFSSNVEITTQEGAL 125
Query: 170 L--PPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
PP + FDSN ITPGT M L + + LN +P +K +K++ S VP
Sbjct: 126 TSKPP---TANIFDSNSITPGTELMKFLHKNIIDMLIYNLNTNPNYKDLKILYSSYLVP 181
>gi|68070139|ref|XP_676981.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56496914|emb|CAH93788.1| conserved hypothetical protein [Plasmodium berghei]
Length = 635
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 69/147 (46%), Gaps = 41/147 (27%)
Query: 54 DNLYLDMNGIIHPCTHPEDKPAP-KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAP 112
D Y+DMNG+IH CTH P DE E+ I + LF +V+P+KL+Y+ +DGV+P
Sbjct: 65 DIFYIDMNGVIHHCTHANKDALPIHDEHELFSNILHYLKNLFYLVKPQKLVYIGVDGVSP 124
Query: 113 RAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCILPP 172
+AKMNQ R RRF + KI + ++I
Sbjct: 125 KAKMNQ-------------------QRKRRFLS----LFKINDNSKI------------- 148
Query: 173 EKEKGSHFDSNCITPGTPFMACLSACL 199
+ F+ NCIT GT FM ++ L
Sbjct: 149 ----TNLFNPNCITTGTDFMYKINLSL 171
>gi|397617693|gb|EJK64564.1| hypothetical protein THAOC_14691, partial [Thalassiosira oceanica]
Length = 1534
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 102/230 (44%), Gaps = 59/230 (25%)
Query: 52 EFDNLYLDMNGIIHPCTH-----------------PEDKP----APKDEDEMMVAIFECI 90
EFD LYLDMNGIIH +H D+P + E+++ + +
Sbjct: 206 EFDRLYLDMNGIIHCASHNNSEEEVEKQIDGKESTDTDRPRIVGSAITEEQIFQNVCYYL 265
Query: 91 DRLFR-IVRPRKLLYMAIDGVAPRAKMNQP-----------------LTV---------- 122
DR+ IV+P +L+++AIDGVAPRAK+NQ +T+
Sbjct: 266 DRVISDIVQPTELVFLAIDGVAPRAKLNQQRSRRYRSGTEEEIEHHLMTLQRAKSSDHSD 325
Query: 123 -----YSVLYDRGNYST-WQLMRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEK 176
Y + D G + W + R R ++ + KI A + A + +
Sbjct: 326 VDSAEYLIEADGGAFDGFWPMDRDDTARGAQRFSGKIE--ATTDKSSSASVSVDQTPTVQ 383
Query: 177 GSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
G F SN ITPGT F S+ + +I ++L+ DP WK + +I S +VP
Sbjct: 384 G--FHSNAITPGTLFFDRCSSRIIAFIREKLDTDPRWKNLTIIFSGHDVP 431
>gi|403221200|dbj|BAM39333.1| 5'-3' exoribonuclease 1 [Theileria orientalis strain Shintoku]
Length = 642
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 106/234 (45%), Gaps = 36/234 (15%)
Query: 4 TQEGSSVKSTPGRQDSKPYSFASLVSLP-------QEVNGQKIPFDSSKPNPNGMEFDNL 56
+Q + P R+DS P F L +P + + +IP S + D
Sbjct: 64 SQNFNFTNHDPLRKDSLPQRF-KLQGVPRLYGWMMENFSKMRIPLQDSDIYG---KVDYF 119
Query: 57 YLDMNGIIHPCTHPEDKPAPKDEDEM-MVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAK 115
Y+DMN +IH TH P+ ED+ M I + ++F++V+P+K++Y+ +DGV P AK
Sbjct: 120 YVDMNAVIHAATHGNVSPSLMMEDQQRMRRIVTALLKIFKLVKPKKMMYIGVDGVCPSAK 179
Query: 116 MNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCI--LPPE 173
+NQ R+RRFR K T + + E+ + + LP +
Sbjct: 180 INQ-------------------QRTRRFRLYKSTTKPGFKPYYKSEEGKYEYTVKKLPIQ 220
Query: 174 KEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPG-WKGIKVILSDANVP 226
FD + I+PGT FM+ + + L +I L G W+ ++ S +VP
Sbjct: 221 SYDNVSFDPSYISPGTEFMSMMDSELRNWI--ALQTYEGTWEDRYIVYSGTDVP 272
>gi|440298458|gb|ELP91094.1| 5'->3' exoribonuclease, putative [Entamoeba invadens IP1]
Length = 608
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 82/188 (43%), Gaps = 59/188 (31%)
Query: 41 FDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPR 100
FD S+PNPNG E+DNLY+D+NG+IH ++ + ++ + I L IVRPR
Sbjct: 27 FDFSQPNPNGREYDNLYIDLNGLIHGSLDYTTI------EQTIESLNQKILELVSIVRPR 80
Query: 101 KLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIR 160
LL+++IDGV P AKM Q R RRF E
Sbjct: 81 SLLFISIDGVCPVAKMVQ-------------------QRKRRFTPDNE------------ 109
Query: 161 EKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND--PGWKGIKV 218
D N ITPGT FM +S + +I ++NN ++ IK
Sbjct: 110 --------------------DGNKITPGTDFMEKISTGVESFILSQMNNVGLDYFRRIKT 149
Query: 219 ILSDANVP 226
I+S + P
Sbjct: 150 IVSGVHSP 157
>gi|145506154|ref|XP_001439043.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124406216|emb|CAK71646.1| unnamed protein product [Paramecium tetraurelia]
Length = 1199
Score = 79.0 bits (193), Expect = 1e-12, Method: Composition-based stats.
Identities = 58/194 (29%), Positives = 94/194 (48%), Gaps = 41/194 (21%)
Query: 38 KIPFDSSKPNPNGMEFDNLYLDMNGIIHPC----THPEDKPAPKDEDEMMVAIFECIDRL 93
K PF +G + D LYLDMN +I+ C T +D K + + +I ID +
Sbjct: 18 KYPFTKH----HGHQIDFLYLDMNQVIYKCATNQTILKDYMIEKSIESLWTSILNYIDTI 73
Query: 94 FRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKI 153
+V P+ ++Y+ DGVAPRAK NQ R RRF +SK
Sbjct: 74 INLVDPQLVIYLTFDGVAPRAKANQ-------------------QRQRRFASSKGD---- 110
Query: 154 AEVARIREKLLADGCILPPEKEKGSH-FDSNCITPGTPFMACLSACLHYYIHDRLNNDPG 212
A++ ++ ++L + E+ +H F +N IT GT FM L+ + ++I+ + D
Sbjct: 111 AKIKQLLKQL---------DLEQQNHTFKNNQITAGTEFMYELNEQVKFFINRKFKEDEK 161
Query: 213 WKGIKVILSDANVP 226
+ ++VI S ++VP
Sbjct: 162 YANLQVIFSGSDVP 175
>gi|218199347|gb|EEC81774.1| hypothetical protein OsI_25462 [Oryza sativa Indica Group]
Length = 188
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 18 DSKPYSFASLVSLPQEVN-GQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAP 76
D P + + V P E+ G +P D +PNPNG+EF+NLYLDMNGIIHPC HPE PAP
Sbjct: 12 DRYPQTVSDAVEEPVELEPGAFVPVDLCRPNPNGLEFNNLYLDMNGIIHPCFHPEGHPAP 71
Query: 77 KDEDEMM 83
DE+
Sbjct: 72 TTYDEVF 78
>gi|32766355|gb|AAH55175.1| Zgc:63635 protein [Danio rerio]
Length = 510
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 52/86 (60%), Gaps = 11/86 (12%)
Query: 141 RRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLH 200
RRFR++KE EKI +K L G +LP E + FDSNCITPGT FMA L L
Sbjct: 11 RRFRSAKEAEEKI-------KKALEKGEVLPTE----ARFDSNCITPGTDFMARLQEQLK 59
Query: 201 YYIHDRLNNDPGWKGIKVILSDANVP 226
Y++H++L+ D W+G+ V LS P
Sbjct: 60 YFVHNKLSTDKTWQGVNVYLSGHETP 85
>gi|156086892|ref|XP_001610853.1| 5'-3' exonuclease [Babesia bovis T2Bo]
gi|154798106|gb|EDO07285.1| 5'-3' exonuclease, putative [Babesia bovis]
Length = 509
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 68/147 (46%), Gaps = 22/147 (14%)
Query: 54 DNLYLDMNGIIHPCTHPEDKPAPKDEDEM-MVAIFECIDRLFRIVRPRKLLYMAIDGVAP 112
D+LY+DMN +IH TH P + +E + I I+ +F IVRPRK+LYMA+DGV P
Sbjct: 26 DHLYMDMNAVIHVATHGNISPVVQMANEQRLRRITSAIEMMFDIVRPRKMLYMAVDGVCP 85
Query: 113 RAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKET--AEKIAEVARIREKLLADGCIL 170
AK+NQ R RRF SK I + L
Sbjct: 86 TAKINQ-------------------QRGRRFLTSKNVDPLADICSAVSAEDGYTYIAKRL 126
Query: 171 PPEKEKGSHFDSNCITPGTPFMACLSA 197
P ++ F+ N I+PGT FM + +
Sbjct: 127 PFDEYDNVSFNPNYISPGTDFMKIVDS 153
>gi|219125787|ref|XP_002183154.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217405429|gb|EEC45372.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 151
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 68/131 (51%), Gaps = 33/131 (25%)
Query: 32 QEVNGQKIPFDSSKPNPNGM-----EFDNLYLDMNGIIHPCTH--------PEDKPAPKD 78
QE G P + KP+P E D LY+DMNGIIH C+H E+ A
Sbjct: 31 QEHFGTDPPANMPKPDPLSTCGLAPEIDRLYIDMNGIIHGCSHNNSEAEENGEEGVANIS 90
Query: 79 EDEMMVAIFECIDRLFR-IVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQL 137
EDE+ I +DR+ + I +P++L+YMAIDGVAPRAK+NQ
Sbjct: 91 EDEIFRNICYYLDRVVKDIAKPKQLVYMAIDGVAPRAKLNQ------------------- 131
Query: 138 MRSRRFRASKE 148
RSRR+R+ KE
Sbjct: 132 QRSRRYRSGKE 142
>gi|258597213|ref|XP_001347750.2| exonuclease, putative [Plasmodium falciparum 3D7]
gi|254832599|gb|AAN35663.2| exonuclease, putative [Plasmodium falciparum 3D7]
Length = 734
Score = 76.6 bits (187), Expect = 7e-12, Method: Composition-based stats.
Identities = 46/147 (31%), Positives = 67/147 (45%), Gaps = 41/147 (27%)
Query: 47 NPNGMEFDNLYLDMNGIIHPCTHPEDKPAP-KDEDEMMVAIFECIDRLFRIVRPRKLLYM 105
N D Y+DMNG+IH CTH + P DE E+ I + + LF +++P+KL+Y+
Sbjct: 68 NEKQKSVDIFYIDMNGVIHHCTHANKEKLPIYDEHELFSNILQYLKNLFYLIKPKKLIYI 127
Query: 106 AIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLA 165
+DGV+P+AKMNQ R RRF + + +I +
Sbjct: 128 GVDGVSPKAKMNQ-------------------QRKRRFLS----------IFKINDN--- 155
Query: 166 DGCILPPEKEKGSHFDSNCITPGTPFM 192
+ F+ NCIT GT FM
Sbjct: 156 --------DNTSNLFNPNCITTGTDFM 174
>gi|223993125|ref|XP_002286246.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220977561|gb|EED95887.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 182
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 71/138 (51%), Gaps = 21/138 (15%)
Query: 90 IDRLFR-IVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKE 148
+DR+ IV+P++L+++AIDGVAPRAK+NQ RSRR+R+ E
Sbjct: 8 LDRIVSDIVQPKQLVFLAIDGVAPRAKLNQ-------------------QRSRRYRSGSE 48
Query: 149 TAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLN 208
++ + + +D + E F SNCITPGTPF+ S + +I +L
Sbjct: 49 KEIEMHLMTLQPISINSDESAELSQDENHG-FHSNCITPGTPFLYKCSQRILEFIRHKLQ 107
Query: 209 NDPGWKGIKVILSDANVP 226
DP W + +I S +VP
Sbjct: 108 TDPKWHDLTIIFSGHDVP 125
>gi|330804007|ref|XP_003289991.1| hypothetical protein DICPUDRAFT_80750 [Dictyostelium purpureum]
gi|325079889|gb|EGC33468.1| hypothetical protein DICPUDRAFT_80750 [Dictyostelium purpureum]
Length = 1065
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 87/184 (47%), Gaps = 34/184 (18%)
Query: 51 MEFDNLYLDMNGIIHPCTHPED--------KPAPKDEDEMMVAIFECIDRLFRIVRPRKL 102
++FDNLY+DMNG+IH + K KDED + +++ +D++ V P KL
Sbjct: 26 IQFDNLYIDMNGVIHNSIKVDKRGKYGLIYKDDIKDED-IKQSVYWRLDQMILSVNPSKL 84
Query: 103 LYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREK 162
LY+ IDGV PRAK + R RRF++ KE+ I + +
Sbjct: 85 LYIGIDGVPPRAKAVE-------------------QRRRRFKSVKESKANILTELKKSKP 125
Query: 163 LLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSD 222
++D + + + FDSN I+P T F+ ++ + Y P + ++LSD
Sbjct: 126 YVSDEEL---SEIQSKVFDSNSISPATEFIEKINQWIKEYCEKLSTERP---SLTIVLSD 179
Query: 223 ANVP 226
+ VP
Sbjct: 180 STVP 183
>gi|321444979|gb|EFX60557.1| hypothetical protein DAPPUDRAFT_19557 [Daphnia pulex]
Length = 74
Score = 75.9 bits (185), Expect = 1e-11, Method: Composition-based stats.
Identities = 37/68 (54%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAPKD-EDEMMVAIFECIDRLFRIVRPRKLLYMAIDGV 110
E+DNLY+D+N I+H C D E +M +FE ID++F IVRPRKLLY+A+DGV
Sbjct: 1 EYDNLYIDLNEIVHNCVRAARFHNADDRERRIMEILFEKIDQIFSIVRPRKLLYVALDGV 60
Query: 111 APRAKMNQ 118
APRAK Q
Sbjct: 61 APRAKRTQ 68
>gi|407838780|gb|EKG00159.1| 5'-3' exonuclease XRNB, putative,exoribonuclease 2, putative
[Trypanosoma cruzi]
Length = 1070
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 95/230 (41%), Gaps = 66/230 (28%)
Query: 56 LYLDMNGIIHPCTHPEDKP--APKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPR 113
LY+D+NG+IHPC H E P A + E+E + I ++ L IVRP +LY+A DGVAPR
Sbjct: 120 LYIDLNGLIHPCCHSERDPSVAARPEEEKLQCICCEVEVLLAIVRPHDILYIATDGVAPR 179
Query: 114 AKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRAS--------KETAEKIAEVARIREKLLA 165
AKMNQ R S ++M S E AE ++ IR+ L+
Sbjct: 180 AKMNQQRA-------RRYMSRAKIMSSGTEVVEEVVREFTPNEMAEVDDDLDDIRQLLMQ 232
Query: 166 D---GCIL----PPEKEKGSHFDSNCITPGTP---------------------------- 190
D G ++ E G ++ +TP TP
Sbjct: 233 DALYGGVMFQDDTSETLNGVANIADSLTPVTPCHDKSNNHEAHTEAWAAFDGLTDGTLEV 292
Query: 191 -------------FMACLSACLHYYIHDRL-NNDPGWKGIKVILSDANVP 226
FM + + + D+L N DP W G++V+ S AN P
Sbjct: 293 TEFDSNCISPGTAFMVKVKNAILTMVQDKLANGDPLWAGLRVVFSGANTP 342
>gi|290992973|ref|XP_002679108.1| 5'-3' exoribonuclease 1 [Naegleria gruberi]
gi|284092723|gb|EFC46364.1| 5'-3' exoribonuclease 1 [Naegleria gruberi]
Length = 968
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 98/232 (42%), Gaps = 38/232 (16%)
Query: 21 PYSFASLVSLPQEVNGQKIPFDSSKPNPNG-MEFDNLYLDMNGIIHPC------------ 67
P+ F+ L+S E+ + IP S+ + N M D+LYLDMNGIIH
Sbjct: 4 PFLFSFLLSECPEMIKEIIPSSSASSSSNTTMTIDHLYLDMNGIIHTFKDTNLQTKLLER 63
Query: 68 -------------THPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRA 114
++ E+ P ++ + +I ++ + RP K L A+DG AP A
Sbjct: 64 LVSSSSSSSSSSSSNNEEVEIPMTMEKFIFSILLYLEEVIYRFRPSKTLMFALDGSAPCA 123
Query: 115 KMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCILPPEK 174
K+NQ W + + + L G +K
Sbjct: 124 KINQQ-----------RERRWVSFNNHSGLPKRHHHHHQHGNHHGEQHDLHHGEENRKKK 172
Query: 175 EKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIK-VILSDANV 225
E S FDS IT GT FM LS L ++I +L +DP W+ I+ +I SD++V
Sbjct: 173 EDESLFDSISITSGTSFMKELSEHLQFFIKRKLQDDPNWRNIENIIFSDSSV 224
>gi|399218119|emb|CCF75006.1| unnamed protein product [Babesia microti strain RI]
Length = 759
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 87/186 (46%), Gaps = 34/186 (18%)
Query: 50 GMEFDNLYLDMNGIIHPCTHPEDKPAPKD--EDEMMVAIFECIDRLFRIVRPRKLLYMAI 107
G D LYLD+NGI HP TH + P D + + IF I ++ I++P+KLLY+A
Sbjct: 61 GKNIDCLYLDLNGIYHPATHG-NVPIQLDIGQSQRFKRIFTAISNIYSIIKPKKLLYLAS 119
Query: 108 DGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRAS------KETAEKIAEVARIRE 161
DGV P AK+NQ R+RR R+S + E+ A + + E
Sbjct: 120 DGVCPAAKINQ-------------------QRTRRNRSSIGNIQDQINPERFANIQKQLE 160
Query: 162 KLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKG-IKVIL 220
+L+ C + F N I+PGT F+ L L ++ L G+ G V+
Sbjct: 161 TVLS-SC--GDNRTSTQPFTPNMISPGTEFIVTLENELRKWLF--LKVSEGFFGNCDVVF 215
Query: 221 SDANVP 226
S ++VP
Sbjct: 216 SGSDVP 221
>gi|407400385|gb|EKF28636.1| 5'-3' exonuclease XRNB, putative,exoribonuclease 2, putative,
partial [Trypanosoma cruzi marinkellei]
Length = 1026
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 97/224 (43%), Gaps = 54/224 (24%)
Query: 56 LYLDMNGIIHPCTHPEDKP--APKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPR 113
LY+D+NG+IHPC H E P A + E+E + I ++ L VRP +LY+A DGVAPR
Sbjct: 76 LYIDLNGLIHPCCHSERDPSVAARPEEEKLQCICSEVEVLLATVRPHDILYIATDGVAPR 135
Query: 114 AKMNQPLTVYSVLYDRGNYSTWQLMRS--RRFRASKETAEKIAEVARIREKLLAD---GC 168
AKMNQ + + S ++ R F E AE ++ IR+ L+ D G
Sbjct: 136 AKMNQQRARRYMNRAKIMTSGAAIVEEVVREF-TPNEMAEVDDDLDDIRQLLMQDALYGG 194
Query: 169 IL----PPEKEKGSHFDSNCITPGTP---------------------------------- 190
++ E G ++ +TP TP
Sbjct: 195 VMFQEDTTETLNGVANIADTLTPVTPCNDKSQNDEIVAGASAKFDGRTDGTLEVTEFDSS 254
Query: 191 -------FMACLSACLHYYIHDRL-NNDPGWKGIKVILSDANVP 226
FMA ++ + + D+L N +P W G++V+ S A+ P
Sbjct: 255 CISPGTAFMAKVTNAILTLVQDKLANGEPLWAGLRVVFSGASTP 298
>gi|389600932|ref|XP_001563893.2| putative 5'-3' exonuclease [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|322504577|emb|CAM37939.2| putative 5'-3' exonuclease [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 1108
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 47/69 (68%), Gaps = 2/69 (2%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKP--APKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
+ LY+D+NG+IHPC H E P A + E+ + +I I+ L VRP+ LLY+AIDG
Sbjct: 25 DVHGLYIDLNGLIHPCCHNEHDPSVALRTEEGKLRSICLAIETLVVTVRPQHLLYIAIDG 84
Query: 110 VAPRAKMNQ 118
VAPRAKMNQ
Sbjct: 85 VAPRAKMNQ 93
Score = 43.5 bits (101), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 34/74 (45%), Gaps = 26/74 (35%)
Query: 178 SHFDSNCITPGTPFMACLSACLHYYIHDRL---NNDPG---------------------- 212
+ FDSNCI+PGT FM ++A + YIH +L ND G
Sbjct: 215 ARFDSNCISPGTVFMDAVAAAVRDYIHRKLAPKANDGGDSAEVEAGSSPSSSTTINAPCA 274
Query: 213 -WKGIKVILSDANV 225
W G+ V+ SD+N
Sbjct: 275 HWAGLTVVFSDSNT 288
>gi|168067648|ref|XP_001785722.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662628|gb|EDQ49457.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 68
Score = 73.9 bits (180), Expect = 4e-11, Method: Composition-based stats.
Identities = 28/40 (70%), Positives = 36/40 (90%)
Query: 34 VNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDK 73
+ G K+P D+++PNPNG+E+DNLYLDMNGIIHPC HPED+
Sbjct: 29 IEGVKVPIDTTQPNPNGLEYDNLYLDMNGIIHPCFHPEDR 68
>gi|147866227|emb|CAN79939.1| hypothetical protein VITISV_027778 [Vitis vinifera]
Length = 918
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
Query: 42 DSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDE-DEMMVAIFECIDRLFRI 96
+SS NPNG+EFDNLYLDMNGIIHPC HPED+ P +E+ ++E IDR+F I
Sbjct: 27 ESSSANPNGIEFDNLYLDMNGIIHPCFHPEDQIFPPTTFEEVFNNMYEYIDRIFSI 82
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 154 AEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGW 213
AE R+R + + L P++E D N ITPGT FM +S L YI R+ ++ GW
Sbjct: 84 AEEQRLRRQYEMEXKPLVPKQESQVS-DPNIITPGTVFMHEVSKALQQYICSRMKHEAGW 142
Query: 214 KGIKVILSDANVP 226
K +KVILSD+NVP
Sbjct: 143 KDLKVILSDSNVP 155
>gi|157867636|ref|XP_001682372.1| putative 5'-3' exonuclease [Leishmania major strain Friedlin]
gi|68125825|emb|CAJ03874.1| putative 5'-3' exonuclease [Leishmania major strain Friedlin]
Length = 1164
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 105/263 (39%), Gaps = 91/263 (34%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKP--APKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
+ LY+D+NG+IHPC H E P A + ++E + +I I+ L VRP++++Y+AIDG
Sbjct: 25 DVHGLYIDLNGLIHPCCHDEHDPSVALRTQEEKLRSICLAIETLVVTVRPQRVIYIAIDG 84
Query: 110 VAPRAKMNQ-----------PLTVYSVLYDRGNY---STWQLMRSRRF-RASKETAEKIA 154
V PRAKMNQ PLT G++ +T + F +A + E+
Sbjct: 85 VVPRAKMNQQRARRYMSSAAPLTDTDKPIHGGSHKMSATIVAAIEKEFTQAECDGVER-- 142
Query: 155 EVARIREKLLAD----GC-----------------------ILPPEKEKGSHFDSNC--- 184
E+A + + L+ D GC +PP D+ C
Sbjct: 143 ELADVSQALMGDVLYGGCATMALAEDATEKAEAHTLAAAPWTIPPTLASEGKKDACCAAA 202
Query: 185 -------------------ITPGTPFMACLSACLHYYIHDRL---NNDPG---------- 212
I+PGT FM ++ + YI +L ND G
Sbjct: 203 QVGRQPAAAASPAKFDSNCISPGTAFMDAVATAVRDYIRRKLAPKENDAGGKAEAEAGAS 262
Query: 213 ----------WKGIKVILSDANV 225
W G+ VI SD+N
Sbjct: 263 PAAITATCAHWAGLTVIFSDSNT 285
>gi|428673024|gb|EKX73937.1| XRN 5'-3' exonuclease family protein [Babesia equi]
Length = 1049
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 92/208 (44%), Gaps = 42/208 (20%)
Query: 36 GQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEM-MVAIFECIDRLF 94
G + P SS NG+++ Y+DMN +IH TH P ED+ M I + F
Sbjct: 455 GMRKPLKSSDLE-NGVDY--FYVDMNALIHSATHGNIYPVVTIEDQQRMKRITAALLNTF 511
Query: 95 RIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIA 154
++V+PRK++Y+A+DGV P AK+NQ R+RRFR K +K+
Sbjct: 512 KLVKPRKVMYIAVDGVCPSAKINQ-------------------QRTRRFRLCK-VIDKVK 551
Query: 155 EV------------ARIREKLLADGCILPPEKEKGS---HFDSNCITPGTPFMACLSACL 199
+ + + L + +L K G F+ N I+PGT FM L +
Sbjct: 552 SILEPEEDTESEEDSEEPKPLTPENYVLRKSKIDGYDNISFNPNYISPGTDFMTRLDNEI 611
Query: 200 HYYIHDRLNNDPG-WKGIKVILSDANVP 226
+I L G W V+ S NVP
Sbjct: 612 KNWI--ALQTHLGTWGDCYVVYSGTNVP 637
>gi|342181047|emb|CCC90525.1| unnamed protein product, partial [Trypanosoma congolense IL3000]
Length = 244
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 51/84 (60%), Gaps = 4/84 (4%)
Query: 37 QKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPE--DKPAPKDEDEMMVAIFECIDRLF 94
K P SK P+ LY+D+NGIIHPC H + A E+E + I +D L
Sbjct: 12 NKYPATISKGGPSTAH--GLYVDLNGIIHPCCHSDFDSTIALLPEEEKLSCICSELDLLV 69
Query: 95 RIVRPRKLLYMAIDGVAPRAKMNQ 118
+IV+P +LY+AIDGVAPRAKMNQ
Sbjct: 70 KIVKPTDVLYIAIDGVAPRAKMNQ 93
>gi|146083592|ref|XP_001464783.1| putative 5'-3' exonuclease [Leishmania infantum JPCM5]
gi|134068877|emb|CAM59811.1| putative 5'-3' exonuclease [Leishmania infantum JPCM5]
Length = 1158
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 47/69 (68%), Gaps = 2/69 (2%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKP--APKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
+ LY+D+NG+IHPC H E P A + ++E + +I I+ L VRP+ ++Y+A+DG
Sbjct: 25 DVHGLYIDLNGLIHPCCHDEHDPSVALRTQEEKLRSICLAIETLVVTVRPQHVIYIAVDG 84
Query: 110 VAPRAKMNQ 118
V PRAKMNQ
Sbjct: 85 VVPRAKMNQ 93
Score = 44.3 bits (103), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 35/78 (44%), Gaps = 23/78 (29%)
Query: 171 PPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRL----NNDPG-------------- 212
P + FDSNCI+PGT FM ++A + YI +L N+D G
Sbjct: 208 PAAAASPAKFDSNCISPGTAFMDAVAAAVRDYIRHKLAPKKNDDGGKAEAEAGASPAAIN 267
Query: 213 -----WKGIKVILSDANV 225
W G+ VI SD+N
Sbjct: 268 ATCAHWAGLTVIFSDSNT 285
>gi|71425179|ref|XP_813034.1| 5'-3' exonuclease XRNB [Trypanosoma cruzi strain CL Brener]
gi|70877881|gb|EAN91183.1| 5'-3' exonuclease XRNB, putative [Trypanosoma cruzi]
Length = 1068
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 44/65 (67%), Gaps = 2/65 (3%)
Query: 56 LYLDMNGIIHPCTHPEDKP--APKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPR 113
LY+D+NG+IHPC H E P A + E+E + I ++ L VRP +LY+A DGVAPR
Sbjct: 118 LYIDLNGLIHPCCHSERDPSVAARPEEEKLQCICFKVEVLLATVRPHDILYIATDGVAPR 177
Query: 114 AKMNQ 118
AKMNQ
Sbjct: 178 AKMNQ 182
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 178 SHFDSNCITPGTPFMACLSACLHYYIHDRL-NNDPGWKGIKVILSDANVP 226
+ FDSNCI+PGT FM ++ + + D+L N DP W G++V+ S AN P
Sbjct: 291 TEFDSNCISPGTAFMVKVTNAILTMVQDKLANGDPLWAGLRVVFSGANTP 340
>gi|398013576|ref|XP_003859980.1| 5'-3' exonuclease, putative, partial [Leishmania donovani]
gi|322498198|emb|CBZ33273.1| 5'-3' exonuclease, putative, partial [Leishmania donovani]
Length = 486
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 46/69 (66%), Gaps = 2/69 (2%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKP--APKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 109
+ LY+D+NG+IHPC H E P A + + E + +I I+ L VRP+ ++Y+A+DG
Sbjct: 25 DVHGLYIDLNGLIHPCCHDEHDPSVALRTQGEKLRSICLAIETLVVTVRPQHVIYIAVDG 84
Query: 110 VAPRAKMNQ 118
V PRAKMNQ
Sbjct: 85 VVPRAKMNQ 93
Score = 44.7 bits (104), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 35/78 (44%), Gaps = 23/78 (29%)
Query: 171 PPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRL----NNDPG-------------- 212
P + FDSNCI+PGT FM ++A + YI +L N+D G
Sbjct: 208 PAAAASPAKFDSNCISPGTAFMDAVAAAVRDYIRHKLAPKKNDDGGKAEAEAGASPAAIN 267
Query: 213 -----WKGIKVILSDANV 225
W G+ VI SD+N
Sbjct: 268 ATCAHWAGLTVIFSDSNT 285
>gi|302853934|ref|XP_002958479.1| hypothetical protein VOLCADRAFT_108142 [Volvox carteri f.
nagariensis]
gi|300256207|gb|EFJ40479.1| hypothetical protein VOLCADRAFT_108142 [Volvox carteri f.
nagariensis]
Length = 1602
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 90/202 (44%), Gaps = 50/202 (24%)
Query: 54 DNLYLDMNGIIHPCTH--------PEDKPAPKDE-DEMMVAIFECIDRLF---------- 94
D LY+DMN IIH CTH P D+ A + D + A+ E D
Sbjct: 36 DALYVDMNHIIHSCTHANTGSDGLPYDENAAFERMDAYLTALLEIADGGGAAAGADTAAA 95
Query: 95 -------RIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASK 147
R P +LL++AIDGVAP AKMNQ R+RRF S
Sbjct: 96 AAKATNSRPPSPLRLLFVAIDGVAPIAKMNQ-------------------QRTRRF-LSA 135
Query: 148 ETAEKIAEVAR-IREKLL--ADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIH 204
AE V R +R ++ A G P+ S FD N I+ GT FM+ ++ + +
Sbjct: 136 HVAEVTDHVEREVRAEMTSQAGGSRTIPDT-SSSRFDPNIISIGTVFMSRVADRVRAMLR 194
Query: 205 DRLNNDPGWKGIKVILSDANVP 226
++ DP + ++VI+SD+ P
Sbjct: 195 TKVQTDPRFTQLRVIVSDSYEP 216
>gi|71033443|ref|XP_766363.1| 5'-3' exonuclease [Theileria parva strain Muguga]
gi|68353320|gb|EAN34080.1| 5'-3' exonuclease, putative [Theileria parva]
Length = 534
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 78/179 (43%), Gaps = 23/179 (12%)
Query: 50 GMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEM-MVAIFECIDRLFRIVRPRKLLYMAID 108
G D Y+DMN +IH TH P ED+ M I + F++V P+K++Y+ +D
Sbjct: 62 GRGVDYFYVDMNAVIHSATHGNLFPVLMMEDQQRMRRIVTAMLNTFKLVNPKKMMYIGVD 121
Query: 109 GVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGC 168
GV P AK+NQ R+RRFR K ++ ++
Sbjct: 122 GVCPSAKINQQ-------------------RTRRFRLYKSSSSDNEYYKGENGEMKYKVN 162
Query: 169 ILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPG-WKGIKVILSDANVP 226
L F+ + I+PGT FM+ + + + +I L N G W ++ S +VP
Sbjct: 163 KLKVGAYDNVTFNPSYISPGTQFMSMMDSEIRNWI--ALQNYEGTWNDCYIVYSGTDVP 219
>gi|407400381|gb|EKF28633.1| 5'-3' exonuclease XRNB, putative,exoribonuclease 2, putative,
partial [Trypanosoma cruzi marinkellei]
Length = 243
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
Query: 55 NLYLDMNGIIHPCTHPEDKP--APKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAP 112
LY+D+NG+IHPC H E P A + E+E + I ++ L VRP + Y+A DGVAP
Sbjct: 122 GLYIDLNGLIHPCCHSERDPSVAARPEEEKLQCICSEVEVLLATVRPHDIFYIATDGVAP 181
Query: 113 RAKMNQ 118
RAKMNQ
Sbjct: 182 RAKMNQ 187
>gi|358340790|dbj|GAA27297.2| 5'-3' exoribonuclease 1 [Clonorchis sinensis]
Length = 1804
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 65/134 (48%), Gaps = 31/134 (23%)
Query: 93 LFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEK 152
L +++RPRK L++A+DGVAPRAKM Q R+RRF++++E +
Sbjct: 9 LVQLIRPRKTLFLAVDGVAPRAKMTQ-------------------QRARRFQSAQEARKT 49
Query: 153 IAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPG 212
A+ + + + FD I+PGT FM L L ++ ++ N +
Sbjct: 50 KADAQKRGQATSVE------------LFDPCVISPGTEFMERLHNVLKEFVKEQANQNEA 97
Query: 213 WKGIKVILSDANVP 226
WK + +ILS + P
Sbjct: 98 WKHVDIILSGHDCP 111
>gi|84998436|ref|XP_953939.1| 5'-3' exoribonuclease (XRN2, DHM1 ) [Theileria annulata]
gi|65304937|emb|CAI73262.1| 5'-3' exoribonuclease (XRN2, DHM1 homologue), putative [Theileria
annulata]
Length = 619
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 87/191 (45%), Gaps = 26/191 (13%)
Query: 38 KIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEM-MVAIFECIDRLFRI 96
+IP D S+ + D Y+DMN +IH TH P ED+ M I + F +
Sbjct: 95 RIPLDDSEISKG---VDYFYVDMNAVIHSATHGNIFPILMMEDQQRMRRIVAALLNTFNL 151
Query: 97 VRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEV 156
V+P+K++Y+ +DGV P AK+NQ R+RRFR K + E
Sbjct: 152 VKPKKMMYIGVDGVCPSAKINQ-------------------QRTRRFRLYKSSNSD-NEY 191
Query: 157 ARIRE-KLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKG 215
++ + K+ L F+ + I+PGT FM+ + + + +I + N + W
Sbjct: 192 YKVEDGKMKYKVNKLKIGAYDNVSFNPSYISPGTQFMSMMDSEIRNWIALQ-NYEGTWND 250
Query: 216 IKVILSDANVP 226
++ + +VP
Sbjct: 251 CYIVYNGTDVP 261
>gi|384483989|gb|EIE76169.1| hypothetical protein RO3G_00873 [Rhizopus delemar RA 99-880]
Length = 1163
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 83/171 (48%), Gaps = 46/171 (26%)
Query: 58 LDMNGIIHPC--THPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAK 115
D+ I++ T+ D+ +E++++ IF I ++ ++P+K+ ++ +DGV PR K
Sbjct: 31 FDITDIVYNSCQTNSFDRYHRLNEEQILPRIFNKICYIYGQIKPKKIFFLTVDGVTPRIK 90
Query: 116 MNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKE 175
MNQ RS++F+++KE+ I+ + LAD
Sbjct: 91 MNQE-------------------RSKQFQSAKESL--------IKREPLAD--------- 114
Query: 176 KGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
+ PGT FMA L+A L Y + +++ D W+ ++VI+S +VP
Sbjct: 115 --------VVLPGTAFMAKLTAQLRYLVAKKISEDIEWRDVEVIVSGPDVP 157
>gi|328869830|gb|EGG18205.1| hypothetical protein DFA_03692 [Dictyostelium fasciculatum]
Length = 1061
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 61/118 (51%), Gaps = 27/118 (22%)
Query: 46 PNPNGMEFDNLYLDMNGIIHPCTHPEDKPA--------PKDEDEMMVAIFECIDRLFRIV 97
P N ++F+NLY+DMNG+IH TH + +P+ P +D + IF+ ++ +
Sbjct: 50 PRCNNVKFNNLYIDMNGVIHNSTHAKGEPSVESIMASKPNTDDTIKENIFKRLNDIIVTT 109
Query: 98 RPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAE 155
P L+Y+A+DGV PRAK + R RRFR++K+ E +++
Sbjct: 110 NPSDLVYIALDGVPPRAKATE-------------------QRRRRFRSAKDIREILSK 148
>gi|261328233|emb|CBH11210.1| 5'-3' exonuclease, putative [Trypanosoma brucei gambiense DAL972]
Length = 1036
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 46/65 (70%), Gaps = 2/65 (3%)
Query: 56 LYLDMNGIIHPCTHPEDKPAPK--DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPR 113
LY+D+NGIIHPC H + A E+E + I ++ L + V+P++++Y+A+DGVAPR
Sbjct: 29 LYIDLNGIIHPCCHNDSDTAIALLPEEEKLECICSELELLVQTVQPKEVMYIAVDGVAPR 88
Query: 114 AKMNQ 118
AKMNQ
Sbjct: 89 AKMNQ 93
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Query: 180 FDSNCITPGTPFMACLSACLHYYIHDRLN-NDPGWKGIKVILSDANVP 226
FDSNCI+PGT FMA +S + ++++++ NDP W + VI S +N P
Sbjct: 226 FDSNCISPGTDFMAKVSDAVLNMLNEKMSGNDPTWTRLCVIFSGSNTP 273
>gi|308160629|gb|EFO63105.1| 5'-3' exoribonuclease 2 [Giardia lamblia P15]
Length = 1954
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 93/194 (47%), Gaps = 23/194 (11%)
Query: 37 QKIPFDSSKPNPNGME-FDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMV--AIFECIDRL 93
++ P + P + + DNLY+D N +IH +D P E M+ I + I L
Sbjct: 12 ERYPLAVTTPGASFVSRIDNLYIDFNALIHESIR-KDSYIPFTFTEAMIFGEIADYIQVL 70
Query: 94 FRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRAS-KETAEK 152
V+PRK +++A DGVAP AK Q T R ++ + + +R + TA
Sbjct: 71 VSTVQPRKRIFIATDGVAPSAKAKQQRT-------RRYMGAYESVGVKLYRNNIAGTATI 123
Query: 153 IAEVARIREKLLADGC----ILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLN 208
++EV + K +A+G LPP+ K + I+PGT FM L + L ++ ++
Sbjct: 124 LSEVEFLTSKHIANGNNDDQTLPPQNLKAA------ISPGTLFMDRLHSFLIAFVAKNVD 177
Query: 209 ND-PGWKGIKVILS 221
++ PGW V +S
Sbjct: 178 SEAPGWVQPAVTIS 191
>gi|66804489|ref|XP_635977.1| hypothetical protein DDB_G0289921 [Dictyostelium discoideum AX4]
gi|60464324|gb|EAL62473.1| hypothetical protein DDB_G0289921 [Dictyostelium discoideum AX4]
Length = 1235
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 92/213 (43%), Gaps = 58/213 (27%)
Query: 47 NPNG-MEFDNLYLDMNGIIHPCT--------------------------HPEDK------ 73
N NG ++F+NLY+DMNG++H + +DK
Sbjct: 21 NLNGEIKFNNLYIDMNGVVHNAIKLDHSPTSSSSSSSTTTTPPTTPTTTYSKDKEVVLML 80
Query: 74 PAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYS 133
+ ++++ IF +D++ V P LLY+ +DGV PRAK +
Sbjct: 81 KSELSDEKLKERIFYRLDQMVNNVNPSSLLYIGVDGVPPRAKAIE--------------- 125
Query: 134 TWQLMRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMA 193
R RRF++SKET + I + + + K + I+ ++ FDSN I+P T F+
Sbjct: 126 ----QRKRRFKSSKETVDVIIKQLKSKSKPITRDSII---EQFSLIFDSNSISPATEFIE 178
Query: 194 CLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
+ + Y + + +ILSD+ VP
Sbjct: 179 KVDDWIKDYCKQL---SLKRQNLSIILSDSTVP 208
>gi|123432925|ref|XP_001308510.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
gi|121890194|gb|EAX95580.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
Length = 966
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 67/174 (38%), Gaps = 44/174 (25%)
Query: 53 FDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAP 112
FD ++D N IIH EDE++ + +D L +V+P KLLY+++DG AP
Sbjct: 29 FDCFFVDFNCIIHNAIRTIQGSKDLIEDELITEVLRFLDILVHVVQPTKLLYISVDGPAP 88
Query: 113 RAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCILPP 172
AK + RSRRF
Sbjct: 89 LAKCIE-------------------QRSRRFSGQG------------------------- 104
Query: 173 EKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
+KE F N IT GT FM L + Y+ +R+N DP W +I + P
Sbjct: 105 KKEVAEGFTKNSITIGTKFMNDLHLKILDYLKERVNRDPIWAMPHIIYDSYHTP 158
>gi|336373303|gb|EGO01641.1| hypothetical protein SERLA73DRAFT_132070 [Serpula lacrymans var.
lacrymans S7.3]
Length = 75
Score = 66.2 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/54 (55%), Positives = 41/54 (75%), Gaps = 1/54 (1%)
Query: 173 EKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
EK K + +DSN ITPGTPFM L+ L Y++ ++N DPGWK ++VI+SDA+VP
Sbjct: 9 EKNKVA-WDSNAITPGTPFMDLLALSLRYWVVQKMNTDPGWKDLQVIISDASVP 61
>gi|207345483|gb|EDZ72294.1| YGL173Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 1409
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 36/51 (70%)
Query: 176 KGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
KG FDSN ITPGT FMA L+ L Y+IHD+++ND W+ +++I S VP
Sbjct: 5 KGEPFDSNSITPGTEFMAKLTKNLQYFIHDKISNDSKWREVQIIFSGHEVP 55
>gi|147771604|emb|CAN69283.1| hypothetical protein VITISV_028678 [Vitis vinifera]
Length = 79
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 36/52 (69%)
Query: 22 YSFASLVSLPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDK 73
Y A + + +E + D S+PNPNGMEFDNLYLDMNGIIHPC HP+ K
Sbjct: 14 YHLAVMDVVEEEPSEDGAEIDVSRPNPNGMEFDNLYLDMNGIIHPCFHPDGK 65
>gi|440796943|gb|ELR18040.1| 5'3' exoribonuclease, putative [Acanthamoeba castellanii str. Neff]
Length = 1117
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 83/174 (47%), Gaps = 18/174 (10%)
Query: 53 FDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAP 112
FD++Y+D+NG IH +E+++ +F +D LF++ R+ +++AIDG A
Sbjct: 42 FDHIYVDLNGYIHTVGR-----RAANEEQLFTLLFRELDGLFKVCVARQSIFLAIDGPAS 96
Query: 113 RAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCILPP 172
AK+ + R S++ R +K A+ +VA + A
Sbjct: 97 AAKL---------ITQRKRRLG---AASKQDRQAKAKAQPQPQVAESEAQTGAPAVSKKR 144
Query: 173 EKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
K+KG F+ +T GTPFM L L ++ RL +DP + ++ +S +VP
Sbjct: 145 VKKKGE-FNLLQVTAGTPFMYRLKNALCFWACSRLQSDPKYHFTRIYISGPDVP 197
>gi|222636726|gb|EEE66858.1| hypothetical protein OsJ_23653 [Oryza sativa Japonica Group]
Length = 628
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/36 (72%), Positives = 30/36 (83%)
Query: 36 GQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPE 71
G +P D +PNPNG++FDNLYLDMNGIIHPC HPE
Sbjct: 32 GAFVPVDLRRPNPNGLKFDNLYLDMNGIIHPCFHPE 67
>gi|115471315|ref|NP_001059256.1| Os07g0238700 [Oryza sativa Japonica Group]
gi|113610792|dbj|BAF21170.1| Os07g0238700 [Oryza sativa Japonica Group]
gi|215695346|dbj|BAG90537.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215715337|dbj|BAG95088.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 182
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/36 (72%), Positives = 30/36 (83%)
Query: 36 GQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPE 71
G +P D +PNPNG++FDNLYLDMNGIIHPC HPE
Sbjct: 32 GAFVPVDLRRPNPNGLKFDNLYLDMNGIIHPCFHPE 67
>gi|237831033|ref|XP_002364814.1| XRN 5'-3' exonuclease N-terminus domain-containing protein
[Toxoplasma gondii ME49]
gi|211962478|gb|EEA97673.1| XRN 5'-3' exonuclease N-terminus domain-containing protein
[Toxoplasma gondii ME49]
gi|221507695|gb|EEE33299.1| hypothetical protein TGVEG_101580 [Toxoplasma gondii VEG]
Length = 2089
Score = 64.7 bits (156), Expect = 3e-08, Method: Composition-based stats.
Identities = 68/263 (25%), Positives = 107/263 (40%), Gaps = 47/263 (17%)
Query: 1 MESTQEGSSVKSTPGRQDSKPYSFASLVSLPQEVNGQKIPFDSSKPNPNGMEFDNLYLDM 60
+ S+ G++V G + P +F S S P V + + + + D L+LD
Sbjct: 607 LASSTTGAAVSRVSGVSQALPPTFPSSASSPATV-ARPVSLAQLRSR---LPIDALFLDF 662
Query: 61 NGIIHPCTH---PEDKPAPKDEDEMMVAIFEC--IDRLFRIVRPRKLLYMAIDGVAPRAK 115
N IIH C+H P P P + ++ C + RL +VRPRKLL + +DGV P AK
Sbjct: 663 NAIIHLCSHGHLPSTLPPPLMHCQPLLLQRVCAYLHRLVSLVRPRKLLVLTLDGVPPLAK 722
Query: 116 MNQPLTV---------YSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLAD 166
+NQ + +V + R RA++ + +E L A+
Sbjct: 723 VNQQRSRRFRQSRDDRLAVRLEDEEDEDEGDGRQGCRRAAQTPTLETDATLNAQETLRAE 782
Query: 167 ----------------------GCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIH 204
+ PP + D+NCI+PGT FM L +I
Sbjct: 783 GREEGDGEGVRKLCGEASSDLFAAVAPP------YLDTNCISPGTTFMTLCEQTLKKFIV 836
Query: 205 DRLNNDPGWKGIK-VILSDANVP 226
+L P W+ ++ V L+ +VP
Sbjct: 837 HKLRTSPLWRNLQCVCLNTHSVP 859
>gi|221487913|gb|EEE26145.1| XRN 5'-3' exonuclease N-terminus domain-containing protein,
putative [Toxoplasma gondii GT1]
Length = 2089
Score = 64.3 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 68/263 (25%), Positives = 107/263 (40%), Gaps = 47/263 (17%)
Query: 1 MESTQEGSSVKSTPGRQDSKPYSFASLVSLPQEVNGQKIPFDSSKPNPNGMEFDNLYLDM 60
+ S+ G++V G + P +F S S P V + + + + D L+LD
Sbjct: 606 LASSTTGAAVSRVSGVSQALPPTFPSSASSPATV-ARPVSLAQLRSR---LPIDALFLDF 661
Query: 61 NGIIHPCTH---PEDKPAPKDEDEMMVAIFEC--IDRLFRIVRPRKLLYMAIDGVAPRAK 115
N IIH C+H P P P + ++ C + RL +VRPRKLL + +DGV P AK
Sbjct: 662 NAIIHLCSHGHLPSTLPPPLMHCQPLLLQRVCAYLHRLVSLVRPRKLLVLTLDGVPPLAK 721
Query: 116 MNQPLTV---------YSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLAD 166
+NQ + +V + R RA++ + +E L A+
Sbjct: 722 VNQQRSRRFRQSRDDRLAVRLEDEEDEDEGDGRQGCRRAAQTPTLETDATLNAQETLRAE 781
Query: 167 ----------------------GCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIH 204
+ PP + D+NCI+PGT FM L +I
Sbjct: 782 GREEGDGEGVRKLCGEASSDLFAAVAPP------YLDTNCISPGTTFMTLCEQTLKKFIV 835
Query: 205 DRLNNDPGWKGIK-VILSDANVP 226
+L P W+ ++ V L+ +VP
Sbjct: 836 HKLRTSPLWRNLQCVCLNTHSVP 858
>gi|159110732|ref|XP_001705612.1| 5'-3' exoribonuclease 2 [Giardia lamblia ATCC 50803]
gi|157433699|gb|EDO77938.1| 5'-3' exoribonuclease 2 [Giardia lamblia ATCC 50803]
Length = 1956
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 92/194 (47%), Gaps = 23/194 (11%)
Query: 37 QKIPFDSSKPNPNGME-FDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMV--AIFECIDRL 93
++ P + P + + DNLY+D N +IH +D P E M+ I + I L
Sbjct: 12 ERYPLAVTTPGASFVSRIDNLYIDFNALIHESIR-KDSYIPFTFTEAMIFGEIADYIQVL 70
Query: 94 FRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRAS-KETAEK 152
+PRK +++A DGVAP AK Q T R ++ + ++ +R S TA
Sbjct: 71 VSTAQPRKRIFIATDGVAPDAKAKQQRT-------RRYMGAYEKIGTKIYRDSIAGTATV 123
Query: 153 IAEVARIREKLLADGC----ILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLN 208
++E + + +A+G LPP+ K + I+PGT FM L + L ++ ++
Sbjct: 124 LSEAELLTSQHIANGNDDDQTLPPQNVKAA------ISPGTLFMDRLHSFLIAFVAKNVD 177
Query: 209 ND-PGWKGIKVILS 221
++ PGW V +S
Sbjct: 178 SEAPGWVQPSVTIS 191
>gi|357472639|ref|XP_003606604.1| 5'-3' exoribonuclease [Medicago truncatula]
gi|355507659|gb|AES88801.1| 5'-3' exoribonuclease [Medicago truncatula]
Length = 909
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/35 (82%), Positives = 29/35 (82%)
Query: 192 MACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
MA LS L YYIH RLNNDPGWK IKVILSDANVP
Sbjct: 1 MAVLSVALQYYIHLRLNNDPGWKNIKVILSDANVP 35
>gi|253744666|gb|EET00835.1| 5'-3' exoribonuclease 2 [Giardia intestinalis ATCC 50581]
Length = 1956
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 88/205 (42%), Gaps = 45/205 (21%)
Query: 37 QKIPFDSSKPNPNGME-FDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVA-IFECIDRLF 94
++ PF + P + + DNLY+D N +IH + K + M+ I + I L
Sbjct: 12 ERYPFAITTPGASFVSRIDNLYIDFNALIHESIRKDSYIPFKFTEAMLFGEIADYIQVLV 71
Query: 95 RIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKET----- 149
V+PRK +++A DGVAP AK Q R RR+ S +
Sbjct: 72 STVQPRKRIFIATDGVAPDAKTKQ-------------------QRVRRYMGSYQKEGSTL 112
Query: 150 -AEKIAEVARI--REKLLADGCI---------LPPEKEKGSHFDSNCITPGTPFMACLSA 197
EKIA A + +LLA I LPP+ K I+PGT FM L +
Sbjct: 113 YKEKIAGTANVLSEAELLASRHIANGNSDDRSLPPQNVK------TAISPGTLFMDRLHS 166
Query: 198 CLHYYIHDRLNND-PGWKGIKVILS 221
L ++ ++++ PGW V +S
Sbjct: 167 FLIAFVAKNVDSEAPGWVHPSVTIS 191
>gi|340055310|emb|CCC49623.1| putative 5'-3' exonuclease XRNC [Trypanosoma vivax Y486]
Length = 871
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 69/166 (41%), Gaps = 43/166 (25%)
Query: 46 PNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAI----FECIDRL-FRIVRPR 100
P+ + + D LY+D+NG+++ E ++ AI F+ +D + R+V+PR
Sbjct: 20 PSNSSPDTDCLYIDVNGLVYQAAALVTSGEGSTEGDIGTAITYRLFDLLDDIILRLVQPR 79
Query: 101 KLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIR 160
L+Y+A+DG++P K+ Q + N+
Sbjct: 80 SLVYLAVDGISPMGKLAQQRSRRRRRRHDNNF---------------------------- 111
Query: 161 EKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDR 206
P + +DSN IT GTPFM+ L+ LH+Y R
Sbjct: 112 ----------PSNHNRNVEWDSNSITVGTPFMSTLTYALHFYCSSR 147
>gi|125557787|gb|EAZ03323.1| hypothetical protein OsI_25466 [Oryza sativa Indica Group]
Length = 205
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/36 (69%), Positives = 29/36 (80%)
Query: 36 GQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPE 71
G +P D +PNPNG++F NLYLDMNGIIHPC HPE
Sbjct: 32 GSFVPVDLRRPNPNGLKFYNLYLDMNGIIHPCFHPE 67
>gi|440798082|gb|ELR19152.1| 5'3' exoribonuclease 2, putative [Acanthamoeba castellanii str.
Neff]
Length = 81
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 40/58 (68%), Gaps = 5/58 (8%)
Query: 51 MEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAID 108
++ DNLYLDMNG++H C + E+E++VA F+ I+ L IVRP+K LYMA+D
Sbjct: 27 VDVDNLYLDMNGVVHQC-----RQGANSEEELIVATFQYIEALVDIVRPKKYLYMAVD 79
>gi|123428648|ref|XP_001307542.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
gi|121889177|gb|EAX94612.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
Length = 498
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 77/184 (41%), Gaps = 49/184 (26%)
Query: 43 SSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKL 102
S+K +P +DNLY+DMN II+ + + +++ I ID L ++ RP+K+
Sbjct: 22 SAKSSP----YDNLYIDMNSIIYYAINKINFKDRLPNQDLVNEIVIKIDELVKMARPKKI 77
Query: 103 LYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREK 162
+ +A+DG P AK++Q RSRR+ S +
Sbjct: 78 ILIAVDGCPPTAKISQ-------------------QRSRRYAYSANYQD----------- 107
Query: 163 LLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSD 222
S FD + + PGT FM L+ L + +++ ND W K+ SD
Sbjct: 108 ---------------SSFDLSNVFPGTEFMINLNKLLESQLLNKITNDEIWSKAKLYYSD 152
Query: 223 ANVP 226
P
Sbjct: 153 VFCP 156
>gi|68068571|ref|XP_676196.1| exoribonuclease [Plasmodium berghei strain ANKA]
gi|56495779|emb|CAH94068.1| exoribonuclease, putative [Plasmodium berghei]
Length = 1136
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 32/47 (68%)
Query: 179 HFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANV 225
H+DSN ITPGT FM LS L Y+I ++ ND WK I VI SDANV
Sbjct: 15 HWDSNIITPGTQFMHELSVALKYFIEHKITNDEKWKKIVVIFSDANV 61
>gi|70933012|ref|XP_737941.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56513750|emb|CAH81056.1| hypothetical protein PC000391.04.0 [Plasmodium chabaudi chabaudi]
Length = 314
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 33/48 (68%)
Query: 178 SHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANV 225
+H+DSN ITPGT FM LS L Y+I ++ ND WK I VI SDANV
Sbjct: 4 NHWDSNIITPGTQFMHELSIALKYFIEHKITNDEKWKKIVVIFSDANV 51
>gi|154285288|ref|XP_001543439.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150407080|gb|EDN02621.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 1327
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 36/51 (70%)
Query: 176 KGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
K FDSNCITPGT FMA L+ L Y+I+ +++ D W+G++++LS VP
Sbjct: 3 KEEAFDSNCITPGTEFMAKLTQQLKYFINKKVSEDVEWQGVEIVLSGHEVP 53
>gi|123410059|ref|XP_001303596.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
gi|121884988|gb|EAX90666.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
Length = 1018
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 74/178 (41%), Gaps = 57/178 (32%)
Query: 54 DNLYLDMNGIIHPC-----THPED-KPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAI 107
+ LY+DMNGI + T ED PA K E IF D L +I RP L+++A+
Sbjct: 30 NRLYIDMNGIFYKALAATGTGNEDLTPALKAE------IFRYTDMLVQICRPTDLIFIAV 83
Query: 108 DGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADG 167
DG AP AK +Q RSRR+ A+++ +
Sbjct: 84 DGPAPNAKASQ-------------------QRSRRYLAARDHS----------------- 107
Query: 168 CILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANV 225
+ FD I+PGT FM L+ L +I D+ D W +VI S + V
Sbjct: 108 ---------MNSFDRTQISPGTVFMDKLNDALMEFIKDKREKDRTWSRPRVIYSSSFV 156
>gi|310831294|ref|YP_003969937.1| putative 5'-3' exonuclease [Cafeteria roenbergensis virus BV-PW1]
gi|309386478|gb|ADO67338.1| putative 5'-3' exonuclease [Cafeteria roenbergensis virus BV-PW1]
Length = 562
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 90/198 (45%), Gaps = 46/198 (23%)
Query: 35 NGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHP------CTHPEDKPAPKDEDEMMVAIFE 88
N +K F ++ N +F L LD N +IHP +P+ K E++M+ E
Sbjct: 13 NYKKNKFVNNINEFNKTDFKWLCLDANCLIHPKCFEVLAENPDFKNLNSLENKMISRCLE 72
Query: 89 CIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKE 148
I++L +V+P + LY+A+DGVAP AK+ Q RSRRF++ +
Sbjct: 73 YIEKLVLLVKPTEGLYIAVDGVAPVAKIKQ-------------------QRSRRFKSVSD 113
Query: 149 TAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLN 208
A + ++ L D +P K ++++ ITPGT FM ++ YI +
Sbjct: 114 NA--------LYDR-LKDKHNIP----KNKFWNNSSITPGTDFMMKITK----YIKEWAT 156
Query: 209 NDPGWKGIKVILSDANVP 226
+ K+I S N P
Sbjct: 157 K----QSYKIIFSSGNTP 170
>gi|123507009|ref|XP_001329319.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
gi|121912273|gb|EAY17096.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
Length = 1017
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 68/173 (39%), Gaps = 45/173 (26%)
Query: 54 DNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPR 113
+N Y+D N II+ D + I +D L + ++P LL++A+DG AP
Sbjct: 30 NNFYIDFNCIIYNSIRLVKPSLDGDNTVLFNEICRYVDLLVQTIKPESLLFIAVDGPAPL 89
Query: 114 AKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCILPPE 173
AK Q RSRRF A+++
Sbjct: 90 AKCAQ-------------------QRSRRFVAARD------------------------- 105
Query: 174 KEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
E G+ F + I+ GT FM L L +I+ R+ NDP W KVI S P
Sbjct: 106 HEDGT-FSTAAISVGTEFMEELHEHLLKFINSRIENDPIWSQPKVIYSSHRTP 157
>gi|402582266|gb|EJW76212.1| hypothetical protein WUBG_12878 [Wuchereria bancrofti]
Length = 410
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/31 (90%), Positives = 29/31 (93%)
Query: 86 IFECIDRLFRIVRPRKLLYMAIDGVAPRAKM 116
IFE IDRLF IVRPRKLLYMAIDGVAPRAK+
Sbjct: 374 IFEYIDRLFAIVRPRKLLYMAIDGVAPRAKV 404
>gi|406601834|emb|CCH46557.1| 5'-3' exoribonuclease 1 [Wickerhamomyces ciferrii]
Length = 491
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 75/185 (40%), Gaps = 54/185 (29%)
Query: 42 DSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRK 101
DS G + DNLY+DMN I H C D + KD ++++A + + + P K
Sbjct: 14 DSECFKNGGKQCDNLYIDMNCIFHICLR--DAKSEKDFKDLILAHLQMVTAAY---CPHK 68
Query: 102 LLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIRE 161
LLY+AIDGV P K+ +G Q +R + + S
Sbjct: 69 LLYIAIDGVPPLGKL------------KG-----QALRRQSYIKS--------------- 96
Query: 162 KLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILS 221
G+ D N +TPGT FM LS + L +KVI+S
Sbjct: 97 ---------------GNGIDPNALTPGTEFMNMLSQFITKCTGSHLPKLSS--NVKVIIS 139
Query: 222 DANVP 226
D+NVP
Sbjct: 140 DSNVP 144
>gi|384246301|gb|EIE19792.1| hypothetical protein COCSUDRAFT_58521 [Coccomyxa subellipsoidea
C-169]
Length = 852
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 67/173 (38%), Gaps = 48/173 (27%)
Query: 53 FDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAP 112
+D+LY+DM +H E+ D D + +D+ R+V P+K + A+DG AP
Sbjct: 25 YDHLYIDMASYLH-----EELRRANDVDHFHKLLHARLDKTLRLVEPQKSVVFALDGPAP 79
Query: 113 RAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCILPP 172
AK + ++R R KE ++ R+
Sbjct: 80 LAK----------------------LLTQRLRRKKEAQKEAKSGPRL------------- 104
Query: 173 EKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANV 225
S +TPGTP MA + L YYI RL W+ + LS A V
Sbjct: 105 -------LSSLGLTPGTPLMAMIQESLTYYICRRLQTS-AWQHLHFELSGATV 149
>gi|389601315|ref|XP_001565132.2| putative 5'-3' exonuclease XRNC [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|322504991|emb|CAM36567.2| putative 5'-3' exonuclease XRNC [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 1065
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 80/177 (45%), Gaps = 37/177 (20%)
Query: 39 IPFDSSKPNPNGMEFDNLYLDMNGIIH------PCTHPEDKPAPKDE--DEMMVAIFECI 90
+P DS+ N DNL++D+N ++ TH + + DE D ++ +F+ +
Sbjct: 19 MPADSAVTNYIRESTDNLFIDLNSFLYQAATIITATHRSHRFSSVDEVEDVVLRKLFDLL 78
Query: 91 DRLF-RIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKET 149
D L +V+P+ L+Y+A+DGV+P KM+Q R S W S F E
Sbjct: 79 DDLVSNLVQPKALVYIAVDGVSPLGKMSQQRARRRRGARRQP-SAWP---SSSFH-HHEP 133
Query: 150 AEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDR 206
A I ++ +DSNCI+ GT FMA ++ LH+Y R
Sbjct: 134 AGNINDL-----------------------WDSNCISVGTRFMAKVTEALHFYAVSR 167
>gi|393910764|gb|EJD76029.1| CBR-XRN-2 protein [Loa loa]
Length = 764
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/35 (65%), Positives = 28/35 (80%)
Query: 192 MACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
MA L+ L YY+H RLN+DPGW+ + VILSDANVP
Sbjct: 1 MARLAVALRYYVHQRLNSDPGWEKVAVILSDANVP 35
>gi|449689861|ref|XP_004212165.1| PREDICTED: 5'-3' exoribonuclease 1-like, partial [Hydra
magnipapillata]
Length = 99
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 39/67 (58%), Gaps = 13/67 (19%)
Query: 30 LPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHP--EDKPAPKDEDEMMVAIF 87
L Q + KIP EFDNLY+DMNGIIHPC+HP ED E+E+M+ IF
Sbjct: 33 LSQTIREHKIP-----------EFDNLYIDMNGIIHPCSHPNDEDPHFQITEEEIMMNIF 81
Query: 88 ECIDRLF 94
+ I+ +
Sbjct: 82 DYIELML 88
>gi|72392625|ref|XP_847113.1| 5'-3' exonuclease XRNC [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62176006|gb|AAX70128.1| 5'-3' exonuclease XRNC, putative [Trypanosoma brucei]
gi|70803143|gb|AAZ13047.1| 5'-3' exonuclease XRNC, putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 868
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 70/165 (42%), Gaps = 44/165 (26%)
Query: 46 PNPNGMEFDNLYLDMNGIIHPCTHPEDKPA--PKD-EDEMMVAIFECIDRL-FRIVRPRK 101
P+ + + D LY+D+NG+++ P D E ++ +F+ +D + R+VRPR
Sbjct: 20 PSNSNVSADCLYIDVNGLVYQAATLATSGGGDPADIEAAILRRLFDLLDDIVLRLVRPRS 79
Query: 102 LLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIRE 161
L+Y+A+DG++P K+ A+ R
Sbjct: 80 LVYLAVDGISPMGKL----------------------------------------AQQRS 99
Query: 162 KLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDR 206
+ P + + +DSN I+ GT FM+ L+ LH+Y R
Sbjct: 100 RRRRRRRQDPHSHVRTTEWDSNSISVGTSFMSSLTDALHFYCASR 144
>gi|261330307|emb|CBH13291.1| 5'-3' exonuclease XRNC, putative [Trypanosoma brucei gambiense
DAL972]
Length = 960
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 70/165 (42%), Gaps = 44/165 (26%)
Query: 46 PNPNGMEFDNLYLDMNGIIHPCTHPEDKPA--PKD-EDEMMVAIFECIDRL-FRIVRPRK 101
P+ + + D LY+D+NG+++ P D E ++ +F+ +D + R+VRPR
Sbjct: 112 PSNSNVSADCLYIDVNGLVYQAATLATSGGGDPADIEAAILRRLFDLLDDIVLRLVRPRS 171
Query: 102 LLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIRE 161
L+Y+A+DG++P K+ A+ R
Sbjct: 172 LVYLAVDGISPMGKL----------------------------------------AQQRS 191
Query: 162 KLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDR 206
+ P + + +DSN I+ GT FM+ L+ LH+Y R
Sbjct: 192 RRRRRRRQDPHSHVRTTEWDSNSISVGTSFMSSLTDALHFYCASR 236
>gi|340501949|gb|EGR28676.1| hypothetical protein IMG5_170600 [Ichthyophthirius multifiliis]
Length = 698
Score = 54.3 bits (129), Expect = 4e-05, Method: Composition-based stats.
Identities = 44/182 (24%), Positives = 76/182 (41%), Gaps = 42/182 (23%)
Query: 54 DNLYLDMNGIIHPCTHPEDKP---APKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGV 110
D LY+D+N + + P+ D++ I I+ + +++ P+ +Y+ +DG
Sbjct: 31 DCLYIDVNSFCYQYIKDDLNQYLLNPQSLDQIYQNILTHIESIIQLIEPQSQVYLMMDGT 90
Query: 111 APRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCIL 170
PRAKMNQ R RRF A K + + +E G +
Sbjct: 91 CPRAKMNQ-------------------QRQRRFHAQK-------NLNQTKEDFKNQGIQI 124
Query: 171 PPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLN--------NDPGWKGIKVILSD 222
K SN ++PGTPFM L+ + + ++ D +K + +I+SD
Sbjct: 125 -----KEQTVPSNSVSPGTPFMFELNKRIREHFEKKIQEEQPLNEKTDFTYKRLHIIISD 179
Query: 223 AN 224
+N
Sbjct: 180 SN 181
>gi|123469088|ref|XP_001317758.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
gi|121900500|gb|EAY05535.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
Length = 1020
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 76/191 (39%), Gaps = 46/191 (24%)
Query: 37 QKIPFDSSKPN-PNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFR 95
Q+ P + N P + D Y+D N II+ + ++ + +D L +
Sbjct: 12 QRYPLVRRRMNDPARPKIDYFYIDFNCIIYNALRSISMSSGGTILQLFNEVCRYLDVLVQ 71
Query: 96 IVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAE 155
+++P+ +L++++DG AP AK Q RSRRF A++++
Sbjct: 72 VIKPQIVLFISVDGPAPFAKCTQ-------------------QRSRRFVAARDSV----- 107
Query: 156 VARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKG 215
G+ F++ I+ GT FM L L Y ++N+D W
Sbjct: 108 ---------------------GAAFNTTAISVGTTFMEDLHQHLLEYFKRKVNSDRAWST 146
Query: 216 IKVILSDANVP 226
++I S P
Sbjct: 147 PQLIYSSHRTP 157
>gi|170110921|ref|XP_001886665.1| predicted protein [Laccaria bicolor S238N-H82]
gi|170111147|ref|XP_001886778.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164638343|gb|EDR02621.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164638456|gb|EDR02734.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 59
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 36/50 (72%)
Query: 68 THPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMN 117
T+ ED E++++ +IF +D LF ++P+K L++A+DGVAPRAKMN
Sbjct: 10 TNDEDAHFRLLEEQILSSIFTYMDHLFGKIKPKKFLFLAVDGVAPRAKMN 59
>gi|401422387|ref|XP_003875681.1| putative 5'-3' exonuclease XRNC [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322491920|emb|CBZ27193.1| putative 5'-3' exonuclease XRNC [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 1070
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 77/177 (43%), Gaps = 37/177 (20%)
Query: 39 IPFDSSKPNPNGMEFDNLYLDMNGIIH------PCTHPEDKPAPKDE--DEMMVAIFECI 90
+P DS+ + DNL++D+N ++ TH + DE D ++ +F+ +
Sbjct: 19 MPADSAVTDYIRRSTDNLFIDLNSFLYQAATIITATHRTHRFHSVDEVEDVVLRKLFDLL 78
Query: 91 DRL-FRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKET 149
D L +V+P+ L+Y+A+DGV+P KM+Q S FR E
Sbjct: 79 DDLVMNLVQPKALVYIAVDGVSPLGKMSQQRARRRRG----ARRQSSASPSSSFR-HHEP 133
Query: 150 AEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDR 206
A I ++ +DSNCI+ GT FMA ++ LH+Y R
Sbjct: 134 AGNINDL-----------------------WDSNCISVGTRFMAKVTEALHFYAVSR 167
>gi|342182575|emb|CCC92054.1| putative exoribonuclease 2 [Trypanosoma congolense IL3000]
Length = 867
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 70/165 (42%), Gaps = 44/165 (26%)
Query: 46 PNPNGMEFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVA-IFECIDRL-FRIVRPRK 101
P+ + D LY+D+NG+++ D D ++ +F+ +D + ++VRPR
Sbjct: 20 PSNTVLSTDCLYIDVNGLVYQAAALVTSGGVDCTDIDAAIIQRVFDLLDDIVLKLVRPRS 79
Query: 102 LLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIRE 161
L+Y+A+DGV+P K++Q + + +S
Sbjct: 80 LVYLAVDGVSPMGKLSQQRSRRRRRRRQDPHS---------------------------- 111
Query: 162 KLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDR 206
+ G+ +DSN I+ GT FM+ L+ LH+Y R
Sbjct: 112 ------------QAHGTEWDSNSISVGTSFMSSLANALHFYCVSR 144
>gi|123490419|ref|XP_001325606.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
gi|121908508|gb|EAY13383.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
Length = 939
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 74/185 (40%), Gaps = 48/185 (25%)
Query: 42 DSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRK 101
D SKP FD Y+D N II+ + + + D ++ I +D + +IVRP K
Sbjct: 23 DVSKPT-----FDCFYIDFNAIIYFALSYYNPESEGNFDGIITEIIRYLDTIIQIVRPTK 77
Query: 102 LLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIRE 161
L+Y+++DG P AK +R+R R + + + ++I+
Sbjct: 78 LIYLSVDGTPPYAK---------------------CVRNRSSRLAGFMKNQKQDKSQIQF 116
Query: 162 KLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILS 221
+++A G+ FM L L I +++ D W K I S
Sbjct: 117 EIVA----------------------GSVFMEKLHQELIKTIENKVKTDIAWSTPKFIYS 154
Query: 222 DANVP 226
+VP
Sbjct: 155 SYHVP 159
>gi|298715566|emb|CBJ28119.1| 5\'->3\' exoribonuclease, putative [Ectocarpus siliculosus]
Length = 813
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 70/174 (40%), Gaps = 52/174 (29%)
Query: 53 FDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAP 112
FD++ +DMN I+H +DED + IF ++ + PRK + A DG AP
Sbjct: 46 FDHVCIDMNQILHVAMR-----KARDEDHAIRRIFRDVNLTLKRCPPRKSVVFAFDGSAP 100
Query: 113 RAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCILPP 172
AK+ + RSRR + + + +++ +
Sbjct: 101 LAKL-------------------LVQRSRRENSKRNSKYRMSALH--------------- 126
Query: 173 EKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANVP 226
++PGT FM +++ + YY P ++G+K +S ANVP
Sbjct: 127 ------------LSPGTKFMEDVASAMEYYAFQECTR-PCYQGVKFYISGANVP 167
>gi|15078725|ref|NP_149475.1| 012L [Invertebrate iridescent virus 6]
gi|82013011|sp|Q9QSK5.1|EXON_IIV6 RecName: Full=Putative exonuclease 012L
gi|5725643|gb|AAD48147.1|AF083915_1 012L [Invertebrate iridescent virus 6]
Length = 624
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 70/177 (39%), Gaps = 47/177 (26%)
Query: 49 NGMEFDNLYLDMNGIIH----------PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVR 98
N D L +DMNGIIH + P++ K ++ + IDR+ +
Sbjct: 26 NSQCIDVLLIDMNGIIHNSAQEVYGYGSFSFPKENACDK---KVYSLVCRQIDRMVIQFK 82
Query: 99 PRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVAR 158
P++L+ + IDGVAPR+K Q R RRF A+ + + E
Sbjct: 83 PKELI-LCIDGVAPRSKQIQ-------------------QRQRRFLAAHDRKKPGTEFN- 121
Query: 159 IREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKG 215
K S FDSN I+PGT FM L + IH + P + G
Sbjct: 122 -----------FDCNKGNTSKFDSNSISPGTEFMHNLGRYID--IHIKKKQKPAFTG 165
>gi|357289551|gb|AET72864.1| 5'-3' exoribonuclease [Phaeocystis globosa virus 12T]
gi|357292303|gb|AET73639.1| 5'-3' exoribonuclease [Phaeocystis globosa virus 14T]
Length = 526
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 85/207 (41%), Gaps = 57/207 (27%)
Query: 21 PYSFASLVSLPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCT-HPEDKPAPKDE 79
PY FA+L+ +KI D S NLY+D N II+ + + E
Sbjct: 4 PYYFANLIR-----THKKIVIDLSSIG----NIQNLYIDSNSIIYDAIDFSLFQNKSQFE 54
Query: 80 DEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYSVLYDRGNYSTWQLMR 139
+ ++ + + I+ + ++P K + +A DGV P AK+NQ +
Sbjct: 55 NHIIQTVIDKIELIITTIKPTKNIILAFDGVPPFAKLNQ-------------------QK 95
Query: 140 SRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMACLSACL 199
+RR++ S ++ L + K +D+ ITPGT FM L+ L
Sbjct: 96 NRRYKTSYQST------------LFS----------KNVPWDTTAITPGTEFMDKLNDTL 133
Query: 200 HYYIHDRLNNDPGWKGIKVILSDANVP 226
+ D+ +K +ILS ++P
Sbjct: 134 KNHFGDK------YKSNNLILSLTDIP 154
>gi|402466304|gb|EJW01825.1| hypothetical protein EDEG_00349 [Edhazardia aedis USNM 41457]
Length = 1356
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 33/56 (58%)
Query: 170 LPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANV 225
L E + +D+N ITPGT FM + +H YI ++L ND W+ ++VI S + V
Sbjct: 445 LNDESSDYAEWDTNAITPGTYFMEKVDKTIHNYIEEKLRNDKEWRNMRVIYSSSKV 500
>gi|401412103|ref|XP_003885499.1| putative XRN 5'-3' exonuclease N-terminus domain-containing protein
[Neospora caninum Liverpool]
gi|325119918|emb|CBZ55471.1| putative XRN 5'-3' exonuclease N-terminus domain-containing protein
[Neospora caninum Liverpool]
Length = 1754
Score = 47.8 bits (112), Expect = 0.004, Method: Composition-based stats.
Identities = 29/71 (40%), Positives = 39/71 (54%), Gaps = 5/71 (7%)
Query: 51 MEFDNLYLDMNGIIHPCTH---PEDKPAPKDEDEMMVAIFEC--IDRLFRIVRPRKLLYM 105
+ D L+LD N IIH C+H P P P ++ C + RL +VRPRKLL +
Sbjct: 422 LPIDALFLDFNAIIHLCSHGHLPSTLPPPLARFLPLLLQRVCGYLHRLVSLVRPRKLLVL 481
Query: 106 AIDGVAPRAKM 116
+DGV P AK+
Sbjct: 482 TLDGVPPLAKV 492
>gi|303289645|ref|XP_003064110.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454426|gb|EEH51732.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 335
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 53 FDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAP 112
+D++Y+D+N ++H H K E+ +F +DR R+ RP+ + +A+DG AP
Sbjct: 133 YDHVYVDVNNVLHVAAHHT-----KTEEAFFKKLFALLDRTMRLTRPQYTVTLALDGPAP 187
Query: 113 RAK 115
AK
Sbjct: 188 IAK 190
>gi|330843277|ref|XP_003293585.1| hypothetical protein DICPUDRAFT_158467 [Dictyostelium purpureum]
gi|325076072|gb|EGC29891.1| hypothetical protein DICPUDRAFT_158467 [Dictyostelium purpureum]
Length = 727
Score = 46.6 bits (109), Expect = 0.007, Method: Composition-based stats.
Identities = 43/171 (25%), Positives = 75/171 (43%), Gaps = 48/171 (28%)
Query: 54 DNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPR 113
D++ D+N +++ P ++ I E +D+ R PR+ + ++DG AP
Sbjct: 28 DHICFDLNSVLYSLKKPTVTN--------ILNIEEKLDQEIRKFNPRQSAFFSLDGPAPV 79
Query: 114 AKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCILPPE 173
+KM L + R + + E E + A I++K ++D +
Sbjct: 80 SKM-------------------PLQKENRIKRNSEVIENLKYFA-IQKKEISD------D 113
Query: 174 KEK------------GSHFDSNCITPGTPFMACLSACLHYYI-HDRLNNDP 211
K+K G+ + SN I+PGT FM C+ + L+YY+ RL N P
Sbjct: 114 KDKHLLEFVDDNLIEGTEYRSN-ISPGTRFMGCIKSFLYYYLTKQRLGNFP 163
>gi|449017059|dbj|BAM80461.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain
10D]
Length = 695
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/175 (19%), Positives = 73/175 (41%), Gaps = 44/175 (25%)
Query: 53 FDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAP 112
FD++ D+N +IH ++ D+ + +F +D + R+ P+K +++A DG AP
Sbjct: 30 FDHVLFDLNQLIHLAAR-----VARNRDQFFIRLFRWLDNILRLCVPKKSVFIAFDGPAP 84
Query: 113 RAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCILPP 172
AK+ V R +++ SR+ ++
Sbjct: 85 LAKL--------VTQKRR-----RVLESRKLHRTR------------------------- 106
Query: 173 EKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNNDPG-WKGIKVILSDANVP 226
++++ D ++PGT M + +Y+ RL + ++ ++ ++S VP
Sbjct: 107 KRKRRCGVDVLSLSPGTELMQLTLQAVEFYVCSRLQSKRHLYQNVRFVVSGPTVP 161
>gi|407868229|gb|EKG08789.1| 5'-3' exonuclease XRNC, putative [Trypanosoma cruzi]
Length = 879
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 4/69 (5%)
Query: 54 DNLYLDMNGIIHPCTHPEDKPAPKDED---EMMVAIFECIDRL-FRIVRPRKLLYMAIDG 109
D LY+D+NG+++ D ++ +F+ ID + R+VRPR L+Y+A+DG
Sbjct: 28 DCLYIDVNGLVYQAAALATASEASAVDIDAAILRKLFDIIDDIVLRLVRPRFLVYLAVDG 87
Query: 110 VAPRAKMNQ 118
++P K+ Q
Sbjct: 88 ISPMGKLAQ 96
>gi|71656489|ref|XP_816791.1| 5'-3' exonuclease XRNC [Trypanosoma cruzi strain CL Brener]
gi|70881942|gb|EAN94940.1| 5'-3' exonuclease XRNC, putative [Trypanosoma cruzi]
Length = 282
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 4/69 (5%)
Query: 54 DNLYLDMNGIIHPCTHPEDKPAPKDED---EMMVAIFECIDRL-FRIVRPRKLLYMAIDG 109
D LY+D+NG+++ D ++ +F+ ID + R+VRPR L+Y+A+DG
Sbjct: 28 DCLYIDVNGLVYQAAALATASEASAVDIDAAILRKLFDIIDDIVLRLVRPRFLVYLAVDG 87
Query: 110 VAPRAKMNQ 118
++P K+ Q
Sbjct: 88 ISPMGKLAQ 96
>gi|327409880|ref|YP_004347300.1| XRN1 5'-3' exoribonuclease [Lausannevirus]
gi|326785054|gb|AEA07188.1| XRN1 5'-3' exoribonuclease [Lausannevirus]
Length = 495
Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 35/79 (44%), Gaps = 14/79 (17%)
Query: 54 DNLYLDMNGIIHPCTHP--------------EDKPAPKDEDEMMVAIFECIDRLFRIVRP 99
DNLY+D +H C +D + E E+ ++ I RL + V P
Sbjct: 39 DNLYVDAVCFVHTCAQDIYGYGKNISLSDTFKDMTEKQKEQELFRSVRNAIFRLTKYVTP 98
Query: 100 RKLLYMAIDGVAPRAKMNQ 118
K Y+ DGVAP AK NQ
Sbjct: 99 TKKFYVVFDGVAPIAKQNQ 117
>gi|71665017|ref|XP_819483.1| 5'-3' exonuclease XRNC [Trypanosoma cruzi strain CL Brener]
gi|70884786|gb|EAN97632.1| 5'-3' exonuclease XRNC, putative [Trypanosoma cruzi]
Length = 880
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 40/69 (57%), Gaps = 4/69 (5%)
Query: 54 DNLYLDMNGIIHPCTHPEDKPAPKDED---EMMVAIFECIDRL-FRIVRPRKLLYMAIDG 109
D LY+D+NG+++ D ++ +F+ +D + R+VRPR L+Y+A+DG
Sbjct: 28 DCLYIDVNGLVYQAAALATASEASAVDIDAAILRKLFDILDDIVLRLVRPRFLVYLAVDG 87
Query: 110 VAPRAKMNQ 118
++P K+ Q
Sbjct: 88 ISPMGKLAQ 96
>gi|407394522|gb|EKF26964.1| 5'-3' exonuclease XRNC, putative [Trypanosoma cruzi marinkellei]
Length = 367
Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 40/69 (57%), Gaps = 4/69 (5%)
Query: 54 DNLYLDMNGIIHPCTHPEDKPAPKDED---EMMVAIFECIDRL-FRIVRPRKLLYMAIDG 109
D LY+D+NG+++ D ++ +F+ +D + R+VRPR L+Y+A+DG
Sbjct: 28 DCLYIDVNGLVYQAAALATASEASAVDIDAAILRKLFDILDDIVLRLVRPRFLVYLAVDG 87
Query: 110 VAPRAKMNQ 118
++P K+ Q
Sbjct: 88 ISPMGKLAQ 96
>gi|339898255|ref|XP_003392512.1| putative 5'-3' exonuclease XRNC [Leishmania infantum JPCM5]
gi|321399477|emb|CBZ08676.1| putative 5'-3' exonuclease XRNC [Leishmania infantum JPCM5]
Length = 1068
Score = 44.7 bits (104), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 49/88 (55%), Gaps = 9/88 (10%)
Query: 39 IPFDSSKPNPNGMEFDNLYLDMNGIIH------PCTHPEDKPAPKDE--DEMMVAIFECI 90
+P DS+ + DNL++D+N ++ TH + DE D ++ +F+ +
Sbjct: 19 MPADSAVTDYIRESTDNLFIDLNSFLYQAATIITATHRSLRFNSVDEVEDVVLRKLFDLL 78
Query: 91 DRL-FRIVRPRKLLYMAIDGVAPRAKMN 117
D L +V+P+ L+Y+A+DGV+P KM+
Sbjct: 79 DDLVMNLVQPKALVYIAVDGVSPLGKMS 106
>gi|398015544|ref|XP_003860961.1| 5'-3' exonuclease XRNC, putative [Leishmania donovani]
gi|322499185|emb|CBZ34256.1| 5'-3' exonuclease XRNC, putative [Leishmania donovani]
Length = 1068
Score = 44.7 bits (104), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 49/88 (55%), Gaps = 9/88 (10%)
Query: 39 IPFDSSKPNPNGMEFDNLYLDMNGIIH------PCTHPEDKPAPKDE--DEMMVAIFECI 90
+P DS+ + DNL++D+N ++ TH + DE D ++ +F+ +
Sbjct: 19 MPADSAVTDYIRESTDNLFIDLNSFLYQAATIITATHRSLRFDSVDEVEDVVLRKLFDLL 78
Query: 91 DRL-FRIVRPRKLLYMAIDGVAPRAKMN 117
D L +V+P+ L+Y+A+DGV+P KM+
Sbjct: 79 DDLVMNLVQPKALVYIAVDGVSPLGKMS 106
>gi|428163037|gb|EKX32131.1| hypothetical protein GUITHDRAFT_121693 [Guillardia theta CCMP2712]
Length = 651
Score = 43.9 bits (102), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 83/221 (37%), Gaps = 61/221 (27%)
Query: 5 QEGSSVKSTPGRQDSKPYSFASLVSLPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGII 64
Q +V S+ G+ SK + AS P+ V IP P+ +FD++ DMN ++
Sbjct: 8 QSTRAVLSSKGKAASKRWLEASF---PKCV----IPISPRSPS---FKFDHVLFDMNDML 57
Query: 65 HPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQPLTVYS 124
H C K+ + +F +D RI P K + + DG P AK+ + +
Sbjct: 58 HTCAR-----NCKNSSAVCKRVFRQVDSYLRIFTPGKSVVLCFDGPGPIAKIPKQV---- 108
Query: 125 VLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNC 184
E+ EK +VA S DS
Sbjct: 109 -----------------------ESREKRTKVA-------------------SSTLDSID 126
Query: 185 ITPGTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANV 225
ITPGT FM+ + ++ L G++ I LS ++V
Sbjct: 127 ITPGTRFMSEVRELCFAHVVQSLEQRGGYRDISFYLSCSDV 167
>gi|157869656|ref|XP_001683379.1| putative 5'-3' exonuclease XRNC [Leishmania major strain Friedlin]
gi|68126444|emb|CAJ04205.1| putative 5'-3' exonuclease XRNC [Leishmania major strain Friedlin]
Length = 1068
Score = 43.9 bits (102), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 9/88 (10%)
Query: 39 IPFDSSKPNPNGMEFDNLYLDMNGIIH------PCTHPEDKPAPKDEDEMMV--AIFECI 90
+P DS+ + DNL++D+N ++ TH + DE E V +F+ +
Sbjct: 19 MPADSAVTDYIRESTDNLFIDLNSFLYQAATIITATHRSLRFNSVDEVENAVLRKLFDLL 78
Query: 91 DRL-FRIVRPRKLLYMAIDGVAPRAKMN 117
D L +V+P+ L+Y+A+DGV+P KM+
Sbjct: 79 DDLVMNLVQPKALVYIAVDGVSPLGKMS 106
>gi|118373913|ref|XP_001020149.1| XRN 5'-3' exonuclease N-terminus family protein [Tetrahymena
thermophila]
gi|89301916|gb|EAR99904.1| XRN 5'-3' exonuclease N-terminus family protein [Tetrahymena
thermophila SB210]
Length = 874
Score = 43.9 bits (102), Expect = 0.056, Method: Composition-based stats.
Identities = 57/253 (22%), Positives = 87/253 (34%), Gaps = 94/253 (37%)
Query: 37 QKIPFDSSKPNPNGME--FDNLYLDMNGIIHPCTHPEDK----PAPKDEDEMMVAIFECI 90
+K P+ K NG + D LY+D+NGI + E + PK + + + + I
Sbjct: 12 RKYPYQVRKVRRNGRKKHIDCLYIDVNGICYQYARDEHQYNYLLKPKSLETIFKQVIDHI 71
Query: 91 DRLFRIVRPRKLLYMAI------------------------------------------D 108
D + +V P+ +Y+ + D
Sbjct: 72 DSIIELVEPQLQVYLMLANPFQPNLSGFESYFCMMRFKKNQFQLKLFAIFYIQKIILKKD 131
Query: 109 GVAPRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGC 168
G PRAKMNQ R RRF A ++++L G
Sbjct: 132 GPCPRAKMNQ-------------------QRQRRFHAEMHHLT-------LKDELKKHGF 165
Query: 169 ILPPEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRL---------------NNDPGW 213
+ E +N I PGTPFM L+ L YI R+ + +
Sbjct: 166 DVKEET-----VPNNSIAPGTPFMYELNEQLRRYIETRIALSNKAMTDGEADHKEHQVSY 220
Query: 214 KGIKVILSDANVP 226
K ++ ILSD+N P
Sbjct: 221 KKLQFILSDSNAP 233
>gi|71656083|ref|XP_816594.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70881733|gb|EAN94743.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 524
Score = 42.7 bits (99), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 14/91 (15%)
Query: 27 LVSLPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAI 86
L S P V G D+S P D+L LDMNGI+H + + ++++++
Sbjct: 15 LCSAPPSVTG-----DTSIITP-----DHLLLDMNGIVHGAIEGPHFLSMQTIQDVLLSV 64
Query: 87 FECIDRLFRIVRPRKLLYMAIDGVAPRAKMN 117
RL R+ P+K L + DG AP AK+
Sbjct: 65 ----KRLLRLFPPKKTLVLVFDGAAPTAKLK 91
>gi|407847929|gb|EKG03484.1| hypothetical protein TCSYLVIO_005474 [Trypanosoma cruzi]
Length = 524
Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 14/91 (15%)
Query: 27 LVSLPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAI 86
L S P V G D+S P D+L LDMNGI+H + + ++++++
Sbjct: 15 LCSAPPSVTG-----DTSIITP-----DHLLLDMNGIVHGAIEGPHFLSMQTIQDVLLSV 64
Query: 87 FECIDRLFRIVRPRKLLYMAIDGVAPRAKMN 117
RL R+ P+K L + DG AP AK+
Sbjct: 65 ----KRLLRLFPPKKTLVLVFDGAAPTAKLK 91
>gi|412985578|emb|CCO19024.1| predicted protein [Bathycoccus prasinos]
Length = 1002
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Query: 53 FDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAP 112
FD++Y+D+N ++H H K E +F + + R RPR + A+DG AP
Sbjct: 71 FDHVYVDVNNVLHVAAH-----HTKTESAFYKKLFGLLTGIIRRTRPRHSITFALDGPAP 125
Query: 113 RAK 115
AK
Sbjct: 126 MAK 128
>gi|71648999|ref|XP_813262.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70878131|gb|EAN91411.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 524
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 14/92 (15%)
Query: 26 SLVSLPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVA 85
L S P V G D+S P D+L LDMNGI+H + + +++++
Sbjct: 14 GLCSAPPSVTG-----DTSIITP-----DHLLLDMNGIVHGAIEGPHFLSMQTIQDVLLS 63
Query: 86 IFECIDRLFRIVRPRKLLYMAIDGVAPRAKMN 117
+ RL R+ P+K L + DG AP AK+
Sbjct: 64 V----KRLLRLFPPKKTLVIVFDGAAPTAKLK 91
>gi|124297173|gb|AAI31776.1| XRN2 protein [Homo sapiens]
Length = 55
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/28 (64%), Positives = 22/28 (78%)
Query: 31 PQEVNGQKIPFDSSKPNPNGMEFDNLYL 58
P+E NG KIP D+SKPNPN +EFD +L
Sbjct: 26 PKECNGVKIPVDASKPNPNDVEFDKTHL 53
>gi|307109378|gb|EFN57616.1| hypothetical protein CHLNCDRAFT_17718, partial [Chlorella
variabilis]
Length = 50
Score = 41.2 bits (95), Expect = 0.29, Method: Composition-based stats.
Identities = 20/40 (50%), Positives = 27/40 (67%)
Query: 79 EDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQ 118
++EM I I RL ++RP +LL +A+DGVAP AKM Q
Sbjct: 2 QEEMFCEIDLYIHRLVGVLRPTQLLLVAMDGVAPAAKMAQ 41
>gi|255077408|ref|XP_002502345.1| predicted protein [Micromonas sp. RCC299]
gi|226517610|gb|ACO63603.1| predicted protein [Micromonas sp. RCC299]
Length = 710
Score = 41.2 bits (95), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 49/105 (46%), Gaps = 11/105 (10%)
Query: 17 QDSKPYSFASLVS-LPQEVNGQKIPFDSSKPNPNGM-----EFDNLYLDMNGIIHPCTHP 70
QD+ SF S LP+ + + D+ + G +D++Y+D+N ++H H
Sbjct: 2 QDAYADSFTSAFKPLPRRADKGRDSRDAGDGDNEGRVGVPGSYDHVYIDVNNVLHVAAHH 61
Query: 71 EDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAK 115
K E + +F +D R +P+ + +A+DG AP AK
Sbjct: 62 T-----KTEKAFFMKLFALLDLNMRRTKPQYTVTLALDGPAPIAK 101
>gi|387219405|gb|AFJ69411.1| 5'-3' exoribonuclease 1, partial [Nannochloropsis gaditana CCMP526]
Length = 487
Score = 41.2 bits (95), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 63/159 (39%), Gaps = 52/159 (32%)
Query: 52 EFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVA 111
EFD++ +D+N + H +DED + + + + R R++R +K + +A DG A
Sbjct: 91 EFDHVLIDVNQLTHMAAR-----KARDEDHAIRRLLKELGRTLRVLRAQKSVVIAFDGPA 145
Query: 112 PRAKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCILP 171
P AK ++ R+ RA+
Sbjct: 146 PLAK---------------------IITQRKRRAA------------------------- 159
Query: 172 PEKEKGSHFDSNCITPGTPFMACLSACLHYYIHDRLNND 210
EK+ + +S ++PGT FM + + + H RL +D
Sbjct: 160 -EKDAKTPLNSLHLSPGTSFMRRAAEAVIDFCHTRLESD 197
>gi|407408677|gb|EKF32025.1| hypothetical protein MOQ_004135 [Trypanosoma cruzi marinkellei]
Length = 523
Score = 40.8 bits (94), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 8/78 (10%)
Query: 44 SKPNPNG----MEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRP 99
S PN G + D+L LDMNG++H + + ++++++ RL R+ P
Sbjct: 17 STPNVTGDTSIITPDHLLLDMNGVVHGAIKGPRFSSMQTIQDVLLSVM----RLLRLFPP 72
Query: 100 RKLLYMAIDGVAPRAKMN 117
+K L + DG AP K+
Sbjct: 73 KKTLVLVFDGAAPTTKLK 90
>gi|145355619|ref|XP_001422056.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582295|gb|ABP00350.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 780
Score = 40.4 bits (93), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 7/86 (8%)
Query: 30 LPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFEC 89
L +E NG + K P +D++Y+D+N ++H H + E +F
Sbjct: 10 LQREFNGAFLRGGRHKRRPK--RYDHVYVDVNNLLHVAAHNTNS-----ERSFFKKLFTL 62
Query: 90 IDRLFRIVRPRKLLYMAIDGVAPRAK 115
+D PR + +A+DG AP AK
Sbjct: 63 LDNRLTKTNPRHSVTLALDGPAPMAK 88
>gi|66823153|ref|XP_644931.1| hypothetical protein DDB_G0272997 [Dictyostelium discoideum AX4]
gi|60473188|gb|EAL71136.1| hypothetical protein DDB_G0272997 [Dictyostelium discoideum AX4]
Length = 1114
Score = 38.9 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 37/156 (23%), Positives = 63/156 (40%), Gaps = 10/156 (6%)
Query: 54 DNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPR 113
D++Y+D+N +H D E + + ID + R VR + ++ IDG PR
Sbjct: 26 DHVYIDLNNYLHKSVKRGDNSKLNTEVNVFRILKSFIDGILRKVRVKHSVFFGIDGPGPR 85
Query: 114 AKMNQPLTVYSVLYDRGNYSTWQLMRSRRFRASKETAEKIAEVARIREKLLADGCILPPE 173
+KM +L + + + F + ++ + + + L D L
Sbjct: 86 SKM--------ILQRERRLKNGNIDKLKYFINRNKEQQQQQQQQQQQSPQLHDYDYLNEN 137
Query: 174 KEKG--SHFDSNCITPGTPFMACLSACLHYYIHDRL 207
K S F + TPGT FM L L +Y ++L
Sbjct: 138 DLKSFDSSFSTLEFTPGTTFMGKLKDFLIFYTKNKL 173
>gi|389600805|ref|XP_001563643.2| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|322504524|emb|CAM37679.2| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 993
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 54 DNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLF-RIVRPRKLLYMAIDGVAP 112
D++ +DMN I+H C H + K + +++ + E + L +V PR+ L + DG AP
Sbjct: 104 DHVLVDMNCIVHSCFHHQSSE-NKTKKQLIQEVLERLRVLVTEVVAPRQSLSICFDGPAP 162
Query: 113 RAKMN 117
AK+
Sbjct: 163 IAKLQ 167
>gi|47198701|emb|CAF89019.1| unnamed protein product [Tetraodon nigroviridis]
Length = 220
Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 23/38 (60%)
Query: 188 GTPFMACLSACLHYYIHDRLNNDPGWKGIKVILSDANV 225
GT FMA L L Y++H +L+ D W+ ++V LS V
Sbjct: 1 GTDFMARLQEQLEYFVHSKLSTDKLWQNVRVYLSGHEV 38
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.135 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,781,449,838
Number of Sequences: 23463169
Number of extensions: 156304908
Number of successful extensions: 327704
Number of sequences better than 100.0: 932
Number of HSP's better than 100.0 without gapping: 892
Number of HSP's successfully gapped in prelim test: 40
Number of HSP's that attempted gapping in prelim test: 324903
Number of HSP's gapped (non-prelim): 1094
length of query: 226
length of database: 8,064,228,071
effective HSP length: 137
effective length of query: 89
effective length of database: 9,144,741,214
effective search space: 813881968046
effective search space used: 813881968046
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 74 (33.1 bits)