Query psy6090
Match_columns 674
No_of_seqs 399 out of 3306
Neff 7.9
Searched_HMMs 46136
Date Fri Aug 16 17:23:09 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6090.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/6090hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0208|consensus 100.0 5E-116 1E-120 970.4 38.7 566 41-608 478-1116(1140)
2 TIGR01657 P-ATPase-V P-type AT 100.0 4.6E-88 1E-92 813.5 54.2 578 16-596 431-1053(1054)
3 KOG0209|consensus 100.0 7.2E-83 1.6E-87 692.2 42.1 550 41-613 489-1145(1160)
4 COG0474 MgtA Cation transport 100.0 4.8E-62 1E-66 577.8 37.3 497 25-586 340-887 (917)
5 KOG0202|consensus 100.0 2.1E-59 4.5E-64 514.4 27.6 479 74-609 397-963 (972)
6 TIGR01106 ATPase-IIC_X-K sodiu 100.0 3.4E-57 7.4E-62 542.5 47.7 552 17-604 328-975 (997)
7 TIGR01523 ATPase-IID_K-Na pota 100.0 1E-56 2.3E-61 537.2 45.2 482 74-605 448-1038(1053)
8 TIGR01517 ATPase-IIB_Ca plasma 100.0 1.6E-56 3.4E-61 535.3 46.6 519 16-604 359-931 (941)
9 TIGR01116 ATPase-IIA1_Ca sarco 100.0 2.8E-55 6.2E-60 522.6 47.4 534 17-606 273-910 (917)
10 KOG0204|consensus 100.0 6.4E-57 1.4E-61 494.0 22.9 467 74-606 479-1000(1034)
11 TIGR01522 ATPase-IIA2_Ca golgi 100.0 3.2E-53 6.9E-58 503.9 45.4 502 17-605 308-873 (884)
12 PRK10517 magnesium-transportin 100.0 1.7E-52 3.7E-57 495.0 45.7 501 16-612 354-895 (902)
13 PRK15122 magnesium-transportin 100.0 1.1E-52 2.5E-57 497.2 43.7 501 16-612 352-895 (903)
14 TIGR01524 ATPase-IIIB_Mg magne 100.0 8.6E-52 1.9E-56 489.1 46.3 498 15-607 318-855 (867)
15 TIGR01652 ATPase-Plipid phosph 100.0 8.9E-51 1.9E-55 491.4 41.5 412 74-498 441-937 (1057)
16 PLN03190 aminophospholipid tra 100.0 1.4E-48 3.1E-53 468.6 43.0 420 74-498 533-1040(1178)
17 KOG0203|consensus 100.0 1.7E-50 3.7E-55 443.2 9.9 487 69-596 411-989 (1019)
18 TIGR01647 ATPase-IIIA_H plasma 100.0 3.3E-45 7.2E-50 427.8 40.4 457 15-568 268-752 (755)
19 KOG0210|consensus 100.0 1.8E-45 3.9E-50 394.3 26.1 484 74-609 474-1035(1051)
20 KOG0206|consensus 100.0 3.6E-44 7.8E-49 417.4 18.1 412 74-494 464-959 (1151)
21 PRK14010 potassium-transportin 100.0 6.1E-31 1.3E-35 299.3 21.0 178 142-423 404-584 (673)
22 PRK01122 potassium-transportin 100.0 2.1E-30 4.5E-35 295.2 23.4 165 142-410 408-575 (679)
23 TIGR01497 kdpB K+-transporting 100.0 2.9E-27 6.3E-32 268.9 20.7 165 142-410 409-576 (675)
24 TIGR01494 ATPase_P-type ATPase 99.9 1.8E-25 3.8E-30 252.1 25.5 261 18-422 215-481 (499)
25 KOG0205|consensus 99.9 1.8E-25 3.9E-30 240.0 11.2 206 141-406 441-648 (942)
26 COG2217 ZntA Cation transport 99.9 5.4E-24 1.2E-28 242.8 21.6 151 187-420 524-677 (713)
27 KOG0207|consensus 99.9 3.2E-23 6.9E-28 232.5 19.9 175 141-419 685-862 (951)
28 PRK11033 zntA zinc/cadmium/mer 99.9 9.3E-22 2E-26 230.1 22.1 173 143-420 532-706 (741)
29 COG2216 KdpB High-affinity K+ 99.9 4.3E-21 9.4E-26 202.5 13.8 159 142-403 410-570 (681)
30 TIGR01525 ATPase-IB_hvy heavy 99.8 1.5E-19 3.3E-24 206.2 20.3 283 16-420 229-525 (556)
31 PRK10671 copA copper exporting 99.8 3.8E-19 8.2E-24 211.9 21.0 173 145-420 616-790 (834)
32 TIGR01512 ATPase-IB2_Cd heavy 99.8 2.3E-18 5.1E-23 195.4 17.8 154 185-420 347-504 (536)
33 TIGR01511 ATPase-IB1_Cu copper 99.8 2.7E-18 5.8E-23 195.7 18.0 149 187-419 392-543 (562)
34 PF00702 Hydrolase: haloacid d 99.6 1.7E-16 3.7E-21 158.5 6.4 97 188-364 115-215 (215)
35 PF00689 Cation_ATPase_C: Cati 99.5 6.9E-14 1.5E-18 136.6 13.2 173 429-609 1-180 (182)
36 KOG4383|consensus 99.5 3.4E-13 7.3E-18 146.1 14.3 307 187-498 813-1188(1354)
37 COG4087 Soluble P-type ATPase 99.3 8.6E-12 1.9E-16 110.1 10.5 114 190-384 20-138 (152)
38 COG0561 Cof Predicted hydrolas 99.3 9.5E-12 2.1E-16 129.0 12.1 197 193-397 12-260 (264)
39 PRK10513 sugar phosphate phosp 99.3 1.9E-11 4.1E-16 127.1 13.3 194 199-396 19-266 (270)
40 PRK15126 thiamin pyrimidine py 99.2 4.5E-11 9.8E-16 124.5 12.7 190 199-395 18-259 (272)
41 PRK10976 putative hydrolase; P 99.2 5.3E-11 1.2E-15 123.5 13.0 65 332-396 190-262 (266)
42 TIGR01487 SPP-like sucrose-pho 99.2 2.2E-11 4.7E-16 122.3 8.7 188 199-394 17-215 (215)
43 PRK01158 phosphoglycolate phos 99.2 6.5E-11 1.4E-15 120.0 9.7 196 193-396 12-227 (230)
44 PLN02887 hydrolase family prot 99.2 1.5E-10 3.2E-15 131.1 13.0 65 332-396 507-577 (580)
45 TIGR01482 SPP-subfamily Sucros 99.2 2E-10 4.3E-15 115.9 11.5 191 200-395 15-222 (225)
46 PRK10530 pyridoxal phosphate ( 99.1 3.5E-10 7.6E-15 117.6 11.9 65 332-396 199-269 (272)
47 PF08282 Hydrolase_3: haloacid 99.1 1.8E-10 3.9E-15 117.3 8.9 189 198-394 13-254 (254)
48 TIGR01486 HAD-SF-IIB-MPGP mann 99.0 2.3E-09 5E-14 110.7 11.7 65 332-396 176-254 (256)
49 PRK03669 mannosyl-3-phosphogly 99.0 4.1E-09 8.9E-14 109.7 12.6 195 193-395 16-265 (271)
50 TIGR00099 Cof-subfamily Cof su 98.9 4E-09 8.7E-14 108.8 8.7 63 332-394 188-256 (256)
51 PRK00192 mannosyl-3-phosphogly 98.8 2.2E-08 4.7E-13 104.5 11.3 65 332-396 190-268 (273)
52 TIGR02137 HSK-PSP phosphoserin 98.8 4.9E-08 1.1E-12 97.0 11.1 130 200-397 68-198 (203)
53 PRK11133 serB phosphoserine ph 98.7 3.9E-08 8.6E-13 104.3 10.5 131 199-395 180-316 (322)
54 COG0560 SerB Phosphoserine pho 98.6 2.5E-07 5.5E-12 92.4 11.5 109 199-373 76-189 (212)
55 TIGR01485 SPP_plant-cyano sucr 98.6 1.3E-07 2.8E-12 97.2 8.6 197 198-395 19-244 (249)
56 TIGR02471 sucr_syn_bact_C sucr 98.6 1.2E-07 2.7E-12 96.5 8.0 65 332-396 159-233 (236)
57 TIGR02726 phenyl_P_delta pheny 98.5 2.3E-07 5E-12 89.3 8.0 104 206-389 40-145 (169)
58 PLN02382 probable sucrose-phos 98.5 5.1E-07 1.1E-11 99.3 9.3 192 201-395 29-257 (413)
59 TIGR02461 osmo_MPG_phos mannos 98.4 8.6E-07 1.9E-11 89.7 8.5 48 193-240 8-55 (225)
60 TIGR02463 MPGP_rel mannosyl-3- 98.4 1.6E-06 3.4E-11 87.4 10.2 51 201-253 17-67 (221)
61 TIGR01670 YrbI-phosphatas 3-de 98.4 8.4E-07 1.8E-11 84.3 7.1 104 208-395 36-146 (154)
62 TIGR00338 serB phosphoserine p 98.3 2.5E-06 5.3E-11 85.7 10.3 128 200-393 85-218 (219)
63 PTZ00174 phosphomannomutase; P 98.2 3.1E-06 6.7E-11 86.9 7.9 46 331-376 187-237 (247)
64 PF12710 HAD: haloacid dehalog 98.2 3.4E-06 7.4E-11 82.5 7.1 38 203-240 92-129 (192)
65 PRK13582 thrH phosphoserine ph 98.2 1.7E-05 3.7E-10 78.7 11.7 105 200-372 68-172 (205)
66 PRK09484 3-deoxy-D-manno-octul 98.1 4E-06 8.6E-11 82.1 6.5 96 207-386 55-156 (183)
67 PRK10187 trehalose-6-phosphate 98.1 1.9E-05 4E-10 82.1 11.8 184 200-394 36-240 (266)
68 TIGR01491 HAD-SF-IB-PSPlk HAD- 98.1 1.4E-05 3.1E-10 78.8 10.0 108 200-372 80-191 (201)
69 PRK14502 bifunctional mannosyl 98.1 1E-05 2.2E-10 92.1 9.5 48 193-240 425-473 (694)
70 PRK12702 mannosyl-3-phosphogly 98.1 9.2E-05 2E-09 76.5 14.8 51 198-251 16-66 (302)
71 KOG1615|consensus 98.0 1.4E-05 3E-10 76.1 6.9 108 200-371 88-200 (227)
72 PRK08238 hypothetical protein; 97.9 0.0011 2.3E-08 74.4 21.2 41 200-240 72-112 (479)
73 TIGR03333 salvage_mtnX 2-hydro 97.9 5.3E-05 1.2E-09 76.0 9.6 114 198-370 68-182 (214)
74 TIGR01489 DKMTPPase-SF 2,3-dik 97.9 4.8E-05 1E-09 74.1 8.8 114 199-368 71-186 (188)
75 COG1778 Low specificity phosph 97.8 8.3E-05 1.8E-09 68.8 8.1 112 207-402 42-163 (170)
76 cd01427 HAD_like Haloacid deha 97.8 4.9E-05 1.1E-09 69.0 6.9 117 197-368 21-138 (139)
77 TIGR01484 HAD-SF-IIB HAD-super 97.7 0.00017 3.6E-09 71.6 10.3 38 200-237 17-54 (204)
78 TIGR01488 HAD-SF-IB Haloacid D 97.7 8.8E-05 1.9E-09 71.6 7.5 41 200-240 73-113 (177)
79 PRK09552 mtnX 2-hydroxy-3-keto 97.7 0.00014 3.1E-09 73.1 9.0 112 199-368 73-184 (219)
80 TIGR01490 HAD-SF-IB-hyp1 HAD-s 97.6 0.00022 4.7E-09 70.6 9.0 111 198-372 85-199 (202)
81 PRK13222 phosphoglycolate phos 97.5 0.0011 2.4E-08 66.6 12.0 43 198-240 91-133 (226)
82 PF05116 S6PP: Sucrose-6F-phos 97.5 0.00027 5.9E-09 72.5 7.3 66 331-396 164-244 (247)
83 PLN02954 phosphoserine phospha 97.3 0.0008 1.7E-08 67.7 9.0 41 200-240 84-124 (224)
84 PRK14501 putative bifunctional 97.3 0.0019 4.2E-08 76.6 13.2 61 331-395 656-721 (726)
85 COG0546 Gph Predicted phosphat 97.2 0.0026 5.6E-08 64.1 11.2 44 198-241 87-130 (220)
86 TIGR01454 AHBA_synth_RP 3-amin 97.1 0.0022 4.7E-08 63.7 9.1 42 199-240 74-115 (205)
87 TIGR01449 PGP_bact 2-phosphogl 96.9 0.0039 8.4E-08 62.0 8.6 42 200-241 85-126 (213)
88 PRK11590 hypothetical protein; 96.8 0.01 2.2E-07 59.3 10.6 108 200-372 95-204 (211)
89 TIGR01545 YfhB_g-proteo haloac 96.7 0.0073 1.6E-07 60.4 9.4 107 200-371 94-202 (210)
90 smart00775 LNS2 LNS2 domain. T 96.7 0.016 3.5E-07 55.1 10.8 34 198-231 25-58 (157)
91 PRK10826 2-deoxyglucose-6-phos 96.7 0.005 1.1E-07 61.9 7.7 43 199-241 91-133 (222)
92 PRK13223 phosphoglycolate phos 96.6 0.0086 1.9E-07 62.4 9.4 42 199-240 100-141 (272)
93 TIGR01548 HAD-SF-IA-hyp1 haloa 96.5 0.0081 1.8E-07 59.2 8.1 49 190-240 98-146 (197)
94 PRK13288 pyrophosphatase PpaX; 96.5 0.0068 1.5E-07 60.5 7.7 41 200-240 82-122 (214)
95 PRK13226 phosphoglycolate phos 96.5 0.012 2.6E-07 59.6 9.2 42 199-240 94-135 (229)
96 TIGR01544 HAD-SF-IE haloacid d 96.5 0.013 2.7E-07 60.8 9.0 48 199-246 120-167 (277)
97 TIGR00685 T6PP trehalose-phosp 96.4 0.026 5.7E-07 57.7 11.0 67 326-394 161-239 (244)
98 PRK11009 aphA acid phosphatase 96.3 0.009 2E-07 60.7 6.8 41 199-239 113-157 (237)
99 PRK13225 phosphoglycolate phos 96.2 0.019 4.2E-07 59.8 8.7 41 200-240 142-182 (273)
100 TIGR03351 PhnX-like phosphonat 96.1 0.023 5E-07 56.9 8.9 42 199-240 86-127 (220)
101 PHA02530 pseT polynucleotide k 96.1 0.016 3.4E-07 61.2 7.8 45 196-240 183-227 (300)
102 TIGR01672 AphA HAD superfamily 96.1 0.01 2.3E-07 60.3 6.0 41 200-240 114-158 (237)
103 COG4359 Uncharacterized conser 96.0 0.025 5.5E-07 53.9 7.6 112 200-369 73-184 (220)
104 TIGR01422 phosphonatase phosph 95.9 0.032 6.9E-07 57.3 9.0 42 200-241 99-140 (253)
105 PRK14988 GMP/IMP nucleotidase; 95.8 0.072 1.6E-06 53.8 10.9 43 199-241 92-134 (224)
106 PLN02770 haloacid dehalogenase 95.8 0.04 8.7E-07 56.5 8.9 43 199-241 107-149 (248)
107 TIGR01428 HAD_type_II 2-haloal 95.8 0.045 9.9E-07 53.8 9.0 41 200-240 92-132 (198)
108 PLN02423 phosphomannomutase 95.7 0.066 1.4E-06 54.9 10.2 39 332-371 189-232 (245)
109 PF06888 Put_Phosphatase: Puta 95.6 0.034 7.3E-07 56.3 7.5 42 200-241 71-114 (234)
110 TIGR02253 CTE7 HAD superfamily 95.6 0.037 8.1E-07 55.3 7.8 42 200-241 94-135 (221)
111 PLN03243 haloacid dehalogenase 95.6 0.047 1E-06 56.5 8.6 42 200-241 109-150 (260)
112 TIGR01990 bPGM beta-phosphoglu 95.5 0.027 5.8E-07 54.6 6.0 40 199-240 86-125 (185)
113 PF13419 HAD_2: Haloacid dehal 95.5 0.036 7.7E-07 52.5 6.7 44 197-240 74-117 (176)
114 PRK13478 phosphonoacetaldehyde 95.3 0.055 1.2E-06 56.1 8.2 41 200-240 101-141 (267)
115 PLN02205 alpha,alpha-trehalose 95.3 0.067 1.5E-06 64.2 9.9 46 200-245 616-665 (854)
116 TIGR01509 HAD-SF-IA-v3 haloaci 95.2 0.1 2.3E-06 50.1 9.2 42 199-241 84-125 (183)
117 COG3769 Predicted hydrolase (H 95.0 0.6 1.3E-05 46.1 13.2 37 204-240 27-63 (274)
118 TIGR01662 HAD-SF-IIIA HAD-supe 94.9 0.048 1E-06 49.9 5.6 41 199-239 24-72 (132)
119 TIGR02009 PGMB-YQAB-SF beta-ph 94.9 0.045 9.8E-07 52.9 5.7 40 199-240 87-126 (185)
120 PRK11587 putative phosphatase; 94.8 0.1 2.2E-06 52.2 8.2 40 200-239 83-122 (218)
121 TIGR01685 MDP-1 magnesium-depe 94.7 0.17 3.6E-06 49.0 8.8 51 190-240 35-86 (174)
122 PLN02575 haloacid dehalogenase 94.6 0.13 2.8E-06 55.9 8.8 43 199-241 215-257 (381)
123 PRK06698 bifunctional 5'-methy 94.6 0.055 1.2E-06 60.8 6.1 43 199-241 329-371 (459)
124 PLN02779 haloacid dehalogenase 94.5 0.15 3.3E-06 53.5 8.8 39 200-238 144-182 (286)
125 PRK08942 D,D-heptose 1,7-bisph 94.1 0.17 3.7E-06 49.1 7.8 27 200-226 29-55 (181)
126 PLN03017 trehalose-phosphatase 94.1 0.72 1.6E-05 49.8 12.9 62 331-394 282-355 (366)
127 TIGR02252 DREG-2 REG-2-like, H 94.1 0.16 3.4E-06 50.1 7.4 40 200-240 105-144 (203)
128 TIGR01549 HAD-SF-IA-v1 haloaci 93.9 0.16 3.5E-06 47.6 6.9 40 198-237 62-101 (154)
129 PRK06769 hypothetical protein; 93.7 0.18 3.8E-06 48.8 6.8 28 200-227 28-55 (173)
130 TIGR01656 Histidinol-ppas hist 93.7 0.18 3.9E-06 47.2 6.7 41 200-240 27-82 (147)
131 PLN02940 riboflavin kinase 93.7 0.16 3.4E-06 55.7 7.1 42 199-240 92-134 (382)
132 PLN02580 trehalose-phosphatase 93.6 0.13 2.8E-06 55.8 6.2 63 331-395 300-374 (384)
133 TIGR02254 YjjG/YfnB HAD superf 93.5 0.34 7.4E-06 48.3 8.9 42 199-241 96-137 (224)
134 KOG3120|consensus 93.5 0.23 4.9E-06 49.0 7.1 41 200-240 84-125 (256)
135 TIGR01533 lipo_e_P4 5'-nucleot 93.0 0.39 8.5E-06 49.7 8.5 43 198-240 116-161 (266)
136 TIGR01668 YqeG_hyp_ppase HAD s 92.9 0.34 7.4E-06 46.6 7.5 40 200-239 43-83 (170)
137 TIGR01459 HAD-SF-IIA-hyp4 HAD- 92.5 1.2 2.6E-05 45.4 11.2 48 193-240 17-66 (242)
138 PRK09449 dUMP phosphatase; Pro 92.5 0.59 1.3E-05 46.8 8.9 40 200-240 95-134 (224)
139 TIGR01261 hisB_Nterm histidino 92.5 0.26 5.7E-06 47.0 5.9 26 200-225 29-54 (161)
140 smart00577 CPDc catalytic doma 92.4 0.14 3.1E-06 48.0 4.0 43 197-240 42-84 (148)
141 TIGR01691 enolase-ppase 2,3-di 92.3 0.31 6.7E-06 49.1 6.4 41 197-237 92-132 (220)
142 PLN02811 hydrolase 92.3 0.43 9.3E-06 47.8 7.5 33 198-230 76-108 (220)
143 TIGR01675 plant-AP plant acid 92.3 0.36 7.7E-06 48.7 6.8 42 199-240 119-163 (229)
144 TIGR02247 HAD-1A3-hyp Epoxide 91.5 0.32 7E-06 48.2 5.5 30 199-228 93-122 (211)
145 TIGR01664 DNA-3'-Pase DNA 3'-p 91.3 0.94 2E-05 43.4 8.3 38 202-239 44-93 (166)
146 TIGR01681 HAD-SF-IIIC HAD-supe 91.1 0.73 1.6E-05 42.1 7.1 39 200-238 29-68 (128)
147 PRK05446 imidazole glycerol-ph 90.8 0.7 1.5E-05 49.9 7.5 26 199-224 29-54 (354)
148 PLN02645 phosphoglycolate phos 90.8 0.75 1.6E-05 48.9 7.8 47 193-239 37-86 (311)
149 PF13344 Hydrolase_6: Haloacid 89.9 0.43 9.2E-06 41.8 4.2 56 192-247 6-64 (101)
150 PHA02597 30.2 hypothetical pro 89.2 0.9 1.9E-05 44.5 6.4 39 200-239 74-112 (197)
151 TIGR00213 GmhB_yaeD D,D-heptos 88.1 1.6 3.5E-05 42.0 7.3 27 200-226 26-52 (176)
152 COG0241 HisB Histidinol phosph 88.1 1.2 2.6E-05 43.2 6.2 34 333-366 108-144 (181)
153 PF13246 Hydrolase_like2: Puta 88.0 0.25 5.5E-06 42.3 1.4 50 81-130 1-68 (91)
154 TIGR01458 HAD-SF-IIA-hyp3 HAD- 88.0 0.73 1.6E-05 47.5 5.1 55 193-247 10-71 (257)
155 PRK09456 ?-D-glucose-1-phospha 88.0 1.6 3.4E-05 43.0 7.2 31 200-230 84-114 (199)
156 TIGR01457 HAD-SF-IIA-hyp2 HAD- 87.5 1.1 2.4E-05 46.0 5.9 58 193-250 10-70 (249)
157 PLN02919 haloacid dehalogenase 86.5 2.5 5.5E-05 52.5 9.3 41 200-240 161-201 (1057)
158 TIGR01993 Pyr-5-nucltdase pyri 84.7 2.8 6E-05 40.5 7.0 39 200-241 84-122 (184)
159 PLN02151 trehalose-phosphatase 84.6 10 0.00022 40.9 11.6 62 331-394 268-341 (354)
160 PRK10444 UMP phosphatase; Prov 84.6 1.4 2.9E-05 45.3 4.9 55 193-247 10-67 (248)
161 TIGR01686 FkbH FkbH-like domai 84.2 2.6 5.6E-05 45.0 7.0 37 200-236 31-67 (320)
162 COG2179 Predicted hydrolase of 84.0 3.5 7.7E-05 39.2 6.8 39 201-239 47-85 (175)
163 PF03767 Acid_phosphat_B: HAD 83.9 3.7 8E-05 41.6 7.6 42 199-240 114-158 (229)
164 TIGR01684 viral_ppase viral ph 82.6 3.7 8E-05 42.9 7.0 41 201-241 146-187 (301)
165 PF08235 LNS2: LNS2 (Lipin/Ned 81.8 7.6 0.00016 36.8 8.3 34 199-232 26-59 (157)
166 PRK10725 fructose-1-P/6-phosph 81.3 4.3 9.4E-05 39.1 6.8 39 201-241 89-127 (188)
167 PRK10563 6-phosphogluconate ph 80.4 3.8 8.2E-05 40.8 6.3 39 199-240 87-125 (221)
168 TIGR01689 EcbF-BcbF capsule bi 79.8 1.9 4E-05 39.4 3.3 33 199-231 23-55 (126)
169 PHA03398 viral phosphatase sup 77.7 5.6 0.00012 41.7 6.4 41 201-241 148-189 (303)
170 TIGR01452 PGP_euk phosphoglyco 74.2 6.1 0.00013 41.2 5.9 56 193-248 11-69 (279)
171 COG4030 Uncharacterized protei 72.7 7 0.00015 38.9 5.3 69 331-399 190-270 (315)
172 PF09419 PGP_phosphatase: Mito 71.2 13 0.00027 35.8 6.7 42 198-239 57-107 (168)
173 KOG0208|consensus 69.7 3.2 7E-05 49.4 2.7 49 1-53 554-604 (1140)
174 PLN02177 glycerol-3-phosphate 68.5 30 0.00066 39.2 10.1 43 330-372 174-216 (497)
175 PRK10748 flavin mononucleotide 68.0 13 0.00028 37.7 6.5 29 199-228 112-140 (238)
176 PF13380 CoA_binding_2: CoA bi 67.2 8.4 0.00018 34.5 4.3 86 148-239 17-103 (116)
177 TIGR01680 Veg_Stor_Prot vegeta 64.4 47 0.001 34.5 9.6 30 199-228 144-173 (275)
178 COG0637 Predicted phosphatase/ 62.1 15 0.00032 36.9 5.6 43 199-241 85-127 (221)
179 cd02071 MM_CoA_mut_B12_BD meth 61.5 23 0.00049 31.9 6.1 83 150-239 19-103 (122)
180 COG0647 NagD Predicted sugar p 59.3 12 0.00026 38.9 4.3 46 191-236 15-60 (269)
181 PRK02261 methylaspartate mutas 58.2 29 0.00063 32.1 6.3 82 151-239 24-113 (137)
182 PF14163 SieB: Superinfection 57.0 23 0.00049 33.3 5.5 46 565-611 9-55 (151)
183 TIGR01501 MthylAspMutase methy 55.4 41 0.00088 31.1 6.7 82 151-239 22-111 (134)
184 cd02072 Glm_B12_BD B12 binding 55.0 28 0.0006 31.9 5.4 80 153-239 22-109 (128)
185 TIGR01460 HAD-SF-IIA Haloacid 54.7 25 0.00053 35.7 5.7 48 193-240 7-58 (236)
186 cd02067 B12-binding B12 bindin 54.6 37 0.00081 30.1 6.3 83 150-239 19-103 (119)
187 TIGR01663 PNK-3'Pase polynucle 52.1 47 0.001 38.0 7.9 39 201-239 198-248 (526)
188 TIGR02244 HAD-IG-Ncltidse HAD 51.5 1.3E+02 0.0029 32.4 10.8 38 201-238 185-223 (343)
189 TIGR00640 acid_CoA_mut_C methy 49.1 45 0.00098 30.6 6.0 83 151-240 23-107 (132)
190 COG1011 Predicted hydrolase (H 48.8 62 0.0013 31.9 7.6 49 198-247 97-145 (229)
191 TIGR02370 pyl_corrinoid methyl 48.4 32 0.0007 33.9 5.2 82 150-240 104-188 (197)
192 PF12689 Acid_PPase: Acid Phos 47.7 29 0.00063 33.4 4.6 42 199-240 44-86 (169)
193 cd02070 corrinoid_protein_B12- 47.5 38 0.00081 33.4 5.6 82 150-239 102-185 (201)
194 COG5012 Predicted cobalamin bi 45.8 26 0.00057 35.0 4.0 84 150-240 124-208 (227)
195 TIGR01493 HAD-SF-IA-v2 Haloaci 42.4 34 0.00073 32.4 4.3 34 200-240 90-123 (175)
196 COG1877 OtsB Trehalose-6-phosp 40.6 3E+02 0.0065 28.6 11.0 46 320-365 170-219 (266)
197 PF11286 DUF3087: Protein of u 40.2 52 0.0011 31.4 4.9 33 575-609 36-68 (165)
198 PTZ00445 p36-lilke protein; Pr 40.0 58 0.0013 32.5 5.4 75 144-227 28-102 (219)
199 KOG3040|consensus 39.4 55 0.0012 32.5 5.0 56 189-244 12-70 (262)
200 TIGR01675 plant-AP plant acid 37.0 55 0.0012 33.1 4.9 72 147-228 125-207 (229)
201 PRK08508 biotin synthase; Prov 36.7 1.6E+02 0.0034 30.7 8.5 92 144-241 42-153 (279)
202 PRK12581 oxaloacetate decarbox 36.7 3.1E+02 0.0068 30.9 11.2 97 144-240 34-147 (468)
203 TIGR03351 PhnX-like phosphonat 36.3 1.8E+02 0.0038 28.6 8.5 91 143-240 88-185 (220)
204 TIGR01662 HAD-SF-IIIA HAD-supe 35.6 2.3E+02 0.0049 25.3 8.5 94 143-240 26-126 (132)
205 TIGR01458 HAD-SF-IIA-hyp3 HAD- 35.1 44 0.00095 34.3 4.0 26 344-369 196-222 (257)
206 PRK10444 UMP phosphatase; Prov 33.8 2E+02 0.0043 29.4 8.6 27 344-370 191-218 (248)
207 TIGR02468 sucrsPsyn_pln sucros 33.6 2.4E+02 0.0052 35.1 10.3 40 332-371 956-1002(1050)
208 cd01391 Periplasmic_Binding_Pr 33.4 3.5E+02 0.0076 26.1 10.3 104 146-250 111-217 (269)
209 COG3700 AphA Acid phosphatase 32.7 67 0.0015 31.0 4.3 39 201-239 115-157 (237)
210 cd02069 methionine_synthase_B1 31.6 46 0.00099 33.3 3.3 72 152-230 110-181 (213)
211 PF08645 PNK3P: Polynucleotide 31.3 42 0.0009 31.8 2.9 23 201-223 30-52 (159)
212 TIGR02250 FCP1_euk FCP1-like p 30.1 77 0.0017 29.9 4.5 45 195-240 53-97 (156)
213 cd03409 Chelatase_Class_II Cla 30.0 1.2E+02 0.0025 25.7 5.3 28 194-221 36-63 (101)
214 cd05017 SIS_PGI_PMI_1 The memb 29.6 64 0.0014 28.7 3.7 36 201-238 55-90 (119)
215 PLN03063 alpha,alpha-trehalose 29.2 2.9E+02 0.0062 33.6 10.0 36 201-236 533-569 (797)
216 TIGR01454 AHBA_synth_RP 3-amin 29.1 2.6E+02 0.0057 27.0 8.3 89 144-239 77-169 (205)
217 PF08510 PIG-P: PIG-P; InterP 28.7 1.9E+02 0.0041 26.3 6.6 55 553-608 7-63 (126)
218 TIGR02247 HAD-1A3-hyp Epoxide 28.7 3.9E+02 0.0084 25.9 9.5 90 144-239 96-190 (211)
219 PRK09490 metH B12-dependent me 28.6 54 0.0012 41.3 3.9 78 153-237 774-851 (1229)
220 PF06941 NT5C: 5' nucleotidase 27.9 50 0.0011 32.1 2.9 41 200-240 73-121 (191)
221 TIGR02251 HIF-SF_euk Dullard-l 27.6 94 0.002 29.4 4.6 44 196-240 38-81 (162)
222 TIGR02253 CTE7 HAD superfamily 27.3 3.1E+02 0.0066 26.8 8.5 91 144-240 96-190 (221)
223 COG2185 Sbm Methylmalonyl-CoA 27.2 87 0.0019 29.2 4.0 71 150-227 32-103 (143)
224 TIGR00676 fadh2 5,10-methylene 26.3 1.6E+02 0.0034 30.6 6.4 84 144-228 14-99 (272)
225 PF13419 HAD_2: Haloacid dehal 25.9 3.2E+02 0.007 24.9 8.0 89 145-240 80-172 (176)
226 PF14336 DUF4392: Domain of un 25.9 43 0.00094 35.2 2.1 38 202-239 62-100 (291)
227 PRK12330 oxaloacetate decarbox 25.8 5.8E+02 0.012 29.1 11.0 97 144-240 26-139 (499)
228 PF12017 Tnp_P_element: Transp 25.8 1.1E+02 0.0023 31.2 4.8 36 206-241 199-234 (236)
229 TIGR01668 YqeG_hyp_ppase HAD s 24.5 2.2E+02 0.0047 27.1 6.6 85 143-239 44-130 (170)
230 cd05014 SIS_Kpsf KpsF-like pro 24.1 70 0.0015 28.5 2.9 32 199-230 57-88 (128)
231 PF10686 DUF2493: Protein of u 23.9 1.7E+02 0.0037 23.8 4.7 53 157-239 2-58 (71)
232 cd00860 ThrRS_anticodon ThrRS 23.7 1.1E+02 0.0023 25.2 3.8 43 197-239 9-52 (91)
233 PF06399 GFRP: GTP cyclohydrol 23.6 90 0.0019 26.0 3.0 20 148-167 53-72 (83)
234 TIGR02329 propionate_PrpR prop 23.3 2E+02 0.0043 33.0 6.9 82 145-240 84-165 (526)
235 cd01019 ZnuA Zinc binding prot 23.2 1.6E+02 0.0036 30.6 5.9 53 187-239 196-252 (286)
236 PF05297 Herpes_LMP1: Herpesvi 23.0 28 0.0006 35.9 0.0 10 492-501 94-103 (381)
237 PF13242 Hydrolase_like: HAD-h 22.9 49 0.0011 26.7 1.5 26 344-369 21-47 (75)
238 cd05008 SIS_GlmS_GlmD_1 SIS (S 22.2 82 0.0018 27.9 3.0 28 201-228 58-85 (126)
239 TIGR01656 Histidinol-ppas hist 22.1 3.5E+02 0.0075 24.8 7.3 96 144-240 29-140 (147)
240 TIGR01459 HAD-SF-IIA-hyp4 HAD- 22.1 61 0.0013 32.8 2.3 23 345-367 214-237 (242)
241 PF02009 Rifin_STEVOR: Rifin/s 21.9 95 0.002 32.8 3.7 18 622-639 282-299 (299)
242 PRK10747 putative protoheme IX 21.8 1.6E+02 0.0035 32.3 5.7 7 619-625 70-76 (398)
243 cd04906 ACT_ThrD-I_1 First of 21.8 72 0.0016 26.6 2.3 66 142-226 10-76 (85)
244 COG0279 GmhA Phosphoheptose is 21.7 2.1E+02 0.0045 27.5 5.4 57 146-234 98-154 (176)
245 PF02358 Trehalose_PPase: Treh 21.6 97 0.0021 31.2 3.7 63 322-384 155-233 (235)
246 TIGR01428 HAD_type_II 2-haloal 20.9 3.7E+02 0.008 25.8 7.6 89 145-240 95-187 (198)
247 PTZ00359 hypothetical protein; 20.9 1E+03 0.022 26.2 11.0 30 636-666 401-431 (443)
248 TIGR02082 metH 5-methyltetrahy 20.8 1.1E+02 0.0023 38.8 4.4 78 153-237 755-832 (1178)
249 PRK14042 pyruvate carboxylase 20.3 3.6E+02 0.0078 31.5 8.2 97 144-240 25-138 (596)
250 COG1060 ThiH Thiamine biosynth 20.2 1.6E+02 0.0035 32.1 5.1 86 144-229 92-184 (370)
251 cd03174 DRE_TIM_metallolyase D 20.1 8.6E+02 0.019 24.4 10.5 27 144-170 18-44 (265)
252 TIGR03551 F420_cofH 7,8-dideme 20.0 3.2E+02 0.0069 29.3 7.4 98 144-241 72-195 (343)
No 1
>KOG0208|consensus
Probab=100.00 E-value=5.2e-116 Score=970.36 Aligned_cols=566 Identities=42% Similarity=0.681 Sum_probs=505.5
Q ss_pred CCCcCCceEEEEEEcCCCCcCcc--------------cccc--ccccchHHHHHHHhhcccceecCCcccCCHHHHHHHH
Q psy6090 41 EDSRKTRHYASVVPLQGKKLGAP--------------IKHI--QNTNEHVKLKHGMATCHSLTLINGELSGDPLDLKMFE 104 (674)
Q Consensus 41 ~~te~gld~~g~~~~~~~~f~~~--------------~~~~--~~~~~~~~~~~~~a~Chsl~~~~~~l~Gdpld~~m~~ 104 (674)
++||||||+|||+|.+++....+ +... ..+|+ .++..+||+||||+.+||+++|||||++||+
T Consensus 478 TLTEdGLDl~gv~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~a~atCHSL~~v~g~l~GDPLdlkmfe 556 (1140)
T KOG0208|consen 478 TLTEDGLDLWGVVPVERNVDDGPELKVVTEDSLQLFYKLSLRSSSLPM-GNLVAAMATCHSLTLVDGTLVGDPLDLKMFE 556 (1140)
T ss_pred cccccceeEEEEEeccccccccchhhhhhhhhccceeeccccccCCch-HHHHHHHhhhceeEEeCCeeccCceeeeeee
Confidence 48999999999999875432221 1111 33455 7899999999999999999999999999999
Q ss_pred HcCcEEeCCC--CcccCCCCCccceEecCCCC-----------------------Ccc--ccc-----------------
Q psy6090 105 STGWTLEEPN--LKEDCHYELPIPAIVRPPSG-----------------------DYQ--SVL----------------- 140 (674)
Q Consensus 105 ~t~~~l~~~~--~~~~~~~~~~~~~v~~~~~~-----------------------~lq--svi----------------- 140 (674)
++||.++|.+ .++...|+..+|+++||+.+ +|| |||
T Consensus 557 ~t~w~~ee~~~~~~~~~~~~~~~p~v~~p~~~~~~~~t~~~~~~~si~k~feF~S~LrRMSVIv~~~~e~~~~~ftKGaP 636 (1140)
T KOG0208|consen 557 STGWVYEEADIEDEATREFNTLIPTVVRPPENAFNQSTECGEGEISIVKQFEFSSALRRMSVIVSTGGEDKMMVFTKGAP 636 (1140)
T ss_pred ccceEEEeccccchhhhhhCCccCCEeCCCcccccCCCcCCCcceEEEEecccchhhheEEEEEecCCCCceEeeccCCH
Confidence 9999997753 23445677778888886542 155 776
Q ss_pred ---------cccchHHHHHHHHHhhcCcEEEEEeeecccccchHHHhhhchhhhcccceeeeeehhccCCCcchHHHHHH
Q psy6090 141 ---------ISVPENIVSVLSEYTEQGYRVIALASRTLSIDDYKHLNYMKREDIEKDLEFLGLIILENRLKPQTEGVIKE 211 (674)
Q Consensus 141 ---------~~~p~~~~~~l~~~~~~G~Rvla~A~k~l~~~~~~~~~~~~r~~iE~dL~flGli~~en~lk~~t~~~I~~ 211 (674)
+++|+||.++++.|+++||||||+|+|.|+...|.+.++++||.+|+||+|+|+++|||+||++|+++|++
T Consensus 637 E~I~~ic~p~tvP~dy~evl~~Yt~~GfRVIAlA~K~L~~~~~~~~~~~~Rd~vEs~l~FlGLiVmeNkLK~~T~~VI~e 716 (1140)
T KOG0208|consen 637 ESIAEICKPETVPADYQEVLKEYTHQGFRVIALASKELETSTLQKAQKLSRDTVESNLEFLGLIVMENKLKEETKRVIDE 716 (1140)
T ss_pred HHHHHhcCcccCCccHHHHHHHHHhCCeEEEEEecCccCcchHHHHhhccHhhhhccceeeEEEEeecccccccHHHHHH
Confidence 78999999999999999999999999999966799999999999999999999999999999999999999
Q ss_pred HHhcCCeEEEEcCCCHhhHHHHHHHcCCCCCCCeEEEEeCCCCCCCCCCceEEEEcCcchhhhhhhhccC---Cchhhhh
Q psy6090 212 LKDARVKVVMITGDNIQTAISVAKECGIIDPGETVVDVSAVPGGLKECPKVYFTVSGVSAIQTKAKKLNY---SKTEEEL 288 (674)
Q Consensus 212 L~~agIrvvmiTGDn~~TA~~vA~~~gi~~~~~~vi~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~---~~~~~~~ 288 (674)
|++|+||++|+||||.+||++|||+|||+.+..+++..+..+++.....++.|...+++.........+. .....-.
T Consensus 717 L~~AnIRtVMcTGDNllTaisVakeCgmi~p~~~v~~~~~~~~~~~~~~~i~w~~ve~~~~~~~~~~~~~~~~~~~~~~d 796 (1140)
T KOG0208|consen 717 LNRANIRTVMCTGDNLLTAISVAKECGMIEPQVKVIIPELEPPEDDSIAQIVWLCVESQTQFLDPKEPDPDLASVKLSLD 796 (1140)
T ss_pred HHhhcceEEEEcCCchheeeehhhcccccCCCCeEEEEeccCCccCCCceeEEEEccCccccCCCCccCccccCCccChh
Confidence 9999999999999999999999999999999999999999988888899999999998776644333221 0010112
Q ss_pred ccCCCCeEEEEcchhHHHHHhhCchhHHHHHhhccEEEecCHHHHHHHHHHHHHcCCEEEEeCCCccchhhhhhCCccee
Q psy6090 289 GLSSGAYKFAVTGKSWELIRDQMPELIPRIIVKGAIFARMSSDQKQQLVLELQQLGYYVAMCGDGANDCGALRAAHAGIS 368 (674)
Q Consensus 289 ~~~~~~~~l~itG~~~~~i~~~~~~~~~~i~~~~~VfaR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~aLk~AdvGIa 368 (674)
......|+++++|+.|+.+.+++++++++++.++.|||||+|+||.++|+.+|+.||.|+|||||||||+|||+||||||
T Consensus 797 ~~~~~~yhlA~sG~~f~~i~~~~~~l~~~Il~~~~VfARMsP~qK~~Lie~lQkl~y~VgfCGDGANDCgALKaAdvGIS 876 (1140)
T KOG0208|consen 797 VLSEKDYHLAMSGKTFQVILEHFPELVPKILLKGTVFARMSPDQKAELIEALQKLGYKVGFCGDGANDCGALKAADVGIS 876 (1140)
T ss_pred hhccceeEEEecCchhHHHHhhcHHHHHHHHhcCeEEeecCchhHHHHHHHHHhcCcEEEecCCCcchhhhhhhcccCcc
Confidence 23457899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCccccccCccccccchhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHH
Q psy6090 369 LSEAESSVASPFTSTVANISCVLRIIREGRAALVTSFGIFKFMVLYSLCEFFSTMILYTIDSNLTDFEFLYIDIALVVNF 448 (674)
Q Consensus 369 ms~aeasvAAdf~s~~~~i~~V~~~I~eGR~~l~ts~~~~k~~~~~~l~~~~~~~~l~~~~~~l~~~q~L~idl~~~~~~ 448 (674)
+|++|||+||||||+.++|+||+++|+||||+|+|||.+||||++|+++||+++.+||+...+++|.|+|++|+++++++
T Consensus 877 LSeaEASvAApFTSk~~~I~cVp~vIrEGRaALVTSf~~FkYMalYs~iqFisv~~LY~~~~nl~D~Qfl~iDLlii~pi 956 (1140)
T KOG0208|consen 877 LSEAEASVAAPFTSKTPSISCVPDVIREGRAALVTSFACFKYMALYSAIQFISVVFLYLINSNLGDLQFLFIDLLIITPI 956 (1140)
T ss_pred hhhhhHhhcCccccCCCchhhHhHHHhhhhhhhhhhHHHHHHHHHHHHHHHHhhheeeeecccccchhhhhhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHccCCCCCCCCcCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccCCCCccCcchhhHHHHHHH
Q psy6090 449 AFFFGRNHAFSGPLTSETPLNSLFSYVTLLSMFFQLILMVSMQIISFIIVHKFAWFEPFVYTNAISYSCYENYAVFSISM 528 (674)
Q Consensus 449 ~~~l~~~~p~~~~L~~~~P~~~l~s~~~~~si~~q~~i~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~t~~f~~~~ 528 (674)
|++|++++|+. +|.+.||+.+|++++.+.++++|.++..++|++.++++..||||.|+.+...++..++++|++|++++
T Consensus 957 a~~m~~~~a~~-~L~~~rP~~~L~s~~~~~~l~~q~vli~l~q~i~~l~~~~qpw~~pp~~~~~~nt~s~~~T~lF~vS~ 1035 (1140)
T KOG0208|consen 957 AVMMSRFDASD-KLFPKRPPTNLLSKKILVPLLLQIVLICLVQWILTLIVEPQPWYEPPNPQVDDNTQSSDNTSLFFVSS 1035 (1140)
T ss_pred HHHHccCcHHH-HhcCCCCCccccccchhhhhHHHHHHHHHHHHhhheeeccccceecCCCCcCcccccceeeEeeehhH
Confidence 99999999999 99999999999999999999999999999999999999999999987765567889999999999999
Q ss_pred HHHHHHHHHhcCCCCcccccccchhHHHHHHHHHHHHHHhhcccchh-hhhcceecCCCCCcHHHHHHHHHHHHHHHHHH
Q psy6090 529 FQYIILAITFSQGKPYRTPIYKNKLFILSIIIMTWVCIYITLIPSEF-IIQFLQLRFPPNMQFPLIVIYLAICNFVLSLF 607 (674)
Q Consensus 529 ~q~~~~~~v~s~g~pfr~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~l~~~p~~~~~~~l~~~~~~~~~~~~~ 607 (674)
|||+.++++.++|+|||+|+++|+.|...+.++.+..+++.+..... ....+++...|...+++.++++.+.+++..++
T Consensus 1036 fqYi~~a~v~S~g~pfr~pl~~n~~f~~~i~~i~~~~i~l~~~~~~~~~~~l~~~t~~~~~~~~fii~~~~~~~~~~~~~ 1115 (1140)
T KOG0208|consen 1036 FQYIFIALVLSKGSPFRRPLWKNVLFKVFITVIILSTIYLLFVNYLFIEWKLLQLTYIPTTFDRFIILLVVISYFALNYI 1115 (1140)
T ss_pred HHHHHhheeeccCCcccCchhcCceeeeehhhHHhhhhhhhhccccchhhhhhceeccCcchhHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999888888777777776655433 23678999999668888888888888877666
Q ss_pred H
Q psy6090 608 I 608 (674)
Q Consensus 608 ~ 608 (674)
.
T Consensus 1116 ~ 1116 (1140)
T KOG0208|consen 1116 Q 1116 (1140)
T ss_pred h
Confidence 5
No 2
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=100.00 E-value=4.6e-88 Score=813.51 Aligned_cols=578 Identities=38% Similarity=0.602 Sum_probs=480.3
Q ss_pred CCcccccccccccCCCCCCccccCCC--CCcCCceEEEEEEcCCCCcC-ccccccccccchHHHHHHHhhcccceecCCc
Q psy6090 16 EDCHYELPIPAIVRPPSDSQAYENHE--DSRKTRHYASVVPLQGKKLG-APIKHIQNTNEHVKLKHGMATCHSLTLINGE 92 (674)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~te~gld~~g~~~~~~~~f~-~~~~~~~~~~~~~~~~~~~a~Chsl~~~~~~ 92 (674)
..+.+-...+.+..+..-....-+++ +||++|++.|+.+..++.+. ....+...... ..+..+||+||+++..+|+
T Consensus 431 k~~il~~~~~~ie~lG~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~a~C~~~~~~~~~ 509 (1054)
T TIGR01657 431 KKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEFLKIVTEDSSLKP-SITHKALATCHSLTKLEGK 509 (1054)
T ss_pred HCCEEEcCcccceecceeeEEEEcCCCCCccCCeeEEeEecccCccccccccccccccCc-hHHHHHHHhCCeeEEECCE
Confidence 34444444455555555444444444 99999999999987654332 11111111222 5678899999999999999
Q ss_pred ccCCHHHHHHHHHcCcEEeCC-CCc---------------------ccCCCC---CccceEecCCC-CC----cc---cc
Q psy6090 93 LSGDPLDLKMFESTGWTLEEP-NLK---------------------EDCHYE---LPIPAIVRPPS-GD----YQ---SV 139 (674)
Q Consensus 93 l~Gdpld~~m~~~t~~~l~~~-~~~---------------------~~~~~~---~~~~~v~~~~~-~~----lq---sv 139 (674)
++|||+|.+|+++++|.+++. +.. ...+|+ ++|+++++..+ +. .+ .+
T Consensus 510 ~~Gdp~E~al~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~S~~krMsvvv~~~~~~~~~~~~KGApE~ 589 (1054)
T TIGR01657 510 LVGDPLDKKMFEATGWTLEEDDESAEPTSILAVVRTDDPPQELSIIRRFQFSSALQRMSVIVSTNDERSPDAFVKGAPET 589 (1054)
T ss_pred EecCHHHHHHHHhCCCEEECCCCcccccccccceeccCCCceEEEEEEEeecCCCCEEEEEEEEcCCCeEEEEEECCHHH
Confidence 999999999999999998762 110 112454 36888887322 11 11 11
Q ss_pred c------cccchHHHHHHHHHhhcCcEEEEEeeecccccchHHHhhhchhhhcccceeeeeehhccCCCcchHHHHHHHH
Q psy6090 140 L------ISVPENIVSVLSEYTEQGYRVIALASRTLSIDDYKHLNYMKREDIEKDLEFLGLIILENRLKPQTEGVIKELK 213 (674)
Q Consensus 140 i------~~~p~~~~~~l~~~~~~G~Rvla~A~k~l~~~~~~~~~~~~r~~iE~dL~flGli~~en~lk~~t~~~I~~L~ 213 (674)
| +++|++|++.++.|+++|+||||+|||++++.++.+..+++|+++|+||+|+|+++|+||+||+++++|++|+
T Consensus 590 Il~~c~~~~~p~~~~~~~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~~~E~~L~flGli~~~d~lr~~~~~~I~~l~ 669 (1054)
T TIGR01657 590 IQSLCSPETVPSDYQEVLKSYTREGYRVLALAYKELPKLTLQKAQDLSRDAVESNLTFLGFIVFENPLKPDTKEVIKELK 669 (1054)
T ss_pred HHHHcCCcCCChhHHHHHHHHHhcCCEEEEEEEeecCccchhhhhhccHHHHhcCceEEEEEEEecCCCccHHHHHHHHH
Confidence 1 4789999999999999999999999999985556666678899999999999999999999999999999999
Q ss_pred hcCCeEEEEcCCCHhhHHHHHHHcCCCCCCCeEEEEeCCCCCCCCCCceEEEEcCcchhhhhhhhccCC-chhhhhccCC
Q psy6090 214 DARVKVVMITGDNIQTAISVAKECGIIDPGETVVDVSAVPGGLKECPKVYFTVSGVSAIQTKAKKLNYS-KTEEELGLSS 292 (674)
Q Consensus 214 ~agIrvvmiTGDn~~TA~~vA~~~gi~~~~~~vi~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 292 (674)
+||||++|+||||+.||.+||++|||++++..++..+....+......+.|...+.............. ..........
T Consensus 670 ~agi~v~miTGD~~~TA~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 749 (1054)
T TIGR01657 670 RASIRTVMITGDNPLTAVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLA 749 (1054)
T ss_pred HCCCeEEEECCCCHHHHHHHHHHcCCCCCCceEEEeecccccCCCCceEEEEecCccccccccccccCcccccchhhhcc
Confidence 999999999999999999999999999887788877765555455567888877654221100000000 0000111123
Q ss_pred CCeEEEEcchhHHHHHhhCchhHHHHHhhccEEEecCHHHHHHHHHHHHHcCCEEEEeCCCccchhhhhhCCcceeecCC
Q psy6090 293 GAYKFAVTGKSWELIRDQMPELIPRIIVKGAIFARMSSDQKQQLVLELQQLGYYVAMCGDGANDCGALRAAHAGISLSEA 372 (674)
Q Consensus 293 ~~~~l~itG~~~~~i~~~~~~~~~~i~~~~~VfaR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~aLk~AdvGIams~a 372 (674)
..+.++++|+.++.+.++.++++.+++.++.|||||+|+||.++|+.+|+.|++|+|||||+|||+|||+|||||||+++
T Consensus 750 ~~~~~~itG~~l~~l~~~~~~~l~~~~~~~~VfAR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~ALK~AdVGIam~~~ 829 (1054)
T TIGR01657 750 SRYHLAMSGKAFAVLQAHSPELLLRLLSHTTVFARMAPDQKETLVELLQKLDYTVGMCGDGANDCGALKQADVGISLSEA 829 (1054)
T ss_pred cceEEEEEcHHHHHHHHhhHHHHHHHHhcCeEEEecCHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHhcCcceeeccc
Confidence 56789999999999887777889999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCccccccchhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHH
Q psy6090 373 ESSVASPFTSTVANISCVLRIIREGRAALVTSFGIFKFMVLYSLCEFFSTMILYTIDSNLTDFEFLYIDIALVVNFAFFF 452 (674)
Q Consensus 373 easvAAdf~s~~~~i~~V~~~I~eGR~~l~ts~~~~k~~~~~~l~~~~~~~~l~~~~~~l~~~q~L~idl~~~~~~~~~l 452 (674)
|+++||||++++++++||+++|+|||+++++++++|||+++|+++++++++++|..+.+++++|+||+|++++++++++|
T Consensus 830 das~AA~f~l~~~~~~~I~~~I~eGR~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~Q~l~i~li~~~~~~l~l 909 (1054)
T TIGR01657 830 EASVAAPFTSKLASISCVPNVIREGRCALVTSFQMFKYMALYSLIQFYSVSILYLIGSNLGDGQFLTIDLLLIFPVALLM 909 (1054)
T ss_pred cceeecccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcCccHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCcCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccC--CCCccCcchhhHHHHHHHHH
Q psy6090 453 GRNHAFSGPLTSETPLNSLFSYVTLLSMFFQLILMVSMQIISFIIVHKFAWFEPFVYT--NAISYSCYENYAVFSISMFQ 530 (674)
Q Consensus 453 ~~~~p~~~~L~~~~P~~~l~s~~~~~si~~q~~i~~~~~~~~~~~~~~~~w~~~~~~~--~~~~~~~~~~t~~f~~~~~q 530 (674)
++++|.+ +|+++||..+++++.++.++++|+++++++++.+|+++..++||.+..+. +.++.++++||++|+++++|
T Consensus 910 ~~~~p~~-~l~~~~P~~~l~~~~~~~si~~q~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~T~~f~~~~~~ 988 (1054)
T TIGR01657 910 SRNKPLK-KLSKERPPSNLFSVYILTSVLIQFVLHILSQVYLVFELHAQPWYKPENPVDLEKENFPNLLNTVLFFVSSFQ 988 (1054)
T ss_pred HcCCchh-hcCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCCcccccCccHHHHHHHHHHHHH
Confidence 9999999 99999999999999999999999999999999999999999999765432 23567789999999999999
Q ss_pred HHHHHHHhcCCCCcccccccchhHHHHHHHHHHHHHHhhcccchhhhhcceecCCCCCcHHHHHHH
Q psy6090 531 YIILAITFSQGKPYRTPIYKNKLFILSIIIMTWVCIYITLIPSEFIIQFLQLRFPPNMQFPLIVIY 596 (674)
Q Consensus 531 ~~~~~~v~s~g~pfr~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~p~~~~~~~l~~ 596 (674)
++.++++++.|.|||+++++|+++++++++.+++++++++.+.|+++.+|+++++| ..|+..+++
T Consensus 989 ~~~~~~~~~~g~pf~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~l~~ 1053 (1054)
T TIGR01657 989 YLITAIVNSKGPPFREPIYKNKPFVYLLITGLGLLLVLLLDPHPLLGKILQIVPLP-QEFRSKLLV 1053 (1054)
T ss_pred HHHheEEEcCCcchhhhHHHhHHHHHHHHHHHHHHHHhhhCCCHHHHhhheeeeCC-HHHHHHHhh
Confidence 99999999999999999999999999999888888877777889999999999999 688887764
No 3
>KOG0209|consensus
Probab=100.00 E-value=7.2e-83 Score=692.16 Aligned_cols=550 Identities=29% Similarity=0.461 Sum_probs=459.4
Q ss_pred CCCcCCceEEEEEEcCCCCcCccccccccccchHHHHHHHhhcccceecCCcccCCHHHHHHHHHcCcEEeCCCC---cc
Q psy6090 41 EDSRKTRHYASVVPLQGKKLGAPIKHIQNTNEHVKLKHGMATCHSLTLINGELSGDPLDLKMFESTGWTLEEPNL---KE 117 (674)
Q Consensus 41 ~~te~gld~~g~~~~~~~~f~~~~~~~~~~~~~~~~~~~~a~Chsl~~~~~~l~Gdpld~~m~~~t~~~l~~~~~---~~ 117 (674)
.+|+|.|-+-||-..++.. ......++.|. .-+.++|+||||...|++++|||||.+++++.||+++..+. .+
T Consensus 489 TLT~d~lvv~Gvag~~~~~--~~~~~~s~~p~--~t~~vlAscHsLv~le~~lVGDPlEKA~l~~v~W~~~k~~~v~p~~ 564 (1160)
T KOG0209|consen 489 TLTEDDLVVEGVAGLSADE--GALTPASKAPN--ETVLVLASCHSLVLLEDKLVGDPLEKATLEAVGWNLEKKNSVCPRE 564 (1160)
T ss_pred ccccccEEEEecccccCCc--ccccchhhCCc--hHHHHHHHHHHHHHhcCcccCChHHHHHHHhcCcccccCcccCCCc
Confidence 4899999999997654321 12334566664 56678999999999999999999999999999999876431 11
Q ss_pred ----------cCCCC---CccceEecC--CCCCc-------------cccccccchHHHHHHHHHhhcCcEEEEEeeecc
Q psy6090 118 ----------DCHYE---LPIPAIVRP--PSGDY-------------QSVLISVPENIVSVLSEYTEQGYRVIALASRTL 169 (674)
Q Consensus 118 ----------~~~~~---~~~~~v~~~--~~~~l-------------qsvi~~~p~~~~~~l~~~~~~G~Rvla~A~k~l 169 (674)
..+|. ++|+++.+. +++.. |....++|++|++.+..|+++|.||||+|||.|
T Consensus 565 ~~~~~lkI~~ryhFsSaLKRmsvva~~~~~g~s~k~~~aVKGAPEvi~~ml~dvP~dY~~iYk~ytR~GsRVLALg~K~l 644 (1160)
T KOG0209|consen 565 GNGKKLKIIQRYHFSSALKRMSVVASHQGPGSSEKYFVAVKGAPEVIQEMLRDVPKDYDEIYKRYTRQGSRVLALGYKPL 644 (1160)
T ss_pred CCCcccchhhhhhHHHHHHHHHhhhhcccCCCceEEEEEecCCHHHHHHHHHhCchhHHHHHHHHhhccceEEEEecccc
Confidence 12233 256665551 11111 122277999999999999999999999999999
Q ss_pred cccchHHHhhhchhhhcccceeeeeehhccCCCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCCCCCCCeEEEE
Q psy6090 170 SIDDYKHLNYMKREDIEKDLEFLGLIILENRLKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKECGIIDPGETVVDV 249 (674)
Q Consensus 170 ~~~~~~~~~~~~r~~iE~dL~flGli~~en~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~gi~~~~~~vi~~ 249 (674)
....-.+..+++||++|+||+|.|+++|.+|+|+|++++|++|+++++|++|+||||++||++||+++||+.....++..
T Consensus 645 ~~~~~~q~rd~~Re~vEsdLtFaGFlif~CPlK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak~v~iv~k~~~vl~~ 724 (1160)
T KOG0209|consen 645 GDMMVSQVRDLKREDVESDLTFAGFLIFSCPLKPDSKKTIKELNNSSHRVVMITGDNPLTACHVAKEVGIVEKPTLVLDL 724 (1160)
T ss_pred cccchhhhhhhhhhhhhhcceeeeeEEEeCCCCccHHHHHHHHhccCceEEEEeCCCccchheehheeeeeccCceeecc
Confidence 96666677789999999999999999999999999999999999999999999999999999999999999766555544
Q ss_pred eCCCCCCCCCCceEEEEcCcchhhhhhhhccCCchhhhhccCCCCeEEEEcchhHHHHHhhCchhHHHHHhhccEEEecC
Q psy6090 250 SAVPGGLKECPKVYFTVSGVSAIQTKAKKLNYSKTEEELGLSSGAYKFAVTGKSWELIRDQMPELIPRIIVKGAIFARMS 329 (674)
Q Consensus 250 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~itG~~~~~i~~~~~~~~~~i~~~~~VfaR~s 329 (674)
.... ......|.+.|........ ...... .....|.++++|+.++.+.++ +.+.+++.++.||||++
T Consensus 725 ~~~~----~~~~~~w~s~d~t~~lp~~----p~~~~~---~l~~~~dlcitG~~l~~l~~~--~~l~~l~~hv~VfARva 791 (1160)
T KOG0209|consen 725 PEEG----DGNQLEWVSVDGTIVLPLK----PGKKKT---LLAETHDLCITGSALDHLQAT--DQLRRLIPHVWVFARVA 791 (1160)
T ss_pred CccC----CCceeeEecCCCceeecCC----CCccch---hhhhhhhhhcchhHHHHHhhh--HHHHHhhhheeEEEeeC
Confidence 3322 2356889988875432110 000000 123568899999999999875 47888889999999999
Q ss_pred HHHHHHHHHHHHHcCCEEEEeCCCccchhhhhhCCcceeecC--------------------------------------
Q psy6090 330 SDQKQQLVLELQQLGYYVAMCGDGANDCGALRAAHAGISLSE-------------------------------------- 371 (674)
Q Consensus 330 P~qK~~iV~~lq~~g~~V~m~GDG~ND~~aLk~AdvGIams~-------------------------------------- 371 (674)
|.||..++..+++.||.++|||||+||+||||+||||||+-+
T Consensus 792 P~QKE~ii~tlK~~Gy~TLMCGDGTNDVGALK~AhVGVALL~~~~e~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~ 871 (1160)
T KOG0209|consen 792 PKQKEFIITTLKKLGYVTLMCGDGTNDVGALKQAHVGVALLNNPEESKKDKEKRRKKKLKLEPAKQTIAANRQNSPRPPV 871 (1160)
T ss_pred hhhHHHHHHHHHhcCeEEEEecCCCcchhhhhhcccceehhcCChhhhhHHhhhhhhccccCchhhHHHhhhccCCCCCC
Confidence 999999999999999999999999999999999999999954
Q ss_pred -----------------------------------CccccccCccccccchhHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Q psy6090 372 -----------------------------------AESSVASPFTSTVANISCVLRIIREGRAALVTSFGIFKFMVLYSL 416 (674)
Q Consensus 372 -----------------------------------aeasvAAdf~s~~~~i~~V~~~I~eGR~~l~ts~~~~k~~~~~~l 416 (674)
++||+|||||++..+++||.++||+|||+|+|+.+|||.+++.++
T Consensus 872 p~~~~~~~~~~~~~e~l~~i~kdlee~~~~p~vKLGDASiAAPFTsK~asv~~v~~IIrQGRctLVtTlQMfKILALN~L 951 (1160)
T KOG0209|consen 872 PPAERHNPHAEKTRERLKKILKDLEEDKGDPLVKLGDASIAAPFTSKLASVSSVTHIIRQGRCTLVTTLQMFKILALNCL 951 (1160)
T ss_pred CCccccChhHHHHHHHHHHHHHHHhhcccCccccccccccccccccccchHHHHHHHHHhcchhHHHHHHHHHHHHHHHH
Confidence 168899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHccCCCCCCCCcCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHH
Q psy6090 417 CEFFSTMILYTIDSNLTDFEFLYIDIALVVNFAFFFGRNHAFSGPLTSETPLNSLFSYVTLLSMFFQLILMVSMQIISFI 496 (674)
Q Consensus 417 ~~~~~~~~l~~~~~~l~~~q~L~idl~~~~~~~~~l~~~~p~~~~L~~~~P~~~l~s~~~~~si~~q~~i~~~~~~~~~~ 496 (674)
+++++..++|..+..++|.|.....+++ ..+.+++++.+|.+ +|+++||..++|+.+++.|+++|+.+|++..+...-
T Consensus 952 isAYslSvlyldGVKfgD~QaTisGlLl-a~cFlfISrskPLe-tLSkeRP~~nIFN~Y~i~svl~QFaVH~~tLvYi~~ 1029 (1160)
T KOG0209|consen 952 ISAYSLSVLYLDGVKFGDTQATISGLLL-AACFLFISRSKPLE-TLSKERPLPNIFNVYIILSVLLQFAVHIATLVYITG 1029 (1160)
T ss_pred HHHHHHHHhhhcCceecchhHhHHHHHH-HHHHhheecCCchh-hHhhcCCCCCcchHHHHHHHHHHHHHHHHHhhhhHH
Confidence 9999999999999999999999877654 44568899999999 999999999999999999999999998876554332
Q ss_pred HHhhcccccccccC---CCCccCcchhhHHHHHHHHHHHHHHHHhcCCCCcccccccchhHHHHHHHHHHHHHHhhcccc
Q psy6090 497 IVHKFAWFEPFVYT---NAISYSCYENYAVFSISMFQYIILAITFSQGKPYRTPIYKNKLFILSIIIMTWVCIYITLIPS 573 (674)
Q Consensus 497 ~~~~~~w~~~~~~~---~~~~~~~~~~t~~f~~~~~q~~~~~~v~s~g~pfr~~~~~N~~~~~~~~~~~~~~~~~~~~~~ 573 (674)
... . ..|.... +..+.++..||++|+++..|++..+.++++|.|||+++..|+.++.+++...++.+.+.....
T Consensus 1030 ~a~--~-~~p~~~~vdl~~~F~PsllNt~vyiisl~~QvsTFAVNY~G~PF~Esl~eNK~l~y~ll~~~~~~~~l~tg~~ 1106 (1160)
T KOG0209|consen 1030 EAY--K-LEPPEEKVDLEEKFSPSLLNTTVYIISLAQQVSTFAVNYQGRPFRESLRENKGLLYGLLGSAGVIIALATGSS 1106 (1160)
T ss_pred HHH--h-cCCcccccChhcccChhhhhhHHHHHHHHHHHHHhhhhccCcchhhhhhhccchHHHHHHHHHHHHHHHhccC
Confidence 221 1 1222111 446778999999999999999999999999999999999999999999998888888888888
Q ss_pred hhhhhcceecCCCCCcHHHHHHHHHHHHHHHHHHHHHHHH
Q psy6090 574 EFIIQFLQLRFPPNMQFPLIVIYLAICNFVLSLFIENFII 613 (674)
Q Consensus 574 ~~l~~~~~l~~~p~~~~~~~l~~~~~~~~~~~~~~e~~~~ 613 (674)
+.++..|+++++| ..|+..++++++..+++||++|+++.
T Consensus 1107 peLn~~~~lV~mp-~~fk~~ll~~l~lD~v~c~~~er~~~ 1145 (1160)
T KOG0209|consen 1107 PELNEKFELVDMP-QDFKIKLLAVLVLDFVLCYLVERVLK 1145 (1160)
T ss_pred hhHHhheeeeccc-HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999 99999999999999999999998875
No 4
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.8e-62 Score=577.77 Aligned_cols=497 Identities=23% Similarity=0.349 Sum_probs=374.8
Q ss_pred ccccCCCCCCccccCCC--CCcCCceEEEEEEcC-CCCcCccccccccccchHHHHHHHhhcccceecC--CcccCCHHH
Q psy6090 25 PAIVRPPSDSQAYENHE--DSRKTRHYASVVPLQ-GKKLGAPIKHIQNTNEHVKLKHGMATCHSLTLIN--GELSGDPLD 99 (674)
Q Consensus 25 ~~~~~~~~~~~~~~~~~--~te~gld~~g~~~~~-~~~f~~~~~~~~~~~~~~~~~~~~a~Chsl~~~~--~~l~Gdpld 99 (674)
|.++-+..-+-..-+++ +||+.|.+..+.+.+ .....+ ......+....++.++++||+..... +...|||+|
T Consensus 340 ~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~lc~~~~~~~~~~~~~gdptE 417 (917)
T COG0474 340 NAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGGKDIDD--KDLKDSPALLRFLLAAALCNSVTPEKNGWYQAGDPTE 417 (917)
T ss_pred chhhhccCccEEEecCCCCCccCeEEEEEEEeCCCcccccc--cccccchHHHHHHHHHHhcCcccccccCceecCCccH
Confidence 34444444333333443 999999999998885 222221 01111111124788899999998764 567999999
Q ss_pred HHHHHHcCcEEe--C-C------CCcccCCCCC---ccceEecCCCCC----cc---ccc--------------cccchH
Q psy6090 100 LKMFESTGWTLE--E-P------NLKEDCHYEL---PIPAIVRPPSGD----YQ---SVL--------------ISVPEN 146 (674)
Q Consensus 100 ~~m~~~t~~~l~--~-~------~~~~~~~~~~---~~~~v~~~~~~~----lq---svi--------------~~~p~~ 146 (674)
.+++++..|.-. . . ......+|++ +|+++++..++. .+ .+| +..++.
T Consensus 418 ~Al~~~a~~~~~~~~~~~~~~~~~~~~~~PFdS~rKrMsviv~~~~~~~~~~~KGApe~il~~~~~~~~~~~~~~~~~~~ 497 (917)
T COG0474 418 GALVEFAEKLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSIGELEPLTEEGLRT 497 (917)
T ss_pred HHHHHHHHhcCCcCCHHHHhhhcceeEEecCCCCceEEEEEEEcCCCcEEEEEcCChHHHHHHhcccCcccccCHHHHHH
Confidence 999988765321 1 1 1123466774 799999844332 11 111 355788
Q ss_pred HHHHHHHHhhcCcEEEEEeeecccccchHHHhhhchhhhcccceeeeeehhccCCCcchHHHHHHHHhcCCeEEEEcCCC
Q psy6090 147 IVSVLSEYTEQGYRVIALASRTLSIDDYKHLNYMKREDIEKDLEFLGLIILENRLKPQTEGVIKELKDARVKVVMITGDN 226 (674)
Q Consensus 147 ~~~~l~~~~~~G~Rvla~A~k~l~~~~~~~~~~~~r~~iE~dL~flGli~~en~lk~~t~~~I~~L~~agIrvvmiTGDn 226 (674)
+.+..++|+++||||||+|||.++..+.. ... +++|+||+|+|+++|+||||++++++|+.|++||||+||+||||
T Consensus 498 ~~~~~~~la~~glRvla~A~k~~~~~~~~---~~~-~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~MiTGD~ 573 (917)
T COG0474 498 LEEAVKELASEGLRVLAVAYKKLDRAEKD---DEV-DEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGDH 573 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCccccc---chh-hhhhccceeehhhhccCCCCccHHHHHHHHHHCCCcEEEECCCC
Confidence 99999999999999999999988743211 111 78999999999999999999999999999999999999999999
Q ss_pred HhhHHHHHHHcCCCCCCCeEEEEeCCCCCCCCCCceEEEEcCcchhhhhhhhccCCchhhhhccCCCCeEEEEcchhHHH
Q psy6090 227 IQTAISVAKECGIIDPGETVVDVSAVPGGLKECPKVYFTVSGVSAIQTKAKKLNYSKTEEELGLSSGAYKFAVTGKSWEL 306 (674)
Q Consensus 227 ~~TA~~vA~~~gi~~~~~~vi~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~itG~~~~~ 306 (674)
+.||++||++||+..+... .++++|+.++.
T Consensus 574 ~~TA~aIa~~~Gi~~~~~~--------------------------------------------------~~vi~G~el~~ 603 (917)
T COG0474 574 VETAIAIAKECGIEAEAES--------------------------------------------------ALVIDGAELDA 603 (917)
T ss_pred HHHHHHHHHHcCCCCCCCc--------------------------------------------------eeEeehHHhhh
Confidence 9999999999998543210 45889999887
Q ss_pred HHhhCchhHHHHHhhccEEEecCHHHHHHHHHHHHHcCCEEEEeCCCccchhhhhhCCcceeecCCcccc---ccCcccc
Q psy6090 307 IRDQMPELIPRIIVKGAIFARMSSDQKQQLVLELQQLGYYVAMCGDGANDCGALRAAHAGISLSEAESSV---ASPFTST 383 (674)
Q Consensus 307 i~~~~~~~~~~i~~~~~VfaR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~aLk~AdvGIams~aeasv---AAdf~s~ 383 (674)
+.++ ++.+.+.++.||||+||+||.++|+.+|+.|++|+|||||+||++|||+|||||||++.+.++ |||+++.
T Consensus 604 l~~~---el~~~~~~~~VfARvsP~qK~~IV~~lq~~g~vVamtGDGvNDapALk~ADVGIamg~~Gtdaak~Aadivl~ 680 (917)
T COG0474 604 LSDE---ELAELVEELSVFARVSPEQKARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIAMGGEGTDAAKEAADIVLL 680 (917)
T ss_pred cCHH---HHHHHhhhCcEEEEcCHHHHHHHHHHHHhCCCEEEEeCCCchhHHHHHhcCccEEecccHHHHHHhhcceEee
Confidence 7653 667778888899999999999999999999999999999999999999999999999866555 7999999
Q ss_pred ccchhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hc-CCCchhHHHHHHHHHHHHHHHHHccCCCCCC
Q psy6090 384 VANISCVLRIIREGRAALVTSFGIFKFMVLYSLCEFFSTMILYT--ID-SNLTDFEFLYIDIALVVNFAFFFGRNHAFSG 460 (674)
Q Consensus 384 ~~~i~~V~~~I~eGR~~l~ts~~~~k~~~~~~l~~~~~~~~l~~--~~-~~l~~~q~L~idl~~~~~~~~~l~~~~p~~~ 460 (674)
++++..+..+++|||+++.++.++++|++..++.+++..++.+. .+ .|++++|+||+|++++.+|+++++.++|..
T Consensus 681 dd~~~~i~~av~eGR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~~p~~~~qll~inll~d~~pa~~L~~~~~~~- 759 (917)
T COG0474 681 DDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTLLIYSLFNLFFLPLTPLQLLWINLLTDSLPALALGVEDPES- 759 (917)
T ss_pred cCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhhhhhheeecCCCcc-
Confidence 99999999999999999999999999999999987766655433 33 679999999999999999999999998777
Q ss_pred CCcCC---CCCCCccchHHHHHHHHH-HHHHHHHHHHHHHHHhhcccccccccCCCCccCcchhhHHH-HHHHHHHHHHH
Q psy6090 461 PLTSE---TPLNSLFSYVTLLSMFFQ-LILMVSMQIISFIIVHKFAWFEPFVYTNAISYSCYENYAVF-SISMFQYIILA 535 (674)
Q Consensus 461 ~L~~~---~P~~~l~s~~~~~si~~q-~~i~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~t~~f-~~~~~q~~~~~ 535 (674)
.++++ +|..++++.+.+.+++++ ++..+++.++.|.+.....+...... ........|+.| .++.+|.+..+
T Consensus 760 ~~m~~~~~~p~~~i~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~---~~~~~~~~t~~f~~~~~~~~~~~~ 836 (917)
T COG0474 760 DVMKRPPRGPEEGLFNRKIFWRFILIIGLLSAILFILTFLLYLLGFIANTLGL---DLFQALLQTTAFTVLVLIQLLLTL 836 (917)
T ss_pred cccccCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccch---hhHHHHHHHHHHHHHHHHHHHHHH
Confidence 45544 456789999999995555 44445555555554433222211100 001222344445 57778999999
Q ss_pred HHhcCCCCcccc-cccchhHHHHHHHHHHHHHHhhcccchhhh-hcceecCCC
Q psy6090 536 ITFSQGKPYRTP-IYKNKLFILSIIIMTWVCIYITLIPSEFII-QFLQLRFPP 586 (674)
Q Consensus 536 ~v~s~g~pfr~~-~~~N~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~l~~~p 586 (674)
.+++.+.|++.. +++|+.+++++++..+++++..+.+ +.. ..|+..++.
T Consensus 837 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~l~l~~~~~~--~~~~~~f~~~~~~ 887 (917)
T COG0474 837 AVRSRGRPFLSSLLFSNKYLWLALLVIIILQLLIIFLP--PLNLKIFQPTPLS 887 (917)
T ss_pred HHhccccchhhcccccCHHHHHHHHHHHHHHHHHHHhH--HhHhhhccCCCCc
Confidence 999998887665 5799999999999998888887753 344 566766665
No 5
>KOG0202|consensus
Probab=100.00 E-value=2.1e-59 Score=514.40 Aligned_cols=479 Identities=22% Similarity=0.302 Sum_probs=361.8
Q ss_pred HHHHHHHhhcccceecCCcc-----cCCHHHHHHHH---HcCcE-Ee--CC-C---------------CcccCCCC---C
Q psy6090 74 VKLKHGMATCHSLTLINGEL-----SGDPLDLKMFE---STGWT-LE--EP-N---------------LKEDCHYE---L 123 (674)
Q Consensus 74 ~~~~~~~a~Chsl~~~~~~l-----~Gdpld~~m~~---~t~~~-l~--~~-~---------------~~~~~~~~---~ 123 (674)
..+.++-+.|++.++..++. .|+|+|.++.. ..|.- .. .. + ...+.+|+ +
T Consensus 397 ~~l~~i~~lCNda~v~~~~~~~~~~~G~pTE~AL~vlaeKm~l~~~~~~~~s~~~~~~c~~~~~~~~~~~~elpFssdrK 476 (972)
T KOG0202|consen 397 QELAEICALCNDATVEYNDADCYEKVGEPTEGALIVLAEKMGLPGTRSTNLSNEEASACNRVYSRLFKKIAELPFSSDRK 476 (972)
T ss_pred HHHHHHHHhhhhhhhhcCchhhHHhcCCchHHHHHHHHHHcCCCcchhhcccccccccchhHHHHhhhheeEeecccccc
Confidence 56788889999999886666 99999987643 22220 00 00 0 00123455 3
Q ss_pred ccceEecCCCCC----------ccccc------------------cccchHHHHHHHHHhhcCcEEEEEeeecccc---c
Q psy6090 124 PIPAIVRPPSGD----------YQSVL------------------ISVPENIVSVLSEYTEQGYRVIALASRTLSI---D 172 (674)
Q Consensus 124 ~~~~v~~~~~~~----------lqsvi------------------~~~p~~~~~~l~~~~~~G~Rvla~A~k~l~~---~ 172 (674)
.|++++.+..+. ..+|+ +..++.+.+...+|+++|+||||+|++..+. +
T Consensus 477 ~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~~~~g~~gLRvLalA~~~~~~~~~~ 556 (972)
T KOG0202|consen 477 SMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANVYEMGSEGLRVLALASKDSPGQVPD 556 (972)
T ss_pred eEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHHHHHhhccceEEEEEccCCcccChh
Confidence 677777644432 11333 2235778889999999999999999997763 1
Q ss_pred chHHHhhhchhhhcccceeeeeehhccCCCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCCCCCCCeEEEEeCC
Q psy6090 173 DYKHLNYMKREDIEKDLEFLGLIILENRLKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKECGIIDPGETVVDVSAV 252 (674)
Q Consensus 173 ~~~~~~~~~r~~iE~dL~flGli~~en~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~gi~~~~~~vi~~~~~ 252 (674)
+-......+|...|+||+|+|++++-||+|++++++|+.|++|||||+|+||||..||.+|||++|+...++.+
T Consensus 557 ~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed~------ 630 (972)
T KOG0202|consen 557 DQDLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDEDV------ 630 (972)
T ss_pred hhhhcccccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCccc------
Confidence 11222345678999999999999999999999999999999999999999999999999999999997654321
Q ss_pred CCCCCCCCceEEEEcCcchhhhhhhhccCCchhhhhccCCCCeEEEEcchhHHHHHhhCchhHHHHHhhccEEEecCHHH
Q psy6090 253 PGGLKECPKVYFTVSGVSAIQTKAKKLNYSKTEEELGLSSGAYKFAVTGKSWELIRDQMPELIPRIIVKGAIFARMSSDQ 332 (674)
Q Consensus 253 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~itG~~~~~i~~~~~~~~~~i~~~~~VfaR~sP~q 332 (674)
...++||++|+.+.+ +..+....++.+|||++|.+
T Consensus 631 ------------------------------------------~~~~~TG~efD~ls~---~~~~~~~~~~~vFaR~~P~H 665 (972)
T KOG0202|consen 631 ------------------------------------------SSMALTGSEFDDLSD---EELDDAVRRVLVFARAEPQH 665 (972)
T ss_pred ------------------------------------------cccccchhhhhcCCH---HHHHHHhhcceEEEecCchh
Confidence 123788998887653 45666777899999999999
Q ss_pred HHHHHHHHHHcCCEEEEeCCCccchhhhhhCCcceeecCCcccc---ccCccccccchhHHHHHHHHhhHHHHHHHHHHH
Q psy6090 333 KQQLVLELQQLGYYVAMCGDGANDCGALRAAHAGISLSEAESSV---ASPFTSTVANISCVLRIIREGRAALVTSFGIFK 409 (674)
Q Consensus 333 K~~iV~~lq~~g~~V~m~GDG~ND~~aLk~AdvGIams~aeasv---AAdf~s~~~~i~~V~~~I~eGR~~l~ts~~~~k 409 (674)
|.+||+.||+.|..|+|.|||.||++|||.||+|||||..+++| |||+++.++||+.|..+++|||+++.|+.+...
T Consensus 666 K~kIVeaLq~~geivAMTGDGVNDApALK~AdIGIAMG~~GTdVaKeAsDMVL~DDnFstIvaAVEEGr~IynNik~Fir 745 (972)
T KOG0202|consen 666 KLKIVEALQSRGEVVAMTGDGVNDAPALKKADIGIAMGISGTDVAKEASDMVLADDNFSTIVAAVEEGRAIYNNIKNFIR 745 (972)
T ss_pred HHHHHHHHHhcCCEEEecCCCccchhhhhhcccceeecCCccHhhHhhhhcEEecCcHHHHHHHHHHhHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999888888 799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHH--HHHhhcCCCchhHHHHHHHHHHHHHHHHHccCCCCCCCCcCCCCCC---CccchHHHHHHHHHH
Q psy6090 410 FMVLYSLCEFFSTM--ILYTIDSNLTDFEFLYIDIALVVNFAFFFGRNHAFSGPLTSETPLN---SLFSYVTLLSMFFQL 484 (674)
Q Consensus 410 ~~~~~~l~~~~~~~--~l~~~~~~l~~~q~L~idl~~~~~~~~~l~~~~p~~~~L~~~~P~~---~l~s~~~~~si~~q~ 484 (674)
|++..++.+..++. ..+..+.++.++|+||+|++++.+||-++|.+||.+ .+|++||++ .+++...++.++..+
T Consensus 746 ~~lSsnVgev~~I~l~aa~~~p~pL~pvQiLWiNlvtDG~PA~aLG~ep~D~-DiM~kpPR~~~~~iit~~l~~r~l~~g 824 (972)
T KOG0202|consen 746 YLLSSNVGEVVLIFLTAAFGIPEPLIPVQILWINLVTDGPPATALGFEPVDP-DIMKKPPRDSKDGIITGWLIFRYLAIG 824 (972)
T ss_pred HHHhhhHHHHHHHHHHHHhCCCCcccchhhheeeeeccCCchhhcCCCCCCh-hHHhCCCCCCCCCeeeHHHHHHHHHhh
Confidence 99988888765543 467788999999999999999999999999999999 899999954 799999999999888
Q ss_pred HHHHHHHHHHHHHHhhcccccccc-cCCC----------C------ccCcchhhHHH-HHHHHHHHHHHHHhc-CCCCcc
Q psy6090 485 ILMVSMQIISFIIVHKFAWFEPFV-YTNA----------I------SYSCYENYAVF-SISMFQYIILAITFS-QGKPYR 545 (674)
Q Consensus 485 ~i~~~~~~~~~~~~~~~~w~~~~~-~~~~----------~------~~~~~~~t~~f-~~~~~q~~~~~~v~s-~g~pfr 545 (674)
++.++..+.+|.+-+... .+.. +.+. . +......|+.| .+..+..++....++ ..+.|+
T Consensus 825 ~~vg~~Tv~~f~~~~~~~--~~~vt~~~~~~~~~c~~~~~~~~c~~F~~~~~~tMa~tv~V~~emfNaL~~~se~~slf~ 902 (972)
T KOG0202|consen 825 IIVGVATVGVFVWWMYGA--DGKVTYRQLAHYNSCCRDFYGSRCAVFEDMCPLTMALTVLVFIEMFNALNCLSENKSLFT 902 (972)
T ss_pred eeeeeeEhHhhhHHHhcC--CCCcChhhhcchhhhcccccccchhhhcccccceEEEeehhHHHHHHHhhcccCCcceEE
Confidence 888777776665433321 1100 0000 0 00111123333 233344444333444 467799
Q ss_pred cccccchhHHHHHHHHHHHHHHhhcccchhhhhcceecCCCCCcHHHHHHHHHHHHHHHHHHHH
Q psy6090 546 TPIYKNKLFILSIIIMTWVCIYITLIPSEFIIQFLQLRFPPNMQFPLIVIYLAICNFVLSLFIE 609 (674)
Q Consensus 546 ~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~p~~~~~~~l~~~~~~~~~~~~~~e 609 (674)
.++++|++|++++.+.++.++.+++ .|+++..|++.++....|.. ++.+....+++..++|
T Consensus 903 ~~~~~N~~l~~ai~~S~~~~f~ilY--vp~l~~iFq~~~l~~~ew~~-vl~~s~~V~i~dEilK 963 (972)
T KOG0202|consen 903 MPPWSNRWLLWAIALSFVLHFLVLY--VPPLQRIFQTEPLSLAEWLL-VLAISSPVIIVDEILK 963 (972)
T ss_pred ecccccHHHHHHHHHHHHhhheEEE--echhhhhheecCCcHHHHHH-HHHHhhhhhhHHHHHH
Confidence 9999999999999888877766665 47899999999988444443 2333333344444333
No 6
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=100.00 E-value=3.4e-57 Score=542.51 Aligned_cols=552 Identities=18% Similarity=0.206 Sum_probs=383.3
Q ss_pred CcccccccccccCCCCCCccccCCC--CCcCCceEEEEEEcCC----CCcCcccc--ccccccchHHHHHHHhhccccee
Q psy6090 17 DCHYELPIPAIVRPPSDSQAYENHE--DSRKTRHYASVVPLQG----KKLGAPIK--HIQNTNEHVKLKHGMATCHSLTL 88 (674)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~--~te~gld~~g~~~~~~----~~f~~~~~--~~~~~~~~~~~~~~~a~Chsl~~ 88 (674)
.+.+--..+.++.+..-....-+++ +||..|.+..+..-.. +....... ...+.+..+.++.++++||+...
T Consensus 328 ~~ilvk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~alcn~~~~ 407 (997)
T TIGR01106 328 KNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGVSFDKSSATWLALSRIAGLCNRAVF 407 (997)
T ss_pred CCcEecCcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEecCCccCCCCccCCcccHHHHHHHHHHHHcCCCee
Confidence 3444444555556665555555554 7888888877643211 00000000 00001111368889999998875
Q ss_pred cCC---------cccCCHHHHHHHHHcCcEEeC-------CCCcccCCCCC---ccceEecCC---CCCc----c---cc
Q psy6090 89 ING---------ELSGDPLDLKMFESTGWTLEE-------PNLKEDCHYEL---PIPAIVRPP---SGDY----Q---SV 139 (674)
Q Consensus 89 ~~~---------~l~Gdpld~~m~~~t~~~l~~-------~~~~~~~~~~~---~~~~v~~~~---~~~l----q---sv 139 (674)
..+ ...|||+|.+++++..+.... .......+|++ +|.++++.. ++.+ + .+
T Consensus 408 ~~~~~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~~~~~~~~~~v~~~pF~s~rK~m~~v~~~~~~~~~~~~~~~KGApe~ 487 (997)
T TIGR01106 408 KAGQENVPILKRAVAGDASESALLKCIELCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHLLVMKGAPER 487 (997)
T ss_pred ccccCCCcccccccCcChHHHHHHHHHHHhCCCHHHHHhhCceeEEeccCCCCceEEEEEeccCCCCceEEEEEeCChHH
Confidence 422 468999999999876543211 11122345653 567766521 1110 1 11
Q ss_pred c-----------------cccchHHHHHHHHHhhcCcEEEEEeeecccccchHHHhhhchhh---hcccceeeeeehhcc
Q psy6090 140 L-----------------ISVPENIVSVLSEYTEQGYRVIALASRTLSIDDYKHLNYMKRED---IEKDLEFLGLIILEN 199 (674)
Q Consensus 140 i-----------------~~~p~~~~~~l~~~~~~G~Rvla~A~k~l~~~~~~~~~~~~r~~---iE~dL~flGli~~en 199 (674)
| +..++.+.+.++.|+++|+||||+|||.+++.++.+.....+++ .|+||+|+|+++++|
T Consensus 488 Il~~c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGli~i~D 567 (997)
T TIGR01106 488 ILERCSSILIHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQFDTDDVNFPTDNLCFVGLISMID 567 (997)
T ss_pred HHHHhhHHhcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEeecCcccccccccccchhhhccccCcEEEEEEeccC
Confidence 1 22356688889999999999999999999743322211222333 489999999999999
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCCCCCCCeEEEEeCCCCCCCCCCceEEEEcCcchhhhhhhhc
Q psy6090 200 RLKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKECGIIDPGETVVDVSAVPGGLKECPKVYFTVSGVSAIQTKAKKL 279 (674)
Q Consensus 200 ~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~gi~~~~~~vi~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 279 (674)
|+|++++++|++|+++||+++|+|||++.||.++|+++|+++++.... +.. . ..+....
T Consensus 568 plr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~--~~i--~----~~~~~~~------------- 626 (997)
T TIGR01106 568 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETV--EDI--A----ARLNIPV------------- 626 (997)
T ss_pred CChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccch--hhh--h----hhccccc-------------
Confidence 999999999999999999999999999999999999999987543210 000 0 0000000
Q ss_pred cCCchhhhhccCCCCeEEEEcchhHHHHHhhCchhHHHHHhhc--cEEEecCHHHHHHHHHHHHHcCCEEEEeCCCccch
Q psy6090 280 NYSKTEEELGLSSGAYKFAVTGKSWELIRDQMPELIPRIIVKG--AIFARMSSDQKQQLVLELQQLGYYVAMCGDGANDC 357 (674)
Q Consensus 280 ~~~~~~~~~~~~~~~~~l~itG~~~~~i~~~~~~~~~~i~~~~--~VfaR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~ 357 (674)
.+. ........+++|+.++.+.+ +.+.+++.+. .||||++|+||.++|+.+|+.|++|+|+|||+||+
T Consensus 627 ------~~~-~~~~~~~~vi~G~~l~~l~~---~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~ 696 (997)
T TIGR01106 627 ------SQV-NPRDAKACVVHGSDLKDMTS---EQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDS 696 (997)
T ss_pred ------ccc-ccccccceEEEhHHhhhCCH---HHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccH
Confidence 000 00112247899999987654 4566666655 49999999999999999999999999999999999
Q ss_pred hhhhhCCcceeecCCcccc---ccCccccccchhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHH--HHHhhcCCC
Q psy6090 358 GALRAAHAGISLSEAESSV---ASPFTSTVANISCVLRIIREGRAALVTSFGIFKFMVLYSLCEFFSTM--ILYTIDSNL 432 (674)
Q Consensus 358 ~aLk~AdvGIams~aeasv---AAdf~s~~~~i~~V~~~I~eGR~~l~ts~~~~k~~~~~~l~~~~~~~--~l~~~~~~l 432 (674)
+|||+|||||||+++++++ |||+++.++++++|+++|+|||.++.+....++|....++..++..+ .++..+.++
T Consensus 697 paLk~AdVGiamg~~G~~vak~aADivL~dd~f~~Iv~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl 776 (997)
T TIGR01106 697 PALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPL 776 (997)
T ss_pred HHHhhCCcceecCCcccHHHHHhhceEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCcchh
Confidence 9999999999999766555 69999999999999999999999999888888888777776655443 345567889
Q ss_pred chhHHHHHHHHHHHHHHHHHccCCCCCCCCcCCCCC----CCccchHHHHHH-HHHHHHHHHHHHHHHHHHhhccccccc
Q psy6090 433 TDFEFLYIDIALVVNFAFFFGRNHAFSGPLTSETPL----NSLFSYVTLLSM-FFQLILMVSMQIISFIIVHKFAWFEPF 507 (674)
Q Consensus 433 ~~~q~L~idl~~~~~~~~~l~~~~p~~~~L~~~~P~----~~l~s~~~~~si-~~q~~i~~~~~~~~~~~~~~~~w~~~~ 507 (674)
+++|+||+|++++.+++++++.++|.+ ++++++|. .+++++.++... +..+++++++++++|+++..+.|+.+.
T Consensus 777 ~~~qlL~inli~d~lp~~al~~e~~~~-~~m~~~P~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~ 855 (997)
T TIGR01106 777 GTITILCIDLGTDMVPAISLAYEKAES-DIMKRQPRNPKTDKLVNERLISMAYGQIGMIQALGGFFTYFVILAENGFLPL 855 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCc-ccccCCCcCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccc
Confidence 999999999999999999999999999 89998883 478888777664 455777777777777665443232110
Q ss_pred ---c-----c----C---CCC--c--------cCcchhhHHHH-HHHHHHHHHHHHhcCCC-CcccccccchhHHHHHHH
Q psy6090 508 ---V-----Y----T---NAI--S--------YSCYENYAVFS-ISMFQYIILAITFSQGK-PYRTPIYKNKLFILSIII 560 (674)
Q Consensus 508 ---~-----~----~---~~~--~--------~~~~~~t~~f~-~~~~q~~~~~~v~s~g~-pfr~~~~~N~~~~~~~~~ 560 (674)
. . . +.. . ......|+.|. +..+|.++...+++.+. +|+.+ ++|+.++.++++
T Consensus 856 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~R~~~~~~f~~~-~~n~~l~~~~~~ 934 (997)
T TIGR01106 856 HLVGLRVQWDDRWINDLEDSYGQEWTYEQRKYVEFTCHTAFFVSIVVVQWADLIICKTRRNSVFQQG-MKNKILIFGLFE 934 (997)
T ss_pred cccccccccccccccccccccccccchhcccchhhhhhHHHHHHHHHHHHHHHHHhccCcccccccC-CcCHHHHHHHHH
Confidence 0 0 0 000 0 00134567774 55688889888888654 47766 799999999988
Q ss_pred HHHHHHHhhcccchhhhhcceecCCCCCcHHHHHHHHHHHHHHH
Q psy6090 561 MTWVCIYITLIPSEFIIQFLQLRFPPNMQFPLIVIYLAICNFVL 604 (674)
Q Consensus 561 ~~~~~~~~~~~~~~~l~~~~~l~~~p~~~~~~~l~~~~~~~~~~ 604 (674)
.+++++++++. |+++.+|++.+++ +.++.++++++++.+++
T Consensus 935 ~~~l~~~~~~~--p~~~~~f~~~~l~-~~~w~~~~~~~~~~~~~ 975 (997)
T TIGR01106 935 ETALAAFLSYC--PGMGVALRMYPLK-PTWWFCAFPYSLLIFVY 975 (997)
T ss_pred HHHHHHHHHHh--hhhHHHhccccCC-HHHHHHHHHHHHHHHHH
Confidence 88887777765 6678999999998 55555555555554443
No 7
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=100.00 E-value=1e-56 Score=537.20 Aligned_cols=482 Identities=21% Similarity=0.286 Sum_probs=354.4
Q ss_pred HHHHHHHhhcccceecC----C--cccCCHHHHHHHHHcC-cEEe--------C-----------------------CCC
Q psy6090 74 VKLKHGMATCHSLTLIN----G--ELSGDPLDLKMFESTG-WTLE--------E-----------------------PNL 115 (674)
Q Consensus 74 ~~~~~~~a~Chsl~~~~----~--~l~Gdpld~~m~~~t~-~~l~--------~-----------------------~~~ 115 (674)
..++.++++||+....+ + +..|||+|.+++++.. +.++ + ...
T Consensus 448 ~~ll~~~~lcn~a~~~~~~~~~~~~~~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 527 (1053)
T TIGR01523 448 IKLLETAALANIATVFKDDATDCWKAHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEF 527 (1053)
T ss_pred HHHHHHHHhccCCeeeccCCCCceeeCcCccHHHHHHHHHHcCCCcccccchhhhhhhccccccccccccccccccccce
Confidence 35888999999988653 2 4689999999987641 2221 0 001
Q ss_pred cccCCCC---CccceEecCCCC-Cc----c---ccc-------------------cccchHHHHHHHHHhhcCcEEEEEe
Q psy6090 116 KEDCHYE---LPIPAIVRPPSG-DY----Q---SVL-------------------ISVPENIVSVLSEYTEQGYRVIALA 165 (674)
Q Consensus 116 ~~~~~~~---~~~~~v~~~~~~-~l----q---svi-------------------~~~p~~~~~~l~~~~~~G~Rvla~A 165 (674)
....+|+ ++|+++++..++ .+ + .+| +..++.+.+.+++|+++|+||||+|
T Consensus 528 ~~~~pFds~rK~msvv~~~~~~~~~~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A 607 (1053)
T TIGR01523 528 IAEFPFDSEIKRMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFA 607 (1053)
T ss_pred EEEeccCCCCCeEEEEEEeCCCCEEEEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEEEE
Confidence 1224566 478888874322 10 1 111 1124567888999999999999999
Q ss_pred eecccccchH--HH--hhhchhhhcccceeeeeehhccCCCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCCCC
Q psy6090 166 SRTLSIDDYK--HL--NYMKREDIEKDLEFLGLIILENRLKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKECGIID 241 (674)
Q Consensus 166 ~k~l~~~~~~--~~--~~~~r~~iE~dL~flGli~~en~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~gi~~ 241 (674)
||.++..++. .. ....|+++|+||+|+|+++++||+|++++++|++||+|||+++|+||||+.||.++|++|||.+
T Consensus 608 ~r~l~~~~~~~~~~~~~~~~~~~~e~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~ 687 (1053)
T TIGR01523 608 SKSFDKADNNDDQLKNETLNRATAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIP 687 (1053)
T ss_pred EEECCchhccchhhhccccchhhhccCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCC
Confidence 9999743211 01 1124678999999999999999999999999999999999999999999999999999999985
Q ss_pred CCCeEEEEeCCCCCCCCCCceEEEEcCcchhhhhhhhccCCchhhhhccCCCCeEEEEcchhHHHHHhhCchhHHHHHhh
Q psy6090 242 PGETVVDVSAVPGGLKECPKVYFTVSGVSAIQTKAKKLNYSKTEEELGLSSGAYKFAVTGKSWELIRDQMPELIPRIIVK 321 (674)
Q Consensus 242 ~~~~vi~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~itG~~~~~i~~~~~~~~~~i~~~ 321 (674)
++.. . .. . ......+++|+.++.+.+ +.+.++..+
T Consensus 688 ~~~~--~-~~--~-------------------------------------~~~~~~vitG~~l~~l~~---~~l~~~~~~ 722 (1053)
T TIGR01523 688 PNFI--H-DR--D-------------------------------------EIMDSMVMTGSQFDALSD---EEVDDLKAL 722 (1053)
T ss_pred cccc--c-cc--c-------------------------------------ccccceeeehHHhhhcCH---HHHHHHhhc
Confidence 4310 0 00 0 001135899999887643 456667778
Q ss_pred ccEEEecCHHHHHHHHHHHHHcCCEEEEeCCCccchhhhhhCCcceeecCCcccc---ccCccccccchhHHHHHHHHhh
Q psy6090 322 GAIFARMSSDQKQQLVLELQQLGYYVAMCGDGANDCGALRAAHAGISLSEAESSV---ASPFTSTVANISCVLRIIREGR 398 (674)
Q Consensus 322 ~~VfaR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~aLk~AdvGIams~aeasv---AAdf~s~~~~i~~V~~~I~eGR 398 (674)
+.||||++|+||.++|+.+|+.|++|+|+|||+||++|||+|||||||+..+.++ |||+++.++++++|+++|++||
T Consensus 723 ~~V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVGIAmg~~gt~vak~aADivl~dd~f~~I~~~i~~gR 802 (1053)
T TIGR01523 723 CLVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAMGINGSDVAKDASDIVLSDDNFASILNAIEEGR 802 (1053)
T ss_pred CeEEEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCccEecCCCccHHHHHhcCEEEecCCHHHHHHHHHHHH
Confidence 8999999999999999999999999999999999999999999999998655555 7999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH--HHh----h-cCCCchhHHHHHHHHHHHHHHHHHccCCCCCCCCcCCCCC---
Q psy6090 399 AALVTSFGIFKFMVLYSLCEFFSTMI--LYT----I-DSNLTDFEFLYIDIALVVNFAFFFGRNHAFSGPLTSETPL--- 468 (674)
Q Consensus 399 ~~l~ts~~~~k~~~~~~l~~~~~~~~--l~~----~-~~~l~~~q~L~idl~~~~~~~~~l~~~~p~~~~L~~~~P~--- 468 (674)
.++.+......|....++..++.+++ ++. . +.||++.|+||+|++++.+++++++.++|.+ .+|+++|.
T Consensus 803 ~~~~ni~k~i~y~l~~ni~~i~~~~~~~~~~~~~g~~~~Pl~~~qiL~inli~d~~palaL~~e~~~~-~~m~~~Pr~~~ 881 (1053)
T TIGR01523 803 RMFDNIMKFVLHLLAENVAEAILLIIGLAFRDENGKSVFPLSPVEILWCIMITSCFPAMGLGLEKAAP-DLMDRLPHDNE 881 (1053)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccCCCcCchHHHHHHHHHHHHHHHHHHhhccCCCCh-hHHhcCCCCCC
Confidence 99998888888877777665554433 221 1 3679999999999999999999999999999 89999884
Q ss_pred CCccchHHHHHHHHHHHHHHHHHHHHHHHHhhc-c-cccccccCCCC----ccCcchhhHHH-HHHHHHHHHHHHHhcCC
Q psy6090 469 NSLFSYVTLLSMFFQLILMVSMQIISFIIVHKF-A-WFEPFVYTNAI----SYSCYENYAVF-SISMFQYIILAITFSQG 541 (674)
Q Consensus 469 ~~l~s~~~~~si~~q~~i~~~~~~~~~~~~~~~-~-w~~~~~~~~~~----~~~~~~~t~~f-~~~~~q~~~~~~v~s~g 541 (674)
.+++++.++..++.++++.++..+++|++.... . +.......+.. .......|+.| .++++|.+....+++..
T Consensus 882 ~~l~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~t~~f~~l~~~~~~~~~~~r~~~ 961 (1053)
T TIGR01523 882 VGIFQKELIIDMFAYGFFLGGSCLASFTGILYGFGSGNLGHDCDAHYHAGCNDVFKARSAAFATMTFCALILAVEVKDFD 961 (1053)
T ss_pred ccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccccccccccccccccchhhhHHHHHHHHHHHHHHHHHHHhcCc
Confidence 579999999889989888888777777643210 0 00000000000 00112356667 46667888877777765
Q ss_pred CC-ccc---------------ccccchhHHHHHHHHHHHHHHhhcccchhhhh-cceecCCCCCcHHHHHHHHHHHHHHH
Q psy6090 542 KP-YRT---------------PIYKNKLFILSIIIMTWVCIYITLIPSEFIIQ-FLQLRFPPNMQFPLIVIYLAICNFVL 604 (674)
Q Consensus 542 ~p-fr~---------------~~~~N~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~l~~~p~~~~~~~l~~~~~~~~~~ 604 (674)
.+ |+. +.++|+++++++++.+++++++++. |+++. +|++.+++ +.|.+ +++++++.++.
T Consensus 962 ~~~~~~~~~~~~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~~~~~--p~~~~~~f~~~~l~-~~w~~-~~~~~~~~~~~ 1037 (1053)
T TIGR01523 962 NSFFNLHGIPDGDSNFKEFFHSIVENKFLAWAIAFAAVSAFPTIYI--PVINDDVFKHKPIG-AEWGL-AAAATIAFFFG 1037 (1053)
T ss_pred hhhhhcCccccccccccccccCCccCHHHHHHHHHHHHHHHHHHhh--hhhhhhhhccCCcc-hHHHH-HHHHHHHHHHH
Confidence 44 543 3679999999999888888777765 67885 99999998 55543 33333333333
Q ss_pred H
Q psy6090 605 S 605 (674)
Q Consensus 605 ~ 605 (674)
.
T Consensus 1038 ~ 1038 (1053)
T TIGR01523 1038 A 1038 (1053)
T ss_pred H
Confidence 3
No 8
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=100.00 E-value=1.6e-56 Score=535.27 Aligned_cols=519 Identities=19% Similarity=0.244 Sum_probs=374.7
Q ss_pred CCcccccccccccCCCCCCccccCCC--CCcCCceEEEEEEcCCCCcCcccccccccc--chHHHHHHHhhcccceec-C
Q psy6090 16 EDCHYELPIPAIVRPPSDSQAYENHE--DSRKTRHYASVVPLQGKKLGAPIKHIQNTN--EHVKLKHGMATCHSLTLI-N 90 (674)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~te~gld~~g~~~~~~~~f~~~~~~~~~~~--~~~~~~~~~a~Chsl~~~-~ 90 (674)
.++.+--..+.++.+..-....-+++ +||..+.+..+.+..+ .+.. .......+ ..+.+..++++||..... +
T Consensus 359 k~~ilvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~-~~~~-~~~~~~~~~~~~~~l~~~~~~~s~~~~~~~ 436 (941)
T TIGR01517 359 KDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQ-RFNV-RDVLRNVPKHVRNILVEGISLNSSSEEVVD 436 (941)
T ss_pred hCCCEEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEecc-eEec-CcccccCCHHHHHHHHHHHHhCCCCccccC
Confidence 33444444455555665555555554 8999999888765321 1110 00001111 112344455555544322 1
Q ss_pred ----CcccCCHHHHHHHHHcCcEEeC-------CCCcccCCCCC---ccceEecCCCCCc----c----ccc--------
Q psy6090 91 ----GELSGDPLDLKMFESTGWTLEE-------PNLKEDCHYEL---PIPAIVRPPSGDY----Q----SVL-------- 140 (674)
Q Consensus 91 ----~~l~Gdpld~~m~~~t~~~l~~-------~~~~~~~~~~~---~~~~v~~~~~~~l----q----svi-------- 140 (674)
.+..|||+|.+++++..+.-.+ .......+|++ +|.++++..++.+ + .++
T Consensus 437 ~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~msvv~~~~~~~~~~~~KGA~e~il~~c~~~~~ 516 (941)
T TIGR01517 437 RGGKRAFIGSKTECALLGFLLLLGRDYQEVRAEEKVVKIYPFNSERKFMSVVVKHSGGKVREFRKGASEIVLKPCRKRLD 516 (941)
T ss_pred CCCccccCCCccHHHHHHHHHHcCCCHHHHHhhchhccccccCCCCCeEEEEEEeCCCcEEEEEECChHHHHHhhhHHhh
Confidence 2578999999998876542111 11122345654 6777777433321 0 011
Q ss_pred ---c-----ccchHHHHHHHHHhhcCcEEEEEeeecccccchHHHhhhchhhhcccceeeeeehhccCCCcchHHHHHHH
Q psy6090 141 ---I-----SVPENIVSVLSEYTEQGYRVIALASRTLSIDDYKHLNYMKREDIEKDLEFLGLIILENRLKPQTEGVIKEL 212 (674)
Q Consensus 141 ---~-----~~p~~~~~~l~~~~~~G~Rvla~A~k~l~~~~~~~~~~~~r~~iE~dL~flGli~~en~lk~~t~~~I~~L 212 (674)
+ +.++++.+.++.|+++|+||+|+|||.++.+++. ..+..|+||+|+|+++++||+||+++++|++|
T Consensus 517 ~~g~~~~~~~~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~~~-----~~~~~e~~l~~lGli~~~Dplr~~~~~aI~~l 591 (941)
T TIGR01517 517 SNGEATPISDDKDRCADVIEPLASDALRTICLAYRDFAPEEFP-----RKDYPNGGLTLIGVVGIKDPLRPGVREAVQEC 591 (941)
T ss_pred cCCCcccCcHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccc-----cccccccCcEEEEEeeccCCCchhHHHHHHHH
Confidence 0 1235688899999999999999999998743321 12345899999999999999999999999999
Q ss_pred HhcCCeEEEEcCCCHhhHHHHHHHcCCCCCCCeEEEEeCCCCCCCCCCceEEEEcCcchhhhhhhhccCCchhhhhccCC
Q psy6090 213 KDARVKVVMITGDNIQTAISVAKECGIIDPGETVVDVSAVPGGLKECPKVYFTVSGVSAIQTKAKKLNYSKTEEELGLSS 292 (674)
Q Consensus 213 ~~agIrvvmiTGDn~~TA~~vA~~~gi~~~~~~vi~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (674)
|++||+++|+||||+.||.++|++|||.+++..
T Consensus 592 ~~aGI~v~miTGD~~~tA~~iA~~~GI~~~~~~----------------------------------------------- 624 (941)
T TIGR01517 592 QRAGITVRMVTGDNIDTAKAIARNCGILTFGGL----------------------------------------------- 624 (941)
T ss_pred HHCCCEEEEECCCChHHHHHHHHHcCCCCCCce-----------------------------------------------
Confidence 999999999999999999999999999754322
Q ss_pred CCeEEEEcchhHHHHHhhCchhHHHHHhhccEEEecCHHHHHHHHHHHHHcCCEEEEeCCCccchhhhhhCCcceeecCC
Q psy6090 293 GAYKFAVTGKSWELIRDQMPELIPRIIVKGAIFARMSSDQKQQLVLELQQLGYYVAMCGDGANDCGALRAAHAGISLSEA 372 (674)
Q Consensus 293 ~~~~l~itG~~~~~i~~~~~~~~~~i~~~~~VfaR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~aLk~AdvGIams~a 372 (674)
+++|+.++.+. .+.+.+++.+..||||++|+||.++|+.+|+.|++|+|+|||.||++|||+|||||||+.+
T Consensus 625 -----vi~G~~~~~l~---~~el~~~i~~~~Vfar~sPe~K~~iV~~lq~~g~vVam~GDGvNDapALk~AdVGIAmg~~ 696 (941)
T TIGR01517 625 -----AMEGKEFRRLV---YEEMDPILPKLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGTNDAPALKLADVGFSMGIS 696 (941)
T ss_pred -----EeeHHHhhhCC---HHHHHHHhccCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCCchHHHHHhCCcceecCCC
Confidence 46676665443 2556777788899999999999999999999999999999999999999999999999855
Q ss_pred cccc---ccCccccccchhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHH--HHHhhcCCCchhHHHHHHHHHHHH
Q psy6090 373 ESSV---ASPFTSTVANISCVLRIIREGRAALVTSFGIFKFMVLYSLCEFFSTM--ILYTIDSNLTDFEFLYIDIALVVN 447 (674)
Q Consensus 373 easv---AAdf~s~~~~i~~V~~~I~eGR~~l~ts~~~~k~~~~~~l~~~~~~~--~l~~~~~~l~~~q~L~idl~~~~~ 447 (674)
++++ |||+++.++++++|++++++||+++.+..+.+.|...+++..++..+ .++..+.+++++|+||+|++++.+
T Consensus 697 gtdvAk~aADivL~dd~f~~I~~~i~~gR~~~~ni~k~i~~~l~~n~~~i~~~~~~~~~~~~~pl~~~qil~inl~~d~~ 776 (941)
T TIGR01517 697 GTEVAKEASDIILLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVNVVAVILTFVGSCISSTSPLTAVQLLWVNLIMDTL 776 (941)
T ss_pred ccHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHh
Confidence 5554 69999999999999999999999999988888888888876554433 345567899999999999999999
Q ss_pred HHHHHccCCCCCCCCcCCCCC---CCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccCC-CCccCcchhhHH
Q psy6090 448 FAFFFGRNHAFSGPLTSETPL---NSLFSYVTLLSMFFQLILMVSMQIISFIIVHKFAWFEPFVYTN-AISYSCYENYAV 523 (674)
Q Consensus 448 ~~~~l~~~~p~~~~L~~~~P~---~~l~s~~~~~si~~q~~i~~~~~~~~~~~~~~~~w~~~~~~~~-~~~~~~~~~t~~ 523 (674)
++++++.++|.+ .+++++|. .+++++.++.++++++++++++.+..+++. +.|+....... .........|++
T Consensus 777 ~al~l~~e~~~~-~lm~~~P~~~~~~li~~~~~~~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~t~~ 853 (941)
T TIGR01517 777 AALALATEPPTE-ALLDRKPIGRNAPLISRSMWKNILGQAGYQLVVTFILLFAG--GSIFDVSGPDEITSHQQGELNTIV 853 (941)
T ss_pred hHHHHccCCccH-HHHhCCCCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHH--HhhhcccCcccccccccchhhHHH
Confidence 999999999999 89988885 489999999999999999888777766543 34553221100 011134567888
Q ss_pred H-HHHHHHHHHHHHHhcCCC-CcccccccchhHHHHHHHHHHHHHHhhcccchhhhhcceecCCCCCcHHHHHHHHHHHH
Q psy6090 524 F-SISMFQYIILAITFSQGK-PYRTPIYKNKLFILSIIIMTWVCIYITLIPSEFIIQFLQLRFPPNMQFPLIVIYLAICN 601 (674)
Q Consensus 524 f-~~~~~q~~~~~~v~s~g~-pfr~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~p~~~~~~~l~~~~~~~ 601 (674)
| .++++|.++...+++.+. ++.+++++|++++.++++.++++++++ ++++..|++.+++...|.+ .++++++.
T Consensus 854 f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~l~~~~~----~~~~~~f~~~~l~~~~w~~-~~~~~~~~ 928 (941)
T TIGR01517 854 FNTFVLLQLFNEINARKLYERNVFEGLFKNRIFVTIMGFTFGFQVIIV----EFGGSFFSTVSLSIEQWIG-CVLLGMLS 928 (941)
T ss_pred HHHHHHHHHHHHHHHccCCcccccccccccHHHHHHHHHHHHHHHHHH----HHHHHHhcccCCCHHHHHH-HHHHHHHH
Confidence 8 466788888888887653 544588999999988888777765443 4678899999988333333 33344443
Q ss_pred HHH
Q psy6090 602 FVL 604 (674)
Q Consensus 602 ~~~ 604 (674)
+++
T Consensus 929 ~~~ 931 (941)
T TIGR01517 929 LIF 931 (941)
T ss_pred HHH
Confidence 333
No 9
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=100.00 E-value=2.8e-55 Score=522.62 Aligned_cols=534 Identities=19% Similarity=0.258 Sum_probs=384.5
Q ss_pred CcccccccccccCCCCCCccccCCC--CCcCCceEEEEEEcCC------------CCcCccccccc--------cccchH
Q psy6090 17 DCHYELPIPAIVRPPSDSQAYENHE--DSRKTRHYASVVPLQG------------KKLGAPIKHIQ--------NTNEHV 74 (674)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~--~te~gld~~g~~~~~~------------~~f~~~~~~~~--------~~~~~~ 74 (674)
++.+--..+.++.+..-....-+++ +|+..+.+.++.+..+ ..|++.....+ ..+...
T Consensus 273 ~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (917)
T TIGR01116 273 KNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSSLNEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLE 352 (917)
T ss_pred CCcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEEecCCcccccceEEecCCccCCCccccccCCcccccchHHHH
Confidence 3444444556666666666666654 8999999988876532 12221100000 001114
Q ss_pred HHHHHHhhcccceecC----C--cccCCHHHHHHHHHc---CcEEeCC--------------------CCcccCCCC---
Q psy6090 75 KLKHGMATCHSLTLIN----G--ELSGDPLDLKMFEST---GWTLEEP--------------------NLKEDCHYE--- 122 (674)
Q Consensus 75 ~~~~~~a~Chsl~~~~----~--~l~Gdpld~~m~~~t---~~~l~~~--------------------~~~~~~~~~--- 122 (674)
.++.++++||+..... + +..|||+|.+++++. |+...+. ......+|+
T Consensus 353 ~l~~~~~lc~~~~~~~~~~~~~~~~~gdp~E~ALl~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~r 432 (917)
T TIGR01116 353 ELATIAALCNDSSLDFNERKGVYEKVGEATEAALKVLVEKMGLPATKNGVSSKRRPALGCNSVWNDKFKKLATLEFSRDR 432 (917)
T ss_pred HHHHHHHhcCCCeeeccccCCceeeccChhHHHHHHHHHHcCCCchhcccccccccccchhHHHHhhcceeeecccChhh
Confidence 5788999999987642 1 257999999998653 4332211 011224565
Q ss_pred CccceEecCCCCC-----------cc--c-cc----------cccchHHHHHHHHHhh-cCcEEEEEeeecccccchH--
Q psy6090 123 LPIPAIVRPPSGD-----------YQ--S-VL----------ISVPENIVSVLSEYTE-QGYRVIALASRTLSIDDYK-- 175 (674)
Q Consensus 123 ~~~~~v~~~~~~~-----------lq--s-vi----------~~~p~~~~~~l~~~~~-~G~Rvla~A~k~l~~~~~~-- 175 (674)
++|+++++..++. +. + .. +...+++.+.++.|++ +|+||||+|||.+++++..
T Consensus 433 K~msviv~~~~~~~~~~KGApe~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~~~ 512 (917)
T TIGR01116 433 KSMSVLCKPSTGNKLFVKGAPEGVLERCTHILNGDGRAVPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPREEDL 512 (917)
T ss_pred CeEEEEEeeCCcEEEEEcCChHHHHHhccceecCCCCeeeCCHHHHHHHHHHHHHHHhhcCCeEEEEEEEECCccccccc
Confidence 4788888743221 11 1 00 1123457788999999 9999999999998732110
Q ss_pred HHhhhchhhhcccceeeeeehhccCCCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCCCCCCCeEEEEeCCCCC
Q psy6090 176 HLNYMKREDIEKDLEFLGLIILENRLKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKECGIIDPGETVVDVSAVPGG 255 (674)
Q Consensus 176 ~~~~~~r~~iE~dL~flGli~~en~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~gi~~~~~~vi~~~~~~~~ 255 (674)
......++++|+||+|+|+++++||+|++++++|++||++||+++|+|||+..||.++|+++|+..++..+.
T Consensus 513 ~~~~~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v~-------- 584 (917)
T TIGR01116 513 LSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVT-------- 584 (917)
T ss_pred cccchhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCcccc--------
Confidence 011224467899999999999999999999999999999999999999999999999999999976443211
Q ss_pred CCCCCceEEEEcCcchhhhhhhhccCCchhhhhccCCCCeEEEEcchhHHHHHhhCchhHHHHHhhccEEEecCHHHHHH
Q psy6090 256 LKECPKVYFTVSGVSAIQTKAKKLNYSKTEEELGLSSGAYKFAVTGKSWELIRDQMPELIPRIIVKGAIFARMSSDQKQQ 335 (674)
Q Consensus 256 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~itG~~~~~i~~~~~~~~~~i~~~~~VfaR~sP~qK~~ 335 (674)
...++|+.++.+.+ +...+...+..||||++|+||.+
T Consensus 585 ----------------------------------------~~~~~g~~l~~~~~---~~~~~~~~~~~v~ar~~P~~K~~ 621 (917)
T TIGR01116 585 ----------------------------------------FKSFTGREFDEMGP---AKQRAACRSAVLFSRVEPSHKSE 621 (917)
T ss_pred ----------------------------------------ceeeeHHHHhhCCH---HHHHHhhhcCeEEEecCHHHHHH
Confidence 12456666554432 34455667789999999999999
Q ss_pred HHHHHHHcCCEEEEeCCCccchhhhhhCCcceeecCCcccc---ccCccccccchhHHHHHHHHhhHHHHHHHHHHHHHH
Q psy6090 336 LVLELQQLGYYVAMCGDGANDCGALRAAHAGISLSEAESSV---ASPFTSTVANISCVLRIIREGRAALVTSFGIFKFMV 412 (674)
Q Consensus 336 iV~~lq~~g~~V~m~GDG~ND~~aLk~AdvGIams~aeasv---AAdf~s~~~~i~~V~~~I~eGR~~l~ts~~~~k~~~ 412 (674)
+|+.+|+.|+.|+|+|||+||++|||+|||||||+++ .++ +||+++.++++++|.++++|||+++.+..+.++|.+
T Consensus 622 iV~~lq~~g~~va~iGDG~ND~~alk~AdVGia~g~g-~~~ak~aAD~vl~dd~f~~i~~~i~~GR~~~~ni~k~i~~~l 700 (917)
T TIGR01116 622 LVELLQEQGEIVAMTGDGVNDAPALKKADIGIAMGSG-TEVAKEASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRYMI 700 (917)
T ss_pred HHHHHHhcCCeEEEecCCcchHHHHHhCCeeEECCCC-cHHHHHhcCeEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999855 333 699999999999999999999999999988888888
Q ss_pred HHHHHHHHHHHH--HHhhcCCCchhHHHHHHHHHHHHHHHHHccCCCCCCCCcCCCC---CCCccchHHHHHHHHHHHHH
Q psy6090 413 LYSLCEFFSTMI--LYTIDSNLTDFEFLYIDIALVVNFAFFFGRNHAFSGPLTSETP---LNSLFSYVTLLSMFFQLILM 487 (674)
Q Consensus 413 ~~~l~~~~~~~~--l~~~~~~l~~~q~L~idl~~~~~~~~~l~~~~p~~~~L~~~~P---~~~l~s~~~~~si~~q~~i~ 487 (674)
..++..++..++ ++..+.++++.|++|+|++++.+++++++.++|.+ ++++++| .++++++.++.+++++++++
T Consensus 701 ~~ni~~~~~~~~~~~~~~~~pl~~~qll~inli~d~lp~~~l~~~~~~~-~~m~~pP~~~~~~l~~~~~~~~~~~~g~~~ 779 (917)
T TIGR01116 701 SSNIGEVVCIFLTAALGIPEGLIPVQLLWVNLVTDGLPATALGFNPPDK-DIMWKPPRRPDEPLITGWLFFRYLVVGVYV 779 (917)
T ss_pred hccHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHhcCCcch-hHhcCCCCCCCCCcccHHHHHHHHHHHHHH
Confidence 777766554433 44566899999999999999999999999999999 8988887 45899999999999999999
Q ss_pred HHHHHHHHHHHhhc-ccccc-------cccCCCC-----ccCcchhhHHH-HHHHHHHHHHHHHhcCCCC-cccccccch
Q psy6090 488 VSMQIISFIIVHKF-AWFEP-------FVYTNAI-----SYSCYENYAVF-SISMFQYIILAITFSQGKP-YRTPIYKNK 552 (674)
Q Consensus 488 ~~~~~~~~~~~~~~-~w~~~-------~~~~~~~-----~~~~~~~t~~f-~~~~~q~~~~~~v~s~g~p-fr~~~~~N~ 552 (674)
++..+++|++.... ++... ..+.+.. .......|+.| .++.+|.++.+.+++.+.+ |+.++++|+
T Consensus 780 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~~n~ 859 (917)
T TIGR01116 780 GLATVGGFVWWYLLTHFTGCDEDSFTTCPDFEDPDCYVFEGKQPARTISLSVLVVIEMFNALNALSEDQSLLRMPPWVNK 859 (917)
T ss_pred HHHHHHHHHHHHhhcCcccccccccccccccccccccccccccchHHHHHHHHHHHHHHHHHHHcCCcccccccCCccCH
Confidence 88877766554321 22110 0000000 01223457777 4667899998888886544 666778999
Q ss_pred hHHHHHHHHHHHHHHhhcccchhhhhcceecCCCCCcHHHHHHHHHHHHHHHHH
Q psy6090 553 LFILSIIIMTWVCIYITLIPSEFIIQFLQLRFPPNMQFPLIVIYLAICNFVLSL 606 (674)
Q Consensus 553 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~p~~~~~~~l~~~~~~~~~~~~ 606 (674)
++++++++.+++++++++. |+++..|++.+++ +..|.++++++++.++...
T Consensus 860 ~~~~~~~~~~~l~~~~~~v--~~~~~~f~~~~l~-~~~w~~~~~~~~~~~~~~e 910 (917)
T TIGR01116 860 WLIGAICLSMALHFLILYV--PFLSRIFGVTPLS-LTDWLMVLKLSLPVILVDE 910 (917)
T ss_pred HHHHHHHHHHHHHHHHHHh--HHHHHHhccCCCC-HHHHHHHHHHHHHHHHHHH
Confidence 9999999888888777764 6789999999988 4344444444444444433
No 10
>KOG0204|consensus
Probab=100.00 E-value=6.4e-57 Score=494.05 Aligned_cols=467 Identities=22% Similarity=0.304 Sum_probs=354.0
Q ss_pred HHHHHHHh--hcccceecC--C---cccCCHHHHHHHHHc---CcEEeC----CCCcccCCCC---CccceEec-CCCCC
Q psy6090 74 VKLKHGMA--TCHSLTLIN--G---ELSGDPLDLKMFEST---GWTLEE----PNLKEDCHYE---LPIPAIVR-PPSGD 135 (674)
Q Consensus 74 ~~~~~~~a--~Chsl~~~~--~---~l~Gdpld~~m~~~t---~~~l~~----~~~~~~~~~~---~~~~~v~~-~~~~~ 135 (674)
+.++++++ +|-++..-+ | +.+|.|+|-+++++. |-.+++ ++..+...|+ +.|.++++ +.++.
T Consensus 479 ~ll~~gI~~Nt~g~v~~~~~~g~~~~~~GspTE~AlL~f~~~LG~~~~~~R~e~~v~kv~~FNS~kK~~gvvi~~~~~~~ 558 (1034)
T KOG0204|consen 479 DLLLQGIAQNTTGSVVKPEKGGEQPEQLGSPTECALLGFGLKLGMDFQDVRPEEKVVKVYPFNSVKKRMGVVIKLPDGGH 558 (1034)
T ss_pred HHHHHHHhhcCCCeEEecCCCCcCccccCCHHHHHHHHHHHHhCcchHhhcchhheeEEeccCcccceeeEEEEcCCCCe
Confidence 45667776 333333321 2 489999999998754 444443 2223345565 36888888 44432
Q ss_pred -----------cc---ccc----------cccchHHHHHHHHHhhcCcEEEEEeeecccccchHHHhhhc-hhhhcccce
Q psy6090 136 -----------YQ---SVL----------ISVPENIVSVLSEYTEQGYRVIALASRTLSIDDYKHLNYMK-REDIEKDLE 190 (674)
Q Consensus 136 -----------lq---svi----------~~~p~~~~~~l~~~~~~G~Rvla~A~k~l~~~~~~~~~~~~-r~~iE~dL~ 190 (674)
|+ .++ +.-...+++.++.||++|+|+||+|||++... ..+..+.+ .+..+.+|+
T Consensus 559 y~~~KGAsEiVL~~C~~~~~~~g~~~~~~e~~~~~~~~~Ie~mA~~~LRti~lAy~df~~~-~~~~~~~~~~~~~~~~lt 637 (1034)
T KOG0204|consen 559 YVHWKGASEIVLKSCEYYIDSNGELVPFNEDDRKSFKDVIEPMASEGLRTICLAYRDFVAG-PDEEPSWDNEELPEGGLT 637 (1034)
T ss_pred EEEEcChHHHHHHhhhheECCCCCEeeCCHHHHHHHHHHHHHHHHhhhheeeEEeeccccC-CCCCCCccccccCCCCeE
Confidence 11 111 22345799999999999999999999996532 01111222 256789999
Q ss_pred eeeeehhccCCCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCCCCCCCeEEEEeCCCCCCCCCCceEEEEcCcc
Q psy6090 191 FLGLIILENRLKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKECGIIDPGETVVDVSAVPGGLKECPKVYFTVSGVS 270 (674)
Q Consensus 191 flGli~~en~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~gi~~~~~~vi~~~~~~~~~~~~~~i~~~~~~~~ 270 (674)
++|+++++||.||+++++|+.|++|||.|.|+||||..||.+||++|||+.++..
T Consensus 638 ~laivGIkDPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~d------------------------- 692 (1034)
T KOG0204|consen 638 LLAIVGIKDPVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGGD------------------------- 692 (1034)
T ss_pred EEEEeeccCCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCCc-------------------------
Confidence 9999999999999999999999999999999999999999999999999876532
Q ss_pred hhhhhhhhccCCchhhhhccCCCCeEEEEcchhHHHHHhhCchhHHHHHhhccEEEecCHHHHHHHHHHHHHcCCEEEEe
Q psy6090 271 AIQTKAKKLNYSKTEEELGLSSGAYKFAVTGKSWELIRDQMPELIPRIIVKGAIFARMSSDQKQQLVLELQQLGYYVAMC 350 (674)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~itG~~~~~i~~~~~~~~~~i~~~~~VfaR~sP~qK~~iV~~lq~~g~~V~m~ 350 (674)
.++++|++|..+. +++.+++..+..|+||.||.+|..+|+.+++.|++|+..
T Consensus 693 -------------------------~~~lEG~eFr~~s---~ee~~~i~pkl~VlARSSP~DK~lLVk~L~~~g~VVAVT 744 (1034)
T KOG0204|consen 693 -------------------------FLALEGKEFRELS---QEERDKIWPKLRVLARSSPNDKHLLVKGLIKQGEVVAVT 744 (1034)
T ss_pred -------------------------cceecchhhhhcC---HHHHHhhhhhheeeecCCCchHHHHHHHHHhcCcEEEEe
Confidence 2478888888554 467888889999999999999999999999999999999
Q ss_pred CCCccchhhhhhCCcceeecCCcccc---ccCccccccchhHHHHHHHHhhHHHHHHHHHHHHHHHHH----HHHHHHHH
Q psy6090 351 GDGANDCGALRAAHAGISLSEAESSV---ASPFTSTVANISCVLRIIREGRAALVTSFGIFKFMVLYS----LCEFFSTM 423 (674)
Q Consensus 351 GDG~ND~~aLk~AdvGIams~aeasv---AAdf~s~~~~i~~V~~~I~eGR~~l~ts~~~~k~~~~~~----l~~~~~~~ 423 (674)
|||.||.+|||.||||.||+-++++| |||+++.++||++|++++++||+.+.+.....+|-...+ ++.|++.
T Consensus 745 GDGTNDaPALkeADVGlAMGIaGTeVAKEaSDIIi~DDNFssIVk~v~WGR~VY~nIqKFiQFQLTVNVvAliv~fv~A- 823 (1034)
T KOG0204|consen 745 GDGTNDAPALKEADVGLAMGIAGTEVAKEASDIIILDDNFSSIVKAVKWGRNVYDNIQKFLQFQLTVNVVALIVNFVSA- 823 (1034)
T ss_pred cCCCCCchhhhhcccchhccccchhhhhhhCCeEEEcCchHHHHHHHHhhhHHHHHHHHhheeEEEEEEEeehhhhhhh-
Confidence 99999999999999999999999999 599999999999999999999999985544444422222 2222222
Q ss_pred HHHhhcCCCchhHHHHHHHHHHHHHHHHHccCCCCCCCCcCCCC---CCCccchHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy6090 424 ILYTIDSNLTDFEFLYIDIALVVNFAFFFGRNHAFSGPLTSETP---LNSLFSYVTLLSMFFQLILMVSMQIISFIIVHK 500 (674)
Q Consensus 424 ~l~~~~~~l~~~q~L~idl~~~~~~~~~l~~~~p~~~~L~~~~P---~~~l~s~~~~~si~~q~~i~~~~~~~~~~~~~~ 500 (674)
.....+||++.|+||+|++++++.|++++.+||.+ .|++++| .++|++..++..+++|.+++++..++..|.-..
T Consensus 824 -~~~~dsPLtAVQlLWVNLIMDTLgALALATepPt~-~Lm~RkP~GR~~~LIt~tMwknil~qa~YQl~vl~iL~F~G~~ 901 (1034)
T KOG0204|consen 824 -CATGDSPLTAVQLLWVNLIMDTLGALALATEPPTD-ELMKRKPVGRTKPLITRTMWKNILGQAVYQLIVLFILNFAGKS 901 (1034)
T ss_pred -hhcCCccHHHHHHHHHHHHHHHHHHHHhccCCCCh-HHhcCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcchh
Confidence 22356999999999999999999999999999999 8999999 568999999999999999988776665543321
Q ss_pred cccccccccCCCCccCcchhhHHH-HHHHHHHHHHHHHhcCC-CCcccccccchhHHHHHHHHHHHHHHhhcccchhhhh
Q psy6090 501 FAWFEPFVYTNAISYSCYENYAVF-SISMFQYIILAITFSQG-KPYRTPIYKNKLFILSIIIMTWVCIYITLIPSEFIIQ 578 (674)
Q Consensus 501 ~~w~~~~~~~~~~~~~~~~~t~~f-~~~~~q~~~~~~v~s~g-~pfr~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~l~~ 578 (674)
-|.... ....-+...||.+| .++.+|.++-+.++... ....+.+++|+.|+..+...+++++.++ .+...
T Consensus 902 --if~~~~--~~~~~~~~~nTiIFNtFV~~qvFNEinaRki~~~NvFkgi~~N~~F~~ii~~T~v~QviIv----eF~g~ 973 (1034)
T KOG0204|consen 902 --IFGLNG--PLHSPPSVHNTIIFNTFVFCQVFNEINARKIDERNVFKGIFRNRLFCVIITITVVSQVIIV----EFGGA 973 (1034)
T ss_pred --hhccCC--CCCCchhhheeeehhHHHHHHHHHHHhhcchhHHhHHHHHhcCceEEEEeeeeeehhhhhh----hhcCc
Confidence 111110 11223456789999 67888999888777643 3456788999999888888888777765 45678
Q ss_pred cceecCCCCCcHHHHHHHHHHHHHHHHH
Q psy6090 579 FLQLRFPPNMQFPLIVIYLAICNFVLSL 606 (674)
Q Consensus 579 ~~~l~~~p~~~~~~~l~~~~~~~~~~~~ 606 (674)
+|...++....|.++++ ++++.++...
T Consensus 974 ~~st~~L~~~qWl~ci~-~g~~sl~~g~ 1000 (1034)
T KOG0204|consen 974 FFSTTPLSLTQWLWCIF-IGVLSLPWGQ 1000 (1034)
T ss_pred ceeeecccHHHHHHHHH-HHHHHHHHHH
Confidence 89999998555554443 4444444433
No 11
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=100.00 E-value=3.2e-53 Score=503.90 Aligned_cols=502 Identities=19% Similarity=0.271 Sum_probs=370.6
Q ss_pred CcccccccccccCCCCCCccccCCC--CCcCCceEEEEEEcCCCC----------cCccccccc------cccchHHHHH
Q psy6090 17 DCHYELPIPAIVRPPSDSQAYENHE--DSRKTRHYASVVPLQGKK----------LGAPIKHIQ------NTNEHVKLKH 78 (674)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~--~te~gld~~g~~~~~~~~----------f~~~~~~~~------~~~~~~~~~~ 78 (674)
++..--..+.++.+..-....-+++ +||..+.+..+.+..+.. ..+...+.+ +.+. ..++.
T Consensus 308 ~~ilvk~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~ 386 (884)
T TIGR01522 308 KRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFYTVAV-SRILE 386 (884)
T ss_pred cCCcccchHHHHhccCccEEEecCccccccCeEEEEEEEecCceEeeccCCccCCCCcccccccccccccCHHH-HHHHH
Confidence 3444444556666666666666654 889999988886543210 000000000 0011 35777
Q ss_pred HHhhcccceec--CCcccCCHHHHHHHHHcCc-EEeC----CCCcccCCCC---CccceEecCC-CCC------------
Q psy6090 79 GMATCHSLTLI--NGELSGDPLDLKMFESTGW-TLEE----PNLKEDCHYE---LPIPAIVRPP-SGD------------ 135 (674)
Q Consensus 79 ~~a~Chsl~~~--~~~l~Gdpld~~m~~~t~~-~l~~----~~~~~~~~~~---~~~~~v~~~~-~~~------------ 135 (674)
++++||+.... +++..|||+|.+++++..+ .++. .......+|+ ++|.++++.. ++.
T Consensus 387 ~~~l~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~~~~KGape~i 466 (884)
T TIGR01522 387 AGNLCNNAKFRNEADTLLGNPTDVALIELLMKFGLDDLRETYIRVAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQV 466 (884)
T ss_pred HHhhhCCCeecCCCCCcCCChHHHHHHHHHHHcCcHhHHhhCcEEeEeCCCCCCCeEEEEEEEcCCCeEEEEEeCChHHH
Confidence 88999998654 3468899999999886532 1221 1112234555 4677766531 111
Q ss_pred cc--c-cc----------cccchHHHHHHHHHhhcCcEEEEEeeecccccchHHHhhhchhhhcccceeeeeehhccCCC
Q psy6090 136 YQ--S-VL----------ISVPENIVSVLSEYTEQGYRVIALASRTLSIDDYKHLNYMKREDIEKDLEFLGLIILENRLK 202 (674)
Q Consensus 136 lq--s-vi----------~~~p~~~~~~l~~~~~~G~Rvla~A~k~l~~~~~~~~~~~~r~~iE~dL~flGli~~en~lk 202 (674)
+. + .. +..++++.+.++.|+++|+||+|+|||.+ ++||+|+|+++++||+|
T Consensus 467 l~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~~~~----------------~~~l~~lGli~l~Dp~r 530 (884)
T TIGR01522 467 LKYCTYYQKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPE----------------KGQLTFLGLVGINDPPR 530 (884)
T ss_pred HHhhhhhhhcCCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcC----------------CCCeEEEEEEeccCcch
Confidence 00 0 00 12245677888999999999999999875 35799999999999999
Q ss_pred cchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCCCCCCCeEEEEeCCCCCCCCCCceEEEEcCcchhhhhhhhccCC
Q psy6090 203 PQTEGVIKELKDARVKVVMITGDNIQTAISVAKECGIIDPGETVVDVSAVPGGLKECPKVYFTVSGVSAIQTKAKKLNYS 282 (674)
Q Consensus 203 ~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~gi~~~~~~vi~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 282 (674)
|+++++|++||++||+++|+|||+..||.++|+++||......
T Consensus 531 ~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~~~------------------------------------- 573 (884)
T TIGR01522 531 PGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSKTSQ------------------------------------- 573 (884)
T ss_pred hHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCCc-------------------------------------
Confidence 9999999999999999999999999999999999999754322
Q ss_pred chhhhhccCCCCeEEEEcchhHHHHHhhCchhHHHHHhhccEEEecCHHHHHHHHHHHHHcCCEEEEeCCCccchhhhhh
Q psy6090 283 KTEEELGLSSGAYKFAVTGKSWELIRDQMPELIPRIIVKGAIFARMSSDQKQQLVLELQQLGYYVAMCGDGANDCGALRA 362 (674)
Q Consensus 283 ~~~~~~~~~~~~~~l~itG~~~~~i~~~~~~~~~~i~~~~~VfaR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~aLk~ 362 (674)
+++|+.++.+. .+.+.+++.+..||||++|+||..+|+.+|+.|+.|+|+|||.||++|||+
T Consensus 574 ---------------~v~g~~l~~~~---~~~l~~~~~~~~Vfar~~P~~K~~iv~~lq~~g~~v~mvGDGvND~pAl~~ 635 (884)
T TIGR01522 574 ---------------SVSGEKLDAMD---DQQLSQIVPKVAVFARASPEHKMKIVKALQKRGDVVAMTGDGVNDAPALKL 635 (884)
T ss_pred ---------------eeEhHHhHhCC---HHHHHHHhhcCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHHh
Confidence 23455554332 245667778889999999999999999999999999999999999999999
Q ss_pred CCcceeecCCcccc---ccCccccccchhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH--HHHHHhhcCCCchhHH
Q psy6090 363 AHAGISLSEAESSV---ASPFTSTVANISCVLRIIREGRAALVTSFGIFKFMVLYSLCEFFS--TMILYTIDSNLTDFEF 437 (674)
Q Consensus 363 AdvGIams~aeasv---AAdf~s~~~~i~~V~~~I~eGR~~l~ts~~~~k~~~~~~l~~~~~--~~~l~~~~~~l~~~q~ 437 (674)
|||||||+...+++ +||+++.+++++++++++++||+++.+..+.+.|....++..+.. +..++..+.|++++|+
T Consensus 636 AdVGia~g~~g~~va~~aaDivl~dd~~~~i~~~i~~gR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qi 715 (884)
T TIGR01522 636 ADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNNIKNFITFQLSTSVAALSLIALATLMGFPNPLNAMQI 715 (884)
T ss_pred CCeeEecCCCcCHHHHHhcCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCCCchhHHHH
Confidence 99999998655555 699999999999999999999999998888888877766665443 3345667789999999
Q ss_pred HHHHHHHHHHHHHHHccCCCCCCCCcCCCC---CCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccCCCCc
Q psy6090 438 LYIDIALVVNFAFFFGRNHAFSGPLTSETP---LNSLFSYVTLLSMFFQLILMVSMQIISFIIVHKFAWFEPFVYTNAIS 514 (674)
Q Consensus 438 L~idl~~~~~~~~~l~~~~p~~~~L~~~~P---~~~l~s~~~~~si~~q~~i~~~~~~~~~~~~~~~~w~~~~~~~~~~~ 514 (674)
||+|++++.+++++++.++|.+ .+++++| ..+++++.++..++.++++.+++.++.|.+.. +.. .
T Consensus 716 L~inl~~d~~~a~~l~~e~~~~-~~m~~~P~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~----~~~-------~ 783 (884)
T TIGR01522 716 LWINILMDGPPAQSLGVEPVDK-DVMRKPPRPRNDKILTKDLIKKILVSAIIIVVGTLFVFVREM----QDG-------V 783 (884)
T ss_pred HHHHHHHHhhHHHHhccCCCCh-hHhhCCCCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHH----cCC-------c
Confidence 9999999999999999999999 8998888 45899999999999999887766655554321 100 0
Q ss_pred cCcchhhHHH-HHHHHHHHHHHHHhcCCCC-cccccccchhHHHHHHHHHHHHHHhhcccchhhhhcceecCCCCCcHHH
Q psy6090 515 YSCYENYAVF-SISMFQYIILAITFSQGKP-YRTPIYKNKLFILSIIIMTWVCIYITLIPSEFIIQFLQLRFPPNMQFPL 592 (674)
Q Consensus 515 ~~~~~~t~~f-~~~~~q~~~~~~v~s~g~p-fr~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~p~~~~~~ 592 (674)
......|++| .++++|.++.+.+++.+.+ |+.++++|+++++++++.+++++++++. |+++.+|++.+++...| +
T Consensus 784 ~~~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--p~~~~~f~~~~l~~~~w-~ 860 (884)
T TIGR01522 784 ITARDTTMTFTCFVFFDMFNALACRSQTKSVFEIGFFSNRMFNYAVGGSIIGQLLVIYF--PPLQSVFQTEALSIKDL-L 860 (884)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHccCCccccccCcccCHHHHHHHHHHHHHHHHHHHH--HHHHHHHcCCCCCHHHH-H
Confidence 1122357777 4667899898888886544 7667889999999999988888877764 67899999999883334 3
Q ss_pred HHHHHHHHHHHHH
Q psy6090 593 IVIYLAICNFVLS 605 (674)
Q Consensus 593 ~l~~~~~~~~~~~ 605 (674)
.+++++++.+++.
T Consensus 861 ~~~~~~~~~~~~~ 873 (884)
T TIGR01522 861 FLLLITSSVCIVD 873 (884)
T ss_pred HHHHHHHHHHHHH
Confidence 3444444444443
No 12
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=100.00 E-value=1.7e-52 Score=494.98 Aligned_cols=501 Identities=18% Similarity=0.190 Sum_probs=351.3
Q ss_pred CCcccccccccccCCCCCCccccCCC--CCcCCceEEEEEEcCCCCcCccccccccccchHHHHHHHhhcccceecCCcc
Q psy6090 16 EDCHYELPIPAIVRPPSDSQAYENHE--DSRKTRHYASVVPLQGKKLGAPIKHIQNTNEHVKLKHGMATCHSLTLINGEL 93 (674)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~te~gld~~g~~~~~~~~f~~~~~~~~~~~~~~~~~~~~a~Chsl~~~~~~l 93 (674)
..+..--..+.++.+..-....-+++ +|+..+.+..+.+..+. +. +.++...++|-.. .. -
T Consensus 354 k~~ilVk~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~~~~~~------------~~-~~ll~~a~l~~~~--~~--~ 416 (902)
T PRK10517 354 KQKVIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTDISGK------------TS-ERVLHSAWLNSHY--QT--G 416 (902)
T ss_pred hCCcEEecchhhhhccCCCEEEecCCCccccceEEEEEEecCCCC------------CH-HHHHHHHHhcCCc--CC--C
Confidence 34444455566666666666555554 89999998876432211 11 3444444443222 12 2
Q ss_pred cCCHHHHHHHHHcCcEEeC-----CCCcccCCCC---CccceEecCCCCCc----c----ccc----------------c
Q psy6090 94 SGDPLDLKMFESTGWTLEE-----PNLKEDCHYE---LPIPAIVRPPSGDY----Q----SVL----------------I 141 (674)
Q Consensus 94 ~Gdpld~~m~~~t~~~l~~-----~~~~~~~~~~---~~~~~v~~~~~~~l----q----svi----------------~ 141 (674)
.|||+|.+++++.+..... ....+..+|+ +.|+++++..++.. + .+. +
T Consensus 417 ~~~p~d~All~~a~~~~~~~~~~~~~~~~~~pFds~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~ 496 (902)
T PRK10517 417 LKNLLDTAVLEGVDEESARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRHNGEIVPLDD 496 (902)
T ss_pred CCCHHHHHHHHHHHhcchhhhhhcCceEEEeeeCCCcceEEEEEEECCCeEEEEEeCchHHHHHhchhhhcCCCeecCCH
Confidence 6999999998876432111 0111223454 35777766322210 0 000 1
Q ss_pred ccchHHHHHHHHHhhcCcEEEEEeeecccccchHHHhhhchhhhcccceeeeeehhccCCCcchHHHHHHHHhcCCeEEE
Q psy6090 142 SVPENIVSVLSEYTEQGYRVIALASRTLSIDDYKHLNYMKREDIEKDLEFLGLIILENRLKPQTEGVIKELKDARVKVVM 221 (674)
Q Consensus 142 ~~p~~~~~~l~~~~~~G~Rvla~A~k~l~~~~~~~~~~~~r~~iE~dL~flGli~~en~lk~~t~~~I~~L~~agIrvvm 221 (674)
...+++.+..+.|+++|+||+|+|||+++..+. ...+ ..|+||+|+|+++|+||+||+++++|++|+++||+++|
T Consensus 497 ~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~----~~~~-~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~aGI~v~m 571 (902)
T PRK10517 497 IMLRRIKRVTDTLNRQGLRVVAVATKYLPAREG----DYQR-ADESDLILEGYIAFLDPPKETTAPALKALKASGVTVKI 571 (902)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEEEecCCcccc----cccc-ccccCceeeehHhhhCcchhhHHHHHHHHHHCCCEEEE
Confidence 123457777889999999999999999873221 1122 24899999999999999999999999999999999999
Q ss_pred EcCCCHhhHHHHHHHcCCCCCCCeEEEEeCCCCCCCCCCceEEEEcCcchhhhhhhhccCCchhhhhccCCCCeEEEEcc
Q psy6090 222 ITGDNIQTAISVAKECGIIDPGETVVDVSAVPGGLKECPKVYFTVSGVSAIQTKAKKLNYSKTEEELGLSSGAYKFAVTG 301 (674)
Q Consensus 222 iTGDn~~TA~~vA~~~gi~~~~~~vi~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~itG 301 (674)
+||||+.||.+||+++||.. +. +++|
T Consensus 572 iTGD~~~tA~~IA~~lGI~~--~~----------------------------------------------------v~~G 597 (902)
T PRK10517 572 LTGDSELVAAKVCHEVGLDA--GE----------------------------------------------------VLIG 597 (902)
T ss_pred EcCCCHHHHHHHHHHcCCCc--cC----------------------------------------------------ceeH
Confidence 99999999999999999942 11 3556
Q ss_pred hhHHHHHhhCchhHHHHHhhccEEEecCHHHHHHHHHHHHHcCCEEEEeCCCccchhhhhhCCcceeecCCcccc---cc
Q psy6090 302 KSWELIRDQMPELIPRIIVKGAIFARMSSDQKQQLVLELQQLGYYVAMCGDGANDCGALRAAHAGISLSEAESSV---AS 378 (674)
Q Consensus 302 ~~~~~i~~~~~~~~~~i~~~~~VfaR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~aLk~AdvGIams~aeasv---AA 378 (674)
+.++.+. .+++.+.+.+..||||++|+||.++|+.+|+.|++|+|+|||.||++|||+|||||||+ +.+++ ||
T Consensus 598 ~el~~l~---~~el~~~~~~~~VfAr~sPe~K~~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGIAmg-~gtdvAkeaA 673 (902)
T PRK10517 598 SDIETLS---DDELANLAERTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVD-GAVDIAREAA 673 (902)
T ss_pred HHHHhCC---HHHHHHHHhhCcEEEEcCHHHHHHHHHHHHHCCCEEEEECCCcchHHHHHhCCEEEEeC-CcCHHHHHhC
Confidence 6665443 35677778889999999999999999999999999999999999999999999999999 45566 69
Q ss_pred CccccccchhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHH--HHhhcCCCchhHHHHHHHHHHHHHHHHHccCC
Q psy6090 379 PFTSTVANISCVLRIIREGRAALVTSFGIFKFMVLYSLCEFFSTMI--LYTIDSNLTDFEFLYIDIALVVNFAFFFGRNH 456 (674)
Q Consensus 379 df~s~~~~i~~V~~~I~eGR~~l~ts~~~~k~~~~~~l~~~~~~~~--l~~~~~~l~~~q~L~idl~~~~~~~~~l~~~~ 456 (674)
|+++.++++.+|++++++||+++.+..+..+|.+..++.+.+++++ ++....|+++.|+||+|++++ +++++++.++
T Consensus 674 DiVLldd~~~~I~~ai~~gR~i~~nI~k~i~~~ls~n~~~v~~~~~~~~~~~~~pl~~~qiL~inl~~D-~~~~al~~d~ 752 (902)
T PRK10517 674 DIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTASSNFGNVFSVLVASAFLPFLPMLPLHLLIQNLLYD-VSQVAIPFDN 752 (902)
T ss_pred CEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHH-HhHHhhcCCC
Confidence 9999999999999999999999998888888877777766655543 333336899999999999999 5799999999
Q ss_pred CCCCCCcCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhc-ccccccccCCCCccCcchhhHHHH-HHHHHHHHH
Q psy6090 457 AFSGPLTSETPLNSLFSYVTLLSMFFQLILMVSMQIISFIIVHKF-AWFEPFVYTNAISYSCYENYAVFS-ISMFQYIIL 534 (674)
Q Consensus 457 p~~~~L~~~~P~~~l~s~~~~~si~~q~~i~~~~~~~~~~~~~~~-~w~~~~~~~~~~~~~~~~~t~~f~-~~~~q~~~~ 534 (674)
|.+ .++++||.-+. ......++..+.+.+++.+..|++.... .|..+ .......++.|. +.+.|.+++
T Consensus 753 ~~~-~~m~~p~r~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~F~~~~~~q~~~~ 822 (902)
T PRK10517 753 VDD-EQIQKPQRWNP--ADLGRFMVFFGPISSIFDILTFCLMWWVFHANTP-------ETQTLFQSGWFVVGLLSQTLIV 822 (902)
T ss_pred CCh-hhhcCCCCCCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHccccch-------hhHhHHHHHHHHHHHHHHHHHH
Confidence 999 88888776111 1122334444454444444444332111 11100 000112344464 556788888
Q ss_pred HHHhcCCCCcccccccchhHHHHHHHHHHHHHHhhcccchhhhhcceecCCCCCcHHHHHHHHHHHHHHHHHHHHHHH
Q psy6090 535 AITFSQGKPYRTPIYKNKLFILSIIIMTWVCIYITLIPSEFIIQFLQLRFPPNMQFPLIVIYLAICNFVLSLFIENFI 612 (674)
Q Consensus 535 ~~v~s~g~pfr~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~p~~~~~~~l~~~~~~~~~~~~~~e~~~ 612 (674)
+.+++.+. ++++|++.+..+++.++++++.++.|+++++.+|++.++| ..|..+++++.+.++++..+.++.+
T Consensus 823 ~~~R~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~e~~K~~~ 895 (902)
T PRK10517 823 HMIRTRRI----PFIQSRAAWPLMIMTLIVMAVGIALPFSPLASYLQLQALP-LSYFPWLVAILAGYMTLTQLVKGFY 895 (902)
T ss_pred HhhccCCC----CcccchHHHHHHHHHHHHHHHHHHhhHHHHHHhhCCcCCC-hhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88887654 4568888888888888888888888777899999999998 5555555555555555544444443
No 13
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=100.00 E-value=1.1e-52 Score=497.18 Aligned_cols=501 Identities=14% Similarity=0.176 Sum_probs=347.8
Q ss_pred CCcccccccccccCCCCCCccccCCC--CCcCCceEEEEEEcCCCCcCccccccccccchHHHHHHHhhcccceecCCcc
Q psy6090 16 EDCHYELPIPAIVRPPSDSQAYENHE--DSRKTRHYASVVPLQGKKLGAPIKHIQNTNEHVKLKHGMATCHSLTLINGEL 93 (674)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~te~gld~~g~~~~~~~~f~~~~~~~~~~~~~~~~~~~~a~Chsl~~~~~~l 93 (674)
..+.+--..+.++.+..-+...-+++ +||..+.+..+.+..+.. . +.++...++| +.. ..-
T Consensus 352 k~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~~~~~~~------------~-~~~l~~a~l~-s~~---~~~ 414 (903)
T PRK15122 352 RRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHLDVSGRK------------D-ERVLQLAWLN-SFH---QSG 414 (903)
T ss_pred HcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEEcCCCCC------------h-HHHHHHHHHh-CCC---CCC
Confidence 34445555566666666666665655 899999998876543210 1 2344433332 110 123
Q ss_pred cCCHHHHHHHHHcCcEE-e----CCCCcccCCCC---CccceEecCCCCCc--------ccc------c----------c
Q psy6090 94 SGDPLDLKMFESTGWTL-E----EPNLKEDCHYE---LPIPAIVRPPSGDY--------QSV------L----------I 141 (674)
Q Consensus 94 ~Gdpld~~m~~~t~~~l-~----~~~~~~~~~~~---~~~~~v~~~~~~~l--------qsv------i----------~ 141 (674)
.|||+|.+++++....- . .....+..+|+ ++|+++++..++.. +.+ + +
T Consensus 415 ~~~p~e~All~~a~~~~~~~~~~~~~~~~~~pF~s~~k~ms~v~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~ 494 (903)
T PRK15122 415 MKNLMDQAVVAFAEGNPEIVKPAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVRDGDTVRPLDE 494 (903)
T ss_pred CCChHHHHHHHHHHHcCchhhhhcCceEEEeeeCCCcCEEEEEEEcCCCcEEEEECCcHHHHHHhchhhhcCCCeecCCH
Confidence 79999999988764321 1 01111223455 35677776422210 000 0 1
Q ss_pred ccchHHHHHHHHHhhcCcEEEEEeeecccccchHHHhhhchhhhcccceeeeeehhccCCCcchHHHHHHHHhcCCeEEE
Q psy6090 142 SVPENIVSVLSEYTEQGYRVIALASRTLSIDDYKHLNYMKREDIEKDLEFLGLIILENRLKPQTEGVIKELKDARVKVVM 221 (674)
Q Consensus 142 ~~p~~~~~~l~~~~~~G~Rvla~A~k~l~~~~~~~~~~~~r~~iE~dL~flGli~~en~lk~~t~~~I~~L~~agIrvvm 221 (674)
..++.+.+.++.|+++|+||+|+|||.++..+. ....+++.|+||+|+|+++|+||+||+++++|++||++||+++|
T Consensus 495 ~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~---~~~~~~~~e~~l~~lGli~l~Dp~R~~a~~aI~~l~~aGI~v~m 571 (903)
T PRK15122 495 ARRERLLALAEAYNADGFRVLLVATREIPGGES---RAQYSTADERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKV 571 (903)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEEEEeccCcccc---ccccccccccCcEEEEEEeccCccHHHHHHHHHHHHHCCCeEEE
Confidence 113456778899999999999999999874221 11234457899999999999999999999999999999999999
Q ss_pred EcCCCHhhHHHHHHHcCCCCCCCeEEEEeCCCCCCCCCCceEEEEcCcchhhhhhhhccCCchhhhhccCCCCeEEEEcc
Q psy6090 222 ITGDNIQTAISVAKECGIIDPGETVVDVSAVPGGLKECPKVYFTVSGVSAIQTKAKKLNYSKTEEELGLSSGAYKFAVTG 301 (674)
Q Consensus 222 iTGDn~~TA~~vA~~~gi~~~~~~vi~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~itG 301 (674)
+||||+.||.++|++|||.. +. +++|
T Consensus 572 iTGD~~~tA~aIA~~lGI~~--~~----------------------------------------------------vi~G 597 (903)
T PRK15122 572 LTGDNPIVTAKICREVGLEP--GE----------------------------------------------------PLLG 597 (903)
T ss_pred ECCCCHHHHHHHHHHcCCCC--CC----------------------------------------------------ccch
Confidence 99999999999999999942 11 3556
Q ss_pred hhHHHHHhhCchhHHHHHhhccEEEecCHHHHHHHHHHHHHcCCEEEEeCCCccchhhhhhCCcceeecCCcccc---cc
Q psy6090 302 KSWELIRDQMPELIPRIIVKGAIFARMSSDQKQQLVLELQQLGYYVAMCGDGANDCGALRAAHAGISLSEAESSV---AS 378 (674)
Q Consensus 302 ~~~~~i~~~~~~~~~~i~~~~~VfaR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~aLk~AdvGIams~aeasv---AA 378 (674)
+.++.+. .+++.+.+.++.||||++|+||.++|+.+|+.|++|+|+|||.||++|||+|||||||+ .++++ ||
T Consensus 598 ~el~~~~---~~el~~~v~~~~VfAr~sPe~K~~iV~~Lq~~G~vVamtGDGvNDaPALk~ADVGIAmg-~gtdvAkeaA 673 (903)
T PRK15122 598 TEIEAMD---DAALAREVEERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRDADVGISVD-SGADIAKESA 673 (903)
T ss_pred HhhhhCC---HHHHHHHhhhCCEEEEeCHHHHHHHHHHHHhCCCEEEEECCCchhHHHHHhCCEEEEeC-cccHHHHHhc
Confidence 6665543 35677778888999999999999999999999999999999999999999999999999 55666 69
Q ss_pred CccccccchhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHH--HHhhcCCCchhHHHHHHHHHHHHHHHHHccCC
Q psy6090 379 PFTSTVANISCVLRIIREGRAALVTSFGIFKFMVLYSLCEFFSTMI--LYTIDSNLTDFEFLYIDIALVVNFAFFFGRNH 456 (674)
Q Consensus 379 df~s~~~~i~~V~~~I~eGR~~l~ts~~~~k~~~~~~l~~~~~~~~--l~~~~~~l~~~q~L~idl~~~~~~~~~l~~~~ 456 (674)
|+++.++++++|++++++||+++.+..+..+|.+..++.+.+++++ ++....|+++.|+||+|+++++ ++++++.++
T Consensus 674 DiVLldd~f~~Iv~ai~~gR~i~~nI~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~~nli~D~-~~lal~~d~ 752 (903)
T PRK15122 674 DIILLEKSLMVLEEGVIKGRETFGNIIKYLNMTASSNFGNVFSVLVASAFIPFLPMLAIHLLLQNLMYDI-SQLSLPWDK 752 (903)
T ss_pred CEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHH-HHHhhcCCC
Confidence 9999999999999999999999998777777776666655444332 3334478999999999999996 899999999
Q ss_pred CCCCCCcCCCCC---CCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccCCCCccCcchhhHHHH-HHHHHHH
Q psy6090 457 AFSGPLTSETPL---NSLFSYVTLLSMFFQLILMVSMQIISFIIVHKFAWFEPFVYTNAISYSCYENYAVFS-ISMFQYI 532 (674)
Q Consensus 457 p~~~~L~~~~P~---~~l~s~~~~~si~~q~~i~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~t~~f~-~~~~q~~ 532 (674)
|.+ .++ ++|. .+++++.++. .+.+.+++.+..|+.... ++. .. . ....+...|+.|. +.+.|.+
T Consensus 753 ~~~-~~m-~~P~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~--~~~-~~--~-~~~~~~~~t~~f~~l~~~q~~ 820 (903)
T PRK15122 753 MDK-EFL-RKPRKWDAKNIGRFMLW----IGPTSSIFDITTFALMWF--VFA-AN--S-VEMQALFQSGWFIEGLLSQTL 820 (903)
T ss_pred CCH-hhc-CCCCCCChhhhHHHHHH----HHHHHHHHHHHHHHHHHH--Hhc-cC--c-HhhhhhhHHHHHHHHHHHHHH
Confidence 999 787 6663 4677775443 222222222222222110 000 00 0 0001123456674 5567888
Q ss_pred HHHHHhcCCCCcccccccchhHHHHHHHHHHHHHHhhcccchhhhhcceecCCCCCcHHHHHHHHHHHHHHHHHHHHHHH
Q psy6090 533 ILAITFSQGKPYRTPIYKNKLFILSIIIMTWVCIYITLIPSEFIIQFLQLRFPPNMQFPLIVIYLAICNFVLSLFIENFI 612 (674)
Q Consensus 533 ~~~~v~s~g~pfr~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~p~~~~~~~l~~~~~~~~~~~~~~e~~~ 612 (674)
+++.+++.+.| +++|++.+..+++.+++++++++.|+.+++.+|++.++| ..++.+++++.++.+++..+.++++
T Consensus 821 ~~~~~R~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~~~l~-~~~~~~~~~~~~~~~~~~e~~k~~~ 895 (903)
T PRK15122 821 VVHMLRTQKIP----FIQSTAALPVLLTTGLIMAIGIYIPFSPLGAMVGLEPLP-WSYFPWLAATLLGYCLVAQGMKRFY 895 (903)
T ss_pred HHHhhCcCCCC----cCcchHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCCCC-HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888887543 456777677777777777777776654588999999999 5555555556666665555555443
No 14
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=100.00 E-value=8.6e-52 Score=489.10 Aligned_cols=498 Identities=16% Similarity=0.156 Sum_probs=347.4
Q ss_pred CCCcccccccccccCCCCCCccccCCC--CCcCCceEEEEEEcCCCCcCccccccccccchHHHHHHHhhcccceecCCc
Q psy6090 15 KEDCHYELPIPAIVRPPSDSQAYENHE--DSRKTRHYASVVPLQGKKLGAPIKHIQNTNEHVKLKHGMATCHSLTLINGE 92 (674)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~te~gld~~g~~~~~~~~f~~~~~~~~~~~~~~~~~~~~a~Chsl~~~~~~ 92 (674)
..++.+--..+.++.+..-+...-+++ +|+..+.+.++.+..+. .. ..++...++|... + +
T Consensus 318 ak~~ilvk~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~~~~~------------~~-~~~l~~a~l~~~~---~-~ 380 (867)
T TIGR01524 318 SKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIELEKHIDSSGE------------TS-ERVLKMAWLNSYF---Q-T 380 (867)
T ss_pred HhCCcEEccchhhhhccCccEEEecCCCccccCeEEEEEEecCCCC------------CH-HHHHHHHHHhCCC---C-C
Confidence 445556566667777776666666655 89999999887643321 11 3444443433222 1 2
Q ss_pred ccCCHHHHHHHHHcCcEE-e----CCCCcccCCCC---CccceEecCCCCC----cc----ccc----------------
Q psy6090 93 LSGDPLDLKMFESTGWTL-E----EPNLKEDCHYE---LPIPAIVRPPSGD----YQ----SVL---------------- 140 (674)
Q Consensus 93 l~Gdpld~~m~~~t~~~l-~----~~~~~~~~~~~---~~~~~v~~~~~~~----lq----svi---------------- 140 (674)
..|||+|.+++++..... . .....+..+|+ +.|+++++..++. .+ .++
T Consensus 381 ~~~~p~~~Al~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~ms~~v~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~ 460 (867)
T TIGR01524 381 GWKNVLDHAVLAKLDESAARQTASRWKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRFGGAVVTLS 460 (867)
T ss_pred CCCChHHHHHHHHHHhhchhhHhhcCceEEEeccCCCcCEEEEEEEcCCceEEEEEeCcHHHHHHhchhhhcCCceecCC
Confidence 368999999987654210 0 00111223454 3577777643221 00 000
Q ss_pred cccchHHHHHHHHHhhcCcEEEEEeeecccccchHHHhhhchhhhcccceeeeeehhccCCCcchHHHHHHHHhcCCeEE
Q psy6090 141 ISVPENIVSVLSEYTEQGYRVIALASRTLSIDDYKHLNYMKREDIEKDLEFLGLIILENRLKPQTEGVIKELKDARVKVV 220 (674)
Q Consensus 141 ~~~p~~~~~~l~~~~~~G~Rvla~A~k~l~~~~~~~~~~~~r~~iE~dL~flGli~~en~lk~~t~~~I~~L~~agIrvv 220 (674)
+..++++.+.++.|+++|+||+|+|||+++..+. ...+ +.|+||+|+|+++|+||+||+++++|++||++||+++
T Consensus 461 ~~~~~~i~~~~~~~a~~G~rvlavA~~~~~~~~~----~~~~-~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~aGI~vv 535 (867)
T TIGR01524 461 ESEKSELQDMTAEMNRQGIRVIAVATKTLKVGEA----DFTK-TDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVK 535 (867)
T ss_pred HHHHHHHHHHHHHHHhcCCEEEEEEEeccCcccc----cccc-cccCCcEEEEEEEeeCCCchhHHHHHHHHHHCCCEEE
Confidence 1234567888899999999999999999874221 1222 2489999999999999999999999999999999999
Q ss_pred EEcCCCHhhHHHHHHHcCCCCCCCeEEEEeCCCCCCCCCCceEEEEcCcchhhhhhhhccCCchhhhhccCCCCeEEEEc
Q psy6090 221 MITGDNIQTAISVAKECGIIDPGETVVDVSAVPGGLKECPKVYFTVSGVSAIQTKAKKLNYSKTEEELGLSSGAYKFAVT 300 (674)
Q Consensus 221 miTGDn~~TA~~vA~~~gi~~~~~~vi~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~it 300 (674)
|+||||..||.++|+++||.++ . +++
T Consensus 536 miTGD~~~tA~aIA~~lGI~~~--~----------------------------------------------------v~~ 561 (867)
T TIGR01524 536 VLTGDNEIVTARICQEVGIDAN--D----------------------------------------------------FLL 561 (867)
T ss_pred EEcCCCHHHHHHHHHHcCCCCC--C----------------------------------------------------eee
Confidence 9999999999999999999521 1 234
Q ss_pred chhHHHHHhhCchhHHHHHhhccEEEecCHHHHHHHHHHHHHcCCEEEEeCCCccchhhhhhCCcceeecCCcccc---c
Q psy6090 301 GKSWELIRDQMPELIPRIIVKGAIFARMSSDQKQQLVLELQQLGYYVAMCGDGANDCGALRAAHAGISLSEAESSV---A 377 (674)
Q Consensus 301 G~~~~~i~~~~~~~~~~i~~~~~VfaR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~aLk~AdvGIams~aeasv---A 377 (674)
|..++.+. .+.+.+.+.++.||||++|+||.++|+.+|+.|++|+|+|||.||++|||+|||||||++ .+++ |
T Consensus 562 g~~l~~~~---~~el~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIAmg~-gtdvAk~a 637 (867)
T TIGR01524 562 GADIEELS---DEELARELRKYHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVDT-AADIAKEA 637 (867)
T ss_pred cHhhhhCC---HHHHHHHhhhCeEEEECCHHHHHHHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEEeCC-ccHHHHHh
Confidence 54444332 245667778889999999999999999999999999999999999999999999999994 4555 6
Q ss_pred cCccccccchhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHH--HHhhcCCCchhHHHHHHHHHHHHHHHHHccC
Q psy6090 378 SPFTSTVANISCVLRIIREGRAALVTSFGIFKFMVLYSLCEFFSTMI--LYTIDSNLTDFEFLYIDIALVVNFAFFFGRN 455 (674)
Q Consensus 378 Adf~s~~~~i~~V~~~I~eGR~~l~ts~~~~k~~~~~~l~~~~~~~~--l~~~~~~l~~~q~L~idl~~~~~~~~~l~~~ 455 (674)
||+++.++++++|++++++||+++.+..+..+|.+..++...+++++ ++....|+++.|+||+|++++ +++++++.+
T Consensus 638 ADiVLldd~~~~I~~ai~~gR~i~~ni~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~inl~~d-~~~~al~~~ 716 (867)
T TIGR01524 638 SDIILLEKSLMVLEEGVIEGRNTFGNILKYLKMTASSNFGNVFSVLVASAFIPFLPMLSLHLLIQNLLYD-FSQLTLPWD 716 (867)
T ss_pred CCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH-HHHHhhcCC
Confidence 99999999999999999999999998888888877666665554433 333347899999999999999 699999999
Q ss_pred CCCCCCCcCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccCCCCccCcchhhHHHH-HHHHHHHHH
Q psy6090 456 HAFSGPLTSETPLNSLFSYVTLLSMFFQLILMVSMQIISFIIVHKFAWFEPFVYTNAISYSCYENYAVFS-ISMFQYIIL 534 (674)
Q Consensus 456 ~p~~~~L~~~~P~~~l~s~~~~~si~~q~~i~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~t~~f~-~~~~q~~~~ 534 (674)
+|.+ .++++||+.+. +.....++..+++.+++.+..|+......+... ........|+.|. +.+.|.+++
T Consensus 717 ~~~~-~~m~~p~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~t~~f~~~~~~~~~~~ 787 (867)
T TIGR01524 717 KMDR-EFLKKPHQWEQ--KGMGRFMLCIGPVSSIFDIATFLLMWFVFSANT------VEEQALFQSGWFVVGLLSQTLVV 787 (867)
T ss_pred CCCh-HhhCCCCCCCh--hhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc------hhhhhHHHHHHHHHHHHHHHHHH
Confidence 9999 78875554222 233333444444444444433333211111000 0001123466674 556788888
Q ss_pred HHHhcCCCCcccccccchhHHHHHHHHHHHHHHhhcccchhhhhcceecCCCCCcHHHHHHHHHHHHHHHHHH
Q psy6090 535 AITFSQGKPYRTPIYKNKLFILSIIIMTWVCIYITLIPSEFIIQFLQLRFPPNMQFPLIVIYLAICNFVLSLF 607 (674)
Q Consensus 535 ~~v~s~g~pfr~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~p~~~~~~~l~~~~~~~~~~~~~ 607 (674)
+.+++.+. ++++|++++.++++.+++++++++.|..+++.+|++.++| ..|..+++.+.+..+++..+
T Consensus 788 ~~~R~~~~----~~~~n~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~~~l~-~~~~~~~~~~~~~~~~~~e~ 855 (867)
T TIGR01524 788 HMIRTEKI----PFIQSRAAAPVMIATLLVMALGIIIPFSPLGHSIGLVSLP-LSYFPWLIAILVGYMATMQL 855 (867)
T ss_pred HhhCcCCC----CcCcchHHHHHHHHHHHHHHHHHHhchhhhhhhhccccCC-ccHHHHHHHHHHHHHHHHHH
Confidence 88887754 4467999999998888888888887654468899999987 55555555555444433333
No 15
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=100.00 E-value=8.9e-51 Score=491.38 Aligned_cols=412 Identities=21% Similarity=0.316 Sum_probs=296.5
Q ss_pred HHHHHHHhhcccceecC--Cc---c---cCCHHHHHHHHH---cCcEEeCCCC------------------cccCCCC--
Q psy6090 74 VKLKHGMATCHSLTLIN--GE---L---SGDPLDLKMFES---TGWTLEEPNL------------------KEDCHYE-- 122 (674)
Q Consensus 74 ~~~~~~~a~Chsl~~~~--~~---l---~Gdpld~~m~~~---t~~~l~~~~~------------------~~~~~~~-- 122 (674)
..++.++++||++.... ++ + .|||.|.+++++ .||.+...+. ....+|+
T Consensus 441 ~~~l~~l~lC~~v~~~~~~~~~~~~~y~~~sp~E~ALl~~a~~~g~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~s~ 520 (1057)
T TIGR01652 441 NEFFLALALCHTVVPEFNDDGPEEITYQAASPDEAALVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSD 520 (1057)
T ss_pred HHHHHHHHhcCcccccccCCCCCceEEEccCCcHHHHHHHHHHCCCEEEEecCCceEEEEEeCCCEEEEEEEEecccCCC
Confidence 46889999999998752 22 1 599999999864 4887653211 0123565
Q ss_pred -CccceEecCCCCCc----c---ccc--------cccchHHHHHHHHHhhcCcEEEEEeeecccccchHHHhh-------
Q psy6090 123 -LPIPAIVRPPSGDY----Q---SVL--------ISVPENIVSVLSEYTEQGYRVIALASRTLSIDDYKHLNY------- 179 (674)
Q Consensus 123 -~~~~~v~~~~~~~l----q---svi--------~~~p~~~~~~l~~~~~~G~Rvla~A~k~l~~~~~~~~~~------- 179 (674)
++|+++++.+++.. + +++ +..++.+.+.+++|+++|+||||+|||.++++++.++..
T Consensus 521 rKrmSviv~~~~~~~~l~~KGA~e~il~~~~~~~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~ 600 (1057)
T TIGR01652 521 RKRMSVIVRNPDGRIKLLCKGADTVIFKRLSSGGNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEAST 600 (1057)
T ss_pred CCeEEEEEEeCCCeEEEEEeCcHHHHHHHhhccchhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHh
Confidence 47899998544321 1 222 224567889999999999999999999998654433211
Q ss_pred --hc--------hhhhcccceeeeeehhccCCCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCCCCCCCeEEEE
Q psy6090 180 --MK--------REDIEKDLEFLGLIILENRLKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKECGIIDPGETVVDV 249 (674)
Q Consensus 180 --~~--------r~~iE~dL~flGli~~en~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~gi~~~~~~vi~~ 249 (674)
.. ++++|+||+|+|++++|||||++++++|++||+||||+||+|||+++||++||++||+++++..++.+
T Consensus 601 ~~~~r~~~~~~~~~~iE~~L~~lG~~gieD~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i 680 (1057)
T TIGR01652 601 ALTDREEKLDVVAESIEKDLILLGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVI 680 (1057)
T ss_pred hhhhHHHHHHHHHHHHHhcCEEEEEEEEhhhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEE
Confidence 01 25789999999999999999999999999999999999999999999999999999999887777666
Q ss_pred eCCCCCCCCCCceEEEEcCcchhhhhhhhccCCchhhhhccCCCCeEEEEcchhHHHHHhhC-chhHHHHHhhc--cEEE
Q psy6090 250 SAVPGGLKECPKVYFTVSGVSAIQTKAKKLNYSKTEEELGLSSGAYKFAVTGKSWELIRDQM-PELIPRIIVKG--AIFA 326 (674)
Q Consensus 250 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~itG~~~~~i~~~~-~~~~~~i~~~~--~Vfa 326 (674)
+....+... ..+. ... ..................+.++++|++++.+.++. .+.+.+++.++ +|||
T Consensus 681 ~~~~~~~~~-------~~~~-~i~---~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~a 749 (1057)
T TIGR01652 681 TSESLDATR-------SVEA-AIK---FGLEGTSEEFNNLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICC 749 (1057)
T ss_pred ecCchhhhH-------HHHH-HHH---HHHHHHHHhhhhhccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEe
Confidence 543211000 0000 000 00000000000011235678999999999776532 33455566554 5999
Q ss_pred ecCHHHHHHHHHHHHHc-CCEEEEeCCCccchhhhhhCCcceeecCCcc---ccccCccccccchhHHHHHH-HHhhHHH
Q psy6090 327 RMSSDQKQQLVLELQQL-GYYVAMCGDGANDCGALRAAHAGISLSEAES---SVASPFTSTVANISCVLRII-REGRAAL 401 (674)
Q Consensus 327 R~sP~qK~~iV~~lq~~-g~~V~m~GDG~ND~~aLk~AdvGIams~aea---svAAdf~s~~~~i~~V~~~I-~eGR~~l 401 (674)
|++|+||+++|+.+|+. |++|+|||||+||++|||+|||||++++.|. ..||||++.+ ++.+.++| .|||.++
T Consensus 750 R~sP~qK~~IV~~lk~~~~~~vl~iGDG~ND~~mlk~AdVGIgi~g~eg~qA~~aaD~~i~~--F~~L~~lll~~GR~~~ 827 (1057)
T TIGR01652 750 RVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGVGISGKEGMQAVMASDFAIGQ--FRFLTKLLLVHGRWSY 827 (1057)
T ss_pred CCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHHhhcCeeeEecChHHHHHHHhhhhhhhh--HHHHHHHHHhhCHHHH
Confidence 99999999999999998 9999999999999999999999999998884 4479999874 99999987 8999999
Q ss_pred HHHHHHHHHHHHHHHHH----HHHHHH-HHhhcCCCchhHHHHHHHHHHHHHHHHHcc-CCCCCCCCcCCCCC-------
Q psy6090 402 VTSFGIFKFMVLYSLCE----FFSTMI-LYTIDSNLTDFEFLYIDIALVVNFAFFFGR-NHAFSGPLTSETPL------- 468 (674)
Q Consensus 402 ~ts~~~~k~~~~~~l~~----~~~~~~-l~~~~~~l~~~q~L~idl~~~~~~~~~l~~-~~p~~~~L~~~~P~------- 468 (674)
.+.-....|...-++.. ++..+. .+...+++.+++++|+|++++.+|++++|. +++.+.+++.++|.
T Consensus 828 ~r~~~~i~~~~~kn~~~~~~~~~~~~~~~~s~~~~~~~~~l~~~n~~~t~lp~~~l~~~d~~~~~~~l~~~P~ly~~~~~ 907 (1057)
T TIGR01652 828 KRISKMILYFFYKNLIFAIIQFWYSFYNGFSGQTLYEGWYMVLYNVFFTALPVISLGVFDQDVSASLSLRYPQLYREGQK 907 (1057)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhChHHHHHhhh
Confidence 88766666654434332 221111 122335688999999999999999999974 44433367777763
Q ss_pred CCccchHHHHHHHHHHHHHHHHHHHHHHHH
Q psy6090 469 NSLFSYVTLLSMFFQLILMVSMQIISFIIV 498 (674)
Q Consensus 469 ~~l~s~~~~~si~~q~~i~~~~~~~~~~~~ 498 (674)
.++++...++.+++++++++++.++..++.
T Consensus 908 ~~~~~~~~f~~~~~~~~~~~~ii~~~~~~~ 937 (1057)
T TIGR01652 908 GQGFSTKTFWGWMLDGIYQSLVIFFFPMFA 937 (1057)
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 578999999999999998887666544433
No 16
>PLN03190 aminophospholipid translocase; Provisional
Probab=100.00 E-value=1.4e-48 Score=468.61 Aligned_cols=420 Identities=16% Similarity=0.274 Sum_probs=292.8
Q ss_pred HHHHHHHhhcccceec--CC---------cccC-CHHHHHHHHHc---CcEEeCCCC----------------cccCCCC
Q psy6090 74 VKLKHGMATCHSLTLI--NG---------ELSG-DPLDLKMFEST---GWTLEEPNL----------------KEDCHYE 122 (674)
Q Consensus 74 ~~~~~~~a~Chsl~~~--~~---------~l~G-dpld~~m~~~t---~~~l~~~~~----------------~~~~~~~ 122 (674)
..++.+||+||++... ++ ++.| +|.|.++.++. |..+.+.+. -...+|+
T Consensus 533 ~~fl~~lalChtv~~~~~~~~~~~~~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~~~~~~il~~~pF~ 612 (1178)
T PLN03190 533 HDFFLALAACNTIVPIVVDDTSDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGLHEFD 612 (1178)
T ss_pred HHHHHHHHhcCCceeeccCCCCCccccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeeccceecceeEEEeccc
Confidence 4689999999999763 21 2566 99999987654 664432110 1123455
Q ss_pred ---CccceEecCCCCCc----c---ccc---------cccchHHHHHHHHHhhcCcEEEEEeeecccccchHHHhh----
Q psy6090 123 ---LPIPAIVRPPSGDY----Q---SVL---------ISVPENIVSVLSEYTEQGYRVIALASRTLSIDDYKHLNY---- 179 (674)
Q Consensus 123 ---~~~~~v~~~~~~~l----q---svi---------~~~p~~~~~~l~~~~~~G~Rvla~A~k~l~~~~~~~~~~---- 179 (674)
++|++|++.+++.. + ++| +..++.+.+.+++||++|+||||+|||.++++++.++..
T Consensus 613 S~rKrMSvIv~~~~~~~~l~~KGA~e~il~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~~~ 692 (1178)
T PLN03190 613 SDRKRMSVILGCPDKTVKVFVKGADTSMFSVIDRSLNMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEA 692 (1178)
T ss_pred ccccEEEEEEEcCCCcEEEEEecCcHHHHHhhcccccchhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHHHH
Confidence 47999998544321 1 222 235677899999999999999999999998654443321
Q ss_pred -------------hchhhhcccceeeeeehhccCCCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCCCCCCCeE
Q psy6090 180 -------------MKREDIEKDLEFLGLIILENRLKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKECGIIDPGETV 246 (674)
Q Consensus 180 -------------~~r~~iE~dL~flGli~~en~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~gi~~~~~~v 246 (674)
.-++++|+||+|+|+++++|++|++++++|++|++|||++||+|||+..||++||++|||++++...
T Consensus 693 a~~~~~~r~~~l~~~~~~iE~dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~ 772 (1178)
T PLN03190 693 ASTALIGRAALLRKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQ 772 (1178)
T ss_pred hhhhhhhhHHHHHhhHHhhhcCcEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCee
Confidence 0125789999999999999999999999999999999999999999999999999999999988776
Q ss_pred EEEeCCCCCCCCCCceEEEEcCcchhhhhhhhccCCchhhhhccCCCCeEEEEcchhHHHHHh-hCchhHHHHHhhc--c
Q psy6090 247 VDVSAVPGGLKECPKVYFTVSGVSAIQTKAKKLNYSKTEEELGLSSGAYKFAVTGKSWELIRD-QMPELIPRIIVKG--A 323 (674)
Q Consensus 247 i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~itG~~~~~i~~-~~~~~~~~i~~~~--~ 323 (674)
+.++....+... ..+.......... ....... .............+.++++|++++.+.+ +..+.+.++..++ +
T Consensus 773 i~i~~~~~~~~~-~~l~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~V 849 (1178)
T PLN03190 773 IIINSNSKESCR-KSLEDALVMSKKL-TTVSGIS-QNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVV 849 (1178)
T ss_pred EEecCCchhhHH-HHHHHHhhhhhhc-ccccccc-ccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEE
Confidence 666443211000 0000000000000 0000000 0000000112346789999999998874 3345666777655 4
Q ss_pred EEEecCHHHHHHHHHHHHHc-CCEEEEeCCCccchhhhhhCCcceeecCCc---cccccCccccccchhHHHHHH-HHhh
Q psy6090 324 IFARMSSDQKQQLVLELQQL-GYYVAMCGDGANDCGALRAAHAGISLSEAE---SSVASPFTSTVANISCVLRII-REGR 398 (674)
Q Consensus 324 VfaR~sP~qK~~iV~~lq~~-g~~V~m~GDG~ND~~aLk~AdvGIams~ae---asvAAdf~s~~~~i~~V~~~I-~eGR 398 (674)
||||++|.||+++|+.+|+. +.+|+|||||+||++|||+|||||++++.| |..||||+... |..+.++| -+||
T Consensus 850 I~cR~sP~QKa~IV~~vk~~~~~vtlaIGDGaNDv~mIq~AdVGIGIsG~EG~qA~~aSDfaI~~--Fr~L~rLLlvHGr 927 (1178)
T PLN03190 850 LCCRVAPLQKAGIVALVKNRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQ--FRFLVPLLLVHGH 927 (1178)
T ss_pred EEecCCHHHHHHHHHHHHhcCCcEEEEECCCcchHHHHHhcCeeeeecCchhHHHHHhhccchhh--hHHHHHHHHHhCH
Confidence 89999999999999999997 589999999999999999999999999999 45579999876 45566665 5999
Q ss_pred HHHHHHHHHHHHHH----HHHHHHH-HHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHc-cCCCCCCCCcCCCC-----
Q psy6090 399 AALVTSFGIFKFMV----LYSLCEF-FSTMILYTIDSNLTDFEFLYIDIALVVNFAFFFG-RNHAFSGPLTSETP----- 467 (674)
Q Consensus 399 ~~l~ts~~~~k~~~----~~~l~~~-~~~~~l~~~~~~l~~~q~L~idl~~~~~~~~~l~-~~~p~~~~L~~~~P----- 467 (674)
.++.++-.+..|+. .+.+.|| +.....|+..+.+.++-+.++|++++.+|.+++| +++..+.+...+.|
T Consensus 928 ~~y~R~s~~i~y~fYKN~~~~~~qf~f~~~~~fSg~~ly~~~~~~~yN~~fTslPii~~~ifD~dv~~~~l~~~P~LY~~ 1007 (1178)
T PLN03190 928 WNYQRMGYMILYNFYRNAVFVLVLFWYVLFTCFTLTTAINEWSSVLYSVIYTALPTIVVGILDKDLSRRTLLKYPQLYGA 1007 (1178)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhCcHhhhh
Confidence 99977655444432 2333333 3444455566677888899999999999999885 55544333333444
Q ss_pred --CCCccchHHHHHHHHHHHHHHHHHHHHHHHH
Q psy6090 468 --LNSLFSYVTLLSMFFQLILMVSMQIISFIIV 498 (674)
Q Consensus 468 --~~~l~s~~~~~si~~q~~i~~~~~~~~~~~~ 498 (674)
.+..++...++.+++.+++++++.++..+++
T Consensus 1008 ~~~~~~~n~~~F~~w~~~~i~qs~iiff~~~~~ 1040 (1178)
T PLN03190 1008 GQRQEAYNSKLFWLTMIDTLWQSAVVFFVPLFA 1040 (1178)
T ss_pred hccCCccCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5678999999999999999887666544333
No 17
>KOG0203|consensus
Probab=100.00 E-value=1.7e-50 Score=443.17 Aligned_cols=487 Identities=22% Similarity=0.297 Sum_probs=357.3
Q ss_pred cccchHHHHHHHhhcccceecCCc---------ccCCHHHHHHHHHcCcEEeC------C-CCcccCCCCC---ccceEe
Q psy6090 69 NTNEHVKLKHGMATCHSLTLINGE---------LSGDPLDLKMFESTGWTLEE------P-NLKEDCHYEL---PIPAIV 129 (674)
Q Consensus 69 ~~~~~~~~~~~~a~Chsl~~~~~~---------l~Gdpld~~m~~~t~~~l~~------~-~~~~~~~~~~---~~~~v~ 129 (674)
+-++ ..+..+...|+.+....|+ ..||+.|.++++++.-.+.. . ....+.+|++ +.-+++
T Consensus 411 ~~~~-~~l~r~~~lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~~~~~R~~~~kv~eipfNSt~Kyqlsih 489 (1019)
T KOG0203|consen 411 SATF-IALSRIATLCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIELILGSVMELRERNPKVAEIPFNSTNKYQLSIH 489 (1019)
T ss_pred CchH-HHHHHHHHHhCcceecccccCCceeeeeccCCHHHHHHHHHHHHhcchHHHHHHhhHHhhcCCcccccceEEEEE
Confidence 4455 6889999999999988765 78999999999877544332 0 0111234443 223344
Q ss_pred cCCC-CC--------------cc--ccc----------cccchHHHHHHHHHhhcCcEEEEEeeecccccchHHHhhhch
Q psy6090 130 RPPS-GD--------------YQ--SVL----------ISVPENIVSVLSEYTEQGYRVIALASRTLSIDDYKHLNYMKR 182 (674)
Q Consensus 130 ~~~~-~~--------------lq--svi----------~~~p~~~~~~l~~~~~~G~Rvla~A~k~l~~~~~~~~~~~~r 182 (674)
+..+ .. ++ |-+ +...++|.+.+.++...|-||+++|++.++++++.+....+-
T Consensus 490 ~~~d~~~~~~~l~mKGape~il~~CSTi~i~g~e~pld~~~~~~f~~ay~~lg~~GerVlgF~~~~l~~~~~p~~~~f~~ 569 (1019)
T KOG0203|consen 490 ETEDPSDPRFLLVMKGAPERILDRCSTILINGEEKPLDEKLKEAFQEAYLELGGLGERVLGFCDLELPDEKFPRGFQFDT 569 (1019)
T ss_pred ecCCCCCccceeeecCChHHHHhhccceeecCCCCCcCHHHHHHHHHHHHHhhhcchHHHHHHHHhcchhcCCCceEeec
Confidence 4222 11 11 222 334577999999999999999999999999656554443333
Q ss_pred hhh---cccceeeeeehhccCCCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCCCCCCCeEEEEeCCCCCCCCC
Q psy6090 183 EDI---EKDLEFLGLIILENRLKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKECGIIDPGETVVDVSAVPGGLKEC 259 (674)
Q Consensus 183 ~~i---E~dL~flGli~~en~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~gi~~~~~~vi~~~~~~~~~~~~ 259 (674)
++. -.||.|+|++.|-||+|..+++++..+|.||||++|+|||++.||.++|++.||+..+..+.......
T Consensus 570 d~~n~p~~nl~FlGl~s~idPPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~~a~r------ 643 (1019)
T KOG0203|consen 570 DDVNFPTDNLRFLGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVEDIAKR------ 643 (1019)
T ss_pred CCCCCcchhccccchhhccCCCcccCchhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCchhhhhhHHh------
Confidence 332 27899999999999999999999999999999999999999999999999999987655443211000
Q ss_pred CceEEEEcCcchhhhhhhhccCCchhhhhccCCCCeEEEEcchhHHHHHhhCchhHHHHHhhc--cEEEecCHHHHHHHH
Q psy6090 260 PKVYFTVSGVSAIQTKAKKLNYSKTEEELGLSSGAYKFAVTGKSWELIRDQMPELIPRIIVKG--AIFARMSSDQKQQLV 337 (674)
Q Consensus 260 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~itG~~~~~i~~~~~~~~~~i~~~~--~VfaR~sP~qK~~iV 337 (674)
++..... .........++.|.++..+ .++.+++++.+- .||||.||+||..||
T Consensus 644 -------------------~~~~v~~---vn~~~a~a~VihG~eL~~~---~~~qld~il~nh~eIVFARTSPqQKLiIV 698 (1019)
T KOG0203|consen 644 -------------------LNIPVEQ---VNSRDAKAAVIHGSELPDM---SSEQLDELLQNHQEIVFARTSPQQKLIIV 698 (1019)
T ss_pred -------------------cCCcccc---cCccccceEEEeccccccc---CHHHHHHHHHhCCceEEEecCccceEEeE
Confidence 0000000 0001123456677665433 335556655542 599999999999999
Q ss_pred HHHHHcCCEEEEeCCCccchhhhhhCCcceeecCCcccc---ccCccccccchhHHHHHHHHhhHHHHHHHHHHHHHHHH
Q psy6090 338 LELQQLGYYVAMCGDGANDCGALRAAHAGISLSEAESSV---ASPFTSTVANISCVLRIIREGRAALVTSFGIFKFMVLY 414 (674)
Q Consensus 338 ~~lq~~g~~V~m~GDG~ND~~aLk~AdvGIams~aeasv---AAdf~s~~~~i~~V~~~I~eGR~~l~ts~~~~k~~~~~ 414 (674)
+..|++|.+|+..|||.||.+|||.||||||||-+++++ |||+++.++||++|+..++|||-.+. +.|..+.|
T Consensus 699 e~cQr~GaiVaVTGDGVNDsPALKKADIGVAMGiaGSDvsKqAADmILLDDNFASIVtGVEEGRLiFD----NLKKsIAY 774 (1019)
T KOG0203|consen 699 EGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFD----NLKKSIAY 774 (1019)
T ss_pred hhhhhcCcEEEEeCCCcCCChhhcccccceeeccccchHHHhhcceEEecCcchhheeecccceehhh----hHHHHHHH
Confidence 999999999999999999999999999999999998887 79999999999999999999999865 55666666
Q ss_pred HHHHH------HHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHccCCCCCCCCcCCCCCC----CccchHHHHHHHHH-
Q psy6090 415 SLCEF------FSTMILYTIDSNLTDFEFLYIDIALVVNFAFFFGRNHAFSGPLTSETPLN----SLFSYVTLLSMFFQ- 483 (674)
Q Consensus 415 ~l~~~------~~~~~l~~~~~~l~~~q~L~idl~~~~~~~~~l~~~~p~~~~L~~~~P~~----~l~s~~~~~si~~q- 483 (674)
++... +...++++.+.+++.+++|.||+..+++||+++++++|+. .+|+++|+. +|++.+.+..-++|
T Consensus 775 TLTsNipEI~PfL~fi~~giPLplgtitIL~IDLgTDmvPAiSLAYE~aEs-DIM~r~PR~p~~D~LVN~rLi~~aY~qI 853 (1019)
T KOG0203|consen 775 TLTSNIPEITPFLLFILFGIPLPLGTVTILCIDLGTDIVPAISLAYEKAES-DIMLRPPRNPKDDKLVNKRLISYSYLQI 853 (1019)
T ss_pred HHHhcchhHhHHHHHHHhCCCcccchhhhhhhHhhcccchhhhHhccCchh-hHHhcCCCCCcccccccchhHHHHHHHH
Confidence 66533 2334567789999999999999999999999999999999 899999954 78888877655555
Q ss_pred HHHHHHHHHHHHHHHhhccccccccc-------------C--CC-CccC--------cchhhHHHH--HHHHHHHHHHHH
Q psy6090 484 LILMVSMQIISFIIVHKFAWFEPFVY-------------T--NA-ISYS--------CYENYAVFS--ISMFQYIILAIT 537 (674)
Q Consensus 484 ~~i~~~~~~~~~~~~~~~~w~~~~~~-------------~--~~-~~~~--------~~~~t~~f~--~~~~q~~~~~~v 537 (674)
+.++++..++.||....+..|.|..- + |. ...- .+...+.|+ +...|+..+...
T Consensus 854 G~iqa~agF~tYFvima~nGf~P~~L~~ir~~W~d~~~~Dl~DsyGQeWtyeqRk~le~tc~taFfvsIvV~Q~adLii~ 933 (1019)
T KOG0203|consen 854 GMIQALAGFFTYFVIMAENGFLPRTLVGLREDWDDDGVNDLTDSYGQEWTYEQRKYLEYTCYTAFFISIVVVQWADLIIC 933 (1019)
T ss_pred HHHHHHHHHHHHHHHHHHcCCChHHHHhhHHhhhhhhhhhhhhhccccccHHHHHHHHHhhhhheeeeehHHhHhhHHhh
Confidence 55678888899998887766555321 0 00 0011 122233443 556788888888
Q ss_pred hcCCC-CcccccccchhHHHHHHHHHHHHHHhhcccchhhhhcceecCCCCCcHHHHHHH
Q psy6090 538 FSQGK-PYRTPIYKNKLFILSIIIMTWVCIYITLIPSEFIIQFLQLRFPPNMQFPLIVIY 596 (674)
Q Consensus 538 ~s~g~-pfr~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~p~~~~~~~l~~ 596 (674)
-+++. .|.+. .+|+.++++++..+++..++.+. |.....+++.+++ +.|+++-+.
T Consensus 934 KTRRnSlfqqG-mrN~vl~f~v~~e~~La~fl~y~--pg~~~~l~~~pl~-~~~wl~a~P 989 (1019)
T KOG0203|consen 934 KTRRNSIFQQG-MRNKVLIFAVIFETCLACFLCYC--PGVLYALGMYPLK-FQWWLVAFP 989 (1019)
T ss_pred hcchhHHHHhh-hhhhhHHHHHHHHHHHHHHHhcC--ccHHHHhccCCCC-cEEEEeccc
Confidence 77654 45555 79999999999999888888876 5588889999998 666655443
No 18
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=100.00 E-value=3.3e-45 Score=427.84 Aligned_cols=457 Identities=18% Similarity=0.217 Sum_probs=318.7
Q ss_pred CCCcccccccccccCCCCCCccccCCC--CCcCCceEEEEEEcCCCCcCccccccccccchHHHHHHHhhcccceecCCc
Q psy6090 15 KEDCHYELPIPAIVRPPSDSQAYENHE--DSRKTRHYASVVPLQGKKLGAPIKHIQNTNEHVKLKHGMATCHSLTLINGE 92 (674)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~te~gld~~g~~~~~~~~f~~~~~~~~~~~~~~~~~~~~a~Chsl~~~~~~ 92 (674)
...+.+-...+.++.+..-....-+++ +|+..+.+.++.+..++ + .. +.++...++|.. +
T Consensus 268 ak~gilvk~l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~-~----------~~-~~~l~~a~~~~~------~ 329 (755)
T TIGR01647 268 AKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEILPFFNG-F----------DK-DDVLLYAALASR------E 329 (755)
T ss_pred HhCCeEEcccHHHHhccCCcEEEecCCCccccCceEEEEEEecCCC-C----------CH-HHHHHHHHHhCC------C
Confidence 344555556667777777666666654 89999999998765432 1 11 334444444431 3
Q ss_pred ccCCHHHHHHHHHcCc-E--EeCCCCcccCCCC---CccceEecCCC-CC-c---c---ccc-------cccchHHHHHH
Q psy6090 93 LSGDPLDLKMFESTGW-T--LEEPNLKEDCHYE---LPIPAIVRPPS-GD-Y---Q---SVL-------ISVPENIVSVL 151 (674)
Q Consensus 93 l~Gdpld~~m~~~t~~-~--l~~~~~~~~~~~~---~~~~~v~~~~~-~~-l---q---svi-------~~~p~~~~~~l 151 (674)
-.|||+|.++++...- . .+.....+..+|+ +.|.++++..+ +. + + ..+ ++.++++.+.+
T Consensus 330 ~~~~pi~~Ai~~~~~~~~~~~~~~~~~~~~pf~~~~k~~~~~v~~~~~g~~~~~~kGa~e~il~~c~~~~~~~~~~~~~~ 409 (755)
T TIGR01647 330 EDQDAIDTAVLGSAKDLKEARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILDLCDNKKEIEEKVEEKV 409 (755)
T ss_pred CCCChHHHHHHHHHHHhHHHHhcCceEEEeccCCCCCeEEEEEEeCCCceEEEEEeCChHHHHHhcCCcHHHHHHHHHHH
Confidence 3589999999875421 1 0001111223454 35666665321 21 0 1 111 23567888999
Q ss_pred HHHhhcCcEEEEEeeecccccchHHHhhhchhhhcccceeeeeehhccCCCcchHHHHHHHHhcCCeEEEEcCCCHhhHH
Q psy6090 152 SEYTEQGYRVIALASRTLSIDDYKHLNYMKREDIEKDLEFLGLIILENRLKPQTEGVIKELKDARVKVVMITGDNIQTAI 231 (674)
Q Consensus 152 ~~~~~~G~Rvla~A~k~l~~~~~~~~~~~~r~~iE~dL~flGli~~en~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~ 231 (674)
++++++|+||+++|||. .|++|+|+|+++|+||+||+++++|++||++||+++|+||||+.||.
T Consensus 410 ~~~~~~G~rvl~vA~~~----------------~e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~ 473 (755)
T TIGR01647 410 DELASRGYRALGVARTD----------------EEGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAK 473 (755)
T ss_pred HHHHhCCCEEEEEEEEc----------------CCCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEEECCCCHHHHH
Confidence 99999999999999982 26789999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCCCCeEEEEeCCCCCCCCCCceEEEEcCcchhhhhhhhccCCchhhhhccCCCCeEEEEcchhHHHHHhhC
Q psy6090 232 SVAKECGIIDPGETVVDVSAVPGGLKECPKVYFTVSGVSAIQTKAKKLNYSKTEEELGLSSGAYKFAVTGKSWELIRDQM 311 (674)
Q Consensus 232 ~vA~~~gi~~~~~~vi~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~itG~~~~~i~~~~ 311 (674)
++|+++||.++ ++..+. ..+|+..+.+ .
T Consensus 474 ~IA~~lGI~~~---~~~~~~----------------------------------------------l~~~~~~~~~---~ 501 (755)
T TIGR01647 474 ETARRLGLGTN---IYTADV----------------------------------------------LLKGDNRDDL---P 501 (755)
T ss_pred HHHHHcCCCCC---CcCHHH----------------------------------------------hcCCcchhhC---C
Confidence 99999999532 110000 0011111111 1
Q ss_pred chhHHHHHhhccEEEecCHHHHHHHHHHHHHcCCEEEEeCCCccchhhhhhCCcceeecCCcccc---ccCccccccchh
Q psy6090 312 PELIPRIIVKGAIFARMSSDQKQQLVLELQQLGYYVAMCGDGANDCGALRAAHAGISLSEAESSV---ASPFTSTVANIS 388 (674)
Q Consensus 312 ~~~~~~i~~~~~VfaR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~aLk~AdvGIams~aeasv---AAdf~s~~~~i~ 388 (674)
.+.+.+++.++.+|||++|+||.++|+.+|+.|++|+|+|||.||++|||+|||||||++ .+++ |||+++.+++++
T Consensus 502 ~~~~~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~~VamvGDGvNDapAL~~AdVGIAm~~-gtdvAkeaADivLl~d~l~ 580 (755)
T TIGR01647 502 SGELGEMVEDADGFAEVFPEHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAVAG-ATDAARSAADIVLTEPGLS 580 (755)
T ss_pred HHHHHHHHHhCCEEEecCHHHHHHHHHHHHhcCCEEEEEcCCcccHHHHHhCCeeEEecC-CcHHHHHhCCEEEEcCChH
Confidence 234666777889999999999999999999999999999999999999999999999985 4555 699999999999
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhcCCCchhHHHHHHHHHHHHHHHHHccCCCCCCCCcCCCC
Q psy6090 389 CVLRIIREGRAALVTSFGIFKFMVLYSLCEFFSTMILY-TIDSNLTDFEFLYIDIALVVNFAFFFGRNHAFSGPLTSETP 467 (674)
Q Consensus 389 ~V~~~I~eGR~~l~ts~~~~k~~~~~~l~~~~~~~~l~-~~~~~l~~~q~L~idl~~~~~~~~~l~~~~p~~~~L~~~~P 467 (674)
.|++++++||.++.+..+.++|....++...+.+.+.. ..+.+++++|+||++++.+. ++++++++++.+ +++|
T Consensus 581 ~I~~ai~~gR~~~~ni~k~i~~~~~~n~~~~~~~~~~~l~~~~~l~~~~il~~~l~~d~-~~~~l~~~~~~~----~~~p 655 (755)
T TIGR01647 581 VIVDAILESRKIFQRMKSYVIYRIAETIRIVFFFGLLILILNFYFPPIMVVIIAILNDG-TIMTIAYDNVKP----SKLP 655 (755)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCcchhHHHHHHHHHHHhH-hHhhccCCCCCC----CCCC
Confidence 99999999999999888888887776665544333211 23445999999999999997 499999998876 3666
Q ss_pred CCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccCCCCccCcchhhHHHH-HHHHHHHHHHHHhcCCCCccc
Q psy6090 468 LNSLFSYVTLLSMFFQLILMVSMQIISFIIVHKFAWFEPFVYTNAISYSCYENYAVFS-ISMFQYIILAITFSQGKPYRT 546 (674)
Q Consensus 468 ~~~l~s~~~~~si~~q~~i~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~t~~f~-~~~~q~~~~~~v~s~g~pfr~ 546 (674)
....+. ..+..++..+.+..+..+..|++.....|+..... .........|+.|. +...|.++++.+++++.||+.
T Consensus 656 ~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~t~~f~~~~~~~~~~~~~~r~~~~~~~~ 732 (755)
T TIGR01647 656 QRWNLR-EVFTMSTVLGIYLVISTFLLLAIALDTSFFIDKFG--LQLLHGNLQSLIYLQVSISGQATIFVTRTHGFFWSE 732 (755)
T ss_pred CccchH-HHHHHHHHHHHHHHHHHHHHHHHHHhcccchhccc--ccccHhhhHHHHHHHHHHHHHHHHheeccCCCCccc
Confidence 665554 55555566666666666656555443222111100 00011234677885 556899999999999998854
Q ss_pred ccccchhHHHHHHHHHHHHHHh
Q psy6090 547 PIYKNKLFILSIIIMTWVCIYI 568 (674)
Q Consensus 547 ~~~~N~~~~~~~~~~~~~~~~~ 568 (674)
..+++++++.++..++.+++
T Consensus 733 --~p~~~l~~~~~~~~~~~~~~ 752 (755)
T TIGR01647 733 --RPGKLLFIAFVIAQIIATFI 752 (755)
T ss_pred --CCcHHHHHHHHHHHHHHHHH
Confidence 35666666666655554443
No 19
>KOG0210|consensus
Probab=100.00 E-value=1.8e-45 Score=394.33 Aligned_cols=484 Identities=21% Similarity=0.336 Sum_probs=339.3
Q ss_pred HHHHHHHhhcccceec---CCcc---cCCHHHHHHHHHc---CcEEeCCCCc-----------------ccCCCC---Cc
Q psy6090 74 VKLKHGMATCHSLTLI---NGEL---SGDPLDLKMFEST---GWTLEEPNLK-----------------EDCHYE---LP 124 (674)
Q Consensus 74 ~~~~~~~a~Chsl~~~---~~~l---~Gdpld~~m~~~t---~~~l~~~~~~-----------------~~~~~~---~~ 124 (674)
....+++|+||+++.+ ||++ ...|-|+++.+.| |-.+-..+.. ...+|. ++
T Consensus 474 ~~~V~alalCHNVTPv~e~~ge~sYQAaSPDEVAiVkwTe~VGl~L~~Rd~~~itL~~~~~~~~~yqIL~vFPFtsEtKR 553 (1051)
T KOG0210|consen 474 RNAVLALALCHNVTPVFEDDGEVSYQAASPDEVAIVKWTETVGLKLAKRDRHAITLRVPLDDELNYQILQVFPFTSETKR 553 (1051)
T ss_pred HHHHHHHHHhccCCcccCCCceEEeecCCCCeEEEEEeeeecceEEeecccceEEEecCCCcceeEEEEEEeccccccce
Confidence 4688999999999976 3443 4578888887654 4444322110 012343 47
Q ss_pred cceEecCCC-CC----cc---cccc---ccchHHHHHHHHHhhcCcEEEEEeeecccccchHHHhhh---------ch--
Q psy6090 125 IPAIVRPPS-GD----YQ---SVLI---SVPENIVSVLSEYTEQGYRVIALASRTLSIDDYKHLNYM---------KR-- 182 (674)
Q Consensus 125 ~~~v~~~~~-~~----lq---svi~---~~p~~~~~~l~~~~~~G~Rvla~A~k~l~~~~~~~~~~~---------~r-- 182 (674)
|-.|||... +. ++ .|.. ..-+..++...+||++|+|+|.+|.|.|++++|+.++.. +|
T Consensus 554 MGIIVr~e~~~evtfylKGAD~VMs~iVq~NdWleEE~gNMAREGLRtLVvakK~Ls~~eye~Fe~~y~~A~lSi~dR~~ 633 (1051)
T KOG0210|consen 554 MGIIVRDETTEEVTFYLKGADVVMSGIVQYNDWLEEECGNMAREGLRTLVVAKKVLSEEEYEAFEEAYNAAKLSISDRDQ 633 (1051)
T ss_pred eeEEEecCCCceEEEEEecchHHHhcccccchhhhhhhhhhhhhcceEEEEEecccCHHHHHHHHHHHHhhhCccchHHH
Confidence 778888442 22 22 2222 223457788999999999999999999997776655432 22
Q ss_pred -------hhhcccceeeeeehhccCCCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCCCCCCCeEEEEeCCCCC
Q psy6090 183 -------EDIEKDLEFLGLIILENRLKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKECGIIDPGETVVDVSAVPGG 255 (674)
Q Consensus 183 -------~~iE~dL~flGli~~en~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~gi~~~~~~vi~~~~~~~~ 255 (674)
..+|+||.+||+.+.||+|+++++.+++.||+|||++||+|||+.+||+.+|+..+++..++.+..+......
T Consensus 634 ~ma~vv~~~LE~dlelL~LTGVEDkLQ~dVk~tLElLRNAgikiWMLTGDKlETA~ciAkSs~L~sR~q~ihv~~~v~sr 713 (1051)
T KOG0210|consen 634 KMANVVERYLERDLELLGLTGVEDKLQDDVKPTLELLRNAGIKIWMLTGDKLETAICIAKSSRLFSRGQYIHVIRSVTSR 713 (1051)
T ss_pred HHHHHHHHHHHhhhHHhcccChHHHHhhhhHhHHHHHhhcCcEEEEEcCcchhheeeeehhccceecCceEEEEEecCCc
Confidence 2689999999999999999999999999999999999999999999999999999999998887766543322
Q ss_pred CCCCCceEEEEcCcchhhhhhhhccCCchhhhhccCCCCeEEEEcchhHHHHHhhCchhHHHHHhh--ccEEEecCHHHH
Q psy6090 256 LKECPKVYFTVSGVSAIQTKAKKLNYSKTEEELGLSSGAYKFAVTGKSWELIRDQMPELIPRIIVK--GAIFARMSSDQK 333 (674)
Q Consensus 256 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~itG~~~~~i~~~~~~~~~~i~~~--~~VfaR~sP~qK 333 (674)
.+. . .+.+.-....+.+++|+|++++.+.+++.+++.++.+. ++|+||++|.||
T Consensus 714 ~da-----------------h-------~eL~~lR~k~~~aLvi~G~Sl~~cl~yye~Ef~el~~~~~aVv~CRctPtQK 769 (1051)
T KOG0210|consen 714 GDA-----------------H-------NELNNLRRKTDCALVIDGESLEFCLKYYEDEFIELVCELPAVVCCRCTPTQK 769 (1051)
T ss_pred hHH-----------------H-------HHHHHhhcCCCcEEEEcCchHHHHHHHHHHHHHHHHHhcCcEEEEecChhHH
Confidence 110 0 00111123456789999999999999998888887765 579999999999
Q ss_pred HHHHHHHHHc-CCEEEEeCCCccchhhhhhCCcceeecCCc---cccccCccccccchhHHHHHH-HHhhHHHHHHHHHH
Q psy6090 334 QQLVLELQQL-GYYVAMCGDGANDCGALRAAHAGISLSEAE---SSVASPFTSTVANISCVLRII-REGRAALVTSFGIF 408 (674)
Q Consensus 334 ~~iV~~lq~~-g~~V~m~GDG~ND~~aLk~AdvGIams~ae---asvAAdf~s~~~~i~~V~~~I-~eGR~~l~ts~~~~ 408 (674)
+++++.+|++ |..|+++|||.||++|+++||+||++-+.| ||+||||.... ++.|.+++ -+||.++..+-..-
T Consensus 770 A~v~~llq~~t~krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQASLAADfSItq--F~Hv~rLLl~HGR~SYkrsa~la 847 (1051)
T KOG0210|consen 770 AQVVRLLQKKTGKRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQASLAADFSITQ--FSHVSRLLLWHGRNSYKRSAKLA 847 (1051)
T ss_pred HHHHHHHHHhhCceEEEEcCCCccchheeecccceeeecccccccchhccccHHH--HHHHHHHhhccccchHHHHHHHH
Confidence 9999999986 899999999999999999999999998877 67789998764 66777765 59999999887777
Q ss_pred HHHH----HHHHHHHHHHHHHHhhcCCC-chhHHHHHHHHHHHHHHHHHccCCCCCCCCcCCCC-------CCCccchHH
Q psy6090 409 KFMV----LYSLCEFFSTMILYTIDSNL-TDFEFLYIDIALVVNFAFFFGRNHAFSGPLTSETP-------LNSLFSYVT 476 (674)
Q Consensus 409 k~~~----~~~l~~~~~~~~l~~~~~~l-~~~q~L~idl~~~~~~~~~l~~~~p~~~~L~~~~P-------~~~l~s~~~ 476 (674)
+|.. ..+..|++...+.|..+..+ -.+-+.-+.-.++.+|.+.+..++....++....| .++.+|.+.
T Consensus 848 qfViHRGL~Is~~Qavfs~v~yF~~V~LyqG~LmvgysT~YTmlPVFSlv~d~Dv~~~~a~~yPELYKeL~kgr~lSYKt 927 (1051)
T KOG0210|consen 848 QFVIHRGLIISTMQAVFSSVFYFAPVALYQGFLMVGYSTCYTMLPVFSLVLDRDVSESLAVLYPELYKELTKGRSLSYKT 927 (1051)
T ss_pred HHHHhhhHHHHHHHHHHHHHhhhcchHHhhhhHHHHHHHHHHHhhhheeeecccccHHHHhhhHHHHHHHhcCCccchhh
Confidence 7764 34555665555555544332 22223333445677777777766655445555556 678999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcccccccccCCCCccCcchhhHHH-HHHHHHHHHHHHHhcCCCCcccccccchhHH
Q psy6090 477 LLSMFFQLILMVSMQIISFIIVHKFAWFEPFVYTNAISYSCYENYAVF-SISMFQYIILAITFSQGKPYRTPIYKNKLFI 555 (674)
Q Consensus 477 ~~si~~q~~i~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~t~~f-~~~~~q~~~~~~v~s~g~pfr~~~~~N~~~~ 555 (674)
++.+++..++++......++++..+.... ..+..| .+.....+.+++-.+.. ++.++
T Consensus 928 F~iwvLISiYQG~vim~g~~~l~~~ef~~-------------ivaisFtaLi~tELiMVaLtv~tw---------~~~m~ 985 (1051)
T KOG0210|consen 928 FFIWVLISIYQGSVIMYGALLLFDTEFIH-------------IVAISFTALILTELIMVALTVRTW---------HWLMV 985 (1051)
T ss_pred hhhhhhHHHHcccHHHHHHHHHhhhhheE-------------eeeeeeHHHHHHHHHHHhhhhhhh---------hHHHH
Confidence 99999888888766655555444332211 112223 23334554444433221 33333
Q ss_pred HHHHHHHHHHHHhhcccchhhhhcceecCCCCCcHHHHHHHHHHHHHHHHHHHH
Q psy6090 556 LSIIIMTWVCIYITLIPSEFIIQFLQLRFPPNMQFPLIVIYLAICNFVLSLFIE 609 (674)
Q Consensus 556 ~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~p~~~~~~~l~~~~~~~~~~~~~~e 609 (674)
++-++ .+.+.....+++..+|....++.+.|.+.+.++.+++++..|+.+
T Consensus 986 vae~l----sL~~Yivsl~~l~~yfd~~f~~~~~Fl~k~t~I~~vS~Lpl~~~K 1035 (1051)
T KOG0210|consen 986 VAELL----SLALYIVSLAFLHEYFDRYFILTYVFLWKVTVITLVSCLPLYFIK 1035 (1051)
T ss_pred HHHHH----HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333 333333345677888887777667777777778888887776666
No 20
>KOG0206|consensus
Probab=100.00 E-value=3.6e-44 Score=417.42 Aligned_cols=412 Identities=21% Similarity=0.337 Sum_probs=288.3
Q ss_pred HHHHHHHhhcccceecC-Cc-----c-cCCHHHHHHHHHc---CcEEeCCCC----------------cccCCCC---Cc
Q psy6090 74 VKLKHGMATCHSLTLIN-GE-----L-SGDPLDLKMFEST---GWTLEEPNL----------------KEDCHYE---LP 124 (674)
Q Consensus 74 ~~~~~~~a~Chsl~~~~-~~-----l-~Gdpld~~m~~~t---~~~l~~~~~----------------~~~~~~~---~~ 124 (674)
..++.++|+||++.... .+ + .-.|.|.++.++. |..+-.... -+.-.|+ ++
T Consensus 464 ~~f~~~la~chtv~~e~~~~~~~~~Y~A~SPDE~AlV~aAr~~gf~f~~Rt~~~vti~~~g~~~~y~lL~iLeF~S~RKR 543 (1151)
T KOG0206|consen 464 LEFFRALALCHTVIPEKDEDSGKLSYEAESPDEAALVEAARELGFVFLGRTPDSVTIRELGVEETYELLNVLEFNSTRKR 543 (1151)
T ss_pred HHHhhHHhccceeeeccCCCccceeeecCCCcHHHHHHHHHhcCceeeeccCceEEEeccccceeEEEEEEeccccccce
Confidence 57999999999998764 21 2 3468888876654 544322110 0112354 48
Q ss_pred cceEecCCCCCc----c---ccc--------cccchHHHHHHHHHhhcCcEEEEEeeecccccchHHHhhh---------
Q psy6090 125 IPAIVRPPSGDY----Q---SVL--------ISVPENIVSVLSEYTEQGYRVIALASRTLSIDDYKHLNYM--------- 180 (674)
Q Consensus 125 ~~~v~~~~~~~l----q---svi--------~~~p~~~~~~l~~~~~~G~Rvla~A~k~l~~~~~~~~~~~--------- 180 (674)
|++|||.+++.+ + ||| +...+.-.+.++.||.+|+|+|++|||++++++|.++.+.
T Consensus 544 MSVIVR~p~g~i~LycKGADsvI~erL~~~~~~~~e~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~ 623 (1151)
T KOG0206|consen 544 MSVIVRDPDGRILLYCKGADSVIFERLSKNGEKLREKTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLT 623 (1151)
T ss_pred eEEEEEcCCCcEEEEEcCcchhhHhhhhhcchHHHHHHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhcc
Confidence 999999766541 1 666 3345666789999999999999999999998777665432
Q ss_pred ch--------hhhcccceeeeeehhccCCCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCCCCCCCeEEEEeCC
Q psy6090 181 KR--------EDIEKDLEFLGLIILENRLKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKECGIIDPGETVVDVSAV 252 (674)
Q Consensus 181 ~r--------~~iE~dL~flGli~~en~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~gi~~~~~~vi~~~~~ 252 (674)
+| |.+|+||++||.+++||+|+++++++|+.|++||||+||+|||+.+||++||..|+++.++..++.++..
T Consensus 624 ~Re~~L~e~ae~iEk~L~LLGATAIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~ 703 (1151)
T KOG0206|consen 624 DREELLDEVAEEIEKDLILLGATAIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTE 703 (1151)
T ss_pred CHHHHHHHHHHHHHhcchhhcceeeechhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecC
Confidence 23 4799999999999999999999999999999999999999999999999999999999999998888765
Q ss_pred CCCCCCCCceEEEEcCcch-hhhh-hhhccCCchhhhhccCCCCeEEEEcchhHHHHHhhCch-hHHHH--HhhccEEEe
Q psy6090 253 PGGLKECPKVYFTVSGVSA-IQTK-AKKLNYSKTEEELGLSSGAYKFAVTGKSWELIRDQMPE-LIPRI--IVKGAIFAR 327 (674)
Q Consensus 253 ~~~~~~~~~i~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~l~itG~~~~~i~~~~~~-~~~~i--~~~~~VfaR 327 (674)
..+... ..+... .... ....+............+.++++++|+++....+...+ .+..+ -|+.++|||
T Consensus 704 ~~~~~~-------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR 776 (1151)
T KOG0206|consen 704 TSEELS-------SLDATAALKETLLRKFTEELEEAKLEHSEKPFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCR 776 (1151)
T ss_pred Chhhhc-------chhhHHHHHHHHHHhhhHHHHHHhhccCcCCceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEcc
Confidence 432110 000000 0000 00000000000000111368999999999887764222 23333 367789999
Q ss_pred cCHHHHHHHHHHHHH-cCCEEEEeCCCccchhhhhhCCcceeecCCcccc---ccCccccccchhHHHHHHHHhhHHHHH
Q psy6090 328 MSSDQKQQLVLELQQ-LGYYVAMCGDGANDCGALRAAHAGISLSEAESSV---ASPFTSTVANISCVLRIIREGRAALVT 403 (674)
Q Consensus 328 ~sP~qK~~iV~~lq~-~g~~V~m~GDG~ND~~aLk~AdvGIams~aeasv---AAdf~s~~~~i~~V~~~I~eGR~~l~t 403 (674)
+||.||+.+|+..++ .+..|+++|||+||++|++.|||||++++.|.-. +|||......+-.- .++-+||..+.+
T Consensus 777 ~sPlQKA~Vv~lVk~~~~~~TLAIGDGANDVsMIQ~AhVGVGIsG~EGmQAvmsSD~AIaqFrfL~r-LLLVHGhW~Y~R 855 (1151)
T KOG0206|consen 777 VSPLQKALVVKLVKKGLKAVTLAIGDGANDVSMIQEAHVGVGISGQEGMQAVMSSDFAIAQFRFLER-LLLVHGHWSYIR 855 (1151)
T ss_pred CCHHHHHHHHHHHHhcCCceEEEeeCCCccchheeeCCcCeeeccchhhhhhhcccchHHHHHHHhh-hheeecceeHHH
Confidence 999999999999975 4899999999999999999999999999998655 58888765544321 234589988876
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH------hhcCCCchhHHHHHHHHHHHHHHHHHc-cCCCCCCCCcCCCC-------CC
Q psy6090 404 SFGIFKFMVLYSLCEFFSTMILY------TIDSNLTDFEFLYIDIALVVNFAFFFG-RNHAFSGPLTSETP-------LN 469 (674)
Q Consensus 404 s~~~~k~~~~~~l~~~~~~~~l~------~~~~~l~~~q~L~idl~~~~~~~~~l~-~~~p~~~~L~~~~P-------~~ 469 (674)
.-++..|. +|-=+.|+...+.| +....+.++++.++|++++.+|.+++| +++..+.....+.| ..
T Consensus 856 ~a~~ilyf-FYKNi~f~~~~fwy~f~~gfSgq~~yd~~~l~lyNv~FTSlPvi~lGvfdqDvsa~~~l~~P~LY~~g~~~ 934 (1151)
T KOG0206|consen 856 LAKMILYF-FYKNIAFTFTLFWYQFFNGFSGQTLYDDWYLSLYNVLFTSLPVIVLGVFDQDVSAETLLRFPELYQRGQLN 934 (1151)
T ss_pred HHHHHHHH-HHHHHHHHHHHHHhhhcCCCCCCccccceEEEEEeEEeecCchhheeecccCCCHHHHhhCCcchhhhhhc
Confidence 54444332 23333344444444 344566778888999999999999887 34333323444444 55
Q ss_pred CccchHHHHHHHHHHHHHHHHHHHH
Q psy6090 470 SLFSYVTLLSMFFQLILMVSMQIIS 494 (674)
Q Consensus 470 ~l~s~~~~~si~~q~~i~~~~~~~~ 494 (674)
.+++++.++..++.++++.+..++.
T Consensus 935 ~~f~~~~f~~~~~~g~~~sli~Ff~ 959 (1151)
T KOG0206|consen 935 LLFNWKRFWGWMLDGFYQSLVIFFL 959 (1151)
T ss_pred cccchHHHHHHHHHHHHhheeeeee
Confidence 7899999999988888887666543
No 21
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=99.97 E-value=6.1e-31 Score=299.26 Aligned_cols=178 Identities=26% Similarity=0.437 Sum_probs=160.8
Q ss_pred ccchHHHHHHHHHhhcCcEEEEEeeecccccchHHHhhhchhhhcccceeeeeehhccCCCcchHHHHHHHHhcCCeEEE
Q psy6090 142 SVPENIVSVLSEYTEQGYRVIALASRTLSIDDYKHLNYMKREDIEKDLEFLGLIILENRLKPQTEGVIKELKDARVKVVM 221 (674)
Q Consensus 142 ~~p~~~~~~l~~~~~~G~Rvla~A~k~l~~~~~~~~~~~~r~~iE~dL~flGli~~en~lk~~t~~~I~~L~~agIrvvm 221 (674)
.+|.++++..+.++++|+|+++++ .|++|+|+++++|++|||++++|++||++||+++|
T Consensus 404 ~~~~~~~~~~~~~a~~G~~~l~v~---------------------~~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvM 462 (673)
T PRK14010 404 HIPVDLDALVKGVSKKGGTPLVVL---------------------EDNEILGVIYLKDVIKDGLVERFRELREMGIETVM 462 (673)
T ss_pred CCchHHHHHHHHHHhCCCeEEEEE---------------------ECCEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEE
Confidence 357778888899999999999864 15689999999999999999999999999999999
Q ss_pred EcCCCHhhHHHHHHHcCCCCCCCeEEEEeCCCCCCCCCCceEEEEcCcchhhhhhhhccCCchhhhhccCCCCeEEEEcc
Q psy6090 222 ITGDNIQTAISVAKECGIIDPGETVVDVSAVPGGLKECPKVYFTVSGVSAIQTKAKKLNYSKTEEELGLSSGAYKFAVTG 301 (674)
Q Consensus 222 iTGDn~~TA~~vA~~~gi~~~~~~vi~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~itG 301 (674)
+||||..||..+|+++|+.
T Consensus 463 iTGDn~~TA~aIA~elGI~------------------------------------------------------------- 481 (673)
T PRK14010 463 CTGDNELTAATIAKEAGVD------------------------------------------------------------- 481 (673)
T ss_pred ECCCCHHHHHHHHHHcCCc-------------------------------------------------------------
Confidence 9999999999999999993
Q ss_pred hhHHHHHhhCchhHHHHHhhccEEEecCHHHHHHHHHHHHHcCCEEEEeCCCccchhhhhhCCcceeecCCcccc---cc
Q psy6090 302 KSWELIRDQMPELIPRIIVKGAIFARMSSDQKQQLVLELQQLGYYVAMCGDGANDCGALRAAHAGISLSEAESSV---AS 378 (674)
Q Consensus 302 ~~~~~i~~~~~~~~~~i~~~~~VfaR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~aLk~AdvGIams~aeasv---AA 378 (674)
.+|||++|+||.++|+.+|+.|+.|+|+|||.||++||++|||||||+ +++++ ||
T Consensus 482 ---------------------~v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMg-sGTdvAkeAA 539 (673)
T PRK14010 482 ---------------------RFVAECKPEDKINVIREEQAKGHIVAMTGDGTNDAPALAEANVGLAMN-SGTMSAKEAA 539 (673)
T ss_pred ---------------------eEEcCCCHHHHHHHHHHHHhCCCEEEEECCChhhHHHHHhCCEEEEeC-CCCHHHHHhC
Confidence 279999999999999999999999999999999999999999999999 45666 69
Q ss_pred CccccccchhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy6090 379 PFTSTVANISCVLRIIREGRAALVTSFGIFKFMVLYSLCEFFSTM 423 (674)
Q Consensus 379 df~s~~~~i~~V~~~I~eGR~~l~ts~~~~k~~~~~~l~~~~~~~ 423 (674)
|++..++|++.|++++++||.++.|......|.....+..++..+
T Consensus 540 DiVLldd~ls~Iv~av~~gR~i~~n~~~~~~f~~~~~~~~~~~i~ 584 (673)
T PRK14010 540 NLIDLDSNPTKLMEVVLIGKQLLMTRGSLTTFSIANDIAKYFAIL 584 (673)
T ss_pred CEEEcCCCHHHHHHHHHHHHHHHHHHHHHHheeeeccHHHHHHHH
Confidence 999999999999999999999999887777777766666655443
No 22
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=99.97 E-value=2.1e-30 Score=295.16 Aligned_cols=165 Identities=30% Similarity=0.461 Sum_probs=151.1
Q ss_pred ccchHHHHHHHHHhhcCcEEEEEeeecccccchHHHhhhchhhhcccceeeeeehhccCCCcchHHHHHHHHhcCCeEEE
Q psy6090 142 SVPENIVSVLSEYTEQGYRVIALASRTLSIDDYKHLNYMKREDIEKDLEFLGLIILENRLKPQTEGVIKELKDARVKVVM 221 (674)
Q Consensus 142 ~~p~~~~~~l~~~~~~G~Rvla~A~k~l~~~~~~~~~~~~r~~iE~dL~flGli~~en~lk~~t~~~I~~L~~agIrvvm 221 (674)
.+|+++++..+.++++|+|++++|+ |++|+|+++++|++|||++++|++||++||+++|
T Consensus 408 ~~~~~~~~~~~~~a~~G~~~l~va~---------------------~~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvM 466 (679)
T PRK01122 408 HFPAELDAAVDEVARKGGTPLVVAE---------------------DNRVLGVIYLKDIVKPGIKERFAELRKMGIKTVM 466 (679)
T ss_pred cChHHHHHHHHHHHhCCCcEEEEEE---------------------CCeEEEEEEEeccCchhHHHHHHHHHHCCCeEEE
Confidence 3578889999999999999999994 5689999999999999999999999999999999
Q ss_pred EcCCCHhhHHHHHHHcCCCCCCCeEEEEeCCCCCCCCCCceEEEEcCcchhhhhhhhccCCchhhhhccCCCCeEEEEcc
Q psy6090 222 ITGDNIQTAISVAKECGIIDPGETVVDVSAVPGGLKECPKVYFTVSGVSAIQTKAKKLNYSKTEEELGLSSGAYKFAVTG 301 (674)
Q Consensus 222 iTGDn~~TA~~vA~~~gi~~~~~~vi~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~itG 301 (674)
+||||+.||..+|+++|+.
T Consensus 467 iTGDn~~TA~aIA~elGId------------------------------------------------------------- 485 (679)
T PRK01122 467 ITGDNPLTAAAIAAEAGVD------------------------------------------------------------- 485 (679)
T ss_pred ECCCCHHHHHHHHHHcCCc-------------------------------------------------------------
Confidence 9999999999999999992
Q ss_pred hhHHHHHhhCchhHHHHHhhccEEEecCHHHHHHHHHHHHHcCCEEEEeCCCccchhhhhhCCcceeecCCcccc---cc
Q psy6090 302 KSWELIRDQMPELIPRIIVKGAIFARMSSDQKQQLVLELQQLGYYVAMCGDGANDCGALRAAHAGISLSEAESSV---AS 378 (674)
Q Consensus 302 ~~~~~i~~~~~~~~~~i~~~~~VfaR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~aLk~AdvGIams~aeasv---AA 378 (674)
.++||++|+||.++|+.+|+.|+.|+|+|||.||++||++|||||||+ +++++ ||
T Consensus 486 ---------------------~v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMg-sGTdvAkeAA 543 (679)
T PRK01122 486 ---------------------DFLAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAG 543 (679)
T ss_pred ---------------------EEEccCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEeC-CCCHHHHHhC
Confidence 278999999999999999999999999999999999999999999999 55555 79
Q ss_pred CccccccchhHHHHHHHHhhHHHHHHHHHHHH
Q psy6090 379 PFTSTVANISCVLRIIREGRAALVTSFGIFKF 410 (674)
Q Consensus 379 df~s~~~~i~~V~~~I~eGR~~l~ts~~~~k~ 410 (674)
|++..++|++.+++++++||..+.|--..--|
T Consensus 544 DiVLldd~~s~Iv~av~~GR~~~~tr~~~~~f 575 (679)
T PRK01122 544 NMVDLDSNPTKLIEVVEIGKQLLMTRGALTTF 575 (679)
T ss_pred CEEEeCCCHHHHHHHHHHHHHHHhhhHhhhhh
Confidence 99999999999999999999999754333333
No 23
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=99.95 E-value=2.9e-27 Score=268.90 Aligned_cols=165 Identities=26% Similarity=0.432 Sum_probs=150.2
Q ss_pred ccchHHHHHHHHHhhcCcEEEEEeeecccccchHHHhhhchhhhcccceeeeeehhccCCCcchHHHHHHHHhcCCeEEE
Q psy6090 142 SVPENIVSVLSEYTEQGYRVIALASRTLSIDDYKHLNYMKREDIEKDLEFLGLIILENRLKPQTEGVIKELKDARVKVVM 221 (674)
Q Consensus 142 ~~p~~~~~~l~~~~~~G~Rvla~A~k~l~~~~~~~~~~~~r~~iE~dL~flGli~~en~lk~~t~~~I~~L~~agIrvvm 221 (674)
..|.++++.++.++++|+|++++|+ |.+++|+++++|++||+++++|++||++||+++|
T Consensus 409 ~~~~~~~~~~~~~a~~G~r~l~va~---------------------~~~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~m 467 (675)
T TIGR01497 409 HIPTDLDQAVDQVARQGGTPLVVCE---------------------DNRIYGVIYLKDIVKGGIKERFAQLRKMGIKTIM 467 (675)
T ss_pred CCcHHHHHHHHHHHhCCCeEEEEEE---------------------CCEEEEEEEecccchhHHHHHHHHHHHCCCEEEE
Confidence 3578889999999999999999996 2489999999999999999999999999999999
Q ss_pred EcCCCHhhHHHHHHHcCCCCCCCeEEEEeCCCCCCCCCCceEEEEcCcchhhhhhhhccCCchhhhhccCCCCeEEEEcc
Q psy6090 222 ITGDNIQTAISVAKECGIIDPGETVVDVSAVPGGLKECPKVYFTVSGVSAIQTKAKKLNYSKTEEELGLSSGAYKFAVTG 301 (674)
Q Consensus 222 iTGDn~~TA~~vA~~~gi~~~~~~vi~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~itG 301 (674)
+||||..||..+|+++|+.
T Consensus 468 iTGD~~~ta~~iA~~lGI~------------------------------------------------------------- 486 (675)
T TIGR01497 468 ITGDNRLTAAAIAAEAGVD------------------------------------------------------------- 486 (675)
T ss_pred EcCCCHHHHHHHHHHcCCC-------------------------------------------------------------
Confidence 9999999999999999992
Q ss_pred hhHHHHHhhCchhHHHHHhhccEEEecCHHHHHHHHHHHHHcCCEEEEeCCCccchhhhhhCCcceeecCCcccc---cc
Q psy6090 302 KSWELIRDQMPELIPRIIVKGAIFARMSSDQKQQLVLELQQLGYYVAMCGDGANDCGALRAAHAGISLSEAESSV---AS 378 (674)
Q Consensus 302 ~~~~~i~~~~~~~~~~i~~~~~VfaR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~aLk~AdvGIams~aeasv---AA 378 (674)
.++||++|++|..+|+.+|+.|+.|+|+|||.||++||++||+||||+++ .++ +|
T Consensus 487 ---------------------~v~a~~~PedK~~~v~~lq~~g~~VamvGDG~NDapAL~~AdvGiAm~~g-t~~akeaa 544 (675)
T TIGR01497 487 ---------------------DFIAEATPEDKIALIRQEQAEGKLVAMTGDGTNDAPALAQADVGVAMNSG-TQAAKEAA 544 (675)
T ss_pred ---------------------EEEcCCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEeCCC-CHHHHHhC
Confidence 26889999999999999999999999999999999999999999999954 333 79
Q ss_pred CccccccchhHHHHHHHHhhHHHHHHHHHHHH
Q psy6090 379 PFTSTVANISCVLRIIREGRAALVTSFGIFKF 410 (674)
Q Consensus 379 df~s~~~~i~~V~~~I~eGR~~l~ts~~~~k~ 410 (674)
|++..++|++.+++++++||..+.|.-..-.|
T Consensus 545 divLldd~~s~Iv~av~~GR~~~~t~~~~~t~ 576 (675)
T TIGR01497 545 NMVDLDSDPTKLIEVVHIGKQLLITRGALTTF 576 (675)
T ss_pred CEEECCCCHHHHHHHHHHHHHHHHHHHHHhee
Confidence 99999999999999999999999765444333
No 24
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=99.94 E-value=1.8e-25 Score=252.14 Aligned_cols=261 Identities=30% Similarity=0.455 Sum_probs=197.3
Q ss_pred cccccccccccCCCCCCccccCCC--CCcCCceEEEEEEcCCCCcCccccccccccchHHHHHHHhhcccceecCCcccC
Q psy6090 18 CHYELPIPAIVRPPSDSQAYENHE--DSRKTRHYASVVPLQGKKLGAPIKHIQNTNEHVKLKHGMATCHSLTLINGELSG 95 (674)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~--~te~gld~~g~~~~~~~~f~~~~~~~~~~~~~~~~~~~~a~Chsl~~~~~~l~G 95 (674)
|.+-...+.++++..-...+-+++ +|+..+.+.++.+... ....|
T Consensus 215 gilvk~~~~lE~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~---------------------------------~~~s~ 261 (499)
T TIGR01494 215 GIVVRSLNALEELGKVDYICSDKTGTLTKNEMSFKKVSVLGG---------------------------------EYLSG 261 (499)
T ss_pred CcEEechhhhhhccCCcEEEeeCCCccccCceEEEEEEecCC---------------------------------CcCCC
Confidence 333344445555555555555543 7777777777654321 23578
Q ss_pred CHHHHHHHHHcCcEEeCCCCcccCCCCCccceEecCCCCCcc----ccccccchHHHHHHHHHhhcCcEEEEEeeecccc
Q psy6090 96 DPLDLKMFESTGWTLEEPNLKEDCHYELPIPAIVRPPSGDYQ----SVLISVPENIVSVLSEYTEQGYRVIALASRTLSI 171 (674)
Q Consensus 96 dpld~~m~~~t~~~l~~~~~~~~~~~~~~~~~v~~~~~~~lq----svi~~~p~~~~~~l~~~~~~G~Rvla~A~k~l~~ 171 (674)
+|+|.++.++..|..... .+.......|..+++..++.+. ..+...-.++.+.++.++++|+|++++|++.
T Consensus 262 hp~~~ai~~~~~~~~~~~--~~f~~~~~~~~~~~~~~~~~~~~G~~~~i~~~~~~~~~~~~~~~~~g~~~~~~a~~~--- 336 (499)
T TIGR01494 262 HPDERALVKSAKWKILNV--FEFSSVRKRMSVIVRGPDGTYVKGAPEFVLSRVKDLEEKVKELAQSGLRVLAVASKE--- 336 (499)
T ss_pred ChHHHHHHHHhhhcCcce--eccCCCCceEEEEEecCCcEEEeCCHHHHHHhhHHHHHHHHHHHhCCCEEEEEEECC---
Confidence 999999988876532110 0101111345566653221111 0010001124556677899999999999864
Q ss_pred cchHHHhhhchhhhcccceeeeeehhccCCCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCCCCCCCeEEEEeC
Q psy6090 172 DDYKHLNYMKREDIEKDLEFLGLIILENRLKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKECGIIDPGETVVDVSA 251 (674)
Q Consensus 172 ~~~~~~~~~~r~~iE~dL~flGli~~en~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~gi~~~~~~vi~~~~ 251 (674)
+++|++.++|++|++++++|+.|+++|++++|+|||+..||..+|+++|+
T Consensus 337 ------------------~~~g~i~l~d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi------------ 386 (499)
T TIGR01494 337 ------------------TLLGLLGLEDPLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKELGI------------ 386 (499)
T ss_pred ------------------eEEEEEEecCCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc------------
Confidence 68999999999999999999999999999999999999999999999986
Q ss_pred CCCCCCCCCceEEEEcCcchhhhhhhhccCCchhhhhccCCCCeEEEEcchhHHHHHhhCchhHHHHHhhccEEEecCHH
Q psy6090 252 VPGGLKECPKVYFTVSGVSAIQTKAKKLNYSKTEEELGLSSGAYKFAVTGKSWELIRDQMPELIPRIIVKGAIFARMSSD 331 (674)
Q Consensus 252 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~itG~~~~~i~~~~~~~~~~i~~~~~VfaR~sP~ 331 (674)
++|++|+
T Consensus 387 -------------------------------------------------------------------------~~~~~p~ 393 (499)
T TIGR01494 387 -------------------------------------------------------------------------FARVTPE 393 (499)
T ss_pred -------------------------------------------------------------------------eeccCHH
Confidence 2568899
Q ss_pred HHHHHHHHHHHcCCEEEEeCCCccchhhhhhCCcceeecCCccccccCccccccchhHHHHHHHHhhHHHHHHHHHHHHH
Q psy6090 332 QKQQLVLELQQLGYYVAMCGDGANDCGALRAAHAGISLSEAESSVASPFTSTVANISCVLRIIREGRAALVTSFGIFKFM 411 (674)
Q Consensus 332 qK~~iV~~lq~~g~~V~m~GDG~ND~~aLk~AdvGIams~aeasvAAdf~s~~~~i~~V~~~I~eGR~~l~ts~~~~k~~ 411 (674)
+|.++|+.+|+.|+.|+|+|||.||++||++|||||+|+ +..+||+++.++++..++.++++||+++.+..+.+.|.
T Consensus 394 ~K~~~v~~l~~~g~~v~~vGDg~nD~~al~~Advgia~~---a~~~adivl~~~~l~~i~~~~~~~r~~~~~i~~~~~~~ 470 (499)
T TIGR01494 394 EKAALVEALQKKGRVVAMTGDGVNDAPALKKADVGIAMG---AKAAADIVLLDDNLSTIVDALKEGRKTFSTIKSNIFWA 470 (499)
T ss_pred HHHHHHHHHHHCCCEEEEECCChhhHHHHHhCCCccccc---hHHhCCeEEecCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999998 45579999999999999999999999999999999999
Q ss_pred HHHHHHHHHHH
Q psy6090 412 VLYSLCEFFST 422 (674)
Q Consensus 412 ~~~~l~~~~~~ 422 (674)
..|+++.....
T Consensus 471 ~~~n~~~~~~a 481 (499)
T TIGR01494 471 IAYNLILIPLA 481 (499)
T ss_pred HHHHHHHHHHH
Confidence 99998854443
No 25
>KOG0205|consensus
Probab=99.92 E-value=1.8e-25 Score=240.02 Aligned_cols=206 Identities=27% Similarity=0.400 Sum_probs=164.9
Q ss_pred cccchHHHHHHHHHhhcCcEEEEEeeecccccchHHHhhhchhhhcccceeeeeehhccCCCcchHHHHHHHHhcCCeEE
Q psy6090 141 ISVPENIVSVLSEYTEQGYRVIALASRTLSIDDYKHLNYMKREDIEKDLEFLGLIILENRLKPQTEGVIKELKDARVKVV 220 (674)
Q Consensus 141 ~~~p~~~~~~l~~~~~~G~Rvla~A~k~l~~~~~~~~~~~~r~~iE~dL~flGli~~en~lk~~t~~~I~~L~~agIrvv 220 (674)
..+|++..+.++.||++|+|-||+|++..++.. .+.-..--.|+|++-+-||+|.++.++|++...-|.+|.
T Consensus 441 ~~i~~~vh~~id~~AeRGlRSLgVArq~v~e~~--------~~~~g~pw~~~gllp~fdpprhdsa~tirral~lGv~Vk 512 (942)
T KOG0205|consen 441 HDIPERVHSIIDKFAERGLRSLAVARQEVPEKT--------KESPGGPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVK 512 (942)
T ss_pred CcchHHHHHHHHHHHHhcchhhhhhhhcccccc--------ccCCCCCcccccccccCCCCccchHHHHHHHHhccceee
Confidence 568999999999999999999999999988321 222345578999999999999999999999999999999
Q ss_pred EEcCCCHhhHHHHHHHcCCCCCCCeEEEEeCCCCCCCCCCceEEEEcCcchhhhhhhhccCCchhhhhccCCCCeEEEEc
Q psy6090 221 MITGDNIQTAISVAKECGIIDPGETVVDVSAVPGGLKECPKVYFTVSGVSAIQTKAKKLNYSKTEEELGLSSGAYKFAVT 300 (674)
Q Consensus 221 miTGDn~~TA~~vA~~~gi~~~~~~vi~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~it 300 (674)
|+|||....+...+|.+||-.+-.+ ..... +...+. .+.
T Consensus 513 mitgdqlaI~keTgrrlgmgtnmyp---ss~ll-----------------------------------G~~~~~---~~~ 551 (942)
T KOG0205|consen 513 MITGDQLAIAKETGRRLGMGTNMYP---SSALL-----------------------------------GLGKDG---SMP 551 (942)
T ss_pred eecchHHHHHHhhhhhhccccCcCC---chhhc-----------------------------------cCCCCC---CCC
Confidence 9999999999999999999532110 00000 000000 001
Q ss_pred chhHHHHHhhCchhHHHHHhhccEEEecCHHHHHHHHHHHHHcCCEEEEeCCCccchhhhhhCCcceeecCCcccc--cc
Q psy6090 301 GKSWELIRDQMPELIPRIIVKGAIFARMSSDQKQQLVLELQQLGYYVAMCGDGANDCGALRAAHAGISLSEAESSV--AS 378 (674)
Q Consensus 301 G~~~~~i~~~~~~~~~~i~~~~~VfaR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~aLk~AdvGIams~aeasv--AA 378 (674)
| .....++.+..=||-+.|+||.++|+.||++|+.++|.|||+||++|||.||+||+..++.... ||
T Consensus 552 ~-----------~~v~elie~adgfAgVfpehKy~iV~~Lq~r~hi~gmtgdgvndapaLKkAdigiava~atdaar~as 620 (942)
T KOG0205|consen 552 G-----------SPVDELIEKADGFAGVFPEHKYEIVKILQERKHIVGMTGDGVNDAPALKKADIGIAVADATDAARSAS 620 (942)
T ss_pred C-----------CcHHHHhhhccCccccCHHHHHHHHHHHhhcCceecccCCCcccchhhcccccceeeccchhhhcccc
Confidence 1 1123344566779999999999999999999999999999999999999999999998875433 79
Q ss_pred CccccccchhHHHHHHHHhhHHHHHHHH
Q psy6090 379 PFTSTVANISCVLRIIREGRAALVTSFG 406 (674)
Q Consensus 379 df~s~~~~i~~V~~~I~eGR~~l~ts~~ 406 (674)
|++...+..+.+..++...|+++..+.+
T Consensus 621 diVltepglSviI~avltSraIfqrmkn 648 (942)
T KOG0205|consen 621 DIVLTEPGLSVIISAVLTSRAIFQRMKN 648 (942)
T ss_pred cEEEcCCCchhhHHHHHHHHHHHHHHhh
Confidence 9999999999999999999998775544
No 26
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=99.92 E-value=5.4e-24 Score=242.82 Aligned_cols=151 Identities=35% Similarity=0.439 Sum_probs=140.4
Q ss_pred ccceeeeeehhccCCCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCCCCCCCeEEEEeCCCCCCCCCCceEEEE
Q psy6090 187 KDLEFLGLIILENRLKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKECGIIDPGETVVDVSAVPGGLKECPKVYFTV 266 (674)
Q Consensus 187 ~dL~flGli~~en~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~gi~~~~~~vi~~~~~~~~~~~~~~i~~~~ 266 (674)
.|=.++|++.++|++||+++++|++||+.||+++|+||||..+|..||+++||.
T Consensus 524 ~dg~~~g~i~~~D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId-------------------------- 577 (713)
T COG2217 524 VDGKLVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGID-------------------------- 577 (713)
T ss_pred ECCEEEEEEEEeCCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChH--------------------------
Confidence 444799999999999999999999999999999999999999999999999993
Q ss_pred cCcchhhhhhhhccCCchhhhhccCCCCeEEEEcchhHHHHHhhCchhHHHHHhhccEEEecCHHHHHHHHHHHHHcCCE
Q psy6090 267 SGVSAIQTKAKKLNYSKTEEELGLSSGAYKFAVTGKSWELIRDQMPELIPRIIVKGAIFARMSSDQKQQLVLELQQLGYY 346 (674)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~itG~~~~~i~~~~~~~~~~i~~~~~VfaR~sP~qK~~iV~~lq~~g~~ 346 (674)
.++|.+.|++|.++|+.+|+.|+.
T Consensus 578 --------------------------------------------------------~v~AellPedK~~~V~~l~~~g~~ 601 (713)
T COG2217 578 --------------------------------------------------------EVRAELLPEDKAEIVRELQAEGRK 601 (713)
T ss_pred --------------------------------------------------------hheccCCcHHHHHHHHHHHhcCCE
Confidence 267889999999999999999999
Q ss_pred EEEeCCCccchhhhhhCCcceeecCCcccc---ccCccccccchhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Q psy6090 347 VAMCGDGANDCGALRAAHAGISLSEAESSV---ASPFTSTVANISCVLRIIREGRAALVTSFGIFKFMVLYSLCEFF 420 (674)
Q Consensus 347 V~m~GDG~ND~~aLk~AdvGIams~aeasv---AAdf~s~~~~i~~V~~~I~eGR~~l~ts~~~~k~~~~~~l~~~~ 420 (674)
|+|+|||.||.+||.+|||||||+. ++++ +||+++..++++.++++|+-+|+++.+..+++-+...|+.+...
T Consensus 602 VamVGDGINDAPALA~AdVGiAmG~-GtDvA~eaADvvL~~~dL~~v~~ai~lsr~t~~~IkqNl~~A~~yn~~~ip 677 (713)
T COG2217 602 VAMVGDGINDAPALAAADVGIAMGS-GTDVAIEAADVVLMRDDLSAVPEAIDLSRATRRIIKQNLFWAFGYNAIAIP 677 (713)
T ss_pred EEEEeCCchhHHHHhhcCeeEeecC-CcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999997 5666 69999999999999999999999999999999888888887543
No 27
>KOG0207|consensus
Probab=99.90 E-value=3.2e-23 Score=232.47 Aligned_cols=175 Identities=33% Similarity=0.477 Sum_probs=159.9
Q ss_pred cccchHHHHHHHHHhhcCcEEEEEeeecccccchHHHhhhchhhhcccceeeeeehhccCCCcchHHHHHHHHhcCCeEE
Q psy6090 141 ISVPENIVSVLSEYTEQGYRVIALASRTLSIDDYKHLNYMKREDIEKDLEFLGLIILENRLKPQTEGVIKELKDARVKVV 220 (674)
Q Consensus 141 ~~~p~~~~~~l~~~~~~G~Rvla~A~k~l~~~~~~~~~~~~r~~iE~dL~flGli~~en~lk~~t~~~I~~L~~agIrvv 220 (674)
.++|++++..++...++|.-|..+|. |=++.|++.++|++|||+..+|+.||+.||+++
T Consensus 685 ~~~~~~i~~~~~~~e~~g~tvv~v~v---------------------n~~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~ 743 (951)
T KOG0207|consen 685 CSIPDDILDALTESERKGQTVVYVAV---------------------NGQLVGVFALEDQVRPDAALAVAELKSMGIKVV 743 (951)
T ss_pred CCCchhHHHhhhhHhhcCceEEEEEE---------------------CCEEEEEEEeccccchhHHHHHHHHHhcCceEE
Confidence 34678888888888899998888885 226899999999999999999999999999999
Q ss_pred EEcCCCHhhHHHHHHHcCCCCCCCeEEEEeCCCCCCCCCCceEEEEcCcchhhhhhhhccCCchhhhhccCCCCeEEEEc
Q psy6090 221 MITGDNIQTAISVAKECGIIDPGETVVDVSAVPGGLKECPKVYFTVSGVSAIQTKAKKLNYSKTEEELGLSSGAYKFAVT 300 (674)
Q Consensus 221 miTGDn~~TA~~vA~~~gi~~~~~~vi~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~it 300 (674)
|+||||..||.++|+++|+.
T Consensus 744 mLTGDn~~aA~svA~~VGi~------------------------------------------------------------ 763 (951)
T KOG0207|consen 744 MLTGDNDAAARSVAQQVGID------------------------------------------------------------ 763 (951)
T ss_pred EEcCCCHHHHHHHHHhhCcc------------------------------------------------------------
Confidence 99999999999999999962
Q ss_pred chhHHHHHhhCchhHHHHHhhccEEEecCHHHHHHHHHHHHHcCCEEEEeCCCccchhhhhhCCcceeecCCcccc---c
Q psy6090 301 GKSWELIRDQMPELIPRIIVKGAIFARMSSDQKQQLVLELQQLGYYVAMCGDGANDCGALRAAHAGISLSEAESSV---A 377 (674)
Q Consensus 301 G~~~~~i~~~~~~~~~~i~~~~~VfaR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~aLk~AdvGIams~aeasv---A 377 (674)
.|+|...|+||.+.|+.+|+.+..|+|+|||.||++||.+|||||+|+.. +++ |
T Consensus 764 ----------------------~V~aev~P~~K~~~Ik~lq~~~~~VaMVGDGINDaPALA~AdVGIaig~g-s~vAiea 820 (951)
T KOG0207|consen 764 ----------------------NVYAEVLPEQKAEKIKEIQKNGGPVAMVGDGINDAPALAQADVGIAIGAG-SDVAIEA 820 (951)
T ss_pred ----------------------eEEeccCchhhHHHHHHHHhcCCcEEEEeCCCCccHHHHhhccceeeccc-cHHHHhh
Confidence 48899999999999999999999999999999999999999999999976 555 6
Q ss_pred cCccccccchhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Q psy6090 378 SPFTSTVANISCVLRIIREGRAALVTSFGIFKFMVLYSLCEF 419 (674)
Q Consensus 378 Adf~s~~~~i~~V~~~I~eGR~~l~ts~~~~k~~~~~~l~~~ 419 (674)
||+++..+++..|+.+|.-.|.+..+...+|-+...|++...
T Consensus 821 ADIVLmrn~L~~v~~ai~LSrkt~~rIk~N~~~A~~yn~~~I 862 (951)
T KOG0207|consen 821 ADIVLMRNDLRDVPFAIDLSRKTVKRIKLNFVWALIYNLVGI 862 (951)
T ss_pred CCEEEEccchhhhHHHHHHHHHHHhhHHHHHHHHHHHHHhhh
Confidence 999999999999999999999999998888888888888743
No 28
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=99.88 E-value=9.3e-22 Score=230.07 Aligned_cols=173 Identities=27% Similarity=0.356 Sum_probs=153.1
Q ss_pred cchHHHHHHHHHhhcCcEEEEEeeecccccchHHHhhhchhhhcccceeeeeehhccCCCcchHHHHHHHHhcCCeEEEE
Q psy6090 143 VPENIVSVLSEYTEQGYRVIALASRTLSIDDYKHLNYMKREDIEKDLEFLGLIILENRLKPQTEGVIKELKDARVKVVMI 222 (674)
Q Consensus 143 ~p~~~~~~l~~~~~~G~Rvla~A~k~l~~~~~~~~~~~~r~~iE~dL~flGli~~en~lk~~t~~~I~~L~~agIrvvmi 222 (674)
+.+++.+.++.+..+|+|++++|+ |.+++|+++++|++||+++++|++|++.|++++|+
T Consensus 532 ~~~~~~~~~~~~~~~g~~~v~va~---------------------~~~~~g~i~l~d~~r~~a~~~i~~L~~~gi~~~ll 590 (741)
T PRK11033 532 LADAFAGQINELESAGKTVVLVLR---------------------NDDVLGLIALQDTLRADARQAISELKALGIKGVML 590 (741)
T ss_pred ccHHHHHHHHHHHhCCCEEEEEEE---------------------CCEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEE
Confidence 455677778899999999999996 34799999999999999999999999999999999
Q ss_pred cCCCHhhHHHHHHHcCCCCCCCeEEEEeCCCCCCCCCCceEEEEcCcchhhhhhhhccCCchhhhhccCCCCeEEEEcch
Q psy6090 223 TGDNIQTAISVAKECGIIDPGETVVDVSAVPGGLKECPKVYFTVSGVSAIQTKAKKLNYSKTEEELGLSSGAYKFAVTGK 302 (674)
Q Consensus 223 TGDn~~TA~~vA~~~gi~~~~~~vi~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~itG~ 302 (674)
|||+..+|..+|+++||.
T Consensus 591 TGd~~~~a~~ia~~lgi~-------------------------------------------------------------- 608 (741)
T PRK11033 591 TGDNPRAAAAIAGELGID-------------------------------------------------------------- 608 (741)
T ss_pred cCCCHHHHHHHHHHcCCC--------------------------------------------------------------
Confidence 999999999999999992
Q ss_pred hHHHHHhhCchhHHHHHhhccEEEecCHHHHHHHHHHHHHcCCEEEEeCCCccchhhhhhCCcceeecCCcccc--ccCc
Q psy6090 303 SWELIRDQMPELIPRIIVKGAIFARMSSDQKQQLVLELQQLGYYVAMCGDGANDCGALRAAHAGISLSEAESSV--ASPF 380 (674)
Q Consensus 303 ~~~~i~~~~~~~~~~i~~~~~VfaR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~aLk~AdvGIams~aeasv--AAdf 380 (674)
.+++..|++|..+|+.+|+. +.|+|+|||.||.+||++|||||+|+++.... +||+
T Consensus 609 ---------------------~~~~~~p~~K~~~v~~l~~~-~~v~mvGDgiNDapAl~~A~vgia~g~~~~~a~~~adi 666 (741)
T PRK11033 609 ---------------------FRAGLLPEDKVKAVTELNQH-APLAMVGDGINDAPAMKAASIGIAMGSGTDVALETADA 666 (741)
T ss_pred ---------------------eecCCCHHHHHHHHHHHhcC-CCEEEEECCHHhHHHHHhCCeeEEecCCCHHHHHhCCE
Confidence 12346799999999999965 58999999999999999999999999643222 6999
Q ss_pred cccccchhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Q psy6090 381 TSTVANISCVLRIIREGRAALVTSFGIFKFMVLYSLCEFF 420 (674)
Q Consensus 381 ~s~~~~i~~V~~~I~eGR~~l~ts~~~~k~~~~~~l~~~~ 420 (674)
++..+++..++++|+.||.++.+..+++.+.+.|+++.+.
T Consensus 667 vl~~~~l~~l~~~i~~sr~~~~~I~~nl~~a~~~n~~~i~ 706 (741)
T PRK11033 667 ALTHNRLRGLAQMIELSRATHANIRQNITIALGLKAIFLV 706 (741)
T ss_pred EEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999998888888888876443
No 29
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=99.85 E-value=4.3e-21 Score=202.46 Aligned_cols=159 Identities=30% Similarity=0.486 Sum_probs=142.1
Q ss_pred ccchHHHHHHHHHhhcCcEEEEEeeecccccchHHHhhhchhhhcccceeeeeehhccCCCcchHHHHHHHHhcCCeEEE
Q psy6090 142 SVPENIVSVLSEYTEQGYRVIALASRTLSIDDYKHLNYMKREDIEKDLEFLGLIILENRLKPQTEGVIKELKDARVKVVM 221 (674)
Q Consensus 142 ~~p~~~~~~l~~~~~~G~Rvla~A~k~l~~~~~~~~~~~~r~~iE~dL~flGli~~en~lk~~t~~~I~~L~~agIrvvm 221 (674)
..|++++...++-++.|=..|+++. |=.++|.+-++|-+||+.+|-+.+||+-|||++|
T Consensus 410 ~~p~~l~~~~~~vs~~GGTPL~V~~---------------------~~~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM 468 (681)
T COG2216 410 HIPEDLDAAVDEVSRLGGTPLVVVE---------------------NGRILGVIYLKDIVKPGIKERFAELRKMGIKTVM 468 (681)
T ss_pred CCCHHHHHHHHHHHhcCCCceEEEE---------------------CCEEEEEEEehhhcchhHHHHHHHHHhcCCeEEE
Confidence 4799999999999999988888874 3368999999999999999999999999999999
Q ss_pred EcCCCHhhHHHHHHHcCCCCCCCeEEEEeCCCCCCCCCCceEEEEcCcchhhhhhhhccCCchhhhhccCCCCeEEEEcc
Q psy6090 222 ITGDNIQTAISVAKECGIIDPGETVVDVSAVPGGLKECPKVYFTVSGVSAIQTKAKKLNYSKTEEELGLSSGAYKFAVTG 301 (674)
Q Consensus 222 iTGDn~~TA~~vA~~~gi~~~~~~vi~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~itG 301 (674)
+||||+.||..||.|.|..+
T Consensus 469 ~TGDN~~TAa~IA~EAGVDd------------------------------------------------------------ 488 (681)
T COG2216 469 ITGDNPLTAAAIAAEAGVDD------------------------------------------------------------ 488 (681)
T ss_pred EeCCCHHHHHHHHHHhCchh------------------------------------------------------------
Confidence 99999999999999999931
Q ss_pred hhHHHHHhhCchhHHHHHhhccEEEecCHHHHHHHHHHHHHcCCEEEEeCCCccchhhhhhCCcceeecCCcccc--ccC
Q psy6090 302 KSWELIRDQMPELIPRIIVKGAIFARMSSDQKQQLVLELQQLGYYVAMCGDGANDCGALRAAHAGISLSEAESSV--ASP 379 (674)
Q Consensus 302 ~~~~~i~~~~~~~~~~i~~~~~VfaR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~aLk~AdvGIams~aeasv--AAd 379 (674)
..|.++|++|..+|+.-|..|+.|+|||||+||++||.+||||+||......- |+.
T Consensus 489 ----------------------fiAeatPEdK~~~I~~eQ~~grlVAMtGDGTNDAPALAqAdVg~AMNsGTqAAkEAaN 546 (681)
T COG2216 489 ----------------------FIAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAAN 546 (681)
T ss_pred ----------------------hhhcCChHHHHHHHHHHHhcCcEEEEcCCCCCcchhhhhcchhhhhccccHHHHHhhc
Confidence 24568999999999999999999999999999999999999999998654333 788
Q ss_pred ccccccchhHHHHHHHHhhHHHHH
Q psy6090 380 FTSTVANISCVLRIIREGRAALVT 403 (674)
Q Consensus 380 f~s~~~~i~~V~~~I~eGR~~l~t 403 (674)
++-.+.|-.-+.++++-|+..|.|
T Consensus 547 MVDLDS~PTKlievV~IGKqlLiT 570 (681)
T COG2216 547 MVDLDSNPTKLIEVVEIGKQLLIT 570 (681)
T ss_pred ccccCCCccceehHhhhhhhheee
Confidence 998899999999999999887753
No 30
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=99.83 E-value=1.5e-19 Score=206.16 Aligned_cols=283 Identities=26% Similarity=0.278 Sum_probs=203.5
Q ss_pred CCcccccccccccCCCCCCccccCCC--CCcCCceEEEEEEcCCCCcCccccccccccchHHHHHHHhhcccceecCCcc
Q psy6090 16 EDCHYELPIPAIVRPPSDSQAYENHE--DSRKTRHYASVVPLQGKKLGAPIKHIQNTNEHVKLKHGMATCHSLTLINGEL 93 (674)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~te~gld~~g~~~~~~~~f~~~~~~~~~~~~~~~~~~~~a~Chsl~~~~~~l 93 (674)
..|.+--....++++..-....-+++ +|+..+++..+.+..+.. ... ..++...+.+. +-
T Consensus 229 ~~gilvk~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~----------~~~-~~~l~~a~~~e-------~~ 290 (556)
T TIGR01525 229 RRGILIKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVEPLDDAS----------ISE-EELLALAAALE-------QS 290 (556)
T ss_pred HCCceecCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEEecCCCC----------ccH-HHHHHHHHHHh-------cc
Confidence 34555556667777777777666655 899999999987764321 001 33443323222 12
Q ss_pred cCCHHHHHHHHHcCc-EEeCCCCcccCCCC-CccceEecCCCCCcc----ccc---cccchHHHHHHHHHhhcCcEEEEE
Q psy6090 94 SGDPLDLKMFESTGW-TLEEPNLKEDCHYE-LPIPAIVRPPSGDYQ----SVL---ISVPENIVSVLSEYTEQGYRVIAL 164 (674)
Q Consensus 94 ~Gdpld~~m~~~t~~-~l~~~~~~~~~~~~-~~~~~v~~~~~~~lq----svi---~~~p~~~~~~l~~~~~~G~Rvla~ 164 (674)
.++|++.++.+...- .++.....+..... .-....++.. .... +.+ ....+++.+.++.++++|+|++.+
T Consensus 291 ~~hp~~~Ai~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~g~-~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v 369 (556)
T TIGR01525 291 SSHPLARAIVRYAKKRGLELPKQEDVEEVPGKGVEATVDGQ-EEVRIGNPRLLELAAEPISASPDLLNEGESQGKTVVFV 369 (556)
T ss_pred CCChHHHHHHHHHHhcCCCcccccCeeEecCCeEEEEECCe-eEEEEecHHHHhhcCCCchhhHHHHHHHhhCCcEEEEE
Confidence 478999998765421 11111000000000 0011111100 0110 111 011123345677889999999999
Q ss_pred eeecccccchHHHhhhchhhhcccceeeeeehhccCCCcchHHHHHHHHhcC-CeEEEEcCCCHhhHHHHHHHcCCCCCC
Q psy6090 165 ASRTLSIDDYKHLNYMKREDIEKDLEFLGLIILENRLKPQTEGVIKELKDAR-VKVVMITGDNIQTAISVAKECGIIDPG 243 (674)
Q Consensus 165 A~k~l~~~~~~~~~~~~r~~iE~dL~flGli~~en~lk~~t~~~I~~L~~ag-IrvvmiTGDn~~TA~~vA~~~gi~~~~ 243 (674)
|. |.+++|.+.++|+++|+++++|++|+++| ++++|+|||+..++..+++++|+.
T Consensus 370 ~~---------------------~~~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~--- 425 (556)
T TIGR01525 370 AV---------------------DGELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGID--- 425 (556)
T ss_pred EE---------------------CCEEEEEEEecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCC---
Confidence 84 34799999999999999999999999999 999999999999999999999992
Q ss_pred CeEEEEeCCCCCCCCCCceEEEEcCcchhhhhhhhccCCchhhhhccCCCCeEEEEcchhHHHHHhhCchhHHHHHhhcc
Q psy6090 244 ETVVDVSAVPGGLKECPKVYFTVSGVSAIQTKAKKLNYSKTEEELGLSSGAYKFAVTGKSWELIRDQMPELIPRIIVKGA 323 (674)
Q Consensus 244 ~~vi~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~itG~~~~~i~~~~~~~~~~i~~~~~ 323 (674)
.
T Consensus 426 -------------------------------------------------------------------------------~ 426 (556)
T TIGR01525 426 -------------------------------------------------------------------------------E 426 (556)
T ss_pred -------------------------------------------------------------------------------e
Confidence 2
Q ss_pred EEEecCHHHHHHHHHHHHHcCCEEEEeCCCccchhhhhhCCcceeecCCcccc--ccCccccccchhHHHHHHHHhhHHH
Q psy6090 324 IFARMSSDQKQQLVLELQQLGYYVAMCGDGANDCGALRAAHAGISLSEAESSV--ASPFTSTVANISCVLRIIREGRAAL 401 (674)
Q Consensus 324 VfaR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~aLk~AdvGIams~aeasv--AAdf~s~~~~i~~V~~~I~eGR~~l 401 (674)
+|++..|++|..+++.+++.++.|+|+|||.||.+|+++||+||+++++.... +||++..+++++.++++++.||.+.
T Consensus 427 ~f~~~~p~~K~~~v~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~Ad~vi~~~~~~~l~~~i~~~r~~~ 506 (556)
T TIGR01525 427 VHAELLPEDKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMGAGSDVAIEAADIVLLNDDLSSLPTAIDLSRKTR 506 (556)
T ss_pred eeccCCHHHHHHHHHHHHHcCCEEEEEECChhHHHHHhhCCEeEEeCCCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHH
Confidence 56777899999999999999999999999999999999999999999543222 6999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q psy6090 402 VTSFGIFKFMVLYSLCEFF 420 (674)
Q Consensus 402 ~ts~~~~k~~~~~~l~~~~ 420 (674)
.+..+.+.|.+.|+++...
T Consensus 507 ~~i~~nl~~a~~~N~~~i~ 525 (556)
T TIGR01525 507 RIIKQNLAWALGYNLVAIP 525 (556)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999999999999988653
No 31
>PRK10671 copA copper exporting ATPase; Provisional
Probab=99.82 E-value=3.8e-19 Score=211.91 Aligned_cols=173 Identities=27% Similarity=0.335 Sum_probs=155.5
Q ss_pred hHHHHHHHHHhhcCcEEEEEeeecccccchHHHhhhchhhhcccceeeeeehhccCCCcchHHHHHHHHhcCCeEEEEcC
Q psy6090 145 ENIVSVLSEYTEQGYRVIALASRTLSIDDYKHLNYMKREDIEKDLEFLGLIILENRLKPQTEGVIKELKDARVKVVMITG 224 (674)
Q Consensus 145 ~~~~~~l~~~~~~G~Rvla~A~k~l~~~~~~~~~~~~r~~iE~dL~flGli~~en~lk~~t~~~I~~L~~agIrvvmiTG 224 (674)
+.+.+.++.++++|.+++.+|+. -.++|++.++|++||+++++|++|++.|++++|+||
T Consensus 616 ~~~~~~~~~~~~~g~~~v~va~~---------------------~~~~g~~~l~d~~r~~a~~~i~~L~~~gi~v~~~Tg 674 (834)
T PRK10671 616 KALEAEITAQASQGATPVLLAVD---------------------GKAAALLAIRDPLRSDSVAALQRLHKAGYRLVMLTG 674 (834)
T ss_pred HHHHHHHHHHHhCCCeEEEEEEC---------------------CEEEEEEEccCcchhhHHHHHHHHHHCCCeEEEEcC
Confidence 44667778889999999999862 257999999999999999999999999999999999
Q ss_pred CCHhhHHHHHHHcCCCCCCCeEEEEeCCCCCCCCCCceEEEEcCcchhhhhhhhccCCchhhhhccCCCCeEEEEcchhH
Q psy6090 225 DNIQTAISVAKECGIIDPGETVVDVSAVPGGLKECPKVYFTVSGVSAIQTKAKKLNYSKTEEELGLSSGAYKFAVTGKSW 304 (674)
Q Consensus 225 Dn~~TA~~vA~~~gi~~~~~~vi~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~itG~~~ 304 (674)
|+..+|..+++++|+.
T Consensus 675 d~~~~a~~ia~~lgi~---------------------------------------------------------------- 690 (834)
T PRK10671 675 DNPTTANAIAKEAGID---------------------------------------------------------------- 690 (834)
T ss_pred CCHHHHHHHHHHcCCC----------------------------------------------------------------
Confidence 9999999999999993
Q ss_pred HHHHhhCchhHHHHHhhccEEEecCHHHHHHHHHHHHHcCCEEEEeCCCccchhhhhhCCcceeecCCcccc--ccCccc
Q psy6090 305 ELIRDQMPELIPRIIVKGAIFARMSSDQKQQLVLELQQLGYYVAMCGDGANDCGALRAAHAGISLSEAESSV--ASPFTS 382 (674)
Q Consensus 305 ~~i~~~~~~~~~~i~~~~~VfaR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~aLk~AdvGIams~aeasv--AAdf~s 382 (674)
.+|++..|++|.++++.++..++.|+|+|||.||.+|+++||+||+|+++.... +||++.
T Consensus 691 ------------------~~~~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~Agvgia~g~g~~~a~~~ad~vl 752 (834)
T PRK10671 691 ------------------EVIAGVLPDGKAEAIKRLQSQGRQVAMVGDGINDAPALAQADVGIAMGGGSDVAIETAAITL 752 (834)
T ss_pred ------------------EEEeCCCHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHHHhCCeeEEecCCCHHHHHhCCEEE
Confidence 156677899999999999999999999999999999999999999999754333 799999
Q ss_pred cccchhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Q psy6090 383 TVANISCVLRIIREGRAALVTSFGIFKFMVLYSLCEFF 420 (674)
Q Consensus 383 ~~~~i~~V~~~I~eGR~~l~ts~~~~k~~~~~~l~~~~ 420 (674)
..++++.|.++++.||.++.+..+++.+.+.|+++...
T Consensus 753 ~~~~~~~i~~~i~l~r~~~~~i~~Nl~~a~~yn~~~i~ 790 (834)
T PRK10671 753 MRHSLMGVADALAISRATLRNMKQNLLGAFIYNSLGIP 790 (834)
T ss_pred ecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999987543
No 32
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=99.78 E-value=2.3e-18 Score=195.37 Aligned_cols=154 Identities=32% Similarity=0.395 Sum_probs=139.1
Q ss_pred hcccceeeeeehhccCCCcchHHHHHHHHhcCC-eEEEEcCCCHhhHHHHHHHcCCCCCCCeEEEEeCCCCCCCCCCceE
Q psy6090 185 IEKDLEFLGLIILENRLKPQTEGVIKELKDARV-KVVMITGDNIQTAISVAKECGIIDPGETVVDVSAVPGGLKECPKVY 263 (674)
Q Consensus 185 iE~dL~flGli~~en~lk~~t~~~I~~L~~agI-rvvmiTGDn~~TA~~vA~~~gi~~~~~~vi~~~~~~~~~~~~~~i~ 263 (674)
+..|..++|.+.++|+++|+++++|++|+++|+ +++|+|||+..+|..+++++|+.
T Consensus 347 v~~~~~~~g~i~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~----------------------- 403 (536)
T TIGR01512 347 VARDGTYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGID----------------------- 403 (536)
T ss_pred EEECCEEEEEEEEeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCCh-----------------------
Confidence 456789999999999999999999999999999 99999999999999999999992
Q ss_pred EEEcCcchhhhhhhhccCCchhhhhccCCCCeEEEEcchhHHHHHhhCchhHHHHHhhccEEEecCHHHHHHHHHHHHHc
Q psy6090 264 FTVSGVSAIQTKAKKLNYSKTEEELGLSSGAYKFAVTGKSWELIRDQMPELIPRIIVKGAIFARMSSDQKQQLVLELQQL 343 (674)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~itG~~~~~i~~~~~~~~~~i~~~~~VfaR~sP~qK~~iV~~lq~~ 343 (674)
.+|++..|++|..+++.+++.
T Consensus 404 -----------------------------------------------------------~~f~~~~p~~K~~~i~~l~~~ 424 (536)
T TIGR01512 404 -----------------------------------------------------------EVHAELLPEDKLEIVKELREK 424 (536)
T ss_pred -----------------------------------------------------------hhhhccCcHHHHHHHHHHHhc
Confidence 135567799999999999999
Q ss_pred CCEEEEeCCCccchhhhhhCCcceeecCCcccc---ccCccccccchhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Q psy6090 344 GYYVAMCGDGANDCGALRAAHAGISLSEAESSV---ASPFTSTVANISCVLRIIREGRAALVTSFGIFKFMVLYSLCEFF 420 (674)
Q Consensus 344 g~~V~m~GDG~ND~~aLk~AdvGIams~aeasv---AAdf~s~~~~i~~V~~~I~eGR~~l~ts~~~~k~~~~~~l~~~~ 420 (674)
+..|+|+|||.||++|+++||+||+++.....+ +||++..+++++.+.++++.||.+..+..+.+.|...|+++...
T Consensus 425 ~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~~ad~vl~~~~l~~l~~~i~~~r~~~~~i~~nl~~a~~~n~~~i~ 504 (536)
T TIGR01512 425 YGPVAMVGDGINDAPALAAADVGIAMGASGSDVAIETADVVLLNDDLSRLPQAIRLARRTRRIVKQNVVIALGIILLLIL 504 (536)
T ss_pred CCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHHHHHhCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999322222 69999999999999999999999999999999999999877443
No 33
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=99.78 E-value=2.7e-18 Score=195.67 Aligned_cols=149 Identities=35% Similarity=0.461 Sum_probs=136.3
Q ss_pred ccceeeeeehhccCCCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCCCCCCCeEEEEeCCCCCCCCCCceEEEE
Q psy6090 187 KDLEFLGLIILENRLKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKECGIIDPGETVVDVSAVPGGLKECPKVYFTV 266 (674)
Q Consensus 187 ~dL~flGli~~en~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~gi~~~~~~vi~~~~~~~~~~~~~~i~~~~ 266 (674)
.|.+++|++.++++++|+++++|++||+.|++++|+|||+..++..+++++|+.
T Consensus 392 ~~~~~~g~~~~~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~-------------------------- 445 (562)
T TIGR01511 392 VNGELAGVFALEDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN-------------------------- 445 (562)
T ss_pred ECCEEEEEEEecccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc--------------------------
Confidence 466899999999999999999999999999999999999999999999999991
Q ss_pred cCcchhhhhhhhccCCchhhhhccCCCCeEEEEcchhHHHHHhhCchhHHHHHhhccEEEecCHHHHHHHHHHHHHcCCE
Q psy6090 267 SGVSAIQTKAKKLNYSKTEEELGLSSGAYKFAVTGKSWELIRDQMPELIPRIIVKGAIFARMSSDQKQQLVLELQQLGYY 346 (674)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~itG~~~~~i~~~~~~~~~~i~~~~~VfaR~sP~qK~~iV~~lq~~g~~ 346 (674)
+|++..|++|.++++.+++.++.
T Consensus 446 ---------------------------------------------------------~~~~~~p~~K~~~v~~l~~~~~~ 468 (562)
T TIGR01511 446 ---------------------------------------------------------VRAEVLPDDKAALIKELQEKGRV 468 (562)
T ss_pred ---------------------------------------------------------EEccCChHHHHHHHHHHHHcCCE
Confidence 23455789999999999999999
Q ss_pred EEEeCCCccchhhhhhCCcceeecCCcccc---ccCccccccchhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Q psy6090 347 VAMCGDGANDCGALRAAHAGISLSEAESSV---ASPFTSTVANISCVLRIIREGRAALVTSFGIFKFMVLYSLCEF 419 (674)
Q Consensus 347 V~m~GDG~ND~~aLk~AdvGIams~aeasv---AAdf~s~~~~i~~V~~~I~eGR~~l~ts~~~~k~~~~~~l~~~ 419 (674)
|+|+|||.||.+|+++||+||+++.+. .+ +||++..+++++.++++++.+|.++.+..+++.+.+.|+++..
T Consensus 469 v~~VGDg~nD~~al~~A~vgia~g~g~-~~a~~~Advvl~~~~l~~l~~~i~lsr~~~~~i~qn~~~a~~~n~~~i 543 (562)
T TIGR01511 469 VAMVGDGINDAPALAQADVGIAIGAGT-DVAIEAADVVLMRNDLNDVATAIDLSRKTLRRIKQNLLWAFGYNVIAI 543 (562)
T ss_pred EEEEeCCCccHHHHhhCCEEEEeCCcC-HHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999643 33 6899999999999999999999999999999999988988754
No 34
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=99.64 E-value=1.7e-16 Score=158.48 Aligned_cols=97 Identities=45% Similarity=0.671 Sum_probs=90.7
Q ss_pred cceeeeeehhccCCCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCCCCCCCeEEEEeCCCCCCCCCCceEEEEc
Q psy6090 188 DLEFLGLIILENRLKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKECGIIDPGETVVDVSAVPGGLKECPKVYFTVS 267 (674)
Q Consensus 188 dL~flGli~~en~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~gi~~~~~~vi~~~~~~~~~~~~~~i~~~~~ 267 (674)
++.++|.+.+.|+++|+++++|++|+++|++++|+|||+..+|..+|+++||.+
T Consensus 115 ~~~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~-------------------------- 168 (215)
T PF00702_consen 115 NLIFLGLFGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFD-------------------------- 168 (215)
T ss_dssp SHEEEEEEEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCS--------------------------
T ss_pred cCeEEEEEeecCcchhhhhhhhhhhhccCcceeeeecccccccccccccccccc--------------------------
Confidence 789999999999999999999999999999999999999999999999999921
Q ss_pred CcchhhhhhhhccCCchhhhhccCCCCeEEEEcchhHHHHHhhCchhHHHHHhhccEEEec--CHHHH--HHHHHHHHHc
Q psy6090 268 GVSAIQTKAKKLNYSKTEEELGLSSGAYKFAVTGKSWELIRDQMPELIPRIIVKGAIFARM--SSDQK--QQLVLELQQL 343 (674)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~itG~~~~~i~~~~~~~~~~i~~~~~VfaR~--sP~qK--~~iV~~lq~~ 343 (674)
..+|+++ +|++| .++++.++..
T Consensus 169 ------------------------------------------------------~~v~a~~~~kP~~k~~~~~i~~l~~~ 194 (215)
T PF00702_consen 169 ------------------------------------------------------SIVFARVIGKPEPKIFLRIIKELQVK 194 (215)
T ss_dssp ------------------------------------------------------EEEEESHETTTHHHHHHHHHHHHTCT
T ss_pred ------------------------------------------------------ccccccccccccchhHHHHHHHHhcC
Confidence 1488888 99999 9999999966
Q ss_pred CCEEEEeCCCccchhhhhhCC
Q psy6090 344 GYYVAMCGDGANDCGALRAAH 364 (674)
Q Consensus 344 g~~V~m~GDG~ND~~aLk~Ad 364 (674)
+..|+|+|||.||++|+|+||
T Consensus 195 ~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 195 PGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp GGGEEEEESSGGHHHHHHHSS
T ss_pred CCEEEEEccCHHHHHHHHhCc
Confidence 669999999999999999997
No 35
>PF00689 Cation_ATPase_C: Cation transporting ATPase, C-terminus; InterPro: IPR006068 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved C-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3A3Y_A 2ZXE_A 2XZB_A 3B9B_A 3N5K_A 3FPS_A 3B9R_A 1WPG_C 2AGV_A 2O9J_A ....
Probab=99.53 E-value=6.9e-14 Score=136.64 Aligned_cols=173 Identities=18% Similarity=0.220 Sum_probs=125.1
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHccCCCCCCCCcCCCCC---CCccchHHHHHHHHHHHHHHHHHHHHHHHHhhc-ccc
Q psy6090 429 DSNLTDFEFLYIDIALVVNFAFFFGRNHAFSGPLTSETPL---NSLFSYVTLLSMFFQLILMVSMQIISFIIVHKF-AWF 504 (674)
Q Consensus 429 ~~~l~~~q~L~idl~~~~~~~~~l~~~~p~~~~L~~~~P~---~~l~s~~~~~si~~q~~i~~~~~~~~~~~~~~~-~w~ 504 (674)
+.|+++.|+||+|++++.+++++++.++|++ .+|+++|+ +++++++.+..++.++++.+++.+.+|++.... +|-
T Consensus 1 P~Pl~~~qiL~inli~d~~~a~al~~e~~~~-~im~r~Pr~~~~~l~~~~~~~~i~~~g~~~~~~~~~~f~~~~~~~~~~ 79 (182)
T PF00689_consen 1 PLPLTPIQILWINLITDLLPALALGFEPPDP-DIMKRPPRDPNEPLINKRLLRRILIQGLIMAAACFFAFFLGLYIFGWD 79 (182)
T ss_dssp S-SS-HHHHHHHHHTTTHHHHHHGGGSS-ST-TGGGS---TTTS-SSSHHHHHHHCCHHHHHHHHHHHHHHHHHHSTCSS
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHhcCcchh-hhhhccccccchhhccHHhHhHHHHHHHHHHHHHHHHHHHHhhccccc
Confidence 4689999999999999999999999999999 89988884 689999999999999999999999998877652 211
Q ss_pred cccccCCCCccCcchhhHHHH-HHHHHHHHHHHHhcC-CCCcc-cccccchhHHHHHHHHHHHHHHhhcccchhhhhcce
Q psy6090 505 EPFVYTNAISYSCYENYAVFS-ISMFQYIILAITFSQ-GKPYR-TPIYKNKLFILSIIIMTWVCIYITLIPSEFIIQFLQ 581 (674)
Q Consensus 505 ~~~~~~~~~~~~~~~~t~~f~-~~~~q~~~~~~v~s~-g~pfr-~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 581 (674)
... .+.......|+.|. ++.+|.++...+++. ++.|+ ++.++|+.+++++++.+++++++++. |.++..|+
T Consensus 80 ~~~----~~~~~~~a~T~~F~~lv~~q~~~~~~~r~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~i~~~--P~~~~~f~ 153 (182)
T PF00689_consen 80 EET----NNDNLAQAQTMAFTALVLSQLFNAFNCRSRRRSVFRFRGIFSNKWLLIAILISIALQILIVYV--PGLNRIFG 153 (182)
T ss_dssp SHH----HTTCHHHHHHHHHHHHHHHHHHHHHHTSSSSSTCTT-STGGGSHHHHHHHHHHHHHHHHHHHS--TTHHHHST
T ss_pred ccc----chhHHHHHHHHHHHHHHHHHHhhhcccccccccceecccccccchHHHHHHHHHHHHHHHhcc--hhhHhhhc
Confidence 110 01113345777774 666788888888874 45677 78889999999999999999888886 56899999
Q ss_pred ecCCCCCcHHHHHHHHHHHHHHHHHHHH
Q psy6090 582 LRFPPNMQFPLIVIYLAICNFVLSLFIE 609 (674)
Q Consensus 582 l~~~p~~~~~~~l~~~~~~~~~~~~~~e 609 (674)
+.+++ ...+...++++++.+++.++.|
T Consensus 154 ~~~l~-~~~w~~~l~~~~~~~~~~ei~K 180 (182)
T PF00689_consen 154 TAPLP-LWQWLICLALALLPFIVDEIRK 180 (182)
T ss_dssp ----T-HHHHHCHHHHHCHHHHHHHHHH
T ss_pred ccCCC-HHHHHHHHHHHHHHHHHHHHHH
Confidence 99998 4444555666666666665555
No 36
>KOG4383|consensus
Probab=99.48 E-value=3.4e-13 Score=146.09 Aligned_cols=307 Identities=16% Similarity=0.195 Sum_probs=185.7
Q ss_pred ccceeeeeehhccCCCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCCCCCCCeEEEEeCCCCCCCCCCce--EE
Q psy6090 187 KDLEFLGLIILENRLKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKECGIIDPGETVVDVSAVPGGLKECPKV--YF 264 (674)
Q Consensus 187 ~dL~flGli~~en~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~gi~~~~~~vi~~~~~~~~~~~~~~i--~~ 264 (674)
++.+|.|++....+.+++....|+.|-++.||.|..+-.+.+...-.|.++||...++..|.....+..-...... ..
T Consensus 813 sGQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELkSkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q 892 (1354)
T KOG4383|consen 813 SGQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELKSKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQ 892 (1354)
T ss_pred ccchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHHHHHHHHHhccccccceeEEeccCCCCCcccCCCCChh
Confidence 6789999999999999999999999999999999999999999999999999999988888776443221110000 00
Q ss_pred EEcCcchhhhhhhhccCCchh-----hhhccCCCCeEEE-Ec---------------chhHHHHHhhCchhHHHHHhhcc
Q psy6090 265 TVSGVSAIQTKAKKLNYSKTE-----EELGLSSGAYKFA-VT---------------GKSWELIRDQMPELIPRIIVKGA 323 (674)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~-it---------------G~~~~~i~~~~~~~~~~i~~~~~ 323 (674)
.-...+.......++...+.+ .+.+ ......+. ++ .......+-|. +.++++..-+.
T Consensus 893 ~a~qkpSlhddlnqia~ddaeg~lL~~Eeg-~~dliSfq~~dsdi~kf~ed~N~AkLPrGihnVRPHL-~~iDNVPLLV~ 970 (1354)
T KOG4383|consen 893 FAAQKPSLHDDLNQIALDDAEGELLDCEEG-ARDLISFQKMDSDIAKFAEDPNIAKLPRGIHNVRPHL-DEIDNVPLLVG 970 (1354)
T ss_pred hhccCcchhHHHHHhhhcccccceeehhhc-ccCCccccccccchhhhcCCCchhhcCcchhhcCccc-ccccCcceeee
Confidence 000000000000000000000 0000 00000000 00 00001111111 23444455567
Q ss_pred EEEecCHHHHHHHHHHHHHcCCEEEEeCCCccc--hhhhhhCCcceeecCCc----------------------------
Q psy6090 324 IFARMSSDQKQQLVLELQQLGYYVAMCGDGAND--CGALRAAHAGISLSEAE---------------------------- 373 (674)
Q Consensus 324 VfaR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND--~~aLk~AdvGIams~ae---------------------------- 373 (674)
.|..++|+.-.++|+.+|++|++|++.|..+|- .-.+-+||++|++..-+
T Consensus 971 LFTDcnpeamcEMIeIMQE~GEVtcclGS~aN~rNSciflkadISialD~l~~~~C~~e~fg~assismaqandglsplQ 1050 (1354)
T KOG4383|consen 971 LFTDCNPEAMCEMIEIMQENGEVTCCLGSCANARNSCIFLKADISIALDDLEEPACRLEDFGVASSISMAQANDGLSPLQ 1050 (1354)
T ss_pred eccCCCHHHHHHHHHHHHHcCcEEEEeccccccccceEEEccceeEEeccCCCccceecccccchhhhhhhhcCCCCcee
Confidence 899999999999999999999999999999883 44557899999986421
Q ss_pred -----cccccCccccccchhHHHHHHHHhhHHHHHHHHHHHHHHH----HHHHHHHHHHHHHhhcCCCchhHHHHHHHHH
Q psy6090 374 -----SSVASPFTSTVANISCVLRIIREGRAALVTSFGIFKFMVL----YSLCEFFSTMILYTIDSNLTDFEFLYIDIAL 444 (674)
Q Consensus 374 -----asvAAdf~s~~~~i~~V~~~I~eGR~~l~ts~~~~k~~~~----~~l~~~~~~~~l~~~~~~l~~~q~L~idl~~ 444 (674)
.+++.||+......-.+..+|..+|.+......+|-|+.. |++++|.+ .++..+..++-.+.+|...+.
T Consensus 1051 iSgqLnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfLFiLq~qL~l~Vi~flS--c~~~LP~i~s~sdii~lScfc 1128 (1354)
T KOG4383|consen 1051 ISGQLNALACDFRFDHEELIKIIRLIECARHAMSGFRHCFLFILQAQLLLSVIIFLS--CFFFLPIIFSHSDIILLSCFC 1128 (1354)
T ss_pred ecccccccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHH--HHHhccchhccchHHHHHHHH
Confidence 1123455555556667888999999998776677777643 44444443 355678889999999999988
Q ss_pred HHHHHHH--HccCCCCCCCCcCCCCCC-Cccc----hHHHHHHHHHHHHHHHHHHHHHHHH
Q psy6090 445 VVNFAFF--FGRNHAFSGPLTSETPLN-SLFS----YVTLLSMFFQLILMVSMQIISFIIV 498 (674)
Q Consensus 445 ~~~~~~~--l~~~~p~~~~L~~~~P~~-~l~s----~~~~~si~~q~~i~~~~~~~~~~~~ 498 (674)
+.++.+. ++..++.. .+....|.. +-+- .+.+...++++...+....+.|.++
T Consensus 1129 ~PlL~i~tL~gk~~hkS-ii~maagKNlqeIPKk~kh~fllcFilkFsls~ssclIcFgf~ 1188 (1354)
T KOG4383|consen 1129 IPLLFIGTLFGKFEHKS-IIIMAAGKNLQEIPKKEKHKFLLCFILKFSLSASSCLICFGFL 1188 (1354)
T ss_pred HHHHHHHHHhcCCCccc-eEEeeccCChhhcccHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 8777665 33333333 333333321 1111 2234445555555555444444333
No 37
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=99.33 E-value=8.6e-12 Score=110.13 Aligned_cols=114 Identities=28% Similarity=0.365 Sum_probs=97.5
Q ss_pred eeeeeehhccCCCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCCCCCCCeEEEEeCCCCCCCCCCceEEEEcCc
Q psy6090 190 EFLGLIILENRLKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKECGIIDPGETVVDVSAVPGGLKECPKVYFTVSGV 269 (674)
Q Consensus 190 ~flGli~~en~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~gi~~~~~~vi~~~~~~~~~~~~~~i~~~~~~~ 269 (674)
...+.+.---+|-++++++|++|++- ++++++|||..-+....|+-.||...
T Consensus 20 ~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~--------------------------- 71 (152)
T COG4087 20 KVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVE--------------------------- 71 (152)
T ss_pred eEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCcee---------------------------
Confidence 45667777778899999999999999 99999999999999999999997310
Q ss_pred chhhhhhhhccCCchhhhhccCCCCeEEEEcchhHHHHHhhCchhHHHHHhhccEEEecCHHHHHHHHHHHHHcCCEEEE
Q psy6090 270 SAIQTKAKKLNYSKTEEELGLSSGAYKFAVTGKSWELIRDQMPELIPRIIVKGAIFARMSSDQKQQLVLELQQLGYYVAM 349 (674)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~itG~~~~~i~~~~~~~~~~i~~~~~VfaR~sP~qK~~iV~~lq~~g~~V~m 349 (674)
.+||-..|+.|..+++.|++.++.|.|
T Consensus 72 -----------------------------------------------------rv~a~a~~e~K~~ii~eLkk~~~k~vm 98 (152)
T COG4087 72 -----------------------------------------------------RVFAGADPEMKAKIIRELKKRYEKVVM 98 (152)
T ss_pred -----------------------------------------------------eeecccCHHHHHHHHHHhcCCCcEEEE
Confidence 477888899999999999999999999
Q ss_pred eCCCccchhhhhhCCcceeecCCccc-----cccCccccc
Q psy6090 350 CGDGANDCGALRAAHAGISLSEAESS-----VASPFTSTV 384 (674)
Q Consensus 350 ~GDG~ND~~aLk~AdvGIams~aeas-----vAAdf~s~~ 384 (674)
+|||+||..||+.||+||..-+.|.- .+||++.++
T Consensus 99 VGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~ 138 (152)
T COG4087 99 VGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKE 138 (152)
T ss_pred ecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhh
Confidence 99999999999999999986554321 268877653
No 38
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=99.32 E-value=9.5e-12 Score=128.98 Aligned_cols=197 Identities=18% Similarity=0.236 Sum_probs=119.7
Q ss_pred eeehhccC-CCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCCCCCCCeEEEEeCCCCCCCCCCceEEEEcCcch
Q psy6090 193 GLIILENR-LKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKECGIIDPGETVVDVSAVPGGLKECPKVYFTVSGVSA 271 (674)
Q Consensus 193 Gli~~en~-lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~gi~~~~~~vi~~~~~~~~~~~~~~i~~~~~~~~~ 271 (674)
|.+.-.+. +.+.+.++|+++++.|++++++|||+...+..+.+++++.. .++..++...... ..+.+...-...
T Consensus 12 GTLl~~~~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~---~~I~~NGa~i~~~--~~~i~~~~l~~~ 86 (264)
T COG0561 12 GTLLDSNKTISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDG---PLITFNGALIYNG--GELLFQKPLSRE 86 (264)
T ss_pred CCccCCCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCc---cEEEeCCeEEecC--CcEEeeecCCHH
Confidence 44444555 89999999999999999999999999999999999999954 6666665433322 112221111111
Q ss_pred hhhh-hhhcc---C------C--------chh------------------hhhccCCCCeEEEEcchhHHHHHhhCchhH
Q psy6090 272 IQTK-AKKLN---Y------S--------KTE------------------EELGLSSGAYKFAVTGKSWELIRDQMPELI 315 (674)
Q Consensus 272 ~~~~-~~~~~---~------~--------~~~------------------~~~~~~~~~~~l~itG~~~~~i~~~~~~~~ 315 (674)
.... ..... . . ... .+.........+....+....+.+...+.+
T Consensus 87 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 166 (264)
T COG0561 87 DVEELLELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRF 166 (264)
T ss_pred HHHHHHHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhc
Confidence 1110 00000 0 0 000 000000000011111222222221111111
Q ss_pred HHHHhhccEEEecCH-------H--HHHHHHHHHHH-cCC---EEEEeCCCccchhhhhhCCcceeecCCcccc--ccCc
Q psy6090 316 PRIIVKGAIFARMSS-------D--QKQQLVLELQQ-LGY---YVAMCGDGANDCGALRAAHAGISLSEAESSV--ASPF 380 (674)
Q Consensus 316 ~~i~~~~~VfaR~sP-------~--qK~~iV~~lq~-~g~---~V~m~GDG~ND~~aLk~AdvGIams~aeasv--AAdf 380 (674)
. .....+.+..+ . +|+..++.+.+ +|. .|++||||.||.+||+.|+.||||+|+...+ +|++
T Consensus 167 ~---~~~~~~~~s~~~~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~Na~~~~k~~A~~ 243 (264)
T COG0561 167 P---DLGLTVSSSGPISLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNADEELKELADY 243 (264)
T ss_pred c---ccceEEEEcCCceEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccCCCHHHHhhCCc
Confidence 0 11223333333 2 69999998877 464 4999999999999999999999999997766 7899
Q ss_pred cccccchhHHHHHHHHh
Q psy6090 381 TSTVANISCVLRIIREG 397 (674)
Q Consensus 381 ~s~~~~i~~V~~~I~eG 397 (674)
++.+++.++|.++|++-
T Consensus 244 vt~~n~~~Gv~~~l~~~ 260 (264)
T COG0561 244 VTTSNDEDGVAEALEKL 260 (264)
T ss_pred ccCCccchHHHHHHHHH
Confidence 99999999999999753
No 39
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=99.30 E-value=1.9e-11 Score=127.07 Aligned_cols=194 Identities=18% Similarity=0.153 Sum_probs=113.9
Q ss_pred cCCCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCCCCCCCeEEEEeCCCCCCCCCCceEEEEcCcchhhhhh-h
Q psy6090 199 NRLKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKECGIIDPGETVVDVSAVPGGLKECPKVYFTVSGVSAIQTKA-K 277 (674)
Q Consensus 199 n~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~gi~~~~~~vi~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~ 277 (674)
.++.+.+.++|++|+++|++++++|||+...+..+++++|+..+...++..++.-........+.+...-........ .
T Consensus 19 ~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~I~~NGa~i~~~~~~~~i~~~~l~~~~~~~i~~ 98 (270)
T PRK10513 19 HTISPAVKQAIAAARAKGVNVVLTTGRPYAGVHRYLKELHMEQPGDYCITNNGALVQKAADGETVAQTALSYDDYLYLEK 98 (270)
T ss_pred CccCHHHHHHHHHHHHCCCEEEEecCCChHHHHHHHHHhCCCCCCCeEEEcCCeEEEECCCCCEEEecCCCHHHHHHHHH
Confidence 358899999999999999999999999999999999999985433455555543221100011111111100000000 0
Q ss_pred ---h--c---------------------------c-CCc--hhh-hhccCCCCeEEEEcc--hhHHHHHhhCchhHHHHH
Q psy6090 278 ---K--L---------------------------N-YSK--TEE-ELGLSSGAYKFAVTG--KSWELIRDQMPELIPRII 319 (674)
Q Consensus 278 ---~--~---------------------------~-~~~--~~~-~~~~~~~~~~l~itG--~~~~~i~~~~~~~~~~i~ 319 (674)
. + . ... ... .......-..+.+-+ +.++.+.+. +....
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~----~~~~~ 174 (270)
T PRK10513 99 LSREVGVHFHALDRNTLYTANRDISYYTVHESFLTGIPLVFREVEKMDPNLQFPKVMMIDEPEILDAAIAR----IPAEV 174 (270)
T ss_pred HHHHcCCcEEEEECCEEEEecCCcchhHHHhhhhccCCccccchhhccccCCceEEEEeCCHHHHHHHHHH----hHHHh
Confidence 0 0 0 000 000 000000011111111 111111111 11111
Q ss_pred -hhccE------EEecCH--HHHHHHHHHHHHc-C---CEEEEeCCCccchhhhhhCCcceeecCCcccc--ccCccccc
Q psy6090 320 -VKGAI------FARMSS--DQKQQLVLELQQL-G---YYVAMCGDGANDCGALRAAHAGISLSEAESSV--ASPFTSTV 384 (674)
Q Consensus 320 -~~~~V------faR~sP--~qK~~iV~~lq~~-g---~~V~m~GDG~ND~~aLk~AdvGIams~aeasv--AAdf~s~~ 384 (674)
....+ +....| ..|...++.+.+. | ..|+++|||.||.+||+.|+.||||+||...+ +|++++.+
T Consensus 175 ~~~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~vt~~ 254 (270)
T PRK10513 175 KERYTVLKSAPYFLEILDKRVNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMGNAIPSVKEVAQFVTKS 254 (270)
T ss_pred cCcEEEEEecCeeEEEeCCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEecCccHHHHHhcCeeccC
Confidence 11111 222333 3699999988764 4 57999999999999999999999999999888 79999999
Q ss_pred cchhHHHHHHHH
Q psy6090 385 ANISCVLRIIRE 396 (674)
Q Consensus 385 ~~i~~V~~~I~e 396 (674)
++.++|.++|++
T Consensus 255 n~~dGva~~i~~ 266 (270)
T PRK10513 255 NLEDGVAFAIEK 266 (270)
T ss_pred CCcchHHHHHHH
Confidence 999999998864
No 40
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=99.25 E-value=4.5e-11 Score=124.47 Aligned_cols=190 Identities=12% Similarity=0.107 Sum_probs=111.2
Q ss_pred cCCCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCCCCCCCeEEEEeCCCCCCCCCCceEEEEcCcchhhhhhhh
Q psy6090 199 NRLKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKECGIIDPGETVVDVSAVPGGLKECPKVYFTVSGVSAIQTKAKK 278 (674)
Q Consensus 199 n~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~gi~~~~~~vi~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 278 (674)
..+.+.+.++|++|+++|++++++|||+...+..+.+++|+. ..++..++.-..+.....+.-...+..........
T Consensus 18 ~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~---~~~I~~NGa~I~~~~~~~l~~~~i~~~~~~~i~~~ 94 (272)
T PRK15126 18 HHLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLD---AYLITGNGTRVHSLEGELLHRQDLPADVAELVLHQ 94 (272)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCC---CcEEecCCcEEEcCCCCEEEeecCCHHHHHHHHHH
Confidence 358999999999999999999999999999999999999984 23454444322111111111111111100000000
Q ss_pred c---c------------------------------CCchhhhhccCCCCeEEEEcch--hHHHHHhhCchhHHHHHh-hc
Q psy6090 279 L---N------------------------------YSKTEEELGLSSGAYKFAVTGK--SWELIRDQMPELIPRIIV-KG 322 (674)
Q Consensus 279 ~---~------------------------------~~~~~~~~~~~~~~~~l~itG~--~~~~i~~~~~~~~~~i~~-~~ 322 (674)
. + ......+.......+.+.+.++ ..+.+.+ .+.+.+. ..
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~----~l~~~~~~~~ 170 (272)
T PRK15126 95 QWDTRASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCGDHDDLTRLQI----QLNEALGERA 170 (272)
T ss_pred hhhcCcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEECCHHHHHHHHH----HHHHHhcCCE
Confidence 0 0 0000000000011122222221 1121111 1111111 11
Q ss_pred cE------EEecCHH--HHHHHHHHHHHc-C---CEEEEeCCCccchhhhhhCCcceeecCCcccc--ccCc--cccccc
Q psy6090 323 AI------FARMSSD--QKQQLVLELQQL-G---YYVAMCGDGANDCGALRAAHAGISLSEAESSV--ASPF--TSTVAN 386 (674)
Q Consensus 323 ~V------faR~sP~--qK~~iV~~lq~~-g---~~V~m~GDG~ND~~aLk~AdvGIams~aeasv--AAdf--~s~~~~ 386 (674)
.+ +....|. .|...++.+.+. | ..|+++|||.||.+||+.|+.||||+||...+ +|++ ++.+++
T Consensus 171 ~~~~s~~~~~eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~Na~~~vK~~A~~~~v~~~n~ 250 (272)
T PRK15126 171 HLCFSATDCLEVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMGNAMPQLRAELPHLPVIGHCR 250 (272)
T ss_pred EEEEcCCcEEEeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceeccCChHHHHHhCCCCeecCCCc
Confidence 11 2234444 699999999774 4 57999999999999999999999999999888 5776 677889
Q ss_pred hhHHHHHHH
Q psy6090 387 ISCVLRIIR 395 (674)
Q Consensus 387 i~~V~~~I~ 395 (674)
.++|.++|+
T Consensus 251 edGva~~l~ 259 (272)
T PRK15126 251 NQAVSHYLT 259 (272)
T ss_pred chHHHHHHH
Confidence 999999886
No 41
>PRK10976 putative hydrolase; Provisional
Probab=99.25 E-value=5.3e-11 Score=123.47 Aligned_cols=65 Identities=22% Similarity=0.235 Sum_probs=57.2
Q ss_pred HHHHHHHHHHHc-C---CEEEEeCCCccchhhhhhCCcceeecCCcccc--ccC--ccccccchhHHHHHHHH
Q psy6090 332 QKQQLVLELQQL-G---YYVAMCGDGANDCGALRAAHAGISLSEAESSV--ASP--FTSTVANISCVLRIIRE 396 (674)
Q Consensus 332 qK~~iV~~lq~~-g---~~V~m~GDG~ND~~aLk~AdvGIams~aeasv--AAd--f~s~~~~i~~V~~~I~e 396 (674)
.|...++.+.+. | ..|+++|||.||.+||+.|+.||||+||...+ +|+ +++.+++.++|.++|++
T Consensus 190 sKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~~~v~~~n~edGVa~~l~~ 262 (266)
T PRK10976 190 SKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGNAHQRLKDLLPELEVIGSNADDAVPHYLRK 262 (266)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecCCcHHHHHhCCCCeecccCchHHHHHHHHH
Confidence 699999988764 4 57999999999999999999999999999888 565 77889999999998864
No 42
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=99.23 E-value=2.2e-11 Score=122.30 Aligned_cols=188 Identities=15% Similarity=0.184 Sum_probs=110.6
Q ss_pred cCCCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCCCCCCCeEEEEeCCCCCCCCCCceEEEEcCcchhhhhhhh
Q psy6090 199 NRLKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKECGIIDPGETVVDVSAVPGGLKECPKVYFTVSGVSAIQTKAKK 278 (674)
Q Consensus 199 n~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~gi~~~~~~vi~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 278 (674)
.++.+++.++|++|+++|++++++|||+...+..+++.+++. ..++..++.-..... ..+.+..............
T Consensus 17 ~~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~---~~~i~~NGa~i~~~~-~~~~~~~~~~~~~~~~~~~ 92 (215)
T TIGR01487 17 RMISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTS---GPVVAENGGVIFYNK-EDIFLANMEEEWFLDEEKK 92 (215)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCC---CcEEEccCcEEEeCC-CcEEEecccchhhHHHhhh
Confidence 348899999999999999999999999999999999999874 234544432221111 1122221111100000000
Q ss_pred ccCCchhhhhccCCCCeEEEEcchhHHHHHhhCchhHHHHHhhc---cEEEecCH--HHHHHHHHHHHHc-C---CEEEE
Q psy6090 279 LNYSKTEEELGLSSGAYKFAVTGKSWELIRDQMPELIPRIIVKG---AIFARMSS--DQKQQLVLELQQL-G---YYVAM 349 (674)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~l~itG~~~~~i~~~~~~~~~~i~~~~---~VfaR~sP--~qK~~iV~~lq~~-g---~~V~m 349 (674)
..................+..+++..+.+.+. +...-... ..+....| ..|...++.+.+. | ..+++
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~ 168 (215)
T TIGR01487 93 KRFPRDRLSNEYPRASLVIMREGKDVDEVREI----IKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAA 168 (215)
T ss_pred hhhhhhhcccccceeEEEEecCCccHHHHHHH----HHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEE
Confidence 00000000000000112222334333333221 11100000 01222333 4799999888764 4 36999
Q ss_pred eCCCccchhhhhhCCcceeecCCcccc--ccCccccccchhHHHHHH
Q psy6090 350 CGDGANDCGALRAAHAGISLSEAESSV--ASPFTSTVANISCVLRII 394 (674)
Q Consensus 350 ~GDG~ND~~aLk~AdvGIams~aeasv--AAdf~s~~~~i~~V~~~I 394 (674)
+||+.||.+|++.|+.|++|+|+...+ +|++++.+++.++|.++|
T Consensus 169 iGDs~ND~~ml~~ag~~vam~na~~~~k~~A~~v~~~~~~~Gv~~~l 215 (215)
T TIGR01487 169 IGDSENDIDLFRVVGFKVAVANADDQLKEIADYVTSNPYGEGVVEVL 215 (215)
T ss_pred ECCCHHHHHHHHhCCCeEEcCCccHHHHHhCCEEcCCCCCchhhhhC
Confidence 999999999999999999999998888 689999988988988754
No 43
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=99.18 E-value=6.5e-11 Score=119.97 Aligned_cols=196 Identities=19% Similarity=0.199 Sum_probs=114.1
Q ss_pred eeehhccC-CCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCCCCCCCeEEEEeCCCCCCCCCCceEEEEcCcch
Q psy6090 193 GLIILENR-LKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKECGIIDPGETVVDVSAVPGGLKECPKVYFTVSGVSA 271 (674)
Q Consensus 193 Gli~~en~-lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~gi~~~~~~vi~~~~~~~~~~~~~~i~~~~~~~~~ 271 (674)
|.+.-.++ +.+.+.++|++|+++|++++++|||+...+..+++++|+. ..++..++............+...-. .
T Consensus 12 GTLl~~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~---~~~i~~nGa~i~~~~~~~~~~~~~~~-~ 87 (230)
T PRK01158 12 GTITDKDRRLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTS---GPVIAENGGVISVGFDGKRIFLGDIE-E 87 (230)
T ss_pred CCcCCCCCccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCC---CcEEEecCeEEEEcCCCCEEEEcchH-H
Confidence 44443444 7899999999999999999999999999999999999974 34555554322111001111111111 0
Q ss_pred hhhhhhhcc--CCchh---hhhccCCCCeEEE-EcchhHHHHHhhCchhHHHHHhhcc-----EEEecCHH--HHHHHHH
Q psy6090 272 IQTKAKKLN--YSKTE---EELGLSSGAYKFA-VTGKSWELIRDQMPELIPRIIVKGA-----IFARMSSD--QKQQLVL 338 (674)
Q Consensus 272 ~~~~~~~~~--~~~~~---~~~~~~~~~~~l~-itG~~~~~i~~~~~~~~~~i~~~~~-----VfaR~sP~--qK~~iV~ 338 (674)
......... ..... ...........+. .+....+.+.+ .+.+.-.... .+....|. .|...++
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~ 163 (230)
T PRK01158 88 CEKAYSELKKRFPEASTSLTKLDPDYRKTEVALRRTVPVEEVRE----LLEELGLDLEIVDSGFAIHIKSPGVNKGTGLK 163 (230)
T ss_pred HHHHHHHHHHhccccceeeecCCcccccceeeecccccHHHHHH----HHHHcCCcEEEEecceEEEEeeCCCChHHHHH
Confidence 000000000 00000 0000000000111 11211111111 1111100111 12344444 4888888
Q ss_pred HHHHc-C---CEEEEeCCCccchhhhhhCCcceeecCCcccc--ccCccccccchhHHHHHHHH
Q psy6090 339 ELQQL-G---YYVAMCGDGANDCGALRAAHAGISLSEAESSV--ASPFTSTVANISCVLRIIRE 396 (674)
Q Consensus 339 ~lq~~-g---~~V~m~GDG~ND~~aLk~AdvGIams~aeasv--AAdf~s~~~~i~~V~~~I~e 396 (674)
.+.+. | ..++++|||.||.+|++.|+.|++|+|+...+ +|++++.+++.++|.++|++
T Consensus 164 ~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~vam~Na~~~vk~~a~~v~~~n~~~Gv~~~l~~ 227 (230)
T PRK01158 164 KLAELMGIDPEEVAAIGDSENDLEMFEVAGFGVAVANADEELKEAADYVTEKSYGEGVAEAIEH 227 (230)
T ss_pred HHHHHhCCCHHHEEEECCchhhHHHHHhcCceEEecCccHHHHHhcceEecCCCcChHHHHHHH
Confidence 88764 3 46999999999999999999999999999888 68999999999999998863
No 44
>PLN02887 hydrolase family protein
Probab=99.18 E-value=1.5e-10 Score=131.08 Aligned_cols=65 Identities=25% Similarity=0.256 Sum_probs=58.9
Q ss_pred HHHHHHHHHHHc-C---CEEEEeCCCccchhhhhhCCcceeecCCcccc--ccCccccccchhHHHHHHHH
Q psy6090 332 QKQQLVLELQQL-G---YYVAMCGDGANDCGALRAAHAGISLSEAESSV--ASPFTSTVANISCVLRIIRE 396 (674)
Q Consensus 332 qK~~iV~~lq~~-g---~~V~m~GDG~ND~~aLk~AdvGIams~aeasv--AAdf~s~~~~i~~V~~~I~e 396 (674)
.|...++.+.+. | ..|++||||.||.+||+.|+.||||+||...+ +|++++.+++.++|.++|++
T Consensus 507 SKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMgNA~eeVK~~Ad~VT~sNdEDGVA~aLek 577 (580)
T PLN02887 507 SKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALSNGAEKTKAVADVIGVSNDEDGVADAIYR 577 (580)
T ss_pred CHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeCCCCHHHHHhCCEEeCCCCcCHHHHHHHH
Confidence 699999888764 4 47999999999999999999999999999888 69999999999999999874
No 45
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=99.15 E-value=2e-10 Score=115.94 Aligned_cols=191 Identities=15% Similarity=0.151 Sum_probs=109.1
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCCCCCCCeEEEEeCCCCCCCCCCceEEEE-cCcchhhhhhhh
Q psy6090 200 RLKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKECGIIDPGETVVDVSAVPGGLKECPKVYFTV-SGVSAIQTKAKK 278 (674)
Q Consensus 200 ~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~gi~~~~~~vi~~~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~ 278 (674)
.+.+.+.++|++|+++||+++++|||+...+..+++++|+. ..++..++............|.. .+..........
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~---~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTP---DPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIA 91 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCC---CeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHh
Confidence 47889999999999999999999999999999999999953 34555554321111101112221 111100000000
Q ss_pred ccCCchhhh--hccCCCCeEEEEcch--hHHHHHhhCchhHHHHHhhccEEEecCH--HHHHHHHHHHHHc-C---CEEE
Q psy6090 279 LNYSKTEEE--LGLSSGAYKFAVTGK--SWELIRDQMPELIPRIIVKGAIFARMSS--DQKQQLVLELQQL-G---YYVA 348 (674)
Q Consensus 279 ~~~~~~~~~--~~~~~~~~~l~itG~--~~~~i~~~~~~~~~~i~~~~~VfaR~sP--~qK~~iV~~lq~~-g---~~V~ 348 (674)
......... .......+.+....+ ....+.++....+. . .....+....| ..|...++.+.+. | ..|+
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i 169 (225)
T TIGR01482 92 KTFPFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLV-A-VDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETL 169 (225)
T ss_pred cccchhhhccccccccceEEEeecCCHHHHHHHHHhcCceEE-E-ecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEE
Confidence 000000000 000001111121111 11111111110000 0 00011223333 3788888888664 4 5799
Q ss_pred EeCCCccchhhhhhCCcceeecCCcccc--ccCccccccchhH----HHHHHH
Q psy6090 349 MCGDGANDCGALRAAHAGISLSEAESSV--ASPFTSTVANISC----VLRIIR 395 (674)
Q Consensus 349 m~GDG~ND~~aLk~AdvGIams~aeasv--AAdf~s~~~~i~~----V~~~I~ 395 (674)
++||+.||.+|++.|++|++|+|+...+ +|++++.+++.++ |.++|+
T Consensus 170 ~~GD~~NDi~m~~~ag~~vam~Na~~~~k~~A~~vt~~~~~~G~~~~v~~~l~ 222 (225)
T TIGR01482 170 VCGDSENDIDLFEVPGFGVAVANAQPELKEWADYVTESPYGEGGAEAIGEILQ 222 (225)
T ss_pred EECCCHhhHHHHHhcCceEEcCChhHHHHHhcCeecCCCCCCcHHHHHHHHHH
Confidence 9999999999999999999999998887 6999999889889 777765
No 46
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=99.12 E-value=3.5e-10 Score=117.58 Aligned_cols=65 Identities=22% Similarity=0.293 Sum_probs=56.6
Q ss_pred HHHHHHHHHHH-cC---CEEEEeCCCccchhhhhhCCcceeecCCcccc--ccCccccccchhHHHHHHHH
Q psy6090 332 QKQQLVLELQQ-LG---YYVAMCGDGANDCGALRAAHAGISLSEAESSV--ASPFTSTVANISCVLRIIRE 396 (674)
Q Consensus 332 qK~~iV~~lq~-~g---~~V~m~GDG~ND~~aLk~AdvGIams~aeasv--AAdf~s~~~~i~~V~~~I~e 396 (674)
.|...++.+.+ .| ..|+++||+.||.+|++.|++|++|+|+...+ +|++++.+++.++|.++|++
T Consensus 199 ~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamgna~~~lk~~Ad~v~~~n~~dGv~~~l~~ 269 (272)
T PRK10530 199 SKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMGNADDAVKARADLVIGDNTTPSIAEFIYS 269 (272)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEecCchHHHHHhCCEEEecCCCCcHHHHHHH
Confidence 58888887755 34 47999999999999999999999999988777 68999999999999998863
No 47
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=99.11 E-value=1.8e-10 Score=117.30 Aligned_cols=189 Identities=20% Similarity=0.269 Sum_probs=114.7
Q ss_pred ccCCCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCCCCCCCeEEEEeCCCCCCCCCCceEEEEcCcchhhhh-h
Q psy6090 198 ENRLKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKECGIIDPGETVVDVSAVPGGLKECPKVYFTVSGVSAIQTK-A 276 (674)
Q Consensus 198 en~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~gi~~~~~~vi~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~ 276 (674)
..++.+++.++|++|+++|++++++|||+...+..+.+++++. ..+|..++.-.. .......+...-....... .
T Consensus 13 ~~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~---~~~I~~nGa~i~-~~~~~~l~~~~i~~~~~~~i~ 88 (254)
T PF08282_consen 13 DGKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGID---DYFICSNGALID-DPKGKILYEKPIDSDDVKKIL 88 (254)
T ss_dssp TSSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHC---SEEEEGGGTEEE-ETTTEEEEEESB-HHHHHHHH
T ss_pred CCeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccch---hhhcccccceee-ecccccchhhheeccchhhee
Confidence 4558899999999999999999999999999999999999985 566666654431 1111222111111111000 0
Q ss_pred h-----hccC-----------Cc-------------------hhhhhccCCCCeE--EEEcchhHHHHHhhCchhHHHHH
Q psy6090 277 K-----KLNY-----------SK-------------------TEEELGLSSGAYK--FAVTGKSWELIRDQMPELIPRII 319 (674)
Q Consensus 277 ~-----~~~~-----------~~-------------------~~~~~~~~~~~~~--l~itG~~~~~i~~~~~~~~~~i~ 319 (674)
. .+.. .. ...+......... +..+.+.+..+.+...+.+..
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~-- 166 (254)
T PF08282_consen 89 KYLKEHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPN-- 166 (254)
T ss_dssp HHHHHTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTT--
T ss_pred ehhhhcccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCc--
Confidence 0 0000 00 0000001111112 222233333333322222211
Q ss_pred hhccEEEe-------cCH--HHHHHHHHHHHHc-C---CEEEEeCCCccchhhhhhCCcceeecCCcccc--ccCccccc
Q psy6090 320 VKGAIFAR-------MSS--DQKQQLVLELQQL-G---YYVAMCGDGANDCGALRAAHAGISLSEAESSV--ASPFTSTV 384 (674)
Q Consensus 320 ~~~~VfaR-------~sP--~qK~~iV~~lq~~-g---~~V~m~GDG~ND~~aLk~AdvGIams~aeasv--AAdf~s~~ 384 (674)
...+.+ .+| ..|...++.+.+. | ..++++||+.||.+||+.|+.|+||+|+...+ +|++++..
T Consensus 167 --~~~~~~~~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~na~~~~k~~a~~i~~~ 244 (254)
T PF08282_consen 167 --LIDVVRSSPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMGNATPELKKAADYITPS 244 (254)
T ss_dssp --TEEEEEEETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEETTS-HHHHHHSSEEESS
T ss_pred --ceeEEEecccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEcCCCHHHHHhCCEEecC
Confidence 112222 333 3699999888763 3 58999999999999999999999999999888 79999988
Q ss_pred cchhHHHHHH
Q psy6090 385 ANISCVLRII 394 (674)
Q Consensus 385 ~~i~~V~~~I 394 (674)
.+-++|.++|
T Consensus 245 ~~~~gv~~~i 254 (254)
T PF08282_consen 245 NNDDGVAKAI 254 (254)
T ss_dssp GTCTHHHHHH
T ss_pred CCCChHHHhC
Confidence 8889998875
No 48
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=99.00 E-value=2.3e-09 Score=110.66 Aligned_cols=65 Identities=15% Similarity=0.180 Sum_probs=53.8
Q ss_pred HHHHHHHHHHHc------CCEEEEeCCCccchhhhhhCCcceeecCCcc---cc-c---cC-ccccccchhHHHHHHHH
Q psy6090 332 QKQQLVLELQQL------GYYVAMCGDGANDCGALRAAHAGISLSEAES---SV-A---SP-FTSTVANISCVLRIIRE 396 (674)
Q Consensus 332 qK~~iV~~lq~~------g~~V~m~GDG~ND~~aLk~AdvGIams~aea---sv-A---Ad-f~s~~~~i~~V~~~I~e 396 (674)
.|...++.+.+. ...|+++||+.||.+||+.|+.||||+|+.. .+ + |+ +++.+++-++|.++|++
T Consensus 176 ~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~~ 254 (256)
T TIGR01486 176 DKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGPNGPNVSLKPGDPGSFLLTPAPGPEGWREALEH 254 (256)
T ss_pred CHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCCCCCccccCccCCCcEEEcCCCCcHHHHHHHHH
Confidence 687777777553 3569999999999999999999999999973 45 3 34 89999999999998864
No 49
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.97 E-value=4.1e-09 Score=109.74 Aligned_cols=195 Identities=11% Similarity=0.081 Sum_probs=109.0
Q ss_pred eeehhccC-CCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCCCCCCCeEEEEeCCCCCCC---C--CCceEEE-
Q psy6090 193 GLIILENR-LKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKECGIIDPGETVVDVSAVPGGLK---E--CPKVYFT- 265 (674)
Q Consensus 193 Gli~~en~-lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~gi~~~~~~vi~~~~~~~~~~---~--~~~i~~~- 265 (674)
|.+.-.+. +.+.+.++|++|+++||+++++|||....+..+++++|+.. .++|..++...-.. . .....+.
T Consensus 16 GTLL~~~~~i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~~--~~~I~~NGa~I~~~~~~~~~~~~~~~~~ 93 (271)
T PRK03669 16 GTLLDSHTYDWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQG--LPLIAENGAVIQLDEQWQDHPDFPRIIS 93 (271)
T ss_pred cCCcCCCCcCcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCCC--CcEEEeCCCEEEecCcccCCCCceEeec
Confidence 44443333 55789999999999999999999999999999999999832 34555554322110 0 0000111
Q ss_pred EcCcchhhhhhhh---c-cC------C--c-----------hhhhh-ccCCCCeEEEEcch--hHHHHHhhCchhHHHHH
Q psy6090 266 VSGVSAIQTKAKK---L-NY------S--K-----------TEEEL-GLSSGAYKFAVTGK--SWELIRDQMPELIPRII 319 (674)
Q Consensus 266 ~~~~~~~~~~~~~---~-~~------~--~-----------~~~~~-~~~~~~~~l~itG~--~~~~i~~~~~~~~~~i~ 319 (674)
..+.......... . .. . . ..... ......+.+.+.++ .+..+.+ .+...
T Consensus 94 ~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~l~~~- 168 (271)
T PRK03669 94 GISHGEIRQVLNTLREKEGFKFTTFDDVDDATIAEWTGLSRSQAALARLHEASVTLIWRDSDERMAQFTA----RLAEL- 168 (271)
T ss_pred CCCHHHHHHHHHHHHHhcCCceeecccCCHHHHHHHhCCCHHHHHHHhccccCceeEecCCHHHHHHHHH----HHHHC-
Confidence 1111110000000 0 00 0 0 00000 00000111222221 1111111 11110
Q ss_pred hhccE-----EEecCH--HHHHHHHHHHHHc-C------CEEEEeCCCccchhhhhhCCcceeecCCccc------c--c
Q psy6090 320 VKGAI-----FARMSS--DQKQQLVLELQQL-G------YYVAMCGDGANDCGALRAAHAGISLSEAESS------V--A 377 (674)
Q Consensus 320 ~~~~V-----faR~sP--~qK~~iV~~lq~~-g------~~V~m~GDG~ND~~aLk~AdvGIams~aeas------v--A 377 (674)
...+ +-...| ..|...++.+.+. | ..|+++|||.||.+||+.|++||||+++.++ + .
T Consensus 169 -~~~~~~~~~~iEi~~~g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~~~~~~~~~l~~~~~~ 247 (271)
T PRK03669 169 -GLQFVQGARFWHVLDASAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVKGLNREGVHLQDDDPA 247 (271)
T ss_pred -CCEEEecCeeEEEecCCCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEecCCCCCCcccccccCC
Confidence 1111 223344 3698888888653 3 5799999999999999999999999976532 2 4
Q ss_pred cCccccccchhHHHHHHH
Q psy6090 378 SPFTSTVANISCVLRIIR 395 (674)
Q Consensus 378 Adf~s~~~~i~~V~~~I~ 395 (674)
|++++....-+++.++++
T Consensus 248 ~~~~~~~~~~~g~~~~l~ 265 (271)
T PRK03669 248 RVYRTQREGPEGWREGLD 265 (271)
T ss_pred ceEeccCCCcHHHHHHHH
Confidence 778999999999998886
No 50
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=98.89 E-value=4e-09 Score=108.79 Aligned_cols=63 Identities=25% Similarity=0.347 Sum_probs=55.3
Q ss_pred HHHHHHHHHHHc-C---CEEEEeCCCccchhhhhhCCcceeecCCcccc--ccCccccccchhHHHHHH
Q psy6090 332 QKQQLVLELQQL-G---YYVAMCGDGANDCGALRAAHAGISLSEAESSV--ASPFTSTVANISCVLRII 394 (674)
Q Consensus 332 qK~~iV~~lq~~-g---~~V~m~GDG~ND~~aLk~AdvGIams~aeasv--AAdf~s~~~~i~~V~~~I 394 (674)
.|...++.+.+. | ..++++||+.||.+|++.|+.|++|+++...+ +|++++.+++.++|.++|
T Consensus 188 ~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~na~~~~k~~a~~~~~~n~~dGV~~~l 256 (256)
T TIGR00099 188 SKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMGNADEELKALADYVTDSNNEDGVALAL 256 (256)
T ss_pred ChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEecCchHHHHHhCCEEecCCCCcchhhhC
Confidence 699999998774 3 47999999999999999999999999988777 689999999999987653
No 51
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.82 E-value=2.2e-08 Score=104.46 Aligned_cols=65 Identities=18% Similarity=0.135 Sum_probs=52.6
Q ss_pred HHHHHHHHHHHc----C-CEEEEeCCCccchhhhhhCCcceeecCCcccc------cc-Cccc--cccchhHHHHHHHH
Q psy6090 332 QKQQLVLELQQL----G-YYVAMCGDGANDCGALRAAHAGISLSEAESSV------AS-PFTS--TVANISCVLRIIRE 396 (674)
Q Consensus 332 qK~~iV~~lq~~----g-~~V~m~GDG~ND~~aLk~AdvGIams~aeasv------AA-df~s--~~~~i~~V~~~I~e 396 (674)
.|...++.+.+. . ..|+++|||.||.+|++.|++|++|+||.+.+ +| +.+. ..++-++|.++|++
T Consensus 190 ~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~~ 268 (273)
T PRK00192 190 DKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVPGPDGPNPPLLPGIADGEFILASAPGPEGWAEAINK 268 (273)
T ss_pred CHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeCCCCCCCcccCccccCCceEEecCCCcHHHHHHHHH
Confidence 788888777653 4 78999999999999999999999999987654 23 4555 67778899888863
No 52
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=98.76 E-value=4.9e-08 Score=97.01 Aligned_cols=130 Identities=21% Similarity=0.254 Sum_probs=95.1
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCCCCCCCeEEEEeCCCCCCCCCCceEEEEcCcchhhhhhhhc
Q psy6090 200 RLKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKECGIIDPGETVVDVSAVPGGLKECPKVYFTVSGVSAIQTKAKKL 279 (674)
Q Consensus 200 ~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~gi~~~~~~vi~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 279 (674)
++.|++.+.|+.|++.+ +++++||-....+..+++++|+.. ++..+ ...+
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~----~~an~-l~~~------------------------ 117 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPT----LLCHK-LEID------------------------ 117 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCch----hhcee-eEEe------------------------
Confidence 68999999999999975 999999999999999999999942 11100 0000
Q ss_pred cCCchhhhhccCCCCeEEEEcchhHHHHHhhCchhHHHHHhhccEEEecCHHHHHHHHHHHHHcCCEEEEeCCCccchhh
Q psy6090 280 NYSKTEEELGLSSGAYKFAVTGKSWELIRDQMPELIPRIIVKGAIFARMSSDQKQQLVLELQQLGYYVAMCGDGANDCGA 359 (674)
Q Consensus 280 ~~~~~~~~~~~~~~~~~l~itG~~~~~i~~~~~~~~~~i~~~~~VfaR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~a 359 (674)
+. =.++|.. + ..++.|...++.+++.|..+.|+|||.||.+|
T Consensus 118 -------------~~--g~~tG~~--------------------~---~~~~~K~~~l~~l~~~~~~~v~vGDs~nDl~m 159 (203)
T TIGR02137 118 -------------DS--DRVVGYQ--------------------L---RQKDPKRQSVIAFKSLYYRVIAAGDSYNDTTM 159 (203)
T ss_pred -------------cC--CeeECee--------------------e---cCcchHHHHHHHHHhhCCCEEEEeCCHHHHHH
Confidence 00 0122210 1 23568999999998888889999999999999
Q ss_pred hhhCCcceeecCCcccc-ccCccccccchhHHHHHHHHh
Q psy6090 360 LRAAHAGISLSEAESSV-ASPFTSTVANISCVLRIIREG 397 (674)
Q Consensus 360 Lk~AdvGIams~aeasv-AAdf~s~~~~i~~V~~~I~eG 397 (674)
++.||+||++...+.-. +||=..-..+.+.+..++.+.
T Consensus 160 l~~Ag~~ia~~ak~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (203)
T TIGR02137 160 LSEAHAGILFHAPENVIREFPQFPAVHTYEDLKREFLKA 198 (203)
T ss_pred HHhCCCCEEecCCHHHHHhCCCCCcccCHHHHHHHHHHH
Confidence 99999999999655444 466555555667777766654
No 53
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=98.74 E-value=3.9e-08 Score=104.32 Aligned_cols=131 Identities=24% Similarity=0.281 Sum_probs=96.2
Q ss_pred cCCCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCCCCCCCeEEEEeCCCCCCCCCCceEEEEcCcchhhhhhhh
Q psy6090 199 NRLKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKECGIIDPGETVVDVSAVPGGLKECPKVYFTVSGVSAIQTKAKK 278 (674)
Q Consensus 199 n~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~gi~~~~~~vi~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 278 (674)
-++.|++.+.|+.|+++|+++.++||.....+..+.+++|+.. ++. +..+ . .+
T Consensus 180 l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~----~~a-n~le----------i--~d---------- 232 (322)
T PRK11133 180 LPLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDA----AVA-NELE----------I--MD---------- 232 (322)
T ss_pred CCCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCe----EEE-eEEE----------E--EC----------
Confidence 4689999999999999999999999999888888999999842 111 0000 0 00
Q ss_pred ccCCchhhhhccCCCCeEEEEcchhHHHHHhhCchhHHHHHhhccEEEecCHHHHHHHHHHHHH-cC---CEEEEeCCCc
Q psy6090 279 LNYSKTEEELGLSSGAYKFAVTGKSWELIRDQMPELIPRIIVKGAIFARMSSDQKQQLVLELQQ-LG---YYVAMCGDGA 354 (674)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~l~itG~~~~~i~~~~~~~~~~i~~~~~VfaR~sP~qK~~iV~~lq~-~g---~~V~m~GDG~ 354 (674)
. .++|.... .+ +..+.|..+++.+.+ .| ..|.|+|||+
T Consensus 233 --------------g----~ltg~v~g-----------------~i---v~~k~K~~~L~~la~~lgi~~~qtIaVGDg~ 274 (322)
T PRK11133 233 --------------G----KLTGNVLG-----------------DI---VDAQYKADTLTRLAQEYEIPLAQTVAIGDGA 274 (322)
T ss_pred --------------C----EEEeEecC-----------------cc---CCcccHHHHHHHHHHHcCCChhhEEEEECCH
Confidence 0 11111100 00 123568888877765 34 5899999999
Q ss_pred cchhhhhhCCcceeecCCcccc--ccCccccccchhHHHHHHH
Q psy6090 355 NDCGALRAAHAGISLSEAESSV--ASPFTSTVANISCVLRIIR 395 (674)
Q Consensus 355 ND~~aLk~AdvGIams~aeasv--AAdf~s~~~~i~~V~~~I~ 395 (674)
||.+|++.||+||++ ++...| .|+......++++|..++-
T Consensus 275 NDl~m~~~AGlgiA~-nAkp~Vk~~Ad~~i~~~~l~~~l~~~~ 316 (322)
T PRK11133 275 NDLPMIKAAGLGIAY-HAKPKVNEQAQVTIRHADLMGVLCILS 316 (322)
T ss_pred HHHHHHHHCCCeEEe-CCCHHHHhhCCEEecCcCHHHHHHHhc
Confidence 999999999999999 888877 6999999999999887663
No 54
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.62 E-value=2.5e-07 Score=92.43 Aligned_cols=109 Identities=28% Similarity=0.356 Sum_probs=82.8
Q ss_pred cCCCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCCCCCCCeEEEEeCCCCCCCCCCceEEEEcCcchhhhhhhh
Q psy6090 199 NRLKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKECGIIDPGETVVDVSAVPGGLKECPKVYFTVSGVSAIQTKAKK 278 (674)
Q Consensus 199 n~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~gi~~~~~~vi~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 278 (674)
.++.|++.+.++.++++|++|+++||-...-+..+|+.+|+...-...+....
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~d--------------------------- 128 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDD--------------------------- 128 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeC---------------------------
Confidence 78999999999999999999999999999999999999999542222111110
Q ss_pred ccCCchhhhhccCCCCeEEEEcchhHHHHHhhCchhHHHHHhhccEEE-ecCHHHHHHHHHHHHH-cCC---EEEEeCCC
Q psy6090 279 LNYSKTEEELGLSSGAYKFAVTGKSWELIRDQMPELIPRIIVKGAIFA-RMSSDQKQQLVLELQQ-LGY---YVAMCGDG 353 (674)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~l~itG~~~~~i~~~~~~~~~~i~~~~~Vfa-R~sP~qK~~iV~~lq~-~g~---~V~m~GDG 353 (674)
. .++|. +.. .+..+.|...++.+.+ .|. .+.++|||
T Consensus 129 -----------------G-~ltG~---------------------v~g~~~~~~~K~~~l~~~~~~~g~~~~~~~a~gDs 169 (212)
T COG0560 129 -----------------G-KLTGR---------------------VVGPICDGEGKAKALRELAAELGIPLEETVAYGDS 169 (212)
T ss_pred -----------------C-EEece---------------------eeeeecCcchHHHHHHHHHHHcCCCHHHeEEEcCc
Confidence 0 23332 222 2344678888866554 565 59999999
Q ss_pred ccchhhhhhCCcceeecCCc
Q psy6090 354 ANDCGALRAAHAGISLSEAE 373 (674)
Q Consensus 354 ~ND~~aLk~AdvGIams~ae 373 (674)
+||.+||+.||.+|++....
T Consensus 170 ~nDlpml~~ag~~ia~n~~~ 189 (212)
T COG0560 170 ANDLPMLEAAGLPIAVNPKP 189 (212)
T ss_pred hhhHHHHHhCCCCeEeCcCH
Confidence 99999999999999998653
No 55
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=98.59 E-value=1.3e-07 Score=97.20 Aligned_cols=197 Identities=13% Similarity=0.163 Sum_probs=106.5
Q ss_pred ccCCCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCCCCCCCeEEEEeCCCCCCCC--CCceEEEEcCcch-hhh
Q psy6090 198 ENRLKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKECGIIDPGETVVDVSAVPGGLKE--CPKVYFTVSGVSA-IQT 274 (674)
Q Consensus 198 en~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~gi~~~~~~vi~~~~~~~~~~~--~~~i~~~~~~~~~-~~~ 274 (674)
..+..|.+.++|+++++.|+.++.+||+....+..+.++.++..+. .+|.-++...-... .....|....... ...
T Consensus 19 ~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~-~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~ 97 (249)
T TIGR01485 19 DNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPD-IWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRD 97 (249)
T ss_pred ChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCC-EEEEcCCceEEeCCCCcCCHHHHHHHhcccCHH
Confidence 3457799999999999999999999999999999999999986543 34443332110000 0000000000000 000
Q ss_pred hhhhc-c-CCchhhhhccCCCCeEEEE--cchhHHHHHhhCchhHHHHHhhccE-E-----EecCH--HHHHHHHHHHHH
Q psy6090 275 KAKKL-N-YSKTEEELGLSSGAYKFAV--TGKSWELIRDQMPELIPRIIVKGAI-F-----ARMSS--DQKQQLVLELQQ 342 (674)
Q Consensus 275 ~~~~~-~-~~~~~~~~~~~~~~~~l~i--tG~~~~~i~~~~~~~~~~i~~~~~V-f-----aR~sP--~qK~~iV~~lq~ 342 (674)
....+ . ..............+.+.+ ..+....+.+...+.+...-.+..+ . -...| ..|...++.+.+
T Consensus 98 ~~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~ 177 (249)
T TIGR01485 98 IVVAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQ 177 (249)
T ss_pred HHHHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHH
Confidence 00000 0 0000000000112233333 2222111111111222211111111 1 12233 379999998876
Q ss_pred c-C---CEEEEeCCCccchhhhhh-CCcceeecCCccccccC---------ccccccchhHHHHHHH
Q psy6090 343 L-G---YYVAMCGDGANDCGALRA-AHAGISLSEAESSVASP---------FTSTVANISCVLRIIR 395 (674)
Q Consensus 343 ~-g---~~V~m~GDG~ND~~aLk~-AdvGIams~aeasvAAd---------f~s~~~~i~~V~~~I~ 395 (674)
. | ..|+++||+.||.+|++. ++.||+|+|+...+.+. +.++...-+++.++|+
T Consensus 178 ~~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~ 244 (249)
T TIGR01485 178 KLAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNAQEELLQWYDENAKDKIYHASERCAGGIIEAIA 244 (249)
T ss_pred HcCCCccCEEEEECChhHHHHHHccCCcEEEECCCHHHHHHHHHhcccCcEEEecCCCcHHHHHHHH
Confidence 4 3 579999999999999998 67999999998776321 5666666788887775
No 56
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=98.57 E-value=1.2e-07 Score=96.49 Aligned_cols=65 Identities=18% Similarity=0.234 Sum_probs=56.1
Q ss_pred HHHHHHHHHHHc-C---CEEEEeCCCccchhhhhhCCcceeecCCcccc--ccC----ccccccchhHHHHHHHH
Q psy6090 332 QKQQLVLELQQL-G---YYVAMCGDGANDCGALRAAHAGISLSEAESSV--ASP----FTSTVANISCVLRIIRE 396 (674)
Q Consensus 332 qK~~iV~~lq~~-g---~~V~m~GDG~ND~~aLk~AdvGIams~aeasv--AAd----f~s~~~~i~~V~~~I~e 396 (674)
.|...++.+.++ | ..++++||+.||.+|++.|+.||+|+|+...+ .|+ +++..++-++|.++|++
T Consensus 159 ~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~~ 233 (236)
T TIGR02471 159 SKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVGNHDPELEGLRHQQRIYFANNPHAFGILEGINH 233 (236)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEcCCcHHHHHhhcCCcEEEcCCCChhHHHHHHHh
Confidence 799999988764 4 36899999999999999999999999998887 467 77788888999998864
No 57
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=98.53 E-value=2.3e-07 Score=89.26 Aligned_cols=104 Identities=17% Similarity=0.192 Sum_probs=76.7
Q ss_pred HHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCCCCCCCeEEEEeCCCCCCCCCCceEEEEcCcchhhhhhhhccCCchh
Q psy6090 206 EGVIKELKDARVKVVMITGDNIQTAISVAKECGIIDPGETVVDVSAVPGGLKECPKVYFTVSGVSAIQTKAKKLNYSKTE 285 (674)
Q Consensus 206 ~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~gi~~~~~~vi~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 285 (674)
-..|+.|+++|+++.++|+.+...+....+.+|+.. .+.
T Consensus 40 ~~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~----~f~------------------------------------- 78 (169)
T TIGR02726 40 GMGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKR----FHE------------------------------------- 78 (169)
T ss_pred HHHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcE----EEe-------------------------------------
Confidence 357999999999999999999999999999999941 100
Q ss_pred hhhccCCCCeEEEEcchhHHHHHhhCchhHHHHHhhccEEEecCHHHHHHHHHHHHHcCCEEEEeCCCccchhhhhhCCc
Q psy6090 286 EELGLSSGAYKFAVTGKSWELIRDQMPELIPRIIVKGAIFARMSSDQKQQLVLELQQLGYYVAMCGDGANDCGALRAAHA 365 (674)
Q Consensus 286 ~~~~~~~~~~~l~itG~~~~~i~~~~~~~~~~i~~~~~VfaR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~aLk~Adv 365 (674)
. + .-.|+-...+++.+.-....++++||+.||..|++.|++
T Consensus 79 ------------~-------------------------~--kpkp~~~~~~~~~l~~~~~ev~~iGD~~nDi~~~~~ag~ 119 (169)
T TIGR02726 79 ------------G-------------------------I--KKKTEPYAQMLEEMNISDAEVCYVGDDLVDLSMMKRVGL 119 (169)
T ss_pred ------------c-------------------------C--CCCHHHHHHHHHHcCcCHHHEEEECCCHHHHHHHHHCCC
Confidence 0 0 011222233333332223579999999999999999999
Q ss_pred ceeecCCcccc--ccCccccccchhH
Q psy6090 366 GISLSEAESSV--ASPFTSTVANISC 389 (674)
Q Consensus 366 GIams~aeasv--AAdf~s~~~~i~~ 389 (674)
+++|+|+...+ +|++++..++-++
T Consensus 120 ~~am~nA~~~lk~~A~~I~~~~~~~g 145 (169)
T TIGR02726 120 AVAVGDAVADVKEAAAYVTTARGGHG 145 (169)
T ss_pred eEECcCchHHHHHhCCEEcCCCCCCC
Confidence 99999998877 6888876655444
No 58
>PLN02382 probable sucrose-phosphatase
Probab=98.45 E-value=5.1e-07 Score=99.32 Aligned_cols=192 Identities=15% Similarity=0.130 Sum_probs=100.1
Q ss_pred CCcchHHHH-HHHHhcCCeEEEEcCCCHhhHHHHHHHcCCCCCCCeEEEEeCCCCCC--CCCCceEEEEcCc-----chh
Q psy6090 201 LKPQTEGVI-KELKDARVKVVMITGDNIQTAISVAKECGIIDPGETVVDVSAVPGGL--KECPKVYFTVSGV-----SAI 272 (674)
Q Consensus 201 lk~~t~~~I-~~L~~agIrvvmiTGDn~~TA~~vA~~~gi~~~~~~vi~~~~~~~~~--~~~~~i~~~~~~~-----~~~ 272 (674)
+.+....++ +++++.|+.++++|||.+..+..+.++.++..+. .+|..++..... .......|..... ...
T Consensus 29 ~s~~~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~-~~I~~nGt~I~~~~~~~~d~~w~~~l~~~w~~~~v 107 (413)
T PLN02382 29 LSLLRFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPD-ITIMSVGTEIAYGESMVPDHGWVEYLNKKWDREIV 107 (413)
T ss_pred hhHHHHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCC-EEEEcCCcEEEeCCCCccChhHHHHHhccCChhhH
Confidence 333445555 8899999999999999999999999999987654 233333321100 0000001100000 000
Q ss_pred hhhhhhccCCchhhhhccCCCCeEEEE--cchhHHHHHhhCchhHHHHHhhccE------EEecCHH--HHHHHHHHHHH
Q psy6090 273 QTKAKKLNYSKTEEELGLSSGAYKFAV--TGKSWELIRDQMPELIPRIIVKGAI------FARMSSD--QKQQLVLELQQ 342 (674)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~l~i--tG~~~~~i~~~~~~~~~~i~~~~~V------faR~sP~--qK~~iV~~lq~ 342 (674)
..............+ .....+.+.+ ..+....+.+...+.+.+.-..+.+ +....|. .|...++.+.+
T Consensus 108 ~~~~~~~~~l~~q~~--~~~~~~Ki~~~~~~~~~~~~~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~ 185 (413)
T PLN02382 108 VEETSKFPELKLQPE--TEQRPHKVSFYVDKKKAQEVIKELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLK 185 (413)
T ss_pred HHHHhcCCCcccCCc--ccCCCeEEEEEechHHhHHHHHHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHH
Confidence 000000000000000 0112233233 2222222222211212110011111 2334444 59999998876
Q ss_pred c----C---CEEEEeCCCccchhhhhhCC-cceeecCCccccc---cCcc--------ccccchhHHHHHHH
Q psy6090 343 L----G---YYVAMCGDGANDCGALRAAH-AGISLSEAESSVA---SPFT--------STVANISCVLRIIR 395 (674)
Q Consensus 343 ~----g---~~V~m~GDG~ND~~aLk~Ad-vGIams~aeasvA---Adf~--------s~~~~i~~V~~~I~ 395 (674)
. | ..|++|||+.||.+||+.|+ .||+|+|+...+. ++.+ +....-++|.++|+
T Consensus 186 ~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA~~elk~~a~~~~~~~~~~~~a~~~~~~GI~~al~ 257 (413)
T PLN02382 186 KLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNAQEELLQWYAENAKDNPKIIHATERCAAGIIQAIG 257 (413)
T ss_pred HhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCCcHHHHHHHHhhccCCCcEEEcCCCCccHHHHHHH
Confidence 4 3 48999999999999999999 6999999987772 2222 23455677776664
No 59
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=98.39 E-value=8.6e-07 Score=89.69 Aligned_cols=48 Identities=17% Similarity=0.236 Sum_probs=41.6
Q ss_pred eeehhccCCCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCCC
Q psy6090 193 GLIILENRLKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKECGII 240 (674)
Q Consensus 193 Gli~~en~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~gi~ 240 (674)
|.+.-.+..-+++.++|++|+++|++++++||+....+..+++++|+.
T Consensus 8 GTLl~~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~ 55 (225)
T TIGR02461 8 GTLLPPGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVE 55 (225)
T ss_pred CCCcCCCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 444445566678999999999999999999999999999999999984
No 60
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=98.38 E-value=1.6e-06 Score=87.38 Aligned_cols=51 Identities=12% Similarity=0.178 Sum_probs=42.5
Q ss_pred CCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCCCCCCCeEEEEeCCC
Q psy6090 201 LKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKECGIIDPGETVVDVSAVP 253 (674)
Q Consensus 201 lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~gi~~~~~~vi~~~~~~ 253 (674)
.-+.+.++|+.|+++||+++++||+....+..+++++|+.. .++|..++.-
T Consensus 17 ~~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~~--~~~I~~NGa~ 67 (221)
T TIGR02463 17 DWQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLTG--DPYIAENGAA 67 (221)
T ss_pred CcHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCC--CcEEEeCCcE
Confidence 33458999999999999999999999999999999999841 4567666653
No 61
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=98.36 E-value=8.4e-07 Score=84.30 Aligned_cols=104 Identities=18% Similarity=0.260 Sum_probs=75.7
Q ss_pred HHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCCCCCCCeEEEEeCCCCCCCCCCceEEEEcCcchhhhhhhhccCCchhhh
Q psy6090 208 VIKELKDARVKVVMITGDNIQTAISVAKECGIIDPGETVVDVSAVPGGLKECPKVYFTVSGVSAIQTKAKKLNYSKTEEE 287 (674)
Q Consensus 208 ~I~~L~~agIrvvmiTGDn~~TA~~vA~~~gi~~~~~~vi~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (674)
+|++|++.|+++.++||++...+..+++..|+.. .+.
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~----~~~--------------------------------------- 72 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITH----LYQ--------------------------------------- 72 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCE----EEe---------------------------------------
Confidence 8999999999999999999999999999999831 110
Q ss_pred hccCCCCeEEEEcchhHHHHHhhCchhHHHHHhhccEEEecCHHHHHHHHHHH-HHc---CCEEEEeCCCccchhhhhhC
Q psy6090 288 LGLSSGAYKFAVTGKSWELIRDQMPELIPRIIVKGAIFARMSSDQKQQLVLEL-QQL---GYYVAMCGDGANDCGALRAA 363 (674)
Q Consensus 288 ~~~~~~~~~l~itG~~~~~i~~~~~~~~~~i~~~~~VfaR~sP~qK~~iV~~l-q~~---g~~V~m~GDG~ND~~aLk~A 363 (674)
+. ..|...++.+ ++. ...++|+||+.||..|++.|
T Consensus 73 -------------~~----------------------------~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~a 111 (154)
T TIGR01670 73 -------------GQ----------------------------SNKLIAFSDILEKLALAPENVAYIGDDLIDWPVMEKV 111 (154)
T ss_pred -------------cc----------------------------cchHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHC
Confidence 00 0122222222 222 35799999999999999999
Q ss_pred CcceeecCCcccc--ccCccccccchhH-HHHHHH
Q psy6090 364 HAGISLSEAESSV--ASPFTSTVANISC-VLRIIR 395 (674)
Q Consensus 364 dvGIams~aeasv--AAdf~s~~~~i~~-V~~~I~ 395 (674)
++++++.++.+.+ .|++++..+.-++ +.++++
T Consensus 112 g~~~~v~~~~~~~~~~a~~i~~~~~~~g~~~~~~~ 146 (154)
T TIGR01670 112 GLSVAVADAHPLLIPRADYVTRIAGGRGAVREVCE 146 (154)
T ss_pred CCeEecCCcCHHHHHhCCEEecCCCCCcHHHHHHH
Confidence 9999999887665 4788887665333 555443
No 62
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=98.34 E-value=2.5e-06 Score=85.75 Aligned_cols=128 Identities=24% Similarity=0.300 Sum_probs=87.2
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCCCCCCCeEEEEeCCCCCCCCCCceEEEEcCcchhhhhhhhc
Q psy6090 200 RLKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKECGIIDPGETVVDVSAVPGGLKECPKVYFTVSGVSAIQTKAKKL 279 (674)
Q Consensus 200 ~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~gi~~~~~~vi~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 279 (674)
++.|++.+.|+.|+++|+++.++||.+...+..+++.+|+..--...+..+ +
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~~~~~----~------------------------ 136 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVE----D------------------------ 136 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeEEEEE----C------------------------
Confidence 689999999999999999999999999999999999999843100000000 0
Q ss_pred cCCchhhhhccCCCCeEEEEcchhHHHHHhhCchhHHHHHhhccEEEe-cCHHHHHHHHHHHHH-cC---CEEEEeCCCc
Q psy6090 280 NYSKTEEELGLSSGAYKFAVTGKSWELIRDQMPELIPRIIVKGAIFAR-MSSDQKQQLVLELQQ-LG---YYVAMCGDGA 354 (674)
Q Consensus 280 ~~~~~~~~~~~~~~~~~l~itG~~~~~i~~~~~~~~~~i~~~~~VfaR-~sP~qK~~iV~~lq~-~g---~~V~m~GDG~ 354 (674)
. .++|.. ..+ ..+..|..+++.+.+ .+ ..++++||+.
T Consensus 137 -------------~----~~~~~~---------------------~~~~~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~ 178 (219)
T TIGR00338 137 -------------G----KLTGLV---------------------EGPIVDASYKGKTLLILLRKEGISPENTVAVGDGA 178 (219)
T ss_pred -------------C----EEEEEe---------------------cCcccCCcccHHHHHHHHHHcCCCHHHEEEEECCH
Confidence 0 001100 000 111224555554443 33 3688999999
Q ss_pred cchhhhhhCCcceeecCCcccc-ccCccccccchhHHHHH
Q psy6090 355 NDCGALRAAHAGISLSEAESSV-ASPFTSTVANISCVLRI 393 (674)
Q Consensus 355 ND~~aLk~AdvGIams~aeasv-AAdf~s~~~~i~~V~~~ 393 (674)
||..|++.||+++++...+... +|+++..+.++..+..+
T Consensus 179 ~Di~aa~~ag~~i~~~~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 179 NDLSMIKAAGLGIAFNAKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred HHHHHHHhCCCeEEeCCCHHHHHhchhccCCCCHHHHHhh
Confidence 9999999999999997544322 78899888888776654
No 63
>PTZ00174 phosphomannomutase; Provisional
Probab=98.21 E-value=3.1e-06 Score=86.93 Aligned_cols=46 Identities=22% Similarity=0.245 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHHcCCEEEEeCC----CccchhhhhhC-CcceeecCCcccc
Q psy6090 331 DQKQQLVLELQQLGYYVAMCGD----GANDCGALRAA-HAGISLSEAESSV 376 (674)
Q Consensus 331 ~qK~~iV~~lq~~g~~V~m~GD----G~ND~~aLk~A-dvGIams~aeasv 376 (674)
-+|+..++.|.+....|++||| |.||.+||+.| -.|++++|++..+
T Consensus 187 vsKg~al~~L~~~~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n~~~~~ 237 (247)
T PTZ00174 187 WDKTYCLRHLENDFKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKNPEDTI 237 (247)
T ss_pred CcHHHHHHHHHhhhhhEEEEcccCCCCCCcHhhhhcCCCceEEeCCHHHHH
Confidence 3799999999888889999999 99999999976 6778888876554
No 64
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=98.18 E-value=3.4e-06 Score=82.53 Aligned_cols=38 Identities=34% Similarity=0.545 Sum_probs=36.2
Q ss_pred cchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCCC
Q psy6090 203 PQTEGVIKELKDARVKVVMITGDNIQTAISVAKECGII 240 (674)
Q Consensus 203 ~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~gi~ 240 (674)
+++.+.|+.++++|++++++||+....+..+|+.+|+.
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~ 129 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGID 129 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSS
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCC
Confidence 77779999999999999999999999999999999995
No 65
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=98.16 E-value=1.7e-05 Score=78.73 Aligned_cols=105 Identities=27% Similarity=0.328 Sum_probs=77.6
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCCCCCCCeEEEEeCCCCCCCCCCceEEEEcCcchhhhhhhhc
Q psy6090 200 RLKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKECGIIDPGETVVDVSAVPGGLKECPKVYFTVSGVSAIQTKAKKL 279 (674)
Q Consensus 200 ~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~gi~~~~~~vi~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 279 (674)
++.|++.++++.|+++ +++.++||.....+..+.+++|+..--...+.... ..
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~~--~~------------------------ 120 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVDE--DG------------------------ 120 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcceEEECC--CC------------------------
Confidence 5789999999999999 99999999999999999999998421000000000 00
Q ss_pred cCCchhhhhccCCCCeEEEEcchhHHHHHhhCchhHHHHHhhccEEEecCHHHHHHHHHHHHHcCCEEEEeCCCccchhh
Q psy6090 280 NYSKTEEELGLSSGAYKFAVTGKSWELIRDQMPELIPRIIVKGAIFARMSSDQKQQLVLELQQLGYYVAMCGDGANDCGA 359 (674)
Q Consensus 280 ~~~~~~~~~~~~~~~~~l~itG~~~~~i~~~~~~~~~~i~~~~~VfaR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~a 359 (674)
.++|.. -..|+.|...++.++..+..++|+|||.||..|
T Consensus 121 ------------------~i~~~~-----------------------~~~p~~k~~~l~~~~~~~~~~v~iGDs~~D~~~ 159 (205)
T PRK13582 121 ------------------MITGYD-----------------------LRQPDGKRQAVKALKSLGYRVIAAGDSYNDTTM 159 (205)
T ss_pred ------------------eEECcc-----------------------ccccchHHHHHHHHHHhCCeEEEEeCCHHHHHH
Confidence 011100 013567888888888888899999999999999
Q ss_pred hhhCCcceeecCC
Q psy6090 360 LRAAHAGISLSEA 372 (674)
Q Consensus 360 Lk~AdvGIams~a 372 (674)
.++|++|+.....
T Consensus 160 ~~aa~~~v~~~~~ 172 (205)
T PRK13582 160 LGEADAGILFRPP 172 (205)
T ss_pred HHhCCCCEEECCC
Confidence 9999999987654
No 66
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=98.14 E-value=4e-06 Score=82.06 Aligned_cols=96 Identities=20% Similarity=0.281 Sum_probs=70.4
Q ss_pred HHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCCCCCCCeEEEEeCCCCCCCCCCceEEEEcCcchhhhhhhhccCCchhh
Q psy6090 207 GVIKELKDARVKVVMITGDNIQTAISVAKECGIIDPGETVVDVSAVPGGLKECPKVYFTVSGVSAIQTKAKKLNYSKTEE 286 (674)
Q Consensus 207 ~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~gi~~~~~~vi~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 286 (674)
.+|+.|++.|+++.++||++...+..+++++|+.. ++.
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~----~f~-------------------------------------- 92 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITH----LYQ-------------------------------------- 92 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCce----eec--------------------------------------
Confidence 69999999999999999999999999999999831 100
Q ss_pred hhccCCCCeEEEEcchhHHHHHhhCchhHHHHHhhccEEEecCHHHHHHHHHH-HHHcC---CEEEEeCCCccchhhhhh
Q psy6090 287 ELGLSSGAYKFAVTGKSWELIRDQMPELIPRIIVKGAIFARMSSDQKQQLVLE-LQQLG---YYVAMCGDGANDCGALRA 362 (674)
Q Consensus 287 ~~~~~~~~~~l~itG~~~~~i~~~~~~~~~~i~~~~~VfaR~sP~qK~~iV~~-lq~~g---~~V~m~GDG~ND~~aLk~ 362 (674)
| .+.|...++. ++++| ..|+|+||+.||..|++.
T Consensus 93 --------------g----------------------------~~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~~~a~~ 130 (183)
T PRK09484 93 --------------G----------------------------QSNKLIAFSDLLEKLAIAPEQVAYIGDDLIDWPVMEK 130 (183)
T ss_pred --------------C----------------------------CCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHH
Confidence 0 0112222222 23333 479999999999999999
Q ss_pred CCcceeecCCcccc--ccCccccccc
Q psy6090 363 AHAGISLSEAESSV--ASPFTSTVAN 386 (674)
Q Consensus 363 AdvGIams~aeasv--AAdf~s~~~~ 386 (674)
|++++++++++... .|+++...+.
T Consensus 131 aG~~~~v~~~~~~~~~~a~~v~~~~~ 156 (183)
T PRK09484 131 VGLSVAVADAHPLLLPRADYVTRIAG 156 (183)
T ss_pred CCCeEecCChhHHHHHhCCEEecCCC
Confidence 99999988765444 4778876443
No 67
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=98.13 E-value=1.9e-05 Score=82.06 Aligned_cols=184 Identities=11% Similarity=0.101 Sum_probs=93.5
Q ss_pred CCCcchHHHHHHHHh-cCCeEEEEcCCCHhhHHHHHHHcCCCCCCCeEEEEeCCCCCCCCCCceEEEEcCcchhhhhhhh
Q psy6090 200 RLKPQTEGVIKELKD-ARVKVVMITGDNIQTAISVAKECGIIDPGETVVDVSAVPGGLKECPKVYFTVSGVSAIQTKAKK 278 (674)
Q Consensus 200 ~lk~~t~~~I~~L~~-agIrvvmiTGDn~~TA~~vA~~~gi~~~~~~vi~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 278 (674)
.+.+++.++|++|++ .|++++++|||+...+..+++..++ .++..++....... ...................
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~-----~~i~~nGa~i~~~~-~~~~~~~l~~~~~~~i~~~ 109 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRF-----PLAGVHGAERRDIN-GKTHIVHLPDAIARDISVQ 109 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccc-----eEEEeCCCeeecCC-CCeeeccCChhHHHHHHHH
Confidence 567899999999998 8999999999999999888876653 23333333221111 1111111111110000000
Q ss_pred ccC-CchhhhhccCCCCeEEEEcch----hHHHHHhhCchhHHHHH-----hhccEEEecCH--HHHHHHHHHHHHc-C-
Q psy6090 279 LNY-SKTEEELGLSSGAYKFAVTGK----SWELIRDQMPELIPRII-----VKGAIFARMSS--DQKQQLVLELQQL-G- 344 (674)
Q Consensus 279 ~~~-~~~~~~~~~~~~~~~l~itG~----~~~~i~~~~~~~~~~i~-----~~~~VfaR~sP--~qK~~iV~~lq~~-g- 344 (674)
+.. ...........+...++.... .-+.+. ...+.+.+.. ....-+....| .+|...++.+.+. |
T Consensus 110 l~~~~~~~pg~~ve~k~~~~~~h~r~~~~~~~~~~-~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~ 188 (266)
T PRK10187 110 LHTALAQLPGAELEAKGMAFALHYRQAPQHEDALL-ALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPF 188 (266)
T ss_pred HHHHhccCCCcEEEeCCcEEEEECCCCCccHHHHH-HHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCC
Confidence 100 000000000111111221111 001110 0000111000 01112222333 3799999887664 3
Q ss_pred --CEEEEeCCCccchhhhhhC----CcceeecCCccccccCccccccchhHHHHHH
Q psy6090 345 --YYVAMCGDGANDCGALRAA----HAGISLSEAESSVASPFTSTVANISCVLRII 394 (674)
Q Consensus 345 --~~V~m~GDG~ND~~aLk~A----dvGIams~aeasvAAdf~s~~~~i~~V~~~I 394 (674)
..++++||+.||.+|++.+ +.||+|+++.. .|++.+. +.+.|...+
T Consensus 189 ~~~~v~~~GD~~nD~~mf~~~~~~~g~~vavg~a~~--~A~~~l~--~~~~v~~~L 240 (266)
T PRK10187 189 AGRTPVFVGDDLTDEAGFAVVNRLGGISVKVGTGAT--QASWRLA--GVPDVWSWL 240 (266)
T ss_pred CCCeEEEEcCCccHHHHHHHHHhcCCeEEEECCCCC--cCeEeCC--CHHHHHHHH
Confidence 5799999999999999999 99999998743 3555544 444555444
No 68
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=98.11 E-value=1.4e-05 Score=78.76 Aligned_cols=108 Identities=24% Similarity=0.266 Sum_probs=75.7
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCCCCCCCeEEEEeCCCCCCCCCCceEEEEcCcchhhhhhhhc
Q psy6090 200 RLKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKECGIIDPGETVVDVSAVPGGLKECPKVYFTVSGVSAIQTKAKKL 279 (674)
Q Consensus 200 ~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~gi~~~~~~vi~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 279 (674)
++.|++.++|+.|++.|+++.++||-....+..+++.+|+.. ++.......+.
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~----~~~~~~~~~~~----------------------- 132 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDY----VYSNELVFDEK----------------------- 132 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCe----EEEEEEEEcCC-----------------------
Confidence 689999999999999999999999999999999999999731 21110000000
Q ss_pred cCCchhhhhccCCCCeEEEEcchhHHHHHhhCchhHHHHHhhccEEEecCHHHHHHHHHHHHH-cC---CEEEEeCCCcc
Q psy6090 280 NYSKTEEELGLSSGAYKFAVTGKSWELIRDQMPELIPRIIVKGAIFARMSSDQKQQLVLELQQ-LG---YYVAMCGDGAN 355 (674)
Q Consensus 280 ~~~~~~~~~~~~~~~~~l~itG~~~~~i~~~~~~~~~~i~~~~~VfaR~sP~qK~~iV~~lq~-~g---~~V~m~GDG~N 355 (674)
. ..++ ..+..+.|..|..+++.+.+ .| ..++++||+.|
T Consensus 133 -------------g----~~~p---------------------~~~~~~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~ 174 (201)
T TIGR01491 133 -------------G----FIQP---------------------DGIVRVTFDNKGEAVERLKRELNPSLTETVAVGDSKN 174 (201)
T ss_pred -------------C----eEec---------------------ceeeEEccccHHHHHHHHHHHhCCCHHHEEEEcCCHh
Confidence 0 0000 01112345567666666544 33 46999999999
Q ss_pred chhhhhhCCcceeecCC
Q psy6090 356 DCGALRAAHAGISLSEA 372 (674)
Q Consensus 356 D~~aLk~AdvGIams~a 372 (674)
|..|++.||+++++...
T Consensus 175 D~~~a~~ag~~~a~~~~ 191 (201)
T TIGR01491 175 DLPMFEVADISISLGDE 191 (201)
T ss_pred HHHHHHhcCCeEEECCC
Confidence 99999999999999754
No 69
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=98.09 E-value=1e-05 Score=92.13 Aligned_cols=48 Identities=17% Similarity=0.185 Sum_probs=40.4
Q ss_pred eeehhcc-CCCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCCC
Q psy6090 193 GLIILEN-RLKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKECGII 240 (674)
Q Consensus 193 Gli~~en-~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~gi~ 240 (674)
|.+.-.+ ..-+.+.++|++|+++||.++++||+....+..+++++|+.
T Consensus 425 GTLLd~d~~i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~ 473 (694)
T PRK14502 425 GTLLNPLTYSYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIK 473 (694)
T ss_pred CCCcCCCCccCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 4444433 35578899999999999999999999999999999999973
No 70
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.06 E-value=9.2e-05 Score=76.45 Aligned_cols=51 Identities=6% Similarity=0.040 Sum_probs=42.9
Q ss_pred ccCCCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCCCCCCCeEEEEeC
Q psy6090 198 ENRLKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKECGIIDPGETVVDVSA 251 (674)
Q Consensus 198 en~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~gi~~~~~~vi~~~~ 251 (674)
++..-+.+.++|++|+++||.++++||+.......+.+++|+. .++|..|+
T Consensus 16 ~~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~---~p~I~eNG 66 (302)
T PRK12702 16 EFNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLE---HPFICEDG 66 (302)
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCC---CeEEEeCC
Confidence 3446678999999999999999999999999999999999984 24555554
No 71
>KOG1615|consensus
Probab=98.00 E-value=1.4e-05 Score=76.14 Aligned_cols=108 Identities=25% Similarity=0.302 Sum_probs=75.0
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCCCCCCCe--EEEEeCCCCCCCCCCceEEEEcCcchhhhhhh
Q psy6090 200 RLKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKECGIIDPGET--VVDVSAVPGGLKECPKVYFTVSGVSAIQTKAK 277 (674)
Q Consensus 200 ~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~gi~~~~~~--vi~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 277 (674)
.+-|++++..+.||+.|.++.++||--..-+..||.++||...+-. .+....
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~-------------------------- 141 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDK-------------------------- 141 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeecc--------------------------
Confidence 3789999999999999999999999999999999999999643211 000000
Q ss_pred hccCCchhhhhccCCCCe-EEEEcchhHHHHHhhCchhHHHHHhhccEEEecCHHHHHHHHHHHHHc--CCEEEEeCCCc
Q psy6090 278 KLNYSKTEEELGLSSGAY-KFAVTGKSWELIRDQMPELIPRIIVKGAIFARMSSDQKQQLVLELQQL--GYYVAMCGDGA 354 (674)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~-~l~itG~~~~~i~~~~~~~~~~i~~~~~VfaR~sP~qK~~iV~~lq~~--g~~V~m~GDG~ 354 (674)
...| .+..++. - +....|+.++..+++. ...++|+|||+
T Consensus 142 --------------~Gk~~gfd~~~p----------------------t--sdsggKa~~i~~lrk~~~~~~~~mvGDGa 183 (227)
T KOG1615|consen 142 --------------DGKYLGFDTNEP----------------------T--SDSGGKAEVIALLRKNYNYKTIVMVGDGA 183 (227)
T ss_pred --------------CCcccccccCCc----------------------c--ccCCccHHHHHHHHhCCChheeEEecCCc
Confidence 0000 0000000 0 1113688888888873 35889999999
Q ss_pred cchhhhhhCCcceeecC
Q psy6090 355 NDCGALRAAHAGISLSE 371 (674)
Q Consensus 355 ND~~aLk~AdvGIams~ 371 (674)
||.+|+..|+.=|+.+.
T Consensus 184 tDlea~~pa~afi~~~g 200 (227)
T KOG1615|consen 184 TDLEAMPPADAFIGFGG 200 (227)
T ss_pred cccccCCchhhhhccCC
Confidence 99999999776666553
No 72
>PRK08238 hypothetical protein; Validated
Probab=97.91 E-value=0.0011 Score=74.44 Aligned_cols=41 Identities=20% Similarity=0.259 Sum_probs=38.5
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCCC
Q psy6090 200 RLKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKECGII 240 (674)
Q Consensus 200 ~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~gi~ 240 (674)
|+.|++.+.|+++++.|++++++|+-+...+..+++..|+.
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlF 112 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLF 112 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 47899999999999999999999999999999999999983
No 73
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=97.89 E-value=5.3e-05 Score=75.98 Aligned_cols=114 Identities=11% Similarity=0.116 Sum_probs=75.9
Q ss_pred ccCCCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCCCCCCCeEEEEeCCCCCCCCCCceEEEEcCcchhhhhhh
Q psy6090 198 ENRLKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKECGIIDPGETVVDVSAVPGGLKECPKVYFTVSGVSAIQTKAK 277 (674)
Q Consensus 198 en~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~gi~~~~~~vi~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 277 (674)
+.+++|++.+.++.|++.|+++.++||.....+..+++..+.. ..++..+..
T Consensus 68 ~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~---~~i~~n~~~------------------------- 119 (214)
T TIGR03333 68 TAEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEK---DRIYCNEAD------------------------- 119 (214)
T ss_pred cCcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCc---ccEEeceeE-------------------------
Confidence 3579999999999999999999999999998888888877442 222211100
Q ss_pred hccCCchhhhhccCCCCeEEEEcchhHHHHHhhCchhHHHHHhhccE-EEecCHHHHHHHHHHHHHcCCEEEEeCCCccc
Q psy6090 278 KLNYSKTEEELGLSSGAYKFAVTGKSWELIRDQMPELIPRIIVKGAI-FARMSSDQKQQLVLELQQLGYYVAMCGDGAND 356 (674)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~l~itG~~~~~i~~~~~~~~~~i~~~~~V-faR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND 356 (674)
.+|..+.. ..|. + ... +.......|..+++.++.....+.|+|||.||
T Consensus 120 ---------------------~~~~~~~~---~~p~--~-----~~~~~~~~cg~~K~~~l~~~~~~~~~~i~iGDg~~D 168 (214)
T TIGR03333 120 ---------------------FSNEYIHI---DWPH--P-----CDGTCQNQCGCCKPSLIRKLSEPNDYHIVIGDSVTD 168 (214)
T ss_pred ---------------------eeCCeeEE---eCCC--C-----CccccccCCCCCHHHHHHHHhhcCCcEEEEeCCHHH
Confidence 00000000 0000 0 000 00001347888898888777889999999999
Q ss_pred hhhhhhCCcceeec
Q psy6090 357 CGALRAAHAGISLS 370 (674)
Q Consensus 357 ~~aLk~AdvGIams 370 (674)
..|++.||++++=+
T Consensus 169 ~~~a~~Ad~~~ar~ 182 (214)
T TIGR03333 169 VEAAKQSDLCFARD 182 (214)
T ss_pred HHHHHhCCeeEehH
Confidence 99999999987744
No 74
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=97.88 E-value=4.8e-05 Score=74.11 Aligned_cols=114 Identities=14% Similarity=0.073 Sum_probs=76.2
Q ss_pred cCCCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCCCCCCCeEEEEeCCCCCCCCCCceEEEEcCcchhhhhhhh
Q psy6090 199 NRLKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKECGIIDPGETVVDVSAVPGGLKECPKVYFTVSGVSAIQTKAKK 278 (674)
Q Consensus 199 n~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~gi~~~~~~vi~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 278 (674)
.++.|++.+.++.|++.|+++.++|+.+...+..+.+..|+...-+.++..+.....
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~----------------------- 127 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFIEIYSNPASFDN----------------------- 127 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhheeEEeccCceECC-----------------------
Confidence 579999999999999999999999999999999999999984322222211100000
Q ss_pred ccCCchhhhhccCCCCeEEEEcchhHHHHHhhCchhHHHHHhhccEEEe-cCHHHHHHHHHHHHHc-CCEEEEeCCCccc
Q psy6090 279 LNYSKTEEELGLSSGAYKFAVTGKSWELIRDQMPELIPRIIVKGAIFAR-MSSDQKQQLVLELQQL-GYYVAMCGDGAND 356 (674)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~l~itG~~~~~i~~~~~~~~~~i~~~~~VfaR-~sP~qK~~iV~~lq~~-g~~V~m~GDG~ND 356 (674)
.. .+++. + .++.++.. .....|..+++.+++. ...++++|||.||
T Consensus 128 --------------~g---~~~~~---------~-------~~~~~~~~~~~g~~K~~~~~~~~~~~~~~~i~iGD~~~D 174 (188)
T TIGR01489 128 --------------DG---RHIVW---------P-------HHCHGCCSCPCGCCKGKVIHKLSEPKYQHIIYIGDGVTD 174 (188)
T ss_pred --------------CC---cEEEe---------c-------CCCCccCcCCCCCCHHHHHHHHHhhcCceEEEECCCcch
Confidence 00 00000 0 00111111 1123578888888876 7899999999999
Q ss_pred hhhhhhCCccee
Q psy6090 357 CGALRAAHAGIS 368 (674)
Q Consensus 357 ~~aLk~AdvGIa 368 (674)
+.|.+.||+-.|
T Consensus 175 ~~aa~~~d~~~a 186 (188)
T TIGR01489 175 VCPAKLSDVVFA 186 (188)
T ss_pred hchHhcCCcccc
Confidence 999999987544
No 75
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=97.80 E-value=8.3e-05 Score=68.75 Aligned_cols=112 Identities=23% Similarity=0.280 Sum_probs=83.7
Q ss_pred HHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCCCCCCCeEEEEeCCCCCCCCCCceEEEEcCcchhhhhhhhccCCchhh
Q psy6090 207 GVIKELKDARVKVVMITGDNIQTAISVAKECGIIDPGETVVDVSAVPGGLKECPKVYFTVSGVSAIQTKAKKLNYSKTEE 286 (674)
Q Consensus 207 ~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~gi~~~~~~vi~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 286 (674)
..|+.|.++||++-++||++......=|+++||- .++
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~----~~~--------------------------------------- 78 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIK----HLY--------------------------------------- 78 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCc----eee---------------------------------------
Confidence 3689999999999999999999999999999992 111
Q ss_pred hhccCCCCeEEEEcchhHHHHHhhCchhHHHHHhhccEEEecCHHHHHHHHHHHH-HcC---CEEEEeCCCccchhhhhh
Q psy6090 287 ELGLSSGAYKFAVTGKSWELIRDQMPELIPRIIVKGAIFARMSSDQKQQLVLELQ-QLG---YYVAMCGDGANDCGALRA 362 (674)
Q Consensus 287 ~~~~~~~~~~l~itG~~~~~i~~~~~~~~~~i~~~~~VfaR~sP~qK~~iV~~lq-~~g---~~V~m~GDG~ND~~aLk~ 362 (674)
.| -++|....+.|. +.+ ..|+++||-.||.|+|+.
T Consensus 79 -------------qG----------------------------~~dK~~a~~~L~~~~~l~~e~~ayiGDD~~Dlpvm~~ 117 (170)
T COG1778 79 -------------QG----------------------------ISDKLAAFEELLKKLNLDPEEVAYVGDDLVDLPVMEK 117 (170)
T ss_pred -------------ec----------------------------hHhHHHHHHHHHHHhCCCHHHhhhhcCccccHHHHHH
Confidence 11 123444444333 332 578999999999999999
Q ss_pred CCcceeecCCccccc--cCcccccc----chhHHHHHHHHhhHHHH
Q psy6090 363 AHAGISLSEAESSVA--SPFTSTVA----NISCVLRIIREGRAALV 402 (674)
Q Consensus 363 AdvGIams~aeasvA--Adf~s~~~----~i~~V~~~I~eGR~~l~ 402 (674)
.+.+++..+|...+. |++++... ....+.++|..++..+.
T Consensus 118 vGls~a~~dAh~~v~~~a~~Vt~~~GG~GAvREv~dlil~aq~~~d 163 (170)
T COG1778 118 VGLSVAVADAHPLLKQRADYVTSKKGGEGAVREVCDLILQAQGKLD 163 (170)
T ss_pred cCCcccccccCHHHHHhhHhhhhccCcchHHHHHHHHHHHccCcHH
Confidence 999999999988884 88887654 35566666666665544
No 76
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=97.80 E-value=4.9e-05 Score=69.00 Aligned_cols=117 Identities=21% Similarity=0.157 Sum_probs=77.9
Q ss_pred hccCCCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCCCCCCCeEEEEeCCCCCCCCCCceEEEEcCcchhhhhh
Q psy6090 197 LENRLKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKECGIIDPGETVVDVSAVPGGLKECPKVYFTVSGVSAIQTKA 276 (674)
Q Consensus 197 ~en~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~gi~~~~~~vi~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 276 (674)
-..++.+++.+.|++|++.|++++++||.+...+..+++.+|+...-..++..+......
T Consensus 21 ~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-------------------- 80 (139)
T cd01427 21 EELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAIYY-------------------- 80 (139)
T ss_pred ccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhhheeccchhhhhc--------------------
Confidence 445789999999999999999999999999999999999999853333332211100000
Q ss_pred hhccCCchhhhhccCCCCeEEEEcchhHHHHHhhCchhHHHHHhhccEEEecCHHHHHHHHHHHHHcCCEEEEeCCCccc
Q psy6090 277 KKLNYSKTEEELGLSSGAYKFAVTGKSWELIRDQMPELIPRIIVKGAIFARMSSDQKQQLVLELQQLGYYVAMCGDGAND 356 (674)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~l~itG~~~~~i~~~~~~~~~~i~~~~~VfaR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND 356 (674)
+.. ..........+.+-.|+.+..+.+.+......++++||+.||
T Consensus 81 ------------------------~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~igD~~~d 125 (139)
T cd01427 81 ------------------------PKE-----------GLFLGGGPFDIGKPNPDKLLAALKLLGVDPEEVLMVGDSLND 125 (139)
T ss_pred ------------------------ccc-----------cccccccccccCCCCHHHHHHHHHHcCCChhhEEEeCCCHHH
Confidence 000 000001123445566666777777765555789999999999
Q ss_pred hhhhhh-CCccee
Q psy6090 357 CGALRA-AHAGIS 368 (674)
Q Consensus 357 ~~aLk~-AdvGIa 368 (674)
+.|.+. ..-+|+
T Consensus 126 ~~~~~~~g~~~i~ 138 (139)
T cd01427 126 IEMAKAAGGLGVA 138 (139)
T ss_pred HHHHHHcCCceee
Confidence 999998 444443
No 77
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=97.75 E-value=0.00017 Score=71.60 Aligned_cols=38 Identities=32% Similarity=0.535 Sum_probs=35.1
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHc
Q psy6090 200 RLKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKEC 237 (674)
Q Consensus 200 ~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~ 237 (674)
++.+++.++|++|++.|++++++||+....+..+.+++
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~ 54 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQL 54 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhC
Confidence 47799999999999999999999999999999998874
No 78
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=97.71 E-value=8.8e-05 Score=71.60 Aligned_cols=41 Identities=27% Similarity=0.353 Sum_probs=38.4
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCCC
Q psy6090 200 RLKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKECGII 240 (674)
Q Consensus 200 ~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~gi~ 240 (674)
+++|++.+.++.+++.|++++++||.+...+..+++..|+.
T Consensus 73 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~ 113 (177)
T TIGR01488 73 ALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGID 113 (177)
T ss_pred CcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCc
Confidence 36899999999999999999999999999999999999984
No 79
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=97.69 E-value=0.00014 Score=73.12 Aligned_cols=112 Identities=13% Similarity=0.107 Sum_probs=72.5
Q ss_pred cCCCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCCCCCCCeEEEEeCCCCCCCCCCceEEEEcCcchhhhhhhh
Q psy6090 199 NRLKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKECGIIDPGETVVDVSAVPGGLKECPKVYFTVSGVSAIQTKAKK 278 (674)
Q Consensus 199 n~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~gi~~~~~~vi~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 278 (674)
-+++|++.+.|+.|++.|+++.++||-+...+..+.+.. +.. ..++.....
T Consensus 73 ~~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~--~~i~~n~~~-------------------------- 123 (219)
T PRK09552 73 AEIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPK--EQIYCNGSD-------------------------- 123 (219)
T ss_pred CCcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCc--CcEEEeEEE--------------------------
Confidence 368999999999999999999999999999999999888 632 223321110
Q ss_pred ccCCchhhhhccCCCCeEEEEcchhHHHHHhhCchhHHHHHhhccEEEecCHHHHHHHHHHHHHcCCEEEEeCCCccchh
Q psy6090 279 LNYSKTEEELGLSSGAYKFAVTGKSWELIRDQMPELIPRIIVKGAIFARMSSDQKQQLVLELQQLGYYVAMCGDGANDCG 358 (674)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~l~itG~~~~~i~~~~~~~~~~i~~~~~VfaR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~ 358 (674)
.+|+.+.. ....+... ..-.++ ...|..+++.++.....+.|+|||.||..
T Consensus 124 --------------------~~~~~~~~-~kp~p~~~-------~~~~~~-~~~K~~~l~~~~~~~~~~i~iGDs~~Di~ 174 (219)
T PRK09552 124 --------------------FSGEYITI-TWPHPCDE-------HCQNHC-GCCKPSLIRKLSDTNDFHIVIGDSITDLE 174 (219)
T ss_pred --------------------ecCCeeEE-eccCCccc-------cccccC-CCchHHHHHHhccCCCCEEEEeCCHHHHH
Confidence 00100000 00000000 000000 12366777777766678999999999999
Q ss_pred hhhhCCccee
Q psy6090 359 ALRAAHAGIS 368 (674)
Q Consensus 359 aLk~AdvGIa 368 (674)
|.+.||+.++
T Consensus 175 aa~~Ag~~~a 184 (219)
T PRK09552 175 AAKQADKVFA 184 (219)
T ss_pred HHHHCCccee
Confidence 9999999777
No 80
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=97.62 E-value=0.00022 Score=70.60 Aligned_cols=111 Identities=17% Similarity=0.126 Sum_probs=77.2
Q ss_pred ccCCCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCCCCCCCeEEEEeCCCCCCCCCCceEEEEcCcchhhhhhh
Q psy6090 198 ENRLKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKECGIIDPGETVVDVSAVPGGLKECPKVYFTVSGVSAIQTKAK 277 (674)
Q Consensus 198 en~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~gi~~~~~~vi~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 277 (674)
..++.|++.+.|+.+++.|++++++||.....+..+++.+|+.. ++..+.....+
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~----~~~~~l~~~~~--------------------- 139 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDN----AIGTRLEESED--------------------- 139 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcc----eEecceEEcCC---------------------
Confidence 45789999999999999999999999999999999999999842 22110000000
Q ss_pred hccCCchhhhhccCCCCeEEEEcchhHHHHHhhCchhHHHHHhhccEEEecCHHHHHHHHHHHHH-cCC---EEEEeCCC
Q psy6090 278 KLNYSKTEEELGLSSGAYKFAVTGKSWELIRDQMPELIPRIIVKGAIFARMSSDQKQQLVLELQQ-LGY---YVAMCGDG 353 (674)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~l~itG~~~~~i~~~~~~~~~~i~~~~~VfaR~sP~qK~~iV~~lq~-~g~---~V~m~GDG 353 (674)
. ..+|+.. --.+.++.|...++.+.+ .+. .+.++||+
T Consensus 140 ---------------g----~~~g~~~--------------------~~~~~g~~K~~~l~~~~~~~~~~~~~~~~~gDs 180 (202)
T TIGR01490 140 ---------------G----IYTGNID--------------------GNNCKGEGKVHALAELLAEEQIDLKDSYAYGDS 180 (202)
T ss_pred ---------------C----EEeCCcc--------------------CCCCCChHHHHHHHHHHHHcCCCHHHcEeeeCC
Confidence 0 1122110 001235667776766543 443 68999999
Q ss_pred ccchhhhhhCCcceeecCC
Q psy6090 354 ANDCGALRAAHAGISLSEA 372 (674)
Q Consensus 354 ~ND~~aLk~AdvGIams~a 372 (674)
.+|.+|++.|+.++.+...
T Consensus 181 ~~D~~~~~~a~~~~~v~~~ 199 (202)
T TIGR01490 181 ISDLPLLSLVGHPYVVNPD 199 (202)
T ss_pred cccHHHHHhCCCcEEeCCC
Confidence 9999999999999988753
No 81
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=97.48 E-value=0.0011 Score=66.58 Aligned_cols=43 Identities=21% Similarity=0.301 Sum_probs=39.6
Q ss_pred ccCCCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCCC
Q psy6090 198 ENRLKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKECGII 240 (674)
Q Consensus 198 en~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~gi~ 240 (674)
..++.|++.+.++.|+++|++++++||.....+..+.+..|+.
T Consensus 91 ~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~ 133 (226)
T PRK13222 91 GSRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIA 133 (226)
T ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCc
Confidence 3568999999999999999999999999999999999999984
No 82
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=97.46 E-value=0.00027 Score=72.54 Aligned_cols=66 Identities=18% Similarity=0.261 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHHc-C---CEEEEeCCCccchhhhhhCCcceeecCCccc-----c--cc--C--ccccccchhHHHHHHH
Q psy6090 331 DQKQQLVLELQQL-G---YYVAMCGDGANDCGALRAAHAGISLSEAESS-----V--AS--P--FTSTVANISCVLRIIR 395 (674)
Q Consensus 331 ~qK~~iV~~lq~~-g---~~V~m~GDG~ND~~aLk~AdvGIams~aeas-----v--AA--d--f~s~~~~i~~V~~~I~ 395 (674)
.+|...|+.+++. + ..|++|||+.||.+||..++-||.++|+... . +. + +....+.-.+|.+.|+
T Consensus 164 a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~~~~~vvV~Na~~e~~~~~~~~~~~~~~iy~a~~~~a~GIlegl~ 243 (247)
T PF05116_consen 164 ASKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEGGDHGVVVGNAQPELLSWLLEKLRQQERIYFAQGPYAAGILEGLQ 243 (247)
T ss_dssp -SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCCSSEEEE-TTS-HHHHHHHHHCC-TTE--EE-SS-THHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcCcCCEEEEcCCCHHHHHHHHHhcccCCceEecCCCCcHHHHHHHH
Confidence 4799999999875 3 4688899999999999999999999999877 2 11 1 4555666677777765
Q ss_pred H
Q psy6090 396 E 396 (674)
Q Consensus 396 e 396 (674)
+
T Consensus 244 ~ 244 (247)
T PF05116_consen 244 H 244 (247)
T ss_dssp H
T ss_pred H
Confidence 3
No 83
>PLN02954 phosphoserine phosphatase
Probab=97.34 E-value=0.0008 Score=67.72 Aligned_cols=41 Identities=29% Similarity=0.400 Sum_probs=39.0
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCCC
Q psy6090 200 RLKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKECGII 240 (674)
Q Consensus 200 ~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~gi~ 240 (674)
++.|++.++++.|++.|+++.++||.....+..+++.+|+.
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~ 124 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIP 124 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCC
Confidence 58899999999999999999999999999999999999994
No 84
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=97.32 E-value=0.0019 Score=76.65 Aligned_cols=61 Identities=18% Similarity=0.204 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHc--CCEEEEeCCCccchhhhhhC---CcceeecCCccccccCccccccchhHHHHHHH
Q psy6090 331 DQKQQLVLELQQL--GYYVAMCGDGANDCGALRAA---HAGISLSEAESSVASPFTSTVANISCVLRIIR 395 (674)
Q Consensus 331 ~qK~~iV~~lq~~--g~~V~m~GDG~ND~~aLk~A---dvGIams~aeasvAAdf~s~~~~i~~V~~~I~ 395 (674)
-+|...++.+.+. ...|+++||+.||.+|++.+ +.||+|+++ .-+|.+.+.++ +.|..+|+
T Consensus 656 vnKG~al~~ll~~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~~--~s~A~~~l~~~--~eV~~~L~ 721 (726)
T PRK14501 656 VNKGRAVRRLLEAGPYDFVLAIGDDTTDEDMFRALPETAITVKVGPG--ESRARYRLPSQ--REVRELLR 721 (726)
T ss_pred CCHHHHHHHHHhcCCCCEEEEECCCCChHHHHHhcccCceEEEECCC--CCcceEeCCCH--HHHHHHHH
Confidence 4799999999874 25899999999999999996 578888774 33566776654 44655554
No 85
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=97.22 E-value=0.0026 Score=64.11 Aligned_cols=44 Identities=27% Similarity=0.353 Sum_probs=41.4
Q ss_pred ccCCCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCCCC
Q psy6090 198 ENRLKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKECGIID 241 (674)
Q Consensus 198 en~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~gi~~ 241 (674)
+.++-|++.+++..|+++|++..++|+++...+..+.+..|+..
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~ 130 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLAD 130 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCcc
Confidence 56789999999999999999999999999999999999999954
No 86
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=97.11 E-value=0.0022 Score=63.69 Aligned_cols=42 Identities=21% Similarity=0.313 Sum_probs=38.6
Q ss_pred cCCCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCCC
Q psy6090 199 NRLKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKECGII 240 (674)
Q Consensus 199 n~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~gi~ 240 (674)
-++.|++.++|+.|+++|+++.++||.+...+..+.+..|+.
T Consensus 74 ~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~ 115 (205)
T TIGR01454 74 VEVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLL 115 (205)
T ss_pred cccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCCh
Confidence 368999999999999999999999999988888888889984
No 87
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=96.87 E-value=0.0039 Score=62.04 Aligned_cols=42 Identities=14% Similarity=0.256 Sum_probs=38.9
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCCCC
Q psy6090 200 RLKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKECGIID 241 (674)
Q Consensus 200 ~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~gi~~ 241 (674)
++.|++.++++.|++.|+++.++|+.+...+..+.+..|+..
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~ 126 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAK 126 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHh
Confidence 689999999999999999999999999999999999999853
No 88
>PRK11590 hypothetical protein; Provisional
Probab=96.75 E-value=0.01 Score=59.34 Aligned_cols=108 Identities=12% Similarity=0.012 Sum_probs=74.5
Q ss_pred CCCcchHHHH-HHHHhcCCeEEEEcCCCHhhHHHHHHHcCCCCCCCeEEEEeCCCCCCCCCCceEEEEcCcchhhhhhhh
Q psy6090 200 RLKPQTEGVI-KELKDARVKVVMITGDNIQTAISVAKECGIIDPGETVVDVSAVPGGLKECPKVYFTVSGVSAIQTKAKK 278 (674)
Q Consensus 200 ~lk~~t~~~I-~~L~~agIrvvmiTGDn~~TA~~vA~~~gi~~~~~~vi~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 278 (674)
.+.|++.+.| +.+++.|++++++|+-....+..+++..|+.. ...++..+.
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~-~~~~i~t~l--------------------------- 146 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLP-RVNLIASQM--------------------------- 146 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccc-cCceEEEEE---------------------------
Confidence 5689999999 57899999999999999999999999999732 233432110
Q ss_pred ccCCchhhhhccCCCCeEEEEcchhHHHHHhhCchhHHHHHhhccEEEecCHHHHHHHHHHHHH-cCCEEEEeCCCccch
Q psy6090 279 LNYSKTEEELGLSSGAYKFAVTGKSWELIRDQMPELIPRIIVKGAIFARMSSDQKQQLVLELQQ-LGYYVAMCGDGANDC 357 (674)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~l~itG~~~~~i~~~~~~~~~~i~~~~~VfaR~sP~qK~~iV~~lq~-~g~~V~m~GDG~ND~ 357 (674)
....+|+. .-..+..+.|..-++..-. ......+-||+.||.
T Consensus 147 -----------------~~~~tg~~--------------------~g~~c~g~~K~~~l~~~~~~~~~~~~aY~Ds~~D~ 189 (211)
T PRK11590 147 -----------------QRRYGGWV--------------------LTLRCLGHEKVAQLERKIGTPLRLYSGYSDSKQDN 189 (211)
T ss_pred -----------------EEEEccEE--------------------CCccCCChHHHHHHHHHhCCCcceEEEecCCcccH
Confidence 00112211 0112455677766654422 223456889999999
Q ss_pred hhhhhCCcceeecCC
Q psy6090 358 GALRAAHAGISLSEA 372 (674)
Q Consensus 358 ~aLk~AdvGIams~a 372 (674)
+||+.|+-++++...
T Consensus 190 pmL~~a~~~~~vnp~ 204 (211)
T PRK11590 190 PLLYFCQHRWRVTPR 204 (211)
T ss_pred HHHHhCCCCEEECcc
Confidence 999999999998753
No 89
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=96.75 E-value=0.0073 Score=60.43 Aligned_cols=107 Identities=14% Similarity=0.110 Sum_probs=73.0
Q ss_pred CCCcchHHHHH-HHHhcCCeEEEEcCCCHhhHHHHHHHcCCCCCCCeEEEEeCCCCCCCCCCceEEEEcCcchhhhhhhh
Q psy6090 200 RLKPQTEGVIK-ELKDARVKVVMITGDNIQTAISVAKECGIIDPGETVVDVSAVPGGLKECPKVYFTVSGVSAIQTKAKK 278 (674)
Q Consensus 200 ~lk~~t~~~I~-~L~~agIrvvmiTGDn~~TA~~vA~~~gi~~~~~~vi~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 278 (674)
.+.|++.++|+ .+++.|++++++|+-+...+..+|+..++... ..++..+ .+..
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~-~~~i~t~-le~~----------------------- 148 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHR-LNLIASQ-IERG----------------------- 148 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhcccccc-CcEEEEE-eEEe-----------------------
Confidence 57999999996 78999999999999999999999999776542 2333211 0000
Q ss_pred ccCCchhhhhccCCCCeEEEEcchhHHHHHhhCchhHHHHHhhccEEEecCHHHHHHHHHHHHHcC-CEEEEeCCCccch
Q psy6090 279 LNYSKTEEELGLSSGAYKFAVTGKSWELIRDQMPELIPRIIVKGAIFARMSSDQKQQLVLELQQLG-YYVAMCGDGANDC 357 (674)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~l~itG~~~~~i~~~~~~~~~~i~~~~~VfaR~sP~qK~~iV~~lq~~g-~~V~m~GDG~ND~ 357 (674)
.|.. ..-..+..++|..-++..-... ....+-||+.||.
T Consensus 149 ---------------------~gg~-------------------~~g~~c~g~~Kv~rl~~~~~~~~~~~~aYsDS~~D~ 188 (210)
T TIGR01545 149 ---------------------NGGW-------------------VLPLRCLGHEKVAQLEQKIGSPLKLYSGYSDSKQDN 188 (210)
T ss_pred ---------------------CCce-------------------EcCccCCChHHHHHHHHHhCCChhheEEecCCcccH
Confidence 0000 0011244567766555433212 3456889999999
Q ss_pred hhhhhCCcceeecC
Q psy6090 358 GALRAAHAGISLSE 371 (674)
Q Consensus 358 ~aLk~AdvGIams~ 371 (674)
+||+.||-++++..
T Consensus 189 pmL~~a~~~~~Vnp 202 (210)
T TIGR01545 189 PLLAFCEHRWRVSK 202 (210)
T ss_pred HHHHhCCCcEEECc
Confidence 99999999999875
No 90
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=96.69 E-value=0.016 Score=55.14 Aligned_cols=34 Identities=15% Similarity=0.308 Sum_probs=31.5
Q ss_pred ccCCCcchHHHHHHHHhcCCeEEEEcCCCHhhHH
Q psy6090 198 ENRLKPQTEGVIKELKDARVKVVMITGDNIQTAI 231 (674)
Q Consensus 198 en~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~ 231 (674)
++.+.|++.+++++++++|++++++||+....+.
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~ 58 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQAD 58 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHH
Confidence 4678999999999999999999999999998874
No 91
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=96.67 E-value=0.005 Score=61.95 Aligned_cols=43 Identities=14% Similarity=0.166 Sum_probs=39.6
Q ss_pred cCCCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCCCC
Q psy6090 199 NRLKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKECGIID 241 (674)
Q Consensus 199 n~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~gi~~ 241 (674)
.++-|++.++|+.|++.|+++.++||.....+..+.+..|+..
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~ 133 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRD 133 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchh
Confidence 5788999999999999999999999999999999999999853
No 92
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=96.64 E-value=0.0086 Score=62.40 Aligned_cols=42 Identities=19% Similarity=0.206 Sum_probs=38.1
Q ss_pred cCCCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCCC
Q psy6090 199 NRLKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKECGII 240 (674)
Q Consensus 199 n~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~gi~ 240 (674)
.++.|++.++|+.|+++|+++.++||.+...+..+....|+-
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~ 141 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIG 141 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcH
Confidence 468899999999999999999999999998888888888874
No 93
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=96.54 E-value=0.0081 Score=59.22 Aligned_cols=49 Identities=24% Similarity=0.354 Sum_probs=40.8
Q ss_pred eeeeeehhccCCCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCCC
Q psy6090 190 EFLGLIILENRLKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKECGII 240 (674)
Q Consensus 190 ~flGli~~en~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~gi~ 240 (674)
.+.|+.. +++.+...++|+.|++.|+++.++||.+...+..+.+.+|+.
T Consensus 98 ~~~~~~~--~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~ 146 (197)
T TIGR01548 98 ATLGLIE--DETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLE 146 (197)
T ss_pred cchhhhc--cccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCch
Confidence 3444433 446677799999999999999999999999999999999985
No 94
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=96.54 E-value=0.0068 Score=60.52 Aligned_cols=41 Identities=20% Similarity=0.061 Sum_probs=38.2
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCCC
Q psy6090 200 RLKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKECGII 240 (674)
Q Consensus 200 ~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~gi~ 240 (674)
++-|++.++++.|+++|+++.++||.....+..+.+..|+.
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~ 122 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLD 122 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCh
Confidence 47899999999999999999999999999999999999985
No 95
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=96.49 E-value=0.012 Score=59.57 Aligned_cols=42 Identities=19% Similarity=0.142 Sum_probs=37.9
Q ss_pred cCCCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCCC
Q psy6090 199 NRLKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKECGII 240 (674)
Q Consensus 199 n~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~gi~ 240 (674)
-++.|++.++++.|++.|+++.++|+.+...+..+.+..|+.
T Consensus 94 ~~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~ 135 (229)
T PRK13226 94 SQLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWE 135 (229)
T ss_pred CeeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCch
Confidence 468999999999999999999999999988888888888874
No 96
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=96.46 E-value=0.013 Score=60.82 Aligned_cols=48 Identities=19% Similarity=0.275 Sum_probs=42.9
Q ss_pred cCCCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCCCCCCCeE
Q psy6090 199 NRLKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKECGIIDPGETV 246 (674)
Q Consensus 199 n~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~gi~~~~~~v 246 (674)
-+++|++.+.++.|++.|+++.++||-....+..+.++.|+......+
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~I 167 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKV 167 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceE
Confidence 468999999999999999999999999999999999999987555444
No 97
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=96.38 E-value=0.026 Score=57.74 Aligned_cols=67 Identities=18% Similarity=0.169 Sum_probs=46.4
Q ss_pred EecCHHHHHHHHHHHHHc-C---CEEEEeCCCccchhhhhhC--------CcceeecCCccccccCccccccchhHHHHH
Q psy6090 326 ARMSSDQKQQLVLELQQL-G---YYVAMCGDGANDCGALRAA--------HAGISLSEAESSVASPFTSTVANISCVLRI 393 (674)
Q Consensus 326 aR~sP~qK~~iV~~lq~~-g---~~V~m~GDG~ND~~aLk~A--------dvGIams~aeasvAAdf~s~~~~i~~V~~~ 393 (674)
.+-.+.+|...++.+.+. + ..++|+||+.||..|++.+ ..||+++..+..-.|+++.. +.+.|.+.
T Consensus 161 ~~p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g~~~~~A~~~~~--~~~~v~~~ 238 (244)
T TIGR00685 161 LKPRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSGSKKTVAKFHLT--GPQQVLEF 238 (244)
T ss_pred EeeCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecCCcCCCceEeCC--CHHHHHHH
Confidence 344556899888887654 3 4799999999999999999 47777853333335667655 44445555
Q ss_pred H
Q psy6090 394 I 394 (674)
Q Consensus 394 I 394 (674)
+
T Consensus 239 L 239 (244)
T TIGR00685 239 L 239 (244)
T ss_pred H
Confidence 4
No 98
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=96.29 E-value=0.009 Score=60.71 Aligned_cols=41 Identities=17% Similarity=0.149 Sum_probs=36.5
Q ss_pred cCCCcchHHHHHHHHhcCCeEEEEcCCC----HhhHHHHHHHcCC
Q psy6090 199 NRLKPQTEGVIKELKDARVKVVMITGDN----IQTAISVAKECGI 239 (674)
Q Consensus 199 n~lk~~t~~~I~~L~~agIrvvmiTGDn----~~TA~~vA~~~gi 239 (674)
-.+.|++.+.|+.|++.|+++.++||+. ..|+..+.+..|+
T Consensus 113 a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gi 157 (237)
T PRK11009 113 SIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHI 157 (237)
T ss_pred CcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCC
Confidence 4578889999999999999999999975 5588889888998
No 99
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=96.16 E-value=0.019 Score=59.78 Aligned_cols=41 Identities=12% Similarity=0.268 Sum_probs=38.7
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCCC
Q psy6090 200 RLKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKECGII 240 (674)
Q Consensus 200 ~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~gi~ 240 (674)
++.|++.++++.|++.|+++.++|+.+...+..+.+.+|+.
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~ 182 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLR 182 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCh
Confidence 67899999999999999999999999999999999999984
No 100
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=96.14 E-value=0.023 Score=56.87 Aligned_cols=42 Identities=24% Similarity=0.320 Sum_probs=39.4
Q ss_pred cCCCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCCC
Q psy6090 199 NRLKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKECGII 240 (674)
Q Consensus 199 n~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~gi~ 240 (674)
.++.|++.+.|+.|++.|+++.++||-....+..+.+..|+.
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~ 127 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWT 127 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhh
Confidence 479999999999999999999999999999999999999985
No 101
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=96.09 E-value=0.016 Score=61.20 Aligned_cols=45 Identities=13% Similarity=0.199 Sum_probs=41.7
Q ss_pred hhccCCCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCCC
Q psy6090 196 ILENRLKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKECGII 240 (674)
Q Consensus 196 ~~en~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~gi~ 240 (674)
..++++.|++.++|+.|++.|++++++||+...++..+.+.+|+.
T Consensus 183 ~~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~ 227 (300)
T PHA02530 183 VKEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQT 227 (300)
T ss_pred cccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHc
Confidence 356789999999999999999999999999999999999999884
No 102
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=96.07 E-value=0.01 Score=60.30 Aligned_cols=41 Identities=17% Similarity=0.137 Sum_probs=36.3
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCC----CHhhHHHHHHHcCCC
Q psy6090 200 RLKPQTEGVIKELKDARVKVVMITGD----NIQTAISVAKECGII 240 (674)
Q Consensus 200 ~lk~~t~~~I~~L~~agIrvvmiTGD----n~~TA~~vA~~~gi~ 240 (674)
.+++.+.+.|+.|++.|+++.++|++ ...++..+.+..|+.
T Consensus 114 ~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~ 158 (237)
T TIGR01672 114 IPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIP 158 (237)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCc
Confidence 35566999999999999999999998 667899999999994
No 103
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=96.00 E-value=0.025 Score=53.89 Aligned_cols=112 Identities=12% Similarity=0.141 Sum_probs=71.0
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCCCCCCCeEEEEeCCCCCCCCCCceEEEEcCcchhhhhhhhc
Q psy6090 200 RLKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKECGIIDPGETVVDVSAVPGGLKECPKVYFTVSGVSAIQTKAKKL 279 (674)
Q Consensus 200 ~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~gi~~~~~~vi~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 279 (674)
+++|+-++.++.+++.+|+++++||-.---...+-...+= .+.+..++....+..-
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivg---ke~i~~idi~sn~~~i--------------------- 128 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVG---KERIYCIDIVSNNDYI--------------------- 128 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhcc---ccceeeeEEeecCceE---------------------
Confidence 5899999999999999999999998776665555544331 1122222211111000
Q ss_pred cCCchhhhhccCCCCeEEEEcchhHHHHHhhCchhHHHHHhhccEEEecCHHHHHHHHHHHHHcCCEEEEeCCCccchhh
Q psy6090 280 NYSKTEEELGLSSGAYKFAVTGKSWELIRDQMPELIPRIIVKGAIFARMSSDQKQQLVLELQQLGYYVAMCGDGANDCGA 359 (674)
Q Consensus 280 ~~~~~~~~~~~~~~~~~l~itG~~~~~i~~~~~~~~~~i~~~~~VfaR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~a 359 (674)
..+.-+.++..+. ..| ...|...|+.+++..+.+.|||||.-|..|
T Consensus 129 -----------h~dg~h~i~~~~d-------------------s~f----G~dK~~vI~~l~e~~e~~fy~GDsvsDlsa 174 (220)
T COG4359 129 -----------HIDGQHSIKYTDD-------------------SQF----GHDKSSVIHELSEPNESIFYCGDSVSDLSA 174 (220)
T ss_pred -----------cCCCceeeecCCc-------------------ccc----CCCcchhHHHhhcCCceEEEecCCcccccH
Confidence 0000000110000 111 246888999999999999999999999999
Q ss_pred hhhCCcceee
Q psy6090 360 LRAAHAGISL 369 (674)
Q Consensus 360 Lk~AdvGIam 369 (674)
-|.+|+-.|=
T Consensus 175 aklsDllFAK 184 (220)
T COG4359 175 AKLSDLLFAK 184 (220)
T ss_pred hhhhhhHhhH
Confidence 9988887763
No 104
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=95.93 E-value=0.032 Score=57.32 Aligned_cols=42 Identities=24% Similarity=0.181 Sum_probs=38.7
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCCCC
Q psy6090 200 RLKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKECGIID 241 (674)
Q Consensus 200 ~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~gi~~ 241 (674)
++.|++.++|+.|+++|+++.++||.....+..+.+..|+..
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~ 140 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQG 140 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcC
Confidence 578999999999999999999999999999999999999854
No 105
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=95.83 E-value=0.072 Score=53.76 Aligned_cols=43 Identities=14% Similarity=0.203 Sum_probs=37.7
Q ss_pred cCCCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCCCC
Q psy6090 199 NRLKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKECGIID 241 (674)
Q Consensus 199 n~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~gi~~ 241 (674)
-++.|++.+.++.|++.|+++.++|+-+...+....+..|+.+
T Consensus 92 ~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~ 134 (224)
T PRK14988 92 AVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDA 134 (224)
T ss_pred CCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHH
Confidence 4688999999999999999999999988888887777788753
No 106
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=95.77 E-value=0.04 Score=56.51 Aligned_cols=43 Identities=16% Similarity=0.061 Sum_probs=39.5
Q ss_pred cCCCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCCCC
Q psy6090 199 NRLKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKECGIID 241 (674)
Q Consensus 199 n~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~gi~~ 241 (674)
-++.|++.++++.|++.|+++.++|+-....+....+..|+..
T Consensus 107 ~~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~ 149 (248)
T PLN02770 107 LKPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSD 149 (248)
T ss_pred CCcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChh
Confidence 3578999999999999999999999999999999999999854
No 107
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=95.77 E-value=0.045 Score=53.79 Aligned_cols=41 Identities=15% Similarity=0.288 Sum_probs=37.5
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCCC
Q psy6090 200 RLKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKECGII 240 (674)
Q Consensus 200 ~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~gi~ 240 (674)
++.|++.++|++|++.|+++.++|+-+...+....+.+|+.
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~ 132 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLD 132 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCCh
Confidence 57899999999999999999999999888888888889974
No 108
>PLN02423 phosphomannomutase
Probab=95.71 E-value=0.066 Score=54.86 Aligned_cols=39 Identities=21% Similarity=0.228 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHcCCEEEEeCC----Cccchhhhhh-CCcceeecC
Q psy6090 332 QKQQLVLELQQLGYYVAMCGD----GANDCGALRA-AHAGISLSE 371 (674)
Q Consensus 332 qK~~iV~~lq~~g~~V~m~GD----G~ND~~aLk~-AdvGIams~ 371 (674)
+|+..++.|+ ....|+++|| |.||.+||+. -=.|+.+.+
T Consensus 189 nKg~al~~L~-~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~ 232 (245)
T PLN02423 189 DKTYCLQFLE-DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTS 232 (245)
T ss_pred CHHHHHHHhc-CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCC
Confidence 7999999999 6679999999 8999999996 666787765
No 109
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=95.64 E-value=0.034 Score=56.35 Aligned_cols=42 Identities=14% Similarity=0.309 Sum_probs=38.2
Q ss_pred CCCcchHHHHHHH--HhcCCeEEEEcCCCHhhHHHHHHHcCCCC
Q psy6090 200 RLKPQTEGVIKEL--KDARVKVVMITGDNIQTAISVAKECGIID 241 (674)
Q Consensus 200 ~lk~~t~~~I~~L--~~agIrvvmiTGDn~~TA~~vA~~~gi~~ 241 (674)
|+-|+.+++++.+ ++.|+.++++|.-|..-...+-+.-|+..
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~ 114 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRD 114 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCcc
Confidence 6789999999999 56899999999999999999999999854
No 110
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=95.62 E-value=0.037 Score=55.30 Aligned_cols=42 Identities=19% Similarity=0.285 Sum_probs=37.7
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCCCC
Q psy6090 200 RLKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKECGIID 241 (674)
Q Consensus 200 ~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~gi~~ 241 (674)
++.|++.++|+.|+++|++++++|+-+...+....+.+|+..
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~ 135 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRD 135 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHH
Confidence 689999999999999999999999998888888888888843
No 111
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=95.60 E-value=0.047 Score=56.49 Aligned_cols=42 Identities=14% Similarity=0.294 Sum_probs=38.9
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCCCC
Q psy6090 200 RLKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKECGIID 241 (674)
Q Consensus 200 ~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~gi~~ 241 (674)
++.|++.++|+.|++.|+++.++|+.....+..+.+.+|+.+
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~ 150 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEG 150 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHh
Confidence 578999999999999999999999999999999999999854
No 112
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=95.48 E-value=0.027 Score=54.57 Aligned_cols=40 Identities=20% Similarity=0.434 Sum_probs=32.4
Q ss_pred cCCCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCCC
Q psy6090 199 NRLKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKECGII 240 (674)
Q Consensus 199 n~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~gi~ 240 (674)
.++.|++.++|+.|+++|+++.++|+... +..+.+..|+.
T Consensus 86 ~~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~ 125 (185)
T TIGR01990 86 ADVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLI 125 (185)
T ss_pred cccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcH
Confidence 36889999999999999999999997532 34567777774
No 113
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=95.45 E-value=0.036 Score=52.50 Aligned_cols=44 Identities=14% Similarity=0.234 Sum_probs=40.4
Q ss_pred hccCCCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCCC
Q psy6090 197 LENRLKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKECGII 240 (674)
Q Consensus 197 ~en~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~gi~ 240 (674)
-..++.|++.++|++|++.|++++++|+.+......+.+..|+.
T Consensus 74 ~~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~ 117 (176)
T PF13419_consen 74 SKLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLD 117 (176)
T ss_dssp GGEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHG
T ss_pred hccchhhhhhhhhhhcccccceeEEeecCCcccccccccccccc
Confidence 44568999999999999999999999999999999999999986
No 114
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=95.34 E-value=0.055 Score=56.12 Aligned_cols=41 Identities=20% Similarity=0.105 Sum_probs=36.9
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCCC
Q psy6090 200 RLKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKECGII 240 (674)
Q Consensus 200 ~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~gi~ 240 (674)
++.|++.++|+.|++.|+++.++||.....+..+.+..|+.
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~ 141 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQ 141 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhc
Confidence 57899999999999999999999999998888887877764
No 115
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=95.34 E-value=0.067 Score=64.25 Aligned_cols=46 Identities=13% Similarity=0.166 Sum_probs=35.7
Q ss_pred CCCcchHHHHHHH-HhcCCeEEEEcCCCHhhHHHHHHH---cCCCCCCCe
Q psy6090 200 RLKPQTEGVIKEL-KDARVKVVMITGDNIQTAISVAKE---CGIIDPGET 245 (674)
Q Consensus 200 ~lk~~t~~~I~~L-~~agIrvvmiTGDn~~TA~~vA~~---~gi~~~~~~ 245 (674)
.+.+++.++|++| ++.|+.++++||+...+....... ++++..+..
T Consensus 616 ~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~~~~l~laaEHG~ 665 (854)
T PLN02205 616 SPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPCEKLGIAAEHGY 665 (854)
T ss_pred CCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCCCCCeEEEEeCCE
Confidence 5667899999997 778999999999999998877644 345444443
No 116
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=95.22 E-value=0.1 Score=50.12 Aligned_cols=42 Identities=19% Similarity=0.316 Sum_probs=34.9
Q ss_pred cCCCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCCCC
Q psy6090 199 NRLKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKECGIID 241 (674)
Q Consensus 199 n~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~gi~~ 241 (674)
-++.|++.++++.|++.|+++.++|+-.... ..+..++|+..
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~ 125 (183)
T TIGR01509 84 LKPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRD 125 (183)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHH
Confidence 3688999999999999999999999988777 55555588753
No 117
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=94.97 E-value=0.6 Score=46.12 Aligned_cols=37 Identities=27% Similarity=0.384 Sum_probs=33.4
Q ss_pred chHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCCC
Q psy6090 204 QTEGVIKELKDARVKVVMITGDNIQTAISVAKECGII 240 (674)
Q Consensus 204 ~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~gi~ 240 (674)
.+.+++.+|+++|++|+.+|.-........-+++|.-
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 6789999999999999999998888888888889875
No 118
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=94.93 E-value=0.048 Score=49.88 Aligned_cols=41 Identities=29% Similarity=0.417 Sum_probs=36.0
Q ss_pred cCCCcchHHHHHHHHhcCCeEEEEcCCC--------HhhHHHHHHHcCC
Q psy6090 199 NRLKPQTEGVIKELKDARVKVVMITGDN--------IQTAISVAKECGI 239 (674)
Q Consensus 199 n~lk~~t~~~I~~L~~agIrvvmiTGDn--------~~TA~~vA~~~gi 239 (674)
.++.|++.++++.|+++|+++.++|+.. ...+..+.+.+|+
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l 72 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGV 72 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCC
Confidence 3578999999999999999999999998 6667777888887
No 119
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=94.91 E-value=0.045 Score=52.93 Aligned_cols=40 Identities=20% Similarity=0.306 Sum_probs=34.4
Q ss_pred cCCCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCCC
Q psy6090 199 NRLKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKECGII 240 (674)
Q Consensus 199 n~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~gi~ 240 (674)
-++.|++.++|+.|+++|+++.++|+. ..+..+.+.+|+.
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~ 126 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLT 126 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChH
Confidence 468999999999999999999999987 5566777788874
No 120
>PRK11587 putative phosphatase; Provisional
Probab=94.83 E-value=0.1 Score=52.22 Aligned_cols=40 Identities=15% Similarity=0.292 Sum_probs=33.9
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCC
Q psy6090 200 RLKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKECGI 239 (674)
Q Consensus 200 ~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~gi 239 (674)
++.|++.++|+.|+++|+++.++|+.+...+...-+..|+
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l 122 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGL 122 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCC
Confidence 5789999999999999999999999877666555566666
No 121
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=94.68 E-value=0.17 Score=49.01 Aligned_cols=51 Identities=18% Similarity=0.087 Sum_probs=43.4
Q ss_pred eeeeeehhccCCCcchHHHHHHHHhcCCeEEEEcCC-CHhhHHHHHHHcCCC
Q psy6090 190 EFLGLIILENRLKPQTEGVIKELKDARVKVVMITGD-NIQTAISVAKECGII 240 (674)
Q Consensus 190 ~flGli~~en~lk~~t~~~I~~L~~agIrvvmiTGD-n~~TA~~vA~~~gi~ 240 (674)
+......-+-++.|++.++++.|+++|+++.++|+- ....+..+....|+.
T Consensus 35 ~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~ 86 (174)
T TIGR01685 35 IIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEIT 86 (174)
T ss_pred eEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcC
Confidence 345556666778999999999999999999999976 888888888888884
No 122
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=94.64 E-value=0.13 Score=55.89 Aligned_cols=43 Identities=14% Similarity=0.253 Sum_probs=39.7
Q ss_pred cCCCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCCCC
Q psy6090 199 NRLKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKECGIID 241 (674)
Q Consensus 199 n~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~gi~~ 241 (674)
-++.|++.+.|+.|+++|+++.++|+.+...+..+-+..||..
T Consensus 215 ~~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~ 257 (381)
T PLN02575 215 YRLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRG 257 (381)
T ss_pred CCcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHH
Confidence 4678999999999999999999999999999999999999853
No 123
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=94.57 E-value=0.055 Score=60.80 Aligned_cols=43 Identities=7% Similarity=0.159 Sum_probs=39.7
Q ss_pred cCCCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCCCC
Q psy6090 199 NRLKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKECGIID 241 (674)
Q Consensus 199 n~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~gi~~ 241 (674)
-++.|++.++|+.|++.|+++.++|+.....+..+.+.+|+.+
T Consensus 329 ~~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~ 371 (459)
T PRK06698 329 GALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQ 371 (459)
T ss_pred CCcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHh
Confidence 3688999999999999999999999999999999999999853
No 124
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=94.49 E-value=0.15 Score=53.48 Aligned_cols=39 Identities=18% Similarity=0.221 Sum_probs=33.6
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcC
Q psy6090 200 RLKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKECG 238 (674)
Q Consensus 200 ~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~g 238 (674)
++.|++.+.|+.|++.|+++.++|+-+......+-+..+
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~ 182 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLL 182 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhc
Confidence 689999999999999999999999988877776655543
No 125
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=94.15 E-value=0.17 Score=49.10 Aligned_cols=27 Identities=30% Similarity=0.314 Sum_probs=25.1
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCC
Q psy6090 200 RLKPQTEGVIKELKDARVKVVMITGDN 226 (674)
Q Consensus 200 ~lk~~t~~~I~~L~~agIrvvmiTGDn 226 (674)
.+.|++.++|++|+++|+++.++|..+
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~ 55 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQS 55 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCc
Confidence 478999999999999999999999876
No 126
>PLN03017 trehalose-phosphatase
Probab=94.09 E-value=0.72 Score=49.78 Aligned_cols=62 Identities=19% Similarity=0.234 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHc-C------CEEEEeCCCccchhhhhhC-----CcceeecCCccccccCccccccchhHHHHHH
Q psy6090 331 DQKQQLVLELQQL-G------YYVAMCGDGANDCGALRAA-----HAGISLSEAESSVASPFTSTVANISCVLRII 394 (674)
Q Consensus 331 ~qK~~iV~~lq~~-g------~~V~m~GDG~ND~~aLk~A-----dvGIams~aeasvAAdf~s~~~~i~~V~~~I 394 (674)
-+|...++.+.+. | ..++++||-..|-.|++.. ++||.++.....-+|.|.+. +.+.|...|
T Consensus 282 ~dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~VG~~~k~T~A~y~L~--dp~eV~~fL 355 (366)
T PLN03017 282 WDKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILVSKFPKDTDASYSLQ--DPSEVMDFL 355 (366)
T ss_pred CCHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEECCCCCCCcceEeCC--CHHHHHHHH
Confidence 4899999988763 2 3689999999999999865 46777775333345667653 455565555
No 127
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=94.06 E-value=0.16 Score=50.14 Aligned_cols=40 Identities=13% Similarity=0.311 Sum_probs=33.0
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCCC
Q psy6090 200 RLKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKECGII 240 (674)
Q Consensus 200 ~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~gi~ 240 (674)
++-|++.++++.|+++|+++.++|+-... +..+.+.+|+.
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~ 144 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLL 144 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcH
Confidence 67899999999999999999999976543 45666777774
No 128
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=93.93 E-value=0.16 Score=47.56 Aligned_cols=40 Identities=18% Similarity=0.318 Sum_probs=34.5
Q ss_pred ccCCCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHc
Q psy6090 198 ENRLKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKEC 237 (674)
Q Consensus 198 en~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~ 237 (674)
+....+++.+.++.|++.|+++.++|+.....+....+..
T Consensus 62 ~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~ 101 (154)
T TIGR01549 62 EEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH 101 (154)
T ss_pred hheeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH
Confidence 3345689999999999999999999999999888877765
No 129
>PRK06769 hypothetical protein; Validated
Probab=93.68 E-value=0.18 Score=48.80 Aligned_cols=28 Identities=25% Similarity=0.345 Sum_probs=25.4
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCH
Q psy6090 200 RLKPQTEGVIKELKDARVKVVMITGDNI 227 (674)
Q Consensus 200 ~lk~~t~~~I~~L~~agIrvvmiTGDn~ 227 (674)
++.|++.++|++|++.|+++.++|+.+.
T Consensus 28 ~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~ 55 (173)
T PRK06769 28 TLFPFTKASLQKLKANHIKIFSFTNQPG 55 (173)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEECCch
Confidence 3789999999999999999999998763
No 130
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=93.67 E-value=0.18 Score=47.19 Aligned_cols=41 Identities=20% Similarity=0.370 Sum_probs=32.9
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCH---------------hhHHHHHHHcCCC
Q psy6090 200 RLKPQTEGVIKELKDARVKVVMITGDNI---------------QTAISVAKECGII 240 (674)
Q Consensus 200 ~lk~~t~~~I~~L~~agIrvvmiTGDn~---------------~TA~~vA~~~gi~ 240 (674)
++.|++.++++.|++.|+++.++|+.+. ..+..+.+.+|+.
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~ 82 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVA 82 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCc
Confidence 5789999999999999999999998652 3344566777773
No 131
>PLN02940 riboflavin kinase
Probab=93.65 E-value=0.16 Score=55.69 Aligned_cols=42 Identities=17% Similarity=0.167 Sum_probs=35.4
Q ss_pred cCCCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHH-HcCCC
Q psy6090 199 NRLKPQTEGVIKELKDARVKVVMITGDNIQTAISVAK-ECGII 240 (674)
Q Consensus 199 n~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~-~~gi~ 240 (674)
-++.|++.++++.|++.|+++.++|+.....+....+ ..|+.
T Consensus 92 ~~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~ 134 (382)
T PLN02940 92 IKALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWK 134 (382)
T ss_pred CCCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChH
Confidence 3578999999999999999999999998887776654 56764
No 132
>PLN02580 trehalose-phosphatase
Probab=93.56 E-value=0.13 Score=55.83 Aligned_cols=63 Identities=21% Similarity=0.186 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHHc-C---C---EEEEeCCCccchhhhhh-----CCcceeecCCccccccCccccccchhHHHHHHH
Q psy6090 331 DQKQQLVLELQQL-G---Y---YVAMCGDGANDCGALRA-----AHAGISLSEAESSVASPFTSTVANISCVLRIIR 395 (674)
Q Consensus 331 ~qK~~iV~~lq~~-g---~---~V~m~GDG~ND~~aLk~-----AdvGIams~aeasvAAdf~s~~~~i~~V~~~I~ 395 (674)
-+|...|+.+.+. | . .++++||+.||-.|++. +++||+|+++....+|.|.+.+ .+.|...|+
T Consensus 300 ~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vgn~~~~t~A~y~L~d--p~eV~~~L~ 374 (384)
T PLN02580 300 WNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVSSVPKESNAFYSLRD--PSEVMEFLK 374 (384)
T ss_pred CCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEecCCCCccceEEcCC--HHHHHHHHH
Confidence 4899999888764 3 1 25899999999999996 6899999987777778776554 455555553
No 133
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=93.55 E-value=0.34 Score=48.29 Aligned_cols=42 Identities=14% Similarity=0.326 Sum_probs=37.6
Q ss_pred cCCCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCCCC
Q psy6090 199 NRLKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKECGIID 241 (674)
Q Consensus 199 n~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~gi~~ 241 (674)
-++.|++.++|+.|++. ++++++|+-....+..+.+..|+..
T Consensus 96 ~~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~ 137 (224)
T TIGR02254 96 HQLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFP 137 (224)
T ss_pred CeeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHh
Confidence 36889999999999999 9999999998888888889999854
No 134
>KOG3120|consensus
Probab=93.52 E-value=0.23 Score=49.03 Aligned_cols=41 Identities=15% Similarity=0.230 Sum_probs=36.9
Q ss_pred CCCcchHHHHHHHHhcCC-eEEEEcCCCHhhHHHHHHHcCCC
Q psy6090 200 RLKPQTEGVIKELKDARV-KVVMITGDNIQTAISVAKECGII 240 (674)
Q Consensus 200 ~lk~~t~~~I~~L~~agI-rvvmiTGDn~~TA~~vA~~~gi~ 240 (674)
|+-|+..++|+.+++.|- .++++|--|..-...+-+..|+.
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~ 125 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIH 125 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHH
Confidence 578999999999999997 99999999999888888888874
No 135
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=93.04 E-value=0.39 Score=49.71 Aligned_cols=43 Identities=9% Similarity=0.148 Sum_probs=34.1
Q ss_pred ccCCCcchHHHHHHHHhcCCeEEEEcCCCHhh---HHHHHHHcCCC
Q psy6090 198 ENRLKPQTEGVIKELKDARVKVVMITGDNIQT---AISVAKECGII 240 (674)
Q Consensus 198 en~lk~~t~~~I~~L~~agIrvvmiTGDn~~T---A~~vA~~~gi~ 240 (674)
+.++-|++.+.++.|++.|+++.++|++.... +....+..|+.
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~ 161 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFP 161 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcC
Confidence 34578999999999999999999999988443 33455667774
No 136
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=92.94 E-value=0.34 Score=46.64 Aligned_cols=40 Identities=33% Similarity=0.412 Sum_probs=34.0
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCC-HhhHHHHHHHcCC
Q psy6090 200 RLKPQTEGVIKELKDARVKVVMITGDN-IQTAISVAKECGI 239 (674)
Q Consensus 200 ~lk~~t~~~I~~L~~agIrvvmiTGDn-~~TA~~vA~~~gi 239 (674)
++-|++.++|+.|++.|++++++|+.+ ...+..+++.+|+
T Consensus 43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl 83 (170)
T TIGR01668 43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGI 83 (170)
T ss_pred CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCC
Confidence 578999999999999999999999987 5666667777776
No 137
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=92.52 E-value=1.2 Score=45.44 Aligned_cols=48 Identities=19% Similarity=0.190 Sum_probs=37.9
Q ss_pred eeehhccCCCcchHHHHHHHHhcCCeEEEEcCCCHhhHH--HHHHHcCCC
Q psy6090 193 GLIILENRLKPQTEGVIKELKDARVKVVMITGDNIQTAI--SVAKECGII 240 (674)
Q Consensus 193 Gli~~en~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~--~vA~~~gi~ 240 (674)
|.+.-.+++-|++.++|+.|+++|+++.++|.-....+. ...+++|+.
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~ 66 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGIN 66 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCC
Confidence 666667788999999999999999999999985443333 456778874
No 138
>PRK09449 dUMP phosphatase; Provisional
Probab=92.50 E-value=0.59 Score=46.78 Aligned_cols=40 Identities=18% Similarity=0.236 Sum_probs=35.1
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCCC
Q psy6090 200 RLKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKECGII 240 (674)
Q Consensus 200 ~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~gi~ 240 (674)
++.|++.++++.|+ +|+++.++|+.....+...-+..|+.
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~ 134 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLR 134 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChH
Confidence 57899999999999 68999999998888887777888874
No 139
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=92.47 E-value=0.26 Score=47.04 Aligned_cols=26 Identities=31% Similarity=0.385 Sum_probs=23.9
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCC
Q psy6090 200 RLKPQTEGVIKELKDARVKVVMITGD 225 (674)
Q Consensus 200 ~lk~~t~~~I~~L~~agIrvvmiTGD 225 (674)
++.|++.++|++|+++|++++++|.-
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~ 54 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQ 54 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCC
Confidence 47899999999999999999999974
No 140
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=92.44 E-value=0.14 Score=48.01 Aligned_cols=43 Identities=14% Similarity=0.069 Sum_probs=38.2
Q ss_pred hccCCCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCCC
Q psy6090 197 LENRLKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKECGII 240 (674)
Q Consensus 197 ~en~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~gi~ 240 (674)
..-+++|++.+.++.|+ .++++.++|.-+...+..+.+.+|+.
T Consensus 42 ~~v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~ 84 (148)
T smart00577 42 VYVKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPK 84 (148)
T ss_pred EEEEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcC
Confidence 44568999999999999 57999999999999999999888874
No 141
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=92.29 E-value=0.31 Score=49.10 Aligned_cols=41 Identities=7% Similarity=0.180 Sum_probs=34.0
Q ss_pred hccCCCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHc
Q psy6090 197 LENRLKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKEC 237 (674)
Q Consensus 197 ~en~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~ 237 (674)
++.++.|++.++|++|+++|+++.++|..+......+.+..
T Consensus 92 ~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~ 132 (220)
T TIGR01691 92 LTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHS 132 (220)
T ss_pred cccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhc
Confidence 45679999999999999999999999988877666555444
No 142
>PLN02811 hydrolase
Probab=92.26 E-value=0.43 Score=47.85 Aligned_cols=33 Identities=18% Similarity=0.393 Sum_probs=28.1
Q ss_pred ccCCCcchHHHHHHHHhcCCeEEEEcCCCHhhH
Q psy6090 198 ENRLKPQTEGVIKELKDARVKVVMITGDNIQTA 230 (674)
Q Consensus 198 en~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA 230 (674)
..++.|++.+.|+.|++.|+++.++||-.....
T Consensus 76 ~~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~ 108 (220)
T PLN02811 76 TSDLMPGAERLVRHLHAKGIPIAIATGSHKRHF 108 (220)
T ss_pred hCCCCccHHHHHHHHHHCCCcEEEEeCCchhhH
Confidence 345789999999999999999999998766533
No 143
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=92.26 E-value=0.36 Score=48.75 Aligned_cols=42 Identities=10% Similarity=0.229 Sum_probs=33.5
Q ss_pred cCCCcchHHHHHHHHhcCCeEEEEcCCCHhh---HHHHHHHcCCC
Q psy6090 199 NRLKPQTEGVIKELKDARVKVVMITGDNIQT---AISVAKECGII 240 (674)
Q Consensus 199 n~lk~~t~~~I~~L~~agIrvvmiTGDn~~T---A~~vA~~~gi~ 240 (674)
-+.-|++.++++.|++.|++|+++|||.... +..-.++.|+.
T Consensus 119 apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~ 163 (229)
T TIGR01675 119 APALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFT 163 (229)
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCC
Confidence 3678999999999999999999999999755 33334556763
No 144
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=91.46 E-value=0.32 Score=48.21 Aligned_cols=30 Identities=27% Similarity=0.376 Sum_probs=26.3
Q ss_pred cCCCcchHHHHHHHHhcCCeEEEEcCCCHh
Q psy6090 199 NRLKPQTEGVIKELKDARVKVVMITGDNIQ 228 (674)
Q Consensus 199 n~lk~~t~~~I~~L~~agIrvvmiTGDn~~ 228 (674)
-++.|++.++++.|++.|+++.++|.....
T Consensus 93 ~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~ 122 (211)
T TIGR02247 93 TKLRPSMMAAIKTLRAKGFKTACITNNFPT 122 (211)
T ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCCc
Confidence 357899999999999999999999986543
No 145
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=91.28 E-value=0.94 Score=43.44 Aligned_cols=38 Identities=18% Similarity=0.273 Sum_probs=30.5
Q ss_pred CcchHHHHHHHHhcCCeEEEEcCCCHh------------hHHHHHHHcCC
Q psy6090 202 KPQTEGVIKELKDARVKVVMITGDNIQ------------TAISVAKECGI 239 (674)
Q Consensus 202 k~~t~~~I~~L~~agIrvvmiTGDn~~------------TA~~vA~~~gi 239 (674)
-|++.++|+.|+++|+++.++|.-+.. .+..+.+.+|+
T Consensus 44 ~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl 93 (166)
T TIGR01664 44 YPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKV 93 (166)
T ss_pred cCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCC
Confidence 499999999999999999999964432 34556777887
No 146
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=91.14 E-value=0.73 Score=42.08 Aligned_cols=39 Identities=10% Similarity=0.073 Sum_probs=33.4
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCC-CHhhHHHHHHHcC
Q psy6090 200 RLKPQTEGVIKELKDARVKVVMITGD-NIQTAISVAKECG 238 (674)
Q Consensus 200 ~lk~~t~~~I~~L~~agIrvvmiTGD-n~~TA~~vA~~~g 238 (674)
++.|++.++|+.|+++|+++.++|+. ....+..+.+..|
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 78999999999999999999999999 6766666666555
No 147
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=90.77 E-value=0.7 Score=49.89 Aligned_cols=26 Identities=27% Similarity=0.372 Sum_probs=24.6
Q ss_pred cCCCcchHHHHHHHHhcCCeEEEEcC
Q psy6090 199 NRLKPQTEGVIKELKDARVKVVMITG 224 (674)
Q Consensus 199 n~lk~~t~~~I~~L~~agIrvvmiTG 224 (674)
-++.|++.++|++|+++|++++++|+
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTN 54 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTN 54 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEEC
Confidence 56899999999999999999999998
No 148
>PLN02645 phosphoglycolate phosphatase
Probab=90.76 E-value=0.75 Score=48.89 Aligned_cols=47 Identities=17% Similarity=0.326 Sum_probs=41.5
Q ss_pred eeehhccCCCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHH---HHcCC
Q psy6090 193 GLIILENRLKPQTEGVIKELKDARVKVVMITGDNIQTAISVA---KECGI 239 (674)
Q Consensus 193 Gli~~en~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA---~~~gi 239 (674)
|.+.-.+.+-|++.++|+.|++.|++++++|++...+...++ +++|+
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi 86 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGL 86 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCC
Confidence 777777888899999999999999999999999988887777 55676
No 149
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=89.88 E-value=0.43 Score=41.77 Aligned_cols=56 Identities=20% Similarity=0.286 Sum_probs=40.7
Q ss_pred eeeehhccCCCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHH---HHcCCCCCCCeEE
Q psy6090 192 LGLIILENRLKPQTEGVIKELKDARVKVVMITGDNIQTAISVA---KECGIIDPGETVV 247 (674)
Q Consensus 192 lGli~~en~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA---~~~gi~~~~~~vi 247 (674)
=|.+...+++-|++.++|+.|+++|++++++|.....+...++ +.+|+.-..+.++
T Consensus 6 dGvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~~~~~i~ 64 (101)
T PF13344_consen 6 DGVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPVDEDEII 64 (101)
T ss_dssp TTTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT--GGGEE
T ss_pred ccEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCCCcCEEE
Confidence 3677778889999999999999999999999988877755555 6678764444444
No 150
>PHA02597 30.2 hypothetical protein; Provisional
Probab=89.24 E-value=0.9 Score=44.52 Aligned_cols=39 Identities=15% Similarity=0.160 Sum_probs=27.6
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCC
Q psy6090 200 RLKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKECGI 239 (674)
Q Consensus 200 ~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~gi 239 (674)
++.|++.+++++|++.+ +.+++|.-+..+....-+.+|+
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l 112 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNL 112 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCH
Confidence 57999999999999975 5667776554444444455555
No 151
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=88.13 E-value=1.6 Score=42.02 Aligned_cols=27 Identities=19% Similarity=0.316 Sum_probs=24.6
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCC
Q psy6090 200 RLKPQTEGVIKELKDARVKVVMITGDN 226 (674)
Q Consensus 200 ~lk~~t~~~I~~L~~agIrvvmiTGDn 226 (674)
++.|++.++|+.|+++|+++.++|.-+
T Consensus 26 ~~~pgv~e~L~~Lk~~G~~l~i~TN~~ 52 (176)
T TIGR00213 26 EFIDGVIDALRELKKMGYALVLVTNQS 52 (176)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCc
Confidence 368999999999999999999999765
No 152
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=88.13 E-value=1.2 Score=43.23 Aligned_cols=34 Identities=21% Similarity=0.155 Sum_probs=27.4
Q ss_pred HHHHHHHHHHcC---CEEEEeCCCccchhhhhhCCcc
Q psy6090 333 KQQLVLELQQLG---YYVAMCGDGANDCGALRAAHAG 366 (674)
Q Consensus 333 K~~iV~~lq~~g---~~V~m~GDG~ND~~aLk~AdvG 366 (674)
...+.+.+++.+ ....|+||-..|..+-..|+++
T Consensus 108 ~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~ 144 (181)
T COG0241 108 PGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIK 144 (181)
T ss_pred hHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCC
Confidence 456666777765 6789999999999998888887
No 153
>PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit
Probab=88.02 E-value=0.25 Score=42.31 Aligned_cols=50 Identities=16% Similarity=0.351 Sum_probs=32.1
Q ss_pred hhcccceecCC------cccCCHHHHHHHHHcCcE---EeC------CCCcccCCCCC---ccceEec
Q psy6090 81 ATCHSLTLING------ELSGDPLDLKMFESTGWT---LEE------PNLKEDCHYEL---PIPAIVR 130 (674)
Q Consensus 81 a~Chsl~~~~~------~l~Gdpld~~m~~~t~~~---l~~------~~~~~~~~~~~---~~~~v~~ 130 (674)
|+||++.+..+ ++.|||.|.|++++..+. ... .......+|++ +|++|++
T Consensus 1 ~LCn~a~~~~~~~~~~~~~~G~ptE~ALl~~~~~~g~~~~~~~~~~~~~~~~~~pF~S~rK~msvv~~ 68 (91)
T PF13246_consen 1 ALCNDAEIEYDDESKTEEIIGDPTEKALLRFAKKLGVGIDIKEIRSKYKIVAEIPFDSERKRMSVVVR 68 (91)
T ss_pred CCccccEeecCCCCccccccCCcCHHHHHHHHHHcCCCCcHHHHHhhcceeEEEccCcccceeEEEEe
Confidence 58999987421 299999999998877543 111 11223345663 6777776
No 154
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=88.00 E-value=0.73 Score=47.53 Aligned_cols=55 Identities=20% Similarity=0.358 Sum_probs=41.9
Q ss_pred eeehhccC----CCcchHHHHHHHHhcCCeEEEEcCCCHhh---HHHHHHHcCCCCCCCeEE
Q psy6090 193 GLIILENR----LKPQTEGVIKELKDARVKVVMITGDNIQT---AISVAKECGIIDPGETVV 247 (674)
Q Consensus 193 Gli~~en~----lk~~t~~~I~~L~~agIrvvmiTGDn~~T---A~~vA~~~gi~~~~~~vi 247 (674)
|.+.-.+. +-|++.++|++|+++|++++++||++..+ .....+++|+.-..+.++
T Consensus 10 Gtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~~~~~~i~ 71 (257)
T TIGR01458 10 GVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFDISEDEVF 71 (257)
T ss_pred CeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCCCCHHHeE
Confidence 66666666 88999999999999999999999988887 444556678754333333
No 155
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=87.95 E-value=1.6 Score=42.96 Aligned_cols=31 Identities=19% Similarity=0.460 Sum_probs=27.1
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHhhH
Q psy6090 200 RLKPQTEGVIKELKDARVKVVMITGDNIQTA 230 (674)
Q Consensus 200 ~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA 230 (674)
++.|++.++++.|+++|+++.++|.-+....
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~ 114 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHT 114 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhH
Confidence 4789999999999999999999998765543
No 156
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=87.45 E-value=1.1 Score=46.01 Aligned_cols=58 Identities=19% Similarity=0.262 Sum_probs=46.8
Q ss_pred eeehhccCCCcchHHHHHHHHhcCCeEEEEcC---CCHhhHHHHHHHcCCCCCCCeEEEEe
Q psy6090 193 GLIILENRLKPQTEGVIKELKDARVKVVMITG---DNIQTAISVAKECGIIDPGETVVDVS 250 (674)
Q Consensus 193 Gli~~en~lk~~t~~~I~~L~~agIrvvmiTG---Dn~~TA~~vA~~~gi~~~~~~vi~~~ 250 (674)
|.+.-.+.+-|++.++|++|++.|++++++|| +.........+++|+....+.++...
T Consensus 10 Gtl~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~~~~iit~~ 70 (249)
T TIGR01457 10 GTMYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPATLETVFTAS 70 (249)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEeeHH
Confidence 55666677778999999999999999999996 77888888888999865555565543
No 157
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=86.54 E-value=2.5 Score=52.47 Aligned_cols=41 Identities=15% Similarity=0.111 Sum_probs=37.6
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCCC
Q psy6090 200 RLKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKECGII 240 (674)
Q Consensus 200 ~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~gi~ 240 (674)
.+-|++.+.|++|+++|+++.++|+-....+..+.+..|+.
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~ 201 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLP 201 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCC
Confidence 46899999999999999999999999999988888889984
No 158
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=84.74 E-value=2.8 Score=40.51 Aligned_cols=39 Identities=18% Similarity=0.289 Sum_probs=33.5
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCCCC
Q psy6090 200 RLKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKECGIID 241 (674)
Q Consensus 200 ~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~gi~~ 241 (674)
++.+++.++|++|+ .+++++|+-+...+..+.+..|+..
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~ 122 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIED 122 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHh
Confidence 47789999999998 4799999998888888989999853
No 159
>PLN02151 trehalose-phosphatase
Probab=84.60 E-value=10 Score=40.89 Aligned_cols=62 Identities=18% Similarity=0.209 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHHc-C------CEEEEeCCCccchhhhhhC-----CcceeecCCccccccCccccccchhHHHHHH
Q psy6090 331 DQKQQLVLELQQL-G------YYVAMCGDGANDCGALRAA-----HAGISLSEAESSVASPFTSTVANISCVLRII 394 (674)
Q Consensus 331 ~qK~~iV~~lq~~-g------~~V~m~GDG~ND~~aLk~A-----dvGIams~aeasvAAdf~s~~~~i~~V~~~I 394 (674)
-+|...|+.+.+. + ..++++||-..|-.|++.. ++||-++.....-+|.|.+.+ .+.|...|
T Consensus 268 ~dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~Vg~~~k~T~A~y~L~d--p~eV~~~L 341 (354)
T PLN02151 268 WDKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGLGILVSKYAKETNASYSLQE--PDEVMEFL 341 (354)
T ss_pred CCHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCccEEeccCCCCCcceEeCCC--HHHHHHHH
Confidence 4899999988764 2 2489999999999999853 667777643333456666554 34455444
No 160
>PRK10444 UMP phosphatase; Provisional
Probab=84.59 E-value=1.4 Score=45.32 Aligned_cols=55 Identities=20% Similarity=0.340 Sum_probs=45.4
Q ss_pred eeehhccCCCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHc---CCCCCCCeEE
Q psy6090 193 GLIILENRLKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKEC---GIIDPGETVV 247 (674)
Q Consensus 193 Gli~~en~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~---gi~~~~~~vi 247 (674)
|.+.-.+.+-|++.++|+.|+++|++++++||+...+...+++++ |+.-+.+.++
T Consensus 10 GtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~~~~~~i~ 67 (248)
T PRK10444 10 GVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVDVPDSVFY 67 (248)
T ss_pred CceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCHhhEe
Confidence 777777889999999999999999999999999999988887774 6643334443
No 161
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=84.24 E-value=2.6 Score=44.98 Aligned_cols=37 Identities=19% Similarity=0.205 Sum_probs=33.7
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHH
Q psy6090 200 RLKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKE 236 (674)
Q Consensus 200 ~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~ 236 (674)
++.+++.++|++|++.|+...++|.-+...|..+.+.
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~ 67 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFER 67 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHh
Confidence 3578999999999999999999999999999888876
No 162
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=83.99 E-value=3.5 Score=39.17 Aligned_cols=39 Identities=26% Similarity=0.469 Sum_probs=36.0
Q ss_pred CCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCC
Q psy6090 201 LKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKECGI 239 (674)
Q Consensus 201 lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~gi 239 (674)
.-|+..+=+.+++++|++++++|.-+..-+..++..+|+
T Consensus 47 ~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v 85 (175)
T COG2179 47 ATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGV 85 (175)
T ss_pred CCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCC
Confidence 678888999999999999999999999999899999998
No 163
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=83.90 E-value=3.7 Score=41.60 Aligned_cols=42 Identities=21% Similarity=0.195 Sum_probs=32.4
Q ss_pred cCCCcchHHHHHHHHhcCCeEEEEcCCCHhh---HHHHHHHcCCC
Q psy6090 199 NRLKPQTEGVIKELKDARVKVVMITGDNIQT---AISVAKECGII 240 (674)
Q Consensus 199 n~lk~~t~~~I~~L~~agIrvvmiTGDn~~T---A~~vA~~~gi~ 240 (674)
.+.-|++.+.++.+++.|+.|+.+|||+..- ++.=.++.|+.
T Consensus 114 ~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~ 158 (229)
T PF03767_consen 114 APAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFP 158 (229)
T ss_dssp GEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTS
T ss_pred CcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCC
Confidence 3567889999999999999999999998662 22334566753
No 164
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=82.60 E-value=3.7 Score=42.93 Aligned_cols=41 Identities=12% Similarity=0.232 Sum_probs=38.0
Q ss_pred CC-cchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCCCC
Q psy6090 201 LK-PQTEGVIKELKDARVKVVMITGDNIQTAISVAKECGIID 241 (674)
Q Consensus 201 lk-~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~gi~~ 241 (674)
++ |++.+++++|+++|+++.++|+.....+....+++|+..
T Consensus 146 irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~ 187 (301)
T TIGR01684 146 IRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDR 187 (301)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCc
Confidence 45 999999999999999999999999999999999999964
No 165
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=81.82 E-value=7.6 Score=36.83 Aligned_cols=34 Identities=18% Similarity=0.304 Sum_probs=30.8
Q ss_pred cCCCcchHHHHHHHHhcCCeEEEEcCCCHhhHHH
Q psy6090 199 NRLKPQTEGVIKELKDARVKVVMITGDNIQTAIS 232 (674)
Q Consensus 199 n~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~ 232 (674)
|..++++.+..+.+++.|++++-+|+|+..-|..
T Consensus 26 d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~ 59 (157)
T PF08235_consen 26 DWTHPGAAELYRKIADNGYKILYLTARPIGQANR 59 (157)
T ss_pred hhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHH
Confidence 5899999999999999999999999999776643
No 166
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=81.34 E-value=4.3 Score=39.13 Aligned_cols=39 Identities=18% Similarity=0.158 Sum_probs=32.7
Q ss_pred CCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCCCC
Q psy6090 201 LKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKECGIID 241 (674)
Q Consensus 201 lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~gi~~ 241 (674)
+.| ..++++.|++. ++..++||.....+..+.+..|+..
T Consensus 89 ~~~-~~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~ 127 (188)
T PRK10725 89 PLP-LIEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRR 127 (188)
T ss_pred Ccc-HHHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHh
Confidence 445 46899999875 8999999999999999999999853
No 167
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=80.43 E-value=3.8 Score=40.80 Aligned_cols=39 Identities=5% Similarity=0.198 Sum_probs=32.9
Q ss_pred cCCCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCCC
Q psy6090 199 NRLKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKECGII 240 (674)
Q Consensus 199 n~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~gi~ 240 (674)
-++.|++.++|+.| ++++.++|+.....+...-+..|+.
T Consensus 87 ~~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~ 125 (221)
T PRK10563 87 LEPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGML 125 (221)
T ss_pred CCcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChH
Confidence 45779999999999 4999999999888777777778884
No 168
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=79.78 E-value=1.9 Score=39.41 Aligned_cols=33 Identities=12% Similarity=0.075 Sum_probs=28.8
Q ss_pred cCCCcchHHHHHHHHhcCCeEEEEcCCCHhhHH
Q psy6090 199 NRLKPQTEGVIKELKDARVKVVMITGDNIQTAI 231 (674)
Q Consensus 199 n~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~ 231 (674)
+++.+++.+++++++++|+.++++|||+.....
T Consensus 23 ~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~ 55 (126)
T TIGR01689 23 VAPILAVIEKLRHYKALGFEIVISSSRNMRTYE 55 (126)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEECCCCchhhh
Confidence 457789999999999999999999999987654
No 169
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=77.71 E-value=5.6 Score=41.66 Aligned_cols=41 Identities=20% Similarity=0.272 Sum_probs=36.8
Q ss_pred CC-cchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCCCC
Q psy6090 201 LK-PQTEGVIKELKDARVKVVMITGDNIQTAISVAKECGIID 241 (674)
Q Consensus 201 lk-~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~gi~~ 241 (674)
+| |++.++|++|+++|+++.++|+.+...+..+.+..|+..
T Consensus 148 irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~ 189 (303)
T PHA03398 148 IRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEG 189 (303)
T ss_pred cCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCc
Confidence 34 999999999999999999999888888889999999953
No 170
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=74.24 E-value=6.1 Score=41.19 Aligned_cols=56 Identities=16% Similarity=0.297 Sum_probs=42.2
Q ss_pred eeehhccCCCcchHHHHHHHHhcCCeEEEEcCCCHhhHHH---HHHHcCCCCCCCeEEE
Q psy6090 193 GLIILENRLKPQTEGVIKELKDARVKVVMITGDNIQTAIS---VAKECGIIDPGETVVD 248 (674)
Q Consensus 193 Gli~~en~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~---vA~~~gi~~~~~~vi~ 248 (674)
|.+.-.+++=|++.++|++|+++|++++++||+...+... -.+++|+....+.++.
T Consensus 11 Gtl~~~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~~~~~i~t 69 (279)
T TIGR01452 11 GVLWLGERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNGLAEQLFS 69 (279)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEec
Confidence 5666667778899999999999999999999977554444 3466787655555554
No 171
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=72.73 E-value=7 Score=38.94 Aligned_cols=69 Identities=16% Similarity=0.282 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHHc---CCEEEEeCCCccchhhhhhC----CcceeecCCcccc-ccCccccccchhHHHHHH----HHhh
Q psy6090 331 DQKQQLVLELQQL---GYYVAMCGDGANDCGALRAA----HAGISLSEAESSV-ASPFTSTVANISCVLRII----REGR 398 (674)
Q Consensus 331 ~qK~~iV~~lq~~---g~~V~m~GDG~ND~~aLk~A----dvGIams~aeasv-AAdf~s~~~~i~~V~~~I----~eGR 398 (674)
..|+.+++.+.++ ....+++||+..|+.||+.+ ++.||..+.+-.+ -||...-+++...+..+| ++||
T Consensus 190 g~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaFNGNeYal~eAdVAvisp~~~a~~pvielf~e~Gk 269 (315)
T COG4030 190 GEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAFNGNEYALKEADVAVISPTAMAEAPVIELFMERGK 269 (315)
T ss_pred cchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEecCCcccccccceEEeccchhhhhHHHHHHHHHhH
Confidence 4577788777765 34567889999999999987 3556666554322 233333333444444433 4566
Q ss_pred H
Q psy6090 399 A 399 (674)
Q Consensus 399 ~ 399 (674)
-
T Consensus 270 d 270 (315)
T COG4030 270 D 270 (315)
T ss_pred H
Confidence 4
No 172
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=71.25 E-value=13 Score=35.83 Aligned_cols=42 Identities=24% Similarity=0.403 Sum_probs=34.5
Q ss_pred ccCCCcchHHHHHHHHhcCC--eEEEEcCC-------CHhhHHHHHHHcCC
Q psy6090 198 ENRLKPQTEGVIKELKDARV--KVVMITGD-------NIQTAISVAKECGI 239 (674)
Q Consensus 198 en~lk~~t~~~I~~L~~agI--rvvmiTGD-------n~~TA~~vA~~~gi 239 (674)
++.+.|+..+.+++|++.+. +++++|-- +...|..+++.+|+
T Consensus 57 ~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgI 107 (168)
T PF09419_consen 57 EDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGI 107 (168)
T ss_pred cCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCC
Confidence 34578999999999999987 59999975 36778888888886
No 173
>KOG0208|consensus
Probab=69.73 E-value=3.2 Score=49.43 Aligned_cols=49 Identities=35% Similarity=0.676 Sum_probs=37.1
Q ss_pred CCccccccccCCC--CCCCcccccccccccCCCCCCccccCCCCCcCCceEEEEE
Q psy6090 1 MFESTGWTLEEPN--LKEDCHYELPIPAIVRPPSDSQAYENHEDSRKTRHYASVV 53 (674)
Q Consensus 1 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~te~gld~~g~~ 53 (674)
|||+|||++||.+ -.+|+.+.+.+|.+.|+..|+ +.+ .||.|....|++
T Consensus 554 mfe~t~w~~ee~~~~~~~~~~~~~~~p~v~~p~~~~--~~~--~t~~~~~~~si~ 604 (1140)
T KOG0208|consen 554 MFESTGWVYEEADIEDEATREFNTLIPTVVRPPENA--FNQ--STECGEGEISIV 604 (1140)
T ss_pred eeeccceEEEeccccchhhhhhCCccCCEeCCCccc--ccC--CCcCCCcceEEE
Confidence 8999999998864 345788899999999999987 332 456565555653
No 174
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=68.50 E-value=30 Score=39.24 Aligned_cols=43 Identities=19% Similarity=0.156 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHHcCCEEEEeCCCccchhhhhhCCcceeecCC
Q psy6090 330 SDQKQQLVLELQQLGYYVAMCGDGANDCGALRAAHAGISLSEA 372 (674)
Q Consensus 330 P~qK~~iV~~lq~~g~~V~m~GDG~ND~~aLk~AdvGIams~a 372 (674)
-++|..-++..........+.||+.||.+||+.|+-+..+...
T Consensus 174 Ge~Kv~rl~~~~g~~~~~~aYgDS~sD~plL~~a~e~y~V~~~ 216 (497)
T PLN02177 174 GDHKRDAVLKEFGDALPDLGLGDRETDHDFMSICKEGYMVPRT 216 (497)
T ss_pred cHHHHHHHHHHhCCCCceEEEECCccHHHHHHhCCccEEeCCC
Confidence 3566666653221122237899999999999999999999873
No 175
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=68.01 E-value=13 Score=37.67 Aligned_cols=29 Identities=28% Similarity=0.302 Sum_probs=23.8
Q ss_pred cCCCcchHHHHHHHHhcCCeEEEEcCCCHh
Q psy6090 199 NRLKPQTEGVIKELKDARVKVVMITGDNIQ 228 (674)
Q Consensus 199 n~lk~~t~~~I~~L~~agIrvvmiTGDn~~ 228 (674)
-++-|++.++++.|++. +++.++|.-+..
T Consensus 112 ~~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~ 140 (238)
T PRK10748 112 IDVPQATHDTLKQLAKK-WPLVAITNGNAQ 140 (238)
T ss_pred CCCCccHHHHHHHHHcC-CCEEEEECCCch
Confidence 35779999999999975 899999986543
No 176
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=67.15 E-value=8.4 Score=34.51 Aligned_cols=86 Identities=22% Similarity=0.250 Sum_probs=49.8
Q ss_pred HHHHHHHhhcCcEEEEEeeecccccchHHHhhhchhhhcccceeeeeehhccCCCcchHHHHHHHHhcCCe-EEEEcCCC
Q psy6090 148 VSVLSEYTEQGYRVIALASRTLSIDDYKHLNYMKREDIEKDLEFLGLIILENRLKPQTEGVIKELKDARVK-VVMITGDN 226 (674)
Q Consensus 148 ~~~l~~~~~~G~Rvla~A~k~l~~~~~~~~~~~~r~~iE~dL~flGli~~en~lk~~t~~~I~~L~~agIr-vvmiTGDn 226 (674)
...++.+.++|++|.++.-|.-+-....-+.++...--.-|+..+. -..+.+.++++++.+.|++ +|+.+|..
T Consensus 17 ~~v~~~l~~~G~~v~~Vnp~~~~i~G~~~y~sl~e~p~~iDlavv~------~~~~~~~~~v~~~~~~g~~~v~~~~g~~ 90 (116)
T PF13380_consen 17 YRVLRNLKAAGYEVYPVNPKGGEILGIKCYPSLAEIPEPIDLAVVC------VPPDKVPEIVDEAAALGVKAVWLQPGAE 90 (116)
T ss_dssp HHHHHHHHHTT-EEEEESTTCSEETTEE-BSSGGGCSST-SEEEE-------S-HHHHHHHHHHHHHHT-SEEEE-TTS-
T ss_pred HHHHHHHHhCCCEEEEECCCceEECcEEeeccccCCCCCCCEEEEE------cCHHHHHHHHHHHHHcCCCEEEEEcchH
Confidence 3567788889999999976653211101111111100122333332 2567789999999999986 68888988
Q ss_pred HhhHHHHHHHcCC
Q psy6090 227 IQTAISVAKECGI 239 (674)
Q Consensus 227 ~~TA~~vA~~~gi 239 (674)
...+...|++.||
T Consensus 91 ~~~~~~~a~~~gi 103 (116)
T PF13380_consen 91 SEELIEAAREAGI 103 (116)
T ss_dssp -HHHHHHHHHTT-
T ss_pred HHHHHHHHHHcCC
Confidence 8999999999887
No 177
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=64.43 E-value=47 Score=34.49 Aligned_cols=30 Identities=17% Similarity=0.231 Sum_probs=26.7
Q ss_pred cCCCcchHHHHHHHHhcCCeEEEEcCCCHh
Q psy6090 199 NRLKPQTEGVIKELKDARVKVVMITGDNIQ 228 (674)
Q Consensus 199 n~lk~~t~~~I~~L~~agIrvvmiTGDn~~ 228 (674)
.|.-|++.+..+.+++.|++++.+|||...
T Consensus 144 ApAlp~al~ly~~l~~~G~kIf~VSgR~e~ 173 (275)
T TIGR01680 144 APALPETLKNYNKLVSLGFKIIFLSGRLKD 173 (275)
T ss_pred CCCChHHHHHHHHHHHCCCEEEEEeCCchh
Confidence 456789999999999999999999999854
No 178
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=62.10 E-value=15 Score=36.86 Aligned_cols=43 Identities=16% Similarity=0.277 Sum_probs=39.9
Q ss_pred cCCCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCCCC
Q psy6090 199 NRLKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKECGIID 241 (674)
Q Consensus 199 n~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~gi~~ 241 (674)
.++.|++.+.+++|++.|+...++|+-....+..+.+..|+..
T Consensus 85 ~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~ 127 (221)
T COG0637 85 LKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLD 127 (221)
T ss_pred CCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChh
Confidence 4789999999999999999999999999999999999999964
No 179
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=61.49 E-value=23 Score=31.91 Aligned_cols=83 Identities=20% Similarity=0.288 Sum_probs=60.4
Q ss_pred HHHHHhhcCcEEEEEeeecccccchHHHhhhchhhhcccceeeeeehhccCCCcchHHHHHHHHhcCC-eE-EEEcCCCH
Q psy6090 150 VLSEYTEQGYRVIALASRTLSIDDYKHLNYMKREDIEKDLEFLGLIILENRLKPQTEGVIKELKDARV-KV-VMITGDNI 227 (674)
Q Consensus 150 ~l~~~~~~G~Rvla~A~k~l~~~~~~~~~~~~r~~iE~dL~flGli~~en~lk~~t~~~I~~L~~agI-rv-vmiTGDn~ 227 (674)
....+...|++|+-++-. .+.+ ++-+.-.+.+-.++++-.......+..++.+++|+++|. ++ +++-|..+
T Consensus 19 ~~~~l~~~G~~vi~lG~~-vp~e------~~~~~a~~~~~d~V~iS~~~~~~~~~~~~~~~~L~~~~~~~i~i~~GG~~~ 91 (122)
T cd02071 19 IARALRDAGFEVIYTGLR-QTPE------EIVEAAIQEDVDVIGLSSLSGGHMTLFPEVIELLRELGAGDILVVGGGIIP 91 (122)
T ss_pred HHHHHHHCCCEEEECCCC-CCHH------HHHHHHHHcCCCEEEEcccchhhHHHHHHHHHHHHhcCCCCCEEEEECCCC
Confidence 334678999999999876 3311 222334567888889888889999999999999999977 43 56666655
Q ss_pred hhHHHHHHHcCC
Q psy6090 228 QTAISVAKECGI 239 (674)
Q Consensus 228 ~TA~~vA~~~gi 239 (674)
.--..-.++.|+
T Consensus 92 ~~~~~~~~~~G~ 103 (122)
T cd02071 92 PEDYELLKEMGV 103 (122)
T ss_pred HHHHHHHHHCCC
Confidence 444566778997
No 180
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=59.31 E-value=12 Score=38.89 Aligned_cols=46 Identities=24% Similarity=0.335 Sum_probs=40.6
Q ss_pred eeeeehhccCCCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHH
Q psy6090 191 FLGLIILENRLKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKE 236 (674)
Q Consensus 191 flGli~~en~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~ 236 (674)
+=|.+.--+++=|++.++|+.|+++|++++.+|--...+...++++
T Consensus 15 lDGvl~~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~ 60 (269)
T COG0647 15 LDGVLYRGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAAR 60 (269)
T ss_pred CcCceEeCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHH
Confidence 3488888999999999999999999999999999998888855544
No 181
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=58.24 E-value=29 Score=32.11 Aligned_cols=82 Identities=21% Similarity=0.237 Sum_probs=60.3
Q ss_pred HHHHhhcCcEEEEEeeecccccchHHHhhhchhhhcccceeeeeehhccCCCcchHHHHHHHHhcCC-e-EEEEcCCC--
Q psy6090 151 LSEYTEQGYRVIALASRTLSIDDYKHLNYMKREDIEKDLEFLGLIILENRLKPQTEGVIKELKDARV-K-VVMITGDN-- 226 (674)
Q Consensus 151 l~~~~~~G~Rvla~A~k~l~~~~~~~~~~~~r~~iE~dL~flGli~~en~lk~~t~~~I~~L~~agI-r-vvmiTGDn-- 226 (674)
...+..+|++|+-++...-. .++-+.-.|.+-.++|+-.+.....+..++.+++|++.|. . .+++-|--
T Consensus 24 ~~~lr~~G~eVi~LG~~vp~-------e~i~~~a~~~~~d~V~lS~~~~~~~~~~~~~~~~L~~~~~~~~~i~vGG~~~~ 96 (137)
T PRK02261 24 DRALTEAGFEVINLGVMTSQ-------EEFIDAAIETDADAILVSSLYGHGEIDCRGLREKCIEAGLGDILLYVGGNLVV 96 (137)
T ss_pred HHHHHHCCCEEEECCCCCCH-------HHHHHHHHHcCCCEEEEcCccccCHHHHHHHHHHHHhcCCCCCeEEEECCCCC
Confidence 34667899999999976433 1233445678889999999999999999999999999955 2 35555543
Q ss_pred ----HhhHHHHHHHcCC
Q psy6090 227 ----IQTAISVAKECGI 239 (674)
Q Consensus 227 ----~~TA~~vA~~~gi 239 (674)
..-....++++|.
T Consensus 97 ~~~~~~~~~~~l~~~G~ 113 (137)
T PRK02261 97 GKHDFEEVEKKFKEMGF 113 (137)
T ss_pred CccChHHHHHHHHHcCC
Confidence 2334467889995
No 182
>PF14163 SieB: Superinfection exclusion protein B
Probab=56.96 E-value=23 Score=33.27 Aligned_cols=46 Identities=13% Similarity=0.272 Sum_probs=22.3
Q ss_pred HHHhhcccchhhhhcceecCCC-CCcHHHHHHHHHHHHHHHHHHHHHH
Q psy6090 565 CIYITLIPSEFIIQFLQLRFPP-NMQFPLIVIYLAICNFVLSLFIENF 611 (674)
Q Consensus 565 ~~~~~~~~~~~l~~~~~l~~~p-~~~~~~~l~~~~~~~~~~~~~~e~~ 611 (674)
+..+++.|...+ ..+++..+. .+.+++.++++..+.++++.++..+
T Consensus 9 ~~~llf~P~~~~-~~l~l~~~~~~y~~~i~~~fl~s~s~li~~~~~~~ 55 (151)
T PF14163_consen 9 SGLLLFLPESLL-EWLNLDKFEIKYQPWIGLIFLFSVSYLIAQLLSFI 55 (151)
T ss_pred HHHHHHCCHHHH-HHhCcchHHHhcchHHHHHHHHHHHHHHHHHHHHH
Confidence 334556665443 444543321 2344555555555555565555544
No 183
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=55.38 E-value=41 Score=31.06 Aligned_cols=82 Identities=16% Similarity=0.259 Sum_probs=58.4
Q ss_pred HHHHhhcCcEEEEEeeecccccchHHHhhhchhhhcccceeeeeehhccCCCcchHHHHHHHHhcCC--eEEEEcCCCHh
Q psy6090 151 LSEYTEQGYRVIALASRTLSIDDYKHLNYMKREDIEKDLEFLGLIILENRLKPQTEGVIKELKDARV--KVVMITGDNIQ 228 (674)
Q Consensus 151 l~~~~~~G~Rvla~A~k~l~~~~~~~~~~~~r~~iE~dL~flGli~~en~lk~~t~~~I~~L~~agI--rvvmiTGDn~~ 228 (674)
...+...||+|+-++...-+ ++ +-+.-.|.+-.++|+-.+--.--+..+++++.|+++|+ ..+|+-|-...
T Consensus 22 ~~~l~~~GfeVi~LG~~v~~-e~------~v~aa~~~~adiVglS~l~~~~~~~~~~~~~~l~~~gl~~~~vivGG~~vi 94 (134)
T TIGR01501 22 DHAFTNAGFNVVNLGVLSPQ-EE------FIKAAIETKADAILVSSLYGHGEIDCKGLRQKCDEAGLEGILLYVGGNLVV 94 (134)
T ss_pred HHHHHHCCCEEEECCCCCCH-HH------HHHHHHHcCCCEEEEecccccCHHHHHHHHHHHHHCCCCCCEEEecCCcCc
Confidence 34667899999999987554 22 22334567888999988888877889999999999987 34566664211
Q ss_pred ------hHHHHHHHcCC
Q psy6090 229 ------TAISVAKECGI 239 (674)
Q Consensus 229 ------TA~~vA~~~gi 239 (674)
.-..-++++|+
T Consensus 95 ~~~d~~~~~~~l~~~Gv 111 (134)
T TIGR01501 95 GKQDFPDVEKRFKEMGF 111 (134)
T ss_pred ChhhhHHHHHHHHHcCC
Confidence 11345789996
No 184
>cd02072 Glm_B12_BD B12 binding domain of glutamate mutase (Glm). Glutamate mutase catalysis the conversion of (S)-glutamate with (2S,3S)-3-methylaspartate. The rearrangement reaction is initiated by the extraction of a hydrogen from the protein-bound substrate by a 5'-desoxyadenosyl radical, which is generated by the homolytic cleavage of the organometallic bond of the cofactor B12. Glm is a heterotetrameric molecule consisting of two alpha and two epsilon polypeptide chains.
Probab=55.02 E-value=28 Score=31.89 Aligned_cols=80 Identities=20% Similarity=0.325 Sum_probs=59.5
Q ss_pred HHhhcCcEEEEEeeecccccchHHHhhhchhhhcccceeeeeehhccCCCcchHHHHHHHHhcCC-eEEEEcCCCH----
Q psy6090 153 EYTEQGYRVIALASRTLSIDDYKHLNYMKREDIEKDLEFLGLIILENRLKPQTEGVIKELKDARV-KVVMITGDNI---- 227 (674)
Q Consensus 153 ~~~~~G~Rvla~A~k~l~~~~~~~~~~~~r~~iE~dL~flGli~~en~lk~~t~~~I~~L~~agI-rvvmiTGDn~---- 227 (674)
.+...||.|+-++...-+ + .+-+.-.|.+-.++|+-.+--.--+..+++++.|+++|+ .+.++=|-++
T Consensus 22 ~L~~~GfeVidLG~~v~~-e------~~v~aa~~~~adiVglS~L~t~~~~~~~~~~~~l~~~gl~~v~vivGG~~~i~~ 94 (128)
T cd02072 22 AFTEAGFNVVNLGVLSPQ-E------EFIDAAIETDADAILVSSLYGHGEIDCKGLREKCDEAGLKDILLYVGGNLVVGK 94 (128)
T ss_pred HHHHCCCEEEECCCCCCH-H------HHHHHHHHcCCCEEEEeccccCCHHHHHHHHHHHHHCCCCCCeEEEECCCCCCh
Confidence 566899999999986544 1 223345678899999999999988999999999999998 5644444443
Q ss_pred ---hhHHHHHHHcCC
Q psy6090 228 ---QTAISVAKECGI 239 (674)
Q Consensus 228 ---~TA~~vA~~~gi 239 (674)
.....-.+++|.
T Consensus 95 ~d~~~~~~~L~~~Gv 109 (128)
T cd02072 95 QDFEDVEKRFKEMGF 109 (128)
T ss_pred hhhHHHHHHHHHcCC
Confidence 223355788887
No 185
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=54.65 E-value=25 Score=35.66 Aligned_cols=48 Identities=17% Similarity=0.266 Sum_probs=37.8
Q ss_pred eeehhccCCCcchHHHHHHHHhcCCeEEEEc---CCCHhhHHHHHHH-cCCC
Q psy6090 193 GLIILENRLKPQTEGVIKELKDARVKVVMIT---GDNIQTAISVAKE-CGII 240 (674)
Q Consensus 193 Gli~~en~lk~~t~~~I~~L~~agIrvvmiT---GDn~~TA~~vA~~-~gi~ 240 (674)
|++.-.+.+=|++.++|+.++++|++++++| |+.........++ .|+.
T Consensus 7 GvL~~~~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~ 58 (236)
T TIGR01460 7 GVLWLGHKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVD 58 (236)
T ss_pred CccCcCCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCC
Confidence 6666667778899999999999999999999 6666666555555 6764
No 186
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=54.63 E-value=37 Score=30.11 Aligned_cols=83 Identities=25% Similarity=0.408 Sum_probs=59.5
Q ss_pred HHHHHhhcCcEEEEEeeecccccchHHHhhhchhhhcccceeeeeehhccCCCcchHHHHHHHHhcCC-eE-EEEcCCCH
Q psy6090 150 VLSEYTEQGYRVIALASRTLSIDDYKHLNYMKREDIEKDLEFLGLIILENRLKPQTEGVIKELKDARV-KV-VMITGDNI 227 (674)
Q Consensus 150 ~l~~~~~~G~Rvla~A~k~l~~~~~~~~~~~~r~~iE~dL~flGli~~en~lk~~t~~~I~~L~~agI-rv-vmiTGDn~ 227 (674)
....+...|++|+-++.. ++.++ +-+.-.+.+-.++|+-....+-.+.+++.++.+|+.+- ++ +++-|-..
T Consensus 19 ~~~~l~~~G~~V~~lg~~-~~~~~------l~~~~~~~~pdvV~iS~~~~~~~~~~~~~i~~l~~~~~~~~~i~vGG~~~ 91 (119)
T cd02067 19 VARALRDAGFEVIDLGVD-VPPEE------IVEAAKEEDADAIGLSGLLTTHMTLMKEVIEELKEAGLDDIPVLVGGAIV 91 (119)
T ss_pred HHHHHHHCCCEEEECCCC-CCHHH------HHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHHcCCCCCeEEEECCCC
Confidence 334667899999888743 44222 22334567888999999888888999999999999976 44 66777554
Q ss_pred hhHHHHHHHcCC
Q psy6090 228 QTAISVAKECGI 239 (674)
Q Consensus 228 ~TA~~vA~~~gi 239 (674)
......+++.|.
T Consensus 92 ~~~~~~~~~~G~ 103 (119)
T cd02067 92 TRDFKFLKEIGV 103 (119)
T ss_pred ChhHHHHHHcCC
Confidence 443567888887
No 187
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=52.10 E-value=47 Score=38.01 Aligned_cols=39 Identities=18% Similarity=0.324 Sum_probs=30.3
Q ss_pred CCcchHHHHHHHHhcCCeEEEEcCCCH------------hhHHHHHHHcCC
Q psy6090 201 LKPQTEGVIKELKDARVKVVMITGDNI------------QTAISVAKECGI 239 (674)
Q Consensus 201 lk~~t~~~I~~L~~agIrvvmiTGDn~------------~TA~~vA~~~gi 239 (674)
+-|++.++|++|+++|++++++|.=.. ..+..+.+++|+
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgi 248 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGV 248 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCC
Confidence 469999999999999999999997443 234556666665
No 188
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=51.48 E-value=1.3e+02 Score=32.41 Aligned_cols=38 Identities=18% Similarity=0.220 Sum_probs=35.1
Q ss_pred CCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHc-C
Q psy6090 201 LKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKEC-G 238 (674)
Q Consensus 201 lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~-g 238 (674)
.-|++.++++.|+++|+++.++|+-....+..+.+.+ |
T Consensus 185 ~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g 223 (343)
T TIGR02244 185 RDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLG 223 (343)
T ss_pred cchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhC
Confidence 4689999999999999999999999999999999885 6
No 189
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain. Methylmalonyl-CoA mutase (EC 5.4.99.2) catalyzes a reversible isomerization between L-methylmalonyl-CoA and succinyl-CoA. The enzyme uses an adenosylcobalamin cofactor. It may be a homodimer, as in mitochondrion, or a heterodimer with partially homologous beta chain that does not bind the adenosylcobalamin cofactor, as in Propionibacterium freudenreichii. The most similar archaeal sequences are separate chains, such as AF2215 and AF2219 of Archaeoglobus fulgidus, that correspond roughly to the first 500 and last 130 residues, respectively of known methylmalonyl-CoA mutases. This model describes the C-terminal domain subfamily. In a neighbor-joining tree (methylaspartate mutase S chain as the outgroup), AF2219 branches with a coenzyme B12-dependent enzyme known not to be 5.4.99.2.
Probab=49.06 E-value=45 Score=30.61 Aligned_cols=83 Identities=19% Similarity=0.285 Sum_probs=61.1
Q ss_pred HHHHhhcCcEEEEEeeecccccchHHHhhhchhhhcccceeeeeehhccCCCcchHHHHHHHHhcCC-eE-EEEcCCCHh
Q psy6090 151 LSEYTEQGYRVIALASRTLSIDDYKHLNYMKREDIEKDLEFLGLIILENRLKPQTEGVIKELKDARV-KV-VMITGDNIQ 228 (674)
Q Consensus 151 l~~~~~~G~Rvla~A~k~l~~~~~~~~~~~~r~~iE~dL~flGli~~en~lk~~t~~~I~~L~~agI-rv-vmiTGDn~~ 228 (674)
-..+...||+|+-++...-+ ++ .-+...|.+-..+|+-.+...-.+..+++++.|+++|. ++ +|+-|-.+.
T Consensus 23 ~~~l~~~GfeVi~lg~~~s~-e~------~v~aa~e~~adii~iSsl~~~~~~~~~~~~~~L~~~g~~~i~vivGG~~~~ 95 (132)
T TIGR00640 23 ATAYADLGFDVDVGPLFQTP-EE------IARQAVEADVHVVGVSSLAGGHLTLVPALRKELDKLGRPDILVVVGGVIPP 95 (132)
T ss_pred HHHHHhCCcEEEECCCCCCH-HH------HHHHHHHcCCCEEEEcCchhhhHHHHHHHHHHHHhcCCCCCEEEEeCCCCh
Confidence 34678899999999876433 12 22334578999999999999999999999999999986 44 555444444
Q ss_pred hHHHHHHHcCCC
Q psy6090 229 TAISVAKECGII 240 (674)
Q Consensus 229 TA~~vA~~~gi~ 240 (674)
.-..-.+++|+.
T Consensus 96 ~~~~~l~~~Gvd 107 (132)
T TIGR00640 96 QDFDELKEMGVA 107 (132)
T ss_pred HhHHHHHHCCCC
Confidence 445667889983
No 190
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=48.81 E-value=62 Score=31.92 Aligned_cols=49 Identities=18% Similarity=0.167 Sum_probs=39.3
Q ss_pred ccCCCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCCCCCCCeEE
Q psy6090 198 ENRLKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKECGIIDPGETVV 247 (674)
Q Consensus 198 en~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~gi~~~~~~vi 247 (674)
.-++-+++.+++++|+.. +++.++|--....+....+++|+.+.=+.++
T Consensus 97 ~~~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~~~Fd~v~ 145 (229)
T COG1011 97 LLPDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLLDYFDAVF 145 (229)
T ss_pred hCccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCChhhhheEE
Confidence 446788999999999998 9999999878888889999999754433333
No 191
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=48.38 E-value=32 Score=33.88 Aligned_cols=82 Identities=20% Similarity=0.212 Sum_probs=59.7
Q ss_pred HHHHHhhcCcEEEEEeeecccccchHHHhhhchhhhcccceeeeeehhccCCCcchHHHHHHHHhcCCe---EEEEcCCC
Q psy6090 150 VLSEYTEQGYRVIALASRTLSIDDYKHLNYMKREDIEKDLEFLGLIILENRLKPQTEGVIKELKDARVK---VVMITGDN 226 (674)
Q Consensus 150 ~l~~~~~~G~Rvla~A~k~l~~~~~~~~~~~~r~~iE~dL~flGli~~en~lk~~t~~~I~~L~~agIr---vvmiTGDn 226 (674)
....+..+|++|+-++... +.++ +-+.-.+.+-.++|+-+.-..--+..++.|+.|+++|.+ .+++-|..
T Consensus 104 v~~~l~~~G~~vi~LG~~v-p~e~------~v~~~~~~~pd~v~lS~~~~~~~~~~~~~i~~l~~~~~~~~v~i~vGG~~ 176 (197)
T TIGR02370 104 VVTMLRANGFDVIDLGRDV-PIDT------VVEKVKKEKPLMLTGSALMTTTMYGQKDINDKLKEEGYRDSVKFMVGGAP 176 (197)
T ss_pred HHHHHHhCCcEEEECCCCC-CHHH------HHHHHHHcCCCEEEEccccccCHHHHHHHHHHHHHcCCCCCCEEEEEChh
Confidence 3456778999999998542 2122 222334678899999999999999999999999999886 45666644
Q ss_pred HhhHHHHHHHcCCC
Q psy6090 227 IQTAISVAKECGII 240 (674)
Q Consensus 227 ~~TA~~vA~~~gi~ 240 (674)
.+. ..|++.|-.
T Consensus 177 -~~~-~~~~~~gad 188 (197)
T TIGR02370 177 -VTQ-DWADKIGAD 188 (197)
T ss_pred -cCH-HHHHHhCCc
Confidence 443 578888764
No 192
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=47.74 E-value=29 Score=33.37 Aligned_cols=42 Identities=26% Similarity=0.281 Sum_probs=32.3
Q ss_pred cCCCcchHHHHHHHHhcCCeEEEEc-CCCHhhHHHHHHHcCCC
Q psy6090 199 NRLKPQTEGVIKELKDARVKVVMIT-GDNIQTAISVAKECGII 240 (674)
Q Consensus 199 n~lk~~t~~~I~~L~~agIrvvmiT-GDn~~TA~~vA~~~gi~ 240 (674)
=.+-|+++++|++|++.|+++.++| -+.+..|..+-+.+++.
T Consensus 44 v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~ 86 (169)
T PF12689_consen 44 VSLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEID 86 (169)
T ss_dssp E---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C
T ss_pred EEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCC
Confidence 3478999999999999999999999 68899999999999997
No 193
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=47.54 E-value=38 Score=33.44 Aligned_cols=82 Identities=27% Similarity=0.370 Sum_probs=58.9
Q ss_pred HHHHHhhcCcEEEEEeeecccccchHHHhhhchhhhcccceeeeeehhccCCCcchHHHHHHHHhcCC--eEEEEcCCCH
Q psy6090 150 VLSEYTEQGYRVIALASRTLSIDDYKHLNYMKREDIEKDLEFLGLIILENRLKPQTEGVIKELKDARV--KVVMITGDNI 227 (674)
Q Consensus 150 ~l~~~~~~G~Rvla~A~k~l~~~~~~~~~~~~r~~iE~dL~flGli~~en~lk~~t~~~I~~L~~agI--rvvmiTGDn~ 227 (674)
....+...|++|+-++ ..++.++ +-+.-.+.+-.++|+-..-..-.+..++.|+.||+++. ++.++=|-..
T Consensus 102 v~~~l~~~G~~vi~lG-~~~p~~~------l~~~~~~~~~d~v~lS~~~~~~~~~~~~~i~~lr~~~~~~~~~i~vGG~~ 174 (201)
T cd02070 102 VATMLEANGFEVIDLG-RDVPPEE------FVEAVKEHKPDILGLSALMTTTMGGMKEVIEALKEAGLRDKVKVMVGGAP 174 (201)
T ss_pred HHHHHHHCCCEEEECC-CCCCHHH------HHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHHCCCCcCCeEEEECCc
Confidence 3456779999998888 3333222 22334467888999999888888999999999999987 6644444455
Q ss_pred hhHHHHHHHcCC
Q psy6090 228 QTAISVAKECGI 239 (674)
Q Consensus 228 ~TA~~vA~~~gi 239 (674)
.+. ..+++.|-
T Consensus 175 ~~~-~~~~~~Ga 185 (201)
T cd02070 175 VNQ-EFADEIGA 185 (201)
T ss_pred CCH-HHHHHcCC
Confidence 554 57888876
No 194
>COG5012 Predicted cobalamin binding protein [General function prediction only]
Probab=45.81 E-value=26 Score=35.03 Aligned_cols=84 Identities=17% Similarity=0.208 Sum_probs=60.5
Q ss_pred HHHHHhhcCcEEEEEeeecccccchHHHhhhchhhhcccceeeeeehhccCCCcchHHHHHHHHhcCCeEEEEcC-CCHh
Q psy6090 150 VLSEYTEQGYRVIALASRTLSIDDYKHLNYMKREDIEKDLEFLGLIILENRLKPQTEGVIKELKDARVKVVMITG-DNIQ 228 (674)
Q Consensus 150 ~l~~~~~~G~Rvla~A~k~l~~~~~~~~~~~~r~~iE~dL~flGli~~en~lk~~t~~~I~~L~~agIrvvmiTG-Dn~~ 228 (674)
+..-+...||+|+=++.-.-. ++|-+ .-.|.+-.++|.-++...--++-+++|++|+++|||--+++| --..
T Consensus 124 V~~ml~~aGfevidLG~dvP~-e~fve------~a~e~k~d~v~~SalMTttm~~~~~viE~L~eeGiRd~v~v~vGGAp 196 (227)
T COG5012 124 VATMLEAAGFEVIDLGRDVPV-EEFVE------KAKELKPDLVSMSALMTTTMIGMKDVIELLKEEGIRDKVIVMVGGAP 196 (227)
T ss_pred HHHHHHhCCcEEEecCCCCCH-HHHHH------HHHHcCCcEEechHHHHHHHHHHHHHHHHHHHcCCccCeEEeecCcc
Confidence 334567779999999864333 33222 223566788999998888888999999999999999877666 3343
Q ss_pred hHHHHHHHcCCC
Q psy6090 229 TAISVAKECGII 240 (674)
Q Consensus 229 TA~~vA~~~gi~ 240 (674)
.....|++.|-.
T Consensus 197 vtq~~a~~iGAD 208 (227)
T COG5012 197 VTQDWADKIGAD 208 (227)
T ss_pred ccHHHHHHhCCC
Confidence 555677777764
No 195
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=42.44 E-value=34 Score=32.38 Aligned_cols=34 Identities=12% Similarity=0.228 Sum_probs=25.6
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCCC
Q psy6090 200 RLKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKECGII 240 (674)
Q Consensus 200 ~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~gi~ 240 (674)
++.|++.++++ ++.++|.-+......+.+.+|+.
T Consensus 90 ~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~~l~ 123 (175)
T TIGR01493 90 PPWPDSAAALA-------RVAILSNASHWAFDQFAQQAGLP 123 (175)
T ss_pred CCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHCCCH
Confidence 57899999998 36677877777777777777763
No 196
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=40.56 E-value=3e+02 Score=28.57 Aligned_cols=46 Identities=20% Similarity=0.168 Sum_probs=37.1
Q ss_pred hhccEEEecCHHHHHHHHHHHHHc----CCEEEEeCCCccchhhhhhCCc
Q psy6090 320 VKGAIFARMSSDQKQQLVLELQQL----GYYVAMCGDGANDCGALRAAHA 365 (674)
Q Consensus 320 ~~~~VfaR~sP~qK~~iV~~lq~~----g~~V~m~GDG~ND~~aLk~Adv 365 (674)
.+..|..|.+-..|...++.+.+. |..+.+.||-.-|-.|++..+-
T Consensus 170 gk~vVEvrp~~~~KG~a~~~i~~~~~~~~~~~~~aGDD~TDE~~F~~v~~ 219 (266)
T COG1877 170 GKMVVELRPPGVSKGAAIKYIMDELPFDGRFPIFAGDDLTDEDAFAAVNK 219 (266)
T ss_pred CceEEEEeeCCcchHHHHHHHHhcCCCCCCcceecCCCCccHHHHHhhcc
Confidence 456788888888899999966654 3358899999999999998873
No 197
>PF11286 DUF3087: Protein of unknown function (DUF3087); InterPro: IPR021438 This family of proteins with unknown function appears to be restricted to Gammaproteobacteria.
Probab=40.24 E-value=52 Score=31.36 Aligned_cols=33 Identities=9% Similarity=0.147 Sum_probs=20.5
Q ss_pred hhhhcceecCCCCCcHHHHHHHHHHHHHHHHHHHH
Q psy6090 575 FIIQFLQLRFPPNMQFPLIVIYLAICNFVLSLFIE 609 (674)
Q Consensus 575 ~l~~~~~l~~~p~~~~~~~l~~~~~~~~~~~~~~e 609 (674)
.+-.+|+ ..+...|++-+++.++..++++.++.
T Consensus 36 llI~lFg--~~~~~nf~~NllGVil~~~~~~~~l~ 68 (165)
T PF11286_consen 36 LLIALFG--GESGGNFHWNLLGVILGLLLTSALLR 68 (165)
T ss_pred HHHHHcC--CCCCCceeeeHHHHHHHHHHHHHHHH
Confidence 3445566 22335677777777777777776666
No 198
>PTZ00445 p36-lilke protein; Provisional
Probab=40.01 E-value=58 Score=32.51 Aligned_cols=75 Identities=19% Similarity=0.102 Sum_probs=44.6
Q ss_pred chHHHHHHHHHhhcCcEEEEEeeecccccchHHHhhhchhhhcccceeeeeehhccCCCcchHHHHHHHHhcCCeEEEEc
Q psy6090 144 PENIVSVLSEYTEQGYRVIALASRTLSIDDYKHLNYMKREDIEKDLEFLGLIILENRLKPQTEGVIKELKDARVKVVMIT 223 (674)
Q Consensus 144 p~~~~~~l~~~~~~G~Rvla~A~k~l~~~~~~~~~~~~r~~iE~dL~flGli~~en~lk~~t~~~I~~L~~agIrvvmiT 223 (674)
.+..+...+.+.+.|.|++++=+-.-- .. ...--+.+-.++.. .+-..+.|+.+.-+++|+++||+++++|
T Consensus 28 ~~~~~~~v~~L~~~GIk~Va~D~DnTl-I~---~HsgG~~~~~~~~~-----~~~~~~tpefk~~~~~l~~~~I~v~VVT 98 (219)
T PTZ00445 28 HESADKFVDLLNECGIKVIASDFDLTM-IT---KHSGGYIDPDNDDI-----RVLTSVTPDFKILGKRLKNSNIKISVVT 98 (219)
T ss_pred HHHHHHHHHHHHHcCCeEEEecchhhh-hh---hhcccccCCCcchh-----hhhccCCHHHHHHHHHHHHCCCeEEEEE
Confidence 345566777889999999998542110 00 00000000001111 1223478999999999999999999999
Q ss_pred CCCH
Q psy6090 224 GDNI 227 (674)
Q Consensus 224 GDn~ 227 (674)
=-..
T Consensus 99 fSd~ 102 (219)
T PTZ00445 99 FSDK 102 (219)
T ss_pred ccch
Confidence 4433
No 199
>KOG3040|consensus
Probab=39.36 E-value=55 Score=32.49 Aligned_cols=56 Identities=23% Similarity=0.366 Sum_probs=44.4
Q ss_pred ceeeeeehhccCCCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHH---HcCCCCCCC
Q psy6090 189 LEFLGLIILENRLKPQTEGVIKELKDARVKVVMITGDNIQTAISVAK---ECGIIDPGE 244 (674)
Q Consensus 189 L~flGli~~en~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~---~~gi~~~~~ 244 (674)
+.+-|.+-.|+-.-|++.++++.||+++.+|..+|.-....-..+.+ .||+.-..+
T Consensus 12 lDlSGtLh~e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf~v~ee 70 (262)
T KOG3040|consen 12 LDLSGTLHIEDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGFDVSEE 70 (262)
T ss_pred EeccceEecccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCCCccHH
Confidence 35668899999999999999999999999999999877766666554 467654333
No 200
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=37.02 E-value=55 Score=33.14 Aligned_cols=72 Identities=19% Similarity=0.186 Sum_probs=45.1
Q ss_pred HHHHHHHHhhcCcEEEEEeeecccccchHHHhhhchhhhcccceeeeeeh-----hc---cCCCcch--H-HHHHHHHhc
Q psy6090 147 IVSVLSEYTEQGYRVIALASRTLSIDDYKHLNYMKREDIEKDLEFLGLII-----LE---NRLKPQT--E-GVIKELKDA 215 (674)
Q Consensus 147 ~~~~l~~~~~~G~Rvla~A~k~l~~~~~~~~~~~~r~~iE~dL~flGli~-----~e---n~lk~~t--~-~~I~~L~~a 215 (674)
-.+.++.+.++|.+|+-+.-|.-. .|+..+.+|.=.|+-+ |+ +.-++.+ + +.-+++.+.
T Consensus 125 al~l~~~l~~~G~~Vf~lTGR~e~----------~r~~T~~nL~~~G~~~~~~LiLR~~~d~~~~~~~yKs~~R~~l~~~ 194 (229)
T TIGR01675 125 GLKLYQKIIELGIKIFLLSGRWEE----------LRNATLDNLINAGFTGWKHLILRGLEDSNKTVVTYKSEVRKSLMEE 194 (229)
T ss_pred HHHHHHHHHHCCCEEEEEcCCChH----------HHHHHHHHHHHcCCCCcCeeeecCCCCCCchHhHHHHHHHHHHHhC
Confidence 346777888999999999988532 1223333443344433 32 2222222 2 334478889
Q ss_pred CCeEEEEcCCCHh
Q psy6090 216 RVKVVMITGDNIQ 228 (674)
Q Consensus 216 gIrvvmiTGDn~~ 228 (674)
|+++++.-||+..
T Consensus 195 GYrIv~~iGDq~s 207 (229)
T TIGR01675 195 GYRIWGNIGDQWS 207 (229)
T ss_pred CceEEEEECCChH
Confidence 9999999999974
No 201
>PRK08508 biotin synthase; Provisional
Probab=36.73 E-value=1.6e+02 Score=30.71 Aligned_cols=92 Identities=20% Similarity=0.145 Sum_probs=52.1
Q ss_pred chHHHHHHHHHhhcCcEEEEEe--eecccccchHHHhhhchhhhcc--cceeeeeehhccCCCcchHHHHHHHHhcCCeE
Q psy6090 144 PENIVSVLSEYTEQGYRVIALA--SRTLSIDDYKHLNYMKREDIEK--DLEFLGLIILENRLKPQTEGVIKELKDARVKV 219 (674)
Q Consensus 144 p~~~~~~l~~~~~~G~Rvla~A--~k~l~~~~~~~~~~~~r~~iE~--dL~flGli~~en~lk~~t~~~I~~L~~agIrv 219 (674)
|+++.+..+...++|.+-+++. .+.+++..++.+.++-|.--+. ++...... -.-+.+.+++|++||+.-
T Consensus 42 ~eeI~~~a~~a~~~g~~~~~lv~sg~~~~~~~~e~~~ei~~~ik~~~p~l~i~~s~------G~~~~e~l~~Lk~aGld~ 115 (279)
T PRK08508 42 IEQIVQEAKMAKANGALGFCLVTSGRGLDDKKLEYVAEAAKAVKKEVPGLHLIACN------GTASVEQLKELKKAGIFS 115 (279)
T ss_pred HHHHHHHHHHHHHCCCCEEEEEeccCCCCcccHHHHHHHHHHHHhhCCCcEEEecC------CCCCHHHHHHHHHcCCCE
Confidence 6777777777677888777763 3333333333333322221122 22222222 222699999999999844
Q ss_pred E-------------EEcCCCHhh---HHHHHHHcCCCC
Q psy6090 220 V-------------MITGDNIQT---AISVAKECGIID 241 (674)
Q Consensus 220 v-------------miTGDn~~T---A~~vA~~~gi~~ 241 (674)
+ ++||....- ++..|+++|+..
T Consensus 116 ~~~~lEt~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v 153 (279)
T PRK08508 116 YNHNLETSKEFFPKICTTHTWEERFQTCENAKEAGLGL 153 (279)
T ss_pred EcccccchHHHhcCCCCCCCHHHHHHHHHHHHHcCCee
Confidence 3 456665555 555689999743
No 202
>PRK12581 oxaloacetate decarboxylase; Provisional
Probab=36.72 E-value=3.1e+02 Score=30.90 Aligned_cols=97 Identities=23% Similarity=0.282 Sum_probs=69.3
Q ss_pred chHHHHHHHHHhhcCcEEEEE--------eeecccccchHHHhhhchhhhcccce--eee--eehhccCCCcchHHHHHH
Q psy6090 144 PENIVSVLSEYTEQGYRVIAL--------ASRTLSIDDYKHLNYMKREDIEKDLE--FLG--LIILENRLKPQTEGVIKE 211 (674)
Q Consensus 144 p~~~~~~l~~~~~~G~Rvla~--------A~k~l~~~~~~~~~~~~r~~iE~dL~--flG--li~~en~lk~~t~~~I~~ 211 (674)
.++.......+.+-|+..|=+ |+|.+.+.+|+....+.+.--+..+. +.| +++..+-+..=+...++.
T Consensus 34 t~d~l~ia~~ld~~G~~siE~wGGAtfd~~~rfl~edpwerlr~~r~~~~nt~lqmLlRG~n~vgy~~ypddvv~~fv~~ 113 (468)
T PRK12581 34 IEDMLPVLTILDKIGYYSLECWGGATFDACIRFLNEDPWERLRTLKKGLPNTRLQMLLRGQNLLGYRHYADDIVDKFISL 113 (468)
T ss_pred HHHHHHHHHHHHhcCCCEEEecCCcchhhhhcccCCCHHHHHHHHHHhCCCCceeeeeccccccCccCCcchHHHHHHHH
Confidence 567888888899999998765 47778877887766543322222222 334 355666666667888999
Q ss_pred HHhcCCeEEEEc-----CCCHhhHHHHHHHcCCC
Q psy6090 212 LKDARVKVVMIT-----GDNIQTAISVAKECGII 240 (674)
Q Consensus 212 L~~agIrvvmiT-----GDn~~TA~~vA~~~gi~ 240 (674)
..+.||.++-+. -||...++..+++.|..
T Consensus 114 a~~~Gidi~Rifd~lnd~~n~~~ai~~ak~~G~~ 147 (468)
T PRK12581 114 SAQNGIDVFRIFDALNDPRNIQQALRAVKKTGKE 147 (468)
T ss_pred HHHCCCCEEEEcccCCCHHHHHHHHHHHHHcCCE
Confidence 999999987664 36778888999999985
No 203
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=36.33 E-value=1.8e+02 Score=28.61 Aligned_cols=91 Identities=10% Similarity=0.177 Sum_probs=54.2
Q ss_pred cchHHHHHHHHHhhcCcEEEEEeeecccccchHHHhhhchhhhc--ccceeeeeehhcc--CCCcchHHHHHHHHhcCCe
Q psy6090 143 VPENIVSVLSEYTEQGYRVIALASRTLSIDDYKHLNYMKREDIE--KDLEFLGLIILEN--RLKPQTEGVIKELKDARVK 218 (674)
Q Consensus 143 ~p~~~~~~l~~~~~~G~Rvla~A~k~l~~~~~~~~~~~~r~~iE--~dL~flGli~~en--~lk~~t~~~I~~L~~agIr 218 (674)
+.+...+.++.+.++|+++-.+.-+.-.... ..+.+-.++ +- |-.+++-++ .-||+-.-....+++.|+.
T Consensus 88 l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~----~~l~~~~l~~~~~--f~~i~~~~~~~~~KP~p~~~~~a~~~~~~~ 161 (220)
T TIGR03351 88 ALPGAEEAFRSLRSSGIKVALTTGFDRDTAE----RLLEKLGWTVGDD--VDAVVCPSDVAAGRPAPDLILRAMELTGVQ 161 (220)
T ss_pred cCCCHHHHHHHHHHCCCEEEEEeCCchHHHH----HHHHHhhhhhhcc--CCEEEcCCcCCCCCCCHHHHHHHHHHcCCC
Confidence 4567788999999999997666544322110 111122222 11 223333333 3456554444556666764
Q ss_pred ---EEEEcCCCHhhHHHHHHHcCCC
Q psy6090 219 ---VVMITGDNIQTAISVAKECGII 240 (674)
Q Consensus 219 ---vvmiTGDn~~TA~~vA~~~gi~ 240 (674)
-++.-||.. +-+.-|+.+|+-
T Consensus 162 ~~~~~~~igD~~-~Di~aa~~aG~~ 185 (220)
T TIGR03351 162 DVQSVAVAGDTP-NDLEAGINAGAG 185 (220)
T ss_pred ChhHeEEeCCCH-HHHHHHHHCCCC
Confidence 477788997 789999999994
No 204
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=35.58 E-value=2.3e+02 Score=25.26 Aligned_cols=94 Identities=18% Similarity=0.279 Sum_probs=52.7
Q ss_pred cchHHHHHHHHHhhcCcEEEEEeeecccccc---hHHHh-hhchhhhcccceeeeeehhccCCCcchHHHHHHHHhc-CC
Q psy6090 143 VPENIVSVLSEYTEQGYRVIALASRTLSIDD---YKHLN-YMKREDIEKDLEFLGLIILENRLKPQTEGVIKELKDA-RV 217 (674)
Q Consensus 143 ~p~~~~~~l~~~~~~G~Rvla~A~k~l~~~~---~~~~~-~~~r~~iE~dL~flGli~~en~lk~~t~~~I~~L~~a-gI 217 (674)
..++..+.++.+..+|+++..+.-+...... ..... .+.+-.++.+..+ ... ...||...-...-+++. ++
T Consensus 26 ~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~~~~--~~~--~~~KP~~~~~~~~~~~~~~~ 101 (132)
T TIGR01662 26 LYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPIDVLY--ACP--HCRKPKPGMFLEALKRFNEI 101 (132)
T ss_pred eCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEEEEE--ECC--CCCCCChHHHHHHHHHcCCC
Confidence 3466778999999999999998876522100 00111 1112122222221 111 23455444444444555 35
Q ss_pred --eEEEEcCCCHhhHHHHHHHcCCC
Q psy6090 218 --KVVMITGDNIQTAISVAKECGII 240 (674)
Q Consensus 218 --rvvmiTGDn~~TA~~vA~~~gi~ 240 (674)
.-++.=||+..+-+..|+++|+.
T Consensus 102 ~~~~~v~IGD~~~~Di~~A~~~Gi~ 126 (132)
T TIGR01662 102 DPEESVYVGDQDLTDLQAAKRAGLA 126 (132)
T ss_pred ChhheEEEcCCCcccHHHHHHCCCe
Confidence 33666799777888999999983
No 205
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=35.12 E-value=44 Score=34.33 Aligned_cols=26 Identities=19% Similarity=0.153 Sum_probs=21.0
Q ss_pred CCEEEEeCCCc-cchhhhhhCCcceee
Q psy6090 344 GYYVAMCGDGA-NDCGALRAAHAGISL 369 (674)
Q Consensus 344 g~~V~m~GDG~-ND~~aLk~AdvGIam 369 (674)
...++|+||.. +|..+=+.|++--.+
T Consensus 196 ~~~~~~vGD~~~~Di~~a~~~G~~~i~ 222 (257)
T TIGR01458 196 PEEAVMIGDDCRDDVGGAQDCGMRGIQ 222 (257)
T ss_pred hhhEEEECCCcHHHHHHHHHcCCeEEE
Confidence 46899999996 899998888875444
No 206
>PRK10444 UMP phosphatase; Provisional
Probab=33.78 E-value=2e+02 Score=29.37 Aligned_cols=27 Identities=22% Similarity=0.027 Sum_probs=22.4
Q ss_pred CCEEEEeCCCc-cchhhhhhCCcceeec
Q psy6090 344 GYYVAMCGDGA-NDCGALRAAHAGISLS 370 (674)
Q Consensus 344 g~~V~m~GDG~-ND~~aLk~AdvGIams 370 (674)
...++|+||.. +|..+=+.|++--.+-
T Consensus 191 ~~~~v~IGD~~~tDi~~A~~~G~~~vlV 218 (248)
T PRK10444 191 SEETVIVGDNLRTDILAGFQAGLETILV 218 (248)
T ss_pred cccEEEECCCcHHHHHHHHHcCCCEEEE
Confidence 46899999997 8999999998865543
No 207
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=33.58 E-value=2.4e+02 Score=35.10 Aligned_cols=40 Identities=23% Similarity=0.309 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHc-C----CEEEEeCCCcc-c-hhhhhhCCcceeecC
Q psy6090 332 QKQQLVLELQQL-G----YYVAMCGDGAN-D-CGALRAAHAGISLSE 371 (674)
Q Consensus 332 qK~~iV~~lq~~-g----~~V~m~GDG~N-D-~~aLk~AdvGIams~ 371 (674)
.|.+.++.|..+ | .+++++||..| | -.||.--|-+|-+.+
T Consensus 956 SKgqAlRyL~~rwgi~l~~v~VfaGdSGntD~e~Ll~G~~~tvi~~g 1002 (1050)
T TIGR02468 956 SRSQALRYLFVRWGIELANMAVFVGESGDTDYEGLLGGLHKTVILKG 1002 (1050)
T ss_pred CHHHHHHHHHHHcCCChHHeEEEeccCCCCCHHHHhCCceeEEEEec
Confidence 699999998764 3 46678999999 9 668888899998865
No 208
>cd01391 Periplasmic_Binding_Protein_Type_1 Type 1 periplasmic binding fold superfamily. Type 1 periplasmic binding fold superfamily. This model and hierarchy represent the ligand binding domains of the LacI family of transcriptional regulators, periplasmic binding proteins of the ABC-type transport systems, the family C G-protein couples receptors (GPCRs), membrane bound guanylyl cyclases including the family of natriuretic peptide receptors (NPRs), and the N-terminal leucine/isoleucine/valine- binding protein (LIVBP)-like domains of the ionotropic glutamate receptors (iGluRs). In LacI-like transcriptional regulator and the bacterial periplasmic binding proteins the ligands are monosaccharides including lactose, ribose, fructose, xylose, arabinose, galactose/glucose, and other sugars, with a few exceptions. Periplasmic sugar binding proteins are one of the components of ABC transporters and are involved in the active transport of water-soluble ligands. The LacI family of proteins con
Probab=33.39 E-value=3.5e+02 Score=26.15 Aligned_cols=104 Identities=13% Similarity=0.164 Sum_probs=60.0
Q ss_pred HHHHHHHHHhhcCcEEEEEeeecccccchHHHhhhchhhhc-ccceeeeeehhccCCCcchHHHHHHHHhc-CCeEEEEc
Q psy6090 146 NIVSVLSEYTEQGYRVIALASRTLSIDDYKHLNYMKREDIE-KDLEFLGLIILENRLKPQTEGVIKELKDA-RVKVVMIT 223 (674)
Q Consensus 146 ~~~~~l~~~~~~G~Rvla~A~k~l~~~~~~~~~~~~r~~iE-~dL~flGli~~en~lk~~t~~~I~~L~~a-gIrvvmiT 223 (674)
......+.+.++|.|-+++-+-.-. .........-++.++ .+............-..+...+.+.+++. +.+.+++.
T Consensus 111 ~~~~~~~~l~~~~~~~i~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~ 189 (269)
T cd01391 111 AGEAAAEYLAEKGWKRVALIYGDDG-AYGRERLEGFKAALKKAGIEVVAIEYGDLDTEKGFQALLQLLKAAPKPDAIFAC 189 (269)
T ss_pred HHHHHHHHHHHhCCceEEEEecCCc-chhhHHHHHHHHHHHhcCcEEEeccccCCCccccHHHHHHHHhcCCCCCEEEEc
Confidence 3456677788888888888775442 111111111222333 33555544444433334557777778877 78888888
Q ss_pred CCCH-hhHHHHHHHcCCCCCCCeEEEEe
Q psy6090 224 GDNI-QTAISVAKECGIIDPGETVVDVS 250 (674)
Q Consensus 224 GDn~-~TA~~vA~~~gi~~~~~~vi~~~ 250 (674)
+|.. ..+...+++.|+.+.+-.++..+
T Consensus 190 ~~~~a~~~~~~~~~~g~~~~~~~ii~~~ 217 (269)
T cd01391 190 NDEMAAGALKAAREAGLTPGDISIIGFD 217 (269)
T ss_pred CchHHHHHHHHHHHcCCCCCCCEEEecc
Confidence 8743 34557788899973333444443
No 209
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=32.70 E-value=67 Score=31.02 Aligned_cols=39 Identities=18% Similarity=0.178 Sum_probs=30.1
Q ss_pred CCcchHHHHHHHHhcCCeEEEEcCCCHh----hHHHHHHHcCC
Q psy6090 201 LKPQTEGVIKELKDARVKVVMITGDNIQ----TAISVAKECGI 239 (674)
Q Consensus 201 lk~~t~~~I~~L~~agIrvvmiTGDn~~----TA~~vA~~~gi 239 (674)
+|+-+++.|..-.+-|=.++.+||+..- ++...|+...|
T Consensus 115 PKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i 157 (237)
T COG3700 115 PKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHI 157 (237)
T ss_pred hHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhccc
Confidence 4666788888888999999999999864 44556666666
No 210
>cd02069 methionine_synthase_B12_BD B12 binding domain of methionine synthase. This domain binds methylcobalamin, which it uses as an intermediate methyl carrier from methyltetrahydrofolate (CH3H4folate) to homocysteine (Hcy).
Probab=31.55 E-value=46 Score=33.30 Aligned_cols=72 Identities=18% Similarity=0.243 Sum_probs=55.3
Q ss_pred HHHhhcCcEEEEEeeecccccchHHHhhhchhhhcccceeeeeehhccCCCcchHHHHHHHHhcCCeEEEEcCCCHhhH
Q psy6090 152 SEYTEQGYRVIALASRTLSIDDYKHLNYMKREDIEKDLEFLGLIILENRLKPQTEGVIKELKDARVKVVMITGDNIQTA 230 (674)
Q Consensus 152 ~~~~~~G~Rvla~A~k~l~~~~~~~~~~~~r~~iE~dL~flGli~~en~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA 230 (674)
..+..+|++|+-++...=. + ++-+--.|.+-.++|+-.+...-.+..++.+++|+++|.++.++=|-.+.+-
T Consensus 110 ~~l~~~G~~Vi~LG~~vp~-e------~~v~~~~~~~~~~V~lS~~~~~~~~~~~~~i~~L~~~~~~~~i~vGG~~~~~ 181 (213)
T cd02069 110 VILSNNGYEVIDLGVMVPI-E------KILEAAKEHKADIIGLSGLLVPSLDEMVEVAEEMNRRGIKIPLLIGGAATSR 181 (213)
T ss_pred HHHHhCCCEEEECCCCCCH-H------HHHHHHHHcCCCEEEEccchhccHHHHHHHHHHHHhcCCCCeEEEEChhcCH
Confidence 4667899999999964322 2 2223345678899999999999999999999999999998877666665543
No 211
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=31.26 E-value=42 Score=31.85 Aligned_cols=23 Identities=26% Similarity=0.527 Sum_probs=20.6
Q ss_pred CCcchHHHHHHHHhcCCeEEEEc
Q psy6090 201 LKPQTEGVIKELKDARVKVVMIT 223 (674)
Q Consensus 201 lk~~t~~~I~~L~~agIrvvmiT 223 (674)
+.+++.++|++|++.|++++|+|
T Consensus 30 ~~~~v~~~L~~l~~~Gy~IvIvT 52 (159)
T PF08645_consen 30 FPPGVPEALRELHKKGYKIVIVT 52 (159)
T ss_dssp C-TTHHHHHHHHHHTTEEEEEEE
T ss_pred cchhHHHHHHHHHhcCCeEEEEe
Confidence 34679999999999999999999
No 212
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=30.12 E-value=77 Score=29.93 Aligned_cols=45 Identities=18% Similarity=0.112 Sum_probs=39.2
Q ss_pred ehhccCCCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCCC
Q psy6090 195 IILENRLKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKECGII 240 (674)
Q Consensus 195 i~~en~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~gi~ 240 (674)
....-+++|++.+.+++|++. +++.++|.-....|..+.+.++..
T Consensus 53 ~~~~v~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl~~ldp~ 97 (156)
T TIGR02250 53 MWYLTKLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIAKLIDPD 97 (156)
T ss_pred eEEEEEECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHHHHhCcC
Confidence 344556899999999999955 999999999999999999999874
No 213
>cd03409 Chelatase_Class_II Class II Chelatase: a family of ATP-independent monomeric or homodimeric enzymes that catalyze the insertion of metal into protoporphyrin rings. This family includes protoporphyrin IX ferrochelatase (HemH), sirohydrochlorin ferrochelatase (SirB) and the cobaltochelatases, CbiK and CbiX. HemH and SirB are involved in heme and siroheme biosynthesis, respectively, while the cobaltochelatases are associated with cobalamin biosynthesis. Excluded from this family are the ATP-dependent heterotrimeric chelatases (class I) and the multifunctional homodimeric enzymes with dehydrogenase and chelatase activities (class III).
Probab=29.96 E-value=1.2e+02 Score=25.74 Aligned_cols=28 Identities=29% Similarity=0.453 Sum_probs=20.8
Q ss_pred eehhccCCCcchHHHHHHHHhcCCeEEE
Q psy6090 194 LIILENRLKPQTEGVIKELKDARVKVVM 221 (674)
Q Consensus 194 li~~en~lk~~t~~~I~~L~~agIrvvm 221 (674)
.++|.....|.+.+++++|++.|++-++
T Consensus 36 ~~a~~~~~~P~i~~~l~~l~~~g~~~vv 63 (101)
T cd03409 36 YVGFQSGLGPDTEEAIRELAEEGYQRVV 63 (101)
T ss_pred EEEEECCCCCCHHHHHHHHHHcCCCeEE
Confidence 3444444789999999999999975443
No 214
>cd05017 SIS_PGI_PMI_1 The members of this protein family contain the SIS (Sugar ISomerase) domain and have both the phosphoglucose isomerase (PGI) and the phosphomannose isomerase (PMI) functions. These functions catalyze the reversible reactions of glucose 6-phosphate to fructose 6-phosphate, and mannose 6-phosphate to fructose 6-phosphate, respectively at an equal rate. This protein contains two SIS domains. This alignment is based on the first SIS domain.
Probab=29.63 E-value=64 Score=28.65 Aligned_cols=36 Identities=25% Similarity=0.366 Sum_probs=27.5
Q ss_pred CCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcC
Q psy6090 201 LKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKECG 238 (674)
Q Consensus 201 lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~g 238 (674)
=-+++.++++.+++.|++++.+|++.. -...+.+-|
T Consensus 55 ~t~e~i~~~~~a~~~g~~iI~IT~~~~--l~~~~~~~~ 90 (119)
T cd05017 55 NTEETLSAVEQAKERGAKIVAITSGGK--LLEMAREHG 90 (119)
T ss_pred CCHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHcC
Confidence 457889999999999999999999874 223454444
No 215
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=29.18 E-value=2.9e+02 Score=33.58 Aligned_cols=36 Identities=19% Similarity=0.253 Sum_probs=29.7
Q ss_pred CCcchHHHHHHHHhc-CCeEEEEcCCCHhhHHHHHHH
Q psy6090 201 LKPQTEGVIKELKDA-RVKVVMITGDNIQTAISVAKE 236 (674)
Q Consensus 201 lk~~t~~~I~~L~~a-gIrvvmiTGDn~~TA~~vA~~ 236 (674)
+.+++.++++.|.+. +..|+++||+...+.......
T Consensus 533 p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~ 569 (797)
T PLN03063 533 LHPELKETLKALCSDPKTTVVVLSRSGKDILDKNFGE 569 (797)
T ss_pred CCHHHHHHHHHHHcCCCCEEEEEeCCCHHHHHHHhCC
Confidence 556788899999865 789999999999988877654
No 216
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=29.07 E-value=2.6e+02 Score=27.04 Aligned_cols=89 Identities=18% Similarity=0.234 Sum_probs=53.5
Q ss_pred chHHHHHHHHHhhcCcEEEEEeeecccccchHHHhhhchhhhcccceeeeeehhcc--CCCcchHHHHHHHHhcCCeE--
Q psy6090 144 PENIVSVLSEYTEQGYRVIALASRTLSIDDYKHLNYMKREDIEKDLEFLGLIILEN--RLKPQTEGVIKELKDARVKV-- 219 (674)
Q Consensus 144 p~~~~~~l~~~~~~G~Rvla~A~k~l~~~~~~~~~~~~r~~iE~dL~flGli~~en--~lk~~t~~~I~~L~~agIrv-- 219 (674)
.++..+.++.+.++|+++..+.-+.-.... ..+.+-.+.. .|=.+++-++ ..||...-..+-+++.|+..
T Consensus 77 ~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~----~~l~~~~l~~--~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~ 150 (205)
T TIGR01454 77 FPGVPELLAELRADGVGTAIATGKSGPRAR----SLLEALGLLP--LFDHVIGSDEVPRPKPAPDIVREALRLLDVPPED 150 (205)
T ss_pred CCCHHHHHHHHHHCCCeEEEEeCCchHHHH----HHHHHcCChh--heeeEEecCcCCCCCCChHHHHHHHHHcCCChhh
Confidence 456778999999999998887765322100 0111111111 1112222222 35676655566667777654
Q ss_pred EEEcCCCHhhHHHHHHHcCC
Q psy6090 220 VMITGDNIQTAISVAKECGI 239 (674)
Q Consensus 220 vmiTGDn~~TA~~vA~~~gi 239 (674)
++.-||+. .-+..|++.|+
T Consensus 151 ~l~igD~~-~Di~aA~~~Gi 169 (205)
T TIGR01454 151 AVMVGDAV-TDLASARAAGT 169 (205)
T ss_pred eEEEcCCH-HHHHHHHHcCC
Confidence 78889986 67889999999
No 217
>PF08510 PIG-P: PIG-P; InterPro: IPR013717 PIG-P (phosphatidylinositol N-acetylglucosaminyltransferase subunit P) is an enzyme involved in GPI anchor biosynthesis [].
Probab=28.67 E-value=1.9e+02 Score=26.26 Aligned_cols=55 Identities=15% Similarity=0.325 Sum_probs=34.3
Q ss_pred hHHHHHHHHHHHHH--HhhcccchhhhhcceecCCCCCcHHHHHHHHHHHHHHHHHHH
Q psy6090 553 LFILSIIIMTWVCI--YITLIPSEFIIQFLQLRFPPNMQFPLIVIYLAICNFVLSLFI 608 (674)
Q Consensus 553 ~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~l~~~p~~~~~~~l~~~~~~~~~~~~~~ 608 (674)
.|...++..+++.+ +-.+.|.+++.. +++.-.|+..|.+.+=.+.++.++..+++
T Consensus 7 GFv~~i~s~~~~~lyl~Wa~lP~~~L~~-lgity~P~kyWAlaiP~~~l~~~l~~~~~ 63 (126)
T PF08510_consen 7 GFVLYILSTVAFVLYLLWAFLPDEWLHS-LGITYYPDKYWALAIPSWLLMAMLFTYVG 63 (126)
T ss_pred ehHHHHHHHHHHHHHHHHHhcCHHHHHh-cCccccCcchHHHHHHHHHHHHHHHHHHH
Confidence 34444444444433 345667777777 79999998888877766666655554443
No 218
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=28.67 E-value=3.9e+02 Score=25.91 Aligned_cols=90 Identities=13% Similarity=0.155 Sum_probs=50.1
Q ss_pred chHHHHHHHHHhhcCcEEEEEeeecccccchHHHhhhchhhhcccceeeeeehhcc--CCCcchHHHHHHHHhcCCe---
Q psy6090 144 PENIVSVLSEYTEQGYRVIALASRTLSIDDYKHLNYMKREDIEKDLEFLGLIILEN--RLKPQTEGVIKELKDARVK--- 218 (674)
Q Consensus 144 p~~~~~~l~~~~~~G~Rvla~A~k~l~~~~~~~~~~~~r~~iE~dL~flGli~~en--~lk~~t~~~I~~L~~agIr--- 218 (674)
.+...+.++.+.++|+|+..+.-..-.... ......+..+..-+. +.+.-++ ..||+..-...-+++.|++
T Consensus 96 ~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~--~~~~~~~~~l~~~fd--~v~~s~~~~~~KP~p~~~~~~~~~~g~~~~~ 171 (211)
T TIGR02247 96 RPSMMAAIKTLRAKGFKTACITNNFPTDHS--AEEALLPGDIMALFD--AVVESCLEGLRKPDPRIYQLMLERLGVAPEE 171 (211)
T ss_pred ChhHHHHHHHHHHCCCeEEEEeCCCCccch--hhhHhhhhhhHhhCC--EEEEeeecCCCCCCHHHHHHHHHHcCCCHHH
Confidence 355778899999999998887643221100 000111111211111 2222221 2466665555666677764
Q ss_pred EEEEcCCCHhhHHHHHHHcCC
Q psy6090 219 VVMITGDNIQTAISVAKECGI 239 (674)
Q Consensus 219 vvmiTGDn~~TA~~vA~~~gi 239 (674)
++|+ ||. ..-+..|+++|+
T Consensus 172 ~l~i-~D~-~~di~aA~~aG~ 190 (211)
T TIGR02247 172 CVFL-DDL-GSNLKPAAALGI 190 (211)
T ss_pred eEEE-cCC-HHHHHHHHHcCC
Confidence 7888 876 446788999999
No 219
>PRK09490 metH B12-dependent methionine synthase; Provisional
Probab=28.55 E-value=54 Score=41.35 Aligned_cols=78 Identities=17% Similarity=0.212 Sum_probs=61.6
Q ss_pred HHhhcCcEEEEEeeecccccchHHHhhhchhhhcccceeeeeehhccCCCcchHHHHHHHHhcCCeEEEEcCCCHhhHHH
Q psy6090 153 EYTEQGYRVIALASRTLSIDDYKHLNYMKREDIEKDLEFLGLIILENRLKPQTEGVIKELKDARVKVVMITGDNIQTAIS 232 (674)
Q Consensus 153 ~~~~~G~Rvla~A~k~l~~~~~~~~~~~~r~~iE~dL~flGli~~en~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~ 232 (674)
-+...||+|+=++.+.=. ++ +-..-.|.+-.++|+-++-.+--++.++++++|+++|.++.++=|-...|-..
T Consensus 774 ~L~~~GfeVIdLG~~vp~-e~------iv~aa~e~~~diVgLS~L~t~s~~~m~~~i~~L~~~g~~v~v~vGGa~~s~~~ 846 (1229)
T PRK09490 774 VLQCNNYEVIDLGVMVPA-EK------ILETAKEENADIIGLSGLITPSLDEMVHVAKEMERQGFTIPLLIGGATTSKAH 846 (1229)
T ss_pred HHHhCCCEEEECCCCCCH-HH------HHHHHHHhCCCEEEEcCcchhhHHHHHHHHHHHHhcCCCCeEEEEeeccchhh
Confidence 567889999988875432 11 22234467889999999999999999999999999999998888888888777
Q ss_pred HHHHc
Q psy6090 233 VAKEC 237 (674)
Q Consensus 233 vA~~~ 237 (674)
+|.++
T Consensus 847 ta~~i 851 (1229)
T PRK09490 847 TAVKI 851 (1229)
T ss_pred hhhhh
Confidence 77665
No 220
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=27.94 E-value=50 Score=32.08 Aligned_cols=41 Identities=20% Similarity=0.250 Sum_probs=29.4
Q ss_pred CCCcchHHHHHHHHhcCCeEEEEcCCCHh--------hHHHHHHHcCCC
Q psy6090 200 RLKPQTEGVIKELKDARVKVVMITGDNIQ--------TAISVAKECGII 240 (674)
Q Consensus 200 ~lk~~t~~~I~~L~~agIrvvmiTGDn~~--------TA~~vA~~~gi~ 240 (674)
++-|++.+++++|++.|...+++|+++.. |..-+.+.+|-+
T Consensus 73 ~p~~gA~e~l~~L~~~g~~~~~Itar~~~~~~~~~~~k~~Wl~~hf~~i 121 (191)
T PF06941_consen 73 PPIPGAVEALKKLRDKGHEIVIITARPPEFPDHSAEEKREWLERHFPFI 121 (191)
T ss_dssp -B-TTHHHHHHHHHTSTTEEEEEEE-SSSSGCCCHHHHHHHHHHHHTHH
T ss_pred CccHHHHHHHHHHHHcCCcEEEEEecCccccchHHHHHHHHHHHHcCCC
Confidence 46789999999999999999999988754 334455555543
No 221
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=27.56 E-value=94 Score=29.44 Aligned_cols=44 Identities=11% Similarity=0.024 Sum_probs=38.8
Q ss_pred hhccCCCcchHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCCC
Q psy6090 196 ILENRLKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKECGII 240 (674)
Q Consensus 196 ~~en~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~gi~ 240 (674)
.+--..||++.+.+++|++. +.+++.|--....|..+.+.++..
T Consensus 38 ~~~v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp~ 81 (162)
T TIGR02251 38 PVYVFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDRG 81 (162)
T ss_pred EEEEEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCcC
Confidence 44456899999999999987 999999999999999999988863
No 222
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=27.31 E-value=3.1e+02 Score=26.79 Aligned_cols=91 Identities=24% Similarity=0.312 Sum_probs=54.0
Q ss_pred chHHHHHHHHHhhcCcEEEEEeeecccccchHHHhhhchhhhcccceeeeeehhcc--CCCcchHHHHHHHHhcCCe--E
Q psy6090 144 PENIVSVLSEYTEQGYRVIALASRTLSIDDYKHLNYMKREDIEKDLEFLGLIILEN--RLKPQTEGVIKELKDARVK--V 219 (674)
Q Consensus 144 p~~~~~~l~~~~~~G~Rvla~A~k~l~~~~~~~~~~~~r~~iE~dL~flGli~~en--~lk~~t~~~I~~L~~agIr--v 219 (674)
.++..+.++.+..+|+++..+.-..-.. .. ..+.+-.+..- |=++++-++ ..||+-.-...-+++.|+. =
T Consensus 96 ~~g~~~~L~~L~~~g~~~~i~Tn~~~~~-~~---~~l~~~~l~~~--f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~ 169 (221)
T TIGR02253 96 YPGVRDTLMELRESGYRLGIITDGLPVK-QW---EKLERLGVRDF--FDAVITSEEEGVEKPHPKIFYAALKRLGVKPEE 169 (221)
T ss_pred CCCHHHHHHHHHHCCCEEEEEeCCchHH-HH---HHHHhCChHHh--ccEEEEeccCCCCCCCHHHHHHHHHHcCCChhh
Confidence 4567788999999999966666543210 00 11122112211 111222222 2466666666667777774 3
Q ss_pred EEEcCCCHhhHHHHHHHcCCC
Q psy6090 220 VMITGDNIQTAISVAKECGII 240 (674)
Q Consensus 220 vmiTGDn~~TA~~vA~~~gi~ 240 (674)
++.=||++.+-+.-|++.|+.
T Consensus 170 ~~~igDs~~~di~~A~~aG~~ 190 (221)
T TIGR02253 170 AVMVGDRLDKDIKGAKNLGMK 190 (221)
T ss_pred EEEECCChHHHHHHHHHCCCE
Confidence 677799999899999999994
No 223
>COG2185 Sbm Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) [Lipid metabolism]
Probab=27.21 E-value=87 Score=29.23 Aligned_cols=71 Identities=21% Similarity=0.407 Sum_probs=56.8
Q ss_pred HHHHHhhcCcEEEEEeeecccccchHHHhhhchhhhcccceeeeeehhccCCCcchHHHHHHHHhcCCeEEE-EcCCCH
Q psy6090 150 VLSEYTEQGYRVIALASRTLSIDDYKHLNYMKREDIEKDLEFLGLIILENRLKPQTEGVIKELKDARVKVVM-ITGDNI 227 (674)
Q Consensus 150 ~l~~~~~~G~Rvla~A~k~l~~~~~~~~~~~~r~~iE~dL~flGli~~en~lk~~t~~~I~~L~~agIrvvm-iTGDn~ 227 (674)
.-+.|+.-|+.|+..+...-++ +.-+..+|.|-.-+|+-++.-.-+...++.++.||++|..-++ +-|-+.
T Consensus 32 ia~~l~d~GfeVi~~g~~~tp~-------e~v~aA~~~dv~vIgvSsl~g~h~~l~~~lve~lre~G~~~i~v~~GGvi 103 (143)
T COG2185 32 IARALADAGFEVINLGLFQTPE-------EAVRAAVEEDVDVIGVSSLDGGHLTLVPGLVEALREAGVEDILVVVGGVI 103 (143)
T ss_pred HHHHHHhCCceEEecCCcCCHH-------HHHHHHHhcCCCEEEEEeccchHHHHHHHHHHHHHHhCCcceEEeecCcc
Confidence 3357889999999999876652 2234568999999999999999999999999999999987655 555443
No 224
>TIGR00676 fadh2 5,10-methylenetetrahydrofolate reductase, prokaryotic form. This protein is an FAD-containing flavoprotein.
Probab=26.31 E-value=1.6e+02 Score=30.58 Aligned_cols=84 Identities=8% Similarity=0.150 Sum_probs=55.0
Q ss_pred chHHHHHHHHHhhcCcEEEEEeeecccccchHHHhhhchhhh-cccceeeeeehhccCCCcchHHHHHHHHhcCCeEEE-
Q psy6090 144 PENIVSVLSEYTEQGYRVIALASRTLSIDDYKHLNYMKREDI-EKDLEFLGLIILENRLKPQTEGVIKELKDARVKVVM- 221 (674)
Q Consensus 144 p~~~~~~l~~~~~~G~Rvla~A~k~l~~~~~~~~~~~~r~~i-E~dL~flGli~~en~lk~~t~~~I~~L~~agIrvvm- 221 (674)
.+++.+.++.+...|---+.+++-.... .......+-..-. +.++..+--+.-.|.=+.+..+.|..++++||+-++
T Consensus 14 ~~~l~~~~~~l~~~~pd~isvT~~~~~~-~~~~t~~~a~~l~~~~g~~~i~Hlt~r~~n~~~l~~~L~~~~~~Gi~nvL~ 92 (272)
T TIGR00676 14 EENLWETVDRLSPLDPDFVSVTYGAGGS-TRDRTVRIVRRIKKETGIPTVPHLTCIGATREEIREILREYRELGIRHILA 92 (272)
T ss_pred HHHHHHHHHHHhcCCCCEEEeccCCCCC-cHHHHHHHHHHHHHhcCCCeeEEeeecCCCHHHHHHHHHHHHHCCCCEEEE
Confidence 3667777788776666667777655431 1111111111111 346777777777887788899999999999998666
Q ss_pred EcCCCHh
Q psy6090 222 ITGDNIQ 228 (674)
Q Consensus 222 iTGDn~~ 228 (674)
+|||.+.
T Consensus 93 l~GD~~~ 99 (272)
T TIGR00676 93 LRGDPPK 99 (272)
T ss_pred eCCCCCC
Confidence 9999984
No 225
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=25.88 E-value=3.2e+02 Score=24.87 Aligned_cols=89 Identities=17% Similarity=0.319 Sum_probs=51.8
Q ss_pred hHHHHHHHHHhhcCcEEEEEeeecccccchHHHhhhchhhhcccceeeeeehhc-c-CCCcchHHHHHHHHhcCCeE--E
Q psy6090 145 ENIVSVLSEYTEQGYRVIALASRTLSIDDYKHLNYMKREDIEKDLEFLGLIILE-N-RLKPQTEGVIKELKDARVKV--V 220 (674)
Q Consensus 145 ~~~~~~l~~~~~~G~Rvla~A~k~l~~~~~~~~~~~~r~~iE~dL~flGli~~e-n-~lk~~t~~~I~~L~~agIrv--v 220 (674)
++..+.++.+.++|+++.++.-..-... . ..+.+-.+..- |=.++.-+ . ..||+..-..+-+++.|++. +
T Consensus 80 ~~~~~~L~~l~~~~~~~~i~Sn~~~~~~--~--~~l~~~~~~~~--f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~p~~~ 153 (176)
T PF13419_consen 80 PGVRELLERLKAKGIPLVIVSNGSRERI--E--RVLERLGLDDY--FDEIISSDDVGSRKPDPDAYRRALEKLGIPPEEI 153 (176)
T ss_dssp TTHHHHHHHHHHTTSEEEEEESSEHHHH--H--HHHHHTTHGGG--CSEEEEGGGSSSSTTSHHHHHHHHHHHTSSGGGE
T ss_pred hhhhhhhhhcccccceeEEeecCCcccc--c--ccccccccccc--cccccccchhhhhhhHHHHHHHHHHHcCCCcceE
Confidence 4567889999989999999987632210 0 11122222211 22333222 1 24555444444455556643 5
Q ss_pred EEcCCCHhhHHHHHHHcCCC
Q psy6090 221 MITGDNIQTAISVAKECGII 240 (674)
Q Consensus 221 miTGDn~~TA~~vA~~~gi~ 240 (674)
+.=||+. .-+..|++.||.
T Consensus 154 ~~vgD~~-~d~~~A~~~G~~ 172 (176)
T PF13419_consen 154 LFVGDSP-SDVEAAKEAGIK 172 (176)
T ss_dssp EEEESSH-HHHHHHHHTTSE
T ss_pred EEEeCCH-HHHHHHHHcCCe
Confidence 6668999 888999999983
No 226
>PF14336 DUF4392: Domain of unknown function (DUF4392)
Probab=25.85 E-value=43 Score=35.20 Aligned_cols=38 Identities=16% Similarity=0.406 Sum_probs=28.3
Q ss_pred CcchHHHHHHHHhcCCeEEEEcCCCHhhHHH-HHHHcCC
Q psy6090 202 KPQTEGVIKELKDARVKVVMITGDNIQTAIS-VAKECGI 239 (674)
Q Consensus 202 k~~t~~~I~~L~~agIrvvmiTGDn~~TA~~-vA~~~gi 239 (674)
-+++...=+.|+.-|.+++++|.+....+.. ..+.++.
T Consensus 62 P~GA~aLa~aL~~lG~~~~ivtd~~~~~~~~~~~~~~~~ 100 (291)
T PF14336_consen 62 PPGAAALARALQALGKEVVIVTDERCAPVVKAAVRAAGL 100 (291)
T ss_pred hHHHHHHHHHHHHcCCeEEEEECHHHHHHHHHHHHHHhh
Confidence 4566666778889999999999888776654 4455665
No 227
>PRK12330 oxaloacetate decarboxylase; Provisional
Probab=25.82 E-value=5.8e+02 Score=29.11 Aligned_cols=97 Identities=16% Similarity=0.246 Sum_probs=73.2
Q ss_pred chHHHHHHHHHhhcCcEEEEEe--------eecccccchHHHhhhchhhhcccceeee----eehhccCCCcchHHHHHH
Q psy6090 144 PENIVSVLSEYTEQGYRVIALA--------SRTLSIDDYKHLNYMKREDIEKDLEFLG----LIILENRLKPQTEGVIKE 211 (674)
Q Consensus 144 p~~~~~~l~~~~~~G~Rvla~A--------~k~l~~~~~~~~~~~~r~~iE~dL~flG----li~~en~lk~~t~~~I~~ 211 (674)
.++.....+.+.+-|+..|=+. +|.+.+.+|+....+.+.--+..+..+. +++..+-...-+...|+.
T Consensus 26 t~d~l~ia~~ld~~G~~siE~~GGatfd~~~rfl~Edpwerlr~lr~~~~nt~lqmL~Rg~N~vGy~~y~ddvv~~fv~~ 105 (499)
T PRK12330 26 MEDMVGACEDIDNAGYWSVECWGGATFDACIRFLNEDPWERLRTFRKLMPNSRLQMLLRGQNLLGYRHYEDEVVDRFVEK 105 (499)
T ss_pred HHHHHHHHHHHHhcCCCEEEecCCcchhhhhcccCCCHHHHHHHHHHhCCCCeEEEEEcccccCCccCcchhHHHHHHHH
Confidence 5677788888999999888665 6678877888776665544445555555 667777777778889999
Q ss_pred HHhcCCeEEEEc---C--CCHhhHHHHHHHcCCC
Q psy6090 212 LKDARVKVVMIT---G--DNIQTAISVAKECGII 240 (674)
Q Consensus 212 L~~agIrvvmiT---G--Dn~~TA~~vA~~~gi~ 240 (674)
..++|+.++-+- . +|...++..++++|..
T Consensus 106 a~~~Gidi~RIfd~lndv~nl~~ai~~vk~ag~~ 139 (499)
T PRK12330 106 SAENGMDVFRVFDALNDPRNLEHAMKAVKKVGKH 139 (499)
T ss_pred HHHcCCCEEEEEecCChHHHHHHHHHHHHHhCCe
Confidence 999999875543 2 5788899999999984
No 228
>PF12017 Tnp_P_element: Transposase protein; InterPro: IPR021896 Protein in this family are transposases found in insects. This region is about 230 amino acids in length and is found associated with PF05485 from PFAM.
Probab=25.75 E-value=1.1e+02 Score=31.22 Aligned_cols=36 Identities=31% Similarity=0.426 Sum_probs=33.6
Q ss_pred HHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCCCC
Q psy6090 206 EGVIKELKDARVKVVMITGDNIQTAISVAKECGIID 241 (674)
Q Consensus 206 ~~~I~~L~~agIrvvmiTGDn~~TA~~vA~~~gi~~ 241 (674)
.+.|++|+++|+.|+=++-|...+-+..-+++|+..
T Consensus 199 ~~iI~~l~~~g~~VvAivsD~g~~N~~~w~~Lgi~~ 234 (236)
T PF12017_consen 199 KNIIEKLHEIGYNVVAIVSDMGSNNISLWRELGISE 234 (236)
T ss_pred HHHHHHHHHCCCEEEEEECCCCcchHHHHHHcCCCC
Confidence 678999999999999999999999999999999954
No 229
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=24.49 E-value=2.2e+02 Score=27.06 Aligned_cols=85 Identities=12% Similarity=0.206 Sum_probs=53.2
Q ss_pred cchHHHHHHHHHhhcCcEEEEEeeecccccchHHHhhhchhhhcccceeeeeehhccCCCcchHHHHHHHHhcCCeE--E
Q psy6090 143 VPENIVSVLSEYTEQGYRVIALASRTLSIDDYKHLNYMKREDIEKDLEFLGLIILENRLKPQTEGVIKELKDARVKV--V 220 (674)
Q Consensus 143 ~p~~~~~~l~~~~~~G~Rvla~A~k~l~~~~~~~~~~~~r~~iE~dL~flGli~~en~lk~~t~~~I~~L~~agIrv--v 220 (674)
+.+...+.++.+..+|+++..+.-+.-. . ....+. + .-++.++ ....||...-...-+++.|++. +
T Consensus 44 ~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~--~--~~~~~~-~--~~gl~~~-----~~~~KP~p~~~~~~l~~~~~~~~~~ 111 (170)
T TIGR01668 44 AYPALRDWIEELKAAGRKLLIVSNNAGE--Q--RAKAVE-K--ALGIPVL-----PHAVKPPGCAFRRAHPEMGLTSEQV 111 (170)
T ss_pred cChhHHHHHHHHHHcCCEEEEEeCCchH--H--HHHHHH-H--HcCCEEE-----cCCCCCChHHHHHHHHHcCCCHHHE
Confidence 4567788999999999998877765311 0 011110 0 1222221 2335666555555566667642 5
Q ss_pred EEcCCCHhhHHHHHHHcCC
Q psy6090 221 MITGDNIQTAISVAKECGI 239 (674)
Q Consensus 221 miTGDn~~TA~~vA~~~gi 239 (674)
+.=||+..+=+.-|+.+|+
T Consensus 112 l~IGDs~~~Di~aA~~aGi 130 (170)
T TIGR01668 112 AVVGDRLFTDVMGGNRNGS 130 (170)
T ss_pred EEECCcchHHHHHHHHcCC
Confidence 6669999888999999999
No 230
>cd05014 SIS_Kpsf KpsF-like protein. KpsF is an arabinose-5-phosphate isomerase which contains SIS (Sugar ISomerase) domains. SIS domains are found in many phosphosugar isomerases and phosphosugar binding proteins. KpsF catalyzes the reversible reaction of ribulose 5-phosphate to arabinose 5-phosphate. This is the second step in the CMP-Kdo biosynthesis pathway.
Probab=24.12 E-value=70 Score=28.46 Aligned_cols=32 Identities=19% Similarity=0.234 Sum_probs=26.1
Q ss_pred cCCCcchHHHHHHHHhcCCeEEEEcCCCHhhH
Q psy6090 199 NRLKPQTEGVIKELKDARVKVVMITGDNIQTA 230 (674)
Q Consensus 199 n~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA 230 (674)
..--+++.++++.+|+.|++++.+|+.+....
T Consensus 57 sG~t~~~~~~~~~a~~~g~~vi~iT~~~~s~l 88 (128)
T cd05014 57 SGETDELLNLLPHLKRRGAPIIAITGNPNSTL 88 (128)
T ss_pred CCCCHHHHHHHHHHHHCCCeEEEEeCCCCCch
Confidence 33567889999999999999999999765533
No 231
>PF10686 DUF2493: Protein of unknown function (DUF2493); InterPro: IPR019627 This entry is represented by Mycobacteriophage D29, Gp61. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. Members of this family are mainly Proteobacteria. The function is not known.
Probab=23.94 E-value=1.7e+02 Score=23.76 Aligned_cols=53 Identities=19% Similarity=0.309 Sum_probs=35.3
Q ss_pred cCcEEEEEeeecccccchHHHhhhchhhhcccceeeeeehhccCCCcchHHHHHHHHhcCCeEEEEcCCCHhhHHH----
Q psy6090 157 QGYRVIALASRTLSIDDYKHLNYMKREDIEKDLEFLGLIILENRLKPQTEGVIKELKDARVKVVMITGDNIQTAIS---- 232 (674)
Q Consensus 157 ~G~Rvla~A~k~l~~~~~~~~~~~~r~~iE~dL~flGli~~en~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~---- 232 (674)
+|.||+..+-|...+.+ -+..++.++++..=..++++|..+..|-.
T Consensus 2 ~g~rVli~GgR~~~D~~------------------------------~i~~~Ld~~~~~~~~~~lvhGga~~GaD~iA~~ 51 (71)
T PF10686_consen 2 EGMRVLITGGRDWTDHE------------------------------LIWAALDKVHARHPDMVLVHGGAPKGADRIAAR 51 (71)
T ss_pred CCCEEEEEECCccccHH------------------------------HHHHHHHHHHHhCCCEEEEECCCCCCHHHHHHH
Confidence 68999999999876211 14566666666555577888888665544
Q ss_pred HHHHcCC
Q psy6090 233 VAKECGI 239 (674)
Q Consensus 233 vA~~~gi 239 (674)
-|++-|+
T Consensus 52 wA~~~gv 58 (71)
T PF10686_consen 52 WARERGV 58 (71)
T ss_pred HHHHCCC
Confidence 4555555
No 232
>cd00860 ThrRS_anticodon ThrRS Threonyl-anticodon binding domain. ThrRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=23.67 E-value=1.1e+02 Score=25.23 Aligned_cols=43 Identities=21% Similarity=0.285 Sum_probs=34.0
Q ss_pred hccCCCcchHHHHHHHHhcCCeEEE-EcCCCHhhHHHHHHHcCC
Q psy6090 197 LENRLKPQTEGVIKELKDARVKVVM-ITGDNIQTAISVAKECGI 239 (674)
Q Consensus 197 ~en~lk~~t~~~I~~L~~agIrvvm-iTGDn~~TA~~vA~~~gi 239 (674)
+.+...+.+.+..+.||++|+++.+ ..+++..-....|...|.
T Consensus 9 ~~~~~~~~a~~~~~~Lr~~g~~v~~d~~~~~~~~~~~~a~~~g~ 52 (91)
T cd00860 9 VTDEHLDYAKEVAKKLSDAGIRVEVDLRNEKLGKKIREAQLQKI 52 (91)
T ss_pred eCchHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHcCC
Confidence 3455677888889999999999988 566667777778888887
No 233
>PF06399 GFRP: GTP cyclohydrolase I feedback regulatory protein (GFRP); InterPro: IPR009112 GTP cyclohydrolase I feedback regulatory protein (GFRP) in mammals helps regulate the biosynthesis of tetrahydrobiopterin through the feedback inhibition of the rate-limiting enzyme GTP cyclohydrolase I (GTPCHI). Tetrahydrobiopterin is the cofactor required for the hydroxylation of aromatic amino acids. The crystal structure of GFRP reveals that the protein forms a homopentamer []. In the presence of phenylalanine, the stimulatory complex consists of a GTPCHI decamer sandwiched by two GFRP pentamers, which is thought to enhance GTPCHI activity by locking the enzyme in the active state []. The structure of GFRP consists of two alpha/beta layers arranged beta(2)-alpha-beta(2)-alpha-beta(2), with antiparallel beta-sheets in the order 342165.; GO: 0009890 negative regulation of biosynthetic process; PDB: 1IS7_N 1IS8_Q 1WPL_T 1JG5_C.
Probab=23.60 E-value=90 Score=25.96 Aligned_cols=20 Identities=25% Similarity=0.552 Sum_probs=17.6
Q ss_pred HHHHHHHhhcCcEEEEEeee
Q psy6090 148 VSVLSEYTEQGYRVIALASR 167 (674)
Q Consensus 148 ~~~l~~~~~~G~Rvla~A~k 167 (674)
..+|+++...|+||++++.-
T Consensus 53 r~VLnKLE~~G~kVvsmtgv 72 (83)
T PF06399_consen 53 RVVLNKLEKMGYKVVSMTGV 72 (83)
T ss_dssp HHHHHHHHHTTEEEEEEEEE
T ss_pred HHHHHHHHhcCeEEEEEecc
Confidence 47899999999999999864
No 234
>TIGR02329 propionate_PrpR propionate catabolism operon regulatory protein PrpR. At least five distinct pathways exists for the catabolism of propionate by way of propionyl-CoA. Members of this family represent the transcriptional regulatory protein PrpR, whose gene is found in most cases divergently transcribed from an operon for the methylcitric acid cycle of propionate catabolism. 2-methylcitric acid, a catabolite by this pathway, is a coactivator of PrpR.
Probab=23.26 E-value=2e+02 Score=33.05 Aligned_cols=82 Identities=9% Similarity=0.174 Sum_probs=53.6
Q ss_pred hHHHHHHHHHhhcCcEEEEEeeecccccchHHHhhhchhhhcccceeeeeehhccCCCcchHHHHHHHHhcCCeEEEEcC
Q psy6090 145 ENIVSVLSEYTEQGYRVIALASRTLSIDDYKHLNYMKREDIEKDLEFLGLIILENRLKPQTEGVIKELKDARVKVVMITG 224 (674)
Q Consensus 145 ~~~~~~l~~~~~~G~Rvla~A~k~l~~~~~~~~~~~~r~~iE~dL~flGli~~en~lk~~t~~~I~~L~~agIrvvmiTG 224 (674)
-|+...+..--..+-|+-.++|..+.. ....+.+ -+.-++.. +.-.=..++.++|++|++.|+++|+ |
T Consensus 84 ~Dil~al~~a~~~~~~ia~vg~~~~~~-~~~~~~~----ll~~~i~~-----~~~~~~~e~~~~~~~l~~~G~~~vi--G 151 (526)
T TIGR02329 84 FDVMQALARARRIASSIGVVTHQDTPP-ALRRFQA----AFNLDIVQ-----RSYVTEEDARSCVNDLRARGIGAVV--G 151 (526)
T ss_pred hhHHHHHHHHHhcCCcEEEEecCcccH-HHHHHHH----HhCCceEE-----EEecCHHHHHHHHHHHHHCCCCEEE--C
Confidence 345555655556677888899987762 2222222 12222222 1222357899999999999999988 7
Q ss_pred CCHhhHHHHHHHcCCC
Q psy6090 225 DNIQTAISVAKECGII 240 (674)
Q Consensus 225 Dn~~TA~~vA~~~gi~ 240 (674)
|. ++...|++.||-
T Consensus 152 ~~--~~~~~A~~~gl~ 165 (526)
T TIGR02329 152 AG--LITDLAEQAGLH 165 (526)
T ss_pred Ch--HHHHHHHHcCCc
Confidence 76 667999999993
No 235
>cd01019 ZnuA Zinc binding protein ZnuA. These proteins have been shown to function as initial receptors in the ABC uptake of Zn2+. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a single helix and bind their specific ligands in the cleft between these domains. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=23.19 E-value=1.6e+02 Score=30.64 Aligned_cols=53 Identities=19% Similarity=0.289 Sum_probs=42.1
Q ss_pred ccceeeeeehhccCCCcch---HHHHHHHHhcCCeEEEE-cCCCHhhHHHHHHHcCC
Q psy6090 187 KDLEFLGLIILENRLKPQT---EGVIKELKDARVKVVMI-TGDNIQTAISVAKECGI 239 (674)
Q Consensus 187 ~dL~flGli~~en~lk~~t---~~~I~~L~~agIrvvmi-TGDn~~TA~~vA~~~gi 239 (674)
-+|..++++.....-.|.. .++++.+++.+++++.. ++-+..++..++++.|+
T Consensus 196 ~gl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~If~e~~~~~~~~~~ia~~~g~ 252 (286)
T cd01019 196 YGLTQAGVFTIDPEIDPGAKRLAKIRKEIKEKGATCVFAEPQFHPKIAETLAEGTGA 252 (286)
T ss_pred cCCceeeeecCCCCCCCCHHHHHHHHHHHHHcCCcEEEecCCCChHHHHHHHHhcCc
Confidence 4677888887765544444 47888999999999887 66788899999999997
No 236
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=22.96 E-value=28 Score=35.87 Aligned_cols=10 Identities=0% Similarity=-0.087 Sum_probs=0.0
Q ss_pred HHHHHHHhhc
Q psy6090 492 IISFIIVHKF 501 (674)
Q Consensus 492 ~~~~~~~~~~ 501 (674)
+..++-+..|
T Consensus 94 v~~L~tLtGQ 103 (381)
T PF05297_consen 94 VSMLWTLTGQ 103 (381)
T ss_dssp ----------
T ss_pred HHHHHHhhcc
Confidence 3333333334
No 237
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=22.93 E-value=49 Score=26.70 Aligned_cols=26 Identities=31% Similarity=0.288 Sum_probs=21.9
Q ss_pred CCEEEEeCCC-ccchhhhhhCCcceee
Q psy6090 344 GYYVAMCGDG-ANDCGALRAAHAGISL 369 (674)
Q Consensus 344 g~~V~m~GDG-~ND~~aLk~AdvGIam 369 (674)
...++|+||. ..|+.+=+++++--.+
T Consensus 21 ~~~~~~VGD~~~~Di~~a~~~G~~~il 47 (75)
T PF13242_consen 21 PSRCVMVGDSLETDIEAAKAAGIDTIL 47 (75)
T ss_dssp GGGEEEEESSTTTHHHHHHHTTSEEEE
T ss_pred HHHEEEEcCCcHhHHHHHHHcCCcEEE
Confidence 3579999999 9999999999875544
No 238
>cd05008 SIS_GlmS_GlmD_1 SIS (Sugar ISomerase) domain repeat 1 found in Glucosamine 6-phosphate synthase (GlmS) and Glucosamine-6-phosphate deaminase (GlmD). The SIS domain is found in many phosphosugar isomerases and phosphosugar binding proteins. GlmS contains a N-terminal glutaminase domain and two C-terminal SIS domains and catalyzes the first step in hexosamine metabolism, converting fructose 6-phosphate into glucosamine 6-phosphate using glutamine as nitrogen source. The glutaminase domain hydrolyzes glutamine to glutamate and ammonia. Ammonia is transferred through a channel to the isomerase domain for glucosamine 6-phosphate synthesis. The end product of the pathway is N-acetylglucosamine, which plays multiple roles in eukaryotic cells including being a building block of bacterial and fungal cell walls. In the absence of glutamine, GlmS catalyzes the isomerization of fructose 6-phosphate into glucose 6- phosphate (PGI-like activity). Glucosamine-6-phosphate deaminase (GlmD) cont
Probab=22.22 E-value=82 Score=27.93 Aligned_cols=28 Identities=21% Similarity=0.101 Sum_probs=23.9
Q ss_pred CCcchHHHHHHHHhcCCeEEEEcCCCHh
Q psy6090 201 LKPQTEGVIKELKDARVKVVMITGDNIQ 228 (674)
Q Consensus 201 lk~~t~~~I~~L~~agIrvvmiTGDn~~ 228 (674)
--+++.++++.+|+.|.+++.+|+....
T Consensus 58 ~t~e~~~~~~~a~~~g~~vi~iT~~~~s 85 (126)
T cd05008 58 ETADTLAALRLAKEKGAKTVAITNVVGS 85 (126)
T ss_pred CCHHHHHHHHHHHHcCCeEEEEECCCCC
Confidence 4567899999999999999999997543
No 239
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=22.13 E-value=3.5e+02 Score=24.81 Aligned_cols=96 Identities=17% Similarity=0.252 Sum_probs=53.6
Q ss_pred chHHHHHHHHHhhcCcEEEEEeeeccc------ccchHHHhhhchhhhc-ccc----eeeeeehhcc---CCCcchHHHH
Q psy6090 144 PENIVSVLSEYTEQGYRVIALASRTLS------IDDYKHLNYMKREDIE-KDL----EFLGLIILEN---RLKPQTEGVI 209 (674)
Q Consensus 144 p~~~~~~l~~~~~~G~Rvla~A~k~l~------~~~~~~~~~~~r~~iE-~dL----~flGli~~en---~lk~~t~~~I 209 (674)
-+...+.++.+.++|+++..+.-+.-. ...+......-+..++ .++ .|.+...-.+ .-||+..-..
T Consensus 29 ~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~KP~~~~~~ 108 (147)
T TIGR01656 29 RPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDGVLFCPHHPADNCSCRKPKPGLIL 108 (147)
T ss_pred cCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeEEEECCCCCCCCCCCCCCCHHHHH
Confidence 345678999999999999988865421 0000000000011111 122 2333221111 2366665555
Q ss_pred HHHHhcCCeE--EEEcCCCHhhHHHHHHHcCCC
Q psy6090 210 KELKDARVKV--VMITGDNIQTAISVAKECGII 240 (674)
Q Consensus 210 ~~L~~agIrv--vmiTGDn~~TA~~vA~~~gi~ 240 (674)
.-+++.|+.. ++.=||+ ..-+..|+.+||-
T Consensus 109 ~~~~~~~~~~~e~i~IGDs-~~Di~~A~~~Gi~ 140 (147)
T TIGR01656 109 EALKRLGVDASRSLVVGDR-LRDLQAARNAGLA 140 (147)
T ss_pred HHHHHcCCChHHEEEEcCC-HHHHHHHHHCCCC
Confidence 5566667654 6667998 7788999999993
No 240
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=22.07 E-value=61 Score=32.78 Aligned_cols=23 Identities=17% Similarity=0.086 Sum_probs=19.4
Q ss_pred CEEEEeCCC-ccchhhhhhCCcce
Q psy6090 345 YYVAMCGDG-ANDCGALRAAHAGI 367 (674)
Q Consensus 345 ~~V~m~GDG-~ND~~aLk~AdvGI 367 (674)
..++|+||. .+|..+=+.|++-.
T Consensus 214 ~~~~~vGD~~~~Di~~a~~~G~~~ 237 (242)
T TIGR01459 214 NRMLMVGDSFYTDILGANRLGIDT 237 (242)
T ss_pred ccEEEECCCcHHHHHHHHHCCCeE
Confidence 479999999 69999988888754
No 241
>PF02009 Rifin_STEVOR: Rifin/stevor family; InterPro: IPR002858 Malaria is still a major cause of mortality in many areas of the world. Plasmodium falciparum causes the most severe human form of the disease and is responsible for most fatalities. Severe cases of malaria can occur when the parasite invades and then proliferates within red blood cell erythrocytes. The parasite produces many variant antigenic proteins, encoded by multigene families, which are present on the surface of the infected erythrocyte and play important roles in virulence. A crucial survival mechanism for the malaria parasite is its ability to evade the immune response by switching these variant surface antigens. The high virulence of P. falciparum relative to other malarial parasites is in large part due to the fact that in this organism many of these surface antigens mediate the binding of infected erythrocytes to the vascular endothelium (cytoadherence) and non-infected erythrocytes (rosetting). This can lead to the accumulation of infected cells in the vasculature of a variety of organs, blocking the blood flow and reducing the oxygen supply. Clinical symptoms of severe infection can include fever, progressive anaemia, multi-organ dysfunction and coma. For more information see []. Several multicopy gene families have been described in Plasmodium falciparum, including the stevor family of subtelomeric open reading frames and the rif interspersed repetitive elements. Both families contain three predicted transmembrane segments. It has been proposed that stevor and rif are members of a larger superfamily that code for variant surface antigens [].
Probab=21.93 E-value=95 Score=32.79 Aligned_cols=18 Identities=28% Similarity=0.283 Sum_probs=12.1
Q ss_pred hhccCCcccchHHHHHHH
Q psy6090 622 KRWSNDYKCCKYIGIENE 639 (674)
Q Consensus 622 ~~~~~~~~~~~y~~~~~~ 639 (674)
||..|.++|-+|.++..|
T Consensus 282 RRKKKmkKKlQYiKLL~e 299 (299)
T PF02009_consen 282 RRKKKMKKKLQYIKLLKE 299 (299)
T ss_pred HHHhhhhHHHHHHHHhcC
Confidence 444456678889888653
No 242
>PRK10747 putative protoheme IX biogenesis protein; Provisional
Probab=21.83 E-value=1.6e+02 Score=32.25 Aligned_cols=7 Identities=14% Similarity=0.610 Sum_probs=3.1
Q ss_pred HHhhhcc
Q psy6090 619 IKFKRWS 625 (674)
Q Consensus 619 ~~~~~~~ 625 (674)
..+|+|+
T Consensus 70 ~~~~~~~ 76 (398)
T PRK10747 70 ARTRGWF 76 (398)
T ss_pred hhhhHHH
Confidence 3444553
No 243
>cd04906 ACT_ThrD-I_1 First of two tandem C-terminal ACT domains of threonine dehydratase I (ThrD-I; L-threonine hydrolyase). This CD includes the first of two tandem C-terminal ACT domains of threonine dehydratase I (ThrD-I; L-threonine hydrolyase) which catalyzes the committed step in branched chain amino acid biosynthesis in plants and microorganisms, the pyridoxal 5'-phosphate (PLP)-dependent dehydration/deamination of L-threonine (or L-serine) to 2-ketobutyrate (or pyruvate). ThrD-I is a cooperative, feedback-regulated (isoleucine and valine) allosteric enzyme that forms a tetramer and contains four pyridoxal phosphate moieties. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=21.79 E-value=72 Score=26.61 Aligned_cols=66 Identities=12% Similarity=0.114 Sum_probs=45.5
Q ss_pred ccchHHHHHHHHHhhcCcEEEEEeeecccccchHHHhhhchhhhcccceeeeeehhccCC-CcchHHHHHHHHhcCCeEE
Q psy6090 142 SVPENIVSVLSEYTEQGYRVIALASRTLSIDDYKHLNYMKREDIEKDLEFLGLIILENRL-KPQTEGVIKELKDARVKVV 220 (674)
Q Consensus 142 ~~p~~~~~~l~~~~~~G~Rvla~A~k~l~~~~~~~~~~~~r~~iE~dL~flGli~~en~l-k~~t~~~I~~L~~agIrvv 220 (674)
..|-.+.+.++.++ |--+.-+.|+.... + +. -..+++|-+= ++...++++.|+++|+++.
T Consensus 10 D~PG~L~~ll~~l~--~anI~~~~y~~~~~-----------~--~~----~v~i~ie~~~~~~~~~~i~~~L~~~G~~~~ 70 (85)
T cd04906 10 ERPGSFKKFCELIG--PRNITEFNYRYADE-----------K--DA----HIFVGVSVANGAEELAELLEDLKSAGYEVV 70 (85)
T ss_pred CCCcHHHHHHHHhC--CCceeEEEEEccCC-----------C--ee----EEEEEEEeCCcHHHHHHHHHHHHHCCCCeE
Confidence 44777888888888 55566666665441 0 00 1345567665 7789999999999999998
Q ss_pred EEcCCC
Q psy6090 221 MITGDN 226 (674)
Q Consensus 221 miTGDn 226 (674)
..|.+.
T Consensus 71 ~~~~~~ 76 (85)
T cd04906 71 DLSDDE 76 (85)
T ss_pred ECCCCH
Confidence 766543
No 244
>COG0279 GmhA Phosphoheptose isomerase [Carbohydrate transport and metabolism]
Probab=21.68 E-value=2.1e+02 Score=27.53 Aligned_cols=57 Identities=12% Similarity=0.168 Sum_probs=44.6
Q ss_pred HHHHHHHHHhhcCcEEEEEeeecccccchHHHhhhchhhhcccceeeeeehhccCCCcchHHHHHHHHhcCCeEEEEcCC
Q psy6090 146 NIVSVLSEYTEQGYRVIALASRTLSIDDYKHLNYMKREDIEKDLEFLGLIILENRLKPQTEGVIKELKDARVKVVMITGD 225 (674)
Q Consensus 146 ~~~~~l~~~~~~G~Rvla~A~k~l~~~~~~~~~~~~r~~iE~dL~flGli~~en~lk~~t~~~I~~L~~agIrvvmiTGD 225 (674)
=|.++++.+++.|=-.+|++-.-- -+.+.++++..++.|+.|+-+||+
T Consensus 98 vFsRqveA~g~~GDvLigISTSGN--------------------------------S~nVl~Ai~~Ak~~gm~vI~ltG~ 145 (176)
T COG0279 98 VFSRQVEALGQPGDVLIGISTSGN--------------------------------SKNVLKAIEAAKEKGMTVIALTGK 145 (176)
T ss_pred HHHHHHHhcCCCCCEEEEEeCCCC--------------------------------CHHHHHHHHHHHHcCCEEEEEecC
Confidence 378899999999999998875321 245678999999999999999999
Q ss_pred CHhhHHHHH
Q psy6090 226 NIQTAISVA 234 (674)
Q Consensus 226 n~~TA~~vA 234 (674)
+----..++
T Consensus 146 ~GG~~~~~~ 154 (176)
T COG0279 146 DGGKLAGLL 154 (176)
T ss_pred CCccccccc
Confidence 865444433
No 245
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=21.64 E-value=97 Score=31.15 Aligned_cols=63 Identities=22% Similarity=0.226 Sum_probs=32.5
Q ss_pred ccEEEecCHHHHHHHHHHHHHc-C------CEEEEeCCCccchhhhhhC------CcceeecCCc-cc--cccCccccc
Q psy6090 322 GAIFARMSSDQKQQLVLELQQL-G------YYVAMCGDGANDCGALRAA------HAGISLSEAE-SS--VASPFTSTV 384 (674)
Q Consensus 322 ~~VfaR~sP~qK~~iV~~lq~~-g------~~V~m~GDG~ND~~aLk~A------dvGIams~ae-as--vAAdf~s~~ 384 (674)
..|=.|..-..|...|+.+.+. + ..++++||...|-.|++.. ++||.++..+ .+ -+|.|-..+
T Consensus 155 ~~vEvrp~~~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~~~~~~i~V~~~~~~~~~t~A~y~l~~ 233 (235)
T PF02358_consen 155 KVVEVRPPGVNKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELEEGGFGIKVGSVSVGEKPTAASYRLDD 233 (235)
T ss_dssp SEEEEE-TT--HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTTS----EEEEES-----------------
T ss_pred CEEEEEeCCCChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhcccCCCCeEEEeeccccccccccccccc
Confidence 3455565555699999988764 3 3799999999999999874 4456555443 11 245555444
No 246
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=20.92 E-value=3.7e+02 Score=25.78 Aligned_cols=89 Identities=20% Similarity=0.317 Sum_probs=49.9
Q ss_pred hHHHHHHHHHhhcCcEEEEEeeecccccchHHHhhhchhhhcccceeeeeehhc--cCCCcchHHHHHHHHhcCCeE--E
Q psy6090 145 ENIVSVLSEYTEQGYRVIALASRTLSIDDYKHLNYMKREDIEKDLEFLGLIILE--NRLKPQTEGVIKELKDARVKV--V 220 (674)
Q Consensus 145 ~~~~~~l~~~~~~G~Rvla~A~k~l~~~~~~~~~~~~r~~iE~dL~flGli~~e--n~lk~~t~~~I~~L~~agIrv--v 220 (674)
++..+.++.+.++|+++..+.-..-.. .. ..+.+-.+.+ -|-+++.-+ ...||+..-...-+++.|+.. +
T Consensus 95 ~~~~~~L~~L~~~g~~~~i~Sn~~~~~--~~--~~l~~~gl~~--~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~p~~~ 168 (198)
T TIGR01428 95 PDVPAGLRALKERGYRLAILSNGSPAM--LK--SLVKHAGLDD--PFDAVLSADAVRAYKPAPQVYQLALEALGVPPDEV 168 (198)
T ss_pred CCHHHHHHHHHHCCCeEEEEeCCCHHH--HH--HHHHHCCChh--hhheeEehhhcCCCCCCHHHHHHHHHHhCCChhhE
Confidence 466788899999999998876533210 00 0111111111 122222222 124666554455556666643 6
Q ss_pred EEcCCCHhhHHHHHHHcCCC
Q psy6090 221 MITGDNIQTAISVAKECGII 240 (674)
Q Consensus 221 miTGDn~~TA~~vA~~~gi~ 240 (674)
+.-||+. .-+.-|+.+||-
T Consensus 169 ~~vgD~~-~Di~~A~~~G~~ 187 (198)
T TIGR01428 169 LFVASNP-WDLGGAKKFGFK 187 (198)
T ss_pred EEEeCCH-HHHHHHHHCCCc
Confidence 7789998 667779999993
No 247
>PTZ00359 hypothetical protein; Provisional
Probab=20.90 E-value=1e+03 Score=26.23 Aligned_cols=30 Identities=17% Similarity=0.075 Sum_probs=14.8
Q ss_pred HHHHhccCCCCCCCCCCCCC-CCCCccccccc
Q psy6090 636 IENELDSNYMWPKLSKQAPV-LNTSPSAESLC 666 (674)
Q Consensus 636 ~~~~~~~~~~w~~~~~~~~~-~~~~~~~~~~~ 666 (674)
-.+|+..+|.+-|-..| |. +--.+-+||++
T Consensus 401 ~~~~~~~~~~~~~~~~~-p~~~c~lrgpes~g 431 (443)
T PTZ00359 401 NAHELEVEPLYDPGVET-PGSECNLRGPESSG 431 (443)
T ss_pred CCcccccccccCCCCCC-CCCcccccCCcccC
Confidence 34556666666555555 33 22344444443
No 248
>TIGR02082 metH 5-methyltetrahydrofolate--homocysteine methyltransferase. S-methyltransferase (MetE, EC 2.1.1.14, the cobalamin-independent methionine synthase) and betaine-homocysteine methyltransferase.
Probab=20.79 E-value=1.1e+02 Score=38.79 Aligned_cols=78 Identities=14% Similarity=0.235 Sum_probs=58.6
Q ss_pred HHhhcCcEEEEEeeecccccchHHHhhhchhhhcccceeeeeehhccCCCcchHHHHHHHHhcCCeEEEEcCCCHhhHHH
Q psy6090 153 EYTEQGYRVIALASRTLSIDDYKHLNYMKREDIEKDLEFLGLIILENRLKPQTEGVIKELKDARVKVVMITGDNIQTAIS 232 (674)
Q Consensus 153 ~~~~~G~Rvla~A~k~l~~~~~~~~~~~~r~~iE~dL~flGli~~en~lk~~t~~~I~~L~~agIrvvmiTGDn~~TA~~ 232 (674)
-+...||+|+=++...-. ++ +-+.-.|.+-.++|+-++-.+--++.++++++|+++|.++.++=|-...|-..
T Consensus 755 ~L~~~GfeVIdLG~dVp~-e~------iv~aa~e~~~diVgLS~Lmt~t~~~m~~vi~~L~~~g~~v~v~vGGa~~s~~~ 827 (1178)
T TIGR02082 755 VLSCNGYEVVDLGVMVPI-EK------ILEAAKDHNADVIGLSGLITPSLDEMKEVAEEMNRRGITIPLLIGGAATSKTH 827 (1178)
T ss_pred HHHhCCCEEEECCCCCCH-HH------HHHHHHHhCCCEEEEcCcccccHHHHHHHHHHHHhcCCCceEEEeccccchhH
Confidence 566788888888854322 11 22234467889999999999999999999999999999987777777776666
Q ss_pred HHHHc
Q psy6090 233 VAKEC 237 (674)
Q Consensus 233 vA~~~ 237 (674)
.+..+
T Consensus 828 ~~~~i 832 (1178)
T TIGR02082 828 TAVKI 832 (1178)
T ss_pred HHhhh
Confidence 55444
No 249
>PRK14042 pyruvate carboxylase subunit B; Provisional
Probab=20.27 E-value=3.6e+02 Score=31.48 Aligned_cols=97 Identities=18% Similarity=0.250 Sum_probs=75.7
Q ss_pred chHHHHHHHHHhhcCcEEE--------EEeeecccccchHHHhhhchhhhcccceeee----eehhccCCCcchHHHHHH
Q psy6090 144 PENIVSVLSEYTEQGYRVI--------ALASRTLSIDDYKHLNYMKREDIEKDLEFLG----LIILENRLKPQTEGVIKE 211 (674)
Q Consensus 144 p~~~~~~l~~~~~~G~Rvl--------a~A~k~l~~~~~~~~~~~~r~~iE~dL~flG----li~~en~lk~~t~~~I~~ 211 (674)
.+++......+.+-|+..+ ..++|.+.+.+|+....+.+.--...|..|- ++++.+-...=+...++.
T Consensus 25 t~d~~~ia~~~d~~g~~siE~~gGatfd~~~rfl~edpwerl~~~r~~~pnt~lqmL~Rg~N~vGy~~~~d~vv~~~v~~ 104 (596)
T PRK14042 25 TEDMLPICNKMDDVGFWAMEVWGGATFDACLRFLKEDPWSRLRQLRQALPNTQLSMLLRGQNLLGYRNYADDVVRAFVKL 104 (596)
T ss_pred HHHHHHHHHHHHhcCCCEEEeeCCcccceeecccCCCHHHHHHHHHHhCCCCceEEEeccccccccccCChHHHHHHHHH
Confidence 5678888888888888764 4588889888888776665554456677777 888888888888999999
Q ss_pred HHhcCCeEEEE-c----CCCHhhHHHHHHHcCCC
Q psy6090 212 LKDARVKVVMI-T----GDNIQTAISVAKECGII 240 (674)
Q Consensus 212 L~~agIrvvmi-T----GDn~~TA~~vA~~~gi~ 240 (674)
..+.||.++=+ + -||...++..++++|..
T Consensus 105 a~~~Gidv~Rifd~lnd~~n~~~~i~~~k~~G~~ 138 (596)
T PRK14042 105 AVNNGVDVFRVFDALNDARNLKVAIDAIKSHKKH 138 (596)
T ss_pred HHHcCCCEEEEcccCcchHHHHHHHHHHHHcCCE
Confidence 99999987433 2 35677888999999985
No 250
>COG1060 ThiH Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes [Coenzyme metabolism / General function prediction only]
Probab=20.15 E-value=1.6e+02 Score=32.12 Aligned_cols=86 Identities=19% Similarity=0.214 Sum_probs=59.8
Q ss_pred chHHHHHHHHHhhcCcEEEEEeeecccccchHHHhh---hchhhhc----ccceeeeeehhccCCCcchHHHHHHHHhcC
Q psy6090 144 PENIVSVLSEYTEQGYRVIALASRTLSIDDYKHLNY---MKREDIE----KDLEFLGLIILENRLKPQTEGVIKELKDAR 216 (674)
Q Consensus 144 p~~~~~~l~~~~~~G~Rvla~A~k~l~~~~~~~~~~---~~r~~iE----~dL~flGli~~en~lk~~t~~~I~~L~~ag 216 (674)
|+++.+.++...+.|.+=+.+-.-.-++..+.-+.. .-++... .-++-..+.-+.+.-++...+++++|++||
T Consensus 92 ~eeI~~~~~~~~~~G~~Evli~gG~~p~~~~~y~~~~~~~ik~~~p~~~i~a~s~~ei~~~~~~~~~s~~E~l~~Lk~aG 171 (370)
T COG1060 92 PEEILEEVREAVKRGITEVLIVGGEHPELSLEYYEELFRTIKEEFPDLHIHALSAGEILFLAREGGLSYEEVLKRLKEAG 171 (370)
T ss_pred HHHHHHHHHHHHHcCCeEEEEecCcCCCcchHHHHHHHHHHHHhCcchhhcccCHHHhHHHHhccCCCHHHHHHHHHHcC
Confidence 888999999999999998888776666433221111 1122111 223333344556778999999999999999
Q ss_pred CeEEEEcCCCHhh
Q psy6090 217 VKVVMITGDNIQT 229 (674)
Q Consensus 217 IrvvmiTGDn~~T 229 (674)
...++.+|--.+.
T Consensus 172 ldsmpg~~aeil~ 184 (370)
T COG1060 172 LDSMPGGGAEILS 184 (370)
T ss_pred CCcCcCcceeech
Confidence 9999998876654
No 251
>cd03174 DRE_TIM_metallolyase DRE-TIM metallolyase superfamily. The DRE-TIM metallolyase superfamily includes 2-isopropylmalate synthase (IPMS), alpha-isopropylmalate synthase (LeuA), 3-hydroxy-3-methylglutaryl-CoA lyase, homocitrate synthase, citramalate synthase, 4-hydroxy-2-oxovalerate aldolase, re-citrate synthase, transcarboxylase 5S, pyruvate carboxylase, AksA, and FrbC. These members all share a conserved triose-phosphate isomerase (TIM) barrel domain consisting of a core beta(8)-alpha(8) motif with the eight parallel beta strands forming an enclosed barrel surrounded by eight alpha helices. The domain has a catalytic center containing a divalent cation-binding site formed by a cluster of invariant residues that cap the core of the barrel. In addition, the catalytic site includes three invariant residues - an aspartate (D), an arginine (R), and a glutamate (E) - which is the basis for the domain name "DRE-TIM".
Probab=20.05 E-value=8.6e+02 Score=24.43 Aligned_cols=27 Identities=19% Similarity=0.272 Sum_probs=21.3
Q ss_pred chHHHHHHHHHhhcCcEEEEEeeeccc
Q psy6090 144 PENIVSVLSEYTEQGYRVIALASRTLS 170 (674)
Q Consensus 144 p~~~~~~l~~~~~~G~Rvla~A~k~l~ 170 (674)
.++..+.++.+.+-|...|-+++-.-.
T Consensus 18 ~e~~~~i~~~L~~~GV~~IEvg~~~~~ 44 (265)
T cd03174 18 TEDKLEIAEALDEAGVDSIEVGSGASP 44 (265)
T ss_pred HHHHHHHHHHHHHcCCCEEEeccCcCc
Confidence 456677888999999999999886544
No 252
>TIGR03551 F420_cofH 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofH subunit. This enzyme, together with CofG, complete the biosynthesis of 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, the chromophore of coenzyme F420. The chromophore is also used in cyanobacteria DNA photolyases.
Probab=20.00 E-value=3.2e+02 Score=29.31 Aligned_cols=98 Identities=18% Similarity=0.112 Sum_probs=58.4
Q ss_pred chHHHHHHHHHhhcCcEEEEEeeecccccchHHHhhhchhhhc--ccceeeeeehhc-----cCCCcchHHHHHHHHhcC
Q psy6090 144 PENIVSVLSEYTEQGYRVIALASRTLSIDDYKHLNYMKREDIE--KDLEFLGLIILE-----NRLKPQTEGVIKELKDAR 216 (674)
Q Consensus 144 p~~~~~~l~~~~~~G~Rvla~A~k~l~~~~~~~~~~~~r~~iE--~dL~flGli~~e-----n~lk~~t~~~I~~L~~ag 216 (674)
++++.+.++.....|.+-+.+.-...+..+.+...++-+.--+ .++.+.++...| ....--+.+.+++|++||
T Consensus 72 ~eeI~e~~~~~~~~G~~~i~l~gG~~p~~~~~~~~~i~~~Ik~~~~~i~~~~~t~~ei~~~~~~~g~~~~e~l~~LkeAG 151 (343)
T TIGR03551 72 LEEIAERAAEAWKAGATEVCIQGGIHPDLDGDFYLDILRAVKEEVPGMHIHAFSPMEVYYGARNSGLSVEEALKRLKEAG 151 (343)
T ss_pred HHHHHHHHHHHHHCCCCEEEEEeCCCCCCCHHHHHHHHHHHHHHCCCceEEecCHHHHHHHHHHcCCCHHHHHHHHHHhC
Confidence 6778888888888999988888543332222222222221111 134444433222 123334689999999999
Q ss_pred CeEEEEcCC-------------------CHhhHHHHHHHcCCCC
Q psy6090 217 VKVVMITGD-------------------NIQTAISVAKECGIID 241 (674)
Q Consensus 217 IrvvmiTGD-------------------n~~TA~~vA~~~gi~~ 241 (674)
+..+..||. ....++..|++.||-.
T Consensus 152 l~~i~~~~~E~~~~~v~~~i~~~~~~~~~~~~~i~~a~~~Gi~v 195 (343)
T TIGR03551 152 LDSMPGTAAEILDDEVRKVICPDKLSTAEWIEIIKTAHKLGIPT 195 (343)
T ss_pred cccccCcchhhcCHHHHHhcCCCCCCHHHHHHHHHHHHHcCCcc
Confidence 987665541 1245677899999954
Done!