BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6091
(437 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6INH1|RN157_XENLA RING finger protein 157 OS=Xenopus laevis GN=rnf157 PE=2 SV=1
Length = 674
Score = 296 bits (758), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 151/310 (48%), Positives = 204/310 (65%), Gaps = 31/310 (10%)
Query: 7 FPYPPPQSNEPYKTLKALINIRKESLRFVKVNDE--------SQRQV-YNIEFIFDCDVP 57
FPY P EP KTL++LINIRK++LR V+ +E S+ +V YN+EF FD D
Sbjct: 70 FPYTAPSPQEPVKTLRSLINIRKDTLRLVRCTEELKTTGVEGSRPKVHYNVEFTFDTDAR 129
Query: 58 CSITVHFFVTEDIMGNTISYIPKKSNPCPVVKTFHYKKGASQLFCQPGVTFIPSQYEDDE 117
+IT+++ TE+ G SY+PK SN T H+K+G SQ FC P T PS++ ++E
Sbjct: 130 VAITMYYQATEEFQGGIPSYLPKSSNL--QSDTVHFKRGVSQQFCFPSHTVDPSEWREEE 187
Query: 118 LMYNIDKEIIPIAIQCVTTSDDGQEDQKQCHTTIAVVDHHADDSYTLKGLKQKLYVDGLC 177
L +++D+E+ P+ + V ++G+E H +A + HAD S+ +K LKQK VDG+
Sbjct: 188 LTFDLDREVYPMVVHAVV--EEGEEHLGHSHVLMATFEKHADGSFCVKPLKQKQVVDGVS 245
Query: 178 YLLQEIYGIENKNNEQ-YKGCED-CEDGGSECVICMCDIRDTLILPCRHLCLCHSCADSL 235
YLLQEIYGIENK N Q K ED D +ECV+C+ D+RDTLILPCRHLCLC++CAD+L
Sbjct: 246 YLLQEIYGIENKYNSQDSKVAEDELSDNSAECVVCLSDVRDTLILPCRHLCLCNACADTL 305
Query: 236 RYQANNCPICRAPFRALLQIRALQK----------------NSSHVSETSSDNIPPGYDA 279
RYQA+NCPICR PFRALLQIRA++K +S E +S+++PPGY+
Sbjct: 306 RYQASNCPICRLPFRALLQIRAMRKVPGPHSPGGFSPIIAAPTSDSEEHTSEHVPPGYEV 365
Query: 280 VSLIEALNGP 289
VSL+EALNGP
Sbjct: 366 VSLLEALNGP 375
>sp|Q96PX1|RN157_HUMAN RING finger protein 157 OS=Homo sapiens GN=RNF157 PE=1 SV=3
Length = 679
Score = 292 bits (748), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 152/312 (48%), Positives = 203/312 (65%), Gaps = 32/312 (10%)
Query: 6 LFPYPPPQSNEPYKTLKALINIRKESLRFVKVNDE--------SQRQV-YNIEFIFDCDV 56
+FPY P EP KTL++L+NIRK++LR VK +E S+ +V YN+EF FD D
Sbjct: 69 VFPYAAPPPQEPVKTLRSLVNIRKDTLRLVKCAEEVKSPGEEASKAKVHYNVEFTFDTDA 128
Query: 57 PCSITVHFFVTEDIMGNTISYIPKKSNPCPVVKTFHYKKGASQLFCQPGVTFIPSQYEDD 116
+IT+++ TE+ SYIPK ++ +T YK+G Q FC P T PS++ ++
Sbjct: 129 RVAITIYYQATEEFQNGIASYIPKDNSL--QSETVQYKRGVCQQFCLPSHTVDPSEWAEE 186
Query: 117 ELMYNIDKEIIPIAIQCVTTSDDGQEDQKQCHTTIAVVDHHADDSYTLKGLKQKLYVDGL 176
EL +++D+E+ P+ + V D+G E CH + + H D ++ +K LKQK VDG+
Sbjct: 187 ELGFDLDREVYPLVVHAVV--DEGDEYFGHCHVLLGTFEKHTDGTFCVKPLKQKQVVDGV 244
Query: 177 CYLLQEIYGIENKNNEQ-YKGCED-CEDGGSECVICMCDIRDTLILPCRHLCLCHSCADS 234
YLLQEIYGIENK N Q K ED D +ECV+C+ D+RDTLILPCRHLCLC++CAD+
Sbjct: 245 SYLLQEIYGIENKYNTQDSKVAEDEVSDNSAECVVCLSDVRDTLILPCRHLCLCNTCADT 304
Query: 235 LRYQANNCPICRAPFRALLQIRALQKN-------------SSHVSET----SSDNIPPGY 277
LRYQANNCPICR PFRALLQIRA++K SS S++ SS+NIPPGY
Sbjct: 305 LRYQANNCPICRLPFRALLQIRAMRKKLGPLSPTSFNPIISSQTSDSEEHPSSENIPPGY 364
Query: 278 DAVSLIEALNGP 289
+ VSL+EALNGP
Sbjct: 365 EVVSLLEALNGP 376
>sp|Q3TEL6|RN157_MOUSE RING finger protein 157 OS=Mus musculus GN=Rnf157 PE=2 SV=2
Length = 685
Score = 291 bits (746), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 154/331 (46%), Positives = 205/331 (61%), Gaps = 35/331 (10%)
Query: 2 QPMALFPYPPPQSNEPYKTLKALINIRKESLRFVKVNDESQRQV---------YNIEFIF 52
+P+A FPY P EP KTL++LINIRK++LR VK +E + YN+EF F
Sbjct: 66 RPVA-FPYAAPPPQEPVKTLRSLINIRKDTLRLVKCAEEVKSHGEEAGKAKVHYNVEFTF 124
Query: 53 DCDVPCSITVHFFVTEDIMGNTISYIPKKSNPCPVVKTFHYKKGASQLFCQPGVTFIPSQ 112
D D +IT+++ TE+ SYIPK ++ +T HYK+G Q FC P T PS+
Sbjct: 125 DTDARVAITIYYQATEEFQNGIASYIPKDNSL--QSETVHYKRGVFQQFCLPSHTVDPSE 182
Query: 113 YEDDELMYNIDKEIIPIAIQCVTTSDDGQEDQKQCHTTIAVVDHHADDSYTLKGLKQKLY 172
+ ++EL +++D+E+ P+ + V D+G E CH + + H D ++ +K LKQK
Sbjct: 183 WAEEELGFDLDREVYPLVVHAVV--DEGDEYFGHCHVLLGTFEKHPDGTFCVKPLKQKQV 240
Query: 173 VDGLCYLLQEIYGIENKNNEQYKGC--EDCEDGGSECVICMCDIRDTLILPCRHLCLCHS 230
VDG+ YLLQEIYGIENK N Q +D D +ECV+C+ D+RDTLILPCRHLCLC++
Sbjct: 241 VDGVSYLLQEIYGIENKYNTQDSKVAEDDVSDNSAECVVCLSDVRDTLILPCRHLCLCNT 300
Query: 231 CADSLRYQANNCPICRAPFRALLQIRALQKNSSHVSETSSD-----------------NI 273
CAD+LRYQANNCPICR PFRALLQIRA++K +S +S + NI
Sbjct: 301 CADTLRYQANNCPICRLPFRALLQIRAMRKKLGPLSPSSFNPIISSQTSDSEEHSSSENI 360
Query: 274 PPGYDAVSLIEALNGPCAVRH--PPLVVSLD 302
PPGY+ VSL+EALNGP PPL V D
Sbjct: 361 PPGYEVVSLLEALNGPLTSSPAVPPLHVLGD 391
>sp|Q7ZUL9|MGRN1_DANRE Probable E3 ubiquitin-protein ligase MGRN1 OS=Danio rerio GN=mgrn1
PE=2 SV=1
Length = 529
Score = 285 bits (729), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 142/309 (45%), Positives = 198/309 (64%), Gaps = 31/309 (10%)
Query: 7 FPYPPPQSNEPYKTLKALINIRKESLRFVKVNDESQ---------RQVYNIEFIFDCDVP 57
FPY P ++EP KTL++L+NIRK+SLR V+ D+S R +Y++EF FD D
Sbjct: 70 FPYVTPAAHEPVKTLRSLVNIRKDSLRLVRYKDDSDSTPEDTGDPRVLYSVEFCFDTDAR 129
Query: 58 CSITVHFFVTEDIMGNTISYIPKKSNPCPVVKTFHYKKGASQLFCQPGVTFIPSQYEDDE 117
+IT++ E+ Y K +P V +T HYK+G +Q F P ++++ +E
Sbjct: 130 VAITLYCQAFEEFANGMAIYSAK--SPSMVSETVHYKRGINQQFSLPSFKIDFTKWKPEE 187
Query: 118 LMYNIDKEIIPIAIQCVTTSDDGQEDQKQCHTTIAVVDHHADDSYTLKGLKQKLYVDGLC 177
L +++DK + P+ +Q + DDG + H +A + H D S+++K LKQK VD +
Sbjct: 188 LNFDLDKGVFPLVVQAIV--DDGDDVTGHAHVLLAAFERHVDGSFSVKPLKQKQIVDRVS 245
Query: 178 YLLQEIYGIENKNNEQYKGCED-CEDGGSECVICMCDIRDTLILPCRHLCLCHSCADSLR 236
YLLQEIYGIEN+NN++ K ED D SECV+C+ D+RDTLILPCRHLCLC++CAD+LR
Sbjct: 246 YLLQEIYGIENRNNQETKSTEDENSDNSSECVVCLSDLRDTLILPCRHLCLCNACADTLR 305
Query: 237 YQANNCPICRAPFRALLQIRALQK-----------------NSSHVSETSSDNIPPGYDA 279
YQANNCPICR PFRALLQIRA++K +S H +++DNIPPGY+
Sbjct: 306 YQANNCPICRLPFRALLQIRAVRKKTAATLSPVSFSPVLSQSSDHTEHSNADNIPPGYEP 365
Query: 280 VSLIEALNG 288
+SL+EALNG
Sbjct: 366 ISLLEALNG 374
>sp|Q9D074|MGRN1_MOUSE E3 ubiquitin-protein ligase MGRN1 OS=Mus musculus GN=Mgrn1 PE=1
SV=2
Length = 532
Score = 280 bits (717), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 148/312 (47%), Positives = 195/312 (62%), Gaps = 28/312 (8%)
Query: 7 FPYPPPQSNEPYKTLKALINIRKESLRFVKVND---------ESQRQVYNIEFIFDCDVP 57
FPY P +EP KTL++L+NIRK+SLR V+ + E R +Y++EF FD D
Sbjct: 70 FPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKEDADSPTEDGEKPRVLYSLEFTFDADAR 129
Query: 58 CSITVHFFVTEDIMGNTISYIPKKSNPCPVVKTFHYKKGASQLFCQPGVTFIPSQYEDDE 117
+IT++ E+++ Y K NP +T HYK+G SQ F P S+++DDE
Sbjct: 130 VAITIYCQAVEELVNGVAVYSCK--NPSLQSETVHYKRGVSQQFSLPSFKIDFSEWKDDE 187
Query: 118 LMYNIDKEIIPIAIQCVTTSDDGQEDQKQCHTTIAVVDHHADDSYTLKGLKQKLYVDGLC 177
L +++D+ + P+ IQ V D E H +A + H D S+++K LKQK VD +
Sbjct: 188 LNFDLDRGVFPVVIQAVVDEGDVVEVTGHAHVLLAAFEKHVDGSFSVKPLKQKQIVDRVS 247
Query: 178 YLLQEIYGIENKNNEQYKGCED-CEDGGSECVICMCDIRDTLILPCRHLCLCHSCADSLR 236
YLLQEIYGIENKNN++ K +D D SECV+C+ D+RDTLILPCRHLCLC SCAD+LR
Sbjct: 248 YLLQEIYGIENKNNQETKPSDDENSDNSSECVVCLSDLRDTLILPCRHLCLCTSCADTLR 307
Query: 237 YQANNCPICRAPFRALLQIRALQKNSS----------------HVSETSSDNIPPGYDAV 280
YQANNCPICR PFRALLQIRA++K H +SSD+IPPGY+ +
Sbjct: 308 YQANNCPICRLPFRALLQIRAVRKKPGALSPISFSPVLAQSVDHDEHSSSDSIPPGYEPI 367
Query: 281 SLIEALNGPCAV 292
SL+EALNG AV
Sbjct: 368 SLLEALNGLRAV 379
>sp|Q5XIQ4|MGRN1_RAT E3 ubiquitin-protein ligase MGRN1 OS=Rattus norvegicus GN=Mgrn1
PE=2 SV=1
Length = 533
Score = 280 bits (716), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 172/415 (41%), Positives = 232/415 (55%), Gaps = 41/415 (9%)
Query: 7 FPYPPPQSNEPYKTLKALINIRKESLRFVKVND---------ESQRQVYNIEFIFDCDVP 57
FPY P +EP KTL++L+NIRK+SLR V+ D E R +Y++EF FD D
Sbjct: 71 FPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDTDSPTEDGEKPRVLYSLEFTFDADAR 130
Query: 58 CSITVHFFVTEDIMGNTISYIPKKSNPCPVVKTFHYKKGASQLFCQPGVTFIPSQYEDDE 117
+IT++ E+ + Y K NP +T HYK+G SQ F P S+++DDE
Sbjct: 131 VAITIYCQAVEEFVNGMTVYSCK--NPSLQSETVHYKRGVSQQFSLPSFKIDFSEWKDDE 188
Query: 118 LMYNIDKEIIPIAIQCVTTSDDGQEDQKQCHTTIAVVDHHADDSYTLKGLKQKLYVDGLC 177
L +++D+ + P+ IQ V D E H +A + H D S+++K LKQK VD +
Sbjct: 189 LNFDLDRGVFPVVIQAVVDEGDVVEVTGHAHVLLAAFEKHVDGSFSVKPLKQKQIVDRVS 248
Query: 178 YLLQEIYGIENKNNEQYKGCED-CEDGGSECVICMCDIRDTLILPCRHLCLCHSCADSLR 236
YLLQEIYGIENKNN++ K +D D SECV+C+ D+RDTLILPCRHLCLC SCAD+LR
Sbjct: 249 YLLQEIYGIENKNNQETKPSDDENSDNSSECVVCLSDLRDTLILPCRHLCLCTSCADTLR 308
Query: 237 YQANNCPICRAPFRALLQIRALQKNSS----------------HVSETSSDNIPPGYDAV 280
YQANNCPICR PFRALLQIRA++K H ++SD++PPGY+ +
Sbjct: 309 YQANNCPICRLPFRALLQIRAVRKKPGALSPISFSPVLAQSVDHDEHSNSDSVPPGYEPI 368
Query: 281 SLIEALNGPCAVRHPPLVVSLDPLAECATTAALN---RRASAERSGKGSKVSAPSVTSQT 337
SL+EALNG AV P + S PL E T + ++ +AS +G + +T
Sbjct: 369 SLLEALNGLRAVS--PAIPSA-PLYEEITYSGISDGLSQASCPLAGLDRIIENGIQKGKT 425
Query: 338 QEGEEKSVSDANVPETPDDDSEAEKLS-----PLLDAATSTQLDRSNSVTDTDTE 387
Q S P +P + + EKLS PL + L S+S TE
Sbjct: 426 QSKSPDST--LRSPSSPIHEEDEEKLSEDPEAPLPPSGVELVLQESSSPESFGTE 478
>sp|O60291|MGRN1_HUMAN E3 ubiquitin-protein ligase MGRN1 OS=Homo sapiens GN=MGRN1 PE=1
SV=2
Length = 552
Score = 277 bits (708), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 170/420 (40%), Positives = 233/420 (55%), Gaps = 70/420 (16%)
Query: 7 FPYPPPQSNEPYKTLKALINIRKESLRFVKVNDESQ---------RQVYNIEFIFDCDVP 57
FPY P +EP KTL++L+NIRK+SLR V+ D++ R +Y++EF FD D
Sbjct: 70 FPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDADSPTEDGDKPRVLYSLEFTFDADAR 129
Query: 58 CSITVHFFVTEDIMGNTISYIPKKSNPCPVVKTFHYKKGASQLFCQPGVTFIPSQYEDDE 117
+IT++ +E+ + Y PK +P +T HYK+G SQ F P S+++DDE
Sbjct: 130 VAITIYCQASEEFLNGRAVYSPK--SPSLQSETVHYKRGVSQQFSLPSFKIDFSEWKDDE 187
Query: 118 LMYNIDKEIIPIAIQCVTTSDDGQEDQKQCHTTIAVVDHHADDSYTLKGLKQKLYVDGLC 177
L +++D+ + P+ IQ V D E H +A + H D S+++K LKQK VD +
Sbjct: 188 LNFDLDRGVFPVVIQAVVDEGDVVEVTGHAHVLLAAFEKHMDGSFSVKPLKQKQIVDRVS 247
Query: 178 YLLQEIYGIENKNNEQYKGCED-CEDGGSECVICMCDIRDTLILPCRHLCLCHSCADSLR 236
YLLQEIYGIENKNN++ K +D D +ECV+C+ D+RDTLILPCRHLCLC SCAD+LR
Sbjct: 248 YLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLCTSCADTLR 307
Query: 237 YQANNCPICRAPFRALLQIRALQKNSSHVS------------------------------ 266
YQANNCPICR PFRALLQIRA++K +S
Sbjct: 308 YQANNCPICRLPFRALLQIRAVRKKPGALSPVSFSPVLAQSLEHDEHSCPFKKSKPHPAS 367
Query: 267 --------ETSSDNIPPGYDAVSLIEALNGPCAVRHPPLVVSLDPLAECATTAALNRRAS 318
ET+SD++PPGY+ +SL+EALNG AV P + S PL E T + +
Sbjct: 368 LASKKPKRETNSDSVPPGYEPISLLEALNGLRAVS--PAIPSA-PLYEEITYSGI----- 419
Query: 319 AERSGKGSKVSAPS------VTSQTQEGEEKSV---SDANVPETPDDDSEAEKLSPLLDA 369
S S+ S P + S Q+G +S S P +P + + EKLS +DA
Sbjct: 420 ---SDGLSQASCPLAAIDHILDSSRQKGRPQSKAPDSTLRSPSSPIHEEDEEKLSEDVDA 476
>sp|Q84ME1|LUL3_ARATH Probable E3 ubiquitin-protein ligase LUL3 OS=Arabidopsis thaliana
GN=LUL3 PE=1 SV=1
Length = 378
Score = 147 bits (372), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 93/278 (33%), Positives = 142/278 (51%), Gaps = 22/278 (7%)
Query: 1 MQPMALFPYP-----PPQSNEPYKTLKAL---INIRKESLRFVKVNDESQRQVYNIEFIF 52
M+P+ P P PP ++T K + +N+ K ++R V D+ Y + F+F
Sbjct: 109 MRPVYFGPTPVAVMEPPAPYVEHQTAKKVKNDVNVNKATVRLVA--DDLNPGHYLVSFVF 166
Query: 53 DCDVPCSITVHFFVTEDIMGNTISYIPKKSNPCPVVKTFHYKKGASQLFCQ-PGVTFIPS 111
D S T+ FF E+ + ++P+ P V ++KGA Q F Q PG
Sbjct: 167 DALFDGSFTIIFFGEEESKCTIVPHLPEAFPPIKVP----FQKGAGQKFLQAPGTGIDLG 222
Query: 112 QYEDDELMYNIDKEIIPIAIQC---VTTSDDGQEDQKQCHTTIAVVDHHADDSYTLKGLK 168
+ D+L +E+ P+ I ++ S +E T AV++ D S+ +K +K
Sbjct: 223 FFSLDDLSKPSPEEVYPLVISAETVISPSSVSEEPLVHKQITQAVLEKTNDGSFKVKVMK 282
Query: 169 QKLYVDGLCYLLQEIYGIENK--NNEQYKGCEDCEDGGSECVICMCDIRDTLILPCRHLC 226
Q L+++G Y LQE+YGI+N G ED GG ECVIC+ + +DT ++PCRHLC
Sbjct: 283 QILWIEGERYELQELYGIDNSITQGTAASGLEDT--GGKECVICLTEPKDTAVMPCRHLC 340
Query: 227 LCHSCADSLRYQANNCPICRAPFRALLQIRALQKNSSH 264
LC CA+ LR+Q N CPICR P L++I+ + H
Sbjct: 341 LCSDCAEELRFQTNKCPICRQPIHELVKIKVESSDEQH 378
>sp|Q9LFH6|LUL2_ARATH Probable E3 ubiquitin-protein ligase LUL2 OS=Arabidopsis thaliana
GN=LUL2 PE=2 SV=1
Length = 299
Score = 141 bits (355), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 88/243 (36%), Positives = 129/243 (53%), Gaps = 20/243 (8%)
Query: 20 TLKALINIRKESLRFVKVNDESQRQVYNIEFIFDCDVPCSITVHFFVTEDIMGNTISYIP 79
T++ IN++KE+LR DE + + F FD VP SITV FF E G + I
Sbjct: 62 TIRNDINLKKETLRLEP--DEQNPGKFLLSFTFDASVPGSITVMFFAKE---GKDCNLIA 116
Query: 80 KKSNPCPVVKTFHYKKGASQLF---CQPGVTFIPSQYEDDELMYNIDKEIIPIAIQCVTT 136
K + P + + KG Q F C G+ F S + +L+ + ++ +A++
Sbjct: 117 TKEDLFPSTQV-SFAKGLEQRFKQACGTGIDF--SDMSEADLVEANETDVYHVAVKAEVV 173
Query: 137 SDDGQED----QKQCHTTIAVVDHHADDSYTLKGLKQKLYVDGLCYLLQEIYGIENKNNE 192
S+D + +Q + DH + Y + +KQ L+V+G Y+LQEIYGI N ++
Sbjct: 174 SEDDHPESGTPNRQITHVVLEKDHKGE--YKARVVKQILWVNGNRYVLQEIYGIGNTVDD 231
Query: 193 QYKGCEDCEDGGSECVICMCDIRDTLILPCRHLCLCHSCADSLRYQANNCPICRAPFRAL 252
ED + G ECVIC+ + RDT +LPCRH+C+C CA LR+Q N CPICR P L
Sbjct: 232 N---GEDANERGKECVICLSEPRDTTVLPCRHMCMCSGCAKLLRFQTNLCPICRQPVDRL 288
Query: 253 LQI 255
L+I
Sbjct: 289 LEI 291
>sp|Q9LYW5|LUL1_ARATH Probable E3 ubiquitin-protein ligase LUL1 OS=Arabidopsis thaliana
GN=LUL1 PE=1 SV=1
Length = 337
Score = 140 bits (353), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/248 (34%), Positives = 132/248 (53%), Gaps = 17/248 (6%)
Query: 10 PPPQSNEPYKTLKALINIRKESLRFVKVNDESQRQVYNIEFIFDCDVPCSITVHFFVTED 69
PP ++ T++ +N++K++L + + R + + F FD +P ITV FF TED
Sbjct: 101 PPTYVHQKAVTIRNDVNLKKKTLTLIPDPENPNRLL--VSFTFDASMPGRITVVFFATED 158
Query: 70 IMGNTISYIPKKSNPCPVVKTFHYKKGASQLFCQPGVTFIP-SQYEDDELMYNIDKEIIP 128
N + K + P + TF + +G Q F Q T I + ++D EL +D ++ P
Sbjct: 159 AECNLRA---TKEDTLPPI-TFDFGEGLGQKFIQSSGTGIDLTAFKDSELFKEVDTDVFP 214
Query: 129 IAIQC-VTTSDDGQEDQKQCHTTIAVVDHHADDSYTLKGLKQKLYVDGLCYLLQEIYGIE 187
+A++ T +++G+ T VV ++ +KQ L+V+ Y L EIYGIE
Sbjct: 215 LAVKAEATPAEEGKSGSTNVQIT-QVVYTKEKGEIKIEVVKQILWVNKRRYELLEIYGIE 273
Query: 188 NKNNEQYKGCEDCEDGGSECVICMCDIRDTLILPCRHLCLCHSCADSLRYQANNCPICRA 247
N D D G ECV+C+ + RDT +LPCRH+C+C CA +LR+Q N CP+CR
Sbjct: 274 NT--------VDGSDEGKECVVCLSEPRDTTVLPCRHMCMCSGCAKALRFQTNLCPVCRQ 325
Query: 248 PFRALLQI 255
P LL+I
Sbjct: 326 PVEMLLEI 333
>sp|Q8LA32|LUL4_ARATH Probable E3 ubiquitin-protein ligase LUL4 OS=Arabidopsis thaliana
GN=LUL4 PE=2 SV=1
Length = 359
Score = 136 bits (342), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 83/250 (33%), Positives = 134/250 (53%), Gaps = 13/250 (5%)
Query: 19 KTLKALINIRKESLRFVKVNDESQRQVYNIEFIFDCDVPCSITVHFFVTEDIMGNTISYI 78
K ++ +N+ ++++R ++V+D + + F+FD S T+ FF E+ I
Sbjct: 119 KKVRNDVNVHRDTVR-LEVDDLVPGH-HLVSFVFDALFDGSFTITFFAKEEPNCTIIPQF 176
Query: 79 PKKSNPCPVVKTFHYKKGASQLFCQP-GVTFIPSQYEDDELMYNIDKEIIPIAIQCVTT- 136
P+ +P FH++KG Q F QP G S + D+L +++++ P+ I T
Sbjct: 177 PEVYSP----TRFHFQKGPGQKFLQPSGTGTDLSFFVLDDLSKPLEEDVYPLVISAETII 232
Query: 137 SDDGQEDQKQCH--TTIAVVDHHADDSYTLKGLKQKLYVDGLCYLLQEIYGIENKNNEQY 194
S + +Q H T AV++ D S+ +K +KQ L+++G+ Y L+E+YG +
Sbjct: 233 SPNSISEQSSVHKQVTQAVLEKDNDGSFKVKVVKQILWIEGVRYELRELYG---STTQGA 289
Query: 195 KGCEDCEDGGSECVICMCDIRDTLILPCRHLCLCHSCADSLRYQANNCPICRAPFRALLQ 254
D G+ECVICM + +DT +LPCRHLC+C CA LR Q+N CPICR P LL+
Sbjct: 290 ASGLDESGSGTECVICMTEAKDTAVLPCRHLCMCSDCAKELRLQSNKCPICRQPIEELLE 349
Query: 255 IRALQKNSSH 264
I+ + H
Sbjct: 350 IKMNSSDEQH 359
>sp|Q9S752|LOFG2_ARATH Probable E3 ubiquitin-protein ligase LOG2 OS=Arabidopsis thaliana
GN=LOG2 PE=1 SV=1
Length = 388
Score = 135 bits (340), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 95/272 (34%), Positives = 134/272 (49%), Gaps = 27/272 (9%)
Query: 4 MALFPYP--------PPQSNEPYKTLKALINIRKESLRFVKVNDESQRQVYNIEFIFDCD 55
MA +PY P ++ T++ +N++KESLR D R + + F FD
Sbjct: 107 MARYPYAGHMMAQPTPYVEHQKAVTIRNDVNLKKESLRLEPDPDNPGR--FLVSFTFDAT 164
Query: 56 VPCSITVHFFVTEDIMGNTISYIPKKSNPCPVVKTFHYKKGASQLFCQP---GVTFIPSQ 112
V I+V FF E K + P + T ++KG Q F Q G+ F S
Sbjct: 165 VSGRISVIFFAKES---EDCKLTATKEDILPPI-TLDFEKGLGQKFKQSSGSGIDF--SV 218
Query: 113 YEDDELM-YNIDKEIIPIAIQCVTTSDDGQEDQ------KQCHTTIAVVDHHADDSYTLK 165
+ED EL D EI P+A++ G+ ++ K T AV + + ++
Sbjct: 219 FEDVELFKAAADTEIYPLAVKAEAAPSGGENEEEERSGSKNAQITQAVYEKDKGE-IKIR 277
Query: 166 GLKQKLYVDGLCYLLQEIYGIENKNNEQYKGCEDCEDGGSECVICMCDIRDTLILPCRHL 225
+KQ L+V+G Y LQEIYGI N +D D G ECVIC+ + RDT +LPCRH+
Sbjct: 278 VVKQILWVNGTRYELQEIYGIGNTVEGDDDSADDANDPGKECVICLSEPRDTTVLPCRHM 337
Query: 226 CLCHSCADSLRYQANNCPICRAPFRALLQIRA 257
C+C CA LR+Q N CPICR P LL+I+
Sbjct: 338 CMCSGCAKVLRFQTNRCPICRQPVERLLEIKV 369
>sp|Q0MW30|NEU1B_MOUSE E3 ubiquitin-protein ligase NEURL1B OS=Mus musculus GN=Neurl1b PE=1
SV=1
Length = 546
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 205 SECVICMCDIRDTLILPCRHLCLCHSCADSLRYQANN-CPICRAPFRALLQI 255
EC +C DT+I C H+CLCH C LR QA CPICR P + +++I
Sbjct: 492 GECTVCFDSEVDTVIYTCGHMCLCHGCGLRLRRQARACCPICRRPIKDVIKI 543
>sp|A8MQ27|NEU1B_HUMAN E3 ubiquitin-protein ligase NEURL1B OS=Homo sapiens GN=NEURL1B PE=1
SV=1
Length = 555
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 205 SECVICMCDIRDTLILPCRHLCLCHSCADSLRYQANN-CPICRAPFRALLQI 255
EC +C DT+I C H+CLCHSC L+ QA CPICR P + +++I
Sbjct: 501 GECTVCFDGEVDTVIYTCGHMCLCHSCGLRLKRQARACCPICRRPIKDVIKI 552
>sp|Q9BY78|RNF26_HUMAN RING finger protein 26 OS=Homo sapiens GN=RNF26 PE=2 SV=1
Length = 433
Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 42/81 (51%), Gaps = 12/81 (14%)
Query: 183 IYGIENKNNEQYKGCEDC------EDGGSECVICMCDIRDTLILPCRHLCLCHSCADSLR 236
+ G E N E+ G +D ++ +CVIC + L+LPCRHLCLC +C + L
Sbjct: 350 VRGRERLNEEEPPGGQDPWKLLKEQEERKKCVICQDQSKTVLLLPCRHLCLCQACTEILM 409
Query: 237 YQ---ANNCPICRAPFRALLQ 254
NCP+CR R +LQ
Sbjct: 410 RHPVYHRNCPLCR---RGILQ 427
>sp|Q8BUH7|RNF26_MOUSE Ring finger protein 26 OS=Mus musculus GN=Rnf26 PE=2 SV=1
Length = 424
Score = 49.3 bits (116), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 32/52 (61%), Gaps = 6/52 (11%)
Query: 206 ECVICMCDIRDTLILPCRHLCLCHSCADSLRYQ---ANNCPICRAPFRALLQ 254
+CVIC + L+LPCRHLCLC +C + L NCP+CR R++LQ
Sbjct: 370 KCVICQDQSKTVLLLPCRHLCLCQACTEILMRHPVYHRNCPLCR---RSILQ 418
>sp|Q923S6|NEU1A_MOUSE Neuralized-like protein 1A OS=Mus musculus GN=Neurl PE=1 SV=1
Length = 574
Score = 46.2 bits (108), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 206 ECVICMCDIRDTLILPCRHLCLCHSCADSLRYQANN-CPICRAPFRALLQ 254
EC IC DT+I C H+CLC+SC L+ + CPICR P + +++
Sbjct: 520 ECTICYEHAVDTVIYTCGHMCLCYSCGLRLKKALHACCPICRRPIKDIIK 569
>sp|Q8RX22|MIP1_ARATH MND1-interacting protein 1 OS=Arabidopsis thaliana GN=MIP1 PE=1
SV=1
Length = 711
Score = 45.8 bits (107), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 7/56 (12%)
Query: 206 ECVICMCDIRDTLILPCRHLCLCHSCADSLRYQANN------CPICRAPFRALLQI 255
EC+ICM D + LPC H +C SC+DS + +NN CP CR + ++I
Sbjct: 652 ECIICMKDEVSVVFLPCAHQVVCGSCSDSF-FASNNGGSKVTCPCCRGLVQQRIRI 706
>sp|Q6IV56|RN141_DANRE RING finger protein 141 OS=Danio rerio GN=rnf141 PE=2 SV=2
Length = 222
Score = 45.8 bits (107), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 39/91 (42%), Gaps = 14/91 (15%)
Query: 206 ECVICMCDIRDTLILPCRHLCLCHSCADSLRYQANNCPICRAPFRALLQIRALQKNSSHV 265
EC ICM D + LILPC H C C D Q+ NCP+CR +Q +++
Sbjct: 146 ECCICM-DGKADLILPCAH-SFCQKCIDKWSGQSRNCPVCR-----------IQVTAANE 192
Query: 266 SETSSDNIPPGYDAVSLIEALNGPCAVRHPP 296
S SD P G D I L H P
Sbjct: 193 SWVMSD-APTGEDVAGYILNLADEAGHPHRP 222
>sp|Q8CJC5|NEUL3_MOUSE E3 ubiquitin-protein ligase NEURL3 OS=Mus musculus GN=Neurl3 PE=2
SV=1
Length = 254
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 48/105 (45%), Gaps = 12/105 (11%)
Query: 167 LKQKLYVDGL-CYLLQEIYG-------IENKNNEQYKGCEDCEDG----GSECVICMCDI 214
L++ + V G + + ++YG ++ K N + E + G ECVIC +
Sbjct: 145 LRKDVLVQGAPLWAVMDVYGTTKAIELLDPKANAWIRSGEPVPESEVISGEECVICFHNT 204
Query: 215 RDTLILPCRHLCLCHSCADSLRYQANNCPICRAPFRALLQIRALQ 259
+T ++PC H C SCA + CPICR + + +L+
Sbjct: 205 ANTRLMPCGHSHFCGSCAWHIFKDTARCPICRWQIEEVAVVSSLK 249
>sp|O76050|NEU1A_HUMAN Neuralized-like protein 1A OS=Homo sapiens GN=NEURL PE=2 SV=1
Length = 574
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 206 ECVICMCDIRDTLILPCRHLCLCHSCADSLRYQANN-CPICRAPFRALLQ 254
EC IC DT+I C H+CLC++C L+ + CPICR P + +++
Sbjct: 520 ECTICYEHAVDTVIYTCGHMCLCYACGLRLKKALHACCPICRRPIKDIIK 569
>sp|Q0WPJ7|RF298_ARATH Putative E3 ubiquitin-protein ligase RF298 OS=Arabidopsis thaliana
GN=RF298 PE=2 SV=1
Length = 814
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 192 EQYKGCEDCEDGGSECVICMCDIRDTLILPCRHLCLCHSCADSLRYQA-NNCPICRAPFR 250
E +G E ECV+C+ + + LPC H LC C +A +CP CRA +
Sbjct: 745 ENNQGAESKIKRERECVMCLSEEMSVIFLPCAHQVLCSKCNQLHEKEAMEDCPSCRAKIQ 804
Query: 251 ALLQIR 256
+Q R
Sbjct: 805 RRIQAR 810
>sp|P29503|NEUR_DROME Protein neuralized OS=Drosophila melanogaster GN=neur PE=1 SV=2
Length = 754
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Query: 178 YLLQEIYGIENKNNEQYKGC---EDCEDGGSECVICMCDIRDTLILPCRHLCLCHSCA-D 233
Y+ Q I N ++K + D +EC IC + D+++ C H+C+C+ CA +
Sbjct: 669 YIEQPIANSTNNAANKWKDSLSDQQSTDSSAECTICYENPIDSVLYMCGHMCMCYDCAIE 728
Query: 234 SLR-YQANNCPICRAPFRALLQ 254
R CP+CRA R +++
Sbjct: 729 QWRGVGGGQCPLCRAVIRDVIR 750
>sp|Q2XNS1|RN141_CANFA RING finger protein 141 OS=Canis familiaris GN=RNF141 PE=2 SV=1
Length = 231
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Query: 206 ECVICMCDIRDTLILPCRHLCLCHSCADSLRYQANNCPICR 246
EC ICM D R LILPC H C C D + NCPICR
Sbjct: 155 ECCICM-DGRADLILPCAH-SFCQKCIDKWSDRHRNCPICR 193
>sp|Q99MB7|RN141_MOUSE RING finger protein 141 OS=Mus musculus GN=Rnf141 PE=2 SV=2
Length = 230
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Query: 206 ECVICMCDIRDTLILPCRHLCLCHSCADSLRYQANNCPICR 246
EC ICM D R LILPC H C C D + NCPICR
Sbjct: 154 ECCICM-DGRADLILPCAH-SFCQKCIDKWSDRHRNCPICR 192
>sp|Q6IV57|RN141_RAT RING finger protein 141 OS=Rattus norvegicus GN=Rnf141 PE=2 SV=1
Length = 230
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Query: 206 ECVICMCDIRDTLILPCRHLCLCHSCADSLRYQANNCPICR 246
EC ICM D R LILPC H C C D + NCPICR
Sbjct: 154 ECCICM-DGRADLILPCAH-SFCQKCIDKWSDRHRNCPICR 192
>sp|Q5R7K8|RN141_PONAB RING finger protein 141 OS=Pongo abelii GN=RNF141 PE=2 SV=1
Length = 230
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Query: 206 ECVICMCDIRDTLILPCRHLCLCHSCADSLRYQANNCPICR 246
EC ICM D R LILPC H C C D + NCPICR
Sbjct: 154 ECCICM-DGRADLILPCAH-SFCQKCIDKWSDRHRNCPICR 192
>sp|Q8WVD5|RN141_HUMAN RING finger protein 141 OS=Homo sapiens GN=RNF141 PE=1 SV=1
Length = 230
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Query: 206 ECVICMCDIRDTLILPCRHLCLCHSCADSLRYQANNCPICR 246
EC ICM D R LILPC H C C D + NCPICR
Sbjct: 154 ECCICM-DGRADLILPCAH-SFCQKCIDKWSDRHRNCPICR 192
>sp|Q32L15|RN141_BOVIN RING finger protein 141 OS=Bos taurus GN=RNF141 PE=2 SV=1
Length = 230
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Query: 206 ECVICMCDIRDTLILPCRHLCLCHSCADSLRYQANNCPICR 246
EC ICM D R LILPC H C C D + NCPICR
Sbjct: 154 ECCICM-DGRADLILPCAH-SFCQKCIDKWSDRHRNCPICR 192
>sp|Q8JHV9|BIR7A_XENLA Baculoviral IAP repeat-containing protein 7-A OS=Xenopus laevis
GN=birc7-a PE=1 SV=1
Length = 401
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 28/52 (53%), Gaps = 6/52 (11%)
Query: 207 CVICMCDIRDTLILPCRHLCLCHSCADSLRYQANNCPICRAPFRALLQIRAL 258
C +CM L +PC HL +C CA +LR+ CPICRA R +RA
Sbjct: 354 CKVCMDKDVSMLFVPCGHLVVCTECAPNLRH----CPICRAAIRG--SVRAF 399
>sp|A9ULZ2|BIR7B_XENLA Baculoviral IAP repeat-containing protein 7-B OS=Xenopus laevis
GN=birc7-b PE=2 SV=2
Length = 345
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 28/52 (53%), Gaps = 6/52 (11%)
Query: 207 CVICMCDIRDTLILPCRHLCLCHSCADSLRYQANNCPICRAPFRALLQIRAL 258
C +CM L +PC HL +C CA +LR+ CPICRA R +RA
Sbjct: 298 CKVCMDKDVSMLFVPCGHLVVCTECAPNLRH----CPICRAAIRG--SVRAF 343
>sp|Q8BMJ7|CGRF1_MOUSE Cell growth regulator with RING finger domain protein 1 OS=Mus
musculus GN=Cgrrf1 PE=2 SV=1
Length = 332
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 4/46 (8%)
Query: 201 EDGGSECVICMCDIRDTLILPCRHLCLCHSCADSLRYQANNCPICR 246
E+ +CV+C + ++LPCRH CLC SC +RY CP+CR
Sbjct: 268 EESSRDCVVCQNGGVNWVLLPCRHACLCDSC---VRY-FKQCPMCR 309
>sp|Q5M870|NEUL3_RAT E3 ubiquitin-protein ligase NEURL3 OS=Rattus norvegicus GN=Neurl3
PE=2 SV=1
Length = 254
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 24/43 (55%)
Query: 204 GSECVICMCDIRDTLILPCRHLCLCHSCADSLRYQANNCPICR 246
G ECVIC + +T ++PC H C SCA + CP+CR
Sbjct: 194 GEECVICFHNTANTRLMPCGHSQFCGSCAWHIFKDTARCPMCR 236
>sp|Q24746|NEUR_DROVI Protein neuralized OS=Drosophila virilis GN=neur PE=4 SV=1
Length = 747
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 202 DGGSECVICMCDIRDTLILPCRHLCLCHSCA-DSLR-YQANNCPICRAPFRALLQ 254
D +EC IC + D+++ C H+C+C+ CA + R CP+CRA R +++
Sbjct: 689 DSSAECTICYENPIDSVLYMCGHMCMCYDCAIEQWRGVGGGQCPLCRAVIRDVIR 743
>sp|Q7XI08|XB34_ORYSJ Probable E3 ubiquitin-protein ligase XBOS34 OS=Oryza sativa subsp.
japonica GN=XBOS34 PE=2 SV=1
Length = 513
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 28/52 (53%)
Query: 207 CVICMCDIRDTLILPCRHLCLCHSCADSLRYQANNCPICRAPFRALLQIRAL 258
CVIC+ + +PC H+ C SC + + CPICRA ++++ A+
Sbjct: 462 CVICLDAPVEGACIPCGHMAGCMSCLKDIESKKWGCPICRAKINQIIRLYAV 513
>sp|Q6R7I2|IAP1_OSHVF Putative apoptosis inhibitor ORF42 OS=Ostreid herpesvirus 1
(isolate France) GN=ORF42 PE=4 SV=1
Length = 364
Score = 42.4 bits (98), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
Query: 206 ECVICMCDIRDTLILPCRHLCLCHSCADSLRYQANNCPICRAPFRALLQ 254
ECVIC+ DT++ PC H LC+ C+ Q CP+CR +Q
Sbjct: 314 ECVICLGAKADTILKPCLHYSLCYGCST----QVQKCPLCRKKIEKRVQ 358
>sp|P97587|CGRF1_RAT Cell growth regulator with RING finger domain protein 1 OS=Rattus
norvegicus GN=Cgrrf1 PE=2 SV=1
Length = 332
Score = 42.4 bits (98), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 4/46 (8%)
Query: 201 EDGGSECVICMCDIRDTLILPCRHLCLCHSCADSLRYQANNCPICR 246
E+ +CV+C + ++LPCRH CLC SC + CP+CR
Sbjct: 268 EESSKDCVVCQNGGVNWVLLPCRHACLCDSCVCYFK----QCPMCR 309
>sp|A9JTP3|BIRC7_XENTR Baculoviral IAP repeat-containing protein 7 OS=Xenopus tropicalis
GN=birc7 PE=2 SV=1
Length = 365
Score = 42.4 bits (98), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 6/52 (11%)
Query: 207 CVICMCDIRDTLILPCRHLCLCHSCADSLRYQANNCPICRAPFRALLQIRAL 258
C +CM + + +PC HL +C CA +LR+ CPICRA R +RA
Sbjct: 318 CKVCMDNDVSMVFVPCGHLVVCTECAPNLRH----CPICRAAIRG--SVRAF 363
>sp|Q3UF64|RNFT2_MOUSE RING finger and transmembrane domain-containing protein 2 OS=Mus
musculus GN=Rnft2 PE=2 SV=2
Length = 445
Score = 42.0 bits (97), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 198 EDCEDGGSECVICMCDIRDTLILPCRHLCLCHSCADSLRYQANNCPICRA 247
+ C + G+ C IC + RD +IL C+H+ C C + CP+CR+
Sbjct: 376 QQCTEAGAVCAICQAEFRDPMILLCQHV-FCEECLCLWLDRERTCPLCRS 424
>sp|Q24306|IAP1_DROME Apoptosis 1 inhibitor OS=Drosophila melanogaster GN=th PE=1 SV=2
Length = 438
Score = 42.0 bits (97), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
Query: 207 CVICMCDIRDTLILPCRHLCLCHSCADSLRYQANNCPICRAPFRALLQI 255
C IC +T LPC H+ C CA S+ CP+CR PF ++++
Sbjct: 391 CKICYGAEYNTAFLPCGHVVACAKCASSV----TKCPLCRKPFTDVMRV 435
>sp|Q75CC8|HRD1_ASHGO ERAD-associated E3 ubiquitin-protein ligase HRD1 OS=Ashbya gossypii
(strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL
Y-1056) GN=HRD1 PE=3 SV=2
Length = 575
Score = 42.0 bits (97), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 48/116 (41%), Gaps = 25/116 (21%)
Query: 175 GLCYLLQEIYGIENKNNEQYKGCEDC-----EDGGSECVICMCDI----------RDTLI 219
G +LL +Y N + Y+ D +D S C+ICM D+ R +
Sbjct: 285 GESFLL--VYNYWKNNKKLYEKLSDVSEEQLDDTDSMCIICMDDMLPTTETTKMNRRAKM 342
Query: 220 LPCRHLCLCHSCADSLRYQANNCPICRAPFRALLQIRALQKNSSHVSETSSDNIPP 275
LPC H+ L C S ++ CPICR A ++SH + + + PP
Sbjct: 343 LPCGHM-LHFGCLKSWMERSQTCPICRLSVFA-------NDSNSHATTQAREQTPP 390
>sp|P53983|ASI3_YEAST Protein ASI3 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=ASI3 PE=1 SV=2
Length = 676
Score = 42.0 bits (97), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 11/84 (13%)
Query: 156 HHADDSYTLKGLKQKLYVDGLCYLLQEIYGIENKNNEQYKGCEDCEDGGSECVICMCDIR 215
HH + Y K L K + +E K + + C++ E+ C+IC + R
Sbjct: 584 HHTNSRYMYKRLNMK-----------DDDKLEFKFDFAFDSCDEVEEMDLSCLICKVNKR 632
Query: 216 DTLILPCRHLCLCHSCADSLRYQA 239
+ + PCR L LC C SL Y+
Sbjct: 633 NIVTWPCRCLALCDDCRISLGYKG 656
>sp|Q8VCM5|MUL1_MOUSE Mitochondrial ubiquitin ligase activator of NFKB 1 OS=Mus musculus
GN=Mul1 PE=2 SV=2
Length = 352
Score = 41.6 bits (96), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 198 EDCEDGGSECVICMCDIRDTLILPCRHLCLCHSCADSLRYQANNCPICR 246
ED E S CV+C+ + + + L C H+C C C +L + CPICR
Sbjct: 293 EDRESLKSACVVCLSNFKSCVFLECGHVCSCRQCYLALP-EPKRCPICR 340
>sp|O10296|IAP1_NPVOP Apoptosis inhibitor 1 OS=Orgyia pseudotsugata multicapsid
polyhedrosis virus GN=IAP1 PE=4 SV=1
Length = 275
Score = 41.6 bits (96), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 206 ECVICMCDIRDTLILPCRHLCLCHSCADSLRYQANNCPICRAPFRALLQI 255
EC +C+ RD ++LPCRH C+C C +L CP CR ++I
Sbjct: 226 ECKVCLERQRDAVLLPCRHFCVCMQCYFALD---GKCPTCRQDVADFIKI 272
>sp|A1E2V0|BIRC3_CANFA Baculoviral IAP repeat-containing protein 3 OS=Canis familiaris
GN=BIRC3 PE=2 SV=1
Length = 604
Score = 41.2 bits (95), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Query: 207 CVICMCDIRDTLILPCRHLCLCHSCADSLRYQANNCPICRAPFRALLQ 254
C +CM + +PC HL +C CA SLR CPICR R ++
Sbjct: 557 CKVCMDKEVSIVFIPCGHLVVCRDCAPSLR----KCPICRGTVRGTVR 600
>sp|Q5ZM74|RN141_CHICK RING finger protein 141 OS=Gallus gallus GN=RNF141 PE=2 SV=1
Length = 230
Score = 41.2 bits (95), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Query: 206 ECVICMCDIRDTLILPCRHLCLCHSCADSLRYQANNCPICR 246
EC ICM D R LILPC H C C D + +CP+CR
Sbjct: 154 ECCICM-DGRVDLILPCAH-SFCQKCIDKWSDRHRSCPVCR 192
>sp|Q7M3S9|RNGB_DICDI RING finger protein B OS=Dictyostelium discoideum GN=rngB PE=2 SV=2
Length = 943
Score = 40.8 bits (94), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 4/49 (8%)
Query: 207 CVICMCDIRDTLILPCRHLCLCHSCADSLRYQANNCPICRAPFRALLQI 255
CVIC + + ++LPCRH LC C L CPICR+ + I
Sbjct: 897 CVICASNPPNIVLLPCRHSSLCSDCCSKL----TKCPICRSHIENKISI 941
>sp|Q13490|BIRC2_HUMAN Baculoviral IAP repeat-containing protein 2 OS=Homo sapiens
GN=BIRC2 PE=1 SV=2
Length = 618
Score = 40.8 bits (94), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Query: 207 CVICMCDIRDTLILPCRHLCLCHSCADSLRYQANNCPICRAPFRALLQ 254
C +CM + +PC HL +C CA SLR CPICR + ++
Sbjct: 571 CKVCMDKEVSVVFIPCGHLVVCQECAPSLR----KCPICRGIIKGTVR 614
>sp|Q4R7G8|MUL1_MACFA Mitochondrial ubiquitin ligase activator of NFKB 1 OS=Macaca
fascicularis GN=MUL1 PE=2 SV=1
Length = 352
Score = 40.8 bits (94), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 198 EDCEDGGSECVICMCDIRDTLILPCRHLCLCHSCADSLRYQANNCPICR 246
ED E S CV+C+ + + L C H+C C C +L + CPICR
Sbjct: 293 EDRESLKSACVVCLSSFKSCVFLECGHVCSCTECYRALP-EPKKCPICR 340
>sp|Q969V5|MUL1_HUMAN Mitochondrial ubiquitin ligase activator of NFKB 1 OS=Homo sapiens
GN=MUL1 PE=1 SV=1
Length = 352
Score = 40.4 bits (93), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 198 EDCEDGGSECVICMCDIRDTLILPCRHLCLCHSCADSLRYQANNCPICR 246
ED E S CV+C+ + + L C H+C C C +L + CPICR
Sbjct: 293 EDRESLKSACVVCLSSFKSCVFLECGHVCSCTECYRALP-EPKKCPICR 340
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.131 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 168,981,418
Number of Sequences: 539616
Number of extensions: 7182620
Number of successful extensions: 26623
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 94
Number of HSP's successfully gapped in prelim test: 340
Number of HSP's that attempted gapping in prelim test: 25900
Number of HSP's gapped (non-prelim): 930
length of query: 437
length of database: 191,569,459
effective HSP length: 120
effective length of query: 317
effective length of database: 126,815,539
effective search space: 40200525863
effective search space used: 40200525863
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 63 (28.9 bits)