Your job contains 1 sequence.
>psy6093
MAIFFQIWFLQCPSSGLKHLQNKSVFELGVRKIVLATNIAETSITIDDIVYVVDCGKTKM
SNFDVKDNIATLKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYPLPEIQRT
RLDEVVRTLESKKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDA
LDDDEHLTPLGYHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMIGKM
LLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQGAKSDYVVLINAMQG
WEQALEHNYAHDYCRENFLTNNTLLLLRDMKDQFSRTMHEMNFISSRTWS
The BLAST search returned 5 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy6093
(350 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
ZFIN|ZDB-GENE-050419-20 - symbol:si:dkey-119o24.1 "si:dke... 544 5.4e-53 2
UNIPROTKB|E7EWK3 - symbol:DHX36 "Probable ATP-dependent R... 534 4.2e-51 1
UNIPROTKB|F6V8H1 - symbol:DHX36 "Uncharacterized protein"... 540 5.2e-51 1
UNIPROTKB|I3LCY3 - symbol:DHX36 "Uncharacterized protein"... 538 5.5e-51 1
UNIPROTKB|E2QTL7 - symbol:DHX36 "Uncharacterized protein"... 537 7.2e-51 1
RGD|1308767 - symbol:Dhx36 "DEAH (Asp-Glu-Ala-His) box po... 537 7.5e-51 1
MGI|MGI:1919412 - symbol:Dhx36 "DEAH (Asp-Glu-Ala-His) bo... 536 9.6e-51 1
UNIPROTKB|Q05B79 - symbol:DHX36 "Uncharacterized protein"... 535 1.3e-50 1
UNIPROTKB|Q9H2U1 - symbol:DHX36 "Probable ATP-dependent R... 534 1.6e-50 1
UNIPROTKB|H7C5F5 - symbol:DHX36 "Probable ATP-dependent R... 337 2.3e-50 2
UNIPROTKB|F5GZS0 - symbol:DHX36 "Probable ATP-dependent R... 531 3.3e-50 1
UNIPROTKB|E1C550 - symbol:DHX36 "Uncharacterized protein"... 524 1.8e-49 1
FB|FBgn0032883 - symbol:CG9323 species:7227 "Drosophila m... 510 5.0e-48 1
TAIR|locus:2008144 - symbol:AT1G48650 species:3702 "Arabi... 506 2.8e-47 1
TAIR|locus:2039280 - symbol:AT2G35920 species:3702 "Arabi... 500 7.3e-47 1
TAIR|locus:2196255 - symbol:AT1G58050 species:3702 "Arabi... 415 1.8e-45 2
UNIPROTKB|F1P1F4 - symbol:DHX30 "Putative ATP-dependent R... 372 4.4e-45 2
UNIPROTKB|Q5ZI74 - symbol:DHX30 "Putative ATP-dependent R... 372 4.4e-45 2
TAIR|locus:2038796 - symbol:AT2G01130 species:3702 "Arabi... 478 2.3e-44 1
TAIR|locus:504954904 - symbol:ABO6 "ABA overly sensitive ... 460 2.1e-42 1
UNIPROTKB|I3LRK0 - symbol:I3LRK0 "Uncharacterized protein... 444 6.6e-42 1
ZFIN|ZDB-GENE-030131-4078 - symbol:dhx57 "DEAH (Asp-Glu-A... 456 8.6e-42 1
UNIPROTKB|F1NS70 - symbol:YTHDC2 "Uncharacterized protein... 455 9.7e-42 1
UNIPROTKB|H7C109 - symbol:DHX57 "Putative ATP-dependent R... 441 2.7e-41 1
ASPGD|ASPL0000008624 - symbol:AN5839 species:162425 "Emer... 373 9.0e-41 2
UNIPROTKB|F1M8G5 - symbol:Dhx57 "Protein Dhx57" species:1... 445 1.1e-40 1
UNIPROTKB|F1LSC4 - symbol:Dhx57 "Protein Dhx57" species:1... 445 1.2e-40 1
MGI|MGI:2147067 - symbol:Dhx57 "DEAH (Asp-Glu-Ala-Asp/His... 442 2.5e-40 1
UNIPROTKB|E2QX71 - symbol:DHX57 "Uncharacterized protein"... 441 3.2e-40 1
UNIPROTKB|Q6P158 - symbol:DHX57 "Putative ATP-dependent R... 441 3.2e-40 1
UNIPROTKB|F1N1A2 - symbol:DHX57 "Uncharacterized protein"... 440 4.1e-40 1
UNIPROTKB|Q14147 - symbol:DHX34 "Probable ATP-dependent R... 274 7.6e-40 3
FB|FBgn0030246 - symbol:CG1582 species:7227 "Drosophila m... 434 1.6e-39 1
UNIPROTKB|F1MNU7 - symbol:YTHDC2 "Uncharacterized protein... 431 4.0e-39 1
TAIR|locus:2196265 - symbol:AT1G58060 species:3702 "Arabi... 431 4.1e-39 1
UNIPROTKB|J9PAM3 - symbol:YTHDC2 "Uncharacterized protein... 427 5.3e-39 1
CGD|CAL0005664 - symbol:orf19.6818 species:5476 "Candida ... 375 6.0e-39 2
UNIPROTKB|Q5ADM3 - symbol:CaO19.14110 "Putative uncharact... 375 6.0e-39 2
UNIPROTKB|E1C9G0 - symbol:DHX57 "Uncharacterized protein"... 429 6.1e-39 1
UNIPROTKB|J3KR71 - symbol:DHX34 "Probable ATP-dependent R... 268 6.8e-39 2
UNIPROTKB|F1RLG0 - symbol:YTHDC2 "Uncharacterized protein... 426 9.1e-39 1
UNIPROTKB|E2QZR7 - symbol:YTHDC2 "Uncharacterized protein... 427 1.0e-38 1
UNIPROTKB|Q9H6S0 - symbol:YTHDC2 "Probable ATP-dependent ... 427 1.1e-38 1
MGI|MGI:2448561 - symbol:Ythdc2 "YTH domain containing 2"... 427 1.1e-38 1
TAIR|locus:2052841 - symbol:HVT1 "helicase in vascular ti... 426 1.1e-38 1
TAIR|locus:2009200 - symbol:NIH "nuclear DEIH-boxhelicase... 416 2.2e-38 2
UNIPROTKB|E1BJ90 - symbol:DHX34 "Uncharacterized protein"... 273 2.8e-38 3
MGI|MGI:1918973 - symbol:Dhx34 "DEAH (Asp-Glu-Ala-His) bo... 276 3.3e-38 2
ZFIN|ZDB-GENE-061207-30 - symbol:dhx34 "DEAH (Asp-Glu-Ala... 284 5.3e-38 2
UNIPROTKB|E1C388 - symbol:DHX29 "Uncharacterized protein"... 415 1.9e-37 1
DICTYBASE|DDB_G0267516 - symbol:dhx57 "RWD domain-contain... 413 3.4e-37 1
POMBASE|SPBC15C4.05 - symbol:SPBC15C4.05 "ATP-dependent R... 362 5.5e-37 2
UNIPROTKB|E2RTK4 - symbol:DHX34 "Uncharacterized protein"... 271 9.8e-37 2
UNIPROTKB|E2RTK2 - symbol:DHX34 "Uncharacterized protein"... 271 1.1e-36 2
RGD|2318361 - symbol:Dhx29 "DEAH (Asp-Glu-Ala-His) box po... 402 4.6e-36 1
UNIPROTKB|E1B9N7 - symbol:DHX29 "Uncharacterized protein"... 399 9.6e-36 1
UNIPROTKB|Q7Z478 - symbol:DHX29 "ATP-dependent RNA helica... 398 1.2e-35 1
MGI|MGI:2145374 - symbol:Dhx29 "DEAH (Asp-Glu-Ala-His) bo... 397 1.6e-35 1
UNIPROTKB|F1SLN0 - symbol:DHX29 "Uncharacterized protein"... 397 1.6e-35 1
UNIPROTKB|E2RID8 - symbol:DHX29 "Uncharacterized protein"... 397 1.6e-35 1
UNIPROTKB|J9P6V4 - symbol:DHX29 "Uncharacterized protein"... 397 1.6e-35 1
UNIPROTKB|I3LG95 - symbol:DHX29 "Uncharacterized protein"... 397 1.6e-35 1
UNIPROTKB|I3LQ47 - symbol:DHX29 "Uncharacterized protein"... 397 1.6e-35 1
UNIPROTKB|F1RLY9 - symbol:DHX34 "Uncharacterized protein"... 268 3.0e-35 2
RGD|1308888 - symbol:Dhx30 "DEAH (Asp-Glu-Ala-His) box po... 379 1.0e-33 1
UNIPROTKB|Q5BJS0 - symbol:Dhx30 "Putative ATP-dependent R... 379 1.0e-33 1
MGI|MGI:1920081 - symbol:Dhx30 "DEAH (Asp-Glu-Ala-His) bo... 379 1.1e-33 1
UNIPROTKB|D4A1V3 - symbol:Dhx30 "Putative ATP-dependent R... 379 1.1e-33 1
UNIPROTKB|F1N0J0 - symbol:DHX30 "Putative ATP-dependent R... 378 1.4e-33 1
UNIPROTKB|Q2NKY8 - symbol:DHX30 "Putative ATP-dependent R... 378 1.4e-33 1
POMBASE|SPCC895.09c - symbol:ucp12 "ATP-dependent RNA hel... 378 1.6e-33 1
UNIPROTKB|H7BXY3 - symbol:DHX30 "Putative ATP-dependent R... 377 1.6e-33 1
UNIPROTKB|Q7L2E3 - symbol:DHX30 "Putative ATP-dependent R... 377 1.7e-33 1
UNIPROTKB|J9P3P6 - symbol:DHX30 "Uncharacterized protein"... 376 2.0e-33 1
UNIPROTKB|J9P264 - symbol:DHX30 "Uncharacterized protein"... 376 2.2e-33 1
UNIPROTKB|F1SLI4 - symbol:DHX30 "Uncharacterized protein"... 376 2.3e-33 1
UNIPROTKB|E2RL62 - symbol:DHX30 "Uncharacterized protein"... 376 2.3e-33 1
DICTYBASE|DDB_G0275313 - symbol:dhx9 "ATP-dependent RNA h... 372 8.1e-33 1
UNIPROTKB|G4MR96 - symbol:MGG_04709 "Uncharacterized prot... 371 1.1e-32 1
ZFIN|ZDB-GENE-070912-171 - symbol:dhx9 "DEAH (Asp-Glu-Ala... 369 1.3e-32 1
UNIPROTKB|Q5R607 - symbol:DHX30 "Putative ATP-dependent R... 368 1.6e-32 1
UNIPROTKB|Q5R874 - symbol:DHX9 "ATP-dependent RNA helicas... 368 1.7e-32 1
UNIPROTKB|Q08211 - symbol:DHX9 "ATP-dependent RNA helicas... 368 1.7e-32 1
FB|FBgn0002774 - symbol:mle "maleless" species:7227 "Dros... 365 3.7e-32 1
UNIPROTKB|E2RNT3 - symbol:DHX9 "Uncharacterized protein" ... 364 4.6e-32 1
UNIPROTKB|G5E5N3 - symbol:DHX9 "ATP-dependent RNA helicas... 363 6.0e-32 1
UNIPROTKB|Q28141 - symbol:DHX9 "ATP-dependent RNA helicas... 363 6.0e-32 1
UNIPROTKB|I3LHZ6 - symbol:DHX9 "Uncharacterized protein" ... 361 9.7e-32 1
RGD|1308548 - symbol:Dhx9 "DEAH (Asp-Glu-Ala-His) box pol... 360 1.1e-31 1
MGI|MGI:108177 - symbol:Dhx9 "DEAH (Asp-Glu-Ala-His) box ... 360 1.4e-31 1
UNIPROTKB|Q68FK8 - symbol:dhx9 "ATP-dependent RNA helicas... 354 5.3e-31 1
UNIPROTKB|G4MZR9 - symbol:MGG_07059 "Pre-mRNA-splicing fa... 350 1.7e-30 1
UNIPROTKB|G4NI12 - symbol:MGG_17793 "Uncharacterized prot... 349 2.2e-30 1
FB|FBgn0030833 - symbol:CG8915 species:7227 "Drosophila m... 338 1.7e-29 1
TAIR|locus:2010549 - symbol:AT1G27900 species:3702 "Arabi... 277 2.1e-29 2
SGD|S000004411 - symbol:YLR419W "Putative helicase with l... 308 1.2e-28 2
CGD|CAL0004768 - symbol:PRP22 species:5476 "Candida albic... 329 1.7e-28 1
DICTYBASE|DDB_G0285843 - symbol:helD "putative RNA splici... 330 2.2e-28 1
TAIR|locus:2062492 - symbol:MEE29 "maternal effect embryo... 323 7.9e-28 1
ZFIN|ZDB-GENE-030131-650 - symbol:dhx15 "DEAH (Asp-Glu-Al... 320 9.1e-28 1
WARNING: Descriptions of 201 database sequences were not reported due to the
limiting value of parameter V = 100.
>ZFIN|ZDB-GENE-050419-20 [details] [associations]
symbol:si:dkey-119o24.1 "si:dkey-119o24.1"
species:7955 "Danio rerio" [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-050419-20 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000247063 GeneTree:ENSGT00550000074257
HOVERGEN:HBG081438 KO:K14442 OrthoDB:EOG4K6G3J OMA:GRIAYND
EMBL:BX908763 EMBL:BX927166 IPI:IPI00633899 RefSeq:NP_001122016.1
UniGene:Dr.130296 Ensembl:ENSDART00000109467 GeneID:569072
KEGG:dre:569072 InParanoid:A3KQN8 NextBio:20889491 Uniprot:A3KQN8
Length = 1037
Score = 544 (196.6 bits), Expect = 5.4e-53, Sum P(2) = 5.4e-53
Identities = 118/243 (48%), Positives = 161/243 (66%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
GVRKIV+ATNIAETSITIDD+VYV+D GK K ++FD ++NI T+ EW+S+ANAKQR+GR
Sbjct: 566 GVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNIRTMTAEWVSIANAKQRKGR 625
Query: 89 AGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNTA 148
AGRV G CYHLY+ R +Y LPEIQRT L+E+ L+ K K+
Sbjct: 626 AGRVSPGKCYHLYNGLRASLLDNYQLPEIQRTPLEELC--LQIKVLKL------------ 671
Query: 149 FTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKMLL 208
P ++ +DPP +++L++ L ++ALD DE LTPLG+HLA++P++P IGKM+L
Sbjct: 672 -GPIATFLQKTMDPPSDRAIELAITHLVDLNALDRDEKLTPLGFHLARMPVEPHIGKMIL 730
Query: 209 MASIFSCVDPVFTVAASLGFKDAFYCPMIGKMLL------MASIFSCVDPVFTVAASLGF 262
++ C+DPV T+AASL FKD F+ P+ GK + M S S D + V A LG+
Sbjct: 731 FGALLGCLDPVLTIAASLSFKDPFFIPL-GKEKIADQRRKMFSQNSRSDHLSIVNAFLGW 789
Query: 263 KDA 265
+DA
Sbjct: 790 EDA 792
Score = 241 (89.9 bits), Expect = 3.2e-18, Sum P(2) = 3.2e-18
Identities = 42/115 (36%), Positives = 70/115 (60%)
Query: 235 PMIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQGAKSDYVVL 294
P IGKM+L ++ C+DPV T+AASL FKD F+ P+ EK D+++ + +Q ++SD++ +
Sbjct: 723 PHIGKMILFGALLGCLDPVLTIAASLSFKDPFFIPLGKEKIADQRRKMFSQNSRSDHLSI 782
Query: 295 INAMQGWEQALEHN--YAHDYCRENFXXXXXXXXXRDMKDQFSRTMHEMNFISSR 347
+NA GWE A + +YC +NF ++MK QF+ + F++S+
Sbjct: 783 VNAFLGWEDAKRQGSRFEREYCWDNFLSANTLQMLQNMKGQFAEHLLRAGFVNSK 837
Score = 40 (19.1 bits), Expect = 5.4e-53, Sum P(2) = 5.4e-53
Identities = 12/47 (25%), Positives = 20/47 (42%)
Query: 8 WFLQCPS-SGLKHLQNKSVFELGVRKIVLATNIAETSITIDDIVYVV 53
W P S + HL + E V+ +L T + + DD+ V+
Sbjct: 331 WLHSDPYLSSITHLVLDEIHERSVQSDILITIVKDLLTARDDLKVVL 377
>UNIPROTKB|E7EWK3 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0009615 GO:GO:0003725
EMBL:AC018452 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
EMBL:AC134026 HGNC:HGNC:14410 IPI:IPI00945848
ProteinModelPortal:E7EWK3 SMR:E7EWK3 Ensembl:ENST00000481941
ArrayExpress:E7EWK3 Bgee:E7EWK3 Uniprot:E7EWK3
Length = 797
Score = 534 (193.0 bits), Expect = 4.2e-51, P = 4.2e-51
Identities = 119/235 (50%), Positives = 155/235 (65%)
Query: 9 FLQCPSSGLKHLQNKS-VFEL---GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFD 64
FL P L N++ VF+ GVRKIV+ATNIAETSITIDD+VYV+D GK K ++FD
Sbjct: 433 FLIIPLHSLMPTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFD 492
Query: 65 VKDNIATLKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDE 124
++NI+T+ EW+S ANAKQR+GRAGRVQ G CYHLY+ R DY LPEI RT L+E
Sbjct: 493 TQNNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEE 552
Query: 125 VVRTLESKKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDD 184
+ L+ K +L Y +++DPP +V LS++ L ++ALD
Sbjct: 553 LC--LQIK-----------ILRLGGIAYFL--SRLMDPPSNEAVLLSIRHLMELNALDKQ 597
Query: 185 EHLTPLGYHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMIGK 239
E LTPLG HLA+LP++P IGKM+L ++F C+DPV T+AASL FKD F P+ GK
Sbjct: 598 EELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPL-GK 651
Score = 249 (92.7 bits), Expect = 1.3e-19, P = 1.3e-19
Identities = 48/115 (41%), Positives = 68/115 (59%)
Query: 235 PMIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQGAKSDYVVL 294
P IGKM+L ++F C+DPV T+AASL FKD F P+ EK D ++ LA+ +SD++ +
Sbjct: 614 PHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKIADARRKELAKDTRSDHLTV 673
Query: 295 INAMQGWEQALEHN--YAHDYCRENFXXXXXXXXXRDMKDQFSRTMHEMNFISSR 347
+NA +GWE+A Y DYC E F +MK QF+ + F+SSR
Sbjct: 674 VNAFEGWEEARRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSR 728
>UNIPROTKB|F6V8H1 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 OMA:RIRNRSY Ensembl:ENSCAFT00000013769
EMBL:AAEX03013695 Uniprot:F6V8H1
Length = 1122
Score = 540 (195.1 bits), Expect = 5.2e-51, P = 5.2e-51
Identities = 120/235 (51%), Positives = 155/235 (65%)
Query: 9 FLQCPSSGLKHLQNKS-VFEL---GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFD 64
FL P L N++ VF+ GVRKIV+ATNIAETSITIDD+VYV+D GK K ++FD
Sbjct: 633 FLIIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFD 692
Query: 65 VKDNIATLKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDE 124
++NI+T+ EW+S ANAKQR+GRAGRVQ G CYHLY+ R DY LPEI RT L+E
Sbjct: 693 TQNNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEE 752
Query: 125 VVRTLESKKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDD 184
+ L+ K +L Y +++DPP +V LS+K L ++ALD
Sbjct: 753 LC--LQIK-----------ILRLGGIAYFL--SRLMDPPSDEAVSLSIKHLMELNALDKQ 797
Query: 185 EHLTPLGYHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMIGK 239
E LTPLG HLA+LP++P IGKM+L ++F C+DPV T+AASL FKD F P+ GK
Sbjct: 798 EELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPL-GK 851
Score = 252 (93.8 bits), Expect = 3.4e-20, P = 3.4e-20
Identities = 49/115 (42%), Positives = 68/115 (59%)
Query: 235 PMIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQGAKSDYVVL 294
P IGKM+L ++F C+DPV T+AASL FKD F P+ EK D ++ LA+ KSD++ +
Sbjct: 814 PHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKIADARRKELAKDTKSDHLTV 873
Query: 295 INAMQGWEQALEHN--YAHDYCRENFXXXXXXXXXRDMKDQFSRTMHEMNFISSR 347
+NA +GWE+A Y DYC E F +MK QF+ + F+SSR
Sbjct: 874 VNAFEGWEEARRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSR 928
>UNIPROTKB|I3LCY3 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043330 "response to exogenous dsRNA" evidence=IEA]
[GO:0009615 "response to virus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009615
GO:GO:0003725 GO:GO:0004386 GO:GO:0043330
GeneTree:ENSGT00550000074257 EMBL:FP312685
Ensembl:ENSSSCT00000023601 Uniprot:I3LCY3
Length = 987
Score = 538 (194.4 bits), Expect = 5.5e-51, P = 5.5e-51
Identities = 118/228 (51%), Positives = 152/228 (66%)
Query: 15 SGLKHLQNKSVFEL---GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIAT 71
S L +L VF+ GVRKIV+ATNIAETSITIDD+VYV+D GK K ++FD ++NI+T
Sbjct: 497 SNLCYLNILQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNIST 556
Query: 72 LKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDEVVRTLES 131
+ EW+S ANAKQR+GRAGRVQ G CYHLY+ R DY LPEI RT L+E+ L+
Sbjct: 557 MSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELC--LQI 614
Query: 132 KKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLG 191
K +L Y +++DPP +V LS+K L ++ALD E LTPLG
Sbjct: 615 K-----------ILRLGGIAYFL--SRLMDPPSNEAVSLSIKHLMELNALDKQEELTPLG 661
Query: 192 YHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMIGK 239
HLA+LP++P IGKM+L ++F C+DPV T+AASL FKD F P+ GK
Sbjct: 662 VHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPL-GK 708
Score = 247 (92.0 bits), Expect = 5.8e-19, P = 5.8e-19
Identities = 48/115 (41%), Positives = 67/115 (58%)
Query: 235 PMIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQGAKSDYVVL 294
P IGKM+L ++F C+DPV T+AASL FKD F P+ EK D ++ LA+ KSD++ +
Sbjct: 671 PHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKVADARRKELAKDTKSDHLTV 730
Query: 295 INAMQGWEQALEHN--YAHDYCRENFXXXXXXXXXRDMKDQFSRTMHEMNFISSR 347
+NA +GWE+A Y DYC E F +MK QF+ + F+ SR
Sbjct: 731 VNAFEGWEEARRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVRSR 785
>UNIPROTKB|E2QTL7 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
Ensembl:ENSCAFT00000013769 Uniprot:E2QTL7
Length = 988
Score = 537 (194.1 bits), Expect = 7.2e-51, P = 7.2e-51
Identities = 113/211 (53%), Positives = 145/211 (68%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
GVRKIV+ATNIAETSITIDD+VYV+D GK K ++FD ++NI+T+ EW+S ANAKQR+GR
Sbjct: 523 GVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGR 582
Query: 89 AGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNTA 148
AGRVQ G CYHLY+ R DY LPEI RT L+E+ L+ K +L
Sbjct: 583 AGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELC--LQIK-----------ILRLG 629
Query: 149 FTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKMLL 208
Y +++DPP +V LS+K L ++ALD E LTPLG HLA+LP++P IGKM+L
Sbjct: 630 GIAYFL--SRLMDPPSDEAVSLSIKHLMELNALDKQEELTPLGVHLARLPVEPHIGKMIL 687
Query: 209 MASIFSCVDPVFTVAASLGFKDAFYCPMIGK 239
++F C+DPV T+AASL FKD F P+ GK
Sbjct: 688 FGALFCCLDPVLTIAASLSFKDPFVIPL-GK 717
Score = 252 (93.8 bits), Expect = 2.8e-20, P = 2.8e-20
Identities = 49/115 (42%), Positives = 68/115 (59%)
Query: 235 PMIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQGAKSDYVVL 294
P IGKM+L ++F C+DPV T+AASL FKD F P+ EK D ++ LA+ KSD++ +
Sbjct: 680 PHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKIADARRKELAKDTKSDHLTV 739
Query: 295 INAMQGWEQALEHN--YAHDYCRENFXXXXXXXXXRDMKDQFSRTMHEMNFISSR 347
+NA +GWE+A Y DYC E F +MK QF+ + F+SSR
Sbjct: 740 VNAFEGWEEARRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSR 794
>RGD|1308767 [details] [associations]
symbol:Dhx36 "DEAH (Asp-Glu-Ala-His) box polypeptide 36"
species:10116 "Rattus norvegicus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA;ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009615 "response to virus" evidence=IEA;ISO]
[GO:0043330 "response to exogenous dsRNA" evidence=IEA;ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1308767 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009615
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
GeneTree:ENSGT00550000074257 CTD:170506 KO:K14442 OMA:RIRNRSY
OrthoDB:EOG4K6G3J EMBL:CH474003 IPI:IPI00367998
RefSeq:NP_001101148.1 UniGene:Rn.2744 Ensembl:ENSRNOT00000019824
GeneID:310461 KEGG:rno:310461 UCSC:RGD:1308767 NextBio:662035
Uniprot:D4A2Z8
Length = 1000
Score = 537 (194.1 bits), Expect = 7.5e-51, P = 7.5e-51
Identities = 120/235 (51%), Positives = 154/235 (65%)
Query: 9 FLQCPSSGLKHLQNKS-VFEL---GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFD 64
FL P L N++ VF+ GVRKIV+ATNIAETSITIDD+VYV+D GK K ++FD
Sbjct: 511 FLIIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFD 570
Query: 65 VKDNIATLKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDE 124
++NI+T+ EW+S ANAKQR+GRAGRVQ G CYHLY+ R DY LPEI RT L+E
Sbjct: 571 TQNNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEE 630
Query: 125 VVRTLESKKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDD 184
+ L+ K +L Y +++DPP +V LS+K L + ALD
Sbjct: 631 LC--LQIK-----------ILRLGGIAYFL--SRLMDPPSDEAVVLSIKHLMELSALDKQ 675
Query: 185 EHLTPLGYHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMIGK 239
E LTPLG HLA+LP++P IGKM+L ++F C+DPV T+AASL FKD F P+ GK
Sbjct: 676 EELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPL-GK 729
Score = 249 (92.7 bits), Expect = 1.8e-19, P = 1.8e-19
Identities = 48/116 (41%), Positives = 69/116 (59%)
Query: 235 PMIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQGAKSDYVVL 294
P IGKM+L ++F C+DPV T+AASL FKD F P+ EK D ++ LA+ +SD++ +
Sbjct: 692 PHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKIADARRKELAKETRSDHLTV 751
Query: 295 INAMQGWEQALEHN--YAHDYCRENFXXXXXXXXXRDMKDQFSRTMHEMNFISSRT 348
+NA +GWE+A Y DYC E F +MK QF+ + F+SSR+
Sbjct: 752 VNAFEGWEEAKRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRS 807
>MGI|MGI:1919412 [details] [associations]
symbol:Dhx36 "DEAH (Asp-Glu-Ala-His) box polypeptide 36"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IDA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009615 "response to virus"
evidence=IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0043330 "response to exogenous dsRNA" evidence=IMP]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
MGI:MGI:1919412 GO:GO:0005524 GO:GO:0005634 GO:GO:0009615
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GO:GO:0043330 EMBL:CH466530 HOGENOM:HOG000247063
GeneTree:ENSGT00550000074257 CTD:170506 HOVERGEN:HBG081438
KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J EMBL:AF448804 EMBL:AC114424
EMBL:AK129373 EMBL:AK013031 IPI:IPI00351266 RefSeq:NP_082412.2
UniGene:Mm.224233 ProteinModelPortal:Q8VHK9 DIP:DIP-48576N
STRING:Q8VHK9 PhosphoSite:Q8VHK9 PaxDb:Q8VHK9 PRIDE:Q8VHK9
Ensembl:ENSMUST00000029336 GeneID:72162 KEGG:mmu:72162
UCSC:uc008pjn.2 InParanoid:Q8VHK9 ChiTaRS:DHX36 NextBio:335597
CleanEx:MM_DHX36 Genevestigator:Q8VHK9
GermOnline:ENSMUSG00000027770 Uniprot:Q8VHK9
Length = 1001
Score = 536 (193.7 bits), Expect = 9.6e-51, P = 9.6e-51
Identities = 120/235 (51%), Positives = 154/235 (65%)
Query: 9 FLQCPSSGLKHLQNKS-VFEL---GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFD 64
FL P L N++ VF+ GVRKIV+ATNIAETSITIDD+VYV+D GK K ++FD
Sbjct: 512 FLIIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFD 571
Query: 65 VKDNIATLKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDE 124
++NI+T+ EW+S ANAKQR+GRAGRVQ G CYHLY+ R DY LPEI RT L+E
Sbjct: 572 TQNNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEE 631
Query: 125 VVRTLESKKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDD 184
+ L+ K +L Y +++DPP +V LS+K L + ALD
Sbjct: 632 LC--LQIK-----------ILRLGGIAYFL--SRLMDPPSNEAVVLSIKHLMELSALDKQ 676
Query: 185 EHLTPLGYHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMIGK 239
E LTPLG HLA+LP++P IGKM+L ++F C+DPV T+AASL FKD F P+ GK
Sbjct: 677 EELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPL-GK 730
Score = 249 (92.7 bits), Expect = 1.8e-19, P = 1.8e-19
Identities = 48/116 (41%), Positives = 69/116 (59%)
Query: 235 PMIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQGAKSDYVVL 294
P IGKM+L ++F C+DPV T+AASL FKD F P+ EK D ++ LA+ +SD++ +
Sbjct: 693 PHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKIADARRKELAKETRSDHLTV 752
Query: 295 INAMQGWEQALEHN--YAHDYCRENFXXXXXXXXXRDMKDQFSRTMHEMNFISSRT 348
+NA +GWE+A Y DYC E F +MK QF+ + F+SSR+
Sbjct: 753 VNAFEGWEEAKRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRS 808
>UNIPROTKB|Q05B79 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043330 "response to exogenous dsRNA" evidence=IEA]
[GO:0009615 "response to virus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0009615 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0043330 HOGENOM:HOG000247063
GeneTree:ENSGT00550000074257 CTD:170506 HOVERGEN:HBG081438
KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J EMBL:DAAA02002574
EMBL:DAAA02002573 EMBL:BC122652 IPI:IPI00686397
RefSeq:NP_001073720.1 UniGene:Bt.103344 Ensembl:ENSBTAT00000008082
GeneID:509583 KEGG:bta:509583 InParanoid:Q05B79 NextBio:20869030
Uniprot:Q05B79
Length = 1010
Score = 535 (193.4 bits), Expect = 1.3e-50, P = 1.3e-50
Identities = 116/235 (49%), Positives = 155/235 (65%)
Query: 9 FLQCPSSGLKHLQNKS-VFEL---GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFD 64
F+ P L N++ VF+ GVRKIV+ATNIAETSITIDD+VYV+D GK K ++FD
Sbjct: 521 FIIIPLHSLMPTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFD 580
Query: 65 VKDNIATLKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDE 124
++NI+T+ EW+S ANAKQR+GRAGRVQ G CYHLY+ R DY LPEI RT L+E
Sbjct: 581 TQNNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNSLRASLLDDYQLPEILRTPLEE 640
Query: 125 VVRTLESKKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDD 184
+ + K++ ++ +++DPP +V LS+K L ++ALD
Sbjct: 641 LCLQI------------KILRLGGIAHFL---SRLMDPPSNEAVLLSIKHLMELNALDKQ 685
Query: 185 EHLTPLGYHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMIGK 239
E LTPLG HLA+LP++P IGKM+L ++F C+DPV T+AASL FKD F P+ GK
Sbjct: 686 EELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPL-GK 739
Score = 252 (93.8 bits), Expect = 2.9e-20, P = 2.9e-20
Identities = 49/115 (42%), Positives = 69/115 (60%)
Query: 235 PMIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQGAKSDYVVL 294
P IGKM+L ++F C+DPV T+AASL FKD F P+ EK D ++ LA+ KSD++ +
Sbjct: 702 PHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKVADARRKELAKDTKSDHLTV 761
Query: 295 INAMQGWEQALEHN--YAHDYCRENFXXXXXXXXXRDMKDQFSRTMHEMNFISSR 347
+NA +GWE+A + Y DYC E F +MK QF+ + F+SSR
Sbjct: 762 VNAFKGWEKAKQRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSR 816
>UNIPROTKB|Q9H2U1 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:CH471052 GO:GO:0009615 GO:GO:0003725 EMBL:AC018452
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
HOGENOM:HOG000247063 EMBL:AF217190 EMBL:AJ577133 EMBL:AJ577134
EMBL:AK314435 EMBL:AC134026 EMBL:BC036035 EMBL:AB040921
IPI:IPI00027415 IPI:IPI00217760 IPI:IPI00784170 PIR:D56236
RefSeq:NP_001107869.1 RefSeq:NP_065916.2 UniGene:Hs.446270
ProteinModelPortal:Q9H2U1 SMR:Q9H2U1 IntAct:Q9H2U1
MINT:MINT-3066797 STRING:Q9H2U1 PhosphoSite:Q9H2U1 DMDM:74762733
PaxDb:Q9H2U1 PRIDE:Q9H2U1 DNASU:170506 Ensembl:ENST00000308361
Ensembl:ENST00000329463 Ensembl:ENST00000496811 GeneID:170506
KEGG:hsa:170506 UCSC:uc003ezy.4 UCSC:uc003ezz.4 UCSC:uc010hvq.3
CTD:170506 GeneCards:GC03M153990 HGNC:HGNC:14410 HPA:HPA035399
MIM:612767 neXtProt:NX_Q9H2U1 PharmGKB:PA27223 HOVERGEN:HBG081438
InParanoid:Q9H2U1 KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J
PhylomeDB:Q9H2U1 GenomeRNAi:170506 NextBio:88959
ArrayExpress:Q9H2U1 Bgee:Q9H2U1 CleanEx:HS_DHX36
Genevestigator:Q9H2U1 GermOnline:ENSG00000174953 Uniprot:Q9H2U1
Length = 1008
Score = 534 (193.0 bits), Expect = 1.6e-50, P = 1.6e-50
Identities = 119/235 (50%), Positives = 155/235 (65%)
Query: 9 FLQCPSSGLKHLQNKS-VFEL---GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFD 64
FL P L N++ VF+ GVRKIV+ATNIAETSITIDD+VYV+D GK K ++FD
Sbjct: 519 FLIIPLHSLMPTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFD 578
Query: 65 VKDNIATLKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDE 124
++NI+T+ EW+S ANAKQR+GRAGRVQ G CYHLY+ R DY LPEI RT L+E
Sbjct: 579 TQNNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEE 638
Query: 125 VVRTLESKKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDD 184
+ L+ K +L Y +++DPP +V LS++ L ++ALD
Sbjct: 639 LC--LQIK-----------ILRLGGIAYFL--SRLMDPPSNEAVLLSIRHLMELNALDKQ 683
Query: 185 EHLTPLGYHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMIGK 239
E LTPLG HLA+LP++P IGKM+L ++F C+DPV T+AASL FKD F P+ GK
Sbjct: 684 EELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPL-GK 737
Score = 249 (92.7 bits), Expect = 1.8e-19, P = 1.8e-19
Identities = 48/115 (41%), Positives = 68/115 (59%)
Query: 235 PMIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQGAKSDYVVL 294
P IGKM+L ++F C+DPV T+AASL FKD F P+ EK D ++ LA+ +SD++ +
Sbjct: 700 PHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKIADARRKELAKDTRSDHLTV 759
Query: 295 INAMQGWEQALEHN--YAHDYCRENFXXXXXXXXXRDMKDQFSRTMHEMNFISSR 347
+NA +GWE+A Y DYC E F +MK QF+ + F+SSR
Sbjct: 760 VNAFEGWEEARRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSR 814
>UNIPROTKB|H7C5F5 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
GO:GO:0004386 EMBL:AC018452 EMBL:AC134026 HGNC:HGNC:14410
ProteinModelPortal:H7C5F5 Ensembl:ENST00000469977 Uniprot:H7C5F5
Length = 188
Score = 337 (123.7 bits), Expect = 2.3e-50, Sum P(2) = 2.3e-50
Identities = 64/97 (65%), Positives = 78/97 (80%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
GVRKIV+ATNIAETSITIDD+VYV+D GK K ++FD ++NI+T+ EW+S ANAKQR+GR
Sbjct: 23 GVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGR 82
Query: 89 AGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDEV 125
AGRVQ G CYHLY+ R DY LPEI RT L+E+
Sbjct: 83 AGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEEL 119
Score = 204 (76.9 bits), Expect = 2.3e-50, Sum P(2) = 2.3e-50
Identities = 40/77 (51%), Positives = 53/77 (68%)
Query: 163 PDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKMLLMASIFSCVDPVFTV 222
P+ L L++ +ALD E LTPLG HLA+LP++P IGKM+L ++F C+DPV T+
Sbjct: 109 PEILRTPLEELCLQIKNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTI 168
Query: 223 AASLGFKDAFYCPMIGK 239
AASL FKD F P+ GK
Sbjct: 169 AASLSFKDPFVIPL-GK 184
Score = 128 (50.1 bits), Expect = 2.2e-42, Sum P(2) = 2.2e-42
Identities = 23/40 (57%), Positives = 29/40 (72%)
Query: 235 PMIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEK 274
P IGKM+L ++F C+DPV T+AASL FKD F P+ EK
Sbjct: 147 PHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEK 186
>UNIPROTKB|F5GZS0 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0003676
EMBL:AC018452 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AC134026
HGNC:HGNC:14410 IPI:IPI00922725 ProteinModelPortal:F5GZS0
SMR:F5GZS0 PRIDE:F5GZS0 Ensembl:ENST00000544526 ArrayExpress:F5GZS0
Bgee:F5GZS0 Uniprot:F5GZS0
Length = 994
Score = 531 (192.0 bits), Expect = 3.3e-50, P = 3.3e-50
Identities = 112/211 (53%), Positives = 145/211 (68%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
GVRKIV+ATNIAETSITIDD+VYV+D GK K ++FD ++NI+T+ EW+S ANAKQR+GR
Sbjct: 529 GVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGR 588
Query: 89 AGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNTA 148
AGRVQ G CYHLY+ R DY LPEI RT L+E+ L+ K +L
Sbjct: 589 AGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELC--LQIK-----------ILRLG 635
Query: 149 FTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKMLL 208
Y +++DPP +V LS++ L ++ALD E LTPLG HLA+LP++P IGKM+L
Sbjct: 636 GIAYFL--SRLMDPPSNEAVLLSIRHLMELNALDKQEELTPLGVHLARLPVEPHIGKMIL 693
Query: 209 MASIFSCVDPVFTVAASLGFKDAFYCPMIGK 239
++F C+DPV T+AASL FKD F P+ GK
Sbjct: 694 FGALFCCLDPVLTIAASLSFKDPFVIPL-GK 723
Score = 249 (92.7 bits), Expect = 1.8e-19, P = 1.8e-19
Identities = 48/115 (41%), Positives = 68/115 (59%)
Query: 235 PMIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQGAKSDYVVL 294
P IGKM+L ++F C+DPV T+AASL FKD F P+ EK D ++ LA+ +SD++ +
Sbjct: 686 PHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKIADARRKELAKDTRSDHLTV 745
Query: 295 INAMQGWEQALEHN--YAHDYCRENFXXXXXXXXXRDMKDQFSRTMHEMNFISSR 347
+NA +GWE+A Y DYC E F +MK QF+ + F+SSR
Sbjct: 746 VNAFEGWEEARRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSR 800
>UNIPROTKB|E1C550 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003725 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0043330 GeneTree:ENSGT00550000074257
OMA:GRIAYND EMBL:AADN02021100 IPI:IPI00601151
Ensembl:ENSGALT00000016841 Uniprot:E1C550
Length = 985
Score = 524 (189.5 bits), Expect = 1.8e-49, P = 1.8e-49
Identities = 115/235 (48%), Positives = 155/235 (65%)
Query: 9 FLQCPSSGLKHLQNKS-VFEL---GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFD 64
F+ P L N++ VF+ GVRKIV+ATNIAETSITIDD+V+V+D GK K ++FD
Sbjct: 500 FIIIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVFVIDGGKIKETHFD 559
Query: 65 VKDNIATLKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDE 124
++NI+T+ EW+S ANAKQR+GRAGRVQ G CYHLY+ R DY LPEI RT L+E
Sbjct: 560 TQNNISTMAAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEE 619
Query: 125 VVRTLESKKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDD 184
+ L+ K K+ + + +++DPP +V L++ L ++ALD
Sbjct: 620 LC--LQIKILKLGGIAYFL-------------SKLMDPPSRDAVMLAINHLMELNALDRQ 664
Query: 185 EHLTPLGYHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMIGK 239
E LTPLG HLA+LP++P IGKM+L ++F C+DPV T+AASL FKD F P+ GK
Sbjct: 665 EELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPL-GK 718
Score = 235 (87.8 bits), Expect = 4.1e-17, P = 4.1e-17
Identities = 45/115 (39%), Positives = 66/115 (57%)
Query: 235 PMIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQGAKSDYVVL 294
P IGKM+L ++F C+DPV T+AASL FKD F P+ EK D ++ L++ KSD++ +
Sbjct: 681 PHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKVADARRKELSKNTKSDHLTV 740
Query: 295 INAMQGWEQALEHNYA--HDYCRENFXXXXXXXXXRDMKDQFSRTMHEMNFISSR 347
+NA GWE+ + DYC E F +MK QF+ + F++SR
Sbjct: 741 VNAFTGWEETRRRGFRTEKDYCWEYFLSPNTLQMLHNMKGQFAEHLLAAGFVNSR 795
>FB|FBgn0032883 [details] [associations]
symbol:CG9323 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0002151 "G-quadruplex RNA binding"
evidence=IDA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:AE014134 GO:GO:0002151
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GeneTree:ENSGT00550000074257 KO:K14442 EMBL:AY095176
RefSeq:NP_610056.1 UniGene:Dm.11353 SMR:Q8SWT2 MINT:MINT-935813
EnsemblMetazoa:FBtr0081459 GeneID:35339 KEGG:dme:Dmel_CG9323
UCSC:CG9323-RA FlyBase:FBgn0032883 InParanoid:Q8SWT2 OMA:PLGMHLA
OrthoDB:EOG4HQC07 GenomeRNAi:35339 NextBio:793041 Uniprot:Q8SWT2
Length = 942
Score = 510 (184.6 bits), Expect = 5.0e-48, P = 5.0e-48
Identities = 97/211 (45%), Positives = 153/211 (72%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
G RK++++T IAETS+TIDD+VYV++ G+TK +N+D++ NI +L W++ AN +QRRGR
Sbjct: 481 GQRKVIISTIIAETSVTIDDVVYVINSGRTKATNYDIETNIQSLDEVWVTKANTQQRRGR 540
Query: 89 AGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNTA 148
AGRV+ G+CY+L+SRARE D P PEI R++L+ ++ +L+ +L+
Sbjct: 541 AGRVRPGICYNLFSRAREDRMDDIPTPEILRSKLESIILSLK-------------LLHID 587
Query: 149 FTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKMLL 208
PY ++ + +++ P+P ++++ ++LL+ I+ALD LTPLG HLAKLP+DPQ+GKM+L
Sbjct: 588 -DPYRFL-QTLINAPNPEAIKMGVELLKRIEALDQTGTLTPLGMHLAKLPIDPQMGKMIL 645
Query: 209 MASIFSCVDPVFTVAASLGFKDAFYCPMIGK 239
M+++F C+DP+ + AA+L FK FY P+ GK
Sbjct: 646 MSALFCCLDPITSAAAALSFKSPFYSPL-GK 675
Score = 208 (78.3 bits), Expect = 7.8e-14, P = 7.8e-14
Identities = 56/183 (30%), Positives = 93/183 (50%)
Query: 167 SVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKM-LLMASIFSCVDPVFTVAAS 225
S+ LSLKLL + DD L P +P+ KM + + +D T+
Sbjct: 576 SIILSLKLLHI----DDPYRFLQT---LINAP-NPEAIKMGVELLKRIEALDQTGTLTP- 626
Query: 226 LGFKDAFYC--PMIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNIL 283
LG A P +GKM+LM+++F C+DP+ + AA+L FK FY P+ E VD+ K +
Sbjct: 627 LGMHLAKLPIDPQMGKMILMSALFCCLDPITSAAAALSFKSPFYSPLGKESRVDEIKRRM 686
Query: 284 AQGAKSDYVVLINAMQGWEQALEHNYAHDYCRENFXXXXXXXXXRDMKDQFSRTMHEMNF 343
A+ +SD++++ N + + + + D+C +NF MK+QFS ++ F
Sbjct: 687 ARNMRSDHLMVHNTIIAYRDSRYSHAERDFCYKNFLSSMTLQQLERMKNQFSELLYNYKF 746
Query: 344 ISS 346
++S
Sbjct: 747 LAS 749
>TAIR|locus:2008144 [details] [associations]
symbol:AT1G48650 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
EMBL:CP002684 GO:GO:0005524 Gene3D:3.30.160.20 GO:GO:0005622
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K14442
IPI:IPI00938568 RefSeq:NP_001154411.1 UniGene:At.22775
ProteinModelPortal:F4HYJ6 SMR:F4HYJ6 PRIDE:F4HYJ6
EnsemblPlants:AT1G48650.2 GeneID:841287 KEGG:ath:AT1G48650
OMA:GRIAYND Uniprot:F4HYJ6
Length = 1206
Score = 506 (183.2 bits), Expect = 2.8e-47, P = 2.8e-47
Identities = 118/268 (44%), Positives = 163/268 (60%)
Query: 6 QIWFLQCPSSGLKHLQNKSVFEL---GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSN 62
++ L C S + + + +F+ G+RKIVLATN+AETSITI+D+VYV+DCGK K ++
Sbjct: 609 KVLLLACHGS-MASSEQRLIFDRPPEGIRKIVLATNMAETSITINDVVYVIDCGKAKETS 667
Query: 63 FDVKDNIATLKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRL 122
+D +N L P WIS A A+QRRGRAGRV G CYHLY R + F DY PE+ RT L
Sbjct: 668 YDALNNTPCLLPSWISKAAARQRRGRAGRVMPGECYHLYPRCVYEAFADYQQPELLRTPL 727
Query: 123 DEVVRTLESKKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALD 182
+ ++S +S L+ A L PP+ SVQ +++ L++I ALD
Sbjct: 728 QSLCLQIKSLGLGSISE----FLSRA-----------LQPPEALSVQNAVEYLKIIGALD 772
Query: 183 DDEHLTPLGYHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMIGKMLL 242
DDE+LTPLG +L+ LP++P++GKML++ +IF+C+DPV TV A L +D F P K L
Sbjct: 773 DDENLTPLGKNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLA 832
Query: 243 MA--SIFS---CVDPVFTVAASLGFKDA 265
S FS D + V A G+KDA
Sbjct: 833 ETARSKFSGRDYSDHLTLVRAYNGWKDA 860
Score = 187 (70.9 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 38/113 (33%), Positives = 60/113 (53%)
Query: 235 PMIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQGAK-SDYVV 293
P +GKML++ +IF+C+DPV TV A L +D F P + +KD+ + G SD++
Sbjct: 791 PKLGKMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFD-KKDLAETARSKFSGRDYSDHLT 849
Query: 294 LINAMQGWEQALEHNYAHDYCRENFXXXXXXXXXRDMKDQFSRTMHEMNFISS 346
L+ A GW+ A + +DYC +NF M+ QF + E + I +
Sbjct: 850 LVRAYNGWKDAERTHSGYDYCWKNFLSSQTLKAMDSMRKQFFNLLKEASLIDN 902
>TAIR|locus:2039280 [details] [associations]
symbol:AT2G35920 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006499
"N-terminal protein myristoylation" evidence=RCA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CP002685 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K14442 OMA:RIRNRSY IPI:IPI00520060
RefSeq:NP_850255.1 UniGene:At.27892 ProteinModelPortal:F4ILR7
SMR:F4ILR7 PRIDE:F4ILR7 EnsemblPlants:AT2G35920.1 GeneID:818165
KEGG:ath:AT2G35920 Uniprot:F4ILR7
Length = 995
Score = 500 (181.1 bits), Expect = 7.3e-47, P = 7.3e-47
Identities = 117/266 (43%), Positives = 159/266 (59%)
Query: 9 FLQCPSSG-LKHLQNKSVFEL---GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFD 64
FL P G + + + +F+ RKIVLATNIAE+SITIDD+VYVVDCGK K +++D
Sbjct: 535 FLVLPLHGSMPTVNQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYD 594
Query: 65 VKDNIATLKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDE 124
+ +A L P WIS A+A QRRGRAGRVQ GVCY LY + F Y LPEI RT L E
Sbjct: 595 ALNKVACLLPSWISKASAHQRRGRAGRVQAGVCYRLYPKVIYDAFPQYQLPEIIRTPLQE 654
Query: 125 VVRTLESKKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDD 184
+ ++S + + +F + L PPD +V+ +++LL+ I AL+D
Sbjct: 655 LCLHIKSLQVGSIG---------SFLA------KALQPPDALAVENAIELLKTIGALNDV 699
Query: 185 EHLTPLGYHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMIGKMLLMA 244
E LTPLG HL LP+DP IGKMLL+ +IF CV+P T+AA+L ++ F P+ K
Sbjct: 700 EELTPLGRHLCTLPVDPNIGKMLLIGAIFQCVNPALTIAAALAYRSPFVLPLNRKEEADE 759
Query: 245 S--IF---SCVDPVFTVAASLGFKDA 265
+ F SC D + + A G++DA
Sbjct: 760 AKRYFAGDSCSDHIALLKAYEGYRDA 785
Score = 206 (77.6 bits), Expect = 6.9e-15, Sum P(2) = 6.9e-15
Identities = 37/110 (33%), Positives = 63/110 (57%)
Query: 235 PMIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQGAKSDYVVL 294
P IGKMLL+ +IF CV+P T+AA+L ++ F P+N +++ D+ K A + SD++ L
Sbjct: 716 PNIGKMLLIGAIFQCVNPALTIAAALAYRSPFVLPLNRKEEADEAKRYFAGDSCSDHIAL 775
Query: 295 INAMQGWEQALEHNYAHDYCRENFXXXXXXXXXRDMKDQFSRTMHEMNFI 344
+ A +G+ A D+C +NF DM++QF + ++ F+
Sbjct: 776 LKAYEGYRDAKRGGNEKDFCWQNFLSPVTLRMMEDMRNQFLDLLSDIGFV 825
Score = 55 (24.4 bits), Expect = 6.9e-15, Sum P(2) = 6.9e-15
Identities = 17/59 (28%), Positives = 29/59 (49%)
Query: 92 VQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDEVVRTLESKKFKM---VSRRFKVMLNT 147
+Q G+ +H Y++ + PLP+ R LDE + + K+ KM R+ +L T
Sbjct: 101 LQMGLYFHAYNKGKALVVSKVPLPDY-RADLDERHGSTQ-KEIKMSTETERKLGSLLKT 157
Score = 37 (18.1 bits), Expect = 5.1e-13, Sum P(2) = 5.1e-13
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 83 KQRRGRAGRVQEGVCYHLYSRAREQTFQDYPL 114
K + + G QE + +SR +QT D L
Sbjct: 70 KIEQWKTGGEQEMLIKRNFSRGDQQTLSDMAL 101
>TAIR|locus:2196255 [details] [associations]
symbol:AT1G58050 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AC079604
IPI:IPI00531251 PIR:F96613 RefSeq:NP_176102.1 UniGene:At.52250
ProteinModelPortal:Q9C6G0 SMR:Q9C6G0 PaxDb:Q9C6G0 PRIDE:Q9C6G0
EnsemblPlants:AT1G58050.1 GeneID:842172 KEGG:ath:AT1G58050
TAIR:At1g58050 HOGENOM:HOG000240812 InParanoid:Q9C6G0 OMA:ISPENED
PhylomeDB:Q9C6G0 ProtClustDB:CLSN2679369 Genevestigator:Q9C6G0
Uniprot:Q9C6G0
Length = 1417
Score = 415 (151.1 bits), Expect = 1.8e-45, Sum P(2) = 1.8e-45
Identities = 94/223 (42%), Positives = 138/223 (61%)
Query: 8 WFLQCPSSGLKHLQNKSVF---ELGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFD 64
W L SS + + K VF G+RK+++ATNIAETSITI+D+VYV+D GK K + ++
Sbjct: 915 WLLPLHSS-IASTEQKKVFLRPPKGIRKVIIATNIAETSITIEDVVYVIDSGKHKENRYN 973
Query: 65 VKDNIATLKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAR-EQTFQDYPLPEIQRTRLD 123
++++ +W+S ANA+QR GRAGRV+ G C+ LY+R R E+ + Y +PE+ R L
Sbjct: 974 PHKKLSSMVEDWVSKANARQRMGRAGRVKPGHCFSLYTRHRFEKLMRPYQVPEMLRVPLV 1033
Query: 124 EVVRTLESKKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDD 183
E+ L K + + K L+ A L+PP +++ ++ LL + AL+
Sbjct: 1034 ELC--LHIKLLGL--GQIKPFLSKA-----------LEPPSESAINSAILLLHKVGALEG 1078
Query: 184 DEHLTPLGYHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASL 226
DE LTPLG+HLAKLP+D IGKMLL IF C+ P+ ++AA L
Sbjct: 1079 DEELTPLGHHLAKLPVDLLIGKMLLYGGIFGCLSPILSIAAFL 1121
Score = 106 (42.4 bits), Expect = 1.8e-45, Sum P(2) = 1.8e-45
Identities = 30/125 (24%), Positives = 58/125 (46%)
Query: 236 MIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQK------------NIL 283
+IGKMLL IF C+ P+ ++AA L + + E++VD+ K N+
Sbjct: 1097 LIGKMLLYGGIFGCLSPILSIAAFLSCCKSPFVYAKDEQNVDRVKLALLSDKLESSSNLN 1156
Query: 284 AQGAKSDYVVLINAMQGWEQAL-EHNY--AHDYCRENFXXXXXXXXXRDMKDQFSRTMHE 340
+SD+++++ A + W + L E + A +C F R+ + +F + +
Sbjct: 1157 NNDRQSDHLLMVVAYEKWVRILHEQGFKAAESFCESKFLNSSVMRMMRERRVEFGMLLAD 1216
Query: 341 MNFIS 345
+ I+
Sbjct: 1217 IGLIN 1221
>UNIPROTKB|F1P1F4 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9031 "Gallus gallus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0042645
"mitochondrial nucleoid" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0042645
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 IPI:IPI00593383 OMA:LHKEERY EMBL:AADN02000053
Ensembl:ENSGALT00000008045 Uniprot:F1P1F4
Length = 1231
Score = 372 (136.0 bits), Expect = 4.4e-45, Sum P(2) = 4.4e-45
Identities = 91/228 (39%), Positives = 134/228 (58%)
Query: 9 FLQCP-SSGLKHLQNKSVFEL---GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFD 64
+L P S + + +++F+ GVRKIVLATNIAETSITI+DIV+VVD G K +D
Sbjct: 742 YLVLPVHSNIPMMDQQNIFQRPPPGVRKIVLATNIAETSITINDIVHVVDSGTHKEERYD 801
Query: 65 VKDNIATLKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDE 124
+K ++ L+ W+S +N QRRGRAGR Q G YHL+ R+R Y +PEI RT L+
Sbjct: 802 LKTKVSCLETVWVSKSNVVQRRGRAGRCQSGFAYHLFPRSRLDKMPTYQVPEILRTPLEN 861
Query: 125 VVRTLESKKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDD 184
+V +++K M + L+ A LD PD +V ++ LL+ I LD
Sbjct: 862 LV--VQAK-IHMPEKTAVEFLSKA-----------LDSPDIKAVDEAVILLQEIGVLDQR 907
Query: 185 EHLTPLGYHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAF 232
E LT LG LA++ DP++ K +++ASI+ C+ P+ + + L +D F
Sbjct: 908 EALTTLGKRLAQISTDPRLAKAIVLASIYRCLHPLLVIVSCLT-RDPF 954
Score = 144 (55.7 bits), Expect = 4.4e-45, Sum P(2) = 4.4e-45
Identities = 31/115 (26%), Positives = 60/115 (52%)
Query: 235 PMIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQGAKSDYVVL 294
P + K +++ASI+ C+ P+ + + L +D F + +VDK K +L++ + SD++
Sbjct: 924 PRLAKAIVLASIYRCLHPLLVIVSCLT-RDPFSSSLQNRAEVDKAKAVLSRESGSDHLAF 982
Query: 295 INAMQGWEQALEH--NYAHD-YCRENFXXXXXXXXXRDMKDQFSRTMHEMNFISS 346
+ A+ GWE+ L + A D Y ++ + + QFS ++E +SS
Sbjct: 983 VRAVAGWEEVLRRRDSRARDNYLQDYYLYGPSLRFINGLVKQFSENLYEAFLVSS 1037
>UNIPROTKB|Q5ZI74 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9031 "Gallus gallus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=ISS] [GO:0042645
"mitochondrial nucleoid" evidence=ISS] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003682
GO:GO:0042645 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OrthoDB:EOG4VHK5M EMBL:AJ720910 IPI:IPI00593383
RefSeq:NP_001012869.1 UniGene:Gga.2762 ProteinModelPortal:Q5ZI74
SMR:Q5ZI74 GeneID:420376 KEGG:gga:420376 InParanoid:Q5ZI74
NextBio:20823291 Uniprot:Q5ZI74
Length = 1231
Score = 372 (136.0 bits), Expect = 4.4e-45, Sum P(2) = 4.4e-45
Identities = 91/228 (39%), Positives = 134/228 (58%)
Query: 9 FLQCP-SSGLKHLQNKSVFEL---GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFD 64
+L P S + + +++F+ GVRKIVLATNIAETSITI+DIV+VVD G K +D
Sbjct: 742 YLVLPVHSNIPMMDQQNIFQRPPPGVRKIVLATNIAETSITINDIVHVVDSGTHKEERYD 801
Query: 65 VKDNIATLKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDE 124
+K ++ L+ W+S +N QRRGRAGR Q G YHL+ R+R Y +PEI RT L+
Sbjct: 802 LKTKVSCLETVWVSKSNVVQRRGRAGRCQSGFAYHLFPRSRLDKMPTYQVPEILRTPLEN 861
Query: 125 VVRTLESKKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDD 184
+V +++K M + L+ A LD PD +V ++ LL+ I LD
Sbjct: 862 LV--VQAK-IHMPEKTAVEFLSKA-----------LDSPDIKAVDEAVILLQEIGVLDQR 907
Query: 185 EHLTPLGYHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAF 232
E LT LG LA++ DP++ K +++ASI+ C+ P+ + + L +D F
Sbjct: 908 EALTTLGKRLAQISTDPRLAKAIVLASIYRCLHPLLVIVSCLT-RDPF 954
Score = 144 (55.7 bits), Expect = 4.4e-45, Sum P(2) = 4.4e-45
Identities = 31/115 (26%), Positives = 60/115 (52%)
Query: 235 PMIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQGAKSDYVVL 294
P + K +++ASI+ C+ P+ + + L +D F + +VDK K +L++ + SD++
Sbjct: 924 PRLAKAIVLASIYRCLHPLLVIVSCLT-RDPFSSSLQNRAEVDKAKAVLSRESGSDHLAF 982
Query: 295 INAMQGWEQALEH--NYAHD-YCRENFXXXXXXXXXRDMKDQFSRTMHEMNFISS 346
+ A+ GWE+ L + A D Y ++ + + QFS ++E +SS
Sbjct: 983 VRAVAGWEEVLRRRDSRARDNYLQDYYLYGPSLRFINGLVKQFSENLYEAFLVSS 1037
>TAIR|locus:2038796 [details] [associations]
symbol:AT2G01130 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00358
SMART:SM00490 SMART:SM00847 InterPro:IPR014720 GO:GO:0005524
EMBL:CP002685 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K14442 IPI:IPI00528464
RefSeq:NP_178223.2 UniGene:At.42514 ProteinModelPortal:F4IM84
SMR:F4IM84 PRIDE:F4IM84 EnsemblPlants:AT2G01130.1 GeneID:814642
KEGG:ath:AT2G01130 OMA:PSWISKV Uniprot:F4IM84
Length = 1113
Score = 478 (173.3 bits), Expect = 2.3e-44, P = 2.3e-44
Identities = 113/266 (42%), Positives = 159/266 (59%)
Query: 7 IWFLQCPSSGLKHLQNKSVFE---LGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNF 63
+ L C S ++ + + +FE GVRKIVLATNIAETSITI+D+ +V+DCGK K +++
Sbjct: 530 VMLLACHGS-METFEQRLIFEEPASGVRKIVLATNIAETSITINDVAFVIDCGKAKETSY 588
Query: 64 DVKDNIATLKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLD 123
D +N L P WIS +A+QRRGRAGRV+ G CYHLY + F +Y LPEI RT L
Sbjct: 589 DALNNTPCLLPSWISKVSAQQRRGRAGRVRPGQCYHLYPKCVYDAFAEYQLPEILRTPLH 648
Query: 124 EVVRTLESKKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDD 183
+ ++S +S L+ A L P+ +VQ ++ L++I ALD+
Sbjct: 649 SLCLQIKSLNLGSISE----FLSRA-----------LQSPELLAVQKAIAFLKIIGALDE 693
Query: 184 DEHLTPLGYHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMIGKMLLM 243
+E LT LG +L+KLP++P++GKML++ +I C+DP+ TVAA L +D F P K L
Sbjct: 694 NEDLTTLGRYLSKLPMEPKLGKMLILGAILGCLDPILTVAAGLSVRDPFLTPQDKKDLAE 753
Query: 244 A--SIFSC--VDPVFTVAASLGFKDA 265
A S FS D + V A G+K A
Sbjct: 754 AAKSQFSRDHSDHLALVRAYEGWKKA 779
Score = 180 (68.4 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 34/110 (30%), Positives = 59/110 (53%)
Query: 235 PMIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQGAKSDYVVL 294
P +GKML++ +I C+DP+ TVAA L +D F P + +KD+ + SD++ L
Sbjct: 711 PKLGKMLILGAILGCLDPILTVAAGLSVRDPFLTPQD-KKDLAEAAKSQFSRDHSDHLAL 769
Query: 295 INAMQGWEQALEHNYAHDYCRENFXXXXXXXXXRDMKDQFSRTMHEMNFI 344
+ A +GW++A E + +DYC +NF ++ +F + + I
Sbjct: 770 VRAYEGWKKAEEESAVYDYCWKNFLSIQSLRAIDSLRKEFFSLLKDTGLI 819
Score = 52 (23.4 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 22/94 (23%), Positives = 41/94 (43%)
Query: 6 QIWFLQCPSSGLKHLQNKSVFELGVRKIVLATNIAETSITIDDIVYVVDCGKT-KMSNFD 64
Q W Q G + L +++ ++ + T I++ + + I CGKT ++ F
Sbjct: 202 QYW--QASVEGQRMLDSRTSLPAFKQRHSVLTAISQNQVIV--ISGETGCGKTTQIPQFI 257
Query: 65 VKDNIATLKPEWISLANAKQRRGRAGRVQEGVCY 98
++ I + + S+ + RR A V E V Y
Sbjct: 258 LESEIEANRGAFSSIICTQPRRISAMSVSERVAY 291
>TAIR|locus:504954904 [details] [associations]
symbol:ABO6 "ABA overly sensitive 6" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA;ISS] [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA;ISS]
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00358
SMART:SM00490 SMART:SM00847 InterPro:IPR014720 GO:GO:0005524
EMBL:CP002688 GenomeReviews:BA000015_GR Gene3D:3.30.160.20
GO:GO:0005622 GO:GO:0003725 EMBL:AB005245 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 EMBL:AB008271 HOGENOM:HOG000247063
KO:K14442 EMBL:AB025625 IPI:IPI00533344 RefSeq:NP_680142.2
UniGene:At.45659 ProteinModelPortal:Q9FF84 SMR:Q9FF84 PaxDb:Q9FF84
PRIDE:Q9FF84 EnsemblPlants:AT5G04895.1 GeneID:830371
KEGG:ath:AT5G04895 TAIR:At5g04895 InParanoid:Q9FF84 OMA:MRAGHSP
PhylomeDB:Q9FF84 ProtClustDB:CLSN2680421 Genevestigator:Q9FF84
Uniprot:Q9FF84
Length = 1161
Score = 460 (167.0 bits), Expect = 2.1e-42, P = 2.1e-42
Identities = 109/268 (40%), Positives = 159/268 (59%)
Query: 6 QIWFLQCPSSGLKHLQNKSVFELG---VRKIVLATNIAETSITIDDIVYVVDCGKTKMSN 62
++ L C S + + + +FE +RKIVLATN+AE SITI+D+V+VVDCGK K +
Sbjct: 570 RVLLLMCHGS-MATAEQRLIFERAPPNIRKIVLATNMAEASITINDVVFVVDCGKAKETT 628
Query: 63 FDVKDNIATLKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRL 122
+D +N L P WIS A+A+QRRGRAGR+ G CYHLY + F +Y LPE+ RT L
Sbjct: 629 YDALNNTPCLLPSWISQASARQRRGRAGRLFPGECYHLYPKCVYDAFAEYQLPELLRTPL 688
Query: 123 DEVVRTLESKKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALD 182
+ + ++S + + ++ L+ A L P+ +VQ ++ L++I ALD
Sbjct: 689 NSLCLQIKSLQVESIAE----FLSAA-----------LQAPESLAVQNAIGFLKMIGALD 733
Query: 183 DDEHLTPLGYHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMIGKML- 241
+ E+LT LG L+ LP+DP++GKML+M +IF C DP+ T+ + L +D F P K L
Sbjct: 734 EKENLTDLGKLLSILPVDPKLGKMLIMGAIFRCFDPILTIVSGLSVRDPFLLPQDKKDLA 793
Query: 242 LMASI-FSCVD---PVFTVAASLGFKDA 265
L A + FS D + V A G+KDA
Sbjct: 794 LSAKLRFSAKDYSDHMALVRAFEGWKDA 821
Score = 175 (66.7 bits), Expect = 6.0e-10, P = 6.0e-10
Identities = 35/112 (31%), Positives = 58/112 (51%)
Query: 235 PMIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQGAK--SDYV 292
P +GKML+M +IF C DP+ T+ + L +D F P + +KD+ L AK SD++
Sbjct: 752 PKLGKMLIMGAIFRCFDPILTIVSGLSVRDPFLLPQD-KKDLALSAK-LRFSAKDYSDHM 809
Query: 293 VLINAMQGWEQALEHNYAHDYCRENFXXXXXXXXXRDMKDQFSRTMHEMNFI 344
L+ A +GW+ A A+++C NF ++ QF+ + E +
Sbjct: 810 ALVRAFEGWKDAEREGSAYEFCWRNFLSAQTLQAIHSLRKQFNYILKEAGLV 861
>UNIPROTKB|I3LRK0 [details] [associations]
symbol:I3LRK0 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 GO:GO:0004386
GeneTree:ENSGT00550000074257 EMBL:FP102731 EMBL:CU694750
Ensembl:ENSSSCT00000027140 Uniprot:I3LRK0
Length = 524
Score = 444 (161.4 bits), Expect = 6.6e-42, P = 6.6e-42
Identities = 101/222 (45%), Positives = 138/222 (62%)
Query: 15 SGLKHLQNKSVF---ELGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIAT 71
S L + ++VF +GV KI+++TNIAETSITIDD+VYV+D GK K +D + +
Sbjct: 82 SSLSSEEQQAVFVKPPVGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMES 141
Query: 72 LKPEWISLANAKQRRGRAGRVQEGVCYHLY-SRAREQTFQDYPLPEIQRTRLDEVVRTLE 130
L+ ++S ANA QR+GRAGRV GVC+HL+ S LPEIQR L+++ L
Sbjct: 142 LEDTFVSQANALQRKGRAGRVTSGVCFHLFTSHHFNHQLLKQQLPEIQRVPLEQLC--LR 199
Query: 131 SKKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPL 190
K +M S L + F+ ++++PP P S++ S LR + AL DE LTPL
Sbjct: 200 IKILEMFSTH---NLQSVFS-------RLIEPPHPDSLRASKIRLRDLGALTPDEKLTPL 249
Query: 191 GYHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAF 232
GYHLA LP+D +IGK++L SIF C+DP T+AASL FK F
Sbjct: 250 GYHLASLPVDVRIGKLMLFGSIFRCLDPALTIAASLAFKSPF 291
>ZFIN|ZDB-GENE-030131-4078 [details] [associations]
symbol:dhx57 "DEAH (Asp-Glu-Ala-Asp/His) box
polypeptide 57" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001650 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-030131-4078 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00550000074257
EMBL:BX248102 EMBL:AL935288 EMBL:CT998560 IPI:IPI00513320
Ensembl:ENSDART00000080351 ArrayExpress:F1QCB1 Bgee:F1QCB1
Uniprot:F1QCB1
Length = 1430
Score = 456 (165.6 bits), Expect = 8.6e-42, P = 8.6e-42
Identities = 97/225 (43%), Positives = 146/225 (64%)
Query: 15 SGLKHLQNKSVF---ELGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIAT 71
S L + + ++VF + GV KI+++TNIAETS+TIDD+VYV+D G+ K +D ++ +
Sbjct: 931 SSLSNEEQQAVFTRPQNGVTKIIISTNIAETSVTIDDVVYVIDSGRMKEKRYDASRSMES 990
Query: 72 LKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAR-EQTFQDYPLPEIQRTRLDEVVRTLE 130
L+ W+S ANA QR+GRAGRV GVC+HL++ R E LPEIQR L+++ L
Sbjct: 991 LEDVWVSRANALQRKGRAGRVASGVCFHLFTSHRFEHHLSQQQLPEIQRVPLEQLC--LR 1048
Query: 131 SKKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPL 190
K ++ + R L++ F+ Q+++PP S++ + + L + AL D+E LTPL
Sbjct: 1049 VKVLEVFAER---PLDSVFS-------QLIEPPTEGSLEAAKQRLCALGALTDEESLTPL 1098
Query: 191 GYHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCP 235
G+HLA LP+D +IGK++L+ +IF C+DP T+AASL FK F P
Sbjct: 1099 GWHLACLPVDVRIGKLMLLGAIFRCLDPALTIAASLAFKSPFVSP 1143
Score = 191 (72.3 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 37/110 (33%), Positives = 63/110 (57%)
Query: 237 IGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQGAKSDYVVLIN 296
IGK++L+ +IF C+DP T+AASL FK F P + ++ +++K + A SD++ L+
Sbjct: 1111 IGKLMLLGAIFRCLDPALTIAASLAFKSPFVSPWDKREEANEKKLAFSL-ANSDHLALMQ 1169
Query: 297 AMQGWEQALEHNY--AHDYCRENFXXXXXXXXXRDMKDQFSRTMHEMNFI 344
A +GW A + + + YCRENF +K QF+ + ++ F+
Sbjct: 1170 AYKGWCNAAQSGFKAGYQYCRENFLSIRGLQEIACLKRQFAELLSDIGFV 1219
>UNIPROTKB|F1NS70 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 OMA:RAFWESS EMBL:AADN02056192 EMBL:AADN02056193
IPI:IPI00591470 Ensembl:ENSGALT00000000247 Uniprot:F1NS70
Length = 1339
Score = 455 (165.2 bits), Expect = 9.7e-42, P = 9.7e-42
Identities = 98/236 (41%), Positives = 147/236 (62%)
Query: 5 FQIWFLQCPSSGLKHLQNKSVFEL---GVRKIVLATNIAETSITIDDIVYVVDCGKTKMS 61
+Q++ L S ++ L K+V + G+RKI+L+TNIAETSIT++D+V+V+D GK K
Sbjct: 567 YQVFMLH---SNMQTLDQKNVLKTPPSGIRKIILSTNIAETSITVNDVVFVIDSGKMKEK 623
Query: 62 NFDVKDNIATLKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTR 121
+FD + LK WIS A+A QRRGRAGR + GVC+HL+SR R Q ++ PE++R
Sbjct: 624 SFDALSCVTMLKTVWISKASAIQRRGRAGRCRPGVCFHLFSRLRFQNMLEFQTPELRRMP 683
Query: 122 LDEVVRTLESKKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDAL 181
L E+ L +K V+ P V + DPP V+ ++++L+ IDA+
Sbjct: 684 LQELC--LHTKLLAPVN-----------CPVVDFLMKAPDPPPALIVRNAIQMLKKIDAM 730
Query: 182 DDDEHLTPLGYHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMI 237
D E LT LGYHLA+LP++P +GKM+L A + C+DP+ T+A +L ++D F P +
Sbjct: 731 DVWEDLTELGYHLAELPVEPHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVLPTV 786
Score = 170 (64.9 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 33/115 (28%), Positives = 59/115 (51%)
Query: 235 PMIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPM--NMEKDVDKQKNILAQGAKSDYV 292
P +GKM+L A + C+DP+ T+A +L ++D F P + ++ + LA G SD++
Sbjct: 750 PHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVLPTVASQKRAAMLCRKRLAAGTFSDHM 809
Query: 293 VLINAMQGWEQALEHNYAHDYCRENFXXXXXXXXXRDMKDQFSRTMHEMNFISSR 347
VL+ A Q W++A + +C +NF M+ Q + + F+ +R
Sbjct: 810 VLLRAFQAWQKARSDGWERVFCEKNFLSQATMEIIIGMRTQLLGQLRALGFVRAR 864
>UNIPROTKB|H7C109 [details] [associations]
symbol:DHX57 "Putative ATP-dependent RNA helicase DHX57"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
GO:GO:0004386 EMBL:AC018693 InterPro:IPR011709 Pfam:PF07717
HGNC:HGNC:20086 ChiTaRS:DHX57 Ensembl:ENST00000452978
Uniprot:H7C109
Length = 665
Score = 441 (160.3 bits), Expect = 2.7e-41, P = 2.7e-41
Identities = 101/225 (44%), Positives = 137/225 (60%)
Query: 15 SGLKHLQNKSVF---ELGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIAT 71
S L + ++VF GV KI+++TNIAETSITIDD+VYV+D GK K +D + +
Sbjct: 212 SSLSSEEQQAVFVKPPAGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMES 271
Query: 72 LKPEWISLANAKQRRGRAGRVQEGVCYHLY-SRAREQTFQDYPLPEIQRTRLDEVVRTLE 130
L+ ++S ANA QR+GRAGRV GVC+HL+ S LPEIQR L+++ L
Sbjct: 272 LEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLC--LR 329
Query: 131 SKKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPL 190
K +M S L + F+ ++++PP S++ S LR + AL DE LTPL
Sbjct: 330 IKILEMFSAH---NLQSVFS-------RLIEPPHTDSLRASKIRLRDLGALTPDERLTPL 379
Query: 191 GYHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCP 235
GYHLA LP+D +IGK++L SIF C+DP T+AASL FK F P
Sbjct: 380 GYHLASLPVDVRIGKLMLFGSIFRCLDPALTIAASLAFKSPFVSP 424
Score = 196 (74.1 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 38/109 (34%), Positives = 63/109 (57%)
Query: 237 IGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQGAKSDYVVLIN 296
IGK++L SIF C+DP T+AASL FK F P + +++ + QK + A SDY+ L+
Sbjct: 392 IGKLMLFGSIFRCLDPALTIAASLAFKSPFVSPWDKKEEAN-QKKLEFAFANSDYLALLQ 450
Query: 297 AMQGWEQALEHNY--AHDYCRENFXXXXXXXXXRDMKDQFSRTMHEMNF 343
A +GW+ + + +++YCR+NF +K QF+ + ++ F
Sbjct: 451 AYKGWQLSTKEGVRASYNYCRQNFLSGRVLQEMASLKRQFTELLSDIGF 499
>ASPGD|ASPL0000008624 [details] [associations]
symbol:AN5839 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005829 "cytosol"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:BN001301 EMBL:AACD01000100
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
GO:GO:0008026 OrthoDB:EOG4TXG12 RefSeq:XP_663443.1
EnsemblFungi:CADANIAT00007203 GeneID:2870747 KEGG:ani:AN5839.2
HOGENOM:HOG000213693 OMA:KNIRRAI Uniprot:Q5B0U1
Length = 1436
Score = 373 (136.4 bits), Expect = 9.0e-41, Sum P(2) = 9.0e-41
Identities = 86/229 (37%), Positives = 129/229 (56%)
Query: 8 WFLQCPSSGLKHLQNKSVFEL---GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFD 64
W + S + + + F + G+RKIV+ATNIAET ITI DI V+D GK K FD
Sbjct: 949 WIIHALHSSIASDEQEKAFVVPPDGMRKIVIATNIAETGITIPDITAVIDAGKEKTMRFD 1008
Query: 65 VKDNIATLKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAR-EQTFQDYPLPEIQRTRLD 123
+ ++ L +IS ANAKQRRGRAGRVQ G+C+H++++ R + + PE+ R L
Sbjct: 1009 ERRQLSRLVEAFISRANAKQRRGRAGRVQRGICFHMFTKHRHDNLLAEQQTPEMLRLSLQ 1068
Query: 124 EVVRTLESKKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDD 183
++V ++ K V +L + LDPP +++ ++ L+ + AL
Sbjct: 1069 DLVLRVKICKLGEVE---PTLL------------EALDPPSSKNIRRAIDALKEVKALTS 1113
Query: 184 DEHLTPLGYHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAF 232
E+LTPLG LAKLPLD +GK+++ + F C+D ++AA L K F
Sbjct: 1114 TENLTPLGQQLAKLPLDVFLGKLIIHGAFFKCLDAAISIAAILSCKSPF 1162
Score = 104 (41.7 bits), Expect = 9.0e-41, Sum P(2) = 9.0e-41
Identities = 27/114 (23%), Positives = 51/114 (44%)
Query: 237 IGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQGAKSDYVVLIN 296
+GK+++ + F C+D ++AA L K F M + + +G SD + + N
Sbjct: 1133 LGKLIIHGAFFKCLDAAISIAAILSCKSPFVNTMGSNAQKEAVRLGFRRG-DSDLLTVYN 1191
Query: 297 AMQGWEQALEHNYAHDY--CRENFXXXXXXXXXRDMKDQFSRTMHEMNFISSRT 348
A W++ A++Y CR+NF D+K Q ++ + ++ T
Sbjct: 1192 AYCAWKRTRSTPGANEYAFCRKNFLSPQTLLNIEDVKLQLMVSIADAGLVTLDT 1245
>UNIPROTKB|F1M8G5 [details] [associations]
symbol:Dhx57 "Protein Dhx57" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
RGD:1310340 NextBio:689608 IPI:IPI00391644
Ensembl:ENSRNOT00000037714 ArrayExpress:F1M8G5 Uniprot:F1M8G5
Length = 1338
Score = 445 (161.7 bits), Expect = 1.1e-40, P = 1.1e-40
Identities = 102/225 (45%), Positives = 139/225 (61%)
Query: 15 SGLKHLQNKSVF---ELGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIAT 71
S L + ++VF LGV KI+++TNIAETSITIDD+VYV+D GK K +D + +
Sbjct: 840 SSLSSEEQQAVFVKPPLGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDAGKGMES 899
Query: 72 LKPEWISLANAKQRRGRAGRVQEGVCYHLY-SRAREQTFQDYPLPEIQRTRLDEVVRTLE 130
L+ ++S ANA QR+GRAGRV GVC+HL+ S LPEIQR L+++ L
Sbjct: 900 LEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLC--LR 957
Query: 131 SKKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPL 190
K +M S L + F+ ++++PP S++ S LR + AL DE LTPL
Sbjct: 958 IKILEMFSTH---NLQSVFS-------RLIEPPHVDSLRASKVRLRDLGALTPDEKLTPL 1007
Query: 191 GYHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCP 235
GYHLA LP+D +IGK++L+ SIF C+DP T+AASL FK F P
Sbjct: 1008 GYHLASLPVDVRIGKLMLLGSIFRCLDPALTIAASLAFKSPFVSP 1052
Score = 199 (75.1 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 38/110 (34%), Positives = 66/110 (60%)
Query: 237 IGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQGAKSDYVVLIN 296
IGK++L+ SIF C+DP T+AASL FK F P + +++ + QK + A SDY+ L+
Sbjct: 1020 IGKLMLLGSIFRCLDPALTIAASLAFKSPFVSPWDKKEEAN-QKKLEFAFANSDYLALLC 1078
Query: 297 AMQGWEQALEHNY--AHDYCRENFXXXXXXXXXRDMKDQFSRTMHEMNFI 344
A +GW+ + + + +++YCR+NF +K QF+ + ++ F+
Sbjct: 1079 AYKGWQLSTKESARASYNYCRQNFLSGRTLQEMASLKRQFTELLSDIGFV 1128
>UNIPROTKB|F1LSC4 [details] [associations]
symbol:Dhx57 "Protein Dhx57" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:90957 KO:K13026 OMA:RAYKGWQ
IPI:IPI00369334 RefSeq:NP_001178836.1 UniGene:Rn.15951
Ensembl:ENSRNOT00000037705 GeneID:366532 KEGG:rno:366532
RGD:1310340 NextBio:689608 ArrayExpress:F1LSC4 Uniprot:F1LSC4
Length = 1391
Score = 445 (161.7 bits), Expect = 1.2e-40, P = 1.2e-40
Identities = 102/225 (45%), Positives = 139/225 (61%)
Query: 15 SGLKHLQNKSVF---ELGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIAT 71
S L + ++VF LGV KI+++TNIAETSITIDD+VYV+D GK K +D + +
Sbjct: 893 SSLSSEEQQAVFVKPPLGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDAGKGMES 952
Query: 72 LKPEWISLANAKQRRGRAGRVQEGVCYHLY-SRAREQTFQDYPLPEIQRTRLDEVVRTLE 130
L+ ++S ANA QR+GRAGRV GVC+HL+ S LPEIQR L+++ L
Sbjct: 953 LEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLC--LR 1010
Query: 131 SKKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPL 190
K +M S L + F+ ++++PP S++ S LR + AL DE LTPL
Sbjct: 1011 IKILEMFSTH---NLQSVFS-------RLIEPPHVDSLRASKVRLRDLGALTPDEKLTPL 1060
Query: 191 GYHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCP 235
GYHLA LP+D +IGK++L+ SIF C+DP T+AASL FK F P
Sbjct: 1061 GYHLASLPVDVRIGKLMLLGSIFRCLDPALTIAASLAFKSPFVSP 1105
Score = 199 (75.1 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 38/110 (34%), Positives = 66/110 (60%)
Query: 237 IGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQGAKSDYVVLIN 296
IGK++L+ SIF C+DP T+AASL FK F P + +++ + QK + A SDY+ L+
Sbjct: 1073 IGKLMLLGSIFRCLDPALTIAASLAFKSPFVSPWDKKEEAN-QKKLEFAFANSDYLALLC 1131
Query: 297 AMQGWEQALEHNY--AHDYCRENFXXXXXXXXXRDMKDQFSRTMHEMNFI 344
A +GW+ + + + +++YCR+NF +K QF+ + ++ F+
Sbjct: 1132 AYKGWQLSTKESARASYNYCRQNFLSGRTLQEMASLKRQFTELLSDIGFV 1181
>MGI|MGI:2147067 [details] [associations]
symbol:Dhx57 "DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
MGI:MGI:2147067 GO:GO:0005524 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:90957 HOVERGEN:HBG080658 KO:K13026
OMA:RAYKGWQ OrthoDB:EOG4ZS929 EMBL:AK035344 EMBL:AK053628
EMBL:AK162192 EMBL:BC026474 EMBL:BC062952 EMBL:BC065169
EMBL:BC066091 IPI:IPI00420351 IPI:IPI00453609 IPI:IPI00752611
IPI:IPI00753147 IPI:IPI00755243 RefSeq:NP_001157231.1
RefSeq:NP_945180.2 UniGene:Mm.12412 ProteinModelPortal:Q6P5D3
SMR:Q6P5D3 PhosphoSite:Q6P5D3 PaxDb:Q6P5D3 PRIDE:Q6P5D3
Ensembl:ENSMUST00000038166 Ensembl:ENSMUST00000086555 GeneID:106794
KEGG:mmu:106794 UCSC:uc008dqx.2 UCSC:uc008dqy.2 UCSC:uc008dqz.2
UCSC:uc008dra.2 UCSC:uc008drb.1 InParanoid:Q6P5D3 NextBio:358388
Bgee:Q6P5D3 CleanEx:MM_DHX57 Genevestigator:Q6P5D3
GermOnline:ENSMUSG00000035051 Uniprot:Q6P5D3
Length = 1388
Score = 442 (160.7 bits), Expect = 2.5e-40, P = 2.5e-40
Identities = 101/225 (44%), Positives = 139/225 (61%)
Query: 15 SGLKHLQNKSVF---ELGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIAT 71
S L + ++VF +GV KI+++TNIAETSITIDD+VYV+D GK K +D + +
Sbjct: 890 SSLSSEEQQAVFVKPPMGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDAGKGMES 949
Query: 72 LKPEWISLANAKQRRGRAGRVQEGVCYHLY-SRAREQTFQDYPLPEIQRTRLDEVVRTLE 130
L+ ++S ANA QR+GRAGRV GVC+HL+ S LPEIQR L+++ L
Sbjct: 950 LEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLC--LR 1007
Query: 131 SKKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPL 190
K +M S L + F+ ++++PP S++ S LR + AL DE LTPL
Sbjct: 1008 IKILEMFSTH---NLQSVFS-------RLIEPPHIDSLRASKVRLRDLGALTPDEKLTPL 1057
Query: 191 GYHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCP 235
GYHLA LP+D +IGK++L+ SIF C+DP T+AASL FK F P
Sbjct: 1058 GYHLASLPVDVRIGKLMLLGSIFRCLDPALTIAASLAFKSPFVSP 1102
Score = 199 (75.1 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 38/110 (34%), Positives = 66/110 (60%)
Query: 237 IGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQGAKSDYVVLIN 296
IGK++L+ SIF C+DP T+AASL FK F P + +++ + QK + A SDY+ L+
Sbjct: 1070 IGKLMLLGSIFRCLDPALTIAASLAFKSPFVSPWDKKEEAN-QKKLEFAFANSDYLALLC 1128
Query: 297 AMQGWEQALEHNY--AHDYCRENFXXXXXXXXXRDMKDQFSRTMHEMNFI 344
A +GW+ + + + +++YCR+NF +K QF+ + ++ F+
Sbjct: 1129 AYKGWQLSTKESARASYNYCRQNFLSGRTLQEMASLKRQFTELLSDIGFV 1178
>UNIPROTKB|E2QX71 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR001650 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR009060 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940
SMART:SM00165 PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074257 CTD:90957 KO:K13026
OMA:RAYKGWQ EMBL:AAEX03010868 RefSeq:XP_540155.1
Ensembl:ENSCAFT00000010087 GeneID:483040 KEGG:cfa:483040
Uniprot:E2QX71
Length = 1382
Score = 441 (160.3 bits), Expect = 3.2e-40, P = 3.2e-40
Identities = 101/225 (44%), Positives = 138/225 (61%)
Query: 15 SGLKHLQNKSVF---ELGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIAT 71
S L + ++VF +GV KI+++TNIAETSITIDD+VYV+D GK K +D + +
Sbjct: 884 SSLSSEEQQAVFVKPPVGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMES 943
Query: 72 LKPEWISLANAKQRRGRAGRVQEGVCYHLY-SRAREQTFQDYPLPEIQRTRLDEVVRTLE 130
L+ ++S ANA QR+GRAGRV GVC+HL+ S LPEIQR L+++ L
Sbjct: 944 LEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHFNHQLLKQQLPEIQRVPLEQLC--LR 1001
Query: 131 SKKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPL 190
K +M S L + F+ ++++PP S++ S LR + AL DE LTPL
Sbjct: 1002 IKILEMFSTH---NLQSVFS-------RLIEPPHTDSLRASKIRLRDLGALTPDEKLTPL 1051
Query: 191 GYHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCP 235
GYHLA LP+D +IGK++L SIF C+DP T+AASL FK F P
Sbjct: 1052 GYHLASLPVDVRIGKLMLFGSIFRCLDPALTIAASLAFKSPFVSP 1096
Score = 202 (76.2 bits), Expect = 6.5e-13, P = 6.5e-13
Identities = 38/110 (34%), Positives = 65/110 (59%)
Query: 237 IGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQGAKSDYVVLIN 296
IGK++L SIF C+DP T+AASL FK F P + +++ + QK + A SDY+ L+
Sbjct: 1064 IGKLMLFGSIFRCLDPALTIAASLAFKSPFVSPWDKKEEAN-QKKLEFAFANSDYLALLR 1122
Query: 297 AMQGWEQALEHNY--AHDYCRENFXXXXXXXXXRDMKDQFSRTMHEMNFI 344
A +GW+ +++ +++YCR+NF +K QF+ + ++ F+
Sbjct: 1123 AYKGWQLSMKEGMRASYNYCRQNFLSGRVLQEMASLKRQFTELLSDIGFV 1172
>UNIPROTKB|Q6P158 [details] [associations]
symbol:DHX57 "Putative ATP-dependent RNA helicase DHX57"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR009060 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00642 Pfam:PF04408 Pfam:PF05773
PROSITE:PS00690 PROSITE:PS50103 PROSITE:PS51194 SMART:SM00356
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 PROSITE:PS50030
EMBL:AC018693 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AK057423 EMBL:BC053623 EMBL:BC060778
EMBL:BC065278 EMBL:BC131534 EMBL:AF283512 IPI:IPI00168885
IPI:IPI00399364 IPI:IPI00749029 RefSeq:NP_945314.1
UniGene:Hs.468226 ProteinModelPortal:Q6P158 SMR:Q6P158
IntAct:Q6P158 STRING:Q6P158 PhosphoSite:Q6P158 DMDM:94710252
PaxDb:Q6P158 PeptideAtlas:Q6P158 PRIDE:Q6P158
Ensembl:ENST00000295373 GeneID:90957 KEGG:hsa:90957 UCSC:uc002rre.3
UCSC:uc002rrg.3 CTD:90957 GeneCards:GC02M039025 HGNC:HGNC:20086
HPA:HPA036160 neXtProt:NX_Q6P158 PharmGKB:PA134919698
HOVERGEN:HBG080658 InParanoid:Q6P158 KO:K13026 OMA:RAYKGWQ
OrthoDB:EOG4ZS929 PhylomeDB:Q6P158 ChiTaRS:DHX57 GenomeRNAi:90957
NextBio:77048 ArrayExpress:Q6P158 Bgee:Q6P158 CleanEx:HS_DHX57
Genevestigator:Q6P158 GermOnline:ENSG00000163214 Uniprot:Q6P158
Length = 1386
Score = 441 (160.3 bits), Expect = 3.2e-40, P = 3.2e-40
Identities = 101/225 (44%), Positives = 137/225 (60%)
Query: 15 SGLKHLQNKSVF---ELGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIAT 71
S L + ++VF GV KI+++TNIAETSITIDD+VYV+D GK K +D + +
Sbjct: 888 SSLSSEEQQAVFVKPPAGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMES 947
Query: 72 LKPEWISLANAKQRRGRAGRVQEGVCYHLY-SRAREQTFQDYPLPEIQRTRLDEVVRTLE 130
L+ ++S ANA QR+GRAGRV GVC+HL+ S LPEIQR L+++ L
Sbjct: 948 LEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLC--LR 1005
Query: 131 SKKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPL 190
K +M S L + F+ ++++PP S++ S LR + AL DE LTPL
Sbjct: 1006 IKILEMFSAH---NLQSVFS-------RLIEPPHTDSLRASKIRLRDLGALTPDERLTPL 1055
Query: 191 GYHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCP 235
GYHLA LP+D +IGK++L SIF C+DP T+AASL FK F P
Sbjct: 1056 GYHLASLPVDVRIGKLMLFGSIFRCLDPALTIAASLAFKSPFVSP 1100
Score = 196 (74.1 bits), Expect = 3.2e-12, P = 3.2e-12
Identities = 38/109 (34%), Positives = 63/109 (57%)
Query: 237 IGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQGAKSDYVVLIN 296
IGK++L SIF C+DP T+AASL FK F P + +++ + QK + A SDY+ L+
Sbjct: 1068 IGKLMLFGSIFRCLDPALTIAASLAFKSPFVSPWDKKEEAN-QKKLEFAFANSDYLALLQ 1126
Query: 297 AMQGWEQALEHNY--AHDYCRENFXXXXXXXXXRDMKDQFSRTMHEMNF 343
A +GW+ + + +++YCR+NF +K QF+ + ++ F
Sbjct: 1127 AYKGWQLSTKEGVRASYNYCRQNFLSGRVLQEMASLKRQFTELLSDIGF 1175
>UNIPROTKB|F1N1A2 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 PROSITE:PS50030
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 OMA:RAYKGWQ EMBL:DAAA02030601
EMBL:DAAA02030599 EMBL:DAAA02030600 IPI:IPI00709831
Ensembl:ENSBTAT00000019540 ArrayExpress:F1N1A2 Uniprot:F1N1A2
Length = 1382
Score = 440 (159.9 bits), Expect = 4.1e-40, P = 4.1e-40
Identities = 101/225 (44%), Positives = 137/225 (60%)
Query: 15 SGLKHLQNKSVF---ELGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIAT 71
S L + ++VF +GV KI+++TNIAETSITIDD+VYV+D GK K +D + +
Sbjct: 883 SSLSSEEQQAVFVKPPMGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMES 942
Query: 72 LKPEWISLANAKQRRGRAGRVQEGVCYHLY-SRAREQTFQDYPLPEIQRTRLDEVVRTLE 130
L+ ++S ANA QR+GRAGRV GVC+HL+ S LPEIQR L+++ L
Sbjct: 943 LEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHFNHQLLKQQLPEIQRVPLEQLC--LR 1000
Query: 131 SKKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPL 190
K +M S L + F ++++PP S++ S LR + AL DE LTPL
Sbjct: 1001 IKILEMFSTH---NLQSVFA-------RLIEPPHADSLRASKIRLRDLGALTPDETLTPL 1050
Query: 191 GYHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCP 235
GYHLA LP+D +IGK++L SIF C+DP T+AASL FK F P
Sbjct: 1051 GYHLASLPVDVRIGKLMLFGSIFRCLDPALTIAASLAFKSPFVSP 1095
Score = 202 (76.2 bits), Expect = 6.5e-13, P = 6.5e-13
Identities = 38/110 (34%), Positives = 65/110 (59%)
Query: 237 IGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQGAKSDYVVLIN 296
IGK++L SIF C+DP T+AASL FK F P + +++ + QK + A SDY+ L+
Sbjct: 1063 IGKLMLFGSIFRCLDPALTIAASLAFKSPFVSPWDKKEEAN-QKKLEFAFANSDYLALLR 1121
Query: 297 AMQGWEQALEHNY--AHDYCRENFXXXXXXXXXRDMKDQFSRTMHEMNFI 344
A +GW+ +++ +++YCR+NF +K QF+ + ++ F+
Sbjct: 1122 AYKGWQLSMKEGMRASYNYCRQNFLSGRVLQEMASLKRQFTELLSDIGFV 1171
>UNIPROTKB|Q14147 [details] [associations]
symbol:DHX34 "Probable ATP-dependent RNA helicase DHX34"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00355
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0008270
GO:GO:0003723 GO:GO:0005622 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:D50924 EMBL:AC008754 EMBL:AK297692
IPI:IPI00382739 RefSeq:NP_055496.2 UniGene:Hs.151706
ProteinModelPortal:Q14147 SMR:Q14147 IntAct:Q14147
PhosphoSite:Q14147 DMDM:311033371 PaxDb:Q14147 PRIDE:Q14147
DNASU:9704 Ensembl:ENST00000328771 GeneID:9704 KEGG:hsa:9704
UCSC:uc010xyn.2 CTD:9704 GeneCards:GC19P047853 HGNC:HGNC:16719
HPA:HPA042159 HPA:HPA043558 neXtProt:NX_Q14147 PharmGKB:PA27221
HOGENOM:HOG000232193 OMA:DSDQVFH OrthoDB:EOG4GB75B PhylomeDB:Q14147
ChiTaRS:DHX34 GenomeRNAi:9704 NextBio:36469 Bgee:Q14147
CleanEx:HS_DHX34 Genevestigator:Q14147 GermOnline:ENSG00000134815
Uniprot:Q14147
Length = 1143
Score = 274 (101.5 bits), Expect = 7.6e-40, Sum P(3) = 7.6e-40
Identities = 58/129 (44%), Positives = 81/129 (62%)
Query: 6 QIWFLQCPSSGLKHLQNKSVFEL---GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSN 62
Q W + S L VF++ GVRK +L+TNIAETS+TID I +VVD GK K +
Sbjct: 406 QRWVVLPLHSALSVADQDKVFDVAPPGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMS 465
Query: 63 FDVKDNIATLKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRL 122
+D + + L+ WIS A+A+QR+GRAGR GVC+ LY+ + F YP+PEI+R L
Sbjct: 466 YDPQAKLQRLQEFWISQASAEQRKGRAGRTGPGVCFRLYAESDYDAFAPYPVPEIRRVAL 525
Query: 123 DEVVRTLES 131
D +V ++S
Sbjct: 526 DSLVLQMKS 534
Score = 179 (68.1 bits), Expect = 7.6e-40, Sum P(3) = 7.6e-40
Identities = 36/73 (49%), Positives = 52/73 (71%)
Query: 160 LDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKMLLMASIFSCVDPV 219
++PP PAS++ ++ LR ALD E LTP+G LA+LP+D IGKML++ S+FS V+PV
Sbjct: 546 IEPPPPASLETAILYLRDQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFSLVEPV 605
Query: 220 FTVAASLGFKDAF 232
T+AA+L + F
Sbjct: 606 LTIAAALSVQSPF 618
Score = 101 (40.6 bits), Expect = 3.1e-30, Sum P(2) = 3.1e-30
Identities = 26/112 (23%), Positives = 47/112 (41%)
Query: 236 MIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQGAKSDYVVLI 295
+IGKML++ S+FS V+PV T+AA+L + F + + L + + D L
Sbjct: 588 VIGKMLILGSMFSLVEPVLTIAAALSVQSPFTRSAQSSPECAAARRPL-ESDQGDPFTLF 646
Query: 296 NAMQGWEQALEHNYAHD--YCRENFXXXXXXXXXRDMKDQFSRTMHEMNFIS 345
N W Q + +CR +++ QF + + ++
Sbjct: 647 NVFNAWVQVKSERSRNSRKWCRRRGIEEHRLYEMANLRRQFKELLEDHGLLA 698
Score = 37 (18.1 bits), Expect = 7.6e-40, Sum P(3) = 7.6e-40
Identities = 6/11 (54%), Positives = 7/11 (63%)
Query: 301 WEQALEHNYAH 311
WE AL+ AH
Sbjct: 950 WESALDRQLAH 960
>FB|FBgn0030246 [details] [associations]
symbol:CG1582 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001650 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014298 GO:GO:0008270 GO:GO:0006200 GO:GO:0003676
GO:GO:0004386 Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 KO:K13026 EMBL:AY119481
RefSeq:NP_572663.1 UniGene:Dm.11248 SMR:Q9VZ55
EnsemblMetazoa:FBtr0073403 GeneID:32021 KEGG:dme:Dmel_CG1582
UCSC:CG1582-RA FlyBase:FBgn0030246 InParanoid:Q9VZ55 OMA:IFQCLDS
OrthoDB:EOG4RJDGG ChiTaRS:CG1582 GenomeRNAi:32021 NextBio:776414
Uniprot:Q9VZ55
Length = 1288
Score = 434 (157.8 bits), Expect = 1.6e-39, P = 1.6e-39
Identities = 101/209 (48%), Positives = 131/209 (62%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
G RKIVL+TNIAETS+TIDD V+VVDCG K FD N+ +L W+S ANAKQR+GR
Sbjct: 809 GKRKIVLSTNIAETSVTIDDCVFVVDCGLMKEKCFDSNRNMESLDLVWVSRANAKQRKGR 868
Query: 89 AGRVQEGVCYHLYSRAREQT-FQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNT 147
AGRV GVC HLY+ R Q P+PEIQR L+++V L K + + R NT
Sbjct: 869 AGRVMPGVCIHLYTSYRYQYHILAQPVPEIQRVPLEQIV--LRIKTLQTFASR-----NT 921
Query: 148 AFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKML 207
+ V + L+ P SV +L LR + ALD ++ LTPLG+HLA LP+D +IGK++
Sbjct: 922 -----LSVLLETLEAPTEDSVLGALTRLRDVGALDAEDQLTPLGHHLAALPVDVRIGKLM 976
Query: 208 LMASIFSCVDPVFTVAASLGFKDAFYCPM 236
L +IF C+D V T+AA L K F P+
Sbjct: 977 LYGAIFQCLDSVLTIAACLSNKSPFVSPL 1005
Score = 172 (65.6 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 38/111 (34%), Positives = 59/111 (53%)
Query: 237 IGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQGAKSDYVVLIN 296
IGK++L +IF C+D V T+AA L K F P+N + DK K + A G SD++ ++N
Sbjct: 972 IGKLMLYGAIFQCLDSVLTIAACLSNKSPFVSPLNKRTEADKCKRMFALG-NSDHLTVLN 1030
Query: 297 AMQGW-EQALEHNYA--HDYCRENFXXXXXXXXXRDMKDQFSRTMHEMNFI 344
A + W + A NYA +Y E+F D+K Q+ + + F+
Sbjct: 1031 AYRKWLDVARRGNYAASRNYASEHFLSLNTLETIADLKYQYLELLVSIGFV 1081
>UNIPROTKB|F1MNU7 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 CTD:64848 OMA:RAFWESS EMBL:DAAA02027655
IPI:IPI00689346 RefSeq:NP_001179740.1 UniGene:Bt.24975
ProteinModelPortal:F1MNU7 Ensembl:ENSBTAT00000018745 GeneID:541024
KEGG:bta:541024 NextBio:20878969 Uniprot:F1MNU7
Length = 1429
Score = 431 (156.8 bits), Expect = 4.0e-39, P = 4.0e-39
Identities = 94/234 (40%), Positives = 143/234 (61%)
Query: 5 FQIWFLQCPSSGLKHLQNKSVFE---LGVRKIVLATNIAETSITIDDIVYVVDCGKTKMS 61
+Q++ L S ++ K V + GVRKI+L+TNIAETSIT++D+V+V+D GK K
Sbjct: 655 YQVFMLH---SNMQTSDQKKVLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEK 711
Query: 62 NFDVKDNIATLKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTR 121
+FD + + LK WIS A+A QR+GRAGR + G+C+ L+SR R Q ++ PE+ R
Sbjct: 712 SFDALNFVTMLKMVWISKASAIQRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMP 771
Query: 122 LDEVVRTLESKKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDAL 181
L E+ L +K V N A ++ + +PP V+ ++++L+ IDA+
Sbjct: 772 LQELC--LHTKLLAPV--------NCAIADFLM---KAPEPPPALIVRNAVQMLKTIDAM 818
Query: 182 DDDEHLTPLGYHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCP 235
D E LT LGYHLA LP++P +GKM+L A + C+DP+ T+A +L ++D F P
Sbjct: 819 DAWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVLP 872
Score = 156 (60.0 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 33/116 (28%), Positives = 56/116 (48%)
Query: 235 PMIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNM-EKDVDK--QKNILAQGAKSDY 291
P +GKM+L A + C+DP+ T+A +L ++D F P +K +K A G SD+
Sbjct: 838 PHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRFTA-GTFSDH 896
Query: 292 VVLINAMQGWEQALEHNYAHDYCRENFXXXXXXXXXRDMKDQFSRTMHEMNFISSR 347
+ L+ A Q W++A + +C +NF M+ Q + F+ +R
Sbjct: 897 MALLRAFQAWQKARSDGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRAR 952
>TAIR|locus:2196265 [details] [associations]
symbol:AT1G58060 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
IPI:IPI00533149 RefSeq:NP_176103.2 UniGene:At.27872
ProteinModelPortal:F4I9Q5 SMR:F4I9Q5 PRIDE:F4I9Q5
EnsemblPlants:AT1G58060.1 GeneID:842173 KEGG:ath:AT1G58060
OMA:FLSYKSP Uniprot:F4I9Q5
Length = 1459
Score = 431 (156.8 bits), Expect = 4.1e-39, P = 4.1e-39
Identities = 97/232 (41%), Positives = 142/232 (61%)
Query: 8 WFLQCPSSGLKHLQNKSVF---ELGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFD 64
W L SS + + + VF G+RK++ ATNIAETSITIDD+VYV+D GK K + ++
Sbjct: 948 WLLPLHSS-IASSEQRKVFLRPPKGLRKVIAATNIAETSITIDDVVYVIDSGKHKENRYN 1006
Query: 65 VKDNIATLKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAR-EQTFQDYPLPEIQRTRLD 123
+ ++++ +WIS ANA+QR GRAGRV+ G+C+ LY+R R E+ + Y +PE+ R L
Sbjct: 1007 PQKKLSSMVEDWISQANARQRTGRAGRVKPGICFSLYTRYRFEKLMRPYQVPEMLRMPLV 1066
Query: 124 EVVRTLESKKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDD 183
E+ L+ K + K L+ A L+PP ++ ++ LL + A++
Sbjct: 1067 ELC--LQIKLLGL--GHIKPFLSRA-----------LEPPSEGAMTSAISLLHEVGAVEG 1111
Query: 184 DEHLTPLGYHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCP 235
DE LTPLG+HLAKLP+D IGKMLL IF C+ P+ ++AA L +K F P
Sbjct: 1112 DEELTPLGHHLAKLPVDVLIGKMLLYGGIFGCLSPILSIAAFLSYKSPFIYP 1163
Score = 135 (52.6 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 35/125 (28%), Positives = 60/125 (48%)
Query: 236 MIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQ--GA------ 287
+IGKMLL IF C+ P+ ++AA L +K F P + +++VD+ K L G
Sbjct: 1130 LIGKMLLYGGIFGCLSPILSIAAFLSYKSPFIYPKDEKQNVDRVKLALLSDNGVSSSDLN 1189
Query: 288 ----KSDYVVLINAMQGWEQALEHN---YAHDYCRENFXXXXXXXXXRDMKDQFSRTMHE 340
+SD+++++ A W + L+ A +C F RDM+ QF + +
Sbjct: 1190 NNDRQSDHLLMMVAYDKWVKILQERGMKAAQRFCESKFLSSSVMRMIRDMRVQFGTLLAD 1249
Query: 341 MNFIS 345
+ I+
Sbjct: 1250 IGLIN 1254
Score = 38 (18.4 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 16/74 (21%), Positives = 34/74 (45%)
Query: 53 VDCGKTKMSNFDVKDNIATLKP------EWISLAN----AKQRRGRAGRVQEGVCYHLYS 102
++C + ++ D ++ ++ +P E+ S + AK++R + G+ Q G+
Sbjct: 203 LECWEDEVDGIDPRNKVSGPRPFDVIAKEYYSARSDAIKAKEKRDKRGQEQAGLAI---- 258
Query: 103 RAREQTFQDYPLPE 116
R +Q D L E
Sbjct: 259 RKLKQEISDLGLSE 272
>UNIPROTKB|J9PAM3 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 GO:GO:0008026
EMBL:AAEX03007702 Ensembl:ENSCAFT00000046695 Uniprot:J9PAM3
Length = 1000
Score = 427 (155.4 bits), Expect = 5.3e-39, P = 5.3e-39
Identities = 95/234 (40%), Positives = 142/234 (60%)
Query: 5 FQIWFLQCPSSGLKHLQNKSVFE---LGVRKIVLATNIAETSITIDDIVYVVDCGKTKMS 61
+Q++ L S ++ K V + GVRKI+L+TNIAETSIT++D+V+V+D GK K
Sbjct: 655 YQVFMLH---SNMQTSDQKKVLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEK 711
Query: 62 NFDVKDNIATLKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTR 121
+FD + + LK WIS A+A QR+GRAGR + G+C+ L+SR R Q ++ PE+ R
Sbjct: 712 SFDALNFVTMLKMVWISKASAVQRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMP 771
Query: 122 LDEVVRTLESKKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDAL 181
L E+ L +K V+ L A P +PP V+ ++++L+ IDA+
Sbjct: 772 LQELC--LHTKLLAPVNCPIADFLMKA-------P----EPPPALIVRNAVQMLKTIDAM 818
Query: 182 DDDEHLTPLGYHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCP 235
D E LT LGYHLA LP++P +GKM+L A + C+DP+ T+A +L ++D F P
Sbjct: 819 DAWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVLP 872
Score = 157 (60.3 bits), Expect = 5.1e-08, P = 5.1e-08
Identities = 43/167 (25%), Positives = 72/167 (43%)
Query: 189 PLGYHLAKLPLDPQ---IGKMLLMASIFSCVDPVFTVAASLGFK--DAFYCPMIGKMLLM 243
P+ L K P P + + M +D + LG+ D P +GKM+L
Sbjct: 788 PIADFLMKAPEPPPALIVRNAVQMLKTIDAMD-AWEDLTELGYHLADLPVEPHLGKMVLC 846
Query: 244 ASIFSCVDPVFTVAASLGFKDAFYCPMNM-EKDVDK--QKNILAQGAKSDYVVLINAMQG 300
A + C+DP+ T+A +L ++D F P +K +K A G SD++ L+ A Q
Sbjct: 847 AVVLKCLDPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRFTA-GTFSDHMALLRAFQA 905
Query: 301 WEQALEHNYAHDYCRENFXXXXXXXXXRDMKDQFSRTMHEMNFISSR 347
W++A + +C +NF M+ Q + F+ +R
Sbjct: 906 WQKARSDGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRAR 952
>CGD|CAL0005664 [details] [associations]
symbol:orf19.6818 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908 PROSITE:PS51194
SMART:SM00490 SMART:SM00591 SMART:SM00847 CGD:CAL0005664
GO:GO:0005524 GO:GO:0003676 Gene3D:3.10.110.10 InterPro:IPR016135
SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
EMBL:AACQ01000029 EMBL:AACQ01000028 RefSeq:XP_719795.1
RefSeq:XP_719912.1 ProteinModelPortal:Q5ADM3 GeneID:3638543
GeneID:3638643 KEGG:cal:CaO19.14110 KEGG:cal:CaO19.6818
Uniprot:Q5ADM3
Length = 1370
Score = 375 (137.1 bits), Expect = 6.0e-39, Sum P(2) = 6.0e-39
Identities = 91/220 (41%), Positives = 127/220 (57%)
Query: 9 FLQCP-SSGLKHLQNKSVFEL---GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFD 64
F+ P SGL + KS+F+ G RK+V++TNIAETSITI D V V+D GK+K FD
Sbjct: 848 FMALPLHSGLTSAEQKSIFKTAPKGKRKVVVSTNIAETSITIPDCVAVIDTGKSKNLFFD 907
Query: 65 VKDNIATLKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDE 124
K N L W S A +QRRGRAGRV G CYHLY++ + Q P+PEI+RTRL+
Sbjct: 908 HKLNTTKLIESWCSQAEVRQRRGRAGRVTAGTCYHLYTKETFEAMQKQPIPEIKRTRLEN 967
Query: 125 VVRTLESKKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDD 184
+ ++S V+ L++ LD PD +S+ + + L I AL ++
Sbjct: 968 LYLVVKSMGISNVNE----FLSSG-----------LDAPDKSSLDKANQFLHEIGALQEN 1012
Query: 185 EHLTPLGYHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAA 224
LT LG +++ LP DPQ K+L++ IF C+D T+AA
Sbjct: 1013 S-LTKLGNYISYLPTDPQSAKLLILGCIFGCLDICLTLAA 1051
Score = 84 (34.6 bits), Expect = 6.0e-39, Sum P(2) = 6.0e-39
Identities = 25/115 (21%), Positives = 48/115 (41%)
Query: 235 PMIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQ--GAKSDYV 292
P K+L++ IF C+D T+AA F +N + DK K I + + D++
Sbjct: 1028 PQSAKLLILGCIFGCLDICLTLAAISSTGSPF---INSYEQRDKLKQIQKKFGNGQGDFI 1084
Query: 293 VLINAMQGWEQALEHNYAHDYCRENFXXXXXXXXXRDMKDQFSRTMHEMNFISSR 347
+ NA + N + + EN+ + Q+ + E+ F++ +
Sbjct: 1085 SMANAYNAYMS----NKSKRFLTENYLSYTTIKDITSTRSQYLSLLVELGFVNRK 1135
>UNIPROTKB|Q5ADM3 [details] [associations]
symbol:CaO19.14110 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908 PROSITE:PS51194
SMART:SM00490 SMART:SM00591 SMART:SM00847 CGD:CAL0005664
GO:GO:0005524 GO:GO:0003676 Gene3D:3.10.110.10 InterPro:IPR016135
SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
EMBL:AACQ01000029 EMBL:AACQ01000028 RefSeq:XP_719795.1
RefSeq:XP_719912.1 ProteinModelPortal:Q5ADM3 GeneID:3638543
GeneID:3638643 KEGG:cal:CaO19.14110 KEGG:cal:CaO19.6818
Uniprot:Q5ADM3
Length = 1370
Score = 375 (137.1 bits), Expect = 6.0e-39, Sum P(2) = 6.0e-39
Identities = 91/220 (41%), Positives = 127/220 (57%)
Query: 9 FLQCP-SSGLKHLQNKSVFEL---GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFD 64
F+ P SGL + KS+F+ G RK+V++TNIAETSITI D V V+D GK+K FD
Sbjct: 848 FMALPLHSGLTSAEQKSIFKTAPKGKRKVVVSTNIAETSITIPDCVAVIDTGKSKNLFFD 907
Query: 65 VKDNIATLKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDE 124
K N L W S A +QRRGRAGRV G CYHLY++ + Q P+PEI+RTRL+
Sbjct: 908 HKLNTTKLIESWCSQAEVRQRRGRAGRVTAGTCYHLYTKETFEAMQKQPIPEIKRTRLEN 967
Query: 125 VVRTLESKKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDD 184
+ ++S V+ L++ LD PD +S+ + + L I AL ++
Sbjct: 968 LYLVVKSMGISNVNE----FLSSG-----------LDAPDKSSLDKANQFLHEIGALQEN 1012
Query: 185 EHLTPLGYHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAA 224
LT LG +++ LP DPQ K+L++ IF C+D T+AA
Sbjct: 1013 S-LTKLGNYISYLPTDPQSAKLLILGCIFGCLDICLTLAA 1051
Score = 84 (34.6 bits), Expect = 6.0e-39, Sum P(2) = 6.0e-39
Identities = 25/115 (21%), Positives = 48/115 (41%)
Query: 235 PMIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQ--GAKSDYV 292
P K+L++ IF C+D T+AA F +N + DK K I + + D++
Sbjct: 1028 PQSAKLLILGCIFGCLDICLTLAAISSTGSPF---INSYEQRDKLKQIQKKFGNGQGDFI 1084
Query: 293 VLINAMQGWEQALEHNYAHDYCRENFXXXXXXXXXRDMKDQFSRTMHEMNFISSR 347
+ NA + N + + EN+ + Q+ + E+ F++ +
Sbjct: 1085 SMANAYNAYMS----NKSKRFLTENYLSYTTIKDITSTRSQYLSLLVELGFVNRK 1135
>UNIPROTKB|E1C9G0 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00642 Pfam:PF04408 Pfam:PF05773
PROSITE:PS50103 PROSITE:PS51194 SMART:SM00356 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074257 OMA:RAYKGWQ
EMBL:AADN02041257 EMBL:AADN02041258 EMBL:AADN02041259
EMBL:AADN02041260 IPI:IPI00679513 Ensembl:ENSGALT00000023376
Uniprot:E1C9G0
Length = 1380
Score = 429 (156.1 bits), Expect = 6.1e-39, P = 6.1e-39
Identities = 99/226 (43%), Positives = 140/226 (61%)
Query: 15 SGLKHLQNKSVF---ELGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIAT 71
S L + +SVF GV KI+++TNIAETS+TIDD+VYV+D GK K +D + +
Sbjct: 881 SSLSSEEQQSVFLRPPAGVIKIIISTNIAETSVTIDDVVYVIDSGKMKEKRYDPSKGMES 940
Query: 72 LKPEWISLANAKQRRGRAGRVQEGVCYHLYS--RAREQTFQDYPLPEIQRTRLDEVVRTL 129
L+ ++S ANA QR+GRAGRV GVC+HL+S Q + LPEIQR L+++ L
Sbjct: 941 LEDTFVSRANALQRKGRAGRVASGVCFHLFSSHHYNHQLIKQQ-LPEIQRVPLEQLC--L 997
Query: 130 ESKKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTP 189
K +M S + L++ + ++++PP S++ S L+ + AL DE LTP
Sbjct: 998 RIKILEMFSAQ---SLHSVLS-------RLIEPPRTESLRASKLRLQDLGALTADEKLTP 1047
Query: 190 LGYHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCP 235
LGYHLA LP+D +IGK++L +IF C+DP T+AASL FK F P
Sbjct: 1048 LGYHLASLPVDVRIGKLMLFGTIFRCLDPALTIAASLAFKSPFVSP 1093
Score = 201 (75.8 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 39/110 (35%), Positives = 63/110 (57%)
Query: 237 IGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQGAKSDYVVLIN 296
IGK++L +IF C+DP T+AASL FK F P + ++ +K+K A G SDY+ L+
Sbjct: 1061 IGKLMLFGTIFRCLDPALTIAASLAFKSPFVSPWDKREEANKKKLDFAVG-NSDYLALLQ 1119
Query: 297 AMQGWEQALEHNY--AHDYCRENFXXXXXXXXXRDMKDQFSRTMHEMNFI 344
A +GW + + +++YCRENF +K QF+ + ++ F+
Sbjct: 1120 AYKGWRLSTKEGSQASYNYCRENFLSGRVLQEIASLKRQFTELLSDIGFV 1169
Score = 40 (19.1 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 12/44 (27%), Positives = 22/44 (50%)
Query: 119 RTRLDEVVRTLESKKFKMVSRRFKVMLNTAFTPYVWVPKQ-VLD 161
++ +E V+ + K SRRF+ ML+ W ++ +LD
Sbjct: 505 KSTYNENVKICMQFRLKKSSRRFQSMLHERQKLPAWQERETILD 548
>UNIPROTKB|J3KR71 [details] [associations]
symbol:DHX34 "Probable ATP-dependent RNA helicase DHX34"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AC008754 HGNC:HGNC:16719
ChiTaRS:DHX34 ProteinModelPortal:J3KR71 Ensembl:ENST00000466298
Uniprot:J3KR71
Length = 576
Score = 268 (99.4 bits), Expect = 6.8e-39, Sum P(2) = 6.8e-39
Identities = 54/111 (48%), Positives = 77/111 (69%)
Query: 24 SVFEL---GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLA 80
+VF++ GVRK +L+TNIAETS+TID I +VVD GK K ++D + + L+ WIS A
Sbjct: 339 TVFDVAPPGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQA 398
Query: 81 NAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDEVVRTLES 131
+A+QR+GRAGR GVC+ LY+ + F YP+PEI+R LD +V ++S
Sbjct: 399 SAEQRKGRAGRTGPGVCFRLYAESDYDAFAPYPVPEIRRVALDSLVLQMKS 449
Score = 179 (68.1 bits), Expect = 6.8e-39, Sum P(2) = 6.8e-39
Identities = 36/73 (49%), Positives = 52/73 (71%)
Query: 160 LDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKMLLMASIFSCVDPV 219
++PP PAS++ ++ LR ALD E LTP+G LA+LP+D IGKML++ S+FS V+PV
Sbjct: 461 IEPPPPASLETAILYLRDQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFSLVEPV 520
Query: 220 FTVAASLGFKDAF 232
T+AA+L + F
Sbjct: 521 LTIAAALSVQSPF 533
Score = 86 (35.3 bits), Expect = 3.8e-29, Sum P(2) = 3.8e-29
Identities = 16/31 (51%), Positives = 24/31 (77%)
Query: 236 MIGKMLLMASIFSCVDPVFTVAASLGFKDAF 266
+IGKML++ S+FS V+PV T+AA+L + F
Sbjct: 503 VIGKMLILGSMFSLVEPVLTIAAALSVQSPF 533
>UNIPROTKB|F1RLG0 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR002110 InterPro:IPR001650
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS50088
PROSITE:PS51194 SMART:SM00248 SMART:SM00490 SMART:SM00847
GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676 GO:GO:0004386
InterPro:IPR014001 PROSITE:PS51192 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 OMA:RAFWESS EMBL:CU462841
Ensembl:ENSSSCT00000015529 Uniprot:F1RLG0
Length = 1151
Score = 426 (155.0 bits), Expect = 9.1e-39, P = 9.1e-39
Identities = 95/234 (40%), Positives = 142/234 (60%)
Query: 5 FQIWFLQCPSSGLKHLQNKSVFE---LGVRKIVLATNIAETSITIDDIVYVVDCGKTKMS 61
+Q++ L S ++ K V + GVRKI+L+TNIAETSIT++D+V+V+D GK K
Sbjct: 377 YQVFMLH---SNMQTSDQKKVLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEK 433
Query: 62 NFDVKDNIATLKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTR 121
+FD + + LK WIS A+A QR+GRAGR + G+C+ L+SR R Q ++ PE+ R
Sbjct: 434 SFDALNFVTMLKMVWISKASAIQRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMP 493
Query: 122 LDEVVRTLESKKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDAL 181
L E+ L +K V+ L A P +PP V+ ++++L+ IDA+
Sbjct: 494 LQELC--LHTKLLAPVNCPIADFLMKA-------P----EPPPALIVRNAVQMLKTIDAM 540
Query: 182 DDDEHLTPLGYHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCP 235
D E LT LGYHLA LP++P +GKM+L A + C+DP+ T+A +L ++D F P
Sbjct: 541 DAWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVLP 594
Score = 157 (60.3 bits), Expect = 6.1e-08, P = 6.1e-08
Identities = 43/167 (25%), Positives = 72/167 (43%)
Query: 189 PLGYHLAKLPLDPQ---IGKMLLMASIFSCVDPVFTVAASLGFK--DAFYCPMIGKMLLM 243
P+ L K P P + + M +D + LG+ D P +GKM+L
Sbjct: 510 PIADFLMKAPEPPPALIVRNAVQMLKTIDAMD-AWEDLTELGYHLADLPVEPHLGKMVLC 568
Query: 244 ASIFSCVDPVFTVAASLGFKDAFYCPMNM-EKDVDK--QKNILAQGAKSDYVVLINAMQG 300
A + C+DP+ T+A +L ++D F P +K +K A G SD++ L+ A Q
Sbjct: 569 AVVLKCLDPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRFTA-GTFSDHMALLRAFQA 627
Query: 301 WEQALEHNYAHDYCRENFXXXXXXXXXRDMKDQFSRTMHEMNFISSR 347
W++A + +C +NF M+ Q + F+ +R
Sbjct: 628 WQKARSDGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRAR 674
>UNIPROTKB|E2QZR7 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 GO:GO:0008026
InterPro:IPR007275 Pfam:PF04146 PROSITE:PS50882 OMA:RAFWESS
EMBL:AAEX03007702 Ensembl:ENSCAFT00000000357 Uniprot:E2QZR7
Length = 1376
Score = 427 (155.4 bits), Expect = 1.0e-38, P = 1.0e-38
Identities = 95/234 (40%), Positives = 142/234 (60%)
Query: 5 FQIWFLQCPSSGLKHLQNKSVFE---LGVRKIVLATNIAETSITIDDIVYVVDCGKTKMS 61
+Q++ L S ++ K V + GVRKI+L+TNIAETSIT++D+V+V+D GK K
Sbjct: 656 YQVFMLH---SNMQTSDQKKVLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEK 712
Query: 62 NFDVKDNIATLKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTR 121
+FD + + LK WIS A+A QR+GRAGR + G+C+ L+SR R Q ++ PE+ R
Sbjct: 713 SFDALNFVTMLKMVWISKASAVQRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMP 772
Query: 122 LDEVVRTLESKKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDAL 181
L E+ L +K V+ L A P +PP V+ ++++L+ IDA+
Sbjct: 773 LQELC--LHTKLLAPVNCPIADFLMKA-------P----EPPPALIVRNAVQMLKTIDAM 819
Query: 182 DDDEHLTPLGYHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCP 235
D E LT LGYHLA LP++P +GKM+L A + C+DP+ T+A +L ++D F P
Sbjct: 820 DAWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVLP 873
Score = 157 (60.3 bits), Expect = 7.6e-08, P = 7.6e-08
Identities = 43/167 (25%), Positives = 72/167 (43%)
Query: 189 PLGYHLAKLPLDPQ---IGKMLLMASIFSCVDPVFTVAASLGFK--DAFYCPMIGKMLLM 243
P+ L K P P + + M +D + LG+ D P +GKM+L
Sbjct: 789 PIADFLMKAPEPPPALIVRNAVQMLKTIDAMD-AWEDLTELGYHLADLPVEPHLGKMVLC 847
Query: 244 ASIFSCVDPVFTVAASLGFKDAFYCPMNM-EKDVDK--QKNILAQGAKSDYVVLINAMQG 300
A + C+DP+ T+A +L ++D F P +K +K A G SD++ L+ A Q
Sbjct: 848 AVVLKCLDPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRFTA-GTFSDHMALLRAFQA 906
Query: 301 WEQALEHNYAHDYCRENFXXXXXXXXXRDMKDQFSRTMHEMNFISSR 347
W++A + +C +NF M+ Q + F+ +R
Sbjct: 907 WQKARSDGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRAR 953
>UNIPROTKB|Q9H6S0 [details] [associations]
symbol:YTHDC2 "Probable ATP-dependent RNA helicase YTHDC2"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50088 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00248 SMART:SM00490 SMART:SM00847
GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 EMBL:AC093208 EMBL:AC010389 EMBL:BC137285
EMBL:AK025593 IPI:IPI00010200 RefSeq:NP_073739.3 UniGene:Hs.231942
PDB:2YU6 PDBsum:2YU6 ProteinModelPortal:Q9H6S0 SMR:Q9H6S0
IntAct:Q9H6S0 PhosphoSite:Q9H6S0 DMDM:239938805 PaxDb:Q9H6S0
PeptideAtlas:Q9H6S0 PRIDE:Q9H6S0 Ensembl:ENST00000161863
GeneID:64848 KEGG:hsa:64848 UCSC:uc003kqn.3 CTD:64848
GeneCards:GC05P112877 HGNC:HGNC:24721 HPA:HPA037364
neXtProt:NX_Q9H6S0 PharmGKB:PA134912676 HOGENOM:HOG000155703
HOVERGEN:HBG063891 InParanoid:Q9H6S0 OMA:RAFWESS OrthoDB:EOG4JWVCN
PhylomeDB:Q9H6S0 EvolutionaryTrace:Q9H6S0 GenomeRNAi:64848
NextBio:66962 ArrayExpress:Q9H6S0 Bgee:Q9H6S0 CleanEx:HS_YTHDC2
Genevestigator:Q9H6S0 GermOnline:ENSG00000047188 Uniprot:Q9H6S0
Length = 1430
Score = 427 (155.4 bits), Expect = 1.1e-38, P = 1.1e-38
Identities = 95/234 (40%), Positives = 142/234 (60%)
Query: 5 FQIWFLQCPSSGLKHLQNKSVFE---LGVRKIVLATNIAETSITIDDIVYVVDCGKTKMS 61
+Q++ L S ++ K V + GVRKI+L+TNIAETSIT++D+V+V+D GK K
Sbjct: 656 YQVFMLH---SNMQTSDQKKVLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEK 712
Query: 62 NFDVKDNIATLKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTR 121
+FD + + LK WIS A+A QR+GRAGR + G+C+ L+SR R Q ++ PE+ R
Sbjct: 713 SFDALNFVTMLKMVWISKASAIQRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMP 772
Query: 122 LDEVVRTLESKKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDAL 181
L E+ L +K V+ L A P +PP V+ ++++L+ IDA+
Sbjct: 773 LQELC--LHTKLLAPVNCPIADFLMKA-------P----EPPPALIVRNAVQMLKTIDAM 819
Query: 182 DDDEHLTPLGYHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCP 235
D E LT LGYHLA LP++P +GKM+L A + C+DP+ T+A +L ++D F P
Sbjct: 820 DTWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVLP 873
Score = 161 (61.7 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 44/166 (26%), Positives = 73/166 (43%)
Query: 189 PLGYHLAKLPLDPQIGKMLLMASIFSCVDPVFTVA--ASLGFK--DAFYCPMIGKMLLMA 244
P+ L K P P + + +D + T LG+ D P +GKM+L A
Sbjct: 789 PIADFLMKAPEPPPALIVRNAVQMLKTIDAMDTWEDLTELGYHLADLPVEPHLGKMVLCA 848
Query: 245 SIFSCVDPVFTVAASLGFKDAFYCPMNM-EKDVDK--QKNILAQGAKSDYVVLINAMQGW 301
+ C+DP+ T+A +L ++D F P +K +K A GA SD++ L+ A Q W
Sbjct: 849 VVLKCLDPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRFTA-GAFSDHMALLRAFQAW 907
Query: 302 EQALEHNYAHDYCRENFXXXXXXXXXRDMKDQFSRTMHEMNFISSR 347
++A + +C +NF M+ Q + F+ +R
Sbjct: 908 QKARSDGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRAR 953
>MGI|MGI:2448561 [details] [associations]
symbol:Ythdc2 "YTH domain containing 2" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50088 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00248 SMART:SM00490 SMART:SM00847
MGI:MGI:2448561 GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146 PROSITE:PS50882
CTD:64848 HOGENOM:HOG000155703 OMA:RAFWESS OrthoDB:EOG4JWVCN
EMBL:BC138263 EMBL:BC171951 IPI:IPI00343249 RefSeq:NP_001156485.1
UniGene:Mm.244482 ProteinModelPortal:B2RR83 SMR:B2RR83
PhosphoSite:B2RR83 PaxDb:B2RR83 PRIDE:B2RR83
Ensembl:ENSMUST00000037763 GeneID:240255 KEGG:mmu:240255
UCSC:uc008evb.2 InParanoid:B2RR83 ChiTaRS:YTHDC2 NextBio:384522
Bgee:B2RR83 Genevestigator:B2RR83 Uniprot:B2RR83
Length = 1445
Score = 427 (155.4 bits), Expect = 1.1e-38, P = 1.1e-38
Identities = 95/234 (40%), Positives = 142/234 (60%)
Query: 5 FQIWFLQCPSSGLKHLQNKSVFE---LGVRKIVLATNIAETSITIDDIVYVVDCGKTKMS 61
+Q++ L S ++ K V + GVRKI+L+TNIAETSIT++D+V+V+D GK K
Sbjct: 671 YQVFMLH---SNMQTSDQKKVLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEK 727
Query: 62 NFDVKDNIATLKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTR 121
+FD + + LK WIS A+A QR+GRAGR + G+C+ L+SR R Q ++ PE+ R
Sbjct: 728 SFDALNFVTMLKMVWISKASAIQRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMP 787
Query: 122 LDEVVRTLESKKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDAL 181
L E+ L +K V+ L A P +PP V+ ++++L+ IDA+
Sbjct: 788 LQELC--LHTKLLAPVNCTIADFLMKA-------P----EPPPALIVRNAVQMLKTIDAM 834
Query: 182 DDDEHLTPLGYHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCP 235
D E LT LGYHLA LP++P +GKM+L A + C+DP+ T+A +L ++D F P
Sbjct: 835 DAWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVLP 888
Score = 156 (60.0 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 33/116 (28%), Positives = 56/116 (48%)
Query: 235 PMIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNM-EKDVDK--QKNILAQGAKSDY 291
P +GKM+L A + C+DP+ T+A +L ++D F P +K +K A G SD+
Sbjct: 854 PHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRFTA-GTFSDH 912
Query: 292 VVLINAMQGWEQALEHNYAHDYCRENFXXXXXXXXXRDMKDQFSRTMHEMNFISSR 347
+ L+ A Q W++A + +C +NF M+ Q + F+ +R
Sbjct: 913 MALLRAFQAWQKARSDGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRAR 968
>TAIR|locus:2052841 [details] [associations]
symbol:HVT1 "helicase in vascular tissue and tapetum"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA;ISS] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;ISS] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000226 "microtubule
cytoskeleton organization" evidence=RCA] [GO:0000911 "cytokinesis
by cell plate formation" evidence=RCA] InterPro:IPR001374
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF01424 Pfam:PF04408 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00393 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 EMBL:CP002685 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 IPI:IPI00521007
RefSeq:NP_850154.2 UniGene:At.19969 ProteinModelPortal:F4INY4
SMR:F4INY4 PRIDE:F4INY4 EnsemblPlants:AT2G30800.1 GeneID:817631
KEGG:ath:AT2G30800 OMA:PYNNVST Uniprot:F4INY4
Length = 1299
Score = 426 (155.0 bits), Expect = 1.1e-38, P = 1.1e-38
Identities = 92/219 (42%), Positives = 135/219 (61%)
Query: 21 QNKSVFEL---GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWI 77
+ K VF G RKIVLATNIAE+++TIDD+VYV+D G+ K ++D +N++TL+ W+
Sbjct: 596 EQKKVFNRPPPGCRKIVLATNIAESAVTIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWV 655
Query: 78 SLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMV 137
S ANAKQR+GRAGR Q G+CYHLYSR R + D+ +PEI+R ++E+ + K++
Sbjct: 656 SKANAKQRQGRAGRCQPGICYHLYSRLRAASMPDFKVPEIKRMPVEELCLQV-----KIL 710
Query: 138 SRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKL 197
K ++ +++LDPP S+ +L +L+ I AL E LT LG L
Sbjct: 711 DPNCKT------NDFL---QKLLDPPVDQSIANALSILQDIGALTPQEELTELGEKFGHL 761
Query: 198 PLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPM 236
P+ P I KML A + +C+DP T+A + +K+ F PM
Sbjct: 762 PVHPLISKMLFFAVLVNCLDPALTLACAADYKEPFTMPM 800
Score = 129 (50.5 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 38/156 (24%), Positives = 66/156 (42%)
Query: 198 PLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAFYC--PMIGKMLLMASIFSCVDPVFT 255
P+D I L + + P + LG K P+I KML A + +C+DP T
Sbjct: 727 PVDQSIANALSILQDIGALTPQEELT-ELGEKFGHLPVHPLISKMLFFAVLVNCLDPALT 785
Query: 256 VAASLGFKDAFYCPMNMEKDVDKQKNILAQ-------GAKSDYVVLINAMQGWEQALEHN 308
+A + +K+ F PM+ V++QK A+ G SD++ ++ A + W+ A
Sbjct: 786 LACAADYKEPFTMPMS---PVERQKAAAAKLELASLCGGDSDHLAVVAAFECWKNAKGRG 842
Query: 309 YAHDYCRENFXXXXXXXXXRDMKDQFSRTMHEMNFI 344
+ ++C + F M+ Q + I
Sbjct: 843 LSAEFCSQYFVSPSAMKMLDQMRSQLESELKRHGII 878
>TAIR|locus:2009200 [details] [associations]
symbol:NIH "nuclear DEIH-boxhelicase" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003678
"DNA helicase activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006259 "DNA metabolic process" evidence=ISS]
InterPro:IPR002110 InterPro:IPR001374 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF01424 Pfam:PF04408 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 PROSITE:PS50297
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0008026 IPI:IPI00521146 RefSeq:NP_172152.1 UniGene:At.20810
PRIDE:F4IDQ6 EnsemblPlants:AT1G06670.1 GeneID:837177
KEGG:ath:AT1G06670 OMA:GNMEENT Uniprot:F4IDQ6
Length = 1576
Score = 416 (151.5 bits), Expect = 2.2e-38, Sum P(2) = 2.2e-38
Identities = 90/232 (38%), Positives = 140/232 (60%)
Query: 8 WFLQCPSSGLKHLQNKSVFEL---GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFD 64
+ + C S + + K VF G RKIVLATNIAE+++TIDD+VYV+D G+ K ++D
Sbjct: 607 FIILCLHSRVPAEEQKKVFNRPPRGCRKIVLATNIAESAVTIDDVVYVIDSGRMKEKSYD 666
Query: 65 VKDNIATLKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDE 124
++++TL+ W+S ANAKQR GRAGR Q G+CYHLYS+ R + +Y +PE+ R +DE
Sbjct: 667 PYNDVSTLQSSWVSKANAKQRAGRAGRCQAGICYHLYSKLRAASLPEYRVPEVMRMPVDE 726
Query: 125 VVRTLESKKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDD 184
+ + KM+ V ++ ++++DPP S++ +L +L+ I AL +
Sbjct: 727 LCLQV-----KMLDPNCNV------NDFL---QKLMDPPVAQSIENALIILKDIGALTPE 772
Query: 185 EHLTPLGYHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPM 236
E LT LG +LP+ P+I KM+ A + +C+DP +A + KD F P+
Sbjct: 773 EELTELGQKFGQLPVHPRISKMIYFAILVNCLDPALILACAADEKDPFTMPL 824
Score = 39 (18.8 bits), Expect = 2.2e-38, Sum P(2) = 2.2e-38
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 271 NMEKDVDKQKNILAQGAKSDYV 292
NME+ + N+L+QG KS +
Sbjct: 1546 NMEEKMPST-NVLSQGNKSGLI 1566
>UNIPROTKB|E1BJ90 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00355 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:DSDQVFH GeneTree:ENSGT00700000104421
EMBL:DAAA02047415 IPI:IPI00713665 UniGene:Bt.42016
Ensembl:ENSBTAT00000008999 NextBio:20867826 Uniprot:E1BJ90
Length = 1146
Score = 273 (101.2 bits), Expect = 2.8e-38, Sum P(3) = 2.8e-38
Identities = 58/129 (44%), Positives = 81/129 (62%)
Query: 6 QIWFLQCPSSGLKHLQNKSVFEL---GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSN 62
Q W + S L VF++ GVRK +L+TNIAETS+TID I +VVD GK K +
Sbjct: 406 QRWVVLPLHSALSVADQDKVFDVAPPGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMS 465
Query: 63 FDVKDNIATLKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRL 122
+D + + L+ WIS A+A+QR+GRAGR GVC+ LY+ + F YP+PEI+R L
Sbjct: 466 YDPQAKLQRLQEFWISQASAEQRKGRAGRTGPGVCFRLYAESDYDAFAPYPVPEIRRVAL 525
Query: 123 DEVVRTLES 131
D +V ++S
Sbjct: 526 DALVLQMKS 534
Score = 165 (63.1 bits), Expect = 2.8e-38, Sum P(3) = 2.8e-38
Identities = 33/73 (45%), Positives = 49/73 (67%)
Query: 160 LDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKMLLMASIFSCVDPV 219
++PP P S++ ++ LR ALD E LTP+G LA+LP+D IGKML++ S+F +PV
Sbjct: 546 IEPPPPTSLETAILYLRDQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFHLAEPV 605
Query: 220 FTVAASLGFKDAF 232
T+AA+L + F
Sbjct: 606 LTIAAALSVQTPF 618
Score = 91 (37.1 bits), Expect = 4.4e-29, Sum P(2) = 4.4e-29
Identities = 24/112 (21%), Positives = 46/112 (41%)
Query: 236 MIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQGAKSDYVVLI 295
+IGKML++ S+F +PV T+AA+L + F + + L + + D L+
Sbjct: 588 VIGKMLILGSMFHLAEPVLTIAAALSVQTPFTRSAQSNPECAATRRPL-ESDQGDPFTLL 646
Query: 296 NAMQGWEQALEHN--YAHDYCRENFXXXXXXXXXRDMKDQFSRTMHEMNFIS 345
N W Q + +CR +++ QF + + ++
Sbjct: 647 NVFNTWVQVKSERGRNSRKWCRHRGIEEHRLYEMANLRRQFKELLEDHGLLA 698
Score = 37 (18.1 bits), Expect = 2.8e-38, Sum P(3) = 2.8e-38
Identities = 6/11 (54%), Positives = 7/11 (63%)
Query: 301 WEQALEHNYAH 311
WE AL+ AH
Sbjct: 950 WESALDRQLAH 960
>MGI|MGI:1918973 [details] [associations]
symbol:Dhx34 "DEAH (Asp-Glu-Ala-His) box polypeptide 34"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005622
"intracellular" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00355 SMART:SM00490 SMART:SM00847
MGI:MGI:1918973 GO:GO:0005524 GO:GO:0008270 GO:GO:0003723
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
CTD:9704 HOGENOM:HOG000232193 ChiTaRS:DHX34 EMBL:AK129062
EMBL:AK004733 IPI:IPI00113303 RefSeq:NP_082159.3 UniGene:Mm.75259
ProteinModelPortal:Q9DBV3 SMR:Q9DBV3 PhosphoSite:Q9DBV3
PaxDb:Q9DBV3 PRIDE:Q9DBV3 Ensembl:ENSMUST00000094816
Ensembl:ENSMUST00000163968 GeneID:71723 KEGG:mmu:71723
GeneTree:ENSGT00700000104421 HOVERGEN:HBG051355 NextBio:334335
Bgee:Q9DBV3 CleanEx:MM_DHX34 Genevestigator:Q9DBV3
GermOnline:ENSMUSG00000006019 Uniprot:Q9DBV3
Length = 1145
Score = 276 (102.2 bits), Expect = 3.3e-38, Sum P(2) = 3.3e-38
Identities = 59/129 (45%), Positives = 81/129 (62%)
Query: 6 QIWFLQCPSSGLKHLQNKSVFEL---GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSN 62
Q W + S L VF++ GVRK +L+TNIAETS+TID I +VVD GK K +
Sbjct: 408 QRWVVLPLHSALSVSDQDKVFDVAPAGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMS 467
Query: 63 FDVKDNIATLKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRL 122
+D + + L+ WIS A+A+QR+GRAGR GVCY LY+ + F YP+PEI+R L
Sbjct: 468 YDPQAKLQRLQEFWISQASAEQRKGRAGRTGPGVCYRLYAESDYDAFAPYPVPEIRRVAL 527
Query: 123 DEVVRTLES 131
D +V ++S
Sbjct: 528 DALVLQMKS 536
Score = 175 (66.7 bits), Expect = 3.3e-38, Sum P(2) = 3.3e-38
Identities = 35/73 (47%), Positives = 51/73 (69%)
Query: 160 LDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKMLLMASIFSCVDPV 219
++PP PASV+ ++ L+ ALD E LTP+G LA+LP+D IGKML++ S+FS +PV
Sbjct: 548 IEPPPPASVETAILYLQEQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFSLAEPV 607
Query: 220 FTVAASLGFKDAF 232
T+AA+L + F
Sbjct: 608 LTIAAALSVQSPF 620
Score = 104 (41.7 bits), Expect = 9.3e-31, Sum P(2) = 9.3e-31
Identities = 27/112 (24%), Positives = 46/112 (41%)
Query: 236 MIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQGAKSDYVVLI 295
+IGKML++ S+FS +PV T+AA+L + F D + L + + D L
Sbjct: 590 VIGKMLILGSMFSLAEPVLTIAAALSVQSPFTRSAQSNLDCATARRPL-ESDQGDPFTLF 648
Query: 296 NAMQGWEQALEHNYAHD--YCRENFXXXXXXXXXRDMKDQFSRTMHEMNFIS 345
N W Q + +CR +++ QF + + +S
Sbjct: 649 NVFNAWVQVKSERSGNSRKWCRRRGVEEHRLYEMANLRRQFKELLEDHGLLS 700
>ZFIN|ZDB-GENE-061207-30 [details] [associations]
symbol:dhx34 "DEAH (Asp-Glu-Ala-His) box polypeptide
34" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IMP] [GO:0009790 "embryo
development" evidence=IMP] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR015880
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00355
SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-061207-30 GO:GO:0005524
GO:GO:0000184 GO:GO:0008270 GO:GO:0003676 GO:GO:0005622
GO:GO:0009790 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
CTD:9704 HOGENOM:HOG000232193 OMA:DSDQVFH OrthoDB:EOG4GB75B
GeneTree:ENSGT00700000104421 HOVERGEN:HBG051355 EMBL:BX908775
IPI:IPI00503372 RefSeq:NP_001121805.1 UniGene:Dr.50626
Ensembl:ENSDART00000086943 GeneID:555838 KEGG:dre:555838
InParanoid:A2BIE5 NextBio:20881188 Uniprot:A2BIE5
Length = 1150
Score = 284 (105.0 bits), Expect = 5.3e-38, Sum P(2) = 5.3e-38
Identities = 59/129 (45%), Positives = 81/129 (62%)
Query: 6 QIWFLQCPSSGLKHLQNKSVFEL---GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSN 62
Q W + S L Q VF++ GVRK +++TNIAETS+TID + +VVD GK K +
Sbjct: 406 QRWIVLPLHSTLSLAQQDKVFDIAPPGVRKCIISTNIAETSVTIDGVRFVVDSGKVKEMS 465
Query: 63 FDVKDNIATLKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRL 122
FD K + L+ WIS A+++QR+GRAGR GVCY LYS + F YP+PEI R L
Sbjct: 466 FDPKAKMQRLQEFWISRASSEQRKGRAGRTGPGVCYRLYSESDYDAFAPYPVPEIHRVAL 525
Query: 123 DEVVRTLES 131
D ++ ++S
Sbjct: 526 DSLILQMKS 534
Score = 165 (63.1 bits), Expect = 5.3e-38, Sum P(2) = 5.3e-38
Identities = 34/73 (46%), Positives = 50/73 (68%)
Query: 160 LDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKMLLMASIFSCVDPV 219
+DPP +S+Q ++ LR ALD+ LT +G LA+LP+D IGKML++ S+F+ V+PV
Sbjct: 546 IDPPPASSIQTAVTYLREQGALDEHGELTSIGRLLAQLPVDVVIGKMLVLGSVFNLVEPV 605
Query: 220 FTVAASLGFKDAF 232
TVAA+L + F
Sbjct: 606 LTVAAALSVQSPF 618
Score = 101 (40.6 bits), Expect = 2.7e-31, Sum P(2) = 2.7e-31
Identities = 29/115 (25%), Positives = 47/115 (40%)
Query: 236 MIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQGAKSDYVVLI 295
+IGKML++ S+F+ V+PV TVAA+L + F D + L D L+
Sbjct: 588 VIGKMLVLGSVFNLVEPVLTVAAALSVQSPFLRSAQHNPDCSTARQPLNSN-HGDPFTLM 646
Query: 296 NAMQGWEQ--ALEHNYAHDYCRENFXXXXXXXXXRDMKDQFSRTMHEMNFISSRT 348
N W Q A + + +CR +++ QF + + T
Sbjct: 647 NTFNAWVQVKADRGSGSRKWCRRRGLEEQRLYEMVNLRRQFKELLRSHGLLEDDT 701
>UNIPROTKB|E1C388 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 CTD:54505 OMA:WLLYQEK
GeneTree:ENSGT00550000074257 EMBL:AADN02054528 EMBL:AADN02054529
EMBL:AADN02054530 IPI:IPI00580778 RefSeq:XP_424728.2
UniGene:Gga.12357 Ensembl:ENSGALT00000023700 GeneID:427136
KEGG:gga:427136 NextBio:20828443 Uniprot:E1C388
Length = 1372
Score = 415 (151.1 bits), Expect = 1.9e-37, P = 1.9e-37
Identities = 104/244 (42%), Positives = 149/244 (61%)
Query: 28 LGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRG 87
LGVRKIVLATNIAET ITI D+V+V+D G+TK + + +++L+ ++S A+A QR+G
Sbjct: 923 LGVRKIVLATNIAETGITIPDVVFVIDSGRTKENRYHESSQMSSLEETFVSKASALQRQG 982
Query: 88 RAGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNT 147
RAGRV++G C+ +Y+R R ++F +Y +PEI R L+E+ L K + S
Sbjct: 983 RAGRVRDGFCFRMYTRDRFESFMEYSVPEILRVPLEELC--LHIMKCNLGS--------- 1031
Query: 148 AFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDE-HLTPLGYHLAKLPLDPQIGKM 206
P ++ + LDPP P + ++ LLR I A +E LTPLG HLA LP++ +IGKM
Sbjct: 1032 ---PEDFLSR-ALDPPQPQVIGNAMNLLRKIGACQLNEPKLTPLGQHLAALPVNVKIGKM 1087
Query: 207 LLMASIFSCVDPVFTVAASLGFKDAFYCPMIGKM----LLMASIFSCVDPVFTVA-ASLG 261
L+ +IF C+DPV T+AA + K F P IG+ L +SI V T+ A LG
Sbjct: 1088 LIFGAIFGCLDPVATLAAVMTEKSPFTTP-IGRKDEADLAKSSIALAVSDHLTIYNAYLG 1146
Query: 262 FKDA 265
+K A
Sbjct: 1147 WKKA 1150
Score = 173 (66.0 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 52/161 (32%), Positives = 78/161 (48%)
Query: 198 PLDPQ-IGK-MLLMASIFSCV--DPVFTVAASLGFKDAFYCPM---IGKMLLMASIFSCV 250
P PQ IG M L+ I +C +P T LG + P+ IGKML+ +IF C+
Sbjct: 1042 PPQPQVIGNAMNLLRKIGACQLNEPKLT---PLG-QHLAALPVNVKIGKMLIFGAIFGCL 1097
Query: 251 DPVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQGAKSDYVVLINAMQGWEQALE---H 307
DPV T+AA + K F P+ + + D K+ +A A SD++ + NA GW++A + H
Sbjct: 1098 DPVATLAAVMTEKSPFTTPIGRKDEADLAKSSIAL-AVSDHLTIYNAYLGWKKARQEGGH 1156
Query: 308 NYAHDYCRENFXXXXXXXXXRDMKDQFSRTMHEMNFISSRT 348
YCR NF D+K + + + F + T
Sbjct: 1157 RAEMTYCRRNFLNRTSLLTLEDVKQELIKLVRAAGFTAPTT 1197
Score = 42 (19.8 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 10/29 (34%), Positives = 13/29 (44%)
Query: 157 KQVLDPPDPASVQLSLKLLRLIDALDDDE 185
K+ PP P L+L LL D +E
Sbjct: 331 KKKATPPQPQETTLNLSLLEKPDGTAKEE 359
>DICTYBASE|DDB_G0267516 [details] [associations]
symbol:dhx57 "RWD domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908
PROSITE:PS51194 SMART:SM00490 SMART:SM00591 SMART:SM00847
dictyBase:DDB_G0267516 GO:GO:0005524 GenomeReviews:CM000150_GR
EMBL:AAFI02000003 GO:GO:0003676 InterPro:IPR015940 PROSITE:PS50030
Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K13026
RefSeq:XP_647095.1 ProteinModelPortal:Q55GT9
EnsemblProtists:DDB0235268 GeneID:8615899 KEGG:ddi:DDB_G0267516
OMA:EVHERST Uniprot:Q55GT9
Length = 1451
Score = 413 (150.4 bits), Expect = 3.4e-37, P = 3.4e-37
Identities = 98/241 (40%), Positives = 134/241 (55%)
Query: 2 AIFFQIWFLQCPSSGLKHLQNKSVFEL---GVRKIVLATNIAETSITIDDIVYVVDCGKT 58
AI +IW + SS L + VFE G K+V+ATNIAETSITI+D+ VVDCG+
Sbjct: 927 AICQRIWCVPLHSS-LSPKDQQKVFEKAPNGRVKVVIATNIAETSITIEDVEIVVDCGRV 985
Query: 59 KMSNFDVKDNIATLKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYPLPEIQ 118
F+ + + EW S A+ +QR GRAGR G+C+ +++++ E QD PEI
Sbjct: 986 NQMTFNSITGNSVMSEEWTSKASCRQRAGRAGRTSSGLCFKVFTKSMESQLQDQDTPEIL 1045
Query: 119 RTRLDEVVRTLESKKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLI 178
RT L ++ L K F K NT ++ + ++PP +Q S+ L I
Sbjct: 1046 RTSLQQLC--LHVKLF------LKNNKNTTIQDFL---NRAIEPPSSEQIQSSINELISI 1094
Query: 179 DAL----DDDEHLTPLGYHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAFYC 234
DAL + LTPLGYHLA LP+D IGKMLL IF C+DP+ T+AA+L +K F
Sbjct: 1095 DALKINQQQQQELTPLGYHLASLPVDVYIGKMLLFGCIFRCLDPILTIAATLNYKSPFLN 1154
Query: 235 P 235
P
Sbjct: 1155 P 1155
Score = 182 (69.1 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 37/109 (33%), Positives = 60/109 (55%)
Query: 237 IGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNME-KDVDKQKNILAQGAKSDYVVLI 295
IGKMLL IF C+DP+ T+AA+L +K F P + + +DK + +SD+ LI
Sbjct: 1123 IGKMLLFGCIFRCLDPILTIAATLNYKSPFLNPPDKTIRPMDK----FSSPNQSDHQTLI 1178
Query: 296 NAMQGWEQALEHNYAHDYCRENFXXXXXXXXXRDMKDQFSRTMHEMNFI 344
NA W ++++ + +CREN+ +D+K QF + E+ F+
Sbjct: 1179 NAYNSWRKSIQDGNEYQFCRENYLSIPTLRTIQDLKLQFVEILSEIGFL 1227
>POMBASE|SPBC15C4.05 [details] [associations]
symbol:SPBC15C4.05 "ATP-dependent RNA/DNA helicase
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
PomBase:SPBC15C4.05 GO:GO:0005829 GO:GO:0005524 EMBL:CU329671
GO:GO:0003676 GO:GO:0004003 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 PIR:T39475 RefSeq:NP_595925.1
ProteinModelPortal:O60114 EnsemblFungi:SPBC15C4.05.1 GeneID:2539831
KEGG:spo:SPBC15C4.05 OrthoDB:EOG4TXG12 NextBio:20800979
Uniprot:O60114
Length = 1428
Score = 362 (132.5 bits), Expect = 5.5e-37, Sum P(2) = 5.5e-37
Identities = 88/222 (39%), Positives = 127/222 (57%)
Query: 15 SGLKHLQNKSVFEL---GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIAT 71
S L Q +SVF + G RKIVL+TNIAET +TI D+ V+D G + ++ + +++
Sbjct: 942 STLSSAQQQSVFNIPPKGCRKIVLSTNIAETGVTIPDVTCVIDTGVHREMRYNSRRHLSR 1001
Query: 72 LKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQT-FQDYPLPEIQRTRLDEVVRTLE 130
L ++S ANAKQR GRAGRVQEG+CYHL+S+ + T F Y PEI R L EVV L
Sbjct: 1002 LTDTFVSKANAKQRSGRAGRVQEGICYHLFSKFKHDTQFLSYQTPEILRLNLQEVV--LR 1059
Query: 131 SKKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPL 190
K +M + +L A LDPP ++ +L+ L + AL ++E LT L
Sbjct: 1060 VKMCQMGD--VQDVLGKA-----------LDPPSSTNIIRALEKLHQVGALSENEKLTKL 1106
Query: 191 GYHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAF 232
G L++LP+D +GK+L++ + CVD ++ A L F
Sbjct: 1107 GKFLSQLPVDANLGKILVLGCFYKCVDAASSIVAMLTIGSPF 1148
Score = 79 (32.9 bits), Expect = 5.5e-37, Sum P(2) = 5.5e-37
Identities = 22/114 (19%), Positives = 46/114 (40%)
Query: 237 IGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNILA-QGAKSDYVVLI 295
+GK+L++ + CVD ++ A L F ++ E +K + A + +SD V++
Sbjct: 1119 LGKILVLGCFYKCVDAASSIVAMLTIGSPFRKSVDNEFSANKARLSFAKENTRSDLVLMY 1178
Query: 296 NAMQGWEQALEHNYAHD---YCRENFXXXXXXXXXRDMKDQFSRTMHEMNFISS 346
A W + D + +E + +K Q + +M + +
Sbjct: 1179 YAYCAWREICLSPLGPDEDSFAKEKYLNLEALSMTESLKIQLLSELKDMKLLGA 1232
>UNIPROTKB|E2RTK4 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00355 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 EMBL:AAEX03000836
Ensembl:ENSCAFT00000006692 Uniprot:E2RTK4
Length = 1140
Score = 271 (100.5 bits), Expect = 9.8e-37, Sum P(2) = 9.8e-37
Identities = 58/129 (44%), Positives = 80/129 (62%)
Query: 6 QIWFLQCPSSGLKHLQNKSVFEL---GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSN 62
Q W + S L VF++ GVRK +L+TNIAETS+TID I +VVD GK K
Sbjct: 405 QRWVVLPLHSALSVADQDKVFDVAPPGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMG 464
Query: 63 FDVKDNIATLKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRL 122
+D + + L+ WIS A+A+QR+GRAGR GVC+ LY+ + F YP+PEI+R L
Sbjct: 465 YDPQAKLHRLQEFWISQASAEQRKGRAGRTGPGVCFRLYAESDYDAFAPYPVPEIRRVAL 524
Query: 123 DEVVRTLES 131
D +V ++S
Sbjct: 525 DALVLQMKS 533
Score = 166 (63.5 bits), Expect = 9.8e-37, Sum P(2) = 9.8e-37
Identities = 33/73 (45%), Positives = 50/73 (68%)
Query: 160 LDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKMLLMASIFSCVDPV 219
++PP PAS++ ++ L+ ALD E LTP+G LA+LP+D IGKML++ S+F +PV
Sbjct: 545 IEPPPPASLETAILYLQDQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFHLAEPV 604
Query: 220 FTVAASLGFKDAF 232
T+AA+L + F
Sbjct: 605 LTIAAALSVQSPF 617
Score = 92 (37.4 bits), Expect = 5.6e-29, Sum P(2) = 5.6e-29
Identities = 24/112 (21%), Positives = 45/112 (40%)
Query: 236 MIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQGAKSDYVVLI 295
+IGKML++ S+F +PV T+AA+L + F + + L + + D L
Sbjct: 587 VIGKMLILGSMFHLAEPVLTIAAALSVQSPFTRSAQSNPECAAARRPL-ESDQGDPFTLF 645
Query: 296 NAMQGWEQALEHNYAHD--YCRENFXXXXXXXXXRDMKDQFSRTMHEMNFIS 345
N W Q + +CR +++ QF + + ++
Sbjct: 646 NVFNAWVQVKSERSRNSRKWCRHRGIEEHRLYEMANLRRQFKELLEDHGLLA 697
>UNIPROTKB|E2RTK2 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00355 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 OMA:DSDQVFH
GeneTree:ENSGT00700000104421 EMBL:AAEX03000836
Ensembl:ENSCAFT00000006694 Uniprot:E2RTK2
Length = 1177
Score = 271 (100.5 bits), Expect = 1.1e-36, Sum P(2) = 1.1e-36
Identities = 58/129 (44%), Positives = 80/129 (62%)
Query: 6 QIWFLQCPSSGLKHLQNKSVFEL---GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSN 62
Q W + S L VF++ GVRK +L+TNIAETS+TID I +VVD GK K
Sbjct: 410 QRWVVLPLHSALSVADQDKVFDVAPPGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMG 469
Query: 63 FDVKDNIATLKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRL 122
+D + + L+ WIS A+A+QR+GRAGR GVC+ LY+ + F YP+PEI+R L
Sbjct: 470 YDPQAKLHRLQEFWISQASAEQRKGRAGRTGPGVCFRLYAESDYDAFAPYPVPEIRRVAL 529
Query: 123 DEVVRTLES 131
D +V ++S
Sbjct: 530 DALVLQMKS 538
Score = 166 (63.5 bits), Expect = 1.1e-36, Sum P(2) = 1.1e-36
Identities = 33/73 (45%), Positives = 50/73 (68%)
Query: 160 LDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKMLLMASIFSCVDPV 219
++PP PAS++ ++ L+ ALD E LTP+G LA+LP+D IGKML++ S+F +PV
Sbjct: 550 IEPPPPASLETAILYLQDQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFHLAEPV 609
Query: 220 FTVAASLGFKDAF 232
T+AA+L + F
Sbjct: 610 LTIAAALSVQSPF 622
Score = 92 (37.4 bits), Expect = 6.2e-29, Sum P(2) = 6.2e-29
Identities = 24/112 (21%), Positives = 45/112 (40%)
Query: 236 MIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQGAKSDYVVLI 295
+IGKML++ S+F +PV T+AA+L + F + + L + + D L
Sbjct: 592 VIGKMLILGSMFHLAEPVLTIAAALSVQSPFTRSAQSNPECAAARRPL-ESDQGDPFTLF 650
Query: 296 NAMQGWEQALEHNYAHD--YCRENFXXXXXXXXXRDMKDQFSRTMHEMNFIS 345
N W Q + +CR +++ QF + + ++
Sbjct: 651 NVFNAWVQVKSERSRNSRKWCRHRGIEEHRLYEMANLRRQFKELLEDHGLLA 702
>RGD|2318361 [details] [associations]
symbol:Dhx29 "DEAH (Asp-Glu-Ala-His) box polypeptide 29"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:2318361
GO:GO:0005739 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OrthoDB:EOG43FGW2 GeneTree:ENSGT00550000074257
IPI:IPI00372028 Ensembl:ENSRNOT00000013854 Uniprot:D3ZHW0
Length = 1366
Score = 402 (146.6 bits), Expect = 4.6e-36, P = 4.6e-36
Identities = 94/212 (44%), Positives = 133/212 (62%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
GVRKIVLATNIAET ITI D+V+V+D G+TK + + +++L ++S A+A QR+GR
Sbjct: 922 GVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGR 981
Query: 89 AGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNTA 148
AGRV++G C+ LY+R R + F +Y +PEI R L+E+ L K + S
Sbjct: 982 AGRVRDGFCFRLYTRERFEGFLEYSVPEILRVPLEELC--LHIMKCDLGS---------- 1029
Query: 149 FTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDE-HLTPLGYHLAKLPLDPQIGKML 207
P ++ K LDPP P + ++ LLR I A + E LTPLG HLA LP++ +IGKML
Sbjct: 1030 --PEDFLSK-ALDPPQPQVISNAMNLLRKIGACEPSEPKLTPLGQHLAALPVNVKIGKML 1086
Query: 208 LMASIFSCVDPVFTVAASLGFKDAFYCPMIGK 239
+ +IF C++PV T+AA + K F P IG+
Sbjct: 1087 IFGAIFGCLEPVATLAAVMTEKSPFITP-IGR 1117
Score = 183 (69.5 bits), Expect = 9.2e-11, P = 9.2e-11
Identities = 50/160 (31%), Positives = 79/160 (49%)
Query: 198 PLDPQI--GKMLLMASIFSCVDPVFTVAASLGFKDAFYCPM---IGKMLLMASIFSCVDP 252
P PQ+ M L+ I +C +P LG + P+ IGKML+ +IF C++P
Sbjct: 1040 PPQPQVISNAMNLLRKIGAC-EPSEPKLTPLG-QHLAALPVNVKIGKMLIFGAIFGCLEP 1097
Query: 253 VFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQGAKSDYVVLINAMQGWEQAL-EHNYAH 311
V T+AA + K F P+ + + D K+ LA A SD++ + NA GW++A E +
Sbjct: 1098 VATLAAVMTEKSPFITPIGRKDEADLAKSSLAV-ADSDHLTIYNAYLGWKKAQQEGGFRS 1156
Query: 312 D--YCRENFXXXXXXXXXRDMKDQFSRTMHEMNFISSRTW 349
+ YC+ NF D+K + + + F SS +W
Sbjct: 1157 EISYCQRNFLNRTSLLTLEDVKQELMKLVRAAGFSSSTSW 1196
>UNIPROTKB|E1B9N7 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 OMA:WLLYQEK GeneTree:ENSGT00550000074257
EMBL:DAAA02050346 IPI:IPI00907457 Ensembl:ENSBTAT00000013897
ArrayExpress:E1B9N7 Uniprot:E1B9N7
Length = 1367
Score = 399 (145.5 bits), Expect = 9.6e-36, P = 9.6e-36
Identities = 94/212 (44%), Positives = 133/212 (62%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
GVRKIVLATNIAET ITI D+V+V+D G+TK + + +++L ++S A+A QR+GR
Sbjct: 919 GVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGR 978
Query: 89 AGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNTA 148
AGRV++G C+ +Y+R R + F DY +PEI R L+E+ L K + S
Sbjct: 979 AGRVRDGFCFRMYTRERFEGFMDYSVPEILRVPLEELC--LHIMKCNLGS---------- 1026
Query: 149 FTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDE-HLTPLGYHLAKLPLDPQIGKML 207
P ++ K LDPP + ++ LLR I A + +E LTPLG HLA LP++ +IGKML
Sbjct: 1027 --PEDFLSK-ALDPPQLQVISNAMNLLRKIGACELNEPKLTPLGQHLAALPVNVKIGKML 1083
Query: 208 LMASIFSCVDPVFTVAASLGFKDAFYCPMIGK 239
+ +IF C+DPV T+AA + K F P IG+
Sbjct: 1084 IFGAIFGCLDPVATLAAVMTEKSPFITP-IGR 1114
Score = 189 (71.6 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 42/115 (36%), Positives = 63/115 (54%)
Query: 237 IGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQGAKSDYVVLIN 296
IGKML+ +IF C+DPV T+AA + K F P+ + + D K+ LA A SD++ + N
Sbjct: 1079 IGKMLIFGAIFGCLDPVATLAAVMTEKSPFITPIGRKDEADLAKSALAM-ADSDHLTIYN 1137
Query: 297 AMQGWEQAL-EHNYAHD--YCRENFXXXXXXXXXRDMKDQFSRTMHEMNFISSRT 348
A GW++A E Y + YCR+NF D+K + + + F+SS T
Sbjct: 1138 AYLGWKKARQEGGYRSEIAYCRKNFLNRTSLLTLEDVKQELIKLVKAAGFLSSTT 1192
>UNIPROTKB|Q7Z478 [details] [associations]
symbol:DHX29 "ATP-dependent RNA helicase DHX29"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005739
GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AY036974 EMBL:BC056219 EMBL:AL834496
EMBL:BX648101 EMBL:BX648269 EMBL:AL079292 EMBL:AF070639
IPI:IPI00217413 RefSeq:NP_061903.2 UniGene:Hs.740463
ProteinModelPortal:Q7Z478 SMR:Q7Z478 IntAct:Q7Z478
MINT:MINT-1376685 STRING:Q7Z478 PhosphoSite:Q7Z478 DMDM:110278938
PaxDb:Q7Z478 PeptideAtlas:Q7Z478 PRIDE:Q7Z478
Ensembl:ENST00000251636 GeneID:54505 KEGG:hsa:54505 UCSC:uc003jpx.3
CTD:54505 GeneCards:GC05M054552 H-InvDB:HIX0004866 HGNC:HGNC:15815
HPA:HPA038317 HPA:HPA038318 MIM:612720 neXtProt:NX_Q7Z478
PharmGKB:PA27215 HOGENOM:HOG000247063 HOVERGEN:HBG081436
InParanoid:Q7Z478 OMA:WLLYQEK OrthoDB:EOG43FGW2 PhylomeDB:Q7Z478
ChiTaRS:DHX29 GenomeRNAi:54505 NextBio:56869 Bgee:Q7Z478
CleanEx:HS_DHX29 Genevestigator:Q7Z478 GermOnline:ENSG00000067248
Uniprot:Q7Z478
Length = 1369
Score = 398 (145.2 bits), Expect = 1.2e-35, P = 1.2e-35
Identities = 94/212 (44%), Positives = 133/212 (62%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
GVRKIVLATNIAET ITI D+V+V+D G+TK + + +++L ++S A+A QR+GR
Sbjct: 922 GVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGR 981
Query: 89 AGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNTA 148
AGRV++G C+ +Y+R R + F DY +PEI R L+E+ L K + S
Sbjct: 982 AGRVRDGFCFRMYTRERFEGFMDYSVPEILRVPLEELC--LHIMKCNLGS---------- 1029
Query: 149 FTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDE-HLTPLGYHLAKLPLDPQIGKML 207
P ++ K LDPP + ++ LLR I A + +E LTPLG HLA LP++ +IGKML
Sbjct: 1030 --PEDFLSK-ALDPPQLQVISNAMNLLRKIGACELNEPKLTPLGQHLAALPVNVKIGKML 1086
Query: 208 LMASIFSCVDPVFTVAASLGFKDAFYCPMIGK 239
+ +IF C+DPV T+AA + K F P IG+
Sbjct: 1087 IFGAIFGCLDPVATLAAVMTEKSPFTTP-IGR 1117
Score = 183 (69.5 bits), Expect = 9.2e-11, P = 9.2e-11
Identities = 42/115 (36%), Positives = 61/115 (53%)
Query: 237 IGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQGAKSDYVVLIN 296
IGKML+ +IF C+DPV T+AA + K F P+ + + D K+ LA A SD++ + N
Sbjct: 1082 IGKMLIFGAIFGCLDPVATLAAVMTEKSPFTTPIGRKDEADLAKSALAM-ADSDHLTIYN 1140
Query: 297 AMQGWEQAL-EHNYAHD--YCRENFXXXXXXXXXRDMKDQFSRTMHEMNFISSRT 348
A GW++A E Y + YCR NF D+K + + + F SS T
Sbjct: 1141 AYLGWKKARQEGGYRSEITYCRRNFLNRTSLLTLEDVKQELIKLVKAAGFSSSTT 1195
>MGI|MGI:2145374 [details] [associations]
symbol:Dhx29 "DEAH (Asp-Glu-Ala-His) box polypeptide 29"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0006412 "translation"
evidence=IEA] [GO:0006413 "translational initiation" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:2145374
GO:GO:0005739 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 CTD:54505 HOGENOM:HOG000247063
HOVERGEN:HBG081436 OMA:WLLYQEK OrthoDB:EOG43FGW2 EMBL:BC057112
EMBL:BC082319 EMBL:AK028342 EMBL:AK042066 EMBL:AK042497
EMBL:AK049530 IPI:IPI00410936 RefSeq:NP_766182.2 UniGene:Mm.35094
ProteinModelPortal:Q6PGC1 SMR:Q6PGC1 STRING:Q6PGC1
PhosphoSite:Q6PGC1 PaxDb:Q6PGC1 PRIDE:Q6PGC1
Ensembl:ENSMUST00000038574 GeneID:218629 KEGG:mmu:218629
UCSC:uc007rwx.1 GeneTree:ENSGT00550000074257 InParanoid:Q6PGC1
NextBio:376359 Bgee:Q6PGC1 CleanEx:MM_DHX29 Genevestigator:Q6PGC1
GermOnline:ENSMUSG00000042426 Uniprot:Q6PGC1
Length = 1365
Score = 397 (144.8 bits), Expect = 1.6e-35, P = 1.6e-35
Identities = 94/212 (44%), Positives = 133/212 (62%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
GVRKIVLATNIAET ITI D+V+V+D G+TK + + +++L ++S A+A QR+GR
Sbjct: 921 GVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGR 980
Query: 89 AGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNTA 148
AGRV++G C+ LY+R R + F DY +PEI R L+E+ L K + S
Sbjct: 981 AGRVRDGFCFRLYTRERFEGFLDYSVPEILRVPLEELC--LHIMKCDLGS---------- 1028
Query: 149 FTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDE-HLTPLGYHLAKLPLDPQIGKML 207
P ++ K LDPP + ++ LLR I A + +E LTPLG HLA LP++ +IGKML
Sbjct: 1029 --PEDFLSK-ALDPPQLQVISNAMNLLRKIGACEPNEPKLTPLGQHLAALPVNVKIGKML 1085
Query: 208 LMASIFSCVDPVFTVAASLGFKDAFYCPMIGK 239
+ +IF C++PV T+AA + K F P IG+
Sbjct: 1086 IFGAIFGCLEPVATLAAVMTEKSPFITP-IGR 1116
Score = 176 (67.0 bits), Expect = 5.7e-10, P = 5.7e-10
Identities = 39/116 (33%), Positives = 62/116 (53%)
Query: 237 IGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQGAKSDYVVLIN 296
IGKML+ +IF C++PV T+AA + K F P+ + + D K+ LA A SD++ + N
Sbjct: 1081 IGKMLIFGAIFGCLEPVATLAAVMTEKSPFITPIGRKDEADLAKSSLAV-ADSDHLTIYN 1139
Query: 297 AMQGWEQAL-EHNYAHD--YCRENFXXXXXXXXXRDMKDQFSRTMHEMNFISSRTW 349
A GW++A E + + YC+ NF D+K + + + F SS +W
Sbjct: 1140 AYLGWKKAQQEGGFRSEISYCQRNFLNRTSLLTLEDVKQELMKLVKAAGFSSSPSW 1195
>UNIPROTKB|F1SLN0 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 EMBL:CU929534
Ensembl:ENSSSCT00000018413 Uniprot:F1SLN0
Length = 1367
Score = 397 (144.8 bits), Expect = 1.6e-35, P = 1.6e-35
Identities = 94/212 (44%), Positives = 133/212 (62%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
GVRKIVLATNIAET ITI D+V+V+D G+TK + + +++L ++S A+A QR+GR
Sbjct: 922 GVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGR 981
Query: 89 AGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNTA 148
AGRV++G C+ +Y+R R + F DY +PEI R L+E+ L K + S
Sbjct: 982 AGRVRDGFCFRMYTRERFEGFMDYSVPEILRVPLEELC--LHIMKCNLGS---------- 1029
Query: 149 FTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDE-HLTPLGYHLAKLPLDPQIGKML 207
P ++ K LDPP + ++ LLR I A + +E LTPLG HLA LP++ +IGKML
Sbjct: 1030 --PEDFLSK-ALDPPQLQVISNAMHLLRKIGACELNEPKLTPLGQHLAALPVNVKIGKML 1086
Query: 208 LMASIFSCVDPVFTVAASLGFKDAFYCPMIGK 239
+ +IF C+DPV T+AA + K F P IG+
Sbjct: 1087 IFGAIFGCLDPVATLAAVMTEKSPFTTP-IGR 1117
Score = 172 (65.6 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 41/116 (35%), Positives = 65/116 (56%)
Query: 237 IGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQGAKSDYVVLIN 296
IGKML+ +IF C+DPV T+AA + K F P+ + + D K+ LA A SD++ + N
Sbjct: 1082 IGKMLIFGAIFGCLDPVATLAAVMTEKSPFTTPIGRKDEADLAKSALAM-ADSDHLTIYN 1140
Query: 297 AMQGWEQAL-EHNYAHD--YCRENFXXXXXXXXXRDMKDQFSRTMHEMNFISSRTW 349
A GW++A E Y + YCR NF ++K + + T+ ++ F S +T+
Sbjct: 1141 AYLGWKKAQQEGGYRSEIAYCRRNFLNRTSLLTLEEIKRRRT-TLLKLIFYSIKTY 1195
Score = 47 (21.6 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 15/51 (29%), Positives = 25/51 (49%)
Query: 64 DVKDNIATLKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYPL 114
D+K+ AT K E K R+G+ QE + + R +T +D+P+
Sbjct: 269 DIKEQAATFKLE-------KNRQGQK-EAQEKI--RKFQRVEMETLEDHPV 309
>UNIPROTKB|E2RID8 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:54505
GeneTree:ENSGT00550000074257 EMBL:AAEX03001437 RefSeq:XP_535238.2
Ensembl:ENSCAFT00000010821 GeneID:478060 KEGG:cfa:478060
NextBio:20853441 Uniprot:E2RID8
Length = 1367
Score = 397 (144.8 bits), Expect = 1.6e-35, P = 1.6e-35
Identities = 94/212 (44%), Positives = 133/212 (62%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
GVRKIVLATNIAET ITI D+V+V+D G+TK + + +++L ++S A+A QR+GR
Sbjct: 919 GVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGR 978
Query: 89 AGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNTA 148
AGRV++G C+ +Y+R R + F DY +PEI R L+E+ L K + S
Sbjct: 979 AGRVRDGFCFRMYTRERFEGFMDYSVPEILRVPLEELC--LHIMKCNLGS---------- 1026
Query: 149 FTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEH-LTPLGYHLAKLPLDPQIGKML 207
P ++ K LDPP + ++ LLR I A + +E LTPLG HLA LP++ +IGKML
Sbjct: 1027 --PEDFLSK-ALDPPQLQVISNAMNLLRKIGACELNEPTLTPLGQHLAALPVNVKIGKML 1083
Query: 208 LMASIFSCVDPVFTVAASLGFKDAFYCPMIGK 239
+ +IF C+DPV T+AA + K F P IG+
Sbjct: 1084 IFGAIFGCLDPVATLAAVMTEKSPFTTP-IGR 1114
Score = 184 (69.8 bits), Expect = 7.1e-11, P = 7.1e-11
Identities = 42/115 (36%), Positives = 61/115 (53%)
Query: 237 IGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQGAKSDYVVLIN 296
IGKML+ +IF C+DPV T+AA + K F P+ + + D K+ LA A SD++ + N
Sbjct: 1079 IGKMLIFGAIFGCLDPVATLAAVMTEKSPFTTPIGRKDEADLAKSALAM-ADSDHLTIYN 1137
Query: 297 AMQGWEQAL-EHNYAHD--YCRENFXXXXXXXXXRDMKDQFSRTMHEMNFISSRT 348
A GW++A E Y + YCR NF D+K + + + F SS T
Sbjct: 1138 AYLGWKKARQEGGYRSEIAYCRRNFLNRTSLLTLEDVKQELMKLVKAAGFSSSTT 1192
>UNIPROTKB|J9P6V4 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 OMA:WLLYQEK
GeneTree:ENSGT00550000074257 EMBL:AAEX03001437
Ensembl:ENSCAFT00000043416 Uniprot:J9P6V4
Length = 1369
Score = 397 (144.8 bits), Expect = 1.6e-35, P = 1.6e-35
Identities = 94/212 (44%), Positives = 133/212 (62%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
GVRKIVLATNIAET ITI D+V+V+D G+TK + + +++L ++S A+A QR+GR
Sbjct: 922 GVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGR 981
Query: 89 AGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNTA 148
AGRV++G C+ +Y+R R + F DY +PEI R L+E+ L K + S
Sbjct: 982 AGRVRDGFCFRMYTRERFEGFMDYSVPEILRVPLEELC--LHIMKCNLGS---------- 1029
Query: 149 FTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEH-LTPLGYHLAKLPLDPQIGKML 207
P ++ K LDPP + ++ LLR I A + +E LTPLG HLA LP++ +IGKML
Sbjct: 1030 --PEDFLSK-ALDPPQLQVISNAMNLLRKIGACELNEPTLTPLGQHLAALPVNVKIGKML 1086
Query: 208 LMASIFSCVDPVFTVAASLGFKDAFYCPMIGK 239
+ +IF C+DPV T+AA + K F P IG+
Sbjct: 1087 IFGAIFGCLDPVATLAAVMTEKSPFTTP-IGR 1117
Score = 184 (69.8 bits), Expect = 7.2e-11, P = 7.2e-11
Identities = 42/115 (36%), Positives = 61/115 (53%)
Query: 237 IGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQGAKSDYVVLIN 296
IGKML+ +IF C+DPV T+AA + K F P+ + + D K+ LA A SD++ + N
Sbjct: 1082 IGKMLIFGAIFGCLDPVATLAAVMTEKSPFTTPIGRKDEADLAKSALAM-ADSDHLTIYN 1140
Query: 297 AMQGWEQAL-EHNYAHD--YCRENFXXXXXXXXXRDMKDQFSRTMHEMNFISSRT 348
A GW++A E Y + YCR NF D+K + + + F SS T
Sbjct: 1141 AYLGWKKARQEGGYRSEIAYCRRNFLNRTSLLTLEDVKQELMKLVKAAGFSSSTT 1195
>UNIPROTKB|I3LG95 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 EMBL:CU929534
Ensembl:ENSSSCT00000030291 Uniprot:I3LG95
Length = 1370
Score = 397 (144.8 bits), Expect = 1.6e-35, P = 1.6e-35
Identities = 94/212 (44%), Positives = 133/212 (62%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
GVRKIVLATNIAET ITI D+V+V+D G+TK + + +++L ++S A+A QR+GR
Sbjct: 922 GVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGR 981
Query: 89 AGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNTA 148
AGRV++G C+ +Y+R R + F DY +PEI R L+E+ L K + S
Sbjct: 982 AGRVRDGFCFRMYTRERFEGFMDYSVPEILRVPLEELC--LHIMKCNLGS---------- 1029
Query: 149 FTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDE-HLTPLGYHLAKLPLDPQIGKML 207
P ++ K LDPP + ++ LLR I A + +E LTPLG HLA LP++ +IGKML
Sbjct: 1030 --PEDFLSK-ALDPPQLQVISNAMHLLRKIGACELNEPKLTPLGQHLAALPVNVKIGKML 1086
Query: 208 LMASIFSCVDPVFTVAASLGFKDAFYCPMIGK 239
+ +IF C+DPV T+AA + K F P IG+
Sbjct: 1087 IFGAIFGCLDPVATLAAVMTEKSPFTTP-IGR 1117
Score = 173 (66.0 bits), Expect = 8.9e-10, Sum P(2) = 8.9e-10
Identities = 42/119 (35%), Positives = 63/119 (52%)
Query: 237 IGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQGAKSDYVVLIN 296
IGKML+ +IF C+DPV T+AA + K F P+ + + D K+ LA A SD++ + N
Sbjct: 1082 IGKMLIFGAIFGCLDPVATLAAVMTEKSPFTTPIGRKDEADLAKSALAM-ADSDHLTIYN 1140
Query: 297 AMQGWEQAL-EHNYAHD--YCRENFXXXXXXXXXRDMKDQFSRTM---HEMNFISSRTW 349
A GW++A E Y + YCR NF ++K F T+ + F S +T+
Sbjct: 1141 AYLGWKKAQQEGGYRSEIAYCRRNFLNRTSLLTLEEIKVSFPETIAIQYFYRFYSIKTY 1199
Score = 47 (21.6 bits), Expect = 8.9e-10, Sum P(2) = 8.9e-10
Identities = 15/51 (29%), Positives = 25/51 (49%)
Query: 64 DVKDNIATLKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYPL 114
D+K+ AT K E K R+G+ QE + + R +T +D+P+
Sbjct: 269 DIKEQAATFKLE-------KNRQGQK-EAQEKI--RKFQRVEMETLEDHPV 309
>UNIPROTKB|I3LQ47 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 OMA:WLLYQEK GeneTree:ENSGT00550000074257
EMBL:CU929534 Ensembl:ENSSSCT00000025611 Uniprot:I3LQ47
Length = 1370
Score = 397 (144.8 bits), Expect = 1.6e-35, P = 1.6e-35
Identities = 94/212 (44%), Positives = 133/212 (62%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
GVRKIVLATNIAET ITI D+V+V+D G+TK + + +++L ++S A+A QR+GR
Sbjct: 922 GVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGR 981
Query: 89 AGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNTA 148
AGRV++G C+ +Y+R R + F DY +PEI R L+E+ L K + S
Sbjct: 982 AGRVRDGFCFRMYTRERFEGFMDYSVPEILRVPLEELC--LHIMKCNLGS---------- 1029
Query: 149 FTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDE-HLTPLGYHLAKLPLDPQIGKML 207
P ++ K LDPP + ++ LLR I A + +E LTPLG HLA LP++ +IGKML
Sbjct: 1030 --PEDFLSK-ALDPPQLQVISNAMHLLRKIGACELNEPKLTPLGQHLAALPVNVKIGKML 1086
Query: 208 LMASIFSCVDPVFTVAASLGFKDAFYCPMIGK 239
+ +IF C+DPV T+AA + K F P IG+
Sbjct: 1087 IFGAIFGCLDPVATLAAVMTEKSPFTTP-IGR 1117
Score = 165 (63.1 bits), Expect = 7.3e-09, Sum P(2) = 7.3e-09
Identities = 39/110 (35%), Positives = 57/110 (51%)
Query: 237 IGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQGAKSDYVVLIN 296
IGKML+ +IF C+DPV T+AA + K F P+ + + D K+ LA A SD++ + N
Sbjct: 1082 IGKMLIFGAIFGCLDPVATLAAVMTEKSPFTTPIGRKDEADLAKSALAM-ADSDHLTIYN 1140
Query: 297 AMQGWEQAL-EHNYAHD--YCRENFXXXXXXXXXRDMKDQFSRTMHEMNF 343
A GW++A E Y + YCR NF + + M+E F
Sbjct: 1141 AYLGWKKAQQEGGYRSEIAYCRRNFLNRTSLLTLERRRTTLLKLMNENAF 1190
Score = 47 (21.6 bits), Expect = 7.3e-09, Sum P(2) = 7.3e-09
Identities = 15/51 (29%), Positives = 25/51 (49%)
Query: 64 DVKDNIATLKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYPL 114
D+K+ AT K E K R+G+ QE + + R +T +D+P+
Sbjct: 269 DIKEQAATFKLE-------KNRQGQK-EAQEKI--RKFQRVEMETLEDHPV 309
>UNIPROTKB|F1RLY9 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00355 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:9704 OMA:DSDQVFH GeneTree:ENSGT00700000104421
EMBL:FP102420 RefSeq:XP_003127294.1 Ensembl:ENSSSCT00000003454
GeneID:100515780 KEGG:ssc:100515780 Uniprot:F1RLY9
Length = 1146
Score = 268 (99.4 bits), Expect = 3.0e-35, Sum P(2) = 3.0e-35
Identities = 56/114 (49%), Positives = 79/114 (69%)
Query: 21 QNKSVFEL---GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWI 77
Q+K VF++ GVRK +L+TNIAETS+TID I +VVD GK K ++D + + L+ WI
Sbjct: 422 QDK-VFDVAPPGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWI 480
Query: 78 SLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDEVVRTLES 131
S A+A+QR+GRAGR GVC+ LY+ + F YP+PEI+R LD +V ++S
Sbjct: 481 SQASAEQRKGRAGRTGPGVCFRLYAESDYDAFAPYPVPEIRRVALDALVLQMKS 534
Score = 155 (59.6 bits), Expect = 3.0e-35, Sum P(2) = 3.0e-35
Identities = 32/73 (43%), Positives = 48/73 (65%)
Query: 160 LDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKMLLMASIFSCVDPV 219
++PP AS++ ++ LR ALD E LTP+G LA+LP+D IGKML++ S+ +PV
Sbjct: 546 IEPPPAASLETAILYLRDQGALDGSEALTPIGSLLAQLPVDIVIGKMLVLGSVLHLAEPV 605
Query: 220 FTVAASLGFKDAF 232
T+AA+L + F
Sbjct: 606 LTIAAALSVQSPF 618
Score = 75 (31.5 bits), Expect = 7.1e-27, Sum P(2) = 7.1e-27
Identities = 23/112 (20%), Positives = 41/112 (36%)
Query: 236 MIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQGAKSDYVVLI 295
+IGKML++ S+ +PV T+AA+L + F + K + D L
Sbjct: 588 VIGKMLVLGSVLHLAEPVLTIAAALSVQSPF---TRSTRSNPKCAWRALESDHGDPFTLF 644
Query: 296 NAMQGWEQALEHNYAHD--YCRENFXXXXXXXXXRDMKDQFSRTMHEMNFIS 345
N W Q +CR +++ QF + + ++
Sbjct: 645 NVFNNWVQVKSDRSTKSRRWCRREGIEEHRLYEMANLRRQFKELLEDHGLLA 696
>RGD|1308888 [details] [associations]
symbol:Dhx30 "DEAH (Asp-Glu-Ala-His) box polypeptide 30"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA;ISO;ISS] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0042645
"mitochondrial nucleoid" evidence=IEA;ISO;ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1308888 GO:GO:0005524 GO:GO:0003682 GO:GO:0003723 GO:GO:0042645
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:22907
HOGENOM:HOG000112212 HOVERGEN:HBG081437 KO:K13185 OrthoDB:EOG4VHK5M
EMBL:BC091359 IPI:IPI00949701 RefSeq:NP_001013267.1
UniGene:Rn.163034 ProteinModelPortal:Q5BJS0 SMR:Q5BJS0
PhosphoSite:Q5BJS0 PRIDE:Q5BJS0 Ensembl:ENSRNOT00000064600
GeneID:367172 KEGG:rno:367172 UCSC:RGD:1308888 NextBio:690809
ArrayExpress:Q5BJS0 Genevestigator:Q5BJS0
GermOnline:ENSRNOG00000029194 Uniprot:Q5BJS0
Length = 1194
Score = 379 (138.5 bits), Expect = 1.0e-33, P = 1.0e-33
Identities = 100/277 (36%), Positives = 156/277 (56%)
Query: 15 SGLKHLQNKSVFE---LGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIAT 71
S + + K++F+ LGVRKIVLATNIAETSIT++DIV+VVD G K +D+K ++
Sbjct: 706 SNIPMMDQKAIFQQPPLGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSC 765
Query: 72 LKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDEVVRTLES 131
L+ W+S AN QRRGRAGR Q G YHL+ R+R + + +PEI RT L+ +V L++
Sbjct: 766 LETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLV--LQA 823
Query: 132 KKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLG 191
K M + T ++ K V D P+ +V ++ LL+ I LD E+LT LG
Sbjct: 824 K-IHMPEK----------TAVEFLSKAV-DSPNIKAVDEAVILLQEIGVLDQREYLTTLG 871
Query: 192 YHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPM-----IGKMLLMASI 246
LA + DP++ K +++A+IF C+ P+ V + L +D F + + K+ + S
Sbjct: 872 QRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT-RDPFSSSLQNRAEVDKVKALLSH 930
Query: 247 FSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNIL 283
S D + V A G+++ ++ ++N+L
Sbjct: 931 DSGSDHLAFVRAVAGWEEVLRWQDRTSRENYLEENLL 967
Score = 140 (54.3 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 30/109 (27%), Positives = 54/109 (49%)
Query: 235 PMIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQGAKSDYVVL 294
P + K +++A+IF C+ P+ V + L +D F + +VDK K +L+ + SD++
Sbjct: 881 PRLAKAIVLAAIFRCLHPLLVVVSCLT-RDPFSSSLQNRAEVDKVKALLSHDSGSDHLAF 939
Query: 295 INAMQGWEQAL---EHNYAHDYCRENFXXXXXXXXXRDMKDQFSRTMHE 340
+ A+ GWE+ L + +Y EN + QFS ++E
Sbjct: 940 VRAVAGWEEVLRWQDRTSRENYLEENLLYAPSLRFIHGLIKQFSENIYE 988
>UNIPROTKB|Q5BJS0 [details] [associations]
symbol:Dhx30 "Putative ATP-dependent RNA helicase DHX30"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 RGD:1308888 GO:GO:0005524 GO:GO:0003682
GO:GO:0003723 GO:GO:0042645 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OrthoDB:EOG4VHK5M EMBL:BC091359 IPI:IPI00949701
RefSeq:NP_001013267.1 UniGene:Rn.163034 ProteinModelPortal:Q5BJS0
SMR:Q5BJS0 PhosphoSite:Q5BJS0 PRIDE:Q5BJS0
Ensembl:ENSRNOT00000064600 GeneID:367172 KEGG:rno:367172
UCSC:RGD:1308888 NextBio:690809 ArrayExpress:Q5BJS0
Genevestigator:Q5BJS0 GermOnline:ENSRNOG00000029194 Uniprot:Q5BJS0
Length = 1194
Score = 379 (138.5 bits), Expect = 1.0e-33, P = 1.0e-33
Identities = 100/277 (36%), Positives = 156/277 (56%)
Query: 15 SGLKHLQNKSVFE---LGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIAT 71
S + + K++F+ LGVRKIVLATNIAETSIT++DIV+VVD G K +D+K ++
Sbjct: 706 SNIPMMDQKAIFQQPPLGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSC 765
Query: 72 LKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDEVVRTLES 131
L+ W+S AN QRRGRAGR Q G YHL+ R+R + + +PEI RT L+ +V L++
Sbjct: 766 LETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLV--LQA 823
Query: 132 KKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLG 191
K M + T ++ K V D P+ +V ++ LL+ I LD E+LT LG
Sbjct: 824 K-IHMPEK----------TAVEFLSKAV-DSPNIKAVDEAVILLQEIGVLDQREYLTTLG 871
Query: 192 YHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPM-----IGKMLLMASI 246
LA + DP++ K +++A+IF C+ P+ V + L +D F + + K+ + S
Sbjct: 872 QRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT-RDPFSSSLQNRAEVDKVKALLSH 930
Query: 247 FSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNIL 283
S D + V A G+++ ++ ++N+L
Sbjct: 931 DSGSDHLAFVRAVAGWEEVLRWQDRTSRENYLEENLL 967
Score = 140 (54.3 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 30/109 (27%), Positives = 54/109 (49%)
Query: 235 PMIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQGAKSDYVVL 294
P + K +++A+IF C+ P+ V + L +D F + +VDK K +L+ + SD++
Sbjct: 881 PRLAKAIVLAAIFRCLHPLLVVVSCLT-RDPFSSSLQNRAEVDKVKALLSHDSGSDHLAF 939
Query: 295 INAMQGWEQAL---EHNYAHDYCRENFXXXXXXXXXRDMKDQFSRTMHE 340
+ A+ GWE+ L + +Y EN + QFS ++E
Sbjct: 940 VRAVAGWEEVLRWQDRTSRENYLEENLLYAPSLRFIHGLIKQFSENIYE 988
>MGI|MGI:1920081 [details] [associations]
symbol:Dhx30 "DEAH (Asp-Glu-Ala-His) box polypeptide 30"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=ISO] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0042645 "mitochondrial
nucleoid" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 MGI:MGI:1920081 GO:GO:0005524
GO:GO:0003682 GO:GO:0003723 GO:GO:0042645 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OMA:LHKEERY EMBL:AB047557 EMBL:AK146326 EMBL:AK148778
EMBL:AK153969 EMBL:BC004082 EMBL:BC016202 IPI:IPI00127902
IPI:IPI00270064 IPI:IPI00761204 RefSeq:NP_001239611.1
RefSeq:NP_001239612.1 RefSeq:NP_579925.1 UniGene:Mm.276305
ProteinModelPortal:Q99PU8 SMR:Q99PU8 PhosphoSite:Q99PU8
PaxDb:Q99PU8 PRIDE:Q99PU8 Ensembl:ENSMUST00000035056
Ensembl:ENSMUST00000062368 Ensembl:ENSMUST00000111991
Ensembl:ENSMUST00000136969 Ensembl:ENSMUST00000142911
Ensembl:ENSMUST00000148287 Ensembl:ENSMUST00000165596 GeneID:72831
KEGG:mmu:72831 UCSC:uc009rtg.1 UCSC:uc009rth.1 UCSC:uc009rti.1
ChiTaRS:DHX30 NextBio:337009 Bgee:Q99PU8 CleanEx:MM_DHX30
Genevestigator:Q99PU8 GermOnline:ENSMUSG00000032480 Uniprot:Q99PU8
Length = 1217
Score = 379 (138.5 bits), Expect = 1.1e-33, P = 1.1e-33
Identities = 100/277 (36%), Positives = 156/277 (56%)
Query: 15 SGLKHLQNKSVFE---LGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIAT 71
S + + K++F+ LGVRKIVLATNIAETSIT++DIV+VVD G K +D+K ++
Sbjct: 729 SNIPMMDQKAIFQQPPLGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSC 788
Query: 72 LKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDEVVRTLES 131
L+ W+S AN QRRGRAGR Q G YHL+ R+R + + +PEI RT L+ +V L++
Sbjct: 789 LETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLV--LQA 846
Query: 132 KKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLG 191
K M + T ++ K V D P+ +V ++ LL+ I LD E+LT LG
Sbjct: 847 K-IHMPEK----------TAVEFLSKAV-DSPNIKAVDEAVILLQEIGVLDQREYLTTLG 894
Query: 192 YHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPM-----IGKMLLMASI 246
LA + DP++ K +++A+IF C+ P+ V + L +D F + + K+ + S
Sbjct: 895 QRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT-RDPFSSSLQNRAEVDKVKALLSH 953
Query: 247 FSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNIL 283
S D + V A G+++ ++ ++N+L
Sbjct: 954 DSGSDHLAFVRAVAGWEEVLRWQDRTSRENYLEENLL 990
Score = 140 (54.3 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 30/109 (27%), Positives = 54/109 (49%)
Query: 235 PMIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQGAKSDYVVL 294
P + K +++A+IF C+ P+ V + L +D F + +VDK K +L+ + SD++
Sbjct: 904 PRLAKAIVLAAIFRCLHPLLVVVSCLT-RDPFSSSLQNRAEVDKVKALLSHDSGSDHLAF 962
Query: 295 INAMQGWEQAL---EHNYAHDYCRENFXXXXXXXXXRDMKDQFSRTMHE 340
+ A+ GWE+ L + +Y EN + QFS ++E
Sbjct: 963 VRAVAGWEEVLRWQDRTSRENYLEENLLYAPSLRFIHGLIKQFSENIYE 1011
>UNIPROTKB|D4A1V3 [details] [associations]
symbol:Dhx30 "Putative ATP-dependent RNA helicase DHX30"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1308888 GO:GO:0005524 GO:GO:0003682 GO:GO:0003676 GO:GO:0042645
EMBL:CH473954 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 OMA:LHKEERY
UniGene:Rn.163034 IPI:IPI00203041 Ensembl:ENSRNOT00000045878
Uniprot:D4A1V3
Length = 1222
Score = 379 (138.5 bits), Expect = 1.1e-33, P = 1.1e-33
Identities = 100/277 (36%), Positives = 156/277 (56%)
Query: 15 SGLKHLQNKSVFE---LGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIAT 71
S + + K++F+ LGVRKIVLATNIAETSIT++DIV+VVD G K +D+K ++
Sbjct: 734 SNIPMMDQKAIFQQPPLGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSC 793
Query: 72 LKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDEVVRTLES 131
L+ W+S AN QRRGRAGR Q G YHL+ R+R + + +PEI RT L+ +V L++
Sbjct: 794 LETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLV--LQA 851
Query: 132 KKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLG 191
K M + T ++ K V D P+ +V ++ LL+ I LD E+LT LG
Sbjct: 852 K-IHMPEK----------TAVEFLSKAV-DSPNIKAVDEAVILLQEIGVLDQREYLTTLG 899
Query: 192 YHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPM-----IGKMLLMASI 246
LA + DP++ K +++A+IF C+ P+ V + L +D F + + K+ + S
Sbjct: 900 QRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT-RDPFSSSLQNRAEVDKVKALLSH 958
Query: 247 FSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNIL 283
S D + V A G+++ ++ ++N+L
Sbjct: 959 DSGSDHLAFVRAVAGWEEVLRWQDRTSRENYLEENLL 995
Score = 140 (54.3 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 30/109 (27%), Positives = 54/109 (49%)
Query: 235 PMIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQGAKSDYVVL 294
P + K +++A+IF C+ P+ V + L +D F + +VDK K +L+ + SD++
Sbjct: 909 PRLAKAIVLAAIFRCLHPLLVVVSCLT-RDPFSSSLQNRAEVDKVKALLSHDSGSDHLAF 967
Query: 295 INAMQGWEQAL---EHNYAHDYCRENFXXXXXXXXXRDMKDQFSRTMHE 340
+ A+ GWE+ L + +Y EN + QFS ++E
Sbjct: 968 VRAVAGWEEVLRWQDRTSRENYLEENLLYAPSLRFIHGLIKQFSENIYE 1016
>UNIPROTKB|F1N0J0 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9913 "Bos taurus" [GO:0042645 "mitochondrial nucleoid"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0003676
GO:GO:0042645 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 IPI:IPI00717186 UniGene:Bt.24588 OMA:LHKEERY
EMBL:DAAA02054438 Ensembl:ENSBTAT00000030623 Uniprot:F1N0J0
Length = 1220
Score = 378 (138.1 bits), Expect = 1.4e-33, P = 1.4e-33
Identities = 91/221 (41%), Positives = 134/221 (60%)
Query: 15 SGLKHLQNKSVFE---LGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIAT 71
S + + K++F+ +GVRKIVLATNIAETSITI+DIV+VVD G K +D+K ++
Sbjct: 732 SNIPMMDQKAIFQQPPIGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSC 791
Query: 72 LKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDEVVRTLES 131
L+ W+S AN QRRGRAGR Q G YHL+ R+R + + +PEI RT L+ +V L++
Sbjct: 792 LETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMAPFQVPEILRTPLENLV--LQA 849
Query: 132 KKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLG 191
K M + T ++ K V D P+ +V ++ LL+ I LD E+LT LG
Sbjct: 850 K-IHMPEK----------TAVEFLSKAV-DSPNIKAVDEAVILLQEIGVLDQREYLTTLG 897
Query: 192 YHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAF 232
LA + DP++ K +++A+IF C+ P+ V + L +D F
Sbjct: 898 QRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT-RDPF 937
Score = 142 (55.0 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 30/109 (27%), Positives = 55/109 (50%)
Query: 235 PMIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQGAKSDYVVL 294
P + K +++A+IF C+ P+ V + L +D F + +VDK K +L+ + SD++
Sbjct: 907 PRLAKAIVLAAIFRCLHPLLVVVSCLT-RDPFSSSLQNRAEVDKVKALLSHDSGSDHLAF 965
Query: 295 INAMQGWEQAL---EHNYAHDYCRENFXXXXXXXXXRDMKDQFSRTMHE 340
+ A+ GWE+ L + + +Y EN + QFS ++E
Sbjct: 966 VRAVSGWEEVLRWQDRSSRENYLEENLLYAPSLRFIHGLIKQFSENIYE 1014
>UNIPROTKB|Q2NKY8 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9913 "Bos taurus" [GO:0042645 "mitochondrial nucleoid"
evidence=ISS] [GO:0003682 "chromatin binding" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003682 GO:GO:0003723 GO:GO:0042645
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:BC111349
IPI:IPI00717186 RefSeq:NP_001070003.1 UniGene:Bt.24588
ProteinModelPortal:Q2NKY8 SMR:Q2NKY8 PRIDE:Q2NKY8 GeneID:767607
KEGG:bta:767607 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
InParanoid:Q2NKY8 KO:K13185 OrthoDB:EOG4VHK5M NextBio:20918019
Uniprot:Q2NKY8
Length = 1220
Score = 378 (138.1 bits), Expect = 1.4e-33, P = 1.4e-33
Identities = 91/221 (41%), Positives = 134/221 (60%)
Query: 15 SGLKHLQNKSVFE---LGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIAT 71
S + + K++F+ +GVRKIVLATNIAETSITI+DIV+VVD G K +D+K ++
Sbjct: 732 SNIPMMDQKAIFQQPPIGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSC 791
Query: 72 LKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDEVVRTLES 131
L+ W+S AN QRRGRAGR Q G YHL+ R+R + + +PEI RT L+ +V L++
Sbjct: 792 LETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMAPFQVPEILRTPLENLV--LQA 849
Query: 132 KKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLG 191
K M + T ++ K V D P+ +V ++ LL+ I LD E+LT LG
Sbjct: 850 K-IHMPEK----------TAVEFLSKAV-DSPNIKAVDEAVILLQEIGVLDQREYLTTLG 897
Query: 192 YHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAF 232
LA + DP++ K +++A+IF C+ P+ V + L +D F
Sbjct: 898 QRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT-RDPF 937
Score = 142 (55.0 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 30/109 (27%), Positives = 55/109 (50%)
Query: 235 PMIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQGAKSDYVVL 294
P + K +++A+IF C+ P+ V + L +D F + +VDK K +L+ + SD++
Sbjct: 907 PRLAKAIVLAAIFRCLHPLLVVVSCLT-RDPFSSSLQNRAEVDKVKALLSHDSGSDHLAF 965
Query: 295 INAMQGWEQAL---EHNYAHDYCRENFXXXXXXXXXRDMKDQFSRTMHE 340
+ A+ GWE+ L + + +Y EN + QFS ++E
Sbjct: 966 VRAVSGWEEVLRWQDRSSRENYLEENLLYAPSLRFIHGLIKQFSENIYE 1014
>POMBASE|SPCC895.09c [details] [associations]
symbol:ucp12 "ATP-dependent RNA helicase Ucp12
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=ISS] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008150 "biological_process" evidence=ND] [GO:0043130
"ubiquitin binding" evidence=ISM] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR009060 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908
PROSITE:PS51194 SMART:SM00490 SMART:SM00591 SMART:SM00847
PomBase:SPCC895.09c GO:GO:0005829 GO:GO:0005524 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0003676 PROSITE:PS50030
InterPro:IPR016135 SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0043130 SUPFAM:SSF46934 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 PIR:T41647
RefSeq:NP_588050.1 ProteinModelPortal:O94536
EnsemblFungi:SPCC895.09c.1 GeneID:2539263 KEGG:spo:SPCC895.09c
HOGENOM:HOG000167651 OMA:GWARIGV OrthoDB:EOG4Z65WS NextBio:20800433
Uniprot:O94536
Length = 1327
Score = 378 (138.1 bits), Expect = 1.6e-33, P = 1.6e-33
Identities = 86/204 (42%), Positives = 123/204 (60%)
Query: 31 RKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAG 90
RKI+ ATNIAETSITIDD+V V+D G+ K ++DV+ ++ T K W S A +QRRGRAG
Sbjct: 865 RKIICATNIAETSITIDDVVAVIDSGRVKQIDYDVERDLVTFKETWASRAACQQRRGRAG 924
Query: 91 RVQEGVCYHLYSRA-REQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNTAF 149
RV++G+CY LY+R E+ PE+ RT L +V + +V +RF N+
Sbjct: 925 RVKKGICYKLYTRGFEEKGMLGQTPPEVLRTALSQVCLNV----VPLV-KRFSSAGNSVN 979
Query: 150 TPYVW-VPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKMLL 208
+ ++DPP+ A+V L+LK L + AL E LT LG +L LP+D ++GK+L+
Sbjct: 980 QGSIKKFMNSLIDPPNDATVDLALKKLIQVGALTVSEDLTGLGEYLVSLPIDLKLGKLLV 1039
Query: 209 MASIFSCVDPVFTVAASLGFKDAF 232
SIF ++P T+ A L K F
Sbjct: 1040 FGSIFGYLEPALTITAILSTKSPF 1063
>UNIPROTKB|H7BXY3 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HGNC:HGNC:16716 EMBL:AC139667 EMBL:AC026318
ProteinModelPortal:H7BXY3 SMR:H7BXY3 PRIDE:H7BXY3
Ensembl:ENST00000348968 Bgee:H7BXY3 Uniprot:H7BXY3
Length = 1166
Score = 377 (137.8 bits), Expect = 1.6e-33, P = 1.6e-33
Identities = 100/277 (36%), Positives = 156/277 (56%)
Query: 15 SGLKHLQNKSVFE---LGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIAT 71
S + + K++F+ +GVRKIVLATNIAETSITI+DIV+VVD G K +D+K ++
Sbjct: 678 SNIPMMDQKAIFQQPPVGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSC 737
Query: 72 LKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDEVVRTLES 131
L+ W+S AN QRRGRAGR Q G YHL+ R+R + + +PEI RT L+ +V L++
Sbjct: 738 LETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLV--LQA 795
Query: 132 KKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLG 191
K M + T ++ K V D P+ +V ++ LL+ I LD E+LT LG
Sbjct: 796 K-IHMPEK----------TAVEFLSKAV-DSPNIKAVDEAVILLQEIGVLDQREYLTTLG 843
Query: 192 YHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPM-----IGKMLLMASI 246
LA + DP++ K +++A+IF C+ P+ V + L +D F + + K+ + S
Sbjct: 844 QRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT-RDPFSSSLQNRAEVDKVKALLSH 902
Query: 247 FSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNIL 283
S D + V A G+++ ++ ++N+L
Sbjct: 903 DSGSDHLAFVRAVAGWEEVLRWQDRSSRENYLEENLL 939
Score = 141 (54.7 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 30/109 (27%), Positives = 55/109 (50%)
Query: 235 PMIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQGAKSDYVVL 294
P + K +++A+IF C+ P+ V + L +D F + +VDK K +L+ + SD++
Sbjct: 853 PRLAKAIVLAAIFRCLHPLLVVVSCLT-RDPFSSSLQNRAEVDKVKALLSHDSGSDHLAF 911
Query: 295 INAMQGWEQAL---EHNYAHDYCRENFXXXXXXXXXRDMKDQFSRTMHE 340
+ A+ GWE+ L + + +Y EN + QFS ++E
Sbjct: 912 VRAVAGWEEVLRWQDRSSRENYLEENLLYAPSLRFIHGLIKQFSENIYE 960
>UNIPROTKB|Q7L2E3 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0042645 "mitochondrial nucleoid" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003682
GO:GO:0003723 GO:GO:0042645 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OrthoDB:EOG4VHK5M EMBL:AB020697 EMBL:AK002076
EMBL:AK291266 EMBL:BC014237 EMBL:BC015029 EMBL:BC020126
EMBL:BC038417 IPI:IPI00411733 IPI:IPI00926109 IPI:IPI00927809
PIR:E56236 RefSeq:NP_055781.2 RefSeq:NP_619520.1 UniGene:Hs.517948
PDB:2DB2 PDBsum:2DB2 ProteinModelPortal:Q7L2E3 SMR:Q7L2E3
IntAct:Q7L2E3 MINT:MINT-1186537 STRING:Q7L2E3 PhosphoSite:Q7L2E3
DMDM:74758997 PaxDb:Q7L2E3 PRIDE:Q7L2E3 DNASU:22907
Ensembl:ENST00000445061 Ensembl:ENST00000446256
Ensembl:ENST00000457607 GeneID:22907 KEGG:hsa:22907 UCSC:uc003crt.3
UCSC:uc003cru.3 GeneCards:GC03P047844 HGNC:HGNC:16716 HPA:HPA034806
neXtProt:NX_Q7L2E3 PharmGKB:PA27217 InParanoid:Q7L2E3 OMA:LHKEERY
PhylomeDB:Q7L2E3 EvolutionaryTrace:Q7L2E3 GenomeRNAi:22907
NextBio:43571 ArrayExpress:Q7L2E3 Bgee:Q7L2E3 CleanEx:HS_DHX30
Genevestigator:Q7L2E3 Uniprot:Q7L2E3
Length = 1194
Score = 377 (137.8 bits), Expect = 1.7e-33, P = 1.7e-33
Identities = 100/277 (36%), Positives = 156/277 (56%)
Query: 15 SGLKHLQNKSVFE---LGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIAT 71
S + + K++F+ +GVRKIVLATNIAETSITI+DIV+VVD G K +D+K ++
Sbjct: 706 SNIPMMDQKAIFQQPPVGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSC 765
Query: 72 LKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDEVVRTLES 131
L+ W+S AN QRRGRAGR Q G YHL+ R+R + + +PEI RT L+ +V L++
Sbjct: 766 LETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLV--LQA 823
Query: 132 KKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLG 191
K M + T ++ K V D P+ +V ++ LL+ I LD E+LT LG
Sbjct: 824 K-IHMPEK----------TAVEFLSKAV-DSPNIKAVDEAVILLQEIGVLDQREYLTTLG 871
Query: 192 YHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPM-----IGKMLLMASI 246
LA + DP++ K +++A+IF C+ P+ V + L +D F + + K+ + S
Sbjct: 872 QRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT-RDPFSSSLQNRAEVDKVKALLSH 930
Query: 247 FSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNIL 283
S D + V A G+++ ++ ++N+L
Sbjct: 931 DSGSDHLAFVRAVAGWEEVLRWQDRSSRENYLEENLL 967
Score = 141 (54.7 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 30/109 (27%), Positives = 55/109 (50%)
Query: 235 PMIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQGAKSDYVVL 294
P + K +++A+IF C+ P+ V + L +D F + +VDK K +L+ + SD++
Sbjct: 881 PRLAKAIVLAAIFRCLHPLLVVVSCLT-RDPFSSSLQNRAEVDKVKALLSHDSGSDHLAF 939
Query: 295 INAMQGWEQAL---EHNYAHDYCRENFXXXXXXXXXRDMKDQFSRTMHE 340
+ A+ GWE+ L + + +Y EN + QFS ++E
Sbjct: 940 VRAVAGWEEVLRWQDRSSRENYLEENLLYAPSLRFIHGLIKQFSENIYE 988
>UNIPROTKB|J9P3P6 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AAEX03012236 Ensembl:ENSCAFT00000047198
Uniprot:J9P3P6
Length = 1135
Score = 376 (137.4 bits), Expect = 2.0e-33, P = 2.0e-33
Identities = 99/277 (35%), Positives = 156/277 (56%)
Query: 15 SGLKHLQNKSVFE---LGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIAT 71
S + + K++F+ +GVRKIVLATNIAETSIT++DIV+VVD G K +D+K ++
Sbjct: 706 SNIPMMDQKAIFQQPPVGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSC 765
Query: 72 LKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDEVVRTLES 131
L+ W+S AN QRRGRAGR Q G YHL+ R+R + + +PEI RT L+ +V L++
Sbjct: 766 LETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLV--LQA 823
Query: 132 KKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLG 191
K M + T ++ K V D P+ +V ++ LL+ I LD E+LT LG
Sbjct: 824 K-IHMPEK----------TAVEFLSKAV-DSPNIKAVDEAVILLQEIGVLDQREYLTTLG 871
Query: 192 YHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPM-----IGKMLLMASI 246
LA + DP++ K +++A+IF C+ P+ V + L +D F + + K+ + S
Sbjct: 872 QRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT-RDPFSSSLQNRAEVDKVKALLSH 930
Query: 247 FSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNIL 283
S D + V A G+++ ++ ++N+L
Sbjct: 931 DSGSDHLAFVRAVAGWEEVLRWQDRSSRENYLEENLL 967
Score = 141 (54.7 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 30/109 (27%), Positives = 55/109 (50%)
Query: 235 PMIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQGAKSDYVVL 294
P + K +++A+IF C+ P+ V + L +D F + +VDK K +L+ + SD++
Sbjct: 881 PRLAKAIVLAAIFRCLHPLLVVVSCLT-RDPFSSSLQNRAEVDKVKALLSHDSGSDHLAF 939
Query: 295 INAMQGWEQAL---EHNYAHDYCRENFXXXXXXXXXRDMKDQFSRTMHE 340
+ A+ GWE+ L + + +Y EN + QFS ++E
Sbjct: 940 VRAVAGWEEVLRWQDRSSRENYLEENLLYAPSLRFIHGLIKQFSENIYE 988
>UNIPROTKB|J9P264 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AAEX03012236 Ensembl:ENSCAFT00000047330
Uniprot:J9P264
Length = 1219
Score = 376 (137.4 bits), Expect = 2.2e-33, P = 2.2e-33
Identities = 99/277 (35%), Positives = 156/277 (56%)
Query: 15 SGLKHLQNKSVFE---LGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIAT 71
S + + K++F+ +GVRKIVLATNIAETSIT++DIV+VVD G K +D+K ++
Sbjct: 737 SNIPMMDQKAIFQQPPVGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSC 796
Query: 72 LKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDEVVRTLES 131
L+ W+S AN QRRGRAGR Q G YHL+ R+R + + +PEI RT L+ +V L++
Sbjct: 797 LETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLV--LQA 854
Query: 132 KKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLG 191
K M + T ++ K V D P+ +V ++ LL+ I LD E+LT LG
Sbjct: 855 K-IHMPEK----------TAVEFLSKAV-DSPNIKAVDEAVILLQEIGVLDQREYLTTLG 902
Query: 192 YHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPM-----IGKMLLMASI 246
LA + DP++ K +++A+IF C+ P+ V + L +D F + + K+ + S
Sbjct: 903 QRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT-RDPFSSSLQNRAEVDKVKALLSH 961
Query: 247 FSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNIL 283
S D + V A G+++ ++ ++N+L
Sbjct: 962 DSGSDHLAFVRAVAGWEEVLRWQDRSSRENYLEENLL 998
Score = 141 (54.7 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 30/109 (27%), Positives = 55/109 (50%)
Query: 235 PMIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQGAKSDYVVL 294
P + K +++A+IF C+ P+ V + L +D F + +VDK K +L+ + SD++
Sbjct: 912 PRLAKAIVLAAIFRCLHPLLVVVSCLT-RDPFSSSLQNRAEVDKVKALLSHDSGSDHLAF 970
Query: 295 INAMQGWEQAL---EHNYAHDYCRENFXXXXXXXXXRDMKDQFSRTMHE 340
+ A+ GWE+ L + + +Y EN + QFS ++E
Sbjct: 971 VRAVAGWEEVLRWQDRSSRENYLEENLLYAPSLRFIHGLIKQFSENIYE 1019
>UNIPROTKB|F1SLI4 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0042645 "mitochondrial nucleoid" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0003676
GO:GO:0042645 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:LHKEERY EMBL:CU633694 Ensembl:ENSSSCT00000012419
Uniprot:F1SLI4
Length = 1222
Score = 376 (137.4 bits), Expect = 2.3e-33, P = 2.3e-33
Identities = 91/221 (41%), Positives = 134/221 (60%)
Query: 15 SGLKHLQNKSVFE---LGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIAT 71
S + + K++F+ +GVRKIVLATNIAETSITI+DIV+VVD G K +D+K ++
Sbjct: 734 SNIPMMDQKAIFQQPPVGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSC 793
Query: 72 LKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDEVVRTLES 131
L+ W+S AN QRRGRAGR Q G YHL+ R+R + + +PEI RT L+ +V L++
Sbjct: 794 LETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLV--LQA 851
Query: 132 KKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLG 191
K M + T ++ K V D P+ +V ++ LL+ I LD E+LT LG
Sbjct: 852 K-IHMPEK----------TAVEFLSKAV-DSPNIKAVDEAVILLQEIGVLDQREYLTTLG 899
Query: 192 YHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAF 232
LA + DP++ K +++A+IF C+ P+ V + L +D F
Sbjct: 900 QRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT-RDPF 939
Score = 142 (55.0 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 30/109 (27%), Positives = 55/109 (50%)
Query: 235 PMIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQGAKSDYVVL 294
P + K +++A+IF C+ P+ V + L +D F + +VDK K +L+ + SD++
Sbjct: 909 PRLAKAIVLAAIFRCLHPLLVVVSCLT-RDPFSSSLQNRAEVDKVKALLSHDSGSDHLAF 967
Query: 295 INAMQGWEQAL---EHNYAHDYCRENFXXXXXXXXXRDMKDQFSRTMHE 340
+ A+ GWE+ L + + +Y EN + QFS ++E
Sbjct: 968 VRAVSGWEEVLRWQDRSSRENYLEENLLYAPSLRFIHGLIKQFSENIYE 1016
>UNIPROTKB|E2RL62 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:LHKEERY EMBL:AAEX03012236
Ensembl:ENSCAFT00000020710 NextBio:20852259 Uniprot:E2RL62
Length = 1222
Score = 376 (137.4 bits), Expect = 2.3e-33, P = 2.3e-33
Identities = 99/277 (35%), Positives = 156/277 (56%)
Query: 15 SGLKHLQNKSVFE---LGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIAT 71
S + + K++F+ +GVRKIVLATNIAETSIT++DIV+VVD G K +D+K ++
Sbjct: 734 SNIPMMDQKAIFQQPPVGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSC 793
Query: 72 LKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDEVVRTLES 131
L+ W+S AN QRRGRAGR Q G YHL+ R+R + + +PEI RT L+ +V L++
Sbjct: 794 LETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLV--LQA 851
Query: 132 KKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLG 191
K M + T ++ K V D P+ +V ++ LL+ I LD E+LT LG
Sbjct: 852 K-IHMPEK----------TAVEFLSKAV-DSPNIKAVDEAVILLQEIGVLDQREYLTTLG 899
Query: 192 YHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPM-----IGKMLLMASI 246
LA + DP++ K +++A+IF C+ P+ V + L +D F + + K+ + S
Sbjct: 900 QRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT-RDPFSSSLQNRAEVDKVKALLSH 958
Query: 247 FSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNIL 283
S D + V A G+++ ++ ++N+L
Sbjct: 959 DSGSDHLAFVRAVAGWEEVLRWQDRSSRENYLEENLL 995
Score = 141 (54.7 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 30/109 (27%), Positives = 55/109 (50%)
Query: 235 PMIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQGAKSDYVVL 294
P + K +++A+IF C+ P+ V + L +D F + +VDK K +L+ + SD++
Sbjct: 909 PRLAKAIVLAAIFRCLHPLLVVVSCLT-RDPFSSSLQNRAEVDKVKALLSHDSGSDHLAF 967
Query: 295 INAMQGWEQAL---EHNYAHDYCRENFXXXXXXXXXRDMKDQFSRTMHE 340
+ A+ GWE+ L + + +Y EN + QFS ++E
Sbjct: 968 VRAVAGWEEVLRWQDRSSRENYLEENLLYAPSLRFIHGLIKQFSENIYE 1016
>DICTYBASE|DDB_G0275313 [details] [associations]
symbol:dhx9 "ATP-dependent RNA helicase"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 dictyBase:DDB_G0275313 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GenomeReviews:CM000151_GR EMBL:AAFI02000013
GO:GO:0003725 GO:GO:0004003 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 RefSeq:XP_643861.1 ProteinModelPortal:Q869Z1
EnsemblProtists:DDB0233740 GeneID:8619912 KEGG:ddi:DDB_G0275313
InParanoid:Q869Z1 OMA:CEYLLEN Uniprot:Q869Z1
Length = 1472
Score = 372 (136.0 bits), Expect = 8.1e-33, P = 8.1e-33
Identities = 88/222 (39%), Positives = 136/222 (61%)
Query: 9 FLQCP--SSGLKHLQNKSVFELG---VRKIVLATNIAETSITIDDIVYVVDCGKTKMSNF 63
FL P SS LQ K VFE +RKIVL+TNIAETSITI+D+VYV+D K K+
Sbjct: 981 FLILPLHSSVSMQLQAK-VFEKPPPKIRKIVLSTNIAETSITINDVVYVIDSAKVKLKYH 1039
Query: 64 DVKDNIATLKPEWISLANAKQRRGRAGRVQ-EGVCYHLYSRAREQTFQDYPLPEIQRTRL 122
+ + ++ + W ++ KQRRGRAGRV+ +GVCYH+ SR R T +++ L E++R L
Sbjct: 1040 ETQRDLTLFQTVWACKSSLKQRRGRAGRVRKDGVCYHMVSRDRYNTLEEFQLSEMRRMPL 1099
Query: 123 DEVVRTLESKKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALD 182
E+ + KV++ ++ + L+PP+ S+ ++ LL + AL+
Sbjct: 1100 HELCLQV------------KVLVLGDVIGFL---SEALEPPETKSIDNAINLLIDLGALN 1144
Query: 183 DDEHLTPLGYHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAA 224
++ LTPLG L+ +P+DP+IGKM+++ S F C+DP+ T+A+
Sbjct: 1145 ANQELTPLGLQLSFIPVDPRIGKMIILGSYFRCLDPILTIAS 1186
Score = 172 (65.6 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 46/190 (24%), Positives = 98/190 (51%)
Query: 158 QVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKMLLMASIFSCVD 217
+ L+PP+ S+ ++ LL + AL+ ++ LTPLG L+ +P+DP+IGKM+++ S F C+D
Sbjct: 1120 EALEPPETKSIDNAINLLIDLGALNANQELTPLGLQLSFIPVDPRIGKMIILGSYFRCLD 1179
Query: 218 PVFTVAASLGFKDAFYCPMIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVD 277
P+ T+A+ K+ P+ ++++ + + +++Y ++
Sbjct: 1180 PILTIASFSNQKN----PI-------TTLYNQGNDNNNNNNNNN-NNSYYNNYYQQQP-Q 1226
Query: 278 KQKNILAQGAKSDYVVLINAMQGWEQALEHNYAHDYCRENFXXXXXXXXXRDMKDQFSRT 337
+ KN+ + +SD++ +N GW Q+ YC++ F +K Q T
Sbjct: 1227 QPKNLYPE-LQSDHLSFLNIFNGWLQSRMDGTEDQYCQD-FLSIPLLQQILKVKKQLLST 1284
Query: 338 MHEMNFISSR 347
++++ I+++
Sbjct: 1285 INDLGIINAQ 1294
>UNIPROTKB|G4MR96 [details] [associations]
symbol:MGG_04709 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
EMBL:CM001231 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 RefSeq:XP_003710833.1
EnsemblFungi:MGG_04709T0 GeneID:2677908 KEGG:mgr:MGG_04709
Uniprot:G4MR96
Length = 1504
Score = 371 (135.7 bits), Expect = 1.1e-32, P = 1.1e-32
Identities = 90/236 (38%), Positives = 130/236 (55%)
Query: 4 FFQIWFLQCPSSGLKHLQNKSVFEL---GVRKIVLATNIAETSITIDDIVYVVDCGKTKM 60
F Q W + S + + ++ F + G+RKIVLATNIAET ITI D+ V+D GK +
Sbjct: 993 FQQNWLVYPLHSTIATEEQEAAFLVPPHGMRKIVLATNIAETGITIPDVTCVIDTGKHRE 1052
Query: 61 SNFDVKDNIATLKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQ-DYPLPEIQR 119
FD + ++ L +IS ANAKQRRGRAGRVQ+G+C+H++++ R D PE+ R
Sbjct: 1053 MRFDERRQMSRLIDTFISRANAKQRRGRAGRVQQGLCFHMFTKYRHDAIMADQQTPEMLR 1112
Query: 120 TRLDEVVRTLESKKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLID 179
L ++ ++ K + + LDPP +++ ++ L +
Sbjct: 1113 LSLQDLAIRVKICKIGGIEETLS---------------KALDPPSAKNIRRAIDALIDVR 1157
Query: 180 ALDDDEHLTPLGYHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCP 235
AL E LTPLG LA+LPLD +GK++L+ SIF C+D TVAA L K F P
Sbjct: 1158 ALTQGEDLTPLGNQLARLPLDVFLGKLILLGSIFKCLDMAITVAAILSSKSPFVAP 1213
Score = 140 (54.3 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 34/114 (29%), Positives = 54/114 (47%)
Query: 237 IGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQGAKSDYVVLIN 296
+GK++L+ SIF C+D TVAA L K F P D + +G SD + + N
Sbjct: 1181 LGKLILLGSIFKCLDMAITVAAILSSKSPFVAPFGQRSQADTVRLGFRRG-DSDILTVYN 1239
Query: 297 AMQGWEQ---ALEHNYAHDY--CRENFXXXXXXXXXRDMKDQFSRTMHEMNFIS 345
A W++ A N + ++ CR+NF D+K Q ++ + F+S
Sbjct: 1240 AYLSWKRVCLAATGNSSQEFQFCRKNFLSQQTLANIEDLKGQLLVSLVDSKFLS 1293
Score = 38 (18.4 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 8/27 (29%), Positives = 13/27 (48%)
Query: 104 AREQTFQDYPLPEIQRTRLDEVVRTLE 130
A+ Q P P + ++ DE+ R E
Sbjct: 396 AKAQAASQEPEPAVAQSAEDEIAREAE 422
>ZFIN|ZDB-GENE-070912-171 [details] [associations]
symbol:dhx9 "DEAH (Asp-Glu-Ala-His) box polypeptide
9" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 ZFIN:ZDB-GENE-070912-171
GO:GO:0005524 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247063
GeneTree:ENSGT00550000074257 HOVERGEN:HBG039429 OrthoDB:EOG4HHP1J
OMA:DDWIRLQ EMBL:BX571812 IPI:IPI00491874 UniGene:Dr.79297
SMR:B0S6Z1 Ensembl:ENSDART00000111661 Ensembl:ENSDART00000134918
Uniprot:B0S6Z1
Length = 1271
Score = 369 (135.0 bits), Expect = 1.3e-32, P = 1.3e-32
Identities = 87/215 (40%), Positives = 128/215 (59%)
Query: 21 QNKSVFEL---GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWI 77
+ + VFE GV K++L+TNIAETSITI+D+V+V+D K K+ F +N+ W
Sbjct: 700 EQRRVFEPVPDGVTKVILSTNIAETSITINDVVFVLDSCKQKVKLFTSHNNMTNYATVWA 759
Query: 78 SLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMV 137
S N +QR+GRAGRV+ G C+HL SRAR + + + PEI RT L EV +++ + +
Sbjct: 760 SKTNLEQRKGRAGRVRPGFCFHLCSRARFEKLETHMTPEIFRTPLHEVALSIKLLRLGGI 819
Query: 138 SRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKL 197
L+ A P PP A ++ LR +DALD ++ LTPLG LAKL
Sbjct: 820 GN----FLSKAIEP----------PPLDAVIEAE-HTLRELDALDSNDELTPLGRILAKL 864
Query: 198 PLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAF 232
P++P++GKM++M IF+ D V T++A+ F + F
Sbjct: 865 PIEPRLGKMMIMGCIFNVGDAVCTISAATCFPEPF 899
>UNIPROTKB|Q5R607 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9601 "Pongo abelii" [GO:0003682 "chromatin binding"
evidence=ISS] [GO:0042645 "mitochondrial nucleoid" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0003723
GO:GO:0042645 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:22907
HOVERGEN:HBG081437 KO:K13185 EMBL:CR858337 EMBL:CR860693
RefSeq:NP_001125306.1 UniGene:Pab.19257 ProteinModelPortal:Q5R607
SMR:Q5R607 PRIDE:Q5R607 GeneID:100172205 KEGG:pon:100172205
InParanoid:Q5R607 Uniprot:Q5R607
Length = 1194
Score = 368 (134.6 bits), Expect = 1.6e-32, P = 1.6e-32
Identities = 98/277 (35%), Positives = 155/277 (55%)
Query: 15 SGLKHLQNKSVFE---LGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIAT 71
S + + K++F+ +GVRKIVLATNIAETS TI+DIV+VVD G K +D+K ++
Sbjct: 706 SNIPMMDQKAIFQQPPVGVRKIVLATNIAETSTTINDIVHVVDSGLHKEERYDLKTKVSC 765
Query: 72 LKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDEVVRTLES 131
L+ W+S AN QRRGRAGR Q G YHL+ R+R + + +PEI RT L+ +V L++
Sbjct: 766 LETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLV--LQA 823
Query: 132 KKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLG 191
K M + T ++ K V D P+ +V ++ LL+ I LD E+LT LG
Sbjct: 824 K-IHMPEK----------TAVEFLSKAV-DSPNIKAVDEAVILLQEIGVLDQREYLTTLG 871
Query: 192 YHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPM-----IGKMLLMASI 246
LA + +P++ K +++A+IF C+ P+ V + L +D F + + K+ + S
Sbjct: 872 QRLAHISTEPRLAKAIVLAAIFRCLHPLLVVVSCLT-RDPFSSSLQNRAEVDKVKALLSH 930
Query: 247 FSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNIL 283
S D + V A G+++ ++ ++N+L
Sbjct: 931 DSGSDHLAFVRAVAGWEEVLRWQDRSSRENYLEENLL 967
Score = 141 (54.7 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 30/109 (27%), Positives = 55/109 (50%)
Query: 235 PMIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQGAKSDYVVL 294
P + K +++A+IF C+ P+ V + L +D F + +VDK K +L+ + SD++
Sbjct: 881 PRLAKAIVLAAIFRCLHPLLVVVSCLT-RDPFSSSLQNRAEVDKVKALLSHDSGSDHLAF 939
Query: 295 INAMQGWEQAL---EHNYAHDYCRENFXXXXXXXXXRDMKDQFSRTMHE 340
+ A+ GWE+ L + + +Y EN + QFS ++E
Sbjct: 940 VRAVAGWEEVLRWQDRSSRENYLEENLLYAPSLRFIHGLIKQFSENIYE 988
>UNIPROTKB|Q5R874 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9601
"Pongo abelii" [GO:0030529 "ribonucleoprotein complex"
evidence=ISS] [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=ISS] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 GO:GO:0005524 GO:GO:0005813
GO:GO:0034605 GO:GO:0005730 GO:GO:0003677 Gene3D:3.30.160.20
GO:GO:0030529 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:1660 HOVERGEN:HBG039429 KO:K13184
OrthoDB:EOG4HHP1J GO:GO:0070937 OMA:DDWIRLQ GO:GO:0070934
EMBL:CR859880 RefSeq:XP_002809755.1 UniGene:Pab.8432
ProteinModelPortal:Q5R874 SMR:Q5R874 PRIDE:Q5R874
Ensembl:ENSPPYT00000000510 GeneID:100449914 KEGG:pon:100449914
InParanoid:Q5R874 Uniprot:Q5R874
Length = 1269
Score = 368 (134.6 bits), Expect = 1.7e-32, P = 1.7e-32
Identities = 83/215 (38%), Positives = 128/215 (59%)
Query: 21 QNKSVFE---LGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWI 77
+ + VF+ +GV K++L+TNIAETSITI+D+VYV+D K K+ F +N+ W
Sbjct: 694 EQRKVFDPVPVGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWA 753
Query: 78 SLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMV 137
S N +QR+GRAGRV+ G C+HL SRAR + + + PE+ RT L E+ +++ + +
Sbjct: 754 SKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMTPEMFRTPLHEIALSIKLLRLGGI 813
Query: 138 SRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKL 197
+ ++ K + PP A ++ LR +DALD ++ LTPLG LAKL
Sbjct: 814 GQ--------------FLAKAIEPPPLDAVIEAE-HTLRELDALDANDELTPLGRILAKL 858
Query: 198 PLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAF 232
P++P+ GKM++M IF D + T+AA+ F + F
Sbjct: 859 PIEPRFGKMMIMGCIFYVGDAICTIAAATCFPEPF 893
>UNIPROTKB|Q08211 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9606
"Homo sapiens" [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IEA] [GO:0034605 "cellular response to heat" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005813
"centrosome" evidence=IDA] [GO:0070937 "CRD-mediated mRNA stability
complex" evidence=IDA] [GO:0070934 "CRD-mediated mRNA
stabilization" evidence=IMP] [GO:0030529 "ribonucleoprotein
complex" evidence=IDA] [GO:0003724 "RNA helicase activity"
evidence=TAS] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=TAS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0001085 "RNA polymerase II transcription factor binding"
evidence=IPI] Reactome:REACT_71 InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 GO:GO:0005813 GO:GO:0005654 GO:GO:0034605
GO:GO:0005730 GO:GO:0003677 Reactome:REACT_1675 Gene3D:3.30.160.20
EMBL:CH471067 GO:GO:0030529 GO:GO:0003725 GO:GO:0004003
GO:GO:0000398 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000247063 CTD:1660 HOVERGEN:HBG039429 KO:K13184
OrthoDB:EOG4HHP1J GO:GO:0070937 OMA:DDWIRLQ EMBL:L13848 EMBL:U03643
EMBL:Y10658 EMBL:AB451248 EMBL:AB451372 EMBL:AL355999 EMBL:AL662837
EMBL:BC025245 EMBL:BC058896 EMBL:BC107881 EMBL:BC137136
IPI:IPI00844578 RefSeq:NP_001348.2 UniGene:Hs.191518 PDB:3LLM
PDBsum:3LLM ProteinModelPortal:Q08211 SMR:Q08211 DIP:DIP-31504N
IntAct:Q08211 MINT:MINT-5000572 STRING:Q08211 PhosphoSite:Q08211
DMDM:116241330 SWISS-2DPAGE:Q08211 PaxDb:Q08211 PRIDE:Q08211
Ensembl:ENST00000367549 GeneID:1660 KEGG:hsa:1660 UCSC:uc001gpr.3
GeneCards:GC01P182808 H-InvDB:HIX0001404 H-InvDB:HIX0149309
HGNC:HGNC:2750 HPA:CAB011819 HPA:HPA028050 MIM:603115
neXtProt:NX_Q08211 PharmGKB:PA27232 InParanoid:Q08211
GenomeRNAi:1660 NextBio:6832 PMAP-CutDB:Q08211 ArrayExpress:Q08211
Bgee:Q08211 CleanEx:HS_DHX9 Genevestigator:Q08211
GermOnline:ENSG00000135829 GO:GO:0070934 Uniprot:Q08211
Length = 1270
Score = 368 (134.6 bits), Expect = 1.7e-32, P = 1.7e-32
Identities = 83/215 (38%), Positives = 128/215 (59%)
Query: 21 QNKSVFE---LGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWI 77
+ + VF+ +GV K++L+TNIAETSITI+D+VYV+D K K+ F +N+ W
Sbjct: 694 EQRKVFDPVPVGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWA 753
Query: 78 SLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMV 137
S N +QR+GRAGRV+ G C+HL SRAR + + + PE+ RT L E+ +++ + +
Sbjct: 754 SKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMTPEMFRTPLHEIALSIKLLRLGGI 813
Query: 138 SRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKL 197
+ ++ K + PP A ++ LR +DALD ++ LTPLG LAKL
Sbjct: 814 GQ--------------FLAKAIEPPPLDAVIEAE-HTLRELDALDANDELTPLGRILAKL 858
Query: 198 PLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAF 232
P++P+ GKM++M IF D + T+AA+ F + F
Sbjct: 859 PIEPRFGKMMIMGCIFYVGDAICTIAAATCFPEPF 893
>FB|FBgn0002774 [details] [associations]
symbol:mle "maleless" species:7227 "Drosophila melanogaster"
[GO:0005700 "polytene chromosome" evidence=IDA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;TAS] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0000785 "chromatin"
evidence=IDA] [GO:0007549 "dosage compensation"
evidence=NAS;IMP;TAS] [GO:0009047 "dosage compensation by
hyperactivation of X chromosome" evidence=NAS] [GO:0045433 "male
courtship behavior, veined wing generated song production"
evidence=IGI] [GO:0016456 "X chromosome located dosage compensation
complex, transcription activating" evidence=NAS;TAS] [GO:0005694
"chromosome" evidence=NAS] [GO:0005634 "nucleus" evidence=IDA;NAS]
[GO:0003725 "double-stranded RNA binding" evidence=IEA;ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0016457 "dosage
compensation complex assembly involved in dosage compensation by
hyperactivation of X chromosome" evidence=TAS] [GO:0003724 "RNA
helicase activity" evidence=NAS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0048675 "axon extension" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0000805 "X chromosome" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0005665 "DNA-directed RNA polymerase II, core
complex" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001159 InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137
PROSITE:PS51194 SMART:SM00358 SMART:SM00490 SMART:SM00847
InterPro:IPR014720 EMBL:AE013599 GO:GO:0005524 GO:GO:0008340
Gene3D:3.30.160.20 GO:GO:0045944 GO:GO:0000785 GO:GO:0003682
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0045433 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0048675 GO:GO:0003724
GeneTree:ENSGT00550000074257 KO:K13184 OMA:DDWIRLQ GO:GO:0016456
EMBL:M74121 EMBL:BT003785 EMBL:BT010267 PIR:B40025
RefSeq:NP_476641.1 RefSeq:NP_724440.1 UniGene:Dm.2901
ProteinModelPortal:P24785 SMR:P24785 IntAct:P24785 MINT:MINT-768581
STRING:P24785 PaxDb:P24785 PRIDE:P24785 EnsemblMetazoa:FBtr0086031
GeneID:35523 KEGG:dme:Dmel_CG11680 CTD:35523 FlyBase:FBgn0002774
InParanoid:P24785 OrthoDB:EOG47H44V PhylomeDB:P24785
GenomeRNAi:35523 NextBio:793836 Bgee:P24785 GermOnline:CG11680
GO:GO:0016457 Uniprot:P24785
Length = 1293
Score = 365 (133.5 bits), Expect = 3.7e-32, P = 3.7e-32
Identities = 101/263 (38%), Positives = 144/263 (54%)
Query: 6 QIWFLQCPSSGLKHLQNKSVFEL---GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSN 62
Q L C S + Q K VFE GV KI+L+TNIAETSITIDDIV+V+D K +M
Sbjct: 684 QYQILPCHSQIPRDEQRK-VFEPVPEGVTKIILSTNIAETSITIDDIVFVIDICKARMKL 742
Query: 63 FDVKDNIATLKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRL 122
F +N+ + W S N +QR+GRAGRV+ G C+ L SRAR Q +D PE+ RT L
Sbjct: 743 FTSHNNLTSYATVWASKTNLEQRKGRAGRVRPGFCFTLCSRARFQALEDNLTPEMFRTPL 802
Query: 123 DEVVRTLESKKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALD 182
E+ T++ + + L+ A P PP A ++ + LLR + LD
Sbjct: 803 HEMALTIKLLRLGSIHH----FLSKALEP----------PPVDAVIEAEV-LLREMRCLD 847
Query: 183 DDEHLTPLGYHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAA-SLGFKDAFYCPMIGKML 241
++ LTPLG LA+LP++P++GKM+++ ++F C D + +A+ S F + F IG+
Sbjct: 848 ANDELTPLGRLLARLPIEPRLGKMMVLGAVFGCADLMAIMASYSSTFSEVFSLD-IGQRR 906
Query: 242 LM-----ASIFSCVDPVFTVAAS 259
L S C D V + AS
Sbjct: 907 LANHQKALSGTKCSDHVAMIVAS 929
>UNIPROTKB|E2RNT3 [details] [associations]
symbol:DHX9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=IEA] [GO:0070934 "CRD-mediated mRNA stabilization"
evidence=IEA] [GO:0034605 "cellular response to heat" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001085
"RNA polymerase II transcription factor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 GO:GO:0005524 GO:GO:0005813
GO:GO:0034605 GO:GO:0005730 Gene3D:3.30.160.20 GO:GO:0030529
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:1660 KO:K13184 GO:GO:0070937
OMA:DDWIRLQ GO:GO:0070934 EMBL:AAEX03005146 EMBL:AAEX03005147
RefSeq:XP_537154.2 Ensembl:ENSCAFT00000020976 GeneID:480032
KEGG:cfa:480032 NextBio:20855120 Uniprot:E2RNT3
Length = 1276
Score = 364 (133.2 bits), Expect = 4.6e-32, P = 4.6e-32
Identities = 83/215 (38%), Positives = 127/215 (59%)
Query: 21 QNKSVFE---LGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWI 77
+ + VF+ GV K++L+TNIAETSITI+D+VYV+D K K+ F +N+ W
Sbjct: 695 EQRKVFDPVPAGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWA 754
Query: 78 SLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMV 137
S N +QR+GRAGRV+ G C+HL SRAR + + + PE+ RT L E+ +++ + +
Sbjct: 755 SKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMTPEMFRTPLHEIALSIKLLRLGGI 814
Query: 138 SRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKL 197
+ ++ K + PP A ++ LR +DALD ++ LTPLG LAKL
Sbjct: 815 GQ--------------FLAKAIEPPPLDAVIEAE-HTLRELDALDANDELTPLGRILAKL 859
Query: 198 PLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAF 232
P++P+ GKM++M IF D V T++A+ F + F
Sbjct: 860 PIEPRFGKMMIMGCIFYVGDAVCTISAATCFPEPF 894
>UNIPROTKB|G5E5N3 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9913
"Bos taurus" [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=IEA] [GO:0070934 "CRD-mediated mRNA stabilization"
evidence=IEA] [GO:0034605 "cellular response to heat" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001085
"RNA polymerase II transcription factor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 GO:GO:0005524 GO:GO:0005813
GO:GO:0034605 GO:GO:0005730 Gene3D:3.30.160.20 GO:GO:0030529
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 UniGene:Bt.5544 GO:GO:0070937
OMA:DDWIRLQ GO:GO:0070934 EMBL:DAAA02043563 EMBL:DAAA02043564
Ensembl:ENSBTAT00000026409 Uniprot:G5E5N3
Length = 1287
Score = 363 (132.8 bits), Expect = 6.0e-32, P = 6.0e-32
Identities = 83/215 (38%), Positives = 127/215 (59%)
Query: 21 QNKSVFE---LGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWI 77
+ + VF+ GV KI+L+TNIAETSITI+D+VYV+D K K+ F +N+ W
Sbjct: 691 EQRKVFDPVPSGVTKIILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWA 750
Query: 78 SLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMV 137
S N +QR+GRAGRV+ G C+HL SRAR + + + PE+ RT L E+ +++ + +
Sbjct: 751 SKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMTPEMFRTPLHEIALSIKLLRLGGI 810
Query: 138 SRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKL 197
+ ++ K + PP A ++ LR +DALD ++ LTPLG LAKL
Sbjct: 811 GQ--------------FLAKAIEPPPLDAVIEAE-HTLRELDALDANDELTPLGRILAKL 855
Query: 198 PLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAF 232
P++P+ GKM++M IF D + T++A+ F + F
Sbjct: 856 PIEPRFGKMMIMGCIFYVGDAICTISAATCFPEPF 890
>UNIPROTKB|Q28141 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9913
"Bos taurus" [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=ISS] [GO:0030529 "ribonucleoprotein complex" evidence=ISS]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 GO:GO:0005730 GO:GO:0003677 Gene3D:3.30.160.20
GO:GO:0030529 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000247063 EMBL:X82829 IPI:IPI00714708
PIR:I46032 RefSeq:NP_776461.1 UniGene:Bt.5544
ProteinModelPortal:Q28141 SMR:Q28141 STRING:Q28141 PRIDE:Q28141
GeneID:281115 KEGG:bta:281115 CTD:1660 HOVERGEN:HBG039429
InParanoid:Q28141 KO:K13184 OrthoDB:EOG4HHP1J NextBio:20805185
GO:GO:0070937 Uniprot:Q28141
Length = 1287
Score = 363 (132.8 bits), Expect = 6.0e-32, P = 6.0e-32
Identities = 83/215 (38%), Positives = 127/215 (59%)
Query: 21 QNKSVFE---LGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWI 77
+ + VF+ GV KI+L+TNIAETSITI+D+VYV+D K K+ F +N+ W
Sbjct: 691 EQRKVFDPVPSGVTKIILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWA 750
Query: 78 SLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMV 137
S N +QR+GRAGRV+ G C+HL SRAR + + + PE+ RT L E+ +++ + +
Sbjct: 751 SKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMTPEMFRTPLHEIALSIKLLRLGGI 810
Query: 138 SRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKL 197
+ ++ K + PP A ++ LR +DALD ++ LTPLG LAKL
Sbjct: 811 GQ--------------FLAKAIEPPPLDAVIEAE-HTLRELDALDANDELTPLGRILAKL 855
Query: 198 PLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAF 232
P++P+ GKM++M IF D + T++A+ F + F
Sbjct: 856 PIEPRFGKMMIMGCIFYVGDAICTISAATCFPEPF 890
>UNIPROTKB|I3LHZ6 [details] [associations]
symbol:DHX9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00550000074257 OMA:DDWIRLQ
Ensembl:ENSSSCT00000025297 Uniprot:I3LHZ6
Length = 1274
Score = 361 (132.1 bits), Expect = 9.7e-32, P = 9.7e-32
Identities = 82/215 (38%), Positives = 126/215 (58%)
Query: 21 QNKSVFE---LGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWI 77
+ + VF+ GV K++L+TNIAETSITI+D+VYV+D K K+ F +N+ W
Sbjct: 686 EQRKVFDPVPAGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWA 745
Query: 78 SLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMV 137
S N +QR+GRAGRV+ G C+HL SRAR + + PE+ RT L E+ +++ + +
Sbjct: 746 SKTNLEQRKGRAGRVRPGFCFHLCSRARFDRLETHMTPEMFRTPLHEIALSIKLLRLGGI 805
Query: 138 SRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKL 197
+ ++ K + PP A ++ LR +DALD ++ LTPLG LAKL
Sbjct: 806 GQ--------------FLAKAIEPPPLDAVIEAE-HTLRELDALDANDELTPLGRILAKL 850
Query: 198 PLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAF 232
P++P+ GKM++M IF D + T++A+ F + F
Sbjct: 851 PIEPRFGKMMIMGCIFYVGDAICTISAATCFPEPF 885
>RGD|1308548 [details] [associations]
symbol:Dhx9 "DEAH (Asp-Glu-Ala-His) box polypeptide 9"
species:10116 "Rattus norvegicus" [GO:0001085 "RNA polymerase II
transcription factor binding" evidence=IEA;ISO] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0007623 "circadian rhythm" evidence=IEA;ISO]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA;ISO]
[GO:0034605 "cellular response to heat" evidence=IEA;ISO]
[GO:0070934 "CRD-mediated mRNA stabilization" evidence=IEA;ISO]
[GO:0070937 "CRD-mediated mRNA stability complex" evidence=IEA;ISO]
InterPro:IPR001159 InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137
PROSITE:PS51194 SMART:SM00358 SMART:SM00490 SMART:SM00847
InterPro:IPR014720 RGD:1308548 GO:GO:0005524 Gene3D:3.30.160.20
GO:GO:0005622 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:1660 KO:K13184 OrthoDB:EOG4HHP1J
EMBL:CH473958 IPI:IPI00947663 RefSeq:NP_001100654.1
UniGene:Rn.107359 Ensembl:ENSRNOT00000064860 GeneID:304859
KEGG:rno:304859 UCSC:RGD:1308548 NextBio:653729 Uniprot:D4A9D6
Length = 1174
Score = 360 (131.8 bits), Expect = 1.1e-31, P = 1.1e-31
Identities = 81/204 (39%), Positives = 121/204 (59%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
GV K++L+TNIAETSITI+D+VYV+D K K+ F +N+ W S N +QR+GR
Sbjct: 708 GVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGR 767
Query: 89 AGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNTA 148
AGRV+ G C+HL SRAR + + PE+ RT L E+ +++ + + +
Sbjct: 768 AGRVRPGFCFHLCSRARFDRLETHMTPEMFRTPLHEIALSIKLLRLGGIGQ--------- 818
Query: 149 FTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKMLL 208
++ K + PP A ++ LR +DALD ++ LTPLG LAKLP++P+ GKM++
Sbjct: 819 -----FLAKAIEPPPLDAVIEAE-HTLRELDALDANDELTPLGRILAKLPIEPRFGKMMI 872
Query: 209 MASIFSCVDPVFTVAASLGFKDAF 232
M IF D V T++A+ F + F
Sbjct: 873 MGCIFYVGDAVCTISAATCFPEPF 896
>MGI|MGI:108177 [details] [associations]
symbol:Dhx9 "DEAH (Asp-Glu-Ala-His) box polypeptide 9"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001085 "RNA polymerase II transcription factor
binding" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005813 "centrosome" evidence=ISO]
[GO:0007623 "circadian rhythm" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0030529 "ribonucleoprotein
complex" evidence=ISO] [GO:0034605 "cellular response to heat"
evidence=IDA] [GO:0070934 "CRD-mediated mRNA stabilization"
evidence=ISO] [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=ISO] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 MGI:MGI:108177 GO:GO:0005524
GO:GO:0034605 GO:GO:0005730 GO:GO:0003677 GO:GO:0007623
Gene3D:3.30.160.20 GO:GO:0030529 GO:GO:0003725 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247063 CTD:1660
HOVERGEN:HBG039429 KO:K13184 OrthoDB:EOG4HHP1J GO:GO:0070937
EMBL:U91922 EMBL:AF023530 EMBL:AY512925 EMBL:BC089159 EMBL:AK013423
EMBL:U92080 IPI:IPI00339468 IPI:IPI00607914 IPI:IPI00875791
RefSeq:NP_031868.2 UniGene:Mm.20000 PDB:1UIL PDB:1WHQ PDB:2RS6
PDB:2RS7 PDBsum:1UIL PDBsum:1WHQ PDBsum:2RS6 PDBsum:2RS7
ProteinModelPortal:O70133 SMR:O70133 IntAct:O70133 STRING:O70133
PhosphoSite:O70133 PaxDb:O70133 PRIDE:O70133 GeneID:13211
KEGG:mmu:13211 UCSC:uc007czy.1 InParanoid:O70133 ChiTaRS:DHX9
EvolutionaryTrace:O70133 NextBio:283382 CleanEx:MM_DHX9
Genevestigator:O70133 GermOnline:ENSMUSG00000042699 Uniprot:O70133
Length = 1380
Score = 360 (131.8 bits), Expect = 1.4e-31, P = 1.4e-31
Identities = 81/204 (39%), Positives = 121/204 (59%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
GV K++L+TNIAETSITI+D+VYV+D K K+ F +N+ W S N +QR+GR
Sbjct: 707 GVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGR 766
Query: 89 AGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNTA 148
AGRV+ G C+HL SRAR + + PE+ RT L E+ +++ + + +
Sbjct: 767 AGRVRPGFCFHLCSRARFDRLETHMTPEMFRTPLHEIALSIKLLRLGGIGQ--------- 817
Query: 149 FTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKMLL 208
++ K + PP A ++ LR +DALD ++ LTPLG LAKLP++P+ GKM++
Sbjct: 818 -----FLAKAIEPPPLDAIIEAE-HTLRELDALDANDELTPLGRILAKLPIEPRFGKMMI 871
Query: 209 MASIFSCVDPVFTVAASLGFKDAF 232
M IF D V T++A+ F + F
Sbjct: 872 MGCIFYVGDAVCTISAATCFPEPF 895
>UNIPROTKB|Q68FK8 [details] [associations]
symbol:dhx9 "ATP-dependent RNA helicase A-like protein"
species:8355 "Xenopus laevis" [GO:0070937 "CRD-mediated mRNA
stability complex" evidence=ISS] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 Gene3D:3.30.160.20
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:1660
HOVERGEN:HBG039429 KO:K13184 GO:GO:0070937 EMBL:BC079701
RefSeq:NP_001087383.1 UniGene:Xl.55621 ProteinModelPortal:Q68FK8
SMR:Q68FK8 PRIDE:Q68FK8 GeneID:447207 KEGG:xla:447207
Xenbase:XB-GENE-967780 Uniprot:Q68FK8
Length = 1262
Score = 354 (129.7 bits), Expect = 5.3e-31, P = 5.3e-31
Identities = 81/204 (39%), Positives = 121/204 (59%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
G+ K++L+TNIAETSITI+D+VYV+D K K+ F +N+ W S N +QR+GR
Sbjct: 707 GIIKVILSTNIAETSITINDVVYVIDSCKQKVKLFTSHNNMTNYATVWASKTNLEQRKGR 766
Query: 89 AGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNTA 148
AGRV+ G C+HL S+AR + + PEI RT L EV +++ + + L+ A
Sbjct: 767 AGRVRPGFCFHLCSKARFDKLETHLTPEIFRTPLHEVALSIKLLRLGGIGH----FLSKA 822
Query: 149 FTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKMLL 208
P PP A ++ LR +DALD ++ LTPLG LAKLP++P++GKM++
Sbjct: 823 IEP----------PPLDAVIEAE-HTLRELDALDSNDELTPLGRILAKLPIEPRLGKMMI 871
Query: 209 MASIFSCVDPVFTVAASLGFKDAF 232
+ IF D + T++A+ F + F
Sbjct: 872 IGCIFYVGDALCTISAATCFPEPF 895
>UNIPROTKB|G4MZR9 [details] [associations]
symbol:MGG_07059 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp22" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR009060 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00591 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR015940 SMART:SM00165 Gene3D:3.10.110.10
InterPro:IPR016135 SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:CM001232 SUPFAM:SSF46934 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 RefSeq:XP_003715240.1
ProteinModelPortal:G4MZR9 EnsemblFungi:MGG_07059T0 GeneID:2682944
KEGG:mgr:MGG_07059 Uniprot:G4MZR9
Length = 1404
Score = 350 (128.3 bits), Expect = 1.7e-30, P = 1.7e-30
Identities = 83/208 (39%), Positives = 123/208 (59%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
G RK+V+ATN+AETSITIDDI+ VVD GK K +++D +N+ L+ + SLA KQRRGR
Sbjct: 937 GKRKVVVATNVAETSITIDDIIVVVDTGKVKETSYDAANNMRRLEETFASLAACKQRRGR 996
Query: 89 AGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNTA 148
AGRVQ G CY LY+R E + P PE++R L+++ ++ + V R F T
Sbjct: 997 AGRVQAGECYKLYTRKLESQMAERPEPEMRRVPLEQLCLSVRAMGIADV-RGFLARAPT- 1054
Query: 149 FTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKMLL 208
PP+ A+V+ ++ +LR + LD +E LT LG LA +P D + GK+++
Sbjct: 1055 -------------PPEAAAVEGAITMLRRMGCLDGEE-LTALGRQLAAIPADLRCGKLMV 1100
Query: 209 MASIFSCVDPVFTVAASLGF-KDAFYCP 235
++F C++ +VAA L + F P
Sbjct: 1101 YGAVFGCLEDCVSVAALLSSGRGVFVSP 1128
>UNIPROTKB|G4NI12 [details] [associations]
symbol:MGG_17793 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0043581 "mycelium development"
evidence=IEP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 GO:GO:0043581
EMBL:CM001236 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 RefSeq:XP_003720239.1 EnsemblFungi:MGG_17793T0
GeneID:12987242 KEGG:mgr:MGG_17793 Uniprot:G4NI12
Length = 1430
Score = 349 (127.9 bits), Expect = 2.2e-30, P = 2.2e-30
Identities = 90/234 (38%), Positives = 131/234 (55%)
Query: 5 FQIWFLQCPSSGLKHLQNKSVFE---LGVRKIVLATNIAETSITIDDIVYVVDCGKTKMS 61
F+I FL S + QNK +F+ LG R+I+LA+NIAETS+TI D+V+VVD GKT+
Sbjct: 913 FRIHFLHSAVSAAE--QNK-IFQKVPLGCRRIILASNIAETSVTIPDVVHVVDVGKTRDR 969
Query: 62 NFDVKDNIATLKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTR 121
+D I + W + + A QR+GRAGR QEG Y LYS R Q+ +D LPE+ +
Sbjct: 970 KYDRSTRITGMYTGWQTKSKAMQRQGRAGRTQEGHYYGLYSEQRRQSMKDDALPEM--LK 1027
Query: 122 LDEVVRTLESKKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDAL 181
LD L K F F+ + ++ + PP P+ VQ ++ L+ +DAL
Sbjct: 1028 LDLTNTCLSVKGFG-----FR----DSVADFL---AAAISPPPPSVVQDAVNSLKAMDAL 1075
Query: 182 DDDEHLTPLGYHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCP 235
++E +T LG+ L ++PL P +GKM+L+ F CV P+ + A G F P
Sbjct: 1076 AENEGITSLGHLLLRIPLHPLLGKMILLGVFFRCVGPMIVLCALHGGGSLFEVP 1129
>FB|FBgn0030833 [details] [associations]
symbol:CG8915 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS51061 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:AE014298 GO:GO:0006200
GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00680000101018 FlyBase:FBgn0030833 EMBL:BT133099
RefSeq:NP_573208.1 SMR:Q9VX63 IntAct:Q9VX63 MINT:MINT-762262
EnsemblMetazoa:FBtr0074447 GeneID:32715 KEGG:dme:Dmel_CG8915
UCSC:CG8915-RA InParanoid:Q9VX63 OMA:WISQADA GenomeRNAi:32715
NextBio:779983 Uniprot:Q9VX63
Length = 976
Score = 338 (124.0 bits), Expect = 1.7e-29, P = 1.7e-29
Identities = 85/221 (38%), Positives = 119/221 (53%)
Query: 15 SGLKHLQNKSVFEL--GVR-KIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIAT 71
S + + + + VF GVR KI+L+TNI +TSITI D++YV+D G KM +D + +
Sbjct: 496 SQVDNSEQRKVFRTYPGVRLKIILSTNIGQTSITIPDLLYVIDTGLAKMKTYDSTIDASQ 555
Query: 72 LKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDEVVRTLES 131
L WIS A+AKQR GRAGRV G CY LY R Y +PEI R LDE+
Sbjct: 556 LTLTWISQADAKQRAGRAGRVCHGNCYRLYDNDRMARMNLYTIPEIMRRTLDEICLLT-- 613
Query: 132 KKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLG 191
K ++ + L A LD P +V S L+L+ LD+ + +TPLG
Sbjct: 614 -KLAAPDKKIENFLALA-----------LDTPPKDAVMQSCSRLKLLGVLDERDEVTPLG 661
Query: 192 YHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAF 232
+ +A+LPL QIGK L+ + C+D + +AA +D F
Sbjct: 662 HIVAELPLGVQIGKCLVYSIYLRCLDSMIIIAAYHSVRDPF 702
>TAIR|locus:2010549 [details] [associations]
symbol:AT1G27900 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007126 "meiosis" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0010332 "response to gamma
radiation" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0032204 "regulation of telomere
maintenance" evidence=RCA] [GO:0033044 "regulation of chromosome
organization" evidence=RCA] [GO:0042138 "meiotic DNA double-strand
break formation" evidence=RCA] [GO:0043247 "telomere maintenance in
response to DNA damage" evidence=RCA] [GO:0045132 "meiotic
chromosome segregation" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12818 EMBL:AY054692
EMBL:AY128718 IPI:IPI00545738 RefSeq:NP_564296.1 UniGene:At.25438
ProteinModelPortal:Q93Y16 SMR:Q93Y16 PaxDb:Q93Y16 PRIDE:Q93Y16
EnsemblPlants:AT1G27900.1 GeneID:839683 KEGG:ath:AT1G27900
TAIR:At1g27900 InParanoid:Q93Y16 OMA:NCRRFIV PhylomeDB:Q93Y16
ProtClustDB:CLSN2688039 ArrayExpress:Q93Y16 Genevestigator:Q93Y16
Uniprot:Q93Y16
Length = 700
Score = 277 (102.6 bits), Expect = 2.1e-29, Sum P(2) = 2.1e-29
Identities = 71/197 (36%), Positives = 104/197 (52%)
Query: 31 RKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAG 90
R+ +++TNIAETS+T+D +VYV+D G K ++ + +L IS A QR GRAG
Sbjct: 274 RRFIVSTNIAETSLTVDGVVYVIDSGYVKQRQYNPSSGMFSLDVIQISKVQANQRAGRAG 333
Query: 91 RVQEGVCYHLYSRA-REQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNTAF 149
R + G CY LY A F D +PEIQRT L V L+S + +L F
Sbjct: 334 RTRPGKCYRLYPLAVYRDDFLDATIPEIQRTSLAGSVLYLKSLDLPDID-----ILKFDF 388
Query: 150 TPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKMLLM 209
LD P S++ +LK L IDA+D++ +T +G ++ LPL+P + + L+
Sbjct: 389 ----------LDAPSSESLEDALKQLYFIDAIDENGAITRIGRTMSDLPLEPSLSRTLIE 438
Query: 210 ASIFSCVDPVFTVAASL 226
A+ C+ TV A L
Sbjct: 439 ANETGCLSQALTVVAML 455
Score = 83 (34.3 bits), Expect = 2.1e-29, Sum P(2) = 2.1e-29
Identities = 22/112 (19%), Positives = 47/112 (41%)
Query: 235 PMIGKMLLMASIFSCVDPVFTVAASLGFKDAFYC----PMNMEKDVDKQKNILAQGAKSD 290
P + + L+ A+ C+ TV A L + P ++ D+ N+ D
Sbjct: 430 PSLSRTLIEANETGCLSQALTVVAMLSAETTLLPARSKPSEKKRKHDEDSNLPNGSGYGD 489
Query: 291 YVVLINAMQGWEQALEHNYAHDYCRENFXXXXXXXXXRDMKDQFSRTMHEMN 342
++ L+ + W++ NY +C+EN +D++ Q + M +++
Sbjct: 490 HIQLLQIFESWDRT---NYDPVWCKENGMQVRGMVFVKDVRRQLCQIMQKIS 538
>SGD|S000004411 [details] [associations]
symbol:YLR419W "Putative helicase with limited sequence
similarity to human Rb protein" species:4932 "Saccharomyces
cerevisiae" [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50908 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00591 SMART:SM00847
SGD:S000004411 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
EMBL:BK006945 InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030
Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:U20162
RefSeq:NP_013525.3 GeneID:851140 KEGG:sce:YLR421C KO:K06691
HOGENOM:HOG000167651 OMA:GWARIGV OrthoDB:EOG4Z65WS
RefSeq:NP_013523.3 GeneID:851137 KEGG:sce:YLR419W PIR:S59384
ProteinModelPortal:Q06698 SMR:Q06698 IntAct:Q06698
MINT:MINT-2492948 STRING:Q06698 PaxDb:Q06698 PeptideAtlas:Q06698
PRIDE:Q06698 EnsemblFungi:YLR419W CYGD:YLR419w
GeneTree:ENSGT00680000101018 NextBio:967890 Genevestigator:Q06698
GermOnline:YLR419W Uniprot:Q06698
Length = 1435
Score = 308 (113.5 bits), Expect = 1.2e-28, Sum P(2) = 1.2e-28
Identities = 87/226 (38%), Positives = 127/226 (56%)
Query: 9 FLQCP-SSGLKHLQNKSVFEL--GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDV 65
F+ P S L K VF+ G RK+V++TNIAETSITIDD V +D G+ K ++
Sbjct: 892 FMVLPLHSALTPEDQKRVFKKYHGKRKVVVSTNIAETSITIDDCVATIDTGRAKSMFYNP 951
Query: 66 KDNIATLKPEWISLANAKQRRGRAGRVQEGVCYHLYSR-AREQTFQDYPLPEIQRTRLDE 124
KDN L +IS A KQRRGRAGRV+EG+ Y L+S+ E P+PEI+R L+
Sbjct: 952 KDNTTKLIESFISKAEVKQRRGRAGRVREGLSYKLFSKNLYENDMISMPIPEIKRIPLES 1011
Query: 125 VVRTLESKKFKMVSRRFKVMLNTAFTPYVWVPKQVLD-PPDPASVQLSLKLLRLIDALDD 183
+ ++++ K V K L+TA LD PP PA +Q + ++L I +D+
Sbjct: 1012 LYLSVKAMGIKDV----KAFLSTA-----------LDAPPLPA-LQKAERILTTIGLVDE 1055
Query: 184 -DEHLTPLGYHLAKLP-LDPQIGKMLLMASIFSCVDPVFTVAASLG 227
D+ LT LG ++ +P +D + GK+L+ +F C D + + LG
Sbjct: 1056 SDKSLTQLGQFISLMPVMDSKHGKLLIYGILFGCTDISVLLVSILG 1101
Score = 54 (24.1 bits), Expect = 1.2e-28, Sum P(2) = 1.2e-28
Identities = 17/108 (15%), Positives = 46/108 (42%)
Query: 238 GKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQ-GAKSDYVVLIN 296
GK+L+ +F C D + + LG + + ++ +K K +L + ++ D ++
Sbjct: 1078 GKLLIYGILFGCTDISVLLVSILGIGVLPF--IGGFENREKIKKLLCKYESRGDLFAVLE 1135
Query: 297 AMQGWEQALEHNYAHDYCRENFXXXXXXXXXRDMKDQFSRTMHEMNFI 344
++ + + + + Y R+N + Q+ + ++ F+
Sbjct: 1136 IVRDYFKIKDSSIKRKYLRDNLLSYNKINEIKSSTAQYYSILKDVGFL 1183
>CGD|CAL0004768 [details] [associations]
symbol:PRP22 species:5476 "Candida albicans" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IEA] [GO:0071021
"U2-type post-spliceosomal complex" evidence=IEA] [GO:0000350
"generation of catalytic spliceosome for second transesterification
step" evidence=IEA] [GO:0000390 "spliceosomal complex disassembly"
evidence=IEA] [GO:0000386 "second spliceosomal transesterification
activity" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0004768 GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AACQ01000012 InterPro:IPR022967 SMART:SM00316
KO:K12818 EMBL:AACQ01000011 RefSeq:XP_721941.1 RefSeq:XP_722102.1
ProteinModelPortal:Q5AJY8 STRING:Q5AJY8 GeneID:3636272
GeneID:3636404 KEGG:cal:CaO19.11516 KEGG:cal:CaO19.4033
Uniprot:Q5AJY8
Length = 996
Score = 329 (120.9 bits), Expect = 1.7e-28, P = 1.7e-28
Identities = 80/208 (38%), Positives = 117/208 (56%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
G RK++LATNIAETSITID I YVVD G K++ +D K + +L+ IS A A QR GR
Sbjct: 606 GSRKVILATNIAETSITIDGIYYVVDPGFVKINMYDSKLGMDSLRVTPISKAQANQRSGR 665
Query: 89 AGRVQEGVCYHLYS-RAREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNT 147
AGR G CY LY+ +A E+ +PEIQR L + L++ ++N
Sbjct: 666 AGRTGPGKCYRLYTEQAYEKEMIPNTIPEIQRQNLSHTILMLKAMGIHD-------LVNF 718
Query: 148 AFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKML 207
F +DPP ++ +L+ L ++DALDDD +LT LG +A LP++P + K L
Sbjct: 719 EF----------MDPPSTTTMLTALEDLYILDALDDDGNLTTLGRKMADLPMEPALAKTL 768
Query: 208 LMASIFSCVDPVFTVAASLGFKDAFYCP 235
+ + + C + + ++ A L + FY P
Sbjct: 769 IQSVEYECTEEILSIVAMLSVQTIFYRP 796
Score = 124 (48.7 bits), Expect = 0.00023, P = 0.00023
Identities = 24/109 (22%), Positives = 49/109 (44%)
Query: 235 PMIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQGAKSDYVVL 294
P + K L+ + + C + + ++ A L + FY P + + D++K+ D++ L
Sbjct: 762 PALAKTLIQSVEYECTEEILSIVAMLSVQTIFYRPKDKQALADQRKSRFHHSL-GDHLTL 820
Query: 295 INAMQGWEQALEHNYAHDYCRENFXXXXXXXXXRDMKDQFSRTMHEMNF 343
+N Q W +NY+ +CR+NF +++ Q M +
Sbjct: 821 LNVFQSW---CRNNYSKTWCRDNFIQERSMRRAMEVRKQLKSIMQRFGY 866
>DICTYBASE|DDB_G0285843 [details] [associations]
symbol:helD "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 dictyBase:DDB_G0285843 GO:GO:0005524
GenomeReviews:CM000153_GR GO:GO:0005681 GO:GO:0003676
EMBL:AAFI02000082 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
KO:K12815 RefSeq:XP_638016.1 EnsemblProtists:DDB0191460
GeneID:8625367 KEGG:ddi:DDB_G0285843 InParanoid:Q54MH4
ProtClustDB:CLSZ2846702 Uniprot:Q54MH4
Length = 1387
Score = 330 (121.2 bits), Expect = 2.2e-28, P = 2.2e-28
Identities = 83/228 (36%), Positives = 123/228 (53%)
Query: 9 FLQCPSSGLKHLQNKSVFELGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDN 68
+ Q PS + K+ + G RK ++ATNIAETS+T+D I+YV+D G K+ ++ +
Sbjct: 907 YSQLPSDMQAKIFEKA--DNGSRKCIIATNIAETSLTVDGILYVIDTGYCKLKVYNPRVG 964
Query: 69 IATLKPEWISLANAKQRRGRAGRVQEGVCYHLYSR-AREQTFQDYPLPEIQRTRLDEVVR 127
+ +L+ IS ANA QR GRAGR G CY LY+ A + D +PEIQRT L VV
Sbjct: 965 MDSLQVTPISKANANQRSGRAGRTGPGRCYRLYTESAFKYELMDNNIPEIQRTNLGNVVL 1024
Query: 128 TLESKKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHL 187
L+S K +L+ F +DPP ++ S+ L ++ ALDD +
Sbjct: 1025 NLKSMGVKN-------LLDFDF----------MDPPPQDNILNSMYQLWVLGALDDQGQI 1067
Query: 188 TPLGYHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCP 235
TPLG +++ PLDP + KM+++A C + T+ + L FY P
Sbjct: 1068 TPLGKRMSEFPLDPPLSKMVIVAEQLGCGQDIVTIVSMLSMPSVFYRP 1115
>TAIR|locus:2062492 [details] [associations]
symbol:MEE29 "maternal effect embryo arrest 29"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009793 "embryo development ending in
seed dormancy" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CP002685 GO:GO:0003676 GO:GO:0009793
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 OMA:RIDDHRD IPI:IPI00520097
RefSeq:NP_181077.3 UniGene:At.53041 ProteinModelPortal:F4IJV4
SMR:F4IJV4 PRIDE:F4IJV4 EnsemblPlants:AT2G35340.1 GeneID:818101
KEGG:ath:AT2G35340 Uniprot:F4IJV4
Length = 1044
Score = 323 (118.8 bits), Expect = 7.9e-28, P = 7.9e-28
Identities = 91/231 (39%), Positives = 127/231 (54%)
Query: 12 CPS-SGL-KHLQNKSVFEL---GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVK 66
CP + L LQ K +FE G RK+VLATNIAETS+TID I YVVD G +KM +++ +
Sbjct: 649 CPIYANLPSELQAK-IFEPTPEGARKVVLATNIAETSLTIDGIKYVVDPGFSKMKSYNPR 707
Query: 67 DNIATLKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQT-FQDYPLPEIQRTRLDEV 125
+ +L IS A+A QR GRAGR G CY LY+ +D +PEIQRT L V
Sbjct: 708 TGMESLLVTPISKASATQRTGRAGRTSPGKCYRLYTAFNYYNDLEDNTVPEIQRTNLASV 767
Query: 126 VRTLESKKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDE 185
V +L+S +LN F +DPP ++ SL+LL + AL+
Sbjct: 768 VLSLKSLGIHN-------LLNFDF----------MDPPPSEALIKSLELLFALGALNQLG 810
Query: 186 HLTPLGYHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDA-FYCP 235
LT G +A+ PLDP + KM++++ + C D + ++AA L + FY P
Sbjct: 811 ELTKAGRRMAEFPLDPMLSKMIVVSDKYKCSDEIISIAAMLSIGPSIFYRP 861
Score = 130 (50.8 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 28/114 (24%), Positives = 52/114 (45%)
Query: 235 PMIGKMLLMASIFSCVDPVFTVAASLGFKDA-FYCPMNMEKDVDKQKNILAQGAKSDYVV 293
PM+ KM++++ + C D + ++AA L + FY P + + D G D++
Sbjct: 826 PMLSKMIVVSDKYKCSDEIISIAAMLSIGPSIFYRPKDKQVHADNAMKNFHVGNVGDHIA 885
Query: 294 LINAMQGWEQALEHNYAHDYCRENFXXXXXXXXXRDMKDQFSRTMHEMNF-ISS 346
+ W+ E NY+ +C EN+ RD++DQ + + +SS
Sbjct: 886 FLKIYNSWK---ETNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIDVSS 936
>ZFIN|ZDB-GENE-030131-650 [details] [associations]
symbol:dhx15 "DEAH (Asp-Glu-Ala-His) box
polypeptide 15" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-030131-650 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA CTD:1665 EMBL:CU651678 IPI:IPI00481686
RefSeq:NP_001108613.1 UniGene:Dr.4024 Ensembl:ENSDART00000081245
GeneID:321931 KEGG:dre:321931 NextBio:20807587 Uniprot:E7F3I8
Length = 769
Score = 320 (117.7 bits), Expect = 9.1e-28, P = 9.1e-28
Identities = 79/210 (37%), Positives = 121/210 (57%)
Query: 31 RKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAG 90
RK+V++TNIAETS+TID +V+V+D G K ++ + + +L IS A+A+QR GRAG
Sbjct: 389 RKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAG 448
Query: 91 RVQEGVCYHLYS-RAREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNTAF 149
R + G C+ LY+ +A + QD PEI R+ L VV L+ KK + +++ F
Sbjct: 449 RTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVV--LQLKKLGIDD-----LVHFDF 501
Query: 150 TPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKMLLM 209
+DPP P ++ +L+LL + AL+DD LT LG +A+ PLDPQ+ KM++
Sbjct: 502 ----------MDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIA 551
Query: 210 ASIFSCVDPVFTVAASLGFKDAFYCPMIGK 239
+ F+C + V ++ A L F P K
Sbjct: 552 SCDFNCSNEVLSITAMLSVPQCFVRPTEAK 581
>DICTYBASE|DDB_G0291183 [details] [associations]
symbol:dhx8 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA;ISS]
[GO:0006396 "RNA processing" evidence=ISS] [GO:0005681
"spliceosomal complex" evidence=IEA;ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
dictyBase:DDB_G0291183 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0005681 GenomeReviews:CM000154_GR GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 EMBL:AAFI02000175
InterPro:IPR022967 SMART:SM00316 KO:K12818 OMA:NAWCYEN
RefSeq:XP_635385.1 HSSP:P05055 ProteinModelPortal:Q54F05
EnsemblProtists:DDB0233399 GeneID:8628033 KEGG:ddi:DDB_G0291183
ProtClustDB:CLSZ2846610 Uniprot:Q54F05
Length = 1160
Score = 323 (118.8 bits), Expect = 9.5e-28, P = 9.5e-28
Identities = 86/220 (39%), Positives = 122/220 (55%)
Query: 20 LQNKSVFEL---GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEW 76
+Q K +FE G RK+V+ATNIAETS+TID I YV+D G +K F+ K+ + +L
Sbjct: 763 MQTK-IFEPAPPGSRKVVIATNIAETSLTIDGIYYVIDPGFSKQKCFNPKNGMDSLVVAP 821
Query: 77 ISLANAKQRRGRAGRVQEGVCYHLYSR-AREQTFQDYPLPEIQRTRLDEVVRTLESKKFK 135
IS A A+QR GRAGR G CY LY+ A + +PEIQRT L V T+++
Sbjct: 822 ISQAAARQRSGRAGRTGPGKCYRLYTESAFKNEMLASSIPEIQRTNLGNTVLTMKAMGIN 881
Query: 136 MVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLA 195
+LN F +DPP ++ +++ L + ALD++ LT LG +A
Sbjct: 882 D-------LLNFDF----------MDPPPVQTLVSAMEQLYSLGALDEEGLLTRLGRKMA 924
Query: 196 KLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCP 235
+ PLDPQ+ KML+ + C D + TV A L ++ FY P
Sbjct: 925 EFPLDPQLSKMLIASVDLGCSDEILTVVAMLSVQNVFYRP 964
Score = 130 (50.8 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 29/114 (25%), Positives = 57/114 (50%)
Query: 235 PMIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQGAKSDYVVL 294
P + KML+ + C D + TV A L ++ FY P + D++K Q + D++ L
Sbjct: 930 PQLSKMLIASVDLGCSDEILTVVAMLSVQNVFYRPKEKQALADQKKAKFFQ-PEGDHLTL 988
Query: 295 INAMQGWEQALEHNYAHDYCRENFXXXXXXXXXRDMKDQFSRTM--HEMNFISS 346
+N + W+ + +++ +C ENF +D++ Q M ++++ IS+
Sbjct: 989 LNVYESWKNS---KFSNPWCFENFVQARSLRRAQDVRKQLITIMDRYKLDIISA 1039
>FB|FBgn0086444 [details] [associations]
symbol:l(2)37Cb "lethal (2) 37Cb" species:7227 "Drosophila
melanogaster" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;ISS] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014134 GO:GO:0022008 GO:GO:0003676 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 KO:K12813 GO:GO:0016779 GeneTree:ENSGT00700000104241
OMA:GTLHREF EMBL:AY061330 RefSeq:NP_609946.1 UniGene:Dm.468
SMR:Q9VIZ3 IntAct:Q9VIZ3 MINT:MINT-318410 STRING:Q9VIZ3
EnsemblMetazoa:FBtr0081163 GeneID:35192 KEGG:dme:Dmel_CG10689
UCSC:CG10689-RA FlyBase:FBgn0086444 InParanoid:Q9VIZ3
OrthoDB:EOG459ZWG GenomeRNAi:35192 NextBio:792305 Uniprot:Q9VIZ3
Length = 894
Score = 320 (117.7 bits), Expect = 1.3e-27, P = 1.3e-27
Identities = 80/207 (38%), Positives = 117/207 (56%)
Query: 31 RKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAG 90
RK++LATNIAETS+TID+I+YV+D G K +NF+ + + +L IS A+A QR GRAG
Sbjct: 521 RKVILATNIAETSLTIDNIIYVIDPGFAKQNNFNSRTGMESLMVVPISKASANQRAGRAG 580
Query: 91 RVQEGVCYHLYSR-AREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNTAF 149
R G C+ LY+ A + +D +PEIQR L V L++ + +N
Sbjct: 581 RTAPGKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKA-----------LGINDL- 628
Query: 150 TPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKMLLM 209
+ LDPP ++ L+L+ L + AL+ LT LG +A+ P+DP +GKMLL
Sbjct: 629 -----IHFDFLDPPPHETLVLALEQLYALGALNHHGELTKLGRRMAEFPVDPMMGKMLLA 683
Query: 210 ASIFSCVDPVFTVAASLGFKDA-FYCP 235
+ + C + + T+AA L A FY P
Sbjct: 684 SEKYKCSEEMVTIAAMLSVNSAIFYRP 710
>UNIPROTKB|E1C4U5 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0071013 "catalytic step
2 spliceosome" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:AADN02019394
IPI:IPI00591771 Ensembl:ENSGALT00000005796 Uniprot:E1C4U5
Length = 705
Score = 317 (116.6 bits), Expect = 1.6e-27, P = 1.6e-27
Identities = 87/228 (38%), Positives = 122/228 (53%)
Query: 15 SGLKHLQNKSVFEL---GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIAT 71
+GL VFE VRK+++ATN+AETSITI I YV+DCG K+ ++ K I
Sbjct: 317 AGLPSPDQMKVFERVSRSVRKVIVATNVAETSITIHGIAYVIDCGFVKLRAYNPKTAIEC 376
Query: 72 LKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYP---LPEIQRTRLDEVVRT 128
L +S A+A QR GRAGR + G CY LY+ A E+ F+ P +PE+QR+ L V+
Sbjct: 377 LVVVPVSKASANQRAGRAGRNRSGKCYRLYT-ATEEDFEKLPQSTVPEMQRSNLAPVILQ 435
Query: 129 LESKKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLT 188
L++ V R F P+ L PP S+ +L+LL + LD LT
Sbjct: 436 LKALGIDNVLR---------F-PF-------LSPPPAQSMVQALELLYALGGLDMHCRLT 478
Query: 189 -PLGYHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCP 235
PLG +A+ PL+P KMLL + F C + T+AA + ++ F P
Sbjct: 479 EPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILTIAAMMQIQNIFLIP 526
>UNIPROTKB|F1NHI3 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005689 "U12-type spliceosomal complex"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
GO:GO:0005689 EMBL:AADN02015408 EMBL:AADN02015409 EMBL:AADN02015410
IPI:IPI00577528 Ensembl:ENSGALT00000023259 Uniprot:F1NHI3
Length = 762
Score = 317 (116.6 bits), Expect = 1.9e-27, P = 1.9e-27
Identities = 78/210 (37%), Positives = 121/210 (57%)
Query: 31 RKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAG 90
RK+V++TNIAETS+TID +V+V+D G K ++ + + +L IS A+A+QR GRAG
Sbjct: 382 RKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAG 441
Query: 91 RVQEGVCYHLYS-RAREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNTAF 149
R + G C+ LY+ +A + QD PEI R+ L VV L+ KK + +++ F
Sbjct: 442 RTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVV--LQLKKLGIDD-----LVHFDF 494
Query: 150 TPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKMLLM 209
+DPP P ++ +L+LL + AL+DD LT LG +A+ PLDPQ+ KM++
Sbjct: 495 ----------MDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIA 544
Query: 210 ASIFSCVDPVFTVAASLGFKDAFYCPMIGK 239
+ ++C + V ++ A L F P K
Sbjct: 545 SCDYNCSNEVLSITAMLSVPQCFVRPTEAK 574
>UNIPROTKB|A5D7D9 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005689 "U12-type spliceosomal complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820
GeneTree:ENSGT00650000093246 OMA:TVLQIHA CTD:1665
HOVERGEN:HBG039428 OrthoDB:EOG4K6G3N GO:GO:0005689
EMBL:DAAA02017121 EMBL:BC140520 IPI:IPI00709068
RefSeq:NP_001091487.1 UniGene:Bt.58909 Ensembl:ENSBTAT00000011714
GeneID:512327 KEGG:bta:512327 InParanoid:A5D7D9 NextBio:20870343
Uniprot:A5D7D9
Length = 795
Score = 317 (116.6 bits), Expect = 2.1e-27, P = 2.1e-27
Identities = 78/210 (37%), Positives = 121/210 (57%)
Query: 31 RKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAG 90
RK+V++TNIAETS+TID +V+V+D G K ++ + + +L IS A+A+QR GRAG
Sbjct: 415 RKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAG 474
Query: 91 RVQEGVCYHLYS-RAREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNTAF 149
R + G C+ LY+ +A + QD PEI R+ L VV L+ KK + +++ F
Sbjct: 475 RTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVV--LQLKKLGIDD-----LVHFDF 527
Query: 150 TPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKMLLM 209
+DPP P ++ +L+LL + AL+DD LT LG +A+ PLDPQ+ KM++
Sbjct: 528 ----------MDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIA 577
Query: 210 ASIFSCVDPVFTVAASLGFKDAFYCPMIGK 239
+ ++C + V ++ A L F P K
Sbjct: 578 SCDYNCSNEVLSITAMLSVPQCFVRPTEAK 607
>UNIPROTKB|E2R2U3 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005689 "U12-type spliceosomal complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
CTD:1665 GO:GO:0005689 EMBL:AAEX03002593 EMBL:AAEX03002594
RefSeq:XP_851535.1 Ensembl:ENSCAFT00000026155 GeneID:488856
KEGG:cfa:488856 NextBio:20862139 Uniprot:E2R2U3
Length = 795
Score = 317 (116.6 bits), Expect = 2.1e-27, P = 2.1e-27
Identities = 78/210 (37%), Positives = 121/210 (57%)
Query: 31 RKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAG 90
RK+V++TNIAETS+TID +V+V+D G K ++ + + +L IS A+A+QR GRAG
Sbjct: 415 RKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAG 474
Query: 91 RVQEGVCYHLYS-RAREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNTAF 149
R + G C+ LY+ +A + QD PEI R+ L VV L+ KK + +++ F
Sbjct: 475 RTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVV--LQLKKLGIDD-----LVHFDF 527
Query: 150 TPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKMLLM 209
+DPP P ++ +L+LL + AL+DD LT LG +A+ PLDPQ+ KM++
Sbjct: 528 ----------MDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIA 577
Query: 210 ASIFSCVDPVFTVAASLGFKDAFYCPMIGK 239
+ ++C + V ++ A L F P K
Sbjct: 578 SCDYNCSNEVLSITAMLSVPQCFVRPTEAK 607
>UNIPROTKB|O43143 [details] [associations]
symbol:DHX15 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX15" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=TAS] [GO:0008380 "RNA splicing" evidence=IC]
[GO:0005689 "U12-type spliceosomal complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 EMBL:AB001636 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 GO:GO:0003724
KO:K12820 OMA:TVLQIHA EMBL:AF279891 EMBL:BC035974 IPI:IPI00396435
PIR:JC5785 RefSeq:NP_001349.2 UniGene:Hs.696074
ProteinModelPortal:O43143 SMR:O43143 DIP:DIP-38211N IntAct:O43143
MINT:MINT-5003827 STRING:O43143 PhosphoSite:O43143
SWISS-2DPAGE:O43143 PaxDb:O43143 PRIDE:O43143
Ensembl:ENST00000336812 GeneID:1665 KEGG:hsa:1665 UCSC:uc003gqx.3
CTD:1665 GeneCards:GC04M024519 HGNC:HGNC:2738 HPA:HPA047047
MIM:603403 neXtProt:NX_O43143 PharmGKB:PA27204 HOVERGEN:HBG039428
InParanoid:O43143 OrthoDB:EOG4K6G3N GenomeRNAi:1665 NextBio:6852
ArrayExpress:O43143 Bgee:O43143 CleanEx:HS_DHX15
Genevestigator:O43143 GermOnline:ENSG00000109606 GO:GO:0005689
Uniprot:O43143
Length = 795
Score = 317 (116.6 bits), Expect = 2.1e-27, P = 2.1e-27
Identities = 78/210 (37%), Positives = 121/210 (57%)
Query: 31 RKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAG 90
RK+V++TNIAETS+TID +V+V+D G K ++ + + +L IS A+A+QR GRAG
Sbjct: 415 RKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAG 474
Query: 91 RVQEGVCYHLYS-RAREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNTAF 149
R + G C+ LY+ +A + QD PEI R+ L VV L+ KK + +++ F
Sbjct: 475 RTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVV--LQLKKLGIDD-----LVHFDF 527
Query: 150 TPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKMLLM 209
+DPP P ++ +L+LL + AL+DD LT LG +A+ PLDPQ+ KM++
Sbjct: 528 ----------MDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIA 577
Query: 210 ASIFSCVDPVFTVAASLGFKDAFYCPMIGK 239
+ ++C + V ++ A L F P K
Sbjct: 578 SCDYNCSNEVLSITAMLSVPQCFVRPTEAK 607
>UNIPROTKB|F1S5A8 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005689 "U12-type spliceosomal complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00650000093246 OMA:TVLQIHA GO:GO:0005689
EMBL:CU633303 Ensembl:ENSSSCT00000009580 Uniprot:F1S5A8
Length = 795
Score = 317 (116.6 bits), Expect = 2.1e-27, P = 2.1e-27
Identities = 78/210 (37%), Positives = 121/210 (57%)
Query: 31 RKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAG 90
RK+V++TNIAETS+TID +V+V+D G K ++ + + +L IS A+A+QR GRAG
Sbjct: 415 RKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAG 474
Query: 91 RVQEGVCYHLYS-RAREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNTAF 149
R + G C+ LY+ +A + QD PEI R+ L VV L+ KK + +++ F
Sbjct: 475 RTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVV--LQLKKLGIDD-----LVHFDF 527
Query: 150 TPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKMLLM 209
+DPP P ++ +L+LL + AL+DD LT LG +A+ PLDPQ+ KM++
Sbjct: 528 ----------MDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIA 577
Query: 210 ASIFSCVDPVFTVAASLGFKDAFYCPMIGK 239
+ ++C + V ++ A L F P K
Sbjct: 578 SCDYNCSNEVLSITAMLSVPQCFVRPTEAK 607
>MGI|MGI:1099786 [details] [associations]
symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box polypeptide 15"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005689 "U12-type spliceosomal complex" evidence=ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
MGI:MGI:1099786 GO:GO:0005524 GO:GO:0005730 GO:GO:0008380
GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820 OMA:TVLQIHA CTD:1665
HOVERGEN:HBG039428 OrthoDB:EOG4K6G3N GO:GO:0005689 EMBL:AF017153
EMBL:BC003745 IPI:IPI00128818 RefSeq:NP_031865.2 UniGene:Mm.993
ProteinModelPortal:O35286 SMR:O35286 STRING:O35286
PhosphoSite:O35286 PaxDb:O35286 PRIDE:O35286
Ensembl:ENSMUST00000031061 GeneID:13204 KEGG:mmu:13204
InParanoid:O35286 NextBio:283358 Bgee:O35286 CleanEx:MM_DHX15
Genevestigator:O35286 GermOnline:ENSMUSG00000029169 Uniprot:O35286
Length = 795
Score = 317 (116.6 bits), Expect = 2.1e-27, P = 2.1e-27
Identities = 78/210 (37%), Positives = 121/210 (57%)
Query: 31 RKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAG 90
RK+V++TNIAETS+TID +V+V+D G K ++ + + +L IS A+A+QR GRAG
Sbjct: 415 RKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAG 474
Query: 91 RVQEGVCYHLYS-RAREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNTAF 149
R + G C+ LY+ +A + QD PEI R+ L VV L+ KK + +++ F
Sbjct: 475 RTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVV--LQLKKLGIDD-----LVHFDF 527
Query: 150 TPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKMLLM 209
+DPP P ++ +L+LL + AL+DD LT LG +A+ PLDPQ+ KM++
Sbjct: 528 ----------MDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIA 577
Query: 210 ASIFSCVDPVFTVAASLGFKDAFYCPMIGK 239
+ ++C + V ++ A L F P K
Sbjct: 578 SCDYNCSNEVLSITAMLSVPQCFVRPTEAK 607
>RGD|1308072 [details] [associations]
symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box polypeptide 15"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005689 "U12-type
spliceosomal complex" evidence=IEA;ISO] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 RGD:1308072 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA CTD:1665 OrthoDB:EOG4K6G3N GO:GO:0005689 EMBL:CH473963
IPI:IPI00361832 RefSeq:NP_001178526.1 UniGene:Rn.55597
Ensembl:ENSRNOT00000005126 GeneID:289693 KEGG:rno:289693
NextBio:630162 Uniprot:D3ZD97
Length = 795
Score = 317 (116.6 bits), Expect = 2.1e-27, P = 2.1e-27
Identities = 78/210 (37%), Positives = 121/210 (57%)
Query: 31 RKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAG 90
RK+V++TNIAETS+TID +V+V+D G K ++ + + +L IS A+A+QR GRAG
Sbjct: 415 RKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAG 474
Query: 91 RVQEGVCYHLYS-RAREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNTAF 149
R + G C+ LY+ +A + QD PEI R+ L VV L+ KK + +++ F
Sbjct: 475 RTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVV--LQLKKLGIDD-----LVHFDF 527
Query: 150 TPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKMLLM 209
+DPP P ++ +L+LL + AL+DD LT LG +A+ PLDPQ+ KM++
Sbjct: 528 ----------MDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIA 577
Query: 210 ASIFSCVDPVFTVAASLGFKDAFYCPMIGK 239
+ ++C + V ++ A L F P K
Sbjct: 578 SCDYNCSNEVLSITAMLSVPQCFVRPTEAK 607
>FB|FBgn0033160 [details] [associations]
symbol:CG11107 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC;ISS] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AE013599
GO:GO:0005524 GO:GO:0022008 GO:GO:0003676 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0016779 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA EMBL:AY058484 RefSeq:NP_610269.1 UniGene:Dm.4189
SMR:Q7K3M5 STRING:Q7K3M5 EnsemblMetazoa:FBtr0088966 GeneID:35654
KEGG:dme:Dmel_CG11107 UCSC:CG11107-RA FlyBase:FBgn0033160
InParanoid:Q7K3M5 OrthoDB:EOG4D254T GenomeRNAi:35654 NextBio:794560
Uniprot:Q7K3M5
Length = 729
Score = 316 (116.3 bits), Expect = 2.2e-27, P = 2.2e-27
Identities = 77/206 (37%), Positives = 120/206 (58%)
Query: 31 RKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAG 90
RK+V++TNIAETS+TID +V+V+D G K ++ + + +L IS A+A+QR GRAG
Sbjct: 348 RKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRSGRAG 407
Query: 91 RVQEGVCYHLYS-RAREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNTAF 149
R + G C+ LY+ +A + QD PEI R+ L VV L+ KK + +++ F
Sbjct: 408 RTRPGKCFRLYTEKAFKNEMQDNTYPEILRSNLGTVV--LQLKKLGIDD-----LVHFDF 460
Query: 150 TPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKMLLM 209
+DPP P ++ +L+LL + ALDDD +LT LG +++ PLDPQ+ KML+
Sbjct: 461 ----------MDPPAPETLMRALELLNYLAALDDDGNLTDLGAVMSEFPLDPQLAKMLIA 510
Query: 210 ASIFSCVDPVFTVAASLGFKDAFYCP 235
+ +C + + ++ A L F P
Sbjct: 511 SCQHNCSNEILSITAMLSVPQCFVRP 536
>ZFIN|ZDB-GENE-030131-8589 [details] [associations]
symbol:dhx16 "DEAH (Asp-Glu-Ala-His) box
polypeptide 16" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0035987
"endodermal cell differentiation" evidence=IMP] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-030131-8589 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 HOVERGEN:HBG039428 CTD:8449 OrthoDB:EOG4VHK5Q
GO:GO:0035987 EMBL:BC045393 IPI:IPI00495801 RefSeq:NP_956318.1
UniGene:Dr.76186 ProteinModelPortal:Q7ZVV8 STRING:Q7ZVV8
PRIDE:Q7ZVV8 GeneID:336645 KEGG:dre:336645 InParanoid:Q7ZVV8
NextBio:20811846 ArrayExpress:Q7ZVV8 Bgee:Q7ZVV8 Uniprot:Q7ZVV8
Length = 1054
Score = 317 (116.6 bits), Expect = 3.5e-27, P = 3.5e-27
Identities = 80/209 (38%), Positives = 119/209 (56%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
G RK+V+ATNIAETS+TID I+YV+D G K +++ K + +L S A+A QR GR
Sbjct: 679 GARKVVVATNIAETSLTIDGIIYVIDPGFCKQKSYNAKTGMESLIVTPCSRASANQRAGR 738
Query: 89 AGRVQEGVCYHLYSR-AREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNT 147
AGRV G C+ LY+ A + ++ +PEIQRT L VV L+S + +N
Sbjct: 739 AGRVAAGKCFRLYTAWAFKHEMEETTVPEIQRTNLGNVVLLLKS-----------LGIND 787
Query: 148 AFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKML 207
+ +DPP ++ L+L+ L + AL+ LT LG +A+LP+DP + KM+
Sbjct: 788 L------IHFDFMDPPPHETLVLALEQLYALGALNHLGELTKLGRRMAELPVDPMLSKMI 841
Query: 208 LMASIFSCVDPVFTVAASLGFKDA-FYCP 235
L + + C + V T+AA L ++ FY P
Sbjct: 842 LASEQYKCSEEVLTIAAMLSVNNSIFYRP 870
Score = 139 (54.0 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 36/116 (31%), Positives = 56/116 (48%)
Query: 235 PMIGKMLLMASIFSCVDPVFTVAASLGFKDA-FYCPMNMEKDVDKQK-NILAQGAKSDYV 292
PM+ KM+L + + C + V T+AA L ++ FY P + D + N + G D++
Sbjct: 835 PMLSKMILASEQYKCSEEVLTIAAMLSVNNSIFYRPKDKVVHADNARMNFVVPGG--DHL 892
Query: 293 VLINAMQGWEQALEHNYAHDYCRENFXXXXXXXXXRDMKDQFSRTMH--EMNFISS 346
VL+N W +E Y+ +C ENF RD++DQ M E+ SS
Sbjct: 893 VLLNVYTQW---VESGYSTQWCFENFIQFRSMKRARDVRDQLEGLMDRIEVELCSS 945
>CGD|CAL0005059 [details] [associations]
symbol:orf19.2818 species:5476 "Candida albicans" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IEA] [GO:0000386
"second spliceosomal transesterification activity" evidence=IEA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IEA]
[GO:0000350 "generation of catalytic spliceosome for second
transesterification step" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 CGD:CAL0005059
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACQ01000080 EMBL:AACQ01000079 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12815
RefSeq:XP_715749.1 RefSeq:XP_715799.1 STRING:Q5A227 GeneID:3642531
GeneID:3642595 KEGG:cal:CaO19.10336 KEGG:cal:CaO19.2818
Uniprot:Q5A227
Length = 1070
Score = 317 (116.6 bits), Expect = 3.6e-27, P = 3.6e-27
Identities = 85/227 (37%), Positives = 125/227 (55%)
Query: 13 PSSGLKHLQNKSVFELGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATL 72
P K + NK+ L RK+V+ATNIAETS+T+D I YV+DCG K+ ++ K + TL
Sbjct: 625 PQDLQKKIFNKT--NLQRRKVVVATNIAETSLTVDGIKYVIDCGLVKVKVYNPKLGMDTL 682
Query: 73 KPEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDY--PLPEIQRTRLDEVVRTLE 130
+ ISLANA QR GRAGR G+ Y LY+ + Y P+PEIQR+ L ++ L+
Sbjct: 683 QVVPISLANADQRSGRAGRTGAGIAYRLYTEKATEPDSMYVQPIPEIQRSNLSNIMLLLK 742
Query: 131 SKKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPL 190
S K ++ +F P+ LDPP + SL L I ALD+ LT L
Sbjct: 743 SLKVNDIN---------SF-PF-------LDPPPKDLLNCSLYDLWAIGALDNLGELTKL 785
Query: 191 GYHLAKLPLDPQIGKMLLMASI--FSCVDPVFTVAASLGFKDAFYCP 235
G+ + + P++P + K++L+++ F C + V T+ A L + F P
Sbjct: 786 GHSMTQFPIEPTLAKLILLSTQPEFHCSEEVVTIVAMLSVPNIFNRP 832
>TAIR|locus:2095989 [details] [associations]
symbol:AT3G62310 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009560 "embryo sac egg
cell differentiation" evidence=RCA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005829 GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0005730 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 EMBL:AL162507 KO:K12820
ProtClustDB:CLSN2683587 OMA:TVLQIHA EMBL:AY120782 EMBL:BT010331
IPI:IPI00540868 PIR:T48023 RefSeq:NP_191790.1 UniGene:At.34140
UniGene:At.4777 ProteinModelPortal:Q9LZQ9 SMR:Q9LZQ9 IntAct:Q9LZQ9
PaxDb:Q9LZQ9 PRIDE:Q9LZQ9 EnsemblPlants:AT3G62310.1 GeneID:825404
KEGG:ath:AT3G62310 TAIR:At3g62310 InParanoid:Q9LZQ9
PhylomeDB:Q9LZQ9 ArrayExpress:Q9LZQ9 Genevestigator:Q9LZQ9
Uniprot:Q9LZQ9
Length = 726
Score = 313 (115.2 bits), Expect = 4.5e-27, P = 4.5e-27
Identities = 78/206 (37%), Positives = 119/206 (57%)
Query: 31 RKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAG 90
RKIV++TNIAETS+TID IVYV+D G K ++ + + +L IS A+A QR GRAG
Sbjct: 342 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSGRAG 401
Query: 91 RVQEGVCYHLYS-RAREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNTAF 149
R + G C+ LY+ ++ Q PEI R+ L V TL KK + +++ F
Sbjct: 402 RTRPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTL--KKLGIDD-----LVHFDF 454
Query: 150 TPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKMLLM 209
+DPP P ++ +L++L + ALDDD +LT G +++ PLDPQ+ KML++
Sbjct: 455 ----------MDPPAPETLMRALEVLNYLGALDDDGNLTKTGEIMSEFPLDPQMAKMLIV 504
Query: 210 ASIFSCVDPVFTVAASLGFKDAFYCP 235
+ F+C + + +V+A L + F P
Sbjct: 505 SPEFNCSNEILSVSAMLSVPNCFIRP 530
>TAIR|locus:2033723 [details] [associations]
symbol:ESP3 "ENHANCED SILENCING PHENOTYPE 3" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=NAS] [GO:0008380 "RNA splicing" evidence=NAS]
[GO:0035194 "posttranscriptional gene silencing by RNA"
evidence=IMP] [GO:0016020 "membrane" evidence=IDA] [GO:0006306 "DNA
methylation" evidence=RCA] [GO:0006342 "chromatin silencing"
evidence=RCA] [GO:0007267 "cell-cell signaling" evidence=RCA]
[GO:0009616 "virus induced gene silencing" evidence=RCA]
[GO:0010267 "production of ta-siRNAs involved in RNA interference"
evidence=RCA] [GO:0035196 "production of miRNAs involved in gene
silencing by miRNA" evidence=RCA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0008380 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 GO:GO:0035194 OMA:GTLHREF EMBL:AY074318 EMBL:AY133872
IPI:IPI00543041 RefSeq:NP_174527.2 UniGene:At.40132
ProteinModelPortal:Q8VY00 IntAct:Q8VY00 PaxDb:Q8VY00 PRIDE:Q8VY00
EnsemblPlants:AT1G32490.1 GeneID:840143 KEGG:ath:AT1G32490
TAIR:At1g32490 InParanoid:Q8VY00 PhylomeDB:Q8VY00
ProtClustDB:CLSN2685836 ArrayExpress:Q8VY00 Genevestigator:Q8VY00
Uniprot:Q8VY00
Length = 1044
Score = 315 (115.9 bits), Expect = 5.7e-27, P = 5.7e-27
Identities = 88/231 (38%), Positives = 126/231 (54%)
Query: 12 CPS-SGL-KHLQNKSVFEL---GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVK 66
CP + L LQ K +FE G RK+VLATNIAETS+TID I YVVD G +KM +++ +
Sbjct: 649 CPIYANLPSELQAK-IFEPTPEGARKVVLATNIAETSLTIDGIKYVVDPGFSKMKSYNPR 707
Query: 67 DNIATLKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAR-EQTFQDYPLPEIQRTRLDEV 125
+ +L IS A+A QR GRAGR G CY LY+ ++ +PE+QRT L V
Sbjct: 708 TGMESLLITPISKASATQRAGRAGRTSPGKCYRLYTAFNYNNDLEENTVPEVQRTNLASV 767
Query: 126 VRTLESKKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDE 185
V L+S ++N F +DPP ++ SL+LL + AL+
Sbjct: 768 VLALKSLGIHD-------LINFDF----------MDPPPAEALVKSLELLFALGALNKLG 810
Query: 186 HLTPLGYHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDA-FYCP 235
LT G +A+ PLDP + KM++++ + C D + ++AA L + FY P
Sbjct: 811 ELTKAGRRMAEFPLDPMLSKMIVVSDKYKCSDEIISIAAMLSIGGSIFYRP 861
Score = 134 (52.2 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 29/114 (25%), Positives = 54/114 (47%)
Query: 235 PMIGKMLLMASIFSCVDPVFTVAASLGFKDA-FYCPMNMEKDVDKQKNILAQGAKSDYVV 293
PM+ KM++++ + C D + ++AA L + FY P + + D + G D++
Sbjct: 826 PMLSKMIVVSDKYKCSDEIISIAAMLSIGGSIFYRPKDKQVHADNARMNFHTGNVGDHIA 885
Query: 294 LINAMQGWEQALEHNYAHDYCRENFXXXXXXXXXRDMKDQFSRTMHEMNF-ISS 346
L+ W+ E N++ +C EN+ RD++DQ + + ISS
Sbjct: 886 LLKVYSSWK---ETNFSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIDISS 936
>FB|FBgn0086895 [details] [associations]
symbol:pea "peanuts" species:7227 "Drosophila melanogaster"
[GO:0007286 "spermatid development" evidence=IMP] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC;ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IC] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AE013599
GO:GO:0005524 GO:GO:0022008 GO:GO:0007286 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0000381 InterPro:IPR022967 SMART:SM00316
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN EMBL:BT044222
RefSeq:NP_610928.1 UniGene:Dm.12451 SMR:A1Z9L3 STRING:A1Z9L3
EnsemblMetazoa:FBtr0087518 GeneID:36561 KEGG:dme:Dmel_CG8241
UCSC:CG8241-RA CTD:36561 FlyBase:FBgn0086895 InParanoid:A1Z9L3
OrthoDB:EOG437PVS GenomeRNAi:36561 NextBio:799212 Uniprot:A1Z9L3
Length = 1242
Score = 316 (116.3 bits), Expect = 5.9e-27, P = 5.9e-27
Identities = 82/208 (39%), Positives = 113/208 (54%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
G RK+V+ATNIAETS+TID I YVVD G K ++ K + +L IS A AKQR GR
Sbjct: 852 GSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQAAAKQRAGR 911
Query: 89 AGRVQEGVCYHLYS-RAREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNT 147
AGR G Y LY+ RA P+PEIQRT L V L++ +L+
Sbjct: 912 AGRTGPGKTYRLYTERAYRDEMLPTPVPEIQRTNLATTVLQLKTMGIND-------LLHF 964
Query: 148 AFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKML 207
F +D P S+ ++L+ L + ALDD+ LT LG +A+ PL+P + KML
Sbjct: 965 DF----------MDAPPVESLVMALEQLHSLSALDDEGLLTRLGRRMAEFPLEPNLSKML 1014
Query: 208 LMASIFSCVDPVFTVAASLGFKDAFYCP 235
+M+ C D + T+ + L ++ FY P
Sbjct: 1015 IMSVALQCSDEILTIVSMLSVQNVFYRP 1042
Score = 130 (50.8 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 28/114 (24%), Positives = 58/114 (50%)
Query: 235 PMIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQGAKSDYVVL 294
P + KML+M+ C D + T+ + L ++ FY P + + D++K Q A+ D++ L
Sbjct: 1008 PNLSKMLIMSVALQCSDEILTIVSMLSVQNVFYRPKDKQALADQKKAKFNQ-AEGDHLTL 1066
Query: 295 INAMQGWEQALEHNYAHDYCRENFXXXXXXXXXRDMKDQFSRTM--HEMNFISS 346
+ W+ + +++ +C ENF +D++ Q M H+++ +S+
Sbjct: 1067 LAVYNSWKN---NKFSNAWCYENFVQIRTLKRSQDVRKQLLGIMDRHKLDVVSA 1117
>WB|WBGene00003392 [details] [associations]
symbol:mog-4 species:6239 "Caenorhabditis elegans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0018996
"molting cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0040020 "regulation of meiosis" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0007281 "germ cell development" evidence=IMP] [GO:0048589
"developmental growth" evidence=IMP] [GO:0010172 "embryonic body
morphogenesis" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001482 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF00437
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0002119 GO:GO:0008380 GO:GO:0006810 GO:GO:0018996
GO:GO:0006397 GO:GO:0003676 GO:GO:0042127 GO:GO:0040035
GO:GO:0007281 GO:GO:0048589 GO:GO:0010172 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0040022 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12813 EMBL:AF286900 EMBL:Z81462
EMBL:Z81457 PIR:T18832 RefSeq:NP_497027.1 UniGene:Cel.17139
ProteinModelPortal:O45244 SMR:O45244 DIP:DIP-24771N IntAct:O45244
MINT:MINT-1105817 STRING:O45244 PaxDb:O45244 EnsemblMetazoa:C04H5.6
GeneID:175117 KEGG:cel:CELE_C04H5.6 UCSC:C04H5.6 CTD:175117
WormBase:C04H5.6 GeneTree:ENSGT00700000104241 InParanoid:O45244
OMA:GTLHREF NextBio:886834 ArrayExpress:O45244 Uniprot:O45244
Length = 1008
Score = 314 (115.6 bits), Expect = 6.9e-27, P = 6.9e-27
Identities = 85/221 (38%), Positives = 119/221 (53%)
Query: 20 LQNKSVFE---LGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEW 76
LQ K +FE RK+VLATNIAETS+TID I YV+D G +K ++FD + + L
Sbjct: 621 LQAK-IFEPTPKDARKVVLATNIAETSVTIDGINYVIDPGFSKQNSFDARSGVEHLHVVT 679
Query: 77 ISLANAKQRRGRAGRVQEGVCYHLYSR-AREQTFQDYPLPEIQRTRLDEVVRTLESKKFK 135
IS A A QR GRAGR G C+ LY+ A + ++ P+PEIQRT L VV L+S
Sbjct: 680 ISKAAANQRAGRAGRTGPGKCFRLYTAWAYKHELEEQPIPEIQRTNLGNVVLMLKSLGIH 739
Query: 136 MVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLA 195
+ V LDPP ++ ++L+ L + AL+ LT LG +A
Sbjct: 740 DL-----------------VHFDFLDPPPQETLVIALEQLYALGALNHRGELTKLGRRMA 782
Query: 196 KLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDA-FYCP 235
+ P DP + KM++ + + C + + T+AA L A FY P
Sbjct: 783 EFPCDPCMSKMIIASEKYECSEEIVTIAAMLSCNAAVFYRP 823
>UNIPROTKB|O45244 [details] [associations]
symbol:mog-4 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-4" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001482 InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF00437 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0009792 GO:GO:0002119
GO:GO:0008380 GO:GO:0006810 GO:GO:0018996 GO:GO:0006397
GO:GO:0003676 GO:GO:0042127 GO:GO:0040035 GO:GO:0007281
GO:GO:0048589 GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0040022 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 EMBL:AF286900 EMBL:Z81462 EMBL:Z81457 PIR:T18832
RefSeq:NP_497027.1 UniGene:Cel.17139 ProteinModelPortal:O45244
SMR:O45244 DIP:DIP-24771N IntAct:O45244 MINT:MINT-1105817
STRING:O45244 PaxDb:O45244 EnsemblMetazoa:C04H5.6 GeneID:175117
KEGG:cel:CELE_C04H5.6 UCSC:C04H5.6 CTD:175117 WormBase:C04H5.6
GeneTree:ENSGT00700000104241 InParanoid:O45244 OMA:GTLHREF
NextBio:886834 ArrayExpress:O45244 Uniprot:O45244
Length = 1008
Score = 314 (115.6 bits), Expect = 6.9e-27, P = 6.9e-27
Identities = 85/221 (38%), Positives = 119/221 (53%)
Query: 20 LQNKSVFE---LGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEW 76
LQ K +FE RK+VLATNIAETS+TID I YV+D G +K ++FD + + L
Sbjct: 621 LQAK-IFEPTPKDARKVVLATNIAETSVTIDGINYVIDPGFSKQNSFDARSGVEHLHVVT 679
Query: 77 ISLANAKQRRGRAGRVQEGVCYHLYSR-AREQTFQDYPLPEIQRTRLDEVVRTLESKKFK 135
IS A A QR GRAGR G C+ LY+ A + ++ P+PEIQRT L VV L+S
Sbjct: 680 ISKAAANQRAGRAGRTGPGKCFRLYTAWAYKHELEEQPIPEIQRTNLGNVVLMLKSLGIH 739
Query: 136 MVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLA 195
+ V LDPP ++ ++L+ L + AL+ LT LG +A
Sbjct: 740 DL-----------------VHFDFLDPPPQETLVIALEQLYALGALNHRGELTKLGRRMA 782
Query: 196 KLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDA-FYCP 235
+ P DP + KM++ + + C + + T+AA L A FY P
Sbjct: 783 EFPCDPCMSKMIIASEKYECSEEIVTIAAMLSCNAAVFYRP 823
>DICTYBASE|DDB_G0285937 [details] [associations]
symbol:dhx16 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR002483 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01480
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0285937 GO:GO:0005524
GO:GO:0005634 GenomeReviews:CM000153_GR GO:GO:0008380 GO:GO:0006397
GO:GO:0003676 EMBL:AAFI02000082 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 Gene3D:1.20.1390.10 KO:K12813 GO:GO:0003724
RefSeq:XP_638017.1 EnsemblProtists:DDB0233398 GeneID:8625368
KEGG:ddi:DDB_G0285937 OMA:YLLEREV Uniprot:Q54MH3
Length = 1106
Score = 314 (115.6 bits), Expect = 8.0e-27, P = 8.0e-27
Identities = 82/221 (37%), Positives = 123/221 (55%)
Query: 20 LQNKSVFEL---GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEW 76
LQ K +FE RK+VLATNIAETS+TID I+YV+D G K F+ + + +L
Sbjct: 722 LQAK-IFEPTPPNARKVVLATNIAETSLTIDGIIYVIDPGFCKQKMFNPRTGMESLVITP 780
Query: 77 ISLANAKQRRGRAGRVQEGVCYHLYSR-AREQTFQDYPLPEIQRTRLDEVVRTLESKKFK 135
+S A+A QR+GRAGRV G C+ L++ A + ++ +PEIQRT L VV L+S
Sbjct: 781 VSRASANQRKGRAGRVAPGKCFRLFTAWAFDNELEENTIPEIQRTNLGNVVLLLKSMGIN 840
Query: 136 MVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLA 195
++N F +DPP ++ +L+ L + AL+D LT LG +A
Sbjct: 841 D-------LMNFDF----------MDPPPAQTLIAALEQLYALGALNDRGQLTKLGRKMA 883
Query: 196 KLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDA-FYCP 235
+ P+DPQ+ KM++ + + C + + T+ A L + FY P
Sbjct: 884 EFPVDPQLSKMIIASEKYKCSEEILTICAMLSVGNTIFYRP 924
>DICTYBASE|DDB_G0285213 [details] [associations]
symbol:dhx15 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA;ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0285213 GO:GO:0005524
GenomeReviews:CM000153_GR GO:GO:0008380 GO:GO:0006397 GO:GO:0005681
GO:GO:0003676 EMBL:AAFI02000076 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 KO:K12820 OMA:TVLQIHA RefSeq:XP_638323.1
ProteinModelPortal:Q54NJ4 EnsemblProtists:DDB0233403 GeneID:8624993
KEGG:ddi:DDB_G0285213 Uniprot:Q54NJ4
Length = 727
Score = 309 (113.8 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 80/223 (35%), Positives = 127/223 (56%)
Query: 15 SGLKHLQNKSVFEL-GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLK 73
S L Q +F+ RK +++TNIAETS+TID IV+VVD G +K ++ + + +L
Sbjct: 325 SSLPIYQQSKIFDTCKERKCIVSTNIAETSLTIDGIVFVVDPGFSKQKTYNPRSRVESLL 384
Query: 74 PEWISLANAKQRRGRAGRVQEGVCYHLYS-RAREQTFQDYPLPEIQRTRLDEVVRTLESK 132
IS A+A QR GRAGR + G C+ LY+ +A ++ PEI R+ L VV L+
Sbjct: 385 VAPISKASANQRAGRAGRTRPGKCFRLYTEKAFKELMIQQTHPEILRSNLASVV--LQLL 442
Query: 133 KFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGY 192
K +V +++ F +DPP P ++ +L++L + ALDD+ LT +G
Sbjct: 443 KLGVVD-----LVHFDF----------MDPPVPDTLIRALEVLHYLGALDDEGQLTEIGS 487
Query: 193 HLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCP 235
+++ PLDPQ+ KML++++ SC + + T+AA L + F P
Sbjct: 488 IMSEFPLDPQLSKMLIVSAERSCSNEILTIAAMLSAPNCFMRP 530
>TAIR|locus:2065210 [details] [associations]
symbol:AT2G47250 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020 GO:GO:0008380
GO:GO:0006397 GO:GO:0009941 GO:GO:0003676 EMBL:AC002337
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
EMBL:AY128301 EMBL:BT004534 IPI:IPI00540033 PIR:H84912
RefSeq:NP_182247.1 UniGene:At.36388 ProteinModelPortal:O22899
SMR:O22899 PaxDb:O22899 PRIDE:O22899 EnsemblPlants:AT2G47250.1
GeneID:819338 KEGG:ath:AT2G47250 GeneFarm:1798 TAIR:At2g47250
InParanoid:O22899 KO:K12820 OMA:XEIDEAC PhylomeDB:O22899
ProtClustDB:CLSN2683587 Genevestigator:O22899 GermOnline:AT2G47250
Uniprot:O22899
Length = 729
Score = 309 (113.8 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 77/206 (37%), Positives = 119/206 (57%)
Query: 31 RKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAG 90
RKIV++TNIAETS+TID IVYV+D G K ++ + + +L IS A+A QR GRAG
Sbjct: 346 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSGRAG 405
Query: 91 RVQEGVCYHLYS-RAREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNTAF 149
R + G C+ LY+ ++ Q PEI R+ L V TL KK + +++ F
Sbjct: 406 RTRPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTL--KKLGIDD-----LVHFDF 458
Query: 150 TPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKMLLM 209
+DPP P ++ +L++L + ALDD+ +LT G +++ PLDPQ+ KML++
Sbjct: 459 ----------MDPPAPETLMRALEVLNYLGALDDEGNLTKTGEIMSEFPLDPQMSKMLIV 508
Query: 210 ASIFSCVDPVFTVAASLGFKDAFYCP 235
+ F+C + + +V+A L + F P
Sbjct: 509 SPEFNCSNEILSVSAMLSVPNCFVRP 534
>GENEDB_PFALCIPARUM|PF10_0294 [details] [associations]
symbol:PF10_0294 "RNA helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0008380 "RNA splicing"
evidence=ISS] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008380 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:AE014185 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
HSSP:P05055 RefSeq:XP_001347578.1 ProteinModelPortal:Q8IJA4
IntAct:Q8IJA4 MINT:MINT-1724156 EnsemblProtists:PF10_0294:mRNA
GeneID:810451 KEGG:pfa:PF10_0294 EuPathDB:PlasmoDB:PF3D7_1030100
OMA:HRHSKEH ProtClustDB:CLSZ2433181 Uniprot:Q8IJA4
Length = 1290
Score = 313 (115.2 bits), Expect = 1.3e-26, P = 1.3e-26
Identities = 79/208 (37%), Positives = 116/208 (55%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
G RK +LATNIAE S+TID I +V+D G K+ +D K ++ +L IS ANAKQR GR
Sbjct: 898 GCRKCILATNIAEASLTIDGIFFVIDPGFCKIKKYDSKRDMDSLIVAPISKANAKQRAGR 957
Query: 89 AGRVQEGVCYHLYSR-AREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNT 147
AGR G CY LY+ A + + +PEIQR L +V L++ + +N
Sbjct: 958 AGRTGPGKCYRLYTEEAYKNEMSEMSVPEIQRINLGSIVLLLKA-----------LGIND 1006
Query: 148 AFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKML 207
F + +D P ++ SL+ L + ALDD+ +LT LG +A P++P + K+L
Sbjct: 1007 -FLHF-----DFMDSPSVETLIHSLENLYYLGALDDNGYLTKLGKKMANFPMEPNLSKIL 1060
Query: 208 LMASIFSCVDPVFTVAASLGFKDAFYCP 235
L + F+C D V T+ + L ++ FY P
Sbjct: 1061 LTSLNFNCTDDVVTIVSMLSVQNIFYRP 1088
Score = 142 (55.0 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 32/111 (28%), Positives = 56/111 (50%)
Query: 235 PMIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKN--ILAQGAKSDYV 292
P + K+LL + F+C D V T+ + L ++ FY P N DK+KN I+ QG D +
Sbjct: 1054 PNLSKILLTSLNFNCTDDVVTIVSMLSVQNIFYRPQNKALLADKKKNKFIMPQG---DLI 1110
Query: 293 VLINAMQGWEQALEHNYAHDYCRENFXXXXXXXXXRDMKDQFSRTMHEMNF 343
+N W+ E+++++ +C ENF +D++ Q + N+
Sbjct: 1111 TYLNIYNKWK---ENSFSNYWCHENFIQSRALKRAQDVRKQMLSIFEKYNY 1158
>UNIPROTKB|Q8IJA4 [details] [associations]
symbol:PF10_0294 "RNA helicase, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008380 "RNA splicing" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008380 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:AE014185 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
HSSP:P05055 RefSeq:XP_001347578.1 ProteinModelPortal:Q8IJA4
IntAct:Q8IJA4 MINT:MINT-1724156 EnsemblProtists:PF10_0294:mRNA
GeneID:810451 KEGG:pfa:PF10_0294 EuPathDB:PlasmoDB:PF3D7_1030100
OMA:HRHSKEH ProtClustDB:CLSZ2433181 Uniprot:Q8IJA4
Length = 1290
Score = 313 (115.2 bits), Expect = 1.3e-26, P = 1.3e-26
Identities = 79/208 (37%), Positives = 116/208 (55%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
G RK +LATNIAE S+TID I +V+D G K+ +D K ++ +L IS ANAKQR GR
Sbjct: 898 GCRKCILATNIAEASLTIDGIFFVIDPGFCKIKKYDSKRDMDSLIVAPISKANAKQRAGR 957
Query: 89 AGRVQEGVCYHLYSR-AREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNT 147
AGR G CY LY+ A + + +PEIQR L +V L++ + +N
Sbjct: 958 AGRTGPGKCYRLYTEEAYKNEMSEMSVPEIQRINLGSIVLLLKA-----------LGIND 1006
Query: 148 AFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKML 207
F + +D P ++ SL+ L + ALDD+ +LT LG +A P++P + K+L
Sbjct: 1007 -FLHF-----DFMDSPSVETLIHSLENLYYLGALDDNGYLTKLGKKMANFPMEPNLSKIL 1060
Query: 208 LMASIFSCVDPVFTVAASLGFKDAFYCP 235
L + F+C D V T+ + L ++ FY P
Sbjct: 1061 LTSLNFNCTDDVVTIVSMLSVQNIFYRP 1088
Score = 142 (55.0 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 32/111 (28%), Positives = 56/111 (50%)
Query: 235 PMIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKN--ILAQGAKSDYV 292
P + K+LL + F+C D V T+ + L ++ FY P N DK+KN I+ QG D +
Sbjct: 1054 PNLSKILLTSLNFNCTDDVVTIVSMLSVQNIFYRPQNKALLADKKKNKFIMPQG---DLI 1110
Query: 293 VLINAMQGWEQALEHNYAHDYCRENFXXXXXXXXXRDMKDQFSRTMHEMNF 343
+N W+ E+++++ +C ENF +D++ Q + N+
Sbjct: 1111 TYLNIYNKWK---ENSFSNYWCHENFIQSRALKRAQDVRKQMLSIFEKYNY 1158
>WB|WBGene00003393 [details] [associations]
symbol:mog-5 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0002009 "morphogenesis
of an epithelium" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0042127
"regulation of cell proliferation" evidence=IMP] [GO:0040020
"regulation of meiosis" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] [GO:0048589 "developmental growth" evidence=IMP]
[GO:0010172 "embryonic body morphogenesis" evidence=IMP]
[GO:0040022 "feminization of hermaphroditic germ-line"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006915
GO:GO:0002119 GO:GO:0008380 GO:GO:0018996 GO:GO:0006397
GO:GO:0040011 GO:GO:0003723 GO:GO:0042127 GO:GO:0007281
GO:GO:0048589 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0040022 GO:GO:0008026 EMBL:FO081042 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN EMBL:AF286899 PIR:T15921 RefSeq:NP_495019.1
UniGene:Cel.7556 ProteinModelPortal:Q09530 SMR:Q09530
DIP:DIP-25759N IntAct:Q09530 MINT:MINT-1046882 STRING:Q09530
PaxDb:Q09530 EnsemblMetazoa:EEED8.5 GeneID:173920
KEGG:cel:CELE_EEED8.5 UCSC:EEED8.5 CTD:173920 WormBase:EEED8.5
InParanoid:Q09530 NextBio:881669 Uniprot:Q09530
Length = 1200
Score = 312 (114.9 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 83/208 (39%), Positives = 112/208 (53%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
G RK+V+ATNIAETS+TID I YVVD G K ++ K + +L IS A AKQR GR
Sbjct: 806 GKRKVVIATNIAETSLTIDGIFYVVDPGFVKQKIYNPKSGMDSLVVTPISQAAAKQRSGR 865
Query: 89 AGRVQEGVCYHLYS-RAREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNT 147
AGR G CY LY+ RA P+PEIQRT L TL K ++ +++
Sbjct: 866 AGRTGPGKCYRLYTERAFRDEMLPTPVPEIQRTNL---ASTLLQLKAMGINN----LIDF 918
Query: 148 AFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKML 207
F +D P S+ +L L + ALD D LT LG +A+ PL+P + K+L
Sbjct: 919 DF----------MDAPPLDSMITALNTLHTLSALDGDGLLTKLGRRMAEFPLEPSLSKLL 968
Query: 208 LMASIFSCVDPVFTVAASLGFKDAFYCP 235
+M+ C + V T+ A L ++ FY P
Sbjct: 969 IMSVDLGCSEEVLTIVAMLNVQNIFYRP 996
Score = 128 (50.1 bits), Expect = 0.00010, P = 0.00010
Identities = 45/184 (24%), Positives = 83/184 (45%)
Query: 166 ASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAAS 225
AS L LK + + + +D D P PLD I + + ++ S +D +
Sbjct: 901 ASTLLQLKAMGINNLIDFDFMDAP--------PLDSMITALNTLHTL-SALDGD-GLLTK 950
Query: 226 LGFKDAFYC--PMIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNIL 283
LG + A + P + K+L+M+ C + V T+ A L ++ FY P + D++K
Sbjct: 951 LGRRMAEFPLEPSLSKLLIMSVDLGCSEEVLTIVAMLNVQNIFYRPKEKQDHADQKKAKF 1010
Query: 284 AQGAKSDYVVLINAMQGWEQALEHNYAHDYCRENFXXXXXXXXXRDMKDQFSRTM--HEM 341
Q + D++ L+ W+ H+++ +C ENF +D++ Q M H++
Sbjct: 1011 HQ-PEGDHLTLLAVYNSWKN---HHFSQPWCFENFIQVRSMKRAQDIRKQLLGIMDRHKL 1066
Query: 342 NFIS 345
+S
Sbjct: 1067 LMVS 1070
>UNIPROTKB|Q09530 [details] [associations]
symbol:mog-5 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-5" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006915
GO:GO:0002119 GO:GO:0008380 GO:GO:0018996 GO:GO:0006397
GO:GO:0040011 GO:GO:0003723 GO:GO:0042127 GO:GO:0007281
GO:GO:0048589 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0040022 GO:GO:0008026 EMBL:FO081042 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN EMBL:AF286899 PIR:T15921 RefSeq:NP_495019.1
UniGene:Cel.7556 ProteinModelPortal:Q09530 SMR:Q09530
DIP:DIP-25759N IntAct:Q09530 MINT:MINT-1046882 STRING:Q09530
PaxDb:Q09530 EnsemblMetazoa:EEED8.5 GeneID:173920
KEGG:cel:CELE_EEED8.5 UCSC:EEED8.5 CTD:173920 WormBase:EEED8.5
InParanoid:Q09530 NextBio:881669 Uniprot:Q09530
Length = 1200
Score = 312 (114.9 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 83/208 (39%), Positives = 112/208 (53%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
G RK+V+ATNIAETS+TID I YVVD G K ++ K + +L IS A AKQR GR
Sbjct: 806 GKRKVVIATNIAETSLTIDGIFYVVDPGFVKQKIYNPKSGMDSLVVTPISQAAAKQRSGR 865
Query: 89 AGRVQEGVCYHLYS-RAREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNT 147
AGR G CY LY+ RA P+PEIQRT L TL K ++ +++
Sbjct: 866 AGRTGPGKCYRLYTERAFRDEMLPTPVPEIQRTNL---ASTLLQLKAMGINN----LIDF 918
Query: 148 AFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKML 207
F +D P S+ +L L + ALD D LT LG +A+ PL+P + K+L
Sbjct: 919 DF----------MDAPPLDSMITALNTLHTLSALDGDGLLTKLGRRMAEFPLEPSLSKLL 968
Query: 208 LMASIFSCVDPVFTVAASLGFKDAFYCP 235
+M+ C + V T+ A L ++ FY P
Sbjct: 969 IMSVDLGCSEEVLTIVAMLNVQNIFYRP 996
Score = 128 (50.1 bits), Expect = 0.00010, P = 0.00010
Identities = 45/184 (24%), Positives = 83/184 (45%)
Query: 166 ASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAAS 225
AS L LK + + + +D D P PLD I + + ++ S +D +
Sbjct: 901 ASTLLQLKAMGINNLIDFDFMDAP--------PLDSMITALNTLHTL-SALDGD-GLLTK 950
Query: 226 LGFKDAFYC--PMIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNIL 283
LG + A + P + K+L+M+ C + V T+ A L ++ FY P + D++K
Sbjct: 951 LGRRMAEFPLEPSLSKLLIMSVDLGCSEEVLTIVAMLNVQNIFYRPKEKQDHADQKKAKF 1010
Query: 284 AQGAKSDYVVLINAMQGWEQALEHNYAHDYCRENFXXXXXXXXXRDMKDQFSRTM--HEM 341
Q + D++ L+ W+ H+++ +C ENF +D++ Q M H++
Sbjct: 1011 HQ-PEGDHLTLLAVYNSWKN---HHFSQPWCFENFIQVRSMKRAQDIRKQLLGIMDRHKL 1066
Query: 342 NFIS 345
+S
Sbjct: 1067 LMVS 1070
>UNIPROTKB|Q5JP46 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AL845353 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOVERGEN:HBG039428 UniGene:Hs.485060
HGNC:HGNC:2739 IPI:IPI00292510 SMR:Q5JP46 Ensembl:ENST00000383576
UCSC:uc011ijt.2 Uniprot:Q5JP46
Length = 560
Score = 305 (112.4 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 79/209 (37%), Positives = 119/209 (56%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
G RK+V+ATNIAETS+TI+ I+YV+D G K +++ + + +L S A+A QR GR
Sbjct: 185 GARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGR 244
Query: 89 AGRVQEGVCYHLYSR-AREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNT 147
AGRV G C+ LY+ A + ++ +PEIQRT L VV L+S +++
Sbjct: 245 AGRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHD-------LMHF 297
Query: 148 AFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKML 207
F LDPP ++ L+L+ L + AL+ LT G +A+LP+DP + KM+
Sbjct: 298 DF----------LDPPPYETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMI 347
Query: 208 LMASIFSCVDPVFTVAASLGFKDA-FYCP 235
L + +SC + + TVAA L ++ FY P
Sbjct: 348 LASEKYSCSEEILTVAAMLSVNNSIFYRP 376
Score = 134 (52.2 bits), Expect = 8.4e-06, P = 8.4e-06
Identities = 32/101 (31%), Positives = 50/101 (49%)
Query: 235 PMIGKMLLMASIFSCVDPVFTVAASLGFKDA-FYCPMNMEKDVDKQK-NILAQGAKSDYV 292
PM+ KM+L + +SC + + TVAA L ++ FY P + D + N G D++
Sbjct: 341 PMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNARVNFFLPGG--DHL 398
Query: 293 VLINAMQGWEQALEHNYAHDYCRENFXXXXXXXXXRDMKDQ 333
VL+N W E Y+ +C ENF RD+++Q
Sbjct: 399 VLLNVYTQWA---ESGYSSQWCYENFVQFRSMRRARDVREQ 436
>UNIPROTKB|Q5SQH5 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:CH471081 GO:GO:0003676 EMBL:BX119957 EMBL:CR753328
EMBL:CR759778 EMBL:AL732442 EMBL:BX908728 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
UniGene:Hs.485060 HGNC:HGNC:2739 EMBL:CR788240 EMBL:AL662798
EMBL:CU013522 IPI:IPI00644906 SMR:Q5SQH5 Ensembl:ENST00000376437
Ensembl:ENST00000414052 Ensembl:ENST00000445379
Ensembl:ENST00000449861 Ensembl:ENST00000451748
Ensembl:ENST00000453879 UCSC:uc003nqy.3 Uniprot:Q5SQH5
Length = 560
Score = 305 (112.4 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 79/209 (37%), Positives = 119/209 (56%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
G RK+V+ATNIAETS+TI+ I+YV+D G K +++ + + +L S A+A QR GR
Sbjct: 185 GARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGR 244
Query: 89 AGRVQEGVCYHLYSR-AREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNT 147
AGRV G C+ LY+ A + ++ +PEIQRT L VV L+S +++
Sbjct: 245 AGRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHD-------LMHF 297
Query: 148 AFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKML 207
F LDPP ++ L+L+ L + AL+ LT G +A+LP+DP + KM+
Sbjct: 298 DF----------LDPPPYETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMI 347
Query: 208 LMASIFSCVDPVFTVAASLGFKDA-FYCP 235
L + +SC + + TVAA L ++ FY P
Sbjct: 348 LASEKYSCSEEILTVAAMLSVNNSIFYRP 376
Score = 134 (52.2 bits), Expect = 8.4e-06, P = 8.4e-06
Identities = 32/101 (31%), Positives = 50/101 (49%)
Query: 235 PMIGKMLLMASIFSCVDPVFTVAASLGFKDA-FYCPMNMEKDVDKQK-NILAQGAKSDYV 292
PM+ KM+L + +SC + + TVAA L ++ FY P + D + N G D++
Sbjct: 341 PMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNARVNFFLPGG--DHL 398
Query: 293 VLINAMQGWEQALEHNYAHDYCRENFXXXXXXXXXRDMKDQ 333
VL+N W E Y+ +C ENF RD+++Q
Sbjct: 399 VLLNVYTQWA---ESGYSSQWCYENFVQFRSMRRARDVREQ 436
>DICTYBASE|DDB_G0270110 [details] [associations]
symbol:dhx33 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
dictyBase:DDB_G0270110 GO:GO:0005524 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K14781 RefSeq:XP_646548.1
EnsemblProtists:DDB0233404 GeneID:8617514 KEGG:ddi:DDB_G0270110
InParanoid:Q55CD3 OMA:EICINRE Uniprot:Q55CD3
Length = 730
Score = 231 (86.4 bits), Expect = 1.8e-26, Sum P(2) = 1.8e-26
Identities = 57/124 (45%), Positives = 74/124 (59%)
Query: 12 CPS-SGLKHLQNKSVFEL---GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKD 67
CP S L Q VFE G RK++LATNIAETS+TI+ I YVVD G K F+ K
Sbjct: 333 CPIFSALPQEQQMKVFEKAPKGSRKVILATNIAETSLTINGIRYVVDSGAVKSKIFNPKI 392
Query: 68 NIATLKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDEVVR 127
I +L IS A+AKQR GRAGR EG CY LY++ + +PEI+R+ + V+
Sbjct: 393 GIDSLNIIPISKASAKQRTGRAGREFEGKCYRLYTQETFEKLDTSSIPEIKRSNIANVIL 452
Query: 128 TLES 131
L++
Sbjct: 453 QLKT 456
Score = 130 (50.8 bits), Expect = 1.8e-26, Sum P(2) = 1.8e-26
Identities = 29/76 (38%), Positives = 42/76 (55%)
Query: 160 LDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKMLLMASIFSCVDPV 219
L+ P ASV SL+LL +DA+ D+ LT LG +A PLDP K L+ + F C + V
Sbjct: 468 LESPPVASVIKSLELLFCLDAISDNGSLTELGKKMALFPLDPMYSKTLIKSIEFECSEEV 527
Query: 220 FTVAASLGFKDAFYCP 235
+ + L + F+ P
Sbjct: 528 LIIISILSVESIFFTP 543
Score = 97 (39.2 bits), Expect = 5.1e-23, Sum P(2) = 5.1e-23
Identities = 25/122 (20%), Positives = 55/122 (45%)
Query: 201 PQIGKMLLMASIFSCVDPVFTVAA--SLGFKDAFYC--PMIGKMLLMASIFSCVDPVFTV 256
P + ++ + C+D + + LG K A + PM K L+ + F C + V +
Sbjct: 471 PPVASVIKSLELLFCLDAISDNGSLTELGKKMALFPLDPMYSKTLIKSIEFECSEEVLII 530
Query: 257 AASLGFKDAFYCPMNMEKDVDKQKNILAQGAKSDYVVLINAMQGWEQALEHNYAHDYCRE 316
+ L + F+ P +K+V+ K I D++ +N + ++++ + +C +
Sbjct: 531 ISILSVESIFFTPKEKKKEVEDVKKIFFS-PDGDHITFLNVFREFQKS-KPQQQQQWCFD 588
Query: 317 NF 318
+F
Sbjct: 589 HF 590
Score = 38 (18.4 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 100 LYSRAREQTFQDYPLPEIQRTRLDEVVRTL 129
LY R+ Q Y EIQ+ +D + T+
Sbjct: 246 LYIEGRQFPVQIYYTEEIQKDYVDAALITV 275
>WB|WBGene00021365 [details] [associations]
symbol:smgl-2 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0032940 "secretion by cell" evidence=IMP]
InterPro:IPR001650 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0009792 GO:GO:0006898 GO:GO:0040007 GO:GO:0002119
GO:GO:0032940 GO:GO:0010171 GO:GO:0040011 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00700000104421 EMBL:FO081788 RefSeq:NP_500405.3
ProteinModelPortal:Q9N437 SMR:Q9N437 PaxDb:Q9N437
EnsemblMetazoa:Y37E11AM.1 GeneID:177135 KEGG:cel:CELE_Y37E11AM.1
UCSC:Y37E11AM.1 CTD:177135 WormBase:Y37E11AM.1 InParanoid:Q9N437
OMA:LRADVMC NextBio:895494 Uniprot:Q9N437
Length = 1018
Score = 284 (105.0 bits), Expect = 2.0e-26, Sum P(2) = 2.0e-26
Identities = 76/232 (32%), Positives = 117/232 (50%)
Query: 8 WFLQCPSSGLKHLQNKSVFE---LGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFD 64
W + S L + VF+ +G+RK +L+TN+AETS+TID I +V+D GK + +
Sbjct: 321 WIILMLHSTLSVEEQDKVFDQAPVGIRKCILSTNVAETSVTIDGIRFVIDSGKVNLIKHE 380
Query: 65 VKDNIATLKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDE 124
L W+S A+A QR+GRAGR G+CY LYS+ + + D+ + EI R L E
Sbjct: 381 PGTGTQKLTEFWVSKASANQRKGRAGRTGPGICYRLYSQEQFEKMDDFTVSEINRVSLQE 440
Query: 125 VVRTLESKKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDD 184
+ KM+S LN P + P ++ P + L++L+ L D
Sbjct: 441 MA-------LKMIS------LNLGLDPRTF-P--FIEKPSEDVLNEGLEVLKFQRVLRSD 484
Query: 185 EH----LTPLGYHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAF 232
LT LG ++KLP++ I KML+ + ++ + TVAA L + F
Sbjct: 485 RGDILTLTALGNMVSKLPVEVPIAKMLVYGCVVDELEVMLTVAAGLSVQSPF 536
Score = 53 (23.7 bits), Expect = 2.0e-26, Sum P(2) = 2.0e-26
Identities = 22/110 (20%), Positives = 45/110 (40%)
Query: 237 IGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQGAKSDYVVLIN 296
I KML+ + ++ + TVAA L + F E ++ +++ L D LI+
Sbjct: 507 IAKMLVYGCVVDELEVMLTVAAGLSVQSPFTNRSYRELEIVERRASLTSPL-GDPFTLIS 565
Query: 297 AMQGW--EQALEHNYAHDYCRENFXXXXXXXXXRDMKDQFSRTMHEMNFI 344
+ W ++A E A + EN ++ Q+ + + + +
Sbjct: 566 IFREWVLQKAFEGT-ARRWTMENGIDEHRLYEISKLRAQYRQILEDAGLV 614
>FB|FBgn0052533 [details] [associations]
symbol:CG32533 species:7227 "Drosophila melanogaster"
[GO:0004386 "helicase activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:AE014298 GO:GO:0006200 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
OMA:DSDQVFH GeneTree:ENSGT00700000104421 EMBL:AY058623
RefSeq:NP_728244.1 UniGene:Dm.4145 SMR:Q9VWI5
EnsemblMetazoa:FBtr0074786 GeneID:32933 KEGG:dme:Dmel_CG32533
UCSC:CG32533-RA FlyBase:FBgn0052533 InParanoid:Q9VWI5
OrthoDB:EOG4V9S5G GenomeRNAi:32933 NextBio:781096 Uniprot:Q9VWI5
Length = 1139
Score = 255 (94.8 bits), Expect = 2.4e-26, Sum P(2) = 2.4e-26
Identities = 68/215 (31%), Positives = 110/215 (51%)
Query: 8 WFLQCPSSGLKHLQNKSVFEL---GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFD 64
W + SG VF+ G+RK +++TNIAETS+T+D + +VVD GK K NFD
Sbjct: 402 WLVLPLHSGQAIADQSKVFDYAPEGMRKCIVSTNIAETSLTVDGVRFVVDSGKVKEMNFD 461
Query: 65 VKDNIATLKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDE 124
LK W+S ++A QR+GRAGR GVC+ LY+ + F+ YP PEI R LD
Sbjct: 462 ATCKGQRLKEFWVSKSSADQRKGRAGRTGPGVCFRLYTAEQYNAFEAYPTPEIYRVPLDT 521
Query: 125 VVRTLESKKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDD 184
++ + S V R F + T + + +L ++ + K+ L +L +
Sbjct: 522 MLLQMVSMGLPDV-RAFP-FIEAPETERI--EQTILALKQHCALSVEEKITPLGRSLANL 577
Query: 185 EHLTPLGYHLAKLPLDPQIGKMLLMASIFSCVDPV 219
+G L + P++ ++L +A++ S +P+
Sbjct: 578 PVELSIGKMLLMGSVFPEVEQLLTLAAMLSVQNPL 612
Score = 126 (49.4 bits), Expect = 0.00016, P = 0.00016
Identities = 27/71 (38%), Positives = 45/71 (63%)
Query: 160 LDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKMLLMASIFSCVDPV 219
++ P+ ++ ++ L+ AL +E +TPLG LA LP++ IGKMLLM S+F V+ +
Sbjct: 540 IEAPETERIEQTILALKQHCALSVEEKITPLGRSLANLPVELSIGKMLLMGSVFPEVEQL 599
Query: 220 FTVAASLGFKD 230
T+AA L ++
Sbjct: 600 LTLAAMLSVQN 610
Score = 83 (34.3 bits), Expect = 2.4e-26, Sum P(2) = 2.4e-26
Identities = 24/109 (22%), Positives = 45/109 (41%)
Query: 237 IGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQGAKSDYVVLIN 296
IGKMLLM S+F V+ + T+AA L ++ + ++ +++ L + D L+
Sbjct: 583 IGKMLLMGSVFPEVEQLLTLAAMLSVQNPLTNRAHTDQRCVRERESL-ESDHGDLFTLVR 641
Query: 297 AMQGWEQA-LEHNYAHDYCRENFXXXXXXXXXRDMKDQFSRTMHEMNFI 344
W Q + + +CR ++ QF R + +
Sbjct: 642 LYNVWVQLKMRRDGTRQWCRRLGIEEQRFYEVTKLRQQFQRILESCGMV 690
>DICTYBASE|DDB_G0269306 [details] [associations]
symbol:dhx35 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0269306 GO:GO:0005524
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K13117 OMA:NIFVVPP
RefSeq:XP_645858.1 ProteinModelPortal:Q55EC3
EnsemblProtists:DDB0233419 GeneID:8616802 KEGG:ddi:DDB_G0269306
InParanoid:Q55EC3 Uniprot:Q55EC3
Length = 716
Score = 305 (112.4 bits), Expect = 3.2e-26, P = 3.2e-26
Identities = 83/227 (36%), Positives = 123/227 (54%)
Query: 15 SGLKHLQNKSVFE-LG----VRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNI 69
SGL + VFE +G +RKI+++TNIAETSITID +VYVVDCG K+ ++D + +
Sbjct: 338 SGLSINKQIKVFESVGDSKKIRKIIISTNIAETSITIDGVVYVVDCGFVKIKSYDSESGL 397
Query: 70 ATLKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAR-EQTFQDYPLPEIQRTRLDEVVRT 128
+L S ++A QR GRAGR + G CY LY+ E+ D +PEIQR+ L +
Sbjct: 398 ESLVIVPTSKSSANQRAGRAGRSRAGKCYRLYTELTYEKLLPDQTIPEIQRSNLTNTILQ 457
Query: 129 LESKKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLT 188
L++ + LN F + PP + ++ L++L + ALDD+ LT
Sbjct: 458 LKALGIDNI-------LNFDF---------ISQPPSSSLIR-GLEVLYGLGALDDNGKLT 500
Query: 189 -PLGYHLAKLPLDPQIGKMLLMASI--FSCVDPVFTVAASLGFKDAF 232
P G +A+ P DP KM++ +S F+C D T+ A L + F
Sbjct: 501 NPTGMIMAEFPTDPTFSKMIIQSSSNGFNCSDECITITAMLNIQGLF 547
>UNIPROTKB|O83538 [details] [associations]
symbol:TP_0526 "ATP-dependent helicase (HrpA)"
species:243276 "Treponema pallidum subsp. pallidum str. Nichols"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AE000520
GenomeReviews:AE000520_GR PIR:H71312 RefSeq:NP_218966.1
ProteinModelPortal:O83538 IntAct:O83538 GeneID:2610764
KEGG:tpa:TP0526 PATRIC:20531093 OMA:WEYRERF ProtClustDB:CLSK507866
Uniprot:O83538
Length = 668
Score = 245 (91.3 bits), Expect = 4.0e-26, Sum P(3) = 4.0e-26
Identities = 60/127 (47%), Positives = 78/127 (61%)
Query: 4 FFQIWFLQCPSSG-LKHLQNKSVFE---LGVRKIVLATNIAETSITIDDIVYVVDCGKTK 59
+F+ FL P G L + + VF G RK+V+ATNIAETSITIDD+ V+D G K
Sbjct: 250 WFRKLFL-LPLYGRLSKEEQEQVFNRAPFGKRKVVIATNIAETSITIDDVTTVIDSGLVK 308
Query: 60 MSNFDVKDNIATLKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYPLPEIQR 119
+++++ A+L IS A+ QRRGRAGRV+ G CY LYSR + + Y L EI R
Sbjct: 309 LNSYNPLSYTASLDETPISQASCNQRRGRAGRVRAGTCYRLYSRDDFEQREPYTLEEIYR 368
Query: 120 TRLDEVV 126
T L EVV
Sbjct: 369 TDLSEVV 375
Score = 76 (31.8 bits), Expect = 4.0e-26, Sum P(3) = 4.0e-26
Identities = 21/69 (30%), Positives = 34/69 (49%)
Query: 160 LDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKMLLMA--SIFSCVD 217
+ PP + + LRL+ AL+DD L+ +G + PL P+ +M++ A +D
Sbjct: 392 ISPPGTHGIIGAEDTLRLLGALEDDRSLSEIGKMMCLFPLGPRQSRMIVEALRRYPHSID 451
Query: 218 PVFTVAASL 226
V AA L
Sbjct: 452 DVLIAAAFL 460
Score = 52 (23.4 bits), Expect = 4.0e-26, Sum P(3) = 4.0e-26
Identities = 18/94 (19%), Positives = 35/94 (37%)
Query: 250 VDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQGAKSDYVVLINAMQGWEQALEHNY 309
+D V AA L + + E+ K + D+V + + + Q E+N
Sbjct: 450 IDDVLIAAAFLSARSPLIFSEDQEEKTKKAHGTFSD-PMGDFVSFLRIYRAYAQ--ENN- 505
Query: 310 AHDYCRENFXXXXXXXXXRDMKDQFSRTMHEMNF 343
H +C+ + ++K+Q + M F
Sbjct: 506 KHSFCQHFYLDERIMAEISNIKEQLELIVSGMGF 539
>UNIPROTKB|O60231 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 EMBL:BA000025 GO:GO:0008380 GO:GO:0006397
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AL845353 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12813 GO:GO:0003724
HOVERGEN:HBG039428 OMA:GTLHREF EMBL:AB001601 EMBL:AB011149
EMBL:BC008825 EMBL:BC009392 IPI:IPI00552073 RefSeq:NP_001157711.1
RefSeq:NP_003578.2 UniGene:Hs.485060 ProteinModelPortal:O60231
SMR:O60231 IntAct:O60231 MINT:MINT-5003862 STRING:O60231
PhosphoSite:O60231 PaxDb:O60231 PRIDE:O60231 DNASU:8449
Ensembl:ENST00000376442 Ensembl:ENST00000383577
Ensembl:ENST00000417308 Ensembl:ENST00000421095
Ensembl:ENST00000424672 Ensembl:ENST00000451456
Ensembl:ENST00000458094 GeneID:8449 KEGG:hsa:8449 UCSC:uc003nqz.3
CTD:8449 GeneCards:GC06M030620 HGNC:HGNC:2739 HPA:HPA051455
MIM:603405 neXtProt:NX_O60231 PharmGKB:PA27205 InParanoid:O60231
OrthoDB:EOG4VHK5Q PhylomeDB:O60231 GenomeRNAi:8449 NextBio:31614
ArrayExpress:O60231 Bgee:O60231 CleanEx:HS_DHX16
Genevestigator:O60231 GermOnline:ENSG00000204560 Uniprot:O60231
Length = 1041
Score = 305 (112.4 bits), Expect = 6.6e-26, P = 6.6e-26
Identities = 79/209 (37%), Positives = 119/209 (56%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
G RK+V+ATNIAETS+TI+ I+YV+D G K +++ + + +L S A+A QR GR
Sbjct: 666 GARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGR 725
Query: 89 AGRVQEGVCYHLYSR-AREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNT 147
AGRV G C+ LY+ A + ++ +PEIQRT L VV L+S +++
Sbjct: 726 AGRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHD-------LMHF 778
Query: 148 AFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKML 207
F LDPP ++ L+L+ L + AL+ LT G +A+LP+DP + KM+
Sbjct: 779 DF----------LDPPPYETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMI 828
Query: 208 LMASIFSCVDPVFTVAASLGFKDA-FYCP 235
L + +SC + + TVAA L ++ FY P
Sbjct: 829 LASEKYSCSEEILTVAAMLSVNNSIFYRP 857
Score = 134 (52.2 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 32/101 (31%), Positives = 50/101 (49%)
Query: 235 PMIGKMLLMASIFSCVDPVFTVAASLGFKDA-FYCPMNMEKDVDKQK-NILAQGAKSDYV 292
PM+ KM+L + +SC + + TVAA L ++ FY P + D + N G D++
Sbjct: 822 PMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNARVNFFLPGG--DHL 879
Query: 293 VLINAMQGWEQALEHNYAHDYCRENFXXXXXXXXXRDMKDQ 333
VL+N W E Y+ +C ENF RD+++Q
Sbjct: 880 VLLNVYTQWA---ESGYSSQWCYENFVQFRSMRRARDVREQ 917
>UNIPROTKB|F1PGL2 [details] [associations]
symbol:DHX16 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12813
GeneTree:ENSGT00700000104241 OMA:GTLHREF CTD:8449 EMBL:AAEX03008197
RefSeq:XP_538827.2 Ensembl:ENSCAFT00000000685 GeneID:481706
KEGG:cfa:481706 Uniprot:F1PGL2
Length = 1042
Score = 305 (112.4 bits), Expect = 6.6e-26, P = 6.6e-26
Identities = 79/209 (37%), Positives = 119/209 (56%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
G RK+V+ATNIAETS+TI+ I+YV+D G K +++ + + +L S A+A QR GR
Sbjct: 667 GARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGR 726
Query: 89 AGRVQEGVCYHLYSR-AREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNT 147
AGRV G C+ LY+ A + ++ +PEIQRT L VV L+S +++
Sbjct: 727 AGRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHD-------LMHF 779
Query: 148 AFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKML 207
F LDPP ++ L+L+ L + AL+ LT G +A+LP+DP + KM+
Sbjct: 780 DF----------LDPPPYETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMI 829
Query: 208 LMASIFSCVDPVFTVAASLGFKDA-FYCP 235
L + +SC + + TVAA L ++ FY P
Sbjct: 830 LASEKYSCSEEILTVAAMLSVNNSIFYRP 858
Score = 134 (52.2 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 32/101 (31%), Positives = 50/101 (49%)
Query: 235 PMIGKMLLMASIFSCVDPVFTVAASLGFKDA-FYCPMNMEKDVDKQK-NILAQGAKSDYV 292
PM+ KM+L + +SC + + TVAA L ++ FY P + D + N G D++
Sbjct: 823 PMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNARVNFFLPGG--DHL 880
Query: 293 VLINAMQGWEQALEHNYAHDYCRENFXXXXXXXXXRDMKDQ 333
VL+N W E Y+ +C ENF RD+++Q
Sbjct: 881 VLLNVYTQWA---ESGYSSQWCYENFVQFRSMRRARDVREQ 918
>RGD|1302963 [details] [associations]
symbol:Dhx16 "DEAH (Asp-Glu-Ala-His) box polypeptide 16"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1302963 GO:GO:0005524 GO:GO:0003676 EMBL:BX883048
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12813
HOVERGEN:HBG039428 CTD:8449 EMBL:CH474118 IPI:IPI00421973
RefSeq:NP_997661.1 UniGene:Rn.6832 GeneID:294232 KEGG:rno:294232
UCSC:RGD:1302963 NextBio:637799 Genevestigator:Q6MG13
Uniprot:Q6MG13
Length = 1044
Score = 305 (112.4 bits), Expect = 6.7e-26, P = 6.7e-26
Identities = 79/209 (37%), Positives = 119/209 (56%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
G RK+V+ATNIAETS+TI+ I+YV+D G K +++ + + +L S A+A QR GR
Sbjct: 669 GARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGR 728
Query: 89 AGRVQEGVCYHLYSR-AREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNT 147
AGRV G C+ LY+ A + ++ +PEIQRT L VV L+S +++
Sbjct: 729 AGRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHD-------LMHF 781
Query: 148 AFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKML 207
F LDPP ++ L+L+ L + AL+ LT G +A+LP+DP + KM+
Sbjct: 782 DF----------LDPPPYETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMI 831
Query: 208 LMASIFSCVDPVFTVAASLGFKDA-FYCP 235
L + +SC + + TVAA L ++ FY P
Sbjct: 832 LASEKYSCSEEILTVAAMLSVNNSIFYRP 860
Score = 134 (52.2 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 32/101 (31%), Positives = 50/101 (49%)
Query: 235 PMIGKMLLMASIFSCVDPVFTVAASLGFKDA-FYCPMNMEKDVDKQK-NILAQGAKSDYV 292
PM+ KM+L + +SC + + TVAA L ++ FY P + D + N G D++
Sbjct: 825 PMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNARVNFFLPGG--DHL 882
Query: 293 VLINAMQGWEQALEHNYAHDYCRENFXXXXXXXXXRDMKDQ 333
VL+N W E Y+ +C ENF RD+++Q
Sbjct: 883 VLLNVYTQWA---ESGYSSQWCYENFVQFRSMRRARDVREQ 920
>UNIPROTKB|E1BF68 [details] [associations]
symbol:DHX16 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12813 GeneTree:ENSGT00700000104241 OMA:GTLHREF
CTD:8449 EMBL:DAAA02055402 IPI:IPI00691986 RefSeq:NP_001193139.1
UniGene:Bt.22201 PRIDE:E1BF68 Ensembl:ENSBTAT00000009148
GeneID:506405 KEGG:bta:506405 NextBio:20867594 Uniprot:E1BF68
Length = 1045
Score = 305 (112.4 bits), Expect = 6.7e-26, P = 6.7e-26
Identities = 79/209 (37%), Positives = 119/209 (56%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
G RK+V+ATNIAETS+TI+ I+YV+D G K +++ + + +L S A+A QR GR
Sbjct: 670 GARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGR 729
Query: 89 AGRVQEGVCYHLYSR-AREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNT 147
AGRV G C+ LY+ A + ++ +PEIQRT L VV L+S +++
Sbjct: 730 AGRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHD-------LMHF 782
Query: 148 AFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKML 207
F LDPP ++ L+L+ L + AL+ LT G +A+LP+DP + KM+
Sbjct: 783 DF----------LDPPPYETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMI 832
Query: 208 LMASIFSCVDPVFTVAASLGFKDA-FYCP 235
L + +SC + + TVAA L ++ FY P
Sbjct: 833 LASEKYSCSEEILTVAAMLSVNNSIFYRP 861
Score = 134 (52.2 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 32/101 (31%), Positives = 50/101 (49%)
Query: 235 PMIGKMLLMASIFSCVDPVFTVAASLGFKDA-FYCPMNMEKDVDKQK-NILAQGAKSDYV 292
PM+ KM+L + +SC + + TVAA L ++ FY P + D + N G D++
Sbjct: 826 PMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNARVNFFLPGG--DHL 883
Query: 293 VLINAMQGWEQALEHNYAHDYCRENFXXXXXXXXXRDMKDQ 333
VL+N W E Y+ +C ENF RD+++Q
Sbjct: 884 VLLNVYTQWA---ESGYSSQWCYENFVQFRSMRRARDVREQ 921
>UNIPROTKB|F1RU83 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:GTLHREF EMBL:CU480634
Ensembl:ENSSSCT00000001498 Uniprot:F1RU83
Length = 1045
Score = 305 (112.4 bits), Expect = 6.7e-26, P = 6.7e-26
Identities = 79/209 (37%), Positives = 119/209 (56%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
G RK+V+ATNIAETS+TI+ I+YV+D G K +++ + + +L S A+A QR GR
Sbjct: 670 GARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGR 729
Query: 89 AGRVQEGVCYHLYSR-AREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNT 147
AGRV G C+ LY+ A + ++ +PEIQRT L VV L+S +++
Sbjct: 730 AGRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHD-------LMHF 782
Query: 148 AFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKML 207
F LDPP ++ L+L+ L + AL+ LT G +A+LP+DP + KM+
Sbjct: 783 DF----------LDPPPYETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMI 832
Query: 208 LMASIFSCVDPVFTVAASLGFKDA-FYCP 235
L + +SC + + TVAA L ++ FY P
Sbjct: 833 LASEKYSCSEEILTVAAMLSVNNSIFYRP 861
Score = 134 (52.2 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 32/101 (31%), Positives = 50/101 (49%)
Query: 235 PMIGKMLLMASIFSCVDPVFTVAASLGFKDA-FYCPMNMEKDVDKQK-NILAQGAKSDYV 292
PM+ KM+L + +SC + + TVAA L ++ FY P + D + N G D++
Sbjct: 826 PMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNARVNFFLPGG--DHL 883
Query: 293 VLINAMQGWEQALEHNYAHDYCRENFXXXXXXXXXRDMKDQ 333
VL+N W E Y+ +C ENF RD+++Q
Sbjct: 884 VLLNVYTQWA---ESGYSSQWCYENFVQFRSMRRARDVREQ 921
>UNIPROTKB|Q767K6 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0008380
GO:GO:0006397 GO:GO:0003676 EMBL:AB113357 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AB113356 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 HOVERGEN:HBG039428 CTD:8449 OrthoDB:EOG4VHK5Q
RefSeq:NP_001116578.1 UniGene:Ssc.15273 ProteinModelPortal:Q767K6
GeneID:100144456 KEGG:ssc:100144456 Uniprot:Q767K6
Length = 1045
Score = 305 (112.4 bits), Expect = 6.7e-26, P = 6.7e-26
Identities = 79/209 (37%), Positives = 119/209 (56%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
G RK+V+ATNIAETS+TI+ I+YV+D G K +++ + + +L S A+A QR GR
Sbjct: 670 GARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGR 729
Query: 89 AGRVQEGVCYHLYSR-AREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNT 147
AGRV G C+ LY+ A + ++ +PEIQRT L VV L+S +++
Sbjct: 730 AGRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHD-------LMHF 782
Query: 148 AFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKML 207
F LDPP ++ L+L+ L + AL+ LT G +A+LP+DP + KM+
Sbjct: 783 DF----------LDPPPYETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMI 832
Query: 208 LMASIFSCVDPVFTVAASLGFKDA-FYCP 235
L + +SC + + TVAA L ++ FY P
Sbjct: 833 LASEKYSCSEEILTVAAMLSVNNSIFYRP 861
Score = 134 (52.2 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 32/101 (31%), Positives = 50/101 (49%)
Query: 235 PMIGKMLLMASIFSCVDPVFTVAASLGFKDA-FYCPMNMEKDVDKQK-NILAQGAKSDYV 292
PM+ KM+L + +SC + + TVAA L ++ FY P + D + N G D++
Sbjct: 826 PMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNARVNFFLPGG--DHL 883
Query: 293 VLINAMQGWEQALEHNYAHDYCRENFXXXXXXXXXRDMKDQ 333
VL+N W E Y+ +C ENF RD+++Q
Sbjct: 884 VLLNVYTQWA---ESGYSSQWCYENFVQFRSMRRARDVREQ 921
>WB|WBGene00018967 [details] [associations]
symbol:F56D2.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0016246 "RNA interference" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0042127
"regulation of cell proliferation" evidence=IMP] [GO:0040020
"regulation of meiosis" evidence=IMP] [GO:0040022 "feminization of
hermaphroditic germ-line" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0016246
GO:GO:0008380 GO:GO:0006397 GO:GO:0040011 GO:GO:0003676
GO:GO:0042127 GO:GO:0040035 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0040022 HOGENOM:HOG000175261 EMBL:FO080358
KO:K12820 PIR:T16482 RefSeq:NP_741147.1 ProteinModelPortal:Q20875
SMR:Q20875 STRING:Q20875 PaxDb:Q20875 PRIDE:Q20875
EnsemblMetazoa:F56D2.6a.1 EnsemblMetazoa:F56D2.6a.2 GeneID:175771
KEGG:cel:CELE_F56D2.6 UCSC:F56D2.6a CTD:175771 WormBase:F56D2.6a
GeneTree:ENSGT00650000093246 InParanoid:Q20875 OMA:TVLQIHA
NextBio:889592 ArrayExpress:Q20875 Uniprot:Q20875
Length = 739
Score = 301 (111.0 bits), Expect = 9.3e-26, P = 9.3e-26
Identities = 76/206 (36%), Positives = 115/206 (55%)
Query: 31 RKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAG 90
RK V++TNIAETS+TID +V+V+D G +K ++ + + +L IS A+A QR GRAG
Sbjct: 359 RKCVISTNIAETSLTIDGVVFVIDPGFSKQKVYNPRIRVESLLVCPISKASAMQRAGRAG 418
Query: 91 RVQEGVCYHLYSR-AREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNTAF 149
R + G C+ LY+ A QD PEI R+ L VV L+ KK L T
Sbjct: 419 RTKPGKCFRLYTETAYGSEMQDQTYPEILRSNLGSVV--LQLKK-----------LGTED 465
Query: 150 TPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKMLLM 209
+ +DPP P ++ +L+LL + A++DD LT LG +A+ PLDPQ+ KML+
Sbjct: 466 LVHF----DFMDPPAPETLMRALELLNYLQAINDDGELTELGSLMAEFPLDPQLAKMLIT 521
Query: 210 ASIFSCVDPVFTVAASLGFKDAFYCP 235
++ +C + + ++ A L + P
Sbjct: 522 STELNCSNEILSITAMLSVPQCWVRP 547
>UNIPROTKB|Q20875 [details] [associations]
symbol:F56D2.6 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase F56D2.6" species:6239 "Caenorhabditis
elegans" [GO:0030686 "90S preribosome" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] [GO:0006364 "rRNA processing"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0016246
GO:GO:0008380 GO:GO:0006397 GO:GO:0040011 GO:GO:0003676
GO:GO:0042127 GO:GO:0040035 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0040022 HOGENOM:HOG000175261 EMBL:FO080358
KO:K12820 PIR:T16482 RefSeq:NP_741147.1 ProteinModelPortal:Q20875
SMR:Q20875 STRING:Q20875 PaxDb:Q20875 PRIDE:Q20875
EnsemblMetazoa:F56D2.6a.1 EnsemblMetazoa:F56D2.6a.2 GeneID:175771
KEGG:cel:CELE_F56D2.6 UCSC:F56D2.6a CTD:175771 WormBase:F56D2.6a
GeneTree:ENSGT00650000093246 InParanoid:Q20875 OMA:TVLQIHA
NextBio:889592 ArrayExpress:Q20875 Uniprot:Q20875
Length = 739
Score = 301 (111.0 bits), Expect = 9.3e-26, P = 9.3e-26
Identities = 76/206 (36%), Positives = 115/206 (55%)
Query: 31 RKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAG 90
RK V++TNIAETS+TID +V+V+D G +K ++ + + +L IS A+A QR GRAG
Sbjct: 359 RKCVISTNIAETSLTIDGVVFVIDPGFSKQKVYNPRIRVESLLVCPISKASAMQRAGRAG 418
Query: 91 RVQEGVCYHLYSR-AREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNTAF 149
R + G C+ LY+ A QD PEI R+ L VV L+ KK L T
Sbjct: 419 RTKPGKCFRLYTETAYGSEMQDQTYPEILRSNLGSVV--LQLKK-----------LGTED 465
Query: 150 TPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKMLLM 209
+ +DPP P ++ +L+LL + A++DD LT LG +A+ PLDPQ+ KML+
Sbjct: 466 LVHF----DFMDPPAPETLMRALELLNYLQAINDDGELTELGSLMAEFPLDPQLAKMLIT 521
Query: 210 ASIFSCVDPVFTVAASLGFKDAFYCP 235
++ +C + + ++ A L + P
Sbjct: 522 STELNCSNEILSITAMLSVPQCWVRP 547
>POMBASE|SPBC1711.17 [details] [associations]
symbol:prp16 "ATP-dependent RNA helicase Prp16
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000350
"generation of catalytic spliceosome for second transesterification
step" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005681 "spliceosomal
complex" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 PomBase:SPBC1711.17 GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0005681 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
KO:K12815 GO:GO:0000350 OMA:PSRSTWE PIR:T39724 RefSeq:NP_595890.2
ProteinModelPortal:Q9P774 IntAct:Q9P774 EnsemblFungi:SPBC1711.17.1
GeneID:2540006 KEGG:spo:SPBC1711.17 OrthoDB:EOG4GQTD2
NextBio:20801149 Uniprot:Q9P774
Length = 1173
Score = 304 (112.1 bits), Expect = 1.0e-25, P = 1.0e-25
Identities = 80/210 (38%), Positives = 112/210 (53%)
Query: 27 ELGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRR 86
E GVRK+V+ATNIAETS+T+ I YVVD G K+ ++ K I TL+ IS ANA QR
Sbjct: 755 EPGVRKVVVATNIAETSLTVHGISYVVDTGYCKLKMYNSKLGIDTLQVTPISQANANQRA 814
Query: 87 GRAGRVQEGVCYHLYSR-AREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVML 145
GRAGR G+ Y LY+ A + + LPEIQRT L V L+S + +S F M
Sbjct: 815 GRAGRTGPGIAYRLYTEMAYIREMFETTLPEIQRTNLSNTVLILKSLGVEEISD-FDFM- 872
Query: 146 NTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGK 205
D P ++ SL L + ALD+ LT LG ++ P+DP + K
Sbjct: 873 ---------------DRPPNDTLMASLYELWTLGALDNFGKLTTLGKKMSLFPMDPSLSK 917
Query: 206 MLLMASIFSCVDPVFTVAASLGFKDAFYCP 235
++++A + C + + T+ + L FY P
Sbjct: 918 LIIIAEDYKCTEEIITIVSMLSVPSVFYRP 947
Score = 127 (49.8 bits), Expect = 0.00013, P = 0.00013
Identities = 35/141 (24%), Positives = 69/141 (48%)
Query: 208 LMASIFS-----CVDPVFTVAASLGFKDAFYC--PMIGKMLLMASIFSCVDPVFTVAASL 260
LMAS++ +D F +LG K + + P + K++++A + C + + T+ + L
Sbjct: 880 LMASLYELWTLGALDN-FGKLTTLGKKMSLFPMDPSLSKLIIIAEDYKCTEEIITIVSML 938
Query: 261 GFKDAFYCPMNM--EKDVDKQK-NILAQGAKSDYVVLINAMQGWEQALEHNYAHDYCREN 317
FY P E D ++K N+ +SD+++L+N Q W++ + Y++ +C ++
Sbjct: 939 SVPSVFYRPKERAEESDAAREKFNV----PESDHLMLLNIYQHWQR---NGYSNSWCSKH 991
Query: 318 FXXXXXXXXXRDMKDQFSRTM 338
F RD++ Q M
Sbjct: 992 FLHSKTLKRARDIRQQLVEIM 1012
>POMBASE|SPAPB1A10.06c [details] [associations]
symbol:SPAPB1A10.06c "ATP-dependent RNA helicase Dhr1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISM] [GO:0005524 "ATP binding" evidence=ISM] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0030490 "maturation of SSU-rRNA" evidence=ISO] [GO:0032040
"small-subunit processome" evidence=ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPAPB1A10.06c
GO:GO:0005524 EMBL:CU329670 GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 GO:GO:0032040
GO:GO:0030490 HOGENOM:HOG000201240 KO:K14780 OMA:HQLKREE
OrthoDB:EOG4KM2B8 EMBL:AB027915 RefSeq:NP_593520.1
ProteinModelPortal:Q9HDY4 STRING:Q9HDY4
EnsemblFungi:SPAPB1A10.06c.1 GeneID:2543371 KEGG:spo:SPAPB1A10.06c
NextBio:20804386 Uniprot:Q9HDY4
Length = 1183
Score = 304 (112.1 bits), Expect = 1.0e-25, P = 1.0e-25
Identities = 78/205 (38%), Positives = 111/205 (54%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
G R ++ATN+AETSITI +I YVVDCGK K ++ K ++ + WIS ANA QR GR
Sbjct: 726 GHRMCIVATNVAETSITIPNIRYVVDCGKAKERVYNEKTSVQKFEVRWISKANADQRAGR 785
Query: 89 AGRVQEGVCYHLYSRAR-EQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNT 147
AGR G CY LYS A + +F + LPEI RT ++ +V L+ K + N
Sbjct: 786 AGRTGPGHCYRLYSSAVFDSSFPLHSLPEILRTPVESIV--LQMKNMNID--------NI 835
Query: 148 AFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKML 207
A P+ P P + ++ SLKLL + A+D + LT LG ++ PL P+ KML
Sbjct: 836 ANFPF---PTS----PGRSRLEKSLKLLSNLGAIDSEGVLTKLGEQMSLFPLSPRFSKML 888
Query: 208 LMASIFSCVDPVFTVAASLGFKDAF 232
++ C+ V + ++L F
Sbjct: 889 IIGQQHGCLPYVIALVSALSINQLF 913
>MGI|MGI:2445102 [details] [associations]
symbol:Dhx33 "DEAH (Asp-Glu-Ala-His) box polypeptide 33"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000182 "rDNA binding" evidence=ISO;IDA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=ISO;IDA] [GO:0005730 "nucleolus"
evidence=ISO;IDA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IPI]
[GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=ISO;IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:2445102
GO:GO:0005524 GO:GO:0005654 GO:GO:0005730 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 GO:GO:0000182
GO:GO:0045943 HOVERGEN:HBG039428 GeneTree:ENSGT00700000104241
CTD:56919 OMA:APDYFRR ChiTaRS:DHX33 EMBL:AK035177 EMBL:BC052172
IPI:IPI00410764 RefSeq:NP_848144.3 UniGene:Mm.35399
ProteinModelPortal:Q80VY9 SMR:Q80VY9 PhosphoSite:Q80VY9
PRIDE:Q80VY9 Ensembl:ENSMUST00000108527 GeneID:216877
KEGG:mmu:216877 InParanoid:Q80VY9 NextBio:375442 Bgee:Q80VY9
CleanEx:MM_DHX33 Genevestigator:Q80VY9
GermOnline:ENSMUSG00000040620 Uniprot:Q80VY9
Length = 698
Score = 299 (110.3 bits), Expect = 1.3e-25, P = 1.3e-25
Identities = 77/224 (34%), Positives = 112/224 (50%)
Query: 15 SGLKHLQNKSVFE---LGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIAT 71
+ L + Q VF+ G RK++++TNIAETSITI I YVVD G K ++ +
Sbjct: 320 ASLPYSQQLRVFQGAPKGYRKVIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEV 379
Query: 72 LKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDEVVRTLES 131
L + +S A QR GRAGR G+CY LY+ + F+ +PEIQR L V+ L +
Sbjct: 380 LAVQRVSKTQAWQRTGRAGREDSGICYRLYTEDEFEKFEKMTVPEIQRCNLASVILQLLA 439
Query: 132 KKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLG 191
K V F M + P + + A QL L L ++ DD LTP+G
Sbjct: 440 MKVPNVLT-FDFMSKPS-------PDHI----EAAIAQLDL--LGALEHKDDQLTLTPIG 485
Query: 192 YHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCP 235
+A PL+P+ K +L++S F C + + T+ + L Y P
Sbjct: 486 RKMAAFPLEPRFAKTILLSSKFHCTEEILTIVSLLSVDSVLYNP 529
>POMBASE|SPBC19C2.01 [details] [associations]
symbol:cdc28 "ATP-dependent RNA helicase Cdc28"
species:4896 "Schizosaccharomyces pombe" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=TAS] [GO:0005524 "ATP binding"
evidence=IC] [GO:0005681 "spliceosomal complex" evidence=IC]
[GO:0005682 "U5 snRNP" evidence=ISO] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IMP] [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPBC19C2.01
GO:GO:0005524 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0005682 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0046540 GO:GO:0004004 EMBL:U48733 PIR:T46568 PIR:T50372
RefSeq:NP_595686.2 ProteinModelPortal:Q10752 STRING:Q10752
EnsemblFungi:SPBC19C2.01.1 GeneID:2540707 KEGG:spo:SPBC19C2.01
HOGENOM:HOG000175261 KO:K12813 OMA:RIDDHRD OrthoDB:EOG4SBJ63
NextBio:20801829 GO:GO:0045292 Uniprot:Q10752
Length = 1055
Score = 302 (111.4 bits), Expect = 1.4e-25, P = 1.4e-25
Identities = 79/209 (37%), Positives = 114/209 (54%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
G RK+VLATNIAETSITID + +V+D G K + ++ + + +L S A+A QR GR
Sbjct: 685 GARKVVLATNIAETSITIDGVNFVIDSGFVKQNMYNPRTGMESLVSVPCSRASADQRAGR 744
Query: 89 AGRVQEGVCYHLYSRAREQTFQDYPL-PEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNT 147
AGRV G C+ LY+R D PEIQRT L +V L+S +L+
Sbjct: 745 AGRVGPGKCFRLYTRRTYNNELDMVTSPEIQRTNLTNIVLLLKSLGINN-------LLDF 797
Query: 148 AFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKML 207
F +D P P ++ SL+LL + AL++ LT LG +A+ P DP + K L
Sbjct: 798 DF----------MDAPPPETLMRSLELLYALGALNNRGELTKLGRQMAEFPTDPMLSKSL 847
Query: 208 LMASIFSCVDPVFTVAASLGFKDA-FYCP 235
+ +S + CV+ V ++ + LG + FY P
Sbjct: 848 IASSKYGCVEEVLSIVSMLGEASSLFYRP 876
Score = 126 (49.4 bits), Expect = 0.00015, P = 0.00015
Identities = 27/102 (26%), Positives = 55/102 (53%)
Query: 235 PMIGKMLLMASIFSCVDPVFTVAASLGFKDA-FYCPMNMEKDVDKQKNILAQGAKSDYVV 293
PM+ K L+ +S + CV+ V ++ + LG + FY P + + DK + Q D++
Sbjct: 841 PMLSKSLIASSKYGCVEEVLSIVSMLGEASSLFYRPKDKIMEADKARANFTQPG-GDHLT 899
Query: 294 LINAMQGWEQALEHNYAHDYCRENFXXXXXXXXXRDMKDQFS 335
L++ W + ++ ++++++ RENF RD++DQ +
Sbjct: 900 LLHI---WNEWVDTDFSYNWARENFLQYKSLCRARDVRDQLA 938
>SGD|S000001794 [details] [associations]
symbol:PRP16 "DEAH-box RNA helicase involved in second
catalytic step of splicing" species:4932 "Saccharomyces cerevisiae"
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0000350 "generation of catalytic
spliceosome for second transesterification step" evidence=IMP]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0071007 "U2-type catalytic step 2 spliceosome" evidence=IDA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IDA]
[GO:0000386 "second spliceosomal transesterification activity"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000001794 GO:GO:0005524 GO:GO:0003676
EMBL:BK006944 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0071007 EMBL:Z27116 GO:GO:0008186
RefSeq:NP_013012.3 GeneID:853961 KEGG:sce:YKR086W KO:K12815
GO:GO:0000350 GeneTree:ENSGT00700000104877 OrthoDB:EOG4GQTD2
EMBL:M31524 EMBL:Z28311 PIR:S38164 RefSeq:NP_013014.3
ProteinModelPortal:P15938 SMR:P15938 DIP:DIP-2824N IntAct:P15938
MINT:MINT-1699731 STRING:P15938 PaxDb:P15938 PeptideAtlas:P15938
EnsemblFungi:YKR086W GeneID:853963 KEGG:sce:YKR088C CYGD:YKR086w
OMA:IDCGYSK NextBio:975386 Genevestigator:P15938 GermOnline:YKR086W
Uniprot:P15938
Length = 1071
Score = 302 (111.4 bits), Expect = 1.5e-25, P = 1.5e-25
Identities = 82/209 (39%), Positives = 110/209 (52%)
Query: 31 RKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAG 90
RKI++ATNIAETS+TI I YV+DCG +K+ ++ K + +L IS ANA QR GRAG
Sbjct: 632 RKIIIATNIAETSLTIKGIRYVIDCGYSKLKVYNPKIGLDSLVITPISKANADQRSGRAG 691
Query: 91 RVQEGVCYHLYSRAREQTFQD--Y--PLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLN 146
R G Y LY+ E TF++ Y +PEIQRT L + L+S +F
Sbjct: 692 RTAPGTAYRLYT---EDTFKEDMYLQTIPEIQRTNLSNTLLLLKSLDVTDELSKF----- 743
Query: 147 TAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKM 206
P++ D P + SL L I A+D LTPLG +AK PL P + K+
Sbjct: 744 ----PFI-------DKPPLQTFLSSLYELWFIGAIDTSGQLTPLGLQMAKFPLQPSLSKI 792
Query: 207 LLMASIFSCVDPVFTVAASLGFKDAFYCP 235
LL+A C D + T+ + L FY P
Sbjct: 793 LLIAVRNGCSDEMLTIVSMLSVPQVFYRP 821
Score = 146 (56.5 bits), Expect = 9.3e-07, P = 9.3e-07
Identities = 50/192 (26%), Positives = 87/192 (45%)
Query: 163 PDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKMLLMASIFSCVDPVFTV 222
P+ LS LL L+ +LD + L+ + + K PL + + + I +D +
Sbjct: 717 PEIQRTNLSNTLL-LLKSLDVTDELSKFPF-IDKPPLQTFLSSLYELWFI-GAIDTSGQL 773
Query: 223 AASLGFKDAFYC--PMIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQK 280
LG + A + P + K+LL+A C D + T+ + L FY P +K+ D +
Sbjct: 774 TP-LGLQMAKFPLQPSLSKILLIAVRNGCSDEMLTIVSMLSVPQVFYRPKERQKEADIAR 832
Query: 281 NILAQGAKSDYVVLINAMQGWEQALEHNYAHDYCRENFXXXXXXXXXRDMKDQFSRTMHE 340
N AKSD++ L+N + W +N++ +C ++F RD++DQ +
Sbjct: 833 NKFFI-AKSDHLTLLNVFEQWRA---NNFSSHWCNKHFVQYKSLVRARDIRDQLLTILKS 888
Query: 341 MNF--ISS-RTW 349
ISS + W
Sbjct: 889 QKIPVISSGKDW 900
>SGD|S000003088 [details] [associations]
symbol:PRP43 "RNA helicase in the DEAH-box family"
species:4932 "Saccharomyces cerevisiae" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=IMP;IDA] [GO:0000390 "spliceosomal
complex disassembly" evidence=IGI;IDA] [GO:0030490 "maturation of
SSU-rRNA" evidence=IGI] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IDA] [GO:0071014 "post-mRNA
release spliceosomal complex" evidence=IMP] [GO:0006364 "rRNA
processing" evidence=IMP] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0042273 "ribosomal large subunit biogenesis" evidence=IMP]
[GO:0000462 "maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 SGD:S000003088
GO:GO:0005739 GO:GO:0005524 EMBL:BK006941 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0000463
GO:GO:0004004 HOGENOM:HOG000175261 GO:GO:0000390 GO:GO:0000466
GO:GO:0000462 KO:K12820 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
OrthoDB:EOG4S7NZ4 GO:GO:0071014 EMBL:U41851 EMBL:Z72642 PIR:S64130
RefSeq:NP_011395.1 PDB:2XAU PDB:3KX2 PDBsum:2XAU PDBsum:3KX2
ProteinModelPortal:P53131 SMR:P53131 DIP:DIP-5152N IntAct:P53131
MINT:MINT-497996 STRING:P53131 PaxDb:P53131 PeptideAtlas:P53131
PRIDE:P53131 EnsemblFungi:YGL120C GeneID:852757 KEGG:sce:YGL120C
CYGD:YGL120c EvolutionaryTrace:P53131 NextBio:972201
Genevestigator:P53131 GermOnline:YGL120C Uniprot:P53131
Length = 767
Score = 299 (110.3 bits), Expect = 1.7e-25, P = 1.7e-25
Identities = 76/206 (36%), Positives = 115/206 (55%)
Query: 31 RKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAG 90
RK+V++TNIAETS+TID IVYVVD G +K ++ + + +L IS A+A+QR GRAG
Sbjct: 370 RKVVISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASAQQRAGRAG 429
Query: 91 RVQEGVCYHLYSR-AREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNTAF 149
R + G C+ LY+ A ++ + PEI R+ L V LE KK + +++ F
Sbjct: 430 RTRPGKCFRLYTEEAFQKELIEQSYPEILRSNLSSTV--LELKKLGIDD-----LVHFDF 482
Query: 150 TPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKMLLM 209
+DPP P ++ +L+ L + LDD+ +LTPLG ++ PLDP + ML+
Sbjct: 483 ----------MDPPAPETMMRALEELNYLACLDDEGNLTPLGRLASQFPLDPMLAVMLIG 532
Query: 210 ASIFSCVDPVFTVAASLGFKDAFYCP 235
+ F C + T+ A L + F P
Sbjct: 533 SFEFQCSQEILTIVAMLSVPNVFIRP 558
Score = 130 (50.8 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 28/109 (25%), Positives = 49/109 (44%)
Query: 235 PMIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQGAKSDYVVL 294
PM+ ML+ + F C + T+ A L + F P +K D KNI A D++ L
Sbjct: 524 PMLAVMLIGSFEFQCSQEILTIVAMLSVPNVFIRPTKDKKRADDAKNIFAH-PDGDHITL 582
Query: 295 INAMQGWEQALEHNYA-HDYCRENFXXXXXXXXXRDMKDQFSRTMHEMN 342
+N ++ + Y H +CR+++ +++ Q R M+ N
Sbjct: 583 LNVYHAFKSDEAYEYGIHKWCRDHYLNYRSLSAADNIRSQLERLMNRYN 631
Score = 46 (21.3 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 9/18 (50%), Positives = 11/18 (61%)
Query: 112 YPLPEIQRTRLDEVVRTL 129
Y PE QR LD +RT+
Sbjct: 277 YYTPEFQRDYLDSAIRTV 294
>UNIPROTKB|E1BYA5 [details] [associations]
symbol:DHX33 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000182 "rDNA binding"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0033613 "activating transcription
factor binding" evidence=IEA] [GO:0045943 "positive regulation of
transcription from RNA polymerase I promoter" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005654 GO:GO:0005730 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AADN02025994
IPI:IPI00823199 Ensembl:ENSGALT00000002492 ArrayExpress:E1BYA5
Uniprot:E1BYA5
Length = 660
Score = 297 (109.6 bits), Expect = 1.9e-25, P = 1.9e-25
Identities = 76/228 (33%), Positives = 117/228 (51%)
Query: 15 SGLKHLQNKSVFEL---GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIAT 71
+ L + Q VF+ G RK++L+TNIAETSITI I YVVD G K ++ + +
Sbjct: 279 ASLPYSQQLRVFQAAPKGCRKVILSTNIAETSITISGIKYVVDTGMVKAKKYNPEIGLEV 338
Query: 72 LKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDEVVR-TLE 130
L + +S A A QR GRAGR G+CY LY+ + F +PEIQ + R L
Sbjct: 339 LAVQRVSKAQAWQRTGRAGREDSGICYRLYTEDEFEKFDKMTVPEIQ-----SLCRCNLA 393
Query: 131 SKKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEH---L 187
S ++++ R +L F + P P ++Q +++ L L+ A++ E L
Sbjct: 394 SVLLQLLALRIPNILTFDF----------MSKPSPDAIQAAIEQLDLLGAVEQKEDQLVL 443
Query: 188 TPLGYHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCP 235
TPLG +A PL+P+ K +L++ F C + + T+ + L Y P
Sbjct: 444 TPLGRKMAAFPLEPKFSKTILLSPKFHCTEEILTIVSLLSVDSVLYNP 491
>UNIPROTKB|F1P306 [details] [associations]
symbol:LOC100858239 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967
SMART:SM00316 GeneTree:ENSGT00700000104241 EMBL:AADN02070153
EMBL:AADN02070154 IPI:IPI00591627 Ensembl:ENSGALT00000001801
OMA:AMANTAM Uniprot:F1P306
Length = 1168
Score = 301 (111.0 bits), Expect = 2.1e-25, P = 2.1e-25
Identities = 80/208 (38%), Positives = 112/208 (53%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
G RK+V+ATNIAETS+TID I YVVD G K ++ K I L IS A AKQR GR
Sbjct: 779 GSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGR 838
Query: 89 AGRVQEGVCYHLYS-RAREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNT 147
AGR G CY LY+ RA +PEIQRT L V +L++ +L+
Sbjct: 839 AGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGIND-------LLSF 891
Query: 148 AFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKML 207
F +D P ++ +++ L + ALDD+ LT LG +A+ PL+P + KML
Sbjct: 892 DF----------MDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKML 941
Query: 208 LMASIFSCVDPVFTVAASLGFKDAFYCP 235
+M+ C + + T+ + L ++ FY P
Sbjct: 942 IMSVHLGCSEEMLTIVSMLSVQNVFYRP 969
Score = 125 (49.1 bits), Expect = 0.00021, P = 0.00021
Identities = 56/240 (23%), Positives = 109/240 (45%)
Query: 113 PLPEIQ-RTRLDEVVRTLESKKFKMVSRR-FK-VMLNTAFTPYVWVPKQVLDPPDPASVQ 169
P+ + Q + R RT K +++ + R ++ ML T VP+ + + AS
Sbjct: 826 PISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTN------VPE--IQRTNLASTV 877
Query: 170 LSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFK 229
LSLK + + D L D P P++ I M + ++ + D + LG +
Sbjct: 878 LSLKAMGINDLLSFDFMDAP--------PMETLITAMEQLYTLGALDDE--GLLTRLGRR 927
Query: 230 DAFYC--PMIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQGA 287
A + PM+ KML+M+ C + + T+ + L ++ FY P + + D++K Q
Sbjct: 928 MAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQ-T 986
Query: 288 KSDYVVLINAMQGWEQALEHNYAHDYCRENFXXXXXXXXXRDMKDQFSRTM--HEMNFIS 345
+ D++ L+ W+ + +++ +C ENF +D++ Q M H+++ +S
Sbjct: 987 EGDHLTLLAVYNSWKN---NKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVS 1043
>POMBASE|SPAC10F6.02c [details] [associations]
symbol:prp22 "ATP-dependent RNA helicase Prp22"
species:4896 "Schizosaccharomyces pombe" [GO:0000390 "spliceosomal
complex disassembly" evidence=ISS] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005681 "spliceosomal complex"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
PomBase:SPAC10F6.02c GO:GO:0005524 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0005681 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GO:GO:0000390 KO:K12818
OMA:NAWCYEN PIR:T37496 RefSeq:NP_593253.1 ProteinModelPortal:O42643
IntAct:O42643 STRING:O42643 PRIDE:O42643
EnsemblFungi:SPAC10F6.02c.1 GeneID:2542978 KEGG:spo:SPAC10F6.02c
OrthoDB:EOG45TGW9 NextBio:20804011 Uniprot:O42643
Length = 1168
Score = 301 (111.0 bits), Expect = 2.1e-25, P = 2.1e-25
Identities = 79/208 (37%), Positives = 111/208 (53%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
G RK+V+ATNIAETS+TID I YVVD G K S FD K + +L IS A A+QR GR
Sbjct: 777 GGRKVVIATNIAETSLTIDGIYYVVDPGFVKQSCFDPKLGMDSLIVTPISQAQARQRSGR 836
Query: 89 AGRVQEGVCYHLYSR-AREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNT 147
AGR G CY LY+ A P+PEIQR L + L++ +LN
Sbjct: 837 AGRTGPGKCYRLYTESAYRNEMLPSPIPEIQRQNLSHTILMLKAMGIND-------LLNF 889
Query: 148 AFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKML 207
F +DPP ++ +L+ L + ALDD+ LTPLG +A P++PQ+ K+L
Sbjct: 890 DF----------MDPPPAQTMIAALQNLYALSALDDEGLLTPLGRKMADFPMEPQLSKVL 939
Query: 208 LMASIFSCVDPVFTVAASLGFKDAFYCP 235
+ + C + + ++ A L + + P
Sbjct: 940 ITSVELGCSEEMLSIIAMLSVPNIWSRP 967
>UNIPROTKB|F5H658 [details] [associations]
symbol:DHX8 "ATP-dependent RNA helicase DHX8" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0005634
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
HGNC:HGNC:2749 EMBL:AC068675 EMBL:AC087650 IPI:IPI01010550
ProteinModelPortal:F5H658 SMR:F5H658 Ensembl:ENST00000540306
UCSC:uc010wig.2 ArrayExpress:F5H658 Bgee:F5H658 Uniprot:F5H658
Length = 1181
Score = 301 (111.0 bits), Expect = 2.2e-25, P = 2.2e-25
Identities = 80/208 (38%), Positives = 112/208 (53%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
G RK+V+ATNIAETS+TID I YVVD G K ++ K I L IS A AKQR GR
Sbjct: 831 GSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGR 890
Query: 89 AGRVQEGVCYHLYS-RAREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNT 147
AGR G CY LY+ RA +PEIQRT L V +L++ +L+
Sbjct: 891 AGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGIND-------LLSF 943
Query: 148 AFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKML 207
F +D P ++ +++ L + ALDD+ LT LG +A+ PL+P + KML
Sbjct: 944 DF----------MDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKML 993
Query: 208 LMASIFSCVDPVFTVAASLGFKDAFYCP 235
+M+ C + + T+ + L ++ FY P
Sbjct: 994 IMSVHLGCSEEMLTIVSMLSVQNVFYRP 1021
Score = 125 (49.1 bits), Expect = 0.00022, P = 0.00022
Identities = 56/240 (23%), Positives = 109/240 (45%)
Query: 113 PLPEIQ-RTRLDEVVRTLESKKFKMVSRR-FK-VMLNTAFTPYVWVPKQVLDPPDPASVQ 169
P+ + Q + R RT K +++ + R ++ ML T VP+ + + AS
Sbjct: 878 PISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTN------VPE--IQRTNLASTV 929
Query: 170 LSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFK 229
LSLK + + D L D P P++ I M + ++ + D + LG +
Sbjct: 930 LSLKAMGINDLLSFDFMDAP--------PMETLITAMEQLYTLGALDDE--GLLTRLGRR 979
Query: 230 DAFYC--PMIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQGA 287
A + PM+ KML+M+ C + + T+ + L ++ FY P + + D++K Q
Sbjct: 980 MAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQ-T 1038
Query: 288 KSDYVVLINAMQGWEQALEHNYAHDYCRENFXXXXXXXXXRDMKDQFSRTM--HEMNFIS 345
+ D++ L+ W+ + +++ +C ENF +D++ Q M H+++ +S
Sbjct: 1039 EGDHLTLLAVYNSWKN---NKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVS 1095
>RGD|1310723 [details] [associations]
symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide 8"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:1310723
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316
HOVERGEN:HBG039428 GeneTree:ENSGT00700000104241 KO:K12818 CTD:1659
OrthoDB:EOG4D26P2 UniGene:Rn.108087 EMBL:AY383690 IPI:IPI00370026
RefSeq:NP_001041309.1 SMR:Q6TXG4 Ensembl:ENSRNOT00000048140
GeneID:287727 KEGG:rno:287727 UCSC:RGD:1310723 NextBio:626887
Genevestigator:Q6TXG4 Uniprot:Q6TXG4
Length = 1210
Score = 301 (111.0 bits), Expect = 2.3e-25, P = 2.3e-25
Identities = 80/208 (38%), Positives = 112/208 (53%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
G RK+V+ATNIAETS+TID I YVVD G K ++ K I L IS A AKQR GR
Sbjct: 800 GSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGR 859
Query: 89 AGRVQEGVCYHLYS-RAREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNT 147
AGR G CY LY+ RA +PEIQRT L V +L++ +L+
Sbjct: 860 AGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGIND-------LLSF 912
Query: 148 AFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKML 207
F +D P ++ +++ L + ALDD+ LT LG +A+ PL+P + KML
Sbjct: 913 DF----------MDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKML 962
Query: 208 LMASIFSCVDPVFTVAASLGFKDAFYCP 235
+M+ C + + T+ + L ++ FY P
Sbjct: 963 IMSVHLGCSEEMLTIVSMLSVQNVFYRP 990
Score = 125 (49.1 bits), Expect = 0.00022, P = 0.00022
Identities = 56/240 (23%), Positives = 109/240 (45%)
Query: 113 PLPEIQ-RTRLDEVVRTLESKKFKMVSRR-FK-VMLNTAFTPYVWVPKQVLDPPDPASVQ 169
P+ + Q + R RT K +++ + R ++ ML T VP+ + + AS
Sbjct: 847 PISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTN------VPE--IQRTNLASTV 898
Query: 170 LSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFK 229
LSLK + + D L D P P++ I M + ++ + D + LG +
Sbjct: 899 LSLKAMGINDLLSFDFMDAP--------PMETLITAMEQLYTLGALDDE--GLLTRLGRR 948
Query: 230 DAFYC--PMIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQGA 287
A + PM+ KML+M+ C + + T+ + L ++ FY P + + D++K Q
Sbjct: 949 MAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQ-T 1007
Query: 288 KSDYVVLINAMQGWEQALEHNYAHDYCRENFXXXXXXXXXRDMKDQFSRTM--HEMNFIS 345
+ D++ L+ W+ + +++ +C ENF +D++ Q M H+++ +S
Sbjct: 1008 EGDHLTLLAVYNSWKN---NKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVS 1064
>ZFIN|ZDB-GENE-050809-39 [details] [associations]
symbol:dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide
8" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0051301 "cell division" evidence=IMP] [GO:0060215
"primitive hemopoiesis" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0070054 "mRNA splicing, via endonucleolytic
cleavage and ligation" evidence=IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-050809-39 GO:GO:0005524 GO:GO:0005634 GO:GO:0051301
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN CTD:1659
GO:GO:0060215 InterPro:IPR013957 Pfam:PF08648 EMBL:AL833789
IPI:IPI00498887 RefSeq:XP_002663993.1 UniGene:Dr.159472
ProteinModelPortal:E7F7E3 Ensembl:ENSDART00000066282 GeneID:606595
KEGG:dre:606595 NextBio:20892459 Bgee:E7F7E3 GO:GO:0070054
Uniprot:E7F7E3
Length = 1210
Score = 301 (111.0 bits), Expect = 2.3e-25, P = 2.3e-25
Identities = 80/208 (38%), Positives = 112/208 (53%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
G RK+V+ATNIAETS+TID I YVVD G K ++ K I L IS A AKQR GR
Sbjct: 821 GSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGR 880
Query: 89 AGRVQEGVCYHLYS-RAREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNT 147
AGR G CY LY+ RA +PEIQRT L V +L++ +L+
Sbjct: 881 AGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGIND-------LLSF 933
Query: 148 AFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKML 207
F +D P ++ +++ L + ALDD+ LT LG +A+ PL+P + KML
Sbjct: 934 DF----------MDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKML 983
Query: 208 LMASIFSCVDPVFTVAASLGFKDAFYCP 235
+M+ C + + T+ + L ++ FY P
Sbjct: 984 IMSVHLGCSEEMLTIVSMLSVQNVFYRP 1011
Score = 124 (48.7 bits), Expect = 0.00029, P = 0.00029
Identities = 56/240 (23%), Positives = 109/240 (45%)
Query: 113 PLPEIQ-RTRLDEVVRTLESKKFKMVSRR-FK-VMLNTAFTPYVWVPKQVLDPPDPASVQ 169
P+ + Q + R RT K +++ + R ++ ML T VP+ + + AS
Sbjct: 868 PISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTN------VPE--IQRTNLASTV 919
Query: 170 LSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFK 229
LSLK + + D L D P P++ I M + ++ + D + LG +
Sbjct: 920 LSLKAMGINDLLSFDFMDAP--------PMETLITAMEQLYTLGALDDE--GLLTRLGRR 969
Query: 230 DAFYC--PMIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQGA 287
A + PM+ KML+M+ C + + T+ + L ++ FY P + + D++K Q
Sbjct: 970 MAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQ-P 1028
Query: 288 KSDYVVLINAMQGWEQALEHNYAHDYCRENFXXXXXXXXXRDMKDQFSRTM--HEMNFIS 345
+ D++ L+ W+ + +++ +C ENF +D++ Q M H+++ +S
Sbjct: 1029 EGDHLTLLAVYNSWKN---NKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVS 1085
>UNIPROTKB|F1S1H3 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN CTD:1659 EMBL:FP102477 RefSeq:XP_003131427.2
Ensembl:ENSSSCT00000018917 GeneID:100517118 KEGG:ssc:100517118
Uniprot:F1S1H3
Length = 1212
Score = 301 (111.0 bits), Expect = 2.3e-25, P = 2.3e-25
Identities = 80/208 (38%), Positives = 112/208 (53%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
G RK+V+ATNIAETS+TID I YVVD G K ++ K I L IS A AKQR GR
Sbjct: 823 GSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGR 882
Query: 89 AGRVQEGVCYHLYS-RAREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNT 147
AGR G CY LY+ RA +PEIQRT L V +L++ +L+
Sbjct: 883 AGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGIND-------LLSF 935
Query: 148 AFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKML 207
F +D P ++ +++ L + ALDD+ LT LG +A+ PL+P + KML
Sbjct: 936 DF----------MDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKML 985
Query: 208 LMASIFSCVDPVFTVAASLGFKDAFYCP 235
+M+ C + + T+ + L ++ FY P
Sbjct: 986 IMSVHLGCSEEMLTIVSMLSVQNVFYRP 1013
Score = 125 (49.1 bits), Expect = 0.00022, P = 0.00022
Identities = 56/240 (23%), Positives = 109/240 (45%)
Query: 113 PLPEIQ-RTRLDEVVRTLESKKFKMVSRR-FK-VMLNTAFTPYVWVPKQVLDPPDPASVQ 169
P+ + Q + R RT K +++ + R ++ ML T VP+ + + AS
Sbjct: 870 PISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTN------VPE--IQRTNLASTV 921
Query: 170 LSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFK 229
LSLK + + D L D P P++ I M + ++ + D + LG +
Sbjct: 922 LSLKAMGINDLLSFDFMDAP--------PMETLITAMEQLYTLGALDDE--GLLTRLGRR 971
Query: 230 DAFYC--PMIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQGA 287
A + PM+ KML+M+ C + + T+ + L ++ FY P + + D++K Q
Sbjct: 972 MAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQ-T 1030
Query: 288 KSDYVVLINAMQGWEQALEHNYAHDYCRENFXXXXXXXXXRDMKDQFSRTM--HEMNFIS 345
+ D++ L+ W+ + +++ +C ENF +D++ Q M H+++ +S
Sbjct: 1031 EGDHLTLLAVYNSWKN---NKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVS 1087
>UNIPROTKB|E2R9R9 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN CTD:1659 EMBL:AAEX03006434 EMBL:AAEX03006433
RefSeq:XP_537627.2 ProteinModelPortal:E2R9R9
Ensembl:ENSCAFT00000023129 GeneID:480507 KEGG:cfa:480507
Uniprot:E2R9R9
Length = 1216
Score = 301 (111.0 bits), Expect = 2.3e-25, P = 2.3e-25
Identities = 80/208 (38%), Positives = 112/208 (53%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
G RK+V+ATNIAETS+TID I YVVD G K ++ K I L IS A AKQR GR
Sbjct: 827 GSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGR 886
Query: 89 AGRVQEGVCYHLYS-RAREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNT 147
AGR G CY LY+ RA +PEIQRT L V +L++ +L+
Sbjct: 887 AGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGIND-------LLSF 939
Query: 148 AFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKML 207
F +D P ++ +++ L + ALDD+ LT LG +A+ PL+P + KML
Sbjct: 940 DF----------MDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKML 989
Query: 208 LMASIFSCVDPVFTVAASLGFKDAFYCP 235
+M+ C + + T+ + L ++ FY P
Sbjct: 990 IMSVHLGCSEEMLTIVSMLSVQNVFYRP 1017
Score = 125 (49.1 bits), Expect = 0.00022, P = 0.00022
Identities = 56/240 (23%), Positives = 109/240 (45%)
Query: 113 PLPEIQ-RTRLDEVVRTLESKKFKMVSRR-FK-VMLNTAFTPYVWVPKQVLDPPDPASVQ 169
P+ + Q + R RT K +++ + R ++ ML T VP+ + + AS
Sbjct: 874 PISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTN------VPE--IQRTNLASTV 925
Query: 170 LSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFK 229
LSLK + + D L D P P++ I M + ++ + D + LG +
Sbjct: 926 LSLKAMGINDLLSFDFMDAP--------PMETLITAMEQLYTLGALDDE--GLLTRLGRR 975
Query: 230 DAFYC--PMIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQGA 287
A + PM+ KML+M+ C + + T+ + L ++ FY P + + D++K Q
Sbjct: 976 MAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQ-T 1034
Query: 288 KSDYVVLINAMQGWEQALEHNYAHDYCRENFXXXXXXXXXRDMKDQFSRTM--HEMNFIS 345
+ D++ L+ W+ + +++ +C ENF +D++ Q M H+++ +S
Sbjct: 1035 EGDHLTLLAVYNSWKN---NKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVS 1091
>UNIPROTKB|Q14562 [details] [associations]
symbol:DHX8 "ATP-dependent RNA helicase DHX8" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=TAS] [GO:0005681 "spliceosomal complex" evidence=TAS]
[GO:0008380 "RNA splicing" evidence=TAS] [GO:0006396 "RNA
processing" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 EMBL:D50487 GO:GO:0005524 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316
HOVERGEN:HBG039428 KO:K12818 OMA:NAWCYEN IPI:IPI00031508 PIR:A56236
RefSeq:NP_004932.1 UniGene:Hs.463105 PDB:2EQS PDB:3I4U PDBsum:2EQS
PDBsum:3I4U ProteinModelPortal:Q14562 SMR:Q14562 IntAct:Q14562
STRING:Q14562 PhosphoSite:Q14562 DMDM:3023637 PaxDb:Q14562
PeptideAtlas:Q14562 PRIDE:Q14562 Ensembl:ENST00000262415
GeneID:1659 KEGG:hsa:1659 UCSC:uc002idu.1 CTD:1659
GeneCards:GC17P041572 HGNC:HGNC:2749 HPA:HPA049285 MIM:600396
neXtProt:NX_Q14562 PharmGKB:PA27231 InParanoid:Q14562
OrthoDB:EOG4D26P2 PhylomeDB:Q14562 EvolutionaryTrace:Q14562
GenomeRNAi:1659 NextBio:6828 ArrayExpress:Q14562 Bgee:Q14562
CleanEx:HS_DHX8 Genevestigator:Q14562 GermOnline:ENSG00000067596
Uniprot:Q14562
Length = 1220
Score = 301 (111.0 bits), Expect = 2.3e-25, P = 2.3e-25
Identities = 80/208 (38%), Positives = 112/208 (53%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
G RK+V+ATNIAETS+TID I YVVD G K ++ K I L IS A AKQR GR
Sbjct: 831 GSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGR 890
Query: 89 AGRVQEGVCYHLYS-RAREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNT 147
AGR G CY LY+ RA +PEIQRT L V +L++ +L+
Sbjct: 891 AGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGIND-------LLSF 943
Query: 148 AFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKML 207
F +D P ++ +++ L + ALDD+ LT LG +A+ PL+P + KML
Sbjct: 944 DF----------MDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKML 993
Query: 208 LMASIFSCVDPVFTVAASLGFKDAFYCP 235
+M+ C + + T+ + L ++ FY P
Sbjct: 994 IMSVHLGCSEEMLTIVSMLSVQNVFYRP 1021
Score = 125 (49.1 bits), Expect = 0.00023, P = 0.00023
Identities = 56/240 (23%), Positives = 109/240 (45%)
Query: 113 PLPEIQ-RTRLDEVVRTLESKKFKMVSRR-FK-VMLNTAFTPYVWVPKQVLDPPDPASVQ 169
P+ + Q + R RT K +++ + R ++ ML T VP+ + + AS
Sbjct: 878 PISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTN------VPE--IQRTNLASTV 929
Query: 170 LSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFK 229
LSLK + + D L D P P++ I M + ++ + D + LG +
Sbjct: 930 LSLKAMGINDLLSFDFMDAP--------PMETLITAMEQLYTLGALDDE--GLLTRLGRR 979
Query: 230 DAFYC--PMIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQGA 287
A + PM+ KML+M+ C + + T+ + L ++ FY P + + D++K Q
Sbjct: 980 MAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQ-T 1038
Query: 288 KSDYVVLINAMQGWEQALEHNYAHDYCRENFXXXXXXXXXRDMKDQFSRTM--HEMNFIS 345
+ D++ L+ W+ + +++ +C ENF +D++ Q M H+++ +S
Sbjct: 1039 EGDHLTLLAVYNSWKN---NKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVS 1095
>UNIPROTKB|F1MEM4 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
OMA:NAWCYEN EMBL:DAAA02049231 EMBL:DAAA02049230 IPI:IPI00695401
Ensembl:ENSBTAT00000010976 Uniprot:F1MEM4
Length = 1230
Score = 301 (111.0 bits), Expect = 2.3e-25, P = 2.3e-25
Identities = 80/208 (38%), Positives = 112/208 (53%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
G RK+V+ATNIAETS+TID I YVVD G K ++ K I L IS A AKQR GR
Sbjct: 841 GSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGR 900
Query: 89 AGRVQEGVCYHLYS-RAREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNT 147
AGR G CY LY+ RA +PEIQRT L V +L++ +L+
Sbjct: 901 AGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGIND-------LLSF 953
Query: 148 AFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKML 207
F +D P ++ +++ L + ALDD+ LT LG +A+ PL+P + KML
Sbjct: 954 DF----------MDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKML 1003
Query: 208 LMASIFSCVDPVFTVAASLGFKDAFYCP 235
+M+ C + + T+ + L ++ FY P
Sbjct: 1004 IMSVHLGCSEEMLTIVSMLSVQNVFYRP 1031
Score = 125 (49.1 bits), Expect = 0.00023, P = 0.00023
Identities = 56/240 (23%), Positives = 109/240 (45%)
Query: 113 PLPEIQ-RTRLDEVVRTLESKKFKMVSRR-FK-VMLNTAFTPYVWVPKQVLDPPDPASVQ 169
P+ + Q + R RT K +++ + R ++ ML T VP+ + + AS
Sbjct: 888 PISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTN------VPE--IQRTNLASTV 939
Query: 170 LSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFK 229
LSLK + + D L D P P++ I M + ++ + D + LG +
Sbjct: 940 LSLKAMGINDLLSFDFMDAP--------PMETLITAMEQLYTLGALDDE--GLLTRLGRR 989
Query: 230 DAFYC--PMIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQGA 287
A + PM+ KML+M+ C + + T+ + L ++ FY P + + D++K Q
Sbjct: 990 MAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQ-T 1048
Query: 288 KSDYVVLINAMQGWEQALEHNYAHDYCRENFXXXXXXXXXRDMKDQFSRTM--HEMNFIS 345
+ D++ L+ W+ + +++ +C ENF +D++ Q M H+++ +S
Sbjct: 1049 EGDHLTLLAVYNSWKN---NKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVS 1105
>UNIPROTKB|D4A805 [details] [associations]
symbol:Dhx8 "Protein Dhx8" species:10116 "Rattus
norvegicus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1310723 GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 EMBL:CH473948 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
OMA:NAWCYEN IPI:IPI00567810 UniGene:Rn.108087
Ensembl:ENSRNOT00000028198 Uniprot:D4A805
Length = 1242
Score = 301 (111.0 bits), Expect = 2.3e-25, P = 2.3e-25
Identities = 80/208 (38%), Positives = 112/208 (53%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
G RK+V+ATNIAETS+TID I YVVD G K ++ K I L IS A AKQR GR
Sbjct: 853 GSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGR 912
Query: 89 AGRVQEGVCYHLYS-RAREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNT 147
AGR G CY LY+ RA +PEIQRT L V +L++ +L+
Sbjct: 913 AGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGIND-------LLSF 965
Query: 148 AFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKML 207
F +D P ++ +++ L + ALDD+ LT LG +A+ PL+P + KML
Sbjct: 966 DF----------MDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKML 1015
Query: 208 LMASIFSCVDPVFTVAASLGFKDAFYCP 235
+M+ C + + T+ + L ++ FY P
Sbjct: 1016 IMSVHLGCSEEMLTIVSMLSVQNVFYRP 1043
Score = 125 (49.1 bits), Expect = 0.00023, P = 0.00023
Identities = 56/240 (23%), Positives = 109/240 (45%)
Query: 113 PLPEIQ-RTRLDEVVRTLESKKFKMVSRR-FK-VMLNTAFTPYVWVPKQVLDPPDPASVQ 169
P+ + Q + R RT K +++ + R ++ ML T VP+ + + AS
Sbjct: 900 PISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTN------VPE--IQRTNLASTV 951
Query: 170 LSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFK 229
LSLK + + D L D P P++ I M + ++ + D + LG +
Sbjct: 952 LSLKAMGINDLLSFDFMDAP--------PMETLITAMEQLYTLGALDDE--GLLTRLGRR 1001
Query: 230 DAFYC--PMIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQGA 287
A + PM+ KML+M+ C + + T+ + L ++ FY P + + D++K Q
Sbjct: 1002 MAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQ-T 1060
Query: 288 KSDYVVLINAMQGWEQALEHNYAHDYCRENFXXXXXXXXXRDMKDQFSRTM--HEMNFIS 345
+ D++ L+ W+ + +++ +C ENF +D++ Q M H+++ +S
Sbjct: 1061 EGDHLTLLAVYNSWKN---NKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVS 1117
>MGI|MGI:1306823 [details] [associations]
symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide 8"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
MGI:MGI:1306823 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AL590994 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 InterPro:IPR022967 SMART:SM00316 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN CTD:1659
OrthoDB:EOG4D26P2 EMBL:BC132445 EMBL:AL591436 IPI:IPI00461304
RefSeq:NP_659080.2 UniGene:Mm.28186 ProteinModelPortal:A2A4P0
SMR:A2A4P0 PaxDb:A2A4P0 PRIDE:A2A4P0 DNASU:217207
Ensembl:ENSMUST00000039152 GeneID:217207 KEGG:mmu:217207
UCSC:uc007lpr.1 InParanoid:A2A4P0 NextBio:375641 Bgee:A2A4P0
Genevestigator:A2A4P0 Uniprot:A2A4P0
Length = 1244
Score = 301 (111.0 bits), Expect = 2.3e-25, P = 2.3e-25
Identities = 80/208 (38%), Positives = 112/208 (53%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
G RK+V+ATNIAETS+TID I YVVD G K ++ K I L IS A AKQR GR
Sbjct: 855 GSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGR 914
Query: 89 AGRVQEGVCYHLYS-RAREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNT 147
AGR G CY LY+ RA +PEIQRT L V +L++ +L+
Sbjct: 915 AGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGIND-------LLSF 967
Query: 148 AFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKML 207
F +D P ++ +++ L + ALDD+ LT LG +A+ PL+P + KML
Sbjct: 968 DF----------MDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKML 1017
Query: 208 LMASIFSCVDPVFTVAASLGFKDAFYCP 235
+M+ C + + T+ + L ++ FY P
Sbjct: 1018 IMSVHLGCSEEMLTIVSMLSVQNVFYRP 1045
Score = 125 (49.1 bits), Expect = 0.00023, P = 0.00023
Identities = 56/240 (23%), Positives = 109/240 (45%)
Query: 113 PLPEIQ-RTRLDEVVRTLESKKFKMVSRR-FK-VMLNTAFTPYVWVPKQVLDPPDPASVQ 169
P+ + Q + R RT K +++ + R ++ ML T VP+ + + AS
Sbjct: 902 PISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTN------VPE--IQRTNLASTV 953
Query: 170 LSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFK 229
LSLK + + D L D P P++ I M + ++ + D + LG +
Sbjct: 954 LSLKAMGINDLLSFDFMDAP--------PMETLITAMEQLYTLGALDDE--GLLTRLGRR 1003
Query: 230 DAFYC--PMIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQGA 287
A + PM+ KML+M+ C + + T+ + L ++ FY P + + D++K Q
Sbjct: 1004 MAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQ-T 1062
Query: 288 KSDYVVLINAMQGWEQALEHNYAHDYCRENFXXXXXXXXXRDMKDQFSRTM--HEMNFIS 345
+ D++ L+ W+ + +++ +C ENF +D++ Q M H+++ +S
Sbjct: 1063 EGDHLTLLAVYNSWKN---NKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVS 1119
>ASPGD|ASPL0000059403 [details] [associations]
symbol:AN0133 species:162425 "Emericella nidulans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000390 "spliceosomal complex disassembly" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0071014 "post-mRNA release
spliceosomal complex" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:BN001308 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACD01000004 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820
OMA:TVLQIHA OrthoDB:EOG4S7NZ4 RefSeq:XP_657737.1 STRING:Q5BH47
EnsemblFungi:CADANIAT00002613 GeneID:2875910 KEGG:ani:AN0133.2
Uniprot:Q5BH47
Length = 769
Score = 297 (109.6 bits), Expect = 2.7e-25, P = 2.7e-25
Identities = 76/206 (36%), Positives = 113/206 (54%)
Query: 31 RKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAG 90
RK++++TNIAETS+TID IVYVVD G +K ++ + + +L IS A+A+QR GRAG
Sbjct: 378 RKVIVSTNIAETSLTIDGIVYVVDPGFSKQKIYNPRIRVESLLVSPISKASAQQRAGRAG 437
Query: 91 RVQEGVCYHLYSR-AREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNTAF 149
R + G C+ LY+ A ++ D PEI R+ L V LE KK +
Sbjct: 438 RTRPGKCFRLYTESAFKKELIDQTYPEILRSNLSSTV--LELKKLGIDDL---------- 485
Query: 150 TPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKMLLM 209
V ++DPP P ++ +L+ L + LDDD +LTPLG ++ PLDP + ML+
Sbjct: 486 -----VHFDLMDPPAPETLMRALEELNYLACLDDDGNLTPLGRLASEFPLDPALAVMLIS 540
Query: 210 ASIFSCVDPVFTVAASLGFKDAFYCP 235
+ F C + + ++ A L F P
Sbjct: 541 SPEFYCSNEILSITALLSVPQIFVRP 566
>UNIPROTKB|G4MTU4 [details] [associations]
symbol:MGG_11351 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp16" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:CM001232 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K12815 RefSeq:XP_003713740.1 EnsemblFungi:MGG_11351T0
GeneID:5051310 KEGG:mgr:MGG_11351 Uniprot:G4MTU4
Length = 999
Score = 297 (109.6 bits), Expect = 4.4e-25, P = 4.4e-25
Identities = 78/211 (36%), Positives = 117/211 (55%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
GVRK ++ATNIAETS+T+D I+YVVD G +K+ ++ K + TL+ IS ANA QR GR
Sbjct: 568 GVRKCIVATNIAETSLTVDGIMYVVDAGYSKLKVYNPKMGMDTLQITPISQANASQRSGR 627
Query: 89 AGRVQEGVCYHLYSRAREQTFQD--Y--PLPEIQRTRLDEVVRTLESKKFKMVSRRFKVM 144
AGR G + L++ E+ F+D Y +PEIQRT L + ++S K M
Sbjct: 628 AGRTGPGKAFRLFT---EKAFKDELYIQTIPEIQRTNLSNTILLIKSLGVKD-------M 677
Query: 145 LNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIG 204
L+ F +DPP ++ SL L + ALD+ +T LG + P+DP +
Sbjct: 678 LDFDF----------MDPPPQDTMTTSLFDLWALGALDNLGDMTDLGRKMNFFPMDPPLA 727
Query: 205 KMLLMASIFSCVDPVFTVAASLGFKDAFYCP 235
K+++MA + C + + T+ + L + FY P
Sbjct: 728 KLIIMAEEYGCTEEMITIVSMLSVPNVFYRP 758
>ASPGD|ASPL0000014477 [details] [associations]
symbol:AN4032 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 EMBL:BN001302
EMBL:AACD01000065 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12815 OMA:PSRSTWE OrthoDB:EOG4GQTD2
RefSeq:XP_661636.1 EnsemblFungi:CADANIAT00004650 GeneID:2873454
KEGG:ani:AN4032.2 Uniprot:Q5B5Z8
Length = 924
Score = 296 (109.3 bits), Expect = 5.0e-25, P = 5.0e-25
Identities = 80/220 (36%), Positives = 118/220 (53%)
Query: 21 QNKSVFEL---GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWI 77
Q +FE GVRK+++ATNIAETS+T+D I++VVD G +K+ ++ K + TL+ I
Sbjct: 442 QQAKIFERAAPGVRKVIVATNIAETSLTVDGIMFVVDSGYSKLKVYNPKMGMDTLQITPI 501
Query: 78 SLANAKQRRGRAGRVQEGVCYHLYSR-AREQTFQDYPLPEIQRTRLDEVVRTLESKKFKM 136
S ANA QR GRAGR G Y LY+ A + +PEIQRT L V L+S K
Sbjct: 502 SQANANQRSGRAGRTGPGKAYRLYTEVAYKNEMYLQTIPEIQRTSLSNTVLLLKSLGVKD 561
Query: 137 VSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAK 196
+L+ F +DPP ++ SL L + ALD+ LT LG +
Sbjct: 562 -------LLDFDF----------MDPPPQETISTSLFELWSLGALDNLGDLTHLGRQMTP 604
Query: 197 LPLDPQIGKMLLMASI-FSCVDPVFTVAASLGFKDAFYCP 235
P+DP + K+++ A+ + C + + T+ + L + FY P
Sbjct: 605 FPMDPPLAKLIITAAEQYGCSEEMLTIVSMLSVPNVFYRP 644
>UNIPROTKB|E2RQN1 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 EMBL:AAEX03013926
Ensembl:ENSCAFT00000014378 NextBio:20859776 Uniprot:E2RQN1
Length = 698
Score = 293 (108.2 bits), Expect = 5.9e-25, P = 5.9e-25
Identities = 82/227 (36%), Positives = 116/227 (51%)
Query: 15 SGLKHLQNKSVFEL---GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIAT 71
+GL + VFE VRK+++ATN+AETSITI IVYV+DCG K+ ++ + I
Sbjct: 309 AGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTTIEC 368
Query: 72 LKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYP---LPEIQRTRLDEVVRT 128
L +S A+A QR GRAGR + G CY LY+ E+ F P +PE+QR+ L V+
Sbjct: 369 LVVAPVSQASANQRAGRAGRSRSGKCYRLYT---EEAFDKLPQCTVPEMQRSNLAPVILQ 425
Query: 129 LESKKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLT 188
L++ V R F M +P PP + VQ L L D
Sbjct: 426 LKALGIDNVLR-FHFM-----SP----------PPAQSMVQALELLYALGGLDKDCRLTE 469
Query: 189 PLGYHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCP 235
PLG +A+ PL+P KMLL + F C + ++AA + ++ F P
Sbjct: 470 PLGMRVAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNIFVVP 516
>UNIPROTKB|E2RQN7 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:AAEX03013926
Ensembl:ENSCAFT00000014371 Uniprot:E2RQN7
Length = 702
Score = 293 (108.2 bits), Expect = 6.0e-25, P = 6.0e-25
Identities = 82/227 (36%), Positives = 116/227 (51%)
Query: 15 SGLKHLQNKSVFEL---GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIAT 71
+GL + VFE VRK+++ATN+AETSITI IVYV+DCG K+ ++ + I
Sbjct: 317 AGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTTIEC 376
Query: 72 LKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYP---LPEIQRTRLDEVVRT 128
L +S A+A QR GRAGR + G CY LY+ E+ F P +PE+QR+ L V+
Sbjct: 377 LVVAPVSQASANQRAGRAGRSRSGKCYRLYT---EEAFDKLPQCTVPEMQRSNLAPVILQ 433
Query: 129 LESKKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLT 188
L++ V R F M +P PP + VQ L L D
Sbjct: 434 LKALGIDNVLR-FHFM-----SP----------PPAQSMVQALELLYALGGLDKDCRLTE 477
Query: 189 PLGYHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCP 235
PLG +A+ PL+P KMLL + F C + ++AA + ++ F P
Sbjct: 478 PLGMRVAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNIFVVP 524
>POMBASE|SPBC16H5.10c [details] [associations]
symbol:prp43 "ATP-dependent RNA helicase Prp43
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000390
"spliceosomal complex disassembly" evidence=ISO] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISO;ISS] [GO:0005524
"ATP binding" evidence=ISM] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005681 "spliceosomal complex" evidence=ISO] [GO:0006364 "rRNA
processing" evidence=ISS] [GO:0030686 "90S preribosome"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 PomBase:SPBC16H5.10c GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0005681 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 GO:GO:0000390 KO:K12820 OMA:TVLQIHA
EMBL:AB027819 PIR:T39615 RefSeq:NP_595937.1
ProteinModelPortal:O42945 IntAct:O42945 STRING:O42945
EnsemblFungi:SPBC16H5.10c.1 GeneID:2540057 KEGG:spo:SPBC16H5.10c
OrthoDB:EOG4S7NZ4 NextBio:20801194 Uniprot:O42945
Length = 735
Score = 293 (108.2 bits), Expect = 6.7e-25, P = 6.7e-25
Identities = 77/212 (36%), Positives = 114/212 (53%)
Query: 31 RKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAG 90
RK+V++TNIAETS+TID IVYVVD G +K ++ + + +L IS A+A+QR GRAG
Sbjct: 352 RKVVISTNIAETSLTIDGIVYVVDPGFSKQKIYNPRIRVESLLVSPISKASAQQRAGRAG 411
Query: 91 RVQEGVCYHLYSR-AREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNTAF 149
R + G C+ LY+ A + + PEI R+ L V LE KK +
Sbjct: 412 RTRPGKCFRLYTEEAFRKELIEQTYPEILRSNLSSTV--LELKKLGIDDL---------- 459
Query: 150 TPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKMLLM 209
V +DPP P ++ +L+ L ++ LDD+ LTPLG ++ PLDP + ML+
Sbjct: 460 -----VHFDYMDPPAPETMMRALEELNYLNCLDDNGDLTPLGRKASEFPLDPNLAVMLIR 514
Query: 210 ASIFSCVDPVFTVAASLGFKDAFYCPMIGKML 241
+ F C + V ++ A L + F P + L
Sbjct: 515 SPEFYCSNEVLSLTALLSVPNVFVRPNSARKL 546
>ASPGD|ASPL0000006947 [details] [associations]
symbol:AN5827 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:BN001301 EMBL:AACD01000100 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K12813
OMA:RIDDHRD OrthoDB:EOG4SBJ63 RefSeq:XP_663431.1
ProteinModelPortal:Q5B0V3 EnsemblFungi:CADANIAT00007219
GeneID:2871194 KEGG:ani:AN5827.2 Uniprot:Q5B0V3
Length = 1128
Score = 296 (109.3 bits), Expect = 6.9e-25, P = 6.9e-25
Identities = 78/207 (37%), Positives = 112/207 (54%)
Query: 31 RKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAG 90
RK+VLATNIAETS+TID IVYV+D G K + F+ + + +L S A+A QR GRAG
Sbjct: 750 RKVVLATNIAETSLTIDGIVYVIDPGFVKENVFNPRTGMESLVVTPCSRASANQRAGRAG 809
Query: 91 RVQEGVCYHLYSR-AREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNTAF 149
RV G C+ LY++ A ++ PEIQRT L V+ L+S +L F
Sbjct: 810 RVGPGKCFRLYTKWAYYNELEESTTPEIQRTNLSSVILMLKSLGIDQ-------LLEFDF 862
Query: 150 TPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKMLLM 209
+DPP ++ +L+ L + AL+D LT +G +A+ P DP + K +L
Sbjct: 863 ----------MDPPPAETIIRALEQLYALGALNDRGELTKIGRQMAEFPTDPMLAKAILA 912
Query: 210 ASIFSCVDPVFTVAASLGFKDA-FYCP 235
A CV+ V ++ + LG A F+ P
Sbjct: 913 ADKHGCVEEVLSIVSMLGEASALFFRP 939
Score = 126 (49.4 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 27/103 (26%), Positives = 52/103 (50%)
Query: 235 PMIGKMLLMASIFSCVDPVFTVAASLGFKDA-FYCPMNMEKDVDKQKNILAQGAKSDYVV 293
PM+ K +L A CV+ V ++ + LG A F+ P + + D +N D++
Sbjct: 904 PMLAKAILAADKHGCVEEVLSIVSMLGEASALFFRPKDKKIHADSARNRFTVKDGGDHLT 963
Query: 294 LINAMQGWEQALEHNYAHDYCRENFXXXXXXXXXRDMKDQFSR 336
L+N W Q ++ ++++ + +ENF RD++DQ ++
Sbjct: 964 LLNI---WNQWVDSDFSYVWAKENFLQQRSLTRARDVRDQLAK 1003
Score = 43 (20.2 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 24/81 (29%), Positives = 38/81 (46%)
Query: 14 SSGLKHLQNKSVFELGVRKIVLAT-NIAETSITIDD-IVYVVDCGKTKMSNFDVKDNIAT 71
S L L N S + V +LAT A++S ++ D I +D G ++S+F +
Sbjct: 8 SDSLLRLANAS--DPTVVDFILATATSAKSSSSLQDKIAPFLDAGAEEVSSFCSELYKRV 65
Query: 72 LKPEWISLANAKQRRG-RAGR 91
K E ++ NA G R G+
Sbjct: 66 GKSETSAITNAGTGSGNRDGK 86
>UNIPROTKB|F1PRA1 [details] [associations]
symbol:DHX33 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045943 "positive regulation of transcription
from RNA polymerase I promoter" evidence=IEA] [GO:0033613
"activating transcription factor binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0000182 "rDNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005654 GO:GO:0005730
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AAEX03003580
Ensembl:ENSCAFT00000024626 Uniprot:F1PRA1
Length = 616
Score = 291 (107.5 bits), Expect = 7.1e-25, P = 7.1e-25
Identities = 75/224 (33%), Positives = 110/224 (49%)
Query: 15 SGLKHLQNKSVFE---LGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIAT 71
+ L + Q VF+ G RK+++ATNIAETSITI I YVVD G K ++ +
Sbjct: 238 ASLPYAQQLRVFQGAPKGCRKVIIATNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEV 297
Query: 72 LKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDEVVRTLES 131
L + +S A QR GRAGR G+CY LY+ + F+ +PEIQR L V+ L +
Sbjct: 298 LAVQRVSKTQAWQRAGRAGREDSGICYRLYTENEFEKFEKMTVPEIQRCNLASVLLQLLA 357
Query: 132 KKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLG 191
K V + ++ K D A QL L L ++ D+ LTP+G
Sbjct: 358 MKVPNV------------LTFDFMSKPSPDHMQAAVAQLDL--LGALERKDNQLTLTPIG 403
Query: 192 YHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCP 235
+A PL+P+ K +L++ F C + + T+ + L Y P
Sbjct: 404 RKMAAFPLEPKFAKTILLSPKFHCTEEILTIVSLLSVDSVLYNP 447
>UNIPROTKB|G4NGS5 [details] [associations]
symbol:MGG_04040 "DEAH box polypeptide 37" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
EMBL:CM001236 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K14780
RefSeq:XP_003719802.1 ProteinModelPortal:G4NGS5
EnsemblFungi:MGG_04040T0 GeneID:2677154 KEGG:mgr:MGG_04040
Uniprot:G4NGS5
Length = 1185
Score = 296 (109.3 bits), Expect = 7.4e-25, P = 7.4e-25
Identities = 75/205 (36%), Positives = 112/205 (54%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
G R +VLATN+AETS+TI I YV D G++K +D + + + WIS A+A QR GR
Sbjct: 699 GSRLVVLATNVAETSLTIPGIRYVFDSGRSKERKYDQLTGVQSFEVGWISKASANQREGR 758
Query: 89 AGRVQEGVCYHLYSRA-REQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNT 147
AGR G C+ LYS A E+ ++ LPE+ RT L+ VV L+S + V +N
Sbjct: 759 AGRTGPGHCWRLYSSAVYERDLDEFALPELLRTSLEGVVLQLKSMNLQHV-------VNF 811
Query: 148 AFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKML 207
F P PP+ S+ S KLL+ I A+ ++ +T +GY ++ PL P+ ++L
Sbjct: 812 PF------PT----PPERDSLVKSEKLLKYISAVSEEGRVTQVGYTMSIFPLSPRFSRIL 861
Query: 208 LMASIFSCVDPVFTVAASLGFKDAF 232
L+ C+ T+ A+L + F
Sbjct: 862 LLGHQHDCLHYTVTLVAALSAAEIF 886
>TAIR|locus:2088847 [details] [associations]
symbol:AT3G26560 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA;ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0000226 "microtubule cytoskeleton
organization" evidence=RCA] [GO:0000911 "cytokinesis by cell plate
formation" evidence=RCA] [GO:0006486 "protein glycosylation"
evidence=RCA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005829 GO:GO:0005739 GO:GO:0009506 GO:GO:0005524
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0008380
GO:GO:0006397 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 EMBL:X98130
EMBL:X97970 EMBL:AB028611 IPI:IPI00530246 RefSeq:NP_189288.1
UniGene:At.46918 ProteinModelPortal:Q38953 SMR:Q38953 STRING:Q38953
PaxDb:Q38953 PRIDE:Q38953 EnsemblPlants:AT3G26560.1 GeneID:822264
KEGG:ath:AT3G26560 GeneFarm:1800 TAIR:At3g26560 InParanoid:Q38953
KO:K12818 OMA:NAWCYEN PhylomeDB:Q38953 ProtClustDB:CLSN2684863
Genevestigator:Q38953 GermOnline:AT3G26560 Uniprot:Q38953
Length = 1168
Score = 295 (108.9 bits), Expect = 9.3e-25, P = 9.3e-25
Identities = 79/208 (37%), Positives = 112/208 (53%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
G RK+V+ATNIAE S+TID I YVVD G K + ++ K + +L IS A+AKQR GR
Sbjct: 781 GKRKVVVATNIAEASLTIDGIYYVVDPGFAKQNVYNPKQGLESLVITPISQASAKQRAGR 840
Query: 89 AGRVQEGVCYHLYSR-AREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNT 147
AGR G CY LY+ A +PEIQR L + TL K + +L+
Sbjct: 841 AGRTGPGKCYRLYTESAYRNEMPPTSIPEIQRINLG--MTTLTMKAMGIND-----LLSF 893
Query: 148 AFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKML 207
F +DPP P ++ +++ L + ALD++ LT LG +A+ PL+P + KML
Sbjct: 894 DF----------MDPPQPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLEPPLSKML 943
Query: 208 LMASIFSCVDPVFTVAASLGFKDAFYCP 235
L + C D + T+ A + + FY P
Sbjct: 944 LASVDLGCSDEILTMIAMIQTGNIFYRP 971
>UNIPROTKB|G4NFJ0 [details] [associations]
symbol:MGG_08807 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp22" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:CM001236 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 KO:K12818 RefSeq:XP_003719164.1
ProteinModelPortal:G4NFJ0 EnsemblFungi:MGG_08807T0 GeneID:2678973
KEGG:mgr:MGG_08807 Uniprot:G4NFJ0
Length = 1207
Score = 295 (108.9 bits), Expect = 9.8e-25, P = 9.8e-25
Identities = 79/209 (37%), Positives = 112/209 (53%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
G RK+V+ATNIAETSITID I YVVD G K + +D K + +L IS A A QR GR
Sbjct: 808 GSRKVVIATNIAETSITIDHIYYVVDPGFVKQNAYDPKLGMDSLVVTPISQAQANQRAGR 867
Query: 89 AGRVQEGVCYHLYSRAREQTFQDYP--LPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLN 146
AGR G C+ LY+ A QT + P +PEIQR L + L++ +L+
Sbjct: 868 AGRTGPGKCFRLYTEAAYQT-EMLPTSIPEIQRQNLSNTILLLKAMGIND-------LLH 919
Query: 147 TAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKM 206
F +DPP ++ +L+ L + ALDD+ LT LG +A P++P + K+
Sbjct: 920 FDF----------MDPPPINTMLTALEELYALSALDDEGLLTRLGRKMADFPMEPSLSKV 969
Query: 207 LLMASIFSCVDPVFTVAASLGFKDAFYCP 235
L+ + C D + ++ A L + FY P
Sbjct: 970 LIASVEMRCSDEMLSIVAMLNLPNVFYRP 998
Score = 133 (51.9 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 27/109 (24%), Positives = 48/109 (44%)
Query: 235 PMIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQGAKSDYVVL 294
P + K+L+ + C D + ++ A L + FY P + D +K D++ L
Sbjct: 964 PSLSKVLIASVEMRCSDEMLSIVAMLNLPNVFYRPKEKQTQADAKKAKF-HDPNGDHLTL 1022
Query: 295 INAMQGWEQALEHNYAHDYCRENFXXXXXXXXXRDMKDQFSRTMHEMNF 343
+N W+Q+ Y+ +C ENF RD+++Q R M +
Sbjct: 1023 LNVYNAWKQS---RYSKPWCAENFIQFRALTRARDVRNQIERIMQRFKY 1068
Score = 39 (18.8 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 8/25 (32%), Positives = 13/25 (52%)
Query: 100 LYSRAREQTFQDYPLPEIQRTRLDE 124
LYS+ E + D L + + +DE
Sbjct: 724 LYSKDPESDYLDAALTTVMQIHIDE 748
>ZFIN|ZDB-GENE-040426-1144 [details] [associations]
symbol:dhx38 "DEAH (Asp-Glu-Ala-His) box
polypeptide 38" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-040426-1144 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
HOVERGEN:HBG039428 KO:K12815 CTD:9785 OrthoDB:EOG4Z62MS
EMBL:BC063744 IPI:IPI00493120 RefSeq:NP_957170.1 UniGene:Dr.38854
ProteinModelPortal:Q6P404 STRING:Q6P404 PRIDE:Q6P404 GeneID:393850
KEGG:dre:393850 NextBio:20814835 ArrayExpress:Q6P404 Bgee:Q6P404
Uniprot:Q6P404
Length = 1258
Score = 295 (108.9 bits), Expect = 1.0e-24, P = 1.0e-24
Identities = 78/208 (37%), Positives = 113/208 (54%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
GVRK ++ATNIAETS+T+D I++VVD G K+ F+ + + L+ IS ANA QR GR
Sbjct: 828 GVRKCIVATNIAETSLTVDGIMFVVDSGYCKLKVFNPRIGMDALQVYPISQANANQRAGR 887
Query: 89 AGRVQEGVCYHLYSR-AREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNT 147
AGR G CY LY++ A + +PEIQRT L VV L+S + ++L
Sbjct: 888 AGRTGPGQCYRLYTQSAFKNEMLTTTIPEIQRTNLANVVLLLKSLGVQ------DLLL-- 939
Query: 148 AFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKML 207
F +DPP ++ S+ L ++ ALD+ LTP G + + PLDP + KML
Sbjct: 940 -F--------HFMDPPPEDNMLNSMYQLWILGALDNTGALTPTGRLMVEFPLDPALSKML 990
Query: 208 LMASIFSCVDPVFTVAASLGFKDAFYCP 235
+++ SC + + + L FY P
Sbjct: 991 IVSCDMSCSADILIIVSMLSVPSIFYRP 1018
>RGD|1311165 [details] [associations]
symbol:Dhx35 "DEAH (Asp-Glu-Ala-His) box polypeptide 35"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA;ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 RGD:1311165 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104241 KO:K13117
OMA:NIFVVPP CTD:60625 EMBL:CH474005 IPI:IPI00764730
RefSeq:NP_001102071.1 UniGene:Rn.118078 Ensembl:ENSRNOT00000021435
GeneID:362260 KEGG:rno:362260 UCSC:RGD:1311165 NextBio:679233
Uniprot:D4AEG5
Length = 679
Score = 290 (107.1 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 82/227 (36%), Positives = 116/227 (51%)
Query: 15 SGLKHLQNKSVFEL---GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIAT 71
+GL + VFE VRK+++ATN+AETSITI IVYV+DCG K+ ++ + I
Sbjct: 317 AGLPSFEQMKVFERVSHSVRKVIVATNVAETSITISGIVYVIDCGFMKLRAYNPRTAIEC 376
Query: 72 LKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYP---LPEIQRTRLDEVVRT 128
L +S A+A QR GR GR + G CY LY+ E+ F+ P +PE+QR+ L VV
Sbjct: 377 LVVVPVSQASANQRAGRGGRNRSGKCYRLYT---EEAFEQLPQSTVPEMQRSNLAPVVLQ 433
Query: 129 LESKKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLT 188
L++ V R F M +P PP + VQ L L D
Sbjct: 434 LKALGIDSVLR-FHFM-----SP----------PPAQSMVQALELLYALGGLDKDCRLTE 477
Query: 189 PLGYHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCP 235
PLG +A+ PL+P KMLL + F C + ++AA + ++ F P
Sbjct: 478 PLGMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNVFVFP 524
>UNIPROTKB|D3ZZG1 [details] [associations]
symbol:Dhx35 "Protein Dhx35" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1311165 GO:GO:0005524 GO:GO:0003676 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 IPI:IPI00951610
Ensembl:ENSRNOT00000068625 OrthoDB:EOG4V9TQ5 ArrayExpress:D3ZZG1
Uniprot:D3ZZG1
Length = 703
Score = 290 (107.1 bits), Expect = 1.3e-24, P = 1.3e-24
Identities = 82/227 (36%), Positives = 116/227 (51%)
Query: 15 SGLKHLQNKSVFEL---GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIAT 71
+GL + VFE VRK+++ATN+AETSITI IVYV+DCG K+ ++ + I
Sbjct: 317 AGLPSFEQMKVFERVSHSVRKVIVATNVAETSITISGIVYVIDCGFMKLRAYNPRTAIEC 376
Query: 72 LKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYP---LPEIQRTRLDEVVRT 128
L +S A+A QR GR GR + G CY LY+ E+ F+ P +PE+QR+ L VV
Sbjct: 377 LVVVPVSQASANQRAGRGGRNRSGKCYRLYT---EEAFEQLPQSTVPEMQRSNLAPVVLQ 433
Query: 129 LESKKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLT 188
L++ V R F M +P PP + VQ L L D
Sbjct: 434 LKALGIDSVLR-FHFM-----SP----------PPAQSMVQALELLYALGGLDKDCRLTE 477
Query: 189 PLGYHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCP 235
PLG +A+ PL+P KMLL + F C + ++AA + ++ F P
Sbjct: 478 PLGMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNVFVFP 524
>UNIPROTKB|F1SDW0 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:CU442751
Ensembl:ENSSSCT00000008044 Uniprot:F1SDW0
Length = 719
Score = 290 (107.1 bits), Expect = 1.3e-24, P = 1.3e-24
Identities = 82/227 (36%), Positives = 115/227 (50%)
Query: 15 SGLKHLQNKSVFEL---GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIAT 71
+GL + VFE VRK+++ATN+AETSITI IVYV+DCG K+ ++ + I
Sbjct: 317 AGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIEC 376
Query: 72 LKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYP---LPEIQRTRLDEVVRT 128
L +S A+A QR GRAGR + G CY LY+ E F P +PE+QR+ L V+
Sbjct: 377 LVVVPVSQASANQRAGRAGRSRSGKCYRLYT---EDAFDQLPQSTVPEMQRSNLAPVILQ 433
Query: 129 LESKKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLT 188
L++ V R F M +P PP + VQ L L D
Sbjct: 434 LKALGIDNVLR-FHFM-----SP----------PPAQSMVQALELLYALGGLDKDCRLTE 477
Query: 189 PLGYHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCP 235
PLG +A+ PL+P KMLL + F C + ++AA + ++ F P
Sbjct: 478 PLGMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNIFVVP 524
>CGD|CAL0004556 [details] [associations]
symbol:orf19.2090 species:5476 "Candida albicans" [GO:0030686
"90S preribosome" evidence=IEA] [GO:0032040 "small-subunit
processome" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0000462 "maturation
of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 CGD:CAL0004556 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AACQ01000031
EMBL:AACQ01000030 KO:K14780 RefSeq:XP_719536.1 RefSeq:XP_719660.1
STRING:Q5ACX7 GeneID:3638741 GeneID:3638820 KEGG:cal:CaO19.2090
KEGG:cal:CaO19.9637 Uniprot:Q5ACX7
Length = 1263
Score = 294 (108.6 bits), Expect = 1.3e-24, P = 1.3e-24
Identities = 73/217 (33%), Positives = 120/217 (55%)
Query: 21 QNKSVFE---LGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWI 77
Q VFE G R ++ATN+AETS+TI I YVVDCG++K ++ ++ + + + +W+
Sbjct: 784 QQMKVFEDPPPGSRICIVATNVAETSLTIPGIRYVVDCGRSKERKYNQENGVQSFEVDWV 843
Query: 78 SLANAKQRRGRAGRVQEGVCYHLYSRAR-EQTFQDYPLPEIQRTRLDEVVRTLESKKFKM 136
S A+A QR GRAGR G CY LYS A E F + +PEI R + +V +++S
Sbjct: 844 SKASANQRAGRAGRTGPGHCYRLYSSAVFEDFFPQFSVPEILRMPFESIVLSMKSMGIDQ 903
Query: 137 VSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDE-HLTPLGYHLA 195
++ F P+ P PPD S++ + +LL ++ ALD ++ +T LG ++
Sbjct: 904 IAN---------F-PF---PT----PPDRFSLKKAEELLVILGALDKEQKQITDLGKKMS 946
Query: 196 KLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAF 232
PL P+ K+L++ + C+ + + ++L D F
Sbjct: 947 LFPLSPRFAKILIIGNQQECLSYIIAIVSALSVGDPF 983
>UNIPROTKB|E2RNZ8 [details] [associations]
symbol:TDRD9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 InterPro:IPR002999 GO:GO:0005524 GO:GO:0003676
GO:GO:0004386 Pfam:PF00567 PROSITE:PS50304
GeneTree:ENSGT00700000104393 EMBL:AAEX03006064 EMBL:AAEX03006065
EMBL:AAEX03006066 Ensembl:ENSCAFT00000029096 Uniprot:E2RNZ8
Length = 1115
Score = 293 (108.2 bits), Expect = 1.4e-24, P = 1.4e-24
Identities = 77/218 (35%), Positives = 119/218 (54%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
G RKI+L+TNIAE+S+T+ D+ YV+D T+ D N +L+ W S + QR+GR
Sbjct: 170 GYRKIILSTNIAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCNQRKGR 229
Query: 89 AGRVQEGVCYHLYSRAR-EQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNT 147
AGRV +G CY L R + + D+ +PE+ R L V L+ K M R +L T
Sbjct: 230 AGRVSKGYCYRLVHRDFWDSSIPDHVIPEMLRCPLGSTV--LKVKLLDMGEPR--ALLAT 285
Query: 148 AFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDAL-------DDDEH---LTPLGYHLAKL 197
A L PP + ++ ++ LL+ + AL D++ H LT LG LA+L
Sbjct: 286 A-----------LSPPSLSDIERTILLLKEVGALAVSGQREDENPHDGELTFLGRVLAQL 334
Query: 198 PLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCP 235
P++ Q+GK++++ +F C+D +AA+L K+ F P
Sbjct: 335 PVNQQLGKLIVLGHVFGCLDECLIIAAALSLKNFFAMP 372
>UNIPROTKB|J9P8U1 [details] [associations]
symbol:TDRD9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 InterPro:IPR002999 GO:GO:0005524 GO:GO:0003676
GO:GO:0004386 Pfam:PF00567 PROSITE:PS50304
GeneTree:ENSGT00700000104393 EMBL:AAEX03006064 EMBL:AAEX03006065
EMBL:AAEX03006066 Ensembl:ENSCAFT00000043378 Uniprot:J9P8U1
Length = 1120
Score = 293 (108.2 bits), Expect = 1.4e-24, P = 1.4e-24
Identities = 77/218 (35%), Positives = 119/218 (54%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
G RKI+L+TNIAE+S+T+ D+ YV+D T+ D N +L+ W S + QR+GR
Sbjct: 175 GYRKIILSTNIAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCNQRKGR 234
Query: 89 AGRVQEGVCYHLYSRAR-EQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNT 147
AGRV +G CY L R + + D+ +PE+ R L V L+ K M R +L T
Sbjct: 235 AGRVSKGYCYRLVHRDFWDSSIPDHVIPEMLRCPLGSTV--LKVKLLDMGEPR--ALLAT 290
Query: 148 AFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDAL-------DDDEH---LTPLGYHLAKL 197
A L PP + ++ ++ LL+ + AL D++ H LT LG LA+L
Sbjct: 291 A-----------LSPPSLSDIERTILLLKEVGALAVSGQREDENPHDGELTFLGRVLAQL 339
Query: 198 PLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCP 235
P++ Q+GK++++ +F C+D +AA+L K+ F P
Sbjct: 340 PVNQQLGKLIVLGHVFGCLDECLIIAAALSLKNFFAMP 377
>UNIPROTKB|E2RNZ9 [details] [associations]
symbol:TDRD9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 InterPro:IPR002999 GO:GO:0005524 GO:GO:0003676
GO:GO:0004386 Pfam:PF00567 PROSITE:PS50304
GeneTree:ENSGT00700000104393 OMA:INDWFTI EMBL:AAEX03006064
EMBL:AAEX03006065 EMBL:AAEX03006066 Ensembl:ENSCAFT00000029095
Uniprot:E2RNZ9
Length = 1127
Score = 293 (108.2 bits), Expect = 1.4e-24, P = 1.4e-24
Identities = 77/218 (35%), Positives = 119/218 (54%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
G RKI+L+TNIAE+S+T+ D+ YV+D T+ D N +L+ W S + QR+GR
Sbjct: 182 GYRKIILSTNIAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCNQRKGR 241
Query: 89 AGRVQEGVCYHLYSRAR-EQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNT 147
AGRV +G CY L R + + D+ +PE+ R L V L+ K M R +L T
Sbjct: 242 AGRVSKGYCYRLVHRDFWDSSIPDHVIPEMLRCPLGSTV--LKVKLLDMGEPR--ALLAT 297
Query: 148 AFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDAL-------DDDEH---LTPLGYHLAKL 197
A L PP + ++ ++ LL+ + AL D++ H LT LG LA+L
Sbjct: 298 A-----------LSPPSLSDIERTILLLKEVGALAVSGQREDENPHDGELTFLGRVLAQL 346
Query: 198 PLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCP 235
P++ Q+GK++++ +F C+D +AA+L K+ F P
Sbjct: 347 PVNQQLGKLIVLGHVFGCLDECLIIAAALSLKNFFAMP 384
>UNIPROTKB|F1MNA1 [details] [associations]
symbol:TDRD9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071547 "piP-body" evidence=IEA] [GO:0043046 "DNA
methylation involved in gamete generation" evidence=IEA]
[GO:0034587 "piRNA metabolic process" evidence=IEA] [GO:0009566
"fertilization" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0007140 "male meiosis" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
InterPro:IPR002999 GO:GO:0005524 GO:GO:0005634 GO:GO:0009566
GO:GO:0007283 GO:GO:0003676 GO:GO:0007140 Pfam:PF00567
SMART:SM00333 PROSITE:PS50304 GO:GO:0043046 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0034587
GeneTree:ENSGT00700000104393 GO:GO:0008026 GO:GO:0071547
OMA:INDWFTI EMBL:DAAA02053320 EMBL:DAAA02053321 EMBL:DAAA02053322
EMBL:DAAA02053323 IPI:IPI00699308 Ensembl:ENSBTAT00000027199
Uniprot:F1MNA1
Length = 1392
Score = 281 (104.0 bits), Expect = 1.5e-24, Sum P(2) = 1.5e-24
Identities = 76/221 (34%), Positives = 120/221 (54%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
G RKI+L+TNIAE+S+T+ D+ YV+D T+ D N +L+ W S + +QR+GR
Sbjct: 443 GYRKIILSTNIAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCEQRKGR 502
Query: 89 AGRVQEGVCYHLYSRAR-EQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNT 147
AGRV +G CY L + + + ++ +PE+ R L + L+ K M R +L T
Sbjct: 503 AGRVSKGYCYRLVHKDFWDNSIPNHVIPEMLRCPLGSTI--LKVKLLDMGEPR--ALLAT 558
Query: 148 AFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDAL-------DDDEH---LTPLGYHLAKL 197
A L PP + ++ ++ LL+ + AL DD+ H LT LG LA+L
Sbjct: 559 A-----------LSPPSLSDIERTILLLKEVGALAVSGRREDDNPHDGELTFLGRVLAQL 607
Query: 198 PLDPQIGKMLLMASIFSCVDP---VFTVAASLGFKDAFYCP 235
P+ Q+GK++++ +F C+D + +AASL K+ F P
Sbjct: 608 PVSQQLGKLIVLGHVFGCLDECLIIVLIAASLSLKNFFAMP 648
Score = 42 (19.8 bits), Expect = 1.5e-24, Sum P(2) = 1.5e-24
Identities = 14/54 (25%), Positives = 25/54 (46%)
Query: 233 YCPMIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQG 286
+ ++G L+ +FS V V V DA Y P ++ V + +++QG
Sbjct: 1047 FSSLVGGRTLLVKVFSMVHSVLHV-------DA-YLPSGLQDTVSVRGILISQG 1092
>ZFIN|ZDB-GENE-090313-193 [details] [associations]
symbol:tdrd9 "tudor domain containing 9"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0043046 "DNA methylation
involved in gamete generation" evidence=ISS] [GO:0071547 "piP-body"
evidence=ISS] [GO:0007140 "male meiosis" evidence=ISS] [GO:0009566
"fertilization" evidence=ISS] [GO:0007283 "spermatogenesis"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=IEA;ISS]
[GO:0034587 "piRNA metabolic process" evidence=ISS] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0007126 "meiosis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0031047 "gene silencing by RNA" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 InterPro:IPR002999 ZFIN:ZDB-GENE-090313-193
GO:GO:0005524 GO:GO:0003676 Pfam:PF00567 SMART:SM00333
PROSITE:PS50304 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 GO:GO:0008026 EMBL:BX072537
IPI:IPI00488074 Ensembl:ENSDART00000124958 Bgee:F1RA66
Uniprot:F1RA66
Length = 1344
Score = 294 (108.6 bits), Expect = 1.5e-24, P = 1.5e-24
Identities = 75/215 (34%), Positives = 117/215 (54%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
G RKI+L+TNIAE+S+T+ D+ YV+D + D + N L+ W S + QRRGR
Sbjct: 398 GYRKIILSTNIAESSVTVPDVKYVIDFCLVRQLACDKETNYRCLRITWASKTSCNQRRGR 457
Query: 89 AGRVQEGVCYHLYSRAR-EQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNT 147
AGRV +G CY L +R E ++ +PE+ R+ L + L+ K M R +L+T
Sbjct: 458 AGRVSKGFCYRLVTRHFWENEIPNFSIPEMLRSPLASTL--LKVKLLDMGDPRS--VLST 513
Query: 148 AFTPYVW--VPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGK 205
A TP + + + VL ++ + R D D LT LG LA+LP+D Q+GK
Sbjct: 514 ALTPPILGDIERTVLQLKQIGALSVQSNSQRQFDG-D----LTFLGRVLAQLPVDLQLGK 568
Query: 206 MLLMASIFSCVDPVFTVAASLGFKDAFYCPMIGKM 240
++++ +F C++ +AASL K F P + ++
Sbjct: 569 LIVLGHVFGCLEECLIIAASLSLKSFFAMPSLQQL 603
>UNIPROTKB|E1BDN4 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 KO:K13117 OMA:NIFVVPP CTD:60625
EMBL:DAAA02036576 EMBL:DAAA02036577 EMBL:DAAA02036578
IPI:IPI00707123 RefSeq:NP_001179272.1 UniGene:Bt.52291
Ensembl:ENSBTAT00000005281 GeneID:513148 KEGG:bta:513148
NextBio:20870723 Uniprot:E1BDN4
Length = 703
Score = 289 (106.8 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 81/227 (35%), Positives = 115/227 (50%)
Query: 15 SGLKHLQNKSVFEL---GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIAT 71
+GL + VFE VRK+++ATN+AETSITI IVYV+DCG K+ ++ + I
Sbjct: 317 AGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIEC 376
Query: 72 LKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYP---LPEIQRTRLDEVVRT 128
L +S A+A QR GR GR + G CY LY+ E+ F P +PE+QR+ L V+
Sbjct: 377 LVVVPVSQASANQRAGRGGRSRSGKCYRLYT---EEAFDQLPQSTVPEMQRSNLAPVILQ 433
Query: 129 LESKKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLT 188
L++ V R F M +P PP + VQ L L D
Sbjct: 434 LKALGIDNVLR-FHFM-----SP----------PPAQSMVQALELLYALGGLDKDCRLTE 477
Query: 189 PLGYHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCP 235
PLG +A+ PL+P KMLL + F C + ++AA + ++ F P
Sbjct: 478 PLGMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNVFVVP 524
>TAIR|locus:2007003 [details] [associations]
symbol:FAS4 "FASCIATED STEM 4" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
EMBL:CP002684 GO:GO:0005524 GO:GO:0003676 EMBL:AC051630
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000201240 KO:K14780
IPI:IPI00531863 PIR:E86457 RefSeq:NP_174605.1 UniGene:At.39951
ProteinModelPortal:Q9C813 SMR:Q9C813 STRING:Q9C813 PRIDE:Q9C813
EnsemblPlants:AT1G33390.1 GeneID:840232 KEGG:ath:AT1G33390
TAIR:At1g33390 InParanoid:Q9C813 OMA:EVQWISK PhylomeDB:Q9C813
ProtClustDB:CLSN2693169 Genevestigator:Q9C813 Uniprot:Q9C813
Length = 1237
Score = 293 (108.2 bits), Expect = 1.7e-24, P = 1.7e-24
Identities = 69/179 (38%), Positives = 105/179 (58%)
Query: 31 RKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAG 90
R +V+ATN+AETS+TI I YVVD G+ K+ N+D K + + + +WIS A+A QR GRAG
Sbjct: 673 RLVVVATNVAETSLTIPGIKYVVDTGRVKVKNYDSKTGMESYEVDWISQASASQRAGRAG 732
Query: 91 RVQEGVCYHLYSRAR-EQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNTAF 149
R G CY LYS A F++ LPEI + +D V+ ++S V F
Sbjct: 733 RTGPGHCYRLYSSAVFSNIFEESSLPEIMKVPVDGVILLMKSMNIPKVEN---------F 783
Query: 150 TPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKMLL 208
P+ P PP+P++++ + + L+ ++ALD + LTPLG ++ P+ P+ +MLL
Sbjct: 784 -PF---PT----PPEPSAIREAERCLKALEALDSNGGLTPLGKAMSHYPMSPRHSRMLL 834
>ZFIN|ZDB-GENE-080507-1 [details] [associations]
symbol:dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide
40" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-080507-1 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104421
EMBL:CR848791 EMBL:CU861501 IPI:IPI00507978
Ensembl:ENSDART00000101707 Uniprot:E7F7R7
Length = 734
Score = 289 (106.8 bits), Expect = 1.8e-24, P = 1.8e-24
Identities = 82/219 (37%), Positives = 114/219 (52%)
Query: 21 QNKSVFE---LGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWI 77
Q + +F+ GVRK V+ATNIA TS+TID I Y+VD G K N + + + L+ I
Sbjct: 291 QQRQIFQPAPKGVRKCVVATNIAATSLTIDGIRYIVDSGFVKQLNHNSRVGLDILEVVPI 350
Query: 78 SLANAKQRRGRAGRVQEGVCYHLYSRAREQT-FQDYPLPEIQRTRLDEVVRTLESKKFKM 136
S + A+QR GRAGR G C+ +YS+ T +Y +PEIQRT L V+ TL+
Sbjct: 351 SKSEAQQRAGRAGRTAAGKCFRIYSKDFWDTCMPEYTIPEIQRTSLTSVILTLKCLGVHD 410
Query: 137 VSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAK 196
V R F PY LD P+ + +LK L DA+D +T LG + +
Sbjct: 411 VIR---------F-PY-------LDCPEERFILTALKQLYQYDAIDRRGEVTKLGRLMVE 453
Query: 197 LPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCP 235
PL P + + LL A+ C D + VAA L ++ F P
Sbjct: 454 FPLPPNLTRALLKAAALGCEDIMLPVAAMLSVENIFIRP 492
>UNIPROTKB|I3L1L6 [details] [associations]
symbol:DHX33 "Putative ATP-dependent RNA helicase DHX33"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AC004148 HGNC:HGNC:16718 ChiTaRS:DHX33
Ensembl:ENST00000572490 Uniprot:I3L1L6
Length = 617
Score = 287 (106.1 bits), Expect = 1.9e-24, P = 1.9e-24
Identities = 76/224 (33%), Positives = 109/224 (48%)
Query: 15 SGLKHLQNKSVFE---LGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIAT 71
+ L + Q VF+ G RK++++TNIAETSITI I YVVD G K ++ +
Sbjct: 239 ASLPYAQQLRVFQGAPKGYRKVIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEV 298
Query: 72 LKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDEVVRTLES 131
L + +S A QR GRAGR G+CY LY+ + F +PEIQR L V+ L +
Sbjct: 299 LAVQRVSKTQAWQRTGRAGREDSGICYRLYTEDEFEKFDKMTVPEIQRCNLASVMLQLLA 358
Query: 132 KKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLG 191
K V F M + P + A QL L L ++ DD LTP+G
Sbjct: 359 MKVPNVLT-FDFMSKPS-------PDHI----QAAIAQLDL--LGALEHKDDQLTLTPMG 404
Query: 192 YHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCP 235
+A PL+P+ K +LM+ F C + + T+ + L + P
Sbjct: 405 RKMAAFPLEPKFAKTILMSPKFHCTEEILTIVSLLSVDSVLHNP 448
>CGD|CAL0000153 [details] [associations]
symbol:orf19.1687 species:5476 "Candida albicans" [GO:0030686
"90S preribosome" evidence=IEA] [GO:0071014 "post-mRNA release
spliceosomal complex" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000390 "spliceosomal complex disassembly" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0000153 GO:GO:0005524 GO:GO:0003676 EMBL:AACQ01000014
EMBL:AACQ01000013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12820 RefSeq:XP_721644.1
RefSeq:XP_721764.1 STRING:Q5AJA5 GeneID:3636669 GeneID:3636709
KEGG:cal:CaO19.1687 KEGG:cal:CaO19.9255 Uniprot:Q5AJA5
Length = 767
Score = 289 (106.8 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 73/206 (35%), Positives = 114/206 (55%)
Query: 31 RKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAG 90
RK++++TNIAETS+TID IVYVVD G +K ++ + + +L IS A+A+QR GRAG
Sbjct: 373 RKVIISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRVRVESLLVSPISKASAQQRAGRAG 432
Query: 91 RVQEGVCYHLYSR-AREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNTAF 149
R + G C+ LY+ A ++ + PEI R+ L V LE KK + +++ F
Sbjct: 433 RTRPGKCFRLYTEEAFKKELIEQSYPEILRSNLSSTV--LELKKLGIDD-----LVHFDF 485
Query: 150 TPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKMLLM 209
+DPP P ++ +L+ L + L D+ LT LG ++ PLDP + ML+
Sbjct: 486 ----------MDPPAPETMMRALEELNYLQCLSDEGDLTALGRLASQFPLDPMLAVMLIG 535
Query: 210 ASIFSCVDPVFTVAASLGFKDAFYCP 235
+ +SC + + T+ A L + F P
Sbjct: 536 SPAYSCSEEILTIVAMLSVPNVFVRP 561
Score = 138 (53.6 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 33/115 (28%), Positives = 58/115 (50%)
Query: 235 PMIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQGAKSDYVVL 294
PM+ ML+ + +SC + + T+ A L + F P + K D+ K AQ A D++ L
Sbjct: 527 PMLAVMLIGSPAYSCSEEILTIVAMLSVPNVFVRPASARKRADEAKLSFAQ-ADGDHLTL 585
Query: 295 INAMQGW--EQALEHNYAHDYCRENFXXXXXXXXXRDMKDQFSRTM--HEMNFIS 345
IN + + +A E H +CR+NF +++++Q R M +++ IS
Sbjct: 586 INVYEAFISPEASEIG-THKWCRDNFLSYRSLTSAKNVRNQLQRLMQKYDLQLIS 639
Score = 46 (21.3 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 105 REQTFQDYPLPEIQRTRLDEVVRTL 129
R + Y PE QR LD +RT+
Sbjct: 271 RTHPVEIYYTPEFQRDYLDAAIRTV 295
>UNIPROTKB|F1MWZ4 [details] [associations]
symbol:F1MWZ4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=IEA] [GO:0033613 "activating
transcription factor binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0000182
"rDNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005654 GO:GO:0005730
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:DAAA02048722
IPI:IPI00693412 Ensembl:ENSBTAT00000016932 Uniprot:F1MWZ4
Length = 714
Score = 288 (106.4 bits), Expect = 2.2e-24, P = 2.2e-24
Identities = 75/225 (33%), Positives = 110/225 (48%)
Query: 15 SGLKHLQNKSVFEL---GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIAT 71
+ L + Q VF+ G RK++++TNIAETSITI I YVVD G K ++ +
Sbjct: 336 ASLPYAQQLRVFQRAPKGYRKVIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEV 395
Query: 72 LKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDEVVRTLES 131
L + +S A QR GRAGR G+CY LY+ + F+ +PEIQR L V+ L +
Sbjct: 396 LAVQRVSKTQAWQRTGRAGREDSGICYRLYTEDEFEKFEKMTVPEIQRCNLASVMLQLLA 455
Query: 132 KKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLS-LKLLRLIDALDDDEHLTPL 190
K V F M + PD ++ L+LL ++ D LTP+
Sbjct: 456 MKIPNVLT-FDFMSKPS--------------PDHIQAAIAQLELLGALEHRDGQLTLTPM 500
Query: 191 GYHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCP 235
G +A PL+P+ K +L++ F C + + T+ A L Y P
Sbjct: 501 GRKMAAFPLEPKFAKTILLSPKFHCTEEILTIVALLSVDSILYNP 545
>UNIPROTKB|F5GXM6 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K13117 EMBL:AL023803
UniGene:Hs.444520 DNASU:60625 GeneID:60625 KEGG:hsa:60625 CTD:60625
HGNC:HGNC:15861 GenomeRNAi:60625 NextBio:65461 IPI:IPI00513682
RefSeq:NP_001177738.1 ProteinModelPortal:F5GXM6 SMR:F5GXM6
Ensembl:ENST00000373323 UCSC:uc010zwc.2 ArrayExpress:F5GXM6
Bgee:F5GXM6 Uniprot:F5GXM6
Length = 672
Score = 287 (106.1 bits), Expect = 2.4e-24, P = 2.4e-24
Identities = 81/227 (35%), Positives = 115/227 (50%)
Query: 15 SGLKHLQNKSVFEL---GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIAT 71
+GL + VFE VRK+++ATN+AETSITI IVYV+DCG K+ ++ + I
Sbjct: 286 AGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIEC 345
Query: 72 LKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYP---LPEIQRTRLDEVVRT 128
L +S A+A QR GR GR + G CY LY+ E+ F P +PE+QR+ L V+
Sbjct: 346 LVVVPVSQASANQRAGRGGRSRSGKCYRLYT---EEAFDKLPQSTVPEMQRSNLAPVILQ 402
Query: 129 LESKKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLT 188
L++ V R F M +P PP + VQ L L D
Sbjct: 403 LKALGIDNVLR-FHFM-----SP----------PPAQSMVQALELLYALGGLDKDCRLTE 446
Query: 189 PLGYHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCP 235
PLG +A+ PL+P KMLL + F C + ++AA + ++ F P
Sbjct: 447 PLGMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNIFVVP 493
>UNIPROTKB|Q5THR1 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
EMBL:AL023803 UniGene:Hs.444520 HGNC:HGNC:15861 IPI:IPI00642913
SMR:Q5THR1 Ensembl:ENST00000373325 Uniprot:Q5THR1
Length = 679
Score = 287 (106.1 bits), Expect = 2.5e-24, P = 2.5e-24
Identities = 81/227 (35%), Positives = 115/227 (50%)
Query: 15 SGLKHLQNKSVFEL---GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIAT 71
+GL + VFE VRK+++ATN+AETSITI IVYV+DCG K+ ++ + I
Sbjct: 317 AGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIEC 376
Query: 72 LKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYP---LPEIQRTRLDEVVRT 128
L +S A+A QR GR GR + G CY LY+ E+ F P +PE+QR+ L V+
Sbjct: 377 LVVVPVSQASANQRAGRGGRSRSGKCYRLYT---EEAFDKLPQSTVPEMQRSNLAPVILQ 433
Query: 129 LESKKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLT 188
L++ V R F M +P PP + VQ L L D
Sbjct: 434 LKALGIDNVLR-FHFM-----SP----------PPAQSMVQALELLYALGGLDKDCRLTE 477
Query: 189 PLGYHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCP 235
PLG +A+ PL+P KMLL + F C + ++AA + ++ F P
Sbjct: 478 PLGMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNIFVVP 524
>UNIPROTKB|Q9H5Z1 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CH471077 GO:GO:0003676 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HOVERGEN:HBG039428 KO:K13117 OMA:NIFVVPP
EMBL:AK026412 EMBL:AK025541 EMBL:AL023803 EMBL:BC132669
IPI:IPI00030288 RefSeq:NP_068750.2 UniGene:Hs.444520
ProteinModelPortal:Q9H5Z1 SMR:Q9H5Z1 IntAct:Q9H5Z1
PhosphoSite:Q9H5Z1 DMDM:20137971 PRIDE:Q9H5Z1 DNASU:60625
Ensembl:ENST00000252011 GeneID:60625 KEGG:hsa:60625 UCSC:uc002xjh.3
CTD:60625 GeneCards:GC20P037590 HGNC:HGNC:15861 neXtProt:NX_Q9H5Z1
PharmGKB:PA27222 InParanoid:Q9H5Z1 PhylomeDB:Q9H5Z1
GenomeRNAi:60625 NextBio:65461 ArrayExpress:Q9H5Z1 Bgee:Q9H5Z1
CleanEx:HS_DHX35 Genevestigator:Q9H5Z1 GermOnline:ENSG00000101452
Uniprot:Q9H5Z1
Length = 703
Score = 287 (106.1 bits), Expect = 2.7e-24, P = 2.7e-24
Identities = 81/227 (35%), Positives = 115/227 (50%)
Query: 15 SGLKHLQNKSVFEL---GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIAT 71
+GL + VFE VRK+++ATN+AETSITI IVYV+DCG K+ ++ + I
Sbjct: 317 AGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIEC 376
Query: 72 LKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYP---LPEIQRTRLDEVVRT 128
L +S A+A QR GR GR + G CY LY+ E+ F P +PE+QR+ L V+
Sbjct: 377 LVVVPVSQASANQRAGRGGRSRSGKCYRLYT---EEAFDKLPQSTVPEMQRSNLAPVILQ 433
Query: 129 LESKKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLT 188
L++ V R F M +P PP + VQ L L D
Sbjct: 434 LKALGIDNVLR-FHFM-----SP----------PPAQSMVQALELLYALGGLDKDCRLTE 477
Query: 189 PLGYHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCP 235
PLG +A+ PL+P KMLL + F C + ++AA + ++ F P
Sbjct: 478 PLGMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNIFVVP 524
>UNIPROTKB|Q9H6R0 [details] [associations]
symbol:DHX33 "Putative ATP-dependent RNA helicase DHX33"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IEA]
[GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=IDA] [GO:0000182
"rDNA binding" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:CH471108 GO:GO:0005654
GO:GO:0005730 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0000182 GO:GO:0045943 HOVERGEN:HBG039428
EMBL:AK025625 EMBL:AK026944 EMBL:AK295074 EMBL:AC004148
EMBL:BC030017 EMBL:CR936655 IPI:IPI00302860 IPI:IPI00655950
RefSeq:NP_001186628.1 RefSeq:NP_064547.2 UniGene:Hs.250456
ProteinModelPortal:Q9H6R0 SMR:Q9H6R0 IntAct:Q9H6R0
PhosphoSite:Q9H6R0 DMDM:296434478 PRIDE:Q9H6R0
Ensembl:ENST00000225296 GeneID:56919 KEGG:hsa:56919 UCSC:uc002gbz.3
CTD:56919 GeneCards:GC17M005360 HGNC:HGNC:16718 MIM:614405
neXtProt:NX_Q9H6R0 PharmGKB:PA27220 InParanoid:Q9H6R0 OMA:APDYFRR
OrthoDB:EOG46Q6S1 PhylomeDB:Q9H6R0 ChiTaRS:DHX33 GenomeRNAi:56919
NextBio:62420 ArrayExpress:Q9H6R0 Bgee:Q9H6R0 CleanEx:HS_DHX33
Genevestigator:Q9H6R0 GermOnline:ENSG00000005100 Uniprot:Q9H6R0
Length = 707
Score = 287 (106.1 bits), Expect = 2.7e-24, P = 2.7e-24
Identities = 76/224 (33%), Positives = 109/224 (48%)
Query: 15 SGLKHLQNKSVFE---LGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIAT 71
+ L + Q VF+ G RK++++TNIAETSITI I YVVD G K ++ +
Sbjct: 329 ASLPYAQQLRVFQGAPKGYRKVIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEV 388
Query: 72 LKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDEVVRTLES 131
L + +S A QR GRAGR G+CY LY+ + F +PEIQR L V+ L +
Sbjct: 389 LAVQRVSKTQAWQRTGRAGREDSGICYRLYTEDEFEKFDKMTVPEIQRCNLASVMLQLLA 448
Query: 132 KKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLG 191
K V F M + P + A QL L L ++ DD LTP+G
Sbjct: 449 MKVPNVLT-FDFMSKPS-------PDHI----QAAIAQLDL--LGALEHKDDQLTLTPMG 494
Query: 192 YHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCP 235
+A PL+P+ K +LM+ F C + + T+ + L + P
Sbjct: 495 RKMAAFPLEPKFAKTILMSPKFHCTEEILTIVSLLSVDSVLHNP 538
>ASPGD|ASPL0000070923 [details] [associations]
symbol:AN4721 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003723
EMBL:BN001303 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 EMBL:AACD01000080 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
OMA:NAWCYEN OrthoDB:EOG45TGW9 RefSeq:XP_662325.1
ProteinModelPortal:Q5B409 EnsemblFungi:CADANIAT00005708
GeneID:2872518 KEGG:ani:AN4721.2 Uniprot:Q5B409
Length = 1241
Score = 291 (107.5 bits), Expect = 2.7e-24, P = 2.7e-24
Identities = 76/209 (36%), Positives = 113/209 (54%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
G RK+V+ATNIAETSITID+I YV+D G K +D K + +L IS A AKQR GR
Sbjct: 843 GGRKVVIATNIAETSITIDNIYYVIDPGFVKQKAYDPKLGMDSLVVTPISQAQAKQRAGR 902
Query: 89 AGRVQEGVCYHLYSRAREQTFQDYP--LPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLN 146
AGR G C+ LY+ A Q+ + P +P+IQR L + L++ +L+
Sbjct: 903 AGRTGPGKCFRLYTEAAYQS-EMLPTTIPDIQRQNLSHTILMLKAMGIND-------LLH 954
Query: 147 TAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKM 206
F +DPP ++ +L+ L + ALDD+ LT LG +A P++P + K+
Sbjct: 955 FDF----------MDPPPTNTMLTALEELYALSALDDEGLLTRLGRKMADFPMEPALAKV 1004
Query: 207 LLMASIFSCVDPVFTVAASLGFKDAFYCP 235
L+ + C + + ++ A L + FY P
Sbjct: 1005 LIASVDMGCSEEMLSIVAMLSIQSVFYRP 1033
>FB|FBgn0032194 [details] [associations]
symbol:CG4901 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0000390 "spliceosomal complex disassembly" evidence=ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0004386
"helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014134 GO:GO:0022008 GO:GO:0006200 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AY113491
RefSeq:NP_609356.2 UniGene:Dm.10854 SMR:Q9VL25 MINT:MINT-898830
STRING:Q9VL25 EnsemblMetazoa:FBtr0079947 GeneID:34357
KEGG:dme:Dmel_CG4901 UCSC:CG4901-RA FlyBase:FBgn0032194
InParanoid:Q9VL25 OrthoDB:EOG4MW6N5 GenomeRNAi:34357 NextBio:788096
Uniprot:Q9VL25
Length = 694
Score = 286 (105.7 bits), Expect = 3.3e-24, P = 3.3e-24
Identities = 76/203 (37%), Positives = 105/203 (51%)
Query: 30 VRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRA 89
VRK++LATNIAETSITI I V+DCG K +F+ D + LK IS A A QR GRA
Sbjct: 340 VRKVILATNIAETSITIPGIRCVIDCGFVKEKSFNTVDGLDVLKSVRISKAQAWQRAGRA 399
Query: 90 GRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNTAF 149
GR +G CY Y++A +F D PEI RT +V L + L+
Sbjct: 400 GRDADGTCYRAYTKAEMDSFADATQPEILRTNPTSMVLQL-------------LALDIDC 446
Query: 150 TPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKMLLM 209
+ ++ + D S SL L I DD ++TPLG + + PLDP+ K+LL
Sbjct: 447 NNFDFLDPPLED--GLRSAYKSLDALGAIKT-GDDSYITPLGRQMVQYPLDPKYSKLLLT 503
Query: 210 ASIFSCVDPVFTVAASLGFKDAF 232
AS F C++ + ++ + L F
Sbjct: 504 ASSFGCMEEILSLVSVLSSDHVF 526
>UNIPROTKB|C9JR60 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
RefSeq:NP_001159773.1 UniGene:Hs.29403 GeneID:79665 KEGG:hsa:79665
CTD:79665 HGNC:HGNC:18018 ChiTaRS:DHX40 OrthoDB:EOG48PMJH
EMBL:AC091271 EMBL:AC004167 IPI:IPI00952676
ProteinModelPortal:C9JR60 STRING:C9JR60 Ensembl:ENST00000425628
ArrayExpress:C9JR60 Uniprot:C9JR60
Length = 702
Score = 285 (105.4 bits), Expect = 4.4e-24, P = 4.4e-24
Identities = 77/209 (36%), Positives = 110/209 (52%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
G+RK V++TNI+ TS+TID I YVVD G K N + + + L+ IS + A QR GR
Sbjct: 260 GIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGR 319
Query: 89 AGRVQEGVCYHLYSRAR-EQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNT 147
AGR G C+ +YS+ Q D+ +PEI+RT L VV TL+ V R
Sbjct: 320 AGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIR-------- 371
Query: 148 AFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKML 207
F PY LDPP+ + +LK L DA+D H+T LG + + PL P + +
Sbjct: 372 -F-PY-------LDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAV 422
Query: 208 LMASIFSCVDPVFTVAASLGFKDAFYCPM 236
+ A+ C D + +AA L ++ F P+
Sbjct: 423 IKAASLDCEDLLLPIAAMLSVENVFIRPV 451
>UNIPROTKB|E1BNQ2 [details] [associations]
symbol:DHX37 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 KO:K14780 CTD:57647 EMBL:DAAA02045204
IPI:IPI00698261 RefSeq:NP_001192890.1 UniGene:Bt.8113 PRIDE:E1BNQ2
Ensembl:ENSBTAT00000027206 GeneID:529207 KEGG:bta:529207
OMA:ANCRDAL NextBio:20874985 Uniprot:E1BNQ2
Length = 1155
Score = 274 (101.5 bits), Expect = 4.8e-24, Sum P(2) = 4.8e-24
Identities = 70/209 (33%), Positives = 110/209 (52%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
G R V+ATN+AETS+TI I YVVDCGK K ++D +++ + W+S A+A QR GR
Sbjct: 610 GTRLCVVATNVAETSLTIPGIKYVVDCGKVKKRHYDRVTGVSSFRVTWVSQASADQRAGR 669
Query: 89 AGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDEVVRTLESKKF-KMVSRRF----KV 143
AGR + G CY LYS A F+ YP PEI R +++++ +++ K+++ F V
Sbjct: 670 AGRTEPGHCYRLYSSAVFGDFEKYPPPEITRRPVEDLILQMKALNIEKVINFPFPTPPSV 729
Query: 144 MLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQI 203
A + + PP V+ L+ RL + T LG +A P+ P+
Sbjct: 730 EALIAAEELLIALGALQAPPKTERVK-QLQRSRLSCPI------TELGRTMATFPVAPRY 782
Query: 204 GKMLLMASIFSCVDPVFTVAASLGFKDAF 232
KML ++ C+ T+ A++ ++ F
Sbjct: 783 AKMLALSRQHGCLPYTITIVAAMTVRELF 811
Score = 42 (19.8 bits), Expect = 4.8e-24, Sum P(2) = 4.8e-24
Identities = 14/38 (36%), Positives = 19/38 (50%)
Query: 233 YCPMIGKMLL-MASIFSCVD-PVFTVAASLGFKDAFYC 268
YCP G+ML AS+F V P+ A + F + C
Sbjct: 1023 YCPEKGRMLCHRASVFYRVGWPL--PAVQVDFPEGLDC 1058
>UNIPROTKB|C9JEW8 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HGNC:HGNC:18018 ChiTaRS:DHX40 EMBL:AC091271
EMBL:AC004167 IPI:IPI00789290 ProteinModelPortal:C9JEW8 SMR:C9JEW8
STRING:C9JEW8 Ensembl:ENST00000451169 ArrayExpress:C9JEW8
Bgee:C9JEW8 Uniprot:C9JEW8
Length = 731
Score = 285 (105.4 bits), Expect = 4.8e-24, P = 4.8e-24
Identities = 77/209 (36%), Positives = 110/209 (52%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
G+RK V++TNI+ TS+TID I YVVD G K N + + + L+ IS + A QR GR
Sbjct: 289 GIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGR 348
Query: 89 AGRVQEGVCYHLYSRAR-EQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNT 147
AGR G C+ +YS+ Q D+ +PEI+RT L VV TL+ V R
Sbjct: 349 AGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIR-------- 400
Query: 148 AFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKML 207
F PY LDPP+ + +LK L DA+D H+T LG + + PL P + +
Sbjct: 401 -F-PY-------LDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAV 451
Query: 208 LMASIFSCVDPVFTVAASLGFKDAFYCPM 236
+ A+ C D + +AA L ++ F P+
Sbjct: 452 IKAASLDCEDLLLPIAAMLSVENVFIRPV 480
>RGD|1306942 [details] [associations]
symbol:Tdrd9 "tudor domain containing 9" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;ISS] [GO:0007140 "male meiosis" evidence=ISO;ISS]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=ISO;ISS] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0009566
"fertilization" evidence=ISO;ISS] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0031047 "gene silencing by RNA"
evidence=IEA] [GO:0034587 "piRNA metabolic process"
evidence=ISO;ISS] [GO:0043046 "DNA methylation involved in gamete
generation" evidence=ISO;ISS] [GO:0071547 "piP-body"
evidence=ISO;ISS] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 InterPro:IPR002999
RGD:1306942 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634 GO:GO:0030154
GO:GO:0009566 GO:GO:0007283 GO:GO:0003676 GO:GO:0031047
GO:GO:0007140 Pfam:PF00567 SMART:SM00333 PROSITE:PS50304
GO:GO:0043046 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0034587 eggNOG:COG1643 GeneTree:ENSGT00700000104393
GO:GO:0008026 GO:GO:0071547 CTD:122402 OrthoDB:EOG4F4S96
HOGENOM:HOG000047965 EMBL:AABR03050289 EMBL:AABR03048647
EMBL:AABR03049552 EMBL:AABR03049859 EMBL:AABR03050293
EMBL:AABR03051941 EMBL:BC104675 IPI:IPI00655293 IPI:IPI00895578
RefSeq:XP_001072421.2 UniGene:Rn.126122 STRING:Q3MHU3 PRIDE:Q3MHU3
Ensembl:ENSRNOT00000017118 GeneID:299343 KEGG:rno:299343
UCSC:RGD:1306942 NextBio:645254 Genevestigator:Q3MHU3
Uniprot:Q3MHU3
Length = 1384
Score = 289 (106.8 bits), Expect = 5.2e-24, P = 5.2e-24
Identities = 77/218 (35%), Positives = 117/218 (53%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
G RKI+L+TNIAE+S+T+ D+ YV+D T+ D N +L+ W S + QR+GR
Sbjct: 439 GYRKIILSTNIAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCDQRKGR 498
Query: 89 AGRVQEGVCYHLYSRAR-EQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNT 147
AGRV +G CY L R + D+ +PE+ R L V L+ K M R +L T
Sbjct: 499 AGRVSKGYCYRLIHRDFWDSAIPDHVVPEMLRCPLGSTV--LKVKLLDMGEPR--ALLAT 554
Query: 148 AFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDAL-------DDDEH---LTPLGYHLAKL 197
A L PP + ++ ++ LL+ + AL D++ H LT LG LA+L
Sbjct: 555 A-----------LSPPSLSDIERTILLLKEVGALAVSGQREDENPHDGELTFLGRVLAQL 603
Query: 198 PLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCP 235
P+ Q+GK++++ +F C+D +AA+L K+ F P
Sbjct: 604 PVSQQLGKLIVLGHVFGCLDECLIIAAALSLKNFFTMP 641
>UNIPROTKB|I3LA09 [details] [associations]
symbol:I3LA09 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] InterPro:IPR007502 Pfam:PF04408
SMART:SM00847 GO:GO:0005739 GO:GO:0004386
GeneTree:ENSGT00550000074257 EMBL:CU856640
Ensembl:ENSSSCT00000031298 Uniprot:I3LA09
Length = 183
Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
Identities = 70/172 (40%), Positives = 103/172 (59%)
Query: 69 IATLKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDEVVRT 128
+++L ++S A+A QR+GRAGRV++G C+ +Y+R R + F DY +PEI R L+E+
Sbjct: 1 MSSLVETFVSKASALQRQGRAGRVRDGFCFRMYTRERFEGFMDYSVPEILRVPLEELC-- 58
Query: 129 LESKKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDE-HL 187
L K + S P ++ K LDPP + ++ LLR I A + +E L
Sbjct: 59 LHIMKCNLGS------------PEDFLSK-ALDPPQLQVISNAMHLLRKIGACELNEPKL 105
Query: 188 TPLGYHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMIGK 239
TPLG HLA LP++ +IGKML+ +IF C+DPV T+AA + K F P IG+
Sbjct: 106 TPLGQHLAALPVNVKIGKMLIFGAIFGCLDPVATLAAVMTEKSPFTTP-IGR 156
Score = 124 (48.7 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 27/64 (42%), Positives = 39/64 (60%)
Query: 237 IGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQGAKSDYVVLIN 296
IGKML+ +IF C+DPV T+AA + K F P+ + + D K+ LA A SD++ + N
Sbjct: 121 IGKMLIFGAIFGCLDPVATLAAVMTEKSPFTTPIGRKDEADLAKSALAM-ADSDHLTIYN 179
Query: 297 AMQG 300
A G
Sbjct: 180 AYLG 183
>UNIPROTKB|Q08DS9 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
HOVERGEN:HBG039428 GeneTree:ENSGT00700000104421 CTD:79665
OMA:LYGSMPT EMBL:DAAA02048338 EMBL:BC123581 IPI:IPI00715479
RefSeq:NP_001070365.1 UniGene:Bt.63706 Ensembl:ENSBTAT00000023753
GeneID:533484 KEGG:bta:533484 InParanoid:Q08DS9 NextBio:20876051
Uniprot:Q08DS9
Length = 779
Score = 285 (105.4 bits), Expect = 5.5e-24, P = 5.5e-24
Identities = 77/209 (36%), Positives = 110/209 (52%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
G+RK V++TNI+ TS+TID I YVVD G K N + + + L+ IS + A QR GR
Sbjct: 337 GIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGR 396
Query: 89 AGRVQEGVCYHLYSRAR-EQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNT 147
AGR G C+ +YS+ Q D+ +PEI+RT L VV TL+ V R
Sbjct: 397 AGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIR-------- 448
Query: 148 AFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKML 207
F PY LDPP+ + +LK L DA+D H+T LG + + PL P + +
Sbjct: 449 -F-PY-------LDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAV 499
Query: 208 LMASIFSCVDPVFTVAASLGFKDAFYCPM 236
+ A+ C D + +AA L ++ F P+
Sbjct: 500 IKAASLDCEDLLLPIAAMLSVENVFIRPV 528
>UNIPROTKB|Q8IX18 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOVERGEN:HBG039428 EMBL:AF461690 EMBL:AF260270
EMBL:AK025713 EMBL:AK095681 EMBL:BC024187 EMBL:AL832510
EMBL:AF319521 IPI:IPI00410110 IPI:IPI00797226 IPI:IPI01010408
RefSeq:NP_001159773.1 RefSeq:NP_078888.4 UniGene:Hs.29403
ProteinModelPortal:Q8IX18 SMR:Q8IX18 IntAct:Q8IX18 STRING:Q8IX18
PhosphoSite:Q8IX18 DMDM:116247771 PaxDb:Q8IX18 PRIDE:Q8IX18
DNASU:79665 Ensembl:ENST00000251241 GeneID:79665 KEGG:hsa:79665
UCSC:uc002ixn.2 CTD:79665 GeneCards:GC17P057642 HGNC:HGNC:18018
HPA:HPA044350 MIM:607570 neXtProt:NX_Q8IX18 PharmGKB:PA27227
InParanoid:Q8IX18 OMA:LYGSMPT PhylomeDB:Q8IX18 ChiTaRS:DHX40
GenomeRNAi:79665 NextBio:68866 ArrayExpress:Q8IX18 Bgee:Q8IX18
CleanEx:HS_DHX40 Genevestigator:Q8IX18 GermOnline:ENSG00000108406
Uniprot:Q8IX18
Length = 779
Score = 285 (105.4 bits), Expect = 5.5e-24, P = 5.5e-24
Identities = 77/209 (36%), Positives = 110/209 (52%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
G+RK V++TNI+ TS+TID I YVVD G K N + + + L+ IS + A QR GR
Sbjct: 337 GIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGR 396
Query: 89 AGRVQEGVCYHLYSRAR-EQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNT 147
AGR G C+ +YS+ Q D+ +PEI+RT L VV TL+ V R
Sbjct: 397 AGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIR-------- 448
Query: 148 AFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKML 207
F PY LDPP+ + +LK L DA+D H+T LG + + PL P + +
Sbjct: 449 -F-PY-------LDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAV 499
Query: 208 LMASIFSCVDPVFTVAASLGFKDAFYCPM 236
+ A+ C D + +AA L ++ F P+
Sbjct: 500 IKAASLDCEDLLLPIAAMLSVENVFIRPV 528
>UNIPROTKB|F1S235 [details] [associations]
symbol:LOC100519272 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:CU694896
RefSeq:XP_003131712.1 Ensembl:ENSSSCT00000019229 GeneID:100519272
KEGG:ssc:100519272 Uniprot:F1S235
Length = 779
Score = 285 (105.4 bits), Expect = 5.5e-24, P = 5.5e-24
Identities = 77/209 (36%), Positives = 110/209 (52%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
G+RK V++TNI+ TS+TID I YVVD G K N + + + L+ IS + A QR GR
Sbjct: 337 GIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGR 396
Query: 89 AGRVQEGVCYHLYSRAR-EQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNT 147
AGR G C+ +YS+ Q D+ +PEI+RT L VV TL+ V R
Sbjct: 397 AGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIR-------- 448
Query: 148 AFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKML 207
F PY LDPP+ + +LK L DA+D H+T LG + + PL P + +
Sbjct: 449 -F-PY-------LDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAV 499
Query: 208 LMASIFSCVDPVFTVAASLGFKDAFYCPM 236
+ A+ C D + +AA L ++ F P+
Sbjct: 500 IKAASLDCEDLLLPIAAMLSVENVFIRPV 528
>MGI|MGI:1914737 [details] [associations]
symbol:Dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide 40"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:1914737
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 EMBL:AL592222 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104421 CTD:79665 OMA:LYGSMPT EMBL:AK004610
EMBL:AK010512 EMBL:AK031000 EMBL:AK075991 EMBL:AL596111
EMBL:BC058276 IPI:IPI00453964 RefSeq:NP_080467.3 UniGene:Mm.260627
ProteinModelPortal:Q6PE54 SMR:Q6PE54 STRING:Q6PE54
PhosphoSite:Q6PE54 PaxDb:Q6PE54 PRIDE:Q6PE54
Ensembl:ENSMUST00000018569 GeneID:67487 KEGG:mmu:67487
UCSC:uc007ktc.1 InParanoid:Q6PE54 OrthoDB:EOG48PMJH NextBio:324718
Bgee:Q6PE54 CleanEx:MM_DHX40 Genevestigator:Q6PE54
GermOnline:ENSMUSG00000018425 Uniprot:Q6PE54
Length = 779
Score = 285 (105.4 bits), Expect = 5.5e-24, P = 5.5e-24
Identities = 77/209 (36%), Positives = 110/209 (52%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
G+RK V++TNI+ TS+TID I YVVD G K N + + + L+ IS + A QR GR
Sbjct: 337 GIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGR 396
Query: 89 AGRVQEGVCYHLYSRAR-EQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNT 147
AGR G C+ +YS+ Q D+ +PEI+RT L VV TL+ V R
Sbjct: 397 AGRTASGKCFRIYSKEFWSQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIR-------- 448
Query: 148 AFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKML 207
F PY LDPP+ + +LK L DA+D H+T LG + + PL P + +
Sbjct: 449 -F-PY-------LDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAV 499
Query: 208 LMASIFSCVDPVFTVAASLGFKDAFYCPM 236
+ A+ C D + +AA L ++ F P+
Sbjct: 500 IRAASLDCEDLLLPIAAMLSVENVFIRPV 528
>UNIPROTKB|E2RPC8 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 EMBL:AAEX03006584 EMBL:AAEX03006585
Ensembl:ENSCAFT00000027962 Uniprot:E2RPC8
Length = 781
Score = 285 (105.4 bits), Expect = 5.5e-24, P = 5.5e-24
Identities = 77/209 (36%), Positives = 110/209 (52%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
G+RK V++TNI+ TS+TID I YVVD G K N + + + L+ IS + A QR GR
Sbjct: 337 GIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGR 396
Query: 89 AGRVQEGVCYHLYSRAR-EQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNT 147
AGR G C+ +YS+ Q D+ +PEI+RT L VV TL+ V R
Sbjct: 397 AGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIR-------- 448
Query: 148 AFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKML 207
F PY LDPP+ + +LK L DA+D H+T LG + + PL P + +
Sbjct: 449 -F-PY-------LDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAV 499
Query: 208 LMASIFSCVDPVFTVAASLGFKDAFYCPM 236
+ A+ C D + +AA L ++ F P+
Sbjct: 500 IKAASLDCEDLLLPIAAMLSVENVFIRPV 528
>UNIPROTKB|H0YJJ2 [details] [associations]
symbol:TDRD9 "Putative ATP-dependent RNA helicase TDRD9"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 InterPro:IPR002999 GO:GO:0005524
GO:GO:0003676 GO:GO:0004386 Pfam:PF00567 SMART:SM00333
PROSITE:PS50304 EMBL:AL136001 EMBL:AL132712 HGNC:HGNC:20122
Ensembl:ENST00000557332 Uniprot:H0YJJ2
Length = 918
Score = 286 (105.7 bits), Expect = 5.8e-24, P = 5.8e-24
Identities = 75/218 (34%), Positives = 118/218 (54%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
G RKI+L+TNIAE+S+T+ D+ YV+D T+ D N +L+ W S + QR+GR
Sbjct: 164 GYRKIILSTNIAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCNQRKGR 223
Query: 89 AGRVQEGVCYHLYSRAR-EQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNT 147
AGRV G CY L + + + D+ +PE+ R L + L+ K M R +L T
Sbjct: 224 AGRVSRGYCYRLVHKDFWDNSIPDHVVPEMLRCPLGSTI--LKVKLLDMGEPR--ALLAT 279
Query: 148 AFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDAL-------DDDEH---LTPLGYHLAKL 197
A L PP + ++ ++ LL+ + AL D++ H LT LG LA+L
Sbjct: 280 A-----------LSPPGLSDIERTILLLKEVGALAVSGQREDENPHDGELTFLGRVLAQL 328
Query: 198 PLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCP 235
P++ Q+GK++++ +F C+D +AA+L K+ F P
Sbjct: 329 PVNQQLGKLIVLGHVFGCLDECLIIAAALSLKNFFAMP 366
>ASPGD|ASPL0000052850 [details] [associations]
symbol:AN1363 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:BN001308 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K13117
EMBL:AACD01000018 OrthoDB:EOG4BGD47 RefSeq:XP_658967.1
EnsemblFungi:CADANIAT00001248 GeneID:2877144 KEGG:ani:AN1363.2
OMA:VAEEMRC Uniprot:Q5BDL7
Length = 670
Score = 283 (104.7 bits), Expect = 6.5e-24, P = 6.5e-24
Identities = 81/222 (36%), Positives = 118/222 (53%)
Query: 15 SGLKHLQNKSVFELG---VRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIAT 71
+GL Q VFE RK+V++TNIAE S+TI+ IVYVVDCG K+ +D I T
Sbjct: 287 AGLTTDQQMYVFEPAPENTRKVVVSTNIAEASVTINGIVYVVDCGFAKLRAYDPSTGIET 346
Query: 72 LKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDEVVRTLES 131
L IS A A QR GRAGR + G C+ LY++ + D +PEIQR+ L V+ L++
Sbjct: 347 LTAVPISKAAAVQRAGRAGRTKPGKCFRLYTQHAYEQLPDATIPEIQRSNLAPVIMQLKA 406
Query: 132 KKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLG 191
+ R F + + P P ++ + +L L L ID D + PLG
Sbjct: 407 LGIDNIVR-FDFLTS----P----PADLVI----RAFEL-LYSLGAID--DYAKLTKPLG 450
Query: 192 YHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAFY 233
+A+L +DP + K+LL A F C+ + T+AA + + A +
Sbjct: 451 MRMAELAVDPMMAKVLLSAQSFGCLSEILTIAAMVSLQGAVW 492
>UNIPROTKB|J9NVQ3 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:AAEX03006584
EMBL:AAEX03006585 Ensembl:ENSCAFT00000048714 Uniprot:J9NVQ3
Length = 857
Score = 285 (105.4 bits), Expect = 6.5e-24, P = 6.5e-24
Identities = 77/209 (36%), Positives = 110/209 (52%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
G+RK V++TNI+ TS+TID I YVVD G K N + + + L+ IS + A QR GR
Sbjct: 415 GIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGR 474
Query: 89 AGRVQEGVCYHLYSRAR-EQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNT 147
AGR G C+ +YS+ Q D+ +PEI+RT L VV TL+ V R
Sbjct: 475 AGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIR-------- 526
Query: 148 AFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKML 207
F PY LDPP+ + +LK L DA+D H+T LG + + PL P + +
Sbjct: 527 -F-PY-------LDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAV 577
Query: 208 LMASIFSCVDPVFTVAASLGFKDAFYCPM 236
+ A+ C D + +AA L ++ F P+
Sbjct: 578 IKAASLDCEDLLLPIAAMLSVENVFIRPV 606
>RGD|1359618 [details] [associations]
symbol:Dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide 40"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1359618 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104421 CTD:79665 OMA:LYGSMPT
OrthoDB:EOG48PMJH EMBL:BC083821 IPI:IPI00369962
RefSeq:NP_001005873.1 UniGene:Rn.29182 ProteinModelPortal:Q5XI69
PhosphoSite:Q5XI69 Ensembl:ENSRNOT00000006926 GeneID:287595
KEGG:rno:287595 InParanoid:Q5XI69 NextBio:626568
ArrayExpress:Q5XI69 Genevestigator:Q5XI69
GermOnline:ENSRNOG00000004549 Uniprot:Q5XI69
Length = 779
Score = 284 (105.0 bits), Expect = 7.0e-24, P = 7.0e-24
Identities = 77/209 (36%), Positives = 110/209 (52%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
G+RK V++TNI+ TS+TID I YVVD G K N + + + L+ IS + A QR GR
Sbjct: 337 GIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGR 396
Query: 89 AGRVQEGVCYHLYSRAR-EQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNT 147
AGR G C+ +YS+ Q D+ +PEI+RT L VV TL+ V R
Sbjct: 397 AGRTASGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIR-------- 448
Query: 148 AFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKML 207
F PY LDPP+ + +LK L DA+D H+T LG + + PL P + +
Sbjct: 449 -F-PY-------LDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAV 499
Query: 208 LMASIFSCVDPVFTVAASLGFKDAFYCPM 236
+ A+ C D + +AA L ++ F P+
Sbjct: 500 IRAASLDCEDLLLPIAAMLSVENVFIRPV 528
>SGD|S000004735 [details] [associations]
symbol:ECM16 "Essential DEAH-box ATP-dependent RNA helicase
specific to U3 snoRNP" species:4932 "Saccharomyces cerevisiae"
[GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0000462 "maturation
of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] [GO:0042254 "ribosome biogenesis"
evidence=IEA;IDA;TAS] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0030686 "90S
preribosome" evidence=IDA] [GO:0003724 "RNA helicase activity"
evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000004735 GO:GO:0005739 GO:GO:0005524
GO:GO:0005730 GO:GO:0003723 EMBL:BK006946 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0030686 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0032040 GO:GO:0008026
GO:GO:0003724 GO:GO:0000462 EMBL:Z48622 PIR:S53058
RefSeq:NP_013847.1 ProteinModelPortal:Q04217 SMR:Q04217
DIP:DIP-6722N IntAct:Q04217 MINT:MINT-614026 STRING:Q04217
PaxDb:Q04217 PeptideAtlas:Q04217 PRIDE:Q04217 EnsemblFungi:YMR128W
GeneID:855158 KEGG:sce:YMR128W CYGD:YMR128w
GeneTree:ENSGT00550000074985 HOGENOM:HOG000201240 KO:K14780
OMA:HQLKREE OrthoDB:EOG4KM2B8 NextBio:978575 Genevestigator:Q04217
GermOnline:YMR128W Uniprot:Q04217
Length = 1267
Score = 287 (106.1 bits), Expect = 7.5e-24, P = 7.5e-24
Identities = 69/205 (33%), Positives = 112/205 (54%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
G R ++ATN+AETS+TI + YVVD G++K ++ + + + + W+S A+A QR GR
Sbjct: 753 GSRLCIVATNVAETSLTIPGVRYVVDSGRSKERKYNESNGVQSFEVGWVSKASANQRSGR 812
Query: 89 AGRVQEGVCYHLYSRAR-EQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNT 147
AGR G CY LYS A E F+ + PEI R ++ +V +M S ++N
Sbjct: 813 AGRTGPGHCYRLYSSAVFEHDFEQFSKPEILRMPVESIV-------LQMKSMAIHNIINF 865
Query: 148 AFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKML 207
F P PPD ++ +++LL+ + ALD+ E +T G ++ PL P+ KML
Sbjct: 866 PF------PT----PPDRVALSKAIQLLQYLGALDNKEMITEDGKKMSLFPLSPRFSKML 915
Query: 208 LMASIFSCVDPVFTVAASLGFKDAF 232
L++ +C+ + + ++L D F
Sbjct: 916 LVSDEKACLPYIVAIVSALSVGDPF 940
>WB|WBGene00004355 [details] [associations]
symbol:rha-1 species:6239 "Caenorhabditis elegans"
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000003 "reproduction"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0007281 "germ cell development"
evidence=IMP] [GO:0045814 "negative regulation of gene expression,
epigenetic" evidence=IMP] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 GO:GO:0005524 GO:GO:0005634
GO:GO:0009792 GO:GO:0051301 GO:GO:0007067 GO:GO:0006355
GO:GO:0003677 Gene3D:3.30.160.20 GO:GO:0006351 GO:GO:0007281
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000247063 GeneTree:ENSGT00550000074257 KO:K13184
EMBL:Z50071 PIR:T24664 RefSeq:NP_495890.2 ProteinModelPortal:Q22307
SMR:Q22307 STRING:Q22307 PaxDb:Q22307 EnsemblMetazoa:T07D4.3.1
EnsemblMetazoa:T07D4.3.2 GeneID:174417 KEGG:cel:CELE_T07D4.3
UCSC:T07D4.3 CTD:174417 WormBase:T07D4.3 InParanoid:Q22307
OMA:DDWIRLQ NextBio:883938 GO:GO:0045814 Uniprot:Q22307
Length = 1301
Score = 287 (106.1 bits), Expect = 7.8e-24, P = 7.8e-24
Identities = 76/220 (34%), Positives = 114/220 (51%)
Query: 15 SGLKHLQNKSVFEL--GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATL 72
S L + + VF G RKI+++TNIAETSITIDD+VYV+D K K + +N+
Sbjct: 698 SQLTSQEQRKVFNHYPGKRKIIVSTNIAETSITIDDVVYVIDSCKAKERMYTSNNNMVHF 757
Query: 73 KPEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDEVVRTLESK 132
W S N QRRGRAGRV+ G +HL S+ R + D+ E+ R L ++ T++
Sbjct: 758 ATVWASKTNVIQRRGRAGRVRAGYAFHLCSKMRFEALDDHGTAEMLRIPLHQIALTIKLL 817
Query: 133 KFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGY 192
+ V L A P PP V+ S +L+ + ALD + LT LG
Sbjct: 818 RLGSVGE----FLGKALQP----------PPYDMVVE-SEAVLQAMGALDRNLELTSLGK 862
Query: 193 HLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAF 232
LA++P++P I K+L++ + + VA+++ F F
Sbjct: 863 MLARMPIEPVIAKVLILGTALGAGSVMCDVASAMSFPTPF 902
>WB|WBGene00009922 [details] [associations]
symbol:F52B5.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] InterPro:IPR001374 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF01424 Pfam:PF04408 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00393 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0009792 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:Z75541
PIR:T22493 RefSeq:NP_492260.1 ProteinModelPortal:Q20644 SMR:Q20644
STRING:Q20644 PaxDb:Q20644 EnsemblMetazoa:F52B5.3 GeneID:172615
KEGG:cel:CELE_F52B5.3 UCSC:F52B5.3 CTD:172615 WormBase:F52B5.3
InParanoid:Q20644 OMA:NSMPETQ NextBio:876269 Uniprot:Q20644
Length = 1425
Score = 276 (102.2 bits), Expect = 8.5e-24, Sum P(2) = 8.5e-24
Identities = 74/218 (33%), Positives = 116/218 (53%)
Query: 31 RKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAG 90
RKI+LATNIAE SITI+D+++VVD GK K +FD + ++TL + I+ +NA QR GRAG
Sbjct: 703 RKIILATNIAEASITIEDVIFVVDTGKVKEKSFDHEAKLSTLTVKPIARSNADQRSGRAG 762
Query: 91 RVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNTAFT 150
RV G C LY+ + + + E++R + +V TL +K F + + L+ A
Sbjct: 763 RVANGYCIRLYTEQEYNSMPETQIAEMKRAAIYDV--TLHAKLFAPKTLKISEFLSLAPE 820
Query: 151 P--------YVWVPKQV--LDPP----DPASVQLSLKLLRLIDALD--DDEHLTPLGYHL 194
P + +Q+ P D + + LK + + +D LT LG +
Sbjct: 821 PPEKESILQAITFLEQIGAFYTPIKIYDNSGNEEGLKNDEEAENSENPEDPELTDLGRLM 880
Query: 195 AKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAF 232
A+LPLDPQ+ +MLL C+ P+ + A L ++ +
Sbjct: 881 ARLPLDPQLSRMLLFGLALKCLTPIVNLVALLASREPY 918
Score = 40 (19.1 bits), Expect = 8.5e-24, Sum P(2) = 8.5e-24
Identities = 9/36 (25%), Positives = 15/36 (41%)
Query: 307 HNYAHDYCRENFXXXXXXXXXRDMKDQFSRTMHEMN 342
H+Y+H+Y ++ + QF H MN
Sbjct: 1326 HHYSHNYSYPHYNIQLPQNQYQSWTPQFD--FHSMN 1359
>MGI|MGI:1921941 [details] [associations]
symbol:Tdrd9 "tudor domain containing 9" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007126 "meiosis" evidence=IEA] [GO:0007140 "male meiosis"
evidence=IMP] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IMP]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0009566 "fertilization" evidence=IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
[GO:0034587 "piRNA metabolic process" evidence=IMP] [GO:0043046
"DNA methylation involved in gamete generation" evidence=IMP]
[GO:0071547 "piP-body" evidence=IDA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
InterPro:IPR002999 MGI:MGI:1921941 GO:GO:0007275 GO:GO:0005524
GO:GO:0005634 GO:GO:0030154 GO:GO:0009566 GO:GO:0007283
GO:GO:0003676 GO:GO:0031047 GO:GO:0007140 Pfam:PF00567
SMART:SM00333 PROSITE:PS50304 GO:GO:0043046 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0034587 eggNOG:COG1643
GeneTree:ENSGT00700000104393 GO:GO:0008026 GO:GO:0071547
EMBL:AC112520 OMA:INDWFTI CTD:122402 OrthoDB:EOG4F4S96
EMBL:AB362563 EMBL:AC132623 EMBL:BC115831 EMBL:BC116656
IPI:IPI00749982 IPI:IPI00849630 IPI:IPI00914159 RefSeq:NP_083332.1
UniGene:Mm.60648 ProteinModelPortal:Q14BI7 SMR:Q14BI7 STRING:Q14BI7
PhosphoSite:Q14BI7 PaxDb:Q14BI7 PRIDE:Q14BI7
Ensembl:ENSMUST00000079009 GeneID:74691 KEGG:mmu:74691
UCSC:uc007pei.1 UCSC:uc007pej.1 UCSC:uc011yva.1
HOGENOM:HOG000047965 HOVERGEN:HBG072266 InParanoid:B1Q3J8
NextBio:341402 Bgee:Q14BI7 Genevestigator:Q14BI7 Uniprot:Q14BI7
Length = 1383
Score = 287 (106.1 bits), Expect = 8.5e-24, P = 8.5e-24
Identities = 76/218 (34%), Positives = 117/218 (53%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
G RKI+L+TNIAE+S+T+ D+ YV+D T+ D N +L+ W S + QR+GR
Sbjct: 438 GYRKIILSTNIAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCDQRKGR 497
Query: 89 AGRVQEGVCYHLYSRAR-EQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNT 147
AGRV +G CY L R + D+ +PE+ R L + L+ K M R +L T
Sbjct: 498 AGRVSKGYCYRLIPRDFWDSAIPDHVVPEMLRCPLGSTI--LKVKLLDMGEPR--ALLAT 553
Query: 148 AFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDAL-------DDDEH---LTPLGYHLAKL 197
A L PP + ++ ++ LL+ + AL D++ H LT LG LA+L
Sbjct: 554 A-----------LSPPSLSDIERTILLLKEVGALAVSGQREDENPHDGELTFLGRVLAQL 602
Query: 198 PLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCP 235
P+ Q+GK++++ +F C+D +AA+L K+ F P
Sbjct: 603 PVSQQLGKLVVLGHVFGCLDECLIIAAALSLKNFFTMP 640
>UNIPROTKB|G4NHA6 [details] [associations]
symbol:MGG_03893 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp43" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:CM001236 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12820 RefSeq:XP_003719983.1
EnsemblFungi:MGG_03893T0 GeneID:2677480 KEGG:mgr:MGG_03893
Uniprot:G4NHA6
Length = 779
Score = 283 (104.7 bits), Expect = 9.0e-24, P = 9.0e-24
Identities = 76/208 (36%), Positives = 114/208 (54%)
Query: 31 RKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAG 90
RK ++ATNIAETS+TID IVYVVD G +K ++ + + +L IS A+A+QR GRAG
Sbjct: 386 RKCIVATNIAETSLTIDGIVYVVDPGFSKQKIYNARIRVESLLVTPISRASAQQRAGRAG 445
Query: 91 RVQEGVCYHLYSRA---REQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNT 147
R + G C+ LY+ A +E Q YP EI R+ L + LE KK + +++
Sbjct: 446 RTRPGKCFRLYTEAAFKKELIEQTYP--EILRSNLSNTI--LELKKLGVDD-----LVHF 496
Query: 148 AFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKML 207
F +DPP P ++ +L+ L + L+DD LT LG+ ++ PLDP + ML
Sbjct: 497 DF----------MDPPAPETMMRALEELNYLSCLNDDGDLTDLGHMASEYPLDPALAVML 546
Query: 208 LMASIFSCVDPVFTVAASLGFKDAFYCP 235
+ + F C + + +V + L F P
Sbjct: 547 VSSPEFYCSNEMLSVTSLLSVPQVFMRP 574
>WB|WBGene00003389 [details] [associations]
symbol:mog-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0042127 "regulation of cell proliferation"
evidence=IMP] [GO:0040020 "regulation of meiosis" evidence=IMP]
[GO:0007281 "germ cell development" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0006898 GO:GO:0002119
GO:GO:0008380 GO:GO:0006397 GO:GO:0010171 GO:GO:0003676
GO:GO:0042127 GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0040022 GO:GO:0008026 HOGENOM:HOG000175261
EMBL:Z29560 KO:K12815 EMBL:AF120269 PIR:F88570 PIR:S41025
RefSeq:NP_499212.1 UniGene:Cel.5743 ProteinModelPortal:P34498
SMR:P34498 IntAct:P34498 STRING:P34498 PaxDb:P34498 PRIDE:P34498
EnsemblMetazoa:K03H1.2 GeneID:176409 KEGG:cel:CELE_K03H1.2
UCSC:K03H1.2.1 CTD:176409 WormBase:K03H1.2
GeneTree:ENSGT00700000104877 InParanoid:P34498 OMA:PSRSTWE
NextBio:892452 Uniprot:P34498
Length = 1131
Score = 285 (105.4 bits), Expect = 1.0e-23, P = 1.0e-23
Identities = 78/211 (36%), Positives = 113/211 (53%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
G+RK ++ATNIAETS+T+D I++V+D G KM ++ + + L +S A+A QR GR
Sbjct: 707 GMRKAIVATNIAETSLTVDGILFVIDPGFCKMKVYNPRIGMDALSIFPVSQASANQRTGR 766
Query: 89 AGRVQEGVCYHLYSRAREQTFQDYPL----PEIQRTRLDEVVRTLESKKFKMVSRRFKVM 144
AGR G CY LY+ E+ F+D L PEIQRT L VV L+S + + F M
Sbjct: 767 AGRTGPGQCYRLYT---ERQFKDELLKSTVPEIQRTNLANVVLLLKSLGVDDLLK-FHFM 822
Query: 145 LNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIG 204
D P ++ S+ L + ALD+ LTP+G + + PLDP +
Sbjct: 823 ----------------DAPPQDNMLNSMYQLWTLGALDNTGQLTPMGRKMVEFPLDPTLS 866
Query: 205 KMLLMASIFSCVDPVFTVAASLGFKDAFYCP 235
KML+M++ C D V T+ + L F+ P
Sbjct: 867 KMLIMSAEMGCSDEVLTIVSMLSVPAIFFRP 897
Score = 130 (50.8 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 27/107 (25%), Positives = 50/107 (46%)
Query: 235 PMIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQGAKSDYVVL 294
P + KML+M++ C D V T+ + L F+ P E++ D +K Q +SD++
Sbjct: 863 PTLSKMLIMSAEMGCSDEVLTIVSMLSVPAIFFRPKGREEEADAKKEKF-QVPESDHLTF 921
Query: 295 INAMQGWEQALEHNYAHDYCRENFXXXXXXXXXRDMKDQFSRTMHEM 341
+N W H Y+ +C +N+ R+++ Q M ++
Sbjct: 922 LNVYIQWRT---HKYSAKWCADNYLHVKALKKVREVRAQLKEIMQDL 965
>UNIPROTKB|P34498 [details] [associations]
symbol:mog-1 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-1" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0009792 GO:GO:0006898
GO:GO:0002119 GO:GO:0008380 GO:GO:0006397 GO:GO:0010171
GO:GO:0003676 GO:GO:0042127 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0040022 GO:GO:0008026
HOGENOM:HOG000175261 EMBL:Z29560 KO:K12815 EMBL:AF120269 PIR:F88570
PIR:S41025 RefSeq:NP_499212.1 UniGene:Cel.5743
ProteinModelPortal:P34498 SMR:P34498 IntAct:P34498 STRING:P34498
PaxDb:P34498 PRIDE:P34498 EnsemblMetazoa:K03H1.2 GeneID:176409
KEGG:cel:CELE_K03H1.2 UCSC:K03H1.2.1 CTD:176409 WormBase:K03H1.2
GeneTree:ENSGT00700000104877 InParanoid:P34498 OMA:PSRSTWE
NextBio:892452 Uniprot:P34498
Length = 1131
Score = 285 (105.4 bits), Expect = 1.0e-23, P = 1.0e-23
Identities = 78/211 (36%), Positives = 113/211 (53%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
G+RK ++ATNIAETS+T+D I++V+D G KM ++ + + L +S A+A QR GR
Sbjct: 707 GMRKAIVATNIAETSLTVDGILFVIDPGFCKMKVYNPRIGMDALSIFPVSQASANQRTGR 766
Query: 89 AGRVQEGVCYHLYSRAREQTFQDYPL----PEIQRTRLDEVVRTLESKKFKMVSRRFKVM 144
AGR G CY LY+ E+ F+D L PEIQRT L VV L+S + + F M
Sbjct: 767 AGRTGPGQCYRLYT---ERQFKDELLKSTVPEIQRTNLANVVLLLKSLGVDDLLK-FHFM 822
Query: 145 LNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIG 204
D P ++ S+ L + ALD+ LTP+G + + PLDP +
Sbjct: 823 ----------------DAPPQDNMLNSMYQLWTLGALDNTGQLTPMGRKMVEFPLDPTLS 866
Query: 205 KMLLMASIFSCVDPVFTVAASLGFKDAFYCP 235
KML+M++ C D V T+ + L F+ P
Sbjct: 867 KMLIMSAEMGCSDEVLTIVSMLSVPAIFFRP 897
Score = 130 (50.8 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 27/107 (25%), Positives = 50/107 (46%)
Query: 235 PMIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQGAKSDYVVL 294
P + KML+M++ C D V T+ + L F+ P E++ D +K Q +SD++
Sbjct: 863 PTLSKMLIMSAEMGCSDEVLTIVSMLSVPAIFFRPKGREEEADAKKEKF-QVPESDHLTF 921
Query: 295 INAMQGWEQALEHNYAHDYCRENFXXXXXXXXXRDMKDQFSRTMHEM 341
+N W H Y+ +C +N+ R+++ Q M ++
Sbjct: 922 LNVYIQWRT---HKYSAKWCADNYLHVKALKKVREVRAQLKEIMQDL 965
>UNIPROTKB|Q8NDG6 [details] [associations]
symbol:TDRD9 "Putative ATP-dependent RNA helicase TDRD9"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0031047 "gene silencing by
RNA" evidence=IEA] [GO:0005634 "nucleus" evidence=ISS] [GO:0034587
"piRNA metabolic process" evidence=ISS] [GO:0007283
"spermatogenesis" evidence=ISS] [GO:0071547 "piP-body"
evidence=ISS] [GO:0043046 "DNA methylation involved in gamete
generation" evidence=ISS] [GO:0009566 "fertilization" evidence=ISS]
[GO:0007140 "male meiosis" evidence=ISS] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
InterPro:IPR002999 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0030154 GO:GO:0009566 GO:GO:0007283 GO:GO:0003676
GO:GO:0031047 GO:GO:0007140 Pfam:PF00567 SMART:SM00333
PROSITE:PS50304 GO:GO:0043046 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0034587 eggNOG:COG1643 GO:GO:0008026
GO:GO:0071547 EMBL:AL136001 OMA:INDWFTI EMBL:AL132712 EMBL:AL833915
EMBL:AK093483 EMBL:AK097429 EMBL:AK097699 EMBL:AK125978
EMBL:BC016796 EMBL:BC128057 IPI:IPI00384419 IPI:IPI00413613
PIR:G02632 RefSeq:NP_694591.2 UniGene:Hs.21454
ProteinModelPortal:Q8NDG6 SMR:Q8NDG6 STRING:Q8NDG6
PhosphoSite:Q8NDG6 DMDM:290457664 PaxDb:Q8NDG6 PRIDE:Q8NDG6
Ensembl:ENST00000339063 Ensembl:ENST00000409874 GeneID:122402
KEGG:hsa:122402 UCSC:uc001yom.4 UCSC:uc001yon.4 CTD:122402
GeneCards:GC14P104394 HGNC:HGNC:20122 HPA:HPA038120
neXtProt:NX_Q8NDG6 PharmGKB:PA134890186 InParanoid:Q8NDG6
OrthoDB:EOG4F4S96 GenomeRNAi:122402 NextBio:80877 Bgee:Q8NDG6
CleanEx:HS_TDRD9 Genevestigator:Q8NDG6 Uniprot:Q8NDG6
Length = 1382
Score = 286 (105.7 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 75/218 (34%), Positives = 118/218 (54%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
G RKI+L+TNIAE+S+T+ D+ YV+D T+ D N +L+ W S + QR+GR
Sbjct: 437 GYRKIILSTNIAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCNQRKGR 496
Query: 89 AGRVQEGVCYHLYSRAR-EQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNT 147
AGRV G CY L + + + D+ +PE+ R L + L+ K M R +L T
Sbjct: 497 AGRVSRGYCYRLVHKDFWDNSIPDHVVPEMLRCPLGSTI--LKVKLLDMGEPR--ALLAT 552
Query: 148 AFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDAL-------DDDEH---LTPLGYHLAKL 197
A L PP + ++ ++ LL+ + AL D++ H LT LG LA+L
Sbjct: 553 A-----------LSPPGLSDIERTILLLKEVGALAVSGQREDENPHDGELTFLGRVLAQL 601
Query: 198 PLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCP 235
P++ Q+GK++++ +F C+D +AA+L K+ F P
Sbjct: 602 PVNQQLGKLIVLGHVFGCLDECLIIAAALSLKNFFAMP 639
>UNIPROTKB|B4DVG8 [details] [associations]
symbol:DHX38 "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 GO:GO:0004386
InterPro:IPR011709 Pfam:PF07717 HOGENOM:HOG000175261 EMBL:AC009087
UniGene:Hs.151218 HGNC:HGNC:17211 ChiTaRS:DHX38 EMBL:AK301074
IPI:IPI00909589 SMR:B4DVG8 STRING:B4DVG8 Ensembl:ENST00000536867
UCSC:uc010vmp.2 HOVERGEN:HBG093770 Uniprot:B4DVG8
Length = 539
Score = 278 (102.9 bits), Expect = 1.2e-23, P = 1.2e-23
Identities = 74/208 (35%), Positives = 110/208 (52%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
GVRK ++ATNIAETS+T+D I++V+D G K+ F+ + + L+ IS ANA QR GR
Sbjct: 109 GVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGR 168
Query: 89 AGRVQEGVCYHLYSR-AREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNT 147
AGR G C+ LY++ A + +PEIQRT L VV L+S + +L
Sbjct: 169 AGRTGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQD-------LLQF 221
Query: 148 AFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKML 207
F +DPP ++ S+ L ++ ALD+ LT G + + PLDP + KML
Sbjct: 222 HF----------MDPPPEDNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKML 271
Query: 208 LMASIFSCVDPVFTVAASLGFKDAFYCP 235
+++ C + + + L FY P
Sbjct: 272 IVSCDMGCSSEILLIVSMLSVPAIFYRP 299
>UNIPROTKB|Q9KS77 [details] [associations]
symbol:VC1382 "ATP-dependent helicase HrpA" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0004386
"helicase activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GenomeReviews:AE003852_GR GO:GO:0003676 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 InterPro:IPR024590 Pfam:PF11898
TIGRFAMs:TIGR01967 EMBL:AE004217 PIR:F82207 RefSeq:NP_231026.2
ProteinModelPortal:Q9KS77 DNASU:2614836 GeneID:2614836
KEGG:vch:VC1382 PATRIC:20081832 Uniprot:Q9KS77
Length = 1309
Score = 282 (104.3 bits), Expect = 2.7e-23, P = 2.7e-23
Identities = 76/212 (35%), Positives = 118/212 (55%)
Query: 21 QNKSVFELGV-RKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISL 79
QNK +F+ R+IVLATN+AETS+T+ I YV+D G ++S + + + L E IS
Sbjct: 343 QNK-IFQPHAGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQ 401
Query: 80 ANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSR 139
A+A QR+GR GR +EG+C LYS + ++ PEI RT L V+ + + +
Sbjct: 402 ASANQRKGRCGRTEEGICIRLYSEEDFLSRPEFTDPEILRTNLASVILQMTALGLGDIE- 460
Query: 140 RFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDE-HLTPLGYHLAKLP 198
AF P+V P + + D V+L +L + D + D + LT G LA+LP
Sbjct: 461 --------AF-PFVEAPDK-RNIQD--GVRLLEELGAINDQIKDPKKRLTESGKQLARLP 508
Query: 199 LDPQIGKMLLMASIFSCVDPVFTVAASLGFKD 230
+DP++ +M+L AS C+ V +A++L +D
Sbjct: 509 IDPRLARMVLEASKLGCLKEVMIIASALSIQD 540
>TIGR_CMR|VC_1382 [details] [associations]
symbol:VC_1382 "ATP-dependent helicase HrpA" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0004386 "helicase activity"
evidence=ISS] [GO:0008152 "metabolic process" evidence=ISS]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR010222 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GenomeReviews:AE003852_GR GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 InterPro:IPR024590 Pfam:PF11898
TIGRFAMs:TIGR01967 EMBL:AE004217 PIR:F82207 RefSeq:NP_231026.2
ProteinModelPortal:Q9KS77 DNASU:2614836 GeneID:2614836
KEGG:vch:VC1382 PATRIC:20081832 Uniprot:Q9KS77
Length = 1309
Score = 282 (104.3 bits), Expect = 2.7e-23, P = 2.7e-23
Identities = 76/212 (35%), Positives = 118/212 (55%)
Query: 21 QNKSVFELGV-RKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISL 79
QNK +F+ R+IVLATN+AETS+T+ I YV+D G ++S + + + L E IS
Sbjct: 343 QNK-IFQPHAGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQ 401
Query: 80 ANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSR 139
A+A QR+GR GR +EG+C LYS + ++ PEI RT L V+ + + +
Sbjct: 402 ASANQRKGRCGRTEEGICIRLYSEEDFLSRPEFTDPEILRTNLASVILQMTALGLGDIE- 460
Query: 140 RFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDE-HLTPLGYHLAKLP 198
AF P+V P + + D V+L +L + D + D + LT G LA+LP
Sbjct: 461 --------AF-PFVEAPDK-RNIQD--GVRLLEELGAINDQIKDPKKRLTESGKQLARLP 508
Query: 199 LDPQIGKMLLMASIFSCVDPVFTVAASLGFKD 230
+DP++ +M+L AS C+ V +A++L +D
Sbjct: 509 IDPRLARMVLEASKLGCLKEVMIIASALSIQD 540
>UNIPROTKB|F1S3A8 [details] [associations]
symbol:DHX38 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104877 EMBL:CU914723
Ensembl:ENSSSCT00000003045 OMA:IATIPEI Uniprot:F1S3A8
Length = 766
Score = 278 (102.9 bits), Expect = 3.0e-23, P = 3.0e-23
Identities = 74/208 (35%), Positives = 110/208 (52%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
GVRK ++ATNIAETS+T+D I++V+D G K+ F+ + + L+ IS ANA QR GR
Sbjct: 336 GVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGR 395
Query: 89 AGRVQEGVCYHLYSR-AREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNT 147
AGR G C+ LY++ A + +PEIQRT L VV L+S + +L
Sbjct: 396 AGRTGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQD-------LLQF 448
Query: 148 AFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKML 207
F +DPP ++ S+ L ++ ALD+ LT G + + PLDP + KML
Sbjct: 449 HF----------MDPPPEDNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKML 498
Query: 208 LMASIFSCVDPVFTVAASLGFKDAFYCP 235
+++ C + + + L FY P
Sbjct: 499 IVSCDMGCSSEILLIVSMLSVPAIFYRP 526
>DICTYBASE|DDB_G0287351 [details] [associations]
symbol:dhx37 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=ISS] [GO:0005732 "small nucleolar ribonucleoprotein
complex" evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0287351
GO:GO:0005524 GO:GO:0005730 GenomeReviews:CM000154_GR GO:GO:0003676
GO:GO:0042254 EMBL:AAFI02000100 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0003724 KO:K14780 GO:GO:0005732
RefSeq:XP_637255.1 STRING:Q54KG8 EnsemblProtists:DDB0235265
GeneID:8626085 KEGG:ddi:DDB_G0287351 InParanoid:Q54KG8 OMA:HERNLNT
Uniprot:Q54KG8
Length = 1461
Score = 282 (104.3 bits), Expect = 3.1e-23, P = 3.1e-23
Identities = 75/208 (36%), Positives = 116/208 (55%)
Query: 28 LGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDN-IATLKPEWISLANAKQRR 86
LG R +V+ATN+AETS+TI +I YVVD G+ K ++ KDN I++ + W S A+A QR
Sbjct: 869 LGSRLVVVATNLAETSLTIPNIKYVVDTGRVKQRYYN-KDNGISSFEVGWTSKASADQRA 927
Query: 87 GRAGRVQEGVCYHLYSRAR-EQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVML 145
GRAGR G CY +YS A FQ + PEI +D ++ ++S + +
Sbjct: 928 GRAGRTGPGHCYRIYSSAVFNDHFQQFSKPEILMIPIDGMILQMKSMGIQKI-------- 979
Query: 146 NTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEH-LTPLGYHLAKLPLDPQIG 204
T F P+ P PPD +S++L+L+ L + AL+ +T LG +++ P+ P+
Sbjct: 980 -TGF-PF---PT----PPDESSLKLALRTLINLGALEVKTFSITELGMKMSQFPVSPRHS 1030
Query: 205 KMLLMASIFSCVDPVFTVAASLGFKDAF 232
KMLL+ +C+ + + + L KD F
Sbjct: 1031 KMLLLGQEHNCLPYIIAIVSILTVKDPF 1058
>UNIPROTKB|F5H3Y4 [details] [associations]
symbol:DHX37 "Probable ATP-dependent RNA helicase DHX37"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 IPI:IPI00217630 HGNC:HGNC:17210
EMBL:AC093719 ProteinModelPortal:F5H3Y4 SMR:F5H3Y4
Ensembl:ENST00000544745 ArrayExpress:F5H3Y4 Bgee:F5H3Y4
Uniprot:F5H3Y4
Length = 962
Score = 279 (103.3 bits), Expect = 3.5e-23, P = 3.5e-23
Identities = 69/208 (33%), Positives = 108/208 (51%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
G R V+ATN+AETS+TI I YVVDCGK K +D +++ + W+S A+A QR GR
Sbjct: 399 GTRLCVVATNVAETSLTIPGIKYVVDCGKVKKRYYDRVTGVSSFRVTWVSQASADQRAGR 458
Query: 89 AGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDEVVRTLESKKF-KMVSRRFKVMLNT 147
AGR + G CY LYS A F+ +P PEI R +++++ +++ K+++ F +
Sbjct: 459 AGRTEPGHCYRLYSSAVFGDFEQFPPPEITRRPVEDLILQMKALNVEKVINFPFPTPPSV 518
Query: 148 AF---TPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIG 204
+ + L PP A L+ RL + T LG +A P+ P+
Sbjct: 519 EALLAAEELLIALGALQPPQKAERVKQLQENRLSCPI------TALGRTMATFPVAPRYA 572
Query: 205 KMLLMASIFSCVDPVFTVAASLGFKDAF 232
KML ++ C+ T+ AS+ ++ F
Sbjct: 573 KMLALSRQHGCLPYAITIVASMTVRELF 600
>UNIPROTKB|Q8IY37 [details] [associations]
symbol:DHX37 "Probable ATP-dependent RNA helicase DHX37"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000201240 KO:K14780 EMBL:BC002575 EMBL:BC037964
EMBL:AB040950 IPI:IPI00217630 RefSeq:NP_116045.2 UniGene:Hs.107382
ProteinModelPortal:Q8IY37 SMR:Q8IY37 IntAct:Q8IY37 STRING:Q8IY37
PhosphoSite:Q8IY37 DMDM:38257651 PaxDb:Q8IY37 PRIDE:Q8IY37
Ensembl:ENST00000308736 GeneID:57647 KEGG:hsa:57647 UCSC:uc001ugy.3
CTD:57647 GeneCards:GC12M125431 HGNC:HGNC:17210 HPA:HPA047607
neXtProt:NX_Q8IY37 PharmGKB:PA27224 HOVERGEN:HBG051356
InParanoid:Q8IY37 OMA:AKLQPRT OrthoDB:EOG4P2Q1J PhylomeDB:Q8IY37
GenomeRNAi:57647 NextBio:64382 ArrayExpress:Q8IY37 Bgee:Q8IY37
CleanEx:HS_DHX37 Genevestigator:Q8IY37 GermOnline:ENSG00000150990
Uniprot:Q8IY37
Length = 1157
Score = 279 (103.3 bits), Expect = 4.7e-23, P = 4.7e-23
Identities = 69/208 (33%), Positives = 108/208 (51%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
G R V+ATN+AETS+TI I YVVDCGK K +D +++ + W+S A+A QR GR
Sbjct: 612 GTRLCVVATNVAETSLTIPGIKYVVDCGKVKKRYYDRVTGVSSFRVTWVSQASADQRAGR 671
Query: 89 AGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDEVVRTLESKKF-KMVSRRFKVMLNT 147
AGR + G CY LYS A F+ +P PEI R +++++ +++ K+++ F +
Sbjct: 672 AGRTEPGHCYRLYSSAVFGDFEQFPPPEITRRPVEDLILQMKALNVEKVINFPFPTPPSV 731
Query: 148 AF---TPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIG 204
+ + L PP A L+ RL + T LG +A P+ P+
Sbjct: 732 EALLAAEELLIALGALQPPQKAERVKQLQENRLSCPI------TALGRTMATFPVAPRYA 785
Query: 205 KMLLMASIFSCVDPVFTVAASLGFKDAF 232
KML ++ C+ T+ AS+ ++ F
Sbjct: 786 KMLALSRQHGCLPYAITIVASMTVRELF 813
>UNIPROTKB|G4N1N4 [details] [associations]
symbol:MGG_07501 "ATP-dependent RNA helicase DHX8"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:CM001233 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12813 RefSeq:XP_003711413.1
EnsemblFungi:MGG_07501T0 GeneID:2683421 KEGG:mgr:MGG_07501
Uniprot:G4N1N4
Length = 1016
Score = 278 (102.9 bits), Expect = 4.9e-23, P = 4.9e-23
Identities = 85/231 (36%), Positives = 120/231 (51%)
Query: 12 CPS-SGL-KHLQNKSVFEL---GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVK 66
CP + L LQ+K +FE RK+VLATNIAETS+TID IVYV+D G K + ++
Sbjct: 619 CPIYANLPSELQSK-IFEPTPENARKVVLATNIAETSLTIDGIVYVIDPGYVKENVYNPA 677
Query: 67 DNIATLKPEWISLANAKQRRGRAGRVQEGVCYHLYSR-AREQTFQDYPLPEIQRTRLDEV 125
++ L S A+A QR GRAGRV G C+ LY++ A ++ PEIQRT L+ V
Sbjct: 678 TGMSNLVVVPCSRASANQRSGRAGRVGPGKCFRLYTKYAYMNEMEESTTPEIQRTNLNGV 737
Query: 126 VRTLESKKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDE 185
V L+S +L+ F +DPP ++ +L L + L+
Sbjct: 738 VLQLKSLGINE-------LLDFEF----------MDPPPTEALIGALNQLFALQGLNHKG 780
Query: 186 HLTPLGYHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDA-FYCP 235
LT LG +A+ P DP + K +L A CV+ V ++ A L A F+ P
Sbjct: 781 ELTKLGRQMAEFPTDPMLAKAVLAADKEGCVEEVLSIVAMLSEASALFFRP 831
Score = 120 (47.3 bits), Expect = 0.00065, P = 0.00065
Identities = 29/103 (28%), Positives = 49/103 (47%)
Query: 235 PMIGKMLLMASIFSCVDPVFTVAASLGFKDA-FYCPMNMEKDVDKQKNILAQGAKSDYVV 293
PM+ K +L A CV+ V ++ A L A F+ P + + D + D+V
Sbjct: 796 PMLAKAVLAADKEGCVEEVLSIVAMLSEASALFFRPKDKQVHADAARGRFTVKEGGDHVT 855
Query: 294 LINAMQGWEQALEHNYAHDYCRENFXXXXXXXXXRDMKDQFSR 336
L+N W Q L+ +Y+ + +ENF RD+++Q S+
Sbjct: 856 LLNI---WNQWLDSDYSPIWSKENFLQQRSLTRARDVREQLSK 895
>FB|FBgn0026713 [details] [associations]
symbol:l(1)G0007 "lethal (1) G0007" species:7227 "Drosophila
melanogaster" [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0002121 "inter-male
aggressive behavior" evidence=IMP] [GO:0007476 "imaginal
disc-derived wing morphogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014298 GO:GO:0005681 GO:GO:0003676 GO:GO:0002121
GO:GO:0007476 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GO:GO:0000381 KO:K12815 GeneTree:ENSGT00700000104877 OMA:PSRSTWE
UniGene:Dm.4249 GeneID:32373 KEGG:dme:Dmel_CG32604
FlyBase:FBgn0026713 ChiTaRS:l(1)G0007 GenomeRNAi:32373
NextBio:778160 EMBL:AY058553 RefSeq:NP_572947.1 SMR:Q9VY54
MINT:MINT-334469 STRING:Q9VY54 EnsemblMetazoa:FBtr0073900
UCSC:CG32604-RA InParanoid:Q9VY54 Uniprot:Q9VY54
Length = 1222
Score = 279 (103.3 bits), Expect = 5.1e-23, P = 5.1e-23
Identities = 83/228 (36%), Positives = 115/228 (50%)
Query: 9 FLQCPSSGLKHLQNKSVFELGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDN 68
+ Q PS + KS G+RK V+ATNIAETS+T+D I+YV+D G K+ ++ +
Sbjct: 781 YSQLPSDLQAKIFQKS--SDGLRKCVVATNIAETSLTVDGIIYVIDSGYCKLKVYNPRIG 838
Query: 69 IATLKPEWISLANAKQRRGRAGRVQEGVCYHLYS-RAREQTFQDYPLPEIQRTRLDEVVR 127
+ L+ IS ANA QR GRAGR G Y LY+ R + +PEIQRT L V
Sbjct: 839 MDALQIYPISQANANQRSGRAGRTGPGQAYRLYTQRQYKDELLALTVPEIQRTNLANTVL 898
Query: 128 TLESKKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHL 187
L+S +V +L F +DPP ++ SL L ++ ALD L
Sbjct: 899 LLKS--LGVVD-----LLQFHF----------MDPPPQDNILNSLYQLWILGALDHTGAL 941
Query: 188 TPLGYHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCP 235
T LG +A+ PLDP +ML++A C V + + L FY P
Sbjct: 942 TTLGRQMAEFPLDPPQCQMLIVACRMGCSAEVLIIVSMLSVPSIFYRP 989
>SGD|S000000815 [details] [associations]
symbol:PRP22 "DEAH-box RNA-dependent ATPase/ATP-dependent RNA
helicase" species:4932 "Saccharomyces cerevisiae" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IMP] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000350 "generation of catalytic spliceosome for second
transesterification step" evidence=IDA;IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000386 "second spliceosomal transesterification
activity" evidence=IMP;IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000390 "spliceosomal complex disassembly"
evidence=IMP] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0071021 "U2-type post-spliceosomal complex"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 SGD:S000000815 GO:GO:0005524 KO:K01897
GO:GO:0003723 EMBL:BK006939 EMBL:U18778 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 HOGENOM:HOG000175261 GO:GO:0071007 InterPro:IPR022967
SMART:SM00316 GO:GO:0000390 GeneTree:ENSGT00700000104241 KO:K12818
GO:GO:0000350 RefSeq:NP_010931.3 GeneID:856734 KEGG:sce:YER015W
OrthoDB:EOG45TGW9 EMBL:X58681 PIR:S13643 RefSeq:NP_010929.3
ProteinModelPortal:P24384 SMR:P24384 DIP:DIP-655N IntAct:P24384
MINT:MINT-648209 STRING:P24384 PaxDb:P24384 EnsemblFungi:YER013W
GeneID:856732 KEGG:sce:YER013W CYGD:YER013w OMA:QITQYLD
NextBio:982846 Genevestigator:P24384 GermOnline:YER013W
GO:GO:0071021 Uniprot:P24384
Length = 1145
Score = 278 (102.9 bits), Expect = 5.9e-23, P = 5.9e-23
Identities = 79/220 (35%), Positives = 113/220 (51%)
Query: 20 LQNKSVFE---LGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEW 76
+Q+K +FE G RK+V ATNIAETSITID I YVVD G K++ ++ + I L
Sbjct: 738 IQSK-IFEPTPKGSRKVVFATNIAETSITIDGIYYVVDPGFAKINIYNARAGIEQLIVSP 796
Query: 77 ISLANAKQRRGRAGRVQEGVCYHLYSR-AREQTFQDYPLPEIQRTRLDEVVRTLESKKFK 135
IS A A QR+GRAGR G CY LY+ A + +PEIQR L + L++
Sbjct: 797 ISQAQANQRKGRAGRTGPGKCYRLYTESAFYNEMLENTVPEIQRQNLSHTILMLKAMGIN 856
Query: 136 MVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLA 195
+ + F M DPP + +L L + +LDD+ LT LG ++
Sbjct: 857 DLLK-FDFM----------------DPPPKNLMLNALTELYHLQSLDDEGKLTNLGKEMS 899
Query: 196 KLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCP 235
P+DP + + LL + C D + T+ + L ++ FY P
Sbjct: 900 LFPMDPTLSRSLLSSVDNQCSDEIVTIISMLSVQNVFYRP 939
Score = 133 (51.9 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 29/101 (28%), Positives = 48/101 (47%)
Query: 235 PMIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQGAKSDYVVL 294
P + + LL + C D + T+ + L ++ FY P + + + D +K D++ L
Sbjct: 905 PTLSRSLLSSVDNQCSDEIVTIISMLSVQNVFYRPKDRQLEADSKKAKFHH-PYGDHLTL 963
Query: 295 INAMQGWEQALEHNYAHDYCRENFXXXXXXXXXRDMKDQFS 335
+N W+QA NY+ YC+ NF RD+K Q S
Sbjct: 964 LNVYTRWQQA---NYSEQYCKTNFLHFRHLKRARDVKSQIS 1001
>UNIPROTKB|E2RC56 [details] [associations]
symbol:DHX38 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 KO:K12815 OMA:PSRSTWE CTD:9785
EMBL:AAEX03004090 RefSeq:XP_536800.2 ProteinModelPortal:E2RC56
Ensembl:ENSCAFT00000032225 GeneID:479669 KEGG:cfa:479669
NextBio:20854813 Uniprot:E2RC56
Length = 1226
Score = 278 (102.9 bits), Expect = 6.5e-23, P = 6.5e-23
Identities = 74/208 (35%), Positives = 110/208 (52%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
GVRK ++ATNIAETS+T+D I++V+D G K+ F+ + + L+ IS ANA QR GR
Sbjct: 796 GVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGR 855
Query: 89 AGRVQEGVCYHLYSR-AREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNT 147
AGR G C+ LY++ A + +PEIQRT L VV L+S + +L
Sbjct: 856 AGRTGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQD-------LLQF 908
Query: 148 AFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKML 207
F +DPP ++ S+ L ++ ALD+ LT G + + PLDP + KML
Sbjct: 909 HF----------MDPPPEDNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKML 958
Query: 208 LMASIFSCVDPVFTVAASLGFKDAFYCP 235
+++ C + + + L FY P
Sbjct: 959 IVSCDMGCSSEILLIVSMLSVPAIFYRP 986
>UNIPROTKB|Q17R09 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9913 "Bos taurus" [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0005681 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428 KO:K12815
EMBL:BC118085 IPI:IPI00690755 RefSeq:NP_001069266.1
UniGene:Bt.42896 ProteinModelPortal:Q17R09 STRING:Q17R09
PRIDE:Q17R09 GeneID:520046 KEGG:bta:520046 CTD:9785
NextBio:20873012 Uniprot:Q17R09
Length = 1227
Score = 278 (102.9 bits), Expect = 6.5e-23, P = 6.5e-23
Identities = 74/208 (35%), Positives = 110/208 (52%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
GVRK ++ATNIAETS+T+D I++V+D G K+ F+ + + L+ IS ANA QR GR
Sbjct: 797 GVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGR 856
Query: 89 AGRVQEGVCYHLYSR-AREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNT 147
AGR G C+ LY++ A + +PEIQRT L VV L+S + +L
Sbjct: 857 AGRTGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQD-------LLQF 909
Query: 148 AFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKML 207
F +DPP ++ S+ L ++ ALD+ LT G + + PLDP + KML
Sbjct: 910 HF----------MDPPPEDNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKML 959
Query: 208 LMASIFSCVDPVFTVAASLGFKDAFYCP 235
+++ C + + + L FY P
Sbjct: 960 IVSCDMGCSSEILLIVSMLSVPAIFYRP 987
>UNIPROTKB|Q92620 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9606 "Homo sapiens" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;IDA;TAS]
[GO:0005634 "nucleus" evidence=NAS] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=TAS] [GO:0006406 "mRNA export from nucleus"
evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0031124 "mRNA 3'-end
processing" evidence=TAS] Reactome:REACT_71 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AC004682
GO:GO:0005524 GO:GO:0005654 Reactome:REACT_1675 GO:GO:0003676
GO:GO:0006406 GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:CH471166 Reactome:REACT_1788
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0006369 GO:GO:0031124 Reactome:REACT_78
HOVERGEN:HBG039428 KO:K12815 OMA:PSRSTWE CTD:9785 EMBL:AF038391
EMBL:D86977 EMBL:BC004235 EMBL:BC008340 IPI:IPI00294211
RefSeq:NP_054722.2 UniGene:Hs.151218 ProteinModelPortal:Q92620
SMR:Q92620 IntAct:Q92620 STRING:Q92620 PhosphoSite:Q92620
DMDM:85700389 PaxDb:Q92620 PeptideAtlas:Q92620 PRIDE:Q92620
DNASU:9785 Ensembl:ENST00000268482 GeneID:9785 KEGG:hsa:9785
UCSC:uc002fcb.3 GeneCards:GC16P072127 HGNC:HGNC:17211 HPA:HPA041347
MIM:605584 neXtProt:NX_Q92620 PharmGKB:PA27225 InParanoid:Q92620
OrthoDB:EOG4Z62MS PhylomeDB:Q92620 ChiTaRS:DHX38 GenomeRNAi:9785
NextBio:36846 ArrayExpress:Q92620 Bgee:Q92620 CleanEx:HS_DHX38
Genevestigator:Q92620 GermOnline:ENSG00000140829 Uniprot:Q92620
Length = 1227
Score = 278 (102.9 bits), Expect = 6.5e-23, P = 6.5e-23
Identities = 74/208 (35%), Positives = 110/208 (52%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
GVRK ++ATNIAETS+T+D I++V+D G K+ F+ + + L+ IS ANA QR GR
Sbjct: 797 GVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGR 856
Query: 89 AGRVQEGVCYHLYSR-AREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNT 147
AGR G C+ LY++ A + +PEIQRT L VV L+S + +L
Sbjct: 857 AGRTGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQD-------LLQF 909
Query: 148 AFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKML 207
F +DPP ++ S+ L ++ ALD+ LT G + + PLDP + KML
Sbjct: 910 HF----------MDPPPEDNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKML 959
Query: 208 LMASIFSCVDPVFTVAASLGFKDAFYCP 235
+++ C + + + L FY P
Sbjct: 960 IVSCDMGCSSEILLIVSMLSVPAIFYRP 987
>RGD|1310345 [details] [associations]
symbol:Dhx38 "DEAH (Asp-Glu-Ala-His) box polypeptide 38"
species:10116 "Rattus norvegicus" [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA;ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:1310345
GO:GO:0005524 GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00700000104421 OrthoDB:EOG4Z62MS
IPI:IPI00371467 PRIDE:D4A321 Ensembl:ENSRNOT00000019810
UCSC:RGD:1310345 Uniprot:D4A321
Length = 1228
Score = 278 (102.9 bits), Expect = 6.5e-23, P = 6.5e-23
Identities = 74/208 (35%), Positives = 110/208 (52%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
GVRK ++ATNIAETS+T+D I++V+D G K+ F+ + + L+ IS ANA QR GR
Sbjct: 798 GVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGR 857
Query: 89 AGRVQEGVCYHLYSR-AREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNT 147
AGR G C+ LY++ A + +PEIQRT L VV L+S + +L
Sbjct: 858 AGRTGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQD-------LLQF 910
Query: 148 AFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKML 207
F +DPP ++ S+ L ++ ALD+ LT G + + PLDP + KML
Sbjct: 911 HF----------MDPPPEDNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKML 960
Query: 208 LMASIFSCVDPVFTVAASLGFKDAFYCP 235
+++ C + + + L FY P
Sbjct: 961 IVSCDMGCSSEILLIVSMLSVPAIFYRP 988
>WB|WBGene00022056 [details] [associations]
symbol:Y67D2.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GeneTree:ENSGT00700000104241 EMBL:FO081642 RefSeq:NP_497420.1
ProteinModelPortal:Q9BKQ8 SMR:Q9BKQ8 MINT:MINT-1068531
STRING:Q9BKQ8 PaxDb:Q9BKQ8 EnsemblMetazoa:Y67D2.6 GeneID:175308
KEGG:cel:CELE_Y67D2.6 UCSC:Y67D2.6 CTD:175308 WormBase:Y67D2.6
InParanoid:Q9BKQ8 KO:K13117 OMA:NIFVVPP NextBio:887600
Uniprot:Q9BKQ8
Length = 732
Score = 274 (101.5 bits), Expect = 7.3e-23, P = 7.3e-23
Identities = 75/233 (32%), Positives = 119/233 (51%)
Query: 6 QIWFLQCPSSGLKHLQNKSVFEL---GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSN 62
++W + C + L + F+ G RK+V+ATNIAE SITI I YV+D G K+
Sbjct: 328 RLWVVPCYGA-LPAREQMKAFDSTPHGTRKVVVATNIAEASITIPGICYVIDTGYVKLRA 386
Query: 63 FDVKDNIATLKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRL 122
+ + TL +S A+A+QR GRAGR++ G CY LY + + F + +PEIQR ++
Sbjct: 387 QHAANGVETLMRVTVSKASAEQRAGRAGRIRPGKCYRLYPESEFERFAEGTVPEIQRCQM 446
Query: 123 DEVVRTLESKKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALD 182
+ L++ + V RF + P W +++ ++L L L ID +
Sbjct: 447 ASTILQLKALGVQNV-HRFHYLS----PPPSWA---MIN-----GLEL-LYALGAID--E 490
Query: 183 DDEHLTPLGYHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCP 235
+ +PLG +A+ PL P K LL ++ F C + T+ A + +D F P
Sbjct: 491 TSQLTSPLGLQMAEFPLPPMHSKCLLKSAEFGCSTEMVTIVAMMQIQDVFITP 543
>UNIPROTKB|F1S9V4 [details] [associations]
symbol:TDRD9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071547 "piP-body" evidence=IEA] [GO:0043046 "DNA
methylation involved in gamete generation" evidence=IEA]
[GO:0034587 "piRNA metabolic process" evidence=IEA] [GO:0009566
"fertilization" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0007140 "male meiosis" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
InterPro:IPR002999 GO:GO:0005524 GO:GO:0005634 GO:GO:0009566
GO:GO:0007283 GO:GO:0003676 GO:GO:0007140 Pfam:PF00567
SMART:SM00333 PROSITE:PS50304 GO:GO:0043046 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0034587
GeneTree:ENSGT00700000104393 GO:GO:0008026 GO:GO:0071547
OMA:INDWFTI EMBL:CU693433 Ensembl:ENSSSCT00000002836
ArrayExpress:F1S9V4 Uniprot:F1S9V4
Length = 1333
Score = 278 (102.9 bits), Expect = 7.3e-23, P = 7.3e-23
Identities = 77/219 (35%), Positives = 116/219 (52%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRR-G 87
G RK++L+TNIAE+S+T+ D+ YV+D T+ D N +L+ W S + QR+ G
Sbjct: 444 GYRKVILSTNIAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCNQRKEG 503
Query: 88 RAGRVQEGVCYHLYSRAREQT-FQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLN 146
RAGRV +G CY L + T D+ +PE+ R L + L+ K M R +L
Sbjct: 504 RAGRVSKGYCYRLVPKDFWDTSIPDHVIPEMLRCPLGSTI--LKLKLLDMGEPR--ALLA 559
Query: 147 TAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALD-----DDEH-----LTPLGYHLAK 196
TA L PP ++ ++ LL+ + AL DDE+ LT LG LA
Sbjct: 560 TA-----------LSPPSLGDIERTILLLKEVGALAVRGPRDDENPHDGELTFLGRVLAH 608
Query: 197 LPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCP 235
LP++ Q+GK++++ +F C+D +AASL K+ F P
Sbjct: 609 LPVNQQLGKLIVLGHVFGCLDECLIIAASLSLKNFFAMP 647
>UNIPROTKB|F1NWM3 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:AADN02025787
IPI:IPI00583149 Ensembl:ENSGALT00000008234 Uniprot:F1NWM3
Length = 730
Score = 272 (100.8 bits), Expect = 1.2e-22, P = 1.2e-22
Identities = 80/221 (36%), Positives = 111/221 (50%)
Query: 21 QNKSVF---ELGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWI 77
Q K +F G+RK V++TNIA TS+TI+ + YVVD G K N + + + L+ I
Sbjct: 275 QQKRIFLPAPKGIRKCVVSTNIAATSLTIEGVRYVVDSGFVKQLNHNPRVGLDILEVVPI 334
Query: 78 SLANAKQRRGRAGRVQEGVCYHLYSRAR-EQTFQDYPLPEIQRTRLDEVVRTLESKKFKM 136
S + A QR GRAGR G Y LYS EQ D+ +PEI+RT L V+ TL+
Sbjct: 335 SKSEAMQRAGRAGRTSSGKSYRLYSTEFWEQCMPDHTVPEIKRTSLTSVILTLKCLSVHD 394
Query: 137 VSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDE--HLTPLGYHL 194
V R F PY LD P+ + +LK L DA+D H+T LG L
Sbjct: 395 VIR---------F-PY-------LDRPEERHILEALKQLYQCDAIDRTRRGHVTRLGEFL 437
Query: 195 AKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCP 235
+ PL P + ++ A+ C D + +AA L ++ F P
Sbjct: 438 VQFPLPPNLSCAVIKAASLDCEDMLLPIAAMLSVENVFIRP 478
>FB|FBgn0031631 [details] [associations]
symbol:CG3225 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:AE014134 GO:GO:0006200
GO:GO:0003676 GO:GO:0004386 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GO:GO:0016779 GeneTree:ENSGT00700000104241 KO:K13117 OMA:NIFVVPP
EMBL:AY069418 RefSeq:NP_608860.1 UniGene:Dm.300 SMR:Q9VR29
DIP:DIP-18193N IntAct:Q9VR29 MINT:MINT-288733
EnsemblMetazoa:FBtr0077416 GeneID:33680 KEGG:dme:Dmel_CG3225
UCSC:CG3225-RA FlyBase:FBgn0031631 InParanoid:Q9VR29
OrthoDB:EOG4H189P GenomeRNAi:33680 NextBio:784751 Uniprot:Q9VR29
Length = 678
Score = 269 (99.8 bits), Expect = 2.2e-22, P = 2.2e-22
Identities = 73/208 (35%), Positives = 111/208 (53%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
G RK+VLATNIAETSITI IVYV+DCG K+ ++ K +L +S A+A QR GR
Sbjct: 317 GTRKVVLATNIAETSITIPGIVYVIDCGYVKVKWYNPKTCSDSLVIVPVSKASAIQRAGR 376
Query: 89 AGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNTA 148
AGR++ G Y LY+++ + PE++R+ L + L++ + R F
Sbjct: 377 AGRMRPGKVYRLYTKSDYEALAPRQPPEMRRSELSGAILQLKALGIGNILR-FDF----- 430
Query: 149 FTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLT-PLGYHLAKLPLDPQIGKML 207
P PP ++ +L+ L +DA+D+ +LT P+GY LA+LP + KML
Sbjct: 431 -------PS----PPPAQNLLSALESLFALDAIDEQGNLTKPVGYLLAELPFSAMLSKML 479
Query: 208 LMASIFSCVDPVFTVAASLGFKDAFYCP 235
++ C + + T+ A L + F P
Sbjct: 480 YVSGQMGCSEEIITIIALLQVQSIFSRP 507
>GENEDB_PFALCIPARUM|MAL13P1.322 [details] [associations]
symbol:MAL13P1.322 "splicing factor,
putative" species:5833 "Plasmodium falciparum" [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
EMBL:AL844509 HOGENOM:HOG000175261 KO:K12815 RefSeq:XP_002809102.1
ProteinModelPortal:C0H5K5 EnsemblProtists:MAL13P1.322:mRNA
GeneID:813888 KEGG:pfa:MAL13P1.322 EuPathDB:PlasmoDB:PF3D7_1364300
OMA:YFHNAAK ProtClustDB:CLSZ2500787 Uniprot:C0H5K5
Length = 1151
Score = 271 (100.5 bits), Expect = 3.3e-22, P = 3.3e-22
Identities = 76/223 (34%), Positives = 116/223 (52%)
Query: 15 SGLKHLQNKSVFE-LGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLK 73
S L Q +F+ +RKI+++TNIAETS+T+D I YV+D G K+ ++ + L+
Sbjct: 779 SQLSSEQQSKIFKKYDLRKIIVSTNIAETSLTLDGIKYVIDTGYCKLKVYNQTIGMDVLQ 838
Query: 74 PEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQ-D-YP--LPEIQRTRLDEVVRTL 129
IS ANA QR GRAGR G+CY LY+ E TF D Y +PEIQR+ L VV L
Sbjct: 839 VTPISQANANQRSGRAGRTGAGICYRLYT---ENTFLCDLYQNNIPEIQRSNLSNVVLLL 895
Query: 130 ESKKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTP 189
+S V F+ +D P S+ SL L ++ A++++ +LT
Sbjct: 896 KSLH---VQNLFEF--------------DFIDVPSKESIINSLHELWVLGAINNEGNLTD 938
Query: 190 LGYHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAF 232
+G + + PLDP + K+++ + F C + + + L F
Sbjct: 939 IGRKMVQFPLDPPLSKIVIYSQNFQCTKEILIIVSMLSSPSIF 981
>UNIPROTKB|C0H5K5 [details] [associations]
symbol:MAL13P1.322 "Splicing factor, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
EMBL:AL844509 HOGENOM:HOG000175261 KO:K12815 RefSeq:XP_002809102.1
ProteinModelPortal:C0H5K5 EnsemblProtists:MAL13P1.322:mRNA
GeneID:813888 KEGG:pfa:MAL13P1.322 EuPathDB:PlasmoDB:PF3D7_1364300
OMA:YFHNAAK ProtClustDB:CLSZ2500787 Uniprot:C0H5K5
Length = 1151
Score = 271 (100.5 bits), Expect = 3.3e-22, P = 3.3e-22
Identities = 76/223 (34%), Positives = 116/223 (52%)
Query: 15 SGLKHLQNKSVFE-LGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLK 73
S L Q +F+ +RKI+++TNIAETS+T+D I YV+D G K+ ++ + L+
Sbjct: 779 SQLSSEQQSKIFKKYDLRKIIVSTNIAETSLTLDGIKYVIDTGYCKLKVYNQTIGMDVLQ 838
Query: 74 PEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQ-D-YP--LPEIQRTRLDEVVRTL 129
IS ANA QR GRAGR G+CY LY+ E TF D Y +PEIQR+ L VV L
Sbjct: 839 VTPISQANANQRSGRAGRTGAGICYRLYT---ENTFLCDLYQNNIPEIQRSNLSNVVLLL 895
Query: 130 ESKKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTP 189
+S V F+ +D P S+ SL L ++ A++++ +LT
Sbjct: 896 KSLH---VQNLFEF--------------DFIDVPSKESIINSLHELWVLGAINNEGNLTD 938
Query: 190 LGYHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAF 232
+G + + PLDP + K+++ + F C + + + L F
Sbjct: 939 IGRKMVQFPLDPPLSKIVIYSQNFQCTKEILIIVSMLSSPSIF 981
>ZFIN|ZDB-GENE-070410-11 [details] [associations]
symbol:zgc:158828 "zgc:158828" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-070410-11
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HOVERGEN:HBG039428 OrthoDB:EOG4V9TQ5
EMBL:BC117646 IPI:IPI00851766 UniGene:Dr.86097 Uniprot:Q1ECW4
Length = 691
Score = 267 (99.0 bits), Expect = 3.7e-22, P = 3.7e-22
Identities = 76/224 (33%), Positives = 114/224 (50%)
Query: 15 SGLKHLQNKSVFEL---GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIAT 71
+GL + + VFE VRK+V+ATNIAETSITI+ +V+V+DC K+ ++ + I +
Sbjct: 307 AGLPYNEQMRVFERMAPTVRKVVVATNIAETSITINGVVFVIDCAFVKIRAYNPRTAIES 366
Query: 72 LKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDEVVRTLES 131
L IS A+A QR GRAGR + G C+ LY+ + + +PE+QR+ L V+ L++
Sbjct: 367 LIVTPISKASACQRAGRAGRNRAGKCFRLYTEEDFEKLPESTVPEMQRSNLAPVILQLKA 426
Query: 132 KKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLG 191
V R F + +P PP + VQ L L P+G
Sbjct: 427 LGIDNVLR-FSFL-----SP----------PPAQSMVQALELLFALGGLDQYGRLTDPMG 470
Query: 192 YHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCP 235
+A+ PL P KMLL + F C + T+AA + ++ F P
Sbjct: 471 VRMAEFPLSPMFAKMLLESGNFGCSKEIVTIAAMMQIQNIFVAP 514
>POMBASE|SPAC2G11.11c [details] [associations]
symbol:prh1 "ATP-dependent RNA helicase Prh1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005730 "nucleolus" evidence=ISO;IDA] [GO:0042254 "ribosome
biogenesis" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
PomBase:SPAC2G11.11c GO:GO:0005524 EMBL:CU329670 GO:GO:0005730
GenomeReviews:CU329670_GR GO:GO:0006397 GO:GO:0042254 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
KO:K14781 OrthoDB:EOG4F7RTB EMBL:D13249 PIR:S35546 PIR:S62466
RefSeq:NP_593091.1 ProteinModelPortal:Q03319
EnsemblFungi:SPAC2G11.11c.1 GeneID:2541750 KEGG:spo:SPAC2G11.11c
OMA:MANDTTI NextBio:20802841 Uniprot:Q03319
Length = 719
Score = 208 (78.3 bits), Expect = 4.2e-22, Sum P(2) = 4.2e-22
Identities = 51/125 (40%), Positives = 71/125 (56%)
Query: 12 CPS-SGLKHLQNKSVFELGV---RKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKD 67
CP + L Q VF + RK+VL+TNIAETS+TI I YV+D G K+ F+ K
Sbjct: 341 CPLFASLPQEQQLQVFLPALANHRKVVLSTNIAETSVTISGIRYVIDTGLAKIKQFNSKL 400
Query: 68 NIATLKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDEVVR 127
+ +L + IS + A QR GRAGR G CY +Y+ A +PEI+R L + V
Sbjct: 401 GLESLTVQPISQSAAMQRSGRAGREAAGQCYRIYTEADFDKLPKETIPEIKRIDLSQAVL 460
Query: 128 TLESK 132
TL+++
Sbjct: 461 TLKAR 465
Score = 118 (46.6 bits), Expect = 4.2e-22, Sum P(2) = 4.2e-22
Identities = 25/76 (32%), Positives = 40/76 (52%)
Query: 160 LDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKMLLMASIFSCVDPV 219
+DPP + +L+ L I ALDD+ H+ LGY ++ +PL P + + +L A +C+ V
Sbjct: 476 MDPPSKEGLLRALEHLYSIGALDDNGHINDLGYQMSLIPLLPSLARAVLAAREHNCLSEV 535
Query: 220 FTVAASLGFKDAFYCP 235
V + L F P
Sbjct: 536 IDVVSCLSTDSMFLFP 551
Score = 73 (30.8 bits), Expect = 2.1e-17, Sum P(2) = 2.1e-17
Identities = 19/99 (19%), Positives = 43/99 (43%)
Query: 235 PMIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQGAKSDYVVL 294
P + + +L A +C+ V V + L F P ++D + + ++ D +
Sbjct: 517 PSLARAVLAAREHNCLSEVIDVVSCLSTDSMFLFPQE-KRDEAIEARLKFLHSEGDLLTC 575
Query: 295 INAMQGWEQALEHNYAHDYCRENFXXXXXXXXXRDMKDQ 333
+NA++ + ++ H+ +C +NF D++ Q
Sbjct: 576 LNALRQYLES-SHDSRKQWCSQNFINRRALKTILDIRKQ 613
>UNIPROTKB|E1C9C2 [details] [associations]
symbol:DHX37 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 OMA:AKLQPRT EMBL:AADN02034854
IPI:IPI00601367 Ensembl:ENSGALT00000004688 Uniprot:E1C9C2
Length = 1145
Score = 270 (100.1 bits), Expect = 4.2e-22, P = 4.2e-22
Identities = 68/212 (32%), Positives = 112/212 (52%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
G R V+ATN+AETS+TI I YVVDCGK K +D +++ + WIS A+A QR GR
Sbjct: 601 GTRLCVVATNVAETSLTIPGIKYVVDCGKVKKRFYDKITGVSSFRVTWISQASANQRAGR 660
Query: 89 AGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNTA 148
AGR + G CY LYS A F+ + PEI + +++++ +++ + V +N
Sbjct: 661 AGRTEPGHCYRLYSSAVFMDFEKFSAPEITKRPVEDLILQMKALNIEKV-------INFP 713
Query: 149 F-TPYVWVPKQVLDPPDPASVQL-SLKLLRLIDALDDDEH------LTPLGYHLAKLPLD 200
F TP P + L + + L +LK + L + + ++PLG +A P+
Sbjct: 714 FPTP---PPTEALAAAEELLIALGALKEPPMTGRLKEQQAAKLSCPISPLGRVMATFPVA 770
Query: 201 PQIGKMLLMASIFSCVDPVFTVAASLGFKDAF 232
P+ KML ++ C+ T+ +++ ++ F
Sbjct: 771 PRYAKMLALSRQHDCLPYTITIVSAMTVRELF 802
>UNIPROTKB|E2RHZ3 [details] [associations]
symbol:DHX37 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 KO:K14780 CTD:57647 OMA:AKLQPRT
EMBL:AAEX03014623 RefSeq:XP_534640.2 Ensembl:ENSCAFT00000011159
GeneID:477442 KEGG:cfa:477442 NextBio:20852918 Uniprot:E2RHZ3
Length = 1149
Score = 269 (99.8 bits), Expect = 5.4e-22, P = 5.4e-22
Identities = 62/204 (30%), Positives = 106/204 (51%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
G R V+ATN+AETS+TI I YVVDCGK K ++D +++ + W+S A+A QR GR
Sbjct: 606 GTRLCVVATNVAETSLTIPGIKYVVDCGKVKKRHYDRVTGVSSFRVTWVSQASADQRAGR 665
Query: 89 AGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNTA 148
AGR + G CY LYS A F+ +P PEI R +++++ +++ + V F +
Sbjct: 666 AGRTEPGHCYRLYSSAVFSDFEQFPPPEITRRPVEDLILQMKALNIEKVIN-FPFPTPPS 724
Query: 149 FTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKMLL 208
+ +++L + ++ + +T LG +A P+ P+ KML
Sbjct: 725 VEALI-AAEELLIALGALQAPQKTESVKQLQRSWLGCPITALGRTMATFPVAPRYAKMLA 783
Query: 209 MASIFSCVDPVFTVAASLGFKDAF 232
++ C+ T+ A++ ++ F
Sbjct: 784 LSRQHGCLPYAITIVAAMTVRELF 807
>UNIPROTKB|P43329 [details] [associations]
symbol:hrpA species:83333 "Escherichia coli K-12"
[GO:0004386 "helicase activity" evidence=IEA;IMP] [GO:0009451 "RNA
modification" evidence=IMP] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0006397 "mRNA processing"
evidence=IMP] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006397 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:D42105
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GO:GO:0009451 PIR:H64892 RefSeq:NP_415931.4 RefSeq:YP_489680.1
ProteinModelPortal:P43329 SMR:P43329 DIP:DIP-9937N IntAct:P43329
MINT:MINT-1229564 PRIDE:P43329 EnsemblBacteria:EBESCT00000000014
EnsemblBacteria:EBESCT00000015011 GeneID:12932513 GeneID:948444
KEGG:ecj:Y75_p1389 KEGG:eco:b1413 PATRIC:32118112 EchoBASE:EB2772
EcoGene:EG12936 HOGENOM:HOG000247272 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 BioCyc:EcoCyc:G6732-MONOMER
BioCyc:ECOL316407:JW5905-MONOMER Genevestigator:P43329
InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967 Uniprot:P43329
Length = 1300
Score = 269 (99.8 bits), Expect = 6.5e-22, P = 6.5e-22
Identities = 75/217 (34%), Positives = 114/217 (52%)
Query: 21 QNKSVFEL-GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISL 79
QN+ VF+ R+IVLATN+AETS+T+ I YV+D G ++S + + + L E IS
Sbjct: 332 QNR-VFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQ 390
Query: 80 ANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSR 139
A+A QR+GR GRV EG+C LYS + ++ PEI RT L V+ + + ++
Sbjct: 391 ASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIA- 449
Query: 140 RFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPL 199
AF P+V P + + D + L + D LTPLG L++LP+
Sbjct: 450 --------AF-PFVEAPDK-RNIQDGVRLLEELGAITT-DEQASAYKLTPLGRQLSQLPV 498
Query: 200 DPQIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPM 236
DP++ +M+L A CV + ++L +D PM
Sbjct: 499 DPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPM 535
>UNIPROTKB|G4MKC3 [details] [associations]
symbol:MGG_02518 "ATP-dependent RNA helicase DHX8"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:CM001231 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K13117 RefSeq:XP_003709326.1 EnsemblFungi:MGG_02518T0
GeneID:2681615 KEGG:mgr:MGG_02518 Uniprot:G4MKC3
Length = 671
Score = 264 (98.0 bits), Expect = 7.3e-22, P = 7.3e-22
Identities = 76/213 (35%), Positives = 110/213 (51%)
Query: 15 SGLKHLQNKSVFE---LGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIAT 71
SGL Q +FE RK++ +TNIAE S+TI IVYVVD G K+ ++ K I T
Sbjct: 287 SGLSTEQQMYIFEEAPANTRKVIFSTNIAEASVTISGIVYVVDSGFVKLRAYNPKTGIET 346
Query: 72 LKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDEVVRTLES 131
L IS A A QR GRAGR + G C+ LY+ + D +PE+QR+ L + L++
Sbjct: 347 LTAVPISKAAAAQRAGRAGRTKPGKCFRLYTEESYTSLSDTNIPEVQRSNLAPFILQLKA 406
Query: 132 KKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLG 191
V F + TP P +++ +++L L L +D D + PLG
Sbjct: 407 LGIDNVLH-FDFL-----TP---PPAELMTK----ALEL-LYSLGALD--DYAKLTKPLG 450
Query: 192 YHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAA 224
+A+L +DP + K LL A F C+ + T+AA
Sbjct: 451 LRMAELAVDPMMAKTLLSAESFGCLSEMLTIAA 483
>TAIR|locus:2197965 [details] [associations]
symbol:AT1G26370 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
IPI:IPI00532541 RefSeq:NP_173961.3 UniGene:At.15978
ProteinModelPortal:F4IE66 SMR:F4IE66 PRIDE:F4IE66
EnsemblPlants:AT1G26370.1 GeneID:839179 KEGG:ath:AT1G26370
OMA:ADISTNI Uniprot:F4IE66
Length = 717
Score = 263 (97.6 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 74/225 (32%), Positives = 108/225 (48%)
Query: 15 SGLKHLQNKSVFE---LGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIAT 71
S L Q VF G RK++LATNIAETSITI I YV+D G K ++D + +
Sbjct: 332 SALPSEQQMKVFAPAPTGFRKVILATNIAETSITIPGIRYVIDPGFVKARSYDPSKGMES 391
Query: 72 LKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDEVVRTLES 131
L S A QR GRAGR G + LY + +D PEI+R L ++ L++
Sbjct: 392 LDVVPASKAQTLQRSGRAGREGPGKSFRLYPEREFEKLEDSTKPEIKRCNLSNIILQLKA 451
Query: 132 KKFKMVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHL-TPL 190
+ V +D P ++ +L L + AL DD L P+
Sbjct: 452 LGIDDI-----------------VGFDFIDKPSRGAIIKALAELHSLGALADDGKLENPV 494
Query: 191 GYHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCP 235
GY +++LPL+P K L++A+ F+C++ + A L + FY P
Sbjct: 495 GYQMSRLPLEPVYSKALILANQFNCLEEMLITVAVLSVESIFYDP 539
>GENEDB_PFALCIPARUM|PFL1525c [details] [associations]
symbol:PFL1525c "pre-mRNA splicing factor RNA
helicase, putative" species:5833 "Plasmodium falciparum"
[GO:0051726 "regulation of cell cycle" evidence=ISS] [GO:0008380
"RNA splicing" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008380 GO:GO:0005681
GO:GO:0003676 GO:GO:0051726 EMBL:AE014188 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509 RefSeq:XP_001350711.1
ProteinModelPortal:Q8I5A4 IntAct:Q8I5A4 MINT:MINT-1581184
PRIDE:Q8I5A4 EnsemblProtists:PFL1525c:mRNA GeneID:811357
KEGG:pfa:PFL1525c EuPathDB:PlasmoDB:PF3D7_1231600
ProtClustDB:CLSZ2514931 Uniprot:Q8I5A4
Length = 1168
Score = 204 (76.9 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 43/101 (42%), Positives = 62/101 (61%)
Query: 31 RKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAG 90
RKI+L+TNI ETSITID+IVYV+D G K ++ I +L S A+ QR GRAG
Sbjct: 803 RKIILSTNICETSITIDNIVYVIDSGLCKQKIYNPNSGIESLVTLPCSKASVNQRTGRAG 862
Query: 91 RVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDEVVRTLES 131
R ++G C+ L+++ D +PEIQR + ++ L+S
Sbjct: 863 RKRDGKCFRLFTKKSFIDLSDNSIPEIQRCEISSMILLLKS 903
Score = 124 (48.7 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 29/81 (35%), Positives = 46/81 (56%)
Query: 160 LDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKMLLMASI-FSCVDP 218
LDPP P + L+LL + AL+D+ +LT G +A+ P D + KM+L A+ ++CVD
Sbjct: 915 LDPPSPIVIIKGLELLYSLGALNDEGNLTRTGRKMAEFPTDVKSSKMILSAAEKYNCVDE 974
Query: 219 VFTVAASLGFKDAFYCPMIGK 239
+ VA+ L + + GK
Sbjct: 975 ILNVASMLTHANNIFYVQKGK 995
Score = 104 (41.7 bits), Expect = 1.5e-19, Sum P(2) = 1.5e-19
Identities = 25/97 (25%), Positives = 49/97 (50%)
Query: 239 KMLLMASI-FSCVDPVFTVAASLGF-KDAFYCPMNMEKDVDKQKNILAQGAKSDYVVLIN 296
KM+L A+ ++CVD + VA+ L + FY EK+ + K + D+++ +N
Sbjct: 960 KMILSAAEKYNCVDEILNVASMLTHANNIFYVQKGKEKEAENIKKMFIIEGGGDFLLFLN 1019
Query: 297 AMQGWEQALEHNYAHDYCRENFXXXXXXXXXRDMKDQ 333
++Q E+N++ +C ++F +D+K Q
Sbjct: 1020 I---YKQCEENNFSTSFCYDHFLQYHTLIKVKDVKTQ 1053
>UNIPROTKB|Q8I5A4 [details] [associations]
symbol:PFL1525c "Pre-mRNA splicing factor RNA helicase,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0008380 "RNA splicing"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0008380 GO:GO:0005681 GO:GO:0003676
GO:GO:0051726 EMBL:AE014188 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 KO:K01509 RefSeq:XP_001350711.1
ProteinModelPortal:Q8I5A4 IntAct:Q8I5A4 MINT:MINT-1581184
PRIDE:Q8I5A4 EnsemblProtists:PFL1525c:mRNA GeneID:811357
KEGG:pfa:PFL1525c EuPathDB:PlasmoDB:PF3D7_1231600
ProtClustDB:CLSZ2514931 Uniprot:Q8I5A4
Length = 1168
Score = 204 (76.9 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 43/101 (42%), Positives = 62/101 (61%)
Query: 31 RKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAG 90
RKI+L+TNI ETSITID+IVYV+D G K ++ I +L S A+ QR GRAG
Sbjct: 803 RKIILSTNICETSITIDNIVYVIDSGLCKQKIYNPNSGIESLVTLPCSKASVNQRTGRAG 862
Query: 91 RVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDEVVRTLES 131
R ++G C+ L+++ D +PEIQR + ++ L+S
Sbjct: 863 RKRDGKCFRLFTKKSFIDLSDNSIPEIQRCEISSMILLLKS 903
Score = 124 (48.7 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 29/81 (35%), Positives = 46/81 (56%)
Query: 160 LDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKMLLMASI-FSCVDP 218
LDPP P + L+LL + AL+D+ +LT G +A+ P D + KM+L A+ ++CVD
Sbjct: 915 LDPPSPIVIIKGLELLYSLGALNDEGNLTRTGRKMAEFPTDVKSSKMILSAAEKYNCVDE 974
Query: 219 VFTVAASLGFKDAFYCPMIGK 239
+ VA+ L + + GK
Sbjct: 975 ILNVASMLTHANNIFYVQKGK 995
Score = 104 (41.7 bits), Expect = 1.5e-19, Sum P(2) = 1.5e-19
Identities = 25/97 (25%), Positives = 49/97 (50%)
Query: 239 KMLLMASI-FSCVDPVFTVAASLGF-KDAFYCPMNMEKDVDKQKNILAQGAKSDYVVLIN 296
KM+L A+ ++CVD + VA+ L + FY EK+ + K + D+++ +N
Sbjct: 960 KMILSAAEKYNCVDEILNVASMLTHANNIFYVQKGKEKEAENIKKMFIIEGGGDFLLFLN 1019
Query: 297 AMQGWEQALEHNYAHDYCRENFXXXXXXXXXRDMKDQ 333
++Q E+N++ +C ++F +D+K Q
Sbjct: 1020 I---YKQCEENNFSTSFCYDHFLQYHTLIKVKDVKTQ 1053
>UNIPROTKB|Q608K8 [details] [associations]
symbol:MCA1482 "ATP-dependent helicase HrpA" species:243233
"Methylococcus capsulatus str. Bath" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR010222
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:AE017282 GenomeReviews:AE017282_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578
OMA:TYQFEPG InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:YP_113939.1 ProteinModelPortal:Q608K8 GeneID:3104911
KEGG:mca:MCA1482 PATRIC:22606802 Uniprot:Q608K8
Length = 1294
Score = 196 (74.1 bits), Expect = 1.4e-21, Sum P(2) = 1.4e-21
Identities = 49/115 (42%), Positives = 69/115 (60%)
Query: 21 QNKSVFEL-GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISL 79
+ + +F+ G R+IVLATN+AETS+T+ I V+D G ++S + + + L E IS
Sbjct: 331 EQEKIFKPHGRRRIVLATNVAETSLTVPGIRGVIDAGYARISRYSHRSKLQRLPIEKISR 390
Query: 80 ANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYPL---PEIQRTRLDEVVRTLES 131
A+A QR GR GRV GVC LYS EQ F + P PEI RT L V+ +++
Sbjct: 391 ASANQRAGRCGRVGPGVCIRLYS---EQDFLNRPEFTDPEILRTNLAAVILQMKA 442
Score = 134 (52.2 bits), Expect = 1.4e-21, Sum P(2) = 1.4e-21
Identities = 28/71 (39%), Positives = 45/71 (63%)
Query: 160 LDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKMLLMASIFSCVDPV 219
++PPD V+ L+ L+ I+ALD LT LG LA+LP+DP++G++LL + +C+ V
Sbjct: 454 VEPPDERLVRDGLRTLQEINALDAQGRLTELGRRLARLPVDPRLGRILLAGAEENCLSEV 513
Query: 220 FTVAASLGFKD 230
+ A+L D
Sbjct: 514 CIIVAALSVPD 524
Score = 98 (39.6 bits), Expect = 7.9e-18, Sum P(2) = 7.9e-18
Identities = 25/102 (24%), Positives = 47/102 (46%)
Query: 235 PMIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKNILAQGAKSDYVVL 294
P +G++LL + +C+ V + A+L D P + + D QK+ + SD++ +
Sbjct: 495 PRLGRILLAGAEENCLSEVCIIVAALSVPDPRERPADKAQAAD-QKHARFRHPDSDFMAI 553
Query: 295 INAMQGWEQALEH---NYAHDYCRENFXXXXXXXXXRDMKDQ 333
+ +E+ +H + YCR+NF RD+ Q
Sbjct: 554 LALWNDYEEQRQHLSGSKLRQYCRDNFLSALRMREWRDIHQQ 595
>UNIPROTKB|Q8EEY1 [details] [associations]
symbol:hrpA "ATP-dependent helicase HrpA" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578
OMA:TYQFEPG InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:NP_717826.1 ProteinModelPortal:Q8EEY1 GeneID:1169965
KEGG:son:SO_2229 PATRIC:23524089 ProtClustDB:CLSK906644
Uniprot:Q8EEY1
Length = 1293
Score = 265 (98.3 bits), Expect = 1.7e-21, P = 1.7e-21
Identities = 73/221 (33%), Positives = 115/221 (52%)
Query: 17 LKHLQNKSVFELGV-RKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPE 75
L + + VF R+IVLATN+AETS+T+ I YV+D G ++S + + + L E
Sbjct: 325 LSYGEQSKVFSSHTGRRIVLATNVAETSLTVPGIRYVIDPGTARISRYSYRTKVQRLPIE 384
Query: 76 WISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDEVVRTLESKKFK 135
IS A+A QR+GR GRV G+C LY A + PEI RT L V+ +
Sbjct: 385 PISQASANQRQGRCGRVGPGICIRLYDEADFNNRPAFTDPEILRTNLASVI-------LQ 437
Query: 136 MVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLA 195
M++ + AF P++ P DP L L+ L+ + + LTPLG L+
Sbjct: 438 MLAIGLGDI--AAF-PFIEPP----DPRHIRDGFLLLEELQAVKQQKGNIVLTPLGRQLS 490
Query: 196 KLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPM 236
++P+DP++ +M++ + C++ V +A+ L +D PM
Sbjct: 491 QIPVDPRLARMVIESHQLGCLNEVLVIASGLSIQDPRERPM 531
>TIGR_CMR|SO_2229 [details] [associations]
symbol:SO_2229 "ATP-dependent helicase HrpA" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578
OMA:TYQFEPG InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:NP_717826.1 ProteinModelPortal:Q8EEY1 GeneID:1169965
KEGG:son:SO_2229 PATRIC:23524089 ProtClustDB:CLSK906644
Uniprot:Q8EEY1
Length = 1293
Score = 265 (98.3 bits), Expect = 1.7e-21, P = 1.7e-21
Identities = 73/221 (33%), Positives = 115/221 (52%)
Query: 17 LKHLQNKSVFELGV-RKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPE 75
L + + VF R+IVLATN+AETS+T+ I YV+D G ++S + + + L E
Sbjct: 325 LSYGEQSKVFSSHTGRRIVLATNVAETSLTVPGIRYVIDPGTARISRYSYRTKVQRLPIE 384
Query: 76 WISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDEVVRTLESKKFK 135
IS A+A QR+GR GRV G+C LY A + PEI RT L V+ +
Sbjct: 385 PISQASANQRQGRCGRVGPGICIRLYDEADFNNRPAFTDPEILRTNLASVI-------LQ 437
Query: 136 MVSRRFKVMLNTAFTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLA 195
M++ + AF P++ P DP L L+ L+ + + LTPLG L+
Sbjct: 438 MLAIGLGDI--AAF-PFIEPP----DPRHIRDGFLLLEELQAVKQQKGNIVLTPLGRQLS 490
Query: 196 KLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPM 236
++P+DP++ +M++ + C++ V +A+ L +D PM
Sbjct: 491 QIPVDPRLARMVIESHQLGCLNEVLVIASGLSIQDPRERPM 531
>ASPGD|ASPL0000001852 [details] [associations]
symbol:AN6085 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005730
"nucleolus" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:BN001301 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:PGQEEID EnsemblFungi:CADANIAT00006930
Uniprot:C8V2M2
Length = 824
Score = 207 (77.9 bits), Expect = 1.7e-21, Sum P(2) = 1.7e-21
Identities = 43/102 (42%), Positives = 62/102 (60%)
Query: 31 RKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAG 90
RKI+LATNIAETS+T+ + YVVDCGK K+ F + + +L + IS + A QR+GRAG
Sbjct: 462 RKIILATNIAETSVTVSGVRYVVDCGKAKIKQFRTRLGLDSLLVKPISKSAAIQRKGRAG 521
Query: 91 RVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDEVVRTLESK 132
R G CY LY+ + PEI R L + + ++++
Sbjct: 522 REAPGQCYRLYTEKDYLALDEVNTPEILRCDLSQAILNMKAR 563
Score = 115 (45.5 bits), Expect = 1.7e-21, Sum P(2) = 1.7e-21
Identities = 28/73 (38%), Positives = 43/73 (58%)
Query: 162 PPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKMLLMASIFS--CVDPV 219
PP A + L+LL I+ALD+ ++ G H+AKLPL P +G++LL AS F C+ V
Sbjct: 577 PPREALEKALLQLLS-IEALDETGKISETGSHIAKLPLTPTLGRVLLAASDFGPDCLTDV 635
Query: 220 FTVAASLGFKDAF 232
+ + L ++ F
Sbjct: 636 IDIISCLSVENIF 648
>RGD|1306837 [details] [associations]
symbol:Dhx37 "DEAH (Asp-Glu-Ala-His) box polypeptide 37"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
RGD:1306837 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074985 KO:K14780 CTD:57647
OMA:AKLQPRT OrthoDB:EOG4P2Q1J IPI:IPI00391385 RefSeq:NP_001099396.2
UniGene:Rn.24493 Ensembl:ENSRNOT00000030823 GeneID:288647
KEGG:rno:288647 UCSC:RGD:1306837 NextBio:628468 ArrayExpress:D4A1R0
Uniprot:D4A1R0
Length = 1150
Score = 262 (97.3 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 60/204 (29%), Positives = 104/204 (50%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
G R V+ATN+AETS+TI I YVVDCGK K +D +++ + W+S A+A QR GR
Sbjct: 605 GTRLCVIATNVAETSLTIPGIKYVVDCGKVKKRYYDRVTGVSSFRVTWVSQASADQRAGR 664
Query: 89 AGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSRRFKVMLNTA 148
AGR + G CY LYS A F+ +P PEI R +++++ +++ + V F +
Sbjct: 665 AGRTEPGHCYRLYSSAVFGDFEQFPPPEITRRPVEDLILQMKALNIEKVIN-FPFPTPPS 723
Query: 149 FTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKMLL 208
+ +++L + ++ + +T LG ++ P+ P+ KML
Sbjct: 724 VEALI-AAEELLIALGALQAPPKQERMKKLQMSQLSCPITALGRTMSTFPVAPRYAKMLA 782
Query: 209 MASIFSCVDPVFTVAASLGFKDAF 232
++ C+ + A++ ++ F
Sbjct: 783 LSQQHGCLPYTIAIVAAMTVRELF 806
>TIGR_CMR|CPS_2243 [details] [associations]
symbol:CPS_2243 "ATP-dependent helicase HrpA"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004386
"helicase activity" evidence=ISS] [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR010222 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578 OMA:TYQFEPG
InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:YP_268968.1 ProteinModelPortal:Q482P9 STRING:Q482P9
GeneID:3518699 KEGG:cps:CPS_2243 PATRIC:21467591
BioCyc:CPSY167879:GI48-2313-MONOMER Uniprot:Q482P9
Length = 1375
Score = 254 (94.5 bits), Expect = 2.8e-20, P = 2.8e-20
Identities = 64/202 (31%), Positives = 105/202 (51%)
Query: 31 RKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAG 90
R IVLATN+AETS+T+ I YV+D G ++S + + + L E +S A+A QR GR G
Sbjct: 376 RNIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPVSQASANQRSGRCG 435
Query: 91 RVQEGVCYHLYSRAREQTFQDYPLPEIQRTRLDEVVRTLESKKFKMVSR-RF-KVMLNTA 148
RV EG+C LYS ++ ++ PEI RT L V+ + + ++ F + N
Sbjct: 436 RVSEGICIRLYSEDDYKSRAEFTDPEILRTNLATVILQMHALDLGDIANFPFVEAPDNRN 495
Query: 149 FTPYVWVPKQVLDPPDPASVQLSLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKMLL 208
T V + +++ + + K A LT G LAK P+DP++ KM++
Sbjct: 496 ITDGVRLLEEIAAVESIENADKNAKG----KASSTATQLTKSGRLLAKFPIDPRLAKMVV 551
Query: 209 MASIFSCVDPVFTVAASLGFKD 230
+ F C++ + + ++L +D
Sbjct: 552 SSIEFGCIEQILIIVSALSIQD 573
>UNIPROTKB|F5H625 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 GO:GO:0004386
IPI:IPI01010408 DNASU:79665 HGNC:HGNC:18018 ChiTaRS:DHX40
GenomeRNAi:79665 NextBio:68866 EMBL:AC091271 EMBL:AC004167
Ensembl:ENST00000538926 UCSC:uc010woe.2 ArrayExpress:F5H625
Bgee:F5H625 Uniprot:F5H625
Length = 250
Score = 205 (77.2 bits), Expect = 3.0e-20, Sum P(2) = 3.0e-20
Identities = 47/103 (45%), Positives = 64/103 (62%)
Query: 29 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 88
G+RK V++TNI+ TS+TID I YVVD G K N + + + L+ IS + A QR GR
Sbjct: 13 GIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGR 72
Query: 89 AGRVQEGVCYHLYSRAR-EQTFQDYPLPEIQRTRLDEVVRTLE 130
AGR G C+ +YS+ Q D+ +PEI+RT L VV TL+
Sbjct: 73 AGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLK 115
Score = 54 (24.1 bits), Expect = 3.0e-20, Sum P(2) = 3.0e-20
Identities = 16/64 (25%), Positives = 32/64 (50%)
Query: 235 PMIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNME--KDVDKQKNILAQ--GAKSD 290
P + ++ A+ C D + +AA L ++ F P++ E K+ +++ LA G +D
Sbjct: 142 PHLTCAVIKAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAAKAGGFND 201
Query: 291 YVVL 294
+ L
Sbjct: 202 FATL 205
>GENEDB_PFALCIPARUM|PF08_0042 [details] [associations]
symbol:PF08_0042 "ATP-dependent RNA helicase
prh1, putative" species:5833 "Plasmodium falciparum" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509
EMBL:AL844507 RefSeq:XP_001349312.1 ProteinModelPortal:Q8IB47
EnsemblProtists:PF08_0042:mRNA GeneID:2655493 KEGG:pfa:PF08_0042
EuPathDB:PlasmoDB:PF3D7_0821300 ProtClustDB:CLSZ2515096
Uniprot:Q8IB47
Length = 867
Score = 208 (78.3 bits), Expect = 3.5e-20, Sum P(2) = 3.5e-20
Identities = 50/130 (38%), Positives = 75/130 (57%)
Query: 5 FQIWFLQCPSSGLKHLQNKSVFEL---GVRKIVLATNIAETSITIDDIVYVVDCGKTKMS 61
+ + LQ SS L + + K +FE RK++L+TNIAETS+TI +I YV+D GK K+
Sbjct: 398 YNMKILQLYSS-LPNKKQKVIFEPVPPNTRKVILSTNIAETSVTIPNIKYVIDSGKVKIK 456
Query: 62 NFDVKDNIATLKPEWISLANAKQRRGRAGRVQEGVCYHLYSRAREQTFQDYPLPEIQRTR 121
FDV L+ IS +A QR GRAGR G Y +Y++ + + +PEI R+
Sbjct: 457 YFDVNRGSNVLRVTQISKDSAIQRSGRAGREAPGQVYRIYTKEEYENMNPFLIPEIFRSD 516
Query: 122 LDEVVRTLES 131
L ++ L++
Sbjct: 517 LTQIYLELKA 526
Score = 102 (41.0 bits), Expect = 3.5e-20, Sum P(2) = 3.5e-20
Identities = 23/62 (37%), Positives = 35/62 (56%)
Query: 171 SLKLLRLIDALDDDEHLTPLGYHLAKLPLDPQIGKMLLMASIFSCVDPVFTVAASLGFKD 230
S K+L I+A+D + +LT LG L PL+P +LL + F+C+D + T+ A L
Sbjct: 549 SAKMLFKINAIDMNNNLTDLGKKLCLFPLNPIYANILLCSIEFNCIDEIATIVALLNCDS 608
Query: 231 AF 232
F
Sbjct: 609 IF 610
Score = 66 (28.3 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 14/47 (29%), Positives = 25/47 (53%)
Query: 235 PMIGKMLLMASIFSCVDPVFTVAASLGFKDAFYCPMNMEKDVDKQKN 281
P+ +LL + F+C+D + T+ A L D+ + N +D+D N
Sbjct: 579 PIYANILLCSIEFNCIDEIATIVALLNC-DSIFLNYNFYEDLDTLNN 624
WARNING: HSPs involving 51 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.324 0.137 0.417 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 350 341 0.00095 116 3 11 22 0.46 33
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 301
No. of states in DFA: 614 (65 KB)
Total size of DFA: 238 KB (2129 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 28.02u 0.09s 28.11t Elapsed: 00:00:12
Total cpu time: 28.09u 0.09s 28.18t Elapsed: 00:00:12
Start: Thu Aug 15 12:03:12 2013 End: Thu Aug 15 12:03:24 2013
WARNINGS ISSUED: 2