BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6093
(350 letters)
Database: swissprot
455,621 sequences; 169,969,125 total letters
Searching..................................................done
>gi|408360071|sp|Q8VHK9.2|DHX36_MOUSE RecName: Full=Probable ATP-dependent RNA helicase DHX36; AltName:
Full=DEAH box protein 36; AltName: Full=MLE-like protein
1; AltName: Full=RNA helicase associated with AU-rich
element ARE
Length = 1001
Score = 264 bits (675), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 141/322 (43%), Positives = 194/322 (60%), Gaps = 51/322 (15%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
GVRKIV+ATNIAETSITIDD+VYV+D GK K ++FD ++NI+T+ EW+S ANAKQR+GR
Sbjct: 536 GVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGR 595
Query: 89 AGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNTA 148
AGRVQ G CYHLY+ R DY LPEI RT L+E+ ++ + ++
Sbjct: 596 AGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIA---------- 645
Query: 149 FTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKMLL 208
+ +++DPP +V LS+K L + ALD E LTPLG HLA+LP++P IGKM+L
Sbjct: 646 -----YFLSRLMDPPSNEAVVLSIKHLMELSALDKQEELTPLGVHLARLPVEPHIGKMIL 700
Query: 209 MASIFSCVDPVFTVAASLGFKDAFYCPMIGKMLLMASIFSCVDPVFTVAASLGFKDAFYC 268
++F C+DPV T+AASL FKD F P+ GK
Sbjct: 701 FGALFCCLDPVLTIAASLSFKDPFVIPL-GK----------------------------- 730
Query: 269 PMNMEKDVDKQKNILAQGAKSDYVVLINAMQGWEQALEHN--YAHDYCRENFLTNNTLLL 326
EK D ++ LA+ +SD++ ++NA +GWE+A Y DYC E FL++NTL +
Sbjct: 731 ----EKIADARRKELAKETRSDHLTVVNAFEGWEEAKRRGFRYEKDYCWEYFLSSNTLQM 786
Query: 327 LRDMKDQFSRTMHEMNFISSRT 348
L +MK QF+ + F+SSR+
Sbjct: 787 LHNMKGQFAEHLLGAGFVSSRS 808
>gi|313104099|sp|Q9H2U1.2|DHX36_HUMAN RecName: Full=Probable ATP-dependent RNA helicase DHX36; AltName:
Full=DEAH box protein 36; AltName: Full=MLE-like protein
1; AltName: Full=RNA helicase associated with AU-rich
element ARE
Length = 1008
Score = 263 bits (673), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 140/322 (43%), Positives = 194/322 (60%), Gaps = 51/322 (15%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
GVRKIV+ATNIAETSITIDD+VYV+D GK K ++FD ++NI+T+ EW+S ANAKQR+GR
Sbjct: 543 GVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGR 602
Query: 89 AGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNTA 148
AGRVQ G CYHLY+ R DY LPEI RT L+E+ ++ + ++
Sbjct: 603 AGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIA---------- 652
Query: 149 FTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKMLL 208
+ +++DPP +V LS++ L ++ALD E LTPLG HLA+LP++P IGKM+L
Sbjct: 653 -----YFLSRLMDPPSNEAVLLSIRHLMELNALDKQEELTPLGVHLARLPVEPHIGKMIL 707
Query: 209 MASIFSCVDPVFTVAASLGFKDAFYCPMIGKMLLMASIFSCVDPVFTVAASLGFKDAFYC 268
++F C+DPV T+AASL FKD F P+ GK
Sbjct: 708 FGALFCCLDPVLTIAASLSFKDPFVIPL-GK----------------------------- 737
Query: 269 PMNMEKDVDKQKNILAQGAKSDYVVLINAMQGWEQALEHN--YAHDYCRENFLTNNTLLL 326
EK D ++ LA+ +SD++ ++NA +GWE+A Y DYC E FL++NTL +
Sbjct: 738 ----EKIADARRKELAKDTRSDHLTVVNAFEGWEEARRRGFRYEKDYCWEYFLSSNTLQM 793
Query: 327 LRDMKDQFSRTMHEMNFISSRT 348
L +MK QF+ + F+SSR
Sbjct: 794 LHNMKGQFAEHLLGAGFVSSRN 815
>gi|94710282|sp|Q6P5D3.2|DHX57_MOUSE RecName: Full=Putative ATP-dependent RNA helicase DHX57; AltName:
Full=DEAH box protein 57
Length = 1388
Score = 204 bits (520), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 124/336 (36%), Positives = 184/336 (54%), Gaps = 53/336 (15%)
Query: 15 SGLKHLQNKSVF---ELGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIAT 71
S L + ++VF +GV KI+++TNIAETSITIDD+VYV+D GK K +D + +
Sbjct: 890 SSLSSEEQQAVFVKPPMGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDAGKGMES 949
Query: 72 LKPEWISLANAKQRRGRAGRVQEGVCYHLY-SRAREQTFQDYPLPEIQRTRLDEVVRTLE 130
L+ ++S ANA QR+GRAGRV GVC+HL+ S LPEIQR L+++ L
Sbjct: 950 LEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLC--LR 1007
Query: 131 SKKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPL 190
K +M S L + F+ ++++PP S++ S LR + AL DE LTPL
Sbjct: 1008 IKILEMFSTH---NLQSVFS-------RLIEPPHIDSLRASKVRLRDLGALTPDEKLTPL 1057
Query: 191 GYHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMIGKMLLMASIFSCV 250
GYHLA LP+D +IGK++L+ SIF C+DP T+AASL FK F P
Sbjct: 1058 GYHLASLPVDVRIGKLMLLGSIFRCLDPALTIAASLAFKSPFVSPWD------------- 1104
Query: 251 DPVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQGAKSDYVVLINAMQGWEQALEHN-- 308
+K+ QK + A SDY+ L+ A +GW+ + + +
Sbjct: 1105 ----------------------KKEEANQKKLEFAFANSDYLALLCAYKGWQLSTKESAR 1142
Query: 309 YAHDYCRENFLTNNTLLLLRDMKDQFSRTMHEMNFI 344
+++YCR+NFL+ TL + +K QF+ + ++ F+
Sbjct: 1143 ASYNYCRQNFLSGRTLQEMASLKRQFTELLSDIGFV 1178
>gi|94710252|sp|Q6P158.2|DHX57_HUMAN RecName: Full=Putative ATP-dependent RNA helicase DHX57; AltName:
Full=DEAH box protein 57
Length = 1386
Score = 201 bits (511), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 123/335 (36%), Positives = 179/335 (53%), Gaps = 53/335 (15%)
Query: 15 SGLKHLQNKSVF---ELGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIAT 71
S L + ++VF GV KI+++TNIAETSITIDD+VYV+D GK K +D + +
Sbjct: 888 SSLSSEEQQAVFVKPPAGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMES 947
Query: 72 LKPEWISLANAKQRRGRAGRVQEGVCYHLY-SRAREQTFQDYPLPEIQRTRLDEVVRTLE 130
L+ ++S ANA QR+GRAGRV GVC+HL+ S LPEIQR L+++ L
Sbjct: 948 LEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLC--LR 1005
Query: 131 SKKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPL 190
K +M S L + F+ ++++PP S++ S LR + AL DE LTPL
Sbjct: 1006 IKILEMFSAH---NLQSVFS-------RLIEPPHTDSLRASKIRLRDLGALTPDERLTPL 1055
Query: 191 GYHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMIGKMLLMASIFSCV 250
GYHLA LP+D +IGK++L SIF C+DP T+AASL FK F P
Sbjct: 1056 GYHLASLPVDVRIGKLMLFGSIFRCLDPALTIAASLAFKSPFVSPW-------------- 1101
Query: 251 DPVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQGAKSDYVVLINAMQGWEQALEHNY- 309
+K+ QK + A SDY+ L+ A +GW+ + +
Sbjct: 1102 ---------------------DKKEEANQKKLEFAFANSDYLALLQAYKGWQLSTKEGVR 1140
Query: 310 -AHDYCRENFLTNNTLLLLRDMKDQFSRTMHEMNF 343
+++YCR+NFL+ L + +K QF+ + ++ F
Sbjct: 1141 ASYNYCRQNFLSGRVLQEMASLKRQFTELLSDIGF 1175
>gi|239938805|sp|Q9H6S0.2|YTDC2_HUMAN RecName: Full=Probable ATP-dependent RNA helicase YTHDC2
Length = 1430
Score = 192 bits (488), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 110/319 (34%), Positives = 171/319 (53%), Gaps = 45/319 (14%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
GVRKI+L+TNIAETSIT++D+V+V+D GK K +FD + + LK WIS A+A QR+GR
Sbjct: 680 GVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGR 739
Query: 89 AGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNTA 148
AGR + G+C+ L+SR R Q ++ PE+ R L E+ L +K +L
Sbjct: 740 AGRCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQELC--LHTK-----------LLAPV 786
Query: 149 FTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKMLL 208
P + +PP V+ ++++L+ IDA+D E LT LGYHLA LP++P +GKM+L
Sbjct: 787 NCPIADFLMKAPEPPPALIVRNAVQMLKTIDAMDTWEDLTELGYHLADLPVEPHLGKMVL 846
Query: 209 MASIFSCVDPVFTVAASLGFKDAFYCPMIGKMLLMASIFSCVDPVFTVAASLGFKDAFYC 268
A + C+DP+ T+A +L ++D F P T A+ + A C
Sbjct: 847 CAVVLKCLDPILTIACTLAYRDPFVLP-------------------TQASQK--RAAMLC 885
Query: 269 PMNMEKDVDKQKNILAQGAKSDYVVLINAMQGWEQALEHNYAHDYCRENFLTNNTLLLLR 328
+ GA SD++ L+ A Q W++A + +C +NFL+ T+ ++
Sbjct: 886 -----------RKRFTAGAFSDHMALLRAFQAWQKARSDGWERAFCEKNFLSQATMEIII 934
Query: 329 DMKDQFSRTMHEMNFISSR 347
M+ Q + F+ +R
Sbjct: 935 GMRTQLLGQLRASGFVRAR 953
>gi|81911463|sp|Q6PGC1.1|DHX29_MOUSE RecName: Full=ATP-dependent RNA helicase Dhx29; AltName: Full=DEAH
box protein 29
Length = 1365
Score = 190 bits (483), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 119/325 (36%), Positives = 174/325 (53%), Gaps = 54/325 (16%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
GVRKIVLATNIAET ITI D+V+V+D G+TK + + +++L ++S A+A QR+GR
Sbjct: 921 GVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGR 980
Query: 89 AGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNTA 148
AGRV++G C+ LY+R R + F DY +PEI R L+E+ +M
Sbjct: 981 AGRVRDGFCFRLYTRERFEGFLDYSVPEILRVPLEELC--------------LHIMKCDL 1026
Query: 149 FTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDE-HLTPLGYHLAKLPLDPQIGKML 207
+P ++ K LDPP + ++ LLR I A + +E LTPLG HLA LP++ +IGKML
Sbjct: 1027 GSPEDFLSK-ALDPPQLQVISNAMNLLRKIGACEPNEPKLTPLGQHLAALPVNVKIGKML 1085
Query: 208 LMASIFSCVDPVFTVAASLGFKDAFYCPMIGKMLLMASIFSCVDPVFTVAASLGFKDAFY 267
+ +IF C++PV T+AA + K F P +G KD
Sbjct: 1086 IFGAIFGCLEPVATLAAVMTEKSPFITP------------------------IGRKD--- 1118
Query: 268 CPMNMEKDVDKQKNILAQGAKSDYVVLINAMQGWEQALEHNYAH---DYCRENFLTNNTL 324
+ D K+ LA A SD++ + NA GW++A + YC+ NFL +L
Sbjct: 1119 -------EADLAKSSLAV-ADSDHLTIYNAYLGWKKAQQEGGFRSEISYCQRNFLNRTSL 1170
Query: 325 LLLRDMKDQFSRTMHEMNFISSRTW 349
L L D+K + + + F SS +W
Sbjct: 1171 LTLEDVKQELMKLVKAAGFSSSPSW 1195
>gi|239983830|sp|B2RR83.1|YTDC2_MOUSE RecName: Full=Probable ATP-dependent RNA helicase YTHDC2
Length = 1445
Score = 189 bits (481), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 109/319 (34%), Positives = 171/319 (53%), Gaps = 45/319 (14%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
GVRKI+L+TNIAETSIT++D+V+V+D GK K +FD + + LK WIS A+A QR+GR
Sbjct: 695 GVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGR 754
Query: 89 AGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNTA 148
AGR + G+C+ L+SR R Q ++ PE+ R L E+ L +K V N
Sbjct: 755 AGRCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQELC--LHTKLLAPV--------NCT 804
Query: 149 FTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKMLL 208
++ + +PP V+ ++++L+ IDA+D E LT LGYHLA LP++P +GKM+L
Sbjct: 805 IADFLM---KAPEPPPALIVRNAVQMLKTIDAMDAWEDLTELGYHLADLPVEPHLGKMVL 861
Query: 209 MASIFSCVDPVFTVAASLGFKDAFYCPMIGKMLLMASIFSCVDPVFTVAASLGFKDAFYC 268
A + C+DP+ T+A +L ++D F P T A+ + A C
Sbjct: 862 CAVVLKCLDPILTIACTLAYRDPFVLP-------------------TQASQK--RAAMLC 900
Query: 269 PMNMEKDVDKQKNILAQGAKSDYVVLINAMQGWEQALEHNYAHDYCRENFLTNNTLLLLR 328
+ G SD++ L+ A Q W++A + +C +NFL+ T+ ++
Sbjct: 901 -----------RKRFTAGTFSDHMALLRAFQAWQKARSDGWERAFCEKNFLSQATMEIII 949
Query: 329 DMKDQFSRTMHEMNFISSR 347
M+ Q + F+ +R
Sbjct: 950 GMRTQLLGQLRASGFVRAR 968
>gi|110278938|sp|Q7Z478.2|DHX29_HUMAN RecName: Full=ATP-dependent RNA helicase DHX29; AltName: Full=DEAH
box protein 29; AltName: Full=Nucleic acid helicase DDXx
Length = 1369
Score = 188 bits (478), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 119/319 (37%), Positives = 172/319 (53%), Gaps = 54/319 (16%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
GVRKIVLATNIAET ITI D+V+V+D G+TK + + +++L ++S A+A QR+GR
Sbjct: 922 GVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGR 981
Query: 89 AGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNTA 148
AGRV++G C+ +Y+R R + F DY +PEI R L+E+ +M
Sbjct: 982 AGRVRDGFCFRMYTRERFEGFMDYSVPEILRVPLEELC--------------LHIMKCNL 1027
Query: 149 FTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDE-HLTPLGYHLAKLPLDPQIGKML 207
+P ++ K LDPP + ++ LLR I A + +E LTPLG HLA LP++ +IGKML
Sbjct: 1028 GSPEDFLSK-ALDPPQLQVISNAMNLLRKIGACELNEPKLTPLGQHLAALPVNVKIGKML 1086
Query: 208 LMASIFSCVDPVFTVAASLGFKDAFYCPMIGKMLLMASIFSCVDPVFTVAASLGFKDAFY 267
+ +IF C+DPV T+AA + K F P +G KD
Sbjct: 1087 IFGAIFGCLDPVATLAAVMTEKSPFTTP------------------------IGRKD--- 1119
Query: 268 CPMNMEKDVDKQKNILAQGAKSDYVVLINAMQGWEQAL-EHNYAHD--YCRENFLTNNTL 324
+ D K+ LA A SD++ + NA GW++A E Y + YCR NFL +L
Sbjct: 1120 -------EADLAKSALAM-ADSDHLTIYNAYLGWKKARQEGGYRSEITYCRRNFLNRTSL 1171
Query: 325 LLLRDMKDQFSRTMHEMNF 343
L L D+K + + + F
Sbjct: 1172 LTLEDVKQELIKLVKAAGF 1190
>gi|224487876|sp|A3KMI0.1|DHX29_XENLA RecName: Full=ATP-dependent RNA helicase DHX29; AltName: Full=DEAH
box protein 29
Length = 1362
Score = 182 bits (462), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 116/323 (35%), Positives = 167/323 (51%), Gaps = 53/323 (16%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
G RKIVLATNIAET ITI D+V+V+D G+TK + + +++L +IS A+A QR+GR
Sbjct: 917 GTRKIVLATNIAETGITIPDVVFVIDAGRTKENRYHESSQMSSLVETFISKASALQRQGR 976
Query: 89 AGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNTA 148
AGRV+ G C+ LY+R R ++F +Y +PEI R L+E+ +M
Sbjct: 977 AGRVRNGYCFRLYTRERFESFMEYSVPEILRVPLEELC--------------LHIMKCDL 1022
Query: 149 FTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALD-DDEHLTPLGYHLAKLPLDPQIGKML 207
+P ++ K LDPP + ++ LLR I A + LTPLG HLA LP++ +IGKML
Sbjct: 1023 GSPEDFLSK-ALDPPQLQVISNAMSLLRKIGACELSQPKLTPLGQHLAALPVNVKIGKML 1081
Query: 208 LMASIFSCVDPVFTVAASLGFKDAFYCPMIGKMLLMASIFSCVDPVFTVAASLGFKDAFY 267
+ +IF C+D V T+AA++ K F P +G KD
Sbjct: 1082 IFGAIFGCLDAVATLAATMTEKSPFVTP------------------------IGEKDR-- 1115
Query: 268 CPMNMEKDVDKQKNILAQGAKSDYVVLINAMQGWEQALEHNYAHD--YCRENFLTNNTLL 325
D K+ +A A SD+V + A GW+ YA + YCR+NFL LL
Sbjct: 1116 --------ADLAKSSMAV-ANSDHVTIFRAYLGWKAIRPEGYAAEMSYCRKNFLNRKALL 1166
Query: 326 LLRDMKDQFSRTMHEMNFISSRT 348
+ D+K + R + F R+
Sbjct: 1167 TIEDVKQELIRLVRAAGFECPRS 1189
>gi|82233708|sp|Q5ZI74.1|DHX30_CHICK RecName: Full=Putative ATP-dependent RNA helicase DHX30; AltName:
Full=DEAH box protein 30
Length = 1231
Score = 177 bits (448), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 113/325 (34%), Positives = 164/325 (50%), Gaps = 60/325 (18%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
GVRKIVLATNIAETSITI+DIV+VVD G K +D+K ++ L+ W+S +N QRRGR
Sbjct: 766 GVRKIVLATNIAETSITINDIVHVVDSGTHKEERYDLKTKVSCLETVWVSKSNVVQRRGR 825
Query: 89 AGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNTA 148
AGR Q G YHL+ R+R Y +PEI RT L+ +V V + + TA
Sbjct: 826 AGRCQSGFAYHLFPRSRLDKMPTYQVPEILRTPLENLV----------VQAKIHMPEKTA 875
Query: 149 FTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKMLL 208
V + LD PD +V ++ LL+ I LD E LT LG LA++ DP++ K ++
Sbjct: 876 ----VEFLSKALDSPDIKAVDEAVILLQEIGVLDQREALTTLGKRLAQISTDPRLAKAIV 931
Query: 209 MASIFSCVDPVFTVAASLGFKDAFYCPMIGKMLLMASIFSCVDPVFTVAASLGFKDAFYC 268
+ASI+ C+ P+ I SC+ +D F
Sbjct: 932 LASIYRCLHPLLV------------------------IVSCLT-----------RDPFSS 956
Query: 269 PMNMEKDVDKQKNILAQGAKSDYVVLINAMQGWEQALEH-------NYAHDYCRENFLTN 321
+ +VDK K +L++ + SD++ + A+ GWE+ L NY DY +L
Sbjct: 957 SLQNRAEVDKAKAVLSRESGSDHLAFVRAVAGWEEVLRRRDSRARDNYLQDY----YLYG 1012
Query: 322 NTLLLLRDMKDQFSRTMHEMNFISS 346
+L + + QFS ++E +SS
Sbjct: 1013 PSLRFINGLVKQFSENLYEAFLVSS 1037
>gi|110278939|sp|Q2NKY8.1|DHX30_BOVIN RecName: Full=Putative ATP-dependent RNA helicase DHX30; AltName:
Full=DEAH box protein 30
Length = 1220
Score = 176 bits (446), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 112/332 (33%), Positives = 173/332 (52%), Gaps = 55/332 (16%)
Query: 15 SGLKHLQNKSVFE---LGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIAT 71
S + + K++F+ +GVRKIVLATNIAETSITI+DIV+VVD G K +D+K ++
Sbjct: 732 SNIPMMDQKAIFQQPPIGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSC 791
Query: 72 LKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDEVVRTLES 131
L+ W+S AN QRRGRAGR Q G YHL+ R+R + + +PEI RT L+ +V L++
Sbjct: 792 LETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMAPFQVPEILRTPLENLV--LQA 849
Query: 132 KKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLG 191
K M + L+ A +D P+ +V ++ LL+ I LD E+LT LG
Sbjct: 850 -KIHMPEKTAVEFLSKA-----------VDSPNIKAVDEAVILLQEIGVLDQREYLTTLG 897
Query: 192 YHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMIGKMLLMASIFSCVD 251
LA + DP++ K +++A+IF C+ P+ V SC+
Sbjct: 898 QRLAHISTDPRLAKAIVLAAIFRCLHPLLVV------------------------VSCLT 933
Query: 252 PVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQGAKSDYVVLINAMQGWEQAL---EHN 308
+D F + +VDK K +L+ + SD++ + A+ GWE+ L + +
Sbjct: 934 -----------RDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVSGWEEVLRWQDRS 982
Query: 309 YAHDYCRENFLTNNTLLLLRDMKDQFSRTMHE 340
+Y EN L +L + + QFS ++E
Sbjct: 983 SRENYLEENLLYAPSLRFIHGLIKQFSENIYE 1014
>gi|81909465|sp|Q5BJS0.1|DHX30_RAT RecName: Full=Putative ATP-dependent RNA helicase DHX30; AltName:
Full=DEAH box protein 30
Length = 1194
Score = 175 bits (443), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 111/332 (33%), Positives = 171/332 (51%), Gaps = 55/332 (16%)
Query: 15 SGLKHLQNKSVFE---LGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIAT 71
S + + K++F+ LGVRKIVLATNIAETSIT++DIV+VVD G K +D+K ++
Sbjct: 706 SNIPMMDQKAIFQQPPLGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSC 765
Query: 72 LKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDEVVRTLES 131
L+ W+S AN QRRGRAGR Q G YHL+ R+R + + +PEI RT L+ +V L++
Sbjct: 766 LETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLV--LQA 823
Query: 132 KKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLG 191
K M + L+ A +D P+ +V ++ LL+ I LD E+LT LG
Sbjct: 824 -KIHMPEKTAVEFLSKA-----------VDSPNIKAVDEAVILLQEIGVLDQREYLTTLG 871
Query: 192 YHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMIGKMLLMASIFSCVD 251
LA + DP++ K +++A+IF C+ P+ V + L
Sbjct: 872 QRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCL------------------------- 906
Query: 252 PVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQGAKSDYVVLINAMQGWEQAL---EHN 308
+D F + +VDK K +L+ + SD++ + A+ GWE+ L +
Sbjct: 907 ----------TRDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRT 956
Query: 309 YAHDYCRENFLTNNTLLLLRDMKDQFSRTMHE 340
+Y EN L +L + + QFS ++E
Sbjct: 957 SRENYLEENLLYAPSLRFIHGLIKQFSENIYE 988
>gi|81916736|sp|Q99PU8.1|DHX30_MOUSE RecName: Full=Putative ATP-dependent RNA helicase DHX30; AltName:
Full=DEAH box protein 30
Length = 1217
Score = 175 bits (443), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 111/332 (33%), Positives = 171/332 (51%), Gaps = 55/332 (16%)
Query: 15 SGLKHLQNKSVFE---LGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIAT 71
S + + K++F+ LGVRKIVLATNIAETSIT++DIV+VVD G K +D+K ++
Sbjct: 729 SNIPMMDQKAIFQQPPLGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSC 788
Query: 72 LKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDEVVRTLES 131
L+ W+S AN QRRGRAGR Q G YHL+ R+R + + +PEI RT L+ +V L++
Sbjct: 789 LETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLV--LQA 846
Query: 132 KKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLG 191
K M + L+ A +D P+ +V ++ LL+ I LD E+LT LG
Sbjct: 847 -KIHMPEKTAVEFLSKA-----------VDSPNIKAVDEAVILLQEIGVLDQREYLTTLG 894
Query: 192 YHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMIGKMLLMASIFSCVD 251
LA + DP++ K +++A+IF C+ P+ V + L
Sbjct: 895 QRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCL------------------------- 929
Query: 252 PVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQGAKSDYVVLINAMQGWEQAL---EHN 308
+D F + +VDK K +L+ + SD++ + A+ GWE+ L +
Sbjct: 930 ----------TRDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRT 979
Query: 309 YAHDYCRENFLTNNTLLLLRDMKDQFSRTMHE 340
+Y EN L +L + + QFS ++E
Sbjct: 980 SRENYLEENLLYAPSLRFIHGLIKQFSENIYE 1011
>gi|74758997|sp|Q7L2E3.1|DHX30_HUMAN RecName: Full=Putative ATP-dependent RNA helicase DHX30; AltName:
Full=DEAH box protein 30
Length = 1194
Score = 174 bits (442), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 111/332 (33%), Positives = 172/332 (51%), Gaps = 55/332 (16%)
Query: 15 SGLKHLQNKSVFE---LGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIAT 71
S + + K++F+ +GVRKIVLATNIAETSITI+DIV+VVD G K +D+K ++
Sbjct: 706 SNIPMMDQKAIFQQPPVGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSC 765
Query: 72 LKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDEVVRTLES 131
L+ W+S AN QRRGRAGR Q G YHL+ R+R + + +PEI RT L+ +V L++
Sbjct: 766 LETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLV--LQA 823
Query: 132 KKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLG 191
K M + L+ A +D P+ +V ++ LL+ I LD E+LT LG
Sbjct: 824 -KIHMPEKTAVEFLSKA-----------VDSPNIKAVDEAVILLQEIGVLDQREYLTTLG 871
Query: 192 YHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMIGKMLLMASIFSCVD 251
LA + DP++ K +++A+IF C+ P+ V + L
Sbjct: 872 QRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCL------------------------- 906
Query: 252 PVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQGAKSDYVVLINAMQGWEQAL---EHN 308
+D F + +VDK K +L+ + SD++ + A+ GWE+ L + +
Sbjct: 907 ----------TRDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRS 956
Query: 309 YAHDYCRENFLTNNTLLLLRDMKDQFSRTMHE 340
+Y EN L +L + + QFS ++E
Sbjct: 957 SRENYLEENLLYAPSLRFIHGLIKQFSENIYE 988
>gi|75070502|sp|Q5R607.1|DHX30_PONAB RecName: Full=Putative ATP-dependent RNA helicase DHX30; AltName:
Full=DEAH box protein 30
Length = 1194
Score = 171 bits (433), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 110/332 (33%), Positives = 172/332 (51%), Gaps = 55/332 (16%)
Query: 15 SGLKHLQNKSVFE---LGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIAT 71
S + + K++F+ +GVRKIVLATNIAETS TI+DIV+VVD G K +D+K ++
Sbjct: 706 SNIPMMDQKAIFQQPPVGVRKIVLATNIAETSTTINDIVHVVDSGLHKEERYDLKTKVSC 765
Query: 72 LKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDEVVRTLES 131
L+ W+S AN QRRGRAGR Q G YHL+ R+R + + +PEI RT L+ +V L++
Sbjct: 766 LETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLV--LQA 823
Query: 132 KKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLG 191
K M + L+ A +D P+ +V ++ LL+ I LD E+LT LG
Sbjct: 824 -KIHMPEKTAVEFLSKA-----------VDSPNIKAVDEAVILLQEIGVLDQREYLTTLG 871
Query: 192 YHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMIGKMLLMASIFSCVD 251
LA + +P++ K +++A+IF C+ P+ V SC+
Sbjct: 872 QRLAHISTEPRLAKAIVLAAIFRCLHPLLVV------------------------VSCLT 907
Query: 252 PVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQGAKSDYVVLINAMQGWEQAL---EHN 308
+D F + +VDK K +L+ + SD++ + A+ GWE+ L + +
Sbjct: 908 -----------RDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRS 956
Query: 309 YAHDYCRENFLTNNTLLLLRDMKDQFSRTMHE 340
+Y EN L +L + + QFS ++E
Sbjct: 957 SRENYLEENLLYAPSLRFIHGLIKQFSENIYE 988
>gi|311033371|sp|Q14147.2|DHX34_HUMAN RecName: Full=Probable ATP-dependent RNA helicase DHX34; AltName:
Full=DEAH box protein 34
Length = 1143
Score = 167 bits (422), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 98/234 (41%), Positives = 138/234 (58%), Gaps = 20/234 (8%)
Query: 2 AIFFQIWFLQCPSSGLKHLQNKSVFEL---GVRKIVLATNIAETSITIDDIVYVVDCGKT 58
A Q W + S L VF++ GVRK +L+TNIAETS+TID I +VVD GK
Sbjct: 402 ASHTQRWVVLPLHSALSVADQDKVFDVAPPGVRKCILSTNIAETSVTIDGIRFVVDSGKV 461
Query: 59 KMSNFDVKDNIATLKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYPLPEIQ 118
K ++D + + L+ WIS A+A+QR+GRAGR GVC+ LY+ + F YP+PEI+
Sbjct: 462 KEMSYDPQAKLQRLQEFWISQASAEQRKGRAGRTGPGVCFRLYAESDYDAFAPYPVPEIR 521
Query: 119 RTRLDEVVRTLESKKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLI 178
R LD +V ++S V F P++ +PP PAS++ ++ LR
Sbjct: 522 RVALDSLVLQMKS---------MSVGDPRTF-PFI-------EPPPPASLETAILYLRDQ 564
Query: 179 DALDDDEHLTPLGYHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAF 232
ALD E LTP+G LA+LP+D IGKML++ S+FS V+PV T+AA+L + F
Sbjct: 565 GALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFSLVEPVLTIAAALSVQSPF 618
>gi|47116751|sp|Q9DBV3.2|DHX34_MOUSE RecName: Full=Probable ATP-dependent RNA helicase DHX34; AltName:
Full=DEAH box protein 34
Length = 1145
Score = 167 bits (422), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 98/234 (41%), Positives = 137/234 (58%), Gaps = 20/234 (8%)
Query: 2 AIFFQIWFLQCPSSGLKHLQNKSVFEL---GVRKIVLATNIAETSITIDDIVYVVDCGKT 58
A Q W + S L VF++ GVRK +L+TNIAETS+TID I +VVD GK
Sbjct: 404 ASLTQRWVVLPLHSALSVSDQDKVFDVAPAGVRKCILSTNIAETSVTIDGIRFVVDSGKV 463
Query: 59 KMSNFDVKDNIATLKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYPLPEIQ 118
K ++D + + L+ WIS A+A+QR+GRAGR GVCY LY+ + F YP+PEI+
Sbjct: 464 KEMSYDPQAKLQRLQEFWISQASAEQRKGRAGRTGPGVCYRLYAESDYDAFAPYPVPEIR 523
Query: 119 RTRLDEVVRTLESKKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLI 178
R LD +V ++S V F P++ +PP PASV+ ++ L+
Sbjct: 524 RVALDALVLQMKS---------MSVGDPRTF-PFI-------EPPPPASVETAILYLQEQ 566
Query: 179 DALDDDEHLTPLGYHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAF 232
ALD E LTP+G LA+LP+D IGKML++ S+FS +PV T+AA+L + F
Sbjct: 567 GALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFSLAEPVLTIAAALSVQSPF 620
>gi|74582920|sp|O94536.1|UCP12_SCHPO RecName: Full=Putative ATP-dependent RNA helicase ucp12
Length = 1327
Score = 153 bits (387), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 86/210 (40%), Positives = 122/210 (58%), Gaps = 19/210 (9%)
Query: 31 RKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAG 90
RKI+ ATNIAETSITIDD+V V+D G+ K ++DV+ ++ T K W S A +QRRGRAG
Sbjct: 865 RKIICATNIAETSITIDDVVAVIDSGRVKQIDYDVERDLVTFKETWASRAACQQRRGRAG 924
Query: 91 RVQEGVCYHLYSRA-REQTFQDYPLPEIQRTRLDEV-------VRTLESKKFKMVSRRFK 142
RV++G+CY LY+R E+ PE+ RT L +V V+ S + K
Sbjct: 925 RVKKGICYKLYTRGFEEKGMLGQTPPEVLRTALSQVCLNVVPLVKRFSSAGNSVNQGSIK 984
Query: 143 VMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQ 202
+N+ ++DPP+ A+V L+LK L + AL E LT LG +L LP+D +
Sbjct: 985 KFMNS-----------LIDPPNDATVDLALKKLIQVGALTVSEDLTGLGEYLVSLPIDLK 1033
Query: 203 IGKMLLMASIFSCVDPVFTVAASLGFKDAF 232
+GK+L+ SIF ++P T+ A L K F
Sbjct: 1034 LGKLLVFGSIFGYLEPALTITAILSTKSPF 1063
>gi|116241330|sp|Q08211.4|DHX9_HUMAN RecName: Full=ATP-dependent RNA helicase A; Short=RHA; AltName:
Full=DEAH box protein 9; AltName: Full=Leukophysin;
Short=LKP; AltName: Full=Nuclear DNA helicase II;
Short=NDH II
Length = 1270
Score = 152 bits (383), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 83/221 (37%), Positives = 129/221 (58%), Gaps = 18/221 (8%)
Query: 15 SGLKHLQNKSVFE---LGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIAT 71
S + + + VF+ +GV K++L+TNIAETSITI+D+VYV+D K K+ F +N+
Sbjct: 688 SQIPREEQRKVFDPVPVGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTN 747
Query: 72 LKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDEVVRTLES 131
W S N +QR+GRAGRV+ G C+HL SRAR + + + PE+ RT L E+ +++
Sbjct: 748 YATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMTPEMFRTPLHEIALSIKL 807
Query: 132 KKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLG 191
+ + + + ++PP +V + LR +DALD ++ LTPLG
Sbjct: 808 LRLGGIGQFL---------------AKAIEPPPLDAVIEAEHTLRELDALDANDELTPLG 852
Query: 192 YHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAF 232
LAKLP++P+ GKM++M IF D + T+AA+ F + F
Sbjct: 853 RILAKLPIEPRFGKMMIMGCIFYVGDAICTIAAATCFPEPF 893
>gi|71153339|sp|Q5R874.1|DHX9_PONAB RecName: Full=ATP-dependent RNA helicase A; Short=RHA; AltName:
Full=DEAH box protein 9; AltName: Full=Nuclear DNA
helicase II; Short=NDH II
Length = 1269
Score = 152 bits (383), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 83/221 (37%), Positives = 129/221 (58%), Gaps = 18/221 (8%)
Query: 15 SGLKHLQNKSVFE---LGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIAT 71
S + + + VF+ +GV K++L+TNIAETSITI+D+VYV+D K K+ F +N+
Sbjct: 688 SQIPREEQRKVFDPVPVGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTN 747
Query: 72 LKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDEVVRTLES 131
W S N +QR+GRAGRV+ G C+HL SRAR + + + PE+ RT L E+ +++
Sbjct: 748 YATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMTPEMFRTPLHEIALSIKL 807
Query: 132 KKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLG 191
+ + + + ++PP +V + LR +DALD ++ LTPLG
Sbjct: 808 LRLGGIGQFL---------------AKAIEPPPLDAVIEAEHTLRELDALDANDELTPLG 852
Query: 192 YHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAF 232
LAKLP++P+ GKM++M IF D + T+AA+ F + F
Sbjct: 853 RILAKLPIEPRFGKMMIMGCIFYVGDAICTIAAATCFPEPF 893
>gi|2500541|sp|Q28141.1|DHX9_BOVIN RecName: Full=ATP-dependent RNA helicase A; Short=RHA; AltName:
Full=DEAH box protein 9; AltName: Full=Nuclear DNA
helicase II; Short=NDH II
Length = 1287
Score = 150 bits (379), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 80/204 (39%), Positives = 121/204 (59%), Gaps = 15/204 (7%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
GV KI+L+TNIAETSITI+D+VYV+D K K+ F +N+ W S N +QR+GR
Sbjct: 702 GVTKIILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGR 761
Query: 89 AGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNTA 148
AGRV+ G C+HL SRAR + + + PE+ RT L E+ +++ + + +
Sbjct: 762 AGRVRPGFCFHLCSRARFERLETHMTPEMFRTPLHEIALSIKLLRLGGIGQFL------- 814
Query: 149 FTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKMLL 208
+ ++PP +V + LR +DALD ++ LTPLG LAKLP++P+ GKM++
Sbjct: 815 --------AKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILAKLPIEPRFGKMMI 866
Query: 209 MASIFSCVDPVFTVAASLGFKDAF 232
M IF D + T++A+ F + F
Sbjct: 867 MGCIFYVGDAICTISAATCFPEPF 890
>gi|76803804|sp|P24785.2|MLE_DROME RecName: Full=Dosage compensation regulator; AltName:
Full=ATP-dependent RNA helicase mle; AltName:
Full=Protein male-less; AltName: Full=Protein maleless;
AltName: Full=Protein no action potential
Length = 1293
Score = 149 bits (376), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 112/332 (33%), Positives = 165/332 (49%), Gaps = 57/332 (17%)
Query: 6 QIWFLQCPSSGLKHLQNKSVFE---LGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSN 62
Q L C S + Q K VFE GV KI+L+TNIAETSITIDDIV+V+D K +M
Sbjct: 684 QYQILPCHSQIPRDEQRK-VFEPVPEGVTKIILSTNIAETSITIDDIVFVIDICKARMKL 742
Query: 63 FDVKDNIATLKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRL 122
F +N+ + W S N +QR+GRAGRV+ G C+ L SRAR Q +D PE+ RT L
Sbjct: 743 FTSHNNLTSYATVWASKTNLEQRKGRAGRVRPGFCFTLCSRARFQALEDNLTPEMFRTPL 802
Query: 123 DEVVRTLESKKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALD 182
E+ T++ + + L+ A P PP A ++ + LLR + LD
Sbjct: 803 HEMALTIKLLRLGSIHH----FLSKALEP----------PPVDAVIEAEV-LLREMRCLD 847
Query: 183 DDEHLTPLGYHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMIGKMLL 242
++ LTPLG LA+LP++P++GKM+++ ++F C D M +
Sbjct: 848 ANDELTPLGRLLARLPIEPRLGKMMVLGAVFGCAD---------------------LMAI 886
Query: 243 MASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQGAKSDYVVLINAMQGW- 301
MAS S VF++ ++ + + L+ SD+V +I A Q W
Sbjct: 887 MASYSSTFSEVFSLDIG-------------QRRLANHQKALSGTKCSDHVAMIVASQMWR 933
Query: 302 --EQALEHNYAHDYCRENFLTNNTLLLLRDMK 331
+Q EH A +C L +T+ ++ D K
Sbjct: 934 REKQRGEHMEAR-FCDWKGLQMSTMNVIWDAK 964
>gi|71153505|sp|O70133.2|DHX9_MOUSE RecName: Full=ATP-dependent RNA helicase A; Short=RHA; AltName:
Full=DEAH box protein 9; Short=mHEL-5; AltName:
Full=Nuclear DNA helicase II; Short=NDH II
Length = 1380
Score = 149 bits (375), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 81/204 (39%), Positives = 121/204 (59%), Gaps = 15/204 (7%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
GV K++L+TNIAETSITI+D+VYV+D K K+ F +N+ W S N +QR+GR
Sbjct: 707 GVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGR 766
Query: 89 AGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNTA 148
AGRV+ G C+HL SRAR + + PE+ RT L E+ +++ + + +
Sbjct: 767 AGRVRPGFCFHLCSRARFDRLETHMTPEMFRTPLHEIALSIKLLRLGGIGQ--------- 817
Query: 149 FTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKMLL 208
++ K + PP A ++ LR +DALD ++ LTPLG LAKLP++P+ GKM++
Sbjct: 818 -----FLAKAIEPPPLDAIIEAE-HTLRELDALDANDELTPLGRILAKLPIEPRFGKMMI 871
Query: 209 MASIFSCVDPVFTVAASLGFKDAF 232
M IF D V T++A+ F + F
Sbjct: 872 MGCIFYVGDAVCTISAATCFPEPF 895
>gi|74676041|sp|O60114.1|YG65_SCHPO RecName: Full=Uncharacterized helicase C15C4.05
Length = 1428
Score = 149 bits (375), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 88/232 (37%), Positives = 129/232 (55%), Gaps = 22/232 (9%)
Query: 5 FQIWFLQCPSSGLKHLQNKSVFEL---GVRKIVLATNIAETSITIDDIVYVVDCGKTKMS 61
F I+ L S L Q +SVF + G RKIVL+TNIAET +TI D+ V+D G +
Sbjct: 935 FCIYMLH---STLSSAQQQSVFNIPPKGCRKIVLSTNIAETGVTIPDVTCVIDTGVHREM 991
Query: 62 NFDVKDNIATLKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQT-FQDYPLPEIQRT 120
++ + +++ L ++S ANAKQR GRAGRVQEG+CYHL+S+ + T F Y PEI R
Sbjct: 992 RYNSRRHLSRLTDTFVSKANAKQRSGRAGRVQEGICYHLFSKFKHDTQFLSYQTPEILRL 1051
Query: 121 RLDEVVRTLESKKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDA 180
L EVV ++ + V V + LDPP ++ +L+ L + A
Sbjct: 1052 NLQEVVLRVKMCQMGDVQD---------------VLGKALDPPSSTNIIRALEKLHQVGA 1096
Query: 181 LDDDEHLTPLGYHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAF 232
L ++E LT LG L++LP+D +GK+L++ + CVD ++ A L F
Sbjct: 1097 LSENEKLTKLGKFLSQLPVDANLGKILVLGCFYKCVDAASSIVAMLTIGSPF 1148
>gi|71153340|sp|Q68FK8.1|DHX9_XENLA RecName: Full=ATP-dependent RNA helicase A-like protein; AltName:
Full=DEAH box protein 9; AltName: Full=Nuclear DNA
helicase II; Short=NDH II
Length = 1262
Score = 146 bits (369), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 78/204 (38%), Positives = 120/204 (58%), Gaps = 15/204 (7%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
G+ K++L+TNIAETSITI+D+VYV+D K K+ F +N+ W S N +QR+GR
Sbjct: 707 GIIKVILSTNIAETSITINDVVYVIDSCKQKVKLFTSHNNMTNYATVWASKTNLEQRKGR 766
Query: 89 AGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNTA 148
AGRV+ G C+HL S+AR + + PEI RT L EV +++ + +
Sbjct: 767 AGRVRPGFCFHLCSKARFDKLETHLTPEIFRTPLHEVALSIKLLRLGGIGHFL------- 819
Query: 149 FTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKMLL 208
+ ++PP +V + LR +DALD ++ LTPLG LAKLP++P++GKM++
Sbjct: 820 --------SKAIEPPPLDAVIEAEHTLRELDALDSNDELTPLGRILAKLPIEPRLGKMMI 871
Query: 209 MASIFSCVDPVFTVAASLGFKDAF 232
+ IF D + T++A+ F + F
Sbjct: 872 IGCIFYVGDALCTISAATCFPEPF 895
>gi|3915519|sp|O45244.2|DHX16_CAEEL RecName: Full=Probable pre-mRNA-splicing factor ATP-dependent RNA
helicase mog-4; AltName: Full=Masculinization of
germline protein 4; AltName: Full=Sex determination
protein mog-4
Length = 1008
Score = 143 bits (361), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/307 (31%), Positives = 146/307 (47%), Gaps = 57/307 (18%)
Query: 30 VRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRA 89
RK+VLATNIAETS+TID I YV+D G +K ++FD + + L IS A A QR GRA
Sbjct: 633 ARKVVLATNIAETSVTIDGINYVIDPGFSKQNSFDARSGVEHLHVVTISKAAANQRAGRA 692
Query: 90 GRVQEGVCYHLYSR-AREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNTA 148
GR G C+ LY+ A + ++ P+PEIQRT L VV L+S
Sbjct: 693 GRTGPGKCFRLYTAWAYKHELEEQPIPEIQRTNLGNVVLMLKS----------------- 735
Query: 149 FTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKMLL 208
+ V LDPP ++ ++L+ L + AL+ LT LG +A+ P DP + KM++
Sbjct: 736 LGIHDLVHFDFLDPPPQETLVIALEQLYALGALNHRGELTKLGRRMAEFPCDPCMSKMII 795
Query: 209 MASIFSCVDPVFTVAASLGFKDA-FYCPMIGKMLLMASIFSCVDPVFTVAASLGFKDAFY 267
+ + C + + T+AA L A FY P V + + F+
Sbjct: 796 ASEKYECSEEIVTIAAMLSCNAAVFYRPKA-----------------QVIHADSARKGFW 838
Query: 268 CPMNMEKDVDKQKNILAQGAKSDYVVLINAMQGWEQALEHNYAHDYCRENFLTNNTLLLL 327
P D++ L+N W+ E +++ +C EN++ + T+
Sbjct: 839 SPAG------------------DHITLMNVYNKWQ---ESSFSQRWCVENYVQHRTMKRA 877
Query: 328 RDMKDQF 334
RD++DQ
Sbjct: 878 RDVRDQL 884
>gi|74996562|sp|Q54F05.1|DHX8_DICDI RecName: Full=ATP-dependent RNA helicase dhx8; AltName: Full=DEAH box
protein 8
Length = 1160
Score = 142 bits (359), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 102/324 (31%), Positives = 158/324 (48%), Gaps = 64/324 (19%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
G RK+V+ATNIAETS+TID I YV+D G +K F+ K+ + +L IS A A+QR GR
Sbjct: 774 GSRKVVIATNIAETSLTIDGIYYVIDPGFSKQKCFNPKNGMDSLVVAPISQAAARQRSGR 833
Query: 89 AGRVQEGVCYHLYSRAREQTFQD----YPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVM 144
AGR G CY LY+ E F++ +PEIQRT L V T M + +
Sbjct: 834 AGRTGPGKCYRLYT---ESAFKNEMLASSIPEIQRTNLGNTVLT-------MKAMGINDL 883
Query: 145 LNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIG 204
LN F +DPP ++ +++ L + ALD++ LT LG +A+ PLDPQ+
Sbjct: 884 LNFDF----------MDPPPVQTLVSAMEQLYSLGALDEEGLLTRLGRKMAEFPLDPQLS 933
Query: 205 KMLLMASIFSCVDPVFTVAASLGFKDAFYCPMIGKMLLMASIFSCVDPVFTVAASLGFKD 264
KML+ + C D + TV A L ++ FY P + L K
Sbjct: 934 KMLIASVDLGCSDEILTVVAMLSVQNVFYRPKEKQALADQK-----------------KA 976
Query: 265 AFYCPMNMEKDVDKQKNILAQGAKSDYVVLINAMQGWEQALEHNYAHDYCRENFLTNNTL 324
F+ P + D++ L+N + W+ + +++ +C ENF+ +L
Sbjct: 977 KFFQP------------------EGDHLTLLNVYESWKNS---KFSNPWCFENFVQARSL 1015
Query: 325 LLLRDMKDQFSRTM--HEMNFISS 346
+D++ Q M ++++ IS+
Sbjct: 1016 RRAQDVRKQLITIMDRYKLDIISA 1039
>gi|148887367|sp|Q5RAZ4.2|DHX15_PONAB RecName: Full=Putative pre-mRNA-splicing factor ATP-dependent RNA
helicase DHX15; AltName: Full=DEAH box protein 15
Length = 795
Score = 138 bits (348), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 97/314 (30%), Positives = 154/314 (49%), Gaps = 56/314 (17%)
Query: 31 RKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAG 90
RK+V++TNIAETS+TID +V+V+D G K ++ + + +L IS A+A+QR GRAG
Sbjct: 415 RKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAG 474
Query: 91 RVQEGVCYHLYS-RAREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNTAF 149
R + G C+ LY+ +A + QD PEI R+ L VV L+ KK +
Sbjct: 475 RTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVV--LQLKKLGIDD----------- 521
Query: 150 TPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKMLLM 209
V +DPP P ++ +L+LL + AL+DD LT LG +A+ PLDPQ+ KM++
Sbjct: 522 ----LVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIA 577
Query: 210 ASIFSCVDPVFTVAASLGFKDAFYCPMIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCP 269
+ ++C + V ++ A M S+ C F P
Sbjct: 578 SCDYNCSNEVLSITA------------------MLSVPQC----------------FVRP 603
Query: 270 MNMEKDVDKQKNILAQGAKSDYVVLINAMQGWEQALEHNYAHDYCRENFLTNNTLLLLRD 329
+K D+ K A D++ L+N ++Q E + +C +NF+ +L+ +
Sbjct: 604 TEAKKAADEAKMRFAH-IDGDHLTLLNVYHAFKQNHE---SVQWCYDNFINYRSLMSADN 659
Query: 330 MKDQFSRTMHEMNF 343
++ Q SR M N
Sbjct: 660 VRQQLSRIMDRFNL 673
>gi|13124667|sp|O43143.2|DHX15_HUMAN RecName: Full=Putative pre-mRNA-splicing factor ATP-dependent RNA
helicase DHX15; AltName: Full=ATP-dependent RNA helicase
#46; AltName: Full=DEAH box protein 15
Length = 795
Score = 138 bits (348), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 97/314 (30%), Positives = 154/314 (49%), Gaps = 56/314 (17%)
Query: 31 RKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAG 90
RK+V++TNIAETS+TID +V+V+D G K ++ + + +L IS A+A+QR GRAG
Sbjct: 415 RKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAG 474
Query: 91 RVQEGVCYHLYS-RAREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNTAF 149
R + G C+ LY+ +A + QD PEI R+ L VV L+ KK +
Sbjct: 475 RTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVV--LQLKKLGIDD----------- 521
Query: 150 TPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKMLLM 209
V +DPP P ++ +L+LL + AL+DD LT LG +A+ PLDPQ+ KM++
Sbjct: 522 ----LVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIA 577
Query: 210 ASIFSCVDPVFTVAASLGFKDAFYCPMIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCP 269
+ ++C + V ++ A M S+ C F P
Sbjct: 578 SCDYNCSNEVLSITA------------------MLSVPQC----------------FVRP 603
Query: 270 MNMEKDVDKQKNILAQGAKSDYVVLINAMQGWEQALEHNYAHDYCRENFLTNNTLLLLRD 329
+K D+ K A D++ L+N ++Q E + +C +NF+ +L+ +
Sbjct: 604 TEAKKAADEAKMRFAH-IDGDHLTLLNVYHAFKQNHE---SVQWCYDNFINYRSLMSADN 659
Query: 330 MKDQFSRTMHEMNF 343
++ Q SR M N
Sbjct: 660 VRQQLSRIMDRFNL 673
>gi|31563436|sp|O35286.2|DHX15_MOUSE RecName: Full=Putative pre-mRNA-splicing factor ATP-dependent RNA
helicase DHX15; AltName: Full=DEAH box protein 15
Length = 795
Score = 138 bits (348), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 97/314 (30%), Positives = 154/314 (49%), Gaps = 56/314 (17%)
Query: 31 RKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAG 90
RK+V++TNIAETS+TID +V+V+D G K ++ + + +L IS A+A+QR GRAG
Sbjct: 415 RKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAG 474
Query: 91 RVQEGVCYHLYS-RAREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNTAF 149
R + G C+ LY+ +A + QD PEI R+ L VV L+ KK +
Sbjct: 475 RTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVV--LQLKKLGIDD----------- 521
Query: 150 TPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKMLLM 209
V +DPP P ++ +L+LL + AL+DD LT LG +A+ PLDPQ+ KM++
Sbjct: 522 ----LVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIA 577
Query: 210 ASIFSCVDPVFTVAASLGFKDAFYCPMIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCP 269
+ ++C + V ++ A M S+ C F P
Sbjct: 578 SCDYNCSNEVLSITA------------------MLSVPQC----------------FVRP 603
Query: 270 MNMEKDVDKQKNILAQGAKSDYVVLINAMQGWEQALEHNYAHDYCRENFLTNNTLLLLRD 329
+K D+ K A D++ L+N ++Q E + +C +NF+ +L+ +
Sbjct: 604 TEAKKAADEAKMRFAH-IDGDHLTLLNVYHAFKQNHE---SVQWCYDNFINYRSLMSADN 659
Query: 330 MKDQFSRTMHEMNF 343
++ Q SR M N
Sbjct: 660 VRQQLSRIMDRFNL 673
>gi|19862987|sp|Q10752.2|CDC28_SCHPO RecName: Full=Pre-mRNA-splicing factor ATP-dependent RNA
helicase-like protein cdc28; AltName:
Full=Pre-mRNA-processing protein 8
Length = 1055
Score = 138 bits (348), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 98/308 (31%), Positives = 153/308 (49%), Gaps = 55/308 (17%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
G RK+VLATNIAETSITID + +V+D G K + ++ + + +L S A+A QR GR
Sbjct: 685 GARKVVLATNIAETSITIDGVNFVIDSGFVKQNMYNPRTGMESLVSVPCSRASADQRAGR 744
Query: 89 AGRVQEGVCYHLYSRAREQTFQD-YPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNT 147
AGRV G C+ LY+R D PEIQRT L +V L+S +L+
Sbjct: 745 AGRVGPGKCFRLYTRRTYNNELDMVTSPEIQRTNLTNIVLLLKSLGINN-------LLDF 797
Query: 148 AFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKML 207
F +D P P ++ SL+LL + AL++ LT LG +A+ P DP + K L
Sbjct: 798 DF----------MDAPPPETLMRSLELLYALGALNNRGELTKLGRQMAEFPTDPMLSKSL 847
Query: 208 LMASIFSCVDPVFTVAASLGFKDAFYCPMIGKMLLMASIFSCVDPVFTVAASLGFKDAFY 267
+ +S + CV+ V ++ + LG A+SL FY
Sbjct: 848 IASSKYGCVEEVLSIVSMLG----------------------------EASSL-----FY 874
Query: 268 CPMNMEKDVDKQKNILAQGAKSDYVVLINAMQGWEQALEHNYAHDYCRENFLTNNTLLLL 327
P + + DK + Q D++ L++ W + ++ ++++++ RENFL +L
Sbjct: 875 RPKDKIMEADKARANFTQPG-GDHLTLLHI---WNEWVDTDFSYNWARENFLQYKSLCRA 930
Query: 328 RDMKDQFS 335
RD++DQ +
Sbjct: 931 RDVRDQLA 938
>gi|48474990|sp|Q9P774.2|PRP16_SCHPO RecName: Full=Pre-mRNA-splicing factor ATP-dependent RNA helicase
prp16
Length = 1173
Score = 138 bits (348), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 99/313 (31%), Positives = 149/313 (47%), Gaps = 56/313 (17%)
Query: 27 ELGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRR 86
E GVRK+V+ATNIAETS+T+ I YVVD G K+ ++ K I TL+ IS ANA QR
Sbjct: 755 EPGVRKVVVATNIAETSLTVHGISYVVDTGYCKLKMYNSKLGIDTLQVTPISQANANQRA 814
Query: 87 GRAGRVQEGVCYHLYSR-AREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVML 145
GRAGR G+ Y LY+ A + + LPEIQRT L V L+S + +S F M
Sbjct: 815 GRAGRTGPGIAYRLYTEMAYIREMFETTLPEIQRTNLSNTVLILKSLGVEEIS-DFDFM- 872
Query: 146 NTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGK 205
D P ++ SL L + ALD+ LT LG ++ P+DP + K
Sbjct: 873 ---------------DRPPNDTLMASLYELWTLGALDNFGKLTTLGKKMSLFPMDPSLSK 917
Query: 206 MLLMASIFSCVDPVFTVAASLGFKDAFYCPMIGKMLLMASIFSCVDPVFTVAASLGFKDA 265
++++A + C + + T+ + L FY P S ++
Sbjct: 918 LIIIAEDYKCTEEIITIVSMLSVPSVFYRPK-----------------ERAEESDAAREK 960
Query: 266 FYCPMNMEKDVDKQKNILAQGAKSDYVVLINAMQGWEQALEHNYAHDYCRENFLTNNTLL 325
F P +SD+++L+N Q W++ + Y++ +C ++FL + TL
Sbjct: 961 FNVP------------------ESDHLMLLNIYQHWQR---NGYSNSWCSKHFLHSKTLK 999
Query: 326 LLRDMKDQFSRTM 338
RD++ Q M
Sbjct: 1000 RARDIRQQLVEIM 1012
>gi|74996806|sp|Q54MH3.1|DHX16_DICDI RecName: Full=Putative pre-mRNA-splicing factor ATP-dependent RNA
helicase DHX16; AltName: Full=DEAH-box protein 16
Length = 1106
Score = 138 bits (347), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 94/308 (30%), Positives = 149/308 (48%), Gaps = 55/308 (17%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
RK+VLATNIAETS+TID I+YV+D G K F+ + + +L +S A+A QR+GR
Sbjct: 733 NARKVVLATNIAETSLTIDGIIYVIDPGFCKQKMFNPRTGMESLVITPVSRASANQRKGR 792
Query: 89 AGRVQEGVCYHLYSR-AREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNT 147
AGRV G C+ L++ A + ++ +PEIQRT L VV L+S ++N
Sbjct: 793 AGRVAPGKCFRLFTAWAFDNELEENTIPEIQRTNLGNVVLLLKSMGIND-------LMNF 845
Query: 148 AFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKML 207
F +DPP ++ +L+ L + AL+D LT LG +A+ P+DPQ+ KM+
Sbjct: 846 DF----------MDPPPAQTLIAALEQLYALGALNDRGQLTKLGRKMAEFPVDPQLSKMI 895
Query: 208 LMASIFSCVDPVFTVAASLGFKDAFYCPMIGKMLLMASIFSCVDPVFTVAASLGFKDAFY 267
+ + + C + + T+ A L + + P A+ + F+
Sbjct: 896 IASEKYKCSEEILTICAMLSVGNTIF----------------YRPKDKAFAADAARKLFF 939
Query: 268 CPMNMEKDVDKQKNILAQGAKSDYVVLINAMQGWEQALEHNYAHDYCRENFLTNNTLLLL 327
P QG D++ L+N W E YA +C ENF+ + ++
Sbjct: 940 HP---------------QG---DHLTLMNVFNQWR---ESGYAVQWCFENFIQHRSMKRA 978
Query: 328 RDMKDQFS 335
+D++DQ
Sbjct: 979 QDVRDQLE 986
>gi|1723910|sp|P53131.1|PRP43_YEAST RecName: Full=Pre-mRNA-splicing factor ATP-dependent RNA helicase
PRP43; AltName: Full=Helicase JA1
Length = 767
Score = 138 bits (347), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 98/318 (30%), Positives = 148/318 (46%), Gaps = 60/318 (18%)
Query: 31 RKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAG 90
RK+V++TNIAETS+TID IVYVVD G +K ++ + + +L IS A+A+QR GRAG
Sbjct: 370 RKVVISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASAQQRAGRAG 429
Query: 91 RVQEGVCYHLYSRAREQTFQ----DYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLN 146
R + G C+ LY+ E+ FQ + PEI R+ L V LE KK +
Sbjct: 430 RTRPGKCFRLYT---EEAFQKELIEQSYPEILRSNLSSTV--LELKKLGIDD-------- 476
Query: 147 TAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKM 206
V +DPP P ++ +L+ L + LDD+ +LTPLG ++ PLDP + M
Sbjct: 477 -------LVHFDFMDPPAPETMMRALEELNYLACLDDEGNLTPLGRLASQFPLDPMLAVM 529
Query: 207 LLMASIFSCVDPVFTVAASLGFKDAFYCPMIGKMLLMASIFSCVDPVFTVAASLGFKDAF 266
L+ + F C + T+ A L + F P K
Sbjct: 530 LIGSFEFQCSQEILTIVAMLSVPNVFIRPTKDK--------------------------- 562
Query: 267 YCPMNMEKDVDKQKNILAQGAKSDYVVLINAMQGWEQALEHNYA-HDYCRENFLTNNTLL 325
K D KNI A D++ L+N ++ + Y H +CR+++L +L
Sbjct: 563 -------KRADDAKNIFAH-PDGDHITLLNVYHAFKSDEAYEYGIHKWCRDHYLNYRSLS 614
Query: 326 LLRDMKDQFSRTMHEMNF 343
+++ Q R M+ N
Sbjct: 615 AADNIRSQLERLMNRYNL 632
>gi|61212955|sp|Q5RBD4.1|DHX35_PONAB RecName: Full=Probable ATP-dependent RNA helicase DHX35; AltName:
Full=DEAH box protein 35
Length = 720
Score = 136 bits (342), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/331 (29%), Positives = 153/331 (46%), Gaps = 65/331 (19%)
Query: 15 SGLKHLQNKSVFEL---GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIAT 71
+GL + VFE VRK+++ATN+AETSITI IVYV+DCG K+ ++ + I
Sbjct: 317 AGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIEC 376
Query: 72 LKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYP---LPEIQRTRLDEVVRT 128
L +S A+A QR GR GR + G CY LY+ E+ F P +PE+QR+ L V+
Sbjct: 377 LVVVPVSQASANQRAGRGGRSRSGKCYRLYT---EEAFDKLPQSTVPEMQRSNLAPVILQ 433
Query: 129 LESKKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLT 188
L++ V RF M PP S+ +L+LL + LD D LT
Sbjct: 434 LKALGIDNV-LRFHFM----------------SPPPAQSMVQALELLYALGGLDKDCRLT 476
Query: 189 -PLGYHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMIGKMLLMASIF 247
PLG +A+ PL+P KMLL + F C + ++AA + ++ F P
Sbjct: 477 EPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNIFVVP------------ 524
Query: 248 SCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQGAKSDYVVLINAMQGWEQALEH 307
P + + + + + D++ ++N +E ++H
Sbjct: 525 ---------------------PNQKSQAIRVHRKFAVE--EGDHLTMLNV---YEAFIKH 558
Query: 308 NYAHDYCRENFLTNNTLLLLRDMKDQFSRTM 338
N +C+E+FL L+ +++Q + +
Sbjct: 559 NKNSQWCQEHFLNYKGLVRAATVREQLKKLL 589
>gi|38502930|sp|Q7YR39.1|DHX16_PANTR RecName: Full=Putative pre-mRNA-splicing factor ATP-dependent RNA
helicase DHX16; AltName: Full=ATP-dependent RNA helicase
#3; AltName: Full=DEAH-box protein 16
Length = 1044
Score = 135 bits (341), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/309 (31%), Positives = 149/309 (48%), Gaps = 57/309 (18%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
G RK+V+ATNIAETS+TI+ I+YV+D G K +++ + + +L S A+A QR GR
Sbjct: 669 GARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGR 728
Query: 89 AGRVQEGVCYHLYSR-AREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNT 147
AGRV G C+ LY+ A + ++ +PEIQRT L VV L+S +++
Sbjct: 729 AGRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHD-------LMHF 781
Query: 148 AFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKML 207
F LDPP ++ L+L+ L + AL+ LT G +A+LP+DP + KM+
Sbjct: 782 DF----------LDPPPYETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMI 831
Query: 208 LMASIFSCVDPVFTVAASLGFKDAFYCPMIGKMLLMASIFSCVDPVFTVAASLGFKDAFY 267
L + +SC + + TVAA L ++ FY
Sbjct: 832 LASEKYSCSEEILTVAAMLSVNNSI---------------------------------FY 858
Query: 268 CPMNMEKDVDKQK-NILAQGAKSDYVVLINAMQGWEQALEHNYAHDYCRENFLTNNTLLL 326
P + D + N G D++VL+N W E Y+ +C ENF+ ++
Sbjct: 859 RPKDKVVHADNARVNFFLPGG--DHLVLLNVYTQW---AESGYSSQWCYENFVQFRSMRR 913
Query: 327 LRDMKDQFS 335
RD+++Q
Sbjct: 914 ARDVREQLE 922
>gi|3913425|sp|O22899.1|DHX15_ARATH RecName: Full=Probable pre-mRNA-splicing factor ATP-dependent RNA
helicase
Length = 729
Score = 135 bits (341), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/314 (30%), Positives = 151/314 (48%), Gaps = 56/314 (17%)
Query: 31 RKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAG 90
RKIV++TNIAETS+TID IVYV+D G K ++ + + +L IS A+A QR GRAG
Sbjct: 346 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSGRAG 405
Query: 91 RVQEGVCYHLYS-RAREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNTAF 149
R + G C+ LY+ ++ Q PEI R+ L V TL KK +
Sbjct: 406 RTRPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTL--KKLGIDD----------- 452
Query: 150 TPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKMLLM 209
V +DPP P ++ +L++L + ALDD+ +LT G +++ PLDPQ+ KML++
Sbjct: 453 ----LVHFDFMDPPAPETLMRALEVLNYLGALDDEGNLTKTGEIMSEFPLDPQMSKMLIV 508
Query: 210 ASIFSCVDPVFTVAASLGFKDAFYCPMIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCP 269
+ F+C + + +V+A M S+ +C F P
Sbjct: 509 SPEFNCSNEILSVSA------------------MLSVPNC----------------FVRP 534
Query: 270 MNMEKDVDKQKNILAQGAKSDYVVLINAMQGWEQALEHNYAHDYCRENFLTNNTLLLLRD 329
+K D+ K D++ L+N ++Q +N ++C ENF+ N + +
Sbjct: 535 REAQKAADEAKARFGH-IDGDHLTLLNVYHAYKQ---NNEDPNWCFENFVNNRAMKSADN 590
Query: 330 MKDQFSRTMHEMNF 343
++ Q R M N
Sbjct: 591 VRQQLVRIMSRFNL 604
>gi|26006959|sp|O60231.2|DHX16_HUMAN RecName: Full=Putative pre-mRNA-splicing factor ATP-dependent RNA
helicase DHX16; AltName: Full=ATP-dependent RNA helicase
#3; AltName: Full=DEAH-box protein 16
Length = 1041
Score = 135 bits (341), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/309 (31%), Positives = 149/309 (48%), Gaps = 57/309 (18%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
G RK+V+ATNIAETS+TI+ I+YV+D G K +++ + + +L S A+A QR GR
Sbjct: 666 GARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGR 725
Query: 89 AGRVQEGVCYHLYSR-AREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNT 147
AGRV G C+ LY+ A + ++ +PEIQRT L VV L+S +++
Sbjct: 726 AGRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIH-------DLMHF 778
Query: 148 AFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKML 207
F LDPP ++ L+L+ L + AL+ LT G +A+LP+DP + KM+
Sbjct: 779 DF----------LDPPPYETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMI 828
Query: 208 LMASIFSCVDPVFTVAASLGFKDAFYCPMIGKMLLMASIFSCVDPVFTVAASLGFKDAFY 267
L + +SC + + TVAA L ++ FY
Sbjct: 829 LASEKYSCSEEILTVAAMLSVNNSI---------------------------------FY 855
Query: 268 CPMNMEKDVDKQK-NILAQGAKSDYVVLINAMQGWEQALEHNYAHDYCRENFLTNNTLLL 326
P + D + N G D++VL+N W E Y+ +C ENF+ ++
Sbjct: 856 RPKDKVVHADNARVNFFLPGG--DHLVLLNVYTQW---AESGYSSQWCYENFVQFRSMRR 910
Query: 327 LRDMKDQFS 335
RD+++Q
Sbjct: 911 ARDVREQLE 919
>gi|75072475|sp|Q767K6.1|DHX16_PIG RecName: Full=Putative pre-mRNA-splicing factor ATP-dependent RNA
helicase DHX16; AltName: Full=DEAH-box protein 16
Length = 1045
Score = 135 bits (340), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 96/309 (31%), Positives = 149/309 (48%), Gaps = 57/309 (18%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
G RK+V+ATNIAETS+TI+ I+YV+D G K +++ + + +L S A+A QR GR
Sbjct: 670 GARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGR 729
Query: 89 AGRVQEGVCYHLYSR-AREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNT 147
AGRV G C+ LY+ A + ++ +PEIQRT L VV L+S +++
Sbjct: 730 AGRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHD-------LMHF 782
Query: 148 AFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKML 207
F LDPP ++ L+L+ L + AL+ LT G +A+LP+DP + KM+
Sbjct: 783 DF----------LDPPPYETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMI 832
Query: 208 LMASIFSCVDPVFTVAASLGFKDAFYCPMIGKMLLMASIFSCVDPVFTVAASLGFKDAFY 267
L + +SC + + TVAA L ++ FY
Sbjct: 833 LASEKYSCSEEILTVAAMLSVNNSI---------------------------------FY 859
Query: 268 CPMNMEKDVDKQK-NILAQGAKSDYVVLINAMQGWEQALEHNYAHDYCRENFLTNNTLLL 326
P + D + N G D++VL+N W E Y+ +C ENF+ ++
Sbjct: 860 RPKDKVVHADNARVNFFLPGG--DHLVLLNVYTQW---AESGYSSQWCYENFVQFRSMRR 914
Query: 327 LRDMKDQFS 335
RD+++Q
Sbjct: 915 ARDVREQLE 923
>gi|3913424|sp|O17438.1|DHX15_STRPU RecName: Full=Putative pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP1
Length = 455
Score = 135 bits (339), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 99/318 (31%), Positives = 156/318 (49%), Gaps = 57/318 (17%)
Query: 22 NKSVFELGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLAN 81
NK+ +G RK+V++TNIAETS+TID +V+V+D G K ++ + + +L IS A+
Sbjct: 175 NKANGAIG-RKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKAS 233
Query: 82 AKQRRGRAGRVQEGVCYHLYS-RAREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRR 140
A+QR GRAGR + G C+ LY+ +A + QD PEI R+ L VV L+ KK +
Sbjct: 234 AQQRVGRAGRTRPGKCFRLYTEKAYDSEMQDNTYPEILRSNLGTVV--LQLKKLGIDD-- 289
Query: 141 FKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLD 200
V +DPP P ++ +L+LL + ALDD LT LG +A+ PLD
Sbjct: 290 -------------LVHFDFMDPPAPETLMRALELLNYLGALDDSGDLTRLGSMMAEFPLD 336
Query: 201 PQIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMIGKMLLMASIFSCVDPVFTVAASL 260
PQ+ KM++ ++ +SC + + +V A M S+ C
Sbjct: 337 PQLAKMVIASTDYSCSNEILSVTA------------------MLSVPQC----------- 367
Query: 261 GFKDAFYCPMNMEKDVDKQKNILAQGAKSDYVVLINAMQGWEQALEHNYAHDYCRENFLT 320
F P +K D+ K A D++ L+N ++Q +N +C +NF+
Sbjct: 368 -----FLRPNEAKKLADEAKMRFAH-IDGDHLTLLNVYHAFKQ---NNEDPQWCYDNFIQ 418
Query: 321 NNTLLLLRDMKDQFSRTM 338
+L ++ Q +R M
Sbjct: 419 YRSLKSADSVRQQLARIM 436
>gi|20137971|sp|Q9H5Z1.2|DHX35_HUMAN RecName: Full=Probable ATP-dependent RNA helicase DHX35; AltName:
Full=DEAH box protein 35
Length = 703
Score = 134 bits (337), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 96/331 (29%), Positives = 152/331 (45%), Gaps = 65/331 (19%)
Query: 15 SGLKHLQNKSVFEL---GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIAT 71
+GL + VFE VRK+++ATN+AETSITI IVYV+DCG K+ ++ + I
Sbjct: 317 AGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIEC 376
Query: 72 LKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYP---LPEIQRTRLDEVVRT 128
L +S A+A QR GR GR + G CY LY+ E+ F P +PE+QR+ L V+
Sbjct: 377 LVVVPVSQASANQRAGRGGRSRSGKCYRLYT---EEAFDKLPQSTVPEMQRSNLAPVILQ 433
Query: 129 LESKKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLT 188
L++ V RF M PP S+ +L+LL + LD D LT
Sbjct: 434 LKALGIDNV-LRFHFM----------------SPPPAQSMVQALELLYALGGLDKDCRLT 476
Query: 189 -PLGYHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMIGKMLLMASIF 247
PLG +A+ PL+P KMLL + F C + ++AA + ++ F P
Sbjct: 477 EPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNIFVVP------------ 524
Query: 248 SCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQGAKSDYVVLINAMQGWEQALEH 307
P + + + + D++ ++N +E ++H
Sbjct: 525 ---------------------PNQKSHAIRVHRKFAVE--EGDHLTMLNI---YEAFIKH 558
Query: 308 NYAHDYCRENFLTNNTLLLLRDMKDQFSRTM 338
N +C+E+FL L+ +++Q + +
Sbjct: 559 NKDSKWCQEHFLNYKGLVRAATVREQLKKLL 589
>gi|2500543|sp|Q09530.1|MOG5_CAEEL RecName: Full=Probable pre-mRNA-splicing factor ATP-dependent RNA
helicase mog-5; AltName: Full=Masculinization of germline
protein 5; AltName: Full=Sex determination protein mog-5
Length = 1200
Score = 134 bits (336), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/323 (30%), Positives = 150/323 (46%), Gaps = 64/323 (19%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
G RK+V+ATNIAETS+TID I YVVD G K ++ K + +L IS A AKQR GR
Sbjct: 806 GKRKVVIATNIAETSLTIDGIFYVVDPGFVKQKIYNPKSGMDSLVVTPISQAAAKQRSGR 865
Query: 89 AGRVQEGVCYHLYSRAREQTFQD----YPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVM 144
AGR G CY LY+ E+ F+D P+PEIQRT L S ++ + +
Sbjct: 866 AGRTGPGKCYRLYT---ERAFRDEMLPTPVPEIQRT-------NLASTLLQLKAMGINNL 915
Query: 145 LNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIG 204
++ F +D P S+ +L L + ALD D LT LG +A+ PL+P +
Sbjct: 916 IDFDF----------MDAPPLDSMITALNTLHTLSALDGDGLLTKLGRRMAEFPLEPSLS 965
Query: 205 KMLLMASIFSCVDPVFTVAASLGFKDAFYCPMIGKMLLMASIFSCVDPVFTVAASLGFKD 264
K+L+M+ C + V T+ A L ++ FY P
Sbjct: 966 KLLIMSVDLGCSEEVLTIVAMLNVQNIFYRP----------------------------- 996
Query: 265 AFYCPMNMEKDVDKQKNILAQGAKSDYVVLINAMQGWEQALEHNYAHDYCRENFLTNNTL 324
++D QK + D++ L+ W+ H+++ +C ENF+ ++
Sbjct: 997 ------KEKQDHADQKKAKFHQPEGDHLTLLAVYNSWKN---HHFSQPWCFENFIQVRSM 1047
Query: 325 LLLRDMKDQFSRTM--HEMNFIS 345
+D++ Q M H++ +S
Sbjct: 1048 KRAQDIRKQLLGIMDRHKLLMVS 1070
>gi|3913431|sp|O42643.1|PRP22_SCHPO RecName: Full=Pre-mRNA-splicing factor ATP-dependent RNA helicase
prp22
Length = 1168
Score = 133 bits (335), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/311 (30%), Positives = 149/311 (47%), Gaps = 56/311 (18%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
G RK+V+ATNIAETS+TID I YVVD G K S FD K + +L IS A A+QR GR
Sbjct: 777 GGRKVVIATNIAETSLTIDGIYYVVDPGFVKQSCFDPKLGMDSLIVTPISQAQARQRSGR 836
Query: 89 AGRVQEGVCYHLYSR-AREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNT 147
AGR G CY LY+ A P+PEIQR L + L++ +LN
Sbjct: 837 AGRTGPGKCYRLYTESAYRNEMLPSPIPEIQRQNLSHTILMLKAMG-------INDLLNF 889
Query: 148 AFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKML 207
F +DPP ++ +L+ L + ALDD+ LTPLG +A P++PQ+ K+L
Sbjct: 890 DF----------MDPPPAQTMIAALQNLYALSALDDEGLLTPLGRKMADFPMEPQLSKVL 939
Query: 208 LMASIFSCVDPVFTVAASLGFKDAFYCPMIGKMLLMASIFSCVDPVFTVAASLGFKDAFY 267
+ + C + + ++ A ML + +I+S
Sbjct: 940 ITSVELGCSEEMLSIIA---------------MLSVPNIWS------------------- 965
Query: 268 CPMNMEKDVDKQKNILAQGAKSDYVVLINAMQGWEQALEHNYAHDYCRENFLTNNTLLLL 327
P +++ D+Q+ A +SD++ L+N W+ + + ++C E+++ +
Sbjct: 966 RPREKQQEADRQRAQFAN-PESDHLTLLNVYTTWKM---NRCSDNWCYEHYIQARGMRRA 1021
Query: 328 RDMKDQFSRTM 338
D++ Q R M
Sbjct: 1022 EDVRKQLIRLM 1032
>gi|81912817|sp|Q80VY9.1|DHX33_MOUSE RecName: Full=Putative ATP-dependent RNA helicase DHX33; AltName:
Full=DEAH box protein 33
Length = 698
Score = 133 bits (334), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 98/351 (27%), Positives = 164/351 (46%), Gaps = 70/351 (19%)
Query: 12 CPS-------SGLKHLQNKSVFE---LGVRKIVLATNIAETSITIDDIVYVVDCGKTKMS 61
CPS + L + Q VF+ G RK++++TNIAETSITI I YVVD G K
Sbjct: 310 CPSMLVLPLYASLPYSQQLRVFQGAPKGYRKVIISTNIAETSITITGIKYVVDTGMVKAK 369
Query: 62 NFDVKDNIATLKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTR 121
++ + L + +S A QR GRAGR G+CY LY+ + F+ +PEIQR
Sbjct: 370 KYNPDSGLEVLAVQRVSKTQAWQRTGRAGREDSGICYRLYTEDEFEKFEKMTVPEIQRCN 429
Query: 122 LDEVVRTLESKKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDAL 181
L V+ ++++ + +L F + P P ++ ++ L L+ AL
Sbjct: 430 LASVI-------LQLLAMKVPNVLTFDF----------MSKPSPDHIEAAIAQLDLLGAL 472
Query: 182 ---DDDEHLTPLGYHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMIG 238
DD LTP+G +A PL+P+ K +L++S F C + + T+ + L Y P
Sbjct: 473 EHKDDQLTLTPIGRKMAAFPLEPRFAKTILLSSKFHCTEEILTIVSLLSVDSVLYNPPAR 532
Query: 239 KMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQGAKSDYVVLINAM 298
+ D V +V ++K I ++G D++ L+N
Sbjct: 533 R-----------DEVQSV---------------------RKKFISSEG---DHITLLNIY 557
Query: 299 QGWEQALEHNYAHDYCRENFLTNNTLLLLRDMKDQFSRTMHEMN--FISSR 347
+ ++ + D+C+ENF+ + +LL+ +++ Q +M+ +SSR
Sbjct: 558 RTFKNIGGNK---DWCKENFVNSKNMLLVAEVRAQLREICLKMSMPIMSSR 605
>gi|130830|sp|P24384.1|PRP22_YEAST RecName: Full=Pre-mRNA-splicing factor ATP-dependent RNA helicase
PRP22
Length = 1145
Score = 132 bits (333), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 103/309 (33%), Positives = 143/309 (46%), Gaps = 58/309 (18%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
G RK+V ATNIAETSITID I YVVD G K++ ++ + I L IS A A QR+GR
Sbjct: 749 GSRKVVFATNIAETSITIDGIYYVVDPGFAKINIYNARAGIEQLIVSPISQAQANQRKGR 808
Query: 89 AGRVQEGVCYHLYSR-AREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNT 147
AGR G CY LY+ A + +PEIQR L + L++ +L
Sbjct: 809 AGRTGPGKCYRLYTESAFYNEMLENTVPEIQRQNLSHTILMLKAMGIND-------LLKF 861
Query: 148 AFTPYVWVPKQVLDPPDPASVQL-SLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKM 206
F +DPP P ++ L +L L + +LDD+ LT LG ++ P+DP + +
Sbjct: 862 DF----------MDPP-PKNLMLNALTELYHLQSLDDEGKLTNLGKEMSLFPMDPTLSRS 910
Query: 207 LLMASIFSCVDPVFTVAASLGFKDAFYCPMIGKMLLMASIFSCVDPVFTVAASLGFKDAF 266
LL + C D + T+ + L ++ FY P KD
Sbjct: 911 LLSSVDNQCSDEIVTIISMLSVQNVFYRP---------------------------KD-- 941
Query: 267 YCPMNMEKDVDKQKNILAQGAKSDYVVLINAMQGWEQALEHNYAHDYCRENFLTNNTLLL 326
+E D K K G D++ L+N W+QA NY+ YC+ NFL L
Sbjct: 942 ---RQLEADSKKAKFHHPYG---DHLTLLNVYTRWQQA---NYSEQYCKTNFLHFRHLKR 992
Query: 327 LRDMKDQFS 335
RD+K Q S
Sbjct: 993 ARDVKSQIS 1001
>gi|3913435|sp|Q20875.1|DHX15_CAEEL RecName: Full=Putative pre-mRNA-splicing factor ATP-dependent RNA
helicase F56D2.6
Length = 739
Score = 131 bits (330), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 95/314 (30%), Positives = 152/314 (48%), Gaps = 56/314 (17%)
Query: 31 RKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAG 90
RK V++TNIAETS+TID +V+V+D G +K ++ + + +L IS A+A QR GRAG
Sbjct: 359 RKCVISTNIAETSLTIDGVVFVIDPGFSKQKVYNPRIRVESLLVCPISKASAMQRAGRAG 418
Query: 91 RVQEGVCYHLYSR-AREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNTAF 149
R + G C+ LY+ A QD PEI R+ L VV L+ KK + +++ F
Sbjct: 419 RTKPGKCFRLYTETAYGSEMQDQTYPEILRSNLGSVV--LQLKKLGT-----EDLVHFDF 471
Query: 150 TPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKMLLM 209
+DPP P ++ +L+LL + A++DD LT LG +A+ PLDPQ+ KML+
Sbjct: 472 ----------MDPPAPETLMRALELLNYLQAINDDGELTELGSLMAEFPLDPQLAKMLIT 521
Query: 210 ASIFSCVDPVFTVAASLGFKDAFYCPMIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCP 269
++ +C + + ++ A M S+ C + P
Sbjct: 522 STELNCSNEILSITA------------------MLSVPQC----------------WVRP 547
Query: 270 MNMEKDVDKQKNILAQGAKSDYVVLINAMQGWEQALEHNYAHDYCRENFLTNNTLLLLRD 329
M + D+ K A D++ L+N ++Q E +C +NF+ T+
Sbjct: 548 NEMRTEADEAKARFAH-IDGDHLTLLNVYHSFKQNQED---PQWCYDNFINYRTMKTADT 603
Query: 330 MKDQFSRTMHEMNF 343
++ Q SR M + N
Sbjct: 604 VRTQLSRVMDKYNL 617
>gi|548590|sp|P15938.2|PRP16_YEAST RecName: Full=Pre-mRNA-splicing factor ATP-dependent RNA helicase
PRP16
Length = 1071
Score = 131 bits (329), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 99/308 (32%), Positives = 145/308 (47%), Gaps = 61/308 (19%)
Query: 31 RKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAG 90
RKI++ATNIAETS+TI I YV+DCG +K+ ++ K + +L IS ANA QR GRAG
Sbjct: 632 RKIIIATNIAETSLTIKGIRYVIDCGYSKLKVYNPKIGLDSLVITPISKANADQRSGRAG 691
Query: 91 RVQEGVCYHLYSRAREQTFQD----YPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLN 146
R G Y LY+ E TF++ +PEIQRT L + L+S +F
Sbjct: 692 RTAPGTAYRLYT---EDTFKEDMYLQTIPEIQRTNLSNTLLLLKSLDVTDELSKF----- 743
Query: 147 TAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKM 206
P++ D P + SL L I A+D LTPLG +AK PL P + K+
Sbjct: 744 ----PFI-------DKPPLQTFLSSLYELWFIGAIDTSGQLTPLGLQMAKFPLQPSLSKI 792
Query: 207 LLMASIFSCVDPVFTVAASLGFKDAFYCPMIGKMLLMASIFSCVDPVFTVAASLGFKDAF 266
LL+A C D + T+ + L FY P
Sbjct: 793 LLIAVRNGCSDEMLTIVSMLSVPQVFYRPK------------------------------ 822
Query: 267 YCPMNMEKDVDKQKNILAQGAKSDYVVLINAMQGWEQALEHNYAHDYCRENFLTNNTLLL 326
E D+ + K + AKSD++ L+N + W +N++ +C ++F+ +L+
Sbjct: 823 --ERQKEADIARNKFFI---AKSDHLTLLNVFEQWRA---NNFSSHWCNKHFVQYKSLVR 874
Query: 327 LRDMKDQF 334
RD++DQ
Sbjct: 875 ARDIRDQL 882
>gi|187471036|sp|A2A4P0.1|DHX8_MOUSE RecName: Full=ATP-dependent RNA helicase DHX8; AltName: Full=DEAH box
protein 8
Length = 1244
Score = 130 bits (327), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/320 (30%), Positives = 151/320 (47%), Gaps = 58/320 (18%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
G RK+V+ATNIAETS+TID I YVVD G K ++ K I L IS A AKQR GR
Sbjct: 855 GSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGR 914
Query: 89 AGRVQEGVCYHLYS-RAREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNT 147
AGR G CY LY+ RA +PEIQRT L V +L++ +L+
Sbjct: 915 AGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMG-------INDLLSF 967
Query: 148 AFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKML 207
F +D P ++ +++ L + ALDD+ LT LG +A+ PL+P + KML
Sbjct: 968 DF----------MDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKML 1017
Query: 208 LMASIFSCVDPVFTVAASLGFKDAFYCPMIGKMLLMASIFSCVDPVFTVAASLGFKDAFY 267
+M+ C + + T+ + L ++ FY P + L
Sbjct: 1018 IMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQAL-------------------------- 1051
Query: 268 CPMNMEKDVDKQKNILAQGAKSDYVVLINAMQGWEQALEHNYAHDYCRENFLTNNTLLLL 327
D++K Q + D++ L+ W+ + +++ +C ENF+ +L
Sbjct: 1052 --------ADQKKAKFHQ-TEGDHLTLLAVYNSWKN---NKFSNPWCYENFIQARSLRRA 1099
Query: 328 RDMKDQFSRTM--HEMNFIS 345
+D++ Q M H+++ +S
Sbjct: 1100 QDIRKQMLGIMDRHKLDVVS 1119
>gi|3023637|sp|Q14562.1|DHX8_HUMAN RecName: Full=ATP-dependent RNA helicase DHX8; AltName: Full=DEAH box
protein 8; AltName: Full=RNA helicase HRH1
Length = 1220
Score = 130 bits (326), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/320 (30%), Positives = 151/320 (47%), Gaps = 58/320 (18%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
G RK+V+ATNIAETS+TID I YVVD G K ++ K I L IS A AKQR GR
Sbjct: 831 GSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGR 890
Query: 89 AGRVQEGVCYHLYS-RAREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNT 147
AGR G CY LY+ RA +PEIQRT L V +L++ +L+
Sbjct: 891 AGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMG-------INDLLSF 943
Query: 148 AFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKML 207
F +D P ++ +++ L + ALDD+ LT LG +A+ PL+P + KML
Sbjct: 944 DF----------MDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKML 993
Query: 208 LMASIFSCVDPVFTVAASLGFKDAFYCPMIGKMLLMASIFSCVDPVFTVAASLGFKDAFY 267
+M+ C + + T+ + L ++ FY P + L
Sbjct: 994 IMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQAL-------------------------- 1027
Query: 268 CPMNMEKDVDKQKNILAQGAKSDYVVLINAMQGWEQALEHNYAHDYCRENFLTNNTLLLL 327
D++K Q + D++ L+ W+ + +++ +C ENF+ +L
Sbjct: 1028 --------ADQKKAKFHQ-TEGDHLTLLAVYNSWKN---NKFSNPWCYENFIQARSLRRA 1075
Query: 328 RDMKDQFSRTM--HEMNFIS 345
+D++ Q M H+++ +S
Sbjct: 1076 QDIRKQMLGIMDRHKLDVVS 1095
>gi|732174|sp|P34498.2|MOG1_CAEEL RecName: Full=Probable pre-mRNA-splicing factor ATP-dependent RNA
helicase mog-1; AltName: Full=Masculinization of
germline protein 1; AltName: Full=Sex determination
protein mog-1
Length = 1131
Score = 130 bits (326), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/319 (30%), Positives = 151/319 (47%), Gaps = 62/319 (19%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
G+RK ++ATNIAETS+T+D I++V+D G KM ++ + + L +S A+A QR GR
Sbjct: 707 GMRKAIVATNIAETSLTVDGILFVIDPGFCKMKVYNPRIGMDALSIFPVSQASANQRTGR 766
Query: 89 AGRVQEGVCYHLYSRAREQTFQDYPL----PEIQRTRLDEVVRTLESKKFKMVSRRFKVM 144
AGR G CY LY+ E+ F+D L PEIQRT L VV L+S +
Sbjct: 767 AGRTGPGQCYRLYT---ERQFKDELLKSTVPEIQRTNLANVVLLLKSLG-------VDDL 816
Query: 145 LNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIG 204
L F +D P ++ S+ L + ALD+ LTP+G + + PLDP +
Sbjct: 817 LKFHF----------MDAPPQDNMLNSMYQLWTLGALDNTGQLTPMGRKMVEFPLDPTLS 866
Query: 205 KMLLMASIFSCVDPVFTVAASLGFKDAFYCPMIGKMLLMASIFSCVDPVFTVAASLGFKD 264
KML+M++ C D V T+ + ML + +I
Sbjct: 867 KMLIMSAEMGCSDEVLTIVS---------------MLSVPAI------------------ 893
Query: 265 AFYCPMNMEKDVDKQKNILAQGAKSDYVVLINAMQGWEQALEHNYAHDYCRENFLTNNTL 324
F+ P E++ D +K Q +SD++ +N W H Y+ +C +N+L L
Sbjct: 894 -FFRPKGREEEADAKKEKF-QVPESDHLTFLNVYIQWRT---HKYSAKWCADNYLHVKAL 948
Query: 325 LLLRDMKDQFSRTMHEMNF 343
+R+++ Q M ++
Sbjct: 949 KKVREVRAQLKEIMQDLKL 967
Database: swissprot
Posted date: Jul 29, 2013 6:00 PM
Number of letters in database: 169,969,125
Number of sequences in database: 455,621
Lambda K H
0.324 0.137 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 107,963,930
Number of Sequences: 455621
Number of extensions: 4178929
Number of successful extensions: 14079
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 116
Number of HSP's successfully gapped in prelim test: 52
Number of HSP's that attempted gapping in prelim test: 13623
Number of HSP's gapped (non-prelim): 270
length of query: 350
length of database: 169,969,125
effective HSP length: 118
effective length of query: 232
effective length of database: 116,205,847
effective search space: 26959756504
effective search space used: 26959756504
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 61 (28.1 bits)