Your job contains 1 sequence.
>psy6089
MNGNSLQGAGGIGRAVAEWMTHGEATQELLSFDVQRFLDLHNNRQYLQQRIREVVGSTYR
VGDPRPEMPPGTFFKPKFFDFMEEEYRACFEGVGIIDMSSFSKIKITCSDESLVDWLQQL
CSNDVNIPVGGISHTGMQNERGGYENDCILVRETETSYFMVSPTSQQTRVFEWMKNHLPT
KHYITLSDVTSKYTVINVVGPKAKQLLSELCDEDINLHPFSYKRTDIGYASDVKLMGFTH
TGEPGYCLYIPSEYALHVYQKIMTLGKDYNARDVGMFTQRYMRIEKFIPFWAEDLNSVTT
PFESGSAYRVKLD
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy6089
(313 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|F1P7E6 - symbol:PDPR "Uncharacterized protein" ... 655 1.2e-75 2
UNIPROTKB|F1S433 - symbol:LOC100525224 "Uncharacterized p... 650 3.2e-75 2
UNIPROTKB|A8MT40 - symbol:PDPR "Pyruvate dehydrogenase ph... 652 4.1e-75 2
UNIPROTKB|Q8NCN5 - symbol:PDPR "Pyruvate dehydrogenase ph... 652 4.1e-75 2
UNIPROTKB|F1N4M3 - symbol:PDPR "Pyruvate dehydrogenase ph... 657 5.2e-75 2
UNIPROTKB|O46504 - symbol:PDPR "Pyruvate dehydrogenase ph... 653 1.4e-74 2
MGI|MGI:2442188 - symbol:Pdpr "pyruvate dehydrogenase pho... 646 3.7e-74 2
RGD|1308307 - symbol:Pdpr "pyruvate dehydrogenase phospha... 645 4.7e-74 2
UNIPROTKB|F1NG59 - symbol:PDPR "Uncharacterized protein" ... 653 2.5e-73 2
FB|FBgn0029706 - symbol:CG3626 species:7227 "Drosophila m... 623 8.6e-72 2
WB|WBGene00013718 - symbol:Y106G6H.5 species:6239 "Caenor... 513 5.2e-59 2
ZFIN|ZDB-GENE-040426-1220 - symbol:ypel5 "yippee-like 5" ... 556 8.9e-54 1
TIGR_CMR|SPO_2436 - symbol:SPO_2436 "FAD dependent oxidor... 327 3.6e-35 2
TIGR_CMR|SPO_3396 - symbol:SPO_3396 "FAD dependent oxidor... 296 8.3e-34 2
TIGR_CMR|SPO_A0311 - symbol:SPO_A0311 "FAD dependent oxid... 275 3.3e-32 2
ZFIN|ZDB-GENE-040426-996 - symbol:sardh "sarcosine dehydr... 263 9.1e-30 2
MGI|MGI:1921379 - symbol:Dmgdh "dimethylglycine dehydroge... 268 9.2e-30 2
RGD|620453 - symbol:Dmgdh "dimethylglycine dehydrogenase"... 262 3.9e-29 2
UNIPROTKB|Q63342 - symbol:Dmgdh "Dimethylglycine dehydrog... 262 3.9e-29 2
UNIPROTKB|B4E1J9 - symbol:DMGDH "cDNA FLJ50354, highly si... 244 6.3e-29 2
UNIPROTKB|F1RF50 - symbol:DMGDH "Uncharacterized protein"... 252 4.7e-28 2
UNIPROTKB|F1PK75 - symbol:DMGDH "Uncharacterized protein"... 250 5.8e-28 2
UNIPROTKB|F1PKA8 - symbol:DMGDH "Uncharacterized protein"... 250 6.9e-28 2
UNIPROTKB|F8W6P8 - symbol:DMGDH "Dimethylglycine dehydrog... 244 7.0e-28 2
UNIPROTKB|Q8TCC6 - symbol:DMGDH "Dimethylglycine dehydrog... 244 9.5e-28 2
UNIPROTKB|H3BUH3 - symbol:PDPR "Pyruvate dehydrogenase ph... 307 2.2e-27 1
UNIPROTKB|Q9UI17 - symbol:DMGDH "Dimethylglycine dehydrog... 244 3.4e-27 2
ZFIN|ZDB-GENE-080227-8 - symbol:dmgdh "dimethylglycine de... 261 5.2e-27 2
UNIPROTKB|E1BSV1 - symbol:DMGDH "Uncharacterized protein"... 257 5.6e-26 2
UNIPROTKB|F1MDJ6 - symbol:DMGDH "Uncharacterized protein"... 243 6.1e-26 2
TIGR_CMR|BA_4449 - symbol:BA_4449 "glycine cleavage syste... 281 1.2e-24 1
UNIPROTKB|B7ZAR9 - symbol:PDPR "cDNA, FLJ79283, highly si... 280 1.6e-24 1
UNIPROTKB|H3BV59 - symbol:PDPR "Pyruvate dehydrogenase ph... 280 1.6e-24 1
UNIPROTKB|B3KSE1 - symbol:PDPR "Pyruvate dehydrogenase ph... 276 4.2e-24 1
UNIPROTKB|H3BU60 - symbol:PDPR "Pyruvate dehydrogenase ph... 274 6.8e-24 1
TIGR_CMR|SPO_0544 - symbol:SPO_0544 "aminomethyl transfer... 227 8.8e-24 2
UNIPROTKB|E2R5G7 - symbol:SARDH "Uncharacterized protein"... 216 3.7e-21 2
UNIPROTKB|E1BB28 - symbol:SARDH "Uncharacterized protein"... 215 4.1e-21 2
UNIPROTKB|B4DPI2 - symbol:SARDH "Sarcosine dehydrogenase,... 212 2.2e-20 2
UNIPROTKB|Q9UL12 - symbol:SARDH "Sarcosine dehydrogenase,... 212 4.0e-20 2
TIGR_CMR|SPO_1592 - symbol:SPO_1592 "aminomethyl transfer... 223 6.2e-20 2
RGD|621125 - symbol:Sardh "sarcosine dehydrogenase" speci... 205 8.0e-20 2
UNIPROTKB|Q64380 - symbol:Sardh "Sarcosine dehydrogenase,... 205 8.0e-20 2
UNIPROTKB|F1NBJ7 - symbol:SARDH "Uncharacterized protein"... 200 1.1e-19 2
MGI|MGI:2183102 - symbol:Sardh "sarcosine dehydrogenase" ... 202 1.6e-19 2
UNIPROTKB|F1S0R9 - symbol:SARDH "Uncharacterized protein"... 206 2.3e-19 2
TIGR_CMR|SPO_0564 - symbol:SPO_0564 "aminomethyl transfer... 171 2.3e-18 2
WB|WBGene00021355 - symbol:Y37E3.17 species:6239 "Caenorh... 191 6.2e-17 2
TIGR_CMR|SPO_1628 - symbol:SPO_1628 "aminomethyl transfer... 189 1.2e-16 2
TIGR_CMR|SPO_A0310 - symbol:SPO_A0310 "aminomethyl transf... 189 2.0e-16 2
TIGR_CMR|SPO_A0063 - symbol:SPO_A0063 "FAD dependent oxid... 204 2.6e-16 2
UNIPROTKB|D4A8Z7 - symbol:Sardh "Sarcosine dehydrogenase,... 143 8.5e-16 3
TIGR_CMR|SPO_0207 - symbol:SPO_0207 "aminomethyl transfer... 181 3.2e-15 2
UNIPROTKB|Q48CP0 - symbol:soxA "Sarcosine oxidase, alpha ... 210 8.2e-15 2
TIGR_CMR|SPO_3400 - symbol:SPO_3400 "aminomethyl transfer... 165 2.1e-14 2
TIGR_CMR|SPO_0635 - symbol:SPO_0635 "aminomethyl transfer... 188 2.8e-14 2
UNIPROTKB|D4A9I9 - symbol:Sardh "Sarcosine dehydrogenase,... 207 5.3e-14 1
UNIPROTKB|Q4K4P9 - symbol:soxA "Sarcosine oxidase, alpha ... 204 1.2e-13 2
TIGR_CMR|CPS_2480 - symbol:CPS_2480 "sarcosine oxidase, a... 203 1.8e-13 1
TIGR_CMR|CPS_4034 - symbol:CPS_4034 "sarcosine oxidase, a... 203 1.8e-13 1
TIGR_CMR|CHY_0489 - symbol:CHY_0489 "glycine cleavage sys... 194 3.0e-13 1
FB|FBgn0034276 - symbol:CG6385 species:7227 "Drosophila m... 176 1.1e-12 2
TIGR_CMR|GSU_0375 - symbol:GSU_0375 "glycine cleavage sys... 184 5.0e-12 1
CGD|CAL0006098 - symbol:GCV1 species:5476 "Candida albica... 179 2.5e-11 1
UNIPROTKB|Q5AC31 - symbol:GCV1 "Aminomethyltransferase" s... 179 2.5e-11 1
TIGR_CMR|SPO_1562 - symbol:SPO_1562 "glycine cleavage sys... 178 3.0e-11 1
UNIPROTKB|Q5SYV2 - symbol:SARDH "Sarcosine dehydrogenase,... 177 3.6e-11 1
ASPGD|ASPL0000076695 - symbol:AN8654 species:162425 "Emer... 156 1.1e-10 2
TIGR_CMR|CPS_1274 - symbol:CPS_1274 "glycine cleavage sys... 170 2.3e-10 1
TIGR_CMR|SPO_2345 - symbol:SPO_2345 "sarcosine oxidase, a... 166 3.9e-09 1
TIGR_CMR|CBU_1716 - symbol:CBU_1716 "glycine cleavage sys... 154 1.7e-08 1
TIGR_CMR|SPO_1746 - symbol:SPO_1746 "sarcosine oxidase, a... 156 5.0e-08 1
TIGR_CMR|CPS_3841 - symbol:CPS_3841 "glycine cleavage sys... 147 1.2e-07 1
UNIPROTKB|P49364 - symbol:GDCST "Aminomethyltransferase, ... 145 2.3e-07 1
UNIPROTKB|P27248 - symbol:gcvT species:83333 "Escherichia... 142 4.1e-07 1
TAIR|locus:2008900 - symbol:AT1G11860 species:3702 "Arabi... 139 1.1e-06 1
TIGR_CMR|SO_0779 - symbol:SO_0779 "glycine cleavage syste... 138 1.2e-06 1
TIGR_CMR|SPO_1579 - symbol:SPO_1579 "aminomethyl transfer... 138 1.3e-06 1
GENEDB_PFALCIPARUM|PF13_0345 - symbol:PF13_0345 "aminomet... 138 1.4e-06 1
UNIPROTKB|Q8I6T0 - symbol:PF13_0345 "Aminomethyltransfera... 138 1.4e-06 1
TIGR_CMR|SPO_1586 - symbol:SPO_1586 "sarcosine oxidase, a... 141 2.4e-06 1
TIGR_CMR|SPO_A0057 - symbol:SPO_A0057 "glycine cleavage s... 135 2.6e-06 1
DICTYBASE|DDB_G0292326 - symbol:gcvT "aminomethyltransfer... 134 4.0e-06 1
FB|FBgn0032287 - symbol:CG6415 species:7227 "Drosophila m... 133 5.4e-06 1
SGD|S000002426 - symbol:GCV1 "T subunit of the mitochondr... 126 3.2e-05 1
POMBASE|SPAC31G5.14 - symbol:gcv1 "glycine decarboxylase ... 124 5.0e-05 1
WB|WBGene00017765 - symbol:gcst-1 species:6239 "Caenorhab... 124 5.4e-05 1
UNIPROTKB|H3BQG3 - symbol:PDPR "Pyruvate dehydrogenase ph... 124 7.4e-05 1
UNIPROTKB|P64220 - symbol:gcvT "Aminomethyltransferase" s... 116 0.00037 1
UNIPROTKB|Q5SYV1 - symbol:SARDH "Sarcosine dehydrogenase,... 91 0.00046 2
>UNIPROTKB|F1P7E6 [details] [associations]
symbol:PDPR "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0006546 "glycine catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0004047
"aminomethyltransferase activity" evidence=IEA] InterPro:IPR006076
InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571 GO:GO:0005737
GO:GO:0016491 GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977
Pfam:PF08669 GeneTree:ENSGT00530000063120 OMA:DWFDIVG
EMBL:AAEX03004073 Ensembl:ENSCAFT00000032024 Uniprot:F1P7E6
Length = 850
Score = 655 (235.6 bits), Expect = 1.2e-75, Sum P(2) = 1.2e-75
Identities = 120/245 (48%), Positives = 167/245 (68%)
Query: 72 TFFKPKFFDFMEEEYRACFEGVGIIDMSSFSKIKITCSDESLVDWLQQLCSNDVNIPVGG 131
TF+KP +FD +E E + C E V +IDMSSF+K +IT + + ++ LQ L SND+++PVG
Sbjct: 448 TFYKPDWFDIVESEVKCCKEAVCVIDMSSFTKFEITSTGDQALEVLQYLFSNDLDVPVGH 507
Query: 132 ISHTGMQNERGGYENDCILVRETETSYFMVSPTSQQTRVFEWMKNHLPTKHYITLSDVTS 191
I HTGM NE GGYENDC + R ++ S+FM+SPT QQ + W+K H+P + L DVT
Sbjct: 508 IVHTGMLNEGGGYENDCSIARLSKRSFFMISPTDQQVHCWAWLKKHMPEDSNLLLEDVTW 567
Query: 192 KYTVINVVGPKAKQLLSELCDEDINLHPFSY---KRTDIGYASDVKLMGFTHTGEPGYCL 248
KYT +N++GP+A +LSEL + F K +GYA+ +++M THTGEPG+ L
Sbjct: 568 KYTALNLIGPRAVDVLSELSYAPMTPDHFPSLFCKEMSVGYANGIRVMSMTHTGEPGFML 627
Query: 249 YIPSEYALHVYQKIMTLGKDYNARDVGMFTQRYMRIEKFIPFWAEDLNSVTTPFESGSAY 308
YIP EYALHVY ++M++G+ Y R+ G + R +RIEKF FW +DLN++TTP E G
Sbjct: 628 YIPIEYALHVYNEVMSVGQKYGIRNAGYYALRSLRIEKFFAFWGQDLNTLTTPLECGRES 687
Query: 309 RVKLD 313
RVKL+
Sbjct: 688 RVKLE 692
Score = 126 (49.4 bits), Expect = 1.2e-75, Sum P(2) = 1.2e-75
Identities = 25/71 (35%), Positives = 40/71 (56%)
Query: 1 MNGNSLQGAGGIGRAVAEWMTHGEATQELLSFDVQRFLDLHNNRQYLQQRIREVVGSTYR 60
MN + GG GR +AEWM HG ++ + D++RF L ++R +L+ R+ EV+ Y
Sbjct: 332 MNSAGISFGGGAGRYLAEWMVHGYPSENIWELDLKRFGALQSSRTFLRHRVMEVMPLLYD 391
Query: 61 VGDPRPEMPPG 71
+ PR + G
Sbjct: 392 LKVPRWDFQTG 402
>UNIPROTKB|F1S433 [details] [associations]
symbol:LOC100525224 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0006546 "glycine catabolic process" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0004047 "aminomethyltransferase
activity" evidence=IEA] InterPro:IPR006076 InterPro:IPR006222
Pfam:PF01266 Pfam:PF01571 GO:GO:0005737 GO:GO:0016491 GO:GO:0004047
GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669
GeneTree:ENSGT00530000063120 EMBL:CU929739
Ensembl:ENSSSCT00000003015 OMA:PSLFTHK Uniprot:F1S433
Length = 537
Score = 650 (233.9 bits), Expect = 3.2e-75, Sum P(2) = 3.2e-75
Identities = 119/245 (48%), Positives = 167/245 (68%)
Query: 72 TFFKPKFFDFMEEEYRACFEGVGIIDMSSFSKIKITCSDESLVDWLQQLCSNDVNIPVGG 131
TF+KP +F+ +E E + C E V +IDMSSF+K +IT + + ++ LQ L SND+++PVG
Sbjct: 158 TFYKPDWFEIVESEVKCCKEAVCVIDMSSFTKFEITSTGDQALEILQYLFSNDLDVPVGH 217
Query: 132 ISHTGMQNERGGYENDCILVRETETSYFMVSPTSQQTRVFEWMKNHLPTKHYITLSDVTS 191
I HTGM NE GGYENDC + R ++ S+FM+SPT QQ + W+K ++P + L DVT
Sbjct: 218 IVHTGMLNESGGYENDCSIARLSKRSFFMISPTDQQVHCWAWLKKYMPEDSNLILEDVTW 277
Query: 192 KYTVINVVGPKAKQLLSELCDEDINLHPFSY---KRTDIGYASDVKLMGFTHTGEPGYCL 248
KYT +N++GP+A +LSEL + F K +GYA+ +++M THTGEPG+ L
Sbjct: 278 KYTALNLIGPRAVDVLSELSYAPMTPDHFPSLFCKEMSVGYANGIRVMSMTHTGEPGFML 337
Query: 249 YIPSEYALHVYQKIMTLGKDYNARDVGMFTQRYMRIEKFIPFWAEDLNSVTTPFESGSAY 308
YIP EYALHVY ++M++G+ Y R+ G + R +RIEKF FW +DLN++TTP E G
Sbjct: 338 YIPIEYALHVYNEVMSVGQKYGIRNAGYYALRSLRIEKFFAFWGQDLNTLTTPLECGRES 397
Query: 309 RVKLD 313
RVKLD
Sbjct: 398 RVKLD 402
Score = 127 (49.8 bits), Expect = 3.2e-75, Sum P(2) = 3.2e-75
Identities = 26/71 (36%), Positives = 40/71 (56%)
Query: 1 MNGNSLQGAGGIGRAVAEWMTHGEATQELLSFDVQRFLDLHNNRQYLQQRIREVVGSTYR 60
MN L GG GR +AEWM HG ++ + D++RF L ++R +L+ R+ EV+ Y
Sbjct: 42 MNSAGLSFGGGAGRYLAEWMVHGYPSESVWELDLKRFGALQSSRTFLRHRVMEVMPLLYD 101
Query: 61 VGDPRPEMPPG 71
+ PR + G
Sbjct: 102 LKVPRWDFQTG 112
>UNIPROTKB|A8MT40 [details] [associations]
symbol:PDPR "Pyruvate dehydrogenase phosphatase regulatory
subunit, mitochondrial" species:9606 "Homo sapiens" [GO:0004047
"aminomethyltransferase activity" evidence=IEA] [GO:0006546
"glycine catabolic process" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR006076 InterPro:IPR006222 Pfam:PF01266
Pfam:PF01571 GO:GO:0005739 GO:GO:0016491 GO:GO:0004047
GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669 eggNOG:COG0665
EMBL:AC009060 EMBL:AC009022 HGNC:HGNC:30264 IPI:IPI00872462
ProteinModelPortal:A8MT40 SMR:A8MT40 STRING:A8MT40 PaxDb:A8MT40
Ensembl:ENST00000398122 HOGENOM:HOG000199501 HOVERGEN:HBG090076
ArrayExpress:A8MT40 Bgee:A8MT40 Uniprot:A8MT40
Length = 779
Score = 652 (234.6 bits), Expect = 4.1e-75, Sum P(2) = 4.1e-75
Identities = 119/245 (48%), Positives = 166/245 (67%)
Query: 72 TFFKPKFFDFMEEEYRACFEGVGIIDMSSFSKIKITCSDESLVDWLQQLCSNDVNIPVGG 131
TF+KP +FD +E E + C E V +IDMSSF+K +IT + + ++ LQ L SND+++PVG
Sbjct: 400 TFYKPDWFDIVESEVKCCKEAVCVIDMSSFTKFEITSTGDQALEVLQYLFSNDLDVPVGH 459
Query: 132 ISHTGMQNERGGYENDCILVRETETSYFMVSPTSQQTRVFEWMKNHLPTKHYITLSDVTS 191
I HTGM NE GGYENDC + R + S+FM+SPT QQ + W+K H+P + L DVT
Sbjct: 460 IVHTGMLNEGGGYENDCSIARLNKRSFFMISPTDQQVHCWAWLKKHMPKDSNLLLEDVTW 519
Query: 192 KYTVINVVGPKAKQLLSELCDEDINLHPFSY---KRTDIGYASDVKLMGFTHTGEPGYCL 248
KYT +N++GP+A +LSEL + F K +GYA+ +++M THTGEPG+ L
Sbjct: 520 KYTALNLIGPRAVDVLSELSYAPMTPDHFPSLFCKEMSVGYANGIRVMSMTHTGEPGFML 579
Query: 249 YIPSEYALHVYQKIMTLGKDYNARDVGMFTQRYMRIEKFIPFWAEDLNSVTTPFESGSAY 308
YIP EYALHVY ++M++G+ Y R+ G + R +RIEKF FW +D+N++TTP E G
Sbjct: 580 YIPIEYALHVYNEVMSVGQKYGIRNAGYYALRSLRIEKFFAFWGQDINNLTTPLECGRES 639
Query: 309 RVKLD 313
RVKL+
Sbjct: 640 RVKLE 644
Score = 124 (48.7 bits), Expect = 4.1e-75, Sum P(2) = 4.1e-75
Identities = 25/71 (35%), Positives = 40/71 (56%)
Query: 1 MNGNSLQGAGGIGRAVAEWMTHGEATQELLSFDVQRFLDLHNNRQYLQQRIREVVGSTYR 60
MN L GG G+ +AEWM HG ++ + D++RF L ++R +L+ R+ EV+ Y
Sbjct: 284 MNSAGLSFGGGAGKYLAEWMVHGYPSENVWELDLKRFGALQSSRTFLRHRVMEVMPLMYD 343
Query: 61 VGDPRPEMPPG 71
+ PR + G
Sbjct: 344 LKVPRWDFQTG 354
>UNIPROTKB|Q8NCN5 [details] [associations]
symbol:PDPR "Pyruvate dehydrogenase phosphatase regulatory
subunit, mitochondrial" species:9606 "Homo sapiens" [GO:0004047
"aminomethyltransferase activity" evidence=IEA] [GO:0006546
"glycine catabolic process" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0005759 "mitochondrial
matrix" evidence=TAS] [GO:0006090 "pyruvate metabolic process"
evidence=TAS] [GO:0010510 "regulation of acetyl-CoA biosynthetic
process from pyruvate" evidence=TAS] [GO:0044281 "small molecule
metabolic process" evidence=TAS] Reactome:REACT_111217
InterPro:IPR006076 InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571
GO:GO:0005759 GO:GO:0016491 GO:GO:0006090 GO:GO:0004047
GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669 eggNOG:COG0665
GO:GO:0010510 EMBL:AC009060 HOGENOM:HOG000251716 CTD:55066
HOVERGEN:HBG103854 OrthoDB:EOG4NZTSJ EMBL:AB082521 EMBL:AK292502
EMBL:BX538153 EMBL:CR627404 EMBL:AC009022 EMBL:BC150251
IPI:IPI00168407 RefSeq:NP_060460.4 UniGene:Hs.461183
ProteinModelPortal:Q8NCN5 SMR:Q8NCN5 STRING:Q8NCN5
PhosphoSite:Q8NCN5 DMDM:182668644 PaxDb:Q8NCN5 PRIDE:Q8NCN5
Ensembl:ENST00000288050 Ensembl:ENST00000568530 GeneID:55066
KEGG:hsa:55066 UCSC:uc002eyf.1 GeneCards:GC16P070148
HGNC:HGNC:30264 neXtProt:NX_Q8NCN5 InParanoid:Q8NCN5 OMA:DWFDIVG
GenomeRNAi:55066 NextBio:58575 ArrayExpress:Q8NCN5 Bgee:Q8NCN5
Genevestigator:Q8NCN5 Uniprot:Q8NCN5
Length = 879
Score = 652 (234.6 bits), Expect = 4.1e-75, Sum P(2) = 4.1e-75
Identities = 119/245 (48%), Positives = 166/245 (67%)
Query: 72 TFFKPKFFDFMEEEYRACFEGVGIIDMSSFSKIKITCSDESLVDWLQQLCSNDVNIPVGG 131
TF+KP +FD +E E + C E V +IDMSSF+K +IT + + ++ LQ L SND+++PVG
Sbjct: 500 TFYKPDWFDIVESEVKCCKEAVCVIDMSSFTKFEITSTGDQALEVLQYLFSNDLDVPVGH 559
Query: 132 ISHTGMQNERGGYENDCILVRETETSYFMVSPTSQQTRVFEWMKNHLPTKHYITLSDVTS 191
I HTGM NE GGYENDC + R + S+FM+SPT QQ + W+K H+P + L DVT
Sbjct: 560 IVHTGMLNEGGGYENDCSIARLNKRSFFMISPTDQQVHCWAWLKKHMPKDSNLLLEDVTW 619
Query: 192 KYTVINVVGPKAKQLLSELCDEDINLHPFSY---KRTDIGYASDVKLMGFTHTGEPGYCL 248
KYT +N++GP+A +LSEL + F K +GYA+ +++M THTGEPG+ L
Sbjct: 620 KYTALNLIGPRAVDVLSELSYAPMTPDHFPSLFCKEMSVGYANGIRVMSMTHTGEPGFML 679
Query: 249 YIPSEYALHVYQKIMTLGKDYNARDVGMFTQRYMRIEKFIPFWAEDLNSVTTPFESGSAY 308
YIP EYALHVY ++M++G+ Y R+ G + R +RIEKF FW +D+N++TTP E G
Sbjct: 680 YIPIEYALHVYNEVMSVGQKYGIRNAGYYALRSLRIEKFFAFWGQDINNLTTPLECGRES 739
Query: 309 RVKLD 313
RVKL+
Sbjct: 740 RVKLE 744
Score = 124 (48.7 bits), Expect = 4.1e-75, Sum P(2) = 4.1e-75
Identities = 25/71 (35%), Positives = 40/71 (56%)
Query: 1 MNGNSLQGAGGIGRAVAEWMTHGEATQELLSFDVQRFLDLHNNRQYLQQRIREVVGSTYR 60
MN L GG G+ +AEWM HG ++ + D++RF L ++R +L+ R+ EV+ Y
Sbjct: 384 MNSAGLSFGGGAGKYLAEWMVHGYPSENVWELDLKRFGALQSSRTFLRHRVMEVMPLMYD 443
Query: 61 VGDPRPEMPPG 71
+ PR + G
Sbjct: 444 LKVPRWDFQTG 454
>UNIPROTKB|F1N4M3 [details] [associations]
symbol:PDPR "Pyruvate dehydrogenase phosphatase regulatory
subunit, mitochondrial" species:9913 "Bos taurus" [GO:0005739
"mitochondrion" evidence=IEA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0006546 "glycine catabolic process" evidence=IEA]
[GO:0004047 "aminomethyltransferase activity" evidence=IEA]
InterPro:IPR006076 InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571
GO:GO:0005739 GO:GO:0016491 GO:GO:0004047 GO:GO:0006546
InterPro:IPR013977 Pfam:PF08669 GeneTree:ENSGT00530000063120
IPI:IPI00708172 UniGene:Bt.65397 OMA:DWFDIVG EMBL:DAAA02045979
EMBL:DAAA02045976 EMBL:DAAA02045977 EMBL:DAAA02045978
Ensembl:ENSBTAT00000021895 Uniprot:F1N4M3
Length = 878
Score = 657 (236.3 bits), Expect = 5.2e-75, Sum P(2) = 5.2e-75
Identities = 120/245 (48%), Positives = 168/245 (68%)
Query: 72 TFFKPKFFDFMEEEYRACFEGVGIIDMSSFSKIKITCSDESLVDWLQQLCSNDVNIPVGG 131
TF+KP +F+ +E E + C E V +IDMSSF+K +IT + + ++ LQ L SND+++PVG
Sbjct: 499 TFYKPDWFEIVESEVKCCKEAVCVIDMSSFTKFEITSTGDQALEILQYLFSNDLDVPVGH 558
Query: 132 ISHTGMQNERGGYENDCILVRETETSYFMVSPTSQQTRVFEWMKNHLPTKHYITLSDVTS 191
I HTGM NERGGYENDC + R ++ S+FM+SPT QQ + W+K ++P + L DVT
Sbjct: 559 IVHTGMLNERGGYENDCSIARLSKRSFFMISPTDQQVHCWAWLKKYMPEDSNLILEDVTW 618
Query: 192 KYTVINVVGPKAKQLLSELCDEDINLHPFSY---KRTDIGYASDVKLMGFTHTGEPGYCL 248
KYT +N++GP+A +LSEL + F K +GYA+ +++M THTGEPG+ L
Sbjct: 619 KYTALNLIGPRAVDVLSELSYAPMTPDHFPSLFCKEMSVGYANGIRVMSMTHTGEPGFML 678
Query: 249 YIPSEYALHVYQKIMTLGKDYNARDVGMFTQRYMRIEKFIPFWAEDLNSVTTPFESGSAY 308
YIP EYALHVY ++M++G+ Y R+ G + R +RIEKF FW +DLN++TTP E G
Sbjct: 679 YIPIEYALHVYNEVMSVGQKYGIRNAGYYALRSLRIEKFFAFWGQDLNTLTTPLECGGES 738
Query: 309 RVKLD 313
RVKLD
Sbjct: 739 RVKLD 743
Score = 118 (46.6 bits), Expect = 5.2e-75, Sum P(2) = 5.2e-75
Identities = 24/71 (33%), Positives = 40/71 (56%)
Query: 1 MNGNSLQGAGGIGRAVAEWMTHGEATQELLSFDVQRFLDLHNNRQYLQQRIREVVGSTYR 60
MN L GG G+ +AEWM +G ++ + D++RF L ++R +L+ R+ EV+ Y
Sbjct: 383 MNSAGLSFGGGAGKYLAEWMVYGYPSENVWELDLKRFGALQSSRTFLRHRVMEVMPLLYD 442
Query: 61 VGDPRPEMPPG 71
+ PR + G
Sbjct: 443 LKVPRWDFQTG 453
>UNIPROTKB|O46504 [details] [associations]
symbol:PDPR "Pyruvate dehydrogenase phosphatase regulatory
subunit, mitochondrial" species:9913 "Bos taurus" [GO:0005759
"mitochondrial matrix" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0006546 "glycine catabolic process"
evidence=IEA] [GO:0004047 "aminomethyltransferase activity"
evidence=IEA] InterPro:IPR006076 InterPro:IPR006222 Pfam:PF01266
Pfam:PF01571 EMBL:AF026954 GO:GO:0005759 GO:GO:0016491
GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669
eggNOG:COG0665 HOGENOM:HOG000251716 IPI:IPI00708172
RefSeq:NP_777206.1 UniGene:Bt.65397 ProteinModelPortal:O46504
STRING:O46504 PRIDE:O46504 GeneID:286844 KEGG:bta:286844 CTD:55066
HOVERGEN:HBG103854 InParanoid:O46504 OrthoDB:EOG4NZTSJ
NextBio:20806495 Uniprot:O46504
Length = 878
Score = 653 (234.9 bits), Expect = 1.4e-74, Sum P(2) = 1.4e-74
Identities = 119/245 (48%), Positives = 167/245 (68%)
Query: 72 TFFKPKFFDFMEEEYRACFEGVGIIDMSSFSKIKITCSDESLVDWLQQLCSNDVNIPVGG 131
TF+KP +F+ +E E + C E V +IDMSSF+K +IT + + ++ LQ L SND+++PVG
Sbjct: 499 TFYKPDWFEIVESEVKCCKEAVCVIDMSSFTKFEITSTGDQALEILQYLFSNDLDVPVGH 558
Query: 132 ISHTGMQNERGGYENDCILVRETETSYFMVSPTSQQTRVFEWMKNHLPTKHYITLSDVTS 191
I HTGM NERGGYENDC + R ++ S+FM+SPT QQ + W+K ++P + L DVT
Sbjct: 559 IVHTGMLNERGGYENDCSIARLSKRSFFMISPTDQQVHCWAWLKKYMPEDSNLILEDVTW 618
Query: 192 KYTVINVVGPKAKQLLSELCDEDINLHPFSY---KRTDIGYASDVKLMGFTHTGEPGYCL 248
KYT +N++GP+ +LSEL + F K +GYA+ +++M THTGEPG+ L
Sbjct: 619 KYTALNLIGPRTVDVLSELSYAPMTPDHFPSLFCKEMSVGYANGIRVMSMTHTGEPGFML 678
Query: 249 YIPSEYALHVYQKIMTLGKDYNARDVGMFTQRYMRIEKFIPFWAEDLNSVTTPFESGSAY 308
YIP EYALHVY ++M++G+ Y R+ G + R +RIEKF FW +DLN++TTP E G
Sbjct: 679 YIPIEYALHVYNEVMSVGQKYGIRNAGYYALRSLRIEKFFAFWGQDLNTLTTPLECGGES 738
Query: 309 RVKLD 313
RVKLD
Sbjct: 739 RVKLD 743
Score = 118 (46.6 bits), Expect = 1.4e-74, Sum P(2) = 1.4e-74
Identities = 24/71 (33%), Positives = 40/71 (56%)
Query: 1 MNGNSLQGAGGIGRAVAEWMTHGEATQELLSFDVQRFLDLHNNRQYLQQRIREVVGSTYR 60
MN L GG G+ +AEWM +G ++ + D++RF L ++R +L+ R+ EV+ Y
Sbjct: 383 MNSAGLSFGGGAGKYLAEWMVYGYPSENVWELDLKRFGALQSSRTFLRHRVMEVMPLLYD 442
Query: 61 VGDPRPEMPPG 71
+ PR + G
Sbjct: 443 LKVPRWDFQTG 453
>MGI|MGI:2442188 [details] [associations]
symbol:Pdpr "pyruvate dehydrogenase phosphatase regulatory
subunit" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0004047
"aminomethyltransferase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0006546 "glycine catabolic process" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] InterPro:IPR006076
InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571 MGI:MGI:2442188
GO:GO:0005739 GO:GO:0005759 GO:GO:0016491 GO:GO:0004047
GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669 eggNOG:COG0665
HOGENOM:HOG000251716 GeneTree:ENSGT00530000063120 CTD:55066
HOVERGEN:HBG103854 OrthoDB:EOG4NZTSJ OMA:DWFDIVG EMBL:AY223867
EMBL:AK129472 EMBL:BC120745 EMBL:BC125425 IPI:IPI00453792
RefSeq:NP_938050.1 UniGene:Mm.28350 UniGene:Mm.370024
ProteinModelPortal:Q7TSQ8 SMR:Q7TSQ8 PhosphoSite:Q7TSQ8
PaxDb:Q7TSQ8 PRIDE:Q7TSQ8 Ensembl:ENSMUST00000039333 GeneID:319518
KEGG:mmu:319518 UCSC:uc009nlw.1 InParanoid:Q7TSQ8 NextBio:394896
Bgee:Q7TSQ8 Genevestigator:Q7TSQ8 Uniprot:Q7TSQ8
Length = 878
Score = 646 (232.5 bits), Expect = 3.7e-74, Sum P(2) = 3.7e-74
Identities = 119/245 (48%), Positives = 165/245 (67%)
Query: 72 TFFKPKFFDFMEEEYRACFEGVGIIDMSSFSKIKITCSDESLVDWLQQLCSNDVNIPVGG 131
TF+KP +FD +E E + C E V +IDMSSF+K +IT + + ++ LQ L ND+++PVG
Sbjct: 499 TFYKPDWFDIVESEVKCCKEAVCVIDMSSFTKFEITSTGDEALESLQYLFCNDLDVPVGH 558
Query: 132 ISHTGMQNERGGYENDCILVRETETSYFMVSPTSQQTRVFEWMKNHLPTKHYITLSDVTS 191
I HTGM NE GGYENDC + R T+ S+FM+SPT QQ + W+ +LP + L DVT
Sbjct: 559 IVHTGMLNEYGGYENDCSIARLTKRSFFMISPTDQQVHCWAWLNKYLPKDSNLLLEDVTW 618
Query: 192 KYTVINVVGPKAKQLLSELCDEDINLHPFSY---KRTDIGYASDVKLMGFTHTGEPGYCL 248
KYT +N++GP+A +LSEL + F K +GYA+ +++M THTGEPG+ L
Sbjct: 619 KYTALNLIGPRAVDVLSELSYAPMTPDHFPTLFCKEMSVGYANGIRVMSMTHTGEPGFML 678
Query: 249 YIPSEYALHVYQKIMTLGKDYNARDVGMFTQRYMRIEKFIPFWAEDLNSVTTPFESGSAY 308
YIP EYALHVY ++M++G+ Y R+ G + R +RIEKF FW +DLN++TTP E G
Sbjct: 679 YIPIEYALHVYNEVMSVGQKYGIRNAGYYALRSLRIEKFFAFWGQDLNTLTTPLECGGES 738
Query: 309 RVKLD 313
RVKL+
Sbjct: 739 RVKLE 743
Score = 121 (47.7 bits), Expect = 3.7e-74, Sum P(2) = 3.7e-74
Identities = 25/71 (35%), Positives = 40/71 (56%)
Query: 1 MNGNSLQGAGGIGRAVAEWMTHGEATQELLSFDVQRFLDLHNNRQYLQQRIREVVGSTYR 60
MN L GG G+ +AEWM +G ++ + D+QRF L ++R +L+ R+ EV+ Y
Sbjct: 383 MNSAGLSLGGGAGKFLAEWMVYGYPSENVWELDLQRFGALQSSRTFLRHRVMEVMPLIYD 442
Query: 61 VGDPRPEMPPG 71
+ PR + G
Sbjct: 443 LKVPRWDFQTG 453
>RGD|1308307 [details] [associations]
symbol:Pdpr "pyruvate dehydrogenase phosphatase regulatory
subunit" species:10116 "Rattus norvegicus" [GO:0004047
"aminomethyltransferase activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA;ISO] [GO:0006546 "glycine catabolic
process" evidence=IEA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] InterPro:IPR006076 InterPro:IPR006222 Pfam:PF01266
Pfam:PF01571 RGD:1308307 GO:GO:0005739 GO:GO:0016491 EMBL:CH473972
GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669
GeneTree:ENSGT00530000063120 CTD:55066 OrthoDB:EOG4NZTSJ
OMA:DWFDIVG IPI:IPI00359656 RefSeq:NP_001100900.1 UniGene:Rn.21088
Ensembl:ENSRNOT00000038452 GeneID:307852 KEGG:rno:307852
UCSC:RGD:1308307 NextBio:657991 Uniprot:D3ZXA6
Length = 878
Score = 645 (232.1 bits), Expect = 4.7e-74, Sum P(2) = 4.7e-74
Identities = 119/245 (48%), Positives = 166/245 (67%)
Query: 72 TFFKPKFFDFMEEEYRACFEGVGIIDMSSFSKIKITCSDESLVDWLQQLCSNDVNIPVGG 131
TF+KP +FD +E E + C E V +IDMSSF+K +IT + + ++ LQ L SND+++PVG
Sbjct: 499 TFYKPDWFDIVESEVKCCKEAVCVIDMSSFTKFEITSTGDQALESLQYLFSNDLDVPVGH 558
Query: 132 ISHTGMQNERGGYENDCILVRETETSYFMVSPTSQQTRVFEWMKNHLPTKHYITLSDVTS 191
I HTGM NE GG+ENDC + R T+ S+FM+SPT QQ + W+ +LP + L DVT
Sbjct: 559 IVHTGMLNEYGGHENDCSIARLTKRSFFMISPTDQQVHCWAWLHKYLPKDSNLLLEDVTW 618
Query: 192 KYTVINVVGPKAKQLLSELCDEDINLHPFSY---KRTDIGYASDVKLMGFTHTGEPGYCL 248
KYT +N++GP+A +LSEL + F K +GYA+ +++M THTGEPG+ L
Sbjct: 619 KYTALNLIGPRAVDVLSELSYAPMTPDHFPTLFCKEMSVGYANGIRVMSMTHTGEPGFML 678
Query: 249 YIPSEYALHVYQKIMTLGKDYNARDVGMFTQRYMRIEKFIPFWAEDLNSVTTPFESGSAY 308
YIP EYALHVY ++M++G+ Y R+ G + R +RIEKF FW +DLN++TTP E G
Sbjct: 679 YIPIEYALHVYNEVMSVGQKYGIRNAGYYALRSLRIEKFFAFWGQDLNTLTTPLECGGES 738
Query: 309 RVKLD 313
RVKL+
Sbjct: 739 RVKLE 743
Score = 121 (47.7 bits), Expect = 4.7e-74, Sum P(2) = 4.7e-74
Identities = 25/71 (35%), Positives = 39/71 (54%)
Query: 1 MNGNSLQGAGGIGRAVAEWMTHGEATQELLSFDVQRFLDLHNNRQYLQQRIREVVGSTYR 60
MN L GG G+ +AEWM +G ++ + D+QRF L +R +L+ R+ EV+ Y
Sbjct: 383 MNSAGLSLGGGAGKLLAEWMVYGYPSENVWELDLQRFGALQGSRTFLRHRVMEVMPLIYD 442
Query: 61 VGDPRPEMPPG 71
+ PR + G
Sbjct: 443 LKVPRWDFQTG 453
>UNIPROTKB|F1NG59 [details] [associations]
symbol:PDPR "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004047 "aminomethyltransferase activity" evidence=IEA]
[GO:0006546 "glycine catabolic process" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR006076 InterPro:IPR006222 Pfam:PF01266
Pfam:PF01571 GO:GO:0005739 GO:GO:0016491 GO:GO:0004047
GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669
GeneTree:ENSGT00530000063120 OMA:DWFDIVG EMBL:AADN02051588
EMBL:AADN02051589 IPI:IPI00581586 ProteinModelPortal:F1NG59
Ensembl:ENSGALT00000004241 Uniprot:F1NG59
Length = 887
Score = 653 (234.9 bits), Expect = 2.5e-73, Sum P(2) = 2.5e-73
Identities = 118/245 (48%), Positives = 168/245 (68%)
Query: 72 TFFKPKFFDFMEEEYRACFEGVGIIDMSSFSKIKITCSDESLVDWLQQLCSNDVNIPVGG 131
TF+KP +FD + E + C E V +IDMSSF+K +I+ + + + LQ L SND+++PVG
Sbjct: 508 TFYKPDWFDIVGSEVKCCKEAVCVIDMSSFTKFEISSTGDQALQSLQYLFSNDLDVPVGH 567
Query: 132 ISHTGMQNERGGYENDCILVRETETSYFMVSPTSQQTRVFEWMKNHLPTKHYITLSDVTS 191
+ HTGM NE GGYENDC + R ++ S+FM+SPT QQ + W+KNHLP +T+ DVT
Sbjct: 568 VVHTGMLNENGGYENDCSIARLSKRSFFMISPTDQQVHCWAWLKNHLPEDSNLTIEDVTW 627
Query: 192 KYTVINVVGPKAKQLLSELCDEDINLHPF-SY--KRTDIGYASDVKLMGFTHTGEPGYCL 248
KYT +N++GP+A +LSEL + F S+ K +GYA+ +++M THTGEPG+ L
Sbjct: 628 KYTALNLIGPRAVDVLSELSYAPMTPEHFPSFFCKEMSVGYANGIRVMSITHTGEPGFML 687
Query: 249 YIPSEYALHVYQKIMTLGKDYNARDVGMFTQRYMRIEKFIPFWAEDLNSVTTPFESGSAY 308
YIP EYALHVY ++M +G+ Y R+ G + R +RIEKF FW +DL++ TTP E G +
Sbjct: 688 YIPIEYALHVYNEVMNMGQKYGIRNAGYYALRSLRIEKFFAFWGQDLDAFTTPMECGREF 747
Query: 309 RVKLD 313
+VKL+
Sbjct: 748 QVKLE 752
Score = 106 (42.4 bits), Expect = 2.5e-73, Sum P(2) = 2.5e-73
Identities = 22/71 (30%), Positives = 39/71 (54%)
Query: 1 MNGNSLQGAGGIGRAVAEWMTHGEATQELLSFDVQRFLDLHNNRQYLQQRIREVVGSTYR 60
MN + GG G+ +AEWM +G ++ + D++RF L ++R +L+ R+ EV+
Sbjct: 392 MNSAGISYGGGAGKYLAEWMVNGYPSENVWPLDLKRFGTLQSSRTFLRHRVMEVMPLMCD 451
Query: 61 VGDPRPEMPPG 71
+ PR + G
Sbjct: 452 LKVPRWDFQTG 462
>FB|FBgn0029706 [details] [associations]
symbol:CG3626 species:7227 "Drosophila melanogaster"
[GO:0019909 "[pyruvate dehydrogenase (lipoamide)] phosphatase
regulator activity" evidence=ISS] [GO:0019910 "mitochondrial
pyruvate dehydrogenase (lipoamide) phosphatase complex"
evidence=ISS] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0004047 "aminomethyltransferase activity" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0006546
"glycine catabolic process" evidence=IEA] InterPro:IPR006076
InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571 GO:GO:0005737
GO:GO:0016491 GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977
Pfam:PF08669 eggNOG:COG0665 EMBL:AY128477 ProteinModelPortal:Q8MQN6
SMR:Q8MQN6 STRING:Q8MQN6 PaxDb:Q8MQN6 PRIDE:Q8MQN6
FlyBase:FBgn0029706 InParanoid:Q8MQN6 OrthoDB:EOG45DV49
ArrayExpress:Q8MQN6 Bgee:Q8MQN6 Uniprot:Q8MQN6
Length = 939
Score = 623 (224.4 bits), Expect = 8.6e-72, Sum P(2) = 8.6e-72
Identities = 119/247 (48%), Positives = 161/247 (65%)
Query: 72 TFFKPKFFDFMEEEYRACFEGVGIIDMSSFSKIKITCSDESLVDWLQQLCSNDVNIPVGG 131
TF KP +FD + EYRAC E +GI D S F+K +VD LQ LCSNDV++ VG
Sbjct: 533 TFGKPPWFDHVASEYRACRERIGIADYSPFTKYDFWSKGNEVVDLLQYLCSNDVDVAVGS 592
Query: 132 ISHTGMQNERGGYENDCILVRETETSYFMVSPTSQQTRVFEWMKNHLPT--KHYITLSDV 189
I HTGMQN GGYENDC L R +E Y M++ T QQTR W++ H+P + + ++DV
Sbjct: 593 IIHTGMQNPNGGYENDCSLARLSERHYMMIARTIQQTRSMCWIRKHMPNHLRAKVNVADV 652
Query: 190 TSKYTVINVVGPKAKQLLSELCDEDIN--LHPF-SYKRTDIGYASDVKLMGFTHTGEPGY 246
TS YT I ++GP ++ LLSEL D D+ PF +YK D+G A ++++ THTGE GY
Sbjct: 653 TSMYTAICILGPYSRILLSELTDTDLTPKSFPFFTYKELDVGLADGIRVLNITHTGELGY 712
Query: 247 CLYIPSEYALHVYQKIMTLGKDYNARDVGMFTQRYMRIEKFIPFWAEDLNSVTTPFESGS 306
LYIP+EYALHVY ++ G+ +N + G + R +RIEKF FW +DL++ TTP E G
Sbjct: 713 VLYIPNEYALHVYSRLYQAGQKFNIQHAGYYATRALRIEKFYAFWGQDLDTFTTPLECGR 772
Query: 307 AYRVKLD 313
++RVK +
Sbjct: 773 SWRVKFN 779
Score = 130 (50.8 bits), Expect = 8.6e-72, Sum P(2) = 8.6e-72
Identities = 27/72 (37%), Positives = 39/72 (54%)
Query: 3 GNSLQG---AGGIGRAVAEWMTHGEATQELLSFDVQRFLDLHNNRQYLQQRIREVVGSTY 59
GN G +GGIGR + + +T G +L D+ RFL LHNNR++L+ R +E G +
Sbjct: 410 GNKTMGVSASGGIGRVLTDLITKGSTYLDLHILDISRFLGLHNNRKFLRDRCKEAPGKHF 469
Query: 60 RVGDPRPEMPPG 71
+ P E G
Sbjct: 470 EINYPFEEFQTG 481
>WB|WBGene00013718 [details] [associations]
symbol:Y106G6H.5 species:6239 "Caenorhabditis elegans"
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0004047
"aminomethyltransferase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006546 "glycine catabolic process"
evidence=IEA] InterPro:IPR006076 InterPro:IPR006222 Pfam:PF01266
Pfam:PF01571 GO:GO:0005737 GO:GO:0016491 GO:GO:0004047
GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669 eggNOG:COG0665
EMBL:AL032631 HOGENOM:HOG000251716 GeneTree:ENSGT00530000063120
OMA:DWFDIVG RefSeq:NP_492730.2 ProteinModelPortal:Q9U300 SMR:Q9U300
STRING:Q9U300 PaxDb:Q9U300 EnsemblMetazoa:Y106G6H.5.1
EnsemblMetazoa:Y106G6H.5.2 GeneID:172922 KEGG:cel:CELE_Y106G6H.5
UCSC:Y106G6H.5.1 CTD:172922 WormBase:Y106G6H.5 InParanoid:Q9U300
NextBio:877543 Uniprot:Q9U300
Length = 855
Score = 513 (185.6 bits), Expect = 5.2e-59, Sum P(2) = 5.2e-59
Identities = 101/240 (42%), Positives = 153/240 (63%)
Query: 75 KPKFFDFMEEEYRACFEGVGIIDMSSFSKIKITCSDESLVDWLQQLCSNDVNIPVGGISH 134
KP++F+ + EY AC E VG++DMSSFSK IT E V++LQ LCS +V+ P+G +
Sbjct: 492 KPEWFERVASEYEACRERVGLMDMSSFSKYDIT--GEDAVEYLQFLCSANVDEPIGTTVY 549
Query: 135 TGMQNERGGYENDCILVRETETSYFMVSPTSQQTRVFEWMKN-HLPTKHYITLSDVTSKY 193
TGMQ+++GGY DC L R E +FMV+PT QQ RV WMK K + + DVT Y
Sbjct: 550 TGMQHQKGGYVTDCTLSRLGEKKFFMVAPTIQQERVLVWMKKWQAILKARVHVQDVTGAY 609
Query: 194 TVINVVGPKAKQLLSELCDEDI--NLHP-FSYKRTDIGYASDVKLMGFTHTGEPGYCLYI 250
T ++++GP ++ L+ ++ + N P F + +IG A+ ++ + TH GE G+ +Y+
Sbjct: 610 TALDLIGPSSRYLMGDITGLSMSSNDFPTFRCQEINIGMATGIRAISVTHCGELGWVIYV 669
Query: 251 PSEYALHVYQKIMTLGKDYNARDVGMFTQRYMRIEKFIPFWAEDLNSVTTPFESGSAYRV 310
P+E A +VY+KI+ GK+Y+ + G +T R +RIEKF +W +D+N+ TP E G +RV
Sbjct: 670 PNEVAQNVYEKILDAGKEYSLQHAGYYTLRQLRIEKFYVYWGQDINATVTPVECGRLFRV 729
Score = 123 (48.4 bits), Expect = 5.2e-59, Sum P(2) = 5.2e-59
Identities = 27/60 (45%), Positives = 35/60 (58%)
Query: 1 MNGNSLQGAGGIGRAVAEWMTHGEA-TQELLSFDVQRFLDLHNNRQYLQQRIREVVGSTY 59
MNG L AGG+G+ + E M ++ T ++ DV RF+DLH N QYL R EV TY
Sbjct: 369 MNGQGLSLAGGLGKILGELMCESQSSTADVARVDVGRFIDLHANNQYLIGRTPEVAALTY 428
>ZFIN|ZDB-GENE-040426-1220 [details] [associations]
symbol:ypel5 "yippee-like 5" species:7955 "Danio
rerio" [GO:0004047 "aminomethyltransferase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006546 "glycine
catabolic process" evidence=IEA] InterPro:IPR006222 Pfam:PF01571
Pfam:PF03226 ZFIN:ZDB-GENE-040426-1220 GO:GO:0005737 GO:GO:0004047
GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669 eggNOG:COG0404
InterPro:IPR004910 OrthoDB:EOG4NZTSJ EMBL:BC055193 IPI:IPI00494611
ProteinModelPortal:Q7SXY9 STRING:Q7SXY9 NextBio:20814486
Uniprot:Q7SXY9
Length = 424
Score = 556 (200.8 bits), Expect = 8.9e-54, P = 8.9e-54
Identities = 99/199 (49%), Positives = 138/199 (69%)
Query: 118 QQLCSNDVNIPVGGISHTGMQNERGGYENDCILVRETETSYFMVSPTSQQTRVFEWMKNH 177
Q+LC+ND+++PVG I HTGM N RGGYENDC +VR ++ S+F++SPT QQ + WMK H
Sbjct: 92 QRLCANDLDVPVGHIVHTGMLNARGGYENDCSVVRLSKNSFFIISPTDQQVHCWSWMKQH 151
Query: 178 LPTKHYITLSDVTSKYTVINVVGPKAKQLLSELCDEDINLHPFSY---KRTDIGYASDVK 234
+P+ + L DV+ KYT +N++GP+A +LSEL + F K +GYA+ ++
Sbjct: 152 MPSDPQLHLEDVSWKYTALNLIGPRAMDVLSELSYVSMTPEHFPSLFCKEMSVGYANGIR 211
Query: 235 LMGFTHTGEPGYCLYIPSEYALHVYQKIMTLGKDYNARDVGMFTQRYMRIEKFIPFWAED 294
+M THTGEPG+ LYIP EYALHVY ++M++G+ Y R+ G + R +RIEKF FW +D
Sbjct: 212 VMSMTHTGEPGFMLYIPIEYALHVYNEVMSVGQKYGIRNAGYYALRSLRIEKFFAFWGQD 271
Query: 295 LNSVTTPFESGSAYRVKLD 313
L+S TTP E G +RVK D
Sbjct: 272 LDSFTTPLECGREFRVKFD 290
>TIGR_CMR|SPO_2436 [details] [associations]
symbol:SPO_2436 "FAD dependent oxidoreductase/aminomethyl
transferase" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004047
"aminomethyltransferase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] [GO:0016491 "oxidoreductase
activity" evidence=ISS] [GO:0050660 "flavin adenine dinucleotide
binding" evidence=ISS] InterPro:IPR006076 InterPro:IPR006222
Pfam:PF01266 Pfam:PF01571 GO:GO:0005737 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0016491 GO:GO:0004047 GO:GO:0006546
InterPro:IPR013977 Pfam:PF08669 HOGENOM:HOG000251716
ProtClustDB:CLSK863205 RefSeq:YP_167653.1 ProteinModelPortal:Q5LQQ2
GeneID:3194123 KEGG:sil:SPO2436 PATRIC:23378269 OMA:FREVYDI
Uniprot:Q5LQQ2
Length = 812
Score = 327 (120.2 bits), Expect = 3.6e-35, Sum P(2) = 3.6e-35
Identities = 75/245 (30%), Positives = 129/245 (52%)
Query: 72 TFFKPKFFDFMEEEYRACFEGVGIIDMSSFSKIKITCSDESLVDWLQQLCSNDVNIPVGG 131
+F++P +FD + E RA G+ID S K+ + D +LQ+ C+ND+ +PVG
Sbjct: 461 SFYRPGWFDHAQAEQRAVRGAAGLIDYSMLGKLMVEGRDAEA--FLQRACTNDMALPVGR 518
Query: 132 ISHTGMQNERGGYENDCILVRETETSYFMVSPTSQQTRVFEWMKNHLPTKHYITLSDVTS 191
+++T M N+ GG E+D + R S+ ++S S R + ++N + + L D TS
Sbjct: 519 VAYTLMLNDHGGIESDVTVARHGPDSFMVMSAISHTRRDRDHLRNLIRPDEDVRLRDATS 578
Query: 192 KYTVINVVGPKAKQLLSELCDEDIN--LHPF-SYKRTDIGYASDVKLMGFTHTGEPGYCL 248
Y V+++ GPK++Q+L+++ D D++ PF S R IG+A V ++TG+ G+ +
Sbjct: 579 AYAVLSLCGPKSRQILADVADIDLSDAAFPFNSLARFHIGHAP-VFAQRLSYTGDLGWEI 637
Query: 249 YIPSEYALHVYQKIMTLGKDYNARDVGMFTQRYMRIEKFIPFWAEDLNSVTTPFESGSAY 308
++ ++A HV+ +M G R VG +RIE W D+ P + G +
Sbjct: 638 FVTPDFAEHVFDVLMASGAPQGLRLVGGEALNALRIEAGFAHWGHDMAYTEAPHQVGLGF 697
Query: 309 RVKLD 313
K D
Sbjct: 698 VCKPD 702
Score = 89 (36.4 bits), Expect = 3.6e-35, Sum P(2) = 3.6e-35
Identities = 20/64 (31%), Positives = 29/64 (45%)
Query: 1 MNGNSLQGAGGIGRAVAEWMTHGEATQELLSFDVQRFLDLHNNRQYLQQRIREVVGSTYR 60
+N +Q G GRAVA+W+ G +L D R + YL+ R E + TY
Sbjct: 348 VNSTGIQSGSGAGRAVADWIMTGHPPMDLSEMDPARIEEWQARDPYLRDRCPETLVLTYA 407
Query: 61 VGDP 64
+ P
Sbjct: 408 MHWP 411
>TIGR_CMR|SPO_3396 [details] [associations]
symbol:SPO_3396 "FAD dependent oxidoreductase/aminomethyl
transferase" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004047
"aminomethyltransferase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] [GO:0016491 "oxidoreductase
activity" evidence=ISS] [GO:0050660 "flavin adenine dinucleotide
binding" evidence=ISS] InterPro:IPR006076 InterPro:IPR006222
Pfam:PF01266 Pfam:PF01571 GO:GO:0005737 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0016491 GO:GO:0004047 GO:GO:0006546
InterPro:IPR013977 Pfam:PF08669 HOGENOM:HOG000251716 OMA:DWFDIVG
KO:K00314 ProtClustDB:CLSK863205 RefSeq:YP_168592.1
ProteinModelPortal:Q5LN16 GeneID:3195707 KEGG:sil:SPO3396
PATRIC:23380247 Uniprot:Q5LN16
Length = 816
Score = 296 (109.3 bits), Expect = 8.3e-34, Sum P(2) = 8.3e-34
Identities = 72/243 (29%), Positives = 128/243 (52%)
Query: 75 KPKFFDFMEEEYRACFEGVGIIDMSSFSKIKITCSDESLVDWLQQLCSNDVNIPVGGISH 134
+ FFD + EE++A G+G+ DMSSF KI++ D + +L + ++PVG I +
Sbjct: 468 RQNFFDNVAEEHKAIRTGLGMYDMSSFGKIRVEGPDATA--YLNHIAGGQFDVPVGRIVY 525
Query: 135 TGMQNERGGYENDCILVRETETSYFMVSPTSQQTRVFEWMKN-HLPTKHYITLSDVTSKY 193
T N GG E D + R +ET+Y +V+P + TR + + L + ++DVT+
Sbjct: 526 TQFLNVNGGIEADVTVTRLSETAYLVVTPAA--TRYADQTRMMRLVGDFRVVITDVTAGE 583
Query: 194 TVINVVGPKAKQLLSELCDEDIN--LHPF-SYKRTDIGYASDVKLMGFTHTGEPGYCLYI 250
V+ V+GPKA++L++ + D + ++PF + + ++G ++ T+ GE G+ +Y+
Sbjct: 584 GVLAVMGPKARELMARVSPNDFSNDVNPFGTAQEIELGMGL-ARVHRVTYVGELGWEIYV 642
Query: 251 PSEYALHVYQKIMTLGKDYNARDVGMFTQRYMRIEKFIPFWAEDLNSVTTPFESGSAYRV 310
S+ A H ++ + G+D + GM RIEK + D+ E+G + V
Sbjct: 643 SSDMAGHAFETLFEAGQDLGMKLCGMHVMDCCRIEKAFRHFGHDITPEDHVLEAGLGFAV 702
Query: 311 KLD 313
K D
Sbjct: 703 KTD 705
Score = 108 (43.1 bits), Expect = 8.3e-34, Sum P(2) = 8.3e-34
Identities = 21/58 (36%), Positives = 31/58 (53%)
Query: 2 NGNSLQGAGGIGRAVAEWMTHGEATQELLSFDVQRFLDLHNNRQYLQQRIREVVGSTY 59
N +Q AGG G A+++WM GE +L D+ R N++YL +R E +G Y
Sbjct: 353 NSIGIQSAGGAGHALSQWMDSGEKPFDLGDVDIARMQPFQGNKRYLVERSTETLGLLY 410
>TIGR_CMR|SPO_A0311 [details] [associations]
symbol:SPO_A0311 "FAD dependent
oxidoreductase/aminomethyl transferase" species:246200 "Ruegeria
pomeroyi DSS-3" [GO:0003824 "catalytic activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR006076
InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571 GO:GO:0005737
GO:GO:0016491 GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977
Pfam:PF08669 EMBL:CP000032 GenomeReviews:CP000032_GR
HOGENOM:HOG000251716 RefSeq:YP_165138.1 ProteinModelPortal:Q5LKS0
GeneID:3196955 KEGG:sil:SPOA0311 PATRIC:23381968 OMA:KLRCSPL
ProtClustDB:CLSK863205 Uniprot:Q5LKS0
Length = 799
Score = 275 (101.9 bits), Expect = 3.3e-32, Sum P(2) = 3.3e-32
Identities = 74/238 (31%), Positives = 118/238 (49%)
Query: 70 PGTFFKPKFFDFMEEEYRACFEGVGIIDMSSFSKIKITCSDESLVDWLQQLCSNDVNIPV 129
P TF PK+ D + E AC G I+D S+F KI + D +L +LC+ ++I
Sbjct: 460 PLTFGIPKWRDQVAREVDACRNGAAILDQSAFGKIMVQGPDACT--FLNRLCAAQMDIAE 517
Query: 130 GGISHTGMQNERGGYENDCILVRETETSYFMVSPTSQQTRVFEWMKNHLPTKHYITLSDV 189
G I++T + N RGG E+D + R +Y M+ + R + M+ + +DV
Sbjct: 518 GRIAYTQILNARGGVESDLTVQRHGPETYLMIVGAGEVVRDMKRMRE-TRGDFRVEFTDV 576
Query: 190 TSKYTVINVVGPKAKQLLSELCDEDI-NLHPFSYKRTDIGYASD-VKLMGFTHTGEPGYC 247
TS Y I + G KA+++L + + +L F + +IG A + FT GE GY
Sbjct: 577 TSGYAAIGLAGTKAREVLQATTNTPVPDLKRFRFAPVEIGLARGWAGRLSFT--GEEGYE 634
Query: 248 LYIPSEYALHVYQKIMTLGKDYNARDVGMFTQRYMRIEKFIPFWAEDLNSVTTPFESG 305
LY+PS+ A+ ++ ++ G A G+F +RIE + +L TTP E+G
Sbjct: 635 LYVPSDMAMAAHEALVAAG----ATHAGLFASGSLRIESGFRAFGHELTPGTTPQEAG 688
Score = 114 (45.2 bits), Expect = 3.3e-32, Sum P(2) = 3.3e-32
Identities = 28/66 (42%), Positives = 37/66 (56%)
Query: 1 MNGNSLQGAGGIGRAVAEWMTHGEATQELLSFDVQRFLDLHNNRQYLQQRIREVVGSTYR 60
MN + AGG GRA+AEW+ GE T EL D++RF + L+ RI EV+G Y
Sbjct: 351 MNSTGIALAGGAGRAMAEWIIAGEPTMELNEADIRRFSPEMDVLGALEARIPEVLGRHY- 409
Query: 61 VGDPRP 66
+P P
Sbjct: 410 -DNPYP 414
>ZFIN|ZDB-GENE-040426-996 [details] [associations]
symbol:sardh "sarcosine dehydrogenase" species:7955
"Danio rerio" [GO:0004047 "aminomethyltransferase activity"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0006546 "glycine
catabolic process" evidence=IEA] InterPro:IPR006076
InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571
ZFIN:ZDB-GENE-040426-996 GO:GO:0005737 GO:GO:0016491 GO:GO:0004047
GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669
GeneTree:ENSGT00530000063120 EMBL:AL935290 EMBL:BX323065
EMBL:BX537125 EMBL:CU524648 IPI:IPI00481475
Ensembl:ENSDART00000080904 Ensembl:ENSDART00000131043
Uniprot:F1Q4Q8
Length = 924
Score = 263 (97.6 bits), Expect = 9.1e-30, Sum P(2) = 9.1e-30
Identities = 79/258 (30%), Positives = 118/258 (45%)
Query: 72 TFFKPKFFDFMEEEYRACFEGVGIIDMSSFSKIKITCSD-ESLVDWLQQLCSNDVNIPVG 130
TF P D + +E C V + DMS F K ++ D + DWL + DVN G
Sbjct: 544 TFDFPPHHDVIRDECLTCRNAVAVFDMSYFGKFYLSGPDAKKAADWL---FTADVNKAPG 600
Query: 131 GISHTGMQNERGGYENDCILVR-ETETSYFMVSPTSQQTRVF----------EW--MKNH 177
+T M N+RGG E+D + R E S+ ++P + W +++
Sbjct: 601 STVYTCMLNQRGGVESDLTVSRLEPSPSHLPLTPEFNGDAYYLAIGGGVAQHNWSHIQSV 660
Query: 178 LPTKHY-ITLSDVTSKYTVINVVGPKAKQLLSELCDEDIN--LHPFSYKRTDIGYASDVK 234
L + + TL D T +I++ GPK+++LL E+ D +++ PFS R V+
Sbjct: 661 LQDQGFRCTLIDHTEDMGMISIQGPKSRELLQEVLDSELSNEAFPFSTHRIVSAAGHQVR 720
Query: 235 LMGFTHTGEPGYCLYIPSEYALHVYQKIMTLGKDYNARDVGMFTQRYMRIEKFIPFWAED 294
M + GE G+ L+IP E L VY +M G Y + G + IEK W D
Sbjct: 721 AMRLSFVGEMGWELHIPKESCLPVYNAVMAAGAKYGICNAGYRAIDSLSIEKGYRHWHAD 780
Query: 295 LNSVTTPFESGSAYRVKL 312
L TP E+G A+ KL
Sbjct: 781 LRPDDTPLEAGLAFTCKL 798
Score = 105 (42.0 bits), Expect = 9.1e-30, Sum P(2) = 9.1e-30
Identities = 23/85 (27%), Positives = 41/85 (48%)
Query: 2 NGNSLQGAGGIGRAVAEWMTHGEATQELLSFDVQRFL-DLHNNRQYLQQRIREVVGSTYR 60
N + GG G+ +A W+ HG +++ +D++RF L NN +++++R E Y
Sbjct: 407 NSAGMMLGGGCGKELAHWIIHGRPEKDMYGYDIRRFHHSLTNNNRWIRERSHESYAKNYS 466
Query: 61 VGDPRPE-MPPGTFFKPKFFDFMEE 84
V P E + K F ++E
Sbjct: 467 VVFPFDEPLASRNMRKDPFHQVLQE 491
>MGI|MGI:1921379 [details] [associations]
symbol:Dmgdh "dimethylglycine dehydrogenase precursor"
species:10090 "Mus musculus" [GO:0004047 "aminomethyltransferase
activity" evidence=IEA] [GO:0005542 "folic acid binding"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISO;IDA] [GO:0006544 "glycine metabolic
process" evidence=ISO] [GO:0006546 "glycine catabolic process"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0047865 "dimethylglycine dehydrogenase activity" evidence=ISO]
[GO:0050660 "flavin adenine dinucleotide binding" evidence=ISO]
[GO:0055114 "oxidation-reduction process" evidence=ISO]
InterPro:IPR006076 InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571
UniPathway:UPA00291 MGI:MGI:1921379 GO:GO:0005739 GO:GO:0050660
EMBL:AC131739 GO:GO:0006579 EMBL:CT030023 GO:GO:0004047
GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669 GO:GO:0005542
eggNOG:COG0665 CTD:29958 HOGENOM:HOG000251716 HOVERGEN:HBG081945
KO:K00315 OMA:REVGKMI OrthoDB:EOG466VK7 GO:GO:0047865 EMBL:AK004755
EMBL:BC024126 IPI:IPI00120123 RefSeq:NP_083048.1 UniGene:Mm.21789
ProteinModelPortal:Q9DBT9 SMR:Q9DBT9 STRING:Q9DBT9
PhosphoSite:Q9DBT9 PaxDb:Q9DBT9 PRIDE:Q9DBT9
Ensembl:ENSMUST00000048001 GeneID:74129 KEGG:mmu:74129
UCSC:uc007rll.1 GeneTree:ENSGT00530000063120 InParanoid:B1B1D0
NextBio:339854 Bgee:Q9DBT9 CleanEx:MM_DMGDH Genevestigator:Q9DBT9
GermOnline:ENSMUSG00000042102 Uniprot:Q9DBT9
Length = 869
Score = 268 (99.4 bits), Expect = 9.2e-30, Sum P(2) = 9.2e-30
Identities = 67/259 (25%), Positives = 129/259 (49%)
Query: 59 YRVGDPRPEMPPGTFFKPKFFDFMEEEYRACFEGVGIIDMSSFSKIKITCSDESLVDWLQ 118
Y+ G P +F + +F+ + EY+ + VG+ID+S F K I D + + L
Sbjct: 490 YKPGQDTQYRP--SFRRTNWFEPVGSEYKQVMQRVGVIDLSPFGKFNIKGRDSTQL--LD 545
Query: 119 QLCSNDV-NIPVGGISHTGMQNERGGYENDCILVRETETSYFMVSPTSQQTRVFEWMKNH 177
L +N + + ISH M RG + + +++ + +++ + + W++
Sbjct: 546 HLFANVIPKVGFTNISH--MLTPRGRVYAELTVSQQSPGEFLLITGSGSELHDLRWIEEA 603
Query: 178 LPTKHY-ITLSDVTSKYTVINVVGPKAKQLLSELCDEDINLHPFSYKRTDIGYASDVKLM 236
Y + + ++T ++ V+ V GP A+++L +L ED++ F + +T SD+ +
Sbjct: 604 AFRGGYDVEIQNITDEFGVLGVAGPYARRVLQKLTSEDLSDDAFKFLQTKSFNISDIPVT 663
Query: 237 GF--THTGEPGYCLYIPSEYALHVYQKIMTLGKDYNARDVGMFTQRYMRIEKFIPFWAED 294
++TGE G+ LY E + +Y++IM+ G++ D G + +R+EK W +
Sbjct: 664 AIRISYTGELGWELYHRREDSATLYERIMSAGQEEGIGDFGTYALNALRLEKAFRAWGSE 723
Query: 295 LNSVTTPFESGSAYRVKLD 313
+N T P E+G Y VKL+
Sbjct: 724 MNCDTNPLEAGLEYFVKLN 742
Score = 99 (39.9 bits), Expect = 9.2e-30, Sum P(2) = 9.2e-30
Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 3 GNSLQGAGGIGRAVAEWMTHGEATQELLSFDVQRFLDLHNNRQYLQQRIREVVGSTYRVG 62
G + AGG+G+ +++W+ HGE +L+ D R+ QY + + RE G VG
Sbjct: 391 GYGIIHAGGVGKFLSDWILHGEPPFDLIELDPNRY-GKWTTTQYTEAKARESYGFNNIVG 449
Query: 63 DPRPE 67
P+ E
Sbjct: 450 YPKEE 454
Score = 42 (19.8 bits), Expect = 8.5e-24, Sum P(2) = 8.5e-24
Identities = 10/26 (38%), Positives = 13/26 (50%)
Query: 17 AEWMTHGEAT---QELLSFDVQRFLD 39
A W+THG +EL D+ R D
Sbjct: 315 ASWVTHGVPPGFGKELFESDLDRISD 340
>RGD|620453 [details] [associations]
symbol:Dmgdh "dimethylglycine dehydrogenase" species:10116
"Rattus norvegicus" [GO:0004047 "aminomethyltransferase activity"
evidence=IEA] [GO:0005542 "folic acid binding" evidence=IDA]
[GO:0005739 "mitochondrion" evidence=IEA;ISO;IDA;TAS] [GO:0006544
"glycine metabolic process" evidence=ISO] [GO:0006546 "glycine
catabolic process" evidence=IEA] [GO:0006579 "amino-acid betaine
catabolic process" evidence=IEA] [GO:0019695 "choline metabolic
process" evidence=TAS] [GO:0042426 "choline catabolic process"
evidence=TAS] [GO:0047865 "dimethylglycine dehydrogenase activity"
evidence=IEA;ISO;IDA;TAS] [GO:0050660 "flavin adenine dinucleotide
binding" evidence=IDA;TAS] InterPro:IPR006076 InterPro:IPR006222
Pfam:PF01266 Pfam:PF01571 UniPathway:UPA00291 RGD:620453
GO:GO:0005739 GO:GO:0050660 GO:GO:0042426 GO:GO:0006579
GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669
GO:GO:0005542 eggNOG:COG0665 HOGENOM:HOG000251716
HOVERGEN:HBG081945 OrthoDB:EOG466VK7 GO:GO:0047865 EMBL:X55995
IPI:IPI00207941 PIR:S16133 UniGene:Rn.3646
ProteinModelPortal:Q63342 STRING:Q63342 PhosphoSite:Q63342
PRIDE:Q63342 UCSC:RGD:620453 InParanoid:Q63342
BioCyc:MetaCyc:MONOMER-16117 BRENDA:1.5.99.2 ArrayExpress:Q63342
Genevestigator:Q63342 GermOnline:ENSRNOG00000023588 Uniprot:Q63342
Length = 857
Score = 262 (97.3 bits), Expect = 3.9e-29, Sum P(2) = 3.9e-29
Identities = 66/259 (25%), Positives = 126/259 (48%)
Query: 59 YRVGDPRPEMPPGTFFKPKFFDFMEEEYRACFEGVGIIDMSSFSKIKITCSDESLVDWLQ 118
Y+ G P +F + +F + EY+ + VG+ID+S F K I D + + L
Sbjct: 490 YKPGQDTQYRP--SFRRTNWFRPVGSEYKQVMQRVGVIDLSPFGKFNIKGQDSTQL--LD 545
Query: 119 QLCSNDV-NIPVGGISHTGMQNERGGYENDCILVRETETSYFMVSPTSQQTRVFEWMKNH 177
LC+N + + ISH M RG + + ++ + +++ + + W++
Sbjct: 546 HLCANVIPKVGFTNISH--MLTPRGRVYAELTVSHQSPGEFLLITGSGSELHDLRWIEEA 603
Query: 178 LPTKHY-ITLSDVTSKYTVINVVGPKAKQLLSELCDEDINLHPFSYKRTDIGYASDVKLM 236
Y + + ++T + V+ V GP A+++L +L ED++ F + +T SD+ +
Sbjct: 604 AVRGGYDVEIRNITDELGVLGVAGPYARRVLQKLTSEDLSDDVFKFLQTKSLKISDIPVT 663
Query: 237 GF--THTGEPGYCLYIPSEYALHVYQKIMTLGKDYNARDVGMFTQRYMRIEKFIPFWAED 294
++TGE G+ LY E + +Y++IM G++ + G + +R+EK W +
Sbjct: 664 AIRISYTGELGWELYHRREDSAALYERIMNAGQEEGIDNFGTYALNALRLEKAFRAWGSE 723
Query: 295 LNSVTTPFESGSAYRVKLD 313
+N T P E+G Y +KL+
Sbjct: 724 MNCDTNPLEAGLDYFIKLN 742
Score = 99 (39.9 bits), Expect = 3.9e-29, Sum P(2) = 3.9e-29
Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 3 GNSLQGAGGIGRAVAEWMTHGEATQELLSFDVQRFLDLHNNRQYLQQRIREVVGSTYRVG 62
G + AGG+G+ +++W+ HGE +L+ D R+ QY + + RE G VG
Sbjct: 391 GYGIIHAGGVGKYLSDWILHGEPPFDLIELDPNRY-GKWTTTQYTEAKARESYGFNNIVG 449
Query: 63 DPRPE 67
P+ E
Sbjct: 450 YPKEE 454
>UNIPROTKB|Q63342 [details] [associations]
symbol:Dmgdh "Dimethylglycine dehydrogenase, mitochondrial"
species:10116 "Rattus norvegicus" [GO:0004047
"aminomethyltransferase activity" evidence=IEA] [GO:0006546
"glycine catabolic process" evidence=IEA] InterPro:IPR006076
InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571 UniPathway:UPA00291
RGD:620453 GO:GO:0005739 GO:GO:0050660 GO:GO:0042426 GO:GO:0006579
GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669
GO:GO:0005542 eggNOG:COG0665 HOGENOM:HOG000251716
HOVERGEN:HBG081945 OrthoDB:EOG466VK7 GO:GO:0047865 EMBL:X55995
IPI:IPI00207941 PIR:S16133 UniGene:Rn.3646
ProteinModelPortal:Q63342 STRING:Q63342 PhosphoSite:Q63342
PRIDE:Q63342 UCSC:RGD:620453 InParanoid:Q63342
BioCyc:MetaCyc:MONOMER-16117 BRENDA:1.5.99.2 ArrayExpress:Q63342
Genevestigator:Q63342 GermOnline:ENSRNOG00000023588 Uniprot:Q63342
Length = 857
Score = 262 (97.3 bits), Expect = 3.9e-29, Sum P(2) = 3.9e-29
Identities = 66/259 (25%), Positives = 126/259 (48%)
Query: 59 YRVGDPRPEMPPGTFFKPKFFDFMEEEYRACFEGVGIIDMSSFSKIKITCSDESLVDWLQ 118
Y+ G P +F + +F + EY+ + VG+ID+S F K I D + + L
Sbjct: 490 YKPGQDTQYRP--SFRRTNWFRPVGSEYKQVMQRVGVIDLSPFGKFNIKGQDSTQL--LD 545
Query: 119 QLCSNDV-NIPVGGISHTGMQNERGGYENDCILVRETETSYFMVSPTSQQTRVFEWMKNH 177
LC+N + + ISH M RG + + ++ + +++ + + W++
Sbjct: 546 HLCANVIPKVGFTNISH--MLTPRGRVYAELTVSHQSPGEFLLITGSGSELHDLRWIEEA 603
Query: 178 LPTKHY-ITLSDVTSKYTVINVVGPKAKQLLSELCDEDINLHPFSYKRTDIGYASDVKLM 236
Y + + ++T + V+ V GP A+++L +L ED++ F + +T SD+ +
Sbjct: 604 AVRGGYDVEIRNITDELGVLGVAGPYARRVLQKLTSEDLSDDVFKFLQTKSLKISDIPVT 663
Query: 237 GF--THTGEPGYCLYIPSEYALHVYQKIMTLGKDYNARDVGMFTQRYMRIEKFIPFWAED 294
++TGE G+ LY E + +Y++IM G++ + G + +R+EK W +
Sbjct: 664 AIRISYTGELGWELYHRREDSAALYERIMNAGQEEGIDNFGTYALNALRLEKAFRAWGSE 723
Query: 295 LNSVTTPFESGSAYRVKLD 313
+N T P E+G Y +KL+
Sbjct: 724 MNCDTNPLEAGLDYFIKLN 742
Score = 99 (39.9 bits), Expect = 3.9e-29, Sum P(2) = 3.9e-29
Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 3 GNSLQGAGGIGRAVAEWMTHGEATQELLSFDVQRFLDLHNNRQYLQQRIREVVGSTYRVG 62
G + AGG+G+ +++W+ HGE +L+ D R+ QY + + RE G VG
Sbjct: 391 GYGIIHAGGVGKYLSDWILHGEPPFDLIELDPNRY-GKWTTTQYTEAKARESYGFNNIVG 449
Query: 63 DPRPE 67
P+ E
Sbjct: 450 YPKEE 454
>UNIPROTKB|B4E1J9 [details] [associations]
symbol:DMGDH "cDNA FLJ50354, highly similar to
Dimethylglycine dehydrogenase, mitochondrial (EC 1.5.99.2)"
species:9606 "Homo sapiens" [GO:0004047 "aminomethyltransferase
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006546 "glycine catabolic process" evidence=IEA]
InterPro:IPR006222 Pfam:PF01571 GO:GO:0005737 EMBL:AC020937
EMBL:AC008502 GO:GO:0004047 GO:GO:0006546 EMBL:AC016559
UniGene:Hs.655653 HGNC:HGNC:24475 EMBL:AK303873 IPI:IPI01013014
SMR:B4E1J9 STRING:B4E1J9 Ensembl:ENST00000540686 UCSC:uc011ctg.1
Uniprot:B4E1J9
Length = 394
Score = 244 (91.0 bits), Expect = 6.3e-29, Sum P(2) = 6.3e-29
Identities = 68/280 (24%), Positives = 130/280 (46%)
Query: 47 LQQRIREVVGSTYRVGDPRPEM--PPG--TFFKPKF-----FDFMEEEYRACFEGVGIID 97
L QR+ + G +P PG T ++P F F+ + EY+ + V + D
Sbjct: 94 LYQRLESKCSMGFHAGWEQPHWFYKPGQDTQYRPSFRRTNWFEPVGSEYKQVMQRVAVTD 153
Query: 98 MSSFSKIKITCSDESLVDWLQQLCSNDV-NIPVGGISHTGMQNERGGYENDCILVRETET 156
+S F K I D + L L +N + + ISH M +G + + ++
Sbjct: 154 LSPFGKFNIKGQDS--IRLLDHLFANVIPKVGFTNISH--MLTPKGRVYAELTVSHQSPG 209
Query: 157 SYFMVSPTSQQTRVFEWMKNHLPTKHY-ITLSDVTSKYTVINVVGPKAKQLLSELCDEDI 215
+ +++ + + W++ Y + + ++T + V+ V GP+A+++L +L ED+
Sbjct: 210 EFLLITGSGSELHDLRWIEEEAVKGGYDVEIKNITDELGVLGVAGPQARKVLQKLTSEDL 269
Query: 216 NLHPFSYKRTDIGYASDVKLMGF--THTGEPGYCLYIPSEYALHVYQKIMTLGKDYNARD 273
+ F + +T S++ + ++TGE G+ LY E ++ +Y IM G++ +
Sbjct: 270 SDDVFKFLQTKSLKVSNIPVTAIRISYTGELGWELYHRREDSVALYDAIMNAGQEEGIDN 329
Query: 274 VGMFTQRYMRIEKFIPFWAEDLNSVTTPFESGSAYRVKLD 313
G + +R+EK W ++N T P E+G Y VKL+
Sbjct: 330 FGTYAMNALRLEKAFRAWGLEMNCDTNPLEAGLEYFVKLN 369
Score = 98 (39.6 bits), Expect = 6.3e-29, Sum P(2) = 6.3e-29
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 9 AGGIGRAVAEWMTHGEATQELLSFDVQRFLDLHNNRQYLQQRIREVVGSTYRVGDPRPE 67
AGG+G+ +++W+ HGE +L+ D R+ QY + + RE G VG P+ E
Sbjct: 24 AGGVGKYLSDWILHGEPPFDLIELDPNRY-GKWTTTQYTEAKARESYGFNNIVGYPKEE 81
>UNIPROTKB|F1RF50 [details] [associations]
symbol:DMGDH "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0047865 "dimethylglycine dehydrogenase activity"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0006546
"glycine catabolic process" evidence=IEA] [GO:0004047
"aminomethyltransferase activity" evidence=IEA] InterPro:IPR006076
InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571 GO:GO:0005739
GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669
OMA:REVGKMI GO:GO:0047865 GeneTree:ENSGT00530000063120
EMBL:CU468550 Ensembl:ENSSSCT00000015413 ArrayExpress:F1RF50
Uniprot:F1RF50
Length = 866
Score = 252 (93.8 bits), Expect = 4.7e-28, Sum P(2) = 4.7e-28
Identities = 70/258 (27%), Positives = 123/258 (47%)
Query: 65 RPEMPPG---TFFKPKFFDFMEEEYRACFEGVGIIDMSSFSKIKITCSDESLVDWLQQLC 121
+P+ PG +F + +F+ + EY+ + VG+ID+S F K + D V L L
Sbjct: 498 KPDQDPGYRPSFRRTNWFEPVGSEYKQVMQKVGVIDLSPFGKFTVKGQDS--VRLLDHLF 555
Query: 122 SNDV-NIPVGGISHTGMQNERGGYENDCILVRETETSYFMVSPTSQQTRV--FEWMKNHL 178
+N + + ISH R E DC T++ VSP + +W++
Sbjct: 556 ANVIPQVGCTNISHMLTPKGRVYAEFDCSHQSPTQS----VSPEKSSVTITSIKWIEEEA 611
Query: 179 PTKHY-ITLSDVTSKYTVINVVGPKAKQLLSELCDEDINLHPFSYKRTDIGYASDVKLMG 237
T Y + + ++T V+ V GP A+++L +L ED++ F + +T +++ +
Sbjct: 612 VTGGYNVEIKNMTDVLGVLGVAGPHARKVLQKLTSEDLSDGAFKFLQTKAFKVANIPVTA 671
Query: 238 F--THTGEPGYCLYIPSEYALHVYQKIMTLGKDYNARDVGMFTQRYMRIEKFIPFWAEDL 295
++TGE G+ LY E + +Y IM G++ + G + +R+EK W ++
Sbjct: 672 IRISYTGELGWELYHRREDSAALYDIIMNAGQEEGIDNFGTYAMNALRLEKAFRAWGSEM 731
Query: 296 NSVTTPFESGSAYRVKLD 313
N T P E+G Y VKL+
Sbjct: 732 NCDTNPLEAGLEYFVKLN 749
Score = 99 (39.9 bits), Expect = 4.7e-28, Sum P(2) = 4.7e-28
Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 3 GNSLQGAGGIGRAVAEWMTHGEATQELLSFDVQRFLDLHNNRQYLQQRIREVVGSTYRVG 62
G + AGG+G+ +++W+ HGE +L+ D R+ QY + + RE G VG
Sbjct: 398 GYGIIHAGGVGKYLSDWILHGEPPFDLIELDPNRY-GKWTTTQYTEAKARESYGFNNIVG 456
Query: 63 DPRPE 67
P+ E
Sbjct: 457 YPKEE 461
>UNIPROTKB|F1PK75 [details] [associations]
symbol:DMGDH "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0006546 "glycine catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0004047
"aminomethyltransferase activity" evidence=IEA] InterPro:IPR006076
InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571 GO:GO:0005737
GO:GO:0016491 GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977
Pfam:PF08669 GeneTree:ENSGT00530000063120 EMBL:AAEX03002116
EMBL:AAEX03002117 EMBL:AAEX03002118 Ensembl:ENSCAFT00000014573
Uniprot:F1PK75
Length = 794
Score = 250 (93.1 bits), Expect = 5.8e-28, Sum P(2) = 5.8e-28
Identities = 64/259 (24%), Positives = 123/259 (47%)
Query: 59 YRVGDPRPEMPPGTFFKPKFFDFMEEEYRACFEGVGIIDMSSFSKIKITCSDESLVDWLQ 118
Y+ G P +F + +F+ + EY+ + VG+ID+S F K I D V L
Sbjct: 425 YKPGQDTQYRP--SFRRTNWFEPVGSEYKQVMQKVGVIDLSPFGKFNIKGQDS--VRLLD 480
Query: 119 QLCSNDV-NIPVGGISHTGMQNERGGYENDCILVRETETSYFMVSPTSQQTRVFEWMKNH 177
L +N + + ISH M +G + + +T + +++ + + W++
Sbjct: 481 HLFANVIPKVGFTNISH--MLTPKGRVYAELTVSHQTPGEFLLITGSGSELHDLRWIEEE 538
Query: 178 LPTKHY-ITLSDVTSKYTVINVVGPKAKQLLSELCDEDINLHPFSYKRTDIGYASDVKLM 236
Y + + ++T + V+ + GP A+++L +L ED++ F + +T SD+ +
Sbjct: 539 AVNGGYDVEIKNITDELGVLGIAGPHARKVLQKLTAEDLSDDVFKFLQTKSLKVSDIPVT 598
Query: 237 GF--THTGEPGYCLYIPSEYALHVYQKIMTLGKDYNARDVGMFTQRYMRIEKFIPFWAED 294
++TGE G+ LY E + +Y +M G++ + G + +R+EK W +
Sbjct: 599 AIRISYTGELGWELYHRREDSAALYDIVMDAGQEEGIDNFGTYALNALRLEKAFRAWGSE 658
Query: 295 LNSVTTPFESGSAYRVKLD 313
+N T P E+G Y +KL+
Sbjct: 659 MNCDTNPLEAGLDYFIKLN 677
Score = 99 (39.9 bits), Expect = 5.8e-28, Sum P(2) = 5.8e-28
Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 3 GNSLQGAGGIGRAVAEWMTHGEATQELLSFDVQRFLDLHNNRQYLQQRIREVVGSTYRVG 62
G + AGG+G+ +++W+ HGE +L+ D R+ QY + + RE G VG
Sbjct: 326 GYGIIHAGGVGKYLSDWILHGEPPFDLIELDPNRY-GKWTTTQYTEAKARESYGFNNIVG 384
Query: 63 DPRPE 67
P+ E
Sbjct: 385 YPKEE 389
>UNIPROTKB|F1PKA8 [details] [associations]
symbol:DMGDH "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0006546 "glycine catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0004047
"aminomethyltransferase activity" evidence=IEA] InterPro:IPR006076
InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571 GO:GO:0005737
GO:GO:0016491 GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977
Pfam:PF08669 OMA:REVGKMI GeneTree:ENSGT00530000063120
EMBL:AAEX03002116 EMBL:AAEX03002117 EMBL:AAEX03002118
Ensembl:ENSCAFT00000014548 Uniprot:F1PKA8
Length = 838
Score = 250 (93.1 bits), Expect = 6.9e-28, Sum P(2) = 6.9e-28
Identities = 64/259 (24%), Positives = 123/259 (47%)
Query: 59 YRVGDPRPEMPPGTFFKPKFFDFMEEEYRACFEGVGIIDMSSFSKIKITCSDESLVDWLQ 118
Y+ G P +F + +F+ + EY+ + VG+ID+S F K I D V L
Sbjct: 470 YKPGQDTQYRP--SFRRTNWFEPVGSEYKQVMQKVGVIDLSPFGKFNIKGQDS--VRLLD 525
Query: 119 QLCSNDV-NIPVGGISHTGMQNERGGYENDCILVRETETSYFMVSPTSQQTRVFEWMKNH 177
L +N + + ISH M +G + + +T + +++ + + W++
Sbjct: 526 HLFANVIPKVGFTNISH--MLTPKGRVYAELTVSHQTPGEFLLITGSGSELHDLRWIEEE 583
Query: 178 LPTKHY-ITLSDVTSKYTVINVVGPKAKQLLSELCDEDINLHPFSYKRTDIGYASDVKLM 236
Y + + ++T + V+ + GP A+++L +L ED++ F + +T SD+ +
Sbjct: 584 AVNGGYDVEIKNITDELGVLGIAGPHARKVLQKLTAEDLSDDVFKFLQTKSLKVSDIPVT 643
Query: 237 GF--THTGEPGYCLYIPSEYALHVYQKIMTLGKDYNARDVGMFTQRYMRIEKFIPFWAED 294
++TGE G+ LY E + +Y +M G++ + G + +R+EK W +
Sbjct: 644 AIRISYTGELGWELYHRREDSAALYDIVMDAGQEEGIDNFGTYALNALRLEKAFRAWGSE 703
Query: 295 LNSVTTPFESGSAYRVKLD 313
+N T P E+G Y +KL+
Sbjct: 704 MNCDTNPLEAGLDYFIKLN 722
Score = 99 (39.9 bits), Expect = 6.9e-28, Sum P(2) = 6.9e-28
Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 3 GNSLQGAGGIGRAVAEWMTHGEATQELLSFDVQRFLDLHNNRQYLQQRIREVVGSTYRVG 62
G + AGG+G+ +++W+ HGE +L+ D R+ QY + + RE G VG
Sbjct: 371 GYGIIHAGGVGKYLSDWILHGEPPFDLIELDPNRY-GKWTTTQYTEAKARESYGFNNIVG 429
Query: 63 DPRPE 67
P+ E
Sbjct: 430 YPKEE 434
>UNIPROTKB|F8W6P8 [details] [associations]
symbol:DMGDH "Dimethylglycine dehydrogenase, mitochondrial"
species:9606 "Homo sapiens" [GO:0004047 "aminomethyltransferase
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006546 "glycine catabolic process" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] InterPro:IPR006076
InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571 GO:GO:0005737
GO:GO:0016491 EMBL:AC020937 EMBL:AC008502 GO:GO:0004047
GO:GO:0006546 EMBL:AC016559 HGNC:HGNC:24475 IPI:IPI00178676
ProteinModelPortal:F8W6P8 PRIDE:F8W6P8 Ensembl:ENST00000380311
UCSC:uc011ctf.1 ArrayExpress:F8W6P8 Bgee:F8W6P8 Uniprot:F8W6P8
Length = 573
Score = 244 (91.0 bits), Expect = 7.0e-28, Sum P(2) = 7.0e-28
Identities = 68/280 (24%), Positives = 130/280 (46%)
Query: 47 LQQRIREVVGSTYRVGDPRPEM--PPG--TFFKPKF-----FDFMEEEYRACFEGVGIID 97
L QR+ + G +P PG T ++P F F+ + EY+ + V + D
Sbjct: 273 LYQRLESKCSMGFHAGWEQPHWFYKPGQDTQYRPSFRRTNWFEPVGSEYKQVMQRVAVTD 332
Query: 98 MSSFSKIKITCSDESLVDWLQQLCSNDV-NIPVGGISHTGMQNERGGYENDCILVRETET 156
+S F K I D + L L +N + + ISH M +G + + ++
Sbjct: 333 LSPFGKFNIKGQDS--IRLLDHLFANVIPKVGFTNISH--MLTPKGRVYAELTVSHQSPG 388
Query: 157 SYFMVSPTSQQTRVFEWMKNHLPTKHY-ITLSDVTSKYTVINVVGPKAKQLLSELCDEDI 215
+ +++ + + W++ Y + + ++T + V+ V GP+A+++L +L ED+
Sbjct: 389 EFLLITGSGSELHDLRWIEEEAVKGGYDVEIKNITDELGVLGVAGPQARKVLQKLTSEDL 448
Query: 216 NLHPFSYKRTDIGYASDVKLMGF--THTGEPGYCLYIPSEYALHVYQKIMTLGKDYNARD 273
+ F + +T S++ + ++TGE G+ LY E ++ +Y IM G++ +
Sbjct: 449 SDDVFKFLQTKSLKVSNIPVTAIRISYTGELGWELYHRREDSVALYDAIMNAGQEEGIDN 508
Query: 274 VGMFTQRYMRIEKFIPFWAEDLNSVTTPFESGSAYRVKLD 313
G + +R+EK W ++N T P E+G Y VKL+
Sbjct: 509 FGTYAMNALRLEKAFRAWGLEMNCDTNPLEAGLEYFVKLN 548
Score = 99 (39.9 bits), Expect = 7.0e-28, Sum P(2) = 7.0e-28
Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 3 GNSLQGAGGIGRAVAEWMTHGEATQELLSFDVQRFLDLHNNRQYLQQRIREVVGSTYRVG 62
G + AGG+G+ +++W+ HGE +L+ D R+ QY + + RE G VG
Sbjct: 197 GYGIIHAGGVGKYLSDWILHGEPPFDLIELDPNRY-GKWTTTQYTEAKARESYGFNNIVG 255
Query: 63 DPRPE 67
P+ E
Sbjct: 256 YPKEE 260
>UNIPROTKB|Q8TCC6 [details] [associations]
symbol:DMGDH "Dimethylglycine dehydrogenase, mitochondrial"
species:9606 "Homo sapiens" [GO:0004047 "aminomethyltransferase
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006546 "glycine catabolic process" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] InterPro:IPR006076
InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571 GO:GO:0005737
GO:GO:0016491 EMBL:AC020937 EMBL:AC008502 GO:GO:0004047
GO:GO:0006546 EMBL:AC016559 UniGene:Hs.655653 HGNC:HGNC:24475
HOGENOM:HOG000251716 EMBL:BC022388 IPI:IPI00985114 SMR:Q8TCC6
STRING:Q8TCC6 Ensembl:ENST00000523732 HOVERGEN:HBG103457
Uniprot:Q8TCC6
Length = 613
Score = 244 (91.0 bits), Expect = 9.5e-28, Sum P(2) = 9.5e-28
Identities = 68/280 (24%), Positives = 130/280 (46%)
Query: 47 LQQRIREVVGSTYRVGDPRPEM--PPG--TFFKPKF-----FDFMEEEYRACFEGVGIID 97
L QR+ + G +P PG T ++P F F+ + EY+ + V + D
Sbjct: 313 LYQRLESKCSMGFHAGWEQPHWFYKPGQDTQYRPSFRRTNWFEPVGSEYKQVMQRVAVTD 372
Query: 98 MSSFSKIKITCSDESLVDWLQQLCSNDV-NIPVGGISHTGMQNERGGYENDCILVRETET 156
+S F K I D + L L +N + + ISH M +G + + ++
Sbjct: 373 LSPFGKFNIKGQDS--IRLLDHLFANVIPKVGFTNISH--MLTPKGRVYAELTVSHQSPG 428
Query: 157 SYFMVSPTSQQTRVFEWMKNHLPTKHY-ITLSDVTSKYTVINVVGPKAKQLLSELCDEDI 215
+ +++ + + W++ Y + + ++T + V+ V GP+A+++L +L ED+
Sbjct: 429 EFLLITGSGSELHDLRWIEEEAVKGGYDVEIKNITDELGVLGVAGPQARKVLQKLTSEDL 488
Query: 216 NLHPFSYKRTDIGYASDVKLMGF--THTGEPGYCLYIPSEYALHVYQKIMTLGKDYNARD 273
+ F + +T S++ + ++TGE G+ LY E ++ +Y IM G++ +
Sbjct: 489 SDDVFKFLQTKSLKVSNIPVTAIRISYTGELGWELYHRREDSVALYDAIMNAGQEEGIDN 548
Query: 274 VGMFTQRYMRIEKFIPFWAEDLNSVTTPFESGSAYRVKLD 313
G + +R+EK W ++N T P E+G Y VKL+
Sbjct: 549 FGTYAMNALRLEKAFRAWGLEMNCDTNPLEAGLEYFVKLN 588
Score = 99 (39.9 bits), Expect = 9.5e-28, Sum P(2) = 9.5e-28
Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 3 GNSLQGAGGIGRAVAEWMTHGEATQELLSFDVQRFLDLHNNRQYLQQRIREVVGSTYRVG 62
G + AGG+G+ +++W+ HGE +L+ D R+ QY + + RE G VG
Sbjct: 237 GYGIIHAGGVGKYLSDWILHGEPPFDLIELDPNRY-GKWTTTQYTEAKARESYGFNNIVG 295
Query: 63 DPRPE 67
P+ E
Sbjct: 296 YPKEE 300
>UNIPROTKB|H3BUH3 [details] [associations]
symbol:PDPR "Pyruvate dehydrogenase phosphatase regulatory
subunit, mitochondrial" species:9606 "Homo sapiens" [GO:0004047
"aminomethyltransferase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006546 "glycine catabolic process"
evidence=IEA] InterPro:IPR006222 Pfam:PF01571 GO:GO:0005737
GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669
EMBL:AC009060 EMBL:AC009022 HGNC:HGNC:30264 Ensembl:ENST00000569042
Bgee:H3BUH3 Uniprot:H3BUH3
Length = 197
Score = 307 (113.1 bits), Expect = 2.2e-27, P = 2.2e-27
Identities = 56/123 (45%), Positives = 82/123 (66%)
Query: 194 TVINVVGPKAKQLLSELCDEDINLHPFSY---KRTDIGYASDVKLMGFTHTGEPGYCLYI 250
+ +N++GP+A +LSEL + F K +GYA+ +++M THTGEPG+ LYI
Sbjct: 5 STLNLIGPRAVDVLSELSYAPMTPDHFPSLFCKEMSVGYANGIRVMSMTHTGEPGFMLYI 64
Query: 251 PSEYALHVYQKIMTLGKDYNARDVGMFTQRYMRIEKFIPFWAEDLNSVTTPFESGSAYRV 310
P EYALHVY ++M++G+ Y R+ G + R +RIEKF FW +D+N++TTP E G RV
Sbjct: 65 PIEYALHVYNEVMSVGQKYGIRNAGYYALRSLRIEKFFAFWGQDINNLTTPLECGRESRV 124
Query: 311 KLD 313
KL+
Sbjct: 125 KLE 127
>UNIPROTKB|Q9UI17 [details] [associations]
symbol:DMGDH "Dimethylglycine dehydrogenase, mitochondrial"
species:9606 "Homo sapiens" [GO:0004047 "aminomethyltransferase
activity" evidence=IEA] [GO:0006546 "glycine catabolic process"
evidence=IEA] [GO:0006579 "amino-acid betaine catabolic process"
evidence=IEA] [GO:0006544 "glycine metabolic process" evidence=IMP]
[GO:0019695 "choline metabolic process" evidence=NAS] [GO:0005759
"mitochondrial matrix" evidence=NAS] [GO:0047865 "dimethylglycine
dehydrogenase activity" evidence=IMP] [GO:0009055 "electron carrier
activity" evidence=NAS] InterPro:IPR006076 InterPro:IPR006222
Pfam:PF01266 Pfam:PF01571 UniPathway:UPA00291 GO:GO:0009055
GO:GO:0050660 GO:GO:0005759 GO:GO:0019695 EMBL:AC020937
GO:GO:0006544 GO:GO:0006579 EMBL:AC008502 GO:GO:0004047
GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669 GO:GO:0005542
eggNOG:COG0665 EMBL:AF111858 EMBL:AK314736 IPI:IPI00296196
RefSeq:NP_037523.2 UniGene:Hs.655653 ProteinModelPortal:Q9UI17
SMR:Q9UI17 STRING:Q9UI17 PhosphoSite:Q9UI17 DMDM:296434575
PaxDb:Q9UI17 PRIDE:Q9UI17 DNASU:29958 Ensembl:ENST00000255189
GeneID:29958 KEGG:hsa:29958 UCSC:uc003kfs.3 CTD:29958
GeneCards:GC05M078293 H-InvDB:HIX0200737 HGNC:HGNC:24475
HPA:HPA036442 MIM:605849 MIM:605850 neXtProt:NX_Q9UI17
Orphanet:243343 PharmGKB:PA134947212 HOGENOM:HOG000251716
HOVERGEN:HBG081945 InParanoid:Q9UI17 KO:K00315 OMA:REVGKMI
OrthoDB:EOG466VK7 PhylomeDB:Q9UI17 GenomeRNAi:29958 NextBio:52675
ArrayExpress:Q9UI17 Bgee:Q9UI17 CleanEx:HS_DMGDH
Genevestigator:Q9UI17 GermOnline:ENSG00000132837 GO:GO:0047865
Uniprot:Q9UI17
Length = 866
Score = 244 (91.0 bits), Expect = 3.4e-27, Sum P(2) = 3.4e-27
Identities = 68/280 (24%), Positives = 130/280 (46%)
Query: 47 LQQRIREVVGSTYRVGDPRPEM--PPG--TFFKPKF-----FDFMEEEYRACFEGVGIID 97
L QR+ + G +P PG T ++P F F+ + EY+ + V + D
Sbjct: 474 LYQRLESKCSMGFHAGWEQPHWFYKPGQDTQYRPSFRRTNWFEPVGSEYKQVMQRVAVTD 533
Query: 98 MSSFSKIKITCSDESLVDWLQQLCSNDV-NIPVGGISHTGMQNERGGYENDCILVRETET 156
+S F K I D + L L +N + + ISH M +G + + ++
Sbjct: 534 LSPFGKFNIKGQDS--IRLLDHLFANVIPKVGFTNISH--MLTPKGRVYAELTVSHQSPG 589
Query: 157 SYFMVSPTSQQTRVFEWMKNHLPTKHY-ITLSDVTSKYTVINVVGPKAKQLLSELCDEDI 215
+ +++ + + W++ Y + + ++T + V+ V GP+A+++L +L ED+
Sbjct: 590 EFLLITGSGSELHDLRWIEEEAVKGGYDVEIKNITDELGVLGVAGPQARKVLQKLTSEDL 649
Query: 216 NLHPFSYKRTDIGYASDVKLMGF--THTGEPGYCLYIPSEYALHVYQKIMTLGKDYNARD 273
+ F + +T S++ + ++TGE G+ LY E ++ +Y IM G++ +
Sbjct: 650 SDDVFKFLQTKSLKVSNIPVTAIRISYTGELGWELYHRREDSVALYDAIMNAGQEEGIDN 709
Query: 274 VGMFTQRYMRIEKFIPFWAEDLNSVTTPFESGSAYRVKLD 313
G + +R+EK W ++N T P E+G Y VKL+
Sbjct: 710 FGTYAMNALRLEKAFRAWGLEMNCDTNPLEAGLEYFVKLN 749
Score = 99 (39.9 bits), Expect = 3.4e-27, Sum P(2) = 3.4e-27
Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 3 GNSLQGAGGIGRAVAEWMTHGEATQELLSFDVQRFLDLHNNRQYLQQRIREVVGSTYRVG 62
G + AGG+G+ +++W+ HGE +L+ D R+ QY + + RE G VG
Sbjct: 398 GYGIIHAGGVGKYLSDWILHGEPPFDLIELDPNRY-GKWTTTQYTEAKARESYGFNNIVG 456
Query: 63 DPRPE 67
P+ E
Sbjct: 457 YPKEE 461
>ZFIN|ZDB-GENE-080227-8 [details] [associations]
symbol:dmgdh "dimethylglycine dehydrogenase"
species:7955 "Danio rerio" [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0006546 "glycine
catabolic process" evidence=IEA] [GO:0004047
"aminomethyltransferase activity" evidence=IEA] InterPro:IPR006076
InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571 ZFIN:ZDB-GENE-080227-8
GO:GO:0005737 GO:GO:0016491 GO:GO:0004047 GO:GO:0006546
InterPro:IPR013977 Pfam:PF08669 eggNOG:COG0665 HOGENOM:HOG000251716
HOVERGEN:HBG081945 OrthoDB:EOG466VK7 EMBL:BC155630 IPI:IPI00511660
UniGene:Dr.5571 ProteinModelPortal:A9JRE6 STRING:A9JRE6
Uniprot:A9JRE6
Length = 875
Score = 261 (96.9 bits), Expect = 5.2e-27, Sum P(2) = 5.2e-27
Identities = 70/259 (27%), Positives = 125/259 (48%)
Query: 59 YRVGDPRPEMPPGTFFKPKFFDFMEEEYRACFEGVGIIDMSSFSKIKITCSD-ESLVDWL 117
++ GD P +F + +F + E + VG+ID+S F K+K+T +D E L+D L
Sbjct: 508 HKPGDHTGYRP--SFRRTNWFAPVGRECAQVMQAVGVIDLSPFGKMKVTGADSERLLDRL 565
Query: 118 QQLCSNDVNIPVGGISHTGMQNERGGYENDCILVRETETSYFMVSPTSQQTRVFEWMKNH 177
L + + ISH M RG + + + +++ + + W++
Sbjct: 566 --LANTLPKVGQTNISH--MLTPRGRVYAELTVTHTQPGEFLLITGSGSELHDLRWIERE 621
Query: 178 LPTKHY-ITLSDVTSKYTVINVVGPKAKQLLSELCDEDINLHPFSYK--RTDIGYASDVK 234
Y + +++VT + V+ + GPKA+ +L +L D++ F + RT + V+
Sbjct: 622 AADGGYDVCVTNVTDEIGVLGIAGPKARTILQKLTSADLSESGFRFLQCRTIELAGATVQ 681
Query: 235 LMGFTHTGEPGYCLYIPSEYALHVYQKIMTLGKDYNARDVGMFTQRYMRIEKFIPFWAED 294
+ ++TGE G+ LY+ VYQ +M G+D N D G + +R+EK W +
Sbjct: 682 AIRISYTGELGWELYMDMRNMSAVYQALMEAGRDENIDDFGTYAMNSLRLEKGFRAWGAE 741
Query: 295 LNSVTTPFESGSAYRVKLD 313
+N T P E+G Y +KL+
Sbjct: 742 MNCDTNPLEAGLDYFIKLN 760
Score = 80 (33.2 bits), Expect = 5.2e-27, Sum P(2) = 5.2e-27
Identities = 19/65 (29%), Positives = 33/65 (50%)
Query: 3 GNSLQGAGGIGRAVAEWMTHGEATQELLSFDVQRFLDLHNNRQYLQQRIREVVGSTYRVG 62
G + +GG+GR +++W+ +GE +L+ D R+ Y+ + RE G VG
Sbjct: 409 GYGIIHSGGVGRFLSDWIINGEPPYDLIECDPNRY-GHWTTVPYVCAKARESYGFNNVVG 467
Query: 63 DPRPE 67
P+ E
Sbjct: 468 FPKEE 472
>UNIPROTKB|E1BSV1 [details] [associations]
symbol:DMGDH "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004047 "aminomethyltransferase activity" evidence=IEA]
[GO:0006546 "glycine catabolic process" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0047865 "dimethylglycine
dehydrogenase activity" evidence=IEA] InterPro:IPR006076
InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571 GO:GO:0005739
GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669
OMA:REVGKMI GO:GO:0047865 GeneTree:ENSGT00530000063120
EMBL:AADN02046136 EMBL:AADN02046137 EMBL:AADN02046138
EMBL:AADN02046139 EMBL:AADN02046140 EMBL:AADN02046141
EMBL:AADN02046142 IPI:IPI00588243 ProteinModelPortal:E1BSV1
Ensembl:ENSGALT00000007151 Uniprot:E1BSV1
Length = 862
Score = 257 (95.5 bits), Expect = 5.6e-26, Sum P(2) = 5.6e-26
Identities = 69/258 (26%), Positives = 124/258 (48%)
Query: 59 YRVGDPRPEMPPGTFFKPKFFDFMEEEYRACFEGVGIIDMSSFSKIKITCSDESLVDWLQ 118
Y+ GD P +F + +FD + EY+ E G+ID+S F K K+ +D V L
Sbjct: 493 YKPGDETGYKP--SFRRTNWFDPVGREYKQVMERAGVIDLSPFGKFKVKGTDS--VKLLD 548
Query: 119 QLCSNDVNIPVGGISHTGMQNERGGYENDCILVRETETSYFMVSPTSQQTRVFEWMKNHL 178
L +N N VG + + M +G + + + + +V+ + + W++ +
Sbjct: 549 HLFANVAN-KVGSTNISHMLTPKGKVYAELTVSQLYPGEFMLVTGSGSELHDLRWIEEEV 607
Query: 179 PTKHY-ITLSDVTSKYTVINVVGPKAKQLLSELCDEDINLHPFSYKRTDIGYASDVKLMG 237
Y + + ++T + V+ V GP A+Q+L L ED++ F + ++ SD+ +
Sbjct: 608 VRGGYKVEIENMTDEMGVLGVAGPYARQVLQRLTAEDLSDGSFKFLQSRHLKLSDIAVTA 667
Query: 238 F--THTGEPGYCLYIPSEYALHVYQKIMTLGKDYNARDVGMFTQRYMRIEKFIPFWAEDL 295
++TGE G+ LY E ++ +Y IM G+ + G + +R+EK W ++
Sbjct: 668 IRISYTGELGWELYHRKEDSVALYNAIMDAGQKEGIDNFGTYALNALRLEKGFRAWGAEM 727
Query: 296 NSVTTPFESGSAYRVKLD 313
N T P E+G Y VKL+
Sbjct: 728 NCDTNPLEAGLEYFVKLN 745
Score = 74 (31.1 bits), Expect = 5.6e-26, Sum P(2) = 5.6e-26
Identities = 17/59 (28%), Positives = 29/59 (49%)
Query: 9 AGGIGRAVAEWMTHGEATQELLSFDVQRFLDLHNNRQYLQQRIREVVGSTYRVGDPRPE 67
AGGIG+ +++W+ GE +L+ D R+ +Y + RE G + P+ E
Sbjct: 400 AGGIGKYLSDWILEGEPPFDLIELDPNRY-GKWTTTEYTAAKARESYGFNNIIIYPKEE 457
>UNIPROTKB|F1MDJ6 [details] [associations]
symbol:DMGDH "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0047865 "dimethylglycine dehydrogenase activity"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0006546
"glycine catabolic process" evidence=IEA] [GO:0004047
"aminomethyltransferase activity" evidence=IEA] InterPro:IPR006076
InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571 GO:GO:0005739
GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669
OMA:REVGKMI GO:GO:0047865 GeneTree:ENSGT00530000063120
EMBL:DAAA02027819 IPI:IPI00715285 Ensembl:ENSBTAT00000036611
Uniprot:F1MDJ6
Length = 866
Score = 243 (90.6 bits), Expect = 6.1e-26, Sum P(2) = 6.1e-26
Identities = 63/256 (24%), Positives = 123/256 (48%)
Query: 65 RPEMPPG---TFFKPKFFDFMEEEYRACFEGVGIIDMSSFSKIKITCSDESLVDWLQQLC 121
+P PG +F + +F+ + EY+ + VG+ID+S F K I D + L L
Sbjct: 498 KPGQDPGYRPSFHRTNWFEPVGSEYQQVMQRVGVIDLSPFGKFNIKGQDS--IRLLDHLF 555
Query: 122 SNDV-NIPVGGISHTGMQNERGGYENDCILVRETETSYFMVSPTSQQTRVFEWMKNHLPT 180
+N + + ISH M +G + + ++ + +V+ + + W++
Sbjct: 556 ANVIPKVGFTNISH--MLTPKGRVYAELTVSHQSPGEFLLVTGSGSELHDLRWIEEEAIK 613
Query: 181 KHY-ITLSDVTSKYTVINVVGPKAKQLLSELCDEDINLHPFSYKRTDIGYASDVKLMGF- 238
Y + + ++T + V+ V GP ++++L +L ED++ + F + +T S++ +
Sbjct: 614 GGYDVEIKNITDELGVLGVAGPYSRKVLQKLTSEDLSDNVFKFLQTKSLKVSNIPVTAIR 673
Query: 239 -THTGEPGYCLYIPSEYALHVYQKIMTLGKDYNARDVGMFTQRYMRIEKFIPFWAEDLNS 297
++TGE G+ LY E + +Y IM G++ + G + +R+EK W ++N
Sbjct: 674 ISYTGELGWELYHRREDSAALYDAIMNAGQEEGIDNFGTYAMNALRLEKAFRAWGSEMNC 733
Query: 298 VTTPFESGSAYRVKLD 313
T P E+G VKL+
Sbjct: 734 DTNPLEAGLESFVKLN 749
Score = 88 (36.0 bits), Expect = 6.1e-26, Sum P(2) = 6.1e-26
Identities = 19/65 (29%), Positives = 33/65 (50%)
Query: 3 GNSLQGAGGIGRAVAEWMTHGEATQELLSFDVQRFLDLHNNRQYLQQRIREVVGSTYRVG 62
G + AGG+G+ +++W+ H E +L+ D R+ +Y + + RE G VG
Sbjct: 398 GYGIIHAGGVGKYLSDWILHREPPFDLIELDPNRY-GKWTTAEYTEAKARESYGFNNIVG 456
Query: 63 DPRPE 67
P+ E
Sbjct: 457 YPKEE 461
>TIGR_CMR|BA_4449 [details] [associations]
symbol:BA_4449 "glycine cleavage system T protein"
species:198094 "Bacillus anthracis str. Ames" [GO:0004047
"aminomethyltransferase activity" evidence=ISS] [GO:0019464
"glycine decarboxylation via glycine cleavage system" evidence=ISS]
InterPro:IPR006222 InterPro:IPR006223 InterPro:IPR022903
Pfam:PF01571 PIRSF:PIRSF006487 GO:GO:0005737 GO:GO:0008483
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0004047
GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669 KO:K00605
PANTHER:PTHR13847:SF5 eggNOG:COG0404 TIGRFAMs:TIGR00528
RefSeq:NP_846677.1 RefSeq:YP_021093.1 RefSeq:YP_030380.1
ProteinModelPortal:Q81M06 SMR:Q81M06 IntAct:Q81M06 DNASU:1087845
EnsemblBacteria:EBBACT00000011986 EnsemblBacteria:EBBACT00000017692
EnsemblBacteria:EBBACT00000020316 GeneID:1087845 GeneID:2818765
GeneID:2849651 KEGG:ban:BA_4449 KEGG:bar:GBAA_4449 KEGG:bat:BAS4131
HOGENOM:HOG000239381 OMA:LGARDVC ProtClustDB:PRK00389
BioCyc:BANT260799:GJAJ-4187-MONOMER
BioCyc:BANT261594:GJ7F-4328-MONOMER HAMAP:MF_00259 Uniprot:Q81M06
Length = 366
Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 68/238 (28%), Positives = 128/238 (53%)
Query: 76 PKFFDFMEEEYRACFEGVGIIDMSSFSKIKITCSDESLVDWLQQLCSNDVN-IPVGGISH 134
P F ++EE+ A G+ D+S ++++ D SL +LQ++ +NDV+ + VGG +
Sbjct: 29 PVQFSSIKEEHEAVRTAAGLFDVSHMGEVEVKGVD-SLA-FLQRVVTNDVSTLKVGGAQY 86
Query: 135 TGMQNERGGYENDCILVRETETSYFMVSPTSQQTRVFEWMKNHLPTKHYITLSDVTSKYT 194
T M E GG +D ++ + E Y +V S + +EW+ +H+ T+ +V+S+
Sbjct: 87 TAMCYENGGTVDDLLIYKRGEEDYLLVINASNIEKDYEWLASHVIGD--ATVVNVSSEVA 144
Query: 195 VINVVGPKAKQLLSELCDEDINLHPFSYKRTDIGYASDVKLMGFT-HTGEPGYCLYIPSE 253
+ + GPKA+ +L ++ ED+ F + DI L+ T +TGE G+ +Y SE
Sbjct: 145 QLAIQGPKAEGILQKVVSEDLKEIKFFKFKNDILVDGIPALVSRTGYTGEDGFEIYCKSE 204
Query: 254 YALHVYQKIMTLGKDYNARDVGMFTQRYMRIEKFIPFWAEDLNSVTTPFESGSAYRVK 311
A +++K++ +G + + G+ + +R E +P + ++L+ TP E+G + VK
Sbjct: 205 DAAKLWEKLLEVGAEEGLKACGLGARDTLRFEATLPLYGQELSKDITPIEAGIGFAVK 262
>UNIPROTKB|B7ZAR9 [details] [associations]
symbol:PDPR "cDNA, FLJ79283, highly similar to Homo sapiens
pyruvate dehydrogenase phosphatase regulatory subunit (PDPR), mRNA"
species:9606 "Homo sapiens" [GO:0004047 "aminomethyltransferase
activity" evidence=IEA] [GO:0006546 "glycine catabolic process"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR006222 Pfam:PF01571 GO:GO:0005739 GO:GO:0004047
GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669 EMBL:AC009060
EMBL:AC009022 UniGene:Hs.461183 HGNC:HGNC:30264 IPI:IPI00872462
HOVERGEN:HBG106508 EMBL:AK316384 SMR:B7ZAR9 STRING:B7ZAR9
Ensembl:ENST00000567046 Uniprot:B7ZAR9
Length = 237
Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 47/91 (51%), Positives = 66/91 (72%)
Query: 223 KRTDIGYASDVKLMGFTHTGEPGYCLYIPSEYALHVYQKIMTLGKDYNARDVGMFTQRYM 282
K +GYA+ +++M THTGEPG+ LYIP EYALHVY ++M++G+ Y R+ G + R +
Sbjct: 12 KEMSVGYANGIRVMSMTHTGEPGFMLYIPIEYALHVYNEVMSVGQKYGIRNAGYYALRSL 71
Query: 283 RIEKFIPFWAEDLNSVTTPFESGSAYRVKLD 313
RIEKF FW +D+N++TTP E G RVKL+
Sbjct: 72 RIEKFFAFWGQDINNLTTPLECGRESRVKLE 102
>UNIPROTKB|H3BV59 [details] [associations]
symbol:PDPR "Pyruvate dehydrogenase phosphatase regulatory
subunit, mitochondrial" species:9606 "Homo sapiens" [GO:0004047
"aminomethyltransferase activity" evidence=IEA] [GO:0006546
"glycine catabolic process" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] InterPro:IPR006222 Pfam:PF01571
GO:GO:0005739 GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977
Pfam:PF08669 EMBL:AC009060 EMBL:AC009022 HGNC:HGNC:30264
Ensembl:ENST00000563930 Bgee:H3BV59 Uniprot:H3BV59
Length = 149
Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 47/91 (51%), Positives = 66/91 (72%)
Query: 223 KRTDIGYASDVKLMGFTHTGEPGYCLYIPSEYALHVYQKIMTLGKDYNARDVGMFTQRYM 282
K +GYA+ +++M THTGEPG+ LYIP EYALHVY ++M++G+ Y R+ G + R +
Sbjct: 12 KEMSVGYANGIRVMSMTHTGEPGFMLYIPIEYALHVYNEVMSVGQKYGIRNAGYYALRSL 71
Query: 283 RIEKFIPFWAEDLNSVTTPFESGSAYRVKLD 313
RIEKF FW +D+N++TTP E G RVKL+
Sbjct: 72 RIEKFFAFWGQDINNLTTPLECGRESRVKLE 102
>UNIPROTKB|B3KSE1 [details] [associations]
symbol:PDPR "Pyruvate dehydrogenase phosphatase regulatory
subunit, mitochondrial" species:9606 "Homo sapiens" [GO:0004047
"aminomethyltransferase activity" evidence=IEA] [GO:0006546
"glycine catabolic process" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] InterPro:IPR006222 Pfam:PF01571
GO:GO:0005739 GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977
Pfam:PF08669 EMBL:AC009060 EMBL:AC009022 UniGene:Hs.461183
HGNC:HGNC:30264 EMBL:AK093391 IPI:IPI00643433 SMR:B3KSE1
STRING:B3KSE1 Ensembl:ENST00000542659 UCSC:uc002eyh.2
HOVERGEN:HBG106508 Uniprot:B3KSE1
Length = 224
Score = 276 (102.2 bits), Expect = 4.2e-24, P = 4.2e-24
Identities = 46/87 (52%), Positives = 65/87 (74%)
Query: 227 IGYASDVKLMGFTHTGEPGYCLYIPSEYALHVYQKIMTLGKDYNARDVGMFTQRYMRIEK 286
+GYA+ +++M THTGEPG+ LYIP EYALHVY ++M++G+ Y R+ G + R +RIEK
Sbjct: 3 VGYANGIRVMSMTHTGEPGFMLYIPIEYALHVYNEVMSVGQKYGIRNAGYYALRSLRIEK 62
Query: 287 FIPFWAEDLNSVTTPFESGSAYRVKLD 313
F FW +D+N++TTP E G RVKL+
Sbjct: 63 FFAFWGQDINNLTTPLECGRESRVKLE 89
>UNIPROTKB|H3BU60 [details] [associations]
symbol:PDPR "Pyruvate dehydrogenase phosphatase regulatory
subunit, mitochondrial" species:9606 "Homo sapiens" [GO:0004047
"aminomethyltransferase activity" evidence=IEA] [GO:0006546
"glycine catabolic process" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] InterPro:IPR006222 Pfam:PF01571
GO:GO:0005739 GO:GO:0004047 GO:GO:0006546 EMBL:AC009060
EMBL:AC009022 HGNC:HGNC:30264 Ensembl:ENST00000567896 Bgee:H3BU60
Uniprot:H3BU60
Length = 100
Score = 274 (101.5 bits), Expect = 6.8e-24, P = 6.8e-24
Identities = 46/89 (51%), Positives = 64/89 (71%)
Query: 223 KRTDIGYASDVKLMGFTHTGEPGYCLYIPSEYALHVYQKIMTLGKDYNARDVGMFTQRYM 282
K +GYA+ +++M THTGEPG+ LYIP EYALHVY ++M++G+ Y R+ G + R +
Sbjct: 12 KEMSVGYANGIRVMSMTHTGEPGFMLYIPIEYALHVYNEVMSVGQKYGIRNAGYYALRSL 71
Query: 283 RIEKFIPFWAEDLNSVTTPFESGSAYRVK 311
RIEKF FW +D+N++TTP E G RVK
Sbjct: 72 RIEKFFAFWGQDINNLTTPLECGRESRVK 100
>TIGR_CMR|SPO_0544 [details] [associations]
symbol:SPO_0544 "aminomethyl transferase family protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004047
"aminomethyltransferase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] [GO:0050660 "flavin adenine
dinucleotide binding" evidence=ISS] InterPro:IPR006076
InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571 GO:GO:0005737
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0016491 GO:GO:0004047
GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669 HOGENOM:HOG000251716
KO:K00315 ProtClustDB:CLSK863205 RefSeq:YP_165805.1
ProteinModelPortal:Q5LW00 GeneID:3195841 KEGG:sil:SPO0544
PATRIC:23374353 OMA:GHIAPAD Uniprot:Q5LW00
Length = 811
Score = 227 (85.0 bits), Expect = 8.8e-24, Sum P(2) = 8.8e-24
Identities = 66/247 (26%), Positives = 119/247 (48%)
Query: 62 GDPRPEMPPGTFFKPKFFDFMEEEYRACFEGVGIIDMSSFSKIKITCSDESLVDWLQQLC 121
G+ PE TF + F+ + E RA VG+ID +SF+K ++ S + +L +
Sbjct: 453 GNRTPETL--TFRRSNAFEAIGAECRAIRNAVGLIDFTSFAKWEV--SGAGAMAFLDRAL 508
Query: 122 SNDVNIPVGGISHTGMQNERGGYENDCILVRETETSYFMVSPTSQQTRVFEWMKNHLPTK 181
+N + G ++ +E G + + + R E +++ P + +++ L
Sbjct: 509 ANAMPKRDGRVTLAHALDENGRFCAEFTVARLAEDRFYICGPAFSEVHDDHVLRSRLRPA 568
Query: 182 HYITLSDVTSKYTVINVVGPKAKQLLSELCD---EDINLHPFSYKRTDIGYASDVKLMGF 238
TL++V+ + V GPK+++LLS + D E+ + F ++G+A+DV+LM
Sbjct: 569 DAATLTNVSMGWGCFTVAGPKSRELLSRIVDAPLENDSFKWFDLHEGEVGWATDVRLMRV 628
Query: 239 THTGEPGYCLYIPSEYALHVYQKIMTLGKDYNARDVGMFTQRYMRIEKFIPFWAEDLNSV 298
+ GE G+ L+ P + H+ ++ G D R VGM +RIEK A++L +
Sbjct: 629 NYCGELGWELHHPIAFQHHILDQLEQAGADLGLRHVGMRALDSLRIEKSYRAVAQELTTQ 688
Query: 299 TTPFESG 305
T E G
Sbjct: 689 NTLHELG 695
Score = 96 (38.9 bits), Expect = 8.8e-24, Sum P(2) = 8.8e-24
Identities = 20/60 (33%), Positives = 33/60 (55%)
Query: 10 GGIGRAVAEWMTHGEATQELLSFDVQRFLDLHNNRQYLQQRIREVVGSTYRVGDPRPEMP 69
GG+GR +AEW+T G T ++ D +RF + H + + + + E G + + P EMP
Sbjct: 358 GGVGRYLAEWITEGAPTIDMWPVDPRRF-NGHAGKNHTRLKNEETYGHIFDIHYPNLEMP 416
>UNIPROTKB|E2R5G7 [details] [associations]
symbol:SARDH "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0006546
"glycine catabolic process" evidence=IEA] [GO:0004047
"aminomethyltransferase activity" evidence=IEA] InterPro:IPR006076
InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571 GO:GO:0005739
GO:GO:0016491 GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977
Pfam:PF08669 GeneTree:ENSGT00530000063120 CTD:1757 KO:K00314
OMA:PHHDVIK EMBL:AAEX03006776 RefSeq:XP_548398.2
Ensembl:ENSCAFT00000031482 GeneID:491277 KEGG:cfa:491277
Uniprot:E2R5G7
Length = 914
Score = 216 (81.1 bits), Expect = 3.7e-21, Sum P(2) = 3.7e-21
Identities = 71/260 (27%), Positives = 114/260 (43%)
Query: 72 TFFKPKFFDFMEEEYRACFEGVGIIDMSSFSKIKITCSD-ESLVDWLQQLCSNDVNIPVG 130
TF P D +++E AC + +MS F K + D DWL S DV+ P G
Sbjct: 543 TFDFPPHHDVIKKECLACRGAAAVFNMSYFGKFYLVGLDARKAADWL---FSADVSRPPG 599
Query: 131 GISHTGMQNERGGYENDCILVR-ETETSYFMVSPTSQQTRVF----------EWMKNHLP 179
+T M N RGG E+D + R + ++P + + W +H+
Sbjct: 600 STVYTCMLNHRGGTESDLTVSRLDPSPQASALAPAFEGDGYYLAVGGAVAQHNW--SHIS 657
Query: 180 T-----KHYITLSDVTSKYTVINVVGPKAKQLLSELCDEDINLHPFSYKRTDIGYASD-- 232
T K L D + +I++ GP ++ +L E+ D D++ F + + A+
Sbjct: 658 TVLQDQKFRCQLIDGSEDLGMISIQGPASRTILQEVLDADLSNEAFPFSTHKLVRAAGHL 717
Query: 233 VKLMGFTHTGEPGYCLYIPSEYALHVYQKIMTLGKDYNARDVGMFTQRYMRIEKFIPFWA 292
V+ M + GE G+ L++P + VYQ +MT G + + G + IEK W
Sbjct: 718 VRAMRLSFVGELGWELHVPRSACVPVYQAVMTAGTKHGLVNAGYRAIDSLSIEKGYRHWH 777
Query: 293 EDLNSVTTPFESGSAYRVKL 312
DL +P E+G A+ KL
Sbjct: 778 ADLRPDDSPLEAGLAFTCKL 797
Score = 95 (38.5 bits), Expect = 3.7e-21, Sum P(2) = 3.7e-21
Identities = 19/67 (28%), Positives = 36/67 (53%)
Query: 2 NGNSLQGAGGIGRAVAEWMTHGEATQELLSFDVQRFLDL-HNNRQYLQQRIREVVGSTYR 60
N + GG G+ +A W+ G +++ S+D++RF L ++R+++++R E Y
Sbjct: 406 NSAGMMLGGGCGQELAHWIIQGRPEKDMYSYDIRRFHHLLTDHRRWIRERSHESYAKNYS 465
Query: 61 VGDPRPE 67
V P E
Sbjct: 466 VVFPHDE 472
>UNIPROTKB|E1BB28 [details] [associations]
symbol:SARDH "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0006546 "glycine
catabolic process" evidence=IEA] [GO:0004047
"aminomethyltransferase activity" evidence=IEA] InterPro:IPR006076
InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571 GO:GO:0005739
GO:GO:0016491 GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977
Pfam:PF08669 GeneTree:ENSGT00530000063120 CTD:1757 KO:K00314
OMA:PHHDVIK EMBL:DAAA02032349 EMBL:DAAA02032350 IPI:IPI00707303
RefSeq:NP_001179970.1 UniGene:Bt.45831 ProteinModelPortal:E1BB28
Ensembl:ENSBTAT00000005925 GeneID:614603 KEGG:bta:614603
NextBio:20899187 Uniprot:E1BB28
Length = 919
Score = 215 (80.7 bits), Expect = 4.1e-21, Sum P(2) = 4.1e-21
Identities = 74/259 (28%), Positives = 113/259 (43%)
Query: 72 TFFKPKFFDFMEEEYRACFEGVGIIDMSSFSKIKITCSD-ESLVDWLQQLCSNDVNIPVG 130
TF P D +++E AC + DMS F K + D DWL S DV+ P G
Sbjct: 548 TFSFPPHHDVIKKECLACRGAAAVFDMSYFGKFFLVGPDARKAADWL---FSADVSRPPG 604
Query: 131 GISHTGMQNERGGYENDCILVR--------------ETETSYFMVSPTSQQTRVFEWMKN 176
+T M N RGG E+D + R E + Y V + Q + ++
Sbjct: 605 STVYTCMLNHRGGTESDLTVSRLAPGPQASPLAPAFEGDGYYLAVGGAAAQHN-WSHIRT 663
Query: 177 HLPTKHY-ITLSDVTSKYTVINVVGPKAKQLLSELCDEDIN--LHPFSYKRTDIGYASDV 233
L + + L D + +I+V GP ++ +L EL + D++ PFS + V
Sbjct: 664 VLQDRKFRCQLIDSSEDLGLISVQGPASRAVLQELLEADLSDDAFPFSTHKLVRAAGHLV 723
Query: 234 KLMGFTHTGEPGYCLYIPSEYALHVYQKIMTLGKDYNARDVGMFTQRYMRIEKFIPFWAE 293
+ + + GE G+ L+ P L VYQ +MT G + + G + IEK W
Sbjct: 724 RAVRLSFVGELGWELHAPRPSCLPVYQALMTAGAKHGLVNAGYRAIDSLSIEKGYRHWHA 783
Query: 294 DLNSVTTPFESGSAYRVKL 312
DL + +P E+G A+ KL
Sbjct: 784 DLRADDSPLEAGLAFTCKL 802
Score = 96 (38.9 bits), Expect = 4.1e-21, Sum P(2) = 4.1e-21
Identities = 19/67 (28%), Positives = 35/67 (52%)
Query: 2 NGNSLQGAGGIGRAVAEWMTHGEATQELLSFDVQRF-LDLHNNRQYLQQRIREVVGSTYR 60
N + GG G+ +A W+ HG +++ S+D++RF L + +++++R E Y
Sbjct: 411 NSAGMMLGGGCGQQLAYWIVHGRPEKDMHSYDIRRFHRSLTGHGRWIRERSHEAYAKNYS 470
Query: 61 VGDPRPE 67
V P E
Sbjct: 471 VVFPHDE 477
>UNIPROTKB|B4DPI2 [details] [associations]
symbol:SARDH "Sarcosine dehydrogenase, mitochondrial"
species:9606 "Homo sapiens" [GO:0004047 "aminomethyltransferase
activity" evidence=IEA] [GO:0006546 "glycine catabolic process"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR006076
InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571 GO:GO:0050660
GO:GO:0005759 GO:GO:0016491 GO:GO:0004047 GO:GO:0006546
InterPro:IPR013977 Pfam:PF08669 EMBL:AL365494 EMBL:AL590710
UniGene:Hs.198003 HGNC:HGNC:10536 HOVERGEN:HBG002326 EMBL:AK298348
EMBL:AK316494 IPI:IPI01011174 SMR:B4DPI2 STRING:B4DPI2
Ensembl:ENST00000422262 Uniprot:B4DPI2
Length = 750
Score = 212 (79.7 bits), Expect = 2.2e-20, Sum P(2) = 2.2e-20
Identities = 71/258 (27%), Positives = 113/258 (43%)
Query: 72 TFFKPKFFDFMEEEYRACFEGVGIIDMSSFSKIKITCSD-ESLVDWLQQLCSNDVNIPVG 130
TF P D +++E AC + DMS F K + D DWL S DV+ P G
Sbjct: 379 TFAFPPHHDTIKKECLACRGAAAVFDMSYFGKFYLVGLDARKAADWL---FSADVSRPPG 435
Query: 131 GISHTGMQNERGGYENDCILVRETETSYFM-VSPTSQQTRVFEWMK--------NHLPT- 180
+T M N RGG E+D + R + ++P + + M +H+ T
Sbjct: 436 STVYTCMLNHRGGTESDLTVSRLAPSHQASPLAPAFEGDGYYLAMGGAVAQHNWSHITTV 495
Query: 181 ----KHYITLSDVTSKYTVINVVGPKAKQLLSELCDEDINLHPFSYKRTDIGYASD--VK 234
K L D + +I++ GP ++ +L E+ D D++ F + + A+ V+
Sbjct: 496 LQDQKSQCQLIDSSEDLGMISIQGPASRAILQEVLDADLSNEAFPFSTHKLLRAAGHLVR 555
Query: 235 LMGFTHTGEPGYCLYIPSEYALHVYQKIMTLGKDYNARDVGMFTQRYMRIEKFIPFWAED 294
M + GE G+ L+IP + VY+ +M G + + G + IEK W D
Sbjct: 556 AMRLSFVGELGWELHIPKASCVPVYRAVMAAGAKHGLINAGYRAIDSLSIEKGYRHWHAD 615
Query: 295 LNSVTTPFESGSAYRVKL 312
L +P E+G A+ KL
Sbjct: 616 LRPDDSPLEAGLAFTCKL 633
Score = 91 (37.1 bits), Expect = 2.2e-20, Sum P(2) = 2.2e-20
Identities = 18/67 (26%), Positives = 35/67 (52%)
Query: 2 NGNSLQGAGGIGRAVAEWMTHGEATQELLSFDVQRFL-DLHNNRQYLQQRIREVVGSTYR 60
N + GG G+ +A W+ HG +++ +D++RF L ++ +++++R E Y
Sbjct: 242 NSAGMMLGGGCGQELAHWIIHGRPEKDMHGYDIRRFHHSLTDHPRWIRERSHESYAKNYS 301
Query: 61 VGDPRPE 67
V P E
Sbjct: 302 VVFPHDE 308
>UNIPROTKB|Q9UL12 [details] [associations]
symbol:SARDH "Sarcosine dehydrogenase, mitochondrial"
species:9606 "Homo sapiens" [GO:0004047 "aminomethyltransferase
activity" evidence=IEA] [GO:0006546 "glycine catabolic process"
evidence=IEA] [GO:0008480 "sarcosine dehydrogenase activity"
evidence=IEA] [GO:0005759 "mitochondrial matrix" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=ISS] UniPathway:UPA00292
InterPro:IPR006076 InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571
GO:GO:0005739 GO:GO:0050660 GO:GO:0005759 EMBL:CH471090
GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669
eggNOG:COG0665 EMBL:AL365494 HOGENOM:HOG000251716 EMBL:AF095735
EMBL:AF162428 EMBL:AF140745 EMBL:AF140726 EMBL:AF140727
EMBL:AF140728 EMBL:AF140729 EMBL:AF140730 EMBL:AF140731
EMBL:AF140732 EMBL:AF140733 EMBL:AF140734 EMBL:AF140735
EMBL:AF140736 EMBL:AF140737 EMBL:AF140738 EMBL:AF140739
EMBL:AF140740 EMBL:AF140741 EMBL:AF140742 EMBL:AF140743
EMBL:AF140744 EMBL:AL590710 EMBL:BC136363 EMBL:BC136364
EMBL:BC144035 EMBL:AF129265 IPI:IPI00034308 RefSeq:NP_001128179.1
RefSeq:NP_009032.2 UniGene:Hs.198003 ProteinModelPortal:Q9UL12
SMR:Q9UL12 STRING:Q9UL12 PhosphoSite:Q9UL12 DMDM:52000845
PaxDb:Q9UL12 PRIDE:Q9UL12 Ensembl:ENST00000371872
Ensembl:ENST00000439388 GeneID:1757 KEGG:hsa:1757 UCSC:uc004ceo.3
CTD:1757 GeneCards:GC09M136528 H-InvDB:HIX0079029 HGNC:HGNC:10536
MIM:268900 MIM:604455 neXtProt:NX_Q9UL12 Orphanet:3129
PharmGKB:PA34944 HOVERGEN:HBG002326 InParanoid:Q9UL12 KO:K00314
OMA:PHHDVIK OrthoDB:EOG4XKV66 PhylomeDB:Q9UL12 GenomeRNAi:1757
NextBio:7153 ArrayExpress:Q9UL12 Bgee:Q9UL12 CleanEx:HS_SARDH
Genevestigator:Q9UL12 GermOnline:ENSG00000123453 GO:GO:0008480
Uniprot:Q9UL12
Length = 918
Score = 212 (79.7 bits), Expect = 4.0e-20, Sum P(2) = 4.0e-20
Identities = 71/258 (27%), Positives = 113/258 (43%)
Query: 72 TFFKPKFFDFMEEEYRACFEGVGIIDMSSFSKIKITCSD-ESLVDWLQQLCSNDVNIPVG 130
TF P D +++E AC + DMS F K + D DWL S DV+ P G
Sbjct: 547 TFAFPPHHDTIKKECLACRGAAAVFDMSYFGKFYLVGLDARKAADWL---FSADVSRPPG 603
Query: 131 GISHTGMQNERGGYENDCILVRETETSYFM-VSPTSQQTRVFEWMK--------NHLPT- 180
+T M N RGG E+D + R + ++P + + M +H+ T
Sbjct: 604 STVYTCMLNHRGGTESDLTVSRLAPSHQASPLAPAFEGDGYYLAMGGAVAQHNWSHITTV 663
Query: 181 ----KHYITLSDVTSKYTVINVVGPKAKQLLSELCDEDINLHPFSYKRTDIGYASD--VK 234
K L D + +I++ GP ++ +L E+ D D++ F + + A+ V+
Sbjct: 664 LQDQKSQCQLIDSSEDLGMISIQGPASRAILQEVLDADLSNEAFPFSTHKLLRAAGHLVR 723
Query: 235 LMGFTHTGEPGYCLYIPSEYALHVYQKIMTLGKDYNARDVGMFTQRYMRIEKFIPFWAED 294
M + GE G+ L+IP + VY+ +M G + + G + IEK W D
Sbjct: 724 AMRLSFVGELGWELHIPKASCVPVYRAVMAAGAKHGLINAGYRAIDSLSIEKGYRHWHAD 783
Query: 295 LNSVTTPFESGSAYRVKL 312
L +P E+G A+ KL
Sbjct: 784 LRPDDSPLEAGLAFTCKL 801
Score = 91 (37.1 bits), Expect = 4.0e-20, Sum P(2) = 4.0e-20
Identities = 18/67 (26%), Positives = 35/67 (52%)
Query: 2 NGNSLQGAGGIGRAVAEWMTHGEATQELLSFDVQRFL-DLHNNRQYLQQRIREVVGSTYR 60
N + GG G+ +A W+ HG +++ +D++RF L ++ +++++R E Y
Sbjct: 410 NSAGMMLGGGCGQELAHWIIHGRPEKDMHGYDIRRFHHSLTDHPRWIRERSHESYAKNYS 469
Query: 61 VGDPRPE 67
V P E
Sbjct: 470 VVFPHDE 476
>TIGR_CMR|SPO_1592 [details] [associations]
symbol:SPO_1592 "aminomethyl transferase family protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004047
"aminomethyltransferase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR006076
InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571 GO:GO:0005737
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0016491 GO:GO:0004047
GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669 HOGENOM:HOG000251716
ProtClustDB:CLSK863205 RefSeq:YP_166833.1 ProteinModelPortal:Q5LT22
GeneID:3193241 KEGG:sil:SPO1592 PATRIC:23376507 OMA:AVWIDEC
Uniprot:Q5LT22
Length = 818
Score = 223 (83.6 bits), Expect = 6.2e-20, Sum P(2) = 6.2e-20
Identities = 61/229 (26%), Positives = 113/229 (49%)
Query: 73 FFKPKFFDFMEEEYRACFEGVGIIDMSSFSKIKITCSDESLVDWLQQLCSNDVNIPVGGI 132
F + D + E A GI+D+S+F+K++++ D + L +L +N + GGI
Sbjct: 467 FGRTPVHDMVATECAAVRSAAGIMDISAFTKVEVSGPDAGAL--LDRLTANRLPQKPGGI 524
Query: 133 SHTGMQNERGGYENDCILVRETETSYFMVSPTSQQTRVFEWMKNHLPTKHYITLSDVTSK 192
+ T M N RG E + +V+ E +++V + R+ + + H T IT+ ++++
Sbjct: 525 ALTHMLNRRGRIELETTVVKLDEDRFYLVCAAFFEQRLLDHLAAHRGTAD-ITVRNLSTD 583
Query: 193 YTVINVVGPKAKQLLSELCDEDINLHPFSYKRTD-IGYAS-DVKLMGFTHTGEPGYCLYI 250
+ + + GP A+ +L+ + D++ F + I A + + ++ GE G+ L+I
Sbjct: 584 WAALALNGPHARDILAACTEADLSNARFKWLTAQQITVAGHSLWALRMSYAGELGWELHI 643
Query: 251 PSEYALHVYQKIMTLGKDYNARDVGMFTQRYMRIEKFIPFWAEDLNSVT 299
P ++AL VY + G+ Y D G F +R+EK E N VT
Sbjct: 644 PRDHALAVYDALWAAGQRYGLTDYGSFAMNALRMEKAFKGAGELTNEVT 692
Score = 69 (29.3 bits), Expect = 6.2e-20, Sum P(2) = 6.2e-20
Identities = 22/84 (26%), Positives = 38/84 (45%)
Query: 11 GIGRAVAEWMTHGEATQELLSFDVQRFLDLHNNRQYLQQRIREVVGSTYRVGDPRPEMPP 70
G+ R +A W+ HG A + FD +RF + + + + RE + + P
Sbjct: 365 GLSRELARWIVHGAADISMRDFDPRRF-GAYATKDWQVIKAREDYCLRHEIPFPHFNRLA 423
Query: 71 GTFFKPK-FFDFMEEEYRACFEGV 93
G KP +D ++E+ A +E V
Sbjct: 424 GRPVKPSPLYDRLKEK-GAVYEEV 446
>RGD|621125 [details] [associations]
symbol:Sardh "sarcosine dehydrogenase" species:10116 "Rattus
norvegicus" [GO:0004047 "aminomethyltransferase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISO;ISS] [GO:0005759 "mitochondrial
matrix" evidence=IDA] [GO:0006545 "glycine biosynthetic process"
evidence=TAS] [GO:0006546 "glycine catabolic process" evidence=IEA]
[GO:0008480 "sarcosine dehydrogenase activity" evidence=TAS]
[GO:0016491 "oxidoreductase activity" evidence=IEA;NAS] [GO:0042426
"choline catabolic process" evidence=NAS;TAS] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IDA] UniPathway:UPA00292
InterPro:IPR006076 InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571
EMBL:AF067650 RGD:621125 GO:GO:0050660 GO:GO:0005759 GO:GO:0042426
GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669
eggNOG:COG0665 GO:GO:0006545 HOGENOM:HOG000251716 CTD:1757
HOVERGEN:HBG002326 KO:K00314 OrthoDB:EOG4XKV66 GO:GO:0008480
EMBL:U62481 EMBL:L79910 IPI:IPI00209807 RefSeq:NP_446116.1
UniGene:Rn.89832 ProteinModelPortal:Q64380 STRING:Q64380
PRIDE:Q64380 GeneID:114123 KEGG:rno:114123 UCSC:RGD:621125
InParanoid:Q64380 BioCyc:MetaCyc:MONOMER-16116 NextBio:618353
ArrayExpress:Q64380 Genevestigator:Q64380
GermOnline:ENSRNOG00000006916 Uniprot:Q64380
Length = 919
Score = 205 (77.2 bits), Expect = 8.0e-20, Sum P(2) = 8.0e-20
Identities = 67/258 (25%), Positives = 114/258 (44%)
Query: 72 TFFKPKFFDFMEEEYRACFEGVGIIDMSSFSKIKITCSD-ESLVDWLQQLCSNDVNIPVG 130
TF P +++E AC + +MS F K + +D DWL S DVN P G
Sbjct: 548 TFDFPPHHCVIQKECLACRTAAAVFNMSYFGKFYLLGADARKAPDWL---FSADVNRPPG 604
Query: 131 GISHTGMQNERGGYEND----CI--------LVRETE-TSYFMVSPTSQQTRVFEWMKNH 177
+T M N+RGG E+D C+ L E Y++ + + +
Sbjct: 605 STVYTCMLNQRGGTESDLTVSCLAPGAQASPLAPAFEGDGYYLAVGGAVAQHNWSHINTV 664
Query: 178 LPTKHY-ITLSDVTSKYTVINVVGPKAKQLLSELCDEDINLHPFSYKRTDIGYASD--VK 234
L + + L D + ++++ GP ++ +L ++ D D++ F + + A+ V+
Sbjct: 665 LQDQEFRCQLMDCSEDLGMLSIQGPASRDILQDVLDADLSNEAFPFSTHQLVRAAGHLVR 724
Query: 235 LMGFTHTGEPGYCLYIPSEYALHVYQKIMTLGKDYNARDVGMFTQRYMRIEKFIPFWAED 294
+ + GE G+ L++P L VY+ +M G + + G + IEK W D
Sbjct: 725 AIRLSFVGELGWELHVPQASCLPVYRAVMAAGAKHGLVNAGYRAIDSLSIEKGYRHWHAD 784
Query: 295 LNSVTTPFESGSAYRVKL 312
L S +P E+G A+ KL
Sbjct: 785 LRSDDSPLEAGLAFTCKL 802
Score = 98 (39.6 bits), Expect = 8.0e-20, Sum P(2) = 8.0e-20
Identities = 19/67 (28%), Positives = 36/67 (53%)
Query: 2 NGNSLQGAGGIGRAVAEWMTHGEATQELLSFDVQRFL-DLHNNRQYLQQRIREVVGSTYR 60
N + GG G+ +A W+ HG +++ S+D++RF L ++ +++++R E Y
Sbjct: 411 NSAGMMLGGGCGQELAHWIVHGRPEKDMYSYDIRRFHHSLTDHPRWIRERSHESYAKNYS 470
Query: 61 VGDPRPE 67
V P E
Sbjct: 471 VVFPHDE 477
>UNIPROTKB|Q64380 [details] [associations]
symbol:Sardh "Sarcosine dehydrogenase, mitochondrial"
species:10116 "Rattus norvegicus" [GO:0004047
"aminomethyltransferase activity" evidence=IEA] [GO:0006546
"glycine catabolic process" evidence=IEA] UniPathway:UPA00292
InterPro:IPR006076 InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571
EMBL:AF067650 RGD:621125 GO:GO:0050660 GO:GO:0005759 GO:GO:0042426
GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669
eggNOG:COG0665 GO:GO:0006545 HOGENOM:HOG000251716 CTD:1757
HOVERGEN:HBG002326 KO:K00314 OrthoDB:EOG4XKV66 GO:GO:0008480
EMBL:U62481 EMBL:L79910 IPI:IPI00209807 RefSeq:NP_446116.1
UniGene:Rn.89832 ProteinModelPortal:Q64380 STRING:Q64380
PRIDE:Q64380 GeneID:114123 KEGG:rno:114123 UCSC:RGD:621125
InParanoid:Q64380 BioCyc:MetaCyc:MONOMER-16116 NextBio:618353
ArrayExpress:Q64380 Genevestigator:Q64380
GermOnline:ENSRNOG00000006916 Uniprot:Q64380
Length = 919
Score = 205 (77.2 bits), Expect = 8.0e-20, Sum P(2) = 8.0e-20
Identities = 67/258 (25%), Positives = 114/258 (44%)
Query: 72 TFFKPKFFDFMEEEYRACFEGVGIIDMSSFSKIKITCSD-ESLVDWLQQLCSNDVNIPVG 130
TF P +++E AC + +MS F K + +D DWL S DVN P G
Sbjct: 548 TFDFPPHHCVIQKECLACRTAAAVFNMSYFGKFYLLGADARKAPDWL---FSADVNRPPG 604
Query: 131 GISHTGMQNERGGYEND----CI--------LVRETE-TSYFMVSPTSQQTRVFEWMKNH 177
+T M N+RGG E+D C+ L E Y++ + + +
Sbjct: 605 STVYTCMLNQRGGTESDLTVSCLAPGAQASPLAPAFEGDGYYLAVGGAVAQHNWSHINTV 664
Query: 178 LPTKHY-ITLSDVTSKYTVINVVGPKAKQLLSELCDEDINLHPFSYKRTDIGYASD--VK 234
L + + L D + ++++ GP ++ +L ++ D D++ F + + A+ V+
Sbjct: 665 LQDQEFRCQLMDCSEDLGMLSIQGPASRDILQDVLDADLSNEAFPFSTHQLVRAAGHLVR 724
Query: 235 LMGFTHTGEPGYCLYIPSEYALHVYQKIMTLGKDYNARDVGMFTQRYMRIEKFIPFWAED 294
+ + GE G+ L++P L VY+ +M G + + G + IEK W D
Sbjct: 725 AIRLSFVGELGWELHVPQASCLPVYRAVMAAGAKHGLVNAGYRAIDSLSIEKGYRHWHAD 784
Query: 295 LNSVTTPFESGSAYRVKL 312
L S +P E+G A+ KL
Sbjct: 785 LRSDDSPLEAGLAFTCKL 802
Score = 98 (39.6 bits), Expect = 8.0e-20, Sum P(2) = 8.0e-20
Identities = 19/67 (28%), Positives = 36/67 (53%)
Query: 2 NGNSLQGAGGIGRAVAEWMTHGEATQELLSFDVQRFL-DLHNNRQYLQQRIREVVGSTYR 60
N + GG G+ +A W+ HG +++ S+D++RF L ++ +++++R E Y
Sbjct: 411 NSAGMMLGGGCGQELAHWIVHGRPEKDMYSYDIRRFHHSLTDHPRWIRERSHESYAKNYS 470
Query: 61 VGDPRPE 67
V P E
Sbjct: 471 VVFPHDE 477
>UNIPROTKB|F1NBJ7 [details] [associations]
symbol:SARDH "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004047 "aminomethyltransferase activity" evidence=IEA]
[GO:0006546 "glycine catabolic process" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR006076 InterPro:IPR006222 Pfam:PF01266
Pfam:PF01571 GO:GO:0005739 GO:GO:0016491 GO:GO:0004047
GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669
GeneTree:ENSGT00530000063120 OMA:PHHDVIK EMBL:AADN02026458
EMBL:AADN02026459 EMBL:AADN02026460 EMBL:AADN02026461
IPI:IPI00571388 ProteinModelPortal:F1NBJ7
Ensembl:ENSGALT00000004499 Uniprot:F1NBJ7
Length = 906
Score = 200 (75.5 bits), Expect = 1.1e-19, Sum P(2) = 1.1e-19
Identities = 70/260 (26%), Positives = 114/260 (43%)
Query: 72 TFFKPKFFDFMEEEYRACFEGVGIIDMSSFSKIKITCSDES-LVDWLQQLCSNDVNIPVG 130
TF P + +++E C V + +MS F K + + + +WL S DV+ G
Sbjct: 535 TFDFPPHHNIIKKECLTCRNAVALFNMSYFGKFYLVGPEATKAANWL---FSADVSKAPG 591
Query: 131 GISHTGMQNERGGYENDCILVRETETSYFM-VSPTSQQTRVF----------EWMKNHLP 179
+T M N+RGG E+D + R + ++P Q + W +H+
Sbjct: 592 STVYTCMLNKRGGVESDLTVSRISPGDPSSPLAPAFQGDGYYLAIGGAVAQHNW--SHIT 649
Query: 180 T-----KHYITLSDVTSKYTVINVVGPKAKQLLSELCDEDIN--LHPFSYKRTDIGYASD 232
K L D + + ++++ GP ++ +L EL D D++ PFS R
Sbjct: 650 AVLQDMKLQCKLIDCSEELGMMSLQGPLSRTVLQELLDTDLSNEAFPFSTHRLVKAAGCT 709
Query: 233 VKLMGFTHTGEPGYCLYIPSEYALHVYQKIMTLGKDYNARDVGMFTQRYMRIEKFIPFWA 292
V+ M + GE G+ L++P E + VYQ +M G + + G + IEK W
Sbjct: 710 VRAMRLSFVGELGWELHVPREDCVRVYQAVMEAGARHGITNAGYRAIDSLSIEKGYRHWH 769
Query: 293 EDLNSVTTPFESGSAYRVKL 312
DL TP E+G A+ KL
Sbjct: 770 ADLRPDDTPLEAGLAFTCKL 789
Score = 103 (41.3 bits), Expect = 1.1e-19, Sum P(2) = 1.1e-19
Identities = 19/67 (28%), Positives = 35/67 (52%)
Query: 2 NGNSLQGAGGIGRAVAEWMTHGEATQELLSFDVQRF-LDLHNNRQYLQQRIREVVGSTYR 60
N + GG G+ +A W+ HG +++ +D++RF L +N +++++R E Y
Sbjct: 398 NSAGMMLGGGCGKELAHWIIHGRPEKDMYGYDIRRFHCSLTDNNRWIRERSHESYAKNYS 457
Query: 61 VGDPRPE 67
V P E
Sbjct: 458 VVFPHDE 464
>MGI|MGI:2183102 [details] [associations]
symbol:Sardh "sarcosine dehydrogenase" species:10090 "Mus
musculus" [GO:0004047 "aminomethyltransferase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005759 "mitochondrial matrix"
evidence=ISO] [GO:0006546 "glycine catabolic process" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0008480
"sarcosine dehydrogenase activity" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0050660 "flavin adenine
dinucleotide binding" evidence=ISO] [GO:0055114
"oxidation-reduction process" evidence=IEA] UniPathway:UPA00292
InterPro:IPR006076 InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571
MGI:MGI:2183102 GO:GO:0005739 GO:GO:0050660 GO:GO:0005759
GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669
eggNOG:COG0665 HOGENOM:HOG000251716 GeneTree:ENSGT00530000063120
CTD:1757 HOVERGEN:HBG002326 KO:K00314 OMA:PHHDVIK OrthoDB:EOG4XKV66
GO:GO:0008480 EMBL:BC003456 IPI:IPI00136213 RefSeq:NP_619606.1
UniGene:Mm.278467 ProteinModelPortal:Q99LB7 SMR:Q99LB7
STRING:Q99LB7 PhosphoSite:Q99LB7 PaxDb:Q99LB7 PRIDE:Q99LB7
Ensembl:ENSMUST00000102886 GeneID:192166 KEGG:mmu:192166
InParanoid:Q99LB7 NextBio:371164 Bgee:Q99LB7 CleanEx:MM_SARDH
Genevestigator:Q99LB7 GermOnline:ENSMUSG00000009614 Uniprot:Q99LB7
Length = 919
Score = 202 (76.2 bits), Expect = 1.6e-19, Sum P(2) = 1.6e-19
Identities = 66/258 (25%), Positives = 113/258 (43%)
Query: 72 TFFKPKFFDFMEEEYRACFEGVGIIDMSSFSKIKITCSD-ESLVDWLQQLCSNDVNIPVG 130
TF P +++E AC + +MS F K + D DWL S DVN P G
Sbjct: 548 TFDFPPHHHMIQKECLACRGAAAVFNMSYFGKFYLLGVDARKAADWL---FSADVNRPPG 604
Query: 131 GISHTGMQNERGGYENDCILVR---ETETS----------YFMVSPTSQQTRVFEWMKNH 177
+T M N+RGG E+D + R T+ S Y++ + + +
Sbjct: 605 STVYTCMLNQRGGTESDLTVSRLAPGTQASPLVPAFEGDCYYLAVGGAVAQHNWSHINTV 664
Query: 178 LPTKHY-ITLSDVTSKYTVINVVGPKAKQLLSELCDEDINLHPFSYKRTDIGYASD--VK 234
L + + L D + ++++ GP ++ +L ++ D D++ F + + A+ V+
Sbjct: 665 LQDQEFRCQLMDSSEDLGMLSIQGPASRDILQDVLDADLSNEAFPFSTHQLVRAAGHLVR 724
Query: 235 LMGFTHTGEPGYCLYIPSEYALHVYQKIMTLGKDYNARDVGMFTQRYMRIEKFIPFWAED 294
+ + GE G+ L++P L VY+ +M G + + G + IEK W D
Sbjct: 725 AIRLSFVGELGWELHVPRASCLPVYRAVMAAGARHGLVNAGYRAIDSLSIEKGYRHWHAD 784
Query: 295 LNSVTTPFESGSAYRVKL 312
L +P E+G A+ KL
Sbjct: 785 LRPDDSPLEAGLAFTCKL 802
Score = 99 (39.9 bits), Expect = 1.6e-19, Sum P(2) = 1.6e-19
Identities = 19/67 (28%), Positives = 36/67 (53%)
Query: 2 NGNSLQGAGGIGRAVAEWMTHGEATQELLSFDVQRFL-DLHNNRQYLQQRIREVVGSTYR 60
N + GG G+ +A W+ HG +++ S+D++RF L ++ +++++R E Y
Sbjct: 411 NSAGMMLGGGCGQELAHWIVHGRPEKDMYSYDIRRFHHSLTDHTRWIRERSHESYAKNYS 470
Query: 61 VGDPRPE 67
V P E
Sbjct: 471 VVFPHDE 477
>UNIPROTKB|F1S0R9 [details] [associations]
symbol:SARDH "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0006546 "glycine
catabolic process" evidence=IEA] [GO:0004047
"aminomethyltransferase activity" evidence=IEA] InterPro:IPR006076
InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571 GO:GO:0005739
GO:GO:0016491 GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977
Pfam:PF08669 GeneTree:ENSGT00530000063120 CTD:1757 KO:K00314
OMA:PHHDVIK EMBL:CU572088 RefSeq:NP_001240851.1 UniGene:Ssc.32260
Ensembl:ENSSSCT00000006311 GeneID:100154338 KEGG:ssc:100154338
Uniprot:F1S0R9
Length = 918
Score = 206 (77.6 bits), Expect = 2.3e-19, Sum P(2) = 2.3e-19
Identities = 71/260 (27%), Positives = 112/260 (43%)
Query: 72 TFFKPKFFDFMEEEYRACFEGVGIIDMSSFSKIKITCSD-ESLVDWLQQLCSNDVNIPVG 130
TF P D +++E AC + DMS F K + D DWL S DV+ P G
Sbjct: 547 TFDFPPHHDVIKKECLACRGAAAVFDMSYFGKFYLVGPDARKAADWL---FSADVSRPPG 603
Query: 131 GISHTGMQNERGGYENDCILVRETETSYFM-VSPTSQQTRVF----------EWMKNHLP 179
+T M N RGG E+D + R + ++P + + W HL
Sbjct: 604 STVYTCMLNHRGGTESDLTVSRLAPSPQASPLTPAFEGDGYYLAVGGAVAQHNWC--HLT 661
Query: 180 T-----KHYITLSDVTSKYTVINVVGPKAKQLLSELCDEDINLHPFSYKRTDIGYASD-- 232
T + L D + +I++ GP ++ +L E+ D D++ F + + A+
Sbjct: 662 TVLQDRQFRCQLVDRSEDLGLISIQGPASRAILQEVLDADLSNEAFPFSTHKLVRAAGHL 721
Query: 233 VKLMGFTHTGEPGYCLYIPSEYALHVYQKIMTLGKDYNARDVGMFTQRYMRIEKFIPFWA 292
V+ + + GE G+ L+IP L VY+ +MT G + + G + EK W
Sbjct: 722 VRAIRLSFVGELGWELHIPRPSCLPVYRAVMTAGAKHGLVNAGYRAVDSLSTEKGYRHWH 781
Query: 293 EDLNSVTTPFESGSAYRVKL 312
DL +P E+G A+ KL
Sbjct: 782 ADLRPDDSPLEAGLAFTCKL 801
Score = 92 (37.4 bits), Expect = 2.3e-19, Sum P(2) = 2.3e-19
Identities = 17/67 (25%), Positives = 35/67 (52%)
Query: 2 NGNSLQGAGGIGRAVAEWMTHGEATQELLSFDVQRFL-DLHNNRQYLQQRIREVVGSTYR 60
N + GG G+ +A W+ HG +++ +D++RF L ++ +++++R E Y
Sbjct: 410 NSAGMMLGGGCGQELAHWIVHGRPEKDMHGYDIRRFHHSLTDHSRWIRERSHESYAKNYS 469
Query: 61 VGDPRPE 67
+ P E
Sbjct: 470 IVFPHDE 476
>TIGR_CMR|SPO_0564 [details] [associations]
symbol:SPO_0564 "aminomethyl transferase family protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004047
"aminomethyltransferase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] [GO:0050660 "flavin adenine
dinucleotide binding" evidence=ISS] InterPro:IPR006076
InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571 GO:GO:0005737
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0016491 GO:GO:0004047
GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669 HOGENOM:HOG000251716
KO:K00315 ProtClustDB:CLSK863205 RefSeq:YP_165824.1
ProteinModelPortal:Q5LVY1 GeneID:3193816 KEGG:sil:SPO0564
PATRIC:23374391 OMA:AKQVGRM Uniprot:Q5LVY1
Length = 802
Score = 171 (65.3 bits), Expect = 2.3e-18, Sum P(2) = 2.3e-18
Identities = 56/221 (25%), Positives = 101/221 (45%)
Query: 84 EEYRACFEGVGIIDMSSFSKIKITCSDESLVDWLQQLCSNDVNIPVGGISHTGMQNERGG 143
EE R EGVG++D++ FS+ ++ S + WL +L + + P G M +E G
Sbjct: 470 EECRVIREGVGLLDITGFSRFEV--SGPNAEAWLDKLFATKLPAP-GRARLAVMLSETGR 526
Query: 144 YENDCILVRETETSYFMVSPTSQQTRVFEWMKNHLPTKHYITLSDVTSKYTVINVVGPKA 203
+ D L+ + +++++ + W +HL +++ D+ + +VGPK+
Sbjct: 527 LKGDLTLLNWGDGTWWIMGSYYLRAWHMRWFNDHLDDG--VSVRDLGEEICGFGLVGPKS 584
Query: 204 KQLLSELCDEDINLHPF-SYKRTDIGYASDVKLMGFTHTGEPGYCLYIPSEYALHVYQKI 262
+ ++ +L ++DI+ F DIG ++ + TGE GY I Y H+ +
Sbjct: 585 RTVIEKLAEQDISELKFMGCGSFDIGLVR-ARVARMSVTGEMGY--EINCRYGDHIALRR 641
Query: 263 MTL--GKDYNARDVGMFTQRYMRIEKFIPFWAEDLNSVTTP 301
M L G + +VG RIEK W+ + TP
Sbjct: 642 MLLEAGAGEDICEVGFNALLSTRIEKSFGIWSAEFTQDRTP 682
Score = 124 (48.7 bits), Expect = 2.3e-18, Sum P(2) = 2.3e-18
Identities = 23/66 (34%), Positives = 38/66 (57%)
Query: 6 LQGAGGIGRAVAEWMTHGEATQELLSFDVQRFLDLHNNRQYLQQRIREVVGSTYRVGDPR 65
LQG GG+G+ +AEWM HGE + S DV R+ D N++Y+++ + + + P
Sbjct: 352 LQG-GGVGKTLAEWMIHGEPEADAWSMDVARYGDYAQNKRYIRETTGQFYSRRFVMSYPN 410
Query: 66 PEMPPG 71
++P G
Sbjct: 411 EQLPAG 416
>WB|WBGene00021355 [details] [associations]
symbol:Y37E3.17 species:6239 "Caenorhabditis elegans"
[GO:0005215 "transporter activity" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0004047
"aminomethyltransferase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006546 "glycine catabolic process"
evidence=IEA] InterPro:IPR006076 InterPro:IPR006222 Pfam:PF01266
Pfam:PF01571 GO:GO:0005737 GO:GO:0016491 GO:GO:0004047
GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669 eggNOG:COG0665
GeneTree:ENSGT00530000063120 EMBL:FO081769 GeneID:171775
KEGG:cel:CELE_Y37E3.17 CTD:171775 RefSeq:NP_001021746.1
ProteinModelPortal:Q6AW03 SMR:Q6AW03 STRING:Q6AW03 PaxDb:Q6AW03
PRIDE:Q6AW03 EnsemblMetazoa:Y37E3.17b UCSC:Y37E3.17b
WormBase:Y37E3.17b HOGENOM:HOG000022206 InParanoid:Q6AW03
OMA:IWGKELT NextBio:872635 ArrayExpress:Q6AW03 Uniprot:Q6AW03
Length = 837
Score = 191 (72.3 bits), Expect = 6.2e-17, Sum P(2) = 6.2e-17
Identities = 58/229 (25%), Positives = 104/229 (45%)
Query: 85 EYRACFEGVGIIDMSSFSKIKITCSD-ESLVDWLQQLCSNDVNIP-VGGISHTGMQNERG 142
EY G+ID+S KI++ +D E L+D+ + S IP +G IS M G
Sbjct: 496 EYEMVTNKCGVIDLSWKGKIEVKGNDAEKLMDYA--IASQ---IPALGKISSGLMLTRHG 550
Query: 143 GYENDCILVRETE--TSYFMVSPTSQQTRVFEWMKNHLPTKHYITLSDVTSKYTV-INVV 199
G ++ +++ +++ +++R W++ K + + S+Y + +V
Sbjct: 551 GILGPMMIFHHDRQRSAFILLTEPERESRDLYWLRRAAAEKKFDVQVSIVSEYLASLALV 610
Query: 200 GPKAKQLLSELCDEDINLHPFSYKRTD---IGYASDVKLMGFTHTGEPGYCLYIPSEYAL 256
GPK++++LS L D++ F K T +G V T TG+ Y L+
Sbjct: 611 GPKSREVLSALTKSDVSDEGFPQKSTRMIRLGPVGVVCARSSTSTGQLSYELFHNRAETA 670
Query: 257 HVYQKIMTLGKDYNARDVGMFTQRYMRIEKFIPFWAEDLNSVTTPFESG 305
+Y +M+ G+++ + G MR+E W ++L T PFE G
Sbjct: 671 KLYNAVMSAGREHGIVNFGQAALNMMRLEHGYKIWGKELTLDTNPFECG 719
Score = 87 (35.7 bits), Expect = 6.2e-17, Sum P(2) = 6.2e-17
Identities = 17/56 (30%), Positives = 29/56 (51%)
Query: 4 NSLQGAGGIGRAVAEWMTHGEATQELLSFDVQRFLDLHNNRQYLQQRIREVVGSTY 59
+ + GGIG+ +A+W+ GE EL D R+ + +R++ +R RE Y
Sbjct: 384 DGVSSGGGIGKYLADWIVDGEPPAELFDTDASRY-ERWGDRKFFTERSRETYSMYY 438
>TIGR_CMR|SPO_1628 [details] [associations]
symbol:SPO_1628 "aminomethyl transferase family protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004047
"aminomethyltransferase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] [GO:0050660 "flavin adenine
dinucleotide binding" evidence=ISS] InterPro:IPR006076
InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571 GO:GO:0005737
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0016491 GO:GO:0004047
GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669 HOGENOM:HOG000251716
KO:K00315 ProtClustDB:CLSK863205 RefSeq:YP_166869.1
ProteinModelPortal:Q5LSY6 GeneID:3193115 KEGG:sil:SPO1628
PATRIC:23376579 OMA:MGLETEI Uniprot:Q5LSY6
Length = 802
Score = 189 (71.6 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 62/254 (24%), Positives = 111/254 (43%)
Query: 55 VGSTYRVGD-PRPEMPPGTFFKPKFFDFMEEEYRACFEGVGIIDMSSFSKIKITCSDESL 113
V + + GD P E P +F + F E R GVGI ++ +F K + S
Sbjct: 442 VANYFAQGDEPTYETP--SFRRSDAFAATGREVRGVRAGVGINELHNFGKYLV--SGPGA 497
Query: 114 VDWLQQLCSNDVNIPVGG-ISHTGMQNERGGYENDCILVRETETSYFMVSPTSQQTRVFE 172
WL ++ + IP G +S T M + +G D + ET + + + Q
Sbjct: 498 RAWLDRIMAG--RIPATGRLSLTPMLSAKGKLIGDFTVSCLGETEFQLTASYGSQDYHMR 555
Query: 173 WMKNHLPTKHYITLSDVTSKYTVINVVGPKAKQLLSELCDEDI-NLHPFSYKRTDIGYAS 231
W + H + IT+ +++ K + GP A+ +L+ +D+ NL +R +G +
Sbjct: 556 WFEQH--QEDGITIENISDKRNGFQIAGPNARAVLAACTRDDVDNLRFMDVRRMVVGM-T 612
Query: 232 DVKLMGFTHTGEPGYCLYIPSEYALHVYQKIMTLGKDYNARDVGMFTQRYMRIEKFIPFW 291
D + ++TG+ GY +Y S ++ + G+D+ GM +R++KF W
Sbjct: 613 DCIVQRVSYTGDLGYEIYCDSMAQRQLWWTLWQAGQDHGMIPFGMRAMMSLRLDKFFGSW 672
Query: 292 AEDLNSVTTPFESG 305
+ + T E+G
Sbjct: 673 LREFSPDYTAAETG 686
Score = 86 (35.3 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 23/69 (33%), Positives = 36/69 (52%)
Query: 1 MNGNSLQGAGGIGRAVAEWMTHGEATQELLSFDVQRFLDLHNNRQYLQQRIREVVGSTYR 60
M G S QG GG+G +A+WM GE +++ + DV RF + Y + ++ E +
Sbjct: 348 MAGFS-QG-GGVGLMLAQWMIEGETERDVTAMDVARF-GRWISPGYTRPKVIENYQKRFS 404
Query: 61 VGDPRPEMP 69
V P E+P
Sbjct: 405 VSYPNEELP 413
>TIGR_CMR|SPO_A0310 [details] [associations]
symbol:SPO_A0310 "aminomethyl transferase family protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004047
"aminomethyltransferase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR006076
InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571 GO:GO:0005737
GO:GO:0016491 GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977
Pfam:PF08669 EMBL:CP000032 GenomeReviews:CP000032_GR
HOGENOM:HOG000251716 ProtClustDB:CLSK863205 RefSeq:YP_165137.1
ProteinModelPortal:Q5LKS1 GeneID:3196699 KEGG:sil:SPOA0310
PATRIC:23381966 Uniprot:Q5LKS1
Length = 803
Score = 189 (71.6 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 55/223 (24%), Positives = 108/223 (48%)
Query: 85 EYRACFEGVGIIDMSSFSKIKITCSDESLVDWLQQLCSNDVNIPVGGISHTGMQNERGGY 144
E +A G+ID+ +F++ +IT +D + L +L +N + G +S + E+G +
Sbjct: 472 EAQATRATAGVIDLCAFAQFEITGTDAGKL--LNRLSANRIPHKDGRMSLNHLLTEKGRF 529
Query: 145 ENDCILVRETETSYFMVSPTSQQTRVFEWMKNHLPTKHYITLSDVTSKYTVINVVGPKAK 204
E + + R E YF SP ++ F W+K+H+ + + + ++ + ++ + GP ++
Sbjct: 530 ETEITIWRINENRYFTGSPITRANPDFAWIKSHIRPGEDVQMVNRSADWGMLAMSGPASR 589
Query: 205 QLLSELCDEDINLHPFSY-KRTDIGYAS-DVKLMGFTHTGEPGYCLYIPSEYALHVYQKI 262
++LSEL D D++ F + +I A + + GE G+ L+ +Y +
Sbjct: 590 RILSELTDADLSNAAFPWLSGQEITVAGVPCYALRVSFVGELGWELHALLNRIPELYDAL 649
Query: 263 MTLGKDYNARDVGMFTQRYMRIEKFIPFWAEDLNSVTTPFESG 305
+G + D+G + MR+EK E L + PF+ G
Sbjct: 650 FDVGSAHGLTDLGSYAFNGMRMEKAYRASGE-LTTDIGPFDVG 691
Score = 84 (34.6 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 16/48 (33%), Positives = 28/48 (58%)
Query: 6 LQGAGGIGRAVAEWMTHGEATQELLSFDVQRFLDLHNNRQYLQQRIRE 53
L GG G+ +A+WM HGE + S D +R+ D ++ Y+ +R ++
Sbjct: 354 LAWGGGAGKVLADWMVHGETSINTRSLDPRRYGDFASDH-YIVERTKD 400
>TIGR_CMR|SPO_A0063 [details] [associations]
symbol:SPO_A0063 "FAD dependent
oxidoreductase/aminomethyl transferase" species:246200 "Ruegeria
pomeroyi DSS-3" [GO:0004047 "aminomethyltransferase activity"
evidence=ISS] [GO:0008152 "metabolic process" evidence=ISS]
[GO:0016491 "oxidoreductase activity" evidence=ISS] [GO:0050660
"flavin adenine dinucleotide binding" evidence=ISS]
InterPro:IPR006076 InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571
GO:GO:0005737 GO:GO:0016491 GO:GO:0004047 GO:GO:0006546
InterPro:IPR013977 Pfam:PF08669 EMBL:CP000032
GenomeReviews:CP000032_GR HOGENOM:HOG000251716 KO:K00315
ProtClustDB:CLSK863205 RefSeq:YP_164894.1 ProteinModelPortal:Q5LLG4
GeneID:3196774 KEGG:sil:SPOA0063 PATRIC:23381430 OMA:PVASMEH
Uniprot:Q5LLG4
Length = 811
Score = 204 (76.9 bits), Expect = 2.6e-16, Sum P(2) = 2.6e-16
Identities = 64/259 (24%), Positives = 114/259 (44%)
Query: 64 PRPEMPPG-TFFKPKFFDFMEEEYRACFEGVGIIDMSSFSKIKITCSDESLVDWLQQLCS 122
P PE P TF + FD + E +A VG+ +++ F++I+IT S +L ++
Sbjct: 449 PSPEFHPSLTFDFDEAFDVVAAEVKAVQNSVGLAEVNGFNRIEITGSGRHA--FLDRMFC 506
Query: 123 NDVNIPVGGISHTGMQNERGGYENDCILVRETETS-----YFMVSPTSQQTRVFEWMKNH 177
V G + + N G + + + + + S + + +W+ H
Sbjct: 507 GSVTKRAGRVGLGYLLNHHGMIKAEATIANLPASDRGPARVWYGSAAASEFHDMDWLSQH 566
Query: 178 LPTKHYITLSDVTSKYTVINVVGPKAKQLLSELCDEDINLHPF---SYKRTDIGYASDVK 234
+ + L +T+ T++ + GP+A+ +LS D + F S + IG+A
Sbjct: 567 IQPGEDVQLRSLTNDQTILVLAGPRARAVLSACARGDWSREAFPWLSVRECFIGFAP-AT 625
Query: 235 LMGFTHTGEPGYCLYIPSEYALHVYQKIMTLGKDYNARDVGMFTQRYMRIEKFIPFWAED 294
+MG + +GE Y ++IP+ Y + G+ + G MR+EK W D
Sbjct: 626 VMGVSFSGELAYEIHIPNASLYAAYLALRKAGEAHGLTLFGARAVESMRMEKGFLHWKAD 685
Query: 295 LNSVTTPFESGSAYRVKLD 313
L + PFE+G + VKLD
Sbjct: 686 LITEFDPFETGLSRFVKLD 704
Score = 64 (27.6 bits), Expect = 2.6e-16, Sum P(2) = 2.6e-16
Identities = 18/62 (29%), Positives = 27/62 (43%)
Query: 10 GGIGRAVAEWMTHGEATQELLSFDVQRFLDLHNNRQYLQQRIREVVGSTYRVGDPRPEMP 69
GG G +A+ + HGEA + D +RF H N + + E + +R P P
Sbjct: 356 GGHGWLLAQMIVHGEACYDTWCIDPRRFTG-HANVELTALKAIEDYQNEFRFHFPHEHRP 414
Query: 70 PG 71
G
Sbjct: 415 AG 416
>UNIPROTKB|D4A8Z7 [details] [associations]
symbol:Sardh "Sarcosine dehydrogenase, mitochondrial"
species:10116 "Rattus norvegicus" [GO:0004047
"aminomethyltransferase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006546 "glycine catabolic process"
evidence=IEA] InterPro:IPR006222 Pfam:PF01571 GO:GO:0005737
GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669
IPI:IPI00781340 Ensembl:ENSRNOT00000061188 ArrayExpress:D4A8Z7
Uniprot:D4A8Z7
Length = 509
Score = 143 (55.4 bits), Expect = 8.5e-16, Sum P(3) = 8.5e-16
Identities = 34/129 (26%), Positives = 63/129 (48%)
Query: 186 LSDVTSKYTVINVVGPKAKQLLSELCDEDINLHPFSYKRTDIGYASD--VKLMGFTHTGE 243
L D + ++++ GP ++ +L ++ D D++ F + + A+ V+ + + GE
Sbjct: 264 LMDCSEDLGMLSIQGPASRDILQDVLDADLSNEAFPFSTHQLVRAAGHLVRAIRLSFVGE 323
Query: 244 PGYCLYIPSEYALHVYQKIMTLGKDYNARDVGMFTQRYMRIEKFIPFWAEDLNSVTTPFE 303
G+ L++P L VY+ +M G + + G + IEK W DL S +P E
Sbjct: 324 LGWELHVPQASCLPVYRAVMAAGAKHGLVNAGYRAIDSLSIEKGYRHWHADLRSDDSPLE 383
Query: 304 SGSAYRVKL 312
+G A+ KL
Sbjct: 384 AGLAFTCKL 392
Score = 87 (35.7 bits), Expect = 8.5e-16, Sum P(3) = 8.5e-16
Identities = 19/69 (27%), Positives = 36/69 (52%)
Query: 2 NGNSLQGAGGIGRAVAEWMTHGEATQELLSFDVQ--RFL-DLHNNRQYLQQRIREVVGST 58
N + GG G+ +A W+ HG +++ S+D++ RF L ++ +++++R E
Sbjct: 37 NSAGMMLGGGCGQELAHWIVHGRPEKDMYSYDIRQVRFHHSLTDHPRWIRERSHESYAKN 96
Query: 59 YRVGDPRPE 67
Y V P E
Sbjct: 97 YSVVFPHDE 105
Score = 75 (31.5 bits), Expect = 8.5e-16, Sum P(3) = 8.5e-16
Identities = 20/61 (32%), Positives = 29/61 (47%)
Query: 71 GTFFKPKFFDFMEEEYRACFEGVGIIDMSSFSKIKITCSD-ESLVDWLQQLCSNDVNIPV 129
GT+ P + +++E AC + +MS F K + +D DWL S DVN P
Sbjct: 175 GTYDYPDHSEMIQKECLACRTAAAVFNMSYFGKFYLLGADARKAADWL---FSADVNRPP 231
Query: 130 G 130
G
Sbjct: 232 G 232
>TIGR_CMR|SPO_0207 [details] [associations]
symbol:SPO_0207 "aminomethyl transferase family protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004047
"aminomethyltransferase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] [GO:0050660 "flavin adenine
dinucleotide binding" evidence=ISS] InterPro:IPR006076
InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571 GO:GO:0005737
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0016491 GO:GO:0004047
GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669 HOGENOM:HOG000251716
KO:K00315 ProtClustDB:CLSK863205 RefSeq:YP_165477.1
ProteinModelPortal:Q5LWZ7 GeneID:3195798 KEGG:sil:SPO0207
PATRIC:23373663 OMA:WHAAANI Uniprot:Q5LWZ7
Length = 805
Score = 181 (68.8 bits), Expect = 3.2e-15, Sum P(2) = 3.2e-15
Identities = 59/243 (24%), Positives = 103/243 (42%)
Query: 73 FFKPKFFDFMEEEYRACFEGVGIIDMSSFSKIKITCSDESLVDWLQQLCSNDVNIPVGGI 132
F + +++ + E R E VG+ID+S+F+ +I DWL +L +N V G
Sbjct: 458 FTRQNWWEPVGREARMLREQVGVIDISNFANYEI--KGPGAHDWLDRLVANRVPTVEGRS 515
Query: 133 SHTGMQNERGGYENDCILVRETETSYFMVSPTSQQTRVFEWMKNHLPTKHYITLSDVTSK 192
T + RGG D + E +Y MV + R + N + T T++
Sbjct: 516 CLTPLIGVRGGIAGDFTITMTGEDAYMMVG-SGMAERYHQRFFNMVDLPEGTTCEVATNR 574
Query: 193 YTVINVVGPKAKQLLSELCDEDINLHPFSYKRTDIGYASDVKLMGF--THTGEPGYCLYI 250
NV GP+A+++L L + D++ F + R+ + V + + TG+ G L+
Sbjct: 575 IAGYNVAGPRAREMLQRLTNADLSNAGFPFMRSATIEVAGVACLAIRVSFTGDLGCELHC 634
Query: 251 PSEYALHVYQKIMTLGKDYNARDVGMFTQRYMRIEKFIPFWAEDLNSVTTPFESGSAYRV 310
+ +Y ++ ++ VG +RIEK W + + P E G +
Sbjct: 635 AEGDQVRLYTALIAAAREVGGGPVGSRALGSLRIEKGYGSWGREYSPEYWPQEVGLDRLI 694
Query: 311 KLD 313
K D
Sbjct: 695 KAD 697
Score = 82 (33.9 bits), Expect = 3.2e-15, Sum P(2) = 3.2e-15
Identities = 16/63 (25%), Positives = 33/63 (52%)
Query: 9 AGGIGRAVAEWMTHGEATQELLSFDVQRFLDLHNNRQYLQQRIREVVGSTYRVGDPRPEM 68
+GG+G A+WM GE ++ ++D+ RF D + + + + R+++ + + P E
Sbjct: 354 SGGLGLLAAQWMIEGEPQNDMFAWDLARFGDWAD-KTFTKARVQDQYTHRFAIHFPNEER 412
Query: 69 PPG 71
G
Sbjct: 413 SAG 415
>UNIPROTKB|Q48CP0 [details] [associations]
symbol:soxA "Sarcosine oxidase, alpha subunit"
species:264730 "Pseudomonas syringae pv. phaseolicola 1448A"
[GO:0008115 "sarcosine oxidase activity" evidence=ISS] [GO:0009063
"cellular amino acid catabolic process" evidence=ISS]
InterPro:IPR000103 InterPro:IPR006222 InterPro:IPR006277
InterPro:IPR013027 Pfam:PF01571 PIRSF:PIRSF037980 PRINTS:PR00368
PRINTS:PR00469 GO:GO:0005737 GO:GO:0009063 EMBL:CP000058
GenomeReviews:CP000058_GR eggNOG:COG0446 GO:GO:0046653
GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669
GO:GO:0008115 HOGENOM:HOG000218134 KO:K00302 OMA:RECKAVR
ProtClustDB:CLSK869336 PANTHER:PTHR13847:SF41 TIGRFAMs:TIGR01372
RefSeq:YP_276853.1 ProteinModelPortal:Q48CP0 STRING:Q48CP0
GeneID:3558593 KEGG:psp:PSPPH_4753 PATRIC:19979003 Uniprot:Q48CP0
Length = 1006
Score = 210 (79.0 bits), Expect = 8.2e-15, Sum P(2) = 8.2e-15
Identities = 59/223 (26%), Positives = 104/223 (46%)
Query: 85 EYRACFEGVGIIDMSSFSKIKITCSDESLVDWLQQLCSND-VNIPVGGISHTGMQNERGG 143
E +A + VG++D S+ KI I D ++L ++ +N + VG + M E G
Sbjct: 657 ECKAVRDSVGLLDASTLGKIDIQGPDAR--EFLNRIYTNAWTKLDVGKARYGLMCKEDGM 714
Query: 144 YENDCILVRETETSYFMVSPTSQQTRVFEWMKNHLPTKH---YITLSDVTSKYTVINVVG 200
+D + + + M + T RV +W++ + T+ + + VT + + + G
Sbjct: 715 VFDDGVTACLADNHFLMTTTTGGAARVLQWLEIYQQTEWPDLKVYFTSVTDHWATLTLSG 774
Query: 201 PKAKQLLSELCDEDINLHPFSYKRTDIGYASDV--KLMGFTHTGEPGYCLYIPSEYALHV 258
P +++LLSE+ D D+ F + G + V ++ + TGE Y + I ++YA+ V
Sbjct: 775 PNSRKLLSEVTDIDLGREAFPFMTWKEGLVAGVPARVFRISFTGELSYEVNIQADYAMGV 834
Query: 259 YQKIMTLGKDYNARDVGMFTQRYMRIEKFIPFWAEDLNSVTTP 301
+KI GK YN G T +R EK +D + TP
Sbjct: 835 LEKIAEAGKQYNLTPYGTETMHVLRAEKGFIIVGQDTDGSMTP 877
Score = 44 (20.5 bits), Expect = 8.2e-15, Sum P(2) = 8.2e-15
Identities = 15/46 (32%), Positives = 23/46 (50%)
Query: 53 EVVGSTYRVGDPRPEMPPGTFFK----PKFFDFMEEEYRACFEGVG 94
+V+G +VG MPPG ++K P+ F E+Y G+G
Sbjct: 110 DVMGILGKVGGKL--MPPGFYYKTFMYPQSFWMTYEKYIRKAAGLG 153
>TIGR_CMR|SPO_3400 [details] [associations]
symbol:SPO_3400 "aminomethyl transferase family protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004047
"aminomethyltransferase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR006076
InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571 GO:GO:0005737
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0016491 GO:GO:0004047
GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669 HOGENOM:HOG000251716
KO:K00315 ProtClustDB:CLSK863205 RefSeq:YP_168596.1
ProteinModelPortal:Q5LN12 GeneID:3193141 KEGG:sil:SPO3400
PATRIC:23380255 OMA:DPMPEDF Uniprot:Q5LN12
Length = 815
Score = 165 (63.1 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
Identities = 53/233 (22%), Positives = 110/233 (47%)
Query: 82 MEEEYRACFEGVGIIDMSSFSKIKITCSDESLVDWLQQLCSNDVNIP-VGGISHTGMQNE 140
++EE +A + G++D+ FS+ + + L+ L + +P VG ++ +
Sbjct: 485 IKEECQAVRDHCGVLDLPGFSRFLV--KGAGAAEALRGLITG--GLPKVGRMNLVYISES 540
Query: 141 RGGYENDCILVRETETSYFMVSPTSQQTRVFEWMKNHLPTKHYITLSDVTSKYTVINVVG 200
RG + +R E + M++ + Q + + +P +T+ DVT+ + V G
Sbjct: 541 RGRILTEMSCIRLGEDEFVMITAATAQWHDRDILLGAMPAG--VTVEDVTTTRDTLIVTG 598
Query: 201 PKAKQLLSELCDEDINLHPFSYKRTDIGYASDVKLMGFTHTGEPGYCLYIPSEYALHVYQ 260
PK++++L+ L D D++ +++ + L+ + GE G+ ++ +E+ +Y
Sbjct: 599 PKSREILAGLSDADLSQGWLTHQAATVA-GQPAFLIRVSFAGELGWEVHALNEHMPAIYD 657
Query: 261 KIMTLGKDYNARDVGMFTQRYMRIEKFIPFWAEDLNSVTTPFESGSAYRVKLD 313
++ G A+ GM+ +R+EK W DL++ + E G VKLD
Sbjct: 658 ALLGAG----AKPFGMWALNSLRLEKGYRAWKGDLSTDYSMLEGGLERFVKLD 706
Score = 93 (37.8 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
Identities = 21/63 (33%), Positives = 34/63 (53%)
Query: 7 QGAGGIGRAVAEWMTHGEATQELLSFDVQRFLDLHNNRQYLQQRIREVVGSTYRVGDPRP 66
QG GG G+ +AEW+ G+ ++ S D +R+ D + + Y Q+ EV G+ Y + P
Sbjct: 367 QG-GGAGKVLAEWIVDGQTEWDMWSCDPRRYTD-YTDHDYCVQKGMEVYGNEYAMHFPWH 424
Query: 67 EMP 69
P
Sbjct: 425 RWP 427
>TIGR_CMR|SPO_0635 [details] [associations]
symbol:SPO_0635 "aminomethyl transferase family protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004047
"aminomethyltransferase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR006076
InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571 GO:GO:0005737
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0016491 GO:GO:0004047
GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669 HOGENOM:HOG000251716
ProtClustDB:CLSK863205 RefSeq:YP_165890.1 ProteinModelPortal:Q5LVR5
GeneID:3195325 KEGG:sil:SPO0635 PATRIC:23374535 OMA:DEYMLYA
Uniprot:Q5LVR5
Length = 835
Score = 188 (71.2 bits), Expect = 2.8e-14, Sum P(2) = 2.8e-14
Identities = 62/247 (25%), Positives = 120/247 (48%)
Query: 72 TFFKPKFFDFMEEEYRACFEGVGIIDMSSFSKIKITCSDES-LVDWLQQLCSNDVNIP-V 129
+F + ++ + EE +A GVG+ID ++F+K + + +DW C+ +P V
Sbjct: 479 SFRRGGWWQYAVEEAKAIRNGVGLIDATAFTKHVVKGPGATQFLDWFT--CNK---LPKV 533
Query: 130 GGISHTGMQNERGGYENDCILVRETETSYFMVSPTSQQTRVFEWMKNHLPTKH----YIT 185
G I+ T G + +VR E +Y++VS + ++++ K YI
Sbjct: 534 GRINLTYALTSAGTTRTEYTIVRNGENNYYIVSAGAWTEYDADFLRKAAEDKMEEFGYIE 593
Query: 186 LSDVTSKYTVINVVGPKAKQLLSEL---CDEDINLH----PF-SYKRTDIGYASDVKLMG 237
+ DVT+++ V + GPK++ +L E+ D + L P+ S ++ ++G V +
Sbjct: 594 IQDVTTQWGVFAIAGPKSRDVLKEVIKDADPETALSNKRFPWLSARQIELGMCP-VNAIR 652
Query: 238 FTHTGEPGYCLYIPSEYALHVYQKIMTLGKDYNARDVGMFTQRYMRIEKFIPFWAEDLNS 297
+TGE G+ L+ P E +++ ++ G+ + + VG Q ++R EK + +L
Sbjct: 653 VAYTGELGWELHHPIEMQRYLWDLLLAAGEKHGMKLVGARAQNWLRQEKSYRAFGTELGR 712
Query: 298 VTTPFES 304
TP E+
Sbjct: 713 DATPLEA 719
Score = 65 (27.9 bits), Expect = 2.8e-14, Sum P(2) = 2.8e-14
Identities = 16/62 (25%), Positives = 28/62 (45%)
Query: 6 LQGAGGIGRAVAEWMTHGEATQELLSFDVQRFLDLHNNRQYLQQRIREVVGSTYRVGDPR 65
+ AGG G +A+ M GEA ++ S D +R+ ++ ++ E Y + P
Sbjct: 368 ITAAGGTGYYLAQMMVDGEAEIDMASLDPKRYSSNWMTTEFAARKNEECYSHVYILHHPD 427
Query: 66 PE 67
E
Sbjct: 428 EE 429
>UNIPROTKB|D4A9I9 [details] [associations]
symbol:Sardh "Sarcosine dehydrogenase, mitochondrial"
species:10116 "Rattus norvegicus" [GO:0004047
"aminomethyltransferase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006546 "glycine catabolic process"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
InterPro:IPR006076 InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571
GO:GO:0005737 GO:GO:0016491 GO:GO:0004047 GO:GO:0006546
InterPro:IPR013977 Pfam:PF08669 IPI:IPI00557713
ProteinModelPortal:D4A9I9 Ensembl:ENSRNOT00000043905
ArrayExpress:D4A9I9 Uniprot:D4A9I9
Length = 920
Score = 207 (77.9 bits), Expect = 5.3e-14, P = 5.3e-14
Identities = 66/258 (25%), Positives = 115/258 (44%)
Query: 72 TFFKPKFFDFMEEEYRACFEGVGIIDMSSFSKIKITCSD-ESLVDWLQQLCSNDVNIPVG 130
TF+ ++++E AC + +MS F K + +D DWL S DVN P G
Sbjct: 549 TFYTLCHHTWIQKECLACRTAAAVFNMSYFGKFYLLGADARKAADWL---FSADVNRPPG 605
Query: 131 GISHTGMQNERGGYEND----CI--------LVRETE-TSYFMVSPTSQQTRVFEWMKNH 177
+T M N+RGG E+D C+ L E Y++ + + +
Sbjct: 606 STVYTCMLNQRGGTESDLTVSCLAPGAQASPLAPAFEGDGYYLAVGGAVAQHNWSHINTV 665
Query: 178 LPTKHY-ITLSDVTSKYTVINVVGPKAKQLLSELCDEDINLHPFSYKRTDIGYASD--VK 234
L + + L D + ++++ GP ++ +L ++ D D++ F + + A+ V+
Sbjct: 666 LQDQEFRCQLMDCSEDLGMLSIQGPASRDILQDVLDADLSNEAFPFSTHQLVRAAGHLVR 725
Query: 235 LMGFTHTGEPGYCLYIPSEYALHVYQKIMTLGKDYNARDVGMFTQRYMRIEKFIPFWAED 294
+ + GE G+ L++P L VY+ +M G + + G + IEK W D
Sbjct: 726 AIRLSFVGELGWELHVPQASCLPVYRAVMAAGAKHGLVNAGYRAIDSLSIEKGYRHWHAD 785
Query: 295 LNSVTTPFESGSAYRVKL 312
L S +P E+G A+ KL
Sbjct: 786 LRSDDSPLEAGLAFTCKL 803
>UNIPROTKB|Q4K4P9 [details] [associations]
symbol:soxA "Sarcosine oxidase, alpha subunit"
species:220664 "Pseudomonas protegens Pf-5" [GO:0008115 "sarcosine
oxidase activity" evidence=ISS] [GO:0009063 "cellular amino acid
catabolic process" evidence=ISS] InterPro:IPR000103
InterPro:IPR006222 InterPro:IPR006277 InterPro:IPR013027
Pfam:PF01571 PIRSF:PIRSF037980 PRINTS:PR00368 PRINTS:PR00469
GO:GO:0005737 EMBL:CP000076 GenomeReviews:CP000076_GR GO:GO:0009063
eggNOG:COG0446 GO:GO:0046653 GO:GO:0004047 GO:GO:0006546
InterPro:IPR013977 Pfam:PF08669 GO:GO:0008115 HOGENOM:HOG000218134
KO:K00302 OMA:RECKAVR ProtClustDB:CLSK869336 PANTHER:PTHR13847:SF41
TIGRFAMs:TIGR01372 RefSeq:YP_262784.1 ProteinModelPortal:Q4K4P9
STRING:Q4K4P9 GeneID:3480098 KEGG:pfl:PFL_5726 PATRIC:19880953
BioCyc:PFLU220664:GIX8-5766-MONOMER Uniprot:Q4K4P9
Length = 1005
Score = 204 (76.9 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 57/226 (25%), Positives = 107/226 (47%)
Query: 82 MEEEYRACFEGVGIIDMSSFSKIKITCSDESLVDWLQQLCSND-VNIPVGGISHTGMQNE 140
++ E +A + VG++D S+ KI I D ++L ++ +N + VG + M E
Sbjct: 654 VKRECQAVRDSVGLLDASTLGKIDIQGPDAR--EFLNRIYTNAWTKLDVGKARYGLMCKE 711
Query: 141 RGGYENDCILVRETETSYFMVSPTSQQTRVFEWMKNHLPTKH---YITLSDVTSKYTVIN 197
G +D + + + M + T RV +W++ + T+ + + VT + +
Sbjct: 712 DGMVFDDGVTACLADNHFLMTTTTGGAARVLQWLEIYQQTEWPDLKVYFTSVTDHWATMT 771
Query: 198 VVGPKAKQLLSELCDEDINLHPFSYKRTDIGYASDV--KLMGFTHTGEPGYCLYIPSEYA 255
+ GP +++LLSE+ D D++ F + G V ++ + TGE Y + + ++YA
Sbjct: 772 LSGPNSRKLLSEVTDIDLDKDGFPFMTWKEGLVGGVPARVFRISFTGELSYEVNVQADYA 831
Query: 256 LHVYQKIMTLGKDYNARDVGMFTQRYMRIEKFIPFWAEDLNSVTTP 301
+ V ++I+ GK YN G T +R EK +D + TP
Sbjct: 832 MGVLEQIVEAGKKYNLTPYGTETMHVLRAEKGFIIVGQDTDGSMTP 877
Score = 41 (19.5 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 14/46 (30%), Positives = 23/46 (50%)
Query: 53 EVVGSTYRVGDPRPEMPPGTFFK----PKFFDFMEEEYRACFEGVG 94
+++G +VG MPPG ++K P+ F E+Y G+G
Sbjct: 110 DMMGILGKVGGKL--MPPGFYYKTFMYPQSFWMTYEKYIRKAAGLG 153
>TIGR_CMR|CPS_2480 [details] [associations]
symbol:CPS_2480 "sarcosine oxidase, alpha subunit"
species:167879 "Colwellia psychrerythraea 34H" [GO:0008115
"sarcosine oxidase activity" evidence=ISS] InterPro:IPR000103
InterPro:IPR006222 InterPro:IPR006277 InterPro:IPR013027
InterPro:IPR023753 Pfam:PF01571 Pfam:PF07992 PIRSF:PIRSF037980
PRINTS:PR00368 PRINTS:PR00469 GO:GO:0005737 EMBL:CP000083
GenomeReviews:CP000083_GR eggNOG:COG0446 GO:GO:0046653
GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669
GO:GO:0008115 RefSeq:YP_269196.1 RefSeq:YP_270692.1
ProteinModelPortal:Q47WX9 STRING:Q47WX9 GeneID:3521446
GeneID:3522790 KEGG:cps:CPS_2480 KEGG:cps:CPS_4034 PATRIC:21468029
HOGENOM:HOG000218134 KO:K00302 OMA:RECKAVR ProtClustDB:CLSK869336
BioCyc:CPSY167879:GI48-2543-MONOMER
BioCyc:CPSY167879:GI48-4047-MONOMER PANTHER:PTHR13847:SF41
TIGRFAMs:TIGR01372 Uniprot:Q47WX9
Length = 1007
Score = 203 (76.5 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 69/277 (24%), Positives = 123/277 (44%)
Query: 32 FDVQRFLDLHNNRQYLQQRIR-EVVGSTYRVGDPRPEMPPGTFFKPKFFDFMEEEYRACF 90
FD RF +H + +L+ E VG R P PG + +E E A
Sbjct: 614 FDPARFSAMH--KWHLENGAEFEDVGQWKR---PWYFPQPGETMQQS----LERECLATR 664
Query: 91 EGVGIIDMSSFSKIKITCSDESLVDWLQQLCSNDVN-IPVGGISHTGMQNERGGYENDCI 149
VGI+D S+ KI I D ++L ++ +N + + VG + M E G +D +
Sbjct: 665 NSVGILDASTLGKIDIQGKDAR--EFLNRVYTNPWSKLGVGKCRYGVMCKEDGMVFDDGV 722
Query: 150 LVRETETSYFMVSPTSQQTRVFEWMKNHLPTKH---YITLSDVTSKYTVINVVGPKAKQL 206
V + + M + T V +W++ T+ + S VT ++ + + GP ++++
Sbjct: 723 TVCLDDNRFIMTTTTGGAAGVLQWLELWHQTEWPELEVYFSTVTDHWSTMTISGPNSRKV 782
Query: 207 LSELCDEDINLHPFSYKRTDIGYASDVKLMGF--THTGEPGYCLYIPSEYALHVYQKIMT 264
L ++CD D++ F Y + VK F + TGE + + + + Y +H ++ +M
Sbjct: 783 LEKICDIDVSNDSFKYMDWRAATVAGVKARIFRISFTGELSFEINVQANYGMHAWKAVMA 842
Query: 265 LGKDYNARDVGMFTQRYMRIEKFIPFWAEDLNSVTTP 301
G+++N G T +R EK +D + TP
Sbjct: 843 AGEEFNITPYGTETMHILRAEKGFIIVGQDTDGSVTP 879
>TIGR_CMR|CPS_4034 [details] [associations]
symbol:CPS_4034 "sarcosine oxidase, alpha subunit"
species:167879 "Colwellia psychrerythraea 34H" [GO:0008115
"sarcosine oxidase activity" evidence=ISS] InterPro:IPR000103
InterPro:IPR006222 InterPro:IPR006277 InterPro:IPR013027
InterPro:IPR023753 Pfam:PF01571 Pfam:PF07992 PIRSF:PIRSF037980
PRINTS:PR00368 PRINTS:PR00469 GO:GO:0005737 EMBL:CP000083
GenomeReviews:CP000083_GR eggNOG:COG0446 GO:GO:0046653
GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669
GO:GO:0008115 RefSeq:YP_269196.1 RefSeq:YP_270692.1
ProteinModelPortal:Q47WX9 STRING:Q47WX9 GeneID:3521446
GeneID:3522790 KEGG:cps:CPS_2480 KEGG:cps:CPS_4034 PATRIC:21468029
HOGENOM:HOG000218134 KO:K00302 OMA:RECKAVR ProtClustDB:CLSK869336
BioCyc:CPSY167879:GI48-2543-MONOMER
BioCyc:CPSY167879:GI48-4047-MONOMER PANTHER:PTHR13847:SF41
TIGRFAMs:TIGR01372 Uniprot:Q47WX9
Length = 1007
Score = 203 (76.5 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 69/277 (24%), Positives = 123/277 (44%)
Query: 32 FDVQRFLDLHNNRQYLQQRIR-EVVGSTYRVGDPRPEMPPGTFFKPKFFDFMEEEYRACF 90
FD RF +H + +L+ E VG R P PG + +E E A
Sbjct: 614 FDPARFSAMH--KWHLENGAEFEDVGQWKR---PWYFPQPGETMQQS----LERECLATR 664
Query: 91 EGVGIIDMSSFSKIKITCSDESLVDWLQQLCSNDVN-IPVGGISHTGMQNERGGYENDCI 149
VGI+D S+ KI I D ++L ++ +N + + VG + M E G +D +
Sbjct: 665 NSVGILDASTLGKIDIQGKDAR--EFLNRVYTNPWSKLGVGKCRYGVMCKEDGMVFDDGV 722
Query: 150 LVRETETSYFMVSPTSQQTRVFEWMKNHLPTKH---YITLSDVTSKYTVINVVGPKAKQL 206
V + + M + T V +W++ T+ + S VT ++ + + GP ++++
Sbjct: 723 TVCLDDNRFIMTTTTGGAAGVLQWLELWHQTEWPELEVYFSTVTDHWSTMTISGPNSRKV 782
Query: 207 LSELCDEDINLHPFSYKRTDIGYASDVKLMGF--THTGEPGYCLYIPSEYALHVYQKIMT 264
L ++CD D++ F Y + VK F + TGE + + + + Y +H ++ +M
Sbjct: 783 LEKICDIDVSNDSFKYMDWRAATVAGVKARIFRISFTGELSFEINVQANYGMHAWKAVMA 842
Query: 265 LGKDYNARDVGMFTQRYMRIEKFIPFWAEDLNSVTTP 301
G+++N G T +R EK +D + TP
Sbjct: 843 AGEEFNITPYGTETMHILRAEKGFIIVGQDTDGSVTP 879
>TIGR_CMR|CHY_0489 [details] [associations]
symbol:CHY_0489 "glycine cleavage system T protein"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0004047 "aminomethyltransferase activity" evidence=ISS]
[GO:0019464 "glycine decarboxylation via glycine cleavage system"
evidence=ISS] InterPro:IPR006222 InterPro:IPR006223
InterPro:IPR022903 Pfam:PF01571 PIRSF:PIRSF006487 GO:GO:0005737
GO:GO:0008483 EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0004047
GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669 KO:K00605
PANTHER:PTHR13847:SF5 eggNOG:COG0404 HOGENOM:HOG000239380
TIGRFAMs:TIGR00528 HAMAP:MF_00259 RefSeq:YP_359347.1 HSSP:P27248
ProteinModelPortal:Q3AET7 SMR:Q3AET7 STRING:Q3AET7 GeneID:3727042
KEGG:chy:CHY_0489 PATRIC:21274127 OMA:KPAFWGR
BioCyc:CHYD246194:GJCN-490-MONOMER Uniprot:Q3AET7
Length = 360
Score = 194 (73.4 bits), Expect = 3.0e-13, P = 3.0e-13
Identities = 60/250 (24%), Positives = 123/250 (49%)
Query: 68 MPPGTFFKPKFFDFMEEEYRACFEGVGIIDMSSFSKIKITCSD-ESLVDWLQQLCSNDVN 126
+P G + P + + EE+ A VG+ D+S +I+IT E V++L +NDV+
Sbjct: 21 VPFGGWEMPVQYTGILEEHMAVRTDVGMFDVSHMGEIEITGKQAERFVNYL---ITNDVS 77
Query: 127 -IPVGGISHTGMQNERGGYENDCILVRETETSYFMVSPTSQQTRVFEWMKNHLPTKHYIT 185
+ G + +T M GG +D + + + Y +V + + + + + +T
Sbjct: 78 RLNSGDVIYTTMCYPDGGTVDDLLAYKYSTERYLLVVNAANKDKDLAHILQYRWDD--VT 135
Query: 186 LSDVTSKYTVINVVGPKAKQLLSELCDEDIN-LHPFSYKRTDI-GYASDVKLMGFTHTGE 243
++D++ + I + GP+A+++L +L D+N + F + ++ G V G+T GE
Sbjct: 136 VTDLSDETAEIALQGPRAQEILQKLTAFDLNQIKYFGFAEIEVAGVPCLVSRTGYT--GE 193
Query: 244 PGYCLYIPSEYALHVYQKIMTLGKDYNARDVGMFTQRYMRIEKFIPFWAEDLNSVTTPFE 303
G+ +Y A ++ +++ LG + G+ + +R E +P + +L++ TP E
Sbjct: 194 DGFEIYFAPNLATKIWNELLNLG----VKPAGLGARDTLRFEACLPLYGHELSAEITPLE 249
Query: 304 SGSAYRVKLD 313
+G + VK +
Sbjct: 250 AGLGWAVKFN 259
>FB|FBgn0034276 [details] [associations]
symbol:CG6385 species:7227 "Drosophila melanogaster"
[GO:0008480 "sarcosine dehydrogenase activity" evidence=ISS]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0004047
"aminomethyltransferase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006546 "glycine catabolic process"
evidence=IEA] InterPro:IPR006076 InterPro:IPR006222 Pfam:PF01266
Pfam:PF01571 GO:GO:0005737 GO:GO:0016491 GO:GO:0004047
GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669 FlyBase:FBgn0034276
EMBL:BT001625 ProteinModelPortal:Q8IGS5 STRING:Q8IGS5 PRIDE:Q8IGS5
InParanoid:Q8IGS5 Bgee:Q8IGS5 Uniprot:Q8IGS5
Length = 907
Score = 176 (67.0 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 59/248 (23%), Positives = 111/248 (44%)
Query: 77 KFFDFMEEEYRACFEGVGIIDMSSFSKIKITCSD-ESLVDWLQQLCSNDVNIPVGGISHT 135
++ D + E AC + +MS F+K+ + + DWL +N P + +T
Sbjct: 535 EYHDLIGSEALACRNNAVVFNMSYFAKLLLDGPQAQEAADWL--FSANTNRDPSKTV-YT 591
Query: 136 GMQNERGGYENDCILVRETETS------------YFMVSPTSQQTRVFEWMKNHLPTKHY 183
N+ GG E D + R S +++V+ + + + + K +
Sbjct: 592 CALNDAGGVEADVTISRLAPGSGEVYNPKINGQGFYIVAGGASAFYTYSVLLAEIRRKGF 651
Query: 184 -ITLSDVTSKYTVINVVGPKAKQLLSELCDEDINLHPFSYKRTDIGYASDV--KLMGFTH 240
+L D+T++ VI++ GP ++++L L D D++ + T + DV +L+ +
Sbjct: 652 NASLKDLTAELGVISIQGPNSRKILQPLIDCDLSDEHVAPNSTRLAKFGDVGLRLLRVSF 711
Query: 241 TGEPGYCLYIPSEYALHVYQKIMTLGKDYNARDVGMFTQRYMRIEKFIPFWAEDLNSVTT 300
GE GY L++P + VY+ +M G + R+ G + + EK W+ DL T
Sbjct: 712 VGELGYELHVPKKDCAAVYRSLMKAGAGEDLRNAGYRSLYSLSSEKGYHLWSFDLRPDDT 771
Query: 301 PFESGSAY 308
P E+G +
Sbjct: 772 PLEAGLGF 779
Score = 65 (27.9 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 14/59 (23%), Positives = 25/59 (42%)
Query: 2 NGNSLQGAGGIGRAVAEWMTHGEATQELLSFDVQRFLDLHNNR-QYLQQRIREVVGSTY 59
N + GG G A W+ G+ + FD++RF Q+++++ E Y
Sbjct: 390 NSAGMMFGGGCGEQTALWVIQGQPDLPMFGFDLRRFTQEQGKAIQWIREKSHESYVKNY 448
>TIGR_CMR|GSU_0375 [details] [associations]
symbol:GSU_0375 "glycine cleavage system T protein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004047
"aminomethyltransferase activity" evidence=ISS] [GO:0006546
"glycine catabolic process" evidence=ISS] InterPro:IPR006222
InterPro:IPR006223 Pfam:PF01571 PIRSF:PIRSF006487 GO:GO:0005737
GO:GO:0008483 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0004047
GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669 KO:K00605
PANTHER:PTHR13847:SF5 HOGENOM:HOG000239380 TIGRFAMs:TIGR00528
OMA:QRYAMFT RefSeq:NP_951434.1 ProteinModelPortal:Q74G72
GeneID:2685714 KEGG:gsu:GSU0375 PATRIC:22023494
ProtClustDB:CLSK924396 BioCyc:GSUL243231:GH27-391-MONOMER
Uniprot:Q74G72
Length = 362
Score = 184 (69.8 bits), Expect = 5.0e-12, P = 5.0e-12
Identities = 59/247 (23%), Positives = 117/247 (47%)
Query: 69 PPGTFFKPKFFDFMEEEYRACFEGVGIIDMSSFSKIKITCSDESLVDWLQQLCSNDV-NI 127
P G + P ++ + E+R C E + D+ + T + + D L+ + + V +I
Sbjct: 22 PFGGWNMPIQYEGIIAEHRWCREKASLFDICHMGEFLFT--GDIIADGLEDVFTFSVASI 79
Query: 128 PVGGISHTGMQNERGGYENDCILVRETETSYFMVSPTSQQTRVFEWMKNHLPTKHYITLS 187
PVG + + N GG +D I+ R + +V + + F + L + +S
Sbjct: 80 PVGRSRYGFLLNGDGGIMDDLIVFRLAQNEAMVVVNAATIGKDFAAISARLGGGGFQDIS 139
Query: 188 DVTSKYTVINVVGPKAKQLLSELCDEDINLHP-FSYKRTDIGYASDVKLMGFTHTGEPGY 246
T+K +++ GP ++++L E+ +I P F + RT + +D + +TGE GY
Sbjct: 140 AATAK---LDLQGPLSREVLVEVIGPEIAAIPYFKFIRTKV-LGADAIVSRTGYTGELGY 195
Query: 247 CLYIPSEYALHVYQKIMTLGKDYNARDVGMFTQRYMRIEKFIPFWAEDLNSVTTPFESGS 306
+++PS+ + ++Q+++ D R G+ + +R+E + D++ TTP E+G
Sbjct: 196 EIFLPSDRVVELWQRLLA---DPRVRPAGLGARDVLRLEVGYSLYGSDIDESTTPLEAGL 252
Query: 307 AYRVKLD 313
V D
Sbjct: 253 ESFVSFD 259
>CGD|CAL0006098 [details] [associations]
symbol:GCV1 species:5476 "Candida albicans" [GO:0004375
"glycine dehydrogenase (decarboxylating) activity"
evidence=IEA;NAS] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0006730 "one-carbon metabolic process" evidence=IEA]
[GO:0006544 "glycine metabolic process" evidence=IEA]
InterPro:IPR006222 InterPro:IPR006223 Pfam:PF01571
PIRSF:PIRSF006487 GO:GO:0005737 GO:GO:0008483 EMBL:AACQ01000034
GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669
GO:GO:0004375 PANTHER:PTHR13847:SF5 eggNOG:COG0404
TIGRFAMs:TIGR00528 RefSeq:XP_719084.1 STRING:Q5AC31 GeneID:3639172
KEGG:cal:CaO19.5519 Uniprot:Q5AC31
Length = 394
Score = 179 (68.1 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 59/229 (25%), Positives = 115/229 (50%)
Query: 93 VGIIDMSSFSKIKITCSD-ESLVDWLQQLCSNDVN-IPVGGISHTGMQNERGGYENDCIL 150
VG+ D+S + I+ D +SL LQ++ D++ +PV S + + N GG +DCI+
Sbjct: 60 VGLFDVSHMLQHNISGKDAQSL---LQKITPIDLSKLPVNTSSLSVLLNNNGGVIDDCII 116
Query: 151 VRETETSYFMVSPTSQQTRVFEWMKNHLPTKHYITLSDVTSKYTVINVVGPKAKQLLSEL 210
+ E Y+MV+ + + +++K+ + +++ T + T++ + GPKA+++L +
Sbjct: 117 TKHGEDEYYMVTNAGCREKDVKFIKDE--ASQFNSVNHNTFEGTLLAIQGPKAQEILQQF 174
Query: 211 CDEDINLHPFSY----KRTDIGYASDVKLMGFTHTGEPGYCLYIPS---EYALHVYQKIM 263
+ED++ F K + IG + V L +TGE G+ L IPS E +
Sbjct: 175 TNEDLSKIYFGQTKFLKLSPIG--ATVYLARSGYTGEDGFELSIPSTTPEESKQALDFFY 232
Query: 264 TLGKDYN--ARDVGMFTQRYMRIEKFIPFWAEDLNSVTTPFESGSAYRV 310
TL +Y + +G+ + +R+E + + +L TP E+ + +
Sbjct: 233 TLINEYPDVVKPIGLAARDSLRLEAGMCLYGHELTEEITPIEASLTWLI 281
>UNIPROTKB|Q5AC31 [details] [associations]
symbol:GCV1 "Aminomethyltransferase" species:237561
"Candida albicans SC5314" [GO:0004375 "glycine dehydrogenase
(decarboxylating) activity" evidence=NAS] InterPro:IPR006222
InterPro:IPR006223 Pfam:PF01571 PIRSF:PIRSF006487 GO:GO:0005737
GO:GO:0008483 EMBL:AACQ01000034 GO:GO:0004047 GO:GO:0006546
InterPro:IPR013977 Pfam:PF08669 GO:GO:0004375 PANTHER:PTHR13847:SF5
eggNOG:COG0404 TIGRFAMs:TIGR00528 RefSeq:XP_719084.1 STRING:Q5AC31
GeneID:3639172 KEGG:cal:CaO19.5519 Uniprot:Q5AC31
Length = 394
Score = 179 (68.1 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 59/229 (25%), Positives = 115/229 (50%)
Query: 93 VGIIDMSSFSKIKITCSD-ESLVDWLQQLCSNDVN-IPVGGISHTGMQNERGGYENDCIL 150
VG+ D+S + I+ D +SL LQ++ D++ +PV S + + N GG +DCI+
Sbjct: 60 VGLFDVSHMLQHNISGKDAQSL---LQKITPIDLSKLPVNTSSLSVLLNNNGGVIDDCII 116
Query: 151 VRETETSYFMVSPTSQQTRVFEWMKNHLPTKHYITLSDVTSKYTVINVVGPKAKQLLSEL 210
+ E Y+MV+ + + +++K+ + +++ T + T++ + GPKA+++L +
Sbjct: 117 TKHGEDEYYMVTNAGCREKDVKFIKDE--ASQFNSVNHNTFEGTLLAIQGPKAQEILQQF 174
Query: 211 CDEDINLHPFSY----KRTDIGYASDVKLMGFTHTGEPGYCLYIPS---EYALHVYQKIM 263
+ED++ F K + IG + V L +TGE G+ L IPS E +
Sbjct: 175 TNEDLSKIYFGQTKFLKLSPIG--ATVYLARSGYTGEDGFELSIPSTTPEESKQALDFFY 232
Query: 264 TLGKDYN--ARDVGMFTQRYMRIEKFIPFWAEDLNSVTTPFESGSAYRV 310
TL +Y + +G+ + +R+E + + +L TP E+ + +
Sbjct: 233 TLINEYPDVVKPIGLAARDSLRLEAGMCLYGHELTEEITPIEASLTWLI 281
>TIGR_CMR|SPO_1562 [details] [associations]
symbol:SPO_1562 "glycine cleavage system T protein,
putative" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004047
"aminomethyltransferase activity" evidence=ISS] [GO:0019464
"glycine decarboxylation via glycine cleavage system" evidence=ISS]
InterPro:IPR006222 InterPro:IPR006223 Pfam:PF01571
PIRSF:PIRSF006487 GO:GO:0005737 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0004047 GO:GO:0006546
InterPro:IPR013977 Pfam:PF08669 KO:K00605 HOGENOM:HOG000239381
RefSeq:YP_166803.1 ProteinModelPortal:Q5LT52 GeneID:3192949
KEGG:sil:SPO1562 PATRIC:23376443 OMA:SIDELEW ProtClustDB:CLSK864700
Uniprot:Q5LT52
Length = 381
Score = 178 (67.7 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 63/241 (26%), Positives = 110/241 (45%)
Query: 84 EEYRACFEGVGIIDMSSFSKIKITCSD-ESLVDWLQQLCSNDVNIPVGGISHTGMQNERG 142
EEY AC E ++D+S+ K +IT D E+L ++ N +PVGG+ +T M G
Sbjct: 37 EEYHACREKCVVLDLSALRKFEITGPDSEALCQYI--FTRNMKTLPVGGVVYTAMCYPHG 94
Query: 143 GYENDCILVRETETSYFMVSPTSQQTRVFEWMKNHLPTKHY-ITLSDVTSKYTVINVVGP 201
G +D + R + ++ + + EW++ + + T I V GP
Sbjct: 95 GMIDDGTVFRLGKDNFRWIGGSDYGG---EWIREKAAELGLKVLVRSSTDMQHNIAVQGP 151
Query: 202 KAKQLLSELC--------DEDINLHPFSYKRT--DIGYASDVKLMGFTHTGEPGYCLYIP 251
++++LL ++ E++ F+ R D G V G+T GE GY ++
Sbjct: 152 ESRELLKKVIWTAPHQPKFEELGWFRFAPARIGDDQGVPVVVSRTGYT--GELGYEIFCH 209
Query: 252 SEYALHVYQKIMTLGKDYNARDVGMFTQRYMRIEKFIPFWAEDLNSVTTPFESGSAYRVK 311
++A V+ + G+ + R +G+ +RIE + F D + T PFE+G + V
Sbjct: 210 PKHAGAVFDAVWEAGQAHGIRPMGLEALDMVRIEAGLIFAGYDFSDQTDPFEAGIGFTVP 269
Query: 312 L 312
L
Sbjct: 270 L 270
>UNIPROTKB|Q5SYV2 [details] [associations]
symbol:SARDH "Sarcosine dehydrogenase, mitochondrial"
species:9606 "Homo sapiens" [GO:0004047 "aminomethyltransferase
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006546 "glycine catabolic process" evidence=IEA]
InterPro:IPR006222 Pfam:PF01571 GO:GO:0005737 GO:GO:0004047
GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669 EMBL:AL365494
EMBL:AL590710 HGNC:HGNC:10536 HOVERGEN:HBG002326 IPI:IPI00514525
SMR:Q5SYV2 Ensembl:ENST00000371868 UCSC:uc004cen.3 Uniprot:Q5SYV2
Length = 368
Score = 177 (67.4 bits), Expect = 3.6e-11, P = 3.6e-11
Identities = 63/232 (27%), Positives = 101/232 (43%)
Query: 98 MSSFSKIKITCSD-ESLVDWLQQLCSNDVNIPVGGISHTGMQNERGGYENDCILVRETET 156
MS F K + D DWL S DV+ P G +T M N RGG E+D + R +
Sbjct: 1 MSYFGKFYLVGLDARKAADWL---FSADVSRPPGSTVYTCMLNHRGGTESDLTVSRLAPS 57
Query: 157 SYFM-VSPTSQQTRVFEWMK--------NHLPT-----KHYITLSDVTSKYTVINVVGPK 202
++P + + M +H+ T K L D + +I++ GP
Sbjct: 58 HQASPLAPAFEGDGYYLAMGGAVAQHNWSHITTVLQDQKSQCQLIDSSEDLGMISIQGPA 117
Query: 203 AKQLLSELCDEDINLHPFSYKRTDIGYASD--VKLMGFTHTGEPGYCLYIPSEYALHVYQ 260
++ +L E+ D D++ F + + A+ V+ M + GE G+ L+IP + VY+
Sbjct: 118 SRAILQEVLDADLSNEAFPFSTHKLLRAAGHLVRAMRLSFVGELGWELHIPKASCVPVYR 177
Query: 261 KIMTLGKDYNARDVGMFTQRYMRIEKFIPFWAEDLNSVTTPFESGSAYRVKL 312
+M G + + G + IEK W DL +P E+G A+ KL
Sbjct: 178 AVMAAGAKHGLINAGYRAIDSLSIEKGYRHWHADLRPDDSPLEAGLAFTCKL 229
>ASPGD|ASPL0000076695 [details] [associations]
symbol:AN8654 species:162425 "Emericella nidulans"
[GO:0004047 "aminomethyltransferase activity" evidence=RCA]
[GO:0006520 "cellular amino acid metabolic process" evidence=RCA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0006546 "glycine
catabolic process" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] InterPro:IPR006076 InterPro:IPR006222
Pfam:PF01266 Pfam:PF01571 GO:GO:0005737 GO:GO:0016491 EMBL:BN001303
EMBL:AACD01000158 GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977
Pfam:PF08669 eggNOG:COG0665 HOGENOM:HOG000251716 RefSeq:XP_681923.1
ProteinModelPortal:Q5ASS6 SMR:Q5ASS6 STRING:Q5ASS6
EnsemblFungi:CADANIAT00006391 GeneID:2868571 KEGG:ani:AN8654.2
OMA:RRSPIHE OrthoDB:EOG4G4KZH Uniprot:Q5ASS6
Length = 948
Score = 156 (60.0 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 58/222 (26%), Positives = 98/222 (44%)
Query: 93 VGIIDMSSFSKIKITCSDESLVDWLQQLCSNDVNIPVGGISHTGMQNERGGYENDCILVR 152
V + DMSSF + + S V LQ L + DV++ G I + + NE GG +D + R
Sbjct: 593 VAMYDMSSFHRFIV--SGPGAVALLQGLGTVDVDVRPGTIVYALLLNENGGIYSDVFVTR 650
Query: 153 ETETSYFMVSPTSQQ----TRVFEWMKNHLPTKHYITLSDVTSKYTVINVVGPKAKQLLS 208
+Y + + T+ R + P ++ + DVT I + GP+A +L
Sbjct: 651 LGSFTYQIGANTATDLAYLARKARYQTQKSPAD-WVHVEDVTGGTCAIGLWGPRAADVLH 709
Query: 209 ELC---DEDINLHPFSYKRTD-IGYAS-DVKLMGFTHTGEPGYCLYIPSEYALHVYQKIM 263
L + DI+ Y R + AS V L ++ GE G+ + +E+ +++ I
Sbjct: 710 SLPLPRETDISNKSLPYMRAKAVTIASIPVTLFRKSYVGEYGWEIQTSAEHGARLWEAIF 769
Query: 264 TLGKDYNARDVGMFTQRYMRIEKFIPFWAEDLNSVTTPFESG 305
GK + G +RIEK + D+ + P+E+G
Sbjct: 770 NAGKRHGLIAAGRAAFNALRIEKGYRTYGVDMTTEHDPYEAG 811
Score = 69 (29.3 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 16/63 (25%), Positives = 34/63 (53%)
Query: 9 AGGIGRAVAEWMTHGEATQELLSFDVQRFLDLHNNRQYLQQRIREVVGSTYRVGDP-RPE 67
+ G+ RA+AE +T G ++ ++ ++ RF + NR Y+++ ++ Y + P +P
Sbjct: 458 SAGVARAMAEILTRGWSSIDVSECELSRFERVQLNRSYVEETSQQNFVEIYDIIHPLQPR 517
Query: 68 MPP 70
P
Sbjct: 518 ESP 520
>TIGR_CMR|CPS_1274 [details] [associations]
symbol:CPS_1274 "glycine cleavage system T protein"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004047
"aminomethyltransferase activity" evidence=ISS] [GO:0019464
"glycine decarboxylation via glycine cleavage system" evidence=ISS]
InterPro:IPR006222 InterPro:IPR006223 InterPro:IPR022903
Pfam:PF01571 PIRSF:PIRSF006487 GO:GO:0005737 GO:GO:0008483
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0004047 GO:GO:0006546
InterPro:IPR013977 Pfam:PF08669 KO:K00605 PANTHER:PTHR13847:SF5
eggNOG:COG0404 TIGRFAMs:TIGR00528 HOGENOM:HOG000239381
ProtClustDB:PRK00389 HAMAP:MF_00259 HSSP:P27248 RefSeq:YP_268017.1
ProteinModelPortal:Q486J8 SMR:Q486J8 STRING:Q486J8 GeneID:3522650
KEGG:cps:CPS_1274 PATRIC:21465783 OMA:WSIAWEP
BioCyc:CPSY167879:GI48-1355-MONOMER Uniprot:Q486J8
Length = 362
Score = 170 (64.9 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 54/230 (23%), Positives = 111/230 (48%)
Query: 84 EEYRACFEGVGIIDMSSFSKIKITCSDESLVDWLQQLCSNDV-NIPVGGIS-HTGMQNER 141
EE+ A G+ D+S + + + +D +L++L NDV + G + +TGM NE
Sbjct: 35 EEHHAVRTDAGMFDVSHMTIVDVQGADAKA--FLRRLVINDVAKLATPGKALYTGMLNEE 92
Query: 142 GGYENDCILVRETETSYFMVSPTSQQTRVFEWMKNHLPTKHYITLSDVTSKYTVINVVGP 201
GG +D I+ ++T Y +V ++ + + WM T IT+++ ++ ++ V GP
Sbjct: 93 GGVIDDLIIYFFSDTDYRLVVNSATRVKDLAWMTKQ-STGFDITITE-RPEFGMLAVQGP 150
Query: 202 KAKQLLSELCDEDINLHPFSYKRTDIGY-ASDVKLMGFTHTGEPGYCLYIPSEYALHVYQ 260
+AK +++L + + + G D+ + +TGE GY + +P+ A +Q
Sbjct: 151 EAKAKVAKLLTAE-QIEAVEGMKPFFGVQVGDLFIATTGYTGEDGYEIIVPNNSAEDFWQ 209
Query: 261 KIMTLGKDYNARDVGMFTQRYMRIEKFIPFWAEDLNSVTTPFESGSAYRV 310
K++ D G+ + +R+E + + D++ +P + A+ +
Sbjct: 210 KLL----DEGVVPCGLGARDTLRLEAGMNLYGLDMDETVSPLAANMAWTI 255
>TIGR_CMR|SPO_2345 [details] [associations]
symbol:SPO_2345 "sarcosine oxidase, alpha subunit family"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0016647
"oxidoreductase activity, acting on the CH-NH group of donors,
oxygen as acceptor" evidence=ISS] InterPro:IPR000103
InterPro:IPR006222 InterPro:IPR006277 InterPro:IPR013027
Pfam:PF01571 PIRSF:PIRSF037980 PRINTS:PR00368 PRINTS:PR00469
GO:GO:0005737 EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0046653
GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669
GO:GO:0008115 HOGENOM:HOG000218134 KO:K00302 PANTHER:PTHR13847:SF41
TIGRFAMs:TIGR01372 RefSeq:YP_167568.1 ProteinModelPortal:Q5LQY7
GeneID:3193813 KEGG:sil:SPO2345 PATRIC:23378057 OMA:RYGLALW
ProtClustDB:CLSK836134 Uniprot:Q5LQY7
Length = 1010
Score = 166 (63.5 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 57/250 (22%), Positives = 112/250 (44%)
Query: 70 PGTFFKP--KFFDFMEEEYRACFEGVGIIDMSSFSKIKITCSDESLVDWLQQLCSNDVNI 127
P + +P D + E + E +G++D S+ K+ + D +L L +N ++
Sbjct: 641 PFAYVRPGESVHDAVNREVKNTRENLGLLDASTLGKLIVKGPDAG--KFLDMLYTNMMST 698
Query: 128 PVGGISHTGMQ-NERGGYENDCILVRETETSYFMVSPTSQQTRVFEWMKNHLPTKHY--- 183
G G+ +E G +D ++ R E ++ + T R+ M+ L T+ +
Sbjct: 699 LKPGKCRYGLMCSENGFLIDDGVVARIDEDTFLCHTTTGGAERIHGHMEEWLQTEWWDWK 758
Query: 184 ITLSDVTSKYTVINVVGPKAKQLLSEL-------CDEDINLHPF-SYKRTDIGYASDVKL 235
+ +++VT +Y I VVGPKA+++L +L D + PF ++ IG D +
Sbjct: 759 VYVANVTEQYAQIAVVGPKARKVLEKLNAKAGGGMDLSVEALPFMEWRDGRIG-EFDARA 817
Query: 236 MGFTHTGEPGYCLYIPSEYALHVYQKIMTLGKDYNARDVGMFTQRYMRIEKFIPFWAEDL 295
+ +GE Y + +P+ L ++ ++ GK++ G T +R EK ++
Sbjct: 818 YRISFSGELSYEIAVPASQGLAFWEALVDAGKEFGVMPYGTETLHILRAEKGFIMIGDET 877
Query: 296 NSVTTPFESG 305
+ P + G
Sbjct: 878 DGTVIPQDLG 887
>TIGR_CMR|CBU_1716 [details] [associations]
symbol:CBU_1716 "glycine cleavage system T protein"
species:227377 "Coxiella burnetii RSA 493" [GO:0004047
"aminomethyltransferase activity" evidence=ISS] [GO:0006546
"glycine catabolic process" evidence=ISS] [GO:0019464 "glycine
decarboxylation via glycine cleavage system" evidence=ISS]
InterPro:IPR006222 InterPro:IPR006223 InterPro:IPR022903
Pfam:PF01571 PIRSF:PIRSF006487 GO:GO:0005737 GO:GO:0008483
EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0004047 GO:GO:0006546
InterPro:IPR013977 Pfam:PF08669 KO:K00605 PANTHER:PTHR13847:SF5
eggNOG:COG0404 OMA:KALYGGM TIGRFAMs:TIGR00528 HOGENOM:HOG000239381
ProtClustDB:PRK00389 HAMAP:MF_00259 RefSeq:NP_820697.2
ProteinModelPortal:Q83B06 SMR:Q83B06 PRIDE:Q83B06 GeneID:1209627
KEGG:cbu:CBU_1716 PATRIC:17932163
BioCyc:CBUR227377:GJ7S-1688-MONOMER Uniprot:Q83B06
Length = 363
Score = 154 (59.3 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 55/242 (22%), Positives = 108/242 (44%)
Query: 76 PKFFDFMEEEYRACFEGVGIIDMSSFSKIKITCSDESLVDWLQQLCSNDVN--IPVGGIS 133
P + EE+ + GI D+S I + E +L+ L +NDV VG
Sbjct: 27 PLHYGSQIEEHHQVRQRAGIFDVSHMGVIDL--EGEEATAFLRYLLANDVAKLSDVGRAL 84
Query: 134 HTGMQNERGGYENDCILVRETETSYFMVSPTSQQTRVFEWMKNHLPTKHYITLSDVTSKY 193
+T M N +GG +D I+ R T Y +V + + + W+K + +++S+ +
Sbjct: 85 YTCMLNPQGGVIDDLIVYRVAPTGYRLVVNAATRDKDIAWIKEK-GAGYKVSISE-RPEM 142
Query: 194 TVINVVGPKAKQLLSELCDEDIN-----LHPFSYKRTDIGYASDVKLMGFTHTGEPGYCL 248
++ V GP+A + DE + L PF + + D+++ +TGE G +
Sbjct: 143 CILAVQGPQAIAAAKSIFDEALYAQLEALKPFHFISSP---TRDLQIARTGYTGEDGLEI 199
Query: 249 YIPSEYALHVYQKIMTLGKDYNARDVGMFTQRYMRIEKFIPFWAEDLNSVTTPFESGSAY 308
+P+ A ++ + + G + G+ + +R+E + + D++ T+P S ++
Sbjct: 200 IVPASRATDLWARFVHQG----VKPCGLGARDTLRLEAGLNLYGTDMDETTSPLISNLSW 255
Query: 309 RV 310
V
Sbjct: 256 TV 257
>TIGR_CMR|SPO_1746 [details] [associations]
symbol:SPO_1746 "sarcosine oxidase, alpha subunit family"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0016647
"oxidoreductase activity, acting on the CH-NH group of donors,
oxygen as acceptor" evidence=ISS] InterPro:IPR000103
InterPro:IPR006222 InterPro:IPR006277 InterPro:IPR013027
Pfam:PF01571 PRINTS:PR00368 PRINTS:PR00469 GO:GO:0005737
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0046653 GO:GO:0004047
GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669 GO:GO:0008115
HOGENOM:HOG000218134 KO:K00302 PANTHER:PTHR13847:SF41
TIGRFAMs:TIGR01372 RefSeq:YP_166984.1 ProteinModelPortal:Q5LSM1
GeneID:3193191 KEGG:sil:SPO1746 PATRIC:23376815 OMA:YGMEALN
ProtClustDB:CLSK2463880 Uniprot:Q5LSM1
Length = 977
Score = 156 (60.0 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 59/255 (23%), Positives = 114/255 (44%)
Query: 66 PEMPPGTFFKPKFF------DFMEE---EYRACFEGVGIIDMSSFSKIKITCSDES-LVD 115
P + G +++P +F D+ + E VG+ D+S+ KI I +D + L+D
Sbjct: 603 PMIEAGLWYRPSYFPQPGETDWQQSCDREVGYVRNAVGVADVSTLGKIDIQGTDAARLLD 662
Query: 116 WLQQLCSNDVNIPVGGISHTGMQNERGGYENDCILVRETETSYFMVSPTSQQTRVF---E 172
++ + + VG + + M E G +D R E Y M + T+ +V E
Sbjct: 663 FVYTNMFS--TLKVGRVRYGLMLREDGHVMDDGTTARLGEDHYLMTTTTAAAGQVMAHLE 720
Query: 173 WMKNHLPTKHYITLSDVTSKYTVINVVGPKAKQLLSELCDEDINLHPFSYKRTDIGYASD 232
++ L + +++ VT ++ V GP+A+++L+ L D I+ + +
Sbjct: 721 FVAQGLHPEWDVSICSVTEQWAQFAVAGPRAREVLNGLLDTPIDAAGWPFMSCGAVSVLG 780
Query: 233 V--KLMGFTHTGEPGYCLYIPSEYALHVYQKIMTLGKDYNARDVGMFTQRYMRIEKFIPF 290
V +L + +GE GY + +P+ Y ++ ++T + GM +RIEK
Sbjct: 781 VGGRLFRISFSGEEGYEIAVPARYGASLFDLLVTRVEALGGGAYGMEALNVLRIEKGFIT 840
Query: 291 WAEDLNSVTTPFESG 305
AE ++ T ++ G
Sbjct: 841 HAE-IHGRVTAYDIG 854
>TIGR_CMR|CPS_3841 [details] [associations]
symbol:CPS_3841 "glycine cleavage system T protein"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004047
"aminomethyltransferase activity" evidence=ISS] [GO:0019464
"glycine decarboxylation via glycine cleavage system" evidence=ISS]
InterPro:IPR006222 InterPro:IPR006223 Pfam:PF01571
PIRSF:PIRSF006487 GO:GO:0005737 GO:GO:0008483 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0004047 GO:GO:0006546
InterPro:IPR013977 Pfam:PF08669 KO:K00605 PANTHER:PTHR13847:SF5
eggNOG:COG0404 HOGENOM:HOG000239380 TIGRFAMs:TIGR00528
RefSeq:YP_270503.1 ProteinModelPortal:Q47XG7 STRING:Q47XG7
GeneID:3518894 KEGG:cps:CPS_3841 PATRIC:21470589 OMA:QRYAMFT
ProtClustDB:CLSK910129 BioCyc:CPSY167879:GI48-3858-MONOMER
Uniprot:Q47XG7
Length = 375
Score = 147 (56.8 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 49/219 (22%), Positives = 105/219 (47%)
Query: 94 GIIDMSSFSKIKITCSDESLVDWLQQLCSNDV-NIPVGGISHTGMQNERGGYENDCILVR 152
G+ D+S ++K+ + + L+ L D+ ++P G + N++GG +D ++V
Sbjct: 52 GLFDVSHMGQLKLVGKNAAAA--LETLVPVDIIDLPQGKQRYALFTNDQGGLLDD-LMVS 108
Query: 153 ETETSYFMVSPTSQQTRVFEWMKNHLPTKHYITLSDVTSKYTVINVVGPKAKQLLSELCD 212
F+V + + + M+ HLP I ++ ++ + GPKA ++L L
Sbjct: 109 NFGDHLFVVVNAACKAQDIAHMQKHLPADVEI---EILEGRALLALQGPKAGEVLKRLLP 165
Query: 213 EDINLHPFSYKRTDIGYASDVKLMGFT-HTGEPGYCLYIPSEYALHVYQKIMTLGKDYNA 271
E ++ F R + +A ++G +TGE G+ + IP E+A + ++M ++
Sbjct: 166 ESADM-VFMDSRV-VDFAGAQCIIGRAGYTGEDGFEISIPGEHAERI-TRLMLAEEEIEW 222
Query: 272 RDVGMFTQRYMRIEKFIPFWAEDLNSVTTPFESGSAYRV 310
+G+ + +R+E + + D++ TTP E+ + +
Sbjct: 223 --IGLGARDSLRLESGLCLYGHDIDQTTTPVEASLLWAI 259
>UNIPROTKB|P49364 [details] [associations]
symbol:GDCST "Aminomethyltransferase, mitochondrial"
species:3888 "Pisum sativum" [GO:0005960 "glycine cleavage complex"
evidence=IDA] InterPro:IPR006222 InterPro:IPR006223 Pfam:PF01571
PIRSF:PIRSF006487 GO:GO:0005739 GO:GO:0008483 GO:GO:0004047
GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669 GO:GO:0005960
PANTHER:PTHR13847:SF5 TIGRFAMs:TIGR00528 EMBL:X74793 EMBL:Z25861
EMBL:AJ222771 PIR:S38370 PIR:S56661 ProteinModelPortal:P49364
SMR:P49364 IntAct:P49364 PRIDE:P49364 Uniprot:P49364
Length = 408
Score = 145 (56.1 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 54/269 (20%), Positives = 119/269 (44%)
Query: 48 QQRIREVVGSTYRVGDPRPEMPPGTFFKP-KFFDFMEEEYRACFEGVGIIDMSSFSKIKI 106
+ +++ V + V +P + P ++ D + + C + + D+S + +
Sbjct: 33 ESELKKTVLYDFHVAHGGKMVPFAGWSMPIQYKDSIMDSTLNCRQNGSLFDVSHMCGLSL 92
Query: 107 TCSDESLVDWLQQLCSNDVNIPVGGISH-TGMQNERGGYENDCILVRETETSYFMVSPTS 165
D +V +L++L DV G T NE+GG +D ++ + T+ ++V
Sbjct: 93 KGKD--VVSFLEKLVIADVAALAHGTGTLTVFTNEKGGAIDDSVITKVTDDHLYLVVNAG 150
Query: 166 QQTRVFEWMKNHLPT---KHYITLSDVTSKYTVINVVGPKAKQLLSELCDEDIN-LHPFS 221
+ + ++ H+ K + + +++ + GP A +L L ED++ L+
Sbjct: 151 CRDKDLAHIEEHMKAFKAKGGDVSWHIHDERSLLALQGPLAAPVLQHLTKEDLSKLYFGE 210
Query: 222 YKRTDIGYASDVKLMGFTHTGEPGYCLYIPSEYALHVYQKIMTLGKDYNARDVGMFTQRY 281
++ DI S L +TGE G+ + +PSE+ + + + ++ + R G+ +
Sbjct: 211 FRVLDIN-GSQCFLTRTGYTGEDGFEISVPSEHGVELAKALLEKSEG-KIRLTGLGARDS 268
Query: 282 MRIEKFIPFWAEDLNSVTTPFESGSAYRV 310
+R+E + + DL TP E+G + +
Sbjct: 269 LRLEAGLCLYGNDLEQHITPIEAGLTWAI 297
>UNIPROTKB|P27248 [details] [associations]
symbol:gcvT species:83333 "Escherichia coli K-12"
[GO:0019464 "glycine decarboxylation via glycine cleavage system"
evidence=ISS] [GO:0004047 "aminomethyltransferase activity"
evidence=IEA;ISS;IDA] [GO:0006546 "glycine catabolic process"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008483
"transaminase activity" evidence=IEA] InterPro:IPR006222
InterPro:IPR006223 InterPro:IPR022903 Pfam:PF01571
PIRSF:PIRSF006487 GO:GO:0005737 GO:GO:0008483 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
EMBL:U28377 GO:GO:0004047 InterPro:IPR013977 Pfam:PF08669
GO:GO:0019464 KO:K00605 PANTHER:PTHR13847:SF5 EMBL:X73958
EMBL:M97263 PDB:3A8I PDB:3A8J PDB:3A8K PDBsum:3A8I PDBsum:3A8J
PDBsum:3A8K eggNOG:COG0404 OMA:KALYGGM TIGRFAMs:TIGR00528
HOGENOM:HOG000239381 ProtClustDB:PRK00389 HAMAP:MF_00259 PIR:A56689
RefSeq:NP_417381.1 RefSeq:YP_491106.1 PDB:1VLO PDBsum:1VLO
ProteinModelPortal:P27248 SMR:P27248 IntAct:P27248 PaxDb:P27248
PRIDE:P27248 EnsemblBacteria:EBESCT00000001707
EnsemblBacteria:EBESCT00000016229 GeneID:12933349 GeneID:947390
KEGG:ecj:Y75_p2837 KEGG:eco:b2905 PATRIC:32121224 EchoBASE:EB1412
EcoGene:EG11442 BioCyc:EcoCyc:GCVT-MONOMER
BioCyc:ECOL316407:JW2873-MONOMER BioCyc:MetaCyc:GCVT-MONOMER
EvolutionaryTrace:P27248 Genevestigator:P27248 Uniprot:P27248
Length = 364
Score = 142 (55.0 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 53/239 (22%), Positives = 109/239 (45%)
Query: 76 PKFFDFMEEEYRACFEGVGIIDMSSFSKIKITCSDESLVDWLQQLCSNDV-NIPVGGIS- 133
P + +E+ A G+ D+S + + + S ++L+ L +NDV + G +
Sbjct: 27 PLHYGSQIDEHHAVRTDAGMFDVSHMTIVDLRGSRTR--EFLRYLLANDVAKLTKSGKAL 84
Query: 134 HTGMQNERGGYENDCILVRETETSYFMVSPTSQQTRVFEWMKNHL-PTKHYITLSDVTSK 192
++GM N GG +D I+ TE + +V ++ + + W+ H P IT+ D S
Sbjct: 85 YSGMLNASGGVIDDLIVYYFTEDFFRLVVNSATREKDLSWITQHAEPFGIEITVRDDLS- 143
Query: 193 YTVINVVGPKAKQLLSELCDEDINLHPFSYKRTDIGY-ASDVKLMGFTHTGEPGYCLYIP 251
+I V GP A+ + L + D + G A D+ + +TGE GY + +P
Sbjct: 144 --MIAVQGPNAQAKAATLFN-DAQRQAVEGMKPFFGVQAGDLFIATTGYTGEAGYEIALP 200
Query: 252 SEYALHVYQKIMTLGKDYNARDVGMFTQRYMRIEKFIPFWAEDLNSVTTPFESGSAYRV 310
+E A ++ ++ G + G+ + +R+E + + ++++ +P + + +
Sbjct: 201 NEKAADFWRALVEAG----VKPCGLGARDTLRLEAGMNLYGQEMDETISPLAANMGWTI 255
>TAIR|locus:2008900 [details] [associations]
symbol:AT1G11860 species:3702 "Arabidopsis thaliana"
[GO:0004047 "aminomethyltransferase activity" evidence=IEA;ISS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0006546 "glycine catabolic process"
evidence=IEA;RCA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0022626 "cytosolic ribosome" evidence=IDA] [GO:0046686
"response to cadmium ion" evidence=IEP;RCA] [GO:0016020 "membrane"
evidence=IDA] [GO:0009507 "chloroplast" evidence=IDA] [GO:0048046
"apoplast" evidence=IDA] [GO:0009534 "chloroplast thylakoid"
evidence=IDA] [GO:0009570 "chloroplast stroma" evidence=IDA]
[GO:0007389 "pattern specification process" evidence=RCA]
[GO:0008361 "regulation of cell size" evidence=RCA] [GO:0009658
"chloroplast organization" evidence=RCA] [GO:0009926 "auxin polar
transport" evidence=RCA] [GO:0010015 "root morphogenesis"
evidence=RCA] [GO:0010075 "regulation of meristem growth"
evidence=RCA] [GO:0016117 "carotenoid biosynthetic process"
evidence=RCA] [GO:0019344 "cysteine biosynthetic process"
evidence=RCA] [GO:0040007 "growth" evidence=RCA] [GO:0042744
"hydrogen peroxide catabolic process" evidence=RCA] [GO:0048481
"ovule development" evidence=RCA] InterPro:IPR006222
InterPro:IPR006223 Pfam:PF01571 PIRSF:PIRSF006487 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005739 GO:GO:0046686 GO:GO:0009570
GO:GO:0008483 GO:GO:0016020 GO:GO:0048046 GO:GO:0009941
EMBL:AC002131 GO:GO:0009534 GO:GO:0022626 GO:GO:0004047
GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669 KO:K00605
PANTHER:PTHR13847:SF5 EMBL:AY125509 EMBL:BT006361 EMBL:Z26545
IPI:IPI00538278 PIR:H86252 RefSeq:NP_001184969.1 RefSeq:NP_172650.1
RefSeq:NP_849646.1 UniGene:At.47506 ProteinModelPortal:O65396
SMR:O65396 STRING:O65396 SWISS-2DPAGE:O65396 PaxDb:O65396
PRIDE:O65396 ProMEX:O65396 EnsemblPlants:AT1G11860.1
EnsemblPlants:AT1G11860.2 EnsemblPlants:AT1G11860.3 GeneID:837733
KEGG:ath:AT1G11860 GeneFarm:1742 TAIR:At1g11860 eggNOG:COG0404
HOGENOM:HOG000239380 InParanoid:O65396 OMA:KALYGGM PhylomeDB:O65396
ProtClustDB:PLN02319 Genevestigator:O65396 GermOnline:AT1G11860
TIGRFAMs:TIGR00528 Uniprot:O65396
Length = 408
Score = 139 (54.0 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 49/227 (21%), Positives = 105/227 (46%)
Query: 89 CFEGVGIIDMSSFSKIKITCSDESLVDWLQQLCSNDV-NIPVGGISHTGMQNERGGYEND 147
C E + D++ + + D V +L+ L DV + G S T NE+GG +D
Sbjct: 75 CRENGSLFDVAHMCGLSLKGKD--CVPFLETLVVADVAGLAPGTGSLTVFTNEKGGAIDD 132
Query: 148 CILVRETETSYFMVSPTSQQTRVFEWMKNHLP---TKHYITLSDVTSKYTVINVVGPKAK 204
++ + T+ ++V + + ++ H+ +K + + +++ + GP A
Sbjct: 133 SVITKVTDEHIYLVVNAGCRDKDLAHIEEHMKAFKSKGGDVSWHIHDERSLLALQGPLAA 192
Query: 205 QLLSELCDEDIN-LHPFSYKRTDIGYASDVKLMGFTHTGEPGYCLYIPSEYALHVYQKIM 263
+L L ED++ L+ +++ DI S L +TGE G+ + +P E+A+ + + I+
Sbjct: 193 PVLQHLTKEDLSKLYFGNFQILDIN-GSTCFLTRTGYTGEDGFEISVPDEHAVDLAKAIL 251
Query: 264 TLGKDYNARDVGMFTQRYMRIEKFIPFWAEDLNSVTTPFESGSAYRV 310
+ R G+ + +R+E + + D+ +P E+G + +
Sbjct: 252 EKSEG-KVRLTGLGARDSLRLEAGLCLYGNDMEQHISPVEAGLTWAI 297
>TIGR_CMR|SO_0779 [details] [associations]
symbol:SO_0779 "glycine cleavage system T protein"
species:211586 "Shewanella oneidensis MR-1" [GO:0004047
"aminomethyltransferase activity" evidence=ISS] [GO:0005960
"glycine cleavage complex" evidence=ISS] [GO:0006546 "glycine
catabolic process" evidence=ISS] InterPro:IPR006222
InterPro:IPR006223 InterPro:IPR022903 Pfam:PF01571
PIRSF:PIRSF006487 GO:GO:0005737 GO:GO:0008483 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0004047 GO:GO:0006546
InterPro:IPR013977 Pfam:PF08669 KO:K00605 PANTHER:PTHR13847:SF5
eggNOG:COG0404 OMA:KALYGGM TIGRFAMs:TIGR00528 HOGENOM:HOG000239381
ProtClustDB:PRK00389 HAMAP:MF_00259 RefSeq:NP_716410.1
ProteinModelPortal:Q8EIQ8 SMR:Q8EIQ8 GeneID:1168634
KEGG:son:SO_0779 PATRIC:23521231 Uniprot:Q8EIQ8
Length = 364
Score = 138 (53.6 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 49/230 (21%), Positives = 107/230 (46%)
Query: 84 EEYRACFEGVGIIDMSSFSKIKITCSDESLVDWLQQLCSNDV-NIPVGGIS-HTGMQNER 141
EE+ A + G+ D+S + + +T +D +L++L +NDV + V G + + GM ++
Sbjct: 35 EEHHAVRQDAGMFDVSHMTVVDVTGTDACA--FLRKLLANDVAKLKVPGKALYGGMLDDN 92
Query: 142 GGYENDCILVRETETSYFMVSPTSQQTRVFEWMKNHLPTKHY-ITLSDVTSKYTVINVVG 200
G +D I T+T Y +V ++ + + W+ ++ + +T+++ + +I V G
Sbjct: 93 AGIIDDLITYYLTDTFYRVVVNSATREKDLAWIAKQ--SQGFDVTVTE-RPELAMIAVQG 149
Query: 201 PKAKQLLSELCDEDINLHPFSYKRTDIGYASDVKLMGFTHTGEPGYCLYIPSEYALHVYQ 260
P AK + + + N K A + + +TGE GY + +P A ++Q
Sbjct: 150 PNAKAKAAAVFSSEQNAAIEGMKPFFGKQAGSLFIATTGYTGEAGYEIIVPETEAEALWQ 209
Query: 261 KIMTLGKDYNARDVGMFTQRYMRIEKFIPFWAEDLNSVTTPFESGSAYRV 310
++ D + G+ + +R+E + + D++ P + + +
Sbjct: 210 ALL----DQGVKPCGLGARDTLRLEAGMNLYGLDMDETINPLAANMGWTI 255
>TIGR_CMR|SPO_1579 [details] [associations]
symbol:SPO_1579 "aminomethyl transferase family protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004047
"aminomethyltransferase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR006222
InterPro:IPR006223 Pfam:PF01571 PIRSF:PIRSF006487 GO:GO:0005737
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0004047 GO:GO:0006546
InterPro:IPR013977 Pfam:PF08669 KO:K00605 PANTHER:PTHR13847:SF5
HOGENOM:HOG000239381 RefSeq:YP_166820.1 ProteinModelPortal:Q5LT35
GeneID:3192995 KEGG:sil:SPO1579 PATRIC:23376481 OMA:MGTAWTY
ProtClustDB:CLSK864705 Uniprot:Q5LT35
Length = 381
Score = 138 (53.6 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 54/230 (23%), Positives = 105/230 (45%)
Query: 78 FFDFMEEEYRACFEGV----GIIDMSSFSKIKITCSDESLVDWLQQLCSNDVN-IPVGGI 132
F+D +E +A +E V G++D+S KI ++ + V + + + +V+ + G
Sbjct: 32 FYDHTDERAKADYEAVRTKAGLMDVSGLKKIHLSGPHAAAV--IDRATTRNVDKLMPGRA 89
Query: 133 SHTGMQNERGGYENDCILVRETETSYFMVSPTSQQTRVFEWMKNHLPTKHYITLSDVTSK 192
+ M ++RG + +DC++ R + ++ +V T M + I D+
Sbjct: 90 VYACMLDDRGLFIDDCVIYRLSVNNWMLVHGTGTGHESLA-MAAYGKNVSMIFDDDLHD- 147
Query: 193 YTVINVVGPKAKQLLSELCDEDINLHPFSYKRTDIGYASDVKLMGFTHTGEPGYCLYIPS 252
+++ GP A L++ +L F +T + + V + +TGE GY ++
Sbjct: 148 ---MSLQGPVAVDFLAKHVPGIRDLAYFGIIQTKL-FGKPVMISRTGYTGERGYEIFCEG 203
Query: 253 EYALHVYQKIMTLGKDYNARDVGMFTQRYMRIEKFIPFWAEDLNSVTTPF 302
+A+ ++ I+ GKD V T +R E ++ F+ D NS T PF
Sbjct: 204 RHAIALWDAILEDGKDMGIVPVQFSTLDLLRTESYLLFYPGD-NSETYPF 252
>GENEDB_PFALCIPARUM|PF13_0345 [details] [associations]
symbol:PF13_0345 "aminomethyltransferase,
mitochondrial precursor" species:5833 "Plasmodium falciparum"
[GO:0005739 "mitochondrion" evidence=ISS] InterPro:IPR006222
InterPro:IPR006223 Pfam:PF01571 PIRSF:PIRSF006487 GO:GO:0005739
EMBL:AL844509 GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977
Pfam:PF08669 KO:K00605 PANTHER:PTHR13847:SF5 HOGENOM:HOG000239380
OMA:KPAFWGR ProtClustDB:CLSZ2429438 RefSeq:XP_001350365.1
ProteinModelPortal:Q8I6T0 PRIDE:Q8I6T0
EnsemblProtists:PF13_0345:mRNA GeneID:814304 KEGG:pfa:PF13_0345
EuPathDB:PlasmoDB:PF3D7_1365500 Uniprot:Q8I6T0
Length = 406
Score = 138 (53.6 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 53/209 (25%), Positives = 104/209 (49%)
Query: 109 SDESLVDWLQQLCSNDVN-IPVGGISHTGMQNERGGYENDC-ILVRETETSYFMVSPTSQ 166
S E ++++++ +D+ + + + N++GG +D I++RE Y ++ Q
Sbjct: 86 SGEDKINFIEKYVGSDIKGLWENECRISLLLNDKGGIIDDIMIILRE---KYLLLYLNIQ 142
Query: 167 -QTRVFEWMKNHLPT--KHYITLSDVTSKYTVINVVGPKAKQLLSELCD---EDI--NLH 218
+ +V++++K+ L K + + + TS ++ I + G K+ +L EL D E + NL
Sbjct: 143 CKEKVYKYLKDKLLENGKLQVQIEEFTS-HSSICIQGSKSSDVLKELIDYNNESVETNLD 201
Query: 219 PFSYKR---TDIGYASDVKLMGFTHTGEPGYCLYIPSEYALHVYQKIMTLGKDYNARDVG 275
S+ T I + L +T TGE G+ + IP++Y +Y I+ K+ + G
Sbjct: 202 NCSFMSSTLTKINKIDNCILNRYTCTGEDGFDILIPNKYVNDLYNLIL---KNELVKPGG 258
Query: 276 MFTQRYMRIEKFIPFWAEDLNSVTTPFES 304
+ Q +R+E + +D+N TP ES
Sbjct: 259 LAVQNTLRLESGFCEYGKDINEDITPIES 287
>UNIPROTKB|Q8I6T0 [details] [associations]
symbol:PF13_0345 "Aminomethyltransferase, mitochondrial"
species:36329 "Plasmodium falciparum 3D7" [GO:0005739
"mitochondrion" evidence=ISS] InterPro:IPR006222 InterPro:IPR006223
Pfam:PF01571 PIRSF:PIRSF006487 GO:GO:0005739 EMBL:AL844509
GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669
KO:K00605 PANTHER:PTHR13847:SF5 HOGENOM:HOG000239380 OMA:KPAFWGR
ProtClustDB:CLSZ2429438 RefSeq:XP_001350365.1
ProteinModelPortal:Q8I6T0 PRIDE:Q8I6T0
EnsemblProtists:PF13_0345:mRNA GeneID:814304 KEGG:pfa:PF13_0345
EuPathDB:PlasmoDB:PF3D7_1365500 Uniprot:Q8I6T0
Length = 406
Score = 138 (53.6 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 53/209 (25%), Positives = 104/209 (49%)
Query: 109 SDESLVDWLQQLCSNDVN-IPVGGISHTGMQNERGGYENDC-ILVRETETSYFMVSPTSQ 166
S E ++++++ +D+ + + + N++GG +D I++RE Y ++ Q
Sbjct: 86 SGEDKINFIEKYVGSDIKGLWENECRISLLLNDKGGIIDDIMIILRE---KYLLLYLNIQ 142
Query: 167 -QTRVFEWMKNHLPT--KHYITLSDVTSKYTVINVVGPKAKQLLSELCD---EDI--NLH 218
+ +V++++K+ L K + + + TS ++ I + G K+ +L EL D E + NL
Sbjct: 143 CKEKVYKYLKDKLLENGKLQVQIEEFTS-HSSICIQGSKSSDVLKELIDYNNESVETNLD 201
Query: 219 PFSYKR---TDIGYASDVKLMGFTHTGEPGYCLYIPSEYALHVYQKIMTLGKDYNARDVG 275
S+ T I + L +T TGE G+ + IP++Y +Y I+ K+ + G
Sbjct: 202 NCSFMSSTLTKINKIDNCILNRYTCTGEDGFDILIPNKYVNDLYNLIL---KNELVKPGG 258
Query: 276 MFTQRYMRIEKFIPFWAEDLNSVTTPFES 304
+ Q +R+E + +D+N TP ES
Sbjct: 259 LAVQNTLRLESGFCEYGKDINEDITPIES 287
>TIGR_CMR|SPO_1586 [details] [associations]
symbol:SPO_1586 "sarcosine oxidase, alpha subunit family"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0016647
"oxidoreductase activity, acting on the CH-NH group of donors,
oxygen as acceptor" evidence=ISS] InterPro:IPR006222
InterPro:IPR006277 InterPro:IPR013027 Pfam:PF01571
PIRSF:PIRSF037980 PRINTS:PR00368 GO:GO:0005737 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0046653 GO:GO:0004047 GO:GO:0006546
InterPro:IPR013977 Pfam:PF08669 GO:GO:0008115 HOGENOM:HOG000218134
KO:K00302 PANTHER:PTHR13847:SF41 TIGRFAMs:TIGR01372
RefSeq:YP_166827.1 ProteinModelPortal:Q5LT28 GeneID:3192653
KEGG:sil:SPO1586 PATRIC:23376495 OMA:ARREPNT
ProtClustDB:CLSK2463878 Uniprot:Q5LT28
Length = 983
Score = 141 (54.7 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 53/233 (22%), Positives = 103/233 (44%)
Query: 82 MEEEYRACFEGVGIIDMSSFSKIKITCSDESLVDWLQQL-CSNDVNIPVGGISHTGMQNE 140
++ E + VGI D+++ KI + +D + ++L ++ C+ + VG + M E
Sbjct: 631 VDREVTQTRKSVGICDVTTLGKIDVQGADAA--EFLNKVYCNAFAKLAVGRTRYGLMLRE 688
Query: 141 RGGYENDCILVRETETSYFMVSPTSQQTRVF---EWMKNHLPTKHYITLSDVTSKYTVIN 197
G +D R E + + + T+ V+ E+++ L + L T +
Sbjct: 689 DGIAMDDGTAARLAEDHFVVTTTTANAVPVYRHMEFVRQCLFPDMDVQLISTTEAWAQFA 748
Query: 198 VVGPKAKQLLSELCD--EDINLHPFSYKR-TDIGYASDVK--LMGFTHTGEPGYCLYIPS 252
V GP A++LL ++ D D++ F + +I ++ L + +GE Y + +P+
Sbjct: 749 VAGPNARKLLQKIVDPAHDLSNEGFPFMACAEITVCGGLRARLFRISFSGELAYEIAVPT 808
Query: 253 EYALHVYQKIMTLGKDYNARDVGMFTQRYMRIEKFIPFWAEDLNSVTTPFESG 305
Y + +++M G +++ G MRIEK +LN TT G
Sbjct: 809 RYGDALIRRMMQAGAEFDVVAYGTEALGVMRIEKGHAA-GNELNGTTTALNLG 860
>TIGR_CMR|SPO_A0057 [details] [associations]
symbol:SPO_A0057 "glycine cleavage system T protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004047
"aminomethyltransferase activity" evidence=ISS] [GO:0006546
"glycine catabolic process" evidence=ISS] InterPro:IPR006222
InterPro:IPR006223 Pfam:PF01571 PIRSF:PIRSF006487 GO:GO:0005737
GO:GO:0008483 GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977
Pfam:PF08669 EMBL:CP000032 GenomeReviews:CP000032_GR KO:K00605
PANTHER:PTHR13847:SF5 HOGENOM:HOG000239380 TIGRFAMs:TIGR00528
OMA:QRYAMFT RefSeq:YP_164888.1 ProteinModelPortal:Q5LLH0
GeneID:3196668 KEGG:sil:SPOA0057 PATRIC:23381418 Uniprot:Q5LLH0
Length = 365
Score = 135 (52.6 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 47/230 (20%), Positives = 104/230 (45%)
Query: 85 EYRACFEGVGIIDMSSFSKIKITCSDESLVDWLQQLCSND-VNIPVGGISHTGMQNERGG 143
E++ C E + D+S ++ + D L++LC + +P G + N GG
Sbjct: 40 EHKQCREKAALFDVSHMGQVILRGDDIGAK--LEKLCPQVFLTLPEGKARYGFFTNAEGG 97
Query: 144 YENDCILVRETETSYFMVSPTSQQTRVFEWMKNHLPTKHYITLSDVTSKYTVINVVGPKA 203
+D I+ E +F+V + + + + HL + ++++ + ++ V GP A
Sbjct: 98 IMDDLIVSNAGEY-FFVVVNAALRHQDIPHLAAHLDG---VEVTEIFDR-ALVAVQGPSA 152
Query: 204 KQLLSELCDEDINLHPFSYKRTDIGYAS--DVKLMGFTHTGEPGYCLYIPSEYALHVYQK 261
+ ++ LC +L + T +G D ++ +TGE GY + IP A+ + +
Sbjct: 153 EDVVGRLCPAARDL---KFMETMLGEIDGVDCRISRLGYTGEDGYEISIPEGEAIRI-SR 208
Query: 262 IMTLGKDYNARDVGMFTQRYMRIEKFIPFWAEDLNSVTTPFESGSAYRVK 311
+ +D G+ + +R+E + + D+++ T+P E+ + ++
Sbjct: 209 LFLAHED--CEPAGLGARDSLRLEAGLCLYGNDIDNGTSPIEASLLWAIQ 256
>DICTYBASE|DDB_G0292326 [details] [associations]
symbol:gcvT "aminomethyltransferase" species:44689
"Dictyostelium discoideum" [GO:0006546 "glycine catabolic process"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0004047
"aminomethyltransferase activity" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0008483 "transaminase
activity" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR006222
InterPro:IPR006223 Pfam:PF01571 PIRSF:PIRSF006487
dictyBase:DDB_G0292326 GO:GO:0005739 GO:GO:0008483
GenomeReviews:CM000155_GR EMBL:AAFI02000189 GO:GO:0004047
GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669 KO:K00605
PANTHER:PTHR13847:SF5 eggNOG:COG0404 OMA:KALYGGM TIGRFAMs:TIGR00528
RefSeq:XP_629708.1 HSSP:P48728 ProteinModelPortal:Q54DD3
STRING:Q54DD3 PRIDE:Q54DD3 EnsemblProtists:DDB0231218
GeneID:8628622 KEGG:ddi:DDB_G0292326 ProtClustDB:CLSZ2429438
Uniprot:Q54DD3
Length = 403
Score = 134 (52.2 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 50/224 (22%), Positives = 101/224 (45%)
Query: 94 GIIDMSSFSKIKITCSDESLVDWLQQLCSNDVN-IPVGGISHTGMQNERGGYENDCILVR 152
G+ D+S +++I D V + + + D+ +P G + NE+GG +D ++
Sbjct: 68 GLFDVSHMGQLRIHGKDR--VKFFESIVVADLQALPTGHSKLSVFTNEKGGIIDDTMITN 125
Query: 153 ETETSYFMVSP------TSQQTRVFEWMKNHLPTKHYITLSDVTSKYTVINVVGPKAKQL 206
++ Y +V+ S + K+ PT H +++ + ++I + GP + +
Sbjct: 126 AGDSLYVVVNAGCADKDISHINEKIKEFKSVNPT-HDVSMQ-LLEDLSLIAIQGPTTESI 183
Query: 207 LSELC-DEDINLHPFSYKR--TDIGYASDVKLMGFTHTGEPGYCLYIPSEYALHVYQKIM 263
L + D+DI F +R T G V G+T GE G+ + +PS+ A+ + + +
Sbjct: 184 LQKFVKDQDITNMEFMTQRPMTIAGIDCIVTRCGYT--GEDGFEISVPSKQAVRLAELFL 241
Query: 264 TLGK---DYNARDVGMFTQRYMRIEKFIPFWAEDLNSVTTPFES 304
+ + G+ + +R+E + + DLN TP E+
Sbjct: 242 ATSNASIESGIKPAGLGARDSLRLEAGLCLYGHDLNDDITPIEA 285
>FB|FBgn0032287 [details] [associations]
symbol:CG6415 species:7227 "Drosophila melanogaster"
[GO:0004047 "aminomethyltransferase activity" evidence=ISS]
[GO:0005960 "glycine cleavage complex" evidence=ISS] [GO:0006546
"glycine catabolic process" evidence=ISS] [GO:0005811 "lipid
particle" evidence=IDA] InterPro:IPR006222 InterPro:IPR006223
Pfam:PF01571 PIRSF:PIRSF006487 GO:GO:0008483 GO:GO:0005811
GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669
PANTHER:PTHR13847:SF5 eggNOG:COG0404 TIGRFAMs:TIGR00528
EMBL:BT021235 ProteinModelPortal:Q5BII9 STRING:Q5BII9 PaxDb:Q5BII9
PRIDE:Q5BII9 UCSC:CG6415-RA FlyBase:FBgn0032287 InParanoid:Q5BII9
OrthoDB:EOG4H44K8 ArrayExpress:Q5BII9 Bgee:Q5BII9 Uniprot:Q5BII9
Length = 409
Score = 133 (51.9 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 54/228 (23%), Positives = 106/228 (46%)
Query: 93 VG-IIDMSSFSKIKITCSDESLVDWLQQLCSNDV-NIPVGGISHTGMQNERGGYENDCIL 150
VG I D+S + +I D + L+ +C+ D+ P G S T NE GG +D I+
Sbjct: 72 VGSIFDVSHMLQSRIFGKDAAAC--LESVCTADILGTPEGSGSLTVFTNEAGGILDDLIV 129
Query: 151 VRETETSYFMVSPTSQQTRVFEWMK----NHLPTKHYITLSDVT-SKYTVINVVGPKAKQ 205
+ +E ++VS + + + MK N +++ +T + +++ V GP+ +
Sbjct: 130 NKVSEKELYVVSNAAMKEQDMGIMKTAVDNFKSQGKDVSIEFLTPADQSLVAVQGPQVAK 189
Query: 206 LLSELCDEDINLHPFSYKR---TDIGYASDVKLMGFTHTGEPGYCLYIPSEYALHVYQKI 262
LS+L +L + T + +V++ +TGE G + + S A + + +
Sbjct: 190 ELSKLLTGKASLDQLYFMSSFVTTLAGIPNVRITRCGYTGEDGVEISVASSQAQKLTESL 249
Query: 263 MTLGKDYNARDVGMFTQRYMRIEKFIPFWAEDLNSVTTPFESGSAYRV 310
+ G + G+ + +R+E + + D++S TTP E+ A+ V
Sbjct: 250 LESGV---LKLAGLGARDSLRLEAGLCLYGSDIDSKTTPVEAALAWLV 294
>SGD|S000002426 [details] [associations]
symbol:GCV1 "T subunit of the mitochondrial glycine
decarboxylase complex" species:4932 "Saccharomyces cerevisiae"
[GO:0005739 "mitochondrion" evidence=IEA;IDA] [GO:0006544 "glycine
metabolic process" evidence=IMP] [GO:0004375 "glycine dehydrogenase
(decarboxylating) activity" evidence=ISS;IMP] [GO:0006730
"one-carbon metabolic process" evidence=IGI;IMP] [GO:0006546
"glycine catabolic process" evidence=IEA;IC] [GO:0004047
"aminomethyltransferase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008483 "transaminase activity"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0005960 "glycine cleavage complex" evidence=ISS]
InterPro:IPR006222 InterPro:IPR006223 Pfam:PF01571
PIRSF:PIRSF006487 SGD:S000002426 GO:GO:0005739 GO:GO:0008483
EMBL:BK006938 GO:GO:0006730 GO:GO:0004047 GO:GO:0006546
InterPro:IPR013977 Pfam:PF08669 EMBL:X95966 EMBL:Z49770
GO:GO:0005960 KO:K00605 PANTHER:PTHR13847:SF5 eggNOG:COG0404
HOGENOM:HOG000239380 TIGRFAMs:TIGR00528
GeneTree:ENSGT00510000047333 OMA:KPAFWGR OrthoDB:EOG4WT0K6
EMBL:L41522 EMBL:Z74315 PIR:S54642 RefSeq:NP_010302.1
ProteinModelPortal:P48015 SMR:P48015 IntAct:P48015 STRING:P48015
PaxDb:P48015 PeptideAtlas:P48015 EnsemblFungi:YDR019C GeneID:851582
KEGG:sce:YDR019C CYGD:YDR019c NextBio:969049 Genevestigator:P48015
GermOnline:YDR019C Uniprot:P48015
Length = 400
Score = 126 (49.4 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 48/220 (21%), Positives = 106/220 (48%)
Query: 94 GIIDMSSFSKIKITCSDESLVDWLQQLCSNDVN-IPVGGISHTGMQNERGGYENDCILVR 152
G+ D+S + K+ S V +LQ++ D N +PVG + + + N +GG +D I+ +
Sbjct: 61 GLFDVSHMLQSKL--SGPHSVKFLQRVTPTDFNALPVGSGTLSVLLNPQGGVVDDTIITK 118
Query: 153 ETETS-YFMVSPTSQQTRVFEWMKNHLPTKHYITLS-DVTSKYTVINVVGPKAKQLLSEL 210
E + + +++V+ R E+ + L + + +++ + GPKAK +L L
Sbjct: 119 ENDDNEFYIVTNAGCAERDTEFFHDELQNGSTLDCQWKIIEGRSLLALQGPKAKDVLEPL 178
Query: 211 CDEDI---NLHPFSY-KRTDIGY--ASDVKLMGFTHTGEPGYCLYIPSEYALHVYQKIMT 264
+ +L + +R + S V++ +TGE G+ + I +E A+ ++++
Sbjct: 179 LSKTAPGKDLKELFFGQRHEFALKDGSLVQIARGGYTGEDGFEISIANEKAVEFAEQLLA 238
Query: 265 LGKDYNARDVGMFTQRYMRIEKFIPFWAEDLNSVTTPFES 304
+ + +G+ + +R+E + + +L+ TP E+
Sbjct: 239 ---NPVMKPIGLAARDSLRLEAGMCLYGHELDESITPVEA 275
>POMBASE|SPAC31G5.14 [details] [associations]
symbol:gcv1 "glycine decarboxylase T subunit
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004047
"aminomethyltransferase activity" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS;IDA] [GO:0005960 "glycine cleavage
complex" evidence=ISS] [GO:0008483 "transaminase activity"
evidence=ISS] [GO:0019464 "glycine decarboxylation via glycine
cleavage system" evidence=ISS] InterPro:IPR006222
InterPro:IPR006223 Pfam:PF01571 PIRSF:PIRSF006487
PomBase:SPAC31G5.14 GO:GO:0005739 GO:GO:0008483 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0004047 InterPro:IPR013977
Pfam:PF08669 GO:GO:0019464 GO:GO:0005960 KO:K00605
PANTHER:PTHR13847:SF5 eggNOG:COG0404 HOGENOM:HOG000239380
OMA:KALYGGM TIGRFAMs:TIGR00528 EMBL:D84656 PIR:T38631
RefSeq:NP_594015.1 ProteinModelPortal:O14110 STRING:O14110
PRIDE:O14110 EnsemblFungi:SPAC31G5.14.1 GeneID:2543195
KEGG:spo:SPAC31G5.14 OrthoDB:EOG4WT0K6 NextBio:20804218
Uniprot:O14110
Length = 387
Score = 124 (48.7 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 42/172 (24%), Positives = 84/172 (48%)
Query: 139 NERGGYENDCILVRETETSYFMVSPTSQQTRVFEWMKNHLPTKHYITLSDVTSKYTVINV 198
NE GG +D I+ ++ E +Y++V+ + + +K H+ + L V + +I +
Sbjct: 111 NETGGIIDDTIISKQDENTYYIVTNAACSEKDEANLKKHIENWKGVELERVQGR-ALIAI 169
Query: 199 VGPKAKQLLSELCDE-DINLHPFSYKRTDIGYASDVKLMGFT---HTGEPGYCLYIPSEY 254
GP+ ++ +L D ++ F + + + VK + F+ +TGE G+ + IP E
Sbjct: 170 QGPETASVVQKLIPNVDFSVLKFG-QSAYVDFKG-VKCL-FSRSGYTGEDGFEVSIPEEV 226
Query: 255 ALHVYQKIMTLGKDYNARDVGMFTQRYMRIEKFIPFWAEDLNSVTTPFESGS 306
++ TL D R +G+ + +R+E + + D++ T+P E GS
Sbjct: 227 SVDFAS---TLLADTRVRPIGLGARDTLRLEAGMCLYGSDIDDTTSPVE-GS 274
>WB|WBGene00017765 [details] [associations]
symbol:gcst-1 species:6239 "Caenorhabditis elegans"
[GO:0004047 "aminomethyltransferase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006546 "glycine
catabolic process" evidence=IEA] InterPro:IPR006222
InterPro:IPR006223 Pfam:PF01571 PIRSF:PIRSF006487 GO:GO:0005737
GO:GO:0008483 GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977
Pfam:PF08669 KO:K00605 PANTHER:PTHR13847:SF5 eggNOG:COG0404
HOGENOM:HOG000239380 OMA:KALYGGM TIGRFAMs:TIGR00528
GeneTree:ENSGT00510000047333 EMBL:FO080538 PIR:T25732
RefSeq:NP_504502.1 ProteinModelPortal:Q22968 SMR:Q22968
STRING:Q22968 PaxDb:Q22968 EnsemblMetazoa:F25B4.1.1
EnsemblMetazoa:F25B4.1.2 GeneID:178960 KEGG:cel:CELE_F25B4.1
UCSC:F25B4.1.1 CTD:178960 WormBase:F25B4.1 InParanoid:Q22968
NextBio:903294 Uniprot:Q22968
Length = 402
Score = 124 (48.7 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 46/225 (20%), Positives = 105/225 (46%)
Query: 93 VGIIDMSSFSKIKITCSDESLVDWLQQLCSNDVN-IPVGGISHTGMQNERGGYENDCILV 151
V + D+S + IT D V +++ L + DV + + + NE+GG ++D I++
Sbjct: 69 VSLFDVSHMLQTYITGKDR--VAFIESLTTADVQGLQENSGTLSVFTNEKGGIKDDLIIM 126
Query: 152 RETETSYFMVSPTSQQTRVFEWMKNHLP---TKHYITLSDVTSKYTVINVVGPKAKQLLS 208
+ + F+V+ + +++ + +K + ++ V GP+ ++L
Sbjct: 127 KTDKDFLFLVTNAGCIEKDLPYLQENAAAWRSKGKDVKIETLDNRGLVAVQGPEMAKVLQ 186
Query: 209 ELCDEDINLHPFSYKRTDIG--YASD-VKLMGFTHTGEPGYCLYIPSEYALHVYQKIMTL 265
E DI+L ++ +T +G + D ++ +TGE G + + A + ++++
Sbjct: 187 E--GTDIDLSKLTFMKTTVGKVFGIDGCRVTRCGYTGEDGVEISVDPTKAEQLVERLLA- 243
Query: 266 GKDYNARDVGMFTQRYMRIEKFIPFWAEDLNSVTTPFESGSAYRV 310
+ + + G+ + +R+E + + D+ TTP E+G A+ V
Sbjct: 244 SQAGSVKLAGLGARDALRLEAGLCLYGSDIEENTTPIEAGLAFVV 288
>UNIPROTKB|H3BQG3 [details] [associations]
symbol:PDPR "Pyruvate dehydrogenase phosphatase regulatory
subunit, mitochondrial" species:9606 "Homo sapiens" [GO:0016491
"oxidoreductase activity" evidence=IEA] InterPro:IPR006076
Pfam:PF01266 GO:GO:0016491 EMBL:AC009060 EMBL:AC009022
HGNC:HGNC:30264 ProteinModelPortal:H3BQG3 SMR:H3BQG3
Ensembl:ENST00000565186 Bgee:H3BQG3 Uniprot:H3BQG3
Length = 491
Score = 124 (48.7 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 25/71 (35%), Positives = 40/71 (56%)
Query: 1 MNGNSLQGAGGIGRAVAEWMTHGEATQELLSFDVQRFLDLHNNRQYLQQRIREVVGSTYR 60
MN L GG G+ +AEWM HG ++ + D++RF L ++R +L+ R+ EV+ Y
Sbjct: 384 MNSAGLSFGGGAGKYLAEWMVHGYPSENVWELDLKRFGALQSSRTFLRHRVMEVMPLMYD 443
Query: 61 VGDPRPEMPPG 71
+ PR + G
Sbjct: 444 LKVPRWDFQTG 454
>UNIPROTKB|P64220 [details] [associations]
symbol:gcvT "Aminomethyltransferase" species:1773
"Mycobacterium tuberculosis" [GO:0005618 "cell wall" evidence=IDA]
[GO:0040007 "growth" evidence=IMP] InterPro:IPR006222
InterPro:IPR006223 InterPro:IPR022903 Pfam:PF01571
PIRSF:PIRSF006487 GO:GO:0005737 GO:GO:0040007 GO:GO:0005618
GO:GO:0008483 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR EMBL:BX842579 GO:GO:0004047 GO:GO:0006546
InterPro:IPR013977 Pfam:PF08669 KO:K00605 PANTHER:PTHR13847:SF5
eggNOG:COG0404 TIGRFAMs:TIGR00528 HOGENOM:HOG000239381
ProtClustDB:PRK00389 HAMAP:MF_00259 OMA:KPAFWGR PIR:D70786
RefSeq:NP_216727.1 RefSeq:NP_336739.1 RefSeq:YP_006515631.1
ProteinModelPortal:P64220 SMR:P64220
EnsemblBacteria:EBMYCT00000003464 EnsemblBacteria:EBMYCT00000070612
GeneID:13318900 GeneID:887233 GeneID:924158 KEGG:mtc:MT2267
KEGG:mtu:Rv2211c KEGG:mtv:RVBD_2211c PATRIC:18126736
TubercuList:Rv2211c Uniprot:P64220
Length = 367
Score = 116 (45.9 bits), Expect = 0.00037, P = 0.00037
Identities = 51/242 (21%), Positives = 96/242 (39%)
Query: 71 GTFFKPKFFDFMEEEYRACFEGVGIIDMSSFSKIKITCSDESLVDWLQQLCSNDVN-IPV 129
G + P + E+ A VG+ D+S K + ++ +ND+ I
Sbjct: 27 GGWLMPVSYAGTVSEHNATRTAVGLFDVSHLGKALVR--GPGAAQFVNSALTNDLGRIGP 84
Query: 130 GGISHTGMQNERGGYENDCILVRETETSYFMVSPTSQQTRVFEWMKNHLPTKHYITLSDV 189
G +T E GG +D I ++ F+V + V ++ P ++++++
Sbjct: 85 GKAQYTLCCTESGGVIDDLIAYYVSDDEIFLVPNAANTAAVVGALQAAAPGG--LSITNL 142
Query: 190 TSKYTVINVVGPKAKQLLSELCDEDINLHPFSYKRTDIGYAS-DVKLMGFTHTGEPGYCL 248
Y V+ V GP + +L+ L + Y D Y+ V++ +TGE GY L
Sbjct: 143 HRSYAVLAVQGPCSTDVLTAL-GLPTEMDYMGY--ADASYSGVPVRVCRTGYTGEHGYEL 199
Query: 249 YIPSEYALHVYQKIMTLGKDYNARDVGMFTQRYMRIEKFIPFWAEDLNSVTTPFESGSAY 308
P E A V+ ++ G+ + +R E P +L+ +P ++ +
Sbjct: 200 LPPWESAGVVFDALLAAVSAAGGEPAGLGARDTLRTEMGYPLHGHELSLDISPLQARCGW 259
Query: 309 RV 310
V
Sbjct: 260 AV 261
>UNIPROTKB|Q5SYV1 [details] [associations]
symbol:SARDH "Sarcosine dehydrogenase, mitochondrial"
species:9606 "Homo sapiens" [GO:0016491 "oxidoreductase activity"
evidence=IEA] InterPro:IPR006076 Pfam:PF01266 GO:GO:0016491
EMBL:AL365494 HOGENOM:HOG000251716 EMBL:AL590710 UniGene:Hs.198003
HGNC:HGNC:10536 HOVERGEN:HBG002326 IPI:IPI00642619 SMR:Q5SYV1
Ensembl:ENST00000427237 Uniprot:Q5SYV1
Length = 609
Score = 91 (37.1 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 18/67 (26%), Positives = 35/67 (52%)
Query: 2 NGNSLQGAGGIGRAVAEWMTHGEATQELLSFDVQRFL-DLHNNRQYLQQRIREVVGSTYR 60
N + GG G+ +A W+ HG +++ +D++RF L ++ +++++R E Y
Sbjct: 410 NSAGMMLGGGCGQELAHWIIHGRPEKDMHGYDIRRFHHSLTDHPRWIRERSHESYAKNYS 469
Query: 61 VGDPRPE 67
V P E
Sbjct: 470 VVFPHDE 476
Score = 71 (30.1 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 21/60 (35%), Positives = 27/60 (45%)
Query: 72 TFFKPKFFDFMEEEYRACFEGVGIIDMSSFSKIKITCSD-ESLVDWLQQLCSNDVNIPVG 130
TF P D +++E AC + DMS F K + D DWL S DV+ P G
Sbjct: 547 TFAFPPHHDTIKKECLACRGAAAVFDMSYFGKFYLVGLDARKAADWL---FSADVSRPPG 603
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.137 0.418 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 313 313 0.00081 116 3 11 22 0.39 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 90
No. of states in DFA: 612 (65 KB)
Total size of DFA: 243 KB (2132 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 25.67u 0.08s 25.75t Elapsed: 00:00:16
Total cpu time: 25.69u 0.08s 25.77t Elapsed: 00:00:16
Start: Thu Aug 15 11:53:37 2013 End: Thu Aug 15 11:53:53 2013