BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6094
(455 letters)
Database: nr
31,244,244 sequences; 10,788,889,170 total letters
Searching..................................................done
>gi|380029828|ref|XP_003698567.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like, partial
[Apis florea]
Length = 863
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 88/204 (43%), Positives = 119/204 (58%), Gaps = 50/204 (24%)
Query: 100 QQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVYCTYTFMGVSPMKVFFCK 159
++YP +V++ L++P E ++ D+I L++HIC T+ PGA
Sbjct: 412 KKYPREVIDQLRNPYSEMMSLDLIEQLIRHICRTKAPGA--------------------- 450
Query: 160 NVLQRLMKGVGANSPKRWVKLLRSMLVVPILVFLPGWDTINSLHRSMCQSSFFNSSRFQI 219
ILVFLPG I L+R M + ++ S + I
Sbjct: 451 -----------------------------ILVFLPGMMDITKLNRMMLDTGCYSQSHYVI 481
Query: 220 IPLHSMLPTVSQKSIFNTPPEGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKD 279
PLHS +PT+ QK IF PP+GVRKI++AT+IAETSITI+D+VYV+DCGK K FD++
Sbjct: 482 YPLHSRMPTIDQKLIFKEPPKGVRKIIIATSIAETSITIEDVVYVIDCGKMKFGKFDIQK 541
Query: 280 NIATLKPEWISLANAKQRRGRAGR 303
NI TL+PEW+SLANAKQRRGRAGR
Sbjct: 542 NIQTLEPEWVSLANAKQRRGRAGR 565
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 44/64 (68%)
Query: 311 QQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQS 370
++YP +V++ L++P E ++ D+I L++HIC T+ PGAILVFLPG I L+R M +
Sbjct: 412 KKYPREVIDQLRNPYSEMMSLDLIEQLIRHICRTKAPGAILVFLPGMMDITKLNRMMLDT 471
Query: 371 SFFN 374
++
Sbjct: 472 GCYS 475
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 40/65 (61%)
Query: 20 RQKLLNDPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISG 79
+ KL D LD E K ++Y +M++ R KLPSYQ R +L++++ NQ+ VISG
Sbjct: 134 KSKLERDIELDTKLLAEYKAKQSLQKYVDMIKVRSKLPSYQKRSDILELIKENQVIVISG 193
Query: 80 ETGSG 84
ETG G
Sbjct: 194 ETGCG 198
>gi|110755029|ref|XP_394965.3| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Apis
mellifera]
Length = 964
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 88/204 (43%), Positives = 119/204 (58%), Gaps = 50/204 (24%)
Query: 100 QQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVYCTYTFMGVSPMKVFFCK 159
++YP +V++ L++P E ++ D+I L++HIC T+ PGA
Sbjct: 412 KKYPREVIDQLRNPYSEMMSLDLIEQLIRHICRTKAPGA--------------------- 450
Query: 160 NVLQRLMKGVGANSPKRWVKLLRSMLVVPILVFLPGWDTINSLHRSMCQSSFFNSSRFQI 219
ILVFLPG I L+R M + ++ S + I
Sbjct: 451 -----------------------------ILVFLPGMMDITKLNRMMLDTGCYSQSHYVI 481
Query: 220 IPLHSMLPTVSQKSIFNTPPEGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKD 279
PLHS +PT+ QK IF PP+GVRKI++AT+IAETSITI+D+VYV+DCGK K FD++
Sbjct: 482 YPLHSRMPTIDQKLIFKEPPKGVRKIIIATSIAETSITIEDVVYVIDCGKMKFGKFDIQK 541
Query: 280 NIATLKPEWISLANAKQRRGRAGR 303
NI TL+PEW+SLANAKQRRGRAGR
Sbjct: 542 NIQTLEPEWVSLANAKQRRGRAGR 565
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 44/64 (68%)
Query: 311 QQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQS 370
++YP +V++ L++P E ++ D+I L++HIC T+ PGAILVFLPG I L+R M +
Sbjct: 412 KKYPREVIDQLRNPYSEMMSLDLIEQLIRHICRTKAPGAILVFLPGMMDITKLNRMMLDT 471
Query: 371 SFFN 374
++
Sbjct: 472 GCYS 475
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 40/65 (61%)
Query: 20 RQKLLNDPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISG 79
+ KL D LD+ E K ++Y +M++ R KLPSY+ R +L+++ NQ+ VISG
Sbjct: 134 KSKLERDTELDSKLLAEYKAKQSLQKYMDMIKVRSKLPSYKKRSEILELINENQVIVISG 193
Query: 80 ETGSG 84
ETG G
Sbjct: 194 ETGCG 198
>gi|383865235|ref|XP_003708080.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like
[Megachile rotundata]
Length = 976
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 90/207 (43%), Positives = 122/207 (58%), Gaps = 50/207 (24%)
Query: 97 SETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVYCTYTFMGVSPMKVF 156
+ ++Y V+ L++PE E ++ ++I L+++IC TQ PGA
Sbjct: 426 ASEKRYSAQVIGQLRNPESEKLSINLIEELIRYICRTQPPGA------------------ 467
Query: 157 FCKNVLQRLMKGVGANSPKRWVKLLRSMLVVPILVFLPGWDTINSLHRSMCQSSFFNSSR 216
ILVFLPG I +L + M +S + S+
Sbjct: 468 --------------------------------ILVFLPGMMDIVNLQKRMIESRQYPESQ 495
Query: 217 FQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFD 276
F I PLHS+LPT+ QK IF+ PP+G+RKI++AT+IAETSITI+D+VYV++CG+TK FD
Sbjct: 496 FVIYPLHSLLPTIEQKLIFSEPPDGIRKIIIATSIAETSITIEDVVYVINCGRTKFGKFD 555
Query: 277 VKDNIATLKPEWISLANAKQRRGRAGR 303
VK NI TL+PEWISLANAKQRRGRAGR
Sbjct: 556 VKKNIQTLEPEWISLANAKQRRGRAGR 582
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 42/63 (66%)
Query: 308 SETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSM 367
+ ++Y V+ L++PE E ++ ++I L+++IC TQ PGAILVFLPG I +L + M
Sbjct: 426 ASEKRYSAQVIGQLRNPESEKLSINLIEELIRYICRTQPPGAILVFLPGMMDIVNLQKRM 485
Query: 368 CQS 370
+S
Sbjct: 486 IES 488
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 37/62 (59%)
Query: 23 LLNDPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETG 82
L D +D E K S Y+ M++ R KLPSY+ R +L ++R+NQ+ VISGETG
Sbjct: 155 LERDSNIDVQLLNEYKAKQSSSEYETMMKCRLKLPSYKKRPEILQLLRDNQVVVISGETG 214
Query: 83 SG 84
G
Sbjct: 215 CG 216
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 399 SFECKPSTAKIIKELRARLDMLLAHKLSHPGTTAWGDPNEGNILH 443
+F C TA++I+EL+ +L +K++HPGT W D EGN L+
Sbjct: 910 TFRCDKRTAELIQELQRHFKNILEYKITHPGTVNW-DSYEGNFLN 953
>gi|350402556|ref|XP_003486528.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Bombus
impatiens]
Length = 977
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 88/205 (42%), Positives = 119/205 (58%), Gaps = 50/205 (24%)
Query: 99 TQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVYCTYTFMGVSPMKVFFC 158
T++Y +V+ L++P E ++ D+I L+++IC T PGA
Sbjct: 424 TKKYSKEVIEQLRNPNSEKLSLDLIEQLVRYICKTNDPGA-------------------- 463
Query: 159 KNVLQRLMKGVGANSPKRWVKLLRSMLVVPILVFLPGWDTINSLHRSMCQSSFFNSSRFQ 218
ILVFLPG I LH+ M ++ + +++
Sbjct: 464 ------------------------------ILVFLPGMMDIIKLHKIMLENRQYPQNQYV 493
Query: 219 IIPLHSMLPTVSQKSIFNTPPEGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVK 278
I PLHS +PTV QK +F TPPEGVRKI++AT+IAETSITI+D+VYVVDCGK K FD++
Sbjct: 494 IYPLHSRMPTVDQKLVFKTPPEGVRKIIIATSIAETSITIEDVVYVVDCGKMKFGKFDLQ 553
Query: 279 DNIATLKPEWISLANAKQRRGRAGR 303
N+ TL+PEW+SLANAKQRRGRAGR
Sbjct: 554 KNVQTLEPEWVSLANAKQRRGRAGR 578
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 46/72 (63%), Gaps = 2/72 (2%)
Query: 310 TQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQ 369
T++Y +V+ L++P E ++ D+I L+++IC T PGAILVFLPG I LH+ M +
Sbjct: 424 TKKYSKEVIEQLRNPNSEKLSLDLIEQLVRYICKTNDPGAILVFLPGMMDIIKLHKIMLE 483
Query: 370 SSFF--NSCLLY 379
+ + N ++Y
Sbjct: 484 NRQYPQNQYVIY 495
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 59/117 (50%), Gaps = 23/117 (19%)
Query: 20 RQKLLNDPVLDAAFKKEMIRKLQS-RRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVIS 78
+ KL D LD E R LQS + Y+ M + R KLPSY R +LD+++ NQ+ VIS
Sbjct: 147 KSKLERDIELDKKLLNEH-RTLQSTQEYENMKQFRLKLPSYHKRSKILDLIKENQVIVIS 205
Query: 79 GETGSGPPLHLDFITLKRSETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQR 135
GETG G K ++ QY + D ++E N S+++ ICT R
Sbjct: 206 GETGCG----------KTTQVAQY-------ILDDQIEQENG----SIVRIICTQPR 241
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 51/98 (52%), Gaps = 7/98 (7%)
Query: 350 ILVFLPGWDTINSLHRSMCQSSFFNSCLLY---EFAMVDNKPKEIITVRDCLSFECKPST 406
I F T LH + C S+ LL+ + ++ + I++ + F C +
Sbjct: 854 ITYFTKQLSTAIYLHDTTCVSA---PILLFTAPKMSIRKERGNYFISLANNQMFACDLQS 910
Query: 407 AKIIKELRARLDMLLAHKLSHPGTTAWGDPNEGNILHC 444
A++I++L+ + + +L +K++HPGT W + EG++L+
Sbjct: 911 AQLIQKLQEQFNNMLEYKITHPGTVCW-NSFEGDVLNA 947
>gi|328711816|ref|XP_001947767.2| PREDICTED: probable ATP-dependent RNA helicase DHX36-like
[Acyrthosiphon pisum]
Length = 1055
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 86/204 (42%), Positives = 118/204 (57%), Gaps = 50/204 (24%)
Query: 100 QQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVYCTYTFMGVSPMKVFFCK 159
++YP +LN L++P E + ++I L+ +IC + GA
Sbjct: 506 KKYPYAILNWLENPTSEDTDYELILELIYYICNNKDDGA--------------------- 544
Query: 160 NVLQRLMKGVGANSPKRWVKLLRSMLVVPILVFLPGWDTINSLHRSMCQSSFFNSSRFQI 219
ILVFL GWD I+ L + + F N+SR+ +
Sbjct: 545 -----------------------------ILVFLSGWDQISKLTKILKDKGFGNTSRYIL 575
Query: 220 IPLHSMLPTVSQKSIFNTPPEGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKD 279
IPLHSMLPTVSQKS+F +PP GVRKI+L+TNIAETS+TIDD+VYV++ G+ K+ FD ++
Sbjct: 576 IPLHSMLPTVSQKSVFESPPRGVRKIILSTNIAETSVTIDDVVYVINNGRMKLKGFDAEN 635
Query: 280 NIATLKPEWISLANAKQRRGRAGR 303
NI TL EW+SLAN++QRRGRAGR
Sbjct: 636 NIGTLNEEWVSLANSRQRRGRAGR 659
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 45/71 (63%)
Query: 14 VTSWETRQKLLNDPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQ 73
V S ++ KL ND +A + E+ K + +Y+ M E RKKLPSY +D +L+++ NQ
Sbjct: 230 VASIQSNMKLRNDEHKNAFLRNELENKRRIPKYRSMCEIRKKLPSYSKKDEILELIHRNQ 289
Query: 74 ITVISGETGSG 84
+ +ISGETG G
Sbjct: 290 VILISGETGCG 300
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 40/65 (61%)
Query: 311 QQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQS 370
++YP +LN L++P E + ++I L+ +IC + GAILVFL GWD I+ L + +
Sbjct: 506 KKYPYAILNWLENPTSEDTDYELILELIYYICNNKDDGAILVFLSGWDQISKLTKILKDK 565
Query: 371 SFFNS 375
F N+
Sbjct: 566 GFGNT 570
>gi|340711835|ref|XP_003394474.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Bombus
terrestris]
Length = 977
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 88/205 (42%), Positives = 119/205 (58%), Gaps = 50/205 (24%)
Query: 99 TQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVYCTYTFMGVSPMKVFFC 158
T++Y +V+ L++P E ++ D+I L+++IC T+ GA
Sbjct: 424 TKKYSKEVIEQLRNPNSEKLSLDLIEQLVRYICKTKDSGA-------------------- 463
Query: 159 KNVLQRLMKGVGANSPKRWVKLLRSMLVVPILVFLPGWDTINSLHRSMCQSSFFNSSRFQ 218
ILVFLPG I LH+ M ++ + +++
Sbjct: 464 ------------------------------ILVFLPGMMDIIKLHKIMLENRQYPQNQYV 493
Query: 219 IIPLHSMLPTVSQKSIFNTPPEGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVK 278
I PLHS +PTV QK +F TPPEGVRKI++AT+IAETSITI+D+VYVVDCGK K FD++
Sbjct: 494 IYPLHSRMPTVDQKLVFKTPPEGVRKIIIATSIAETSITIEDVVYVVDCGKMKFGKFDLQ 553
Query: 279 DNIATLKPEWISLANAKQRRGRAGR 303
NI TL+PEW+SLANAKQRRGRAGR
Sbjct: 554 KNIQTLEPEWVSLANAKQRRGRAGR 578
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 46/72 (63%), Gaps = 2/72 (2%)
Query: 310 TQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQ 369
T++Y +V+ L++P E ++ D+I L+++IC T+ GAILVFLPG I LH+ M +
Sbjct: 424 TKKYSKEVIEQLRNPNSEKLSLDLIEQLVRYICKTKDSGAILVFLPGMMDIIKLHKIMLE 483
Query: 370 SSFF--NSCLLY 379
+ + N ++Y
Sbjct: 484 NRQYPQNQYVIY 495
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 20 RQKLLNDPVLDAAFKKEMIRKLQ-SRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVIS 78
+ KL D LD E R LQ ++ Y+ M + R KLPS+ R +L++++ NQ+ VIS
Sbjct: 147 KSKLEKDIELDKKLLNEH-RTLQLTQEYENMKQFRLKLPSHHKRSKILELIKENQVIVIS 205
Query: 79 GETGSG 84
GETG G
Sbjct: 206 GETGCG 211
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 52/98 (53%), Gaps = 7/98 (7%)
Query: 350 ILVFLPGWDTINSLHRSMCQSSFFNSCLLY---EFAMVDNKPKEIITVRDCLSFECKPST 406
I F T LH + C S+ S LL+ + ++ K I++ + F C +
Sbjct: 854 ITYFTKQLSTAIYLHDTTCVSA---SILLFTAPKVSIRKEKGNYFISLANSQIFACDLQS 910
Query: 407 AKIIKELRARLDMLLAHKLSHPGTTAWGDPNEGNILHC 444
A++I++L+ + + +L +K++HPGT W + EG++L+
Sbjct: 911 AQLIQKLQEQFNNMLEYKITHPGTVCW-NSVEGDVLNA 947
>gi|488587119|ref|XP_004478889.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DHX36 [Dasypus novemcinctus]
Length = 856
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 110/302 (36%), Positives = 163/302 (53%), Gaps = 20/302 (6%)
Query: 21 QKLLNDPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDA-VLDMVRNNQIT---- 75
QK D +D +++ +K RY EM R+KLPSY M+ LD+ N+ I
Sbjct: 180 QKNEPDITIDQQLLEDLQKKKTDLRYIEMQHFREKLPSYGMQKIRELDLFLNHSIILLLA 239
Query: 76 ------VISGETGSGPPLHLDFITLKRSETQQYPNDVLNMLKD-PELEGVNNDVIFSLLQ 128
V S G+ P +H+ T E D++ ++ PE + + + +Q
Sbjct: 240 VKIIMFVFSAIIGNCPMIHIPGFTFPVVEY--LLEDIIEKIRYVPEQKEHRSQLKRGFMQ 297
Query: 129 -HICTTQRPGAILVYCTYTFMGVSPMKVFFCKNVLQRL-MKGVGANSPKRWVKLLRSMLV 186
H+ ++ +Y V ++ + + + + M V L+R +++
Sbjct: 298 GHVNRQEKEEKEAIYKERWPDYVRELRRRYSASTVDVMEMMDDDKVDLNLIVALIRHIVL 357
Query: 187 V----PILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGV 242
ILVFLPGWD I++LH + F S +F IIPLHS++PTV+Q +F P GV
Sbjct: 358 EEEDGAILVFLPGWDNISTLHDLLMSQVMFKSDKFLIIPLHSLMPTVNQTQVFKRTPPGV 417
Query: 243 RKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAG 302
RKIV+ATNIAETSITIDD+VYV+D GK K ++FD ++NI+T+ EW+S ANAKQR+GRAG
Sbjct: 418 RKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAG 477
Query: 303 RT 304
R
Sbjct: 478 RV 479
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Query: 316 DVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
DV+ M+ D + V+ ++I +L++HI + GAILVFLPGWD I++LH + F S
Sbjct: 333 DVMEMMDD---DKVDLNLIVALIRHIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKS 389
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 376 CLLY---EFAMVDNKPKEIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHPGTTA 432
CLL+ + ++ + +E I V + + F+ A ++KELR LD+LL K+ P
Sbjct: 757 CLLFFGGDISIQKDNDQETIAVDEWIIFQSPARIAHLVKELRKELDILLQEKIESPHPVD 816
Query: 433 WGD 435
W D
Sbjct: 817 WKD 819
>gi|432891825|ref|XP_004075666.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Oryzias
latipes]
Length = 1050
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 77/124 (62%), Positives = 96/124 (77%)
Query: 180 LLRSMLVVPILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPP 239
++RS ILVFLPGWD I+ L+ + + F S RF IIPLHS++PTV+Q +F PP
Sbjct: 512 IVRSEEEGAILVFLPGWDNISGLNDLLMAQTMFRSDRFVIIPLHSLMPTVNQTQVFKRPP 571
Query: 240 EGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRG 299
GVRKIV+ATNIAETSITIDD+VYV+D GK K +NFD +NI+T+ EW+SLANAKQR+G
Sbjct: 572 PGVRKIVIATNIAETSITIDDVVYVIDGGKIKETNFDTNNNISTMTAEWVSLANAKQRKG 631
Query: 300 RAGR 303
RAGR
Sbjct: 632 RAGR 635
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 43/64 (67%)
Query: 21 QKLLNDPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGE 80
Q+++ D LD K + K +Y+EML+ R+KLPSY ++ +++++ +N++ V+SGE
Sbjct: 201 QEVVRDQSLDDYLKSDFRNKTFEPKYKEMLKFREKLPSYSKKEDLVELINSNRVLVVSGE 260
Query: 81 TGSG 84
TG G
Sbjct: 261 TGCG 264
Score = 45.8 bits (107), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 32/49 (65%)
Query: 327 EGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
+ ++ ++I +L+ HI ++ GAILVFLPGWD I+ L+ + + F S
Sbjct: 498 DKIDLELILALICHIVRSEEEGAILVFLPGWDNISGLNDLLMAQTMFRS 546
>gi|390349687|ref|XP_784575.3| PREDICTED: probable ATP-dependent RNA helicase DHX36-like
[Strongylocentrotus purpuratus]
Length = 1040
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 73/115 (63%), Positives = 92/115 (80%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I+ LH + + F+ RF IIPLHSM+PT++Q+ +F PP GVRKI++A
Sbjct: 454 ILVFLPGWDQISKLHDKLTSQTLFSEERFIIIPLHSMMPTINQRQVFEHPPPGVRKIIIA 513
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITIDD+VYVV+ G+ K +NFDV +NI T+K EW+S A+A QRRGRAGR
Sbjct: 514 TNIAETSITIDDVVYVVNLGRVKETNFDVANNIRTMKAEWVSKASAHQRRGRAGR 568
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 46/64 (71%)
Query: 21 QKLLNDPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGE 80
+L+ DP LD ++E+ +K S +YQ+M R+KLPS+ M+D +L ++R+NQ+ VISGE
Sbjct: 133 HQLMQDPNLDIHLQEELTKKENSEQYQKMQTFRRKLPSFAMKDELLSLIRSNQVVVISGE 192
Query: 81 TGSG 84
TG G
Sbjct: 193 TGCG 196
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 47/103 (45%), Gaps = 14/103 (13%)
Query: 285 KPEWISLANAKQRRGRAGRTLKRSETQQYPNDVLNMLKDPELEGVNN------------D 332
+P W+ K R R K + ++ N+ L +++ E V + D
Sbjct: 379 EPVWVKYKKGK--RNREEEMEKEQQDRKKFNEYLQAMRETYSEQVVDTLSSMDHNVLDLD 436
Query: 333 VIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
+ LL++I + GAILVFLPGWD I+ LH + + F+
Sbjct: 437 LTAELLRYISLQKPEGAILVFLPGWDQISKLHDKLTSQTLFSE 479
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 385 DNKPKEIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHPGTTAWG-DPNEGNILH 443
D++ E + V D + F C TA ++ +LR LD ++ K+++PG T W +EG ++
Sbjct: 886 DDQGHETVFVDDHIKFHCSQETAHLVIKLREELDRVMEQKITNPGPTNWSPASHEGRVMR 945
Query: 444 C 444
Sbjct: 946 A 946
>gi|47224961|emb|CAF97376.1| unnamed protein product [Tetraodon nigroviridis]
Length = 706
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 76/116 (65%), Positives = 92/116 (79%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I+SL+ + F S RF IIPLHS++PTV+Q +F PP GVRKIV+A
Sbjct: 203 ILVFLPGWDGISSLNDLLMAQQMFRSDRFVIIPLHSLMPTVNQTQVFKKPPPGVRKIVIA 262
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT 304
TNIAETSITIDD+VYV+D GK K ++FD +NI+T+ EW+SLANAKQRRGRAGR
Sbjct: 263 TNIAETSITIDDVVYVIDGGKIKETHFDTNNNISTMTEEWVSLANAKQRRGRAGRV 318
Score = 45.4 bits (106), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%)
Query: 327 EGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
E ++ ++I SL++ I + GAILVFLPGWD I+SL+ + F S
Sbjct: 180 EKIDLELIASLIRQIVLNEGEGAILVFLPGWDGISSLNDLLMAQQMFRS 228
>gi|498950173|ref|XP_004543608.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like
[Maylandia zebra]
Length = 1064
Score = 164 bits (415), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 75/115 (65%), Positives = 92/115 (80%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I++L+ + F S RF IIPLHS++PTV+Q +F PP GVRKIV+A
Sbjct: 532 ILVFLPGWDNISTLNDLLMAQQMFRSDRFVIIPLHSLMPTVNQTQVFKRPPPGVRKIVIA 591
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITIDD+VYV+D GK K +NFD +NI+T+ EW+SLANAKQR+GRAGR
Sbjct: 592 TNIAETSITIDDVVYVIDGGKIKETNFDTSNNISTMMAEWVSLANAKQRKGRAGR 646
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 44/64 (68%)
Query: 21 QKLLNDPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGE 80
Q+++ D LD K+++ K +Y+EML+ R+KLPSY ++ ++ ++ +N++ V+SGE
Sbjct: 212 QEVVRDRSLDDYLKRDLQSKKSDGKYKEMLKFREKLPSYGKKEELVTLINSNRVLVVSGE 271
Query: 81 TGSG 84
TG G
Sbjct: 272 TGCG 275
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 32/49 (65%)
Query: 327 EGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
E ++ D+I +L+++I + GAILVFLPGWD I++L+ + F S
Sbjct: 509 EKIDLDLILALIRYIVLNEEEGAILVFLPGWDNISTLNDLLMAQQMFRS 557
>gi|348534749|ref|XP_003454864.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like
[Oreochromis niloticus]
Length = 1064
Score = 164 bits (415), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 75/115 (65%), Positives = 92/115 (80%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I++L+ + F S RF IIPLHS++PTV+Q +F PP GVRKIV+A
Sbjct: 531 ILVFLPGWDNISTLNDLLMAQQMFRSDRFVIIPLHSLMPTVNQTQVFKRPPPGVRKIVIA 590
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITIDD+VYV+D GK K +NFD +NI+T+ EW+SLANAKQR+GRAGR
Sbjct: 591 TNIAETSITIDDVVYVIDGGKIKETNFDTSNNISTMMAEWVSLANAKQRKGRAGR 645
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 44/64 (68%)
Query: 21 QKLLNDPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGE 80
Q+++ D LD K+++ K +Y+EML+ R+KLPSY ++ ++ ++ +N++ V+SGE
Sbjct: 211 QEVVRDRSLDDYLKRDLQSKKSDAKYKEMLKFREKLPSYGKKEELVTLINSNRVLVVSGE 270
Query: 81 TGSG 84
TG G
Sbjct: 271 TGCG 274
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 32/49 (65%)
Query: 327 EGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
E ++ D+I +L+++I + GAILVFLPGWD I++L+ + F S
Sbjct: 508 EKIDLDLILALIRYIVLNEEEGAILVFLPGWDNISTLNDLLMAQQMFRS 556
>gi|157818387|ref|NP_001101148.1| probable ATP-dependent RNA helicase DHX36 [Rattus norvegicus]
gi|149064669|gb|EDM14820.1| DEAH (Asp-Glu-Ala-His) box polypeptide 36 (predicted), isoform
CRA_a [Rattus norvegicus]
Length = 1000
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 84/169 (49%), Positives = 111/169 (65%), Gaps = 7/169 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I++LH + F S RF IIPLHS++PTV+Q +F P GVRKIV+A
Sbjct: 483 ILVFLPGWDNISTLHDLLMSQVMFKSDRFLIIPLHSLMPTVNQTQVFKKTPPGVRKIVIA 542
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITIDD+VYV+D GK K ++FD ++NI+T+ EW+S ANAKQR+GRAGR
Sbjct: 543 TNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGH 602
Query: 309 ETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC---TTQRPGAILVFL 354
Y ++L D +L +++ + L+ +C R G I FL
Sbjct: 603 CYHLYNGLRASLLDDYQLP----EILRTPLEELCLQIKILRLGGIAYFL 647
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 38/56 (67%)
Query: 29 LDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
LD +++ +K RY EM RKKLPSY M+ +++++ N+Q+TVISGETG G
Sbjct: 172 LDQQLLEDLQKKKTDPRYIEMQRFRKKLPSYGMQKELVNLINNHQVTVISGETGCG 227
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Query: 316 DVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
DVL M+ D + V+ ++I +L+++I + GAILVFLPGWD I++LH + F S
Sbjct: 452 DVLEMMDD---DKVDLNLIAALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKS 508
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 376 CLLY---EFAMVDNKPKEIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHPGTTA 432
CLL+ + ++ +K +EII V + + F+ A ++K LR LD+LL K+ P
Sbjct: 901 CLLFFGGDISIQKDKDQEIIAVDEWIVFQSPERIAHLVKGLRKELDILLQEKIECPHPVD 960
Query: 433 WGD 435
W D
Sbjct: 961 WND 963
>gi|270011645|gb|EFA08093.1| hypothetical protein TcasGA2_TC005697 [Tribolium castaneum]
Length = 914
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 90/221 (40%), Positives = 121/221 (54%), Gaps = 52/221 (23%)
Query: 87 LHLDFI---TLKRSETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVYC 143
++ DFI + T+QY V L++PE E +N ++I L+ +C +R
Sbjct: 358 MYSDFIEPHVRQLERTRQYSRQVCIQLRNPECEDINLELILQLVIDVCGKERDE------ 411
Query: 144 TYTFMGVSPMKVFFCKNVLQRLMKGVGANSPKRWVKLLRSMLVVPILVFLPGWDTINSLH 203
GA IL+FL G+ I++L
Sbjct: 412 --------------------------GA-----------------ILIFLTGFHEISTLS 428
Query: 204 RSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLATNIAETSITIDDIVY 263
R M +S F +F I PLHS++PT+ QK IF+TPP G+RKI++ATNIAETSITIDD+VY
Sbjct: 429 RLMSESGRFPPGKFLIFPLHSLMPTLEQKQIFDTPPRGMRKIIIATNIAETSITIDDVVY 488
Query: 264 VVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT 304
V+DCGK K++NFD + N L PEW+SLANA QRRGRAGR
Sbjct: 489 VIDCGKIKVTNFDARTNSDILAPEWVSLANANQRRGRAGRV 529
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 35/62 (56%)
Query: 381 FAMVDNKPKEIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHPGTTAWGDPNEGN 440
F + + I++ L F+C STA IIKELR R + L +K+SHPG WG +E
Sbjct: 830 FNQICEDGRSFISINQNLRFKCSESTASIIKELRDRFNWFLEYKISHPGPVVWGGDDETQ 889
Query: 441 IL 442
IL
Sbjct: 890 IL 891
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 40/63 (63%)
Query: 22 KLLNDPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGET 81
+L D L+ + ++ ++K S +Y M+ R KLP++ M+D +L ++ NQ+ VISGET
Sbjct: 111 RLAEDATLNQSLYEDFLQKQSSPKYMNMIAKRTKLPAFNMKDEILKVIDENQVVVISGET 170
Query: 82 GSG 84
G G
Sbjct: 171 GCG 173
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 44/72 (61%), Gaps = 3/72 (4%)
Query: 303 RTLKRSETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQR-PGAILVFLPGWDTIN 361
R L+R T+QY V L++PE E +N ++I L+ +C +R GAIL+FL G+ I+
Sbjct: 368 RQLER--TRQYSRQVCIQLRNPECEDINLELILQLVIDVCGKERDEGAILIFLTGFHEIS 425
Query: 362 SLHRSMCQSSFF 373
+L R M +S F
Sbjct: 426 TLSRLMSESGRF 437
>gi|73990731|ref|XP_534311.2| PREDICTED: probable ATP-dependent RNA helicase DHX36 isoform 2
[Canis lupus familiaris]
Length = 1002
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 84/169 (49%), Positives = 111/169 (65%), Gaps = 7/169 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I++LH + F S RF IIPLHS++PTV+Q +F P GVRKIV+A
Sbjct: 485 ILVFLPGWDNISTLHDLLMSQVMFKSDRFLIIPLHSLMPTVNQTQVFKKTPPGVRKIVIA 544
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITIDD+VYV+D GK K ++FD ++NI+T+ EW+S ANAKQR+GRAGR
Sbjct: 545 TNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGH 604
Query: 309 ETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC---TTQRPGAILVFL 354
Y ++L D +L +++ + L+ +C R G I FL
Sbjct: 605 CYHLYNGLRASLLDDYQLP----EILRTPLEELCLQIKILRLGGIAYFL 649
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 39/59 (66%)
Query: 26 DPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
D LD +++ +K RY EM R+KLPSY M+ +++M+ N+Q+TVISGETG G
Sbjct: 171 DVALDQQLLEDLRKKKSDLRYIEMQHFREKLPSYGMQKELVNMIDNHQVTVISGETGCG 229
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Query: 316 DVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
DV+ M+ D + V+ ++I +L++HI + GAILVFLPGWD I++LH + F S
Sbjct: 454 DVMEMIDD---DKVDLNLIAALIRHIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKS 510
>gi|301778665|ref|XP_002924750.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like isoform 1
[Ailuropoda melanoleuca]
Length = 1009
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 84/169 (49%), Positives = 111/169 (65%), Gaps = 7/169 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I++LH + F S RF IIPLHS++PTV+Q +F P GVRKIV+A
Sbjct: 492 ILVFLPGWDNISTLHDLLMSQVMFKSDRFLIIPLHSLMPTVNQTQVFKRTPPGVRKIVIA 551
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITIDD+VYV+D GK K ++FD ++NI+T+ EW+S ANAKQR+GRAGR
Sbjct: 552 TNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSQANAKQRKGRAGRVQPGH 611
Query: 309 ETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC---TTQRPGAILVFL 354
Y ++L D +L +++ + L+ +C R G I FL
Sbjct: 612 CYHLYNGLRASLLDDYQLP----EILRTPLEELCLQIKILRLGGIAYFL 656
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 39/59 (66%)
Query: 26 DPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
D LD +++ +K RY EM R+KLPSY M+ +++M+ N+Q+TVISGETG G
Sbjct: 178 DVTLDQQLLEDLQKKKSDLRYIEMQHFREKLPSYGMQKELVNMIDNHQVTVISGETGCG 236
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Query: 316 DVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
DVL M+ D E V+ ++I +L++HI + GAILVFLPGWD I++LH + F S
Sbjct: 461 DVLEMMDD---EKVDLNLIAALIRHIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKS 517
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 376 CLLY---EFAMVDNKPKEIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHPGTTA 432
CLL+ + ++ + +E I V + + F+ A ++KELR LD+LL K+ P
Sbjct: 910 CLLFFGGDISIQKDNDQETIAVDEWIVFQSPARIAHLVKELRKELDILLQEKIESPHPVD 969
Query: 433 WGD 435
W D
Sbjct: 970 WKD 972
>gi|511868979|ref|XP_004755648.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 isoform X1
[Mustela putorius furo]
gi|511974586|ref|XP_004805258.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 isoform X1
[Mustela putorius furo]
Length = 1013
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 84/169 (49%), Positives = 111/169 (65%), Gaps = 7/169 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I++LH + F S RF IIPLHS++PTV+Q +F P GVRKIV+A
Sbjct: 496 ILVFLPGWDNISTLHDLLMSQVMFKSDRFLIIPLHSLMPTVNQTQVFKRTPPGVRKIVIA 555
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITIDD+VYV+D GK K ++FD ++NI+T+ EW+S ANAKQR+GRAGR
Sbjct: 556 TNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGH 615
Query: 309 ETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC---TTQRPGAILVFL 354
Y ++L D +L +++ + L+ +C R G I FL
Sbjct: 616 CYHLYNGLRASLLDDYQLP----EILRTPLEELCLQIKILRLGGIAYFL 660
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 39/59 (66%)
Query: 26 DPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
D LD +++ +K RY EM R+KLPSY M+ +++M+ N+Q+TVISGETG G
Sbjct: 182 DVTLDQQLLEDLQKKKSDLRYIEMQHFREKLPSYGMQKELVNMIDNHQVTVISGETGCG 240
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Query: 316 DVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
DVL M+ D + V+ ++I +L++HI + GAILVFLPGWD I++LH + F S
Sbjct: 465 DVLEMMDD---DKVDLNLIAALIRHIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKS 521
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 376 CLLY---EFAMVDNKPKEIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHPGTTA 432
CLL+ + ++ + +E I V + + F+ A ++KELR LD+LL K+ P
Sbjct: 914 CLLFFGGDISIQKDNDQETIAVDEWIVFQSPARIAHLVKELRKELDILLQEKIESPHPVD 973
Query: 433 WGD 435
W D
Sbjct: 974 WKD 976
>gi|327266972|ref|XP_003218277.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Anolis
carolinensis]
Length = 814
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 73/116 (62%), Positives = 92/116 (79%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I++LH + F S RF IIPLHS++PTV+Q +F P GVRKIV+A
Sbjct: 297 ILVFLPGWDNISTLHDLLMSQIMFKSDRFIIIPLHSLMPTVNQTQVFKRTPPGVRKIVIA 356
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT 304
TNIAETSITIDD+VYV+D GK K ++FD ++NI+T+ EW+S+ANAKQR+GRAGR
Sbjct: 357 TNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMAAEWVSIANAKQRKGRAGRV 412
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 316 DVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
D L M+ D + ++ +++ +L+++I + GAILVFLPGWD I++LH + F S
Sbjct: 266 DALEMMDD---DKIDLNLVAALIKYIALEEEEGAILVFLPGWDNISTLHDLLMSQIMFKS 322
>gi|472371079|ref|XP_004405044.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 isoform 1
[Odobenus rosmarus divergens]
Length = 1011
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 84/169 (49%), Positives = 111/169 (65%), Gaps = 7/169 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I++LH + F S RF IIPLHS++PTV+Q +F P GVRKIV+A
Sbjct: 494 ILVFLPGWDNISTLHDLLMSQVMFKSDRFLIIPLHSLMPTVNQTQVFKRTPPGVRKIVIA 553
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITIDD+VYV+D GK K ++FD ++NI+T+ EW+S ANAKQR+GRAGR
Sbjct: 554 TNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGH 613
Query: 309 ETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC---TTQRPGAILVFL 354
Y ++L D +L +++ + L+ +C R G I FL
Sbjct: 614 CYHLYNGLRASLLDDYQLP----EILRTPLEELCLQIKILRLGGIAYFL 658
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 39/59 (66%)
Query: 26 DPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
D LD +++ +K RY EM R+KLPSY M+ +++M+ N+Q+TVISGETG G
Sbjct: 180 DVTLDQQLLEDLQKKKSDLRYIEMQHFREKLPSYGMQKELVNMIDNHQVTVISGETGCG 238
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Query: 316 DVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
DVL M+ D + V+ ++I +L++HI + GAILVFLPGWD I++LH + F S
Sbjct: 463 DVLEMVDD---DKVDLNLIAALIRHIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKS 519
>gi|281344866|gb|EFB20450.1| hypothetical protein PANDA_014147 [Ailuropoda melanoleuca]
Length = 926
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 84/169 (49%), Positives = 111/169 (65%), Gaps = 7/169 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I++LH + F S RF IIPLHS++PTV+Q +F P GVRKIV+A
Sbjct: 409 ILVFLPGWDNISTLHDLLMSQVMFKSDRFLIIPLHSLMPTVNQTQVFKRTPPGVRKIVIA 468
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITIDD+VYV+D GK K ++FD ++NI+T+ EW+S ANAKQR+GRAGR
Sbjct: 469 TNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSQANAKQRKGRAGRVQPGH 528
Query: 309 ETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC---TTQRPGAILVFL 354
Y ++L D +L +++ + L+ +C R G I FL
Sbjct: 529 CYHLYNGLRASLLDDYQLP----EILRTPLEELCLQIKILRLGGIAYFL 573
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 39/59 (66%)
Query: 26 DPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
D LD +++ +K RY EM R+KLPSY M+ +++M+ N+Q+TVISGETG G
Sbjct: 95 DVTLDQQLLEDLQKKKSDLRYIEMQHFREKLPSYGMQKELVNMIDNHQVTVISGETGCG 153
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Query: 316 DVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
DVL M+ D E V+ ++I +L++HI + GAILVFLPGWD I++LH + F S
Sbjct: 378 DVLEMMDD---EKVDLNLIAALIRHIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKS 434
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 376 CLLY---EFAMVDNKPKEIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHPGTTA 432
CLL+ + ++ + +E I V + + F+ A ++KELR LD+LL K+ P
Sbjct: 827 CLLFFGGDISIQKDNDQETIAVDEWIVFQSPARIAHLVKELRKELDILLQEKIESPHPVD 886
Query: 433 WGD 435
W D
Sbjct: 887 WKD 889
>gi|521031001|gb|EPQ12787.1| Putative ATP-dependent RNA helicase DHX36 [Myotis brandtii]
Length = 1010
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 84/169 (49%), Positives = 112/169 (66%), Gaps = 7/169 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I++LH + F S RF IIPLHS++PTV+Q +F P GVRKIV+A
Sbjct: 493 ILVFLPGWDNISTLHDLLMSQVMFKSDRFLIIPLHSLMPTVNQTQVFKRTPPGVRKIVIA 552
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITIDD+VYV+D GK K ++FD ++NI+T+ EW+S ANAKQR+GRAGR
Sbjct: 553 TNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQSGH 612
Query: 309 ETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC---TTQRPGAILVFL 354
Y + ++L D +L +++ + L+ +C R G I FL
Sbjct: 613 CYHLYNSLRASLLDDYQLP----EILRTPLEELCLQIKILRLGGIAHFL 657
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 39/59 (66%)
Query: 26 DPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
D LD +++ +K RY EM R+KLPS+ M+ +++M+ N+Q+TVISGETG G
Sbjct: 179 DVNLDQQLLEDLQKKKTDLRYIEMQHFREKLPSFGMQKELVNMIDNHQVTVISGETGCG 237
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 14/94 (14%)
Query: 282 ATLKPEWISLANAKQRRGRAGRTLKRSETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHI 341
AT K W ++R A DV+ M+ D + V+ ++I +L+++I
Sbjct: 439 ATYKERWPDYVRELRKRYSASTV-----------DVIEMMDD---DKVDLNLIAALIRYI 484
Query: 342 CTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
+ GAILVFLPGWD I++LH + F S
Sbjct: 485 VLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKS 518
>gi|470646365|ref|XP_004327008.1| PREDICTED: probable ATP-dependent RNA helicase DHX36, partial
[Tursiops truncatus]
Length = 875
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 84/169 (49%), Positives = 111/169 (65%), Gaps = 7/169 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I++LH + F S RF IIPLHS++PTV+Q +F P GVRKIV+A
Sbjct: 409 ILVFLPGWDNISTLHDLLMSQVMFKSDRFLIIPLHSLMPTVNQTQVFKRTPPGVRKIVIA 468
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITIDD+VYV+D GK K ++FD ++NI+T+ EW+S ANAKQR+GRAGR
Sbjct: 469 TNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGH 528
Query: 309 ETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC---TTQRPGAILVFL 354
Y ++L D +L +++ + L+ +C R G I FL
Sbjct: 529 CYHLYNGLRASLLDDYQLP----EILRTPLEELCLQIKILRLGGIAYFL 573
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 39/59 (66%)
Query: 26 DPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
D LD +++ +K RY EM R+KLPSY M+ +++M+ N+Q+TV+SGETG G
Sbjct: 95 DVTLDQQLLEDLQKKKTDLRYIEMQHFREKLPSYGMQKELVNMIDNHQVTVVSGETGCG 153
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Query: 316 DVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
DV+ M+ D + V+ ++I +L+++I + GAILVFLPGWD I++LH + F S
Sbjct: 378 DVIGMMDD---DKVDLNLIAALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKS 434
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 376 CLLY---EFAMVDNKPKEIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHPGTTA 432
CLL+ + ++ + +E I V + + F+ A ++KELR LD+LL K+ P
Sbjct: 776 CLLFFGGDISIQKDNDQETIAVDEWIIFQSPARIAHLVKELRKELDILLQEKIESPHPVD 835
Query: 433 WGD 435
W D
Sbjct: 836 WKD 838
>gi|472371083|ref|XP_004405046.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 isoform 3
[Odobenus rosmarus divergens]
Length = 982
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 84/169 (49%), Positives = 111/169 (65%), Gaps = 7/169 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I++LH + F S RF IIPLHS++PTV+Q +F P GVRKIV+A
Sbjct: 494 ILVFLPGWDNISTLHDLLMSQVMFKSDRFLIIPLHSLMPTVNQTQVFKRTPPGVRKIVIA 553
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITIDD+VYV+D GK K ++FD ++NI+T+ EW+S ANAKQR+GRAGR
Sbjct: 554 TNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGH 613
Query: 309 ETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC---TTQRPGAILVFL 354
Y ++L D +L +++ + L+ +C R G I FL
Sbjct: 614 CYHLYNGLRASLLDDYQLP----EILRTPLEELCLQIKILRLGGIAYFL 658
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 39/59 (66%)
Query: 26 DPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
D LD +++ +K RY EM R+KLPSY M+ +++M+ N+Q+TVISGETG G
Sbjct: 180 DVTLDQQLLEDLQKKKSDLRYIEMQHFREKLPSYGMQKELVNMIDNHQVTVISGETGCG 238
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Query: 316 DVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
DVL M+ D + V+ ++I +L++HI + GAILVFLPGWD I++LH + F S
Sbjct: 463 DVLEMVDD---DKVDLNLIAALIRHIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKS 519
>gi|466081509|ref|XP_004284550.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 isoform 1
[Orcinus orca]
Length = 921
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 84/169 (49%), Positives = 111/169 (65%), Gaps = 7/169 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I++LH + F S RF IIPLHS++PTV+Q +F P GVRKIV+A
Sbjct: 404 ILVFLPGWDNISTLHDLLMSQVMFKSDRFLIIPLHSLMPTVNQTQVFKRTPPGVRKIVIA 463
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITIDD+VYV+D GK K ++FD ++NI+T+ EW+S ANAKQR+GRAGR
Sbjct: 464 TNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGH 523
Query: 309 ETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC---TTQRPGAILVFL 354
Y ++L D +L +++ + L+ +C R G I FL
Sbjct: 524 CYHLYNGLRASLLDDYQLP----EILRTPLEELCLQIKILRLGGIAYFL 568
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 39/59 (66%)
Query: 26 DPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
D LD +++ +K RY EM R+KLPSY M+ +++M+ N+Q+TV+SGETG G
Sbjct: 90 DVTLDQQLLEDLQKKKTDLRYIEMQHFREKLPSYGMQKELVNMIDNHQVTVVSGETGCG 148
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Query: 316 DVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
DV+ M+ D + V+ ++I +L+++I + GAILVFLPGWD I++LH + F S
Sbjct: 373 DVIGMMDD---DKVDLNLIAALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKS 429
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 376 CLLY---EFAMVDNKPKEIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHPGTTA 432
CLL+ + ++ + +E I V + + F+ A ++KELR LD+LL K+ P
Sbjct: 822 CLLFFGGDISIQKDNDQETIAVDEWIIFQSPARIAHLVKELRKELDILLQEKIESPHPVD 881
Query: 433 WGD 435
W D
Sbjct: 882 WKD 884
>gi|466081515|ref|XP_004284552.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 isoform 3
[Orcinus orca]
Length = 892
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 84/169 (49%), Positives = 111/169 (65%), Gaps = 7/169 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I++LH + F S RF IIPLHS++PTV+Q +F P GVRKIV+A
Sbjct: 404 ILVFLPGWDNISTLHDLLMSQVMFKSDRFLIIPLHSLMPTVNQTQVFKRTPPGVRKIVIA 463
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITIDD+VYV+D GK K ++FD ++NI+T+ EW+S ANAKQR+GRAGR
Sbjct: 464 TNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGH 523
Query: 309 ETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC---TTQRPGAILVFL 354
Y ++L D +L +++ + L+ +C R G I FL
Sbjct: 524 CYHLYNGLRASLLDDYQLP----EILRTPLEELCLQIKILRLGGIAYFL 568
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 39/59 (66%)
Query: 26 DPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
D LD +++ +K RY EM R+KLPSY M+ +++M+ N+Q+TV+SGETG G
Sbjct: 90 DVTLDQQLLEDLQKKKTDLRYIEMQHFREKLPSYGMQKELVNMIDNHQVTVVSGETGCG 148
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Query: 316 DVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
DV+ M+ D + V+ ++I +L+++I + GAILVFLPGWD I++LH + F S
Sbjct: 373 DVIGMMDD---DKVDLNLIAALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKS 429
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 376 CLLY---EFAMVDNKPKEIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHPGTTA 432
CLL+ + ++ + +E I V + + F+ A ++KELR LD+LL K+ P
Sbjct: 793 CLLFFGGDISIQKDNDQETIAVDEWIIFQSPARIAHLVKELRKELDILLQEKIESPHPVD 852
Query: 433 WGD 435
W D
Sbjct: 853 WKD 855
>gi|390352196|ref|XP_792246.3| PREDICTED: probable ATP-dependent RNA helicase DHX36-like
[Strongylocentrotus purpuratus]
Length = 577
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 72/115 (62%), Positives = 91/115 (79%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFL GWD I+ LH + + F+ RF IIPLHSM+PT++Q+ +F PP GVRKI++A
Sbjct: 59 ILVFLQGWDQISKLHDKLTSQTLFSEERFIIIPLHSMMPTINQRHVFEHPPPGVRKIIIA 118
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITIDD+VYVV+ G+ K +NFDV +NI T+K EW+S A+A QRRGRAGR
Sbjct: 119 TNIAETSITIDDVVYVVNLGRVKETNFDVANNIRTMKAEWVSKASAHQRRGRAGR 173
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 385 DNKPKEIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHPGTTAWG-DPNEGNIL 442
D++ E + V D + F C TA ++ +LR LD ++ K+++PG T W +EG ++
Sbjct: 433 DDQGHETVFVDDHIKFHCSQETAHLVIKLREELDRVMEQKITNPGPTNWSPASHEGRVM 491
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 311 QQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQS 370
+ Y V++ L + ++ D+ LL++I + GAILVFL GWD I+ LH +
Sbjct: 20 ETYSEQVVDTLSSMDHNVLDLDLTAELLRYISLQKPEGAILVFLQGWDQISKLHDKLTSQ 79
Query: 371 SFFN 374
+ F+
Sbjct: 80 TLFS 83
>gi|344288908|ref|XP_003416188.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 isoform 1
[Loxodonta africana]
Length = 1011
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 84/169 (49%), Positives = 111/169 (65%), Gaps = 7/169 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I+SLH + F S +F IIPLHS++PTV+Q +F P GVRKIV+A
Sbjct: 494 ILVFLPGWDNISSLHDLLMSQVMFKSDKFLIIPLHSLMPTVNQTQVFKKTPPGVRKIVIA 553
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITIDD+VYV+D GK K ++FD ++NI+T+ EW+S ANAKQR+GRAGR
Sbjct: 554 TNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGH 613
Query: 309 ETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC---TTQRPGAILVFL 354
Y ++L D +L +++ + L+ +C R G I FL
Sbjct: 614 CYHLYNGLRASLLDDYQLP----EILRTPLEELCLQIKILRLGGIAYFL 658
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Query: 316 DVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
DVL M+ D + V+ ++I +L++HI + GAILVFLPGWD I+SLH + F S
Sbjct: 463 DVLEMMDD---DKVDLNLIAALIRHIVLEEEDGAILVFLPGWDNISSLHDLLMSQVMFKS 519
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 38/59 (64%)
Query: 26 DPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
D LD +++ RK RY EM R+KLPS+ M+ ++ ++ N+Q+TVISGETG G
Sbjct: 180 DITLDRQLLEDLQRKKTEPRYIEMQHFREKLPSHGMQKELVSLIANHQVTVISGETGCG 238
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 376 CLLY---EFAMVDNKPKEIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHPGTTA 432
CLL+ + ++ + +E I V + + F+ A ++KELR LD+LL K+ P
Sbjct: 912 CLLFFGGDISIQKDDDQETIAVDEWIVFQSPARIAHLVKELRKELDVLLQEKIESPHPVD 971
Query: 433 WGD 435
W D
Sbjct: 972 WND 974
>gi|410971146|ref|XP_003992034.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 isoform 2
[Felis catus]
Length = 983
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 84/169 (49%), Positives = 111/169 (65%), Gaps = 7/169 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I++LH + F S RF IIPLHS++PTV+Q +F P GVRKIV+A
Sbjct: 495 ILVFLPGWDNISTLHDLLMSQVMFKSDRFIIIPLHSLMPTVNQTQVFKRTPPGVRKIVIA 554
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITIDD+VYV+D GK K ++FD ++NI+T+ EW+S ANAKQR+GRAGR
Sbjct: 555 TNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGH 614
Query: 309 ETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC---TTQRPGAILVFL 354
Y ++L D +L +++ + L+ +C R G I FL
Sbjct: 615 CYHLYNGLRASLLDDYQLP----EILRTPLEELCLQIKILRLGGIAYFL 659
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 39/59 (66%)
Query: 26 DPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
D LD +++ +K RY EM R+KLPSY M+ +++M+ N+Q+TVISGETG G
Sbjct: 181 DVTLDQQLLEDLQKKKSDPRYIEMQHFREKLPSYGMQKELVNMIDNHQVTVISGETGCG 239
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Query: 316 DVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
DVL M+ D + V+ ++I +L++HI + GAILVFLPGWD I++LH + F S
Sbjct: 464 DVLEMIDD---DKVDLNLIAALIRHIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKS 520
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 376 CLLY---EFAMVDNKPKEIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHPGTTA 432
CLL+ + ++ + +E I V + + F+ A ++KELR LD+LL K+ P
Sbjct: 884 CLLFFGGDISIQKDNDQETIAVDEWIVFQSPARIAHLVKELRKELDILLQEKIESPHPVD 943
Query: 433 WGD 435
W D
Sbjct: 944 WKD 946
>gi|410971144|ref|XP_003992033.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 isoform 1
[Felis catus]
Length = 1012
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 84/169 (49%), Positives = 111/169 (65%), Gaps = 7/169 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I++LH + F S RF IIPLHS++PTV+Q +F P GVRKIV+A
Sbjct: 495 ILVFLPGWDNISTLHDLLMSQVMFKSDRFIIIPLHSLMPTVNQTQVFKRTPPGVRKIVIA 554
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITIDD+VYV+D GK K ++FD ++NI+T+ EW+S ANAKQR+GRAGR
Sbjct: 555 TNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGH 614
Query: 309 ETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC---TTQRPGAILVFL 354
Y ++L D +L +++ + L+ +C R G I FL
Sbjct: 615 CYHLYNGLRASLLDDYQLP----EILRTPLEELCLQIKILRLGGIAYFL 659
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 39/59 (66%)
Query: 26 DPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
D LD +++ +K RY EM R+KLPSY M+ +++M+ N+Q+TVISGETG G
Sbjct: 181 DVTLDQQLLEDLQKKKSDPRYIEMQHFREKLPSYGMQKELVNMIDNHQVTVISGETGCG 239
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Query: 316 DVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
DVL M+ D + V+ ++I +L++HI + GAILVFLPGWD I++LH + F S
Sbjct: 464 DVLEMIDD---DKVDLNLIAALIRHIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKS 520
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 376 CLLY---EFAMVDNKPKEIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHPGTTA 432
CLL+ + ++ + +E I V + + F+ A ++KELR LD+LL K+ P
Sbjct: 913 CLLFFGGDISIQKDNDQETIAVDEWIVFQSPARIAHLVKELRKELDILLQEKIESPHPVD 972
Query: 433 WGD 435
W D
Sbjct: 973 WKD 975
>gi|410909916|ref|XP_003968436.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Takifugu
rubripes]
Length = 1046
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 74/115 (64%), Positives = 92/115 (80%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I+SL+ + F S RF IIPLHS++PTV+Q +F PP GVRKIV+A
Sbjct: 521 ILVFLPGWDGISSLNDLLMAQQMFRSDRFVIIPLHSLMPTVNQTQVFKRPPPGVRKIVIA 580
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITIDD+V+V+D GK K ++FD +NI+T+ EW+SLANAKQR+GRAGR
Sbjct: 581 TNIAETSITIDDVVFVIDGGKIKETHFDTNNNISTMTEEWVSLANAKQRKGRAGR 635
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 40/56 (71%)
Query: 29 LDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
LD K++++ K +Y+EML+ R+KLPSY ++ ++ ++ +N++ V+SGETG G
Sbjct: 209 LDDRLKRDLLEKKSEPKYKEMLQFREKLPSYGKKEDLMALINSNRVVVVSGETGCG 264
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 7/76 (9%)
Query: 302 GRTLKRSETQQYPNDVLNMLK--DPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDT 359
RTLK +Y +D + ++ D + E ++ +I SL++H+ + GAILVFLPGWD
Sbjct: 476 ARTLK----DRYSDDTVQAVEMLDSD-EKIDLQLIVSLIRHVVLNEGEGAILVFLPGWDG 530
Query: 360 INSLHRSMCQSSFFNS 375
I+SL+ + F S
Sbjct: 531 ISSLNDLLMAQQMFRS 546
>gi|345483837|ref|XP_001604337.2| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Nasonia
vitripennis]
Length = 985
Score = 161 bits (407), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 85/198 (42%), Positives = 112/198 (56%), Gaps = 50/198 (25%)
Query: 106 VLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVYCTYTFMGVSPMKVFFCKNVLQRL 165
VL L++P E ++ D+I L +HIC T+ PGA
Sbjct: 431 VLEQLRNPATEDLSFDLICELTKHICLTKGPGA--------------------------- 463
Query: 166 MKGVGANSPKRWVKLLRSMLVVPILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSM 225
IL+FLPG IN ++R + + F R+ I PLHS
Sbjct: 464 -----------------------ILIFLPGLMDINKVNRMLLECGSFPRDRYVIYPLHSR 500
Query: 226 LPTVSQKSIFNTPPEGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLK 285
+PTV QK IF PPEGVRKI++AT IAETSITI+D+VYV+DCGKTK+S FD+ +N+ TL+
Sbjct: 501 MPTVDQKCIFEVPPEGVRKIIIATVIAETSITIEDVVYVIDCGKTKISKFDIANNLQTLE 560
Query: 286 PEWISLANAKQRRGRAGR 303
EW+S ANA+QR+GRAGR
Sbjct: 561 QEWVSEANARQRKGRAGR 578
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 389 KEIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHPGTTAWGDPNEGNILHC 444
+ +ITV + LSF C+P TAKII++L + D LL K++HPGT WG +EGN+L+
Sbjct: 896 QSVITVANNLSFLCEPRTAKIIQKLHEKFDCLLEFKITHPGTINWG-AHEGNVLNA 950
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 37/57 (64%)
Query: 317 VLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFF 373
VL L++P E ++ D+I L +HIC T+ PGAIL+FLPG IN ++R + + F
Sbjct: 431 VLEQLRNPATEDLSFDLICELTKHICLTKGPGAILIFLPGLMDINKVNRMLLECGSF 487
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 39/63 (61%)
Query: 22 KLLNDPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGET 81
KL D +D E+ S +Y+ ML+ R KLP+Y+ R +LD++ +NQ+ +ISGET
Sbjct: 149 KLQRDENMDIRLLDELNTIKASFQYRNMLKFRAKLPAYEKRHEILDLIYSNQVVLISGET 208
Query: 82 GSG 84
G G
Sbjct: 209 GCG 211
>gi|240848573|ref|NP_082412.2| probable ATP-dependent RNA helicase DHX36 [Mus musculus]
gi|408360071|sp|Q8VHK9.2|DHX36_MOUSE RecName: Full=Probable ATP-dependent RNA helicase DHX36; AltName:
Full=DEAH box protein 36; AltName: Full=MLE-like protein
1; AltName: Full=RNA helicase associated with AU-rich
element ARE
gi|148703437|gb|EDL35384.1| DEAH (Asp-Glu-Ala-His) box polypeptide 36, isoform CRA_a [Mus
musculus]
Length = 1001
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 83/169 (49%), Positives = 111/169 (65%), Gaps = 7/169 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I++LH + F S +F IIPLHS++PTV+Q +F P GVRKIV+A
Sbjct: 484 ILVFLPGWDNISTLHDLLMSQVMFKSDKFLIIPLHSLMPTVNQTQVFKKTPPGVRKIVIA 543
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITIDD+VYV+D GK K ++FD ++NI+T+ EW+S ANAKQR+GRAGR
Sbjct: 544 TNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGH 603
Query: 309 ETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC---TTQRPGAILVFL 354
Y ++L D +L +++ + L+ +C R G I FL
Sbjct: 604 CYHLYNGLRASLLDDYQLP----EILRTPLEELCLQIKILRLGGIAYFL 648
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 41/62 (66%), Gaps = 2/62 (3%)
Query: 25 NDP--VLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETG 82
N+P LD +++ RK RY EM RKKLPSY M+ +++++ N+Q+TVISGETG
Sbjct: 167 NEPNLSLDQHLLEDLQRKKTDPRYIEMQRFRKKLPSYGMQKELVNLINNHQVTVISGETG 226
Query: 83 SG 84
G
Sbjct: 227 CG 228
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Query: 316 DVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
DVL M+ D + V+ ++I +L+++I + GAILVFLPGWD I++LH + F S
Sbjct: 453 DVLQMMDD---DKVDLNLIAALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKS 509
>gi|17863988|gb|AAL47006.1|AF448804_1 DEAD/H box polypeptide 36 protein [Mus musculus]
Length = 1001
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 83/169 (49%), Positives = 111/169 (65%), Gaps = 7/169 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I++LH + F S +F IIPLHS++PTV+Q +F P GVRKIV+A
Sbjct: 484 ILVFLPGWDNISTLHDLLMSQVMFKSDKFLIIPLHSLMPTVNQTQVFKKTPPGVRKIVIA 543
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITIDD+VYV+D GK K ++FD ++NI+T+ EW+S ANAKQR+GRAGR
Sbjct: 544 TNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGH 603
Query: 309 ETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC---TTQRPGAILVFL 354
Y ++L D +L +++ + L+ +C R G I FL
Sbjct: 604 CYHLYNGLRASLLDDYQLP----EILRTPLEELCLQIKILRLGGIAYFL 648
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 41/62 (66%), Gaps = 2/62 (3%)
Query: 25 NDP--VLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETG 82
N+P LD +++ RK RY EM RKKLPSY M+ +++++ N+Q+TVISGETG
Sbjct: 167 NEPNLSLDQHLLEDLQRKKTDPRYIEMQRFRKKLPSYGMQKELVNLINNHQVTVISGETG 226
Query: 83 SG 84
G
Sbjct: 227 CG 228
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Query: 316 DVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
DVL M+ D + V+ ++I +L+++I + GAILVFLPGWD I++LH + F S
Sbjct: 453 DVLQMMDD---DKVDLNLIAALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKS 509
>gi|390331935|ref|XP_001199419.2| PREDICTED: probable ATP-dependent RNA helicase DHX36-like
[Strongylocentrotus purpuratus]
Length = 790
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 72/115 (62%), Positives = 91/115 (79%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I+ LH + + F+ RF IIPLHSM+PT++Q+ +F P GVRKI++A
Sbjct: 204 ILVFLPGWDQISKLHDKLTSQTLFSEERFIIIPLHSMMPTINQRQVFEHPLPGVRKIIIA 263
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITIDD+VYVV+ G+ K +NFDV +NI T+K EW+S A+A QRRGRAGR
Sbjct: 264 TNIAETSITIDDVVYVVNLGRVKETNFDVANNIRTMKAEWVSKASAHQRRGRAGR 318
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 36/64 (56%)
Query: 311 QQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQS 370
+ Y V++ L + ++ D+ LL++I + GAILVFLPGWD I+ LH +
Sbjct: 165 ETYSEQVVDTLSSMDHNVLDLDLTAELLRYISLQKPEGAILVFLPGWDQISKLHDKLTSQ 224
Query: 371 SFFN 374
+ F+
Sbjct: 225 TLFS 228
Score = 43.5 bits (101), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 385 DNKPKEIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHPGTTAWG-DPNEGNILH 443
D++ E + V D + F C TA ++ +LR LD ++ K+++PG T W +EG ++
Sbjct: 636 DDQGHETVFVDDHIKFHCSQETAHLVIKLREELDRVMEQKITNPGPTNWSPASHEGRVMR 695
Query: 444 C 444
Sbjct: 696 A 696
>gi|187950903|gb|AAI38062.1| Dhx36 protein [Mus musculus]
Length = 1000
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 83/169 (49%), Positives = 111/169 (65%), Gaps = 7/169 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I++LH + F S +F IIPLHS++PTV+Q +F P GVRKIV+A
Sbjct: 483 ILVFLPGWDNISTLHDLLMSQVMFKSDKFLIIPLHSLMPTVNQTQVFKKTPPGVRKIVIA 542
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITIDD+VYV+D GK K ++FD ++NI+T+ EW+S ANAKQR+GRAGR
Sbjct: 543 TNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGH 602
Query: 309 ETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC---TTQRPGAILVFL 354
Y ++L D +L +++ + L+ +C R G I FL
Sbjct: 603 CYHLYNGLRASLLDDYQLP----EILRTPLEELCLQIKILRLGGIAYFL 647
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 41/62 (66%), Gaps = 2/62 (3%)
Query: 25 NDP--VLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETG 82
N+P LD +++ RK RY EM RKKLPSY M+ +++++ N+Q+TVISGETG
Sbjct: 166 NEPNLSLDQHLLEDLQRKKTDPRYIEMQRFRKKLPSYGMQKELVNLINNHQVTVISGETG 225
Query: 83 SG 84
G
Sbjct: 226 CG 227
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Query: 316 DVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
DVL M+ D + V+ ++I +L+++I + GAILVFLPGWD I++LH + F S
Sbjct: 452 DVLQMMDD---DKVDLNLIAALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKS 508
>gi|12850145|dbj|BAB28610.1| unnamed protein product [Mus musculus]
Length = 681
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 83/169 (49%), Positives = 111/169 (65%), Gaps = 7/169 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I++LH + F S +F IIPLHS++PTV+Q +F P GVRKIV+A
Sbjct: 164 ILVFLPGWDNISTLHDLLMSQVMFKSDKFLIIPLHSLMPTVNQTQVFKKTPPGVRKIVIA 223
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITIDD+VYV+D GK K ++FD ++NI+T+ EW+S ANAKQR+GRAGR
Sbjct: 224 TNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGH 283
Query: 309 ETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC---TTQRPGAILVFL 354
Y ++L D +L +++ + L+ +C R G I FL
Sbjct: 284 CYHLYNGLRASLLDDYQLP----EILRTPLEELCLQIKILRLGGIAYFL 328
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Query: 316 DVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
DVL M+ D + V+ ++I +L+++I + GAILVFLPGWD I++LH + F S
Sbjct: 133 DVLQMMDD---DKVDLNLIAALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKS 189
>gi|221044708|dbj|BAH14031.1| unnamed protein product [Homo sapiens]
Length = 873
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 83/169 (49%), Positives = 111/169 (65%), Gaps = 7/169 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I++LH + F S +F IIPLHS++PTV+Q +F P GVRKIV+A
Sbjct: 405 ILVFLPGWDNISTLHDLLMSQVMFKSDKFLIIPLHSLMPTVNQTQVFKRTPPGVRKIVIA 464
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITIDD+VYV+D GK K ++FD ++NI+T+ EW+S ANAKQR+GRAGR
Sbjct: 465 TNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGH 524
Query: 309 ETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC---TTQRPGAILVFL 354
Y ++L D +L +++ + L+ +C R G I FL
Sbjct: 525 CYHLYNGLRASLLDDYQLP----EILRTPLEELCLQIKILRLGGIAYFL 569
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 39/59 (66%)
Query: 26 DPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
D LD +++ +K RY EM R+KLPSY M+ +++++ N+Q+TVISGETG G
Sbjct: 91 DGTLDQKLLEDLQKKKNDLRYIEMQHFREKLPSYGMQKELVNLIDNHQVTVISGETGCG 149
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Query: 316 DVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
DV+ M++D + V+ ++I +L+++I + GAILVFLPGWD I++LH + F S
Sbjct: 374 DVIEMMED---DKVDLNLIVALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKS 430
>gi|507672380|ref|XP_004709081.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DHX36 [Echinops telfairi]
Length = 922
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 83/169 (49%), Positives = 111/169 (65%), Gaps = 7/169 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I+SLH + F S +F IIPLHS++PT++Q +F P GVRKIV+A
Sbjct: 405 ILVFLPGWDNISSLHDLLMSQVMFKSDKFLIIPLHSLMPTINQTQVFKKTPPGVRKIVIA 464
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITIDD+VYV+D GK K ++FD ++NI+T+ EW+S ANAKQR+GRAGR
Sbjct: 465 TNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSTEWVSKANAKQRKGRAGRVQPGH 524
Query: 309 ETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC---TTQRPGAILVFL 354
Y ++L D +L +++ + L+ +C R G I FL
Sbjct: 525 CYHLYNGLRASLLDDYQLP----EILRTPLEELCLQIKILRLGGIAYFL 569
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 41/62 (66%), Gaps = 2/62 (3%)
Query: 25 NDP--VLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETG 82
N+P LD +++ RK RY EM R+KLPSY M+ ++D++ NNQ+TVISGETG
Sbjct: 88 NEPNVTLDQQLLEDLQRKKTDPRYIEMQHFREKLPSYGMQKELVDLIANNQVTVISGETG 147
Query: 83 SG 84
G
Sbjct: 148 CG 149
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 46/94 (48%), Gaps = 14/94 (14%)
Query: 282 ATLKPEWISLANAKQRRGRAGRTLKRSETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHI 341
A K W +RR AG DVL M+ D E V+ ++I +L++HI
Sbjct: 351 AIYKERWPDYVRELRRRYSAGTI-----------DVLEMVDD---EKVDLNLIAALIRHI 396
Query: 342 CTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
+ GAILVFLPGWD I+SLH + F S
Sbjct: 397 VLEEEDGAILVFLPGWDNISSLHDLLMSQVMFKS 430
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 376 CLLY---EFAMVDNKPKEIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHPGTTA 432
CLL+ + ++ + +E I V + + F+ A ++KELR LD+LL K+ +P
Sbjct: 823 CLLFFGGDISIQKDNDQETIAVDEWIIFQSPARIAHLVKELRKELDVLLQEKIENPHPVD 882
Query: 433 WGD 435
W D
Sbjct: 883 WKD 885
>gi|344257081|gb|EGW13185.1| putative ATP-dependent RNA helicase DHX36 [Cricetulus griseus]
Length = 922
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 83/169 (49%), Positives = 111/169 (65%), Gaps = 7/169 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I++LH + F S +F IIPLHS++PTV+Q +F P GVRKIV+A
Sbjct: 405 ILVFLPGWDNISTLHDLLMSQVMFKSDKFIIIPLHSLMPTVNQTQVFKKTPPGVRKIVIA 464
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITIDD+VYV+D GK K ++FD ++NI+T+ EW+S ANAKQR+GRAGR
Sbjct: 465 TNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGH 524
Query: 309 ETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC---TTQRPGAILVFL 354
Y ++L D +L +++ + L+ +C R G I FL
Sbjct: 525 CYHLYNGLRASLLDDYQLP----EILRTPLEELCLQIKILRLGGIAYFL 569
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 38/56 (67%)
Query: 29 LDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
LD +++ +K RY EM RKKLPSY M+ +++++ N+Q+TVISGETG G
Sbjct: 94 LDQQLLEDLQKKKTDPRYIEMQHFRKKLPSYGMQKELVNLINNHQVTVISGETGCG 149
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 40/64 (62%)
Query: 312 QYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSS 371
+Y +++L+ + + V+ ++I +L+++I + GAILVFLPGWD I++LH +
Sbjct: 367 RYSASTVDVLERMDDDKVDLNLIAALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQV 426
Query: 372 FFNS 375
F S
Sbjct: 427 MFKS 430
>gi|524956025|ref|XP_005077983.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 isoform X1
[Mesocricetus auratus]
Length = 999
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 83/169 (49%), Positives = 111/169 (65%), Gaps = 7/169 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I++LH + F S +F IIPLHS++PTV+Q +F P GVRKIV+A
Sbjct: 482 ILVFLPGWDNISTLHDLLMSQVMFKSDKFIIIPLHSLMPTVNQTQVFKKTPPGVRKIVIA 541
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITIDD+VYV+D GK K ++FD ++NI+T+ EW+S ANAKQR+GRAGR
Sbjct: 542 TNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGH 601
Query: 309 ETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC---TTQRPGAILVFL 354
Y ++L D +L +++ + L+ +C R G I FL
Sbjct: 602 CYHLYNGLRASLLDDYQLP----EILRTPLEELCLQIKILRLGGIAYFL 646
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 38/56 (67%)
Query: 29 LDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
LD +++ +K RY EM RKKLPSY M+ +++++ N+Q+TVISGETG G
Sbjct: 171 LDQQLLEDLQKKKADPRYIEMQHFRKKLPSYGMQKELVNLISNHQVTVISGETGCG 226
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 40/64 (62%)
Query: 312 QYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSS 371
+Y +++L+ + + V+ ++I +L+++I + GAILVFLPGWD I++LH +
Sbjct: 444 RYSASTVDVLERMDDDKVDLNLIAALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQV 503
Query: 372 FFNS 375
F S
Sbjct: 504 MFKS 507
>gi|11526793|gb|AAG36783.1| MLEL1 protein [Homo sapiens]
gi|40644063|emb|CAE11802.1| putative DExH/D RNA helicase [Homo sapiens]
Length = 1008
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 83/169 (49%), Positives = 111/169 (65%), Gaps = 7/169 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I++LH + F S +F IIPLHS++PTV+Q +F P GVRKIV+A
Sbjct: 491 ILVFLPGWDNISTLHDLLMSQVMFKSDKFLIIPLHSLMPTVNQTQVFKRTPPGVRKIVIA 550
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITIDD+VYV+D GK K ++FD ++NI+T+ EW+S ANAKQR+GRAGR
Sbjct: 551 TNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGH 610
Query: 309 ETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC---TTQRPGAILVFL 354
Y ++L D +L +++ + L+ +C R G I FL
Sbjct: 611 CYHLYNGLRASLLDDYQLP----EILRTPLEELCLQIKILRLGGIAYFL 655
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 39/59 (66%)
Query: 26 DPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
D LD +++ +K RY EM R+KLPSY M+ +++++ N+Q+TVISGETG G
Sbjct: 177 DGTLDQKLLEDLQKKKNDLRYIEMQHFREKLPSYGMQKELVNLIDNHQVTVISGETGCG 235
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Query: 316 DVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
DV+ M++D + V+ ++I +L+++I + GAILVFLPGWD I++LH + F S
Sbjct: 460 DVIEMMED---DKVDLNLIVALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKS 516
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 376 CLLY---EFAMVDNKPKEIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHPGTTA 432
CLL+ + ++ + +E I V + + F+ A ++KELR LD+LL K+ P
Sbjct: 909 CLLFFGGDISIQKDNDQETIAVDEWIVFQSPARIAHLVKELRKELDILLQEKIESPHPVD 968
Query: 433 WGD 435
W D
Sbjct: 969 WND 971
>gi|296227769|ref|XP_002759520.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 isoform 2
[Callithrix jacchus]
Length = 1010
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 83/169 (49%), Positives = 111/169 (65%), Gaps = 7/169 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I++LH + F S +F IIPLHS++PTV+Q +F P GVRKIV+A
Sbjct: 493 ILVFLPGWDNISTLHDLLMSQVMFKSDKFLIIPLHSLMPTVNQTQVFKRTPPGVRKIVIA 552
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITIDD+VYV+D GK K ++FD ++NI+T+ EW+S ANAKQR+GRAGR
Sbjct: 553 TNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSQANAKQRKGRAGRVQPGH 612
Query: 309 ETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC---TTQRPGAILVFL 354
Y ++L D +L +++ + L+ +C R G I FL
Sbjct: 613 CYHLYNGLRASLLDDYQLP----EILRTPLEELCLQIKILRLGGIAYFL 657
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 39/59 (66%)
Query: 26 DPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
D LD +++ +K RY EM R+KLPSY M+ +++++ N+Q+TVISGETG G
Sbjct: 179 DGTLDQQLLEDLQKKKNDLRYIEMQHFREKLPSYGMQKELVNLIDNHQVTVISGETGCG 237
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Query: 316 DVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
DV+ M+ D + V+ ++I +L+++I + GAILVFLPGWD I++LH + F S
Sbjct: 462 DVIEMMDD---DKVDLNLIVALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKS 518
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 376 CLLY---EFAMVDNKPKEIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHPGTTA 432
CLL+ + ++ + +E I V + + F+ A ++KELR LD+LL K+ +P
Sbjct: 911 CLLFFGGDISIQKDNDQETIAVDEWIIFQSPARIAHLVKELRKELDILLQEKIENPHPVD 970
Query: 433 WGD 435
W D
Sbjct: 971 WND 973
>gi|291400034|ref|XP_002716350.1| PREDICTED: DEAH (Asp-Glu-Ala-His) box polypeptide 36 isoform 1
[Oryctolagus cuniculus]
Length = 1004
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 83/169 (49%), Positives = 111/169 (65%), Gaps = 7/169 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I++LH + F S +F IIPLHS++PTV+Q +F P GVRKIV+A
Sbjct: 487 ILVFLPGWDNISTLHDLLMSQVMFKSDKFLIIPLHSLMPTVNQTQVFKKTPPGVRKIVIA 546
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITIDD+VYV+D GK K ++FD ++NI+T+ EW+S ANAKQR+GRAGR
Sbjct: 547 TNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMTAEWVSKANAKQRKGRAGRVQPGH 606
Query: 309 ETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC---TTQRPGAILVFL 354
Y ++L D +L +++ + L+ +C R G I FL
Sbjct: 607 CYHLYNGLRASLLDDYQLP----EILRTPLEELCLQIKILRLGGIAYFL 651
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 40/59 (67%)
Query: 26 DPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
D LD +++ +K RY EM + R+KLPSY M+ +++++ N+Q+TVISGETG G
Sbjct: 173 DVTLDQQLLEDLQKKKTDLRYIEMQQFREKLPSYGMQKELVNLIDNHQVTVISGETGCG 231
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Query: 316 DVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
DVL M+ D + V+ ++I +L+++I + GAILVFLPGWD I++LH + F S
Sbjct: 456 DVLEMMDD---DKVDLNLIAALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKS 512
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 376 CLLY---EFAMVDNKPKEIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHPGTTA 432
CLL+ + ++ + +E I V + + F+ A ++KELR LD+LL K+ P
Sbjct: 905 CLLFFGGDISIQKDNDQETIAVDEWIVFQSPARIAHLVKELRKELDILLQEKIESPQPVD 964
Query: 433 WGD 435
W D
Sbjct: 965 WKD 967
>gi|114589924|ref|XP_001147527.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 isoform 5 [Pan
troglodytes]
Length = 979
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 83/169 (49%), Positives = 111/169 (65%), Gaps = 7/169 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I++LH + F S +F IIPLHS++PTV+Q +F P GVRKIV+A
Sbjct: 491 ILVFLPGWDNISTLHDLLMSQVMFKSDKFLIIPLHSLMPTVNQTQVFKRTPPGVRKIVIA 550
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITIDD+VYV+D GK K ++FD ++NI+T+ EW+S ANAKQR+GRAGR
Sbjct: 551 TNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGH 610
Query: 309 ETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC---TTQRPGAILVFL 354
Y ++L D +L +++ + L+ +C R G I FL
Sbjct: 611 CYHLYNGLRASLLDDYQLP----EILRTPLEELCLQIKILRLGGIAYFL 655
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 39/59 (66%)
Query: 26 DPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
D LD +++ +K RY EM R+KLPSY M+ +++++ N+Q+TVISGETG G
Sbjct: 177 DGTLDQKLLEDLQKKKNDLRYIEMQHFREKLPSYGMQKELVNLIDNHQVTVISGETGCG 235
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Query: 316 DVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
DV+ M++D + V+ ++I +L+++I + GAILVFLPGWD I++LH + F S
Sbjct: 460 DVIEMMED---DKVDLNLIVALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKS 516
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 376 CLLY---EFAMVDNKPKEIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHPGTTA 432
CLL+ + ++ + +E I V + + F+ A ++KELR LD+LL K+ P
Sbjct: 880 CLLFFGGDISIQKDNDQETIAVDEWIVFQSPARIAHLVKELRKELDILLQEKIESPHPVD 939
Query: 433 WGD 435
W D
Sbjct: 940 WND 942
>gi|354491883|ref|XP_003508083.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 [Cricetulus
griseus]
Length = 958
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 83/169 (49%), Positives = 111/169 (65%), Gaps = 7/169 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I++LH + F S +F IIPLHS++PTV+Q +F P GVRKIV+A
Sbjct: 441 ILVFLPGWDNISTLHDLLMSQVMFKSDKFIIIPLHSLMPTVNQTQVFKKTPPGVRKIVIA 500
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITIDD+VYV+D GK K ++FD ++NI+T+ EW+S ANAKQR+GRAGR
Sbjct: 501 TNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGH 560
Query: 309 ETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC---TTQRPGAILVFL 354
Y ++L D +L +++ + L+ +C R G I FL
Sbjct: 561 CYHLYNGLRASLLDDYQLP----EILRTPLEELCLQIKILRLGGIAYFL 605
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 38/56 (67%)
Query: 29 LDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
LD +++ +K RY EM RKKLPSY M+ +++++ N+Q+TVISGETG G
Sbjct: 130 LDQQLLEDLQKKKTDPRYIEMQHFRKKLPSYGMQKELVNLINNHQVTVISGETGCG 185
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 40/64 (62%)
Query: 312 QYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSS 371
+Y +++L+ + + V+ ++I +L+++I + GAILVFLPGWD I++LH +
Sbjct: 403 RYSASTVDVLERMDDDKVDLNLIAALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQV 462
Query: 372 FFNS 375
F S
Sbjct: 463 MFKS 466
>gi|167830433|ref|NP_065916.2| probable ATP-dependent RNA helicase DHX36 isoform 1 [Homo sapiens]
gi|313104099|sp|Q9H2U1.2|DHX36_HUMAN RecName: Full=Probable ATP-dependent RNA helicase DHX36; AltName:
Full=DEAH box protein 36; AltName: Full=MLE-like protein
1; AltName: Full=RNA helicase associated with AU-rich
element ARE
gi|119599167|gb|EAW78761.1| DEAH (Asp-Glu-Ala-His) box polypeptide 36, isoform CRA_a [Homo
sapiens]
gi|189069381|dbj|BAG37047.1| unnamed protein product [Homo sapiens]
Length = 1008
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 83/169 (49%), Positives = 111/169 (65%), Gaps = 7/169 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I++LH + F S +F IIPLHS++PTV+Q +F P GVRKIV+A
Sbjct: 491 ILVFLPGWDNISTLHDLLMSQVMFKSDKFLIIPLHSLMPTVNQTQVFKRTPPGVRKIVIA 550
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITIDD+VYV+D GK K ++FD ++NI+T+ EW+S ANAKQR+GRAGR
Sbjct: 551 TNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGH 610
Query: 309 ETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC---TTQRPGAILVFL 354
Y ++L D +L +++ + L+ +C R G I FL
Sbjct: 611 CYHLYNGLRASLLDDYQLP----EILRTPLEELCLQIKILRLGGIAYFL 655
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 39/59 (66%)
Query: 26 DPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
D LD +++ +K RY EM R+KLPSY M+ +++++ N+Q+TVISGETG G
Sbjct: 177 DGTLDQKLLEDLQKKKNDLRYIEMQHFREKLPSYGMQKELVNLIDNHQVTVISGETGCG 235
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Query: 316 DVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
DV+ M++D + V+ ++I +L+++I + GAILVFLPGWD I++LH + F S
Sbjct: 460 DVIEMMED---DKVDLNLIVALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKS 516
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 376 CLLY---EFAMVDNKPKEIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHPGTTA 432
CLL+ + ++ + +E I V + + F+ A ++KELR LD+LL K+ P
Sbjct: 909 CLLFFGGDISIQKDNDQETIAVDEWIVFQSPARIAHLVKELRKELDILLQEKIESPHPVD 968
Query: 433 WGD 435
W D
Sbjct: 969 WND 971
>gi|307169079|gb|EFN61923.1| Probable ATP-dependent RNA helicase DHX36 [Camponotus floridanus]
Length = 962
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 85/213 (39%), Positives = 122/213 (57%), Gaps = 51/213 (23%)
Query: 91 FITLKRSETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVYCTYTFMGV 150
+I R+E + Y VL+ L++P E ++ ++I L+++IC ++PGA
Sbjct: 407 YIQQLRAEVK-YAEHVLSELRNPNSENLSLELIEKLVRYICNNKQPGA------------ 453
Query: 151 SPMKVFFCKNVLQRLMKGVGANSPKRWVKLLRSMLVVPILVFLPGWDTINSLHRSMCQSS 210
IL+FLPG I+ L++ M +S
Sbjct: 454 --------------------------------------ILIFLPGMMDISQLNKMMLESG 475
Query: 211 FFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLATNIAETSITIDDIVYVVDCGKT 270
+ +++ I PLHS +PT+ QK IF PP+ +RKI++AT+IAETSITI+D+VYV+DCGKT
Sbjct: 476 CYPPNKYIIYPLHSRMPTIDQKLIFKEPPDDIRKIIIATSIAETSITIEDVVYVIDCGKT 535
Query: 271 KMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
K+ FD+ NI TL PEW+SLANAKQRRGRAGR
Sbjct: 536 KLGRFDIAHNIQTLNPEWVSLANAKQRRGRAGR 568
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 312 QYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSS 371
+Y VL+ L++P E ++ ++I L+++IC ++PGAIL+FLPG I+ L++ M +S
Sbjct: 416 KYAEHVLSELRNPNSENLSLELIEKLVRYICNNKQPGAILIFLPGMMDISQLNKMMLESG 475
Query: 372 FF--NSCLLY 379
+ N ++Y
Sbjct: 476 CYPPNKYIIY 485
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 35/63 (55%)
Query: 22 KLLNDPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGET 81
KL + +D E K Y ML+ R+KLP Y + +L ++++NQ+ VISGET
Sbjct: 137 KLQRNSNMDTILLNEYKDKQIQDNYLNMLKFRQKLPVYHKKSEILQLIKDNQVIVISGET 196
Query: 82 GSG 84
G G
Sbjct: 197 GCG 199
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 402 CKPSTAKIIKELRARLDMLLAHKLSHPGTTAWGDPNEGNILHC 444
C+ TA++I+EL+ L+ LL +K++HP T W EG IL+
Sbjct: 897 CESQTAEVIQELQHALNCLLEYKITHPATVLWSS-FEGQILNA 938
>gi|397512310|ref|XP_003826492.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DHX36 [Pan paniscus]
Length = 1010
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 83/169 (49%), Positives = 111/169 (65%), Gaps = 7/169 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I++LH + F S +F IIPLHS++PTV+Q +F P GVRKIV+A
Sbjct: 493 ILVFLPGWDNISTLHDLLMSQVMFKSDKFLIIPLHSLMPTVNQTQVFKRTPPGVRKIVIA 552
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITIDD+VYV+D GK K ++FD ++NI+T+ EW+S ANAKQR+GRAGR
Sbjct: 553 TNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGH 612
Query: 309 ETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC---TTQRPGAILVFL 354
Y ++L D +L +++ + L+ +C R G I FL
Sbjct: 613 CYHLYNGLRASLLDDYQLP----EILRTPLEELCLQIKILRLGGIAYFL 657
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 38/59 (64%)
Query: 26 DPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
D LD +++ + RY EM R+KLPSY M+ +++++ N+Q+TVISGETG G
Sbjct: 179 DGTLDQKLLEDLQKXKNDLRYIEMQHFREKLPSYGMQKELVNLIDNHQVTVISGETGCG 237
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Query: 316 DVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
DV+ M++D + V+ ++I +L+++I + GAILVFLPGWD I++LH + F S
Sbjct: 462 DVIEMMED---DKVDLNLIVALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKS 518
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 376 CLLY---EFAMVDNKPKEIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHPGTTA 432
CLL+ + ++ + +E I V + + F+ A ++KELR LD+LL K+ P
Sbjct: 911 CLLFFGGDISIQKDNDQETIAVDEWIVFQSPARIAHLVKELRKELDILLQEKIESPHPVD 970
Query: 433 WGD 435
W D
Sbjct: 971 WND 973
>gi|114589918|ref|XP_001147599.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 isoform 6 [Pan
troglodytes]
Length = 1008
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 83/169 (49%), Positives = 111/169 (65%), Gaps = 7/169 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I++LH + F S +F IIPLHS++PTV+Q +F P GVRKIV+A
Sbjct: 491 ILVFLPGWDNISTLHDLLMSQVMFKSDKFLIIPLHSLMPTVNQTQVFKRTPPGVRKIVIA 550
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITIDD+VYV+D GK K ++FD ++NI+T+ EW+S ANAKQR+GRAGR
Sbjct: 551 TNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGH 610
Query: 309 ETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC---TTQRPGAILVFL 354
Y ++L D +L +++ + L+ +C R G I FL
Sbjct: 611 CYHLYNGLRASLLDDYQLP----EILRTPLEELCLQIKILRLGGIAYFL 655
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 39/59 (66%)
Query: 26 DPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
D LD +++ +K RY EM R+KLPSY M+ +++++ N+Q+TVISGETG G
Sbjct: 177 DGTLDQKLLEDLQKKKNDLRYIEMQHFREKLPSYGMQKELVNLIDNHQVTVISGETGCG 235
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Query: 316 DVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
DV+ M++D + V+ ++I +L+++I + GAILVFLPGWD I++LH + F S
Sbjct: 460 DVIEMMED---DKVDLNLIVALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKS 516
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 376 CLLY---EFAMVDNKPKEIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHPGTTA 432
CLL+ + ++ + +E I V + + F+ A ++KELR LD+LL K+ P
Sbjct: 909 CLLFFGGDISIQKDNDQETIAVDEWIVFQSPARIAHLVKELRKELDILLQEKIESPHPVD 968
Query: 433 WGD 435
W D
Sbjct: 969 WND 971
>gi|402861178|ref|XP_003894981.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 isoform 1
[Papio anubis]
gi|355746955|gb|EHH51569.1| hypothetical protein EGM_10971 [Macaca fascicularis]
Length = 1008
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 83/169 (49%), Positives = 111/169 (65%), Gaps = 7/169 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I++LH + F S +F IIPLHS++PTV+Q +F P GVRKIV+A
Sbjct: 491 ILVFLPGWDNISTLHDLLMSQVMFKSDKFLIIPLHSLMPTVNQTQVFKRTPPGVRKIVIA 550
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITIDD+VYV+D GK K ++FD ++NI+T+ EW+S ANAKQR+GRAGR
Sbjct: 551 TNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGH 610
Query: 309 ETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC---TTQRPGAILVFL 354
Y ++L D +L +++ + L+ +C R G I FL
Sbjct: 611 CYHLYNGLRASLLDDYQLP----EILRTPLEELCLQIKILRLGGIAYFL 655
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 38/59 (64%)
Query: 26 DPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
D LD +++ +K RY EM R+KLPSY M+ +++++ +Q+TVISGETG G
Sbjct: 177 DGTLDQKLLEDLQKKKNDLRYIEMQHFREKLPSYGMQKELVNLIDKHQVTVISGETGCG 235
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Query: 316 DVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
DV+ M+ D + V+ ++I +L+++I + GAILVFLPGWD I++LH + F S
Sbjct: 460 DVIEMMDD---DKVDLNLIVALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKS 516
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 376 CLLY---EFAMVDNKPKEIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHPGTTA 432
CLL+ + ++ + +E I V + + F+ A ++KELR LD+LL K+ P
Sbjct: 909 CLLFFGGDISIQKDNDQETIAVDEWIVFQSPARIAHLVKELRKELDILLQEKIESPHPVD 968
Query: 433 WGD 435
W D
Sbjct: 969 WND 971
>gi|403265717|ref|XP_003925063.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 isoform 1
[Saimiri boliviensis boliviensis]
Length = 1011
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 83/169 (49%), Positives = 111/169 (65%), Gaps = 7/169 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I++LH + F S +F IIPLHS++PTV+Q +F P GVRKIV+A
Sbjct: 494 ILVFLPGWDNISTLHDLLMSQVMFKSDKFLIIPLHSLMPTVNQTQVFKRTPPGVRKIVIA 553
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITIDD+VYV+D GK K ++FD ++NI+T+ EW+S ANAKQR+GRAGR
Sbjct: 554 TNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSQANAKQRKGRAGRVQPGH 613
Query: 309 ETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC---TTQRPGAILVFL 354
Y ++L D +L +++ + L+ +C R G I FL
Sbjct: 614 CYHLYNGLRASLLDDYQLP----EILRTPLEELCLQIKILRLGGIAYFL 658
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 39/59 (66%)
Query: 26 DPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
D LD +++ +K RY EM R+KLPSY M+ +++++ N+Q+TVISGETG G
Sbjct: 180 DGTLDQQLLEDLQKKKNDLRYIEMQHFREKLPSYGMQKELVNLIDNHQVTVISGETGCG 238
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Query: 316 DVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
DV+ M+ D + V+ ++I +L+++I + GAILVFLPGWD I++LH + F S
Sbjct: 463 DVIEMMDD---DKVDLNLIVALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKS 519
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 376 CLLY---EFAMVDNKPKEIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHPGTTA 432
CLL+ + ++ + +E I V + + F+ A ++KELR LD+LL K+ P
Sbjct: 912 CLLFFGGDISIQKDNDQETIAVDEWIIFQSPARIAHLVKELRKELDILLQEKIESPHPVD 971
Query: 433 WGD 435
W D
Sbjct: 972 WND 974
>gi|332214486|ref|XP_003256366.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DHX36 [Nomascus leucogenys]
Length = 1008
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 83/169 (49%), Positives = 111/169 (65%), Gaps = 7/169 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I++LH + F S +F IIPLHS++PTV+Q +F P GVRKIV+A
Sbjct: 492 ILVFLPGWDNISTLHDLLMSQVMFKSDKFLIIPLHSLMPTVNQTQVFKRTPPGVRKIVIA 551
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITIDD+VYV+D GK K ++FD ++NI+T+ EW+S ANAKQR+GRAGR
Sbjct: 552 TNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGH 611
Query: 309 ETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC---TTQRPGAILVFL 354
Y ++L D +L +++ + L+ +C R G I FL
Sbjct: 612 CYHLYNGLRASLLDDYQLP----EILRTPLEELCLQIKILRLGGIAYFL 656
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 39/59 (66%)
Query: 26 DPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
D LD +++ +K RY EM R+KLPSY M+ +++++ N+Q+TVISGETG G
Sbjct: 178 DGTLDQKLLEDLQKKKNDLRYIEMQHFREKLPSYGMQKELVNLIDNHQVTVISGETGCG 236
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Query: 316 DVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
DV+ M+ D + V+ ++I +L+++I + GAILVFLPGWD I++LH + F S
Sbjct: 461 DVIEMMDD---DKVDLNLIVALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKS 517
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 376 CLLY---EFAMVDNKPKEIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHPGTTA 432
CLL+ + ++ + +E I V + + F+ A ++KELR LD+LL K+ P
Sbjct: 909 CLLFFGGDISIQKDNDQETIAVDEWIVFQSPARIAHLVKELRKELDILLQEKIESPHPVD 968
Query: 433 WGD 435
W D
Sbjct: 969 WND 971
>gi|355559931|gb|EHH16659.1| hypothetical protein EGK_11982 [Macaca mulatta]
Length = 1008
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 83/169 (49%), Positives = 111/169 (65%), Gaps = 7/169 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I++LH + F S +F IIPLHS++PTV+Q +F P GVRKIV+A
Sbjct: 491 ILVFLPGWDNISTLHDLLMSQVMFKSDKFLIIPLHSLMPTVNQTQVFKRTPPGVRKIVIA 550
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITIDD+VYV+D GK K ++FD ++NI+T+ EW+S ANAKQR+GRAGR
Sbjct: 551 TNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGH 610
Query: 309 ETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC---TTQRPGAILVFL 354
Y ++L D +L +++ + L+ +C R G I FL
Sbjct: 611 CYHLYNGLRASLLDDYQLP----EILRTPLEELCLQIKILRLGGIAYFL 655
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 38/59 (64%)
Query: 26 DPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
D LD +++ +K RY EM R+KLPSY M+ +++++ +Q+TVISGETG G
Sbjct: 177 DGTLDQKLLEDLQKKKNDLRYIEMQHFREKLPSYGMQKELVNLIDKHQVTVISGETGCG 235
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Query: 316 DVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
DV+ M+ D + V+ ++I +L+++I + GAILVFLPGWD I++LH + F S
Sbjct: 460 DVIEMMDD---DKVDLNLIVALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKS 516
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 376 CLLY---EFAMVDNKPKEIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHPGTTA 432
CLL+ + ++ + +E I V + + F+ A ++KELR LD+LL K+ P
Sbjct: 909 CLLFFGGDISIQKDNDQETIAVDEWIVFQSPARIAHLVKELRKELDILLQEKIESPHPVD 968
Query: 433 WGD 435
W D
Sbjct: 969 WND 971
>gi|402861182|ref|XP_003894983.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 isoform 3
[Papio anubis]
Length = 979
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 83/169 (49%), Positives = 111/169 (65%), Gaps = 7/169 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I++LH + F S +F IIPLHS++PTV+Q +F P GVRKIV+A
Sbjct: 491 ILVFLPGWDNISTLHDLLMSQVMFKSDKFLIIPLHSLMPTVNQTQVFKRTPPGVRKIVIA 550
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITIDD+VYV+D GK K ++FD ++NI+T+ EW+S ANAKQR+GRAGR
Sbjct: 551 TNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGH 610
Query: 309 ETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC---TTQRPGAILVFL 354
Y ++L D +L +++ + L+ +C R G I FL
Sbjct: 611 CYHLYNGLRASLLDDYQLP----EILRTPLEELCLQIKILRLGGIAYFL 655
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 38/59 (64%)
Query: 26 DPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
D LD +++ +K RY EM R+KLPSY M+ +++++ +Q+TVISGETG G
Sbjct: 177 DGTLDQKLLEDLQKKKNDLRYIEMQHFREKLPSYGMQKELVNLIDKHQVTVISGETGCG 235
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Query: 316 DVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
DV+ M+ D + V+ ++I +L+++I + GAILVFLPGWD I++LH + F S
Sbjct: 460 DVIEMMDD---DKVDLNLIVALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKS 516
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 376 CLLY---EFAMVDNKPKEIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHPGTTA 432
CLL+ + ++ + +E I V + + F+ A ++KELR LD+LL K+ P
Sbjct: 880 CLLFFGGDISIQKDNDQETIAVDEWIVFQSPARIAHLVKELRKELDILLQEKIESPHPVD 939
Query: 433 WGD 435
W D
Sbjct: 940 WND 942
>gi|119599169|gb|EAW78763.1| DEAH (Asp-Glu-Ala-His) box polypeptide 36, isoform CRA_c [Homo
sapiens]
Length = 979
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 83/169 (49%), Positives = 111/169 (65%), Gaps = 7/169 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I++LH + F S +F IIPLHS++PTV+Q +F P GVRKIV+A
Sbjct: 491 ILVFLPGWDNISTLHDLLMSQVMFKSDKFLIIPLHSLMPTVNQTQVFKRTPPGVRKIVIA 550
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITIDD+VYV+D GK K ++FD ++NI+T+ EW+S ANAKQR+GRAGR
Sbjct: 551 TNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGH 610
Query: 309 ETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC---TTQRPGAILVFL 354
Y ++L D +L +++ + L+ +C R G I FL
Sbjct: 611 CYHLYNGLRASLLDDYQLP----EILRTPLEELCLQIKILRLGGIAYFL 655
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 39/59 (66%)
Query: 26 DPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
D LD +++ +K RY EM R+KLPSY M+ +++++ N+Q+TVISGETG G
Sbjct: 177 DGTLDQKLLEDLQKKKNDLRYIEMQHFREKLPSYGMQKELVNLIDNHQVTVISGETGCG 235
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Query: 316 DVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
DV+ M++D + V+ ++I +L+++I + GAILVFLPGWD I++LH + F S
Sbjct: 460 DVIEMMED---DKVDLNLIVALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKS 516
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 376 CLLY---EFAMVDNKPKEIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHPGTTA 432
CLL+ + ++ + +E I V + + F+ A ++KELR LD+LL K+ P
Sbjct: 880 CLLFFGGDISIQKDNDQETIAVDEWIVFQSPARIAHLVKELRKELDILLQEKIESPHPVD 939
Query: 433 WGD 435
W D
Sbjct: 940 WND 942
>gi|7959237|dbj|BAA96012.1| KIAA1488 protein [Homo sapiens]
Length = 852
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 83/169 (49%), Positives = 111/169 (65%), Gaps = 7/169 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I++LH + F S +F IIPLHS++PTV+Q +F P GVRKIV+A
Sbjct: 335 ILVFLPGWDNISTLHDLLMSQVMFKSDKFLIIPLHSLMPTVNQTQVFKRTPPGVRKIVIA 394
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITIDD+VYV+D GK K ++FD ++NI+T+ EW+S ANAKQR+GRAGR
Sbjct: 395 TNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGH 454
Query: 309 ETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC---TTQRPGAILVFL 354
Y ++L D +L +++ + L+ +C R G I FL
Sbjct: 455 CYHLYNGLRASLLDDYQLP----EILRTPLEELCLQIKILRLGGIAYFL 499
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 39/59 (66%)
Query: 26 DPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
D LD +++ +K RY EM R+KLPSY M+ +++++ N+Q+TVISGETG G
Sbjct: 21 DGTLDQKLLEDLQKKKNDLRYIEMQHFREKLPSYGMQKELVNLIDNHQVTVISGETGCG 79
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Query: 316 DVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
DV+ M++D + V+ ++I +L+++I + GAILVFLPGWD I++LH + F S
Sbjct: 304 DVIEMMED---DKVDLNLIVALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKS 360
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 376 CLLY---EFAMVDNKPKEIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHPGTTA 432
CLL+ + ++ + +E I V + + F+ A ++KELR LD+LL K+ P
Sbjct: 753 CLLFFGGDISIQKDNDQETIAVDEWIVFQSPARIAHLVKELRKELDILLQEKIESPHPVD 812
Query: 433 WGD 435
W D
Sbjct: 813 WND 815
>gi|343959540|dbj|BAK63627.1| probable ATP-dependent RNA helicase DHX36 [Pan troglodytes]
Length = 644
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 83/169 (49%), Positives = 111/169 (65%), Gaps = 7/169 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I++LH + F S +F IIPLHS++PTV+Q +F P GVRKIV+A
Sbjct: 127 ILVFLPGWDNISTLHDLLMSQVMFKSDKFLIIPLHSLMPTVNQTQVFKRTPPGVRKIVIA 186
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITIDD+VYV+D GK K ++FD ++NI+T+ EW+S ANAKQR+GRAGR
Sbjct: 187 TNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGH 246
Query: 309 ETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC---TTQRPGAILVFL 354
Y ++L D +L +++ + L+ +C R G I FL
Sbjct: 247 CYHLYNGLRASLLDDYQLP----EILRTPLEELCLQIKILRLGGIAYFL 291
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Query: 316 DVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
DV+ M++D + V+ ++I +L+++I + GAILVFLPGWD I++LH + F S
Sbjct: 96 DVIEMMED---DKVDLNLIVALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKS 152
>gi|403265721|ref|XP_003925065.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 isoform 3
[Saimiri boliviensis boliviensis]
Length = 982
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 83/169 (49%), Positives = 111/169 (65%), Gaps = 7/169 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I++LH + F S +F IIPLHS++PTV+Q +F P GVRKIV+A
Sbjct: 494 ILVFLPGWDNISTLHDLLMSQVMFKSDKFLIIPLHSLMPTVNQTQVFKRTPPGVRKIVIA 553
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITIDD+VYV+D GK K ++FD ++NI+T+ EW+S ANAKQR+GRAGR
Sbjct: 554 TNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSQANAKQRKGRAGRVQPGH 613
Query: 309 ETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC---TTQRPGAILVFL 354
Y ++L D +L +++ + L+ +C R G I FL
Sbjct: 614 CYHLYNGLRASLLDDYQLP----EILRTPLEELCLQIKILRLGGIAYFL 658
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 39/59 (66%)
Query: 26 DPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
D LD +++ +K RY EM R+KLPSY M+ +++++ N+Q+TVISGETG G
Sbjct: 180 DGTLDQQLLEDLQKKKNDLRYIEMQHFREKLPSYGMQKELVNLIDNHQVTVISGETGCG 238
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Query: 316 DVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
DV+ M+ D + V+ ++I +L+++I + GAILVFLPGWD I++LH + F S
Sbjct: 463 DVIEMMDD---DKVDLNLIVALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKS 519
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 376 CLLY---EFAMVDNKPKEIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHPGTTA 432
CLL+ + ++ + +E I V + + F+ A ++KELR LD+LL K+ P
Sbjct: 883 CLLFFGGDISIQKDNDQETIAVDEWIIFQSPARIAHLVKELRKELDILLQEKIESPHPVD 942
Query: 433 WGD 435
W D
Sbjct: 943 WND 945
>gi|296227771|ref|XP_002759521.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 isoform 3
[Callithrix jacchus]
Length = 981
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 83/169 (49%), Positives = 111/169 (65%), Gaps = 7/169 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I++LH + F S +F IIPLHS++PTV+Q +F P GVRKIV+A
Sbjct: 493 ILVFLPGWDNISTLHDLLMSQVMFKSDKFLIIPLHSLMPTVNQTQVFKRTPPGVRKIVIA 552
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITIDD+VYV+D GK K ++FD ++NI+T+ EW+S ANAKQR+GRAGR
Sbjct: 553 TNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSQANAKQRKGRAGRVQPGH 612
Query: 309 ETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC---TTQRPGAILVFL 354
Y ++L D +L +++ + L+ +C R G I FL
Sbjct: 613 CYHLYNGLRASLLDDYQLP----EILRTPLEELCLQIKILRLGGIAYFL 657
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 39/59 (66%)
Query: 26 DPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
D LD +++ +K RY EM R+KLPSY M+ +++++ N+Q+TVISGETG G
Sbjct: 179 DGTLDQQLLEDLQKKKNDLRYIEMQHFREKLPSYGMQKELVNLIDNHQVTVISGETGCG 237
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Query: 316 DVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
DV+ M+ D + V+ ++I +L+++I + GAILVFLPGWD I++LH + F S
Sbjct: 462 DVIEMMDD---DKVDLNLIVALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKS 518
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 376 CLLY---EFAMVDNKPKEIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHPGTTA 432
CLL+ + ++ + +E I V + + F+ A ++KELR LD+LL K+ +P
Sbjct: 882 CLLFFGGDISIQKDNDQETIAVDEWIIFQSPARIAHLVKELRKELDILLQEKIENPHPVD 941
Query: 433 WGD 435
W D
Sbjct: 942 WND 944
>gi|471388060|ref|XP_004379234.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 isoform 1
[Trichechus manatus latirostris]
Length = 1005
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 73/116 (62%), Positives = 91/116 (78%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I+SLH + F S +F IIPLHS++PTV+Q +F P GVRKIV+A
Sbjct: 488 ILVFLPGWDNISSLHDLLMSQVMFQSDKFLIIPLHSLMPTVNQTQVFKKTPPGVRKIVIA 547
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT 304
TNIAETSITIDD+VYV+D GK K ++FD ++NI+T+ EW+S ANAKQR+GRAGR
Sbjct: 548 TNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRV 603
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 39/59 (66%)
Query: 26 DPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
D LD +++ RK RY EM R+KLPSY M+ +++++ N+Q+TVISGETG G
Sbjct: 174 DVTLDQQLLEDLQRKKTDPRYIEMQHFREKLPSYGMQKELVNLIANHQVTVISGETGCG 232
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 4/73 (5%)
Query: 303 RTLKRSETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINS 362
R L+R + + N VL M+ D + V+ ++I +L+++I + GAILVFLPGWD I+S
Sbjct: 445 RELRRRYSARTVN-VLQMMDD---DKVDLNLIAALIRYIVLEEEDGAILVFLPGWDNISS 500
Query: 363 LHRSMCQSSFFNS 375
LH + F S
Sbjct: 501 LHDLLMSQVMFQS 513
>gi|507544120|ref|XP_004656040.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 [Jaculus
jaculus]
Length = 980
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 72/115 (62%), Positives = 91/115 (79%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I++LH + F S +F IIPLHS++PTV+Q +F P GVRKIV+A
Sbjct: 463 ILVFLPGWDNISTLHDLLTSQVMFKSDKFLIIPLHSLMPTVNQTQVFKKTPPGVRKIVIA 522
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITIDD+VYV+D GK K ++FD ++NI+T+ EW+S ANAKQR+GRAGR
Sbjct: 523 TNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSQANAKQRKGRAGR 577
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 38/59 (64%)
Query: 26 DPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
D LD +++ RK RY EM R+KLPSY M+ ++D++ +Q+TVISGETG G
Sbjct: 149 DVALDQRLLEDLQRKKTDPRYIEMQRFREKLPSYGMQKELVDLIDAHQVTVISGETGCG 207
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Query: 316 DVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
DVL M+ D + V+ ++I +L+++I + GAILVFLPGWD I++LH + F S
Sbjct: 432 DVLEMMDD---DKVDLNLIAALIRYIVLEEEDGAILVFLPGWDNISTLHDLLTSQVMFKS 488
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 376 CLLY---EFAMVDNKPKEIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHPGTTA 432
CLL+ + ++ + +E I V + + F+ A ++KELR LD+LL K+ P
Sbjct: 881 CLLFFGGDISIQKDNDQETIAVDEWIVFQSPARIAHLVKELRKELDILLQEKIESPHPVD 940
Query: 433 WGD 435
W D
Sbjct: 941 WKD 943
>gi|471388067|ref|XP_004379236.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 isoform 3
[Trichechus manatus latirostris]
Length = 976
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 73/116 (62%), Positives = 91/116 (78%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I+SLH + F S +F IIPLHS++PTV+Q +F P GVRKIV+A
Sbjct: 488 ILVFLPGWDNISSLHDLLMSQVMFQSDKFLIIPLHSLMPTVNQTQVFKKTPPGVRKIVIA 547
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT 304
TNIAETSITIDD+VYV+D GK K ++FD ++NI+T+ EW+S ANAKQR+GRAGR
Sbjct: 548 TNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRV 603
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 39/59 (66%)
Query: 26 DPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
D LD +++ RK RY EM R+KLPSY M+ +++++ N+Q+TVISGETG G
Sbjct: 174 DVTLDQQLLEDLQRKKTDPRYIEMQHFREKLPSYGMQKELVNLIANHQVTVISGETGCG 232
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 4/73 (5%)
Query: 303 RTLKRSETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINS 362
R L+R + + N VL M+ D + V+ ++I +L+++I + GAILVFLPGWD I+S
Sbjct: 445 RELRRRYSARTVN-VLQMMDD---DKVDLNLIAALIRYIVLEEEDGAILVFLPGWDNISS 500
Query: 363 LHRSMCQSSFFNS 375
LH + F S
Sbjct: 501 LHDLLMSQVMFQS 513
>gi|328909477|gb|AEB61406.1| putative ATP-dependent RNA helicase DHX36-like protein, partial
[Equus caballus]
Length = 343
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 83/169 (49%), Positives = 111/169 (65%), Gaps = 7/169 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I++LH + F S +F IIPLHS++PTV+Q +F P GVRKIV+A
Sbjct: 24 ILVFLPGWDNISTLHDLLMSQVMFKSDKFLIIPLHSLMPTVNQTQVFKRTPPGVRKIVIA 83
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITIDD+V+V+D GK K ++FD ++NI+T+ EW+S ANAKQRRGRAGR
Sbjct: 84 TNIAETSITIDDVVFVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRRGRAGRVQPGH 143
Query: 309 ETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC---TTQRPGAILVFL 354
Y ++L D +L +++ + L+ +C R G I FL
Sbjct: 144 CYHLYNGLRASLLDDYQLP----EILRTPLEELCLQIKILRLGGIACFL 188
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 32/49 (65%)
Query: 327 EGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
+ V+ ++I +L+++I + GAILVFLPGWD I++LH + F S
Sbjct: 1 DKVDLNLIAALIRYIVLKEEDGAILVFLPGWDNISTLHDLLMSQVMFKS 49
>gi|338714877|ref|XP_001489021.3| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Equus
caballus]
Length = 1058
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 83/169 (49%), Positives = 111/169 (65%), Gaps = 7/169 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I++LH + F S +F IIPLHS++PTV+Q +F P GVRKIV+A
Sbjct: 541 ILVFLPGWDNISTLHDLLMSQVMFKSDKFLIIPLHSLMPTVNQTQVFKRTPPGVRKIVIA 600
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITIDD+V+V+D GK K ++FD ++NI+T+ EW+S ANAKQRRGRAGR
Sbjct: 601 TNIAETSITIDDVVFVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRRGRAGRVQPGH 660
Query: 309 ETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC---TTQRPGAILVFL 354
Y ++L D +L +++ + L+ +C R G I FL
Sbjct: 661 CYHLYNGLRASLLDDYQLP----EILRTPLEELCLQIKILRLGGIACFL 705
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 40/59 (67%)
Query: 26 DPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
D LD +++ +K RRY EM R+KLPSY M+ +++M+ N+Q+TVISGETG G
Sbjct: 227 DATLDQQLLEDLQKKKTDRRYIEMQHFREKLPSYGMQKELVNMIDNHQVTVISGETGCG 285
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 37/59 (62%), Gaps = 3/59 (5%)
Query: 317 VLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
V+ M+ D + V+ ++I +L+++I + GAILVFLPGWD I++LH + F S
Sbjct: 511 VMEMMDD---DKVDLNLIAALIRYIVLKEEDGAILVFLPGWDNISTLHDLLMSQVMFKS 566
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 376 CLLY---EFAMVDNKPKEIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHPGTTA 432
CLL+ + ++ +K +E I V + + F+ A ++KELR LD+LL K+ P
Sbjct: 959 CLLFFGGDISIQKDKDQETIAVDEWIVFQSPARIAYLVKELRKELDILLQEKIESPRPVD 1018
Query: 433 WGD 435
W D
Sbjct: 1019 WKD 1021
>gi|426342588|ref|XP_004037921.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Gorilla
gorilla gorilla]
Length = 647
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 83/169 (49%), Positives = 111/169 (65%), Gaps = 7/169 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I++LH + F S +F IIPLHS++PTV+Q +F P GVRKIV+A
Sbjct: 130 ILVFLPGWDNISTLHDLLMSQVMFKSDKFLIIPLHSLMPTVNQTQVFKRTPPGVRKIVIA 189
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITIDD+VYV+D GK K ++FD ++NI+T+ EW+S ANAKQR+GRAGR
Sbjct: 190 TNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGH 249
Query: 309 ETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC---TTQRPGAILVFL 354
Y ++L D +L +++ + L+ +C R G I FL
Sbjct: 250 CYHLYNGLRASLLDDYQLP----EILRTPLEELCLQIKILRLGGIAYFL 294
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Query: 316 DVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
DV+ M++D + V+ ++I +L+++I + GAILVFLPGWD I++LH + F S
Sbjct: 99 DVIEMMED---DKVDLNLIVALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKS 155
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 376 CLLY---EFAMVDNKPKEIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHPGTTA 432
CLL+ + ++ + +E I V + + F+ A ++KELR LD+LL K+ P
Sbjct: 548 CLLFFGGDISIQKDNDQETIAVDEWIVFQSPARIAHLVKELRKELDILLQEKIESPHPVD 607
Query: 433 WGD 435
W D
Sbjct: 608 WSD 610
>gi|504178125|ref|XP_004598156.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 [Ochotona
princeps]
Length = 975
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 72/116 (62%), Positives = 91/116 (78%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I++LH + F S +F IIPLHS++PTV+Q +F P GVRKIV+A
Sbjct: 458 ILVFLPGWDNISTLHELLMSQVMFKSDKFIIIPLHSLMPTVNQTQVFKKTPPGVRKIVIA 517
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT 304
TNIAETSITIDD+VYV+D GK K ++FD ++NI+T+ EW+S ANAKQR+GRAGR
Sbjct: 518 TNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMAAEWVSKANAKQRKGRAGRV 573
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 45/64 (70%), Gaps = 6/64 (9%)
Query: 25 NDPVLDAAFKKEMIRKLQSR----RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGE 80
N+P DA+ ++++ LQ + RY EM R+KLPSY+M+ +++++ ++Q+TVISGE
Sbjct: 160 NEP--DASLDQKLLEDLQKKKTDLRYIEMQRFREKLPSYRMQKELINLIDSHQVTVISGE 217
Query: 81 TGSG 84
TG G
Sbjct: 218 TGCG 221
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Query: 316 DVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
DVL M+ D + V+ ++I +L+++I + GAILVFLPGWD I++LH + F S
Sbjct: 427 DVLEMMDD---DKVDLNLIAALIRYIVLEEEDGAILVFLPGWDNISTLHELLMSQVMFKS 483
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 376 CLLY---EFAMVDNKPKEIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHPGTTA 432
CLL+ + ++ + +E I V + + F+ A ++KELR LD+LL K+ P
Sbjct: 876 CLLFFGGDISIQKDNDQETIAVDEWIVFQSPARIAHLVKELRKELDILLQEKIESPHPVD 935
Query: 433 WGD 435
W D
Sbjct: 936 WKD 938
>gi|91088735|ref|XP_975259.1| PREDICTED: similar to DEAH (Asp-Glu-Ala-His) box polypeptide 36
[Tribolium castaneum]
Length = 885
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 72/116 (62%), Positives = 91/116 (78%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL+FL G+ I++L R M +S F +F I PLHS++PT+ QK IF+TPP G+RKI++A
Sbjct: 385 ILIFLTGFHEISTLSRLMSESGRFPPGKFLIFPLHSLMPTLEQKQIFDTPPRGMRKIIIA 444
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT 304
TNIAETSITIDD+VYV+DCGK K++NFD + N L PEW+SLANA QRRGRAGR
Sbjct: 445 TNIAETSITIDDVVYVIDCGKIKVTNFDARTNSDILAPEWVSLANANQRRGRAGRV 500
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 40/63 (63%)
Query: 22 KLLNDPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGET 81
+L D L+ + ++ ++K S +Y M+ R KLP++ M+D +L ++ NQ+ VISGET
Sbjct: 111 RLAEDATLNQSLYEDFLQKQSSPKYMNMIAKRTKLPAFNMKDEILKVIDENQVVVISGET 170
Query: 82 GSG 84
G G
Sbjct: 171 GCG 173
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 35/62 (56%)
Query: 381 FAMVDNKPKEIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHPGTTAWGDPNEGN 440
F + + I++ L F+C STA IIKELR R + L +K+SHPG WG +E
Sbjct: 801 FNQICEDGRSFISINQNLRFKCSESTASIIKELRDRFNWFLEYKISHPGPVVWGGDDETQ 860
Query: 441 IL 442
IL
Sbjct: 861 IL 862
Score = 42.4 bits (98), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 324 PELEGVNNDVIFSLLQHICTTQR-PGAILVFLPGWDTINSLHRSMCQSSFF 373
PE E +N ++I L+ +C +R GAIL+FL G+ I++L R M +S F
Sbjct: 358 PECEDINLELILQLVIDVCGKERDEGAILIFLTGFHEISTLSRLMSESGRF 408
>gi|478536320|ref|XP_004442281.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 [Ceratotherium
simum simum]
Length = 989
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/169 (49%), Positives = 110/169 (65%), Gaps = 7/169 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I++LH + F S +F IIPLHS++PTV+Q +F P GVRKIV+A
Sbjct: 472 ILVFLPGWDNISTLHDLLMSQVMFKSDKFLIIPLHSLMPTVNQTQVFKRTPPGVRKIVIA 531
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITIDD+V+V+D GK K ++FD ++NI+T+ EW+S ANAKQRRGRAGR
Sbjct: 532 TNIAETSITIDDVVFVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRRGRAGRVQPGH 591
Query: 309 ETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC---TTQRPGAILVFL 354
Y +L D +L +++ + L+ +C R G I FL
Sbjct: 592 CYHLYNGLRATLLDDYQLP----EILRTPLEELCLQIKILRLGGIACFL 636
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 39/59 (66%)
Query: 26 DPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
D LD +++ +K RY EM R+KLPSY M+ +++M+ N+Q+TVISGETG G
Sbjct: 158 DITLDQQLLEDLQKKKTDLRYIEMQHFREKLPSYGMQKELVNMIDNHQVTVISGETGCG 216
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 37/59 (62%), Gaps = 3/59 (5%)
Query: 317 VLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
V+ M+ D + V+ ++I +L+++I + GAILVFLPGWD I++LH + F S
Sbjct: 442 VMEMMDD---DKVDLNLIAALIRYIVLKEEDGAILVFLPGWDNISTLHDLLMSQVMFKS 497
Score = 41.6 bits (96), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 376 CLLY---EFAMVDNKPKEIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHPGTTA 432
CLL+ + ++ +K +E I V + + F+ A ++KELR LD+LL K+ P
Sbjct: 890 CLLFFGGDISIQKDKDQETIAVDEWIVFQSPARIAYLVKELRKELDILLQEKIESPRPVD 949
Query: 433 WGD 435
W D
Sbjct: 950 WKD 952
>gi|440895350|gb|ELR47562.1| Putative ATP-dependent RNA helicase DHX36 [Bos grunniens mutus]
Length = 1010
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/169 (49%), Positives = 112/169 (66%), Gaps = 7/169 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I++LH + F S +F IIPLHS++PTV+Q +F P GVRKIV+A
Sbjct: 493 ILVFLPGWDNISTLHDLLMSQVMFKSDKFIIIPLHSLMPTVNQTQVFKRTPPGVRKIVIA 552
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITIDD+VYV+D GK K ++FD ++NI+T+ EW+S ANAKQR+GRAGR
Sbjct: 553 TNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGH 612
Query: 309 ETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC---TTQRPGAILVFL 354
Y + ++L D +L +++ + L+ +C R G I FL
Sbjct: 613 CYHLYNSLRASLLDDYQLP----EILRTPLEELCLQIKILRLGGIAHFL 657
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 43/66 (65%), Gaps = 4/66 (6%)
Query: 23 LLNDPVLDAAFKKEMIRKLQSR----RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVIS 78
LL + DA ++++ LQ + RY EM R+KLPSY M+ +++M+ N+Q+TVIS
Sbjct: 172 LLQENEPDATLDQQLLEDLQKKKTDLRYIEMQRFREKLPSYGMQKELVNMIDNHQVTVIS 231
Query: 79 GETGSG 84
GETG G
Sbjct: 232 GETGCG 237
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Query: 316 DVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
DV+ M+ D E V+ ++I +L+++I + GAILVFLPGWD I++LH + F S
Sbjct: 462 DVVEMMDD---EKVDLNLIAALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKS 518
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 376 CLLY---EFAMVDNKPKEIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHPGTTA 432
CLL+ + ++ + +E I V + + F+ A ++KELR LD+LL K+ P
Sbjct: 911 CLLFFGGDISIQKDNDQETIAVDEWIIFQSPARIAHLVKELRKELDILLQEKIESPHPVD 970
Query: 433 WGD 435
W D
Sbjct: 971 WKD 973
>gi|395842742|ref|XP_003794172.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DHX36 [Otolemur garnettii]
Length = 1006
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 72/115 (62%), Positives = 91/115 (79%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I++LH + F S +F IIPLHS++PTV+Q +F P GVRKIV+A
Sbjct: 489 ILVFLPGWDNISTLHDLLMSQVMFKSDKFLIIPLHSLMPTVNQTQVFKKTPPGVRKIVIA 548
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITIDD+VYV+D GK K ++FD ++NI+T+ EW+S ANAKQR+GRAGR
Sbjct: 549 TNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGR 603
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 39/59 (66%)
Query: 26 DPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
D LD +++ +K RY EM R+KLPSY M+ +++++ N+Q+TVISGETG G
Sbjct: 175 DVTLDQQLLEDLQKKKSDPRYIEMQHFREKLPSYGMQKELVNLIDNHQVTVISGETGCG 233
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 40/64 (62%)
Query: 312 QYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSS 371
+Y ++++K + + V+ ++I +L+++I + GAILVFLPGWD I++LH +
Sbjct: 451 KYSASTVDVIKTMDDDKVDLNLIAALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQV 510
Query: 372 FFNS 375
F S
Sbjct: 511 MFKS 514
>gi|426218091|ref|XP_004003283.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 isoform 1
[Ovis aries]
Length = 1010
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/169 (49%), Positives = 112/169 (66%), Gaps = 7/169 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I++LH + F S +F IIPLHS++PTV+Q +F P GVRKIV+A
Sbjct: 493 ILVFLPGWDNISTLHDLLMSQVMFKSDKFIIIPLHSLMPTVNQTQVFKRTPPGVRKIVIA 552
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITIDD+VYV+D GK K ++FD ++NI+T+ EW+S ANAKQR+GRAGR
Sbjct: 553 TNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGH 612
Query: 309 ETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC---TTQRPGAILVFL 354
Y + ++L D +L +++ + L+ +C R G I FL
Sbjct: 613 CYHLYNSLRASLLDDYQLP----EILRTPLEELCLQIKILRLGGIAHFL 657
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 40/59 (67%)
Query: 26 DPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
D +LD +++ +K RY EM R+KLPSY M+ +++M+ N+Q+TVISGETG G
Sbjct: 179 DAILDQQLLEDLQKKKTDLRYIEMQRFREKLPSYGMQKELVNMIDNHQVTVISGETGCG 237
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 42/69 (60%)
Query: 307 RSETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRS 366
R Q+Y +++++ + E V+ ++I +L+++I + GAILVFLPGWD I++LH
Sbjct: 450 RELRQRYSASTVDVIEVMDDEKVDLNLIAALIRYIVLEEEDGAILVFLPGWDNISTLHDL 509
Query: 367 MCQSSFFNS 375
+ F S
Sbjct: 510 LMSQVMFKS 518
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 376 CLLY---EFAMVDNKPKEIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHPGTTA 432
CLL+ + ++ + +E I V + + F+ A ++KELR LD+LL K+ P
Sbjct: 911 CLLFFGGDISIQKDNDQETIAVDEWIIFQSPARIAHLVKELRKELDILLQEKIESPHPVD 970
Query: 433 WGD 435
W D
Sbjct: 971 WKD 973
>gi|122692521|ref|NP_001073720.1| probable ATP-dependent RNA helicase DHX36 [Bos taurus]
gi|115545400|gb|AAI22653.1| DEAH (Asp-Glu-Ala-His) box polypeptide 36 [Bos taurus]
gi|296491062|tpg|DAA33145.1| TPA: DEAH (Asp-Glu-Ala-His) box polypeptide 36 [Bos taurus]
Length = 1010
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/169 (49%), Positives = 112/169 (66%), Gaps = 7/169 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I++LH + F S +F IIPLHS++PTV+Q +F P GVRKIV+A
Sbjct: 493 ILVFLPGWDNISTLHDLLMSQVMFKSDKFIIIPLHSLMPTVNQTQVFKRTPPGVRKIVIA 552
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITIDD+VYV+D GK K ++FD ++NI+T+ EW+S ANAKQR+GRAGR
Sbjct: 553 TNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGH 612
Query: 309 ETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC---TTQRPGAILVFL 354
Y + ++L D +L +++ + L+ +C R G I FL
Sbjct: 613 CYHLYNSLRASLLDDYQLP----EILRTPLEELCLQIKILRLGGIAHFL 657
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 43/66 (65%), Gaps = 4/66 (6%)
Query: 23 LLNDPVLDAAFKKEMIRKLQSR----RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVIS 78
LL + DA ++++ LQ + RY EM R+KLPSY M+ +++M+ N+Q+TVIS
Sbjct: 172 LLQENEPDATLDQQLLEDLQKKKTDLRYIEMQRFREKLPSYGMQKELVNMIDNHQVTVIS 231
Query: 79 GETGSG 84
GETG G
Sbjct: 232 GETGCG 237
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Query: 316 DVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
DV+ M+ D E V+ ++I +L+++I + GAILVFLPGWD I++LH + F S
Sbjct: 462 DVVEMMDD---EKVDLNLIAALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKS 518
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 376 CLLY---EFAMVDNKPKEIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHPGTTA 432
CLL+ + ++ + +E I V + + F+ A ++KELR LD+LL K+ P
Sbjct: 911 CLLFFGGDISIQKDNDQETIAVDEWIIFQSPARIAHLVKELRKELDILLQEKIESPHPVD 970
Query: 433 WGD 435
W D
Sbjct: 971 WKD 973
>gi|332028283|gb|EGI68330.1| Putative ATP-dependent RNA helicase DHX36 [Acromyrmex echinatior]
Length = 958
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/204 (41%), Positives = 117/204 (57%), Gaps = 50/204 (24%)
Query: 100 QQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVYCTYTFMGVSPMKVFFCK 159
++Y V++ L++P E ++ ++I L+++IC T+ PGA
Sbjct: 404 KKYETHVIDQLRNPNSENLSLELIEKLVRYICNTKGPGA--------------------- 442
Query: 160 NVLQRLMKGVGANSPKRWVKLLRSMLVVPILVFLPGWDTINSLHRSMCQSSFFNSSRFQI 219
IL+FLPG I++L++ M +S + S + I
Sbjct: 443 -----------------------------ILIFLPGMMDISNLNKMMLESGCYPSHAYVI 473
Query: 220 IPLHSMLPTVSQKSIFNTPPEGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKD 279
PLHS +PTV QK IF P G+RKI++AT+IAETSITI+D+VYV+DCGK K S FD+
Sbjct: 474 YPLHSRMPTVDQKLIFKEPSHGIRKIIIATSIAETSITIEDVVYVIDCGKIKYSKFDLNK 533
Query: 280 NIATLKPEWISLANAKQRRGRAGR 303
NI TL+PEW+SLANAKQRRGRAGR
Sbjct: 534 NIQTLEPEWVSLANAKQRRGRAGR 557
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 45/65 (69%)
Query: 311 QQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQS 370
++Y V++ L++P E ++ ++I L+++IC T+ PGAIL+FLPG I++L++ M +S
Sbjct: 404 KKYETHVIDQLRNPNSENLSLELIEKLVRYICNTKGPGAILIFLPGMMDISNLNKMMLES 463
Query: 371 SFFNS 375
+ S
Sbjct: 464 GCYPS 468
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 37/63 (58%)
Query: 22 KLLNDPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGET 81
KL + +D + + +K Y ML+ R KLP+Y+ R +L ++ +NQ+ VISGET
Sbjct: 128 KLQRNSDIDRILQNDYRQKHNQDAYNNMLKFRLKLPAYKKRLEILQLIEDNQVVVISGET 187
Query: 82 GSG 84
G G
Sbjct: 188 GCG 190
>gi|326926269|ref|XP_003209325.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like
[Meleagris gallopavo]
Length = 887
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 73/115 (63%), Positives = 91/115 (79%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I+SLH + F S RF IIPLHS++PTV+Q +F P GVRKIV+A
Sbjct: 370 ILVFLPGWDNISSLHDLLMSQVMFKSDRFIIIPLHSLMPTVNQTQVFKKTPPGVRKIVIA 429
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITIDD+V+V+D GK K ++FD ++NI+T+ EW+S ANAKQR+GRAGR
Sbjct: 430 TNIAETSITIDDVVFVIDGGKIKETHFDTQNNISTMAAEWVSKANAKQRKGRAGR 484
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 42/64 (65%)
Query: 21 QKLLNDPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGE 80
+K D LD K+++ +K RY EM R+KLPSY MR +++++ NN++TVISGE
Sbjct: 51 EKSDQDADLDEQLKEDLRKKKSDPRYIEMQRFREKLPSYGMRQELVNLINNNRVTVISGE 110
Query: 81 TGSG 84
TG G
Sbjct: 111 TGCG 114
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 316 DVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
D L M+ D + V+ D+I +L++HI + GAILVFLPGWD I+SLH + F S
Sbjct: 339 DALEMMDD---DKVDLDLIAALIRHIVLEEEDGAILVFLPGWDNISSLHDLLMSQVMFKS 395
>gi|525007792|ref|XP_005051548.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 [Ficedula
albicollis]
Length = 929
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 72/115 (62%), Positives = 91/115 (79%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I++LH + F S RF IIPLHS++PTV+Q +F P GVRKIV+A
Sbjct: 412 ILVFLPGWDNISTLHEILMSQVMFKSDRFIIIPLHSLMPTVNQTQVFKKTPPGVRKIVIA 471
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITIDD+V+V+D GK K ++FD ++NI+T+ EW+S ANAKQR+GRAGR
Sbjct: 472 TNIAETSITIDDVVFVIDGGKIKETHFDTQNNISTMAAEWVSKANAKQRKGRAGR 526
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 43/64 (67%)
Query: 21 QKLLNDPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGE 80
+K D LD K+++++K RY EM R+KLPSY+MR+ ++ ++ +++TVISGE
Sbjct: 93 EKTEQDADLDEQLKEDLMKKRSDPRYIEMQRFREKLPSYKMREELVKLINTHRVTVISGE 152
Query: 81 TGSG 84
TG G
Sbjct: 153 TGCG 156
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 336 SLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
+L++HI + GAILVFLPGWD I++LH + F S
Sbjct: 398 ALIRHIVLEEEDGAILVFLPGWDNISTLHEILMSQVMFKS 437
>gi|126338459|ref|XP_001363983.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 isoform 1
[Monodelphis domestica]
Length = 1009
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/169 (49%), Positives = 111/169 (65%), Gaps = 7/169 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I++LH + F S RF IIPLHS++PTV+Q +F P GVRKIV+A
Sbjct: 492 ILVFLPGWDNISTLHDLLMSQVMFKSDRFIIIPLHSLMPTVNQTQVFKRTPPGVRKIVIA 551
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITIDD+V+V+D GK K ++FD ++NI+T+ EW+S ANAKQR+GRAGR
Sbjct: 552 TNIAETSITIDDVVHVIDGGKIKETHFDTQNNISTMAAEWVSKANAKQRKGRAGRVQPGH 611
Query: 309 ETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC---TTQRPGAILVFL 354
Y ++L D +L +++ + L+ +C R G I FL
Sbjct: 612 CYHLYNGLRASLLDDYQLP----EILRTPLEELCLQIKILRLGGIAYFL 656
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 40/59 (67%)
Query: 26 DPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
D LD K+++ RK RY EM R+KLPSY M+ +++++ NNQ+TVISGETG G
Sbjct: 178 DVDLDQQLKEDLKRKKSDPRYIEMQHFREKLPSYGMQKELVNLINNNQVTVISGETGCG 236
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Query: 316 DVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
DVL M+ D + V+ +++ +L++HI + GAILVFLPGWD I++LH + F S
Sbjct: 461 DVLEMMDD---DKVDLNLVAALIRHIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKS 517
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 376 CLLY---EFAMVDNKPKEIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHPGTTA 432
CLL+ + ++ +K +E I V + + F+ A ++KELR LD LL K+ +P
Sbjct: 910 CLLFFGGDISIQKDKDQETIAVDEWIVFQSPARIAHLVKELRKELDALLQEKIENPHPVD 969
Query: 433 WGD 435
W +
Sbjct: 970 WKE 972
>gi|507947040|ref|XP_004682387.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 isoform X1
[Condylura cristata]
Length = 1008
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 83/169 (49%), Positives = 111/169 (65%), Gaps = 7/169 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I++LH + F S +F IIPLHS++PTV+Q +F P GVRKIV+A
Sbjct: 491 ILVFLPGWDNISTLHDLLMSQVMFKSDKFLIIPLHSLMPTVNQTQVFKRTPPGVRKIVIA 550
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITIDD+VYV+D GK K ++FD ++NI+T+ EW+S ANAKQR+GRAGR
Sbjct: 551 TNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSNANAKQRKGRAGRVQPGH 610
Query: 309 ETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC---TTQRPGAILVFL 354
Y ++L D +L +++ + L+ +C R G I FL
Sbjct: 611 CYHLYNGLRASLLDDYQLP----EILRTPLEELCLQIKILRLGGIADFL 655
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 39/59 (66%)
Query: 26 DPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
D LD +++ +K RY EM R+KLPSY M+ +++M+ N+Q+TVISGETG G
Sbjct: 177 DVTLDQQLLEDLQKKKTDLRYIEMQHFREKLPSYGMQKELVNMIDNHQVTVISGETGCG 235
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Query: 316 DVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
D++ M+ D + V+ ++I +L++HI + GAILVFLPGWD I++LH + F S
Sbjct: 460 DIIEMMDD---DKVDLNLIAALIRHIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKS 516
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 376 CLLY---EFAMVDNKPKEIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHPGTTA 432
CLL+ + ++ + +E I V + + F+ A ++KELR LD+LL K+ P
Sbjct: 909 CLLFFGGDISIQKDNDQETIAVDEWIIFQSPARIAHLVKELRKELDILLQEKIESPHPVD 968
Query: 433 WGD 435
W D
Sbjct: 969 WKD 971
>gi|507947043|ref|XP_004682388.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 isoform X2
[Condylura cristata]
Length = 979
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 83/169 (49%), Positives = 111/169 (65%), Gaps = 7/169 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I++LH + F S +F IIPLHS++PTV+Q +F P GVRKIV+A
Sbjct: 491 ILVFLPGWDNISTLHDLLMSQVMFKSDKFLIIPLHSLMPTVNQTQVFKRTPPGVRKIVIA 550
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITIDD+VYV+D GK K ++FD ++NI+T+ EW+S ANAKQR+GRAGR
Sbjct: 551 TNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSNANAKQRKGRAGRVQPGH 610
Query: 309 ETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC---TTQRPGAILVFL 354
Y ++L D +L +++ + L+ +C R G I FL
Sbjct: 611 CYHLYNGLRASLLDDYQLP----EILRTPLEELCLQIKILRLGGIADFL 655
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 39/59 (66%)
Query: 26 DPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
D LD +++ +K RY EM R+KLPSY M+ +++M+ N+Q+TVISGETG G
Sbjct: 177 DVTLDQQLLEDLQKKKTDLRYIEMQHFREKLPSYGMQKELVNMIDNHQVTVISGETGCG 235
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Query: 316 DVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
D++ M+ D + V+ ++I +L++HI + GAILVFLPGWD I++LH + F S
Sbjct: 460 DIIEMMDD---DKVDLNLIAALIRHIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKS 516
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 376 CLLY---EFAMVDNKPKEIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHPGTTA 432
CLL+ + ++ + +E I V + + F+ A ++KELR LD+LL K+ P
Sbjct: 880 CLLFFGGDISIQKDNDQETIAVDEWIIFQSPARIAHLVKELRKELDILLQEKIESPHPVD 939
Query: 433 WGD 435
W D
Sbjct: 940 WKD 942
>gi|513200255|ref|XP_004943621.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 isoform X3
[Gallus gallus]
Length = 939
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 72/115 (62%), Positives = 91/115 (79%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I++LH + F S RF IIPLHS++PTV+Q +F P GVRKIV+A
Sbjct: 470 ILVFLPGWDNISTLHDLLMSQVMFKSDRFIIIPLHSLMPTVNQTQVFKKTPPGVRKIVIA 529
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITIDD+V+V+D GK K ++FD ++NI+T+ EW+S ANAKQR+GRAGR
Sbjct: 530 TNIAETSITIDDVVFVIDGGKIKETHFDTQNNISTMAAEWVSKANAKQRKGRAGR 584
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 40/60 (66%)
Query: 25 NDPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
D LD K+++ +K RY EM R+KLPSY MR +++++ NN++TVISGETG G
Sbjct: 155 QDADLDEQLKEDLRKKKSDPRYIEMQRFREKLPSYGMRQELVNLINNNRVTVISGETGCG 214
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 316 DVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
D L M+ D + V+ D+I +L++HI + GAILVFLPGWD I++LH + F S
Sbjct: 439 DALEMMDD---DKVDLDLIAALIRHIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKS 495
>gi|514763465|ref|XP_005023742.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like, partial
[Anas platyrhynchos]
Length = 873
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 72/115 (62%), Positives = 91/115 (79%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I++LH + F S RF IIPLHS++PTV+Q +F P GVRKIV+A
Sbjct: 356 ILVFLPGWDNISTLHDLLMSQVMFKSDRFIIIPLHSLMPTVNQTQVFKKTPPGVRKIVIA 415
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITIDD+V+V+D GK K ++FD ++NI+T+ EW+S ANAKQR+GRAGR
Sbjct: 416 TNIAETSITIDDVVFVIDGGKIKETHFDTQNNISTMAAEWVSKANAKQRKGRAGR 470
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 42/64 (65%)
Query: 21 QKLLNDPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGE 80
+K D LD K+++ +K RY EM R+KLPSY MR +++++ NN++TVISGE
Sbjct: 37 EKNQQDTDLDEQLKEDLRKKKSDPRYIEMQRFREKLPSYGMRQELVNLINNNRVTVISGE 96
Query: 81 TGSG 84
TG G
Sbjct: 97 TGCG 100
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 316 DVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
D L M+ D + V+ D+I +L++HI + GAILVFLPGWD I++LH + F S
Sbjct: 325 DALEMMDD---DKVDLDLIAALIRHIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKS 381
>gi|363737298|ref|XP_422834.3| PREDICTED: probable ATP-dependent RNA helicase DHX36 isoformX2
[Gallus gallus]
Length = 995
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 72/115 (62%), Positives = 91/115 (79%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I++LH + F S RF IIPLHS++PTV+Q +F P GVRKIV+A
Sbjct: 478 ILVFLPGWDNISTLHDLLMSQVMFKSDRFIIIPLHSLMPTVNQTQVFKKTPPGVRKIVIA 537
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITIDD+V+V+D GK K ++FD ++NI+T+ EW+S ANAKQR+GRAGR
Sbjct: 538 TNIAETSITIDDVVFVIDGGKIKETHFDTQNNISTMAAEWVSKANAKQRKGRAGR 592
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 40/60 (66%)
Query: 25 NDPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
D LD K+++ +K RY EM R+KLPSY MR +++++ NN++TVISGETG G
Sbjct: 163 QDADLDEQLKEDLRKKKSDPRYIEMQRFREKLPSYGMRQELVNLINNNRVTVISGETGCG 222
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 316 DVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
D L M+ D + V+ D+I +L++HI + GAILVFLPGWD I++LH + F S
Sbjct: 447 DALEMMDD---DKVDLDLIAALIRHIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKS 503
>gi|513200258|ref|XP_004943622.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 isoform X4
[Gallus gallus]
Length = 913
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 72/115 (62%), Positives = 91/115 (79%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I++LH + F S RF IIPLHS++PTV+Q +F P GVRKIV+A
Sbjct: 396 ILVFLPGWDNISTLHDLLMSQVMFKSDRFIIIPLHSLMPTVNQTQVFKKTPPGVRKIVIA 455
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITIDD+V+V+D GK K ++FD ++NI+T+ EW+S ANAKQR+GRAGR
Sbjct: 456 TNIAETSITIDDVVFVIDGGKIKETHFDTQNNISTMAAEWVSKANAKQRKGRAGR 510
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 40/60 (66%)
Query: 25 NDPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
D LD K+++ +K RY EM R+KLPSY MR +++++ NN++TVISGETG G
Sbjct: 81 QDADLDEQLKEDLRKKKSDPRYIEMQRFREKLPSYGMRQELVNLINNNRVTVISGETGCG 140
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 316 DVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
D L M+ D + V+ D+I +L++HI + GAILVFLPGWD I++LH + F S
Sbjct: 365 DALEMMDD---DKVDLDLIAALIRHIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKS 421
>gi|507714495|ref|XP_004648281.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 isoform X1
[Octodon degus]
Length = 1002
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 82/169 (48%), Positives = 111/169 (65%), Gaps = 7/169 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I++LH + F S +F IIPLHS++PTV+Q +F P GVRKIV+A
Sbjct: 485 ILVFLPGWDNISTLHDLLMSQVMFKSDKFIIIPLHSLMPTVNQTQVFKRTPPGVRKIVIA 544
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITIDD+V+V+D GK K ++FD ++NI+T+ EW+S ANAKQR+GRAGR
Sbjct: 545 TNIAETSITIDDVVFVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGH 604
Query: 309 ETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC---TTQRPGAILVFL 354
Y ++L D +L +++ + L+ +C R G I FL
Sbjct: 605 CYHLYNGLRASLLDDYQLP----EILRTPLEELCLQIKILRLGGIAYFL 649
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Query: 25 NDP--VLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETG 82
N+P LD +++ +K RY EM R+KLPSY ++ ++D++ +Q+TVISGETG
Sbjct: 168 NEPNVTLDQQLLEDLQKKKTDLRYIEMQRFREKLPSYGLQKELVDLIDKHQVTVISGETG 227
Query: 83 SG 84
G
Sbjct: 228 CG 229
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Query: 295 KQRRGRAGRTLKRSETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFL 354
K+R R L+R +Y + +++L+ + + V+ +I +L++HI + GAILVFL
Sbjct: 434 KERWPDYVRELRR----RYSANTVDVLERMDDDKVDLTLIAALIRHIVLEEEEGAILVFL 489
Query: 355 PGWDTINSLHRSMCQSSFFNS 375
PGWD I++LH + F S
Sbjct: 490 PGWDNISTLHDLLMSQVMFKS 510
>gi|345327898|ref|XP_001511483.2| PREDICTED: probable ATP-dependent RNA helicase DHX36
[Ornithorhynchus anatinus]
Length = 1002
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 83/169 (49%), Positives = 111/169 (65%), Gaps = 7/169 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I++LH + F S RF IIPLHS++PTV+Q +F P GVRKIV+A
Sbjct: 485 ILVFLPGWDNISTLHDLLMSQVMFKSDRFIIIPLHSLMPTVNQTQVFKKTPPGVRKIVIA 544
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITIDD+V+V+D GK K ++FD ++NI+T+ EW+S ANAKQR+GRAGR
Sbjct: 545 TNIAETSITIDDVVHVIDGGKIKETHFDTQNNISTMAAEWVSKANAKQRKGRAGRVQPGH 604
Query: 309 ETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC---TTQRPGAILVFL 354
Y ++L D +L +++ + L+ +C R G I FL
Sbjct: 605 CYHLYNGLRASLLDDYQLP----EILRTPLEELCLQIKILRLGGIAYFL 649
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 40/59 (67%)
Query: 26 DPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
D LD K ++ RK RY EM R+KLPSY+M+ +++++ NNQ+TVISGETG G
Sbjct: 171 DTDLDQQLKDDLRRKKSEPRYIEMQRFREKLPSYRMQKELVNLINNNQVTVISGETGCG 229
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 41/64 (64%)
Query: 312 QYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSS 371
+Y + +++L+ + E V+ ++I +L++HI + GAILVFLPGWD I++LH +
Sbjct: 447 RYSANTIDVLETIDDEKVDLNLIAALIRHIVLEEEDGAILVFLPGWDNISTLHDLLMSQV 506
Query: 372 FFNS 375
F S
Sbjct: 507 MFKS 510
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 376 CLLY---EFAMVDNKPKEIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHPGTTA 432
CLL+ + ++ +K ++ I V + + F+ A ++KELR LD LL K+ +P
Sbjct: 903 CLLFFGGDISIQKDKDQDTIAVDEWIVFQSPARIAHLVKELRKELDALLQEKIENPHPVD 962
Query: 433 WGD 435
W D
Sbjct: 963 WKD 965
>gi|395528308|ref|XP_003766272.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DHX36 [Sarcophilus harrisii]
Length = 962
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 83/169 (49%), Positives = 111/169 (65%), Gaps = 7/169 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I++LH + F S RF IIPLHS++PTV+Q +F P GVRKIV+A
Sbjct: 445 ILVFLPGWDNISTLHDLLMSQVMFKSDRFIIIPLHSLMPTVNQTQVFKRTPPGVRKIVIA 504
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITIDD+V+V+D GK K ++FD ++NI+T+ EW+S ANAKQR+GRAGR
Sbjct: 505 TNIAETSITIDDVVHVIDGGKIKETHFDTQNNISTMAAEWVSKANAKQRKGRAGRVQPGH 564
Query: 309 ETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC---TTQRPGAILVFL 354
Y ++L D +L +++ + L+ +C R G I FL
Sbjct: 565 CYHLYNGLRASLLDDYQLP----EILRTPLEELCLQIKILRLGGIAYFL 609
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 40/59 (67%)
Query: 26 DPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
D LD K+++ RK RY EM R+KLPSY M+ +++++ NNQ+TVISGETG G
Sbjct: 128 DVDLDQLLKEDLKRKKSDPRYIEMQHFREKLPSYGMQKELVNLINNNQVTVISGETGCG 186
>gi|512833299|ref|XP_004882662.1| PREDICTED: probable ATP-dependent RNA helicase DHX36
[Heterocephalus glaber]
gi|512944024|ref|XP_004834541.1| PREDICTED: probable ATP-dependent RNA helicase DHX36
[Heterocephalus glaber]
Length = 1019
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 82/169 (48%), Positives = 111/169 (65%), Gaps = 7/169 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I++LH + F S +F IIPLHS++PTV+Q +F P GVRKIV+A
Sbjct: 510 ILVFLPGWDNISTLHDLLMSQVMFKSDKFIIIPLHSLMPTVNQTQVFKRTPPGVRKIVIA 569
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITIDD+V+V+D GK K ++FD ++NI+T+ EW+S ANAKQR+GRAGR
Sbjct: 570 TNIAETSITIDDVVFVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGH 629
Query: 309 ETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC---TTQRPGAILVFL 354
Y ++L D +L +++ + L+ +C R G I FL
Sbjct: 630 CYHLYNGLRASLLDDYQLP----EILRTPLEELCLQIKILRLGGIAYFL 674
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Query: 316 DVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
DVL M+ D + V+ ++I +L+Q+I + GAILVFLPGWD I++LH + F S
Sbjct: 479 DVLKMMDD---DKVDLNLIAALIQYIVLEEEEGAILVFLPGWDNISTLHDLLMSQVMFKS 535
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 41/66 (62%), Gaps = 4/66 (6%)
Query: 23 LLNDPVLDAAFKKEMIRKLQSRR----YQEMLEARKKLPSYQMRDAVLDMVRNNQITVIS 78
LL D D ++++ LQ ++ Y EM R+KLPSY M+ ++D++ +Q+TVIS
Sbjct: 189 LLQDNEPDVTLDQQLLEDLQKKKKDLQYIEMQCFREKLPSYGMQKELVDLIDKHQVTVIS 248
Query: 79 GETGSG 84
GETG G
Sbjct: 249 GETGCG 254
>gi|505779033|ref|XP_004603219.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 [Sorex
araneus]
Length = 923
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 82/169 (48%), Positives = 111/169 (65%), Gaps = 7/169 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPGWD I++LH + F S +F IIPLHS++PTV+Q +F P GVRKIV+A
Sbjct: 405 VLVFLPGWDNISTLHDLLMSQVMFKSDKFLIIPLHSLMPTVNQTQVFKRTPPGVRKIVIA 464
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITIDD+VYV+D GK K ++FD ++NI+T+ EW+S ANAKQR+GRAGR
Sbjct: 465 TNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSNANAKQRKGRAGRVQPGH 524
Query: 309 ETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC---TTQRPGAILVFL 354
Y ++L D +L +++ + L+ +C R G I FL
Sbjct: 525 CYHLYNGLRASLLDDYQLP----EILRTPLEELCLQIKILRLGGIADFL 569
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 38/59 (64%)
Query: 26 DPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
D LD +E+ RK RY EM R+KLPS+ MR ++DM+ +Q+TVISGETG G
Sbjct: 91 DGALDQQLLEELQRKKTDLRYIEMQRFREKLPSFGMRKELVDMINGHQVTVISGETGCG 149
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Query: 316 DVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
DVL M+ D + V+ +++ +L++HI + GA+LVFLPGWD I++LH + F S
Sbjct: 374 DVLEMMDD---DKVDLNLVAALIRHIVLKEEDGAVLVFLPGWDNISTLHDLLMSQVMFKS 430
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 376 CLLY---EFAMVDNKPKEIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHPGTTA 432
CLL+ + ++ +K +E I V + + F+ A ++KELR LD LL K+ P
Sbjct: 823 CLLFFGGDISIQKDKEQETIAVDEWIVFQSPARIAHLVKELRKELDALLQEKIESPHPVD 882
Query: 433 WGD 435
W D
Sbjct: 883 WKD 885
>gi|431915209|gb|ELK15896.1| Putative ATP-dependent RNA helicase DHX36 [Pteropus alecto]
Length = 1007
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 82/169 (48%), Positives = 111/169 (65%), Gaps = 7/169 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I++LH + F S +F IIPLHS++PTV+Q +F P GVRKIV+A
Sbjct: 490 ILVFLPGWDNISTLHDLLMSQVMFKSDKFLIIPLHSLMPTVNQTQVFKRTPPGVRKIVIA 549
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITIDD+V+V+D GK K ++FD ++NI+T+ EW+S ANAKQR+GRAGR
Sbjct: 550 TNIAETSITIDDVVFVIDGGKIKETHFDTQNNISTMSAEWVSQANAKQRKGRAGRVQPGH 609
Query: 309 ETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC---TTQRPGAILVFL 354
Y ++L D +L +++ + L+ +C R G I FL
Sbjct: 610 CYHLYNGLRASLLDDYQLP----EILRTPLEELCLQIKILRLGGIAHFL 654
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 39/59 (66%)
Query: 26 DPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
D LD +++ +K RY EM R+KLPS+ M+ +++M+ N+Q+TVISGETG G
Sbjct: 176 DVTLDQQLLEDLQKKKSDLRYIEMQHFREKLPSFGMQKELVNMIDNHQVTVISGETGCG 234
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Query: 316 DVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
DV+ M+ D + V+ ++I +L++HI + GAILVFLPGWD I++LH + F S
Sbjct: 459 DVMKMMDD---DKVDLNLIAALIRHIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKS 515
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 376 CLLY---EFAMVDNKPKEIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHPGTTA 432
CLL+ + ++ + +E I V + + F+ A ++KELR LD+LL K+ P
Sbjct: 908 CLLFFGGDISIQKDNDQETIAVDEWIVFQSPARIAHLVKELRKELDILLQEKIESPHPVD 967
Query: 433 WGD 435
W D
Sbjct: 968 WKD 970
>gi|348581698|ref|XP_003476614.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 [Cavia
porcellus]
Length = 916
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 71/115 (61%), Positives = 91/115 (79%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I++LH + F S +F IIPLHS++PTV+Q +F P GVRKIV+A
Sbjct: 486 ILVFLPGWDNISTLHDLLMSQVMFKSDKFIIIPLHSLMPTVNQTQVFKRTPPGVRKIVIA 545
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITIDD+V+V+D GK K ++FD ++NI+T+ EW+S ANAKQR+GRAGR
Sbjct: 546 TNIAETSITIDDVVFVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGR 600
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 39/59 (66%)
Query: 26 DPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
D LD +++ +K RRY EM R+KLPSY M+ ++D++ +Q+TV+SGETG G
Sbjct: 172 DLTLDQQLLEDLQKKKTDRRYIEMQRFREKLPSYGMQKELVDLIDKHQVTVVSGETGCG 230
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Query: 316 DVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
DVL M+ D + V+ ++I +L+++I + GAILVFLPGWD I++LH + F S
Sbjct: 455 DVLEMMDD---DKVDLNLIAALIRYIVLEEEEGAILVFLPGWDNISTLHDLLMSQVMFKS 511
>gi|307204348|gb|EFN83103.1| Probable ATP-dependent RNA helicase DHX36 [Harpegnathos saltator]
Length = 976
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 84/202 (41%), Positives = 113/202 (55%), Gaps = 50/202 (24%)
Query: 102 YPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVYCTYTFMGVSPMKVFFCKNV 161
YP V + L P E ++ +I L++HIC T+ PGA
Sbjct: 424 YPKYVTDELAKPSSEELSLKLIEKLVRHICLTKDPGA----------------------- 460
Query: 162 LQRLMKGVGANSPKRWVKLLRSMLVVPILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIP 221
IL+FLPG I L+R M +S ++ SS+ I P
Sbjct: 461 ---------------------------ILIFLPGMMDILQLNRMMVESGYYPSSKHVIYP 493
Query: 222 LHSMLPTVSQKSIFNTPPEGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNI 281
LHS +PTV Q IF PP G+RKI++AT+IAETSITI+D++YV++CGKTK+ FD+ +NI
Sbjct: 494 LHSRMPTVDQAIIFKEPPYGIRKIIIATSIAETSITIEDVIYVINCGKTKLGRFDIHNNI 553
Query: 282 ATLKPEWISLANAKQRRGRAGR 303
TL+ EW+SLA+AKQRRGRAGR
Sbjct: 554 QTLESEWVSLASAKQRRGRAGR 575
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 39/63 (61%)
Query: 313 YPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSF 372
YP V + L P E ++ +I L++HIC T+ PGAIL+FLPG I L+R M +S +
Sbjct: 424 YPKYVTDELAKPSSEELSLKLIEKLVRHICLTKDPGAILIFLPGMMDILQLNRMMVESGY 483
Query: 373 FNS 375
+ S
Sbjct: 484 YPS 486
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 40/71 (56%)
Query: 14 VTSWETRQKLLNDPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQ 73
T+ KL + LD + E K Y+ ML+ R KLP+YQ + +L ++++NQ
Sbjct: 140 ATAMSMESKLQRNSHLDKVLQAEYNDKQNKLSYKNMLKFRLKLPAYQKKSEILQLIQDNQ 199
Query: 74 ITVISGETGSG 84
+ V+SGETG G
Sbjct: 200 VVVVSGETGCG 210
>gi|23243423|gb|AAH36035.1| DHX36 protein [Homo sapiens]
gi|123980214|gb|ABM81936.1| DEAH (Asp-Glu-Ala-His) box polypeptide 36 [synthetic construct]
Length = 979
Score = 157 bits (398), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 82/169 (48%), Positives = 110/169 (65%), Gaps = 7/169 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I++LH + F S +F IIPLHS++PTV+Q +F P GVRKIV+A
Sbjct: 491 ILVFLPGWDNISTLHDLLMSQVMFKSDKFLIIPLHSLMPTVNQTQVFKRTPPGVRKIVIA 550
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITIDD+VYV+D GK K ++FD ++N +T+ EW+S ANAKQR+GRAGR
Sbjct: 551 TNIAETSITIDDVVYVIDGGKIKETHFDTQNNNSTMSAEWVSKANAKQRKGRAGRVQPGH 610
Query: 309 ETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC---TTQRPGAILVFL 354
Y ++L D +L +++ + L+ +C R G I FL
Sbjct: 611 CYHLYNGLRASLLDDYQLP----EILRTPLEELCLQIKILRLGGIAYFL 655
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 39/59 (66%)
Query: 26 DPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
D LD +++ +K RY EM R+KLPSY M+ +++++ N+Q+TVISGETG G
Sbjct: 177 DGTLDQKLLEDLQKKKNDLRYIEMQHFREKLPSYGMQKELVNLIDNHQVTVISGETGCG 235
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Query: 316 DVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
DV+ M++D + V+ ++I +L+++I + GAILVFLPGWD I++LH + F S
Sbjct: 460 DVIEMMED---DKVDLNLIVALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKS 516
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 376 CLLY---EFAMVDNKPKEIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHPGTTA 432
CLL+ + ++ + +E I V + + F+ A ++KELR LD+LL K+ P
Sbjct: 880 CLLFFGGDISIQKDNDQETIAVDEWIVFQSPARIAHLVKELRKELDILLQEKIESPHPVD 939
Query: 433 WGD 435
W D
Sbjct: 940 WND 942
>gi|301607411|ref|XP_002933292.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 isoform 1
[Xenopus (Silurana) tropicalis]
Length = 981
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 85/181 (46%), Positives = 117/181 (64%), Gaps = 13/181 (7%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I++L+ + F S +F IIPLHS++PTV+Q +F PP GVRKIV+A
Sbjct: 464 ILVFLPGWDNISTLNDLLMSQVMFKSDKFIIIPLHSLMPTVNQTEVFKRPPPGVRKIVIA 523
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITIDD+V+V+D GK K ++FD ++NI+T+ EW+S ANAKQR+GRAGR
Sbjct: 524 TNIAETSITIDDVVHVIDGGKIKETHFDTQNNISTMTAEWVSHANAKQRKGRAGRVQPGH 583
Query: 309 ETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC---TTQRPGAILVFL------PGWDT 359
Y + ++L D +L +++ + L+ +C + G I FL P DT
Sbjct: 584 CYHLYNSLRDSLLDDYQLP----EIVRTPLEELCLQIKILKLGGIASFLRKLMDTPSRDT 639
Query: 360 I 360
I
Sbjct: 640 I 640
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 51/87 (58%), Gaps = 6/87 (6%)
Query: 1 MKSPHSPKGLTHSVTSWETRQKLLNDPV---LDAAFKKEMIRKLQSRRYQEMLEARKKLP 57
+K P P+ H+ W++ D LD K+E+ K + +Y EM + R+KLP
Sbjct: 125 LKQPAMPEEKDHA---WDSEYAAEADEAGTDLDQQLKEELHEKRTNYKYLEMQKFREKLP 181
Query: 58 SYQMRDAVLDMVRNNQITVISGETGSG 84
SY M++ ++ M+ +NQ+TVISGETG G
Sbjct: 182 SYSMKEMIIKMINSNQVTVISGETGCG 208
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 38/69 (55%)
Query: 307 RSETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRS 366
R ++Y + L+ + E V+ D+I L+++I GAILVFLPGWD I++L+
Sbjct: 421 RKLQRRYSESTIEALELADDEKVDLDLIAELIRYIVLKGEDGAILVFLPGWDNISTLNDL 480
Query: 367 MCQSSFFNS 375
+ F S
Sbjct: 481 LMSQVMFKS 489
>gi|322798986|gb|EFZ20446.1| hypothetical protein SINV_02899 [Solenopsis invicta]
Length = 933
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 87/215 (40%), Positives = 116/215 (53%), Gaps = 62/215 (28%)
Query: 101 QYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVYCTYTFMGVSPMKVFFCKN 160
+Y V+N L++P E ++ D+I L+++IC T+ PGA
Sbjct: 406 KYDARVINQLRNPVSETLSLDLIEELVRYICNTKGPGA---------------------- 443
Query: 161 VLQRLMKGVGANSPKRWVKLLRSMLVVPILVFLPGWDTINSLHRSMCQSSFFNS------ 214
IL+FLPG I++L++ M S + S
Sbjct: 444 ----------------------------ILIFLPGMLDISNLNKMMLDSERYPSRNKHHN 475
Query: 215 ------SRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLATNIAETSITIDDIVYVVDCG 268
++ I LHS LP+V QK IF PP GVRKI++AT+IAETSITI+D+VYV+DCG
Sbjct: 476 YKTFLTDKYIIYALHSRLPSVDQKLIFKEPPHGVRKIIIATSIAETSITIEDVVYVIDCG 535
Query: 269 KTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
KTK FD+ NI TL+PEW+SLANAKQRRGRAGR
Sbjct: 536 KTKFGKFDINKNIQTLEPEWVSLANAKQRRGRAGR 570
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 57/117 (48%), Gaps = 21/117 (17%)
Query: 19 TRQKLLNDPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVIS 78
+ KL + +D +KE K YQ ML+ R KLP+Y+ + +L ++ +NQ+ VIS
Sbjct: 126 AKSKLQRNSDIDRILQKEYREKQSEDAYQSMLKFRSKLPAYKKKSEILQLIEDNQVVVIS 185
Query: 79 GETGSGPPLHLDFITLKRSETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQR 135
GETG G K ++ Q+ + D ELE N S+ + ICT R
Sbjct: 186 GETGCG----------KTTQVAQF-------ILDDELEAGNG----SVTRIICTQPR 221
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 43/64 (67%)
Query: 312 QYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSS 371
+Y V+N L++P E ++ D+I L+++IC T+ PGAIL+FLPG I++L++ M S
Sbjct: 406 KYDARVINQLRNPVSETLSLDLIEELVRYICNTKGPGAILIFLPGMLDISNLNKMMLDSE 465
Query: 372 FFNS 375
+ S
Sbjct: 466 RYPS 469
>gi|198431627|ref|XP_002120730.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Ciona
intestinalis]
Length = 983
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 67/115 (58%), Positives = 90/115 (78%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+L+FLPGW I LH+ + FF S+F+I+PLHSM+P+ +Q+ +F+ PP GV KIV+A
Sbjct: 488 MLLFLPGWSDIKQLHQMISNDRFFQPSKFRILPLHSMVPSSNQQQVFDRPPVGVTKIVIA 547
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITIDDIV+V+DCGK K+ F+ NI++L EW++ ANAKQR+GRAGR
Sbjct: 548 TNIAETSITIDDIVHVIDCGKIKIRKFEAGKNISSLNAEWLTRANAKQRKGRAGR 602
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 39/52 (75%)
Query: 38 IRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHL 89
+ K +S+ + +MLE RKKLP+Y+MR ++DM++++Q+ V+SGETG G L
Sbjct: 170 LDKPRSKSHSQMLEFRKKLPTYKMRKELMDMIKSSQVVVVSGETGCGKTTQL 221
>gi|512929535|ref|XP_004931845.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Bombyx
mori]
Length = 1081
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 77/146 (52%), Positives = 96/146 (65%)
Query: 158 CKNVLQRLMKGVGANSPKRWVKLLRSMLVVPILVFLPGWDTINSLHRSMCQSSFFNSSRF 217
C +L ++ + + +KL+ S +LVFLPG I L M QS F S+F
Sbjct: 509 CTTLLDARIEDINIDLIVEVLKLISSKEPGAVLVFLPGIGDITKLMSVMEQSCEFPKSKF 568
Query: 218 QIIPLHSMLPTVSQKSIFNTPPEGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDV 277
+ PLHS LP++ Q IF PP G+RKI++ATNIAETSITIDDIVYV+DCGK K S +
Sbjct: 569 DVYPLHSRLPSLEQHKIFQRPPTGIRKIIIATNIAETSITIDDIVYVIDCGKIKYSGLSI 628
Query: 278 KDNIATLKPEWISLANAKQRRGRAGR 303
DNI+TLK EWIS AN +QRRGRAGR
Sbjct: 629 ADNISTLKTEWISQANLRQRRGRAGR 654
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 37/66 (56%)
Query: 29 LDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLH 88
L A +E L Y+ ++ R KLP+YQ + +L+M+ NNQ+ VISGETG G
Sbjct: 227 LSFAMIEEYNDMLSKDGYKLHMKFRDKLPTYQKYEELLNMINNNQVLVISGETGCGKSTQ 286
Query: 89 LDFITL 94
+ I L
Sbjct: 287 VPQIIL 292
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 316 DVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFF 373
DV L D +E +N D+I +L+ I +++ PGA+LVFLPG I L M QS F
Sbjct: 507 DVCTTLLDARIEDINIDLIVEVLKLI-SSKEPGAVLVFLPGIGDITKLMSVMEQSCEF 563
>gi|340371317|ref|XP_003384192.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 [Amphimedon
queenslandica]
Length = 940
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/205 (42%), Positives = 112/205 (54%), Gaps = 51/205 (24%)
Query: 100 QQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVYCTYTFMGVSPMKVFFCK 159
Q+Y V + L+D +LE ++ +I SLL+HI GA
Sbjct: 384 QKYGPHVASALRDMDLEKIDLHLIHSLLKHISFNMEDGA--------------------- 422
Query: 160 NVLQRLMKGVGANSPKRWVKLLRSMLVVPILVFLPGWDTINSLHRSMCQSSFF-NSSRFQ 218
ILVFLPGWDTI+ LH + F NSS+F
Sbjct: 423 -----------------------------ILVFLPGWDTISKLHDLLRSDGMFRNSSKFL 453
Query: 219 IIPLHSMLPTVSQKSIFNTPPEGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVK 278
IIPLHSM+PT SQK +F+ PP GVRKI++ATNIAETSITIDD+V+V+D GK K + +DV
Sbjct: 454 IIPLHSMMPTTSQKEVFDRPPPGVRKIIIATNIAETSITIDDVVFVIDGGKVKETTYDVA 513
Query: 279 DNIATLKPEWISLANAKQRRGRAGR 303
+ +A L+ W S A A QR+GRAGR
Sbjct: 514 NQLACLESVWESKAAATQRKGRAGR 538
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 48/97 (49%), Gaps = 8/97 (8%)
Query: 285 KPEWISLANAKQR-------RGRAGRTLKRSE-TQQYPNDVLNMLKDPELEGVNNDVIFS 336
+P W +Q + A L E Q+Y V + L+D +LE ++ +I S
Sbjct: 350 RPFWSRYGRGRQEWEEEQSLKAEAEEYLNEVERDQKYGPHVASALRDMDLEKIDLHLIHS 409
Query: 337 LLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFF 373
LL+HI GAILVFLPGWDTI+ LH + F
Sbjct: 410 LLKHISFNMEDGAILVFLPGWDTISKLHDLLRSDGMF 446
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 35/55 (63%)
Query: 30 DAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
D KE ++ Y++M+E R+ LPS+ M+D ++ V +NQ+ VISG+TG G
Sbjct: 124 DEELLKEQRQRESRPAYKKMMEFRQALPSWGMKDEIVQAVNDNQVIVISGQTGCG 178
>gi|524912211|ref|XP_005110957.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DHX36-like [Aplysia californica]
Length = 1159
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 67/115 (58%), Positives = 93/115 (80%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVF+PGW+ I L+ + +++ S ++IPLHS++PTV+Q+ IF+ PP GVRKIV+A
Sbjct: 662 ILVFVPGWEEIKKLNEMIQKTAQSRSGSLRVIPLHSLMPTVNQREIFDRPPPGVRKIVIA 721
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITIDD+V+V+DCGK K+ +F+ N+ +L+P+W+S ANAKQRRGRAGR
Sbjct: 722 TNIAETSITIDDVVFVIDCGKIKVKDFNPDMNLTSLEPQWVSKANAKQRRGRAGR 776
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 40/59 (67%)
Query: 26 DPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+P LD ++ + L + ++ +MLE R KLPSY+M++ ++ V+ NQ+ V+SGETG G
Sbjct: 356 NPTLDKEMQETSRKLLNNPQFTKMLEFRHKLPSYEMKETLVSAVQENQVLVVSGETGCG 414
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 37/54 (68%)
Query: 380 EFAMVDNKPKEIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHPGTTAW 433
E ++ ++ E+++V D + F+ STA+++KELR +LD LL K++ PG T+W
Sbjct: 1069 EIKILRDQGTELVSVDDWVIFKASASTAQVVKELRQQLDKLLTRKITRPGPTSW 1122
Score = 41.6 bits (96), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 33/58 (56%)
Query: 307 RSETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLH 364
R+ +Y + +L + ++ D+I ++ +ICT GAILVF+PGW+ I L+
Sbjct: 619 RTLIGRYDMKTIEVLNKFDYSCIDLDLIQHIIHYICTQMEDGAILVFVPGWEEIKKLN 676
>gi|190570328|ref|NP_001122016.1| probable ATP-dependent RNA helicase DHX36 [Danio rerio]
Length = 1037
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 73/124 (58%), Positives = 93/124 (75%), Gaps = 9/124 (7%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQ--IIPLHSMLPTVSQKSI-------FNTPP 239
ILVFLPGWD I++L+ + F S R++ IIPLHS++PTVSQ + F PP
Sbjct: 505 ILVFLPGWDNISTLNDLLMSDQMFKSGRYRFIIIPLHSLMPTVSQTQVISLFPQVFKKPP 564
Query: 240 EGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRG 299
GVRKIV+ATNIAETSITIDD+VYV+D GK K ++FD ++NI T+ EW+S+ANAKQR+G
Sbjct: 565 PGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNIRTMTAEWVSIANAKQRKG 624
Query: 300 RAGR 303
RAGR
Sbjct: 625 RAGR 628
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 42/64 (65%)
Query: 21 QKLLNDPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGE 80
Q ++ P LD KK+ +K + Y EML+ RKKLPSY MR+ ++ ++ N++ VISGE
Sbjct: 185 QDVVQIPFLDEELKKDQQKKEDNAAYIEMLKFRKKLPSYGMREELVRLISANRVLVISGE 244
Query: 81 TGSG 84
TG G
Sbjct: 245 TGCG 248
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Query: 316 DVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
+VL M+ D + ++ ++ +L++HI + GAILVFLPGWD I++L+ + F S
Sbjct: 473 EVLGMMDDDD--NIDLELTAALIRHIAVNENEGAILVFLPGWDNISTLNDLLMSDQMFKS 530
Query: 376 CLLYEFAMV 384
Y F ++
Sbjct: 531 G-RYRFIII 538
>gi|356553621|ref|XP_003545153.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like [Glycine
max]
Length = 1164
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 71/116 (61%), Positives = 88/116 (75%), Gaps = 1/116 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFLPGWD IN + SSFF NSS F +I LHSM+P++ QK +F PP G RKIVL
Sbjct: 564 ILVFLPGWDDINRTRERLLASSFFKNSSMFMLISLHSMVPSMEQKKVFRRPPHGCRKIVL 623
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+TNIAET+ITIDDIVYV+D G+ K ++D +N++TL+ WIS A+AKQR GRAGR
Sbjct: 624 STNIAETAITIDDIVYVIDTGRMKEKSYDAYNNVSTLQSSWISKASAKQREGRAGR 679
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 60/132 (45%), Gaps = 22/132 (16%)
Query: 258 IDDIVYVVDCGKTKMSNF--DVKDNIATLKPEWISLANAKQRRGRAGRTLKRSETQQYPN 315
+ D+ ++ CG ++F KD +A L+ ++ + A LK+ + N
Sbjct: 474 VGDMCMLLSCG----ADFCLRAKDGMAALE------IAERENQPEAAEILKKHMDSDFSN 523
Query: 316 --------DVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSM 367
D +PEL V++ +I L++ IC G ILVFLPGWD IN +
Sbjct: 524 SMEEKKLLDKYLATVNPEL--VDDVLIEQLIRKICIDSTDGGILVFLPGWDDINRTRERL 581
Query: 368 CQSSFFNSCLLY 379
SSFF + ++
Sbjct: 582 LASSFFKNSSMF 593
>gi|218184724|gb|EEC67151.1| hypothetical protein OsI_33998 [Oryza sativa Indica Group]
Length = 1006
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/170 (46%), Positives = 112/170 (65%), Gaps = 8/170 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFL GWD I+ L + ++ NS+RF +IPLH +PTV+Q+ IF+ PP +RKIVL
Sbjct: 514 ILVFLTGWDEISKLLDKIKGNNLLGNSNRFLVIPLHGSMPTVNQREIFDRPPANMRKIVL 573
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKR 307
ATNIAE+SITIDD+VYV+DCGK K +++D + +A L P WIS A+A QRRGRAGR
Sbjct: 574 ATNIAESSITIDDVVYVIDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPG 633
Query: 308 SETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRP---GAILVFL 354
+ + YP + + + +L +++ + LQ +C T + GA+ FL
Sbjct: 634 ACYRLYPKVIYDAMPQFQLP----EILRTPLQELCLTIKSLQLGAVASFL 679
Score = 42.4 bits (98), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 38 IRKLQSRR-----YQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHL 89
+R +Q+ R + M R KLP+++MR+ L V NQ+ VISGETG G L
Sbjct: 283 LRDIQNSRKMMPSARSMQSFRDKLPAFKMREEFLKAVAANQVLVISGETGCGKTTQL 339
>gi|222612987|gb|EEE51119.1| hypothetical protein OsJ_31861 [Oryza sativa Japonica Group]
Length = 1074
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/170 (46%), Positives = 112/170 (65%), Gaps = 8/170 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFL GWD I+ L + ++ NS+RF +IPLH +PTV+Q+ IF+ PP +RKIVL
Sbjct: 582 ILVFLTGWDEISKLLDKIKGNNLLGNSNRFLVIPLHGSMPTVNQREIFDRPPANMRKIVL 641
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKR 307
ATNIAE+SITIDD+VYV+DCGK K +++D + +A L P WIS A+A QRRGRAGR
Sbjct: 642 ATNIAESSITIDDVVYVIDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPG 701
Query: 308 SETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRP---GAILVFL 354
+ + YP + + + +L +++ + LQ +C T + GA+ FL
Sbjct: 702 ACYRLYPKVIYDAMPQFQLP----EILRTPLQELCLTIKSLQLGAVASFL 747
Score = 42.0 bits (97), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 38 IRKLQSRR-----YQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHL 89
+R +Q+ R + M R KLP+++MR+ L V NQ+ VISGETG G L
Sbjct: 283 LRDIQNSRKMMPSARSMQSFRDKLPAFKMREEFLKAVAANQVLVISGETGCGKTTQL 339
>gi|10440614|gb|AAG16852.1|AC069145_1 putative ATP-dependent RNA helicase [Oryza sativa Japonica Group]
Length = 869
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/170 (46%), Positives = 112/170 (65%), Gaps = 8/170 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFL GWD I+ L + ++ NS+RF +IPLH +PTV+Q+ IF+ PP +RKIVL
Sbjct: 377 ILVFLTGWDEISKLLDKIKGNNLLGNSNRFLVIPLHGSMPTVNQREIFDRPPANMRKIVL 436
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKR 307
ATNIAE+SITIDD+VYV+DCGK K +++D + +A L P WIS A+A QRRGRAGR
Sbjct: 437 ATNIAESSITIDDVVYVIDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPG 496
Query: 308 SETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRP---GAILVFL 354
+ + YP + + + +L +++ + LQ +C T + GA+ FL
Sbjct: 497 ACYRLYPKVIYDAMPQFQLP----EILRTPLQELCLTIKSLQLGAVASFL 542
Score = 42.4 bits (98), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 38 IRKLQSRR-----YQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHL 89
+R +Q+ R + M R KLP+++MR+ L V NQ+ VISGETG G L
Sbjct: 111 LRDIQNSRKMMPSARSMQSFRDKLPAFKMREEFLKAVAANQVLVISGETGCGKTTQL 167
>gi|514816313|ref|XP_004982899.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like isoform
X2 [Setaria italica]
Length = 871
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 81/173 (46%), Positives = 111/173 (64%), Gaps = 14/173 (8%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSS-RFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFL GWD I+ L + ++F SS RF ++PLH +PTV+Q+ IF+ PP +RKIVL
Sbjct: 379 ILVFLTGWDEISKLLDKIKGNTFLGSSNRFLVLPLHGSMPTVNQREIFDRPPANMRKIVL 438
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKR 307
ATNIAE+SITIDD+VYV+DCGK K +++D + +A L P WIS A+A QRRGRAGR
Sbjct: 439 ATNIAESSITIDDVVYVIDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPG 498
Query: 308 SETQQYP---NDVLNMLKDPELEGVNNDVIFSLLQHICTTQRP---GAILVFL 354
+ YP +D + + PE ++ + LQ +C T + GA+ FL
Sbjct: 499 FCYRLYPKVIHDAMPQFQLPE-------ILRTPLQELCLTIKSLQLGAVSSFL 544
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 38 IRKLQSRR-----YQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHL 89
+R LQ+ R + M R+KLP++ MR+ L V NQ+ VISGETG G L
Sbjct: 111 LRDLQNSRKMAASARSMQSFREKLPAFNMREGFLKAVAANQVLVISGETGCGKTTQL 167
>gi|514816311|ref|XP_004982898.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like isoform
X1 [Setaria italica]
Length = 902
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 81/173 (46%), Positives = 111/173 (64%), Gaps = 14/173 (8%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSS-RFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFL GWD I+ L + ++F SS RF ++PLH +PTV+Q+ IF+ PP +RKIVL
Sbjct: 410 ILVFLTGWDEISKLLDKIKGNTFLGSSNRFLVLPLHGSMPTVNQREIFDRPPANMRKIVL 469
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKR 307
ATNIAE+SITIDD+VYV+DCGK K +++D + +A L P WIS A+A QRRGRAGR
Sbjct: 470 ATNIAESSITIDDVVYVIDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPG 529
Query: 308 SETQQYP---NDVLNMLKDPELEGVNNDVIFSLLQHICTTQRP---GAILVFL 354
+ YP +D + + PE ++ + LQ +C T + GA+ FL
Sbjct: 530 FCYRLYPKVIHDAMPQFQLPE-------ILRTPLQELCLTIKSLQLGAVSSFL 575
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 38 IRKLQSRR-----YQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHL 89
+R LQ+ R + M R+KLP++ MR+ L V NQ+ VISGETG G L
Sbjct: 111 LRDLQNSRKMAASARSMQSFREKLPAFNMREGFLKAVAANQVLVISGETGCGKTTQL 167
>gi|1353239|gb|AAB01660.1| putative RNA helicase A [Arabidopsis thaliana]
Length = 1291
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 67/116 (57%), Positives = 90/116 (77%), Gaps = 1/116 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFLPGWD IN + + ++ FF +S++F II LHSM+P QK +FN PP G RKIVL
Sbjct: 554 ILVFLPGWDDINKTRQRLLENPFFADSAKFDIICLHSMVPAGEQKKVFNRPPPGCRKIVL 613
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
ATNIAE+++TIDD+VYV+D G+ K ++D +N++TL+ W+S ANAKQR+GRAGR
Sbjct: 614 ATNIAESAVTIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKANAKQRQGRAGR 669
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 327 EGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFF 373
E V+ +I L++ IC GAILVFLPGWD IN + + ++ FF
Sbjct: 531 EQVDVSLIQQLMRKICGDSEDGAILVFLPGWDDINKTRQRLLENPFF 577
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Query: 39 RKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG-----PPLHLDFIT 93
R + + +E+ + R KLP +DA+ V +NQ+ +ISGETG G P LD +
Sbjct: 170 RLKKDKALKEITKLRSKLPITSFKDAITSAVESNQVILISGETGCGKTTQVPQYLLDHMW 229
Query: 94 LKRSET 99
+ ET
Sbjct: 230 SSKRET 235
>gi|42570340|ref|NP_850154.2| protein helicase in vascular tissue and tapetum [Arabidopsis
thaliana]
gi|330253348|gb|AEC08442.1| protein helicase in vascular tissue and tapetum [Arabidopsis
thaliana]
Length = 1299
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 67/116 (57%), Positives = 90/116 (77%), Gaps = 1/116 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFLPGWD IN + + ++ FF +S++F II LHSM+P QK +FN PP G RKIVL
Sbjct: 554 ILVFLPGWDDINKTRQRLLENPFFADSAKFDIICLHSMVPAGEQKKVFNRPPPGCRKIVL 613
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
ATNIAE+++TIDD+VYV+D G+ K ++D +N++TL+ W+S ANAKQR+GRAGR
Sbjct: 614 ATNIAESAVTIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKANAKQRQGRAGR 669
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 327 EGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFF 373
E V+ +I L++ IC GAILVFLPGWD IN + + ++ FF
Sbjct: 531 EQVDVSLIQQLMRKICGDSEDGAILVFLPGWDDINKTRQRLLENPFF 577
Score = 40.0 bits (92), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Query: 39 RKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG-----PPLHLDFIT 93
R + + +E+ + R KLP +DA+ V +NQ+ +ISGETG G P LD +
Sbjct: 170 RLKKDKALKEITKLRSKLPITSFKDAITSAVESNQVILISGETGCGKTTQVPQYLLDHMW 229
Query: 94 LKRSET 99
+ ET
Sbjct: 230 SSKRET 235
>gi|20196900|gb|AAM14828.1| putative RNA helicase A [Arabidopsis thaliana]
Length = 1114
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 67/116 (57%), Positives = 90/116 (77%), Gaps = 1/116 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFLPGWD IN + + ++ FF +S++F II LHSM+P QK +FN PP G RKIVL
Sbjct: 369 ILVFLPGWDDINKTRQRLLENPFFADSAKFDIICLHSMVPAGEQKKVFNRPPPGCRKIVL 428
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
ATNIAE+++TIDD+VYV+D G+ K ++D +N++TL+ W+S ANAKQR+GRAGR
Sbjct: 429 ATNIAESAVTIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKANAKQRQGRAGR 484
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 327 EGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFF 373
E V+ +I L++ IC GAILVFLPGWD IN + + ++ FF
Sbjct: 346 EQVDVSLIQQLMRKICGDSEDGAILVFLPGWDDINKTRQRLLENPFF 392
>gi|359485181|ref|XP_002278608.2| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like [Vitis
vinifera]
Length = 1231
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 68/116 (58%), Positives = 89/116 (76%), Gaps = 1/116 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFLPGWD IN + +SFF +SS+F +I LHSM+P+V QK +F PP G RKIVL
Sbjct: 560 ILVFLPGWDDINRTREKLLSASFFKDSSKFVVISLHSMVPSVEQKKVFKRPPPGCRKIVL 619
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+TNI+ET+ITIDD+VYV+D G+ K ++D +N++TL+ WIS A+AKQR GRAGR
Sbjct: 620 STNISETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSAWISKASAKQREGRAGR 675
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 309 ETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMC 368
E QQ + L +PE+ ++ ++ LL+ IC + GAILVFLPGWD IN +
Sbjct: 522 EEQQLLDKYL-ATNNPEI--IDVALVEQLLRKICNDSKDGAILVFLPGWDDINRTREKLL 578
Query: 369 QSSFF 373
+SFF
Sbjct: 579 SASFF 583
Score = 41.6 bits (96), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 10/86 (11%)
Query: 17 WETRQKLLNDPVLDAAFKKEMIRKLQSR-----RYQEMLEARKKLPSYQMRDAVLDMVRN 71
W + + P ++ A + + L SR +++ E R KLP +D + + +
Sbjct: 138 WGKKDDIFGRPSMNKAEIAKKVELLASRIEEDPHLRQITEGRSKLPIASFKDVITSTIES 197
Query: 72 NQITVISGETGSG-----PPLHLDFI 92
+Q+ +ISGETG G P LD++
Sbjct: 198 HQVVLISGETGCGKTTQVPQFVLDYM 223
>gi|297826501|ref|XP_002881133.1| hypothetical protein ARALYDRAFT_902078 [Arabidopsis lyrata subsp.
lyrata]
gi|297326972|gb|EFH57392.1| hypothetical protein ARALYDRAFT_902078 [Arabidopsis lyrata subsp.
lyrata]
Length = 1299
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 67/116 (57%), Positives = 88/116 (75%), Gaps = 1/116 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFLPGWD IN + + + FF +S++F II LHSM+P QK +FN PP G RKIVL
Sbjct: 554 ILVFLPGWDDINKTRQRLLDNPFFADSAKFDIICLHSMVPAGEQKKVFNRPPRGCRKIVL 613
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
ATNIAE+++TIDD+VYV+D G+ K ++D +N++TL+ W+S ANAKQR GRAGR
Sbjct: 614 ATNIAESAVTIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKANAKQREGRAGR 669
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 28/47 (59%)
Query: 327 EGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFF 373
E V+ +I L++ IC GAILVFLPGWD IN + + + FF
Sbjct: 531 EQVDVSLIQQLMRKICGDSEDGAILVFLPGWDDINKTRQRLLDNPFF 577
Score = 39.3 bits (90), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Query: 39 RKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG-----PPLHLDFIT 93
R + + +E+ + R KLP +DA+ V +NQ+ +ISGETG G P LD +
Sbjct: 170 RLKKDKALKEISKMRSKLPITSYKDAITSAVESNQVILISGETGCGKTTQVPQYLLDHMW 229
Query: 94 LKRSET 99
+ ET
Sbjct: 230 SSKRET 235
>gi|302143511|emb|CBI22072.3| unnamed protein product [Vitis vinifera]
Length = 1190
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 68/116 (58%), Positives = 89/116 (76%), Gaps = 1/116 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFLPGWD IN + +SFF +SS+F +I LHSM+P+V QK +F PP G RKIVL
Sbjct: 548 ILVFLPGWDDINRTREKLLSASFFKDSSKFVVISLHSMVPSVEQKKVFKRPPPGCRKIVL 607
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+TNI+ET+ITIDD+VYV+D G+ K ++D +N++TL+ WIS A+AKQR GRAGR
Sbjct: 608 STNISETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSAWISKASAKQREGRAGR 663
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 309 ETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMC 368
E QQ + L +PE+ ++ ++ LL+ IC + GAILVFLPGWD IN +
Sbjct: 510 EEQQLLDKYL-ATNNPEI--IDVALVEQLLRKICNDSKDGAILVFLPGWDDINRTREKLL 566
Query: 369 QSSFF 373
+SFF
Sbjct: 567 SASFF 571
Score = 41.6 bits (96), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 10/86 (11%)
Query: 17 WETRQKLLNDPVLDAAFKKEMIRKLQSR-----RYQEMLEARKKLPSYQMRDAVLDMVRN 71
W + + P ++ A + + L SR +++ E R KLP +D + + +
Sbjct: 138 WGKKDDIFGRPSMNKAEIAKKVELLASRIEEDPHLRQITEGRSKLPIASFKDVITSTIES 197
Query: 72 NQITVISGETGSG-----PPLHLDFI 92
+Q+ +ISGETG G P LD++
Sbjct: 198 HQVVLISGETGCGKTTQVPQFVLDYM 223
>gi|482564508|gb|EOA28698.1| hypothetical protein CARUB_v10024926mg [Capsella rubella]
Length = 1297
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 67/116 (57%), Positives = 88/116 (75%), Gaps = 1/116 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFLPGWD IN + + ++ FF +S +F II LHSM+P QK +FN PP G RKIVL
Sbjct: 553 ILVFLPGWDDINKTRQRLLENPFFADSVKFDIICLHSMVPAGEQKKVFNRPPRGCRKIVL 612
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
ATNIAE+++TIDD+VYV+D G+ K ++D +N++TL+ W+S ANAKQR GRAGR
Sbjct: 613 ATNIAESAVTIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKANAKQREGRAGR 668
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 32/55 (58%)
Query: 327 EGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNSCLLYEF 381
E V+ +I L++ IC GAILVFLPGWD IN + + ++ FF + ++
Sbjct: 530 EQVDVSLILQLMRKICGDSEDGAILVFLPGWDDINKTRQRLLENPFFADSVKFDI 584
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Query: 39 RKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG-----PPLHLDFIT 93
R + + +E+ + R KLP RDA+ V +NQ+ +ISGETG G P LD +
Sbjct: 169 RLKKDKALKEIAKLRSKLPITSFRDAITSAVESNQVILISGETGCGKTTQVPQYLLDHMW 228
Query: 94 LKRSET 99
+ ET
Sbjct: 229 SSKRET 234
>gi|356499332|ref|XP_003518495.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like [Glycine
max]
Length = 1162
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 70/116 (60%), Positives = 87/116 (75%), Gaps = 1/116 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFLPGWD IN + S FF NSS F +I LHSM+P++ QK +F PP G RKIVL
Sbjct: 562 ILVFLPGWDDINRTRERLLASPFFKNSSMFMLISLHSMVPSMEQKKVFRHPPHGCRKIVL 621
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+TNIAET+ITIDDIVYV+D G+ K ++D +N++TL+ WIS A+AKQR GRAGR
Sbjct: 622 STNIAETAITIDDIVYVIDTGRMKEKSYDPYNNVSTLQSSWISKASAKQREGRAGR 677
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 56/128 (43%), Gaps = 14/128 (10%)
Query: 258 IDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRSETQQYPNDV 317
+ D+ ++ CG + KD + L+ ++ + A LK+ + N +
Sbjct: 472 VGDMCMLLSCGAD--CHLRAKDGMTALE------IAERENQPEAAEILKKHMDNDFSNSI 523
Query: 318 LNM-LKDPELEGVN----NDVIFS-LLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSS 371
L D L VN +DV+ L++ IC G ILVFLPGWD IN + S
Sbjct: 524 EEKKLLDKYLATVNPELVDDVLIEQLIRKICIDSTDGGILVFLPGWDDINRTRERLLASP 583
Query: 372 FFNSCLLY 379
FF + ++
Sbjct: 584 FFKNSSMF 591
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 8/59 (13%)
Query: 34 KKEMIRKLQS--------RRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
K E+ R+L++ ++++E R KLP +D++ V ++Q+ +ISGETG G
Sbjct: 158 KAEIARRLEALTSRMNNVSNLKQIIEGRSKLPIVSYKDSITSTVESHQVVLISGETGCG 216
>gi|460396098|ref|XP_004243616.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like [Solanum
lycopersicum]
Length = 1199
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 67/116 (57%), Positives = 88/116 (75%), Gaps = 1/116 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNS-SRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFLPGW+ IN + S +FN S+F +IPLHSM+P+V QK +F PP G RKIVL
Sbjct: 572 ILVFLPGWEDINRTRERLRASHYFNDQSKFSVIPLHSMVPSVEQKKVFRHPPPGCRKIVL 631
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+TNIAET+ITIDD+VYV+D G+ K ++D +N++TL+ W+S A+AKQR GRAGR
Sbjct: 632 STNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQREGRAGR 687
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 309 ETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMC 368
E QQ+ D DPEL +++ +I LL+ IC GAILVFLPGW+ IN +
Sbjct: 533 EEQQHLLDKYLSTVDPEL--IDDVLIEQLLKKICIDSEDGAILVFLPGWEDINRTRERLR 590
Query: 369 QSSFFN 374
S +FN
Sbjct: 591 ASHYFN 596
>gi|30686606|ref|NP_850255.1| RNA helicase family protein [Arabidopsis thaliana]
gi|330254083|gb|AEC09177.1| RNA helicase family protein [Arabidopsis thaliana]
Length = 995
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 79/170 (46%), Positives = 110/170 (64%), Gaps = 8/170 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFL GWD I+ L + ++F +SS+F ++PLH +PTV+Q+ IF+ PP RKIVL
Sbjct: 506 ILVFLTGWDEISKLLEKINMNNFLGDSSKFLVLPLHGSMPTVNQREIFDRPPPNKRKIVL 565
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKR 307
ATNIAE+SITIDD+VYVVDCGK K +++D + +A L P WIS A+A QRRGRAGR
Sbjct: 566 ATNIAESSITIDDVVYVVDCGKAKETSYDALNKVACLLPSWISKASAHQRRGRAGRVQAG 625
Query: 308 SETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC---TTQRPGAILVFL 354
+ YP + + +L ++I + LQ +C + + G+I FL
Sbjct: 626 VCYRLYPKVIYDAFPQYQLP----EIIRTPLQELCLHIKSLQVGSIGSFL 671
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 35 KEMIRKLQSRRYQEMLEA-RKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHL 89
KE KL++ + L+A R+KLP+++M++ L+ V NQ+ V+SGETG G L
Sbjct: 206 KERQEKLKATESVKALKAFREKLPAFKMKEEFLNSVSQNQVLVVSGETGCGKTTQL 261
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 36/67 (53%)
Query: 308 SETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSM 367
S + Y + N L+ ++ D++ + ++HIC + GAILVFL GWD I+ L +
Sbjct: 464 SHYKSYSSATRNSLEAWSGAQIDVDLVEATIEHICRLEGGGAILVFLTGWDEISKLLEKI 523
Query: 368 CQSSFFN 374
++F
Sbjct: 524 NMNNFLG 530
>gi|4510377|gb|AAD21465.1| putative ATP-dependent RNA helicase A [Arabidopsis thaliana]
Length = 993
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 79/170 (46%), Positives = 110/170 (64%), Gaps = 8/170 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFL GWD I+ L + ++F +SS+F ++PLH +PTV+Q+ IF+ PP RKIVL
Sbjct: 504 ILVFLTGWDEISKLLEKINMNNFLGDSSKFLVLPLHGSMPTVNQREIFDRPPPNKRKIVL 563
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKR 307
ATNIAE+SITIDD+VYVVDCGK K +++D + +A L P WIS A+A QRRGRAGR
Sbjct: 564 ATNIAESSITIDDVVYVVDCGKAKETSYDALNKVACLLPSWISKASAHQRRGRAGRVQAG 623
Query: 308 SETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC---TTQRPGAILVFL 354
+ YP + + +L ++I + LQ +C + + G+I FL
Sbjct: 624 VCYRLYPKVIYDAFPQYQLP----EIIRTPLQELCLHIKSLQVGSIGSFL 669
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 35 KEMIRKLQSRRYQEMLEA-RKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHL 89
KE KL++ + L+A R+KLP+++M++ L+ V NQ+ V+SGETG G L
Sbjct: 206 KERQEKLKATESVKALKAFREKLPAFKMKEEFLNSVSQNQVLVVSGETGCGKTTQL 261
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 36/67 (53%)
Query: 308 SETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSM 367
S + Y + N L+ ++ D++ + ++HIC + GAILVFL GWD I+ L +
Sbjct: 462 SHYKSYSSATRNSLEAWSGAQIDVDLVEATIEHICRLEGGGAILVFLTGWDEISKLLEKI 521
Query: 368 CQSSFFN 374
++F
Sbjct: 522 NMNNFLG 528
>gi|514685324|ref|XP_004990241.1| hypothetical protein PTSG_08854 [Salpingoeca sp. ATCC 50818]
gi|326432195|gb|EGD77765.1| hypothetical protein PTSG_08854 [Salpingoeca sp. ATCC 50818]
Length = 1022
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 66/127 (51%), Positives = 93/127 (73%), Gaps = 1/127 (0%)
Query: 178 VKLLRSMLVVPILVFLPGWDTINSLHRSMCQS-SFFNSSRFQIIPLHSMLPTVSQKSIFN 236
++ + S +L FLPGW I+ LH+ + QS F N+S++ ++PLHSM+P Q+ +F+
Sbjct: 426 IEHIDSQAAGAVLCFLPGWGEISDLHKKLTQSPRFGNASKYWVLPLHSMIPPHEQRKVFD 485
Query: 237 TPPEGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQ 296
PP GVRKIVL+TNIAETSITIDD+VYV++ GK K ++D + I+ L+ EWIS A+ +Q
Sbjct: 486 NPPAGVRKIVLSTNIAETSITIDDVVYVINTGKAKEKSYDATNQISALQAEWISRASCRQ 545
Query: 297 RRGRAGR 303
RRGRAGR
Sbjct: 546 RRGRAGR 552
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 32/45 (71%)
Query: 40 KLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
K ++ ++ + R++LPS++MR VL VR+NQ+ VISGETG G
Sbjct: 145 KTKNASFERLKPFRERLPSFKMRAEVLRAVRDNQVIVISGETGCG 189
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 329 VNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNSCLLY 379
++ D++ +++HI +Q GA+L FLPGW I+ LH+ + QS F + Y
Sbjct: 417 IDIDLVMGVIEHI-DSQAAGAVLCFLPGWGEISDLHKKLTQSPRFGNASKY 466
>gi|414871115|tpg|DAA49672.1| TPA: hypothetical protein ZEAMMB73_647732 [Zea mays]
Length = 1150
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/173 (46%), Positives = 111/173 (64%), Gaps = 14/173 (8%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNS-SRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFL GWD I+ L + ++F S +RF ++PLH +PTV+Q+ IF+ PP +RKIVL
Sbjct: 658 ILVFLTGWDEISKLLDKIKGNNFLGSPNRFLVLPLHGSMPTVNQREIFDRPPANMRKIVL 717
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKR 307
ATNIAE+SITIDD+VYV+DCGK K +++D + +A L P WIS A+A QRRGRAGR
Sbjct: 718 ATNIAESSITIDDVVYVIDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPG 777
Query: 308 SETQQYP---NDVLNMLKDPELEGVNNDVIFSLLQHICTTQRP---GAILVFL 354
+ YP +D + + PE ++ + LQ +C T + GA+ FL
Sbjct: 778 FCYRLYPKIIHDAMPQFQLPE-------ILRTPLQELCLTIKSLQLGAVSSFL 823
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 5/57 (8%)
Query: 38 IRKLQSRR-----YQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHL 89
+R+LQ+ R + M R+KLP++ MR+ L V NQ+ VISGETG G L
Sbjct: 359 LRELQNSRKTTASARSMQSFREKLPAFSMREGFLKAVAANQVLVISGETGCGKTTQL 415
>gi|460365409|ref|XP_004228595.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Solanum
lycopersicum]
Length = 993
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 78/167 (46%), Positives = 106/167 (63%), Gaps = 2/167 (1%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSR-FQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFL GWD I+ L + ++F +R F ++PLH +PTV+Q+ IF+ PP RKIVL
Sbjct: 501 ILVFLSGWDEISKLLDKIKANNFLGDARKFLVLPLHGSMPTVNQREIFDRPPANTRKIVL 560
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKR 307
ATNIAE+SITIDD+VYV+DCGK K +++D + +A L P WIS A+A QRRGRAGR
Sbjct: 561 ATNIAESSITIDDVVYVIDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPG 620
Query: 308 SETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFL 354
+ YP + + + +L + + L HI + Q GAI FL
Sbjct: 621 VCYRLYPKLIHDAMAQYQLPEILRTPLQELCLHIKSLQF-GAIESFL 666
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 38/61 (62%)
Query: 29 LDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLH 88
L+ K++ + S + +EM+ R+KLP+++++ ++ V NNQ+ V+SGETG G
Sbjct: 197 LNVELKQKQEKTRGSEKVKEMISFREKLPAFKVKSEFMEAVANNQVLVVSGETGCGKTTQ 256
Query: 89 L 89
L
Sbjct: 257 L 257
>gi|508701193|gb|EOX93089.1| ATP-dependent RNA helicase, putative isoform 2 [Theobroma cacao]
Length = 1181
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 68/116 (58%), Positives = 87/116 (75%), Gaps = 1/116 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFLPGW+ IN + + FF +SSRF II LHSM+P+ QK +F PP G RKIVL
Sbjct: 538 ILVFLPGWEDINRTREKLLANPFFKDSSRFIIISLHSMVPSAEQKKVFKRPPFGCRKIVL 597
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+TNIAE+SITIDD+VYV+D G+ K ++D +N++TL+ W+S ANAKQR GRAGR
Sbjct: 598 STNIAESSITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKANAKQREGRAGR 653
Score = 45.4 bits (106), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 308 SETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSM 367
E QQ + + + DPE+ ++ +I LL+ IC GAILVFLPGW+ IN +
Sbjct: 499 GEQQQLLDKYIEAV-DPEI--IDVVLIEQLLRKICIDTNEGAILVFLPGWEDINRTREKL 555
Query: 368 CQSSFF 373
+ FF
Sbjct: 556 LANPFF 561
>gi|508701192|gb|EOX93088.1| ATP-dependent RNA helicase, putative isoform 1 [Theobroma cacao]
gi|508701194|gb|EOX93090.1| ATP-dependent RNA helicase, putative isoform 1 [Theobroma cacao]
Length = 1207
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 68/116 (58%), Positives = 87/116 (75%), Gaps = 1/116 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFLPGW+ IN + + FF +SSRF II LHSM+P+ QK +F PP G RKIVL
Sbjct: 538 ILVFLPGWEDINRTREKLLANPFFKDSSRFIIISLHSMVPSAEQKKVFKRPPFGCRKIVL 597
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+TNIAE+SITIDD+VYV+D G+ K ++D +N++TL+ W+S ANAKQR GRAGR
Sbjct: 598 STNIAESSITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKANAKQREGRAGR 653
Score = 45.8 bits (107), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 308 SETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSM 367
E QQ + + + DPE+ ++ +I LL+ IC GAILVFLPGW+ IN +
Sbjct: 499 GEQQQLLDKYIEAV-DPEI--IDVVLIEQLLRKICIDTNEGAILVFLPGWEDINRTREKL 555
Query: 368 CQSSFF 373
+ FF
Sbjct: 556 LANPFF 561
>gi|62321269|dbj|BAD94478.1| ATP-dependent RNA helicase A like protein [Arabidopsis thaliana]
Length = 581
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 78/170 (45%), Positives = 110/170 (64%), Gaps = 8/170 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFL GWD I+ L + ++F +SS+F ++PLH +PTV+Q+ IF+ PP RKIVL
Sbjct: 92 ILVFLTGWDEISKLLEKINMNNFLGDSSKFLVLPLHGSMPTVNQREIFDRPPPNKRKIVL 151
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKR 307
ATNIA++SITIDD+VYVVDCGK K +++D + +A L P WIS A+A QRRGRAGR
Sbjct: 152 ATNIAKSSITIDDVVYVVDCGKAKETSYDALNKVACLLPSWISKASAHQRRGRAGRVQAG 211
Query: 308 SETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC---TTQRPGAILVFL 354
+ YP + + +L ++I + LQ +C + + G+I FL
Sbjct: 212 VCYRLYPKVIYDAFPQYQLP----EIIRTPLQELCLHIKSLQVGSIGSFL 257
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 36/67 (53%)
Query: 308 SETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSM 367
S + Y + N L+ ++ D++ + ++HIC + GAILVFL GWD I+ L +
Sbjct: 50 SHYKSYSSATRNSLEAWSGAQIDVDLVEATIEHICRLEGGGAILVFLTGWDEISKLLEKI 109
Query: 368 CQSSFFN 374
++F
Sbjct: 110 NMNNFLG 116
>gi|357494083|ref|XP_003617330.1| ATP-dependent RNA helicase A-like protein [Medicago truncatula]
gi|355518665|gb|AET00289.1| ATP-dependent RNA helicase A-like protein [Medicago truncatula]
Length = 1190
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 67/116 (57%), Positives = 87/116 (75%), Gaps = 1/116 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNS-SRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVF GWD IN + SSFFN+ S+F +I LHSM+PT+ QK +F PP G RKIVL
Sbjct: 556 ILVFFSGWDDINRAREKLLASSFFNNPSKFVVISLHSMVPTLEQKKVFKRPPPGCRKIVL 615
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+TN+AET++TIDDIVYV+D G+ K ++D +N++TL+ WIS A+AKQR GRAGR
Sbjct: 616 STNLAETAVTIDDIVYVIDTGRMKEKSYDPYNNVSTLQSSWISKASAKQREGRAGR 671
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 308 SETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSM 367
+E Q N L ++ PE+ V+ +I L++ ICT + G ILVF GWD IN +
Sbjct: 517 TEEQSILNKYLERVR-PEI--VDVVLIEQLIRKICTDSKDGGILVFFSGWDDINRAREKL 573
Query: 368 CQSSFFNS 375
SSFFN+
Sbjct: 574 LASSFFNN 581
>gi|449501156|ref|XP_004161293.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Cucumis
sativus]
Length = 999
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 72/155 (46%), Positives = 105/155 (67%), Gaps = 5/155 (3%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFL GWD I+ L + +++ +S +F ++PLH +PT++Q+ IF++PP G RKIVL
Sbjct: 507 ILVFLTGWDDISKLLDKVKANNYLGDSGKFLVLPLHGSMPTINQREIFDSPPPGKRKIVL 566
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKR 307
ATNIAE+SITIDD+VYV+DCGK K +++D + +A L P WIS A+A QRRGRAGR
Sbjct: 567 ATNIAESSITIDDVVYVIDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPG 626
Query: 308 SETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC 342
+ YP ++ D L+ +++ + LQ +C
Sbjct: 627 VCYRLYP----KIIHDAMLQYQLPEILRTPLQELC 657
>gi|297823399|ref|XP_002879582.1| helicase domain-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297325421|gb|EFH55841.1| helicase domain-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 996
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 78/170 (45%), Positives = 109/170 (64%), Gaps = 8/170 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFL GWD I+ L + ++ +SS+F ++PLH +PTV+Q+ IF+ PP RKIVL
Sbjct: 505 ILVFLTGWDEISKLLEKINGNNLLGDSSKFLVLPLHGSMPTVNQREIFDRPPPNKRKIVL 564
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKR 307
ATNIAE+SITIDD+VYVVDCGK K +++D + +A L P WIS A+A QRRGRAGR
Sbjct: 565 ATNIAESSITIDDVVYVVDCGKAKETSYDALNKVACLLPSWISKASAHQRRGRAGRVQAG 624
Query: 308 SETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC---TTQRPGAILVFL 354
+ YP + + +L ++I + LQ +C + + G+I FL
Sbjct: 625 VCYRLYPKVIYDAFPQYQLP----EIIRTPLQELCLHIKSLQVGSIGSFL 670
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 35 KEMIRKLQSRRYQEMLEA-RKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHL 89
K+ KL++ + L A R+KLP+++M++ L+ V NQ+ V+SGETG G L
Sbjct: 205 KDRQEKLKATESVKALHAFREKLPAFKMKEGFLNSVSENQVLVVSGETGCGKTTQL 260
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 32/56 (57%)
Query: 308 SETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSL 363
S + Y + N L+ ++ D++ + +++IC + GAILVFL GWD I+ L
Sbjct: 463 SHYKSYSSATRNSLEAWSGAQIDVDLVEATIEYICRLEGGGAILVFLTGWDEISKL 518
>gi|449437476|ref|XP_004136518.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Cucumis
sativus]
Length = 1000
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 72/155 (46%), Positives = 105/155 (67%), Gaps = 5/155 (3%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFL GWD I+ L + +++ +S +F ++PLH +PT++Q+ IF++PP G RKIVL
Sbjct: 508 ILVFLTGWDDISKLLDKVKANNYLGDSGKFLVLPLHGSMPTINQREIFDSPPPGKRKIVL 567
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKR 307
ATNIAE+SITIDD+VYV+DCGK K +++D + +A L P WIS A+A QRRGRAGR
Sbjct: 568 ATNIAESSITIDDVVYVIDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPG 627
Query: 308 SETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC 342
+ YP ++ D L+ +++ + LQ +C
Sbjct: 628 VCYRLYP----KIIHDAMLQYQLPEILRTPLQELC 658
>gi|357146579|ref|XP_003574042.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like
[Brachypodium distachyon]
Length = 869
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/173 (45%), Positives = 110/173 (63%), Gaps = 14/173 (8%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFL GWD I+ L + ++ NS++F ++PLH +PTV+Q+ IF+ P +RKIVL
Sbjct: 377 ILVFLTGWDEISKLVDKIKGNNLLGNSNKFLVLPLHGSMPTVNQREIFDKAPTNMRKIVL 436
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKR 307
ATNIAE+SITIDD+VYV+DCGK K +++D + +A L P WIS A+A QRRGRAGR
Sbjct: 437 ATNIAESSITIDDVVYVIDCGKAKETSYDALNKLACLMPSWISKASAHQRRGRAGRVQPG 496
Query: 308 SETQQYP---NDVLNMLKDPELEGVNNDVIFSLLQHICTTQRP---GAILVFL 354
+ YP +D + + PE ++ + LQ +C T + GA+ FL
Sbjct: 497 VCYRLYPKVIHDAMPQFQLPE-------ILRTPLQELCLTIKSLQLGAVASFL 542
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Query: 38 IRKLQSRR-----YQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHL 89
+R LQS + + M R+KLP+++MR+ L V +NQ+ VISGETG G L
Sbjct: 111 LRDLQSSKKMMPSARAMQSFREKLPAFKMREEFLKAVASNQVLVISGETGCGKTTQL 167
>gi|224085415|ref|XP_002307569.1| predicted protein [Populus trichocarpa]
gi|222857018|gb|EEE94565.1| predicted protein [Populus trichocarpa]
Length = 1195
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 64/116 (55%), Positives = 88/116 (75%), Gaps = 1/116 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFLPGWD IN + + FF + S+F II LHSM+P+V QK +F PP+G RKI+L
Sbjct: 549 ILVFLPGWDDINRTRERLLANPFFKDGSKFIIISLHSMVPSVEQKKVFKRPPQGCRKIIL 608
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+TNI+E++ITIDD+VYV+D G+ K ++D +N++TL+ W+S A+AKQR GRAGR
Sbjct: 609 STNISESAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQREGRAGR 664
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 53/120 (44%), Gaps = 10/120 (8%)
Query: 258 IDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQR----RGRAGRTLKRSETQQY 313
+ D+ ++ G N K + LK W N ++ R A L S QQ
Sbjct: 459 VGDVCMLLSLGAN--CNLQSKCGLTALK--WAERENQEEAAEVIRKHAQNALADSSEQQQ 514
Query: 314 PNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFF 373
D +PEL ++ +I L++ IC + GAILVFLPGWD IN + + FF
Sbjct: 515 LLDKYMATINPEL--IDVVLIEQLIKKICVDSKDGAILVFLPGWDDINRTRERLLANPFF 572
Score = 42.0 bits (97), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 8/81 (9%)
Query: 12 HSVTSWETRQK---LLNDPVLDAAFKKEMIRKLQSR-----RYQEMLEARKKLPSYQMRD 63
HS T+ +TR+K + + P A + + SR + ++++E R KLP D
Sbjct: 129 HSGTAGKTREKKDDIFSKPSRKKAEIAKKVESFASRIEKDVKLKQIVEGRSKLPIASFMD 188
Query: 64 AVLDMVRNNQITVISGETGSG 84
+ + ++Q+ +ISGETG G
Sbjct: 189 VITSTIESHQVVLISGETGCG 209
>gi|255558742|ref|XP_002520395.1| ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223540442|gb|EEF42011.1| ATP-dependent RNA helicase, putative [Ricinus communis]
Length = 1229
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 67/130 (51%), Positives = 94/130 (72%), Gaps = 5/130 (3%)
Query: 179 KLLRSMLVV----PILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKS 233
+LLR + + ILVFLPGWD I + + FF +SS+F II LHSM+P++ QK
Sbjct: 543 RLLRKICISSRDGAILVFLPGWDDIRRTREGLLANPFFKDSSKFLIISLHSMVPSMEQKK 602
Query: 234 IFNTPPEGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLAN 293
+F PP+G RKI+L+TNIAETSITIDD++YV+D G+ K ++D +N++TL+ W+S A+
Sbjct: 603 VFKRPPQGCRKIILSTNIAETSITIDDVIYVIDSGRMKEKSYDPYNNVSTLQSSWVSKAS 662
Query: 294 AKQRRGRAGR 303
+KQR GRAGR
Sbjct: 663 SKQREGRAGR 672
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 50/101 (49%), Gaps = 10/101 (9%)
Query: 278 KDNIATLKPEWISLANAKQRRGRAGRTLKRS-----ETQQYPNDVLNMLKDPELEGVNND 332
KD + L EW N + R ++ S E QQ ++ L + +PEL V+
Sbjct: 485 KDGLTAL--EWAKRENQHETAEVLKRHVEVSPTDCREQQQLLDNYLGKI-NPEL--VDVS 539
Query: 333 VIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFF 373
+I LL+ IC + R GAILVFLPGWD I + + FF
Sbjct: 540 LIERLLRKICISSRDGAILVFLPGWDDIRRTREGLLANPFF 580
Score = 38.9 bits (89), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 25/38 (65%)
Query: 47 QEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
++++E R KLP RD + V ++QI +ISGETG G
Sbjct: 171 RQIVEQRSKLPIASFRDVITSTVESHQIVLISGETGCG 208
>gi|508716601|gb|EOY08498.1| RNA helicase family protein isoform 2 [Theobroma cacao]
Length = 1006
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 73/155 (47%), Positives = 103/155 (66%), Gaps = 5/155 (3%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNS-SRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFL GWD I+ L + +SF S+F ++PLH +PT++Q+ IF+ PP RKIVL
Sbjct: 514 ILVFLTGWDDISKLLDKIKVNSFLGDLSKFLVLPLHGSMPTINQREIFDRPPPNKRKIVL 573
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKR 307
ATNIAE+SITIDD+VYV+DCGK K +++D + +A L P WIS A+A QRRGRAGR
Sbjct: 574 ATNIAESSITIDDVVYVIDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPG 633
Query: 308 SETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC 342
+ YP + + + D +L +++ + LQ +C
Sbjct: 634 VCYRLYPKLIHDAMLDYQLP----EILRTPLQELC 664
>gi|508716600|gb|EOY08497.1| RNA helicase family protein isoform 1 [Theobroma cacao]
Length = 1037
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 73/155 (47%), Positives = 103/155 (66%), Gaps = 5/155 (3%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNS-SRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFL GWD I+ L + +SF S+F ++PLH +PT++Q+ IF+ PP RKIVL
Sbjct: 545 ILVFLTGWDDISKLLDKIKVNSFLGDLSKFLVLPLHGSMPTINQREIFDRPPPNKRKIVL 604
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKR 307
ATNIAE+SITIDD+VYV+DCGK K +++D + +A L P WIS A+A QRRGRAGR
Sbjct: 605 ATNIAESSITIDDVVYVIDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPG 664
Query: 308 SETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC 342
+ YP + + + D +L +++ + LQ +C
Sbjct: 665 VCYRLYPKLIHDAMLDYQLP----EILRTPLQELC 695
>gi|508716602|gb|EOY08499.1| RNA helicase family protein isoform 3 [Theobroma cacao]
Length = 751
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 73/155 (47%), Positives = 103/155 (66%), Gaps = 5/155 (3%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNS-SRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFL GWD I+ L + +SF S+F ++PLH +PT++Q+ IF+ PP RKIVL
Sbjct: 545 ILVFLTGWDDISKLLDKIKVNSFLGDLSKFLVLPLHGSMPTINQREIFDRPPPNKRKIVL 604
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKR 307
ATNIAE+SITIDD+VYV+DCGK K +++D + +A L P WIS A+A QRRGRAGR
Sbjct: 605 ATNIAESSITIDDVVYVIDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPG 664
Query: 308 SETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC 342
+ YP + + + D +L +++ + LQ +C
Sbjct: 665 VCYRLYPKLIHDAMLDYQLP----EILRTPLQELC 695
>gi|514782446|ref|XP_004970095.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Setaria
italica]
Length = 1197
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 63/116 (54%), Positives = 87/116 (75%), Gaps = 1/116 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFLPGW+ IN + S F +SSRF ++ LHSM+P++ QK +F PP GVRKI+L
Sbjct: 559 ILVFLPGWEDINQTRERLLASPFLRDSSRFLVLSLHSMIPSLEQKKVFKRPPAGVRKIIL 618
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+TNIAET++TIDD+V+V+D G+ K ++D +N++TL W+S ANA+QR GRAGR
Sbjct: 619 STNIAETAVTIDDVVFVIDSGRMKEKSYDPYNNVSTLHASWVSKANARQREGRAGR 674
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Query: 304 TLKRSETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSL 363
T K +E + N L + ++ V +I LL IC GAILVFLPGW+ IN
Sbjct: 516 TAKSTEDNELLNKYLATINPEHIDTV---LIERLLGKICVDSNEGAILVFLPGWEDINQT 572
Query: 364 HRSMCQSSFF 373
+ S F
Sbjct: 573 RERLLASPFL 582
Score = 41.6 bits (96), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 65/146 (44%), Gaps = 29/146 (19%)
Query: 43 SRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHLDFITLKRSETQQY 102
S + ++++E R KLP +DA+ + N+Q+ +ISGETG G +T Q
Sbjct: 169 STQLRKIMEDRSKLPISSFKDAITSTLENHQVVLISGETGCG-------------KTTQV 215
Query: 103 PNDVLNMLKDPELEGVNNDVIFSLLQHIC--------TTQRPGAILVYCTYTF----MGV 150
P +L+ + +G + +I + + I + +R A+ Y G
Sbjct: 216 PQYILDHMWG---KGESCKIICTQPRRISAISVAERISAERGEAVGDTVGYKIRLESKGG 272
Query: 151 SPMKVFFCKN-VLQRLMKGVGANSPK 175
V FC N VL R++ G G N+ K
Sbjct: 273 KNSSVMFCTNGVLLRVLIGRGTNTSK 298
>gi|475626606|gb|EMT33407.1| Putative ATP-dependent RNA helicase YTHDC2 [Aegilops tauschii]
Length = 1297
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 62/115 (53%), Positives = 86/115 (74%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGW+ IN + SSF +SS+F ++ LHSM+P+ QK +F P GVRKI+L+
Sbjct: 594 ILVFLPGWEDINQTRERLLASSFRDSSKFLVLSLHSMIPSSEQKKVFKRAPAGVRKIILS 653
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAET++TIDD+V+V+D G+ K ++D +N++TL W+S ANA+QR GRAGR
Sbjct: 654 TNIAETAVTIDDVVFVIDSGRMKEKSYDPYNNVSTLHTSWVSRANARQREGRAGR 708
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 30/49 (61%)
Query: 327 EGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
E ++ +I LL+ ICT GAILVFLPGW+ IN + SSF +S
Sbjct: 571 EHIDTVLIERLLRKICTDSNEGAILVFLPGWEDINQTRERLLASSFRDS 619
>gi|470135133|ref|XP_004303378.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Fragaria
vesca subsp. vesca]
Length = 999
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 76/170 (44%), Positives = 107/170 (62%), Gaps = 8/170 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNS-SRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
+LVFL GWD I+ L + + F +F ++PLH +PTV+Q+ IF+ PP RKIVL
Sbjct: 508 VLVFLTGWDDISKLLDKIKGNRFLGDPEKFMVLPLHGSMPTVNQREIFDRPPANKRKIVL 567
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKR 307
ATNIAE+SITIDD+VYV+DCGK K +++D + +A L P WIS A+A QRRGRAGR
Sbjct: 568 ATNIAESSITIDDVVYVIDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPG 627
Query: 308 SETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC---TTQRPGAILVFL 354
+ YP M+ D L+ +++ + LQ +C + + GA+ FL
Sbjct: 628 VCYRLYP----KMIHDAMLQYQLPEILRTPLQELCLHIKSLQLGAVGSFL 673
Score = 41.6 bits (96), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 35 KEMIRKLQ-SRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHL 89
KE+ K++ S + ML R+KLP++ ++ L V NQ+ V+SGETG G L
Sbjct: 209 KELQEKMKVSNSLKAMLAFREKLPAFNVKSEFLRAVSENQVLVVSGETGCGKTTQL 264
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 23/31 (74%)
Query: 333 VIFSLLQHICTTQRPGAILVFLPGWDTINSL 363
++ + ++HIC +R GA+LVFL GWD I+ L
Sbjct: 491 LVEATVEHICRYERDGAVLVFLTGWDDISKL 521
>gi|473891911|gb|EMS48785.1| putative ATP-dependent RNA helicase YTHDC2 [Triticum urartu]
Length = 1185
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 63/115 (54%), Positives = 86/115 (74%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGW+ IN + SSF +SS+F ++ LHSM+P+ QK +F P GVRKI+L+
Sbjct: 592 ILVFLPGWEDINQTRERLLASSFRDSSKFLVLSLHSMIPSSEQKKVFKRAPAGVRKIILS 651
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAET++TIDDIV+V+D G+ K ++D +N++TL W+S ANA+QR GRAGR
Sbjct: 652 TNIAETAVTIDDIVFVLDSGRMKEKSYDPYNNVSTLHTSWVSRANARQREGRAGR 706
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 30/49 (61%)
Query: 327 EGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
E ++ +I LL+ ICT GAILVFLPGW+ IN + SSF +S
Sbjct: 569 EHIDTVLIERLLRKICTDSNEGAILVFLPGWEDINQTRERLLASSFRDS 617
>gi|156374273|ref|XP_001629732.1| predicted protein [Nematostella vectensis]
gi|156216739|gb|EDO37669.1| predicted protein [Nematostella vectensis]
Length = 802
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 65/116 (56%), Positives = 89/116 (76%), Gaps = 2/116 (1%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVF+PGW+ I+ LH ++ ++ S + +IPLHS++PT +Q+ +F+ PP GVRKIV+A
Sbjct: 281 ILVFMPGWEDISKLHENLKRT--LPSDKCLLIPLHSLMPTANQRQVFDRPPLGVRKIVIA 338
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT 304
TNIAETSITIDD+V+VVDCGK K ++D I+ L P WIS A+++QRRGRAGR
Sbjct: 339 TNIAETSITIDDVVFVVDCGKVKEKSYDASRKISCLMPVWISTASSRQRRGRAGRV 394
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 42/67 (62%)
Query: 312 QYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSS 371
++ + +++ +L+ ++ D+ L+QHIC GAILVF+PGW+ I+ LH ++ ++
Sbjct: 243 RFHGSTIETMENMDLDQIDFDLAVKLIQHICLNMEAGAILVFMPGWEDISKLHENLKRTL 302
Query: 372 FFNSCLL 378
+ CLL
Sbjct: 303 PSDKCLL 309
>gi|482562150|gb|EOA26340.1| hypothetical protein CARUB_v10022557mg [Capsella rubella]
Length = 1037
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 78/170 (45%), Positives = 106/170 (62%), Gaps = 8/170 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFL GWD I+ L + +SS+F I+PLH +PTV+Q+ IF+ PP RKIVL
Sbjct: 546 ILVFLTGWDEISKLLEKFNGNRLLGDSSKFLILPLHGSMPTVNQREIFDRPPPNKRKIVL 605
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKR 307
TNIAE+SITIDD+VYVVDCGK K +++D + +A L P WIS A+A QRRGRAGR
Sbjct: 606 TTNIAESSITIDDVVYVVDCGKAKETSYDALNKVACLLPSWISKASAHQRRGRAGRVQAG 665
Query: 308 SETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC---TTQRPGAILVFL 354
+ YP + + +L ++I + LQ +C + + G+I FL
Sbjct: 666 VCYRLYPKVIYDSFPQYQLP----EIIRTPLQELCLHIKSLKVGSIGSFL 711
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 10/89 (11%)
Query: 1 MKSPHSPKGLTHSVTSWETRQKLLNDPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQ 60
+K P S L+ S L AA ++ R + + + + R+KLP+++
Sbjct: 223 LKRPDSASKLSDS----------LEKEKFSAALRERQERLKATESVKALQDFREKLPAFK 272
Query: 61 MRDAVLDMVRNNQITVISGETGSGPPLHL 89
M++ L V NQ+ V+SGETG G L
Sbjct: 273 MKEGFLKSVSENQVLVVSGETGCGKTTQL 301
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 25/35 (71%)
Query: 329 VNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSL 363
++ D++ + ++HIC + GAILVFL GWD I+ L
Sbjct: 525 IDLDLVEATIEHICRHEGDGAILVFLTGWDEISKL 559
>gi|357620059|gb|EHJ72384.1| putative DEAH box polypeptide 36 [Danaus plexippus]
Length = 1021
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 65/115 (56%), Positives = 86/115 (74%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPG I L R M ++ F +++++I PLHS LPT+ Q IF PP+ +RKI++A
Sbjct: 483 ILVFLPGIGDITKLMRMMESTNLFPANKYEIYPLHSRLPTLEQHKIFERPPDNIRKIIIA 542
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITIDD+VYVVD + KM +V+ N++TL+ EW+S AN +QRRGRAGR
Sbjct: 543 TNIAETSITIDDVVYVVDSARIKMKGLNVEMNLSTLQTEWVSQANLRQRRGRAGR 597
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 37/66 (56%)
Query: 29 LDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLH 88
L+ AF E L+ Y+ ML+ RKKLP+Y ++ + +NQ+ VISGETG G
Sbjct: 175 LNEAFFIEYEDMLERNTYKNMLKFRKKLPAYIKAKELIKSINDNQVIVISGETGCGKSTQ 234
Query: 89 LDFITL 94
+ I L
Sbjct: 235 VPQIIL 240
Score = 42.7 bits (99), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Query: 296 QRRGRAGRTLKRSETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLP 355
Q R G L+ S+ + L+D +E ++ +++ LL +IC + PGAILVFLP
Sbjct: 431 QYRAEIGNWLE-SKKKNLSLQTYKTLQDSRIEELSFELLVDLLIYICKGE-PGAILVFLP 488
Query: 356 GWDTINSLHRSMCQSSFF 373
G I L R M ++ F
Sbjct: 489 GIGDITKLMRMMESTNLF 506
>gi|242054513|ref|XP_002456402.1| hypothetical protein SORBIDRAFT_03g035700 [Sorghum bicolor]
gi|241928377|gb|EES01522.1| hypothetical protein SORBIDRAFT_03g035700 [Sorghum bicolor]
Length = 1299
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 63/116 (54%), Positives = 87/116 (75%), Gaps = 1/116 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFLPGW+ IN + S FF +SSRF ++ LHSM+P+ QK +F PP GVRKI+L
Sbjct: 672 ILVFLPGWEDINQTRERLFASPFFRDSSRFLVLSLHSMIPSSEQKKVFKRPPAGVRKIIL 731
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+TNIAET++TIDD+V+V+D G+ K ++D +N++TL W+S A+A+QR GRAGR
Sbjct: 732 STNIAETAVTIDDVVFVIDSGRMKEKSYDPYNNVSTLHASWVSKASARQREGRAGR 787
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 308 SETQQYPNDVLN-MLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRS 366
SE N++LN L E ++ +I LL IC GAILVFLPGW+ IN
Sbjct: 629 SEKSTEDNELLNKYLATINPEHIDTLLIERLLGKICVDSNEGAILVFLPGWEDINQTRER 688
Query: 367 MCQSSFF 373
+ S FF
Sbjct: 689 LFASPFF 695
Score = 38.9 bits (89), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 29 LDAAFKKEMIRKLQSRRYQ--EMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
LD K EM+ + YQ +++E R KLP +D + + N+Q+ +ISG+TG G
Sbjct: 261 LDITKKVEMLASKVNGSYQLRKIMEDRTKLPISSFKDVITSTLENHQVVLISGQTGCG 318
>gi|218189117|gb|EEC71544.1| hypothetical protein OsI_03881 [Oryza sativa Indica Group]
Length = 1277
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 66/130 (50%), Positives = 93/130 (71%), Gaps = 5/130 (3%)
Query: 179 KLLRSMLV----VPILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKS 233
+LLR + V ILVFLPGW+ IN + S FF +SS+F ++ LHSM+P+ QK
Sbjct: 623 RLLRKICVDSNEGAILVFLPGWEDINQTRERLLASPFFQDSSKFLVLSLHSMIPSSEQKK 682
Query: 234 IFNTPPEGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLAN 293
+F PP G RKI+L+TNIAET++TIDD+V+V+D G+ K ++D +N++TL W+S AN
Sbjct: 683 VFKRPPAGSRKIILSTNIAETAVTIDDVVFVIDSGRMKEKSYDPYNNVSTLHSSWVSKAN 742
Query: 294 AKQRRGRAGR 303
A+QR+GRAGR
Sbjct: 743 ARQRQGRAGR 752
Score = 46.6 bits (109), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 315 NDVLN-MLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFF 373
N++LN L E ++ +I LL+ IC GAILVFLPGW+ IN + S FF
Sbjct: 601 NELLNKYLATINPEHIDTVLIERLLRKICVDSNEGAILVFLPGWEDINQTRERLLASPFF 660
>gi|462400196|gb|EMJ05864.1| hypothetical protein PRUPE_ppa000803mg [Prunus persica]
Length = 998
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 76/170 (44%), Positives = 108/170 (63%), Gaps = 8/170 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNS-SRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFL GWD I+ L + + F +++ ++PLH +PTV+Q+ IF+ PP RKIVL
Sbjct: 506 ILVFLTGWDDISKLLDKIKGNRFLGDPTKYMVLPLHGSMPTVNQREIFDRPPLNKRKIVL 565
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKR 307
ATNIAE+SITIDD+VYV+DCGK K +++D + +A L P WIS A+A QRRGRAGR
Sbjct: 566 ATNIAESSITIDDVVYVIDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPG 625
Query: 308 SETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC---TTQRPGAILVFL 354
+ YP M+ D L+ +++ + LQ +C + + GA+ FL
Sbjct: 626 VCYRLYP----KMIHDAMLQYQLPEILRTPLQELCLHIKSLQLGAVGSFL 671
Score = 42.0 bits (97), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 11/95 (11%)
Query: 3 SPHSPKGLTHSVTSWETRQKLLNDPVLDAAFKKEMIRKLQSRRYQ--------EMLEARK 54
S K + SV S + +L D V + K+++ R+L+ R+ Q M R+
Sbjct: 170 SGQGSKQTSASVNSSKPVSQLEPDTVKE---KEKLSRQLKERQEQMKVSNSLKAMQLFRE 226
Query: 55 KLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHL 89
KLP+++M+ L V NQ+ V+SGETG G L
Sbjct: 227 KLPAFKMKSEFLRAVSENQVLVVSGETGCGKTTQL 261
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 333 VIFSLLQHICTTQRPGAILVFLPGWDTINSL 363
++ + ++HIC +R GAILVFL GWD I+ L
Sbjct: 489 LVEATIEHICRHERDGAILVFLTGWDDISKL 519
>gi|115440165|ref|NP_001044362.1| Os01g0767700 [Oryza sativa Japonica Group]
gi|53792445|dbj|BAD53353.1| putative DEIH-box RNA/DNA helicase [Oryza sativa Japonica Group]
gi|53793557|dbj|BAD53327.1| putative DEIH-box RNA/DNA helicase [Oryza sativa Japonica Group]
gi|113533893|dbj|BAF06276.1| Os01g0767700 [Oryza sativa Japonica Group]
Length = 1223
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 66/130 (50%), Positives = 93/130 (71%), Gaps = 5/130 (3%)
Query: 179 KLLRSMLV----VPILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKS 233
+LLR + V ILVFLPGW+ IN + S FF +SS+F ++ LHSM+P+ QK
Sbjct: 569 RLLRKICVDSNEGAILVFLPGWEDINQTRERLLASPFFQDSSKFLVLSLHSMIPSSEQKK 628
Query: 234 IFNTPPEGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLAN 293
+F PP G RKI+L+TNIAET++TIDD+V+V+D G+ K ++D +N++TL W+S AN
Sbjct: 629 VFKRPPAGSRKIILSTNIAETAVTIDDVVFVIDSGRMKEKSYDPYNNVSTLHSSWVSKAN 688
Query: 294 AKQRRGRAGR 303
A+QR+GRAGR
Sbjct: 689 ARQRQGRAGR 698
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 315 NDVLN-MLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFF 373
N++LN L E ++ +I LL+ IC GAILVFLPGW+ IN + S FF
Sbjct: 547 NELLNKYLATINPEHIDTVLIERLLRKICVDSNEGAILVFLPGWEDINQTRERLLASPFF 606
Score = 38.5 bits (88), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 29/43 (67%)
Query: 42 QSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+S + +++++ R KLP +DA+ + N+Q+ +ISGETG G
Sbjct: 192 KSEQLRKIVQDRSKLPISSYKDAISSTLENHQVVLISGETGCG 234
>gi|255566157|ref|XP_002524066.1| ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223536634|gb|EEF38276.1| ATP-dependent RNA helicase, putative [Ricinus communis]
Length = 994
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 77/167 (46%), Positives = 104/167 (62%), Gaps = 2/167 (1%)
Query: 189 ILVFLPGWDTINSL-HRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFL GWD I+ L R + S+F ++PLH +PT++Q+ IF+ PP RKIVL
Sbjct: 502 ILVFLTGWDEISKLLDRVKGNKLLGDQSKFLVLPLHGSMPTINQREIFDRPPPNKRKIVL 561
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKR 307
ATNIAE+SITIDD+VYVVDCGK K +++D + +A L P WIS A+A QRRGRAGR
Sbjct: 562 ATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPG 621
Query: 308 SETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFL 354
+ YP + + + +L + + L HI + Q GA+ FL
Sbjct: 622 VCYRLYPKIIHDAMLQYQLPEILRTPLQELCLHIKSLQL-GAVGSFL 667
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 2 KSPHSPKGLTHSVTSWETRQKLLNDPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQM 61
+S PK +T V++ ET L K+ + + S +EM R+KLP+++M
Sbjct: 174 RSSTGPK-ITKPVSTIETDSA---KEKLSLELKQRRDKTMASDSLKEMQSFREKLPAFKM 229
Query: 62 RDAVLDMVRNNQITVISGETGSGPPLHL 89
+ L V NQ+ VISGETG G L
Sbjct: 230 KGEFLKAVAENQVLVISGETGCGKTTQL 257
>gi|222619309|gb|EEE55441.1| hypothetical protein OsJ_03588 [Oryza sativa Japonica Group]
Length = 1286
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 66/130 (50%), Positives = 93/130 (71%), Gaps = 5/130 (3%)
Query: 179 KLLRSMLV----VPILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKS 233
+LLR + V ILVFLPGW+ IN + S FF +SS+F ++ LHSM+P+ QK
Sbjct: 632 RLLRKICVDSNEGAILVFLPGWEDINQTRERLLASPFFQDSSKFLVLSLHSMIPSSEQKK 691
Query: 234 IFNTPPEGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLAN 293
+F PP G RKI+L+TNIAET++TIDD+V+V+D G+ K ++D +N++TL W+S AN
Sbjct: 692 VFKRPPAGSRKIILSTNIAETAVTIDDVVFVIDSGRMKEKSYDPYNNVSTLHSSWVSKAN 751
Query: 294 AKQRRGRAGR 303
A+QR+GRAGR
Sbjct: 752 ARQRQGRAGR 761
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 315 NDVLN-MLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFF 373
N++LN L E ++ +I LL+ IC GAILVFLPGW+ IN + S FF
Sbjct: 610 NELLNKYLATINPEHIDTVLIERLLRKICVDSNEGAILVFLPGWEDINQTRERLLASPFF 669
Score = 38.1 bits (87), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 29/43 (67%)
Query: 42 QSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+S + +++++ R KLP +DA+ + N+Q+ +ISGETG G
Sbjct: 261 KSEQLRKIVQDRSKLPISSYKDAISSTLENHQVVLISGETGCG 303
>gi|357131041|ref|XP_003567152.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2 [Brachypodium
distachyon]
Length = 1272
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 63/116 (54%), Positives = 88/116 (75%), Gaps = 1/116 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
+LVFLPGW+ IN + S F +SS+F I+ LHSM+P+V QK +F +PP GVRKI+L
Sbjct: 633 VLVFLPGWEDINQTRERLFASPLFQDSSKFLILSLHSMIPSVEQKKVFKSPPVGVRKIIL 692
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+TNIAET++TIDD+V+V+D GK K ++D +N++TL W+S A+A+QR GRAGR
Sbjct: 693 STNIAETAVTIDDVVFVIDSGKMKEKSYDPYNNVSTLHTSWVSRASARQREGRAGR 748
Score = 42.7 bits (99), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 315 NDVLN-MLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFF 373
N++LN L E ++ +I LL+ IC GA+LVFLPGW+ IN + S F
Sbjct: 597 NELLNRYLTTINPEHIDTVLIERLLRKICIDSNEGAVLVFLPGWEDINQTRERLFASPLF 656
Score = 42.4 bits (98), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 29/43 (67%)
Query: 42 QSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+SR+ ++++E R KLP +D + + NNQ+ +ISGETG G
Sbjct: 242 ESRQLRKIVEDRSKLPISSFKDHISSTLENNQVVLISGETGCG 284
>gi|478250382|gb|ENN70877.1| hypothetical protein YQE_12282, partial [Dendroctonus ponderosae]
Length = 889
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 70/115 (60%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPG+ IN L + S F R+ IIPLHS LPTV QK IF+ PP+G+ KI++A
Sbjct: 383 ILVFLPGFGEINKLCNLLTDSHQFPPRRYLIIPLHSQLPTVDQKRIFDPPPQGITKIIIA 442
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITIDD+ V+D G K+SN D I TLKPE +S ANA QRRGRAGR
Sbjct: 443 TNIAETSITIDDVTTVIDSGYIKVSNLDPATGIETLKPELVSQANAAQRRGRAGR 497
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 312 QYPNDVLNMLKDPELEGVNNDVIFSLLQHICTT-QRPGAILVFLPGWDTINSLHRSMCQS 370
+Y DVLN L E E ++ +++F LL+ IC GAILVFLPG+ IN L + S
Sbjct: 344 KYSRDVLNQLIKMESEQLDVNLVFELLRTICRKGHSDGAILVFLPGFGEINKLCNLLTDS 403
Query: 371 SFF 373
F
Sbjct: 404 HQF 406
>gi|168022099|ref|XP_001763578.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685371|gb|EDQ71767.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1143
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 66/116 (56%), Positives = 87/116 (75%), Gaps = 1/116 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
+LVFLPGW+ I+ L + S F N SRF ++PLHS++P+ Q+ +F +PP GV KIVL
Sbjct: 583 VLVFLPGWEDISRLRECLQVSPIFGNPSRFLLLPLHSLVPSSEQRKVFQSPPSGVCKIVL 642
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
ATNIAET+ITIDDIVYV+D G+ K ++D N++TL+ WIS A+AKQR GRAGR
Sbjct: 643 ATNIAETAITIDDIVYVIDTGRMKEKSYDPYSNVSTLQTVWISKASAKQREGRAGR 698
>gi|470140248|ref|XP_004305853.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like
[Fragaria vesca subsp. vesca]
Length = 1222
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 64/116 (55%), Positives = 86/116 (74%), Gaps = 1/116 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFLPGWD IN + + +F + S+ IIPLHS +P QK +F+ PP G RKIVL
Sbjct: 554 ILVFLPGWDDINKTRDRLLMNPYFRDPSKCVIIPLHSSVPAAEQKKVFSRPPSGCRKIVL 613
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+TNIAET++TIDD+VYV+D G+ K N+D +N++TL+ W+S A+AKQR+GRAGR
Sbjct: 614 STNIAETAVTIDDVVYVIDTGRMKEKNYDPFNNVSTLQSSWVSKASAKQRQGRAGR 669
Score = 45.4 bits (106), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%)
Query: 327 EGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFF 373
E ++ +I LL IC+ + GAILVFLPGWD IN + + +F
Sbjct: 531 ENIDFILIEQLLTKICSDSKDGAILVFLPGWDDINKTRDRLLMNPYF 577
>gi|413952304|gb|AFW84953.1| hypothetical protein ZEAMMB73_997107 [Zea mays]
Length = 985
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 66/130 (50%), Positives = 93/130 (71%), Gaps = 5/130 (3%)
Query: 179 KLLRSMLV----VPILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKS 233
+LLR + V ILVFLPGW+ I+ + S FF +SSRF ++ LHSM+P+ QK
Sbjct: 621 RLLRKICVDSNEGAILVFLPGWEDISQTRERLFASPFFQDSSRFLVLSLHSMIPSSEQKK 680
Query: 234 IFNTPPEGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLAN 293
+F PP GVRKI+L+TNIAET++TIDD+V+V+D G+ K ++D +N++TL W+S A+
Sbjct: 681 VFKRPPVGVRKIILSTNIAETAVTIDDVVFVIDSGRMKEKSYDPYNNVSTLHASWVSKAS 740
Query: 294 AKQRRGRAGR 303
A+QR GRAGR
Sbjct: 741 ARQREGRAGR 750
Score = 45.4 bits (106), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 308 SETQQYPNDVLN-MLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRS 366
SE N++LN L E ++ +I LL+ IC GAILVFLPGW+ I+
Sbjct: 592 SEKSTEDNELLNKYLASINPEHIDTLLIERLLRKICVDSNEGAILVFLPGWEDISQTRER 651
Query: 367 MCQSSFFN 374
+ S FF
Sbjct: 652 LFASPFFQ 659
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 70/162 (43%), Gaps = 31/162 (19%)
Query: 29 LDAAFKKEMIRKL--QSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPP 86
LD K EM+ S + ++++E R KLP +D + + N+Q+ +ISG+TG G
Sbjct: 232 LDITKKVEMLASKINGSEQLRKVMEDRTKLPISSFKDVITSTLENHQVVLISGQTGCG-- 289
Query: 87 LHLDFITLKRSETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC--------TTQRPGA 138
+T Q P +L+ + +G + +I + + I + +R A
Sbjct: 290 -----------KTTQVPQYILDHMWG---KGESCKIICTQPRRISAISVAERISAERGEA 335
Query: 139 ILVYCTYTF----MGVSPMKVFFCKN-VLQRLMKGVGANSPK 175
+ Y G V FC N VL RL+ G G N+ K
Sbjct: 336 VGDTVGYKIRLESKGGKNSSVLFCTNGVLLRLLIGRGTNASK 377
>gi|224138290|ref|XP_002322777.1| predicted protein [Populus trichocarpa]
gi|222867407|gb|EEF04538.1| predicted protein [Populus trichocarpa]
Length = 1022
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 74/170 (43%), Positives = 108/170 (63%), Gaps = 8/170 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
+LVFL GWD I+ L + + + S+F ++PLH +PT++Q+ IF+ PP RKIVL
Sbjct: 530 VLVFLTGWDEISKLLEQIKGNKLLGDQSKFLVLPLHGSMPTINQREIFDRPPPNKRKIVL 589
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKR 307
ATNIAE+SITIDD+VYVVDCGK K +++D + +A L P W+S A+A QRRGRAGR
Sbjct: 590 ATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWVSKASAHQRRGRAGRLQPG 649
Query: 308 SETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC---TTQRPGAILVFL 354
+ YP ++ D L+ +++ + LQ +C + + GA+ FL
Sbjct: 650 VCYRLYP----KIIHDSMLQYQLPEILRTPLQELCLHIKSLQLGAVGSFL 695
Score = 45.4 bits (106), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 36/67 (53%), Gaps = 7/67 (10%)
Query: 30 DAAFKKEMIRKLQ-------SRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETG 82
DAA +K+ I Q S +EM R+KLP+++MR L V NQ+ VISGETG
Sbjct: 192 DAAKEKQSIELKQKQDKLKASSSVKEMQSFREKLPAFKMRTEFLKAVAENQVLVISGETG 251
Query: 83 SGPPLHL 89
G L
Sbjct: 252 CGKTTQL 258
>gi|356534552|ref|XP_003535817.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Glycine
max]
Length = 990
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 73/155 (47%), Positives = 102/155 (65%), Gaps = 5/155 (3%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFL GWD I+ L + ++ +SS+F I+PLH +PTV+Q IF+ PP RKIVL
Sbjct: 503 ILVFLTGWDEISKLLDKLKGNNLVGDSSKFLILPLHGSMPTVNQCEIFDRPPPNKRKIVL 562
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKR 307
ATNIAE+SITIDD+VYV+DCGK K +++D + +A L P WIS A+A QRRGRAGR
Sbjct: 563 ATNIAESSITIDDVVYVIDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPG 622
Query: 308 SETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC 342
+ YP + + + +L +++ + LQ +C
Sbjct: 623 VCYRLYPKLIHDAMPQYQLA----EILRTPLQELC 653
Score = 45.4 bits (106), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%)
Query: 13 SVTSWETRQKLLNDPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNN 72
++ S +RQ + L A K+ S +EM R+KLP+++M+ L V+ N
Sbjct: 184 TIKSVSSRQADSSKEKLSVALKEGQELVQASDSLKEMKSFREKLPAFKMKSEFLKAVQEN 243
Query: 73 QITVISGETGSGPPLHL 89
Q+ V+SGETG G L
Sbjct: 244 QVLVVSGETGCGKTTQL 260
>gi|255078500|ref|XP_002502830.1| predicted protein [Micromonas sp. RCC299]
gi|226518096|gb|ACO64088.1| predicted protein [Micromonas sp. RCC299]
Length = 597
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 61/115 (53%), Positives = 83/115 (72%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPGW+ I+ L +M F+ ++PLHSM+P QK +F PP GVRK+VLA
Sbjct: 333 VLVFLPGWNEISQLRDNMAADPRFSDGTTLVLPLHSMVPPQDQKRVFQRPPRGVRKVVLA 392
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAET++TIDD+V+VVD G+ K ++D ++TL+ WIS A+A+QRRGRAGR
Sbjct: 393 TNIAETAVTIDDVVFVVDSGRLKEKSYDAHTGVSTLQAAWISRASAQQRRGRAGR 447
>gi|359481069|ref|XP_002264021.2| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Vitis
vinifera]
Length = 991
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 71/155 (45%), Positives = 102/155 (65%), Gaps = 5/155 (3%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQII-PLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFL GWD I++L + ++F R ++ PLH +PT++Q+ IF+ PP +RKIVL
Sbjct: 501 ILVFLTGWDDISNLLDKVKGNNFLGDPRKNLVLPLHGSMPTINQREIFDRPPSNMRKIVL 560
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKR 307
ATNIAE+SITIDD+VYV+DCGK K +++D + +A L P WIS A+A QRRGRAGR
Sbjct: 561 ATNIAESSITIDDVVYVIDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPG 620
Query: 308 SETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC 342
+ YP M+ + L+ +++ + LQ +C
Sbjct: 621 VCYRLYP----KMIHEAMLQFQLPEILRTPLQELC 651
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 35 KEMIRKLQSRRYQEMLEA-RKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHL 89
K+ K++ +M++A R+KLP+++M+ L V +NQ+ V+SGET G L
Sbjct: 202 KQNHEKMKGSNSVKMMQAFREKLPAFKMKSEFLKAVADNQVLVVSGETSCGKTTQL 257
>gi|296089375|emb|CBI39147.3| unnamed protein product [Vitis vinifera]
Length = 1356
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 71/155 (45%), Positives = 102/155 (65%), Gaps = 5/155 (3%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQII-PLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFL GWD I++L + ++F R ++ PLH +PT++Q+ IF+ PP +RKIVL
Sbjct: 866 ILVFLTGWDDISNLLDKVKGNNFLGDPRKNLVLPLHGSMPTINQREIFDRPPSNMRKIVL 925
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKR 307
ATNIAE+SITIDD+VYV+DCGK K +++D + +A L P WIS A+A QRRGRAGR
Sbjct: 926 ATNIAESSITIDDVVYVIDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPG 985
Query: 308 SETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC 342
+ YP M+ + L+ +++ + LQ +C
Sbjct: 986 VCYRLYP----KMIHEAMLQFQLPEILRTPLQELC 1016
Score = 40.0 bits (92), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 35 KEMIRKLQSRRYQEMLEA-RKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHL 89
K+ K++ +M++A R+KLP+++M+ L V +NQ+ V+SGET G L
Sbjct: 272 KQNHEKMKGSNSVKMMQAFREKLPAFKMKSEFLKAVADNQVLVVSGETSCGKTTQL 327
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 331 NDVIFSLLQHICTTQRPGAILVFLPGWDTINSL 363
N + + ++HIC + GAILVFL GWD I++L
Sbjct: 847 NQFVEATIEHICRHEGEGAILVFLTGWDDISNL 879
>gi|195100188|ref|XP_001998002.1| GH23801 [Drosophila grimshawi]
gi|193891563|gb|EDV90429.1| GH23801 [Drosophila grimshawi]
Length = 454
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 118/213 (55%), Gaps = 55/213 (25%)
Query: 96 RSETQQYPNDVLNMLKDPELEGVNN-DVIFSLLQHICTTQRPGAILVYCTYTFMGVSPMK 154
R + Y N VL+ L+ PE EG + D + L+ +IC++Q GA
Sbjct: 221 RRQRGSYDNKVLDQLRLPESEGCEDIDFVADLVYYICSSQSSGA---------------- 264
Query: 155 VFFCKNVLQRLMKGVGANSPKRWVKLLRSMLVVPILVFLPGWDTINSLHRSMC--QSSFF 212
ILVF+PG+D I+ LH ++ +S+
Sbjct: 265 ----------------------------------ILVFMPGYDKISKLHNTLTNPRSALG 290
Query: 213 NSSRFQII--PLHSMLPTVSQKSIFNTPPEGVRKIVLATNIAETSITIDDIVYVVDCGKT 270
R Q+I PLHS+LP+V Q+S+F P+G RK++++T IAETS+TIDD+VYV++ G+T
Sbjct: 291 QRWRDQLIVYPLHSLLPSVEQQSVFRRAPQGKRKVIISTIIAETSVTIDDVVYVINTGRT 350
Query: 271 KMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
K++++D++ NI L+ W++LAN +QR+GRAGR
Sbjct: 351 KVTSYDIETNIQALEECWVTLANTQQRKGRAGR 383
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 307 RSETQQYPNDVLNMLKDPELEGVNN-DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHR 365
R + Y N VL+ L+ PE EG + D + L+ +IC++Q GAILVF+PG+D I+ LH
Sbjct: 221 RRQRGSYDNKVLDQLRLPESEGCEDIDFVADLVYYICSSQSSGAILVFMPGYDKISKLHN 280
Query: 366 SM 367
++
Sbjct: 281 TL 282
>gi|302793863|ref|XP_002978696.1| hypothetical protein SELMODRAFT_50132 [Selaginella moellendorffii]
gi|300153505|gb|EFJ20143.1| hypothetical protein SELMODRAFT_50132 [Selaginella moellendorffii]
Length = 908
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 62/116 (53%), Positives = 84/116 (72%), Gaps = 1/116 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
+LVFLPGW+ I + S F+ + +RF I+PLHSM+P QK IF PP G RKIVL
Sbjct: 381 VLVFLPGWEDITRCRDQLMASPFYSDETRFLILPLHSMIPMSDQKKIFTKPPPGARKIVL 440
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
ATNIAE++ITIDD+VYV+D G+ K ++D N++T + W+S A+A+QR+GRAGR
Sbjct: 441 ATNIAESAITIDDVVYVIDSGRMKEKSYDPYTNVSTFQTTWVSKASARQRQGRAGR 496
>gi|302805745|ref|XP_002984623.1| hypothetical protein SELMODRAFT_40134 [Selaginella moellendorffii]
gi|300147605|gb|EFJ14268.1| hypothetical protein SELMODRAFT_40134 [Selaginella moellendorffii]
Length = 908
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 62/116 (53%), Positives = 84/116 (72%), Gaps = 1/116 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
+LVFLPGW+ I + S F+ + +RF I+PLHSM+P QK IF PP G RKIVL
Sbjct: 381 VLVFLPGWEDITRCRDQLMASPFYSDETRFLILPLHSMIPMSDQKKIFTKPPPGARKIVL 440
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
ATNIAE++ITIDD+VYV+D G+ K ++D N++T + W+S A+A+QR+GRAGR
Sbjct: 441 ATNIAESAITIDDVVYVIDSGRMKEKSYDPYTNVSTFQTTWVSKASARQRQGRAGR 496
>gi|195030126|ref|XP_001987919.1| GH10845 [Drosophila grimshawi]
gi|193903919|gb|EDW02786.1| GH10845 [Drosophila grimshawi]
Length = 934
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 118/213 (55%), Gaps = 55/213 (25%)
Query: 96 RSETQQYPNDVLNMLKDPELEGVNN-DVIFSLLQHICTTQRPGAILVYCTYTFMGVSPMK 154
R + Y N VL+ L+ PE EG + D + L+ +IC++Q GA
Sbjct: 369 RRQRGSYDNKVLDQLRLPESEGCEDIDFVADLVYYICSSQSSGA---------------- 412
Query: 155 VFFCKNVLQRLMKGVGANSPKRWVKLLRSMLVVPILVFLPGWDTINSLHRSMC--QSSFF 212
ILVF+PG+D I+ LH ++ +S+
Sbjct: 413 ----------------------------------ILVFMPGYDKISKLHNTLTNPRSALG 438
Query: 213 NSSRFQII--PLHSMLPTVSQKSIFNTPPEGVRKIVLATNIAETSITIDDIVYVVDCGKT 270
R Q+I PLHS+LP+V Q+S+F P+G RK++++T IAETS+TIDD+VYV++ G+T
Sbjct: 439 QRWRDQLIVYPLHSLLPSVEQQSVFRRAPQGKRKVIISTIIAETSVTIDDVVYVINTGRT 498
Query: 271 KMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
K++++D++ NI L+ W++LAN +QR+GRAGR
Sbjct: 499 KVTSYDIETNIQALEECWVTLANTQQRKGRAGR 531
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 307 RSETQQYPNDVLNMLKDPELEGVNN-DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHR 365
R + Y N VL+ L+ PE EG + D + L+ +IC++Q GAILVF+PG+D I+ LH
Sbjct: 369 RRQRGSYDNKVLDQLRLPESEGCEDIDFVADLVYYICSSQSSGAILVFMPGYDKISKLHN 428
Query: 366 SM 367
++
Sbjct: 429 TL 430
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Query: 15 TSWETRQKLLNDPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQI 74
T + + L +P LD +K+ +++S + E R KLP+ +++ V NQ+
Sbjct: 105 TKEQNKDLKLRNPGLDEHLQKQQKERMESGDVRARYEERMKLPTMAYAADIIEAVEQNQV 164
Query: 75 TVISGETGSG-----PPLHLD 90
+I G TG G P L LD
Sbjct: 165 VLIVGSTGCGKTTQVPQLLLD 185
>gi|255073633|ref|XP_002500491.1| predicted protein [Micromonas sp. RCC299]
gi|226515754|gb|ACO61749.1| predicted protein [Micromonas sp. RCC299]
Length = 1024
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 63/116 (54%), Positives = 84/116 (72%), Gaps = 1/116 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFL GWD I ++ M + ++ ++PLH +PT +Q+ IF+ PP GVRKI+L
Sbjct: 428 ILVFLTGWDEITKVNDLMRADPLLGDRTKCAVLPLHGAMPTANQREIFDRPPRGVRKIIL 487
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+TNIAETSITIDD+ +VVDCGK+K +D +N+A L+P WIS A+A QRRGRAGR
Sbjct: 488 STNIAETSITIDDVTHVVDCGKSKEKTYDALNNLACLQPAWISKASAHQRRGRAGR 543
>gi|242023719|ref|XP_002432278.1| ATP-dependent RNA helicase, putative [Pediculus humanus corporis]
gi|212517701|gb|EEB19540.1| ATP-dependent RNA helicase, putative [Pediculus humanus corporis]
Length = 918
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 77/197 (39%), Positives = 105/197 (53%), Gaps = 51/197 (25%)
Query: 97 SETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVYCTYTFMGVSPMKVF 156
++ ++P V N+L++PE E +N I +++ IC T+ GA
Sbjct: 365 EKSNEFPRAVTNILRNPESESLNVQFIAQVIEFICNTEPEGA------------------ 406
Query: 157 FCKNVLQRLMKGVGANSPKRWVKLLRSMLVVPILVFLPGWDTINSLHRSMCQSSFFNSSR 216
ILVF+PG I L++ + S + S R
Sbjct: 407 --------------------------------ILVFVPGLAQIQDLNK-LLNSKTYGSRR 433
Query: 217 FQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFD 276
IIP+HS+LPTV+QK F PP GVRKI+LAT+IAETSITIDD+VYVVDCG+ K FD
Sbjct: 434 NLIIPMHSILPTVNQKQAFQRPPPGVRKIILATSIAETSITIDDVVYVVDCGRLKAKGFD 493
Query: 277 VKDNIATLKPEWISLAN 293
+K N+ TL+PEW +LAN
Sbjct: 494 LKKNVMTLEPEWETLAN 510
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 22 KLLNDPVLDAAFKKEMIRKL-QSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGE 80
K +DP LD +E+ +K S+ +Q+ML+ R++LPS++ R ++D++ NNQ+ VISGE
Sbjct: 133 KFKSDPELDEELYEEINKKKGHSKHFQKMLDFRQRLPSFKKRKELVDLIENNQMIVISGE 192
Query: 81 TGSG 84
TG G
Sbjct: 193 TGCG 196
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 40/65 (61%)
Query: 308 SETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSM 367
++ ++P V N+L++PE E +N I +++ IC T+ GAILVF+PG I L++ +
Sbjct: 365 EKSNEFPRAVTNILRNPESESLNVQFIAQVIEFICNTEPEGAILVFVPGLAQIQDLNKLL 424
Query: 368 CQSSF 372
++
Sbjct: 425 NSKTY 429
>gi|462413239|gb|EMJ18288.1| hypothetical protein PRUPE_ppa000327mg [Prunus persica]
Length = 1282
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 63/116 (54%), Positives = 84/116 (72%), Gaps = 1/116 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFLPGWD I + + +F N+S+ II LHSM+P+ Q +F PP G RKIVL
Sbjct: 556 ILVFLPGWDDIKKTQERLLTNPYFRNTSKVLIISLHSMVPSADQNMVFKRPPPGCRKIVL 615
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+TN+AET+ITIDD+VYV+D G+ K N+D N+++L+ W+S A+AKQRRGRAGR
Sbjct: 616 STNMAETAITIDDVVYVIDSGRMKEKNYDPYKNVSSLQSSWVSKASAKQRRGRAGR 671
Score = 45.1 bits (105), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%)
Query: 327 EGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFF 373
E V+ +I LL+ IC+ + GAILVFLPGWD I + + +F
Sbjct: 533 ENVDFVLIEQLLRKICSDSKDGAILVFLPGWDDIKKTQERLLTNPYF 579
>gi|6692694|gb|AAF24828.1|AC007592_21 F12K11.4 [Arabidopsis thaliana]
Length = 1760
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/116 (53%), Positives = 85/116 (73%), Gaps = 1/116 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFLPGW+ I+ + FF +S++F I+ LHS +P QK +FN PP G RKIVL
Sbjct: 762 ILVFLPGWEEISKTKEKLLDDRFFAHSAKFIILCLHSRVPAEEQKKVFNRPPRGCRKIVL 821
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
ATNIAE+++TIDD+VYV+D G+ K ++D ++++TL+ W+S ANAKQR GRAGR
Sbjct: 822 ATNIAESAVTIDDVVYVIDSGRMKEKSYDPYNDVSTLQSSWVSKANAKQRAGRAGR 877
Score = 45.8 bits (107), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 327 EGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFF 373
E V+ +I L++ IC+ + GAILVFLPGW+ I+ + FF
Sbjct: 739 EEVDVGLIVKLMKKICSDSKDGAILVFLPGWEEISKTKEKLLDDRFF 785
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 7/73 (9%)
Query: 19 TRQKLLNDPV-LDAAFKKEM-IRKLQSRRYQE--MLEARKKLPSYQMRDAVLDMVRNNQ- 73
T+ + N+ V L + KKE R++ S Y + + EAR KLP RDA++ V +NQ
Sbjct: 354 TKHDIENNVVSLSSRLKKERHFREVSSYMYFQKIIFEARSKLPIASFRDAIISAVESNQV 413
Query: 74 --ITVISGETGSG 84
+ +I+GETG G
Sbjct: 414 IWVVLIAGETGCG 426
>gi|5881579|dbj|BAA84364.1| DEIH-box RNA/DNA helicase [Arabidopsis thaliana]
Length = 1538
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/116 (53%), Positives = 85/116 (73%), Gaps = 1/116 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFLPGW+ I+ + FF +S++F I+ LHS +P QK +FN PP G RKIVL
Sbjct: 578 ILVFLPGWEEISKTKEKLLDDRFFAHSAKFIILCLHSRVPAEEQKKVFNRPPRGCRKIVL 637
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
ATNIAE+++TIDD+VYV+D G+ K ++D ++++TL+ W+S ANAKQR GRAGR
Sbjct: 638 ATNIAESAVTIDDVVYVIDSGRMKEKSYDPYNDVSTLQSSWVSKANAKQRAGRAGR 693
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 40/67 (59%), Gaps = 8/67 (11%)
Query: 19 TRQKLLNDPV-LDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVI 77
T+ + N+ V L + KKE R ++E+ EAR KLP RDA++ V +NQ+ +I
Sbjct: 186 TKHDIENNVVSLSSRLKKE-------RHFREIFEARSKLPIASFRDAIISAVESNQVVLI 238
Query: 78 SGETGSG 84
+GETG G
Sbjct: 239 AGETGCG 245
Score = 45.8 bits (107), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 327 EGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFF 373
E V+ +I L++ IC+ + GAILVFLPGW+ I+ + FF
Sbjct: 555 EEVDVGLIVKLMKKICSDSKDGAILVFLPGWEEISKTKEKLLDDRFF 601
>gi|15221547|ref|NP_172152.1| nuclear DEIH-boxhelicase [Arabidopsis thaliana]
gi|332189900|gb|AEE28021.1| nuclear DEIH-boxhelicase [Arabidopsis thaliana]
Length = 1576
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/116 (53%), Positives = 85/116 (73%), Gaps = 1/116 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFLPGW+ I+ + FF +S++F I+ LHS +P QK +FN PP G RKIVL
Sbjct: 578 ILVFLPGWEEISKTKEKLLDDRFFAHSAKFIILCLHSRVPAEEQKKVFNRPPRGCRKIVL 637
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
ATNIAE+++TIDD+VYV+D G+ K ++D ++++TL+ W+S ANAKQR GRAGR
Sbjct: 638 ATNIAESAVTIDDVVYVIDSGRMKEKSYDPYNDVSTLQSSWVSKANAKQRAGRAGR 693
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 40/67 (59%), Gaps = 8/67 (11%)
Query: 19 TRQKLLNDPV-LDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVI 77
T+ + N+ V L + KKE R ++E+ EAR KLP RDA++ V +NQ+ +I
Sbjct: 186 TKHDIENNVVSLSSRLKKE-------RHFREIFEARSKLPIASFRDAIISAVESNQVVLI 238
Query: 78 SGETGSG 84
+GETG G
Sbjct: 239 AGETGCG 245
Score = 45.8 bits (107), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 327 EGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFF 373
E V+ +I L++ IC+ + GAILVFLPGW+ I+ + FF
Sbjct: 555 EEVDVGLIVKLMKKICSDSKDGAILVFLPGWEEISKTKEKLLDDRFF 601
>gi|149064670|gb|EDM14821.1| DEAH (Asp-Glu-Ala-His) box polypeptide 36 (predicted), isoform
CRA_b [Rattus norvegicus]
Length = 500
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/146 (49%), Positives = 96/146 (65%), Gaps = 7/146 (4%)
Query: 212 FNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLATNIAETSITIDDIVYVVDCGKTK 271
F S RF IIPLHS++PTV+Q +F P GVRKIV+ATNIAETSITIDD+VYV+D GK K
Sbjct: 6 FKSDRFLIIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIK 65
Query: 272 MSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRSETQQYPNDVLNMLKDPELEGVNN 331
++FD ++NI+T+ EW+S ANAKQR+GRAGR Y ++L D +L
Sbjct: 66 ETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLP---- 121
Query: 332 DVIFSLLQHIC---TTQRPGAILVFL 354
+++ + L+ +C R G I FL
Sbjct: 122 EILRTPLEELCLQIKILRLGGIAYFL 147
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 376 CLLY---EFAMVDNKPKEIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHPGTTA 432
CLL+ + ++ +K +EII V + + F+ A ++K LR LD+LL K+ P
Sbjct: 401 CLLFFGGDISIQKDKDQEIIAVDEWIVFQSPERIAHLVKGLRKELDILLQEKIECPHPVD 460
Query: 433 WGD 435
W D
Sbjct: 461 WND 463
>gi|297843464|ref|XP_002889613.1| nuclear deih-boxhelicase [Arabidopsis lyrata subsp. lyrata]
gi|297335455|gb|EFH65872.1| nuclear deih-boxhelicase [Arabidopsis lyrata subsp. lyrata]
Length = 1580
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 62/116 (53%), Positives = 83/116 (71%), Gaps = 1/116 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFLPGW+ I + FF +S +F I+ LHS +P QK +FN PP G RKIVL
Sbjct: 579 ILVFLPGWEEIRKTKEKLLDDRFFADSDKFIILCLHSRVPAEEQKKVFNRPPRGCRKIVL 638
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
ATNIAE+++TIDD+VYV+D G+ K ++D ++++TL+ W+S ANAKQR GRAGR
Sbjct: 639 ATNIAESAVTIDDVVYVIDSGRMKEKSYDPYNDVSTLQSSWVSKANAKQRAGRAGR 694
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 33/46 (71%)
Query: 39 RKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
R + +R++E++EAR KLP RDA++ V +NQ+ +I+GETG G
Sbjct: 195 RLEKEKRFREIIEARSKLPIASFRDAIISAVESNQVVLIAGETGCG 240
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 26/47 (55%)
Query: 327 EGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFF 373
E V+ +I L++ IC+ GAILVFLPGW+ I + FF
Sbjct: 556 EEVDVGLIVKLMKKICSDSEAGAILVFLPGWEEIRKTKEKLLDDRFF 602
>gi|391348429|ref|XP_003748450.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 [Metaseiulus
occidentalis]
Length = 935
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 64/116 (55%), Positives = 86/116 (74%), Gaps = 1/116 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVF+PGW+ I+ + R + + N I+PLHSMLPT Q+ +F+ PPEGVRKI+++
Sbjct: 415 ILVFMPGWEGISEVCRKLSECPAINRGNPIILPLHSMLPTEDQRRVFDVPPEGVRKIIVS 474
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDV-KDNIATLKPEWISLANAKQRRGRAGR 303
T I+ETS+TI+D+V+VVD GKTK+ DV KDN+ L +WIS ANA+QR GRAGR
Sbjct: 475 TIISETSVTIEDVVFVVDSGKTKIKTIDVGKDNLNCLSEQWISKANARQRLGRAGR 530
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 4/89 (4%)
Query: 286 PEWISLANAKQRRGRAGRTLKRSETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQ 345
P ++ ++R RA R K Y + L V+ ++ + +QHIC T+
Sbjct: 355 PSYLDKKALRERTERADRLRKYG----YKEPQVFALSKISAAKVDCSLVVACVQHICATK 410
Query: 346 RPGAILVFLPGWDTINSLHRSMCQSSFFN 374
GAILVF+PGW+ I+ + R + + N
Sbjct: 411 GDGAILVFMPGWEGISEVCRKLSECPAIN 439
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 24/33 (72%)
Query: 52 ARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+R KLP ++ R VL + NQ+T+ISGETGSG
Sbjct: 145 SRVKLPVFKARAEVLRTISENQVTIISGETGSG 177
>gi|302781811|ref|XP_002972679.1| hypothetical protein SELMODRAFT_98495 [Selaginella moellendorffii]
gi|300159280|gb|EFJ25900.1| hypothetical protein SELMODRAFT_98495 [Selaginella moellendorffii]
Length = 850
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 78/167 (46%), Positives = 103/167 (61%), Gaps = 5/167 (2%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQII-PLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFL GWD I+ L + + S R +++ PLH +PT++Q+ IF PP GVRKIVL
Sbjct: 359 ILVFLTGWDDISKL---LDKLKLNPSVRNELLLPLHGSMPTINQRQIFQRPPPGVRKIVL 415
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKR 307
ATNIAETSITIDD+VYV+DCGK K +++D + +A L P WIS A A QRRGRAGR
Sbjct: 416 ATNIAETSITIDDVVYVIDCGKAKETSYDALNKLACLLPSWISRAAAHQRRGRAGRVQPG 475
Query: 308 SETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFL 354
YP + + + +L + + SL I + Q G+I FL
Sbjct: 476 ICFHLYPKLMYDAMAQYQLPEILRTPLESLCLQIKSLQ-VGSIAKFL 521
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 28/43 (65%)
Query: 47 QEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHL 89
+ M RKKLP+++M+D +L V NQ+ V+SGETG G L
Sbjct: 107 KSMTSFRKKLPAFKMKDEILQAVSQNQVLVVSGETGCGKTTQL 149
>gi|302812873|ref|XP_002988123.1| hypothetical protein SELMODRAFT_426836 [Selaginella moellendorffii]
gi|300144229|gb|EFJ10915.1| hypothetical protein SELMODRAFT_426836 [Selaginella moellendorffii]
Length = 935
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 78/167 (46%), Positives = 103/167 (61%), Gaps = 5/167 (2%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQII-PLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFL GWD I+ L + + S R +++ PLH +PT++Q+ IF PP GVRKIVL
Sbjct: 426 ILVFLTGWDDISKL---LDKLKLNPSVRNELLLPLHGSMPTINQRQIFQRPPPGVRKIVL 482
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKR 307
ATNIAETSITIDD+VYV+DCGK K +++D + +A L P WIS A A QRRGRAGR
Sbjct: 483 ATNIAETSITIDDVVYVIDCGKAKETSYDALNKLACLLPSWISRAAAHQRRGRAGRVQPG 542
Query: 308 SETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFL 354
YP + + + +L + + SL I + Q G+I FL
Sbjct: 543 ICFHLYPKLMYDAMAQYQLPEILRTPLESLCLQIKSLQ-VGSIAKFL 588
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 28/43 (65%)
Query: 47 QEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHL 89
+ M RKKLP+++M+D VL V NQ+ V+SGETG G L
Sbjct: 143 KSMTSFRKKLPAFKMKDEVLQAVSQNQVLVVSGETGCGKTTQL 185
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 29/41 (70%), Gaps = 2/41 (4%)
Query: 323 DPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSL 363
+PE+ ++ D++ + +QHIC + GAILVFL GWD I+ L
Sbjct: 401 NPEI--IDLDLVEAAIQHICEEKNDGAILVFLTGWDDISKL 439
>gi|148703438|gb|EDL35385.1| DEAH (Asp-Glu-Ala-His) box polypeptide 36, isoform CRA_b [Mus
musculus]
Length = 500
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 71/146 (48%), Positives = 96/146 (65%), Gaps = 7/146 (4%)
Query: 212 FNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLATNIAETSITIDDIVYVVDCGKTK 271
F S +F IIPLHS++PTV+Q +F P GVRKIV+ATNIAETSITIDD+VYV+D GK K
Sbjct: 6 FKSDKFLIIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIK 65
Query: 272 MSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRSETQQYPNDVLNMLKDPELEGVNN 331
++FD ++NI+T+ EW+S ANAKQR+GRAGR Y ++L D +L
Sbjct: 66 ETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLP---- 121
Query: 332 DVIFSLLQHIC---TTQRPGAILVFL 354
+++ + L+ +C R G I FL
Sbjct: 122 EILRTPLEELCLQIKILRLGGIAYFL 147
>gi|303283312|ref|XP_003060947.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226457298|gb|EEH54597.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 1111
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 65/142 (45%), Positives = 91/142 (64%), Gaps = 4/142 (2%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGW I+ L ++ S F ++PLHSM+P QK +F PP GV+K+VLA
Sbjct: 548 ILVFLPGWFEISQLRDNLAADSRFGRDVL-VLPLHSMVPPAEQKKVFQRPPRGVKKVVLA 606
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAET++TIDD+V+V+D G+ K ++D ++TL+ WIS A+A+QRRGRAGR
Sbjct: 607 TNIAETAVTIDDVVFVIDSGRLKEKSYDAHTGVSTLQSAWISRASAQQRRGRAGRVRPGE 666
Query: 309 ETQQYPNDVLNMLKD---PELE 327
+ Y + L D PE++
Sbjct: 667 CYRLYSSARLAAFADFQLPEMQ 688
>gi|167526002|ref|XP_001747335.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774170|gb|EDQ87802.1| predicted protein [Monosiga brevicollis MX1]
Length = 1060
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 60/116 (51%), Positives = 84/116 (72%), Gaps = 1/116 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSS-FFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
IL F+PGW I ++ ++ S N +++++PLHSMLPT Q+ IF+ PP GVRKIV+
Sbjct: 542 ILCFMPGWTDIQKVYETLKSSGPTANRQKYRVLPLHSMLPTAQQQQIFDRPPAGVRKIVI 601
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
ATNIAETSITIDD+VYV+D G K +D +++ LK W+S A+++QR+GRAGR
Sbjct: 602 ATNIAETSITIDDVVYVIDTGLGKEKTYDEVSHLSELKATWVSKASSRQRKGRAGR 657
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 58/112 (51%), Gaps = 26/112 (23%)
Query: 29 LDAAFKKEMIRKLQSRRYQEMLEA-----RKKLPSYQMRDAVLDMVRNNQITVISGETGS 83
+D + +++ +++R +E ++ R+KLP+++ + V+D +R++Q+ +++GETG
Sbjct: 192 VDNLTEASLVQDREAKRAKEQSDSSLAAFRQKLPAWKQQADVIDAIRSHQVVIVTGETGC 251
Query: 84 GPPLHLDFITLKRSETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQR 135
G +T Q P VL+ D EG+N +Q +CT R
Sbjct: 252 G-------------KTTQVPQFVLDDALD-RGEGMN-------VQMVCTQPR 282
Score = 39.7 bits (91), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 27/43 (62%)
Query: 329 VNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSS 371
++ D++ +++ HIC + GAIL F+PGW I ++ ++ S
Sbjct: 521 IDYDLVTAVIWHICRNKPDGAILCFMPGWTDIQKVYETLKSSG 563
>gi|449460086|ref|XP_004147777.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Cucumis
sativus]
Length = 1230
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 63/116 (54%), Positives = 83/116 (71%), Gaps = 1/116 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFLPGWD I+ + + F ++S+F II LHSM+P+ QK +F PP G RKI+L
Sbjct: 547 ILVFLPGWDDISKTRERLSINPLFKDASKFLIISLHSMVPSKEQKKVFRRPPPGCRKIIL 606
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+TNIAET+ITIDD+VYV+D G K ++D N++T + WIS A+AKQR GRAGR
Sbjct: 607 STNIAETAITIDDVVYVIDSGWMKEKSYDPYSNVSTFQSSWISKASAKQREGRAGR 662
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 25/45 (55%)
Query: 329 VNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFF 373
V+ +I LL IC + GAILVFLPGWD I+ + + F
Sbjct: 526 VDVRLIEQLLGKICLDSKEGAILVFLPGWDDISKTRERLSINPLF 570
>gi|449502177|ref|XP_004161565.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DHX36-like [Cucumis sativus]
Length = 1286
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/116 (54%), Positives = 82/116 (70%), Gaps = 1/116 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFLPGWD I+ + + F ++S+F II LHSM+P+ QK +F PP G RKI+L
Sbjct: 547 ILVFLPGWDDISKTRERLSINPLFKDASKFLIISLHSMVPSKEQKKVFRRPPPGCRKIIL 606
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+TNIAET+ITIDD+VYV+D G K +D N++T + WIS A+AKQR GRAGR
Sbjct: 607 STNIAETAITIDDVVYVIDSGWMKEKXYDPYSNVSTFQSSWISKASAKQREGRAGR 662
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 25/45 (55%)
Query: 329 VNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFF 373
V+ +I LL IC + GAILVFLPGWD I+ + + F
Sbjct: 526 VDVRLIEQLLGKICLDSKEGAILVFLPGWDDISKTRERLSINPLF 570
>gi|482574883|gb|EOA39070.1| hypothetical protein CARUB_v10011734mg, partial [Capsella rubella]
Length = 1337
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/131 (48%), Positives = 92/131 (70%), Gaps = 5/131 (3%)
Query: 178 VKLLRSML----VVPILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQK 232
VKL++ + V ILVFLPGW+ I + ++ FF +S++F I+ LHS +P QK
Sbjct: 555 VKLMKKICGDSKVGAILVFLPGWEEIRKTKEKLLENPFFADSAKFSILCLHSRVPADEQK 614
Query: 233 SIFNTPPEGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLA 292
+F+ PP G K+VLATNIAE+++TIDD+VYV+D G+ K ++D ++++TL+ W+S A
Sbjct: 615 KVFDCPPRGCCKVVLATNIAESAVTIDDVVYVIDSGRMKEKSYDPYNDVSTLQSSWVSKA 674
Query: 293 NAKQRRGRAGR 303
NAKQR GRAGR
Sbjct: 675 NAKQRAGRAGR 685
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 30/41 (73%)
Query: 44 RRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+R++++ EAR KLP RDA++ V +NQ+ +I+GETG G
Sbjct: 191 KRFRQIFEARSKLPIASFRDAIISAVESNQVVLIAGETGCG 231
Score = 45.1 bits (105), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%)
Query: 307 RSETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRS 366
+S +QQ + + + + E V+ +I L++ IC + GAILVFLPGW+ I
Sbjct: 527 KSNSQQTQDLLDKYMATMKPEEVDVGLIVKLMKKICGDSKVGAILVFLPGWEEIRKTKEK 586
Query: 367 MCQSSFF 373
+ ++ FF
Sbjct: 587 LLENPFF 593
>gi|390366519|ref|XP_783600.3| PREDICTED: probable ATP-dependent RNA helicase YTHDC2
[Strongylocentrotus purpuratus]
Length = 1436
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/116 (57%), Positives = 84/116 (72%), Gaps = 1/116 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQS-SFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFLPG+D I SL + Q +F + FQI LHS + + QK +F TP G+RKIVL
Sbjct: 655 ILVFLPGYDDIVSLRDMLLQDDTFSDRQSFQIYTLHSSMQSHDQKKVFKTPGAGIRKIVL 714
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+TNIAETS+TI+D+V+VVD GK K +FD NI++LK WIS A+AKQRRGRAGR
Sbjct: 715 STNIAETSVTINDVVFVVDSGKVKEKSFDAIANISSLKSNWISKASAKQRRGRAGR 770
Score = 45.8 bits (107), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 32/48 (66%)
Query: 327 EGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFN 374
E V+ +++ +LL +IC+ + GAILVFLPG+D I SL + Q F+
Sbjct: 632 ERVDLNLVLALLDYICSHSQEGAILVFLPGYDDIVSLRDMLLQDDTFS 679
>gi|31198025|ref|XP_307960.1| AGAP002223-PA [Anopheles gambiae str. PEST]
gi|21291672|gb|EAA03817.1| AGAP002223-PA [Anopheles gambiae str. PEST]
Length = 1289
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 63/119 (52%), Positives = 82/119 (68%), Gaps = 2/119 (1%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN--SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIV 246
IL+FLPG I ++H S+ +S F RF +IPLHSML Q +F PP+G RKIV
Sbjct: 755 ILIFLPGLAEIQTVHESLAESKLFGPRGDRFVLIPLHSMLTNEEQALVFRKPPKGKRKIV 814
Query: 247 LATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTL 305
L+TNIAETS+TIDD V+V+DCG+ K FD N+ +L+ W+S ANA QR+GRAGR +
Sbjct: 815 LSTNIAETSVTIDDCVFVLDCGQMKEKRFDSNRNMESLEMVWVSRANALQRKGRAGRVM 873
Score = 42.7 bits (99), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 55/108 (50%), Gaps = 9/108 (8%)
Query: 7 PKGLTHSVTSWETRQKLLNDPVL--DAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDA 64
P VT +T KL D ++ D ++ + K + Y+EML+ R+ LP++
Sbjct: 401 PTHHQRGVTGRQTGPKLNPDQLMKEDRNIVRKFMDKQTNAAYKEMLKNRRNLPAWTKMSE 460
Query: 65 VLDMVRNNQITVISGETGSG-----PPLHLDFITLKRSETQQYPNDVL 107
++ ++ +QI VISGETG G P LD L+ S+ + PN+ L
Sbjct: 461 IVALMEAHQILVISGETGCGKSTQVPQFLLDDWLLQSSKLK--PNEPL 506
>gi|356498671|ref|XP_003518173.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Glycine
max]
Length = 989
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 71/155 (45%), Positives = 99/155 (63%), Gaps = 5/155 (3%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFL GWD I+ L + ++ + S+F I+PLH +PTV+Q IF PP RKIVL
Sbjct: 498 ILVFLTGWDEISKLLDKLKGNNLVGDPSKFLILPLHGSMPTVNQCEIFERPPPNKRKIVL 557
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKR 307
ATNIAE+SITIDD+VYV+D GK K +++D + +A L P WIS A+A QRRGRAGR
Sbjct: 558 ATNIAESSITIDDVVYVIDWGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPG 617
Query: 308 SETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC 342
+ YP + + + +L +++ + LQ +C
Sbjct: 618 VCYRLYPKLIHDAMPQYQLA----EILRTPLQELC 648
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 37/71 (52%)
Query: 19 TRQKLLNDPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVIS 78
+RQ + L A K+ S +EM R+KLP+++M+ L V+ NQ+ V+S
Sbjct: 184 SRQTDSSKEKLSVALKERQELVQASDSLKEMKSFREKLPAFKMKSEFLKAVQENQVLVVS 243
Query: 79 GETGSGPPLHL 89
GETG G L
Sbjct: 244 GETGCGKTTQL 254
>gi|499015001|ref|XP_004537923.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like
[Ceratitis capitata]
Length = 937
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 60/120 (50%), Positives = 90/120 (75%), Gaps = 6/120 (5%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-----NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVR 243
ILVFLPG+D I+ L+ S+ Q+ S + Q+ PLHSM+PT+ QKS+F P G+R
Sbjct: 418 ILVFLPGYDKISKLN-SILQNPTLPIGQRYSRKIQVYPLHSMMPTMFQKSVFQPSPLGIR 476
Query: 244 KIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
K++L+T +AETS+TIDD+VYV++CG+ K +N++V N+ TL+ W++ AN++QR+GRAGR
Sbjct: 477 KVILSTTVAETSVTIDDVVYVINCGRMKTNNYNVPGNLQTLEETWVTRANSQQRKGRAGR 536
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 307 RSETQQYPNDVLNMLKDPELEGVNN-DVIFSLLQHICTTQRPGAILVFLPGWDTINSLH 364
R +Y + VL L+ + EG N + L+ +IC T+ PGAILVFLPG+D I+ L+
Sbjct: 374 RQIKDKYDSQVLQSLRCTDSEGCENLQFLEHLIFYICDTKPPGAILVFLPGYDKISKLN 432
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Query: 22 KLLNDPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGET 81
+L ++ + +K E++ K + +Q+ E R KLP+ + D +L +++NQ+ +I G T
Sbjct: 101 ELQDNEFQNQRYKSEILSKERDPEFQQRYEQRLKLPTMKQSDRILASIKDNQVVLIVGST 160
Query: 82 GSG-----PPLHLD 90
G G P L LD
Sbjct: 161 GCGKTTQVPQLILD 174
>gi|196000809|ref|XP_002110272.1| hypothetical protein TRIADDRAFT_22905 [Trichoplax adhaerens]
gi|190586223|gb|EDV26276.1| hypothetical protein TRIADDRAFT_22905 [Trichoplax adhaerens]
Length = 981
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 62/116 (53%), Positives = 80/116 (68%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW+ I L+ + S +F+S R+ IIPLHS L TV+Q+ IF P VRKIV+A
Sbjct: 448 ILCFLPGWEDIRKLYERLRLSPYFSSGRYLIIPLHSQLSTVNQRKIFEKPLPSVRKIVIA 507
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT 304
T+IAETSITI+D+ +V+DCGK K +D + L P W S A+A+QR GRAGR
Sbjct: 508 TDIAETSITINDVSFVIDCGKVKEKAYDPTSGLEVLSPVWTSKASAQQRAGRAGRV 563
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 24/93 (25%)
Query: 21 QKLLNDPVLDAAFKKEMIRKLQSRRYQEML------------------------EARKKL 56
Q L DP LD K+E+ K + YQ++L R+KL
Sbjct: 108 QFLQRDPHLDNRLKEELETKFKDPSYQKLLVSNSIFYTATFIFVDTHKFNNSCQAERQKL 167
Query: 57 PSYQMRDAVLDMVRNNQITVISGETGSGPPLHL 89
P Y M D +++++ +NQI VISG+TG G L
Sbjct: 168 PIYAMHDDIMNLIHSNQIVVISGQTGCGKTTQL 200
>gi|432092370|gb|ELK24985.1| Putative ATP-dependent RNA helicase DHX30 [Myotis davidii]
Length = 430
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 61/115 (53%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 81 ILCFLPGWQEIKGVQQRLQEALGLHESKYLILPVHSNIPMMDQKAIFQQPPAGVRKIVLA 140
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 141 TNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 195
>gi|356564424|ref|XP_003550454.1| PREDICTED: ATP-dependent RNA helicase DHX29-like [Glycine max]
Length = 1528
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 71/150 (47%), Positives = 93/150 (62%), Gaps = 11/150 (7%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNS-SRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFLPG IN LH + SS F S +IPLHS + + QK +F PP +RK+V+
Sbjct: 987 ILVFLPGMSEINYLHDKLVASSQFGGPSSEWVIPLHSAVASSEQKRVFLRPPGNIRKVVI 1046
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR---- 303
ATNIAETSITIDD++YV+DCGK K + ++ + ++++ +WIS ANA QRRGRAGR
Sbjct: 1047 ATNIAETSITIDDVIYVIDCGKHKENRYNPQKKLSSMVEDWISRANATQRRGRAGRVKPG 1106
Query: 304 ------TLKRSETQQYPNDVLNMLKDPELE 327
T R E P V ML+ P +E
Sbjct: 1107 ICFSLYTRHRFEKLMRPYQVPEMLRMPLVE 1136
>gi|428174769|gb|EKX43663.1| hypothetical protein GUITHDRAFT_140409 [Guillardia theta CCMP2712]
Length = 1453
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 62/116 (53%), Positives = 79/116 (68%), Gaps = 1/116 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNS-SRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
+LVFLPG I H ++ SS +F IPLHS LP++ Q +F PP GVRK++L
Sbjct: 926 VLVFLPGMGEIQRAHDTLVDSSRLRQVGKFWFIPLHSSLPSLDQLKVFERPPPGVRKVIL 985
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
ATNIAETSITIDD YV+DCG++K FD + ++ L +WIS A A+QRRGRAGR
Sbjct: 986 ATNIAETSITIDDCSYVIDCGRSKQVAFDAETGLSRLLEDWISRAAAQQRRGRAGR 1041
Score = 38.9 bits (89), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 34/51 (66%)
Query: 34 KKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
K++ +K S + ++ + R+ LP+++ R+ +++ + NQ+ +ISGETG G
Sbjct: 646 KEQEEKKKSSPAWCKLQDKRRSLPAWKAREEIIEKLSKNQVLIISGETGCG 696
>gi|113197901|gb|AAI21307.1| dhx30 protein [Xenopus (Silurana) tropicalis]
Length = 635
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 59/115 (51%), Positives = 80/115 (69%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + + + F I+P+HS +P + Q+SIF PP+GVRKIVLA
Sbjct: 111 ILCFLPGWQEIRGVQQRLEEKQQWAKENFLILPVHSNIPMMDQQSIFQRPPQGVRKIVLA 170
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETS+TIDDIV+VVD G K +D++ ++ L+ W+S +N QRRGRAGR
Sbjct: 171 TNIAETSVTIDDIVHVVDSGMQKEQRYDLRTKVSCLETSWVSKSNVTQRRGRAGR 225
>gi|166795915|ref|NP_001107694.1| DEAH (Asp-Glu-Ala-His) box polypeptide 30 [Xenopus (Silurana)
tropicalis]
gi|158253630|gb|AAI54057.1| dhx30 protein [Xenopus (Silurana) tropicalis]
Length = 813
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 59/115 (51%), Positives = 80/115 (69%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + + + F I+P+HS +P + Q+SIF PP+GVRKIVLA
Sbjct: 289 ILCFLPGWQEIRGVQQRLEEKQQWAKENFLILPVHSNIPMMDQQSIFQRPPQGVRKIVLA 348
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETS+TIDDIV+VVD G K +D++ ++ L+ W+S +N QRRGRAGR
Sbjct: 349 TNIAETSVTIDDIVHVVDSGMQKEQRYDLRTKVSCLETSWVSKSNVTQRRGRAGR 403
>gi|502098632|ref|XP_004491281.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like isoform
X1 [Cicer arietinum]
Length = 1216
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/116 (56%), Positives = 89/116 (76%), Gaps = 1/116 (0%)
Query: 189 ILVFLPGWDTIN-SLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFLPGWD IN + + + S F +SS+F ++ LHSM+P++ QK +F PP G RKIVL
Sbjct: 553 ILVFLPGWDDINRAREKLLASSFFKSSSKFMVMSLHSMVPSMEQKKVFKRPPPGCRKIVL 612
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+TNIAET++TIDDIVYV+D G+ K ++D +N++TL+ WIS A+AKQR GRAGR
Sbjct: 613 STNIAETAVTIDDIVYVIDTGRMKEKSYDPYNNVSTLQSSWISKASAKQREGRAGR 668
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 13/72 (18%)
Query: 34 KKEMIRKLQ---SRR-----YQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG- 84
K E+ RKL+ SRR +E+ E R KLP +D + V ++Q+ +ISGETG G
Sbjct: 152 KDEITRKLKTVNSRRQTVPKLKEITELRSKLPIASYKDVITSTVESHQVVLISGETGCGK 211
Query: 85 ----PPLHLDFI 92
P LD++
Sbjct: 212 TTQVPQYILDYM 223
>gi|145343362|ref|XP_001416316.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576541|gb|ABO94609.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 998
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 59/115 (51%), Positives = 83/115 (72%), Gaps = 1/115 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I+ L S+ + + ++PLHSM+ Q+ +F PP+G+RKIVL+
Sbjct: 421 ILVFLPGWDEISKLRDSLT-ADYNVCHSASVLPLHSMVAPADQRKVFQRPPKGLRKIVLS 479
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAET++TIDD+V+V+D G+ K ++D ++TL+ WIS A+AKQRRGRAGR
Sbjct: 480 TNIAETAVTIDDVVFVIDSGRLKEKSYDAYSAVSTLQAAWISQASAKQRRGRAGR 534
>gi|149497585|ref|XP_001517092.1| PREDICTED: putative ATP-dependent RNA helicase DHX30-like, partial
[Ornithorhynchus anatinus]
Length = 1142
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/115 (53%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I S+ + + ++ S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 619 ILCFLPGWQEIKSVQQRLQETLGSQESKYLILPVHSNIPMMDQKAIFQQPPAGVRKIVLA 678
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSIT++DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 679 TNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 733
>gi|462422367|gb|EMJ26630.1| hypothetical protein PRUPE_ppa000446mg [Prunus persica]
Length = 1172
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/155 (43%), Positives = 97/155 (62%), Gaps = 5/155 (3%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVF+ GWD INSL + + +SSR ++ H + + Q+ IF+ P +GVRKIVL
Sbjct: 558 ILVFMTGWDDINSLKEKLHANPLLGDSSRVLLLACHGSMASSEQRLIFDEPEDGVRKIVL 617
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKR 307
ATNIAETSITI+D+V+V+DCGK K +++D +N L P WIS +A+QRRGRAGR
Sbjct: 618 ATNIAETSITINDVVFVLDCGKAKETSYDALNNTPCLLPSWISKVSAQQRRGRAGRVQPG 677
Query: 308 SETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC 342
YP V + + +L +++ + LQ +C
Sbjct: 678 ECYHLYPRCVYDAFAEYQLP----EILRTPLQSLC 708
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 31/45 (68%), Gaps = 2/45 (4%)
Query: 323 DPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSM 367
+P+ G N +I LL +IC ++RPGAILVF+ GWD INSL +
Sbjct: 533 NPDCIGFN--LIEYLLCNICESERPGAILVFMTGWDDINSLKEKL 575
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 45/89 (50%), Gaps = 21/89 (23%)
Query: 47 QEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHLDFITLKRSETQQYPNDV 106
++MLE R+ LP+Y+ +DA+L + NQ+ +ISGETG G +T Q P +
Sbjct: 268 RKMLELRRSLPAYKEKDALLTAISRNQVVIISGETGCG-------------KTTQIPQFI 314
Query: 107 LNMLKDPELEGVNNDVIFSLLQHICTTQR 135
L + E+E V V ICT R
Sbjct: 315 L----ESEIEAVRGAVC----SIICTQPR 335
>gi|301778667|ref|XP_002924751.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like isoform 2
[Ailuropoda melanoleuca]
Length = 995
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/169 (43%), Positives = 99/169 (58%), Gaps = 21/169 (12%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I++LH + F S V+Q +F P GVRKIV+A
Sbjct: 492 ILVFLPGWDNISTLHDLLMSQVMFKS--------------VNQTQVFKRTPPGVRKIVIA 537
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITIDD+VYV+D GK K ++FD ++NI+T+ EW+S ANAKQR+GRAGR
Sbjct: 538 TNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSQANAKQRKGRAGRVQPGH 597
Query: 309 ETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC---TTQRPGAILVFL 354
Y ++L D +L +++ + L+ +C R G I FL
Sbjct: 598 CYHLYNGLRASLLDDYQLP----EILRTPLEELCLQIKILRLGGIAYFL 642
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 39/59 (66%)
Query: 26 DPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
D LD +++ +K RY EM R+KLPSY M+ +++M+ N+Q+TVISGETG G
Sbjct: 178 DVTLDQQLLEDLQKKKSDLRYIEMQHFREKLPSYGMQKELVNMIDNHQVTVISGETGCG 236
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Query: 316 DVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
DVL M+ D E V+ ++I +L++HI + GAILVFLPGWD I++LH + F S
Sbjct: 461 DVLEMMDD---EKVDLNLIAALIRHIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKS 517
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 376 CLLY---EFAMVDNKPKEIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHPGTTA 432
CLL+ + ++ + +E I V + + F+ A ++KELR LD+LL K+ P
Sbjct: 896 CLLFFGGDISIQKDNDQETIAVDEWIVFQSPARIAHLVKELRKELDILLQEKIESPHPVD 955
Query: 433 WGD 435
W D
Sbjct: 956 WKD 958
>gi|308800944|ref|XP_003075253.1| putative DEIH-box RNA/DNA helicase (ISS) [Ostreococcus tauri]
gi|116061807|emb|CAL52525.1| putative DEIH-box RNA/DNA helicase (ISS) [Ostreococcus tauri]
Length = 1240
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/116 (53%), Positives = 85/116 (73%), Gaps = 3/116 (2%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRF-QIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFLPGWD I+ L S+ S+ +N R I+PLHSM+ Q+ +F P +G+RKIVL
Sbjct: 574 ILVFLPGWDEISKLRDSL--SADYNVCRAASILPLHSMVAPAEQRKVFQRPAKGMRKIVL 631
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+TNIAET++TIDD+V+V+D G+ K ++D ++TL+ WIS A+AKQRRGRAGR
Sbjct: 632 STNIAETAVTIDDVVFVIDSGRLKEKSYDAYSAVSTLQAAWISQASAKQRRGRAGR 687
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 26/37 (70%)
Query: 48 EMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
E+ + R LP + RD +L+ VRN+Q+T+++G TG G
Sbjct: 186 ELQKKRAALPVAKFRDDILNAVRNHQVTLVAGSTGCG 222
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Query: 325 ELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNSC 376
+++ ++N +++ + + + GAILVFLPGWD I+ L S+ S+ +N C
Sbjct: 549 DIDLIHNLIVWIVRERTVDEKSEGAILVFLPGWDEISKLRDSL--SADYNVC 598
>gi|502098637|ref|XP_004491282.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like isoform
X2 [Cicer arietinum]
Length = 994
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/116 (56%), Positives = 89/116 (76%), Gaps = 1/116 (0%)
Query: 189 ILVFLPGWDTIN-SLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFLPGWD IN + + + S F +SS+F ++ LHSM+P++ QK +F PP G RKIVL
Sbjct: 331 ILVFLPGWDDINRAREKLLASSFFKSSSKFMVMSLHSMVPSMEQKKVFKRPPPGCRKIVL 390
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+TNIAET++TIDDIVYV+D G+ K ++D +N++TL+ WIS A+AKQR GRAGR
Sbjct: 391 STNIAETAVTIDDIVYVIDTGRMKEKSYDPYNNVSTLQSSWISKASAKQREGRAGR 446
Score = 38.1 bits (87), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 42/96 (43%), Gaps = 14/96 (14%)
Query: 274 NFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRSETQQYPNDVLNMLKDPELEGVNND- 332
N KD L+ + ++ + A +K+ + ++ L + LE N D
Sbjct: 253 NLRAKDGTNALQ------ISERENQPEAAEIIKKHLDGSFDSEEEQKLLNKYLEKANTDH 306
Query: 333 ----VIFSLLQHIC---TTQRPGAILVFLPGWDTIN 361
+I L++ IC + G ILVFLPGWD IN
Sbjct: 307 VDVGLIEKLIRQICIDSKDSKDGGILVFLPGWDDIN 342
>gi|524956027|ref|XP_005077984.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 isoform X2
[Mesocricetus auratus]
Length = 985
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/169 (43%), Positives = 99/169 (58%), Gaps = 21/169 (12%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I++LH + F S V+Q +F P GVRKIV+A
Sbjct: 482 ILVFLPGWDNISTLHDLLMSQVMFKS--------------VNQTQVFKKTPPGVRKIVIA 527
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITIDD+VYV+D GK K ++FD ++NI+T+ EW+S ANAKQR+GRAGR
Sbjct: 528 TNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGH 587
Query: 309 ETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC---TTQRPGAILVFL 354
Y ++L D +L +++ + L+ +C R G I FL
Sbjct: 588 CYHLYNGLRASLLDDYQLP----EILRTPLEELCLQIKILRLGGIAYFL 632
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 38/56 (67%)
Query: 29 LDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
LD +++ +K RY EM RKKLPSY M+ +++++ N+Q+TVISGETG G
Sbjct: 171 LDQQLLEDLQKKKADPRYIEMQHFRKKLPSYGMQKELVNLISNHQVTVISGETGCG 226
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 40/64 (62%)
Query: 312 QYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSS 371
+Y +++L+ + + V+ ++I +L+++I + GAILVFLPGWD I++LH +
Sbjct: 444 RYSASTVDVLERMDDDKVDLNLIAALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQV 503
Query: 372 FFNS 375
F S
Sbjct: 504 MFKS 507
>gi|470130107|ref|XP_004300947.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Fragaria
vesca subsp. vesca]
Length = 1168
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 104/170 (61%), Gaps = 8/170 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVF+ GWD INSL + + + SR ++ H + + Q+ IF+ P +GVRKIVL
Sbjct: 557 ILVFMTGWDDINSLKEKLHANPLLGDPSRVLLLACHGSMASSEQRLIFDEPEDGVRKIVL 616
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKR 307
ATNIAETSITI+D+V+VVDCGK K +++D +N L P WIS +A+QRRGRAGR
Sbjct: 617 ATNIAETSITINDVVFVVDCGKAKETSYDALNNTPCLLPSWISKVSAQQRRGRAGRVQPG 676
Query: 308 SETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC---TTQRPGAILVFL 354
+ YP V + + +L +++ + LQ +C + + G+I FL
Sbjct: 677 ECYRLYPRCVYDAFAEYQLP----EILRTPLQSLCLQIKSLKLGSISEFL 722
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 32/43 (74%)
Query: 42 QSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+SR ++++E R+ LP+Y+ +DA+L + NQ+ +ISGETG G
Sbjct: 262 ESREGRKVMELRRSLPAYKEKDALLTAISRNQVVIISGETGCG 304
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 30/45 (66%), Gaps = 2/45 (4%)
Query: 323 DPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSM 367
+P+ G N +I LL +IC +RPGAILVF+ GWD INSL +
Sbjct: 532 NPDCIGFN--LIEYLLCNICENERPGAILVFMTGWDDINSLKEKL 574
>gi|345789369|ref|XP_003433217.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 isoform 1
[Canis lupus familiaris]
Length = 988
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/169 (43%), Positives = 99/169 (58%), Gaps = 21/169 (12%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I++LH + F S V+Q +F P GVRKIV+A
Sbjct: 485 ILVFLPGWDNISTLHDLLMSQVMFKS--------------VNQTQVFKKTPPGVRKIVIA 530
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITIDD+VYV+D GK K ++FD ++NI+T+ EW+S ANAKQR+GRAGR
Sbjct: 531 TNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGH 590
Query: 309 ETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC---TTQRPGAILVFL 354
Y ++L D +L +++ + L+ +C R G I FL
Sbjct: 591 CYHLYNGLRASLLDDYQLP----EILRTPLEELCLQIKILRLGGIAYFL 635
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 39/59 (66%)
Query: 26 DPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
D LD +++ +K RY EM R+KLPSY M+ +++M+ N+Q+TVISGETG G
Sbjct: 171 DVALDQQLLEDLRKKKSDLRYIEMQHFREKLPSYGMQKELVNMIDNHQVTVISGETGCG 229
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Query: 316 DVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
DV+ M+ D + V+ ++I +L++HI + GAILVFLPGWD I++LH + F S
Sbjct: 454 DVMEMIDD---DKVDLNLIAALIRHIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKS 510
>gi|511868982|ref|XP_004755649.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 isoform X2
[Mustela putorius furo]
gi|511974588|ref|XP_004805259.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 isoform X2
[Mustela putorius furo]
Length = 999
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/169 (43%), Positives = 99/169 (58%), Gaps = 21/169 (12%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I++LH + F S V+Q +F P GVRKIV+A
Sbjct: 496 ILVFLPGWDNISTLHDLLMSQVMFKS--------------VNQTQVFKRTPPGVRKIVIA 541
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITIDD+VYV+D GK K ++FD ++NI+T+ EW+S ANAKQR+GRAGR
Sbjct: 542 TNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGH 601
Query: 309 ETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC---TTQRPGAILVFL 354
Y ++L D +L +++ + L+ +C R G I FL
Sbjct: 602 CYHLYNGLRASLLDDYQLP----EILRTPLEELCLQIKILRLGGIAYFL 646
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 39/59 (66%)
Query: 26 DPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
D LD +++ +K RY EM R+KLPSY M+ +++M+ N+Q+TVISGETG G
Sbjct: 182 DVTLDQQLLEDLQKKKSDLRYIEMQHFREKLPSYGMQKELVNMIDNHQVTVISGETGCG 240
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Query: 316 DVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
DVL M+ D + V+ ++I +L++HI + GAILVFLPGWD I++LH + F S
Sbjct: 465 DVLEMMDD---DKVDLNLIAALIRHIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKS 521
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 376 CLLY---EFAMVDNKPKEIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHPGTTA 432
CLL+ + ++ + +E I V + + F+ A ++KELR LD+LL K+ P
Sbjct: 900 CLLFFGGDISIQKDNDQETIAVDEWIVFQSPARIAHLVKELRKELDILLQEKIESPHPVD 959
Query: 433 WGD 435
W D
Sbjct: 960 WKD 962
>gi|466081512|ref|XP_004284551.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 isoform 2
[Orcinus orca]
Length = 907
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/169 (43%), Positives = 99/169 (58%), Gaps = 21/169 (12%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I++LH + F S V+Q +F P GVRKIV+A
Sbjct: 404 ILVFLPGWDNISTLHDLLMSQVMFKS--------------VNQTQVFKRTPPGVRKIVIA 449
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITIDD+VYV+D GK K ++FD ++NI+T+ EW+S ANAKQR+GRAGR
Sbjct: 450 TNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGH 509
Query: 309 ETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC---TTQRPGAILVFL 354
Y ++L D +L +++ + L+ +C R G I FL
Sbjct: 510 CYHLYNGLRASLLDDYQLP----EILRTPLEELCLQIKILRLGGIAYFL 554
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 39/59 (66%)
Query: 26 DPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
D LD +++ +K RY EM R+KLPSY M+ +++M+ N+Q+TV+SGETG G
Sbjct: 90 DVTLDQQLLEDLQKKKTDLRYIEMQHFREKLPSYGMQKELVNMIDNHQVTVVSGETGCG 148
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Query: 316 DVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
DV+ M+ D + V+ ++I +L+++I + GAILVFLPGWD I++LH + F S
Sbjct: 373 DVIGMMDD---DKVDLNLIAALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKS 429
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 376 CLLY---EFAMVDNKPKEIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHPGTTA 432
CLL+ + ++ + +E I V + + F+ A ++KELR LD+LL K+ P
Sbjct: 808 CLLFFGGDISIQKDNDQETIAVDEWIIFQSPARIAHLVKELRKELDILLQEKIESPHPVD 867
Query: 433 WGD 435
W D
Sbjct: 868 WKD 870
>gi|410971148|ref|XP_003992035.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 isoform 3
[Felis catus]
Length = 998
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/169 (43%), Positives = 99/169 (58%), Gaps = 21/169 (12%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I++LH + F S V+Q +F P GVRKIV+A
Sbjct: 495 ILVFLPGWDNISTLHDLLMSQVMFKS--------------VNQTQVFKRTPPGVRKIVIA 540
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITIDD+VYV+D GK K ++FD ++NI+T+ EW+S ANAKQR+GRAGR
Sbjct: 541 TNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGH 600
Query: 309 ETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC---TTQRPGAILVFL 354
Y ++L D +L +++ + L+ +C R G I FL
Sbjct: 601 CYHLYNGLRASLLDDYQLP----EILRTPLEELCLQIKILRLGGIAYFL 645
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 39/59 (66%)
Query: 26 DPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
D LD +++ +K RY EM R+KLPSY M+ +++M+ N+Q+TVISGETG G
Sbjct: 181 DVTLDQQLLEDLQKKKSDPRYIEMQHFREKLPSYGMQKELVNMIDNHQVTVISGETGCG 239
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Query: 316 DVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
DVL M+ D + V+ ++I +L++HI + GAILVFLPGWD I++LH + F S
Sbjct: 464 DVLEMIDD---DKVDLNLIAALIRHIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKS 520
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 376 CLLY---EFAMVDNKPKEIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHPGTTA 432
CLL+ + ++ + +E I V + + F+ A ++KELR LD+LL K+ P
Sbjct: 899 CLLFFGGDISIQKDNDQETIAVDEWIVFQSPARIAHLVKELRKELDILLQEKIESPHPVD 958
Query: 433 WGD 435
W D
Sbjct: 959 WKD 961
>gi|472371081|ref|XP_004405045.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 isoform 2
[Odobenus rosmarus divergens]
Length = 997
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/169 (43%), Positives = 99/169 (58%), Gaps = 21/169 (12%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I++LH + F S V+Q +F P GVRKIV+A
Sbjct: 494 ILVFLPGWDNISTLHDLLMSQVMFKS--------------VNQTQVFKRTPPGVRKIVIA 539
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITIDD+VYV+D GK K ++FD ++NI+T+ EW+S ANAKQR+GRAGR
Sbjct: 540 TNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGH 599
Query: 309 ETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC---TTQRPGAILVFL 354
Y ++L D +L +++ + L+ +C R G I FL
Sbjct: 600 CYHLYNGLRASLLDDYQLP----EILRTPLEELCLQIKILRLGGIAYFL 644
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 39/59 (66%)
Query: 26 DPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
D LD +++ +K RY EM R+KLPSY M+ +++M+ N+Q+TVISGETG G
Sbjct: 180 DVTLDQQLLEDLQKKKSDLRYIEMQHFREKLPSYGMQKELVNMIDNHQVTVISGETGCG 238
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Query: 316 DVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
DVL M+ D + V+ ++I +L++HI + GAILVFLPGWD I++LH + F S
Sbjct: 463 DVLEMVDD---DKVDLNLIAALIRHIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKS 519
>gi|291400036|ref|XP_002716351.1| PREDICTED: DEAH (Asp-Glu-Ala-His) box polypeptide 36 isoform 2
[Oryctolagus cuniculus]
Length = 990
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/169 (43%), Positives = 99/169 (58%), Gaps = 21/169 (12%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I++LH + F S V+Q +F P GVRKIV+A
Sbjct: 487 ILVFLPGWDNISTLHDLLMSQVMFKS--------------VNQTQVFKKTPPGVRKIVIA 532
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITIDD+VYV+D GK K ++FD ++NI+T+ EW+S ANAKQR+GRAGR
Sbjct: 533 TNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMTAEWVSKANAKQRKGRAGRVQPGH 592
Query: 309 ETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC---TTQRPGAILVFL 354
Y ++L D +L +++ + L+ +C R G I FL
Sbjct: 593 CYHLYNGLRASLLDDYQLP----EILRTPLEELCLQIKILRLGGIAYFL 637
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 40/59 (67%)
Query: 26 DPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
D LD +++ +K RY EM + R+KLPSY M+ +++++ N+Q+TVISGETG G
Sbjct: 173 DVTLDQQLLEDLQKKKTDLRYIEMQQFREKLPSYGMQKELVNLIDNHQVTVISGETGCG 231
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Query: 316 DVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
DVL M+ D + V+ ++I +L+++I + GAILVFLPGWD I++LH + F S
Sbjct: 456 DVLEMMDD---DKVDLNLIAALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKS 512
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 376 CLLY---EFAMVDNKPKEIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHPGTTA 432
CLL+ + ++ + +E I V + + F+ A ++KELR LD+LL K+ P
Sbjct: 891 CLLFFGGDISIQKDNDQETIAVDEWIVFQSPARIAHLVKELRKELDILLQEKIESPQPVD 950
Query: 433 WGD 435
W D
Sbjct: 951 WKD 953
>gi|167830436|ref|NP_001107869.1| probable ATP-dependent RNA helicase DHX36 isoform 2 [Homo sapiens]
gi|119599168|gb|EAW78762.1| DEAH (Asp-Glu-Ala-His) box polypeptide 36, isoform CRA_b [Homo
sapiens]
Length = 994
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/169 (43%), Positives = 99/169 (58%), Gaps = 21/169 (12%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I++LH + F S V+Q +F P GVRKIV+A
Sbjct: 491 ILVFLPGWDNISTLHDLLMSQVMFKS--------------VNQTQVFKRTPPGVRKIVIA 536
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITIDD+VYV+D GK K ++FD ++NI+T+ EW+S ANAKQR+GRAGR
Sbjct: 537 TNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGH 596
Query: 309 ETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC---TTQRPGAILVFL 354
Y ++L D +L +++ + L+ +C R G I FL
Sbjct: 597 CYHLYNGLRASLLDDYQLP----EILRTPLEELCLQIKILRLGGIAYFL 641
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 39/59 (66%)
Query: 26 DPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
D LD +++ +K RY EM R+KLPSY M+ +++++ N+Q+TVISGETG G
Sbjct: 177 DGTLDQKLLEDLQKKKNDLRYIEMQHFREKLPSYGMQKELVNLIDNHQVTVISGETGCG 235
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Query: 316 DVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
DV+ M++D + V+ ++I +L+++I + GAILVFLPGWD I++LH + F S
Sbjct: 460 DVIEMMED---DKVDLNLIVALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKS 516
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 376 CLLY---EFAMVDNKPKEIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHPGTTA 432
CLL+ + ++ + +E I V + + F+ A ++KELR LD+LL K+ P
Sbjct: 895 CLLFFGGDISIQKDNDQETIAVDEWIVFQSPARIAHLVKELRKELDILLQEKIESPHPVD 954
Query: 433 WGD 435
W D
Sbjct: 955 WND 957
>gi|114589920|ref|XP_001147378.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 isoform 3 [Pan
troglodytes]
Length = 994
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/169 (43%), Positives = 99/169 (58%), Gaps = 21/169 (12%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I++LH + F S V+Q +F P GVRKIV+A
Sbjct: 491 ILVFLPGWDNISTLHDLLMSQVMFKS--------------VNQTQVFKRTPPGVRKIVIA 536
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITIDD+VYV+D GK K ++FD ++NI+T+ EW+S ANAKQR+GRAGR
Sbjct: 537 TNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGH 596
Query: 309 ETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC---TTQRPGAILVFL 354
Y ++L D +L +++ + L+ +C R G I FL
Sbjct: 597 CYHLYNGLRASLLDDYQLP----EILRTPLEELCLQIKILRLGGIAYFL 641
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 39/59 (66%)
Query: 26 DPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
D LD +++ +K RY EM R+KLPSY M+ +++++ N+Q+TVISGETG G
Sbjct: 177 DGTLDQKLLEDLQKKKNDLRYIEMQHFREKLPSYGMQKELVNLIDNHQVTVISGETGCG 235
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Query: 316 DVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
DV+ M++D + V+ ++I +L+++I + GAILVFLPGWD I++LH + F S
Sbjct: 460 DVIEMMED---DKVDLNLIVALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKS 516
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 376 CLLY---EFAMVDNKPKEIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHPGTTA 432
CLL+ + ++ + +E I V + + F+ A ++KELR LD+LL K+ P
Sbjct: 895 CLLFFGGDISIQKDNDQETIAVDEWIVFQSPARIAHLVKELRKELDILLQEKIESPHPVD 954
Query: 433 WGD 435
W D
Sbjct: 955 WND 957
>gi|512944978|ref|XP_004835003.1| PREDICTED: putative ATP-dependent RNA helicase DHX30 isoform X2
[Heterocephalus glaber]
Length = 1220
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 697 ILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPAGVRKIVLA 756
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSIT++DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 757 TNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 811
>gi|403265719|ref|XP_003925064.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 isoform 2
[Saimiri boliviensis boliviensis]
Length = 997
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/169 (43%), Positives = 99/169 (58%), Gaps = 21/169 (12%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I++LH + F S V+Q +F P GVRKIV+A
Sbjct: 494 ILVFLPGWDNISTLHDLLMSQVMFKS--------------VNQTQVFKRTPPGVRKIVIA 539
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITIDD+VYV+D GK K ++FD ++NI+T+ EW+S ANAKQR+GRAGR
Sbjct: 540 TNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSQANAKQRKGRAGRVQPGH 599
Query: 309 ETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC---TTQRPGAILVFL 354
Y ++L D +L +++ + L+ +C R G I FL
Sbjct: 600 CYHLYNGLRASLLDDYQLP----EILRTPLEELCLQIKILRLGGIAYFL 644
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 39/59 (66%)
Query: 26 DPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
D LD +++ +K RY EM R+KLPSY M+ +++++ N+Q+TVISGETG G
Sbjct: 180 DGTLDQQLLEDLQKKKNDLRYIEMQHFREKLPSYGMQKELVNLIDNHQVTVISGETGCG 238
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Query: 316 DVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
DV+ M+ D + V+ ++I +L+++I + GAILVFLPGWD I++LH + F S
Sbjct: 463 DVIEMMDD---DKVDLNLIVALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKS 519
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 376 CLLY---EFAMVDNKPKEIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHPGTTA 432
CLL+ + ++ + +E I V + + F+ A ++KELR LD+LL K+ P
Sbjct: 898 CLLFFGGDISIQKDNDQETIAVDEWIIFQSPARIAHLVKELRKELDILLQEKIESPHPVD 957
Query: 433 WGD 435
W D
Sbjct: 958 WND 960
>gi|40644065|emb|CAE11803.1| putative DExH/D RNA helicase [Homo sapiens]
Length = 994
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/169 (43%), Positives = 99/169 (58%), Gaps = 21/169 (12%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I++LH + F S V+Q +F P GVRKIV+A
Sbjct: 491 ILVFLPGWDNISTLHDLLMSQVMFKS--------------VNQTQVFKRTPPGVRKIVIA 536
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITIDD+VYV+D GK K ++FD ++NI+T+ EW+S ANAKQR+GRAGR
Sbjct: 537 TNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGH 596
Query: 309 ETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC---TTQRPGAILVFL 354
Y ++L D +L +++ + L+ +C R G I FL
Sbjct: 597 CYHLYNGLRASLLDDYQLP----EILRTPLEELCLQIKILRLGGIAYFL 641
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 39/59 (66%)
Query: 26 DPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
D LD +++ +K RY EM R+KLPSY M+ +++++ N+Q+TVISGETG G
Sbjct: 177 DGTLDQKLLEDLQKKKNDLRYIEMQHFREKLPSYGMQKELVNLIDNHQVTVISGETGCG 235
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Query: 316 DVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
DV+ M++D + V+ ++I +L+++I + GAILVFLPGWD I++LH + F S
Sbjct: 460 DVIEMMED---DKVDLNLIVALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKS 516
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 376 CLLY---EFAMVDNKPKEIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHPGTTA 432
CLL+ + ++ + +E I V + + F+ A ++KELR LD+LL K+ P
Sbjct: 895 CLLFFGGDISIQKDNDQETIAVDEWIVFQSPARIAHLVKELRKELDILLQEKIESPHPVD 954
Query: 433 WGD 435
W D
Sbjct: 955 WND 957
>gi|488515543|ref|XP_004449775.1| PREDICTED: putative ATP-dependent RNA helicase DHX30 isoform 4
[Dasypus novemcinctus]
Length = 1181
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/115 (53%), Positives = 83/115 (72%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 658 ILCFLPGWQEIKGVQQRLQEALCMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLA 717
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+DIV+VVD G K ++D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 718 TNIAETSITINDIVHVVDSGLHKEEHYDLKTKVSCLETVWVSRANVIQRRGRAGR 772
>gi|402861180|ref|XP_003894982.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 isoform 2
[Papio anubis]
Length = 994
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/169 (43%), Positives = 99/169 (58%), Gaps = 21/169 (12%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I++LH + F S V+Q +F P GVRKIV+A
Sbjct: 491 ILVFLPGWDNISTLHDLLMSQVMFKS--------------VNQTQVFKRTPPGVRKIVIA 536
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITIDD+VYV+D GK K ++FD ++NI+T+ EW+S ANAKQR+GRAGR
Sbjct: 537 TNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGH 596
Query: 309 ETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC---TTQRPGAILVFL 354
Y ++L D +L +++ + L+ +C R G I FL
Sbjct: 597 CYHLYNGLRASLLDDYQLP----EILRTPLEELCLQIKILRLGGIAYFL 641
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 38/59 (64%)
Query: 26 DPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
D LD +++ +K RY EM R+KLPSY M+ +++++ +Q+TVISGETG G
Sbjct: 177 DGTLDQKLLEDLQKKKNDLRYIEMQHFREKLPSYGMQKELVNLIDKHQVTVISGETGCG 235
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Query: 316 DVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
DV+ M+ D + V+ ++I +L+++I + GAILVFLPGWD I++LH + F S
Sbjct: 460 DVIEMMDD---DKVDLNLIVALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKS 516
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 376 CLLY---EFAMVDNKPKEIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHPGTTA 432
CLL+ + ++ + +E I V + + F+ A ++KELR LD+LL K+ P
Sbjct: 895 CLLFFGGDISIQKDNDQETIAVDEWIVFQSPARIAHLVKELRKELDILLQEKIESPHPVD 954
Query: 433 WGD 435
W D
Sbjct: 955 WND 957
>gi|488515541|ref|XP_004449774.1| PREDICTED: putative ATP-dependent RNA helicase DHX30 isoform 3
[Dasypus novemcinctus]
Length = 1188
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/115 (53%), Positives = 83/115 (72%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 665 ILCFLPGWQEIKGVQQRLQEALCMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLA 724
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+DIV+VVD G K ++D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 725 TNIAETSITINDIVHVVDSGLHKEEHYDLKTKVSCLETVWVSRANVIQRRGRAGR 779
>gi|488515539|ref|XP_004449773.1| PREDICTED: putative ATP-dependent RNA helicase DHX30 isoform 2
[Dasypus novemcinctus]
Length = 1194
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/115 (53%), Positives = 83/115 (72%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 671 ILCFLPGWQEIKGVQQRLQEALCMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLA 730
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+DIV+VVD G K ++D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 731 TNIAETSITINDIVHVVDSGLHKEEHYDLKTKVSCLETVWVSRANVIQRRGRAGR 785
>gi|488515537|ref|XP_004449772.1| PREDICTED: putative ATP-dependent RNA helicase DHX30 isoform 1
[Dasypus novemcinctus]
Length = 1220
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/115 (53%), Positives = 83/115 (72%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 697 ILCFLPGWQEIKGVQQRLQEALCMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLA 756
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+DIV+VVD G K ++D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 757 TNIAETSITINDIVHVVDSGLHKEEHYDLKTKVSCLETVWVSRANVIQRRGRAGR 811
>gi|397495260|ref|XP_003818477.1| PREDICTED: putative ATP-dependent RNA helicase DHX30 [Pan paniscus]
Length = 1035
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/115 (53%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 512 ILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLA 571
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 572 TNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 626
>gi|296227767|ref|XP_002759519.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 isoform 1
[Callithrix jacchus]
Length = 996
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/169 (43%), Positives = 99/169 (58%), Gaps = 21/169 (12%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I++LH + F S V+Q +F P GVRKIV+A
Sbjct: 493 ILVFLPGWDNISTLHDLLMSQVMFKS--------------VNQTQVFKRTPPGVRKIVIA 538
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITIDD+VYV+D GK K ++FD ++NI+T+ EW+S ANAKQR+GRAGR
Sbjct: 539 TNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSQANAKQRKGRAGRVQPGH 598
Query: 309 ETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC---TTQRPGAILVFL 354
Y ++L D +L +++ + L+ +C R G I FL
Sbjct: 599 CYHLYNGLRASLLDDYQLP----EILRTPLEELCLQIKILRLGGIAYFL 643
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 39/59 (66%)
Query: 26 DPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
D LD +++ +K RY EM R+KLPSY M+ +++++ N+Q+TVISGETG G
Sbjct: 179 DGTLDQQLLEDLQKKKNDLRYIEMQHFREKLPSYGMQKELVNLIDNHQVTVISGETGCG 237
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Query: 316 DVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
DV+ M+ D + V+ ++I +L+++I + GAILVFLPGWD I++LH + F S
Sbjct: 462 DVIEMMDD---DKVDLNLIVALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKS 518
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 376 CLLY---EFAMVDNKPKEIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHPGTTA 432
CLL+ + ++ + +E I V + + F+ A ++KELR LD+LL K+ +P
Sbjct: 897 CLLFFGGDISIQKDNDQETIAVDEWIIFQSPARIAHLVKELRKELDILLQEKIENPHPVD 956
Query: 433 WGD 435
W D
Sbjct: 957 WND 959
>gi|471388064|ref|XP_004379235.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 isoform 2
[Trichechus manatus latirostris]
Length = 991
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/116 (55%), Positives = 79/116 (68%), Gaps = 14/116 (12%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I+SLH + F S V+Q +F P GVRKIV+A
Sbjct: 488 ILVFLPGWDNISSLHDLLMSQVMFQS--------------VNQTQVFKKTPPGVRKIVIA 533
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT 304
TNIAETSITIDD+VYV+D GK K ++FD ++NI+T+ EW+S ANAKQR+GRAGR
Sbjct: 534 TNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRV 589
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 39/59 (66%)
Query: 26 DPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
D LD +++ RK RY EM R+KLPSY M+ +++++ N+Q+TVISGETG G
Sbjct: 174 DVTLDQQLLEDLQRKKTDPRYIEMQHFREKLPSYGMQKELVNLIANHQVTVISGETGCG 232
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 4/73 (5%)
Query: 303 RTLKRSETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINS 362
R L+R + + N VL M+ D + V+ ++I +L+++I + GAILVFLPGWD I+S
Sbjct: 445 RELRRRYSARTVN-VLQMMDD---DKVDLNLIAALIRYIVLEEEDGAILVFLPGWDNISS 500
Query: 363 LHRSMCQSSFFNS 375
LH + F S
Sbjct: 501 LHDLLMSQVMFQS 513
>gi|109048664|ref|XP_001106252.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like isoform 1
[Macaca mulatta]
Length = 994
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/169 (43%), Positives = 99/169 (58%), Gaps = 21/169 (12%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I++LH + F S V+Q +F P GVRKIV+A
Sbjct: 491 ILVFLPGWDNISTLHDLLMSQVMFKS--------------VNQTQVFKRTPPGVRKIVIA 536
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITIDD+VYV+D GK K ++FD ++NI+T+ EW+S ANAKQR+GRAGR
Sbjct: 537 TNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGH 596
Query: 309 ETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC---TTQRPGAILVFL 354
Y ++L D +L +++ + L+ +C R G I FL
Sbjct: 597 CYHLYNGLRASLLDDYQLP----EILRTPLEELCLQIKILRLGGIAYFL 641
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 38/59 (64%)
Query: 26 DPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
D LD +++ +K RY EM R+KLPSY M+ +++++ +Q+TVISGETG G
Sbjct: 177 DGTLDQKLLEDLQKKKNDLRYIEMQHFREKLPSYGMQKELVNLIDKHQVTVISGETGCG 235
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Query: 316 DVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
DV+ M+ D + V+ ++I +L+++I + GAILVFLPGWD I++LH + F S
Sbjct: 460 DVIEMMDD---DKVDLNLIVALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKS 516
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 376 CLLY---EFAMVDNKPKEIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHPGTTA 432
CLL+ + ++ + +E I V + + F+ A ++KELR LD+LL K+ P
Sbjct: 895 CLLFFGGDISIQKDNDQETIAVDEWIVFQSPARIAHLVKELRKELDILLQEKIESPHPVD 954
Query: 433 WGD 435
W D
Sbjct: 955 WND 957
>gi|384247114|gb|EIE20602.1| P-loop containing nucleoside triphosphate hydrolase protein
[Coccomyxa subellipsoidea C-169]
Length = 1212
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 59/116 (50%), Positives = 83/116 (71%), Gaps = 1/116 (0%)
Query: 189 ILVFLPGWDTINSLHRSM-CQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
+L+FLPGWD I L + + S + S++ ++PLHSM+P Q+ +F P GVRKIVL
Sbjct: 550 VLIFLPGWDEIIRLKEQLEGRQSALSGSKYMVLPLHSMVPAAEQRKVFKRAPVGVRKIVL 609
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
ATNIAET++TIDDIV V++ G+ K ++D N++TL+ WIS A+ +QRRGRAGR
Sbjct: 610 ATNIAETAVTIDDIVCVINSGRHKEKSYDPYTNVSTLQATWISKASERQRRGRAGR 665
>gi|512944986|ref|XP_004835007.1| PREDICTED: putative ATP-dependent RNA helicase DHX30 isoform X6
[Heterocephalus glaber]
Length = 1187
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 634 ILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPAGVRKIVLA 693
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSIT++DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 694 TNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 748
>gi|351709646|gb|EHB12565.1| Putative ATP-dependent RNA helicase DHX30, partial [Heterocephalus
glaber]
Length = 1150
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 630 ILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPAGVRKIVLA 689
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSIT++DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 690 TNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 744
>gi|327287304|ref|XP_003228369.1| PREDICTED: putative ATP-dependent RNA helicase DHX30-like [Anolis
carolinensis]
Length = 1239
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/133 (47%), Positives = 88/133 (66%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + +S ++SR+ ++P+HS +P + Q+SIF PP GVRKIVLA
Sbjct: 722 ILCFLPGWQEIKGVQQRLLESLGSHNSRYLVLPVHSNIPMMDQQSIFPRPPPGVRKIVLA 781
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITI+DIV+VVD G K +D+K ++ L+ W+S +N QRRGRAGR
Sbjct: 782 TNIAETSITINDIVHVVDSGTHKEERYDLKTKVSCLETVWVSKSNVIQRRGRAGRCQSGF 841
Query: 309 ETQQYPNDVLNML 321
+P L+ +
Sbjct: 842 AYHLFPRSRLDRM 854
>gi|512944980|ref|XP_004835004.1| PREDICTED: putative ATP-dependent RNA helicase DHX30 isoform X3
[Heterocephalus glaber]
gi|512944982|ref|XP_004835005.1| PREDICTED: putative ATP-dependent RNA helicase DHX30 isoform X4
[Heterocephalus glaber]
gi|512944984|ref|XP_004835006.1| PREDICTED: putative ATP-dependent RNA helicase DHX30 isoform X5
[Heterocephalus glaber]
Length = 1194
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 671 ILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPAGVRKIVLA 730
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSIT++DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 731 TNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 785
>gi|512902828|ref|XP_004899820.1| PREDICTED: putative ATP-dependent RNA helicase DHX30 isoform X1
[Heterocephalus glaber]
gi|512902832|ref|XP_004899821.1| PREDICTED: putative ATP-dependent RNA helicase DHX30 isoform X2
[Heterocephalus glaber]
Length = 1194
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 671 ILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPAGVRKIVLA 730
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSIT++DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 731 TNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 785
>gi|470130757|ref|XP_004301269.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Fragaria
vesca subsp. vesca]
Length = 1216
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/170 (40%), Positives = 102/170 (60%), Gaps = 8/170 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNS-SRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
+L+F+ GWD INSL + +R ++ H +P+ Q+ IF+ P +GVRKIVL
Sbjct: 592 VLIFMTGWDDINSLKDQLQSHPLLGDPNRVLLLACHGSMPSAEQRLIFDKPEDGVRKIVL 651
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKR 307
ATN+AETSITI+D+V+V+DCGK K +++D +N L P WIS A ++QRRGRAGR
Sbjct: 652 ATNMAETSITINDVVFVIDCGKAKETSYDALNNTPCLLPSWISKAASRQRRGRAGRVQPG 711
Query: 308 SETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC---TTQRPGAILVFL 354
YP V + D +L +++ + LQ +C + + G+I FL
Sbjct: 712 ECYHLYPRCVYDAFADYQLP----ELLRTPLQSLCLQIKSLQLGSIAEFL 757
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 29/43 (67%)
Query: 47 QEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHL 89
Q+MLE R+ LP+Y+ +D +L V NQ+ V+SGETG G L
Sbjct: 300 QKMLELRRSLPAYKEKDFLLKAVSENQVIVVSGETGCGKTTQL 342
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 28/41 (68%), Gaps = 2/41 (4%)
Query: 323 DPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSL 363
+P+ G N +I +L HI +RPGA+L+F+ GWD INSL
Sbjct: 567 NPDSIGFN--LIEHVLCHIVRKERPGAVLIFMTGWDDINSL 605
>gi|441611780|ref|XP_003257352.2| PREDICTED: LOW QUALITY PROTEIN: putative ATP-dependent RNA helicase
DHX30 [Nomascus leucogenys]
Length = 1220
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/115 (53%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 743 ILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLA 802
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 803 TNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 857
>gi|74221870|dbj|BAE28661.1| unnamed protein product [Mus musculus]
Length = 546
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 23 ILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPLGVRKIVLA 82
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSIT++DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 83 TNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 137
>gi|466078451|ref|XP_004283931.1| PREDICTED: putative ATP-dependent RNA helicase DHX30 isoform 3
[Orcinus orca]
Length = 1155
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/115 (53%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 632 ILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLA 691
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 692 TNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 746
>gi|355559678|gb|EHH16406.1| hypothetical protein EGK_11684 [Macaca mulatta]
Length = 1194
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/115 (53%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 671 ILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLA 730
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 731 TNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 785
>gi|20336290|ref|NP_055781.2| putative ATP-dependent RNA helicase DHX30 isoform 2 [Homo sapiens]
gi|31455196|gb|AAH15029.1| DEAH (Asp-Glu-Ala-His) box polypeptide 30 [Homo sapiens]
gi|54611158|gb|AAH38417.1| DEAH (Asp-Glu-Ala-His) box polypeptide 30 [Homo sapiens]
Length = 1155
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/115 (53%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 632 ILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLA 691
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 692 TNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 746
>gi|470609474|ref|XP_004315087.1| PREDICTED: putative ATP-dependent RNA helicase DHX30 isoform 3
[Tursiops truncatus]
Length = 1155
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/115 (53%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 632 ILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLA 691
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 692 TNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 746
>gi|426340365|ref|XP_004034100.1| PREDICTED: putative ATP-dependent RNA helicase DHX30 isoform 2
[Gorilla gorilla gorilla]
Length = 1155
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/115 (53%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 632 ILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLA 691
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 692 TNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 746
>gi|123995187|gb|ABM85195.1| DEAH (Asp-Glu-Ala-His) box polypeptide 30 [synthetic construct]
Length = 1194
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/115 (53%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 671 ILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLA 730
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 731 TNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 785
>gi|55727636|emb|CAH90573.1| hypothetical protein [Pongo abelii]
Length = 1166
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/115 (53%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 643 ILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLA 702
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 703 TNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 757
>gi|119585237|gb|EAW64833.1| DEAH (Asp-Glu-Ala-His) box polypeptide 30, isoform CRA_a [Homo
sapiens]
Length = 1265
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/115 (53%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 742 ILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLA 801
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 802 TNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 856
>gi|504138064|ref|XP_004581487.1| PREDICTED: putative ATP-dependent RNA helicase DHX30 isoform X3
[Ochotona princeps]
Length = 1155
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 632 ILCFLPGWQEIRGVQQRLQEALGLHESKYLILPVHSNIPMMDQKAIFQQPPPGVRKIVLA 691
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSIT++DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 692 TNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 746
>gi|224111576|ref|XP_002315906.1| predicted protein [Populus trichocarpa]
gi|222864946|gb|EEF02077.1| predicted protein [Populus trichocarpa]
Length = 1053
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/170 (42%), Positives = 101/170 (59%), Gaps = 8/170 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNS-SRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
+LVF+ GWD I+SL + F SR ++ H + + Q+ IF+ P EGVRKI L
Sbjct: 441 VLVFMTGWDDISSLKDKLQAHPFLGDPSRVLLLTCHGSMASSEQRLIFDEPEEGVRKIAL 500
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKR 307
ATNIAETSITI+DIV+V+DCGK K S++D +N L P WIS +A+QRRGRAGR
Sbjct: 501 ATNIAETSITINDIVFVLDCGKAKESSYDALNNTPCLLPSWISKVSAQQRRGRAGRVQPG 560
Query: 308 SETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC---TTQRPGAILVFL 354
YP V + + +L +++ + LQ IC + + G+I FL
Sbjct: 561 ECYHLYPRCVYDAFAEYQLP----EILRTPLQSICLQIKSLKLGSISDFL 606
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 48 EMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHLDFITLKRSETQQYPNDVL 107
+MLE RK LP+Y+ +DA+L + NQI +ISG TG G + L+ SE + V
Sbjct: 152 KMLEFRKTLPAYKEKDAILAAISQNQIVIISGATGCGKTTQIPQFILE-SEVESVRGAVC 210
Query: 108 NML 110
N++
Sbjct: 211 NII 213
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 38/71 (53%)
Query: 304 TLKRSETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSL 363
L+ ++ ++Y + L + + +++ LL +IC +RPGA+LVF+ GWD I+SL
Sbjct: 395 ALRTADFKEYSSQTRESLSCWNPDSIGFNLVEYLLCNICENERPGAVLVFMTGWDDISSL 454
Query: 364 HRSMCQSSFFN 374
+ F
Sbjct: 455 KDKLQAHPFLG 465
>gi|335299024|ref|XP_003358469.1| PREDICTED: putative ATP-dependent RNA helicase DHX30-like isoform 2
[Sus scrofa]
Length = 1155
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/115 (53%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 632 ILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLA 691
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 692 TNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 746
>gi|512944976|ref|XP_004835002.1| PREDICTED: putative ATP-dependent RNA helicase DHX30 isoform X1
[Heterocephalus glaber]
Length = 1224
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 671 ILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPAGVRKIVLA 730
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSIT++DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 731 TNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 785
>gi|426340363|ref|XP_004034099.1| PREDICTED: putative ATP-dependent RNA helicase DHX30 isoform 1
[Gorilla gorilla gorilla]
Length = 1194
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/115 (53%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 671 ILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLA 730
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 731 TNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 785
>gi|20336294|ref|NP_619520.1| putative ATP-dependent RNA helicase DHX30 isoform 1 [Homo sapiens]
gi|74758997|sp|Q7L2E3.1|DHX30_HUMAN RecName: Full=Putative ATP-dependent RNA helicase DHX30; AltName:
Full=DEAH box protein 30
gi|18043040|gb|AAH20126.1| DEAH (Asp-Glu-Ala-His) box polypeptide 30 [Homo sapiens]
gi|119585238|gb|EAW64834.1| DEAH (Asp-Glu-Ala-His) box polypeptide 30, isoform CRA_b [Homo
sapiens]
gi|119585239|gb|EAW64835.1| DEAH (Asp-Glu-Ala-His) box polypeptide 30, isoform CRA_b [Homo
sapiens]
gi|168278743|dbj|BAG11251.1| ATP-dependent RNA helicase DHX30 [synthetic construct]
Length = 1194
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/115 (53%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 671 ILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLA 730
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 731 TNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 785
>gi|206725470|ref|NP_001125306.1| putative ATP-dependent RNA helicase DHX30 [Pongo abelii]
Length = 1194
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/115 (53%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 671 ILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLA 730
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 731 TNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 785
>gi|470609468|ref|XP_004315085.1| PREDICTED: putative ATP-dependent RNA helicase DHX30 isoform 1
[Tursiops truncatus]
Length = 1220
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/115 (53%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 697 ILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLA 756
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 757 TNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 811
>gi|168048900|ref|XP_001776903.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671759|gb|EDQ58306.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1152
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/157 (45%), Positives = 98/157 (62%), Gaps = 7/157 (4%)
Query: 177 WVKLLRSMLVVPILVFLPGWDTINSLHRSMCQSSFFNSSRFQ-IIPLHSMLPTVSQKSIF 235
W+ + + IL FLPGWDTI + + + +SRF I+PLHS LP Q++ F
Sbjct: 588 WISQVFAQGDGAILCFLPGWDTITIVRDRLLK---VRASRFMMIVPLHSQLPAGEQRAAF 644
Query: 236 NTPPEGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAK 295
P G+RK+VLATNIAETS+TIDD+VYVVD GK K +DV N+ T++ +W S A+A+
Sbjct: 645 ARAPFGMRKVVLATNIAETSVTIDDVVYVVDSGKIKEKQYDVSRNLTTMRVQWTSQASAR 704
Query: 296 QRRGRAGRTLKRSETQQYPNDV-LNMLKD--PELEGV 329
QR+GRAGR Q + LNML+ PE++ V
Sbjct: 705 QRQGRAGRVQPGFCFQLFTQTTFLNMLEHQIPEMQRV 741
>gi|504138062|ref|XP_004581486.1| PREDICTED: putative ATP-dependent RNA helicase DHX30 isoform X2
[Ochotona princeps]
Length = 1194
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 671 ILCFLPGWQEIRGVQQRLQEALGLHESKYLILPVHSNIPMMDQKAIFQQPPPGVRKIVLA 730
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSIT++DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 731 TNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 785
>gi|390475006|ref|XP_003734883.1| PREDICTED: putative ATP-dependent RNA helicase DHX30 isoform 1
[Callithrix jacchus]
Length = 1194
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/115 (53%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 671 ILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLA 730
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 731 TNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 785
>gi|332816780|ref|XP_001155300.2| PREDICTED: putative ATP-dependent RNA helicase DHX30 isoform 5 [Pan
troglodytes]
Length = 1265
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/115 (53%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 742 ILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLA 801
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 802 TNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 856
>gi|504138060|ref|XP_004581485.1| PREDICTED: putative ATP-dependent RNA helicase DHX30 isoform X1
[Ochotona princeps]
Length = 1222
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 699 ILCFLPGWQEIRGVQQRLQEALGLHESKYLILPVHSNIPMMDQKAIFQQPPPGVRKIVLA 758
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSIT++DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 759 TNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 813
>gi|426218093|ref|XP_004003284.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 isoform 2
[Ovis aries]
Length = 996
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/169 (43%), Positives = 100/169 (59%), Gaps = 21/169 (12%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I++LH + F S V+Q +F P GVRKIV+A
Sbjct: 493 ILVFLPGWDNISTLHDLLMSQVMFKS--------------VNQTQVFKRTPPGVRKIVIA 538
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITIDD+VYV+D GK K ++FD ++NI+T+ EW+S ANAKQR+GRAGR
Sbjct: 539 TNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGH 598
Query: 309 ETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC---TTQRPGAILVFL 354
Y + ++L D +L +++ + L+ +C R G I FL
Sbjct: 599 CYHLYNSLRASLLDDYQLP----EILRTPLEELCLQIKILRLGGIAHFL 643
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 40/59 (67%)
Query: 26 DPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
D +LD +++ +K RY EM R+KLPSY M+ +++M+ N+Q+TVISGETG G
Sbjct: 179 DAILDQQLLEDLQKKKTDLRYIEMQRFREKLPSYGMQKELVNMIDNHQVTVISGETGCG 237
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 42/69 (60%)
Query: 307 RSETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRS 366
R Q+Y +++++ + E V+ ++I +L+++I + GAILVFLPGWD I++LH
Sbjct: 450 RELRQRYSASTVDVIEVMDDEKVDLNLIAALIRYIVLEEEDGAILVFLPGWDNISTLHDL 509
Query: 367 MCQSSFFNS 375
+ F S
Sbjct: 510 LMSQVMFKS 518
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 376 CLLY---EFAMVDNKPKEIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHPGTTA 432
CLL+ + ++ + +E I V + + F+ A ++KELR LD+LL K+ P
Sbjct: 897 CLLFFGGDISIQKDNDQETIAVDEWIIFQSPARIAHLVKELRKELDILLQEKIESPHPVD 956
Query: 433 WGD 435
W D
Sbjct: 957 WKD 959
>gi|390475008|ref|XP_003734884.1| PREDICTED: putative ATP-dependent RNA helicase DHX30 isoform 2
[Callithrix jacchus]
Length = 1155
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/115 (53%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 632 ILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLA 691
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 692 TNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 746
>gi|311268826|ref|XP_003132222.1| PREDICTED: putative ATP-dependent RNA helicase DHX30-like isoform 1
[Sus scrofa]
Length = 1194
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/115 (53%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 671 ILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLA 730
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 731 TNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 785
>gi|471355869|ref|XP_004368537.1| PREDICTED: putative ATP-dependent RNA helicase DHX30 isoform 1
[Trichechus manatus latirostris]
Length = 1224
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/115 (53%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 701 ILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPLGVRKIVLA 760
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 761 TNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 815
>gi|40788976|dbj|BAA74913.2| KIAA0890 protein [Homo sapiens]
Length = 1210
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/115 (53%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 687 ILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLA 746
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 747 TNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 801
>gi|470609471|ref|XP_004315086.1| PREDICTED: putative ATP-dependent RNA helicase DHX30 isoform 2
[Tursiops truncatus]
Length = 1194
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/115 (53%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 671 ILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLA 730
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 731 TNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 785
>gi|466078446|ref|XP_004283930.1| PREDICTED: putative ATP-dependent RNA helicase DHX30 isoform 2
[Orcinus orca]
Length = 1194
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/115 (53%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 671 ILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLA 730
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 731 TNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 785
>gi|297285865|ref|XP_001113231.2| PREDICTED: putative ATP-dependent RNA helicase DHX30-like isoform 4
[Macaca mulatta]
Length = 1265
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/115 (53%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 742 ILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLA 801
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 802 TNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 856
>gi|471355873|ref|XP_004368539.1| PREDICTED: putative ATP-dependent RNA helicase DHX30 isoform 3
[Trichechus manatus latirostris]
Length = 1155
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/115 (53%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 632 ILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPLGVRKIVLA 691
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 692 TNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 746
>gi|195148556|ref|XP_002015239.1| GL19591 [Drosophila persimilis]
gi|194107192|gb|EDW29235.1| GL19591 [Drosophila persimilis]
Length = 946
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 60/121 (49%), Positives = 88/121 (72%), Gaps = 5/121 (4%)
Query: 189 ILVFLPGWDTINSLHRSM--CQSSFFNSSRFQ---IIPLHSMLPTVSQKSIFNTPPEGVR 243
ILVFLPG+D I+ L++++ Q SF Q + PLHS++P+V Q+++F PP G R
Sbjct: 431 ILVFLPGFDKISKLNKALENPQGSFKGQRWRQSLVLYPLHSLMPSVEQQAVFRRPPAGKR 490
Query: 244 KIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
K++++T IAETS+TIDD+VYV++ G+TK SN+D+ NI +L W+S AN +QR+GRAGR
Sbjct: 491 KVIMSTVIAETSVTIDDVVYVINSGRTKASNYDIASNIQSLDEVWVSKANTQQRKGRAGR 550
Query: 304 T 304
Sbjct: 551 V 551
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 40/63 (63%), Gaps = 3/63 (4%)
Query: 313 YPNDVLNMLKDPELEGVNN-DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSM--CQ 369
Y VL+ L+ PE EG + D I L+ +IC + GAILVFLPG+D I+ L++++ Q
Sbjct: 393 YDRRVLDQLRLPESEGCEDIDFIADLVYYICENEPEGAILVFLPGFDKISKLNKALENPQ 452
Query: 370 SSF 372
SF
Sbjct: 453 GSF 455
Score = 42.4 bits (98), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 5/72 (6%)
Query: 29 LDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG---- 84
LD +E +LQS +E L AR++LP+ + + ++ V+ NQ+ +I G TG G
Sbjct: 130 LDTKLMEEHRERLQSPNMRERLHARQQLPAMKHAEEIIRAVQQNQVILIVGSTGCGKTTQ 189
Query: 85 -PPLHLDFITLK 95
P L LD +K
Sbjct: 190 VPQLLLDHSIVK 201
>gi|291393602|ref|XP_002713384.1| PREDICTED: DEAH (Asp-Glu-Ala-His) box polypeptide 30 [Oryctolagus
cuniculus]
Length = 1264
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 741 ILCFLPGWQEIRGVQQRLQEALGLHESKYLILPVHSNIPMMDQKAIFQQPPAGVRKIVLA 800
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSIT++DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 801 TNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 855
>gi|507556516|ref|XP_004662013.1| PREDICTED: putative ATP-dependent RNA helicase DHX30 [Jaculus
jaculus]
Length = 1019
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/115 (53%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 496 ILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPLGVRKIVLA 555
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 556 TNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 610
>gi|466078441|ref|XP_004283929.1| PREDICTED: putative ATP-dependent RNA helicase DHX30 isoform 1
[Orcinus orca]
Length = 1220
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/115 (53%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 697 ILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLA 756
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 757 TNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 811
>gi|471355871|ref|XP_004368538.1| PREDICTED: putative ATP-dependent RNA helicase DHX30 isoform 2
[Trichechus manatus latirostris]
Length = 1194
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/115 (53%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 671 ILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPLGVRKIVLA 730
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 731 TNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 785
>gi|402860250|ref|XP_003894546.1| PREDICTED: putative ATP-dependent RNA helicase DHX30 [Papio anubis]
Length = 1291
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/115 (53%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 768 ILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLA 827
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 828 TNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 882
>gi|344236044|gb|EGV92147.1| Putative ATP-dependent RNA helicase DHX30 [Cricetulus griseus]
Length = 1194
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/115 (53%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 671 ILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPLGVRKIVLA 730
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 731 TNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 785
>gi|507579155|ref|XP_004673088.1| PREDICTED: putative ATP-dependent RNA helicase DHX30-like [Jaculus
jaculus]
Length = 1156
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/115 (53%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 633 ILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPLGVRKIVLA 692
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 693 TNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 747
>gi|119585240|gb|EAW64836.1| DEAH (Asp-Glu-Ala-His) box polypeptide 30, isoform CRA_c [Homo
sapiens]
Length = 1142
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/115 (53%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 671 ILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLA 730
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 731 TNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 785
>gi|13278588|gb|AAH04082.1| Dhx30 protein, partial [Mus musculus]
Length = 921
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 398 ILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPLGVRKIVLA 457
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSIT++DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 458 TNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 512
>gi|440891709|gb|ELR45257.1| Putative ATP-dependent RNA helicase DHX30 [Bos grunniens mutus]
Length = 1223
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/115 (53%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 698 ILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPIGVRKIVLA 757
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 758 TNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 812
>gi|512915440|ref|XP_004928390.1| PREDICTED: putative ATP-dependent RNA helicase DHX57-like [Bombyx
mori]
Length = 1260
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 62/119 (52%), Positives = 82/119 (68%), Gaps = 2/119 (1%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN--SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIV 246
IL+FLPG I SL+ + S F+ + ++ ++PLHS L + Q +F P EGVRKIV
Sbjct: 729 ILIFLPGIQEIMSLYDQLVDSHTFSPKTGKYMLVPLHSTLSSEEQAQVFKKPREGVRKIV 788
Query: 247 LATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTL 305
L+TNIAETS+TIDD V+VVDCG+ K FD N+ +L W+S ANAKQR+GRAGR +
Sbjct: 789 LSTNIAETSVTIDDCVFVVDCGRMKEKRFDSNRNMESLDLVWVSRANAKQRKGRAGRVM 847
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
Query: 1 MKSPHSPKGLTHSVTSWETRQKLLNDPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQ 60
+K H KG+ + + +++L + + K + K ++ RY +M+ R+KLP++Q
Sbjct: 378 VKPSHYKKGVIKDIRNNINFEEVLRE---NKEIAKRWLEKRENNRYNKMMSDRRKLPAWQ 434
Query: 61 MRDAVLDMVRNNQITVISGETGSG 84
++ +L+ ++ +QI VISGETG G
Sbjct: 435 KKNDILNALKKSQIVVISGETGCG 458
>gi|354484235|ref|XP_003504295.1| PREDICTED: putative ATP-dependent RNA helicase DHX30 [Cricetulus
griseus]
Length = 1222
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/115 (53%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 699 ILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPLGVRKIVLA 758
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 759 TNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 813
>gi|296474858|tpg|DAA16973.1| TPA: putative ATP-dependent RNA helicase DHX30 [Bos taurus]
Length = 1220
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/115 (53%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 697 ILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPIGVRKIVLA 756
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 757 TNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 811
>gi|115495851|ref|NP_001070003.1| putative ATP-dependent RNA helicase DHX30 [Bos taurus]
gi|110278939|sp|Q2NKY8.1|DHX30_BOVIN RecName: Full=Putative ATP-dependent RNA helicase DHX30; AltName:
Full=DEAH box protein 30
gi|84708859|gb|AAI11350.1| DEAH (Asp-Glu-Ala-His) box polypeptide 30 [Bos taurus]
Length = 1220
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/115 (53%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 697 ILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPIGVRKIVLA 756
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 757 TNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 811
>gi|507686334|ref|XP_004640752.1| PREDICTED: putative ATP-dependent RNA helicase DHX30 isoform X1
[Octodon degus]
Length = 1217
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 694 ILCFLPGWQEIKGVQQRLQEALGIHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLA 753
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSIT++DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 754 TNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 808
>gi|125986189|ref|XP_001356858.1| GA21700 [Drosophila pseudoobscura pseudoobscura]
gi|54645184|gb|EAL33924.1| GA21700 [Drosophila pseudoobscura pseudoobscura]
Length = 946
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 60/121 (49%), Positives = 88/121 (72%), Gaps = 5/121 (4%)
Query: 189 ILVFLPGWDTINSLHRSM--CQSSFFNSSRFQ---IIPLHSMLPTVSQKSIFNTPPEGVR 243
ILVFLPG+D I+ L++++ Q SF Q + PLHS++P+V Q+++F PP G R
Sbjct: 431 ILVFLPGFDKISKLNKALENPQGSFKGQRWRQSLVLYPLHSLMPSVEQQAVFRRPPAGKR 490
Query: 244 KIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
K++++T IAETS+TIDD+VYV++ G+TK SN+D+ NI +L W+S AN +QR+GRAGR
Sbjct: 491 KVIMSTIIAETSVTIDDVVYVINSGRTKASNYDIASNIQSLDEVWVSKANTQQRKGRAGR 550
Query: 304 T 304
Sbjct: 551 V 551
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 40/63 (63%), Gaps = 3/63 (4%)
Query: 313 YPNDVLNMLKDPELEGVNN-DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSM--CQ 369
Y VL+ L+ PE EG + D I L+ +IC + GAILVFLPG+D I+ L++++ Q
Sbjct: 393 YDRRVLDQLRLPESEGCEDIDFIADLVYYICENEPEGAILVFLPGFDKISKLNKALENPQ 452
Query: 370 SSF 372
SF
Sbjct: 453 GSF 455
Score = 42.4 bits (98), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 5/72 (6%)
Query: 29 LDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG---- 84
LD +E +LQS +E L AR++LP+ + + ++ V+ NQ+ +I G TG G
Sbjct: 130 LDTKLMEEHRERLQSPNMRERLHARQQLPAMKHAEEIIRAVQQNQVILIVGSTGCGKTTQ 189
Query: 85 -PPLHLDFITLK 95
P L LD +K
Sbjct: 190 VPQLLLDHSIVK 201
>gi|514474692|ref|XP_005006907.1| PREDICTED: putative ATP-dependent RNA helicase DHX30 isoform X2
[Cavia porcellus]
Length = 1218
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 695 ILCFLPGWQEIKGVQQRLQEALGIHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLA 754
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSIT++DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 755 TNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 809
>gi|507930055|ref|XP_004676275.1| PREDICTED: putative ATP-dependent RNA helicase DHX30 isoform X1
[Condylura cristata]
Length = 1222
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 699 ILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLA 758
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSIT++DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 759 TNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 813
>gi|472359243|ref|XP_004399239.1| PREDICTED: putative ATP-dependent RNA helicase DHX30 isoform 3
[Odobenus rosmarus divergens]
Length = 1155
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 632 ILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLA 691
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSIT++DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 692 TNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 746
>gi|514474694|ref|XP_003476954.2| PREDICTED: putative ATP-dependent RNA helicase DHX30 isoform X1
[Cavia porcellus]
gi|514474696|ref|XP_005006908.1| PREDICTED: putative ATP-dependent RNA helicase DHX30 isoform X3
[Cavia porcellus]
Length = 1195
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 672 ILCFLPGWQEIKGVQQRLQEALGIHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLA 731
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSIT++DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 732 TNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 786
>gi|410951025|ref|XP_003982202.1| PREDICTED: putative ATP-dependent RNA helicase DHX30 isoform 2
[Felis catus]
Length = 1155
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 632 ILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLA 691
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSIT++DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 692 TNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 746
>gi|355746719|gb|EHH51333.1| hypothetical protein EGM_10688 [Macaca fascicularis]
Length = 1194
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/115 (53%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 671 ILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLA 730
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 731 TNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSGANVIQRRGRAGR 785
>gi|149728695|ref|XP_001499666.1| PREDICTED: putative ATP-dependent RNA helicase DHX30 isoform 2
[Equus caballus]
Length = 1155
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 632 ILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLA 691
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSIT++DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 692 TNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 746
>gi|73985696|ref|XP_863765.1| PREDICTED: putative ATP-dependent RNA helicase DHX30 isoform 5
[Canis lupus familiaris]
Length = 1155
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 632 ILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLA 691
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSIT++DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 692 TNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 746
>gi|507686336|ref|XP_004640753.1| PREDICTED: putative ATP-dependent RNA helicase DHX30 isoform X2
[Octodon degus]
Length = 1194
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 671 ILCFLPGWQEIKGVQQRLQEALGIHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLA 730
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSIT++DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 731 TNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 785
>gi|512005045|ref|XP_004819981.1| PREDICTED: putative ATP-dependent RNA helicase DHX30 isoform X2
[Mustela putorius furo]
Length = 1222
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 699 ILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLA 758
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSIT++DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 759 TNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 813
>gi|478490644|ref|XP_004419695.1| PREDICTED: putative ATP-dependent RNA helicase DHX30 isoform 3
[Ceratotherium simum simum]
Length = 1155
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 632 ILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLA 691
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSIT++DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 692 TNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 746
>gi|511881853|ref|XP_004760814.1| PREDICTED: putative ATP-dependent RNA helicase DHX30 isoform X9
[Mustela putorius furo]
gi|512005057|ref|XP_004819987.1| PREDICTED: putative ATP-dependent RNA helicase DHX30 isoform X8
[Mustela putorius furo]
Length = 1166
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 643 ILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLA 702
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSIT++DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 703 TNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 757
>gi|507930059|ref|XP_004676277.1| PREDICTED: putative ATP-dependent RNA helicase DHX30 isoform X3
[Condylura cristata]
Length = 1155
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 632 ILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLA 691
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSIT++DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 692 TNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 746
>gi|472359239|ref|XP_004399237.1| PREDICTED: putative ATP-dependent RNA helicase DHX30 isoform 1
[Odobenus rosmarus divergens]
Length = 1222
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 699 ILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLA 758
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSIT++DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 759 TNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 813
>gi|511881845|ref|XP_004760810.1| PREDICTED: putative ATP-dependent RNA helicase DHX30 isoform X5
[Mustela putorius furo]
Length = 1222
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 699 ILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLA 758
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSIT++DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 759 TNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 813
>gi|478490642|ref|XP_004419694.1| PREDICTED: putative ATP-dependent RNA helicase DHX30 isoform 2
[Ceratotherium simum simum]
Length = 1194
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 671 ILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLA 730
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSIT++DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 731 TNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 785
>gi|478490640|ref|XP_004419693.1| PREDICTED: putative ATP-dependent RNA helicase DHX30 isoform 1
[Ceratotherium simum simum]
Length = 1222
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 699 ILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLA 758
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSIT++DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 759 TNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 813
>gi|472359241|ref|XP_004399238.1| PREDICTED: putative ATP-dependent RNA helicase DHX30 isoform 2
[Odobenus rosmarus divergens]
Length = 1194
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 671 ILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLA 730
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSIT++DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 731 TNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 785
>gi|511881837|ref|XP_004760806.1| PREDICTED: putative ATP-dependent RNA helicase DHX30 isoform X1
[Mustela putorius furo]
gi|512005043|ref|XP_004819980.1| PREDICTED: putative ATP-dependent RNA helicase DHX30 isoform X1
[Mustela putorius furo]
Length = 1252
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 729 ILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLA 788
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSIT++DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 789 TNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 843
>gi|73985688|ref|XP_533844.2| PREDICTED: putative ATP-dependent RNA helicase DHX30 isoform 1
[Canis lupus familiaris]
Length = 1194
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 671 ILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLA 730
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSIT++DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 731 TNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 785
>gi|505843687|ref|XP_004615340.1| PREDICTED: putative ATP-dependent RNA helicase DHX30 isoform X2
[Sorex araneus]
Length = 1155
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 632 ILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPMGVRKIVLA 691
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSIT++DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 692 TNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 746
>gi|410951027|ref|XP_003982203.1| PREDICTED: putative ATP-dependent RNA helicase DHX30 isoform 3
[Felis catus]
Length = 1222
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 699 ILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLA 758
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSIT++DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 759 TNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 813
>gi|281343609|gb|EFB19193.1| hypothetical protein PANDA_000638 [Ailuropoda melanoleuca]
Length = 1189
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 666 ILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLA 725
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSIT++DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 726 TNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 780
>gi|505843685|ref|XP_004615339.1| PREDICTED: putative ATP-dependent RNA helicase DHX30 isoform X1
[Sorex araneus]
Length = 1194
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 671 ILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPMGVRKIVLA 730
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSIT++DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 731 TNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 785
>gi|344275866|ref|XP_003409732.1| PREDICTED: putative ATP-dependent RNA helicase DHX30-like
[Loxodonta africana]
Length = 1194
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 61/115 (53%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 671 ILCFLPGWQEIKGVQQRLQEALGVHESKYLILPVHSNIPMMDQKAIFQQPPLGVRKIVLA 730
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 731 TNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 785
>gi|507930057|ref|XP_004676276.1| PREDICTED: putative ATP-dependent RNA helicase DHX30 isoform X2
[Condylura cristata]
Length = 1194
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 671 ILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLA 730
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSIT++DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 731 TNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 785
>gi|502126632|ref|XP_004499379.1| PREDICTED: ATP-dependent RNA helicase DHX29-like isoform X2 [Cicer
arietinum]
Length = 1309
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 70/150 (46%), Positives = 93/150 (62%), Gaps = 11/150 (7%)
Query: 189 ILVFLPGWDTINSLHRSMCQS-SFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFLPG IN LH + S F S +IPLHS + + QK +F PP +RK+V+
Sbjct: 719 ILVFLPGVIEINHLHDKLVASYQFGGPSSDWVIPLHSSVASTEQKKVFLHPPRNIRKVVI 778
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR---- 303
ATNIAETSITIDD++YV+DCGK K + F+ + ++++ +WIS ANA+QR+GRAGR
Sbjct: 779 ATNIAETSITIDDVIYVIDCGKHKENRFNPQKKLSSMVEDWISQANARQRQGRAGRVKPG 838
Query: 304 ------TLKRSETQQYPNDVLNMLKDPELE 327
T R E P V ML+ P +E
Sbjct: 839 ICFRLYTRYRFEKLMRPYQVPEMLRMPLVE 868
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 30/45 (66%)
Query: 40 KLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
K+ S++YQ++L R LP ++D + M++ N + V+ GETGSG
Sbjct: 400 KMGSQKYQDILNFRTTLPISTLKDDITQMLKENDVLVVCGETGSG 444
>gi|301754093|ref|XP_002912819.1| PREDICTED: putative ATP-dependent RNA helicase DHX30-like
[Ailuropoda melanoleuca]
Length = 1194
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 671 ILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLA 730
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSIT++DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 731 TNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 785
>gi|511881849|ref|XP_004760812.1| PREDICTED: putative ATP-dependent RNA helicase DHX30 isoform X7
[Mustela putorius furo]
gi|511881851|ref|XP_004760813.1| PREDICTED: putative ATP-dependent RNA helicase DHX30 isoform X8
[Mustela putorius furo]
gi|512005053|ref|XP_004819985.1| PREDICTED: putative ATP-dependent RNA helicase DHX30 isoform X6
[Mustela putorius furo]
gi|512005055|ref|XP_004819986.1| PREDICTED: putative ATP-dependent RNA helicase DHX30 isoform X7
[Mustela putorius furo]
Length = 1194
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 671 ILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLA 730
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSIT++DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 731 TNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 785
>gi|149728692|ref|XP_001499652.1| PREDICTED: putative ATP-dependent RNA helicase DHX30 isoform 1
[Equus caballus]
Length = 1194
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 671 ILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLA 730
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSIT++DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 731 TNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 785
>gi|148677080|gb|EDL09027.1| DEAH (Asp-Glu-Ala-His) box polypeptide 30 [Mus musculus]
Length = 1223
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 700 ILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPLGVRKIVLA 759
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSIT++DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 760 TNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 814
>gi|511881847|ref|XP_004760811.1| PREDICTED: putative ATP-dependent RNA helicase DHX30 isoform X6
[Mustela putorius furo]
gi|512005047|ref|XP_004819982.1| PREDICTED: putative ATP-dependent RNA helicase DHX30 isoform X3
[Mustela putorius furo]
gi|512005049|ref|XP_004819983.1| PREDICTED: putative ATP-dependent RNA helicase DHX30 isoform X4
[Mustela putorius furo]
gi|512005051|ref|XP_004819984.1| PREDICTED: putative ATP-dependent RNA helicase DHX30 isoform X5
[Mustela putorius furo]
Length = 1221
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 698 ILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLA 757
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSIT++DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 758 TNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 812
>gi|511881839|ref|XP_004760807.1| PREDICTED: putative ATP-dependent RNA helicase DHX30 isoform X2
[Mustela putorius furo]
gi|511881841|ref|XP_004760808.1| PREDICTED: putative ATP-dependent RNA helicase DHX30 isoform X3
[Mustela putorius furo]
gi|511881843|ref|XP_004760809.1| PREDICTED: putative ATP-dependent RNA helicase DHX30 isoform X4
[Mustela putorius furo]
Length = 1248
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 725 ILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLA 784
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSIT++DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 785 TNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 839
>gi|410951023|ref|XP_003982201.1| PREDICTED: putative ATP-dependent RNA helicase DHX30 isoform 1
[Felis catus]
Length = 1194
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 671 ILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLA 730
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSIT++DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 731 TNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 785
>gi|149018455|gb|EDL77096.1| DEAH (Asp-Glu-Ala-His) box polypeptide 30, isoform CRA_b [Rattus
norvegicus]
Length = 1222
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 699 ILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPLGVRKIVLA 758
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSIT++DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 759 TNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 813
>gi|61557430|ref|NP_001013267.1| putative ATP-dependent RNA helicase DHX30 [Rattus norvegicus]
gi|81909465|sp|Q5BJS0.1|DHX30_RAT RecName: Full=Putative ATP-dependent RNA helicase DHX30; AltName:
Full=DEAH box protein 30
gi|60551861|gb|AAH91359.1| DEAH (Asp-Glu-Ala-His) box polypeptide 30 [Rattus norvegicus]
Length = 1194
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 671 ILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPLGVRKIVLA 730
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSIT++DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 731 TNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 785
>gi|358248329|ref|NP_001239612.1| putative ATP-dependent RNA helicase DHX30 isoform 3 [Mus musculus]
gi|16740643|gb|AAH16202.1| Dhx30 protein [Mus musculus]
Length = 1223
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 700 ILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPLGVRKIVLA 759
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSIT++DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 760 TNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 814
>gi|507947046|ref|XP_004682389.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 isoform X3
[Condylura cristata]
Length = 994
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 74/169 (43%), Positives = 99/169 (58%), Gaps = 21/169 (12%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I++LH + F S V+Q +F P GVRKIV+A
Sbjct: 491 ILVFLPGWDNISTLHDLLMSQVMFKS--------------VNQTQVFKRTPPGVRKIVIA 536
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITIDD+VYV+D GK K ++FD ++NI+T+ EW+S ANAKQR+GRAGR
Sbjct: 537 TNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSNANAKQRKGRAGRVQPGH 596
Query: 309 ETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC---TTQRPGAILVFL 354
Y ++L D +L +++ + L+ +C R G I FL
Sbjct: 597 CYHLYNGLRASLLDDYQLP----EILRTPLEELCLQIKILRLGGIADFL 641
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 39/59 (66%)
Query: 26 DPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
D LD +++ +K RY EM R+KLPSY M+ +++M+ N+Q+TVISGETG G
Sbjct: 177 DVTLDQQLLEDLQKKKTDLRYIEMQHFREKLPSYGMQKELVNMIDNHQVTVISGETGCG 235
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Query: 316 DVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
D++ M+ D + V+ ++I +L++HI + GAILVFLPGWD I++LH + F S
Sbjct: 460 DIIEMMDD---DKVDLNLIAALIRHIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKS 516
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 376 CLLY---EFAMVDNKPKEIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHPGTTA 432
CLL+ + ++ + +E I V + + F+ A ++KELR LD+LL K+ P
Sbjct: 895 CLLFFGGDISIQKDNDQETIAVDEWIIFQSPARIAHLVKELRKELDILLQEKIESPHPVD 954
Query: 433 WGD 435
W D
Sbjct: 955 WKD 957
>gi|403268852|ref|XP_003926478.1| PREDICTED: putative ATP-dependent RNA helicase DHX30 [Saimiri
boliviensis boliviensis]
Length = 1273
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 61/115 (53%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 750 ILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLA 809
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 810 TNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 864
>gi|431905133|gb|ELK10188.1| Putative ATP-dependent RNA helicase DHX30 [Pteropus alecto]
Length = 1219
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 696 ILCFLPGWQEIKGVQQRLQEALGVHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLA 755
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSIT++DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 756 TNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 810
>gi|502126630|ref|XP_004499378.1| PREDICTED: ATP-dependent RNA helicase DHX29-like isoform X1 [Cicer
arietinum]
Length = 1442
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 70/150 (46%), Positives = 93/150 (62%), Gaps = 11/150 (7%)
Query: 189 ILVFLPGWDTINSLHRSMCQS-SFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFLPG IN LH + S F S +IPLHS + + QK +F PP +RK+V+
Sbjct: 901 ILVFLPGVIEINHLHDKLVASYQFGGPSSDWVIPLHSSVASTEQKKVFLHPPRNIRKVVI 960
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR---- 303
ATNIAETSITIDD++YV+DCGK K + F+ + ++++ +WIS ANA+QR+GRAGR
Sbjct: 961 ATNIAETSITIDDVIYVIDCGKHKENRFNPQKKLSSMVEDWISQANARQRQGRAGRVKPG 1020
Query: 304 ------TLKRSETQQYPNDVLNMLKDPELE 327
T R E P V ML+ P +E
Sbjct: 1021 ICFRLYTRYRFEKLMRPYQVPEMLRMPLVE 1050
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 30/45 (66%)
Query: 40 KLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
K+ S++YQ++L R LP ++D + M++ N + V+ GETGSG
Sbjct: 582 KMGSQKYQDILNFRTTLPISTLKDDITQMLKENDVLVVCGETGSG 626
>gi|74150511|dbj|BAE32286.1| unnamed protein product [Mus musculus]
Length = 1194
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 671 ILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPLGVRKIVLA 730
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSIT++DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 731 TNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 785
>gi|395856357|ref|XP_003800595.1| PREDICTED: putative ATP-dependent RNA helicase DHX30 isoform 2
[Otolemur garnettii]
Length = 1155
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 632 ILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPIGVRKIVLA 691
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSIT++DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 692 TNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 746
>gi|358248315|ref|NP_001239611.1| putative ATP-dependent RNA helicase DHX30 isoform 1 [Mus musculus]
Length = 1194
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 671 ILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPLGVRKIVLA 730
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSIT++DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 731 TNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 785
>gi|524950033|ref|XP_005075033.1| PREDICTED: putative ATP-dependent RNA helicase DHX30 isoform X2
[Mesocricetus auratus]
Length = 1166
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 643 ILCFLPGWQEIKGVQQRLQEALGVHESKYLILPVHSNIPMMDQKAIFQQPPLGVRKIVLA 702
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSIT++DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 703 TNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 757
>gi|412990022|emb|CCO20664.1| predicted protein [Bathycoccus prasinos]
Length = 1219
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 59/115 (51%), Positives = 79/115 (68%), Gaps = 2/115 (1%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I+ + ++ + QI+PLHSM+ Q+ +F PP GVRK+VL+
Sbjct: 619 ILVFLPGWDEISKIKDALSDQAGLTD--VQIMPLHSMVSPQDQRKVFQKPPRGVRKVVLS 676
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAET++TIDD+VYV+D GK K +D ++TL WIS A+A QR+GRAGR
Sbjct: 677 TNIAETAVTIDDVVYVIDSGKLKEKGYDAYTAVSTLHQTWISKASATQRKGRAGR 731
>gi|19111156|ref|NP_579925.1| putative ATP-dependent RNA helicase DHX30 isoform 2 [Mus musculus]
gi|81916736|sp|Q99PU8.1|DHX30_MOUSE RecName: Full=Putative ATP-dependent RNA helicase DHX30; AltName:
Full=DEAH box protein 30
gi|13111310|dbj|BAB32789.1| HELG [Mus musculus musculus]
Length = 1217
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 694 ILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPLGVRKIVLA 753
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSIT++DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 754 TNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 808
>gi|524950031|ref|XP_005075032.1| PREDICTED: putative ATP-dependent RNA helicase DHX30 isoform X1
[Mesocricetus auratus]
Length = 1222
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 699 ILCFLPGWQEIKGVQQRLQEALGVHESKYLILPVHSNIPMMDQKAIFQQPPLGVRKIVLA 758
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSIT++DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 759 TNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 813
>gi|507714497|ref|XP_004648282.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 isoform X2
[Octodon degus]
Length = 988
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 73/169 (43%), Positives = 99/169 (58%), Gaps = 21/169 (12%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I++LH + F S V+Q +F P GVRKIV+A
Sbjct: 485 ILVFLPGWDNISTLHDLLMSQVMFKS--------------VNQTQVFKRTPPGVRKIVIA 530
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITIDD+V+V+D GK K ++FD ++NI+T+ EW+S ANAKQR+GRAGR
Sbjct: 531 TNIAETSITIDDVVFVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGH 590
Query: 309 ETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC---TTQRPGAILVFL 354
Y ++L D +L +++ + L+ +C R G I FL
Sbjct: 591 CYHLYNGLRASLLDDYQLP----EILRTPLEELCLQIKILRLGGIAYFL 635
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Query: 25 NDP--VLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETG 82
N+P LD +++ +K RY EM R+KLPSY ++ ++D++ +Q+TVISGETG
Sbjct: 168 NEPNVTLDQQLLEDLQKKKTDLRYIEMQRFREKLPSYGLQKELVDLIDKHQVTVISGETG 227
Query: 83 SG 84
G
Sbjct: 228 CG 229
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 44/73 (60%), Gaps = 4/73 (5%)
Query: 303 RTLKRSETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINS 362
R L+R +Y + +++L+ + + V+ +I +L++HI + GAILVFLPGWD I++
Sbjct: 442 RELRR----RYSANTVDVLERMDDDKVDLTLIAALIRHIVLEEEEGAILVFLPGWDNIST 497
Query: 363 LHRSMCQSSFFNS 375
LH + F S
Sbjct: 498 LHDLLMSQVMFKS 510
>gi|395856355|ref|XP_003800594.1| PREDICTED: putative ATP-dependent RNA helicase DHX30 isoform 1
[Otolemur garnettii]
Length = 1194
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 671 ILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPIGVRKIVLA 730
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSIT++DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 731 TNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 785
>gi|299470310|emb|CBN78360.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1339
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 63/158 (39%), Positives = 100/158 (63%), Gaps = 6/158 (3%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL+FL GW+ I+++H + + + +++ LHS +PT Q+ +F PP GVRKIV+A
Sbjct: 445 ILIFLSGWEEISAVHDKL--EALPEARAWRLYALHSQMPTSQQRDVFLRPPRGVRKIVIA 502
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAE+SITIDD+VYV+D GK K ++D + + +L P W+S A++KQRRGRAGR
Sbjct: 503 TNIAESSITIDDVVYVIDGGKHKEKSYDPEAKVQSLLPAWVSQASSKQRRGRAGRVQPGR 562
Query: 309 ETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQR 346
YP ++ + + +L +++ + L+ +C R
Sbjct: 563 CWHVYPRSKVSEMNEYQLP----EIVRTSLESLCLQVR 596
>gi|328712008|ref|XP_001944312.2| PREDICTED: dosage compensation regulator-like [Acyrthosiphon pisum]
Length = 1430
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 56/115 (48%), Positives = 80/115 (69%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+L+FLPGW I++L + + + FF SS+F ++PLHS LP Q+ +F P GVRK++L+
Sbjct: 834 VLIFLPGWTLISALQKYLTEKQFFASSKFCVLPLHSQLPCADQRRVFEPVPSGVRKVILS 893
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITIDD+V+V++ GK K+ F +N+ W S N +QR+GRAGR
Sbjct: 894 TNIAETSITIDDVVFVINYGKAKIKFFTSHNNMTHYATVWASKTNMQQRKGRAGR 948
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 29 LDAAFKKEMIRKLQSRR-YQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
L K+ +KL S + ++E +E R +LP + ++ +LD++R N I +I G TG G
Sbjct: 535 LSEELAKDYTKKLNSSKGFKESIEMRSQLPVFNKKNEILDIIRKNSIVIIQGSTGCG 591
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 4/73 (5%)
Query: 310 TQQYPNDVLNMLKDPELEGVNNDVIFSLLQHI-CTTQRPGAILVFLPGWDTINSLHRSMC 368
+ YP +V + + + V+ ++I +LL HI PGA+L+FLPGW I++L + +
Sbjct: 793 SDDYPPEVKSKVALISEKYVDFEIIEALLTHIEIKMNIPGAVLIFLPGWTLISALQKYLT 852
Query: 369 QSSFFNS---CLL 378
+ FF S C+L
Sbjct: 853 EKQFFASSKFCVL 865
>gi|465962014|gb|EMP29579.1| Putative ATP-dependent RNA helicase DHX30 [Chelonia mydas]
Length = 568
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 58/115 (50%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+L FLPGW I + + + ++ +SR+ ++P+HS +P + Q++IF PP GVRKIVLA
Sbjct: 56 VLCFLPGWQEIKGVQQRLLETLGSQNSRYLVLPVHSNIPMMDQQNIFQRPPPGVRKIVLA 115
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+DIV+VVD G K +D+K ++ L+ W+S +N QRRGRAGR
Sbjct: 116 TNIAETSITINDIVHVVDSGTHKEERYDLKTKVSCLETVWVSKSNVVQRRGRAGR 170
>gi|507651161|ref|XP_004704043.1| PREDICTED: putative ATP-dependent RNA helicase DHX30 isoform X2
[Echinops telfairi]
Length = 1155
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 81/115 (70%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + ++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 632 ILCFLPGWQEIKGVQQRLQEALGMHEGKYLILPVHSNIPMMDQKAIFQQPPLGVRKIVLA 691
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 692 TNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 746
>gi|462404806|gb|EMJ10270.1| hypothetical protein PRUPE_ppa000376mg [Prunus persica]
Length = 1230
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 72/167 (43%), Positives = 99/167 (59%), Gaps = 2/167 (1%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVF+ GWD INSL + + SR ++ H +P+ Q+ IF+ P + +RKIVL
Sbjct: 606 ILVFMTGWDDINSLKDQLQSHPLLGDPSRVLLLACHGSMPSSEQRLIFDKPEDEIRKIVL 665
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKR 307
ATN+AETSITI+D+V+VVDCGK K +++D +N L P WIS A ++QRRGRAGR
Sbjct: 666 ATNMAETSITINDVVFVVDCGKAKETSYDALNNTPCLLPSWISKAASRQRRGRAGRVQPG 725
Query: 308 SETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFL 354
YP V + D +L + + SL I + Q G+I FL
Sbjct: 726 ECYHLYPRCVYDAFADYQLPELLRTPLQSLCLQIKSLQL-GSISEFL 771
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 30/43 (69%)
Query: 47 QEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHL 89
Q+MLE R+ LP+Y+ +DA+L + NQ+ V+SGETG G L
Sbjct: 314 QKMLELRRSLPAYKEKDALLKAISENQVIVVSGETGCGKTTQL 356
Score = 45.8 bits (107), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 28/41 (68%), Gaps = 2/41 (4%)
Query: 323 DPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSL 363
+P+ G N +I LL HI +RPGAILVF+ GWD INSL
Sbjct: 581 NPDSIGFN--LIEHLLCHIVRKERPGAILVFMTGWDDINSL 619
>gi|507651157|ref|XP_004704042.1| PREDICTED: putative ATP-dependent RNA helicase DHX30 isoform X1
[Echinops telfairi]
Length = 1194
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 81/115 (70%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + ++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 671 ILCFLPGWQEIKGVQQRLQEALGMHEGKYLILPVHSNIPMMDQKAIFQQPPLGVRKIVLA 730
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 731 TNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 785
>gi|74226873|dbj|BAE27081.1| unnamed protein product [Mus musculus]
Length = 1194
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 59/115 (51%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 671 ILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPLGVRKIVLA 730
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSIT++DIV+VVD G K +D++ ++ L+ W+S AN QRRGRAGR
Sbjct: 731 TNIAETSITVNDIVHVVDSGLHKEERYDLRTKVSCLETVWVSRANVIQRRGRAGR 785
>gi|405968395|gb|EKC33469.1| Putative ATP-dependent RNA helicase DHX57 [Crassostrea gigas]
Length = 1384
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 63/118 (53%), Positives = 79/118 (66%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNS---SRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
+LVFLPG+ I L+ ++ F + RF+IIPLHS L + Q ++F PPEGV KI
Sbjct: 847 VLVFLPGFAEIQQLYEALTSHKVFGARSGGRFKIIPLHSTLSSEDQHAVFLKPPEGVTKI 906
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
VLATNIAETSITIDDI +V+D GK K +D + +L W+S ANA QRRGRAGR
Sbjct: 907 VLATNIAETSITIDDITFVIDAGKMKEKRYDSCKGMESLDTVWVSRANALQRRGRAGR 964
Score = 42.0 bits (97), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 33/52 (63%)
Query: 33 FKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
K + RKL ++ M+ RK+LP++ +D +L ++++Q+ VISG TG G
Sbjct: 526 LKDDYQRKLGTKALGSMISQRKRLPAWNKQDDILAALKSHQVLVISGMTGCG 577
>gi|75070502|sp|Q5R607.1|DHX30_PONAB RecName: Full=Putative ATP-dependent RNA helicase DHX30; AltName:
Full=DEAH box protein 30
gi|55732210|emb|CAH92809.1| hypothetical protein [Pongo abelii]
Length = 1194
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 81/115 (70%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 671 ILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLA 730
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETS TI+DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 731 TNIAETSTTINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 785
>gi|328714705|ref|XP_001943592.2| PREDICTED: ATP-dependent RNA helicase A-like protein-like
[Acyrthosiphon pisum]
Length = 1059
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 56/115 (48%), Positives = 80/115 (69%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+L+FLPGW+ I +L + + Q FF SS+F I+PLHS +P Q+ +F P GVRK++L+
Sbjct: 463 VLIFLPGWNLIFALQKYLTQKQFFASSKFCILPLHSQIPCADQRKVFEPVPSGVRKVILS 522
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+D+V+V++ GK K+ F +N+ W S N +QR+GRAGR
Sbjct: 523 TNIAETSITINDVVFVINYGKAKIKLFTTHNNMTHYATVWASKTNMQQRKGRAGR 577
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 4/73 (5%)
Query: 310 TQQYPNDVLNMLKDPELEGVNNDVIFSLLQHI-CTTQRPGAILVFLPGWDTINSLHRSMC 368
+ YP D+ + + + V+ ++I +LL HI PGA+L+FLPGW+ I +L + +
Sbjct: 422 SDDYPPDIKSKVAMISEKDVDFEIIEALLTHIEIEMNTPGAVLIFLPGWNLIFALQKYLT 481
Query: 369 QSSFFNS---CLL 378
Q FF S C+L
Sbjct: 482 QKQFFASSKFCIL 494
Score = 42.4 bits (98), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 29 LDAAFKKEMIRKLQSRR-YQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
L K+ KL S ++E + R +LP + +D +LD++R N I +I G TG G
Sbjct: 164 LSEELAKDYAMKLNSSEGFKESIAMRSQLPVFAKKDNILDVIRKNSIVIIQGSTGCG 220
>gi|395516112|ref|XP_003762238.1| PREDICTED: putative ATP-dependent RNA helicase DHX30-like
[Sarcophilus harrisii]
Length = 1192
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 81/115 (70%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 669 ILCFLPGWQEIKGVQQRLQEALGSYESKYLILPVHSNIPMMDQKAIFQQPPTGVRKIVLA 728
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSIT++DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 729 TNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 783
>gi|196000807|ref|XP_002110271.1| hypothetical protein TRIADDRAFT_54096 [Trichoplax adhaerens]
gi|190586222|gb|EDV26275.1| hypothetical protein TRIADDRAFT_54096 [Trichoplax adhaerens]
Length = 897
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 56/115 (48%), Positives = 81/115 (70%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL F+PGWD I L+ ++ + F+S ++ I+PLHS L T +Q+ IF+ P + VRKI++A
Sbjct: 409 ILCFVPGWDDIRKLYETLIGNPRFSSDQYVILPLHSQLSTANQRKIFDKPQQSVRKIIIA 468
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
T+IAETSIT++D+ +V+DCGK K +D TL P W S ++A+QR GRAGR
Sbjct: 469 TDIAETSITVNDVCFVIDCGKVKEKLYDAVGGFETLAPVWTSKSSARQRAGRAGR 523
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 38/61 (62%)
Query: 29 LDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLH 88
LD +K+++ + YQ++L+ RKKLP + M++ +L +R+NQ VISG TG G
Sbjct: 102 LDDLYKEQLNETRTTPHYQQLLDVRKKLPIFSMQNKILKSIRDNQAIVISGHTGCGKTTQ 161
Query: 89 L 89
L
Sbjct: 162 L 162
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%)
Query: 310 TQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQ 369
+ +Y V +K + ++ +I LL HI + GAIL F+PGWD I L+ ++
Sbjct: 369 SNKYSPTVAKSIKQMAFKKLDFTLIQDLLIHINSNMEEGAILCFVPGWDDIRKLYETLIG 428
Query: 370 SSFFNS 375
+ F+S
Sbjct: 429 NPRFSS 434
>gi|334333642|ref|XP_001375513.2| PREDICTED: putative ATP-dependent RNA helicase DHX30-like
[Monodelphis domestica]
Length = 1379
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 81/115 (70%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 856 ILCFLPGWQEIKGVQQRLQEALGSYESKYLILPVHSNIPMMDQKAIFQQPPTGVRKIVLA 915
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSIT++DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 916 TNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 970
>gi|524877461|ref|XP_005095432.1| PREDICTED: putative ATP-dependent RNA helicase DHX57-like [Aplysia
californica]
Length = 1383
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/118 (53%), Positives = 83/118 (70%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF---NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVFLPG+ I +L+ + +S F N R++IIPLHS L + Q ++F P EGV KI
Sbjct: 874 ILVFLPGFAEIQTLYDLLLATSEFGLRNKGRYKIIPLHSTLSSEDQNAVFRKPKEGVTKI 933
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
V+ATNIAETSITIDD+V+VVD G+ K +D ++ +L+ W+S ANA QRRGRAGR
Sbjct: 934 VIATNIAETSITIDDVVFVVDAGRMKEKRYDQAKSMESLETVWVSRANALQRRGRAGR 991
Score = 42.4 bits (98), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 313 YPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQ----RPGAILVFLPGWDTINSLHRSMC 368
Y + L L +++ +N D++ +LL++I T + GAILVFLPG+ I +L+ +
Sbjct: 833 YQSVTLKTLSTLDMDKINYDLLVALLEYIATGNHEFPQEGAILVFLPGFAEIQTLYDLLL 892
Query: 369 QSSFFNSCLLYEFAMVDNKPKEIITVRDCLSFECKPSTAKIIKE 412
+S EF + + +II + LS E + + + KE
Sbjct: 893 ATS--------EFGLRNKGRYKIIPLHSTLSSEDQNAVFRKPKE 928
>gi|334347447|ref|XP_003341929.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 isoform 2
[Monodelphis domestica]
Length = 996
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/169 (43%), Positives = 99/169 (58%), Gaps = 20/169 (11%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I++LH + F S +Q S+F P GVRKIV+A
Sbjct: 492 ILVFLPGWDNISTLHDLLMSQVMFKS-------------VSNQTSVFKRTPPGVRKIVIA 538
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITIDD+V+V+D GK K ++FD ++NI+T+ EW+S ANAKQR+GRAGR
Sbjct: 539 TNIAETSITIDDVVHVIDGGKIKETHFDTQNNISTMAAEWVSKANAKQRKGRAGRVQPGH 598
Query: 309 ETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC---TTQRPGAILVFL 354
Y ++L D +L +++ + L+ +C R G I FL
Sbjct: 599 CYHLYNGLRASLLDDYQLP----EILRTPLEELCLQIKILRLGGIAYFL 643
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 40/59 (67%)
Query: 26 DPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
D LD K+++ RK RY EM R+KLPSY M+ +++++ NNQ+TVISGETG G
Sbjct: 178 DVDLDQQLKEDLKRKKSDPRYIEMQHFREKLPSYGMQKELVNLINNNQVTVISGETGCG 236
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Query: 316 DVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
DVL M+ D + V+ +++ +L++HI + GAILVFLPGWD I++LH + F S
Sbjct: 461 DVLEMMDD---DKVDLNLVAALIRHIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKS 517
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 376 CLLY---EFAMVDNKPKEIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHPGTTA 432
CLL+ + ++ +K +E I V + + F+ A ++KELR LD LL K+ +P
Sbjct: 897 CLLFFGGDISIQKDKDQETIAVDEWIVFQSPARIAHLVKELRKELDALLQEKIENPHPVD 956
Query: 433 WGD 435
W +
Sbjct: 957 WKE 959
>gi|426249964|ref|XP_004023565.1| PREDICTED: LOW QUALITY PROTEIN: putative ATP-dependent RNA helicase
DHX30 [Ovis aries]
Length = 1012
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/114 (52%), Positives = 81/114 (71%)
Query: 190 LVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLAT 249
L FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLAT
Sbjct: 603 LCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPIGVRKIVLAT 662
Query: 250 NIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
NIAETSITI+DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 663 NIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 716
>gi|307111136|gb|EFN59371.1| hypothetical protein CHLNCDRAFT_137841 [Chlorella variabilis]
Length = 1495
Score = 127 bits (320), Expect = 1e-26, Method: Composition-based stats.
Identities = 62/119 (52%), Positives = 78/119 (65%), Gaps = 4/119 (3%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPG I LH +C S F +S +IPLHS + Q+ F PP GVRK+VLA
Sbjct: 960 VLVFLPGMGEIQELHSRLCASRRFAASSAWVIPLHSTVSPSEQRQAFRVPPPGVRKVVLA 1019
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLAN----AKQRRGRAGR 303
TNIAETS+TI+D+VYVVD GK K +D ++ L +W+S A+ AKQRRGRAGR
Sbjct: 1020 TNIAETSLTIEDVVYVVDAGKLKERRYDASRGMSLLVEDWVSAASGKGGAKQRRGRAGR 1078
Score = 42.7 bits (99), Expect = 0.43, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 305 LKRSETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQ--RPGAILVFLPGWDTINS 362
KR E Y V+ L + + ++ +++ L+ HI +Q R GA+LVFLPG I
Sbjct: 913 FKREELAGYSPSVVRNLSVLDEDRLDFELLEQLVAHIDESQAGREGAVLVFLPGMGEIQE 972
Query: 363 LHRSMCQSSFF 373
LH +C S F
Sbjct: 973 LHSRLCASRRF 983
>gi|363737300|ref|XP_003641832.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 isoformX1
[Gallus gallus]
Length = 981
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/115 (53%), Positives = 79/115 (68%), Gaps = 14/115 (12%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I++LH + F S V+Q +F P GVRKIV+A
Sbjct: 478 ILVFLPGWDNISTLHDLLMSQVMFKS--------------VNQTQVFKKTPPGVRKIVIA 523
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITIDD+V+V+D GK K ++FD ++NI+T+ EW+S ANAKQR+GRAGR
Sbjct: 524 TNIAETSITIDDVVFVIDGGKIKETHFDTQNNISTMAAEWVSKANAKQRKGRAGR 578
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 40/60 (66%)
Query: 25 NDPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
D LD K+++ +K RY EM R+KLPSY MR +++++ NN++TVISGETG G
Sbjct: 163 QDADLDEQLKEDLRKKKSDPRYIEMQRFREKLPSYGMRQELVNLINNNRVTVISGETGCG 222
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 316 DVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
D L M+ D + V+ D+I +L++HI + GAILVFLPGWD I++LH + F S
Sbjct: 447 DALEMMDD---DKVDLDLIAALIRHIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKS 503
>gi|524985072|ref|XP_005040501.1| PREDICTED: putative ATP-dependent RNA helicase DHX30 isoform X2
[Ficedula albicollis]
Length = 1173
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/133 (45%), Positives = 86/133 (64%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + + +SR+ ++P+HS +P + Q++IF PP GVRKIVLA
Sbjct: 656 ILCFLPGWQEIKGVQQRLLEMLGSQNSRYLVLPVHSNIPMMDQQNIFQRPPPGVRKIVLA 715
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITI+DIV+VVD G K +D+K ++ L+ W+S +N QRRGRAGR
Sbjct: 716 TNIAETSITINDIVHVVDSGTHKEERYDLKTKVSCLETVWVSKSNVVQRRGRAGRCQSGF 775
Query: 309 ETQQYPNDVLNML 321
+P L+ +
Sbjct: 776 AYHLFPRSRLDKM 788
>gi|524985070|ref|XP_005040500.1| PREDICTED: putative ATP-dependent RNA helicase DHX30 isoform X1
[Ficedula albicollis]
Length = 1175
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/133 (45%), Positives = 86/133 (64%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + + +SR+ ++P+HS +P + Q++IF PP GVRKIVLA
Sbjct: 658 ILCFLPGWQEIKGVQQRLLEMLGSQNSRYLVLPVHSNIPMMDQQNIFQRPPPGVRKIVLA 717
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITI+DIV+VVD G K +D+K ++ L+ W+S +N QRRGRAGR
Sbjct: 718 TNIAETSITINDIVHVVDSGTHKEERYDLKTKVSCLETVWVSKSNVVQRRGRAGRCQSGF 777
Query: 309 ETQQYPNDVLNML 321
+P L+ +
Sbjct: 778 AYHLFPRSRLDKM 790
>gi|514770974|ref|XP_005025519.1| PREDICTED: putative ATP-dependent RNA helicase DHX30 isoform X2
[Anas platyrhynchos]
Length = 1028
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/115 (51%), Positives = 81/115 (70%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + + +SR+ ++P+HS +P + Q++IF PP GVRKIVLA
Sbjct: 511 ILCFLPGWQEIKGVQQRLLEMLGSQNSRYLVLPVHSNIPMMDQQNIFQRPPPGVRKIVLA 570
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+DIV+VVD G K +D+K ++ L+ W+S +N QRRGRAGR
Sbjct: 571 TNIAETSITINDIVHVVDSGTHKEERYDLKTKVSCLETVWVSKSNVVQRRGRAGR 625
>gi|449492012|ref|XP_002191495.2| PREDICTED: putative ATP-dependent RNA helicase DHX30 [Taeniopygia
guttata]
Length = 1173
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/133 (45%), Positives = 86/133 (64%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + + +SR+ ++P+HS +P + Q++IF PP GVRKIVLA
Sbjct: 656 ILCFLPGWQEIKGVQQRLLEMLGSQNSRYLVLPVHSNIPMMDQQNIFQRPPPGVRKIVLA 715
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITI+DIV+VVD G K +D+K ++ L+ W+S +N QRRGRAGR
Sbjct: 716 TNIAETSITINDIVHVVDSGTHKEERYDLKTKVSCLETVWVSKSNVVQRRGRAGRCQSGF 775
Query: 309 ETQQYPNDVLNML 321
+P L+ +
Sbjct: 776 AYHLFPRSRLDKM 788
>gi|61098106|ref|NP_001012869.1| putative ATP-dependent RNA helicase DHX30 precursor [Gallus gallus]
gi|82233708|sp|Q5ZI74.1|DHX30_CHICK RecName: Full=Putative ATP-dependent RNA helicase DHX30; AltName:
Full=DEAH box protein 30
gi|53136480|emb|CAG32569.1| hypothetical protein RCJMB04_29l1 [Gallus gallus]
Length = 1231
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/133 (45%), Positives = 86/133 (64%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + + +SR+ ++P+HS +P + Q++IF PP GVRKIVLA
Sbjct: 714 ILCFLPGWQEIKGVQQRLLEMLGSQNSRYLVLPVHSNIPMMDQQNIFQRPPPGVRKIVLA 773
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITI+DIV+VVD G K +D+K ++ L+ W+S +N QRRGRAGR
Sbjct: 774 TNIAETSITINDIVHVVDSGTHKEERYDLKTKVSCLETVWVSKSNVVQRRGRAGRCQSGF 833
Query: 309 ETQQYPNDVLNML 321
+P L+ +
Sbjct: 834 AYHLFPRSRLDKM 846
>gi|195047077|ref|XP_001992267.1| GH24656 [Drosophila grimshawi]
gi|193893108|gb|EDV91974.1| GH24656 [Drosophila grimshawi]
Length = 1291
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/119 (50%), Positives = 81/119 (68%), Gaps = 2/119 (1%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF--NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIV 246
IL+FLPG+ I S+H ++ SS F + ++ ++PLHS L + Q +F P G RKIV
Sbjct: 758 ILIFLPGFQEIQSVHNALLDSSIFAPRAGKYVLVPLHSALSSEDQALVFKRAPAGKRKIV 817
Query: 247 LATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTL 305
L+TNIAETS+TIDD V+V+DCG K FD N+ +L W+S ANAKQR+GRAGR +
Sbjct: 818 LSTNIAETSVTIDDCVFVIDCGLMKEKGFDSNRNMESLDLVWVSRANAKQRKGRAGRVM 876
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 31/43 (72%)
Query: 42 QSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+ RY +++EAR+KLP++ + +L ++ ++ + VISGETG G
Sbjct: 442 RDERYHKLIEARRKLPAFAEMEHILALIDSSPVVVISGETGCG 484
>gi|195387363|ref|XP_002052365.1| GJ22099 [Drosophila virilis]
gi|194148822|gb|EDW64520.1| GJ22099 [Drosophila virilis]
Length = 931
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 56/119 (47%), Positives = 87/119 (73%), Gaps = 4/119 (3%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQ----IIPLHSMLPTVSQKSIFNTPPEGVRK 244
ILVF+PG+ I+ LH ++ R++ + PLHSMLP+V Q+S+F P G RK
Sbjct: 412 ILVFVPGYSQISELHNTLLNPRLALGQRWRDHLLVYPLHSMLPSVEQQSVFRRAPSGKRK 471
Query: 245 IVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
++++T IAETS+TIDD+VYV++ G+TK+S++D++ NI +L+ W++ AN +QR+GRAGR
Sbjct: 472 VIISTIIAETSVTIDDVVYVINTGRTKVSSYDIETNIQSLEECWVTHANTQQRKGRAGR 530
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 312 QYPNDVLNMLKDPELEGVNN-DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSM 367
+Y + VL L+ P EG + D I +L+ +ICT + GAILVF+PG+ I+ LH ++
Sbjct: 373 RYDSKVLEQLRLPCSEGCADIDFIANLIYYICTMKSEGAILVFVPGYSQISELHNTL 429
>gi|485630031|gb|EOD25315.1| hypothetical protein EMIHUDRAFT_73936 [Emiliania huxleyi CCMP1516]
Length = 825
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/117 (50%), Positives = 81/117 (69%), Gaps = 2/117 (1%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSS--RFQIIPLHSMLPTVSQKSIFNTPPEGVRKIV 246
+LVFLPG+ I ++H ++ + F++ R ++PLHS LP Q+ +F PP GVRK+V
Sbjct: 337 VLVFLPGFKEIQAVHEALLATPRFSAEPHRAWLLPLHSTLPPEDQRRVFERPPAGVRKVV 396
Query: 247 LATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
LATNIAETS+TIDD+V+VVDC + K +D + +L +S ANAKQRRGRAGR
Sbjct: 397 LATNIAETSVTIDDVVFVVDCARMKEKRYDPARRMESLDDVLVSRANAKQRRGRAGR 453
>gi|514770970|ref|XP_005025518.1| PREDICTED: putative ATP-dependent RNA helicase DHX30 isoform X1
[Anas platyrhynchos]
Length = 1216
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/133 (45%), Positives = 86/133 (64%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + + +SR+ ++P+HS +P + Q++IF PP GVRKIVLA
Sbjct: 699 ILCFLPGWQEIKGVQQRLLEMLGSQNSRYLVLPVHSNIPMMDQQNIFQRPPPGVRKIVLA 758
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITI+DIV+VVD G K +D+K ++ L+ W+S +N QRRGRAGR
Sbjct: 759 TNIAETSITINDIVHVVDSGTHKEERYDLKTKVSCLETVWVSKSNVVQRRGRAGRCQSGF 818
Query: 309 ETQQYPNDVLNML 321
+P L+ +
Sbjct: 819 AYHLFPRSRLDKM 831
>gi|483505627|gb|EOA97100.1| Putative ATP-dependent RNA helicase DHX30, partial [Anas
platyrhynchos]
Length = 1172
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/133 (45%), Positives = 86/133 (64%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + + +SR+ ++P+HS +P + Q++IF PP GVRKIVLA
Sbjct: 655 ILCFLPGWQEIKGVQQRLLEMLGSQNSRYLVLPVHSNIPMMDQQNIFQRPPPGVRKIVLA 714
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITI+DIV+VVD G K +D+K ++ L+ W+S +N QRRGRAGR
Sbjct: 715 TNIAETSITINDIVHVVDSGTHKEERYDLKTKVSCLETVWVSKSNVVQRRGRAGRCQSGF 774
Query: 309 ETQQYPNDVLNML 321
+P L+ +
Sbjct: 775 AYHLFPRSRLDKM 787
>gi|326921357|ref|XP_003206927.1| PREDICTED: LOW QUALITY PROTEIN: putative ATP-dependent RNA helicase
DHX30-like, partial [Meleagris gallopavo]
Length = 1115
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/133 (45%), Positives = 86/133 (64%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + + +SR+ ++P+HS +P + Q++IF PP GVRKIVLA
Sbjct: 598 ILCFLPGWQEIKGVQQRLLEMLGSQNSRYLVLPVHSNIPMMDQQNIFQRPPPGVRKIVLA 657
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITI+DIV+VVD G K +D+K ++ L+ W+S +N QRRGRAGR
Sbjct: 658 TNIAETSITINDIVHVVDSGTHKEERYDLKTKVSCLETVWVSKSNVVQRRGRAGRCQSGF 717
Query: 309 ETQQYPNDVLNML 321
+P L+ +
Sbjct: 718 AYHLFPRSRLDKM 730
>gi|295829040|gb|ADG38189.1| AT2G30800-like protein [Capsella grandiflora]
gi|295829050|gb|ADG38194.1| AT2G30800-like protein [Neslia paniculata]
gi|345289957|gb|AEN81470.1| AT2G30800-like protein, partial [Capsella rubella]
gi|345289959|gb|AEN81471.1| AT2G30800-like protein, partial [Capsella rubella]
gi|345289961|gb|AEN81472.1| AT2G30800-like protein, partial [Capsella rubella]
gi|345289965|gb|AEN81474.1| AT2G30800-like protein, partial [Capsella rubella]
gi|345289967|gb|AEN81475.1| AT2G30800-like protein, partial [Capsella rubella]
Length = 173
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/105 (54%), Positives = 79/105 (75%), Gaps = 1/105 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFLPGWD IN + + ++ FF +S++F II LHSM+P QK +FN PP G RKIVL
Sbjct: 69 ILVFLPGWDDINKTRQRLLENPFFADSAKFDIICLHSMVPAGEQKKVFNRPPRGCRKIVL 128
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLA 292
ATNIAE+++TIDD+VYV+D G+ K ++D +N++TL+ W+S A
Sbjct: 129 ATNIAESAVTIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKA 173
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 327 EGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFF 373
E V+ +I L++ IC GAILVFLPGWD IN + + ++ FF
Sbjct: 46 EQVDVSLILQLMRKICGDSEDGAILVFLPGWDDINKTRQRLLENPFF 92
>gi|460380006|ref|XP_004235749.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Solanum
lycopersicum]
Length = 1201
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 94/155 (60%), Gaps = 5/155 (3%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNS-SRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
+LVF+ GWD IN++ + SR ++ H + + QK IF+ P +G+RKIVL
Sbjct: 586 VLVFMTGWDDINTVKDQLQAHPLLGDPSRVLLLACHGSMASAEQKLIFDKPEDGIRKIVL 645
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKR 307
ATN+AETSITI+D+V+VVDCGK K +++D +N L P WIS A+A+QR+GRAGR
Sbjct: 646 ATNMAETSITINDVVFVVDCGKAKETSYDAINNTPCLLPSWISKASARQRKGRAGRVQPG 705
Query: 308 SETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC 342
YP V D +L +++ + LQ +C
Sbjct: 706 ECYHLYPRCVYEAFADYQLP----ELLRTPLQSLC 736
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 30/43 (69%)
Query: 47 QEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHL 89
Q+MLE R+ LP+Y+ R+A+L + NQ+ V+SGETG G L
Sbjct: 296 QKMLELRRNLPAYKEREALLRAISENQVVVVSGETGCGKTTQL 338
Score = 45.8 bits (107), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 29/41 (70%), Gaps = 2/41 (4%)
Query: 323 DPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSL 363
+P+ G N +I +L HIC +RPGA+LVF+ GWD IN++
Sbjct: 561 NPDSIGFN--LIEHVLCHICRNERPGAVLVFMTGWDDINTV 599
>gi|158255968|dbj|BAF83955.1| unnamed protein product [Homo sapiens]
Length = 1155
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 81/115 (70%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 632 ILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLA 691
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+DIV+VVD G K +D+K ++ L+ W+S AN QRR RAGR
Sbjct: 692 TNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRDRAGR 746
>gi|295829046|gb|ADG38192.1| AT2G30800-like protein [Capsella grandiflora]
gi|295829048|gb|ADG38193.1| AT2G30800-like protein [Capsella grandiflora]
Length = 173
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/105 (54%), Positives = 79/105 (75%), Gaps = 1/105 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFLPGWD IN + + ++ FF +S++F II LHSM+P QK +FN PP G RKIVL
Sbjct: 69 ILVFLPGWDDINKTRQRLLENPFFADSAKFDIICLHSMVPAGEQKKVFNRPPRGCRKIVL 128
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLA 292
ATNIAE+++TIDD+VYV+D G+ K ++D +N++TL+ W+S A
Sbjct: 129 ATNIAESAVTIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKA 173
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 327 EGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFF 373
E V+ +I L++ IC GAILVFLPGWD IN + + ++ FF
Sbjct: 46 EQVDVSLILQLMRKICGDSEDGAILVFLPGWDDINKTRQRLLENPFF 92
>gi|295829042|gb|ADG38190.1| AT2G30800-like protein [Capsella grandiflora]
gi|295829044|gb|ADG38191.1| AT2G30800-like protein [Capsella grandiflora]
Length = 173
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/105 (54%), Positives = 79/105 (75%), Gaps = 1/105 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFLPGWD IN + + ++ FF +S++F II LHSM+P QK +FN PP G RKIVL
Sbjct: 69 ILVFLPGWDDINKTRQRLLENPFFADSAKFDIICLHSMVPAGEQKKVFNRPPRGCRKIVL 128
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLA 292
ATNIAE+++TIDD+VYV+D G+ K ++D +N++TL+ W+S A
Sbjct: 129 ATNIAESAVTIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKA 173
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 327 EGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFF 373
E V+ +I L++ IC GAILVFLPGWD IN + + ++ FF
Sbjct: 46 EQVDVSLILQLMRKICGDSEDGAILVFLPGWDDINKTRQRLLENPFF 92
>gi|432917465|ref|XP_004079522.1| PREDICTED: putative ATP-dependent RNA helicase DHX30-like [Oryzias
latipes]
Length = 1126
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 75/115 (65%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+L FLPGW I ++ + F+S I+PLHS L Q+ +F PPEG RKIVLA
Sbjct: 603 VLCFLPGWQDIRAVQDKLEARPHFSSGSHMILPLHSSLSVPDQQRVFQRPPEGRRKIVLA 662
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITIDDIV+VVD G K N+D + ++ L WIS +N QR+GRAGR
Sbjct: 663 TNIAETSITIDDIVHVVDAGTHKEQNYDARTKVSCLDTVWISRSNVTQRKGRAGR 717
>gi|38305348|gb|AAR16192.1| antigen MLAA-43 [Homo sapiens]
Length = 210
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/112 (51%), Positives = 80/112 (71%)
Query: 192 FLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLATNI 251
FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLATNI
Sbjct: 5 FLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPLGVRKIVLATNI 64
Query: 252 AETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
AETSIT++DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 65 AETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 116
>gi|260793242|ref|XP_002591621.1| hypothetical protein BRAFLDRAFT_223352 [Branchiostoma floridae]
gi|229276830|gb|EEN47632.1| hypothetical protein BRAFLDRAFT_223352 [Branchiostoma floridae]
Length = 118
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/99 (61%), Positives = 75/99 (75%), Gaps = 11/99 (11%)
Query: 226 LPTVSQKSIFNTPPEGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLK 285
+PTV+Q +F PP+GVRKIVLATNIAETSITIDD+VYVVDCG+ K +FD+ +N+ATL+
Sbjct: 1 MPTVNQTQVFERPPQGVRKIVLATNIAETSITIDDVVYVVDCGQVKEKSFDITNNLATLQ 60
Query: 286 PEWISLANAKQRRGRAGRT-----------LKRSETQQY 313
P WIS A+AKQRRGRAGR LK S+ Q+Y
Sbjct: 61 PVWISKASAKQRRGRAGRVQPGVCFHLFSQLKESKMQEY 99
>gi|297737748|emb|CBI26949.3| unnamed protein product [Vitis vinifera]
Length = 1181
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/170 (41%), Positives = 102/170 (60%), Gaps = 8/170 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
+LVF+ GWD I+SL + +S + ++ H + + Q+ IF+ P +GVRKIVL
Sbjct: 565 VLVFMTGWDDISSLKDKLQAHPILGDSDQVLLLTCHGSMASAEQRLIFDEPRDGVRKIVL 624
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKR 307
ATNIAETSITI+D+V+VVDCGK K +++D +N L P WIS +A+QRRGRAGR
Sbjct: 625 ATNIAETSITINDVVFVVDCGKAKETSYDALNNTPCLLPSWISKVSAQQRRGRAGRVQPG 684
Query: 308 SETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC---TTQRPGAILVFL 354
YP V + D +L +++ + LQ +C + + G+I FL
Sbjct: 685 KCYHLYPRCVYDAFADYQLP----EILRTPLQSLCLQIKSLKLGSISEFL 730
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 29/41 (70%), Gaps = 2/41 (4%)
Query: 323 DPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSL 363
+P+ G N +I +LL HIC + PGA+LVF+ GWD I+SL
Sbjct: 540 NPDCIGFN--LIENLLCHICENECPGAVLVFMTGWDDISSL 578
Score = 42.7 bits (99), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 29/43 (67%)
Query: 42 QSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+S ++MLE R LP+ + +DA+L + NQ+ ++SGETG G
Sbjct: 270 ESTEGRKMLEFRGSLPASKEKDALLTAISGNQVVIVSGETGCG 312
>gi|356574252|ref|XP_003555264.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Glycine
max]
Length = 1209
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/170 (40%), Positives = 102/170 (60%), Gaps = 8/170 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
+LVF+ GWD I+SL + + +++R ++ H + + Q+ IF P +GVRKIVL
Sbjct: 596 VLVFMTGWDDISSLKEKLLTHTVLGDANRVLLLTCHGSMASSEQRLIFEEPEDGVRKIVL 655
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKR 307
TNIAETSITI+D+V+V+DCGK K +++D +N L P WIS +AKQRRGRAGR
Sbjct: 656 TTNIAETSITINDVVFVLDCGKAKETSYDALNNTPCLLPTWISKVSAKQRRGRAGRVQPG 715
Query: 308 SETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC---TTQRPGAILVFL 354
YP V + + +L +++ + LQ +C + R G+I FL
Sbjct: 716 ECYHLYPRCVYDAFAEYQLP----EILRTPLQSLCLQIKSLRLGSISEFL 761
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 34/56 (60%), Gaps = 10/56 (17%)
Query: 39 RKLQSRRYQE----------MLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
R LQ R Q+ MLE R+ LP+Y+ ++A+L ++ NQ+ +ISGETG G
Sbjct: 288 RSLQMRDQQQAWQESPEGRRMLEFRRSLPAYKKKEAILSVISRNQVVIISGETGCG 343
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 29/43 (67%), Gaps = 5/43 (11%)
Query: 330 NNDVI-FSLLQHI----CTTQRPGAILVFLPGWDTINSLHRSM 367
N D I FSL+++I C +RPGA+LVF+ GWD I+SL +
Sbjct: 571 NPDCIGFSLIEYILCNICENERPGAVLVFMTGWDDISSLKEKL 613
>gi|460370993|ref|XP_004231331.1| PREDICTED: ATP-dependent RNA helicase Dhx29-like [Solanum
lycopersicum]
Length = 1453
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/150 (46%), Positives = 93/150 (62%), Gaps = 11/150 (7%)
Query: 189 ILVFLPGWDTINSLHRSMCQS-SFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFLPG IN+L + S F S I+PLHS + + QK +F PPE +RK+++
Sbjct: 912 ILVFLPGVAEINTLFDRLSVSFQFSGQSSEWILPLHSSVASEDQKKVFMRPPENIRKVII 971
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR---- 303
ATNIAETSITIDD+VYVVDCGK K + ++ K ++++ +WIS ANA+Q RGRAGR
Sbjct: 972 ATNIAETSITIDDVVYVVDCGKHKENRYNPKKKLSSMVEDWISQANARQCRGRAGRVKPG 1031
Query: 304 ------TLKRSETQQYPNDVLNMLKDPELE 327
T R E P + ML+ P +E
Sbjct: 1032 ICFCLYTSYRYEKLMRPYQIPEMLRMPLVE 1061
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 32/53 (60%)
Query: 32 AFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+ KKE + + ++YQEML++R LP ++ +L + N + VI GETG G
Sbjct: 585 SLKKEQEGRKKLKKYQEMLKSRAALPIADLKGEILHSLEENDVLVICGETGCG 637
>gi|225424116|ref|XP_002280133.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Vitis
vinifera]
Length = 1195
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/170 (41%), Positives = 102/170 (60%), Gaps = 8/170 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
+LVF+ GWD I+SL + +S + ++ H + + Q+ IF+ P +GVRKIVL
Sbjct: 579 VLVFMTGWDDISSLKDKLQAHPILGDSDQVLLLTCHGSMASAEQRLIFDEPRDGVRKIVL 638
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKR 307
ATNIAETSITI+D+V+VVDCGK K +++D +N L P WIS +A+QRRGRAGR
Sbjct: 639 ATNIAETSITINDVVFVVDCGKAKETSYDALNNTPCLLPSWISKVSAQQRRGRAGRVQPG 698
Query: 308 SETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC---TTQRPGAILVFL 354
YP V + D +L +++ + LQ +C + + G+I FL
Sbjct: 699 KCYHLYPRCVYDAFADYQLP----EILRTPLQSLCLQIKSLKLGSISEFL 744
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 29/41 (70%), Gaps = 2/41 (4%)
Query: 323 DPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSL 363
+P+ G N +I +LL HIC + PGA+LVF+ GWD I+SL
Sbjct: 554 NPDCIGFN--LIENLLCHICENECPGAVLVFMTGWDDISSL 592
Score = 42.7 bits (99), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 29/43 (67%)
Query: 42 QSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+S ++MLE R LP+ + +DA+L + NQ+ ++SGETG G
Sbjct: 284 ESTEGRKMLEFRGSLPASKEKDALLTAISGNQVVIVSGETGCG 326
>gi|357521527|ref|XP_003631052.1| ATP-dependent RNA helicase A-like protein [Medicago truncatula]
gi|355525074|gb|AET05528.1| ATP-dependent RNA helicase A-like protein [Medicago truncatula]
Length = 1214
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 68/154 (44%), Positives = 92/154 (59%), Gaps = 5/154 (3%)
Query: 190 LVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
LVF+ GWD INSL + + SR ++ H + + QK IF P GVRKIVLA
Sbjct: 599 LVFMTGWDDINSLKDKLHAHPLLGDQSRVLLLACHGSMSSSEQKLIFENPGGGVRKIVLA 658
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TN+AETSITI+D+V+VVDCGK K +++D +N L P WIS A A+QR+GRAGR
Sbjct: 659 TNMAETSITINDVVFVVDCGKAKETSYDALNNTPCLLPSWISKAAARQRKGRAGRVQSGE 718
Query: 309 ETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC 342
YP V + D +L +++ + LQ +C
Sbjct: 719 CYHLYPRCVYDAFADYQLP----ELLRTPLQSLC 748
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 21/89 (23%)
Query: 47 QEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHLDFITLKRSETQQYPNDV 106
Q+MLE R+ LP+++ +DA L +V NQ+ V+SGETG G +T Q P +
Sbjct: 306 QKMLEFRRSLPAFKEKDAFLKVVSENQVIVVSGETGCG-------------KTTQLPQYI 352
Query: 107 LNMLKDPELEGVNNDVIFSLLQHICTTQR 135
L + E+E SL ICT R
Sbjct: 353 L----ESEIEAARG----SLCNIICTQPR 373
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
Query: 323 DPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSL 363
+P+ G N +I +L HI +RPGA LVF+ GWD INSL
Sbjct: 573 NPDSIGFN--LIEHVLCHIVKNERPGAALVFMTGWDDINSL 611
>gi|482559234|gb|EOA23425.1| hypothetical protein CARUB_v10016608mg [Capsella rubella]
Length = 1118
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 92/155 (59%), Gaps = 5/155 (3%)
Query: 189 ILVFLPGWDTINSLHRSM-CQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVF+ GWD I+SL + F N R ++ H + + Q+ IF P GVRKI+L
Sbjct: 506 ILVFMTGWDDISSLKEKLQIHPIFGNPDRIMLLACHGSMASFEQRLIFEEPASGVRKIIL 565
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKR 307
ATNIAETSITI+D+ +V+DCGK K +++D +N L P WIS +A+QRRGRAGR
Sbjct: 566 ATNIAETSITINDVAFVIDCGKAKETSYDALNNTPCLLPSWISKVSAQQRRGRAGRVRPG 625
Query: 308 SETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC 342
YP V + + +L +++ + LQ +C
Sbjct: 626 QCYHLYPKCVYDAFAEYQLP----EILRTPLQSLC 656
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 29/38 (76%)
Query: 47 QEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+ M+E+R+ LP+++ RD+VL + NQ+ VISGETG G
Sbjct: 216 RRMVESRRSLPAFKQRDSVLTAISKNQVIVISGETGCG 253
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Query: 323 DPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSM 367
+P+ G N +I LL HIC + PG ILVF+ GWD I+SL +
Sbjct: 481 NPDCIGFN--LIEFLLWHICENEGPGGILVFMTGWDDISSLKEKL 523
>gi|158296900|ref|XP_317231.4| AGAP008239-PA [Anopheles gambiae str. PEST]
gi|157014934|gb|EAA12366.4| AGAP008239-PA [Anopheles gambiae str. PEST]
Length = 932
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/203 (34%), Positives = 108/203 (53%), Gaps = 52/203 (25%)
Query: 101 QYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVYCTYTFMGVSPMKVFFCKN 160
+YP VL L++P E N++I LL +I ++ GA
Sbjct: 412 RYPAPVLRALQNPGSESNQNELIVELLYYITCSKPDGA---------------------- 449
Query: 161 VLQRLMKGVGANSPKRWVKLLRSMLVVPILVFLPGWDTINSLHRSMCQSSFFNSSRFQII 220
ILVFLP + I ++++ + + + +R +
Sbjct: 450 ----------------------------ILVFLPSYMQITNVYKMINEHPHLSKARLLVS 481
Query: 221 PLHSMLPTVSQKSIFNTPPEGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDN 280
PLHS LPT Q ++F+ PP+GVRKI+L+TNIAETSITIDDIVYVV+ G+ K++ ++ +
Sbjct: 482 PLHSKLPTREQTAVFDRPPDGVRKIILSTNIAETSITIDDIVYVVNAGRHKLNRYE--NG 539
Query: 281 IATLKPEWISLANAKQRRGRAGR 303
++ L+ EWIS++N QR+GRAGR
Sbjct: 540 VSVLRDEWISVSNEIQRKGRAGR 562
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 26/34 (76%)
Query: 51 EARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
E R++LP+YQ R +LDM+ NQ+ +I GETGSG
Sbjct: 171 EFRRRLPAYQSRTTILDMIERNQVILIKGETGSG 204
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 34/54 (62%)
Query: 312 QYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHR 365
+YP VL L++P E N++I LL +I ++ GAILVFLP + I ++++
Sbjct: 412 RYPAPVLRALQNPGSESNQNELIVELLYYITCSKPDGAILVFLPSYMQITNVYK 465
>gi|321474585|gb|EFX85550.1| hypothetical protein DAPPUDRAFT_98847 [Daphnia pulex]
Length = 415
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 65/147 (44%), Positives = 94/147 (63%), Gaps = 8/147 (5%)
Query: 152 PMKVFFCKNVLQRLMKGVGANSPKRWVKLLRSMLVV-----PILVFLPGWDTINSLHRSM 206
P++VF+ +++L L A P+ + L + IL+F GW+ I SL++ +
Sbjct: 194 PVQVFYLEDILSELDYRFQA--PEILIMALLKHIFAREADGAILIFFLGWEQIKSLNKLL 251
Query: 207 CQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLATNIAETSITIDDIVYVVD 266
F+S +F I LHSMLPT +Q+ +F+ PP GVRK++L+TN AETS+TIDD VYV+D
Sbjct: 252 LNDRQFSSRKFLIFTLHSMLPTFNQRQVFDKPPRGVRKLILSTNTAETSLTIDD-VYVID 310
Query: 267 CGKTKMSNFDVKDNIATLKPEWISLAN 293
CGK K+ NFD + + TL EWI+LAN
Sbjct: 311 CGKAKLPNFDPQTKLNTLNSEWITLAN 337
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 26/36 (72%)
Query: 49 MLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
ML +R LP++ ++ VL+ VR+NQ+ V+ GETG G
Sbjct: 1 MLASRVTLPAWSQKEDVLNTVRDNQVVVMCGETGCG 36
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 10/67 (14%)
Query: 313 YPNDVLNML----KDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMC 368
Y D+L+ L + PE+ +I +LL+HI + GAIL+F GW+ I SL++ +
Sbjct: 199 YLEDILSELDYRFQAPEI------LIMALLKHIFAREADGAILIFFLGWEQIKSLNKLLL 252
Query: 369 QSSFFNS 375
F+S
Sbjct: 253 NDRQFSS 259
>gi|195397459|ref|XP_002057346.1| GJ16398 [Drosophila virilis]
gi|194147113|gb|EDW62832.1| GJ16398 [Drosophila virilis]
Length = 1292
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/119 (49%), Positives = 81/119 (68%), Gaps = 2/119 (1%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF--NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIV 246
IL+FLPG+ I ++H ++ S+ F + +F ++PLHS L + Q +F P G RKIV
Sbjct: 759 ILIFLPGFQEIQTVHNALLDSAMFAPRAGKFVLVPLHSALSSEDQALVFKRAPPGKRKIV 818
Query: 247 LATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTL 305
L+TNIAETS+TIDD V+V+DCG K FD N+ +L W+S ANAKQR+GRAGR +
Sbjct: 819 LSTNIAETSVTIDDCVFVIDCGLMKEKGFDSNRNMESLDLVWVSRANAKQRKGRAGRVM 877
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 32/43 (74%)
Query: 42 QSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+ RY +++EAR+KLP++ + +L ++ +NQ+ VISGETG G
Sbjct: 443 RDERYHKLIEARRKLPAFAEMERILALIDSNQVVVISGETGCG 485
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 32/49 (65%), Gaps = 4/49 (8%)
Query: 329 VNNDVIFSLLQHICTTQ----RPGAILVFLPGWDTINSLHRSMCQSSFF 373
+N ++I S+L+HI + R G+IL+FLPG+ I ++H ++ S+ F
Sbjct: 734 INPELIESVLKHIVEGEHEWPREGSILIFLPGFQEIQTVHNALLDSAMF 782
>gi|356533151|ref|XP_003535131.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Glycine
max]
Length = 1093
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 101/170 (59%), Gaps = 8/170 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNS-SRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVF+ GWD IN+L + + SR ++ HS + ++ Q+ IF P +GVRKIVL
Sbjct: 484 ILVFMIGWDDINALKEKLLTHPVLSDPSRVLLLMCHSSMDSLEQRLIFEEPEDGVRKIVL 543
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKR 307
ATNIAETSITI+DIV+V+DCGK K S++D +N L P WIS + +QRRGRAGR
Sbjct: 544 ATNIAETSITINDIVFVLDCGKAKKSSYDALNNTPCLLPTWISKVSVQQRRGRAGRVQPG 603
Query: 308 SETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC---TTQRPGAILVFL 354
YP V + + +L +++ LQ +C + + G+I FL
Sbjct: 604 ECYHLYPRCVYDSFAEHQLP----EILRMPLQSLCLQIKSLKLGSISEFL 649
Score = 45.8 bits (107), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 7/75 (9%)
Query: 42 QSRRYQE------MLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHLDFITLK 95
Q R +QE +LE R LP+Y+ ++A+L + NQ+ +ISGETG G L L+
Sbjct: 183 QQRAWQESPEGRTILEFRSSLPAYKEKEAILSAILRNQVLIISGETGCGKTTQLPQFILE 242
Query: 96 RSETQQYPNDVLNML 110
SE + V N++
Sbjct: 243 -SEIESVRGAVCNII 256
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%), Gaps = 2/44 (4%)
Query: 324 PELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSM 367
P+ G N +I +L +IC +RPGAILVF+ GWD IN+L +
Sbjct: 460 PDCIGFN--LIQYILCNICEHERPGAILVFMIGWDDINALKEKL 501
>gi|449435206|ref|XP_004135386.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Cucumis
sativus]
Length = 1181
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 71/181 (39%), Positives = 104/181 (57%), Gaps = 8/181 (4%)
Query: 178 VKLLRSMLVVPILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFN 236
V++ S ILVF+ GWD I+SL + + +R ++ H + + Q+ IF
Sbjct: 544 VRICESETPGAILVFMTGWDDISSLKEKLQSHPLLGDPTRVMLLACHGSMASSEQRLIFT 603
Query: 237 TPPEGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQ 296
P +GVRK+VLATNIAETSITI+D+VYV+DCGK K +++D +N L P WIS +A+Q
Sbjct: 604 EPDKGVRKVVLATNIAETSITINDVVYVLDCGKAKETSYDALNNTPCLLPSWISKVSAQQ 663
Query: 297 RRGRAGRTLKRSETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC---TTQRPGAILVF 353
RRGRAGR YP V + +L +++ + LQ +C + + G+I F
Sbjct: 664 RRGRAGRVQPGECYHLYPRCVFGSFSEYQLP----EILRTPLQSLCLQIKSLKLGSISEF 719
Query: 354 L 354
L
Sbjct: 720 L 720
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 30/38 (78%)
Query: 47 QEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+E+LE R+ LP+Y+ +DA+LD + NQ+ +ISGETG G
Sbjct: 265 REILEFRRNLPAYKEKDALLDTISQNQVIIISGETGCG 302
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Query: 323 DPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSM 367
+P+ G N +I LL IC ++ PGAILVF+ GWD I+SL +
Sbjct: 530 NPDCLGFN--LIEYLLVRICESETPGAILVFMTGWDDISSLKEKL 572
>gi|485610794|gb|EOD09487.1| hypothetical protein EMIHUDRAFT_448382 [Emiliania huxleyi CCMP1516]
Length = 1513
Score = 125 bits (315), Expect = 4e-26, Method: Composition-based stats.
Identities = 71/174 (40%), Positives = 97/174 (55%), Gaps = 24/174 (13%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
+LVFLPG+ I++L+ +M S F + + F+++PLHS L Q ++F+ P GVRK+VL
Sbjct: 950 VLVFLPGFADISTLYNTMSSSRRFGDRAAFRVLPLHSSLSPAEQSAVFDVMPTGVRKVVL 1009
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR---- 303
ATNIAETSITIDD V+V+D G+ K + FD + + L WIS A A+QR GRAGR
Sbjct: 1010 ATNIAETSITIDDAVFVIDSGRAKSAMFDERKQMRRLVDVWISQAEARQRAGRAGRVRAG 1069
Query: 304 ------TLKRSETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAIL 351
T +R P V ML+ P LQ +C R +L
Sbjct: 1070 HAFKLYTRQRYTQSMLPARVPEMLRGP-------------LQELCLQLRLAPLL 1110
Score = 42.7 bits (99), Expect = 0.46, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 34/61 (55%)
Query: 313 YPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSF 372
YP V +L +N+D+I L+ +I GA+LVFLPG+ I++L+ +M S
Sbjct: 913 YPPGVHAVLSQLNESAINHDLIMELVDYIDLNLGDGAVLVFLPGFADISTLYNTMSSSRR 972
Query: 373 F 373
F
Sbjct: 973 F 973
>gi|449527633|ref|XP_004170814.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DHX36-like, partial [Cucumis sativus]
Length = 599
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 69/170 (40%), Positives = 99/170 (58%), Gaps = 8/170 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNS-SRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVF+ GWD I+SL + +R ++ H + + Q+ IF P +GVRK+VL
Sbjct: 248 ILVFMTGWDDISSLKEKLQSHPLLGDPTRVMLLACHGSMASSEQRLIFTEPDKGVRKVVL 307
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKR 307
ATNIAETSITI+D+VYV+DCGK K +++D +N L P WIS +A+QRRGRAGR
Sbjct: 308 ATNIAETSITINDVVYVLDCGKAKETSYDALNNTPCLLPSWISKVSAQQRRGRAGRVQPG 367
Query: 308 SETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC---TTQRPGAILVFL 354
YP V + +L +++ + LQ +C + + G+I FL
Sbjct: 368 ECYHLYPRCVFGSFSEYQLP----EILRTPLQSLCLQIKSLKLGSISEFL 413
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Query: 323 DPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSM 367
+P+ G N +I LL IC ++ PGAILVF+ GWD I+SL +
Sbjct: 223 NPDCLGFN--LIEYLLVRICESETPGAILVFMTGWDDISSLKEKL 265
>gi|345289955|gb|AEN81469.1| AT2G30800-like protein, partial [Capsella rubella]
gi|345289963|gb|AEN81473.1| AT2G30800-like protein, partial [Capsella rubella]
gi|345289969|gb|AEN81476.1| AT2G30800-like protein, partial [Capsella rubella]
Length = 173
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 57/105 (54%), Positives = 78/105 (74%), Gaps = 1/105 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFLPGWD IN + + ++ FF +S +F II LHSM+P QK +FN PP G RKIVL
Sbjct: 69 ILVFLPGWDDINKTRQRLLENPFFADSVKFDIICLHSMVPAGEQKKVFNRPPRGCRKIVL 128
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLA 292
ATNIAE+++TIDD+VYV+D G+ K ++D +N++TL+ W+S A
Sbjct: 129 ATNIAESAVTIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKA 173
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 32/55 (58%)
Query: 327 EGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNSCLLYEF 381
E V+ +I L++ IC GAILVFLPGWD IN + + ++ FF + ++
Sbjct: 46 EQVDVSLILQLMRKICGDSEDGAILVFLPGWDDINKTRQRLLENPFFADSVKFDI 100
>gi|326664625|ref|XP_699339.5| PREDICTED: putative ATP-dependent RNA helicase DHX30 [Danio rerio]
Length = 1173
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 59/115 (51%), Positives = 75/115 (65%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+L FLPGW I ++ + + + + S I+PLHS + Q+ +F PP G RKIVLA
Sbjct: 641 VLCFLPGWQEIKAVQQQLEEKQAYRSGSQIILPLHSSMAVSEQQVVFQRPPAGQRKIVLA 700
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITIDDIV+VVD G K N+D + ++ L WIS AN QRRGRAGR
Sbjct: 701 TNIAETSITIDDIVHVVDAGVQKEQNYDPRTKVSALNTVWISQANVTQRRGRAGR 755
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 26/44 (59%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
D++ ++ HI T PGA+L FLPGW I ++ + + + + S
Sbjct: 623 DLVADVIDHIHRTGEPGAVLCFLPGWQEIKAVQQQLEEKQAYRS 666
>gi|344288910|ref|XP_003416189.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 isoform 2
[Loxodonta africana]
Length = 1000
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/169 (43%), Positives = 97/169 (57%), Gaps = 18/169 (10%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I+SLH + F S + +F P GVRKIV+A
Sbjct: 494 ILVFLPGWDNISSLHDLLMSQVMFKSVLMCLF-----------LQVFKKTPPGVRKIVIA 542
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITIDD+VYV+D GK K ++FD ++NI+T+ EW+S ANAKQR+GRAGR
Sbjct: 543 TNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGH 602
Query: 309 ETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC---TTQRPGAILVFL 354
Y ++L D +L +++ + L+ +C R G I FL
Sbjct: 603 CYHLYNGLRASLLDDYQLP----EILRTPLEELCLQIKILRLGGIAYFL 647
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 316 DVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
DVL M+ D + V+ ++I +L++HI + GAILVFLPGWD I+SLH + F S
Sbjct: 463 DVLEMMDD---DKVDLNLIAALIRHIVLEEEDGAILVFLPGWDNISSLHDLLMSQVMFKS 519
Query: 376 CLLYEFAMVDNK 387
L+ F V K
Sbjct: 520 VLMCLFLQVFKK 531
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 38/59 (64%)
Query: 26 DPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
D LD +++ RK RY EM R+KLPS+ M+ ++ ++ N+Q+TVISGETG G
Sbjct: 180 DITLDRQLLEDLQRKKTEPRYIEMQHFREKLPSHGMQKELVSLIANHQVTVISGETGCG 238
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 376 CLLY---EFAMVDNKPKEIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHPGTTA 432
CLL+ + ++ + +E I V + + F+ A ++KELR LD+LL K+ P
Sbjct: 901 CLLFFGGDISIQKDDDQETIAVDEWIVFQSPARIAHLVKELRKELDVLLQEKIESPHPVD 960
Query: 433 WGD 435
W D
Sbjct: 961 WND 963
>gi|194762936|ref|XP_001963590.1| GF20206 [Drosophila ananassae]
gi|190629249|gb|EDV44666.1| GF20206 [Drosophila ananassae]
Length = 1289
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 60/119 (50%), Positives = 82/119 (68%), Gaps = 2/119 (1%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN--SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIV 246
IL+FLPG+ I S+H ++ ++ F+ + +F ++PLHS L + Q +F P G RKIV
Sbjct: 756 ILIFLPGFQEIQSVHDALLDNALFSPRAGKFILVPLHSALSSEDQALVFKKAPPGKRKIV 815
Query: 247 LATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTL 305
L+TNIAETS+TIDD V+VVDCG K FD N+ +L W+S ANAKQR+GRAGR +
Sbjct: 816 LSTNIAETSVTIDDCVFVVDCGLMKEKCFDSNRNMESLDLVWVSRANAKQRKGRAGRVM 874
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 34/50 (68%)
Query: 35 KEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
++ + + + RYQ++++ R+KLP++ + +L ++ + + VISGETG G
Sbjct: 433 QQFVERRKEDRYQKVIDGRRKLPAFAEIERILALIETSPVVVISGETGCG 482
>gi|224133172|ref|XP_002321501.1| predicted protein [Populus trichocarpa]
gi|222868497|gb|EEF05628.1| predicted protein [Populus trichocarpa]
Length = 1062
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 71/167 (42%), Positives = 97/167 (58%), Gaps = 2/167 (1%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNS-SRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
+LVF+ GWD INSL + R ++ H + + Q+ IF+ P +GVRKIVL
Sbjct: 445 VLVFMTGWDDINSLKDQLQAHPILGDPCRVLLLACHGSMASSEQRLIFDKPEDGVRKIVL 504
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKR 307
ATN+AETSITI+D+V+VVDCGK K +++D +N L P WIS A A+QR+GRAGR
Sbjct: 505 ATNMAETSITINDVVFVVDCGKAKETSYDALNNTPCLLPSWISKAAARQRKGRAGRVQPG 564
Query: 308 SETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFL 354
YP V + D +L + + SL I + Q G+I FL
Sbjct: 565 ECYHLYPRCVYDAFADYQLPELLRTPLQSLSLQIKSLQL-GSISEFL 610
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%)
Query: 42 QSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHL 89
+S Q+M+E R+ LP+Y+ +D +L + NQ+ V+SGETG G L
Sbjct: 148 ESPEGQKMIEFRRSLPAYKEKDVLLKAISENQVIVVSGETGCGKTTQL 195
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 28/41 (68%), Gaps = 2/41 (4%)
Query: 323 DPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSL 363
+P+ G N +I +L HI +RPGA+LVF+ GWD INSL
Sbjct: 420 NPDSIGFN--LIEHVLCHIVKKERPGAVLVFMTGWDDINSL 458
>gi|195447902|ref|XP_002071421.1| GK25787 [Drosophila willistoni]
gi|194167506|gb|EDW82407.1| GK25787 [Drosophila willistoni]
Length = 1306
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 60/119 (50%), Positives = 81/119 (68%), Gaps = 2/119 (1%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN--SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIV 246
IL+FLPG+ I ++H S+ S F+ + +F ++PLHS L Q +F P+G RKIV
Sbjct: 764 ILIFLPGFQEIQTVHDSLLDHSLFSPRAGKFVLVPLHSSLSGDDQALVFKRAPQGKRKIV 823
Query: 247 LATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTL 305
L+TNIAETS+TIDD V+V+DCG K FD N+ +L W+S ANAKQR+GRAGR +
Sbjct: 824 LSTNIAETSVTIDDCVFVIDCGLMKEKCFDSNRNMESLDLVWVSRANAKQRKGRAGRVM 882
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 15/84 (17%)
Query: 32 AFKKEMIRKLQ-------SRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
A K+E R LQ RYQ++++ RK+LP++ + +L ++ + + VISGETG G
Sbjct: 429 ALKRENRRLLQQFTERRRDERYQKVIDGRKQLPAFAEMERILALIERSPVVVISGETGCG 488
Query: 85 -----PPLHLD---FITLKRSETQ 100
P LD F +L+RS+ +
Sbjct: 489 KSTQVPQFILDNWFFQSLQRSDDK 512
>gi|24641139|ref|NP_572663.1| CG1582 [Drosophila melanogaster]
gi|21428832|gb|AAM50135.1| GH07148p [Drosophila melanogaster]
gi|22832065|gb|AAF47973.2| CG1582 [Drosophila melanogaster]
gi|220947156|gb|ACL86121.1| CG1582-PA [synthetic construct]
gi|220956700|gb|ACL90893.1| CG1582-PA [synthetic construct]
Length = 1288
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 61/119 (51%), Positives = 81/119 (68%), Gaps = 2/119 (1%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN--SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIV 246
IL+FLPG+ I S+H S+ ++ F+ + +F ++PLHS L Q +F P G RKIV
Sbjct: 755 ILIFLPGFGEIQSVHDSLLDNALFSPRAGKFILVPLHSALSGEDQALVFKKAPPGKRKIV 814
Query: 247 LATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTL 305
L+TNIAETS+TIDD V+VVDCG K FD N+ +L W+S ANAKQR+GRAGR +
Sbjct: 815 LSTNIAETSVTIDDCVFVVDCGLMKEKCFDSNRNMESLDLVWVSRANAKQRKGRAGRVM 873
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 35/50 (70%)
Query: 35 KEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
++ + + + RYQ++++ RK+LP++ + +L ++ ++ + VISGETG G
Sbjct: 432 QQFVERRKEERYQKIIDGRKQLPAFAEIERILALIESSPVVVISGETGCG 481
>gi|195350776|ref|XP_002041914.1| GM11277 [Drosophila sechellia]
gi|194123719|gb|EDW45762.1| GM11277 [Drosophila sechellia]
Length = 1271
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 61/119 (51%), Positives = 81/119 (68%), Gaps = 2/119 (1%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN--SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIV 246
IL+FLPG+ I S+H S+ ++ F+ + +F ++PLHS L Q +F P G RKIV
Sbjct: 738 ILIFLPGFGEIQSVHDSLLDNALFSPRAGKFILVPLHSALSGEDQALVFKKAPPGKRKIV 797
Query: 247 LATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTL 305
L+TNIAETS+TIDD V+VVDCG K FD N+ +L W+S ANAKQR+GRAGR +
Sbjct: 798 LSTNIAETSVTIDDCVFVVDCGLMKEKCFDSNRNMESLDLVWVSRANAKQRKGRAGRVM 856
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 35/50 (70%)
Query: 35 KEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
++ + + + RYQ++++ RK+LP++ + +L ++ ++ + VISGETG G
Sbjct: 412 QQFVERRKEERYQKIIDGRKQLPAFAEIERILALIESSPVVVISGETGCG 461
>gi|194889931|ref|XP_001977192.1| GG18891 [Drosophila erecta]
gi|190648841|gb|EDV46119.1| GG18891 [Drosophila erecta]
Length = 1288
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 60/119 (50%), Positives = 82/119 (68%), Gaps = 2/119 (1%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN--SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIV 246
IL+FLPG+ I ++H S+ ++ F+ + +F ++PLHS L + Q +F P G RKIV
Sbjct: 755 ILIFLPGFGEIQTVHDSLLDNALFSPRAGKFILVPLHSALSSEDQALVFKKAPPGKRKIV 814
Query: 247 LATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTL 305
L+TNIAETS+TIDD V+VVDCG K FD N+ +L W+S ANAKQR+GRAGR +
Sbjct: 815 LSTNIAETSVTIDDCVFVVDCGLMKEKCFDSNRNMESLDLVWVSRANAKQRKGRAGRVM 873
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 32/50 (64%)
Query: 35 KEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
++ + + + YQ++++ RK+LP++ + +L + + + VISGETG G
Sbjct: 432 QQFVERRKEESYQKIIDGRKQLPAFAEIERILAQIESAPVVVISGETGCG 481
>gi|502138161|ref|XP_004503308.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Cicer
arietinum]
Length = 1178
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 67/155 (43%), Positives = 92/155 (59%), Gaps = 5/155 (3%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
+LVF+ GWD INSL + + R ++ H + + QK IF P GVRKIVL
Sbjct: 571 VLVFMTGWDDINSLMDQLQAHPLLGDHRRVLLLACHGSMSSSEQKLIFEHPEGGVRKIVL 630
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKR 307
ATN+AETSITI+D+V+VVDCGK K +++D +N L P WIS A A+QR+GRAGR
Sbjct: 631 ATNMAETSITINDVVFVVDCGKAKETSYDALNNTPCLLPAWISKAAARQRKGRAGRVQPG 690
Query: 308 SETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC 342
YP V + D +L +++ + LQ +C
Sbjct: 691 ECYHLYPRRVYDAFADYQLP----ELLRTPLQSLC 721
Score = 45.1 bits (105), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 28/42 (66%)
Query: 48 EMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHL 89
+MLE R LP+++ +DA L +V NQ+ V+SGETG G L
Sbjct: 280 KMLEFRSSLPAFKEKDAFLKVVSENQVIVVSGETGCGKTTQL 321
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
Query: 323 DPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSL 363
+P+ G N +I +L HI +R GA+LVF+ GWD INSL
Sbjct: 546 NPDSIGFN--LIEHVLCHIVKNERAGAVLVFMTGWDDINSL 584
>gi|508705229|gb|EOX97125.1| ATP-dependent RNA helicase, putative isoform 1 [Theobroma cacao]
gi|508705230|gb|EOX97126.1| ATP-dependent RNA helicase, putative isoform 1 [Theobroma cacao]
Length = 1457
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 67/150 (44%), Positives = 93/150 (62%), Gaps = 11/150 (7%)
Query: 189 ILVFLPGWDTINSLHRSMCQS-SFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
IL+FLPG I +L + S F S ++PLHS + + QK +F PP G+RK+++
Sbjct: 917 ILIFLPGVVEIYTLLDRLAASYQFGGPSSDWLLPLHSSIASSEQKKVFLNPPNGIRKVII 976
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR---- 303
ATN+AETSITIDD+VYV+DCGK K + ++ + ++++ +WIS ANAKQRRGRAGR
Sbjct: 977 ATNVAETSITIDDVVYVIDCGKHKENRYNPQKKLSSMVEDWISRANAKQRRGRAGRVKPG 1036
Query: 304 ------TLKRSETQQYPNDVLNMLKDPELE 327
T R E P V ML+ P +E
Sbjct: 1037 ICFCLYTQHRFEKLMRPYQVPEMLRMPLVE 1066
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 35/52 (67%)
Query: 33 FKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
++E + ++++Y+EML+ R LP +++ +L +++ N + V+ GETGSG
Sbjct: 591 LRQEEENRKKTQKYKEMLKTRAALPIAGLKNDILQLLKENNVLVVCGETGSG 642
>gi|508705232|gb|EOX97128.1| ATP-dependent RNA helicase, putative isoform 4 [Theobroma cacao]
Length = 991
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 67/150 (44%), Positives = 93/150 (62%), Gaps = 11/150 (7%)
Query: 189 ILVFLPGWDTINSLHRSMCQS-SFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
IL+FLPG I +L + S F S ++PLHS + + QK +F PP G+RK+++
Sbjct: 451 ILIFLPGVVEIYTLLDRLAASYQFGGPSSDWLLPLHSSIASSEQKKVFLNPPNGIRKVII 510
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR---- 303
ATN+AETSITIDD+VYV+DCGK K + ++ + ++++ +WIS ANAKQRRGRAGR
Sbjct: 511 ATNVAETSITIDDVVYVIDCGKHKENRYNPQKKLSSMVEDWISRANAKQRRGRAGRVKPG 570
Query: 304 ------TLKRSETQQYPNDVLNMLKDPELE 327
T R E P V ML+ P +E
Sbjct: 571 ICFCLYTQHRFEKLMRPYQVPEMLRMPLVE 600
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 35/52 (67%)
Query: 33 FKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
++E + ++++Y+EML+ R LP +++ +L +++ N + V+ GETGSG
Sbjct: 125 LRQEEENRKKTQKYKEMLKTRAALPIAGLKNDILQLLKENNVLVVCGETGSG 176
>gi|508705231|gb|EOX97127.1| ATP-dependent RNA helicase, putative isoform 3 [Theobroma cacao]
Length = 1305
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 67/150 (44%), Positives = 93/150 (62%), Gaps = 11/150 (7%)
Query: 189 ILVFLPGWDTINSLHRSMCQS-SFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
IL+FLPG I +L + S F S ++PLHS + + QK +F PP G+RK+++
Sbjct: 917 ILIFLPGVVEIYTLLDRLAASYQFGGPSSDWLLPLHSSIASSEQKKVFLNPPNGIRKVII 976
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR---- 303
ATN+AETSITIDD+VYV+DCGK K + ++ + ++++ +WIS ANAKQRRGRAGR
Sbjct: 977 ATNVAETSITIDDVVYVIDCGKHKENRYNPQKKLSSMVEDWISRANAKQRRGRAGRVKPG 1036
Query: 304 ------TLKRSETQQYPNDVLNMLKDPELE 327
T R E P V ML+ P +E
Sbjct: 1037 ICFCLYTQHRFEKLMRPYQVPEMLRMPLVE 1066
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 35/52 (67%)
Query: 33 FKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
++E + ++++Y+EML+ R LP +++ +L +++ N + V+ GETGSG
Sbjct: 591 LRQEEENRKKTQKYKEMLKTRAALPIAGLKNDILQLLKENNVLVVCGETGSG 642
>gi|20197904|gb|AAM15307.1| putative RNA helicase A [Arabidopsis thaliana]
Length = 640
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/167 (41%), Positives = 94/167 (56%), Gaps = 2/167 (1%)
Query: 189 ILVFLPGWDTINSLHRSM-CQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
IL+FL GWD I+SL + F N ++ H + T Q+ IF P GVRKIVL
Sbjct: 28 ILIFLTGWDDISSLKEKLQIHPIFGNPDLVMLLACHGSMETFEQRLIFEEPASGVRKIVL 87
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKR 307
ATNIAETSITI+D+ +V+DCGK K +++D +N L P WIS +A+QRRGRAGR
Sbjct: 88 ATNIAETSITINDVAFVIDCGKAKETSYDALNNTPCLLPSWISKVSAQQRRGRAGRVRPG 147
Query: 308 SETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFL 354
YP V + + +L + + SL I + G+I FL
Sbjct: 148 QCYHLYPKCVYDAFAEYQLPEILRTPLHSLCLQI-KSLNLGSISEFL 193
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Query: 324 PELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSM 367
P+ G N +I LL +IC + PG IL+FL GWD I+SL +
Sbjct: 4 PDCIGFN--LIEFLLCNICENEGPGGILIFLTGWDDISSLKEKL 45
>gi|148707489|gb|EDL39436.1| DEAH (Asp-Glu-Ala-His) box polypeptide 9, isoform CRA_a [Mus
musculus]
Length = 1174
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 80/115 (69%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPGW+ I ++ + + +S F S R+QI+PLHS +P Q+ +F+ P+GV K++L+
Sbjct: 656 VLVFLPGWNLIYTMQKHLENNSHFGSHRYQILPLHSQIPREEQRKVFDPVPDGVTKVILS 715
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+D+VYV+D K K+ F +N+ W S N +QR+GRAGR
Sbjct: 716 TNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGR 770
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 31/44 (70%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
++I +LL++I T PGA+LVFLPGW+ I ++ + + +S F S
Sbjct: 638 ELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLENNSHFGS 681
>gi|157821633|ref|NP_001100654.1| ATP-dependent RNA helicase A [Rattus norvegicus]
gi|149058390|gb|EDM09547.1| DEAH (Asp-Glu-Ala-His) box polypeptide 9 (predicted) [Rattus
norvegicus]
Length = 1174
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 80/115 (69%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPGW+ I ++ + + +S F S R+QI+PLHS +P Q+ +F+ P+GV K++L+
Sbjct: 656 VLVFLPGWNLIYTMQKHLENNSHFGSHRYQILPLHSQIPREEQRKVFDPVPDGVTKVILS 715
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+D+VYV+D K K+ F +N+ W S N +QR+GRAGR
Sbjct: 716 TNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGR 770
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 31/44 (70%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
++I +LL++I T PGA+LVFLPGW+ I ++ + + +S F S
Sbjct: 638 ELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLENNSHFGS 681
>gi|303284421|ref|XP_003061501.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456831|gb|EEH54131.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 954
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/115 (50%), Positives = 79/115 (68%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPG I LH + + +RF +IPLHS L + Q+ F+ PP GVRKIV+A
Sbjct: 370 ILVFLPGMAEIRGLHERLVSNLDDVETRFTLIPLHSTLSSEEQRLTFSVPPPGVRKIVMA 429
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITIDD+V+V+D G+ + + +D +++L W S A+++QRRGRAGR
Sbjct: 430 TNIAETSITIDDVVFVIDAGRVRETRYDPASRMSSLVTAWCSKASSRQRRGRAGR 484
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 29/55 (52%)
Query: 313 YPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSM 367
Y + L+ + + +N ++I SL+ HI GAILVFLPG I LH +
Sbjct: 333 YSESTMRCLQTIDEDVINMELIESLIAHIADEYEDGAILVFLPGMAEIRGLHERL 387
>gi|524937369|ref|XP_005071350.1| PREDICTED: ATP-dependent RNA helicase A [Mesocricetus auratus]
Length = 1386
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 80/115 (69%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPGW+ I ++ + + +S F S R+QI+PLHS +P Q+ +F+ P+GV K++L+
Sbjct: 656 VLVFLPGWNLIYTMQKHLENNSHFGSHRYQILPLHSQIPREEQRKVFDPVPDGVTKVILS 715
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+D+VYV+D K K+ F +N+ W S N +QR+GRAGR
Sbjct: 716 TNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGR 770
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 31/44 (70%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
++I +LL++I T PGA+LVFLPGW+ I ++ + + +S F S
Sbjct: 638 ELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLENNSHFGS 681
>gi|410919035|ref|XP_003972990.1| PREDICTED: putative ATP-dependent RNA helicase DHX57-like [Takifugu
rubripes]
Length = 1420
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/118 (49%), Positives = 80/118 (67%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN---SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
+LVFLPG I L+ + + FN S R + PLHS L Q+++F+ PPEGV KI
Sbjct: 883 VLVFLPGLAEIKMLYEQLMSNRMFNNRGSKRCAVYPLHSTLSNEEQQAVFSCPPEGVTKI 942
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+++TNIAETS+TIDD+VYV+D GK K +D ++ +L+ W+S ANA QR+GRAGR
Sbjct: 943 IISTNIAETSVTIDDVVYVIDSGKMKEKRYDATKSMESLEDTWVSRANALQRKGRAGR 1000
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 42/70 (60%)
Query: 15 TSWETRQKLLNDPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQI 74
T+ + + KL N +E RKL SRR+ MLE R+KLP++Q + +L ++ +Q+
Sbjct: 534 TAHKLKLKLDNHLKESGKLCREFQRKLSSRRFTSMLEQRRKLPAWQESENILRVLEQSQV 593
Query: 75 TVISGETGSG 84
V++G TG G
Sbjct: 594 LVVTGMTGCG 603
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 20/117 (17%)
Query: 304 TLKRSETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQR---PGAILVFLPGWDTI 360
TL+ +T++ VL + +L+ +N D++ +LL+ I + PGA+LVFLPG I
Sbjct: 837 TLRYKDTKK---SVLKTIAAMDLDKINMDLVENLLEWIVDGKHDYPPGAVLVFLPGLAEI 893
Query: 361 NSLHRSMCQSSFFNS-----CLLYEF-AMVDNKPKEIITVRDCLSFECKP-STAKII 410
L+ + + FN+ C +Y + + N+ ++ + F C P KII
Sbjct: 894 KMLYEQLMSNRMFNNRGSKRCAVYPLHSTLSNEEQQAV-------FSCPPEGVTKII 943
>gi|150456419|ref|NP_031868.2| ATP-dependent RNA helicase A [Mus musculus]
Length = 1383
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 80/115 (69%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPGW+ I ++ + + +S F S R+QI+PLHS +P Q+ +F+ P+GV K++L+
Sbjct: 655 VLVFLPGWNLIYTMQKHLENNSHFGSHRYQILPLHSQIPREEQRKVFDPVPDGVTKVILS 714
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+D+VYV+D K K+ F +N+ W S N +QR+GRAGR
Sbjct: 715 TNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGR 769
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 31/44 (70%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
++I +LL++I T PGA+LVFLPGW+ I ++ + + +S F S
Sbjct: 637 ELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLENNSHFGS 680
>gi|195479567|ref|XP_002100936.1| GE17334 [Drosophila yakuba]
gi|194188460|gb|EDX02044.1| GE17334 [Drosophila yakuba]
Length = 1288
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/119 (50%), Positives = 81/119 (68%), Gaps = 2/119 (1%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN--SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIV 246
IL+FLPG+ I ++H S+ ++ F+ + +F ++PLHS L Q +F P G RKIV
Sbjct: 755 ILIFLPGFGEIQTVHDSLLDNALFSPRAGKFILVPLHSALSGEDQALVFKKAPPGKRKIV 814
Query: 247 LATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTL 305
L+TNIAETS+TIDD V+VVDCG K FD N+ +L W+S ANAKQR+GRAGR +
Sbjct: 815 LSTNIAETSVTIDDCVFVVDCGLMKEKCFDSNRNMESLDLVWVSRANAKQRKGRAGRVM 873
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 35/50 (70%)
Query: 35 KEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
++ + + + RYQ++++ RK+LP++ + +L ++ ++ + VISGETG G
Sbjct: 432 QQFVERRKEERYQKVIDGRKQLPAFAEIERILALIESSPVVVISGETGCG 481
>gi|354481448|ref|XP_003502913.1| PREDICTED: ATP-dependent RNA helicase A [Cricetulus griseus]
Length = 1311
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 80/115 (69%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPGW+ I ++ + + +S F S R+QI+PLHS +P Q+ +F+ P+GV K++L+
Sbjct: 656 VLVFLPGWNLIYTMQKHLENNSHFGSHRYQILPLHSQIPREEQRKVFDPVPDGVTKVILS 715
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+D+VYV+D K K+ F +N+ W S N +QR+GRAGR
Sbjct: 716 TNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGR 770
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 31/44 (70%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
++I +LL++I T PGA+LVFLPGW+ I ++ + + +S F S
Sbjct: 638 ELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLENNSHFGS 681
>gi|148707490|gb|EDL39437.1| DEAH (Asp-Glu-Ala-His) box polypeptide 9, isoform CRA_b [Mus
musculus]
Length = 1384
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 80/115 (69%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPGW+ I ++ + + +S F S R+QI+PLHS +P Q+ +F+ P+GV K++L+
Sbjct: 656 VLVFLPGWNLIYTMQKHLENNSHFGSHRYQILPLHSQIPREEQRKVFDPVPDGVTKVILS 715
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+D+VYV+D K K+ F +N+ W S N +QR+GRAGR
Sbjct: 716 TNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGR 770
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 31/44 (70%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
++I +LL++I T PGA+LVFLPGW+ I ++ + + +S F S
Sbjct: 638 ELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLENNSHFGS 681
>gi|2961456|gb|AAC05725.1| RNA helicase A [Mus musculus]
Length = 1380
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 80/115 (69%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPGW+ I ++ + + +S F S R+QI+PLHS +P Q+ +F+ P+GV K++L+
Sbjct: 655 VLVFLPGWNLIYTMQKHLENNSHFGSHRYQILPLHSQIPREEQRKVFDPVPDGVTKVILS 714
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+D+VYV+D K K+ F +N+ W S N +QR+GRAGR
Sbjct: 715 TNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGR 769
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 31/44 (70%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
++I +LL++I T PGA+LVFLPGW+ I ++ + + +S F S
Sbjct: 637 ELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLENNSHFGS 680
>gi|71153505|sp|O70133.2|DHX9_MOUSE RecName: Full=ATP-dependent RNA helicase A; Short=RHA; AltName:
Full=DEAH box protein 9; Short=mHEL-5; AltName:
Full=Nuclear DNA helicase II; Short=NDH II
Length = 1380
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 80/115 (69%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPGW+ I ++ + + +S F S R+QI+PLHS +P Q+ +F+ P+GV K++L+
Sbjct: 655 VLVFLPGWNLIYTMQKHLENNSHFGSHRYQILPLHSQIPREEQRKVFDPVPDGVTKVILS 714
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+D+VYV+D K K+ F +N+ W S N +QR+GRAGR
Sbjct: 715 TNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGR 769
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 31/44 (70%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
++I +LL++I T PGA+LVFLPGW+ I ++ + + +S F S
Sbjct: 637 ELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLENNSHFGS 680
>gi|153792023|ref|NP_001093309.1| MLE protein [Bombyx mori]
gi|147883246|gb|ABQ51917.1| MLE protein [Bombyx mori]
Length = 1308
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/116 (50%), Positives = 80/116 (68%), Gaps = 1/116 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNS-SRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
+LVFLPGW+ I +L + + Q F S++ I+PLHS +P QK +F TPPEG+ K++L
Sbjct: 659 VLVFLPGWNLIFALMKHLLQHRLFGDPSKYVILPLHSQIPREDQKKVFITPPEGITKVIL 718
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+TNIAETSITI+D+VYV+D K KM F +N+ + W S N +QR+GRAGR
Sbjct: 719 STNIAETSITINDVVYVIDSCKAKMKLFTSHNNMTSYATVWASKTNLEQRKGRAGR 774
Score = 38.5 bits (88), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 25/42 (59%)
Query: 43 SRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
S+ YQE L R+ LP + M+ +++ + N + +I G TG G
Sbjct: 367 SKLYQESLNEREHLPVFSMKSQIMEAINENPVIIIRGNTGCG 408
>gi|353244079|emb|CCA75534.1| related to ATP-dependent RNA helicase [Piriformospora indica DSM
11827]
Length = 1361
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 81/122 (66%), Gaps = 7/122 (5%)
Query: 189 ILVFLPGWDTINSLHRSMCQSS-------FFNSSRFQIIPLHSMLPTVSQKSIFNTPPEG 241
+LVFLPGWDTI SL +++ S F +SS++ I LHS +P Q++IF G
Sbjct: 722 VLVFLPGWDTIQSLQKTLIHSGMPLLGLNFSDSSKYSIHLLHSTVPIAEQQAIFEPAAPG 781
Query: 242 VRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRA 301
+R+I+LATNIAETS+TI D+VYVVD GK K +D + +I++L W+ +N QR GRA
Sbjct: 782 IRRIILATNIAETSVTIPDVVYVVDTGKVKEQRYDPERHISSLVSAWVGSSNLNQRAGRA 841
Query: 302 GR 303
GR
Sbjct: 842 GR 843
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 338 LQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSF 372
+ H+ G +LVFLPGWDTI SL +++ S
Sbjct: 710 IAHVLKKSEDGHVLVFLPGWDTIQSLQKTLIHSGM 744
>gi|405968436|gb|EKC33508.1| Putative ATP-dependent RNA helicase YTHDC2 [Crassostrea gigas]
Length = 1572
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/126 (47%), Positives = 86/126 (68%)
Query: 178 VKLLRSMLVVPILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNT 237
+K+L + +L+FLPG+D I +L ++ S + R+ + LHS + + QK +F +
Sbjct: 622 IKILSTSKEGAVLIFLPGYDDIVTLREAIGDSKSMDKFRYVLYTLHSSMQSNDQKRVFKS 681
Query: 238 PPEGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQR 297
P+GVRKI+LATNIAETSITI+D+VYV+D GK K FD +++ LK WIS A+A QR
Sbjct: 682 VPQGVRKIILATNIAETSITINDVVYVIDSGKVKEKAFDALLSLSMLKSTWISKASALQR 741
Query: 298 RGRAGR 303
+GRAGR
Sbjct: 742 KGRAGR 747
Score = 38.9 bits (89), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 29/42 (69%)
Query: 329 VNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQS 370
V+ ++I SL+ I +T + GA+L+FLPG+D I +L ++ S
Sbjct: 612 VDIELILSLVIKILSTSKEGAVLIFLPGYDDIVTLREAIGDS 653
>gi|521730560|gb|EPQ60643.1| P-loop containing nucleoside triphosphate hydrolase protein,
partial [Gloeophyllum trabeum ATCC 11539]
Length = 1138
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/119 (49%), Positives = 78/119 (65%), Gaps = 4/119 (3%)
Query: 189 ILVFLPGWDTINSLHRSMCQSS----FFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRK 244
+LVFLPGWD I ++ R + + + F + +F I LHS +P Q+ IF PPEGVR+
Sbjct: 532 VLVFLPGWDDIATVQRLLLEGNWPFNFMDQRKFSIHLLHSTIPLAEQEVIFEPPPEGVRR 591
Query: 245 IVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
I+LATNIAETS+TI D+VYVVD GK K +D + I +L W+ +N QR GRAGR
Sbjct: 592 IILATNIAETSVTIPDVVYVVDTGKVKEQRYDPERRITSLVSAWVGSSNLMQRAGRAGR 650
>gi|299116605|emb|CBN76232.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1170
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/106 (54%), Positives = 76/106 (71%), Gaps = 1/106 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSR-FQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
+LVFLPGWD I L + QS F+ R FQI+PLHS +PT Q+ +F PP+G RKIVL
Sbjct: 670 VLVFLPGWDDITRLGDFLRQSLHFSDERKFQILPLHSGVPTAKQRQVFVRPPKGCRKIVL 729
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLAN 293
+TNIAETSITIDD+ +V+D G+ K S++D I TL P+W+S A+
Sbjct: 730 STNIAETSITIDDVAFVIDSGRAKESSYDPHLKIKTLVPQWVSKAS 775
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 35/56 (62%), Gaps = 5/56 (8%)
Query: 34 KKEMIRKLQSRR-----YQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+ M QSRR +Q M R+ LP+++ RD +++MVR++Q ++SGETG G
Sbjct: 208 RTSMYNAAQSRRQRAAGHQRMSAFRQGLPAWEYRDTIVNMVRDHQACLVSGETGCG 263
Score = 43.1 bits (100), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 327 EGVNNDVIFSLLQHIC-TTQRPGAILVFLPGWDTINSLHRSMCQSSFFN 374
E V+ +++ LL++IC + GA+LVFLPGWD I L + QS F+
Sbjct: 646 EAVDYELVECLLRYICRSAYEDGAVLVFLPGWDDITRLGDFLRQSLHFS 694
>gi|260830294|ref|XP_002610096.1| hypothetical protein BRAFLDRAFT_125653 [Branchiostoma floridae]
gi|229295459|gb|EEN66106.1| hypothetical protein BRAFLDRAFT_125653 [Branchiostoma floridae]
Length = 937
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/118 (51%), Positives = 79/118 (66%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSS---RFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
+LVFLPG I SL+ + SS F S +F IIPLHS L + Q+ +F P EG KI
Sbjct: 603 VLVFLPGLAEITSLYEQLQSSSVFGSRSKRKFNIIPLHSSLSSEDQQKVFYKPKEGTTKI 662
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
VL+TNIAETSITIDD+V+V+D G+ K +D + +L+ W+S ANA QR+GRAGR
Sbjct: 663 VLSTNIAETSITIDDVVFVIDAGRMKEKRYDHTKGMESLEVTWVSKANALQRKGRAGR 720
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 8/66 (12%)
Query: 27 PVLDAAFKKEMIRKLQSR--------RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVIS 78
PV D + RKL+ R Y+ ML RKKLP++ +D +L + +NQ+ V+S
Sbjct: 259 PVKDLHVVRSENRKLKDRFKKKQTTSAYRSMLGERKKLPAWNEQDNILKALNDNQVLVVS 318
Query: 79 GETGSG 84
G TG G
Sbjct: 319 GMTGCG 324
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 317 VLNMLKDPELEGVNNDVIFSLLQHICTTQ----RPGAILVFLPGWDTINSLHRSMCQSSF 372
V+ L + E +NND++ +LL+ I + GA+LVFLPG I SL+ + SS
Sbjct: 566 VVKTLATMDFEKINNDLMEALLEWIVMGNHQYPKDGAVLVFLPGLAEITSLYEQLQSSSV 625
Query: 373 FNSCLLYEFAMV 384
F S +F ++
Sbjct: 626 FGSRSKRKFNII 637
>gi|357167590|ref|XP_003581237.1| PREDICTED: ATP-dependent RNA helicase Dhx29-like [Brachypodium
distachyon]
Length = 1418
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/147 (46%), Positives = 90/147 (61%), Gaps = 11/147 (7%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNS-SRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
+LVFLPG I L + S F S I+PLHSML Q+ +F +PPE +RK++L
Sbjct: 875 VLVFLPGVAEIEMLIDRLSASVRFKGVSSDWILPLHSMLSPTDQRKVFQSPPENIRKVIL 934
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR---- 303
AT+IAETSITIDD+VYVVD GK K + ++ + ++++ +WIS ANAKQRRGRAGR
Sbjct: 935 ATDIAETSITIDDVVYVVDTGKHKENRYNPQKKMSSIVEDWISRANAKQRRGRAGRVRPG 994
Query: 304 ------TLKRSETQQYPNDVLNMLKDP 324
T R E P V ML+ P
Sbjct: 995 LCFCLYTQHRFEKLMRPFQVPEMLRMP 1021
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 13/86 (15%)
Query: 32 AFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHLDF 91
A KK++ K++ +Y +ML+AR LP +++ L +++ N + V+SGETG G
Sbjct: 546 ALKKQLEHKIKLPKYLKMLQARASLPIARLKKHFLQLLKENDVIVVSGETGCG------- 598
Query: 92 ITLKRSETQQYPNDVLNMLKDPELEG 117
+T Q P +L+ + + EL G
Sbjct: 599 ------KTTQVPQFILDDMIESELGG 618
>gi|79548544|ref|NP_178223.2| DEA(D/H)-box RNA helicase family protein [Arabidopsis thaliana]
gi|330250311|gb|AEC05405.1| DEA(D/H)-box RNA helicase family protein [Arabidopsis thaliana]
Length = 1113
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/167 (41%), Positives = 94/167 (56%), Gaps = 2/167 (1%)
Query: 189 ILVFLPGWDTINSLHRSM-CQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
IL+FL GWD I+SL + F N ++ H + T Q+ IF P GVRKIVL
Sbjct: 501 ILIFLTGWDDISSLKEKLQIHPIFGNPDLVMLLACHGSMETFEQRLIFEEPASGVRKIVL 560
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKR 307
ATNIAETSITI+D+ +V+DCGK K +++D +N L P WIS +A+QRRGRAGR
Sbjct: 561 ATNIAETSITINDVAFVIDCGKAKETSYDALNNTPCLLPSWISKVSAQQRRGRAGRVRPG 620
Query: 308 SETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFL 354
YP V + + +L + + SL I + G+I FL
Sbjct: 621 QCYHLYPKCVYDAFAEYQLPEILRTPLHSLCLQIKSLNL-GSISEFL 666
Score = 45.1 bits (105), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 27/38 (71%)
Query: 47 QEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
Q ML++R LP+++ R +VL + NQ+ VISGETG G
Sbjct: 211 QRMLDSRTSLPAFKQRHSVLTAISQNQVIVISGETGCG 248
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Query: 324 PELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSM 367
P+ G N +I LL +IC + PG IL+FL GWD I+SL +
Sbjct: 477 PDCIGFN--LIEFLLCNICENEGPGGILIFLTGWDDISSLKEKL 518
>gi|20197581|gb|AAD14515.3| putative RNA helicase A [Arabidopsis thaliana]
Length = 749
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 88/154 (57%), Gaps = 1/154 (0%)
Query: 189 ILVFLPGWDTINSLHRSM-CQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
IL+FL GWD I+SL + F N ++ H + T Q+ IF P GVRKIVL
Sbjct: 500 ILIFLTGWDDISSLKEKLQIHPIFGNPDLVMLLACHGSMETFEQRLIFEEPASGVRKIVL 559
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKR 307
ATNIAETSITI+D+ +V+DCGK K +++D +N L P WIS +A+QRRGRAGR
Sbjct: 560 ATNIAETSITINDVAFVIDCGKAKETSYDALNNTPCLLPSWISKVSAQQRRGRAGRVRPG 619
Query: 308 SETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHI 341
YP V + + +L + + SL I
Sbjct: 620 QCYHLYPKCVYDAFAEYQLPEILRTPLHSLCLQI 653
Score = 45.1 bits (105), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 27/38 (71%)
Query: 47 QEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
Q ML++R LP+++ R +VL + NQ+ VISGETG G
Sbjct: 210 QRMLDSRTSLPAFKQRHSVLTAISQNQVIVISGETGCG 247
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Query: 324 PELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSM 367
P+ G N +I LL +IC + PG IL+FL GWD I+SL +
Sbjct: 476 PDCIGFN--LIEFLLCNICENEGPGGILIFLTGWDDISSLKEKL 517
>gi|218675672|gb|AAI69285.2| DEAH (Asp-Glu-Ala-His) box polypeptide 9 [synthetic construct]
Length = 525
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 80/115 (69%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPGW+ I ++ + + +S F S R+QI+PLHS +P Q+ +F+ P+GV K++L+
Sbjct: 244 VLVFLPGWNLIYTMQKHLENNSHFGSHRYQILPLHSQIPREEQRKVFDPVPDGVTKVILS 303
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+D+VYV+D K K+ F +N+ W S N +QR+GRAGR
Sbjct: 304 TNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGR 358
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 31/44 (70%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
++I +LL++I T PGA+LVFLPGW+ I ++ + + +S F S
Sbjct: 226 ELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLENNSHFGS 269
>gi|475610804|gb|EMT27855.1| ATP-dependent RNA helicase Dhx29 [Aegilops tauschii]
Length = 755
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 82/117 (70%), Gaps = 1/117 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQS-SFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
+LVFLPG I L + S F +S I+PLHSML Q+ +F +PPE +RK++L
Sbjct: 235 VLVFLPGVAEIEMLIDRLSASVRFKGASSDWILPLHSMLSPTDQRKVFQSPPENIRKVIL 294
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT 304
AT+IAETSITIDD+VYVVD GK K + ++ + ++++ +WIS ANAKQRRGRAGR
Sbjct: 295 ATDIAETSITIDDVVYVVDTGKHKENRYNPQKKMSSIVEDWISRANAKQRRGRAGRV 351
>gi|525029138|ref|XP_005061976.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like
[Ficedula albicollis]
Length = 1372
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/118 (51%), Positives = 83/118 (70%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLH-RSMCQSSFF--NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
IL+FLPG+D I SL R + F N++R+Q+ LHS + T+ QK + TPP G+RKI
Sbjct: 569 ILIFLPGYDEIVSLRDRILFDDKRFADNANRYQVFLLHSSVQTLDQKKVLETPPSGIRKI 628
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+L+TNIAETSIT++D+V+V+D GK K +FD + LK WIS A+A QR+GRAGR
Sbjct: 629 ILSTNIAETSITVNDVVFVIDSGKVKEKSFDALSRVTMLKMGWISKASAVQRKGRAGR 686
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 25/37 (67%)
Query: 327 EGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSL 363
E V+ D+I LL IC + GAIL+FLPG+D I SL
Sbjct: 546 EKVDLDLIMHLLNSICHSCDAGAILIFLPGYDEIVSL 582
>gi|499020201|ref|XP_004560883.1| PREDICTED: putative ATP-dependent RNA helicase DHX57-like [Maylandia
zebra]
Length = 1431
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/118 (50%), Positives = 81/118 (68%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN---SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
+LVFLPG I L+ + + FN +SR + PLHS L Q+++F+ PP+GV KI
Sbjct: 894 VLVFLPGLAEIKMLYEQLQSNRMFNNRGASRCVVYPLHSTLSNEEQQAVFSRPPDGVTKI 953
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+++TNIAETS+TIDD+VYV+D GK K +D ++ +L+ WIS ANA QRRGRAGR
Sbjct: 954 IISTNIAETSVTIDDVVYVIDSGKMKEKRYDSSKSMESLEDTWISQANALQRRGRAGR 1011
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 94/399 (23%), Positives = 154/399 (38%), Gaps = 89/399 (22%)
Query: 35 KEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHLDFITL 94
KE RK SRRY MLE RK LP++Q ++ +LD++ Q+ VISG TG G
Sbjct: 565 KEFSRKQSSRRYSSMLEQRKNLPAWQEKEHILDVLDQCQVLVISGMTGCG---------- 614
Query: 95 KRSETQQYPNDVLNMLKDPELEGVNNDVIFS--LLQHICTTQRPGAILVYCTYTFMG--- 149
+T Q P +L+ E V N + + + QR C +G
Sbjct: 615 ---KTTQVPQFILDASLSGPAEQVANIICTQPRRISAMSVAQRVAQERAECLGNSVGYQI 671
Query: 150 ------VSPMKVFFC-KNVLQRLMKGVGANSPKRWVKLLRSMLVVPILVFLPGWDTINSL 202
S ++ +C VL R ++G LR + V ++ +
Sbjct: 672 RLESVRTSVTRLLYCTTGVLLRRLEGEAD---------LRGVTHV----------IVDEV 712
Query: 203 HRSMCQSSFF---------NSSRFQIIPLHSML-PTVSQKSIFNTPPEG-------VRKI 245
H +S F +II + + L + +N P V +
Sbjct: 713 HERTEESDFLLLVLKDLMVQRPDLKIILMSATLNANLFSDYFYNCPTIHIPGRTFPVDQF 772
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVK---------DNIATLKPEWISLANA-- 294
L IA T I+D + GK S + D+++ ++S N
Sbjct: 773 FLEDAIANTRYVIEDGSPYMRSGKQNQSTTGARSRGDPSCVVDDLSEDVWNFMSFCNKDF 832
Query: 295 ------KQRRGRAGRTLKRSETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQR-- 346
Q+ T++ +T++ VL + +L+ +N D++ SLL+ I +
Sbjct: 833 VKDSVPDQQLSLQDLTIRYKDTKK---SVLKTIATMDLDKINMDLVESLLEWIVEGKHNY 889
Query: 347 -PGAILVFLPGWDTINSLHRSMCQSSFFNS-----CLLY 379
PGA+LVFLPG I L+ + + FN+ C++Y
Sbjct: 890 PPGAVLVFLPGLAEIKMLYEQLQSNRMFNNRGASRCVVY 928
>gi|432942211|ref|XP_004082987.1| PREDICTED: putative ATP-dependent RNA helicase DHX57-like [Oryzias
latipes]
Length = 1407
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/118 (49%), Positives = 81/118 (68%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN---SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
+LVFLPG I L+ + + FN +SR + PLHS L Q+++F+ PPEGV KI
Sbjct: 870 VLVFLPGLAEIKMLYEQLQSNRMFNNRGASRCVVYPLHSTLSNDEQQAVFSRPPEGVTKI 929
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+++TNIAETS+TIDD+VYV+D GK K +D ++ +L+ W+S ANA QR+GRAGR
Sbjct: 930 IISTNIAETSVTIDDVVYVIDSGKMKEKRYDAAKSMESLEDTWVSRANALQRKGRAGR 987
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 94/407 (23%), Positives = 172/407 (42%), Gaps = 76/407 (18%)
Query: 21 QKLLNDPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGE 80
QK+ N + +++ RK SRR++ MLE RK LP++Q RD +L+ + +Q+ V+SG
Sbjct: 526 QKIDNLLAENGKLQRDFRRKQSSRRFKAMLEHRKNLPAWQERDNILEELNRSQVLVVSGM 585
Query: 81 TGSGPPLHLDFITLKRSETQQYPNDVLNMLKDPELEGVNNDV--------IFSLLQHICT 132
TG G +T Q P +L+ + E V N V ++ Q +
Sbjct: 586 TGCG-------------KTTQIPQFILDASLEGSAERVANIVCTQPRRISAITVAQRVA- 631
Query: 133 TQRPGAILVYCTYTF----MGVSPMKVFFCKN--VLQRL-----MKGVG---ANSPKRWV 178
+R ++ + Y + S ++ +C +L+RL +KGV +
Sbjct: 632 QERAESLGLSVGYQIRLESVKSSATRLLYCTAGLLLRRLEGDADLKGVSHVIVDEVHERT 691
Query: 179 KLLRSMLVVPILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTP 238
+ +L+V + D L + ++ F+ + +H +P T
Sbjct: 692 EESDFLLLVLKDLITKRPDLKIVLMSATLNANLFSQYFYDCPTVH--IPG-------RTF 742
Query: 239 PEGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNF------------------DVKDN 280
P V + L IA+T I+D + GK S+ DV +
Sbjct: 743 P--VDQFFLEDAIAKTGYVIEDGSPYMRSGKQNTSSATGKAAKGERRDVVDGLGEDVWNF 800
Query: 281 IATLKPEWISLANAKQRRGRAGRTLKRSETQQYPNDVLNMLKDPELEGVNNDVIFSLLQH 340
++ K +++ + Q+ T++ +T++ VL + +L+ +N D++ SLL+
Sbjct: 801 MSLCKKDFVKDSIPDQQLSLQELTVRYKDTKK---SVLKTIAAMDLDKINMDLVESLLEW 857
Query: 341 ICTTQR---PGAILVFLPGWDTINSLHRSMCQSSFFNS-----CLLY 379
I + PGA+LVFLPG I L+ + + FN+ C++Y
Sbjct: 858 IVDGKHNYPPGAVLVFLPGLAEIKMLYEQLQSNRMFNNRGASRCVVY 904
>gi|195119115|ref|XP_002004077.1| GI19576 [Drosophila mojavensis]
gi|193914652|gb|EDW13519.1| GI19576 [Drosophila mojavensis]
Length = 934
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/119 (47%), Positives = 88/119 (73%), Gaps = 4/119 (3%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQ----IIPLHSMLPTVSQKSIFNTPPEGVRK 244
ILVF+PG+ I+ LH ++ R++ I PLHSMLP+V Q+S+F P+G RK
Sbjct: 416 ILVFVPGFSKISQLHNTLKNPRSPLGQRWRNHLLIFPLHSMLPSVEQQSVFRPAPKGKRK 475
Query: 245 IVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
++++T IAETS+TIDD+VYV++ G+TK++++D++ NI +L+ W++ AN +QR+GRAGR
Sbjct: 476 VIISTIIAETSVTIDDVVYVINTGRTKVTDYDIETNIQSLEECWVTHANTQQRKGRAGR 534
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 307 RSETQQYPNDVLNMLKDPELEGVNN-DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHR 365
R +Y VL L+ P EG + + I SL+ +IC + GAILVF+PG+ I+ LH
Sbjct: 372 RQVRDRYDTKVLEQLRVPHSEGCEDIEFIASLIYYICNNKSDGAILVFVPGFSKISQLHN 431
Query: 366 SM 367
++
Sbjct: 432 TL 433
>gi|195430156|ref|XP_002063122.1| GK21754 [Drosophila willistoni]
gi|194159207|gb|EDW74108.1| GK21754 [Drosophila willistoni]
Length = 1401
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/115 (50%), Positives = 79/115 (68%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGW+ I +L + + S F SSR++I+P HS +P Q+ +F P+GV KI+L+
Sbjct: 670 ILVFLPGWNLIFALMKFLQNSQHFGSSRYRILPCHSQIPRDDQRKVFEPVPDGVTKIILS 729
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITIDDIV+V+D K +M F +N+ + W S N +QR+GRAGR
Sbjct: 730 TNIAETSITIDDIVFVIDICKARMKLFTSHNNLTSYATVWASKTNMEQRKGRAGR 784
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 31/49 (63%), Gaps = 4/49 (8%)
Query: 331 NDVIFSLLQ----HICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
+DV F LL+ HI + + PGAILVFLPGW+ I +L + + S F S
Sbjct: 647 SDVSFELLECLLMHIKSKEIPGAILVFLPGWNLIFALMKFLQNSQHFGS 695
>gi|195351923|ref|XP_002042465.1| GM23309 [Drosophila sechellia]
gi|194124334|gb|EDW46377.1| GM23309 [Drosophila sechellia]
Length = 939
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 107/208 (51%), Gaps = 55/208 (26%)
Query: 102 YPNDVLNMLKDPELEGVNN-DVIFSLLQHICTTQRPGAILVYCTYTFMGVSPMKVFFCKN 160
Y N VL+ L+ PE EG + D I L+ +IC + GA
Sbjct: 384 YDNRVLDKLRLPESEGCEDIDFIADLVYYICENEPEGA---------------------- 421
Query: 161 VLQRLMKGVGANSPKRWVKLLRSMLVVPILVFLPGWDTINSLHRSMCQSSFFNSSRFQ-- 218
ILVFLPG+D I+ L+ + + R++
Sbjct: 422 ----------------------------ILVFLPGYDKISQLYNILDKPKTPKGQRWRDH 453
Query: 219 --IIPLHSMLPTVSQKSIFNTPPEGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFD 276
+ PLHS++ + Q+++F PP G RK++++T IAETS+TIDD+VYV++ G+TK +N+D
Sbjct: 454 MAVFPLHSLMQSGEQQAVFRRPPAGQRKVIISTIIAETSVTIDDVVYVINSGRTKATNYD 513
Query: 277 VKDNIATLKPEWISLANAKQRRGRAGRT 304
++ NI +L W++ AN +QR+GRAGR
Sbjct: 514 IETNIQSLDEVWVTKANTQQRKGRAGRV 541
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 313 YPNDVLNMLKDPELEGVNN-DVIFSLLQHICTTQRPGAILVFLPGWDTINSLH 364
Y N VL+ L+ PE EG + D I L+ +IC + GAILVFLPG+D I+ L+
Sbjct: 384 YDNRVLDKLRLPESEGCEDIDFIADLVYYICENEPEGAILVFLPGYDKISQLY 436
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 18 ETRQKLLN----DPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQ 73
ET+++ N +P LD + E+ + ++ L AR+KLP+ + D ++ VR NQ
Sbjct: 108 ETKERNANLDWINPKLDERLQLELEQSQLEENAKKRLAARRKLPTMKYADNIIHAVRENQ 167
Query: 74 ITVISGETGSG 84
+ +I G TG G
Sbjct: 168 VILIVGSTGCG 178
>gi|195165162|ref|XP_002023408.1| GL20210 [Drosophila persimilis]
gi|194105513|gb|EDW27556.1| GL20210 [Drosophila persimilis]
Length = 1223
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/119 (50%), Positives = 79/119 (66%), Gaps = 2/119 (1%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN--SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIV 246
IL+FLPG I ++H ++ S F+ + +F ++PLHS L Q +F P G RKIV
Sbjct: 690 ILIFLPGMHEIQTVHDALLDHSLFSPRAGKFVLVPLHSALSGEDQALVFKRAPAGKRKIV 749
Query: 247 LATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTL 305
L+TNIAETS+TIDD V+VVDCG K FD N+ +L W+S ANAKQR+GRAGR +
Sbjct: 750 LSTNIAETSVTIDDCVFVVDCGLMKEKCFDSNRNMESLDLVWVSRANAKQRKGRAGRVM 808
Score = 45.1 bits (105), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 35/50 (70%)
Query: 35 KEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
++ + + + RYQ+++E R++LP++ + +L ++ ++ + VISGETG G
Sbjct: 367 QQFVERRKDERYQKVIEGRRQLPAFAEIERILALIESSPVVVISGETGCG 416
>gi|195580493|ref|XP_002080070.1| GD21681 [Drosophila simulans]
gi|194192079|gb|EDX05655.1| GD21681 [Drosophila simulans]
Length = 939
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 107/207 (51%), Gaps = 55/207 (26%)
Query: 102 YPNDVLNMLKDPELEGVNN-DVIFSLLQHICTTQRPGAILVYCTYTFMGVSPMKVFFCKN 160
Y N VL+ L+ PE EG + D I L+ +IC + GA
Sbjct: 384 YDNRVLDKLRLPESEGCEDIDFIADLVYYICENEPEGA---------------------- 421
Query: 161 VLQRLMKGVGANSPKRWVKLLRSMLVVPILVFLPGWDTINSLHRSMCQSSFFNSSRFQ-- 218
ILVFLPG+D I+ L+ + + R++
Sbjct: 422 ----------------------------ILVFLPGYDKISQLYNILDKPKTPKGQRWRDH 453
Query: 219 --IIPLHSMLPTVSQKSIFNTPPEGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFD 276
+ PLHS++ + Q+++F PP G RK++++T IAETS+TIDD+VYV++ G+TK +N+D
Sbjct: 454 MAVFPLHSLMQSGEQQAVFRRPPAGQRKVIISTIIAETSVTIDDVVYVINSGRTKATNYD 513
Query: 277 VKDNIATLKPEWISLANAKQRRGRAGR 303
++ NI +L W++ AN +QR+GRAGR
Sbjct: 514 IETNIQSLDEVWVTKANTQQRKGRAGR 540
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 313 YPNDVLNMLKDPELEGVNN-DVIFSLLQHICTTQRPGAILVFLPGWDTINSLH 364
Y N VL+ L+ PE EG + D I L+ +IC + GAILVFLPG+D I+ L+
Sbjct: 384 YDNRVLDKLRLPESEGCEDIDFIADLVYYICENEPEGAILVFLPGYDKISQLY 436
Score = 42.0 bits (97), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 18 ETRQKLLN----DPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQ 73
ET+++ N +P LD + E+ ++ ++ L AR+KLP+ + D ++ VR NQ
Sbjct: 108 ETKERNANLDWINPKLDERLQLELEQRQLEENAKKRLVARRKLPTMKYADDIIQAVRENQ 167
Query: 74 ITVISGETGSG 84
+ +I G TG G
Sbjct: 168 VILIVGSTGCG 178
>gi|403420397|emb|CCM07097.1| predicted protein [Fibroporia radiculosa]
Length = 1424
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/120 (47%), Positives = 84/120 (70%), Gaps = 5/120 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQS-----SFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVR 243
+LVFLPGWD I ++ R + + +F +S +F+I LHS +P V Q++IF+ PP+G+R
Sbjct: 801 VLVFLPGWDDIIAVQRFLREKELLGLNFNDSDKFRIHLLHSTIPVVEQQAIFDPPPQGIR 860
Query: 244 KIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+I+LATNIAETS+TI D+VYVVD + K +D + +I++L W+ +N QR GRAGR
Sbjct: 861 RIILATNIAETSVTIPDVVYVVDSARVKEQRYDPERHISSLVSAWVGKSNLNQRAGRAGR 920
>gi|297817698|ref|XP_002876732.1| ATP binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297322570|gb|EFH52991.1| ATP binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 1120
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/116 (50%), Positives = 77/116 (66%), Gaps = 1/116 (0%)
Query: 189 ILVFLPGWDTINSLHRSM-CQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVF+ GWD I+SL + F N R ++ H + + Q+ IF P GVRKIVL
Sbjct: 508 ILVFMTGWDDISSLKEKLQIHPIFGNPDRVMLLACHGSMASFEQRLIFEEPASGVRKIVL 567
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
ATNIAETSITI+D+ +V+DCGK K +++D +N L P WIS +A+QRRGRAGR
Sbjct: 568 ATNIAETSITINDVAFVIDCGKAKETSYDALNNTPCLLPSWISKVSAQQRRGRAGR 623
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 28/38 (73%)
Query: 47 QEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+ M+E+R LP+++ RD+VL + NQ+ VISGETG G
Sbjct: 218 RRMVESRTSLPAFKQRDSVLTAISQNQVIVISGETGCG 255
Score = 43.5 bits (101), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Query: 323 DPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSM 367
+P+ G N +I LL HIC + PG ILVF+ GWD I+SL +
Sbjct: 483 NPDCIGFN--LIEFLLCHICENEGPGGILVFMTGWDDISSLKEKL 525
>gi|198468584|ref|XP_001354748.2| GA13970 [Drosophila pseudoobscura pseudoobscura]
gi|198146476|gb|EAL31803.2| GA13970 [Drosophila pseudoobscura pseudoobscura]
Length = 1289
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/119 (50%), Positives = 79/119 (66%), Gaps = 2/119 (1%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN--SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIV 246
IL+FLPG I ++H ++ S F+ + +F ++PLHS L Q +F P G RKIV
Sbjct: 756 ILIFLPGMHEIQTVHDALLDHSLFSPRAGKFVLVPLHSALSGEDQALVFKRAPAGKRKIV 815
Query: 247 LATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTL 305
L+TNIAETS+TIDD V+VVDCG K FD N+ +L W+S ANAKQR+GRAGR +
Sbjct: 816 LSTNIAETSVTIDDCVFVVDCGLMKEKCFDSNRNMESLDLVWVSRANAKQRKGRAGRVM 874
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 36/50 (72%)
Query: 35 KEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
++ + + + RYQ+++E R++LP++ +++L ++ ++ + VISGETG G
Sbjct: 433 QQFVERRKDERYQKVIEGRRQLPAFAEIESILALIESSPVVVISGETGCG 482
>gi|195155374|ref|XP_002018580.1| GL17788 [Drosophila persimilis]
gi|194114376|gb|EDW36419.1| GL17788 [Drosophila persimilis]
Length = 1318
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/115 (50%), Positives = 80/115 (69%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGW+ I +L + + S+ FNS +++I+P HS +P Q+ +F PEGV KI+L+
Sbjct: 655 ILVFLPGWNLIFALMKFLQTSNHFNSPKYRILPCHSQIPRDDQRKVFEPVPEGVTKIILS 714
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITIDDIV+V+D K +M F +N+ + W S N +QR+GRAGR
Sbjct: 715 TNIAETSITIDDIVFVIDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGR 769
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 39/64 (60%), Gaps = 3/64 (4%)
Query: 312 QYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSS 371
Q + ML + + V+ ++I SLL HI + PGAILVFLPGW+ I +L + + S+
Sbjct: 620 QQTRTAMGMLSESD---VSFELIESLLLHIKSKNIPGAILVFLPGWNLIFALMKFLQTSN 676
Query: 372 FFNS 375
FNS
Sbjct: 677 HFNS 680
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 24 LNDPVLDAAFKKEMI-RKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETG 82
++D LD F++ ++ R+ YQ+ L+ R KLP MR +L + +N + +I G TG
Sbjct: 351 IDDLSLD--FERSILDRRHNDSEYQQFLDFRDKLPIAAMRSEILSAINDNPVVIIRGNTG 408
Query: 83 SG 84
G
Sbjct: 409 CG 410
>gi|2465310|gb|AAB72087.1| DNA helicase II [Mus musculus]
Length = 534
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 55/116 (47%), Positives = 80/116 (68%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPGW+ I ++ + + +S F S R+QI+PLHS +P Q+ +F+ P+GV K++L+
Sbjct: 270 VLVFLPGWNLIYTMQKHLEMNSHFGSHRYQILPLHSQIPREEQRKVFDPVPDGVTKVILS 329
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT 304
TNIAETSITI+D+VYV+D K K+ F +N+ W S N +QR+GRAGR
Sbjct: 330 TNIAETSITINDVVYVIDSCKQKVKLFTAHNNMINYATVWASKTNLEQRKGRAGRV 385
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 31/44 (70%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
++I +LL++I T PGA+LVFLPGW+ I ++ + + +S F S
Sbjct: 252 ELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNSHFGS 295
>gi|24585491|ref|NP_610056.1| CG9323, isoform A [Drosophila melanogaster]
gi|442628640|ref|NP_001260639.1| CG9323, isoform B [Drosophila melanogaster]
gi|20177015|gb|AAM12269.1| GH12763p [Drosophila melanogaster]
gi|22946936|gb|AAF53921.2| CG9323, isoform A [Drosophila melanogaster]
gi|220947090|gb|ACL86088.1| CG9323-PA [synthetic construct]
gi|220956666|gb|ACL90876.1| CG9323-PA [synthetic construct]
gi|440214005|gb|AGB93174.1| CG9323, isoform B [Drosophila melanogaster]
Length = 942
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 107/207 (51%), Gaps = 55/207 (26%)
Query: 102 YPNDVLNMLKDPELEGVNN-DVIFSLLQHICTTQRPGAILVYCTYTFMGVSPMKVFFCKN 160
Y + VL+ L+ PE EG + D I L+ +IC + GA
Sbjct: 387 YDSRVLDKLRLPESEGCEDIDFIADLVYYICENEPEGA---------------------- 424
Query: 161 VLQRLMKGVGANSPKRWVKLLRSMLVVPILVFLPGWDTINSLHRSMCQSSFFNSSRFQ-- 218
ILVFLPG+D I+ L+ + + R++
Sbjct: 425 ----------------------------ILVFLPGYDKISQLYNILDKPKTSKGQRWRDH 456
Query: 219 --IIPLHSMLPTVSQKSIFNTPPEGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFD 276
+ PLHS++ + Q+++F PP G RK++++T IAETS+TIDD+VYV++ G+TK +N+D
Sbjct: 457 MAVFPLHSLMQSGEQQAVFRRPPAGQRKVIISTIIAETSVTIDDVVYVINSGRTKATNYD 516
Query: 277 VKDNIATLKPEWISLANAKQRRGRAGR 303
++ NI +L W++ AN +QRRGRAGR
Sbjct: 517 IETNIQSLDEVWVTKANTQQRRGRAGR 543
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 313 YPNDVLNMLKDPELEGVNN-DVIFSLLQHICTTQRPGAILVFLPGWDTINSLH 364
Y + VL+ L+ PE EG + D I L+ +IC + GAILVFLPG+D I+ L+
Sbjct: 387 YDSRVLDKLRLPESEGCEDIDFIADLVYYICENEPEGAILVFLPGYDKISQLY 439
Score = 45.4 bits (106), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 35/59 (59%)
Query: 26 DPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+P LD + E+ ++ ++ LEARKKLP+ + D ++ VR NQ+ +I G TG G
Sbjct: 123 NPKLDERLQLELGQRQLEENAKKRLEARKKLPTMKYADDIIQAVRENQVILIVGSTGCG 181
>gi|513231284|ref|XP_004949328.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2 isoform X5
[Gallus gallus]
Length = 1446
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/118 (52%), Positives = 83/118 (70%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLH-RSMCQSSFF--NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
IL+FLPG+D I SL R + F N+ R+Q+ LHS + T+ QK++ TPP G+RKI
Sbjct: 636 ILIFLPGYDEIISLRDRIIFDDKRFVDNAHRYQVFMLHSNMQTLDQKNVLKTPPSGIRKI 695
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+L+TNIAETSIT++D+V+V+D GK K +FD + LK WIS A+A QRRGRAGR
Sbjct: 696 ILSTNIAETSITVNDVVFVIDSGKMKEKSFDALSCVTMLKTVWISKASAIQRRGRAGR 753
Score = 42.7 bits (99), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 26/37 (70%)
Query: 327 EGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSL 363
E V+ D+I LL +IC + GAIL+FLPG+D I SL
Sbjct: 613 EKVDLDLIMHLLYNICNSSDGGAILIFLPGYDEIISL 649
>gi|513231279|ref|XP_004949327.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2 isoform X4
[Gallus gallus]
Length = 1477
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 62/118 (52%), Positives = 83/118 (70%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLH-RSMCQSSFF--NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
IL+FLPG+D I SL R + F N+ R+Q+ LHS + T+ QK++ TPP G+RKI
Sbjct: 636 ILIFLPGYDEIISLRDRIIFDDKRFVDNAHRYQVFMLHSNMQTLDQKNVLKTPPSGIRKI 695
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+L+TNIAETSIT++D+V+V+D GK K +FD + LK WIS A+A QRRGRAGR
Sbjct: 696 ILSTNIAETSITVNDVVFVIDSGKMKEKSFDALSCVTMLKTVWISKASAIQRRGRAGR 753
Score = 42.7 bits (99), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 26/37 (70%)
Query: 327 EGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSL 363
E V+ D+I LL +IC + GAIL+FLPG+D I SL
Sbjct: 613 EKVDLDLIMHLLYNICNSSDGGAILIFLPGYDEIISL 649
>gi|255570705|ref|XP_002526307.1| ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223534388|gb|EEF36096.1| ATP-dependent RNA helicase, putative [Ricinus communis]
Length = 1172
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 101/170 (59%), Gaps = 8/170 (4%)
Query: 189 ILVFLPGWDTINSLHRSM-CQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
+LVF+ GWD I+SL + + SR ++ H + + Q+ IF+ P +G RKIVL
Sbjct: 560 VLVFMTGWDDISSLKDKLQVHPILGDPSRVLLLTCHGSMASSEQRLIFDEPNDGARKIVL 619
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKR 307
ATNIAETSITI+D+++V+DCGK K S++D +N L P WIS +A+QRRGRAGR
Sbjct: 620 ATNIAETSITINDVIFVLDCGKAKESSYDALNNTPCLLPSWISKVSAQQRRGRAGRVQPG 679
Query: 308 SETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC---TTQRPGAILVFL 354
YP V + + +L +++ + LQ +C + + G+I FL
Sbjct: 680 ECYHLYPRCVYDAFAEYQLP----EILRTPLQSLCLQIKSLKLGSISEFL 725
Score = 45.4 bits (106), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 42 QSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHLDFITLKRSETQQ 101
+S +++LE RK LP+Y+ +DA+ + NQ+ +ISGETG G + L+ SE +
Sbjct: 265 ESPEGRKILEFRKNLPAYKEKDAISTAISQNQVVIISGETGCGKTTQIPQFILE-SEIES 323
Query: 102 YPNDVLNML 110
V N++
Sbjct: 324 VRGAVCNII 332
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 28/41 (68%), Gaps = 2/41 (4%)
Query: 323 DPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSL 363
+P+ G N +I LL +IC + PGA+LVF+ GWD I+SL
Sbjct: 535 NPDCIGFN--LIEYLLCNICENEMPGAVLVFMTGWDDISSL 573
>gi|302755863|ref|XP_002961355.1| hypothetical protein SELMODRAFT_437743 [Selaginella moellendorffii]
gi|300170014|gb|EFJ36615.1| hypothetical protein SELMODRAFT_437743 [Selaginella moellendorffii]
Length = 1420
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 91/155 (58%), Gaps = 5/155 (3%)
Query: 189 ILVFLPGWDTINSLHRSM-CQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
+LVF+ GW+ I++L R + + SR ++ H + QK IF+ PP VRKI+L
Sbjct: 498 VLVFMTGWEDISALRRQLRTHPVLGHPSRVWLLACHGTMSPDEQKRIFDRPPSRVRKIIL 557
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKR 307
ATNIAETSIT++D+VYVVD GK K ++DV N A L P WIS ++ +QR+GRAGR
Sbjct: 558 ATNIAETSITVEDVVYVVDIGKAKEKSYDVATNTACLLPRWISKSSVRQRKGRAGRLKPG 617
Query: 308 SETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC 342
YP V +D +++ + L ++C
Sbjct: 618 VCYHLYPESVFQAFEDHN----EPEILRTALHNVC 648
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 27/41 (65%)
Query: 327 EGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSM 367
E ++ +I LL HIC + GA+LVF+ GW+ I++L R +
Sbjct: 475 ESIDFTLIEKLLCHICEHGQEGAVLVFMTGWEDISALRRQL 515
>gi|125548350|gb|EAY94172.1| hypothetical protein OsI_15944 [Oryza sativa Indica Group]
Length = 1439
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 67/147 (45%), Positives = 91/147 (61%), Gaps = 11/147 (7%)
Query: 189 ILVFLPGWDTINSLHRSMCQS-SFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
+LVFLPG I+ L + S F S I+PLHS+L Q+ +F +PPE +RKI++
Sbjct: 896 VLVFLPGVAEIDMLIDRLSASVRFGRESSDWILPLHSLLAPTDQRKVFQSPPENIRKIIV 955
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR---- 303
AT+IAETSITIDD++YVVD GK K + ++ + ++++ +WIS ANAKQRRGRAGR
Sbjct: 956 ATDIAETSITIDDVIYVVDTGKHKENRYNPQKKMSSIVEDWISRANAKQRRGRAGRVKPG 1015
Query: 304 ------TLKRSETQQYPNDVLNMLKDP 324
T R E P V ML+ P
Sbjct: 1016 LCFCLYTRHRFEKMMRPFQVPEMLRMP 1042
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 13/92 (14%)
Query: 26 DPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGP 85
+ V KK + K++ Y +MLEAR LP + +D L +++ N + V+ GETG G
Sbjct: 559 EQVESTVLKKHLENKMKQSSYLKMLEARASLPISRFKDHFLQLLKENDVIVVCGETGCG- 617
Query: 86 PLHLDFITLKRSETQQYPNDVLNMLKDPELEG 117
+T Q P +L+ + + EL G
Sbjct: 618 ------------KTTQVPQFILDDMIESELGG 637
>gi|118104219|ref|XP_413970.2| PREDICTED: probable ATP-dependent RNA helicase YTHDC2 isoform X3
[Gallus gallus]
Length = 1439
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 62/118 (52%), Positives = 83/118 (70%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLH-RSMCQSSFF--NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
IL+FLPG+D I SL R + F N+ R+Q+ LHS + T+ QK++ TPP G+RKI
Sbjct: 636 ILIFLPGYDEIISLRDRIIFDDKRFVDNAHRYQVFMLHSNMQTLDQKNVLKTPPSGIRKI 695
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+L+TNIAETSIT++D+V+V+D GK K +FD + LK WIS A+A QRRGRAGR
Sbjct: 696 ILSTNIAETSITVNDVVFVIDSGKMKEKSFDALSCVTMLKTVWISKASAIQRRGRAGR 753
Score = 42.7 bits (99), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 26/37 (70%)
Query: 327 EGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSL 363
E V+ D+I LL +IC + GAIL+FLPG+D I SL
Sbjct: 613 EKVDLDLIMHLLYNICNSSDGGAILIFLPGYDEIISL 649
>gi|68611225|emb|CAE03039.3| OSJNBa0084A10.14 [Oryza sativa Japonica Group]
gi|116309362|emb|CAH66443.1| B0308C03.3 [Oryza sativa Indica Group]
Length = 1439
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 67/147 (45%), Positives = 91/147 (61%), Gaps = 11/147 (7%)
Query: 189 ILVFLPGWDTINSLHRSMCQS-SFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
+LVFLPG I+ L + S F S I+PLHS+L Q+ +F +PPE +RKI++
Sbjct: 896 VLVFLPGVAEIDMLIDRLSASVRFGRESSDWILPLHSLLAPTDQRKVFQSPPENIRKIIV 955
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR---- 303
AT+IAETSITIDD++YVVD GK K + ++ + ++++ +WIS ANAKQRRGRAGR
Sbjct: 956 ATDIAETSITIDDVIYVVDTGKHKENRYNPQKKMSSIVEDWISRANAKQRRGRAGRVKPG 1015
Query: 304 ------TLKRSETQQYPNDVLNMLKDP 324
T R E P V ML+ P
Sbjct: 1016 LCFCLYTRHRFEKMMRPFQVPEMLRMP 1042
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 13/92 (14%)
Query: 26 DPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGP 85
+ V KK + K++ Y +MLEAR LP + +D L +++ N + V+ GETG G
Sbjct: 559 EQVESTVLKKHLENKMKQSSYLKMLEARASLPISRFKDHFLQLLKENDVIVVCGETGCG- 617
Query: 86 PLHLDFITLKRSETQQYPNDVLNMLKDPELEG 117
+T Q P +L+ + + EL G
Sbjct: 618 ------------KTTQVPQFILDDMIESELGG 637
>gi|291235279|ref|XP_002737580.1| PREDICTED: DEAH (Asp-Glu-Ala-His) box polypeptide 36-like
[Saccoglossus kowalevskii]
Length = 495
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/78 (71%), Positives = 68/78 (87%)
Query: 226 LPTVSQKSIFNTPPEGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLK 285
+PTV+Q+ IF TPP G RKI++ATNIAETSITI+D+V+VV+ GK K SN+DVK+NI TLK
Sbjct: 1 MPTVNQRQIFQTPPAGTRKIIIATNIAETSITIEDVVHVVNTGKVKESNYDVKNNICTLK 60
Query: 286 PEWISLANAKQRRGRAGR 303
PEWIS A AKQRRGR+GR
Sbjct: 61 PEWISKAAAKQRRGRSGR 78
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 380 EFAMVDNKPKEIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHPGTTAW-GDPNE 438
+ M + +++I V D + F+ P+ A ++K+LR LD LL K++ PG T W D E
Sbjct: 391 DITMGKDDTQDVIRVDDWIVFKASPTIATLVKKLRIELDELLESKITSPGITQWCHDNKE 450
Query: 439 GNILHC 444
G I++
Sbjct: 451 GKIMNA 456
>gi|498954377|ref|XP_004523655.1| PREDICTED: putative ATP-dependent RNA helicase DHX57-like isoform
X1 [Ceratitis capitata]
Length = 1280
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/160 (43%), Positives = 97/160 (60%), Gaps = 15/160 (9%)
Query: 150 VSPMKV--FFCKNVLQRLMKGVGANSPKRWVKLLRSMLVVPILVFLPGWDTINSLHRSMC 207
+ PMK+ ++VL+ +++G N PK IL+FLPG I ++H ++
Sbjct: 718 MEPMKINPELVESVLKYIVEG-EHNWPKEGT----------ILLFLPGLQEIQTIHEALK 766
Query: 208 QSSFFNS--SRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLATNIAETSITIDDIVYVV 265
S+ F S F ++PLHS L + Q +IF P+G RKIVL+TNIAETSITIDD V+VV
Sbjct: 767 DSTLFGSRNGNFIVLPLHSSLSSEEQSAIFRPAPKGKRKIVLSTNIAETSITIDDCVFVV 826
Query: 266 DCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTL 305
D G K FD N+ +L+ W+S ANA QR+GRAGR +
Sbjct: 827 DYGLMKEKRFDANRNMESLELVWVSRANAMQRKGRAGRVM 866
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Query: 5 HSPKGLTHSVTSWETRQKLLNDPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDA 64
H +G T + ++ N+ D + +++ RY++M+ R+ LP+++
Sbjct: 398 HYERGQTSHTEQQRSLKQTENE---DRVLLRRFLQRQDDERYRKMMSGRRSLPAFEKMIE 454
Query: 65 VLDMVRNNQITVISGETGSG 84
+LD++ +Q+ VISGETG G
Sbjct: 455 ILDLMEQSQVIVISGETGCG 474
>gi|255069955|ref|XP_002507059.1| predicted protein [Micromonas sp. RCC299]
gi|226522334|gb|ACO68317.1| predicted protein [Micromonas sp. RCC299]
Length = 888
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/200 (40%), Positives = 109/200 (54%), Gaps = 16/200 (8%)
Query: 183 SMLVVPILVFLPGWDTINSLHRSMCQSSFFNSSRFQ---IIPLHSMLPTVSQKSIFNTPP 239
SM ILVF+PG I+ LH S+ + ++ +I LHS L T Q++IF PP
Sbjct: 355 SMEPGAILVFMPGLAEISKLHESLGTNPTVRAATGNGKYLIGLHSTLSTAEQRTIFEHPP 414
Query: 240 EGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRG 299
RKIV+ATNIAETSITIDD+VYVVD GK K + +D + L W+S A+AKQRRG
Sbjct: 415 GDTRKIVIATNIAETSITIDDVVYVVDSGKCKENGYDPNTRMQLLLERWVSRASAKQRRG 474
Query: 300 RAGRTLK----RSETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFL- 354
RAGR R T+Q ++V + PE++ V + L I + G I FL
Sbjct: 475 RAGRVRPGRCFRVYTRQMHDEVFDEHTMPEIKRVP---LEGLCLQIQLQRMSGGIAGFLG 531
Query: 355 -----PGWDTINSLHRSMCQ 369
P D+I S +++ Q
Sbjct: 532 KALEPPEEDSIKSAIKTLRQ 551
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 2/107 (1%)
Query: 263 YVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRR--GRAGRTLKRSETQQYPNDVLNM 320
YV D G M N K + A A R R + + Y V +
Sbjct: 272 YVPDRGSDCMRNSKGNSGTNGDKRDGDKTAGASHRPHPAREAEFIAALSRRGYLPSVCDA 331
Query: 321 LKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSM 367
L+ + ++ D++ L++H+C + PGAILVF+PG I+ LH S+
Sbjct: 332 LRAIDQSVIDYDLVTRLVEHVCASMEPGAILVFMPGLAEISKLHESL 378
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 26/37 (70%)
Query: 53 RKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHL 89
RK+LP++ R+ +L+ VR NQ+ +++GETG G L
Sbjct: 69 RKRLPAWSKREELLEAVRANQVVIVAGETGCGKTTQL 105
>gi|498954383|ref|XP_004523656.1| PREDICTED: putative ATP-dependent RNA helicase DHX57-like isoform
X2 [Ceratitis capitata]
Length = 1275
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/160 (43%), Positives = 97/160 (60%), Gaps = 15/160 (9%)
Query: 150 VSPMKV--FFCKNVLQRLMKGVGANSPKRWVKLLRSMLVVPILVFLPGWDTINSLHRSMC 207
+ PMK+ ++VL+ +++G N PK IL+FLPG I ++H ++
Sbjct: 713 MEPMKINPELVESVLKYIVEG-EHNWPKEGT----------ILLFLPGLQEIQTIHEALK 761
Query: 208 QSSFFNS--SRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLATNIAETSITIDDIVYVV 265
S+ F S F ++PLHS L + Q +IF P+G RKIVL+TNIAETSITIDD V+VV
Sbjct: 762 DSTLFGSRNGNFIVLPLHSSLSSEEQSAIFRPAPKGKRKIVLSTNIAETSITIDDCVFVV 821
Query: 266 DCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTL 305
D G K FD N+ +L+ W+S ANA QR+GRAGR +
Sbjct: 822 DYGLMKEKRFDANRNMESLELVWVSRANAMQRKGRAGRVM 861
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Query: 5 HSPKGLTHSVTSWETRQKLLNDPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDA 64
H +G T + ++ N+ D + +++ RY++M+ R+ LP+++
Sbjct: 393 HYERGQTSHTEQQRSLKQTENE---DRVLLRRFLQRQDDERYRKMMSGRRSLPAFEKMIE 449
Query: 65 VLDMVRNNQITVISGETGSG 84
+LD++ +Q+ VISGETG G
Sbjct: 450 ILDLMEQSQVIVISGETGCG 469
>gi|157134931|ref|XP_001663363.1| ATP-dependent RNA helicase [Aedes aegypti]
gi|108870366|gb|EAT34591.1| AAEL013182-PA [Aedes aegypti]
Length = 1281
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/119 (47%), Positives = 79/119 (66%), Gaps = 2/119 (1%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN--SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIV 246
I++FLPG I ++H ++ S F +F ++PLHS L Q +F P+G RKIV
Sbjct: 749 IVIFLPGLAEIQTIHEALTDSKLFGPREGKFILVPLHSTLTNEEQALVFRKAPKGKRKIV 808
Query: 247 LATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTL 305
L+TNIAETS+TIDD V+V+DCG+ K FD N+ +L+ W+S ANA QR+GRAGR +
Sbjct: 809 LSTNIAETSVTIDDCVFVIDCGQMKEKRFDSNRNMESLEVVWVSRANALQRKGRAGRVM 867
>gi|302695215|ref|XP_003037286.1| hypothetical protein SCHCODRAFT_255495 [Schizophyllum commune H4-8]
gi|300110983|gb|EFJ02384.1| hypothetical protein SCHCODRAFT_255495, partial [Schizophyllum
commune H4-8]
Length = 1393
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 80/122 (65%), Gaps = 7/122 (5%)
Query: 189 ILVFLPGWDTINSLHRSMCQSS-------FFNSSRFQIIPLHSMLPTVSQKSIFNTPPEG 241
+LVFLPGWD I S+ R + F NSS++ I LHS +P Q+ IF PPEG
Sbjct: 800 VLVFLPGWDEIQSVTRMLTNPRNGSWRLPFGNSSKYTIHALHSSVPLAEQQVIFEPPPEG 859
Query: 242 VRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRA 301
VR+I+L+TNIAETS+TI D+VYVVD G+ + + +D +++ L W+ L+N QR GRA
Sbjct: 860 VRRIILSTNIAETSVTIPDVVYVVDSGRHRENRYDPDRHMSRLVNAWVGLSNLNQRAGRA 919
Query: 302 GR 303
GR
Sbjct: 920 GR 921
>gi|507630414|ref|XP_004627688.1| PREDICTED: putative ATP-dependent RNA helicase DHX57 isoform X1
[Octodon degus]
Length = 1383
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 81/118 (68%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN---SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVFLPG I L+ + ++ FN S+R I PLHS L + Q+++F PP GV KI
Sbjct: 847 ILVFLPGLAEIKMLYEQLQSNALFNNRRSNRCVIHPLHSSLSSEEQQAVFIKPPAGVTKI 906
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+++TNIAETSITIDD+VYV+DCGK K +D + +L+ ++S ANA QR+GRAGR
Sbjct: 907 IISTNIAETSITIDDVVYVIDCGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGR 964
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 35/50 (70%)
Query: 35 KEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
K+ K SR++Q +L+ R+ LP+++ R+ +L ++R +Q+ VISG TG G
Sbjct: 520 KQFQMKQGSRQFQSVLQERQSLPAWEERETILKLLRKHQVVVISGMTGCG 569
>gi|302798320|ref|XP_002980920.1| hypothetical protein SELMODRAFT_154147 [Selaginella moellendorffii]
gi|300151459|gb|EFJ18105.1| hypothetical protein SELMODRAFT_154147 [Selaginella moellendorffii]
Length = 1118
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 90/155 (58%), Gaps = 5/155 (3%)
Query: 189 ILVFLPGWDTINSLHRSM-CQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
+LVF+ GW+ I++L R + + SR ++ H + QK IF PP VRKI+L
Sbjct: 426 VLVFMTGWEDISALRRQLRTHPVLGHPSRVWLLACHGTMSPDEQKRIFERPPSRVRKIIL 485
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKR 307
ATNIAETSIT++D+VYVVD GK K ++DV N A L P WIS ++ +QR+GRAGR
Sbjct: 486 ATNIAETSITVEDVVYVVDIGKAKEKSYDVATNTACLLPRWISKSSVRQRKGRAGRLKPG 545
Query: 308 SETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC 342
YP V +D +++ + L ++C
Sbjct: 546 VCYHLYPESVFQAFEDHN----EPEILRTALHNVC 576
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 27/41 (65%)
Query: 327 EGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSM 367
E ++ +I LL H+C + GA+LVF+ GW+ I++L R +
Sbjct: 403 ESIDFTLIEKLLCHVCEHGQEGAVLVFMTGWEDISALRRQL 443
>gi|260829479|ref|XP_002609689.1| hypothetical protein BRAFLDRAFT_123593 [Branchiostoma floridae]
gi|229295051|gb|EEN65699.1| hypothetical protein BRAFLDRAFT_123593 [Branchiostoma floridae]
Length = 1907
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 57/117 (48%), Positives = 84/117 (71%), Gaps = 2/117 (1%)
Query: 189 ILVFLPGWDTINSLHRSMC--QSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIV 246
ILVFLPG++ I +L ++ F ++SR+Q+ LHS + + QK +F P GVRKI+
Sbjct: 890 ILVFLPGYEEIVTLRDAIMWDDKRFSDTSRYQVYTLHSAMQSGDQKRVFQQAPAGVRKII 949
Query: 247 LATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
L+TNIAETS+TI+D+V+V+D GK K +FD +++ LK W+S A+A+QR+GRAGR
Sbjct: 950 LSTNIAETSVTINDVVFVIDSGKVKEKSFDALTSVSMLKSVWVSKASAQQRKGRAGR 1006
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 41/68 (60%), Gaps = 4/68 (5%)
Query: 304 TLKRSETQQYPNDVLNMLK----DPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDT 359
TL SE+ Q + +LK + E V+ D+I LL +IC++Q GAILVFLPG++
Sbjct: 840 TLLVSESSQLSTEDRELLKAYHQSFDDEHVDLDLILCLLFNICSSQEEGAILVFLPGYEE 899
Query: 360 INSLHRSM 367
I +L ++
Sbjct: 900 IVTLRDAI 907
>gi|505840665|ref|XP_004613850.1| PREDICTED: ATP-dependent RNA helicase A [Sorex araneus]
Length = 1309
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 79/115 (68%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPGW+ I ++ + + + F S R+QI+PLHS +P Q+ +F+ P+GV K++L+
Sbjct: 667 VLVFLPGWNLIYTMQKHLEMNPHFGSHRYQILPLHSQIPREEQRKVFDPVPDGVTKVILS 726
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+D+VYV+D K K+ F +N+ W S N +QR+GRAGR
Sbjct: 727 TNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGR 781
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 30/44 (68%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
++I +LL++I T PGA+LVFLPGW+ I ++ + + + F S
Sbjct: 649 ELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHFGS 692
>gi|507630418|ref|XP_004627689.1| PREDICTED: putative ATP-dependent RNA helicase DHX57 isoform X2
[Octodon degus]
Length = 1330
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 81/118 (68%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN---SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVFLPG I L+ + ++ FN S+R I PLHS L + Q+++F PP GV KI
Sbjct: 794 ILVFLPGLAEIKMLYEQLQSNALFNNRRSNRCVIHPLHSSLSSEEQQAVFIKPPAGVTKI 853
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+++TNIAETSITIDD+VYV+DCGK K +D + +L+ ++S ANA QR+GRAGR
Sbjct: 854 IISTNIAETSITIDDVVYVIDCGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGR 911
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 35/50 (70%)
Query: 35 KEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
K+ K SR++Q +L+ R+ LP+++ R+ +L ++R +Q+ VISG TG G
Sbjct: 467 KQFQMKQGSRQFQSVLQERQSLPAWEERETILKLLRKHQVVVISGMTGCG 516
>gi|443685713|gb|ELT89229.1| hypothetical protein CAPTEDRAFT_101871 [Capitella teleta]
Length = 847
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 79/118 (66%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF---NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
+LVFLPG I ++ + + F N SRF I+PLHS L + Q +F+TPP+G KI
Sbjct: 313 VLVFLPGLAEIKQVYELLLTNPVFGGRNKSRFWILPLHSTLSSEDQHRVFSTPPKGTTKI 372
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
VL TNIAETSITIDD+VYV+D G+ K +D ++ +L W S ANA+QR+GRAGR
Sbjct: 373 VLTTNIAETSITIDDVVYVIDSGRMKEKRYDASKSMESLDLVWESKANAQQRKGRAGR 430
>gi|321465352|gb|EFX76354.1| hypothetical protein DAPPUDRAFT_306238 [Daphnia pulex]
Length = 1426
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 81/117 (69%), Gaps = 2/117 (1%)
Query: 189 ILVFLPGWDTI-NSLHRSMCQSS-FFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIV 246
+LVFLPG+D I N R M S F S +F++ LHS + + Q+ +F PP G RKIV
Sbjct: 549 VLVFLPGYDEIMNIRDRIMYNDSRFAGSGKFEVYTLHSSMQSGDQRRVFFRPPSGKRKIV 608
Query: 247 LATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
L+TN+AETSITIDDIV+V+D GK K+ +FD ++ LK EW+ A+A QR+GRAGR
Sbjct: 609 LSTNLAETSITIDDIVFVIDTGKVKVKSFDALTGVSALKAEWVPQASAIQRKGRAGR 665
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 29/43 (67%)
Query: 42 QSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
Q + ++ RK LP++ R+ +L+M+ N++ +I+G+TGSG
Sbjct: 150 QPAKSSALIADRKSLPTWSHREEILNMIAQNKVVMITGDTGSG 192
>gi|507549942|ref|XP_004658782.1| PREDICTED: ATP-dependent RNA helicase A [Jaculus jaculus]
Length = 1378
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 79/115 (68%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPGW+ I ++ + + + F S R+QI+PLHS +P Q+ +F+ P+GV K++L+
Sbjct: 655 VLVFLPGWNLIYTMQKHLEMNPHFGSHRYQILPLHSQIPREEQRKVFDPVPDGVTKVILS 714
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+D+VYV+D K K+ F +N+ W S N +QR+GRAGR
Sbjct: 715 TNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGR 769
Score = 42.0 bits (97), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 30/44 (68%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
++I +LL++I T PGA+LVFLPGW+ I ++ + + + F S
Sbjct: 637 ELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHFGS 680
>gi|426240004|ref|XP_004013905.1| PREDICTED: ATP-dependent RNA helicase A [Ovis aries]
Length = 1287
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 78/115 (67%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPGW+ I ++ + + + F S R+QI+PLHS +P Q+ +F+ P GV KI+L+
Sbjct: 650 VLVFLPGWNLIYTMQKHLEMNPHFGSHRYQILPLHSQIPREEQRKVFDPVPSGVTKIILS 709
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+D+VYV+D K K+ F +N+ W S N +QR+GRAGR
Sbjct: 710 TNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGR 764
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 29/44 (65%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
++I +LL +I T PGA+LVFLPGW+ I ++ + + + F S
Sbjct: 632 ELIEALLLYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHFGS 675
>gi|296478925|tpg|DAA21040.1| TPA: ATP-dependent RNA helicase A [Bos taurus]
gi|440892736|gb|ELR45806.1| ATP-dependent RNA helicase A [Bos grunniens mutus]
Length = 1287
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 78/115 (67%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPGW+ I ++ + + + F S R+QI+PLHS +P Q+ +F+ P GV KI+L+
Sbjct: 650 VLVFLPGWNLIYTMQKHLEMNPHFGSHRYQILPLHSQIPREEQRKVFDPVPSGVTKIILS 709
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+D+VYV+D K K+ F +N+ W S N +QR+GRAGR
Sbjct: 710 TNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGR 764
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 29/44 (65%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
++I +LL +I T PGA+LVFLPGW+ I ++ + + + F S
Sbjct: 632 ELIEALLLYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHFGS 675
>gi|27806665|ref|NP_776461.1| ATP-dependent RNA helicase A [Bos taurus]
gi|2500541|sp|Q28141.1|DHX9_BOVIN RecName: Full=ATP-dependent RNA helicase A; Short=RHA; AltName:
Full=DEAH box protein 9; AltName: Full=Nuclear DNA
helicase II; Short=NDH II
gi|577739|emb|CAA58036.1| nuclear DNA helicase II [Bos taurus]
Length = 1287
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 78/115 (67%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPGW+ I ++ + + + F S R+QI+PLHS +P Q+ +F+ P GV KI+L+
Sbjct: 650 VLVFLPGWNLIYTMQKHLEMNPHFGSHRYQILPLHSQIPREEQRKVFDPVPSGVTKIILS 709
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+D+VYV+D K K+ F +N+ W S N +QR+GRAGR
Sbjct: 710 TNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGR 764
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 29/44 (65%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
++I +LL +I T PGA+LVFLPGW+ I ++ + + + F S
Sbjct: 632 ELIEALLLYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHFGS 675
>gi|392571491|gb|EIW64663.1| P-loop containing nucleoside triphosphate hydrolase protein
[Trametes versicolor FP-101664 SS1]
Length = 1293
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 56/121 (46%), Positives = 81/121 (66%), Gaps = 6/121 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSS------FFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGV 242
+LVFLPGWD I+++ R + +S F ++SRF I LHS +P Q++IF PP+G+
Sbjct: 661 VLVFLPGWDDISAVRRVLTDNSKPLGFDFNDTSRFSIHLLHSTIPVAEQQAIFEPPPKGI 720
Query: 243 RKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAG 302
R+++L+TNIAETS+TI D+VYVVD + K +D +I+ L W+ +N QR GRAG
Sbjct: 721 RRVILSTNIAETSVTIPDVVYVVDTARVKEQRYDPARHISNLVSAWVGSSNLNQRAGRAG 780
Query: 303 R 303
R
Sbjct: 781 R 781
>gi|291415218|ref|XP_002723851.1| PREDICTED: ATP-dependent RNA helicase A [Oryctolagus cuniculus]
Length = 1260
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 79/115 (68%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPGW+ I ++ + + ++ F S R+QI+PLHS +P Q+ +F+ P GV K++L+
Sbjct: 653 VLVFLPGWNLIYTMQKHLEMNAHFGSHRYQILPLHSQIPREEQRKVFDPVPVGVTKVILS 712
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+D+VYV+D K K+ F +N+ W S N +QR+GRAGR
Sbjct: 713 TNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGR 767
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 31/44 (70%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
++I +LL++I T PGA+LVFLPGW+ I ++ + + ++ F S
Sbjct: 635 ELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNAHFGS 678
>gi|432089382|gb|ELK23333.1| ATP-dependent RNA helicase A [Myotis davidii]
Length = 1163
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 79/115 (68%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPGW+ I ++ + + ++ F S R+QI+PLHS +P Q+ +F+ P GV K++L+
Sbjct: 544 VLVFLPGWNLIYTMQKHLEMNAHFGSHRYQILPLHSQIPREEQRKVFDPVPVGVTKVILS 603
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+D+VYV+D K K+ F +N+ W S N +QR+GRAGR
Sbjct: 604 TNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGR 658
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 31/44 (70%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
++I +LL++I T PGA+LVFLPGW+ I ++ + + ++ F S
Sbjct: 526 ELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNAHFGS 569
>gi|348500733|ref|XP_003437927.1| PREDICTED: putative ATP-dependent RNA helicase DHX30-like
[Oreochromis niloticus]
Length = 1156
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 57/115 (49%), Positives = 75/115 (65%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+L FLPGW I ++ + + F+S I+PLHS L Q+++F P G RKIVLA
Sbjct: 635 VLCFLPGWQDIKAVQEKLEEKPHFSSGSQMILPLHSSLSVADQQAVFQRPQVGQRKIVLA 694
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETS+TIDDIV+VVD G K N+D + ++ L WIS +N QR+GRAGR
Sbjct: 695 TNIAETSVTIDDIVHVVDAGTHKEQNYDPRTKVSCLDTVWISRSNVTQRKGRAGR 749
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 26/44 (59%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
D++ +++HI PGA+L FLPGW I ++ + + F+S
Sbjct: 617 DLVADVIEHIDRCGEPGAVLCFLPGWQDIKAVQEKLEEKPHFSS 660
>gi|390604353|gb|EIN13744.1| P-loop containing nucleoside triphosphate hydrolase protein
[Punctularia strigosozonata HHB-11173 SS5]
Length = 983
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 58/121 (47%), Positives = 81/121 (66%), Gaps = 6/121 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSS------FFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGV 242
+LVFLPGW+ I ++ R + SS F +SS++ I LHS +P Q+ IF PP G+
Sbjct: 363 VLVFLPGWEDIQAVQRCLLDSSNQLGMRFSDSSKYNIHVLHSTVPLSEQQVIFEPPPAGI 422
Query: 243 RKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAG 302
R+I+L+TNIAETSITI D+VYVVD GK K +D + ++++L W+ +N QR GRAG
Sbjct: 423 RRIILSTNIAETSITIPDVVYVVDTGKIKEQRYDPERHMSSLVSAWVGSSNLNQRAGRAG 482
Query: 303 R 303
R
Sbjct: 483 R 483
>gi|405959793|gb|EKC25785.1| ATP-dependent RNA helicase A-like protein [Crassostrea gigas]
Length = 1464
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 59/128 (46%), Positives = 82/128 (64%), Gaps = 2/128 (1%)
Query: 176 RWVKLLRSMLVVPILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIF 235
+++K L+ + IL+FLPGW+ I +LHR + F ++ +PLHS +P Q+ +F
Sbjct: 642 KYIKTLK--IPGAILIFLPGWNLIFALHRYLETHPEFGGPMYRALPLHSQMPREDQRKVF 699
Query: 236 NTPPEGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAK 295
PEGV KI+L+TNIAETS+TI+D+VYVVD K KM F +N+ W S N +
Sbjct: 700 EPVPEGVTKIILSTNIAETSVTINDVVYVVDSCKAKMKLFTSHNNMTNYATVWASKTNLE 759
Query: 296 QRRGRAGR 303
QRRGRAGR
Sbjct: 760 QRRGRAGR 767
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 46/86 (53%), Gaps = 3/86 (3%)
Query: 305 LKRSETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLH 364
L +E + + ML + E+ + ++I +L+++I T + PGAIL+FLPGW+ I +LH
Sbjct: 611 LVNNEYSEQTRRAMAMLNEKEM---SFELIEALIKYIKTLKIPGAILIFLPGWNLIFALH 667
Query: 365 RSMCQSSFFNSCLLYEFAMVDNKPKE 390
R + F + + P+E
Sbjct: 668 RYLETHPEFGGPMYRALPLHSQMPRE 693
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 4/47 (8%)
Query: 42 QSRRYQE----MLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
QSR + E M+E R LP YQ D +L +++N+ +T+I GETG G
Sbjct: 368 QSRNHNENLKMMMEERTHLPVYQSHDHILQVIKNSPVTLIRGETGCG 414
>gi|471364820|ref|XP_004372954.1| PREDICTED: ATP-dependent RNA helicase A [Trichechus manatus
latirostris]
Length = 1281
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 79/115 (68%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPGW+ I ++ + + ++ F S R+QI+PLHS +P Q+ +F+ P GV K++L+
Sbjct: 654 VLVFLPGWNLIYTMQKHLEMNAHFGSHRYQILPLHSQIPREEQRKVFDPVPVGVTKVILS 713
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+D+VYV+D K K+ F +N+ W S N +QR+GRAGR
Sbjct: 714 TNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGR 768
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 31/44 (70%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
++I +LL++I T PGA+LVFLPGW+ I ++ + + ++ F S
Sbjct: 636 ELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNAHFGS 679
>gi|348543015|ref|XP_003458979.1| PREDICTED: ATP-dependent RNA helicase A-like protein-like
[Oreochromis niloticus]
Length = 1288
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 79/115 (68%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPGW+ I S+ R + + F S+R++I+PLHS +P Q+ +F P+ +RK++L+
Sbjct: 671 VLVFLPGWNLIYSMQRHLESNPHFGSNRYRILPLHSQIPREEQRRVFEPVPDDIRKVILS 730
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+D+VYVVD K K+ F +N+ W S N +QR+GRAGR
Sbjct: 731 TNIAETSITINDVVYVVDSCKQKVKLFTSHNNMTNYATVWASKTNLEQRKGRAGR 785
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 30/44 (68%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
+++ +LL++I T Q GA+LVFLPGW+ I S+ R + + F S
Sbjct: 653 ELVEALLKYIETLQVAGAVLVFLPGWNLIYSMQRHLESNPHFGS 696
>gi|46125529|ref|XP_387318.1| hypothetical protein FG07142.1 [Fusarium graminearum PH-1]
Length = 1348
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 61/115 (53%), Positives = 79/115 (68%), Gaps = 5/115 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL+FLPG IN R++ S ++PLH+ L T QK +F++PP G RKIV+A
Sbjct: 841 ILIFLPGVGEINQACRALKAIS-----SLHVLPLHASLETREQKRVFSSPPPGKRKIVVA 895
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TN+AETSITIDDIV V+D GK K ++FDV++N+ L+ W S A KQRRGRAGR
Sbjct: 896 TNVAETSITIDDIVAVIDSGKVKETSFDVQNNMRKLEETWASRAACKQRRGRAGR 950
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 42/57 (73%)
Query: 28 VLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
V D +++ +R+ S ++M+ R+KLP++QMR+A++ VR+N +T+ISGETGSG
Sbjct: 552 VKDEKNREQWLRRQGSTSLKDMISKRQKLPAWQMREAIIGTVRSNHVTIISGETGSG 608
>gi|521034624|gb|EPQ16408.1| ATP-dependent RNA helicase A [Myotis brandtii]
Length = 1277
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 79/115 (68%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPGW+ I ++ + + ++ F S R+QI+PLHS +P Q+ +F+ P GV K++L+
Sbjct: 653 VLVFLPGWNLIYTMQKHLEMNAHFGSHRYQILPLHSQIPREEQRKVFDPVPVGVTKVILS 712
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+D+VYV+D K K+ F +N+ W S N +QR+GRAGR
Sbjct: 713 TNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGR 767
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 31/44 (70%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
++I +LL++I T PGA+LVFLPGW+ I ++ + + ++ F S
Sbjct: 635 ELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNAHFGS 678
>gi|482683169|ref|XP_004444313.1| GA11141, isoform B [Drosophila pseudoobscura pseudoobscura]
gi|478540026|gb|ENO01726.1| GA11141, isoform B [Drosophila pseudoobscura pseudoobscura]
Length = 989
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 57/116 (49%), Positives = 80/116 (68%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGW+ I +L + + S+ F+S +++I+P HS +P Q+ +F PEGV KI+L+
Sbjct: 326 ILVFLPGWNLIFALMKFLQTSNHFSSPKYRILPCHSQIPRDDQRKVFEPVPEGVTKIILS 385
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT 304
TNIAETSITIDDIV+V+D K +M F +N+ + W S N +QR+GRAGR
Sbjct: 386 TNIAETSITIDDIVFVIDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGRV 441
Score = 45.4 bits (106), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 39/64 (60%), Gaps = 3/64 (4%)
Query: 312 QYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSS 371
Q + ML + + V+ ++I SLL HI + PGAILVFLPGW+ I +L + + S+
Sbjct: 291 QQTRTAMGMLSESD---VSFELIESLLLHIKSKNIPGAILVFLPGWNLIFALMKFLQTSN 347
Query: 372 FFNS 375
F+S
Sbjct: 348 HFSS 351
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 24 LNDPVLDAAFKKEMI-RKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETG 82
++D LD F++ ++ R+ YQ+ L+ R KLP MR +L + +N + +I G TG
Sbjct: 22 IDDLSLD--FERSILDRRHNDSEYQQFLDFRDKLPIAAMRSEILSAINDNPVVIIRGNTG 79
Query: 83 SG 84
G
Sbjct: 80 CG 81
>gi|408396568|gb|EKJ75724.1| hypothetical protein FPSE_04106 [Fusarium pseudograminearum CS3096]
Length = 1348
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 61/115 (53%), Positives = 79/115 (68%), Gaps = 5/115 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL+FLPG IN R++ S ++PLH+ L T QK +F++PP G RKIV+A
Sbjct: 841 ILIFLPGVGEINQACRALKAIS-----SLHVLPLHASLETREQKRVFSSPPPGKRKIVVA 895
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TN+AETSITIDDIV V+D GK K ++FDV++N+ L+ W S A KQRRGRAGR
Sbjct: 896 TNVAETSITIDDIVAVIDSGKVKETSFDVQNNMRKLEETWASRAACKQRRGRAGR 950
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 42/57 (73%)
Query: 28 VLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
V D +++ +R+ S ++M+ R+KLP++QMR+A++ VR+N +T+ISGETGSG
Sbjct: 552 VKDEKNREQWLRRQGSTSLKDMISKRQKLPAWQMREAIIGTVRSNHVTIISGETGSG 608
>gi|345496316|ref|XP_001604084.2| PREDICTED: probable ATP-dependent RNA helicase YTHDC2 [Nasonia
vitripennis]
Length = 1154
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 60/119 (50%), Positives = 79/119 (66%), Gaps = 1/119 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN-SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFLPG+D I ++ + + N +R+ + LHS + T QK +F P+G RKI+L
Sbjct: 584 ILVFLPGYDDIVTMREKINGENRMNQGNRYNLYILHSNMQTSDQKRVFRPSPQGTRKIIL 643
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLK 306
+TNIAETSITIDD+VYV+D GK K +FD + L+ WIS A AKQR+GRAGR K
Sbjct: 644 STNIAETSITIDDVVYVIDSGKVKEKSFDAISGVCMLRSNWISQACAKQRKGRAGRCQK 702
>gi|504132551|ref|XP_004578890.1| PREDICTED: ATP-dependent RNA helicase A-like [Ochotona princeps]
Length = 1259
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 78/115 (67%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPGW+ I ++ + + + F S R+QI+PLHS +P Q+ +F+ P GV K++L+
Sbjct: 654 VLVFLPGWNLIYTMQKHLEMNPHFGSHRYQILPLHSQIPREEQRKVFDPVPNGVTKVILS 713
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+D+VYV+D K K+ F +N+ W S N +QR+GRAGR
Sbjct: 714 TNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGR 768
Score = 42.4 bits (98), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 30/44 (68%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
++I +LL++I T PGA+LVFLPGW+ I ++ + + + F S
Sbjct: 636 ELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHFGS 679
>gi|466035551|ref|XP_004275251.1| PREDICTED: ATP-dependent RNA helicase A [Orcinus orca]
Length = 1252
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 78/115 (67%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPGW+ I ++ + + + F S R+QI+PLHS +P Q+ +F+ P GV K++L+
Sbjct: 654 VLVFLPGWNLIYTMQKHLEMNPHFGSHRYQILPLHSQIPREEQRKVFDPVPAGVTKVILS 713
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+D+VYV+D K K+ F +N+ W S N +QR+GRAGR
Sbjct: 714 TNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGR 768
Score = 42.4 bits (98), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 30/44 (68%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
++I +LL++I T PGA+LVFLPGW+ I ++ + + + F S
Sbjct: 636 ELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHFGS 679
>gi|225448150|ref|XP_002263889.1| PREDICTED: ATP-dependent RNA helicase DHX29 [Vitis vinifera]
gi|297739540|emb|CBI29722.3| unnamed protein product [Vitis vinifera]
Length = 1458
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 68/150 (45%), Positives = 92/150 (61%), Gaps = 11/150 (7%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNS-SRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFLPG I L + S F S ++PLHS + + Q+ +F PPE +RK+++
Sbjct: 917 ILVFLPGVAEIYMLLDKLAASYRFRGLSSDWLLPLHSSIASDDQRKVFLQPPENIRKVII 976
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR---- 303
ATNIAETSITIDD+VYV+DCGK K + ++ + ++++ +WIS ANAKQRRGRAGR
Sbjct: 977 ATNIAETSITIDDVVYVIDCGKHKENRYNPQKKLSSMVEDWISQANAKQRRGRAGRVKPG 1036
Query: 304 ------TLKRSETQQYPNDVLNMLKDPELE 327
T R E P V ML+ P +E
Sbjct: 1037 ICFSLYTHYRFEKLLRPFQVPEMLRMPLVE 1066
Score = 42.0 bits (97), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 33/52 (63%)
Query: 33 FKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
K+E K++ +Y++ML+ R LP +++ +L +++ + V+ GETGSG
Sbjct: 591 LKQEYENKMKIGKYKDMLKTRSGLPIAELKSEILQVLKEKSVLVVCGETGSG 642
>gi|512860959|ref|XP_004889764.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2 isoform X1
[Heterocephalus glaber]
gi|512947529|ref|XP_004836242.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2
[Heterocephalus glaber]
Length = 1434
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 61/118 (51%), Positives = 81/118 (68%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLH-RSMCQSSFFNSS--RFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
+L+FLPG+D I L R + F S R+Q+ LHS + T QK + TPP GVRKI
Sbjct: 629 VLIFLPGYDEIVGLRDRILFDDKRFADSAHRYQVFMLHSNMQTSDQKKVLKTPPAGVRKI 688
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+L+TNIAETSIT++D+V+V+D GK K +FD + + LK WIS A+AKQR+GRAGR
Sbjct: 689 ILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAKQRKGRAGR 746
>gi|344278461|ref|XP_003411012.1| PREDICTED: ATP-dependent RNA helicase A-like [Loxodonta africana]
Length = 1286
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 79/115 (68%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPGW+ I ++ + + ++ F S R+QI+PLHS +P Q+ +F+ P GV K++L+
Sbjct: 654 VLVFLPGWNLIYTMQKHLEMNAHFGSHRYQILPLHSQIPREEQRKVFDPVPVGVTKVILS 713
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+D+VYV+D K K+ F +N+ W S N +QR+GRAGR
Sbjct: 714 TNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGR 768
Score = 43.5 bits (101), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 31/44 (70%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
++I +LL++I T PGA+LVFLPGW+ I ++ + + ++ F S
Sbjct: 636 ELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNAHFGS 679
>gi|470629979|ref|XP_004321636.1| PREDICTED: ATP-dependent RNA helicase A-like [Tursiops truncatus]
Length = 1252
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 78/115 (67%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPGW+ I ++ + + + F S R+QI+PLHS +P Q+ +F+ P GV K++L+
Sbjct: 654 VLVFLPGWNLIYTMQKHLEMNPHFGSHRYQILPLHSQIPREEQRKVFDPVPAGVTKVILS 713
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+D+VYV+D K K+ F +N+ W S N +QR+GRAGR
Sbjct: 714 TNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGR 768
Score = 42.4 bits (98), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 30/44 (68%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
++I +LL++I T PGA+LVFLPGW+ I ++ + + + F S
Sbjct: 636 ELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHFGS 679
>gi|472354532|ref|XP_004396926.1| PREDICTED: ATP-dependent RNA helicase A isoform 1 [Odobenus
rosmarus divergens]
Length = 1277
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 78/115 (67%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPGW+ I ++ + + + F S R+QI+PLHS +P Q+ +F+ P GV K++L+
Sbjct: 654 VLVFLPGWNLIYTMQKHLEMNPHFGSHRYQILPLHSQIPREEQRKVFDPVPAGVTKVILS 713
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+D+VYV+D K K+ F +N+ W S N +QR+GRAGR
Sbjct: 714 TNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGR 768
Score = 42.4 bits (98), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 30/44 (68%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
++I +LL++I T PGA+LVFLPGW+ I ++ + + + F S
Sbjct: 636 ELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHFGS 679
>gi|281337823|gb|EFB13407.1| hypothetical protein PANDA_013142 [Ailuropoda melanoleuca]
Length = 1155
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 78/115 (67%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPGW+ I ++ + + + F S R+QI+PLHS +P Q+ +F+ P GV K++L+
Sbjct: 654 VLVFLPGWNLIYTMQKHLEMNPHFGSHRYQILPLHSQIPREEQRKVFDPVPAGVTKVILS 713
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+D+VYV+D K K+ F +N+ W S N +QR+GRAGR
Sbjct: 714 TNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGR 768
Score = 42.4 bits (98), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 30/44 (68%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
++I +LL++I T PGA+LVFLPGW+ I ++ + + + F S
Sbjct: 636 ELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHFGS 679
>gi|511896772|ref|XP_004767979.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase A
[Mustela putorius furo]
gi|511980577|ref|XP_004808143.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase A
[Mustela putorius furo]
Length = 1293
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 78/115 (67%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPGW+ I ++ + + + F S R+QI+PLHS +P Q+ +F+ P GV K++L+
Sbjct: 654 VLVFLPGWNLIYTMQKHLEMNPHFGSHRYQILPLHSQIPREEQRKVFDPVPAGVTKVILS 713
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+D+VYV+D K K+ F +N+ W S N +QR+GRAGR
Sbjct: 714 TNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGR 768
Score = 42.4 bits (98), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 30/44 (68%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
++I +LL++I T PGA+LVFLPGW+ I ++ + + + F S
Sbjct: 636 ELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHFGS 679
>gi|507663497|ref|XP_004706847.1| PREDICTED: ATP-dependent RNA helicase A [Echinops telfairi]
Length = 1159
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 79/115 (68%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPGW+ I ++ + + ++ F S R+QI+PLHS +P Q+ +F+ P GV K++L+
Sbjct: 547 VLVFLPGWNLIYTMQKHLEMNAHFGSHRYQILPLHSQIPREEQRKVFDPVPVGVTKVILS 606
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+D+VYV+D K K+ F +N+ W S N +QR+GRAGR
Sbjct: 607 TNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGR 661
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 31/44 (70%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
++I +LL++I T PGA+LVFLPGW+ I ++ + + ++ F S
Sbjct: 529 ELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNAHFGS 572
>gi|351703291|gb|EHB06210.1| Putative ATP-dependent RNA helicase YTHDC2 [Heterocephalus glaber]
Length = 1433
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 61/118 (51%), Positives = 81/118 (68%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLH-RSMCQSSFFNSS--RFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
+L+FLPG+D I L R + F S R+Q+ LHS + T QK + TPP GVRKI
Sbjct: 629 VLIFLPGYDEIVGLRDRILFDDKRFADSAHRYQVFMLHSNMQTSDQKKVLKTPPAGVRKI 688
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+L+TNIAETSIT++D+V+V+D GK K +FD + + LK WIS A+AKQR+GRAGR
Sbjct: 689 ILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAKQRKGRAGR 746
>gi|194210388|ref|XP_001489530.2| PREDICTED: ATP-dependent RNA helicase A [Equus caballus]
Length = 1272
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 78/115 (67%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPGW+ I ++ + + + F S R+QI+PLHS +P Q+ +F+ P GV K++L+
Sbjct: 653 VLVFLPGWNLIYTMQKHLEMNPHFGSHRYQILPLHSQIPREEQRKVFDPVPAGVTKVILS 712
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+D+VYV+D K K+ F +N+ W S N +QR+GRAGR
Sbjct: 713 TNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGR 767
Score = 42.4 bits (98), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 30/44 (68%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
++I +LL++I T PGA+LVFLPGW+ I ++ + + + F S
Sbjct: 635 ELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHFGS 678
>gi|301776997|ref|XP_002923919.1| PREDICTED: ATP-dependent RNA helicase A-like [Ailuropoda
melanoleuca]
Length = 1276
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 78/115 (67%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPGW+ I ++ + + + F S R+QI+PLHS +P Q+ +F+ P GV K++L+
Sbjct: 654 VLVFLPGWNLIYTMQKHLEMNPHFGSHRYQILPLHSQIPREEQRKVFDPVPAGVTKVILS 713
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+D+VYV+D K K+ F +N+ W S N +QR+GRAGR
Sbjct: 714 TNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGR 768
Score = 42.4 bits (98), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 30/44 (68%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
++I +LL++I T PGA+LVFLPGW+ I ++ + + + F S
Sbjct: 636 ELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHFGS 679
>gi|512860962|ref|XP_004889765.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2 isoform X2
[Heterocephalus glaber]
Length = 1433
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 61/118 (51%), Positives = 81/118 (68%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLH-RSMCQSSFFNSS--RFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
+L+FLPG+D I L R + F S R+Q+ LHS + T QK + TPP GVRKI
Sbjct: 629 VLIFLPGYDEIVGLRDRILFDDKRFADSAHRYQVFMLHSNMQTSDQKKVLKTPPAGVRKI 688
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+L+TNIAETSIT++D+V+V+D GK K +FD + + LK WIS A+AKQR+GRAGR
Sbjct: 689 ILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAKQRKGRAGR 746
>gi|410986036|ref|XP_003999318.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase A [Felis
catus]
Length = 1341
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 78/115 (67%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPGW+ I ++ + + + F S R+QI+PLHS +P Q+ +F+ P GV K++L+
Sbjct: 654 VLVFLPGWNLIYTMQKHLEMNPHFGSHRYQILPLHSQIPREEQRKVFDPVPSGVTKVILS 713
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+D+VYV+D K K+ F +N+ W S N +QR+GRAGR
Sbjct: 714 TNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGR 768
Score = 42.4 bits (98), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 30/44 (68%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
++I +LL++I T PGA+LVFLPGW+ I ++ + + + F S
Sbjct: 636 ELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHFGS 679
>gi|472354534|ref|XP_004396927.1| PREDICTED: ATP-dependent RNA helicase A isoform 2 [Odobenus
rosmarus divergens]
Length = 1062
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 78/116 (67%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPGW+ I ++ + + + F S R+QI+PLHS +P Q+ +F+ P GV K++L+
Sbjct: 439 VLVFLPGWNLIYTMQKHLEMNPHFGSHRYQILPLHSQIPREEQRKVFDPVPAGVTKVILS 498
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT 304
TNIAETSITI+D+VYV+D K K+ F +N+ W S N +QR+GRAGR
Sbjct: 499 TNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRV 554
Score = 42.4 bits (98), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 30/44 (68%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
++I +LL++I T PGA+LVFLPGW+ I ++ + + + F S
Sbjct: 421 ELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHFGS 464
>gi|198459278|ref|XP_001361331.2| GA11141, isoform A [Drosophila pseudoobscura pseudoobscura]
gi|198136635|gb|EAL25909.2| GA11141, isoform A [Drosophila pseudoobscura pseudoobscura]
Length = 1318
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 57/115 (49%), Positives = 80/115 (69%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGW+ I +L + + S+ F+S +++I+P HS +P Q+ +F PEGV KI+L+
Sbjct: 655 ILVFLPGWNLIFALMKFLQTSNHFSSPKYRILPCHSQIPRDDQRKVFEPVPEGVTKIILS 714
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITIDDIV+V+D K +M F +N+ + W S N +QR+GRAGR
Sbjct: 715 TNIAETSITIDDIVFVIDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGR 769
Score = 45.1 bits (105), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 39/64 (60%), Gaps = 3/64 (4%)
Query: 312 QYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSS 371
Q + ML + + V+ ++I SLL HI + PGAILVFLPGW+ I +L + + S+
Sbjct: 620 QQTRTAMGMLSESD---VSFELIESLLLHIKSKNIPGAILVFLPGWNLIFALMKFLQTSN 676
Query: 372 FFNS 375
F+S
Sbjct: 677 HFSS 680
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 24 LNDPVLDAAFKKEMI-RKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETG 82
++D LD F++ ++ R+ YQ+ L+ R KLP MR +L + +N + +I G TG
Sbjct: 351 IDDLSLD--FERSILDRRHNDSEYQQFLDFRDKLPIAAMRSEILSAINDNPVVIIRGNTG 408
Query: 83 SG 84
G
Sbjct: 409 CG 410
>gi|348526524|ref|XP_003450769.1| PREDICTED: putative ATP-dependent RNA helicase DHX57 [Oreochromis
niloticus]
Length = 1414
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 81/118 (68%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNS---SRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
+LVFLPG I L+ + + FN+ SR + PLHS L Q+++F+ PP+GV KI
Sbjct: 877 VLVFLPGLAEIKMLYEQLQSNRMFNNRGVSRCVVYPLHSTLSNEEQQAVFSRPPDGVTKI 936
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+++TNIAETS+TIDD+VYV+D GK K +D ++ +L+ W+S ANA QR+GRAGR
Sbjct: 937 IISTNIAETSVTIDDVVYVIDSGKMKEKRYDSSKSMESLEDTWVSQANALQRKGRAGR 994
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 33/50 (66%)
Query: 35 KEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
KE RK SRRY MLE RK LP++Q ++ +LD + Q+ VISG TG G
Sbjct: 548 KEFSRKQSSRRYSSMLEQRKNLPAWQEKEHILDALDQCQVLVISGMTGCG 597
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 8/71 (11%)
Query: 317 VLNMLKDPELEGVNNDVIFSLLQHICTTQR---PGAILVFLPGWDTINSLHRSMCQSSFF 373
VL + +L+ +N D++ SLL+ I + PGA+LVFLPG I L+ + + F
Sbjct: 841 VLKTIATMDLDKINMDLVESLLEWIVEGKHNYPPGAVLVFLPGLAEIKMLYEQLQSNRMF 900
Query: 374 NS-----CLLY 379
N+ C++Y
Sbjct: 901 NNRGVSRCVVY 911
>gi|488551785|ref|XP_004467326.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like [Dasypus
novemcinctus]
Length = 1382
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/118 (51%), Positives = 81/118 (68%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLH-RSMCQSSFF--NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
IL+FLPG+D I L R + F N+ RFQ+ LHS + T QK + PP GVRKI
Sbjct: 625 ILIFLPGYDEIVGLRDRILFDDKRFAENTHRFQVFMLHSNMQTSDQKKVLKNPPAGVRKI 684
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+L+TNIAETSIT++D+V+V+D GK K +FD +++ LK WIS A+A QR+GRAGR
Sbjct: 685 ILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNSVTMLKMVWISKASAIQRKGRAGR 742
>gi|328862737|gb|EGG11837.1| hypothetical protein MELLADRAFT_76432 [Melampsora larici-populina
98AG31]
Length = 1308
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/123 (46%), Positives = 81/123 (65%), Gaps = 8/123 (6%)
Query: 189 ILVFLPGWDTINSLHRSMCQS--------SFFNSSRFQIIPLHSMLPTVSQKSIFNTPPE 240
+LVFLPGWD I + + + +F +SSRF++ LHS +P V Q+ +F P E
Sbjct: 629 VLVFLPGWDEIKGVQNILLDNVQFPLLGLNFNDSSRFEVHVLHSAIPVVDQQKVFTPPSE 688
Query: 241 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 300
GVR+I+L+TNIAETS+TI D+V+VVD GK K FD + ++++L W+ +N QR GR
Sbjct: 689 GVRRIILSTNIAETSVTIPDVVFVVDTGKIKEKRFDPERHLSSLVTAWVGTSNLNQRAGR 748
Query: 301 AGR 303
AGR
Sbjct: 749 AGR 751
>gi|431915942|gb|ELK16196.1| ATP-dependent RNA helicase A [Pteropus alecto]
Length = 1263
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 78/115 (67%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPGW+ I ++ + + + F S R+QI+PLHS +P Q+ +F+ P GV K++L+
Sbjct: 637 VLVFLPGWNLIYTMQKHLEMNPHFGSHRYQILPLHSQIPREEQRKVFDPVPGGVTKVILS 696
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+D+VYV+D K K+ F +N+ W S N +QR+GRAGR
Sbjct: 697 TNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGR 751
Score = 42.4 bits (98), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 30/44 (68%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
++I +LL++I T PGA+LVFLPGW+ I ++ + + + F S
Sbjct: 619 ELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHFGS 662
>gi|1806048|emb|CAA71668.1| nuclear DNA helicase II [Homo sapiens]
Length = 1270
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 79/116 (68%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPGW+ I ++ + + + F S R+QI+PLHS +P Q+ +F+ P GV K++L+
Sbjct: 653 VLVFLPGWNLIYTMQKHLEMNPHFGSHRYQILPLHSQIPREEQRKVFDPVPVGVTKVILS 712
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT 304
TNIAETSITI+D+VYV+D K K+ F +N+ W S N +QR+GRAGR+
Sbjct: 713 TNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYSTVWASKTNLEQRKGRAGRS 768
Score = 42.4 bits (98), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 30/44 (68%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
++I +LL++I T PGA+LVFLPGW+ I ++ + + + F S
Sbjct: 635 ELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHFGS 678
>gi|514801476|ref|XP_004975642.1| PREDICTED: ATP-dependent RNA helicase Dhx29-like isoform X1 [Setaria
italica]
gi|514801478|ref|XP_004975643.1| PREDICTED: ATP-dependent RNA helicase Dhx29-like isoform X2 [Setaria
italica]
gi|514801480|ref|XP_004975644.1| PREDICTED: ATP-dependent RNA helicase Dhx29-like isoform X3 [Setaria
italica]
gi|514801482|ref|XP_004975645.1| PREDICTED: ATP-dependent RNA helicase Dhx29-like isoform X4 [Setaria
italica]
Length = 1429
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/147 (44%), Positives = 91/147 (61%), Gaps = 11/147 (7%)
Query: 189 ILVFLPGWDTINSLHRSMCQS-SFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
+LVFLPG I+ L + S F +S I+PLHS+L Q+ +F +PP+ RK+++
Sbjct: 886 LLVFLPGVAEIDMLIDRLSASVRFGGASSDWILPLHSLLGPTDQRKVFQSPPDNFRKVIV 945
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR---- 303
AT+IAETSITIDD++YVVD GK K + ++ + ++++ +WIS ANAKQRRGRAGR
Sbjct: 946 ATDIAETSITIDDVIYVVDAGKHKQNRYNPRKKMSSIVEDWISRANAKQRRGRAGRVKPG 1005
Query: 304 ------TLKRSETQQYPNDVLNMLKDP 324
T R E P V ML+ P
Sbjct: 1006 LCFCLYTRHRFENTMRPFQVPEMLRMP 1032
Score = 45.8 bits (107), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 13/90 (14%)
Query: 31 AAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHLD 90
A KK++ K + Y +MLEAR LP + + L +++ N + V+SGETG G
Sbjct: 554 AILKKQLEDKRKLPNYLKMLEARASLPIAKQKQHFLQLLKENDVIVVSGETGCG------ 607
Query: 91 FITLKRSETQQYPNDVLNMLKDPELEGVNN 120
+T Q P +L+ + + EL G N
Sbjct: 608 -------KTTQVPQFILDDMIESELGGYCN 630
>gi|281427338|ref|NP_001163976.1| DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57 [Xenopus (Silurana)
tropicalis]
gi|183985762|gb|AAI66336.1| Unknown (protein for MGC:186162) [Xenopus (Silurana) tropicalis]
Length = 1180
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/118 (50%), Positives = 81/118 (68%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN---SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
+LVFLPG I +L+ + ++ FN S R I PLHS L + Q+S+F PP GV KI
Sbjct: 867 VLVFLPGLAEIKTLYDQLQSNALFNNRRSKRCVIYPLHSSLSSDEQQSVFLKPPPGVTKI 926
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+++TNIAETSITIDD+VYV+D GK + +D ++ +L+ W+S ANA QR+GRAGR
Sbjct: 927 IISTNIAETSITIDDVVYVIDSGKMREKRYDPGKSMESLEDTWVSRANAMQRKGRAGR 984
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 35/55 (63%)
Query: 30 DAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+A K K +R YQ MLE R+KLP++Q +D +L+++ Q+ V+SG TG G
Sbjct: 531 NAKICKHYRAKKTTRNYQSMLEERQKLPAWQKQDQILELLSKYQVLVVSGMTGCG 585
Score = 42.4 bits (98), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Query: 317 VLNMLKDPELEGVNNDVIFSLLQHICTTQR---PGAILVFLPGWDTINSLHRSMCQSSFF 373
V+ L +L+ +N D+I +LL+ I PGA+LVFLPG I +L+ + ++ F
Sbjct: 831 VIKTLSSMDLDKINLDLIEALLEWIVNGDHSYPPGAVLVFLPGLAEIKTLYDQLQSNALF 890
Query: 374 NS-----CLLY 379
N+ C++Y
Sbjct: 891 NNRRSKRCVIY 901
>gi|499045971|ref|XP_004573566.1| PREDICTED: ATP-dependent RNA helicase A-like protein-like
[Maylandia zebra]
Length = 1271
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 79/115 (68%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPGW+ I S+ R + + F S+R++I+PLHS +P Q+ +F P+ +RK++L+
Sbjct: 669 VLVFLPGWNLIYSMQRHLESNPHFGSNRYRILPLHSQIPREEQRRVFEPVPDDIRKVILS 728
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+D+VYV+D K K+ F +N+ W S N +QR+GRAGR
Sbjct: 729 TNIAETSITINDVVYVIDSCKQKVKLFTSHNNMTNYATVWASKTNLEQRKGRAGR 783
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 30/44 (68%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
+++ +LL++I T Q GA+LVFLPGW+ I S+ R + + F S
Sbjct: 651 ELVEALLKYIETLQVAGAVLVFLPGWNLIYSMQRHLESNPHFGS 694
>gi|194758212|ref|XP_001961356.1| GF13828 [Drosophila ananassae]
gi|190622654|gb|EDV38178.1| GF13828 [Drosophila ananassae]
Length = 1339
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/134 (48%), Positives = 90/134 (67%), Gaps = 9/134 (6%)
Query: 179 KLLRSMLV------VP--ILVFLPGWDTINSLHRSMCQS-SFFNSSRFQIIPLHSMLPTV 229
+LL S+LV +P ILVFLPGW+ I +L + + S +F NSS+++I+P HS +P
Sbjct: 642 ELLESLLVHIKSKNIPGAILVFLPGWNLIFALMKFLQSSNTFGNSSQYRILPCHSQIPRD 701
Query: 230 SQKSIFNTPPEGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWI 289
Q+ +F P+GV KI+L+TNIAETSITIDDIV+VVD K +M F +N+ + W
Sbjct: 702 DQRKVFEQVPDGVTKIILSTNIAETSITIDDIVFVVDICKARMKLFTSHNNLTSYATVWA 761
Query: 290 SLANAKQRRGRAGR 303
S N +QR+GRAGR
Sbjct: 762 SKTNLEQRKGRAGR 775
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
Query: 312 QYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSS 371
Q + + ML + + V+ +++ SLL HI + PGAILVFLPGW+ I +L + + S+
Sbjct: 625 QQTRNAMAMLSESD---VSFELLESLLVHIKSKNIPGAILVFLPGWNLIFALMKFLQSSN 681
Query: 372 FFNSCLLY 379
F + Y
Sbjct: 682 TFGNSSQY 689
Score = 42.7 bits (99), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 29 LDAAFKKEMI-RKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
L A F++ + R+L Y++ LE R KLP MR +L + N + +I G TG G
Sbjct: 359 LSADFERSLRERRLNDAEYRQFLEFRDKLPIAAMRSEILSAINENPVVIIRGNTGCG 415
>gi|307383|gb|AAB48855.1| RNA helicase A [Homo sapiens]
Length = 1279
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 79/116 (68%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPGW+ I ++ + + + F S R+QI+PLHS +P Q+ +F+ P GV K++L+
Sbjct: 652 VLVFLPGWNLIYTMQKHLEMNPHFGSHRYQILPLHSQIPREEQRKVFDPVPVGVTKVILS 711
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT 304
TNIAETSITI+D+VYV+D K K+ F +N+ W S N +QR+GRAGR+
Sbjct: 712 TNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYSTVWASKTNLEQRKGRAGRS 767
Score = 42.4 bits (98), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 30/44 (68%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
++I +LL++I T PGA+LVFLPGW+ I ++ + + + F S
Sbjct: 634 ELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHFGS 677
>gi|478501392|ref|XP_004425008.1| PREDICTED: ATP-dependent RNA helicase A isoform 1 [Ceratotherium
simum simum]
Length = 1280
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 78/115 (67%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPGW+ I ++ + + + F S R+QI+PLHS +P Q+ +F+ P GV K++L+
Sbjct: 654 VLVFLPGWNLIYTMQKHLEMNPHFGSHRYQILPLHSQIPREEQRKVFDPVPGGVTKVILS 713
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+D+VYV+D K K+ F +N+ W S N +QR+GRAGR
Sbjct: 714 TNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGR 768
Score = 42.4 bits (98), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 30/44 (68%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
++I +LL++I T PGA+LVFLPGW+ I ++ + + + F S
Sbjct: 636 ELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHFGS 679
>gi|478501394|ref|XP_004425009.1| PREDICTED: ATP-dependent RNA helicase A isoform 2 [Ceratotherium
simum simum]
Length = 1065
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 78/116 (67%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPGW+ I ++ + + + F S R+QI+PLHS +P Q+ +F+ P GV K++L+
Sbjct: 439 VLVFLPGWNLIYTMQKHLEMNPHFGSHRYQILPLHSQIPREEQRKVFDPVPGGVTKVILS 498
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT 304
TNIAETSITI+D+VYV+D K K+ F +N+ W S N +QR+GRAGR
Sbjct: 499 TNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRV 554
Score = 42.4 bits (98), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 30/44 (68%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
++I +LL++I T PGA+LVFLPGW+ I ++ + + + F S
Sbjct: 421 ELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHFGS 464
>gi|1082769|pir||A47363 RNA helicase A - human
Length = 1279
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 79/116 (68%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPGW+ I ++ + + + F S R+QI+PLHS +P Q+ +F+ P GV K++L+
Sbjct: 652 VLVFLPGWNLIYTMQKHLEMNPHFGSHRYQILPLHSQIPREEQRKVFDPVPVGVTKVILS 711
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT 304
TNIAETSITI+D+VYV+D K K+ F +N+ W S N +QR+GRAGR+
Sbjct: 712 TNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYSTVWASKTNLEQRKGRAGRS 767
Score = 42.4 bits (98), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 30/44 (68%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
++I +LL++I T PGA+LVFLPGW+ I ++ + + + F S
Sbjct: 634 ELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHFGS 677
>gi|498945349|ref|XP_004542827.1| PREDICTED: putative ATP-dependent RNA helicase DHX30-like
[Maylandia zebra]
Length = 1123
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/115 (49%), Positives = 75/115 (65%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+L FLPGW I ++ + + F+S I+PLHS L Q+++F P G RKIVLA
Sbjct: 602 VLCFLPGWQDIKAVQEKLEEKPRFSSGSQMILPLHSSLSVADQQAVFQHPQVGQRKIVLA 661
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETS+TIDDIV+VVD G K N+D + ++ L WIS +N QR+GRAGR
Sbjct: 662 TNIAETSVTIDDIVHVVDAGTHKEQNYDPRTKVSCLDTVWISRSNVTQRKGRAGR 716
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 26/44 (59%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
D++ +++HI PGA+L FLPGW I ++ + + F+S
Sbjct: 584 DLVADVIEHIDRCGEPGAVLCFLPGWQDIKAVQEKLEEKPRFSS 627
>gi|390340054|ref|XP_003725156.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase A-like
protein-like [Strongylocentrotus purpuratus]
Length = 1291
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 75/115 (65%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW+ I +L R + + F F I+PLHS +P Q +F+T PEGV KI+L+
Sbjct: 564 ILFFLPGWNWIFALMRHLQEHPKFGGRDFCILPLHSQIPKEEQHRVFDTMPEGVTKIILS 623
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+D+VYVVD K KM F +N+ W S N +QRRGRAGR
Sbjct: 624 TNIAETSITINDVVYVVDICKAKMKLFTSHNNMTNYAIVWASKTNLEQRRGRAGR 678
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 3/83 (3%)
Query: 299 GRAGRTLKRSETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWD 358
G + ++ + +Y L + +N D+I SLL +I T PGAIL FLPGW+
Sbjct: 513 GEGEENMNKNISHEYSEQTRRALMQMSEKEMNFDLIESLLTYIGTLGVPGAILFFLPGWN 572
Query: 359 TINSLHRSMCQSSFFNS---CLL 378
I +L R + + F C+L
Sbjct: 573 WIFALMRHLQEHPKFGGRDFCIL 595
>gi|507965222|ref|XP_004688605.1| PREDICTED: ATP-dependent RNA helicase A isoform X1 [Condylura
cristata]
Length = 1269
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 78/115 (67%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPGW+ I ++ + + + F S R+QI+PLHS +P Q+ +F+ P GV K++L+
Sbjct: 654 VLVFLPGWNLIYTMQKHLEMNPHFGSHRYQILPLHSQIPREEQRKVFDPVPVGVTKVILS 713
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+D+VYV+D K K+ F +N+ W S N +QR+GRAGR
Sbjct: 714 TNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGR 768
Score = 42.4 bits (98), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 30/44 (68%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
++I +LL++I T PGA+LVFLPGW+ I ++ + + + F S
Sbjct: 636 ELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHFGS 679
>gi|507965225|ref|XP_004688606.1| PREDICTED: ATP-dependent RNA helicase A isoform X2 [Condylura
cristata]
Length = 1054
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 78/116 (67%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPGW+ I ++ + + + F S R+QI+PLHS +P Q+ +F+ P GV K++L+
Sbjct: 439 VLVFLPGWNLIYTMQKHLEMNPHFGSHRYQILPLHSQIPREEQRKVFDPVPVGVTKVILS 498
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT 304
TNIAETSITI+D+VYV+D K K+ F +N+ W S N +QR+GRAGR
Sbjct: 499 TNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRV 554
Score = 42.0 bits (97), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 30/44 (68%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
++I +LL++I T PGA+LVFLPGW+ I ++ + + + F S
Sbjct: 421 ELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHFGS 464
>gi|443689623|gb|ELT91988.1| hypothetical protein CAPTEDRAFT_154310 [Capitella teleta]
Length = 889
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/105 (55%), Positives = 77/105 (73%), Gaps = 2/105 (1%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVF+PGW I + +++ IIPLHS+LPT +QK +FN P +GVRKI++A
Sbjct: 571 ILVFMPGWMEIKKTKEEL--EKVLSAANTLIIPLHSLLPTCNQKEVFNRPRQGVRKIIIA 628
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLAN 293
T+IAETSITIDDIVYVV+ GK+KM +FD + NIATL+ W+S A+
Sbjct: 629 TSIAETSITIDDIVYVVNSGKSKMKDFDPESNIATLQTAWLSRAS 673
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 49/73 (67%), Gaps = 3/73 (4%)
Query: 12 HSVTSWETRQKLLNDPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRN 71
HS ++E + +P+LD F++E+ K Q+R+Y+E+ RKKL +++M+ ++D +
Sbjct: 251 HSTNAYEP---VPAEPLLDHQFEEELKVKKQNRQYKEIFNLRKKLKAFKMKKDIVDTINK 307
Query: 72 NQITVISGETGSG 84
NQ+ VISG+TG G
Sbjct: 308 NQVVVISGDTGCG 320
>gi|395334327|gb|EJF66703.1| P-loop containing nucleoside triphosphate hydrolase protein
[Dichomitus squalens LYAD-421 SS1]
Length = 1278
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/123 (45%), Positives = 81/123 (65%), Gaps = 8/123 (6%)
Query: 189 ILVFLPGWDTINSLHRSMCQS--------SFFNSSRFQIIPLHSMLPTVSQKSIFNTPPE 240
+LVFLPGWD I+++ R + + +F ++S+F I LHS +P Q++IF+ PP
Sbjct: 648 VLVFLPGWDDISAVRRFLLEGDRSKPLGFNFGDTSKFSIHLLHSTIPVAEQQAIFDPPPP 707
Query: 241 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 300
GVR+I+L+TNIAETS+TI D+VYVVD + K +D +I+ L W+ +N QR GR
Sbjct: 708 GVRRIILSTNIAETSVTIPDVVYVVDTARIKEQRYDPARHISNLVSAWVGTSNLNQRAGR 767
Query: 301 AGR 303
AGR
Sbjct: 768 AGR 770
>gi|384493804|gb|EIE84295.1| hypothetical protein RO3G_09005 [Rhizopus delemar RA 99-880]
Length = 1377
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 104/204 (50%), Gaps = 36/204 (17%)
Query: 101 QYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVYCTYTFMGVSPMKVFFCKN 160
+Y M+K + + +N D+I LL+HIC Q+P
Sbjct: 857 EYSRQTRKMIKRMDDKKINYDLILQLLEHICI-QKPA----------------------- 892
Query: 161 VLQRLMKGVGANSPKRWVKLLRSMLVVPILVFLPGWDTINSLHRSMCQSSFFN-SSRFQI 219
NS + + S ILVFLPG + I +L+ + + F + +F +
Sbjct: 893 ---------DENSTDKKESAIPS--TGAILVFLPGMNEIRALYDLVSSHNIFGKTEKFLL 941
Query: 220 IPLHSMLPTVSQKSIFNTPPEGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKD 279
IPLHS L + Q+ F PPEGVRKIV +TNIAET +TI D+ V+D G + N+D K
Sbjct: 942 IPLHSTLSSDHQEKAFEVPPEGVRKIVFSTNIAETGVTISDVTVVIDTGMARTINYDDKR 1001
Query: 280 NIATLKPEWISLANAKQRRGRAGR 303
++ L ++++ ANAKQRRGRAGR
Sbjct: 1002 RVSRLLQKYVAKANAKQRRGRAGR 1025
Score = 45.1 bits (105), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 29/46 (63%)
Query: 39 RKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
++L S+ Y M E R LP R +L++V+ NQ+ +ISGETG G
Sbjct: 593 KRLNSKDYMSMKEKRGDLPIAAYRKDILELVKKNQVLIISGETGCG 638
Score = 42.7 bits (99), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 53/131 (40%), Gaps = 38/131 (29%)
Query: 259 DDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRSETQQYPNDVL 318
DDI + K +SN +V +NI E + +Y
Sbjct: 825 DDIYNTSNDSKLTISNNEVTENINESDNE---------------------DESEYSRQTR 863
Query: 319 NMLKDPELEGVNNDVIFSLLQHICTTQRP----------------GAILVFLPGWDTINS 362
M+K + + +N D+I LL+HIC Q+P GAILVFLPG + I +
Sbjct: 864 KMIKRMDDKKINYDLILQLLEHIC-IQKPADENSTDKKESAIPSTGAILVFLPGMNEIRA 922
Query: 363 LHRSMCQSSFF 373
L+ + + F
Sbjct: 923 LYDLVSSHNIF 933
>gi|488557157|ref|XP_004469166.1| PREDICTED: ATP-dependent RNA helicase A-like [Dasypus novemcinctus]
Length = 1264
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 78/115 (67%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPGW+ I ++ + + + F S R+QI+PLHS +P Q+ +F+ P GV K++L+
Sbjct: 651 VLVFLPGWNLIYTMQKHLEMNPHFGSHRYQILPLHSQIPREEQRKVFDPVPVGVTKVILS 710
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+D+VYV+D K K+ F +N+ W S N +QR+GRAGR
Sbjct: 711 TNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGR 765
Score = 42.4 bits (98), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 30/44 (68%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
++I +LL++I T PGA+LVFLPGW+ I ++ + + + F S
Sbjct: 633 ELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHFGS 676
>gi|297662534|ref|XP_002809755.1| PREDICTED: ATP-dependent RNA helicase A [Pongo abelii]
gi|71153339|sp|Q5R874.1|DHX9_PONAB RecName: Full=ATP-dependent RNA helicase A; Short=RHA; AltName:
Full=DEAH box protein 9; AltName: Full=Nuclear DNA
helicase II; Short=NDH II
gi|55730630|emb|CAH92036.1| hypothetical protein [Pongo abelii]
Length = 1269
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 78/115 (67%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPGW+ I ++ + + + F S R+QI+PLHS +P Q+ +F+ P GV K++L+
Sbjct: 653 VLVFLPGWNLIYTMQKHLEMNPHFGSHRYQILPLHSQIPREEQRKVFDPVPVGVTKVILS 712
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+D+VYV+D K K+ F +N+ W S N +QR+GRAGR
Sbjct: 713 TNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGR 767
Score = 42.4 bits (98), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 30/44 (68%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
++I +LL++I T PGA+LVFLPGW+ I ++ + + + F S
Sbjct: 635 ELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHFGS 678
>gi|100913206|ref|NP_001348.2| ATP-dependent RNA helicase A [Homo sapiens]
gi|332811349|ref|XP_003308679.1| PREDICTED: ATP-dependent RNA helicase A isoform 1 [Pan troglodytes]
gi|397508714|ref|XP_003824791.1| PREDICTED: ATP-dependent RNA helicase A [Pan paniscus]
gi|116241330|sp|Q08211.4|DHX9_HUMAN RecName: Full=ATP-dependent RNA helicase A; Short=RHA; AltName:
Full=DEAH box protein 9; AltName: Full=Leukophysin;
Short=LKP; AltName: Full=Nuclear DNA helicase II;
Short=NDH II
gi|119611544|gb|EAW91138.1| DEAH (Asp-Glu-Ala-His) box polypeptide 9, isoform CRA_b [Homo
sapiens]
gi|187952519|gb|AAI37137.1| DEAH (Asp-Glu-Ala-His) box polypeptide 9 [Homo sapiens]
gi|255652739|dbj|BAH90798.1| DEAH (Asp-Glu-Ala-His) box polypeptide 9, partial [synthetic
construct]
Length = 1270
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 78/115 (67%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPGW+ I ++ + + + F S R+QI+PLHS +P Q+ +F+ P GV K++L+
Sbjct: 653 VLVFLPGWNLIYTMQKHLEMNPHFGSHRYQILPLHSQIPREEQRKVFDPVPVGVTKVILS 712
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+D+VYV+D K K+ F +N+ W S N +QR+GRAGR
Sbjct: 713 TNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGR 767
Score = 42.4 bits (98), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 30/44 (68%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
++I +LL++I T PGA+LVFLPGW+ I ++ + + + F S
Sbjct: 635 ELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHFGS 678
>gi|224113343|ref|XP_002316463.1| predicted protein [Populus trichocarpa]
gi|222865503|gb|EEF02634.1| predicted protein [Populus trichocarpa]
Length = 1077
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/167 (41%), Positives = 94/167 (56%), Gaps = 2/167 (1%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNS-SRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
+LVF+ GW+ I+SL + +R ++ H + T QK IF PP VRKIVL
Sbjct: 461 VLVFMTGWEDISSLRDQLKAHPLLGDPNRVLLVTCHGSMATSEQKLIFEKPPPNVRKIVL 520
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKR 307
ATN+AE SITI+DIV+VVDCGK K + +D +N L P WIS A+A+QR+GRAGR
Sbjct: 521 ATNMAEASITINDIVFVVDCGKAKETTYDALNNTPCLLPSWISKASARQRKGRAGRVQPG 580
Query: 308 SETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFL 354
YP V + +L + + SL I + Q G+I FL
Sbjct: 581 ECYHLYPRCVYEAFAEYQLPELLRTPLNSLCLQIKSLQ-VGSIGEFL 626
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 29/40 (72%), Gaps = 2/40 (5%)
Query: 324 PELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSL 363
P+ G N +I ++L HIC +RPGA+LVF+ GW+ I+SL
Sbjct: 437 PDCIGFN--LIEAVLCHICRKERPGAVLVFMTGWEDISSL 474
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 11/90 (12%)
Query: 11 THSVTSWETRQKLLNDPVLDAAFKKEMIRKL-----------QSRRYQEMLEARKKLPSY 59
T ++ E + L+ V++ ++ +R L +S ++M++ RK LP++
Sbjct: 123 TGDISLDENKDSFLDRSVMERVLQRRSLRMLHVCRGGDDENYESPEGRKMMDFRKSLPAF 182
Query: 60 QMRDAVLDMVRNNQITVISGETGSGPPLHL 89
+ ++ +L + NQ+ VISGETG G L
Sbjct: 183 KEKERLLQAIAKNQVIVISGETGCGKTTQL 212
>gi|119611543|gb|EAW91137.1| DEAH (Asp-Glu-Ala-His) box polypeptide 9, isoform CRA_a [Homo
sapiens]
Length = 1014
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 78/115 (67%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPGW+ I ++ + + + F S R+QI+PLHS +P Q+ +F+ P GV K++L+
Sbjct: 666 VLVFLPGWNLIYTMQKHLEMNPHFGSHRYQILPLHSQIPREEQRKVFDPVPVGVTKVILS 725
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+D+VYV+D K K+ F +N+ W S N +QR+GRAGR
Sbjct: 726 TNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGR 780
Score = 42.4 bits (98), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 30/44 (68%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
++I +LL++I T PGA+LVFLPGW+ I ++ + + + F S
Sbjct: 648 ELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHFGS 691
>gi|426332974|ref|XP_004028065.1| PREDICTED: ATP-dependent RNA helicase A isoform 1 [Gorilla gorilla
gorilla]
Length = 1270
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 78/115 (67%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPGW+ I ++ + + + F S R+QI+PLHS +P Q+ +F+ P GV K++L+
Sbjct: 653 VLVFLPGWNLIYTMQKHLEMNPHFGSHRYQILPLHSQIPREEQRKVFDPVPVGVTKVILS 712
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+D+VYV+D K K+ F +N+ W S N +QR+GRAGR
Sbjct: 713 TNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGR 767
Score = 42.4 bits (98), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 30/44 (68%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
++I +LL++I T PGA+LVFLPGW+ I ++ + + + F S
Sbjct: 635 ELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHFGS 678
>gi|402857890|ref|XP_003893470.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase A,
partial [Papio anubis]
Length = 1202
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 78/115 (67%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPGW+ I ++ + + + F S R+QI+PLHS +P Q+ +F+ P GV K++L+
Sbjct: 569 VLVFLPGWNLIYTMQKHLEMNPHFGSHRYQILPLHSQIPREEQRKVFDPVPVGVTKVILS 628
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+D+VYV+D K K+ F +N+ W S N +QR+GRAGR
Sbjct: 629 TNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGR 683
Score = 42.4 bits (98), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 30/44 (68%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
++I +LL++I T PGA+LVFLPGW+ I ++ + + + F S
Sbjct: 551 ELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHFGS 594
>gi|401422232|ref|XP_003875604.1| putative ATP-dependent DEAD/H RNA helicase [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322491842|emb|CBZ27115.1| putative ATP-dependent DEAD/H RNA helicase [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 1087
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/118 (52%), Positives = 77/118 (65%), Gaps = 2/118 (1%)
Query: 186 VVPILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
V ILVFLPGW I+ + + +S F + I+ LHS L T Q+ +F PP+ RKI
Sbjct: 413 VESILVFLPGWAAISCIANRLKRSQF--ARELSILMLHSSLTTAEQQRVFERPPKHYRKI 470
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
VLAT+IAETSITIDDIVYV+DCG K +++D N + LK I AN QRRGRAGR
Sbjct: 471 VLATSIAETSITIDDIVYVIDCGLVKGTSYDPMGNTSALKATLIGKANGVQRRGRAGR 528
>gi|388454543|ref|NP_001253117.1| ATP-dependent RNA helicase A [Macaca mulatta]
Length = 1275
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 78/115 (67%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPGW+ I ++ + + + F S R+QI+PLHS +P Q+ +F+ P GV K++L+
Sbjct: 653 VLVFLPGWNLIYTMQKHLEMNPHFGSHRYQILPLHSQIPREEQRKVFDPVPVGVTKVILS 712
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+D+VYV+D K K+ F +N+ W S N +QR+GRAGR
Sbjct: 713 TNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGR 767
Score = 42.4 bits (98), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 30/44 (68%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
++I +LL++I T PGA+LVFLPGW+ I ++ + + + F S
Sbjct: 635 ELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHFGS 678
>gi|170031307|ref|XP_001843527.1| ATP-dependent RNA helicase A [Culex quinquefasciatus]
gi|167869787|gb|EDS33170.1| ATP-dependent RNA helicase A [Culex quinquefasciatus]
Length = 1286
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/120 (47%), Positives = 79/120 (65%), Gaps = 3/120 (2%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN---SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
IL+FLPG I ++H ++ S F ++ ++PLHS L Q +F P+G RKI
Sbjct: 753 ILIFLPGLAEIQTIHEALSDSRQFGPRGEGKYVLVPLHSTLTNEEQALVFKKAPKGKRKI 812
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTL 305
VL+TNIAETS+TIDD V+V+DCG+ K FD N+ +L+ W+S ANA QR+GRAGR +
Sbjct: 813 VLSTNIAETSVTIDDCVFVLDCGQMKEKRFDSNRNMESLEVVWVSRANALQRKGRAGRVM 872
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 17/103 (16%)
Query: 35 KEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHLDFITL 94
K+ + K + Y+EML RK+LP++ ++ + + I VISGETG G
Sbjct: 427 KKFLDKQNNATYKEMLRGRKQLPAWSKMSEIIHALEMHSILVISGETGCG---------- 476
Query: 95 KRSETQQYPNDVLN--MLKDPELEGVNNDVIFSLLQHICTTQR 135
++ Q P +L+ +L+ +L+ N V ++ ICT R
Sbjct: 477 ---KSTQVPQFILDNWLLQSSQLDNGNGSV--PHVEIICTQPR 514
>gi|355746108|gb|EHH50733.1| hypothetical protein EGM_01605 [Macaca fascicularis]
Length = 1275
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 78/115 (67%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPGW+ I ++ + + + F S R+QI+PLHS +P Q+ +F+ P GV K++L+
Sbjct: 653 VLVFLPGWNLIYTMQKHLEMNPHFGSHRYQILPLHSQIPREEQRKVFDPVPVGVTKVILS 712
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+D+VYV+D K K+ F +N+ W S N +QR+GRAGR
Sbjct: 713 TNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGR 767
Score = 42.4 bits (98), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 30/44 (68%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
++I +LL++I T PGA+LVFLPGW+ I ++ + + + F S
Sbjct: 635 ELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHFGS 678
>gi|296229583|ref|XP_002760334.1| PREDICTED: ATP-dependent RNA helicase A isoform 2 [Callithrix
jacchus]
Length = 1270
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 78/115 (67%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPGW+ I ++ + + + F S R+QI+PLHS +P Q+ +F+ P GV K++L+
Sbjct: 653 VLVFLPGWNLIYTMQKHLEMNPHFGSHRYQILPLHSQIPREEQRKVFDPVPVGVTKVILS 712
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+D+VYV+D K K+ F +N+ W S N +QR+GRAGR
Sbjct: 713 TNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGR 767
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 30/44 (68%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
++I SLL++I T PGA+LVFLPGW+ I ++ + + + F S
Sbjct: 635 ELIESLLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHFGS 678
>gi|291231421|ref|XP_002735666.1| PREDICTED: DEAH (Asp-Glu-Ala-His) box polypeptide 30-like
[Saccoglossus kowalevskii]
Length = 893
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/230 (36%), Positives = 122/230 (53%), Gaps = 31/230 (13%)
Query: 92 ITLKRSETQQYPNDVLNMLKDPELE-GVNNDVIFSLLQHICTTQRPGAILVYCTYTFMGV 150
I LK+ ++ N V +++ D E VN D + LL+ PG L+Y
Sbjct: 271 ILLKKIQSNPSLNGVTHVIVDEVHERDVNTDFLLILLKDCPIISVPG--LMY-------- 320
Query: 151 SPMKVFFCKNVLQRLMKGV----GANSPK------RWVKLLRSMLVV-------PILVFL 193
P+K +F ++V R++ V G P W + R + + IL FL
Sbjct: 321 -PVKEYFLEDVF-RMVGDVQRRNGNGRPSFDKPDTNWEMVSRVIEYIDTNKPHGAILCFL 378
Query: 194 PGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLATNIAE 253
PGW I ++ R+ Q + + I P+HS +P Q++IF PPEGVRK+VLATNIAE
Sbjct: 379 PGWQDIVAV-RNRLQELWPSQDLHWIFPVHSSVPMSQQQAIFEKPPEGVRKVVLATNIAE 437
Query: 254 TSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TSITI+D+VYVV+ G K ++++ + L WIS AN +QR+GRAGR
Sbjct: 438 TSITINDVVYVVNVGNHKELRYNIETGTSCLDVHWISRANVRQRKGRAGR 487
>gi|73960445|ref|XP_537154.2| PREDICTED: ATP-dependent RNA helicase A isoform 1 [Canis lupus
familiaris]
Length = 1276
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 78/115 (67%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPGW+ I ++ + + + F S R+QI+PLHS +P Q+ +F+ P GV K++L+
Sbjct: 654 VLVFLPGWNLIYTMQKHLEMNPDFGSHRYQILPLHSQIPREEQRKVFDPVPAGVTKVILS 713
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+D+VYV+D K K+ F +N+ W S N +QR+GRAGR
Sbjct: 714 TNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGR 768
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 30/44 (68%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
++I +LL++I T PGA+LVFLPGW+ I ++ + + + F S
Sbjct: 636 ELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPDFGS 679
>gi|332230603|ref|XP_003264483.1| PREDICTED: ATP-dependent RNA helicase A isoform 1 [Nomascus
leucogenys]
Length = 1270
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 78/115 (67%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPGW+ I ++ + + + F S R+QI+PLHS +P Q+ +F+ P GV K++L+
Sbjct: 653 VLVFLPGWNLIYTMQKHLEMNPHFGSHRYQILPLHSQIPREEQRKVFDPVPVGVTKVILS 712
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+D+VYV+D K K+ F +N+ W S N +QR+GRAGR
Sbjct: 713 TNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGR 767
Score = 42.4 bits (98), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 30/44 (68%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
++I +LL++I T PGA+LVFLPGW+ I ++ + + + F S
Sbjct: 635 ELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHFGS 678
>gi|426332976|ref|XP_004028066.1| PREDICTED: ATP-dependent RNA helicase A isoform 2 [Gorilla gorilla
gorilla]
Length = 1056
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 78/116 (67%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPGW+ I ++ + + + F S R+QI+PLHS +P Q+ +F+ P GV K++L+
Sbjct: 439 VLVFLPGWNLIYTMQKHLEMNPHFGSHRYQILPLHSQIPREEQRKVFDPVPVGVTKVILS 498
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT 304
TNIAETSITI+D+VYV+D K K+ F +N+ W S N +QR+GRAGR
Sbjct: 499 TNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRV 554
Score = 42.0 bits (97), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 30/44 (68%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
++I +LL++I T PGA+LVFLPGW+ I ++ + + + F S
Sbjct: 421 ELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHFGS 464
>gi|403266627|ref|XP_003925470.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase A
[Saimiri boliviensis boliviensis]
Length = 1243
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 78/115 (67%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPGW+ I ++ + + + F S R+QI+PLHS +P Q+ +F+ P GV K++L+
Sbjct: 619 VLVFLPGWNLIYTMQKHLEMNPHFGSHRYQILPLHSQIPREEQRKVFDPVPVGVTKVILS 678
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+D+VYV+D K K+ F +N+ W S N +QR+GRAGR
Sbjct: 679 TNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGR 733
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 30/44 (68%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
++I SLL++I T PGA+LVFLPGW+ I ++ + + + F S
Sbjct: 601 ELIESLLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHFGS 644
>gi|332811351|ref|XP_003308680.1| PREDICTED: ATP-dependent RNA helicase A isoform 2 [Pan troglodytes]
Length = 1056
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 78/116 (67%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPGW+ I ++ + + + F S R+QI+PLHS +P Q+ +F+ P GV K++L+
Sbjct: 439 VLVFLPGWNLIYTMQKHLEMNPHFGSHRYQILPLHSQIPREEQRKVFDPVPVGVTKVILS 498
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT 304
TNIAETSITI+D+VYV+D K K+ F +N+ W S N +QR+GRAGR
Sbjct: 499 TNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRV 554
Score = 42.4 bits (98), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 30/44 (68%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
++I +LL++I T PGA+LVFLPGW+ I ++ + + + F S
Sbjct: 421 ELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHFGS 464
>gi|355558958|gb|EHH15738.1| hypothetical protein EGK_01870 [Macaca mulatta]
Length = 1378
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 78/115 (67%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPGW+ I ++ + + + F S R+QI+PLHS +P Q+ +F+ P GV K++L+
Sbjct: 718 VLVFLPGWNLIYTMQKHLEMNPHFGSHRYQILPLHSQIPREEQRKVFDPVPVGVTKVILS 777
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+D+VYV+D K K+ F +N+ W S N +QR+GRAGR
Sbjct: 778 TNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGR 832
Score = 42.4 bits (98), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 30/44 (68%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
++I +LL++I T PGA+LVFLPGW+ I ++ + + + F S
Sbjct: 700 ELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHFGS 743
>gi|224010551|ref|XP_002294233.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220970250|gb|EED88588.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 568
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/116 (47%), Positives = 82/116 (70%), Gaps = 1/116 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSS-FFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVF PGW I+ + + F + ++F ++PLHS +P+ Q+ +F PP GVRKI+L
Sbjct: 322 ILVFFPGWGEISEFSLLLDSTPPFSDRTKFSVLPLHSGIPSKDQRQVFIRPPVGVRKIIL 381
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
ATNIAETS+TI+D+ +V+D G++K ++D +TL+ WIS A+AKQR+GRAG+
Sbjct: 382 ATNIAETSLTIEDVAFVLDTGRSKEKSYDPHLKTSTLQESWISQASAKQRKGRAGK 437
>gi|332230605|ref|XP_003264484.1| PREDICTED: ATP-dependent RNA helicase A isoform 2 [Nomascus
leucogenys]
Length = 1056
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 78/116 (67%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPGW+ I ++ + + + F S R+QI+PLHS +P Q+ +F+ P GV K++L+
Sbjct: 439 VLVFLPGWNLIYTMQKHLEMNPHFGSHRYQILPLHSQIPREEQRKVFDPVPVGVTKVILS 498
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT 304
TNIAETSITI+D+VYV+D K K+ F +N+ W S N +QR+GRAGR
Sbjct: 499 TNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRV 554
Score = 42.0 bits (97), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 30/44 (68%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
++I +LL++I T PGA+LVFLPGW+ I ++ + + + F S
Sbjct: 421 ELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHFGS 464
>gi|15217831|ref|NP_176102.1| RNA helicase family protein [Arabidopsis thaliana]
gi|12321256|gb|AAG50700.1|AC079604_7 hypothetical protein [Arabidopsis thaliana]
gi|332195370|gb|AEE33491.1| RNA helicase family protein [Arabidopsis thaliana]
Length = 1417
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/150 (43%), Positives = 92/150 (61%), Gaps = 11/150 (7%)
Query: 189 ILVFLPGWDTINSL-HRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFLPG IN L +R F +S ++PLHS + + QK +F PP+G+RK+++
Sbjct: 885 ILVFLPGMSEINMLLNRLAASYRFRGASGDWLLPLHSSIASTEQKKVFLRPPKGIRKVII 944
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR---- 303
ATNIAETSITI+D+VYV+D GK K + ++ ++++ +W+S ANA+QR GRAGR
Sbjct: 945 ATNIAETSITIEDVVYVIDSGKHKENRYNPHKKLSSMVEDWVSKANARQRMGRAGRVKPG 1004
Query: 304 ------TLKRSETQQYPNDVLNMLKDPELE 327
T R E P V ML+ P +E
Sbjct: 1005 HCFSLYTRHRFEKLMRPYQVPEMLRVPLVE 1034
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 52/105 (49%), Gaps = 14/105 (13%)
Query: 31 AAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHLD 90
++ K++ K + ++Y++ML+ R LP +++ +L ++ + V+ GETGSG
Sbjct: 572 SSLKQKQENKKKMQKYKDMLKTRAALPISEVKKDILQKLKEKDVLVVCGETGSG------ 625
Query: 91 FITLKRSETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQR 135
+T Q P +L+ + D G N +I + + I QR
Sbjct: 626 -------KTTQVPQFILDDMIDSGHGGYCN-IICTQPRAITVAQR 662
>gi|395530934|ref|XP_003767541.1| PREDICTED: ATP-dependent RNA helicase A [Sarcophilus harrisii]
Length = 1260
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 78/115 (67%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPGW+ I ++ + + + F S R++I+PLHS +P Q+ +F+ P GV K++L+
Sbjct: 656 VLVFLPGWNLIYTMQKHLEMNPHFGSHRYRILPLHSQIPREEQRKVFDPVPNGVTKVILS 715
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+D+VYVVD K K+ F +N+ W S N +QR+GRAGR
Sbjct: 716 TNIAETSITINDVVYVVDSCKQKVKLFTAHNNMTNYATVWASRTNLEQRKGRAGR 770
Score = 42.4 bits (98), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 30/44 (68%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
++I +LL++I T PGA+LVFLPGW+ I ++ + + + F S
Sbjct: 638 ELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHFGS 681
>gi|357440091|ref|XP_003590323.1| ATP-dependent RNA helicase Dhx29 [Medicago truncatula]
gi|355479371|gb|AES60574.1| ATP-dependent RNA helicase Dhx29 [Medicago truncatula]
Length = 1100
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/106 (52%), Positives = 76/106 (71%), Gaps = 1/106 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFL GWD I+ L + ++ N S+F I+P+H +PT+ Q IF+ PP RKIVL
Sbjct: 549 ILVFLTGWDEISKLFEELEKNYLLGNRSKFLILPIHGSMPTIDQCEIFDRPPPNKRKIVL 608
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLAN 293
ATNIAE+SITIDD+VYV+DCGK K +++D + +A+L P WIS A+
Sbjct: 609 ATNIAESSITIDDVVYVIDCGKAKETSYDALNKLASLLPSWISKAS 654
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 38 IRKLQ-SRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHL 89
I LQ S +EM R+KLP+++M+ L V+ NQ+ V+SGETG G L
Sbjct: 253 IENLQASGSLKEMKSFREKLPAFKMKSEFLKAVQGNQVLVVSGETGCGKTTQL 305
>gi|444730524|gb|ELW70906.1| ATP-dependent RNA helicase A [Tupaia chinensis]
Length = 1489
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 78/115 (67%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPGW+ I ++ + + + F S R+QI+PLHS +P Q+ +F+ P GV K++L+
Sbjct: 756 VLVFLPGWNLIYTMQKHLEMNPHFGSHRYQILPLHSQIPREEQRKVFDPVPVGVTKVILS 815
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+D+VYV+D K K+ F +N+ W S N +QR+GRAGR
Sbjct: 816 TNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGR 870
Score = 42.4 bits (98), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 30/44 (68%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
++I +LL++I T PGA+LVFLPGW+ I ++ + + + F S
Sbjct: 738 ELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHFGS 781
>gi|126306309|ref|XP_001366536.1| PREDICTED: ATP-dependent RNA helicase A [Monodelphis domestica]
Length = 1256
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 78/115 (67%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPGW+ I ++ + + + F S R++I+PLHS +P Q+ +F+ P GV K++L+
Sbjct: 655 VLVFLPGWNLIYTMQKHLEMNPHFGSHRYRILPLHSQIPREEQRKVFDPVPTGVTKVILS 714
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+D+VYVVD K K+ F +N+ W S N +QR+GRAGR
Sbjct: 715 TNIAETSITINDVVYVVDSCKQKVKLFTAHNNMTNYATVWASRTNLEQRKGRAGR 769
Score = 42.4 bits (98), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 30/44 (68%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
++I +LL++I T PGA+LVFLPGW+ I ++ + + + F S
Sbjct: 637 ELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHFGS 680
>gi|307176984|gb|EFN66290.1| Dosage compensation regulator [Camponotus floridanus]
Length = 1243
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/115 (49%), Positives = 76/115 (66%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+L+FLPGW+ I +L + + Q S F S + IIPLHS LP Q+ +F+ P V KI+L+
Sbjct: 651 VLIFLPGWNLIFALMKHLQQHSVFGGSSYLIIPLHSQLPREDQRKVFDPVPSSVTKIILS 710
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+D+VYV+D K KM F +N+ W S N +QR+GRAGR
Sbjct: 711 TNIAETSITINDVVYVIDSCKAKMKLFTSHNNMTNYATVWASKTNLEQRKGRAGR 765
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 42/92 (45%)
Query: 299 GRAGRTLKRSETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWD 358
G L + Y + N + + ++ ++I +LL +I PGA+L+FLPGW+
Sbjct: 600 GEPEENLNKVIDNDYSIETKNAMAQLTEKEISFELIEALLIYIKRQNIPGAVLIFLPGWN 659
Query: 359 TINSLHRSMCQSSFFNSCLLYEFAMVDNKPKE 390
I +L + + Q S F + P+E
Sbjct: 660 LIFALMKHLQQHSVFGGSSYLIIPLHSQLPRE 691
>gi|507662850|ref|XP_004706688.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2 [Echinops
telfairi]
Length = 1381
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 81/118 (68%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLH-RSMCQSSFF--NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
IL+FLPG+D I L R + F N+ R+Q+ LHS + T QK + PP GVRKI
Sbjct: 576 ILIFLPGYDEIVGLRDRILFDDKRFADNTQRYQVFMLHSNMQTSDQKKVLKNPPAGVRKI 635
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+L+TNIAETSIT++D+V+V+D GK K +FD +++ LK WIS A+A QR+GRAGR
Sbjct: 636 ILSTNIAETSITVNDVVFVIDAGKMKEKSFDALNSVTMLKMVWISKASAIQRKGRAGR 693
>gi|156368791|ref|XP_001627875.1| predicted protein [Nematostella vectensis]
gi|156214837|gb|EDO35812.1| predicted protein [Nematostella vectensis]
Length = 803
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 77/115 (66%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+L+FLPGW+ I +LH+ + F + ++++PLHS +P Q+ +F PEGV KI+L+
Sbjct: 513 VLIFLPGWNLIFALHKHLKMHPQFGTPNYRLLPLHSQIPREDQRRVFEPVPEGVTKIILS 572
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITIDD+V+V+D K K+ F +N+ W S N +QRRGRAGR
Sbjct: 573 TNIAETSITIDDVVFVIDSVKAKVKLFTSHNNMTNYATVWASQTNMEQRRGRAGR 627
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 26/36 (72%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSM 367
++I +LL +I PGA+L+FLPGW+ I +LH+ +
Sbjct: 495 ELIEALLNYISGLGIPGAVLIFLPGWNLIFALHKHL 530
>gi|307197483|gb|EFN78717.1| Dosage compensation regulator [Harpegnathos saltator]
Length = 1243
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/115 (49%), Positives = 75/115 (65%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+L+FLPGW+ I +L + + Q F S + +IPLHS LP Q+ +F+ P V KI+L+
Sbjct: 653 VLIFLPGWNLIFALMKHLQQHPLFGGSSYFVIPLHSQLPREDQRKVFDPVPSTVTKIILS 712
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITIDDIVYV+D K KM F +N+ W S N +QR+GRAGR
Sbjct: 713 TNIAETSITIDDIVYVIDSCKAKMKLFTSHNNMTNYATVWASKTNLEQRKGRAGR 767
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNSCLLYEFAMVDNKPKE 390
++I LL++I PGA+L+FLPGW+ I +L + + Q F + + P+E
Sbjct: 635 ELIEILLKYIKAQNIPGAVLIFLPGWNLIFALMKHLQQHPLFGGSSYFVIPLHSQLPRE 693
>gi|195027549|ref|XP_001986645.1| GH20409 [Drosophila grimshawi]
gi|193902645|gb|EDW01512.1| GH20409 [Drosophila grimshawi]
Length = 1335
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/116 (48%), Positives = 80/116 (68%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGW+ I +L + + S+ F + +++I+P HS +P Q+ +F + P+GV KI+L+
Sbjct: 656 ILVFLPGWNLIFALMKYLQSSTNFGNPQYRILPCHSQIPRDDQRKVFESVPDGVTKIILS 715
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT 304
TNIAETSITIDDIV+VVD K +M F +N+ + W S N +QR+GRAGR
Sbjct: 716 TNIAETSITIDDIVFVVDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGRV 771
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 32/47 (68%)
Query: 329 VNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
V+ +++ SLL HI + PGAILVFLPGW+ I +L + + S+ F +
Sbjct: 635 VSFELLESLLMHIKSKNIPGAILVFLPGWNLIFALMKYLQSSTNFGN 681
Score = 39.7 bits (91), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 6/61 (9%)
Query: 39 RKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHL------DFI 92
R+ Y++ LE R KLP MR +++ + +Q+ +I G TG G + D+I
Sbjct: 366 RRESDAEYRQFLEFRDKLPIAAMRSEIMNAINESQVVIIRGNTGCGKTTQIAQYILDDYI 425
Query: 93 T 93
T
Sbjct: 426 T 426
>gi|335306989|ref|XP_003130411.2| PREDICTED: ATP-dependent RNA helicase A-like [Sus scrofa]
Length = 1286
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/115 (46%), Positives = 78/115 (67%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPGW+ I ++ + + + F + R+QI+PLHS +P Q+ +F+ P GV K++L+
Sbjct: 649 VLVFLPGWNLIYTMQKHLEMNPHFGNHRYQILPLHSQIPREEQRKVFDPVPAGVTKVILS 708
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+D+VYV+D K K+ F +N+ W S N +QR+GRAGR
Sbjct: 709 TNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGR 763
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 30/44 (68%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
++I +LL++I T PGA+LVFLPGW+ I ++ + + + F +
Sbjct: 631 ELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHFGN 674
>gi|21666020|gb|AAM73547.1|AF283512_1 putative DEAH-box RNA/DNA helicase [Homo sapiens]
Length = 860
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 80/118 (67%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN---SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVFLPG I L+ + +S FN S+R I PLHS L + Q+++F PP GV KI
Sbjct: 324 ILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLHSSLSSEEQQAVFVKPPAGVTKI 383
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+++TNIAETSITIDD+VYV+D GK K +D + +L+ ++S ANA QR+GRAGR
Sbjct: 384 IISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGR 441
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 34/45 (75%)
Query: 40 KLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
K SR++Q +L+ R+ LP+++ R+ +L+++R +Q+ VISG TG G
Sbjct: 2 KQASRQFQSILQERQSLPAWEERETILNLLRKHQVVVISGMTGCG 46
>gi|348575085|ref|XP_003473320.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2 [Cavia
porcellus]
Length = 1438
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 81/118 (68%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLH-RSMCQSSFF--NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
+L+FLPG+D I L R + F N+ R+Q+ LHS + T QK + TPP GVRKI
Sbjct: 633 VLIFLPGYDEIVGLRDRILFDDKRFADNAHRYQVFMLHSNMQTSDQKKVLKTPPAGVRKI 692
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+L+TNIAETSIT++D+V+V+D GK K +FD + + LK WIS A+A QR+GRAGR
Sbjct: 693 ILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGR 750
>gi|345325475|ref|XP_001515991.2| PREDICTED: ATP-dependent RNA helicase A [Ornithorhynchus anatinus]
Length = 1332
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/115 (46%), Positives = 79/115 (68%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPGW+ I ++ + + + F S R++I+PLHS +P Q+ +F++ P GV K++L+
Sbjct: 665 VLVFLPGWNLIYTMQKHLEMNPHFGSHRYRILPLHSQIPREEQRKVFDSVPAGVTKVILS 724
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+D+VYV+D K K+ F +N+ W S N +QR+GRAGR
Sbjct: 725 TNIAETSITINDVVYVLDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGR 779
Score = 42.4 bits (98), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 30/44 (68%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
++I +LL++I T PGA+LVFLPGW+ I ++ + + + F S
Sbjct: 647 ELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHFGS 690
>gi|348578187|ref|XP_003474865.1| PREDICTED: ATP-dependent RNA helicase A isoform X1 [Cavia
porcellus]
Length = 1291
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 78/115 (67%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPGW+ I ++ + + + F S R+QI+PLHS +P Q+ +F+ P GV K++L+
Sbjct: 661 VLVFLPGWNLICTMQKHLEMNPHFGSHRYQILPLHSQIPREEQRKVFDPVPVGVTKVILS 720
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+D+VYV+D K K+ F +N+ W S N +QR+GRAGR
Sbjct: 721 TNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGR 775
Score = 42.0 bits (97), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 30/44 (68%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
++I +LL++I T PGA+LVFLPGW+ I ++ + + + F S
Sbjct: 643 ELIEALLKYIETLNVPGAVLVFLPGWNLICTMQKHLEMNPHFGS 686
>gi|40850932|gb|AAH65278.1| DHX57 protein, partial [Homo sapiens]
Length = 917
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/119 (50%), Positives = 80/119 (67%), Gaps = 3/119 (2%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN---SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVFLPG I L+ + +S FN S+R I PLHS L + Q+++F PP GV KI
Sbjct: 381 ILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLHSSLSSEEQQAVFVKPPAGVTKI 440
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT 304
+++TNIAETSITIDD+VYV+D GK K +D + +L+ ++S ANA QR+GRAGR
Sbjct: 441 IISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGRV 499
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 36/50 (72%)
Query: 35 KEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
K+ K SR++Q +L+ R+ LP+++ R+ +L+++R +Q+ VISG TG G
Sbjct: 54 KQFRMKQASRQFQSILQERQSLPAWEERETILNLLRKHQVVVISGMTGCG 103
>gi|58262180|ref|XP_568500.1| hypothetical protein CNM01980 [Cryptococcus neoformans var.
neoformans JEC21]
gi|134118507|ref|XP_772027.1| hypothetical protein CNBM1850 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50254633|gb|EAL17380.1| hypothetical protein CNBM1850 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57230673|gb|AAW46983.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 1581
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/122 (47%), Positives = 77/122 (63%), Gaps = 7/122 (5%)
Query: 189 ILVFLPGWDTINSLHRSMCQS-------SFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEG 241
+LVFLPGW+ I + + F +S RF I LHS +P QK +F TPP G
Sbjct: 928 VLVFLPGWEEIRKVADILLAGRYPLLGMDFRDSRRFSIHYLHSTIPAAEQKEVFRTPPPG 987
Query: 242 VRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRA 301
VR+I+LATNIAETSITI D+VYVVD G+ K +D + ++++L W+ +N QR GRA
Sbjct: 988 VRRIILATNIAETSITIPDVVYVVDTGRVKEKRYDPERHMSSLVSAWVGSSNLNQRAGRA 1047
Query: 302 GR 303
GR
Sbjct: 1048 GR 1049
>gi|31657193|gb|AAH53623.1| DHX57 protein, partial [Homo sapiens]
Length = 852
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 80/118 (67%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN---SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVFLPG I L+ + +S FN S+R I PLHS L + Q+++F PP GV KI
Sbjct: 316 ILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLHSSLSSEEQQAVFVKPPAGVTKI 375
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+++TNIAETSITIDD+VYV+D GK K +D + +L+ ++S ANA QR+GRAGR
Sbjct: 376 IISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGR 433
Score = 42.4 bits (98), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 29/38 (76%)
Query: 47 QEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
Q +L+ R+ LP+++ R+ +L+++R +Q+ VISG TG G
Sbjct: 1 QSILQERQSLPAWEERETILNLLRKHQVVVISGMTGCG 38
>gi|62988869|gb|AAY24256.1| unknown [Homo sapiens]
Length = 860
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 80/118 (67%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN---SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVFLPG I L+ + +S FN S+R I PLHS L + Q+++F PP GV KI
Sbjct: 324 ILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLHSSLSSEEQQAVFVKPPAGVTKI 383
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+++TNIAETSITIDD+VYV+D GK K +D + +L+ ++S ANA QR+GRAGR
Sbjct: 384 IISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGR 441
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 34/45 (75%)
Query: 40 KLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
K SR++Q +L+ R+ LP+++ R+ +L+++R +Q+ VISG TG G
Sbjct: 2 KQASRQFQSILQERQSLPAWEERETILNLLRKHQVVVISGMTGCG 46
>gi|336365386|gb|EGN93737.1| hypothetical protein SERLA73DRAFT_115779 [Serpula lacrymans var.
lacrymans S7.3]
Length = 1302
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/119 (47%), Positives = 79/119 (66%), Gaps = 4/119 (3%)
Query: 189 ILVFLPGWDTINSLHRSMCQS----SFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRK 244
+LVFLPGW+ I ++ R + +F +SS++ + LHS +P Q+ IF PPEGVR+
Sbjct: 651 VLVFLPGWEEITAVQRILLSGRMDLNFSDSSKYGLHLLHSTIPLAEQQVIFEPPPEGVRR 710
Query: 245 IVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
I+LATNIAETSITI D+VYV+D GK K ++ ++ +L W+ +N QR GRAGR
Sbjct: 711 IILATNIAETSITIPDVVYVIDSGKVKEQRYNPDKHMTSLVSAWVGSSNLNQRAGRAGR 769
>gi|119620762|gb|EAX00357.1| hCG2039711, isoform CRA_a [Homo sapiens]
Length = 819
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/119 (50%), Positives = 80/119 (67%), Gaps = 3/119 (2%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN---SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVFLPG I L+ + +S FN S+R I PLHS L + Q+++F PP GV KI
Sbjct: 283 ILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLHSSLSSEEQQAVFVKPPAGVTKI 342
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT 304
+++TNIAETSITIDD+VYV+D GK K +D + +L+ ++S ANA QR+GRAGR
Sbjct: 343 IISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGRV 401
>gi|513002770|ref|XP_004862879.1| PREDICTED: ATP-dependent RNA helicase A isoform X1 [Heterocephalus
glaber]
Length = 1374
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 78/115 (67%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPGW+ I ++ + + + F S R+QI+PLHS +P Q+ +F+ P GV K++L+
Sbjct: 656 VLVFLPGWNLICTMQKHLEMNPHFGSHRYQILPLHSQIPREEQRKVFDPVPVGVTKVILS 715
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+D+VYV+D K K+ F +N+ W S N +QR+GRAGR
Sbjct: 716 TNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGR 770
Score = 42.0 bits (97), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 30/44 (68%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
++I +LL++I T PGA+LVFLPGW+ I ++ + + + F S
Sbjct: 638 ELIEALLKYIETLNVPGAVLVFLPGWNLICTMQKHLEMNPHFGS 681
>gi|507709369|ref|XP_004646655.1| PREDICTED: ATP-dependent RNA helicase A-like [Octodon degus]
Length = 1294
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 78/115 (67%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPGW+ I ++ + + + F S R+QI+PLHS +P Q+ +F+ P GV K++L+
Sbjct: 671 VLVFLPGWNLICTMQKHLEMNPHFGSHRYQILPLHSQIPREEQRKVFDPVPVGVTKVILS 730
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+D+VYV+D K K+ F +N+ W S N +QR+GRAGR
Sbjct: 731 TNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGR 785
Score = 41.6 bits (96), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 30/44 (68%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
++I +LL++I T PGA+LVFLPGW+ I ++ + + + F S
Sbjct: 653 ELIEALLKYIETLNVPGAVLVFLPGWNLICTMQKHLEMNPHFGS 696
>gi|513002772|ref|XP_004862880.1| PREDICTED: ATP-dependent RNA helicase A isoform X2 [Heterocephalus
glaber]
Length = 1157
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 78/116 (67%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPGW+ I ++ + + + F S R+QI+PLHS +P Q+ +F+ P GV K++L+
Sbjct: 439 VLVFLPGWNLICTMQKHLEMNPHFGSHRYQILPLHSQIPREEQRKVFDPVPVGVTKVILS 498
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT 304
TNIAETSITI+D+VYV+D K K+ F +N+ W S N +QR+GRAGR
Sbjct: 499 TNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRV 554
Score = 41.6 bits (96), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 30/44 (68%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
++I +LL++I T PGA+LVFLPGW+ I ++ + + + F S
Sbjct: 421 ELIEALLKYIETLNVPGAVLVFLPGWNLICTMQKHLEMNPHFGS 464
>gi|405123662|gb|AFR98426.1| nuclear DNA helicase II [Cryptococcus neoformans var. grubii H99]
Length = 1615
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/122 (47%), Positives = 77/122 (63%), Gaps = 7/122 (5%)
Query: 189 ILVFLPGWDTINSLHRSMCQS-------SFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEG 241
+LVFLPGW+ I + + F +S RF I LHS +P QK +F TPP G
Sbjct: 911 VLVFLPGWEEIKKVADILLAGRYPLLGMDFRDSRRFSIHYLHSTIPAAEQKEVFRTPPPG 970
Query: 242 VRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRA 301
VR+I+LATNIAETSITI D+VYVVD G+ K +D + ++++L W+ +N QR GRA
Sbjct: 971 VRRIILATNIAETSITIPDVVYVVDTGRVKEKRYDPERHMSSLVSAWVGSSNLNQRAGRA 1030
Query: 302 GR 303
GR
Sbjct: 1031 GR 1032
>gi|62088078|dbj|BAD92486.1| DHX57 protein variant [Homo sapiens]
Length = 733
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/119 (50%), Positives = 80/119 (67%), Gaps = 3/119 (2%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN---SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVFLPG I L+ + +S FN S+R I PLHS L + Q+++F PP GV KI
Sbjct: 242 ILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLHSSLSSEEQQAVFVKPPAGVTKI 301
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT 304
+++TNIAETSITIDD+VYV+D GK K +D + +L+ ++S ANA QR+GRAGR
Sbjct: 302 IISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGRV 360
>gi|449662281|ref|XP_002164293.2| PREDICTED: ATP-dependent RNA helicase A-like protein-like [Hydra
magnipapillata]
Length = 1355
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 74/116 (63%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+L+FLPGW+ I L + Q F S ++ +IPLHS +P Q +F P GV+KI+L+
Sbjct: 613 VLIFLPGWNAIFKLLGHLQQHQVFGSQKYLLIPLHSQIPRADQAKVFKPAPHGVQKIILS 672
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT 304
TNIAETSITIDD+V+V+D K K+ F +N+ W S +N QR+GRAGR
Sbjct: 673 TNIAETSITIDDVVFVIDACKAKVKQFTSHNNMNNYSTLWASQSNLDQRKGRAGRV 728
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Query: 36 EMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG-----PPLHLD 90
E K + MLE RKKLP Y+ + ++++V NQ+ +I G TG G P LD
Sbjct: 331 EFQAKWDDSSFVSMLEQRKKLPVYKYKQQIIELVNENQVVIIRGATGCGKTTQVPQYILD 390
Query: 91 FITLKRSETQ 100
LK + Q
Sbjct: 391 DFILKSAGDQ 400
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 333 VIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
+I +LL HI + + PGA+L+FLPGW+ I L + Q F S
Sbjct: 596 LIVALLLHITSLENPGAVLIFLPGWNAIFKLLGHLQQHQVFGS 638
>gi|110331963|gb|ABG67087.1| DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57 [Bos taurus]
Length = 459
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 80/118 (67%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN---SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVFLPG I L+ + +S FN S+R I PLHS L + Q+++F PP GV KI
Sbjct: 219 ILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLHSSLSSEEQQAVFVKPPMGVTKI 278
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+++TNIAETSITIDD+VYV+D GK K +D + +L+ ++S ANA QR+GRAGR
Sbjct: 279 IISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGR 336
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 311 QQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQR---PGAILVFLPGWDTINSLHRSM 367
Q V+ + + E VN ++I +LL+ I + PGAILVFLPG I L+ +
Sbjct: 177 QGVSKSVIKTMSVMDFEKVNLELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQL 236
Query: 368 CQSSFFNS 375
+S FN+
Sbjct: 237 QSNSLFNN 244
>gi|504140721|ref|XP_004582807.1| PREDICTED: putative ATP-dependent RNA helicase DHX57 isoform X1
[Ochotona princeps]
Length = 1385
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 80/118 (67%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQ---IIPLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVFLPG I L+ + +S FNS R + I PLHS L + Q+++F PP GV KI
Sbjct: 849 ILVFLPGLAEIKMLYEQLQSNSLFNSRRSKRCIIHPLHSSLSSEEQQAVFVKPPVGVTKI 908
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+++TNIAETSITIDD+VYV+D GK K +D + +L+ ++S ANA QR+GRAGR
Sbjct: 909 IISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGR 966
Score = 43.1 bits (100), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 35/55 (63%)
Query: 30 DAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+A K+ + SR++Q +L+ R+ LP+++ R +L ++ +Q+ VISG TG G
Sbjct: 517 NAEICKQFQSRQASRQFQTILQERQSLPAWEERGNILKLLSKHQVVVISGMTGCG 571
>gi|514470321|ref|XP_005005885.1| PREDICTED: ATP-dependent RNA helicase A isoform X2 [Cavia
porcellus]
Length = 1406
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 78/115 (67%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPGW+ I ++ + + + F S R+QI+PLHS +P Q+ +F+ P GV K++L+
Sbjct: 678 VLVFLPGWNLICTMQKHLEMNPHFGSHRYQILPLHSQIPREEQRKVFDPVPVGVTKVILS 737
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+D+VYV+D K K+ F +N+ W S N +QR+GRAGR
Sbjct: 738 TNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGR 792
Score = 41.6 bits (96), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 30/44 (68%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
++I +LL++I T PGA+LVFLPGW+ I ++ + + + F S
Sbjct: 660 ELIEALLKYIETLNVPGAVLVFLPGWNLICTMQKHLEMNPHFGS 703
>gi|514470323|ref|XP_005005886.1| PREDICTED: ATP-dependent RNA helicase A isoform X3 [Cavia
porcellus]
Length = 1391
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 78/115 (67%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPGW+ I ++ + + + F S R+QI+PLHS +P Q+ +F+ P GV K++L+
Sbjct: 663 VLVFLPGWNLICTMQKHLEMNPHFGSHRYQILPLHSQIPREEQRKVFDPVPVGVTKVILS 722
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+D+VYV+D K K+ F +N+ W S N +QR+GRAGR
Sbjct: 723 TNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGR 777
Score = 41.6 bits (96), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 30/44 (68%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
++I +LL++I T PGA+LVFLPGW+ I ++ + + + F S
Sbjct: 645 ELIEALLKYIETLNVPGAVLVFLPGWNLICTMQKHLEMNPHFGS 688
>gi|426335313|ref|XP_004029172.1| PREDICTED: putative ATP-dependent RNA helicase DHX57 [Gorilla
gorilla gorilla]
Length = 1250
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/119 (50%), Positives = 80/119 (67%), Gaps = 3/119 (2%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN---SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVFLPG I L+ + +S FN S+R I PLHS L + Q+++F PP GV KI
Sbjct: 748 ILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLHSSLSSEEQQAVFVKPPAGVTKI 807
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT 304
+++TNIAETSITIDD+VYV+D GK K +D + +L+ ++S ANA QR+GRAGR
Sbjct: 808 IISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGRV 866
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 36/50 (72%)
Query: 35 KEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
K+ K SR++Q +L+ R+ LP+++ R+ +L+++R +Q+ VISG TG G
Sbjct: 421 KQFRMKQASRQFQSILQERQSLPAWEERETILNLLRKHQVVVISGMTGCG 470
>gi|195485815|ref|XP_002091244.1| GE13544 [Drosophila yakuba]
gi|194177345|gb|EDW90956.1| GE13544 [Drosophila yakuba]
Length = 939
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 53/119 (44%), Positives = 84/119 (70%), Gaps = 4/119 (3%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQ----IIPLHSMLPTVSQKSIFNTPPEGVRK 244
ILVFLPG+D I+ L + + R++ + PLHS++ + Q+++F PP G RK
Sbjct: 422 ILVFLPGYDKISQLFNILDKPKTPKGQRWRDHMAVFPLHSLMQSGEQQAVFRRPPTGKRK 481
Query: 245 IVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
++++T IAETS+TIDD+VYV++ G+TK +N+D++ NI +L W++ AN +QR+GRAGR
Sbjct: 482 VIISTIIAETSVTIDDVVYVINSGRTKATNYDIETNIQSLDEVWVTKANTQQRKGRAGR 540
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 313 YPNDVLNMLKDPELEGVNN-DVIFSLLQHICTTQRPGAILVFLPGWDTINSL 363
Y + VL L+ PE EG + D I L+ +IC + GAILVFLPG+D I+ L
Sbjct: 384 YDSRVLEKLRLPESEGCEDIDFIADLVYYICENEPEGAILVFLPGYDKISQL 435
Score = 39.3 bits (90), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%)
Query: 26 DPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+P LD + E+ ++ ++ L ARKKLP+ + D ++ V NQ+ +I G TG G
Sbjct: 120 NPKLDERLQLELEQRQLEENGRKRLAARKKLPTMKYADEIVQAVCENQVILIVGSTGCG 178
>gi|524865785|ref|XP_005089719.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like [Aplysia
californica]
Length = 1574
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 77/117 (65%), Gaps = 2/117 (1%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSR--FQIIPLHSMLPTVSQKSIFNTPPEGVRKIV 246
ILVFLPG++ I ++H + F S + F + LHS + QK +F +GVRKI+
Sbjct: 593 ILVFLPGYEDIMTVHGKIIHDERFASKKNTFLLFTLHSSIQASEQKKVFRATSKGVRKII 652
Query: 247 LATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
L+TNIAETS+TI+D+VYV+D GK K FD N +TL WIS A+A QR+GRAGR
Sbjct: 653 LSTNIAETSVTINDVVYVIDSGKVKEKTFDALSNFSTLNSNWISKASALQRKGRAGR 709
>gi|195119908|ref|XP_002004471.1| GI19596 [Drosophila mojavensis]
gi|193909539|gb|EDW08406.1| GI19596 [Drosophila mojavensis]
Length = 1351
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/115 (48%), Positives = 80/115 (69%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGW+ I +L + + S+ F +S+++I+P HS +P Q+ +F P+GV KI+L+
Sbjct: 652 ILVFLPGWNLIFALMKFLQSSTNFGNSQYRILPCHSQIPRDDQRKVFEPVPDGVTKIILS 711
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITIDDIV+V+D K +M F +N+ + W S N +QR+GRAGR
Sbjct: 712 TNIAETSITIDDIVFVIDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGR 766
>gi|504140723|ref|XP_004582808.1| PREDICTED: putative ATP-dependent RNA helicase DHX57 isoform X2
[Ochotona princeps]
Length = 1332
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 80/118 (67%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQ---IIPLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVFLPG I L+ + +S FNS R + I PLHS L + Q+++F PP GV KI
Sbjct: 796 ILVFLPGLAEIKMLYEQLQSNSLFNSRRSKRCIIHPLHSSLSSEEQQAVFVKPPVGVTKI 855
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+++TNIAETSITIDD+VYV+D GK K +D + +L+ ++S ANA QR+GRAGR
Sbjct: 856 IISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGR 913
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 35/55 (63%)
Query: 30 DAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+A K+ + SR++Q +L+ R+ LP+++ R +L ++ +Q+ VISG TG G
Sbjct: 464 NAEICKQFQSRQASRQFQTILQERQSLPAWEERGNILKLLSKHQVVVISGMTGCG 518
>gi|336377946|gb|EGO19106.1| hypothetical protein SERLADRAFT_418699 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1469
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/119 (47%), Positives = 79/119 (66%), Gaps = 4/119 (3%)
Query: 189 ILVFLPGWDTINSLHRSMCQS----SFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRK 244
+LVFLPGW+ I ++ R + +F +SS++ + LHS +P Q+ IF PPEGVR+
Sbjct: 720 VLVFLPGWEEITAVQRILLSGRMDLNFSDSSKYGLHLLHSTIPLAEQQVIFEPPPEGVRR 779
Query: 245 IVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
I+LATNIAETSITI D+VYV+D GK K ++ ++ +L W+ +N QR GRAGR
Sbjct: 780 IILATNIAETSITIPDVVYVIDSGKVKEQRYNPDKHMTSLVSAWVGSSNLNQRAGRAGR 838
>gi|514470326|ref|XP_005005887.1| PREDICTED: ATP-dependent RNA helicase A isoform X4 [Cavia
porcellus]
Length = 1167
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 78/116 (67%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPGW+ I ++ + + + F S R+QI+PLHS +P Q+ +F+ P GV K++L+
Sbjct: 439 VLVFLPGWNLICTMQKHLEMNPHFGSHRYQILPLHSQIPREEQRKVFDPVPVGVTKVILS 498
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT 304
TNIAETSITI+D+VYV+D K K+ F +N+ W S N +QR+GRAGR
Sbjct: 499 TNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRV 554
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 30/44 (68%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
++I +LL++I T PGA+LVFLPGW+ I ++ + + + F S
Sbjct: 421 ELIEALLKYIETLNVPGAVLVFLPGWNLICTMQKHLEMNPHFGS 464
>gi|194878727|ref|XP_001974117.1| GG21550 [Drosophila erecta]
gi|190657304|gb|EDV54517.1| GG21550 [Drosophila erecta]
Length = 939
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 107/207 (51%), Gaps = 55/207 (26%)
Query: 102 YPNDVLNMLKDPELEGVNN-DVIFSLLQHICTTQRPGAILVYCTYTFMGVSPMKVFFCKN 160
Y + VL+ L+ PE EG + D I L+ +IC + GA
Sbjct: 384 YDSRVLDKLRLPESEGCEDIDFIADLVYYICENEPEGA---------------------- 421
Query: 161 VLQRLMKGVGANSPKRWVKLLRSMLVVPILVFLPGWDTINSLHRSMCQSSFFNSSRFQ-- 218
ILVFLPG+D I+ L+ + + R++
Sbjct: 422 ----------------------------ILVFLPGYDKISQLYNILDKPKTPKGQRWRDH 453
Query: 219 --IIPLHSMLPTVSQKSIFNTPPEGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFD 276
+ PLHS++ + Q+++F PP G RK++++T IAETS+TIDD+VYV++ G+TK +++D
Sbjct: 454 MAVFPLHSLMQSGEQQAVFKRPPAGKRKVIISTIIAETSVTIDDVVYVINSGRTKATSYD 513
Query: 277 VKDNIATLKPEWISLANAKQRRGRAGR 303
++ NI +L W++ AN +QR+GRAGR
Sbjct: 514 IETNIQSLDEVWVTKANTQQRKGRAGR 540
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 313 YPNDVLNMLKDPELEGVNN-DVIFSLLQHICTTQRPGAILVFLPGWDTINSLH 364
Y + VL+ L+ PE EG + D I L+ +IC + GAILVFLPG+D I+ L+
Sbjct: 384 YDSRVLDKLRLPESEGCEDIDFIADLVYYICENEPEGAILVFLPGYDKISQLY 436
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 14 VTSWETRQKLLN--DPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRN 71
V + R LN +P LD + E+ ++ + ++ L AR+KLP+ + D ++ VR
Sbjct: 106 VAETKERNADLNCVNPKLDERLQLELEQRQLEEKARKRLAARQKLPTMKYADEIVQAVRE 165
Query: 72 NQITVISGETGSG 84
NQ+ +I G TG G
Sbjct: 166 NQVILIVGSTGCG 178
>gi|119620764|gb|EAX00359.1| hCG2039711, isoform CRA_c [Homo sapiens]
Length = 1321
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 80/118 (67%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN---SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVFLPG I L+ + +S FN S+R I PLHS L + Q+++F PP GV KI
Sbjct: 850 ILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLHSSLSSEEQQAVFVKPPAGVTKI 909
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+++TNIAETSITIDD+VYV+D GK K +D + +L+ ++S ANA QR+GRAGR
Sbjct: 910 IISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGR 967
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 36/50 (72%)
Query: 35 KEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
K+ K SR++Q +L+ R+ LP+++ R+ +L+++R +Q+ VISG TG G
Sbjct: 523 KQFRMKQASRQFQSILQERQSLPAWEERETILNLLRKHQVVVISGMTGCG 572
>gi|39777586|ref|NP_945314.1| putative ATP-dependent RNA helicase DHX57 [Homo sapiens]
gi|94710252|sp|Q6P158.2|DHX57_HUMAN RecName: Full=Putative ATP-dependent RNA helicase DHX57; AltName:
Full=DEAH box protein 57
gi|119620763|gb|EAX00358.1| hCG2039711, isoform CRA_b [Homo sapiens]
Length = 1386
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 80/118 (67%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN---SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVFLPG I L+ + +S FN S+R I PLHS L + Q+++F PP GV KI
Sbjct: 850 ILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLHSSLSSEEQQAVFVKPPAGVTKI 909
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+++TNIAETSITIDD+VYV+D GK K +D + +L+ ++S ANA QR+GRAGR
Sbjct: 910 IISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGR 967
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 36/50 (72%)
Query: 35 KEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
K+ K SR++Q +L+ R+ LP+++ R+ +L+++R +Q+ VISG TG G
Sbjct: 523 KQFRMKQASRQFQSILQERQSLPAWEERETILNLLRKHQVVVISGMTGCG 572
>gi|397493579|ref|XP_003817681.1| PREDICTED: putative ATP-dependent RNA helicase DHX57 [Pan paniscus]
Length = 1387
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 80/118 (67%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN---SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVFLPG I L+ + +S FN S+R I PLHS L + Q+++F PP GV KI
Sbjct: 851 ILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLHSSLSSEEQQAVFVKPPAGVTKI 910
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+++TNIAETSITIDD+VYV+D GK K +D + +L+ ++S ANA QR+GRAGR
Sbjct: 911 IISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGR 968
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 36/50 (72%)
Query: 35 KEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
K+ K SR++Q +L+ R+ LP+++ R+ +L+++R +Q+ VISG TG G
Sbjct: 524 KQFRMKQASRQFQSILQERQSLPAWEERETILNLLRKHQVVVISGMTGCG 573
>gi|328780685|ref|XP_392558.3| PREDICTED: probable ATP-dependent RNA helicase YTHDC2 [Apis
mellifera]
Length = 1155
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/120 (50%), Positives = 77/120 (64%), Gaps = 2/120 (1%)
Query: 189 ILVFLPGWDTINSLHRSMC--QSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIV 246
+LVFLPG+D I ++ + + R+ + LHS + T QK +F P G RKI+
Sbjct: 585 LLVFLPGYDDIVTMREKINNEEKEMNKGLRYNLYVLHSNMQTCDQKKVFKPSPVGTRKII 644
Query: 247 LATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLK 306
L+TNIAETSITIDD+VYV+D GK K +FD + TLK WIS A AKQR+GRAGR K
Sbjct: 645 LSTNIAETSITIDDVVYVIDSGKVKEKSFDALSGVCTLKSNWISQACAKQRKGRAGRCRK 704
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 33/56 (58%)
Query: 48 EMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHLDFITLKRSETQQYP 103
++L RK LP + R+ +LD + NNQ+ +I GETGSG + L+ + +Q P
Sbjct: 156 DVLNYRKALPIFNFREDILDALNNNQVVIIGGETGSGKTTQVPQFILEHCQQRQQP 211
>gi|512810715|ref|XP_002936459.2| PREDICTED: probable ATP-dependent RNA helicase YTHDC2 isoform X1
[Xenopus (Silurana) tropicalis]
Length = 1419
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/118 (50%), Positives = 80/118 (67%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLH-RSMCQSSFF--NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
IL+FLPG+D I L R + F N+ R+ + LHS + T QK + PP G+RKI
Sbjct: 617 ILIFLPGYDEIVGLRDRILLDDKRFADNAQRYHVFMLHSNMQTSDQKKVLKLPPAGIRKI 676
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+L+TNIAETSIT++D+V+V+D GK K +FD +N+ LK WIS A+A QR+GRAGR
Sbjct: 677 ILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNNVTMLKMVWISKASAIQRKGRAGR 734
>gi|124297149|gb|AAI31535.1| DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57 [Homo sapiens]
Length = 1386
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 80/118 (67%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN---SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVFLPG I L+ + +S FN S+R I PLHS L + Q+++F PP GV KI
Sbjct: 850 ILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLHSSLSSEEQQAVFVKPPAGVTKI 909
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+++TNIAETSITIDD+VYV+D GK K +D + +L+ ++S ANA QR+GRAGR
Sbjct: 910 IISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGR 967
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 36/50 (72%)
Query: 35 KEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
K+ K SR++Q +L+ R+ LP+++ R+ +L+++R +Q+ VISG TG G
Sbjct: 523 KQFRMKQASRQFQSILQERQSLPAWEERETILNLLRKHQVVVISGMTGCG 572
>gi|410931708|ref|XP_003979237.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase A-like,
partial [Takifugu rubripes]
Length = 1004
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 85/128 (66%), Gaps = 1/128 (0%)
Query: 178 VKLLRSMLVV-PILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFN 236
+K + S+ V +L+FLPGW+ I S+ R + + F S+R++I+PLHS +P Q+ +F
Sbjct: 376 LKYIESLQVAGAVLIFLPGWNLIYSMQRHLETNPHFGSNRYRILPLHSQIPREEQRRVFE 435
Query: 237 TPPEGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQ 296
+ P+ + K++L+TNIAETSITI+D+VYV+D K K+ F +N+ W S N +Q
Sbjct: 436 SVPDNITKVILSTNIAETSITINDVVYVIDSCKQKVKLFTSHNNMTNYATVWASKTNLEQ 495
Query: 297 RRGRAGRT 304
R+GRAGR
Sbjct: 496 RKGRAGRV 503
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 30/44 (68%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
+++ +LL++I + Q GA+L+FLPGW+ I S+ R + + F S
Sbjct: 370 ELVEALLKYIESLQVAGAVLIFLPGWNLIYSMQRHLETNPHFGS 413
>gi|512868943|ref|XP_004891834.1| PREDICTED: ATP-dependent RNA helicase A isoform X1 [Heterocephalus
glaber]
Length = 1430
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 78/115 (67%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPGW+ I ++ + + + F S R+QI+PLHS +P Q+ +F+ P GV K++L+
Sbjct: 656 VLVFLPGWNLICTMQKHLEMNPHFGSHRYQILPLHSQIPREEQRKVFDPVPVGVTKVILS 715
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+D+VYV+D K K+ F +N+ W S N +QR+GRAGR
Sbjct: 716 TNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGR 770
Score = 41.6 bits (96), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 30/44 (68%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
++I +LL++I T PGA+LVFLPGW+ I ++ + + + F S
Sbjct: 638 ELIEALLKYIETLNVPGAVLVFLPGWNLICTMQKHLEMNPHFGS 681
>gi|242075834|ref|XP_002447853.1| hypothetical protein SORBIDRAFT_06g016980 [Sorghum bicolor]
gi|241939036|gb|EES12181.1| hypothetical protein SORBIDRAFT_06g016980 [Sorghum bicolor]
Length = 1240
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/147 (44%), Positives = 91/147 (61%), Gaps = 11/147 (7%)
Query: 189 ILVFLPGWDTINSLHRSMCQS-SFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFLPG I+ L + S F +S I+PLHS+L Q+ +F +PP+ RK+++
Sbjct: 885 ILVFLPGVAEIDLLIDRLSASVRFGGASSDWILPLHSLLGPSDQRKVFQSPPDNFRKVII 944
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR---- 303
AT+IAETSITIDD++YVVD GK K + ++ + ++++ +WIS ANAKQRRGRAGR
Sbjct: 945 ATDIAETSITIDDVIYVVDTGKHKENRYNPRKKMSSIVEDWISRANAKQRRGRAGRVKPG 1004
Query: 304 ------TLKRSETQQYPNDVLNMLKDP 324
T R E P V ML+ P
Sbjct: 1005 LCFCLYTRHRFENIMRPFQVPEMLRMP 1031
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 17/109 (15%)
Query: 18 ETRQKLLNDPVLDAAFKKEMIRKLQSRR----YQEMLEARKKLPSYQMRDAVLDMVRNNQ 73
E RQ + + D A + ++L+ +R Y +MLEAR LP + + L +++ N
Sbjct: 536 EKRQTSMKSSMADHAESAILKKQLEDKRKLPNYLKMLEARASLPIARQKQHFLQLLKEND 595
Query: 74 ITVISGETGSGPPLHLDFITLKRSETQQYPNDVLNMLKDPELEGVNNDV 122
+ V+SGETG G +T Q P +L+ + + EL G N V
Sbjct: 596 VVVVSGETGCG-------------KTTQVPQFILDDMIESELGGSCNIV 631
>gi|114577079|ref|XP_515423.2| PREDICTED: putative ATP-dependent RNA helicase DHX57 isoform 5 [Pan
troglodytes]
Length = 1387
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 80/118 (67%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN---SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVFLPG I L+ + +S FN S+R I PLHS L + Q+++F PP GV KI
Sbjct: 851 ILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLHSSLSSEEQQAVFVKPPAGVTKI 910
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+++TNIAETSITIDD+VYV+D GK K +D + +L+ ++S ANA QR+GRAGR
Sbjct: 911 IISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGR 968
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 36/50 (72%)
Query: 35 KEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
K+ K SR++Q +L+ R+ LP+++ R+ +L+++R +Q+ VISG TG G
Sbjct: 524 KQFRMKQASRQFQSILQERQSLPAWEERETILNLLRKHQVVVISGMTGCG 573
>gi|351704636|gb|EHB07555.1| ATP-dependent RNA helicase A [Heterocephalus glaber]
Length = 1513
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 78/115 (67%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPGW+ I ++ + + + F S R+QI+PLHS +P Q+ +F+ P GV K++L+
Sbjct: 739 VLVFLPGWNLICTMQKHLEMNPHFGSHRYQILPLHSQIPREEQRKVFDPVPVGVTKVILS 798
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+D+VYV+D K K+ F +N+ W S N +QR+GRAGR
Sbjct: 799 TNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGR 853
Score = 41.6 bits (96), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 30/44 (68%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
++I +LL++I T PGA+LVFLPGW+ I ++ + + + F S
Sbjct: 721 ELIEALLKYIETLNVPGAVLVFLPGWNLICTMQKHLEMNPHFGS 764
>gi|512810711|ref|XP_004910524.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2 isoform X2
[Xenopus (Silurana) tropicalis]
Length = 1457
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 59/118 (50%), Positives = 80/118 (67%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLH-RSMCQSSFF--NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
IL+FLPG+D I L R + F N+ R+ + LHS + T QK + PP G+RKI
Sbjct: 655 ILIFLPGYDEIVGLRDRILLDDKRFADNAQRYHVFMLHSNMQTSDQKKVLKLPPAGIRKI 714
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+L+TNIAETSIT++D+V+V+D GK K +FD +N+ LK WIS A+A QR+GRAGR
Sbjct: 715 ILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNNVTMLKMVWISKASAIQRKGRAGR 772
>gi|312383889|gb|EFR28785.1| hypothetical protein AND_02818 [Anopheles darlingi]
Length = 938
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 81/115 (70%), Gaps = 2/115 (1%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLP I+ + + + + +R + PLHS +PT Q ++F+ PP G RKI+L+
Sbjct: 549 ILVFLPSVMQISDIFKLIHDHPQLSKARLAVYPLHSKIPTAEQTAVFDRPPAGTRKIILS 608
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITIDD+VYVV+ G+ K++ ++ + ++ L+ EWISL+N QR+GRAGR
Sbjct: 609 TNIAETSITIDDVVYVVNAGRHKLNMYE--NGVSALRDEWISLSNEIQRKGRAGR 661
Score = 45.8 bits (107), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 29 LDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
LD +E R R + E R+KLP+Y R VLDM+ +Q+ ++ GETGSG
Sbjct: 247 LDEELYEEFERS--DRSTHRLSEFRRKLPAYASRSEVLDMIERHQVILVKGETGSG 300
>gi|512868947|ref|XP_004891835.1| PREDICTED: ATP-dependent RNA helicase A isoform X2 [Heterocephalus
glaber]
Length = 1213
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 78/116 (67%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPGW+ I ++ + + + F S R+QI+PLHS +P Q+ +F+ P GV K++L+
Sbjct: 439 VLVFLPGWNLICTMQKHLEMNPHFGSHRYQILPLHSQIPREEQRKVFDPVPVGVTKVILS 498
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT 304
TNIAETSITI+D+VYV+D K K+ F +N+ W S N +QR+GRAGR
Sbjct: 499 TNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRV 554
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 30/44 (68%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
++I +LL++I T PGA+LVFLPGW+ I ++ + + + F S
Sbjct: 421 ELIEALLKYIETLNVPGAVLVFLPGWNLICTMQKHLEMNPHFGS 464
>gi|504148467|ref|XP_004586644.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2 [Ochotona
princeps]
Length = 1654
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 80/118 (67%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLH-RSMCQSSFF--NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
+L+FLPG+D + L R + F N+ R+Q+ LHS + T QK + PP GVRKI
Sbjct: 850 VLIFLPGYDELVGLRDRILFDDKRFADNAHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKI 909
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+LATNIAETSIT++D+VYV+D GK K +FD + + LK WIS A+A QR+GRAGR
Sbjct: 910 ILATNIAETSITVNDVVYVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGR 967
>gi|403269670|ref|XP_003926839.1| PREDICTED: putative ATP-dependent RNA helicase DHX57 [Saimiri
boliviensis boliviensis]
Length = 1387
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 80/118 (67%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN---SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVFLPG I L+ + +S FN S+R I PLHS L + Q+++F PP GV KI
Sbjct: 851 ILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLHSSLSSEEQQAVFVKPPAGVTKI 910
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+++TNIAETSITIDD+VYV+D GK K +D + +L+ ++S ANA QR+GRAGR
Sbjct: 911 IISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGR 968
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 36/50 (72%)
Query: 35 KEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
K+ K SR++Q +L+ R+ LP+++ R+ +L+++R +Q+ VISG TG G
Sbjct: 524 KQFRMKQASRQFQSILQERQSLPAWEERETILNLLRKHQVVVISGMTGCG 573
>gi|170084047|ref|XP_001873247.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650799|gb|EDR15039.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 1453
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 58/115 (50%), Positives = 76/115 (66%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL+F+PG I LH + + F S+ F++ PLHS L +Q ++F+ PP GVRKIV+A
Sbjct: 938 ILIFMPGLGEIRRLHNMLAEHPAFGSNTFRLYPLHSTLSNENQGAVFDVPPAGVRKIVIA 997
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAET ITI DI V+D GK + FD K I+ L +I+ +NA QRRGRAGR
Sbjct: 998 TNIAETGITIPDITCVIDSGKHREMRFDEKRQISRLVETFIARSNAAQRRGRAGR 1052
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 26/39 (66%)
Query: 46 YQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
YQEML R LP Q R +L ++ N+Q+ V+SGETG G
Sbjct: 625 YQEMLTQRNMLPIAQHRAEILKILANSQVLVLSGETGCG 663
>gi|465995747|ref|XP_004267508.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like [Orcinus
orca]
Length = 1429
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 61/118 (51%), Positives = 80/118 (67%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLH-RSMCQSSFF--NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
IL+FLPG+D I L R + F N+ R+Q+ LHS + T QK I PP GVRKI
Sbjct: 625 ILIFLPGYDEIVGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKILKNPPAGVRKI 684
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+L+TNIAETSIT++D+V+V+D GK K +FD + + LK WIS A+A QR+GRAGR
Sbjct: 685 ILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGR 742
>gi|24585920|ref|NP_724440.1| maleless, isoform C [Drosophila melanogaster]
gi|21626790|gb|AAM68335.1| maleless, isoform C [Drosophila melanogaster]
gi|28381003|gb|AAO41468.1| LD44547p [Drosophila melanogaster]
gi|33636575|gb|AAQ23585.1| RE21725p [Drosophila melanogaster]
gi|220951968|gb|ACL88527.1| mle-PC [synthetic construct]
Length = 936
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 57/117 (48%), Positives = 81/117 (69%), Gaps = 1/117 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFLPGW+ I +L + + ++ F ++S++QI+P HS +P Q+ +F PEGV KI+L
Sbjct: 299 ILVFLPGWNLIFALMKFLQNTNIFGDTSQYQILPCHSQIPRDEQRKVFEPVPEGVTKIIL 358
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT 304
+TNIAETSITIDDIV+V+D K +M F +N+ + W S N +QR+GRAGR
Sbjct: 359 STNIAETSITIDDIVFVIDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGRV 415
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 312 QYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSS 371
Q + + ML + + V+ +++ +LL HI + PGAILVFLPGW+ I +L + + ++
Sbjct: 264 QKTRNAMAMLSESD---VSFELLEALLMHIKSKNIPGAILVFLPGWNLIFALMKFLQNTN 320
Query: 372 FFNSCLLYE 380
F Y+
Sbjct: 321 IFGDTSQYQ 329
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 5/51 (9%)
Query: 39 RKLQSRR-----YQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
R L+ RR Y++ LE R+KLP MR +L + +N + +I G TG G
Sbjct: 5 RSLRDRRQNDNEYRQFLEFREKLPIAAMRSEILTAINDNPVVIIRGNTGCG 55
>gi|384875317|gb|AFI26244.1| maleless [Drosophila melanogaster]
Length = 936
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 57/117 (48%), Positives = 81/117 (69%), Gaps = 1/117 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFLPGW+ I +L + + ++ F ++S++QI+P HS +P Q+ +F PEGV KI+L
Sbjct: 299 ILVFLPGWNLIFALMKFLQNTNIFGDTSQYQILPCHSQIPRDEQRKVFEPVPEGVTKIIL 358
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT 304
+TNIAETSITIDDIV+V+D K +M F +N+ + W S N +QR+GRAGR
Sbjct: 359 STNIAETSITIDDIVFVIDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGRV 415
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 312 QYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSS 371
Q + + ML + + V+ +++ +LL HI + PGAILVFLPGW+ I +L + + ++
Sbjct: 264 QKTRNAMAMLSESD---VSFELLEALLMHIKSKNIPGAILVFLPGWNLIFALMKFLQNTN 320
Query: 372 FFNSCLLYE 380
F Y+
Sbjct: 321 IFGDTSQYQ 329
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 5/51 (9%)
Query: 39 RKLQSRR-----YQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
R L+ RR Y++ LE R+KLP MR +L + +N + +I G TG G
Sbjct: 5 RSLRDRRQNDNEYRQFLEFREKLPIAAMRSEILTAINDNPVVIIRGNTGCG 55
>gi|340715187|ref|XP_003396100.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like [Bombus
terrestris]
Length = 1157
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 59/120 (49%), Positives = 77/120 (64%), Gaps = 2/120 (1%)
Query: 189 ILVFLPGWDTINSLHRSMC--QSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIV 246
+L+FLPG+D I ++ + + R+ + LHS + T QK +F P G RKI+
Sbjct: 587 LLIFLPGYDDIVTMREKINNEEKEMNKGLRYNLYVLHSNMQTCDQKKVFKPSPAGSRKII 646
Query: 247 LATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLK 306
L+TNIAETSITIDD+VYV+D GK K +FD + TLK WIS A AKQR+GRAGR K
Sbjct: 647 LSTNIAETSITIDDVVYVIDSGKVKEKSFDALSGVCTLKSNWISQACAKQRKGRAGRCRK 706
Score = 45.4 bits (106), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 48 EMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHLDFITLKRSETQQYP 103
++L RK LP + R+ +LD + NQ+ +I GETGSG + L+ + +Q P
Sbjct: 158 DVLNYRKALPIFSFREDILDALNTNQVVIIGGETGSGKTTQVPQFILEHCQQRQQP 213
>gi|395824901|ref|XP_003785689.1| PREDICTED: ATP-dependent RNA helicase A [Otolemur garnettii]
Length = 1271
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 77/115 (66%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPGW+ I ++ + + + F S R+QI+PLHS +P Q+ +F P GV K++L+
Sbjct: 654 VLVFLPGWNLICTMQKHLEMNPHFGSHRYQILPLHSQIPREEQRKVFEPVPIGVTKVILS 713
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+D+VYV+D K K+ F +N+ W S N +QR+GRAGR
Sbjct: 714 TNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGR 768
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 30/44 (68%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
++I SLL++I T PGA+LVFLPGW+ I ++ + + + F S
Sbjct: 636 ELIESLLKYIETLNVPGAVLVFLPGWNLICTMQKHLEMNPHFGS 679
>gi|350414377|ref|XP_003490298.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like [Bombus
impatiens]
Length = 1157
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 60/120 (50%), Positives = 77/120 (64%), Gaps = 2/120 (1%)
Query: 189 ILVFLPGWDTINSLHRSMC--QSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIV 246
+LVFLPG+D I ++ + + R+ + LHS + T QK +F P G RKI+
Sbjct: 587 LLVFLPGYDDIVTMREKINNEEKEMSKGLRYNLYVLHSNMQTCDQKKVFKPSPVGSRKII 646
Query: 247 LATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLK 306
L+TNIAETSITIDD+VYV+D GK K +FD + TLK WIS A AKQR+GRAGR K
Sbjct: 647 LSTNIAETSITIDDVVYVIDSGKVKEKSFDALSGVCTLKSNWISQACAKQRKGRAGRCRK 706
Score = 45.4 bits (106), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 48 EMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHLDFITLKRSETQQYP 103
++L RK LP + R+ +LD + NQ+ +I GETGSG + L+ + +Q P
Sbjct: 158 DVLNYRKALPIFSFREDILDALNTNQVVIIGGETGSGKTTQVPQFILEHCQQRQQP 213
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 308 SETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSM 367
SE ++ DV D + +N D++F L+ HI PG++LVFLPG+D I ++ +
Sbjct: 547 SEEDKFLLDVYQHTFDDD--KINYDLLFQLILHIHLKMPPGSLLVFLPGYDDIVTMREKI 604
>gi|505845262|ref|XP_004616113.1| PREDICTED: putative ATP-dependent RNA helicase DHX57 [Sorex
araneus]
Length = 1292
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 59/118 (50%), Positives = 79/118 (66%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN---SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVFLPG I L+ + +S FN S R + PLHS L + Q+++F PP GV KI
Sbjct: 756 ILVFLPGLAEIKMLYEQLQANSLFNNRRSDRCVVHPLHSSLSSEEQQAVFVRPPAGVTKI 815
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+++TNIAETS+TIDD+VYV+D GK K +D + +L+ ++S ANA QRRGRAGR
Sbjct: 816 IISTNIAETSVTIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRRGRAGR 873
Score = 42.4 bits (98), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 35/55 (63%)
Query: 30 DAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+A K+ K SR++Q +L+ R+ LP++ R+ +L ++ +Q+ V+SG TG G
Sbjct: 424 NARLCKQFRAKQNSRQFQAILQERQSLPAWGERETILRLLARHQVLVVSGMTGCG 478
>gi|332030651|gb|EGI70339.1| Dosage compensation regulator [Acromyrmex echinatior]
Length = 1202
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 57/115 (49%), Positives = 76/115 (66%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+L+FLPGW+ I +L + + Q S F S + IIPLHS LP Q+ +F+ P V KI+L+
Sbjct: 610 VLIFLPGWNLIFALMKHLQQHSLFGGSSYLIIPLHSQLPREDQRKVFDPVPSFVTKIILS 669
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+D+VYV+D K KM F +N+ W S N +QR+GRAGR
Sbjct: 670 TNIAETSITINDVVYVIDSCKAKMKLFTSHNNMTNYATVWASKTNLEQRKGRAGR 724
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNSCLLYEFAMVDNKPKE 390
++I +LL +I PGA+L+FLPGW+ I +L + + Q S F + P+E
Sbjct: 592 ELIEALLMYIKRQDIPGAVLIFLPGWNLIFALMKHLQQHSLFGGSSYLIIPLHSQLPRE 650
>gi|350582499|ref|XP_003481283.1| PREDICTED: putative ATP-dependent RNA helicase DHX57-like [Sus
scrofa]
Length = 610
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 59/118 (50%), Positives = 80/118 (67%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN---SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVFLPG I L+ + +S FN S+R + PLHS L + Q+++F PP GV KI
Sbjct: 316 ILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVVHPLHSSLSSEEQQAVFVKPPVGVTKI 375
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+++TNIAETSITIDD+VYV+D GK K +D + +L+ ++S ANA QR+GRAGR
Sbjct: 376 IISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGR 433
>gi|443688667|gb|ELT91287.1| hypothetical protein CAPTEDRAFT_220258 [Capitella teleta]
Length = 1221
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 55/118 (46%), Positives = 78/118 (66%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL+FLPGW I +L R + + S R++++PLHS +P Q+ +F+ PEGV KI+L+
Sbjct: 656 ILIFLPGWSLIFALQRFLSEHPSIGSQRYRLLPLHSQIPREEQRRVFDPVPEGVTKIILS 715
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLK 306
TNIAE+SITI+D+V+V+D K KM F +N+ W S N +QR+GRAGR K
Sbjct: 716 TNIAESSITINDVVFVIDSCKAKMKLFTSHNNMTNYATVWCSKTNLEQRQGRAGRVRK 773
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 26/38 (68%)
Query: 47 QEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
++M E R KLP DA++ + NNQ+TVI GETGSG
Sbjct: 373 KQMTEDRFKLPVSNSYDAIISAIENNQVTVIRGETGSG 410
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 27/38 (71%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQ 369
+++ SL+++I + PGAIL+FLPGW I +L R + +
Sbjct: 638 ELVTSLIEYIKSLGEPGAILIFLPGWSLIFALQRFLSE 675
>gi|328785633|ref|XP_003250627.1| PREDICTED: dosage compensation regulator isoform 1 [Apis mellifera]
Length = 1232
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 56/115 (48%), Positives = 75/115 (65%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL+FLPGW+ I +L + + Q + + IIPLHS LP Q+ +F+ P G+ KI+LA
Sbjct: 643 ILIFLPGWNLIFALMKHLQQHPIYGGINYVIIPLHSQLPREDQRKVFDPVPSGITKIILA 702
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+D+VYV+D K KM F +N+ W S N +QR+GRAGR
Sbjct: 703 TNIAETSITINDVVYVIDSCKAKMKLFTSHNNMTNYATVWASKTNLEQRKGRAGR 757
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 16/101 (15%)
Query: 288 WISLANAKQRRGRAGRTLKRSETQQYPNDVLNMLKDPEL-------------EGVNNDVI 334
+I ++K+R+ R L T+ P + LN + DPE + ++ ++I
Sbjct: 571 FIPPMDSKKRKNRDSDDLP---TEGEPEENLNKIIDPEYSIQTKNAMAQLSEKEISFELI 627
Query: 335 FSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
+LL++I PGAIL+FLPGW+ I +L + + Q +
Sbjct: 628 EALLKYINDQSIPGAILIFLPGWNLIFALMKHLQQHPIYGG 668
>gi|119569363|gb|EAW48978.1| YTH domain containing 2, isoform CRA_a [Homo sapiens]
Length = 898
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 57/115 (49%), Positives = 78/115 (67%), Gaps = 4/115 (3%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+L+FLPG+D I L + F+ R+Q+ LHS + T QK + PP GVRKI+L+
Sbjct: 100 VLIFLPGYDEIVGLRDRI----LFDDKRYQVFMLHSNMQTSDQKKVLKNPPAGVRKIILS 155
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSIT++D+V+V+D GK K +FD + + LK WIS A+A QR+GRAGR
Sbjct: 156 TNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGR 210
>gi|66510919|ref|XP_396525.2| PREDICTED: dosage compensation regulator isoform 2 [Apis mellifera]
Length = 1239
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 56/115 (48%), Positives = 75/115 (65%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL+FLPGW+ I +L + + Q + + IIPLHS LP Q+ +F+ P G+ KI+LA
Sbjct: 650 ILIFLPGWNLIFALMKHLQQHPIYGGINYVIIPLHSQLPREDQRKVFDPVPSGITKIILA 709
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+D+VYV+D K KM F +N+ W S N +QR+GRAGR
Sbjct: 710 TNIAETSITINDVVYVIDSCKAKMKLFTSHNNMTNYATVWASKTNLEQRKGRAGR 764
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 16/101 (15%)
Query: 288 WISLANAKQRRGRAGRTLKRSETQQYPNDVLNMLKDPEL-------------EGVNNDVI 334
+I ++K+R+ R L T+ P + LN + DPE + ++ ++I
Sbjct: 578 FIPPMDSKKRKNRDSDDLP---TEGEPEENLNKIIDPEYSIQTKNAMAQLSEKEISFELI 634
Query: 335 FSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
+LL++I PGAIL+FLPGW+ I +L + + Q +
Sbjct: 635 EALLKYINDQSIPGAILIFLPGWNLIFALMKHLQQHPIYGG 675
>gi|389601273|ref|XP_003723173.1| putative ATP-dependent DEAD/H RNA helicase [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|322504972|emb|CBZ14709.1| putative ATP-dependent DEAD/H RNA helicase [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 1083
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 61/115 (53%), Positives = 76/115 (66%), Gaps = 2/115 (1%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGW I+S+ + +S F + I+ LHS L T Q+ +F PP+ RK+VLA
Sbjct: 416 ILVFLPGWGAISSIASRLRRSHF--ARELSILLLHSTLTTAEQQRVFERPPKHYRKVVLA 473
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
T+IAETSITIDDIVYV+D G K S++D N + LK I AN QRRGRAGR
Sbjct: 474 TSIAETSITIDDIVYVIDSGLVKGSSYDPMGNTSALKATLIGKANGVQRRGRAGR 528
>gi|307197900|gb|EFN78999.1| Uncharacterized protein KIAA0564-like protein [Harpegnathos
saltator]
Length = 2886
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 59/117 (50%), Positives = 77/117 (65%), Gaps = 2/117 (1%)
Query: 189 ILVFLPGWDTINSLHRSM-CQSSFFNSS-RFQIIPLHSMLPTVSQKSIFNTPPEGVRKIV 246
IL+FLPG+D I ++ + + N R+ + LHS + T QK +F + P G RKI+
Sbjct: 584 ILIFLPGYDDIVTMRDKINAEEKRMNQGLRYSLYVLHSNMQTCDQKKVFKSSPHGTRKII 643
Query: 247 LATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
L+TNIAETSITIDD+VYV+D GK K +FD + TL WIS A AKQR+GRAGR
Sbjct: 644 LSTNIAETSITIDDVVYVIDSGKIKEKSFDAISGVCTLTSNWISQACAKQRKGRAGR 700
>gi|523563165|emb|CCM23632.1| ATP-dependent DEAD/H RNA helicase, putative [Leishmania guyanensis]
Length = 954
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 61/115 (53%), Positives = 76/115 (66%), Gaps = 2/115 (1%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGW I+S+ + +S F + I+ LHS L T Q+ +F PP+ RK+VLA
Sbjct: 287 ILVFLPGWGAISSIASRLRRSHF--ARELSILLLHSTLTTAEQQRVFERPPKHYRKVVLA 344
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
T+IAETSITIDDIVYV+D G K S++D N + LK I AN QRRGRAGR
Sbjct: 345 TSIAETSITIDDIVYVIDSGLVKGSSYDPMGNTSALKATLIGKANGVQRRGRAGR 399
>gi|465976861|gb|EMP34463.1| ATP-dependent RNA helicase A [Chelonia mydas]
Length = 1287
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 53/115 (46%), Positives = 78/115 (67%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPGW+ I ++ + + + F S R++I+PLHS +P Q+ +F+ P GV K++L+
Sbjct: 612 VLVFLPGWNLIYTMQKHLEMNPHFGSHRYRILPLHSQIPRDEQRRVFDPVPSGVTKVILS 671
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+D+VYV+D K K+ F +N+ W S N +QR+GRAGR
Sbjct: 672 TNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGR 726
Score = 42.4 bits (98), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 30/44 (68%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
++I +LL++I T PGA+LVFLPGW+ I ++ + + + F S
Sbjct: 594 ELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHFGS 637
>gi|302815554|ref|XP_002989458.1| hypothetical protein SELMODRAFT_428040 [Selaginella moellendorffii]
gi|300142852|gb|EFJ09549.1| hypothetical protein SELMODRAFT_428040 [Selaginella moellendorffii]
Length = 350
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 79/118 (66%), Gaps = 1/118 (0%)
Query: 187 VPILVFLPGWDTINSLHRSMCQSSFFNS-SRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
V +LVFLPG I L + F+ + I+PLHS + Q+ +F PP GVRKI
Sbjct: 166 VALLVFLPGMPEILQLLDRLLVLKDFSGPASDWILPLHSSVAPADQRKVFQVPPNGVRKI 225
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
VLATNIAETS+TI+D+V+V+DCGK K + FD + ++ + WIS ANA+QRRGRAGR
Sbjct: 226 VLATNIAETSVTIEDVVHVIDCGKHKENRFDPRRRMSRMAEAWISQANAQQRRGRAGR 283
>gi|359320707|ref|XP_531871.3| PREDICTED: probable ATP-dependent RNA helicase YTHDC2 [Canis lupus
familiaris]
Length = 1374
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 80/118 (67%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLH-RSMCQSSFF--NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
IL+FLPG+D I L R + F N+ R+Q+ LHS + T QK + PP GVRKI
Sbjct: 624 ILIFLPGYDEIVGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKI 683
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+L+TNIAETSIT++D+V+V+D GK K +FD + + LK WIS A+A QR+GRAGR
Sbjct: 684 ILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAVQRKGRAGR 741
>gi|322801029|gb|EFZ21810.1| hypothetical protein SINV_15664 [Solenopsis invicta]
Length = 552
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 57/115 (49%), Positives = 76/115 (66%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+L+FLPGW+ I +L + + Q S F S + IIPLHS LP Q+ +F+ P V KI+L+
Sbjct: 366 VLIFLPGWNLIFALMKHLQQHSVFGGSSYLIIPLHSQLPREDQRKVFDPVPPYVTKIILS 425
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+D+VYV+D K KM F +N+ W S N +QR+GRAGR
Sbjct: 426 TNIAETSITINDVVYVIDSCKAKMKLFTSHNNMTNYATVWASKTNLEQRKGRAGR 480
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 44/92 (47%)
Query: 299 GRAGRTLKRSETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWD 358
G L + YP + N + + ++ ++I +LL ++ + PGA+L+FLPGW+
Sbjct: 315 GEPEENLNKVIGNNYPIETKNAMAQLTEKEISFELIEALLIYVKKQEIPGAVLIFLPGWN 374
Query: 359 TINSLHRSMCQSSFFNSCLLYEFAMVDNKPKE 390
I +L + + Q S F + P+E
Sbjct: 375 LIFALMKHLQQHSVFGGSSYLIIPLHSQLPRE 406
>gi|348574620|ref|XP_003473088.1| PREDICTED: putative ATP-dependent RNA helicase DHX57 isoform 1
[Cavia porcellus]
Length = 1382
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 58/118 (49%), Positives = 80/118 (67%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN---SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
+LVFLPG I L+ + + FN S+R I PLHS L + Q+++F PP GV KI
Sbjct: 846 VLVFLPGLAEIKMLYEQLQSNCLFNNRRSNRCIIHPLHSSLSSEEQQAVFIKPPVGVTKI 905
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+++TNIAETS+TIDD+VYV+DCGK K +D + +L+ ++S ANA QR+GRAGR
Sbjct: 906 IISTNIAETSVTIDDVVYVIDCGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGR 963
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 34/50 (68%)
Query: 35 KEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
K+ K SR++Q +L+ R+ LP+++ R+ +L ++ +Q+ VISG TG G
Sbjct: 519 KQFQMKQASRQFQSVLQERQSLPAWEERENILKLLSKHQVVVISGMTGCG 568
>gi|300796442|ref|NP_001179740.1| probable ATP-dependent RNA helicase YTHDC2 [Bos taurus]
gi|296483779|tpg|DAA25894.1| TPA: YTH domain containing 2-like [Bos taurus]
gi|440900126|gb|ELR51325.1| Putative ATP-dependent RNA helicase YTHDC2 [Bos grunniens mutus]
Length = 1429
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 80/118 (67%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLH-RSMCQSSFF--NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
IL+FLPG+D I L R + F N+ R+Q+ LHS + T QK + PP GVRKI
Sbjct: 624 ILIFLPGYDEIVGLRDRILFDDKRFAENAHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKI 683
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+L+TNIAETSIT++D+V+V+D GK K +FD + + LK WIS A+A QR+GRAGR
Sbjct: 684 ILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGR 741
>gi|511989911|ref|XP_004812670.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2 isoform X2
[Mustela putorius furo]
Length = 1368
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 80/118 (67%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLH-RSMCQSSFF--NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
IL+FLPG+D I L R + F N+ R+Q+ LHS + T QK + PP GVRKI
Sbjct: 624 ILIFLPGYDEIVGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKI 683
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+L+TNIAETSIT++D+V+V+D GK K +FD + + LK WIS A+A QR+GRAGR
Sbjct: 684 ILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGR 741
>gi|3650397|emb|CAA77038.1| maleless protein [Sciara ocellaris]
Length = 1252
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 58/115 (50%), Positives = 77/115 (66%), Gaps = 1/115 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPGW+ I +L + + QS F S F+I+P HS +P Q+ +F P GV KI+L+
Sbjct: 653 VLVFLPGWNLIFALMKHL-QSGRFGGSDFRILPCHSQIPREDQRKVFEPVPPGVTKIILS 711
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITIDDIVYV+D K +M F +N+ + W S N +QR+GRAGR
Sbjct: 712 TNIAETSITIDDIVYVIDICKARMKLFTSHNNMTSYATVWASKTNLEQRKGRAGR 766
>gi|157824888|gb|ABV82523.1| maleless [Drosophila melanogaster]
Length = 1293
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 57/116 (49%), Positives = 81/116 (69%), Gaps = 1/116 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFLPGW+ I +L + + ++ F ++S++QI+P HS +P Q+ +F PEGV KI+L
Sbjct: 656 ILVFLPGWNLIFALMKFLQNTNIFGDTSQYQILPCHSQIPRDEQRKVFEPVPEGVTKIIL 715
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+TNIAETSITIDDIV+V+D K +M F +N+ + W S N +QR+GRAGR
Sbjct: 716 STNIAETSITIDDIVFVIDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGR 771
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 312 QYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSS 371
Q + + ML + + V+ +++ +LL HI + PGAILVFLPGW+ I +L + + ++
Sbjct: 621 QKTRNAMAMLSESD---VSFELLEALLMHIKSKNIPGAILVFLPGWNLIFALMKFLQNTN 677
Query: 372 FFNSCLLYE 380
F Y+
Sbjct: 678 IFGDTSQYQ 686
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 5/51 (9%)
Query: 39 RKLQSRR-----YQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
R L+ RR Y++ LE R+KLP MR +L + +N + +I G TG G
Sbjct: 362 RSLRDRRQNDNEYRQFLEFREKLPIAAMRSEILTAINDNPVVIIRGNTGCG 412
>gi|507649089|ref|XP_004632284.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2 [Octodon
degus]
Length = 1433
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 80/118 (67%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLH-RSMCQSSFFNSS--RFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
+L+FLPG+D I L R + F S R+Q+ LHS + T QK + TPP GVRKI
Sbjct: 628 VLIFLPGYDEIVGLRDRILFDDKRFADSTHRYQVFMLHSNMQTSDQKKVLKTPPAGVRKI 687
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+L+TNIAETSIT++D+V+V+D GK K +FD + + LK WIS A+A QR+GRAGR
Sbjct: 688 ILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAVQRKGRAGR 745
>gi|471358021|ref|XP_004369598.1| PREDICTED: putative ATP-dependent RNA helicase DHX57 [Trichechus
manatus latirostris]
Length = 1385
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 80/118 (67%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN---SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVFLPG I L+ + +S FN S+R I PLHS L + Q+++F PP GV KI
Sbjct: 849 ILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLHSSLSSEEQQTVFVKPPVGVTKI 908
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+++TNIAETSITIDD+VYV+D GK K +D + +L+ ++S ANA QR+GRAGR
Sbjct: 909 IISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGR 966
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 36/55 (65%)
Query: 30 DAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+A K+ K SR++Q +L+ R+ LP+++ R+ +L ++ +Q+ VISG TG G
Sbjct: 517 NAKICKQFRIKQASRQFQSILQERQSLPAWEERETILKLLSKHQVLVISGMTGCG 571
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 313 YPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQR---PGAILVFLPGWDTINSLHRSMCQ 369
+ V+ + + E VN ++I +LL+ I + PGAILVFLPG I L+ +
Sbjct: 809 FSKSVIKTMSIMDFEKVNLELIEALLEWIMDGKHSYPPGAILVFLPGLAEIKMLYEQLQS 868
Query: 370 SSFFNS 375
+S FN+
Sbjct: 869 NSLFNN 874
>gi|389742226|gb|EIM83413.1| P-loop containing nucleoside triphosphate hydrolase protein
[Stereum hirsutum FP-91666 SS1]
Length = 1321
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 56/119 (47%), Positives = 80/119 (67%), Gaps = 4/119 (3%)
Query: 189 ILVFLPGWDTINSLHRSMCQSS----FFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRK 244
+LVFLPGW+ I++L+R + + F + S++ I LHS +P Q+ IF PP GVR+
Sbjct: 695 VLVFLPGWEDISALNRMLQERPLGLPFNDKSKYSIHLLHSTVPVAEQQVIFEPPPAGVRR 754
Query: 245 IVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
I+LATNIAETS+TI D+VYVVD K K +D + ++++L W+ +N QR GRAGR
Sbjct: 755 IILATNIAETSVTIPDVVYVVDSAKVKEQRYDPQRHMSSLVSAWVGSSNLNQRAGRAGR 813
>gi|157824882|gb|ABV82520.1| maleless [Drosophila melanogaster]
Length = 1293
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 57/116 (49%), Positives = 81/116 (69%), Gaps = 1/116 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFLPGW+ I +L + + ++ F ++S++QI+P HS +P Q+ +F PEGV KI+L
Sbjct: 656 ILVFLPGWNLIFALMKFLQNTNIFGDTSQYQILPCHSQIPRDEQRKVFEPVPEGVTKIIL 715
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+TNIAETSITIDDIV+V+D K +M F +N+ + W S N +QR+GRAGR
Sbjct: 716 STNIAETSITIDDIVFVIDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGR 771
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 312 QYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSS 371
Q + + ML + + V+ +++ +LL HI + PGAILVFLPGW+ I +L + + ++
Sbjct: 621 QKTRNAMAMLSESD---VSFELLEALLMHIKSKNIPGAILVFLPGWNLIFALMKFLQNTN 677
Query: 372 FFNSCLLYE 380
F Y+
Sbjct: 678 IFGDTSQYQ 686
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 5/51 (9%)
Query: 39 RKLQSRR-----YQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
R L+ RR Y++ LE R+KLP MR +L + +N + +I G TG G
Sbjct: 362 RSLRDRRQNDNEYRQFLEFREKLPIAAMRSEILTAINDNPVVIIRGNTGCG 412
>gi|157824876|gb|ABV82517.1| maleless [Drosophila melanogaster]
Length = 1293
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 57/116 (49%), Positives = 81/116 (69%), Gaps = 1/116 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFLPGW+ I +L + + ++ F ++S++QI+P HS +P Q+ +F PEGV KI+L
Sbjct: 656 ILVFLPGWNLIFALMKFLQNTNIFGDTSQYQILPCHSQIPRDEQRKVFEPVPEGVTKIIL 715
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+TNIAETSITIDDIV+V+D K +M F +N+ + W S N +QR+GRAGR
Sbjct: 716 STNIAETSITIDDIVFVIDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGR 771
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 312 QYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSS 371
Q + + ML + + V+ +++ +LL HI + PGAILVFLPGW+ I +L + + ++
Sbjct: 621 QKTRNAMAMLSESD---VSFELLEALLMHIKSKNIPGAILVFLPGWNLIFALMKFLQNTN 677
Query: 372 FFNSCLLYE 380
F Y+
Sbjct: 678 IFGDTSQYQ 686
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 5/51 (9%)
Query: 39 RKLQSRR-----YQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
R L+ RR Y++ LE R+KLP MR +L + +N + +I G TG G
Sbjct: 362 RSLRDRRQNDNEYRQFLEFREKLPIAAMRSEILTAINDNPVVIIRGNTGCG 412
>gi|329665076|ref|NP_001192980.1| putative ATP-dependent RNA helicase DHX57 [Bos taurus]
gi|296482642|tpg|DAA24757.1| TPA: DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57 [Bos taurus]
Length = 1383
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 80/118 (67%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN---SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVFLPG I L+ + +S FN S+R I PLHS L + Q+++F PP GV KI
Sbjct: 846 ILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLHSSLSSEEQQAVFVKPPMGVTKI 905
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+++TNIAETSITIDD+VYV+D GK K +D + +L+ ++S ANA QR+GRAGR
Sbjct: 906 IISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGR 963
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 32/45 (71%)
Query: 40 KLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
K SR++Q +L+ R+ LP+++ R+ +L ++ +Q+ V+SG TG G
Sbjct: 524 KQASRQFQSVLQERQSLPAWEERENILKLLSKHQVLVVSGMTGCG 568
Score = 39.7 bits (91), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 311 QQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQR---PGAILVFLPGWDTINSLHRSM 367
Q V+ + + E VN ++I +LL+ I + PGAILVFLPG I L+ +
Sbjct: 804 QGVSKSVIKTMSVMDFEKVNLELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQL 863
Query: 368 CQSSFFNS 375
+S FN+
Sbjct: 864 QSNSLFNN 871
>gi|440907654|gb|ELR57774.1| Putative ATP-dependent RNA helicase DHX57 [Bos grunniens mutus]
Length = 1383
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 80/118 (67%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN---SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVFLPG I L+ + +S FN S+R I PLHS L + Q+++F PP GV KI
Sbjct: 846 ILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLHSSLSSEEQQAVFVKPPMGVTKI 905
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+++TNIAETSITIDD+VYV+D GK K +D + +L+ ++S ANA QR+GRAGR
Sbjct: 906 IISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGR 963
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 32/45 (71%)
Query: 40 KLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
K SR++Q +L+ R+ LP+++ R+ +L ++ +Q+ V+SG TG G
Sbjct: 524 KQASRQFQSVLQERQSLPAWEERENILKLLSKHQVLVVSGMTGCG 568
Score = 39.7 bits (91), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 311 QQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQR---PGAILVFLPGWDTINSLHRSM 367
Q V+ + + E VN ++I +LL+ I + PGAILVFLPG I L+ +
Sbjct: 804 QGVSKSVIKTMSVMDFEKVNLELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQL 863
Query: 368 CQSSFFNS 375
+S FN+
Sbjct: 864 QSNSLFNN 871
>gi|511891777|ref|XP_004765578.1| PREDICTED: putative ATP-dependent RNA helicase DHX57 isoform X7
[Mustela putorius furo]
gi|511990209|ref|XP_004812811.1| PREDICTED: putative ATP-dependent RNA helicase DHX57 isoform X7
[Mustela putorius furo]
Length = 1158
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 59/118 (50%), Positives = 79/118 (66%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN---SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVFLPG I L+ + +S FN S R + PLHS L + Q+++F PP GV KI
Sbjct: 622 ILVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVVHPLHSSLSSEEQQAVFVKPPAGVTKI 681
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+++TNIAETSITIDD+VYV+D GK K +D + +L+ ++S ANA QR+GRAGR
Sbjct: 682 IISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGR 739
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 36/55 (65%)
Query: 30 DAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+A K+ K SR++Q +L+ R+ LP+++ R+ +L ++ +Q+ VISG TG G
Sbjct: 290 NAKICKQFRIKQASRQFQSILQERQSLPAWEERETILKLLSEHQVLVISGMTGCG 344
>gi|395510586|ref|XP_003759555.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2, partial
[Sarcophilus harrisii]
Length = 1420
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 59/118 (50%), Positives = 80/118 (67%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLH-RSMCQSSFF--NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
IL+FLPG+D I L R + F N+ R+Q+ LHS + T QK + PP G+RKI
Sbjct: 615 ILIFLPGYDEIVGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVLKNPPSGIRKI 674
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+L+TNIAETSIT++D+V+V+D GK K +FD + + LK WIS A+A QR+GRAGR
Sbjct: 675 ILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNYVTMLKMVWISKASAIQRKGRAGR 732
>gi|321478026|gb|EFX88984.1| hypothetical protein DAPPUDRAFT_41608 [Daphnia pulex]
Length = 562
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 65/153 (42%), Positives = 91/153 (59%), Gaps = 14/153 (9%)
Query: 153 MKVFFCKNVLQRLMKGVGANSPKRWVKLLRSMLVVPILVFLPGWDTINSLHRSMCQSSFF 212
+K +++L +L++ + N P + ILVFLPGW I +LH + F+
Sbjct: 224 LKPMVDQDLLVKLVRHIDLNKPSQG----------SILVFLPGWADIKNLHSKL---KFY 270
Query: 213 NSSRFQ-IIPLHSMLPTVSQKSIFNTPPEGVRKIVLATNIAETSITIDDIVYVVDCGKTK 271
S I+P+HS L Q+ IF+ PPEGVRKIVLATNIAETS+TI D VYV+D G K
Sbjct: 271 PSEETHWILPVHSRLSQTEQERIFDRPPEGVRKIVLATNIAETSLTIPDCVYVIDPGVHK 330
Query: 272 MSNFDVKDNIATLKPEWISLANAKQRRGRAGRT 304
++ + A ++ +W+S AN +QR GRAGR
Sbjct: 331 ELRYNSQRGTAVMENQWVSKANVQQRAGRAGRV 363
>gi|170058514|ref|XP_001864955.1| ATP-dependent RNA helicase A [Culex quinquefasciatus]
gi|167877587|gb|EDS40970.1| ATP-dependent RNA helicase A [Culex quinquefasciatus]
Length = 1045
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 70/203 (34%), Positives = 102/203 (50%), Gaps = 52/203 (25%)
Query: 101 QYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVYCTYTFMGVSPMKVFFCKN 160
QYP VL + +P E ND+I L+ HI T+ GA
Sbjct: 498 QYPAKVLQTIANPLSESSQNDLITELIYHISATKPDGA---------------------- 535
Query: 161 VLQRLMKGVGANSPKRWVKLLRSMLVVPILVFLPGWDTINSLHRSMCQSSFFNSSRFQII 220
ILVFLP I+ + + + + I
Sbjct: 536 ----------------------------ILVFLPSLAQISDVQKLLSAHRDLSRMSTLIY 567
Query: 221 PLHSMLPTVSQKSIFNTPPEGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDN 280
PLHS +P + QK++F+ P +G RKI+LATNIAETSITIDD+V+VV+ G+ K++ F+ +
Sbjct: 568 PLHSKVPQLDQKAVFSRPQKGTRKIILATNIAETSITIDDVVFVVNAGRHKINMFE--EG 625
Query: 281 IATLKPEWISLANAKQRRGRAGR 303
+++L+ EWIS++N QR+GRAGR
Sbjct: 626 VSSLRDEWISISNEIQRKGRAGR 648
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 35/66 (53%), Gaps = 6/66 (9%)
Query: 312 QYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTIN------SLHR 365
QYP VL + +P E ND+I L+ HI T+ GAILVFLP I+ S HR
Sbjct: 498 QYPAKVLQTIANPLSESSQNDLITELIYHISATKPDGAILVFLPSLAQISDVQKLLSAHR 557
Query: 366 SMCQSS 371
+ + S
Sbjct: 558 DLSRMS 563
>gi|426233785|ref|XP_004010894.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2 [Ovis aries]
Length = 1431
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 80/118 (67%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLH-RSMCQSSFF--NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
IL+FLPG+D I L R + F N+ R+Q+ LHS + T QK + PP GVRKI
Sbjct: 626 ILIFLPGYDEIVGLRDRILFDDKRFADNAHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKI 685
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+L+TNIAETSIT++D+V+V+D GK K +FD + + LK WIS A+A QR+GRAGR
Sbjct: 686 ILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGR 743
>gi|255086581|ref|XP_002509257.1| predicted protein [Micromonas sp. RCC299]
gi|226524535|gb|ACO70515.1| predicted protein [Micromonas sp. RCC299]
Length = 809
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 56/115 (48%), Positives = 77/115 (66%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL+FLPG I LH + S RF +IPLHS L + Q+ F+ P GVRK+V+A
Sbjct: 268 ILIFLPGMAEIRGLHERLASSLDDVEKRFILIPLHSTLSSEEQRLTFSKPLPGVRKVVMA 327
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITIDD+V+V+D G+ + + +D +++L W S A+++QRRGRAGR
Sbjct: 328 TNIAETSITIDDVVFVIDSGRVRETQYDPTSRMSSLVTAWCSRASSRQRRGRAGR 382
>gi|157382868|gb|ABV48869.1| maleless [Drosophila melanogaster]
gi|157382870|gb|ABV48870.1| maleless [Drosophila melanogaster]
gi|157382876|gb|ABV48873.1| maleless [Drosophila melanogaster]
Length = 1293
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 57/116 (49%), Positives = 81/116 (69%), Gaps = 1/116 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFLPGW+ I +L + + ++ F ++S++QI+P HS +P Q+ +F PEGV KI+L
Sbjct: 656 ILVFLPGWNLIFALMKFLQNTNIFGDTSQYQILPCHSQIPRDEQRKVFEPVPEGVTKIIL 715
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+TNIAETSITIDDIV+V+D K +M F +N+ + W S N +QR+GRAGR
Sbjct: 716 STNIAETSITIDDIVFVIDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGR 771
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 312 QYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSS 371
Q + + ML + + V+ +++ +LL HI + PGAILVFLPGW+ I +L + + ++
Sbjct: 621 QKTRNAMAMLSESD---VSFELLEALLMHIKSKNIPGAILVFLPGWNLIFALMKFLQNTN 677
Query: 372 FFNSCLLYE 380
F Y+
Sbjct: 678 IFGDTSQYQ 686
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 5/51 (9%)
Query: 39 RKLQSRR-----YQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
R L+ RR Y++ LE R+KLP MR +L + +N + +I G TG G
Sbjct: 362 RSLRDRRQNDNEYRQFLEFREKLPIAAMRSEILTAINDNPVVIIRGNTGCG 412
>gi|157824878|gb|ABV82518.1| maleless [Drosophila melanogaster]
gi|157824880|gb|ABV82519.1| maleless [Drosophila melanogaster]
Length = 1293
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 57/116 (49%), Positives = 81/116 (69%), Gaps = 1/116 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFLPGW+ I +L + + ++ F ++S++QI+P HS +P Q+ +F PEGV KI+L
Sbjct: 656 ILVFLPGWNLIFALMKFLQNTNIFGDTSQYQILPCHSQIPRDEQRKVFEPVPEGVTKIIL 715
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+TNIAETSITIDDIV+V+D K +M F +N+ + W S N +QR+GRAGR
Sbjct: 716 STNIAETSITIDDIVFVIDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGR 771
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 312 QYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSS 371
Q + + ML + + V+ +++ +LL HI + PGAILVFLPGW+ I +L + + ++
Sbjct: 621 QKTRNAMAMLSESD---VSFELLEALLMHIKSKNIPGAILVFLPGWNLIFALMKFLQNTN 677
Query: 372 FFNSCLLYE 380
F Y+
Sbjct: 678 IFGDTSQYQ 686
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 5/51 (9%)
Query: 39 RKLQSRR-----YQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
R L+ RR Y++ LE R+KLP MR +L + +N + +I G TG G
Sbjct: 362 RSLRDRRQNDNEYRQFLEFREKLPIAAMRSEILTAINDNPVVIIRGNTGCG 412
>gi|511878314|ref|XP_004759112.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2 isoform X2
[Mustela putorius furo]
Length = 1324
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 80/118 (67%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLH-RSMCQSSFF--NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
IL+FLPG+D I L R + F N+ R+Q+ LHS + T QK + PP GVRKI
Sbjct: 580 ILIFLPGYDEIVGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKI 639
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+L+TNIAETSIT++D+V+V+D GK K +FD + + LK WIS A+A QR+GRAGR
Sbjct: 640 ILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGR 697
>gi|507562699|ref|XP_004665037.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2 [Jaculus
jaculus]
Length = 1377
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 80/118 (67%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLH-RSMCQSSFF--NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
IL+FLPG+D I L R + F N+ R+Q+ LHS + T QK + PP GVRKI
Sbjct: 635 ILIFLPGYDEIVGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKI 694
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+L+TNIAETSIT++D+V+V+D GK K +FD + + LK WIS A+A QR+GRAGR
Sbjct: 695 ILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGR 752
>gi|157906|gb|AAC41573.1| maleless protein [Drosophila melanogaster]
Length = 1293
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 57/116 (49%), Positives = 81/116 (69%), Gaps = 1/116 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFLPGW+ I +L + + ++ F ++S++QI+P HS +P Q+ +F PEGV KI+L
Sbjct: 656 ILVFLPGWNLIFALMKFLQNTNIFGDTSQYQILPCHSQIPRDEQRKVFEPVPEGVTKIIL 715
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+TNIAETSITIDDIV+V+D K +M F +N+ + W S N +QR+GRAGR
Sbjct: 716 STNIAETSITIDDIVFVIDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGR 771
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 312 QYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSS 371
Q + + ML + + V+ +++ +LL HI + PGAILVFLPGW+ I +L + + ++
Sbjct: 621 QKTRNAMAMLSESD---VSFELLEALLMHIKSKNIPGAILVFLPGWNLIFALMKFLQNTN 677
Query: 372 FFNSCLLYE 380
F Y+
Sbjct: 678 IFGDTSQYQ 686
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 5/51 (9%)
Query: 39 RKLQSRR-----YQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
R L+ RR Y++ LE R+KLP MR +L + +N + +I G TG G
Sbjct: 362 RSLRDRRQNDNEYRQFLEFREKLPIAAMRSEILTAINDNPVVIIRGNTGCG 412
>gi|157382860|gb|ABV48865.1| maleless [Drosophila melanogaster]
gi|157382864|gb|ABV48867.1| maleless [Drosophila melanogaster]
gi|157382878|gb|ABV48874.1| maleless [Drosophila melanogaster]
gi|384875315|gb|AFI26242.1| maleless [Drosophila melanogaster]
Length = 1293
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 57/116 (49%), Positives = 81/116 (69%), Gaps = 1/116 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFLPGW+ I +L + + ++ F ++S++QI+P HS +P Q+ +F PEGV KI+L
Sbjct: 656 ILVFLPGWNLIFALMKFLQNTNIFGDTSQYQILPCHSQIPRDEQRKVFEPVPEGVTKIIL 715
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+TNIAETSITIDDIV+V+D K +M F +N+ + W S N +QR+GRAGR
Sbjct: 716 STNIAETSITIDDIVFVIDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGR 771
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 312 QYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSS 371
Q + + ML + + V+ +++ +LL HI + PGAILVFLPGW+ I +L + + ++
Sbjct: 621 QKTRNAMAMLSESD---VSFELLEALLMHIKSKNIPGAILVFLPGWNLIFALMKFLQNTN 677
Query: 372 FFNSCLLYE 380
F Y+
Sbjct: 678 IFGDTSQYQ 686
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 5/51 (9%)
Query: 39 RKLQSRR-----YQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
R L+ RR Y++ LE R+KLP MR +L + +N + +I G TG G
Sbjct: 362 RSLRDRRQNDNEYRQFLEFREKLPIAAMRSEILTAINDNPVVIIRGNTGCG 412
>gi|157382852|gb|ABV48861.1| maleless [Drosophila melanogaster]
Length = 1293
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 57/116 (49%), Positives = 81/116 (69%), Gaps = 1/116 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFLPGW+ I +L + + ++ F ++S++QI+P HS +P Q+ +F PEGV KI+L
Sbjct: 656 ILVFLPGWNLIFALMKFLQNTNIFGDTSQYQILPCHSQIPRDEQRKVFEPVPEGVTKIIL 715
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+TNIAETSITIDDIV+V+D K +M F +N+ + W S N +QR+GRAGR
Sbjct: 716 STNIAETSITIDDIVFVIDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGR 771
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 312 QYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSS 371
Q + + ML + + V+ +++ +LL HI + PGAILVFLPGW+ I +L + + ++
Sbjct: 621 QKTRNAMAMLSESD---VSFELLEALLMHIKSKNIPGAILVFLPGWNLIFALMKFLQNTN 677
Query: 372 FFNSCLLYE 380
F Y+
Sbjct: 678 IFGDTSQYQ 686
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 5/51 (9%)
Query: 39 RKLQSRR-----YQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
R L+ RR Y++ LE R+KLP MR +L + +N + +I G TG G
Sbjct: 362 RSLRDRRQNDNEYRQFLEFREKLPIAAMRSEILTAINDNPVVIIRGNTGCG 412
>gi|17136342|ref|NP_476641.1| maleless, isoform A [Drosophila melanogaster]
gi|76803804|sp|P24785.2|MLE_DROME RecName: Full=Dosage compensation regulator; AltName:
Full=ATP-dependent RNA helicase mle; AltName:
Full=Protein male-less; AltName: Full=Protein maleless;
AltName: Full=Protein no action potential
gi|7302201|gb|AAF57297.1| maleless, isoform A [Drosophila melanogaster]
Length = 1293
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 57/116 (49%), Positives = 81/116 (69%), Gaps = 1/116 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFLPGW+ I +L + + ++ F ++S++QI+P HS +P Q+ +F PEGV KI+L
Sbjct: 656 ILVFLPGWNLIFALMKFLQNTNIFGDTSQYQILPCHSQIPRDEQRKVFEPVPEGVTKIIL 715
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+TNIAETSITIDDIV+V+D K +M F +N+ + W S N +QR+GRAGR
Sbjct: 716 STNIAETSITIDDIVFVIDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGR 771
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 312 QYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSS 371
Q + + ML + + V+ +++ +LL HI + PGAILVFLPGW+ I +L + + ++
Sbjct: 621 QKTRNAMAMLSESD---VSFELLEALLMHIKSKNIPGAILVFLPGWNLIFALMKFLQNTN 677
Query: 372 FFNSCLLYE 380
F Y+
Sbjct: 678 IFGDTSQYQ 686
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 5/51 (9%)
Query: 39 RKLQSRR-----YQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
R L+ RR Y++ LE R+KLP MR +L + +N + +I G TG G
Sbjct: 362 RSLRDRRQNDNEYRQFLEFREKLPIAAMRSEILTAINDNPVVIIRGNTGCG 412
>gi|157382856|gb|ABV48863.1| maleless [Drosophila melanogaster]
Length = 1293
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 57/116 (49%), Positives = 81/116 (69%), Gaps = 1/116 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFLPGW+ I +L + + ++ F ++S++QI+P HS +P Q+ +F PEGV KI+L
Sbjct: 656 ILVFLPGWNLIFALMKFLQNTNIFGDTSQYQILPCHSQIPRDEQRKVFEPVPEGVTKIIL 715
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+TNIAETSITIDDIV+V+D K +M F +N+ + W S N +QR+GRAGR
Sbjct: 716 STNIAETSITIDDIVFVIDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGR 771
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 4/54 (7%)
Query: 331 NDVIFSLLQ----HICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNSCLLYE 380
+DV F LL+ HI + PGAILVFLPGW+ I +L + + ++ F Y+
Sbjct: 633 SDVSFELLEALLLHIKSKNIPGAILVFLPGWNLIFALMKFLQNTNIFGDTSQYQ 686
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 5/51 (9%)
Query: 39 RKLQSRR-----YQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
R L+ RR Y++ LE R+KLP MR +L + +N + +I G TG G
Sbjct: 362 RSLRDRRQNDNEYRQFLEFREKLPIAAMRSEILTAINDNPVVIIRGNTGCG 412
>gi|395831759|ref|XP_003788959.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2 [Otolemur
garnettii]
Length = 1436
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 80/118 (67%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLH-RSMCQSSFF--NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
IL+FLPG+D I L R + F N+ R+Q+ LHS + T QK + PP GVRKI
Sbjct: 631 ILIFLPGYDEIVGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKI 690
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+L+TNIAETSIT++D+V+V+D GK K +FD + + LK WIS A+A QR+GRAGR
Sbjct: 691 ILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGR 748
>gi|327262695|ref|XP_003216159.1| PREDICTED: putative ATP-dependent RNA helicase DHX57-like [Anolis
carolinensis]
Length = 1305
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 81/118 (68%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN---SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
+LVFLPG I +L++ + ++ FN S R + PLHS L + Q+++F PP GV KI
Sbjct: 768 VLVFLPGLAEIKALYKQLQSNALFNNRHSRRCVVYPLHSSLSSAEQQAVFLKPPAGVVKI 827
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+++TNIAETSITIDD+VYV+D GK K +D + +L+ ++S ANA QR+GRAGR
Sbjct: 828 IISTNIAETSITIDDVVYVIDSGKMKEKRYDPSKGMESLEDMFVSKANALQRKGRAGR 885
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 51/101 (50%), Gaps = 21/101 (20%)
Query: 35 KEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHLDFITL 94
K+ K SR YQ +L+ R+KLP+++ R+ +L ++ +Q+ V+SG TG G
Sbjct: 443 KQFSIKKSSRHYQALLQERQKLPAWEKRETILRLLNKHQVLVVSGMTGCG---------- 492
Query: 95 KRSETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQR 135
+T Q P +L D LEG ++ L ICT R
Sbjct: 493 ---KTTQIPQFIL----DSSLEGPSSQ----LANIICTQPR 522
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 43/71 (60%), Gaps = 8/71 (11%)
Query: 317 VLNMLKDPELEGVNNDVIFSLLQHICTTQR---PGAILVFLPGWDTINSLHRSMCQSSFF 373
VL + +L+ VN ++I +LL+ I + + PGA+LVFLPG I +L++ + ++ F
Sbjct: 732 VLKTMATMDLDKVNLELIEALLEWIVSGKHSYPPGAVLVFLPGLAEIKALYKQLQSNALF 791
Query: 374 NS-----CLLY 379
N+ C++Y
Sbjct: 792 NNRHSRRCVVY 802
>gi|157382866|gb|ABV48868.1| maleless [Drosophila melanogaster]
Length = 1293
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 57/116 (49%), Positives = 81/116 (69%), Gaps = 1/116 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFLPGW+ I +L + + ++ F ++S++QI+P HS +P Q+ +F PEGV KI+L
Sbjct: 656 ILVFLPGWNLIFALMKFLQNTNIFGDTSQYQILPCHSQIPRDEQRKVFEPVPEGVTKIIL 715
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+TNIAETSITIDDIV+V+D K +M F +N+ + W S N +QR+GRAGR
Sbjct: 716 STNIAETSITIDDIVFVIDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGR 771
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 312 QYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSS 371
Q + + ML + + V+ +++ +LL HI + PGAILVFLPGW+ I +L + + ++
Sbjct: 621 QKTRNAMAMLSESD---VSFELLEALLMHIKSKNIPGAILVFLPGWNLIFALMKFLQNTN 677
Query: 372 FFNSCLLYE 380
F Y+
Sbjct: 678 IFGDTSQYQ 686
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 5/51 (9%)
Query: 39 RKLQSRR-----YQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
R L+ RR Y++ LE R+KLP MR +L + +N + +I G TG G
Sbjct: 362 RSLRDRRQNDNEYRQFLEFREKLPIAAMRSEILTAINDNPVVIIRGNTGCG 412
>gi|157382858|gb|ABV48864.1| maleless [Drosophila melanogaster]
Length = 1286
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 57/116 (49%), Positives = 81/116 (69%), Gaps = 1/116 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFLPGW+ I +L + + ++ F ++S++QI+P HS +P Q+ +F PEGV KI+L
Sbjct: 656 ILVFLPGWNLIFALMKFLQNTNIFGDTSQYQILPCHSQIPRDEQRKVFEPVPEGVTKIIL 715
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+TNIAETSITIDDIV+V+D K +M F +N+ + W S N +QR+GRAGR
Sbjct: 716 STNIAETSITIDDIVFVIDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGR 771
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 312 QYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSS 371
Q + + ML + + V+ +++ +LL HI + PGAILVFLPGW+ I +L + + ++
Sbjct: 621 QKTRNAMAMLSESD---VSFELLEALLMHIKSKNIPGAILVFLPGWNLIFALMKFLQNTN 677
Query: 372 FFNSCLLYE 380
F Y+
Sbjct: 678 IFGDTSQYQ 686
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 5/51 (9%)
Query: 39 RKLQSRR-----YQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
R L+ RR Y++ LE R+KLP MR +L + +N + +I G TG G
Sbjct: 362 RSLRDRRQNDNEYRQFLEFREKLPIAAMRSEILTAINDNPVVIIRGNTGCG 412
>gi|511891765|ref|XP_004765572.1| PREDICTED: putative ATP-dependent RNA helicase DHX57 isoform X1
[Mustela putorius furo]
Length = 1412
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 59/118 (50%), Positives = 79/118 (66%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN---SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVFLPG I L+ + +S FN S R + PLHS L + Q+++F PP GV KI
Sbjct: 876 ILVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVVHPLHSSLSSEEQQAVFVKPPAGVTKI 935
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+++TNIAETSITIDD+VYV+D GK K +D + +L+ ++S ANA QR+GRAGR
Sbjct: 936 IISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGR 993
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 36/55 (65%)
Query: 30 DAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+A K+ K SR++Q +L+ R+ LP+++ R+ +L ++ +Q+ VISG TG G
Sbjct: 544 NAKICKQFRIKQASRQFQSILQERQSLPAWEERETILKLLSEHQVLVISGMTGCG 598
>gi|426223789|ref|XP_004006056.1| PREDICTED: putative ATP-dependent RNA helicase DHX57 [Ovis aries]
Length = 1382
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 80/118 (67%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN---SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVFLPG I L+ + +S FN S+R I PLHS L + Q+++F PP GV KI
Sbjct: 845 ILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLHSSLSSEEQQAVFVKPPMGVTKI 904
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+++TNIAETSITIDD+VYV+D GK K +D + +L+ ++S ANA QR+GRAGR
Sbjct: 905 IISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGR 962
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 32/45 (71%)
Query: 40 KLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
K SR++Q +L+ R+ LP+++ R+ +L M+ +Q+ VISG TG G
Sbjct: 523 KQASRQFQSVLQERQSLPAWEERENILKMLSKHQVLVISGMTGCG 567
Score = 39.7 bits (91), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 311 QQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQR---PGAILVFLPGWDTINSLHRSM 367
Q V+ + + E VN ++I +LL+ I + PGAILVFLPG I L+ +
Sbjct: 803 QGVSKSVIKTMSIMDFEKVNLELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQL 862
Query: 368 CQSSFFNS 375
+S FN+
Sbjct: 863 QSNSLFNN 870
>gi|157382872|gb|ABV48871.1| maleless [Drosophila melanogaster]
Length = 1293
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 57/116 (49%), Positives = 81/116 (69%), Gaps = 1/116 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFLPGW+ I +L + + ++ F ++S++QI+P HS +P Q+ +F PEGV KI+L
Sbjct: 656 ILVFLPGWNLIFALMKFLQNTNIFGDTSQYQILPCHSQIPRDEQRKVFEPVPEGVTKIIL 715
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+TNIAETSITIDDIV+V+D K +M F +N+ + W S N +QR+GRAGR
Sbjct: 716 STNIAETSITIDDIVFVIDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGR 771
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 312 QYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSS 371
Q + + ML + + V+ +++ +LL HI + PGAILVFLPGW+ I +L + + ++
Sbjct: 621 QKTRNAMAMLSESD---VSFELLEALLMHIKSKNIPGAILVFLPGWNLIFALMKFLQNTN 677
Query: 372 FFNSCLLYE 380
F Y+
Sbjct: 678 IFGDTSQYQ 686
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 5/51 (9%)
Query: 39 RKLQSRR-----YQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
R L+ RR Y++ LE R+KLP MR +L + +N + +I G TG G
Sbjct: 362 RSLRDRRQNDNEYRQFLEFREKLPIAAMRSEILTAINDNPVVIIRGNTGCG 412
>gi|157382862|gb|ABV48866.1| maleless [Drosophila melanogaster]
Length = 1293
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 57/116 (49%), Positives = 81/116 (69%), Gaps = 1/116 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFLPGW+ I +L + + ++ F ++S++QI+P HS +P Q+ +F PEGV KI+L
Sbjct: 656 ILVFLPGWNLIFALMKFLQNTNIFGDTSQYQILPCHSQIPRDEQRKVFEPVPEGVTKIIL 715
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+TNIAETSITIDDIV+V+D K +M F +N+ + W S N +QR+GRAGR
Sbjct: 716 STNIAETSITIDDIVFVIDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGR 771
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 312 QYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSS 371
Q + + ML + + V+ +++ +LL HI + PGAILVFLPGW+ I +L + + ++
Sbjct: 621 QKTRNAMAMLSESD---VSFELLEALLMHIKSKNIPGAILVFLPGWNLIFALMKFLQNTN 677
Query: 372 FFNSCLLYE 380
F Y+
Sbjct: 678 IFGDTSQYQ 686
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 5/51 (9%)
Query: 39 RKLQSRR-----YQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
R L+ RR Y++ LE R+KLP MR +L + +N + +I G TG G
Sbjct: 362 RSLRDRRQNDNEYRQFLEFREKLPIAAMRSEILTAINDNPVVIIRGNTGCG 412
>gi|157382854|gb|ABV48862.1| maleless [Drosophila melanogaster]
Length = 1293
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 57/116 (49%), Positives = 81/116 (69%), Gaps = 1/116 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFLPGW+ I +L + + ++ F ++S++QI+P HS +P Q+ +F PEGV KI+L
Sbjct: 656 ILVFLPGWNLIFALMKFLQNTNIFGDTSQYQILPCHSQIPRDEQRKVFEPVPEGVTKIIL 715
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+TNIAETSITIDDIV+V+D K +M F +N+ + W S N +QR+GRAGR
Sbjct: 716 STNIAETSITIDDIVFVIDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGR 771
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 312 QYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSS 371
Q + + ML + + V+ +++ +LL HI + PGAILVFLPGW+ I +L + + ++
Sbjct: 621 QKTRNAMAMLSESD---VSFELLEALLMHIKSKNIPGAILVFLPGWNLIFALMKFLQNTN 677
Query: 372 FFNSCLLYE 380
F Y+
Sbjct: 678 IFGDTSQYQ 686
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 5/51 (9%)
Query: 39 RKLQSRR-----YQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
R L+ RR Y++ LE R+KLP MR +L + +N + +I G TG G
Sbjct: 362 RSLRDRRQNDNEYRQFLEFREKLPIAAMRSEILTAINDNPVVIIRGNTGCG 412
>gi|157824892|gb|ABV82525.1| maleless [Drosophila melanogaster]
Length = 1293
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 57/116 (49%), Positives = 81/116 (69%), Gaps = 1/116 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFLPGW+ I +L + + ++ F ++S++QI+P HS +P Q+ +F PEGV KI+L
Sbjct: 656 ILVFLPGWNLIFALMKFLQNTNIFGDTSQYQILPCHSQIPRDEQRKVFEPVPEGVTKIIL 715
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+TNIAETSITIDDIV+V+D K +M F +N+ + W S N +QR+GRAGR
Sbjct: 716 STNIAETSITIDDIVFVIDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGR 771
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 312 QYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSS 371
Q + + ML + + V+ +++ +LL HI + PGAILVFLPGW+ I +L + + ++
Sbjct: 621 QKTRNAMAMLSESD---VSFELLEALLMHIKSKNIPGAILVFLPGWNLIFALMKFLQNTN 677
Query: 372 FFNSCLLYE 380
F Y+
Sbjct: 678 IFGDTSQYQ 686
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 5/51 (9%)
Query: 39 RKLQSRR-----YQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
R L+ RR Y++ LE R+KLP MR +L + +N + +I G TG G
Sbjct: 362 RSLRDRRQNDNEYRQFLEFREKLPIAAMRSEILTAINDNPVVIIRGNTGCG 412
>gi|157382874|gb|ABV48872.1| maleless [Drosophila melanogaster]
Length = 1293
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 57/116 (49%), Positives = 81/116 (69%), Gaps = 1/116 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFLPGW+ I +L + + ++ F ++S++QI+P HS +P Q+ +F PEGV KI+L
Sbjct: 656 ILVFLPGWNLIFALMKFLQNTNIFGDTSQYQILPCHSQIPRDEQRKVFEPVPEGVTKIIL 715
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+TNIAETSITIDDIV+V+D K +M F +N+ + W S N +QR+GRAGR
Sbjct: 716 STNIAETSITIDDIVFVIDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGR 771
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 312 QYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSS 371
Q + + ML + + V+ +++ +LL HI + PGAILVFLPGW+ I +L + + ++
Sbjct: 621 QKTRNAMAMLSESD---VSFELLEALLMHIKSKNIPGAILVFLPGWNLIFALMKFLQNTN 677
Query: 372 FFNSCLLYE 380
F Y+
Sbjct: 678 IFGDTSQYQ 686
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 5/51 (9%)
Query: 39 RKLQSRR-----YQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
R L+ RR Y++ LE R+KLP MR +L + +N + +I G TG G
Sbjct: 362 RSLRDRRQNDNEYRQFLEFREKLPIAAMRSEILTAINDNPVVIIRGNTGCG 412
>gi|432114676|gb|ELK36515.1| Putative ATP-dependent RNA helicase YTHDC2 [Myotis davidii]
Length = 1365
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 80/118 (67%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLH-RSMCQSSFF--NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
IL+FLPG+D I L R + F N+ R+Q+ LHS + T QK + PP GVRKI
Sbjct: 562 ILIFLPGYDEIVGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKI 621
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+L+TNIAETSIT++D+V+V+D GK K +FD + + LK WIS A+A QR+GRAGR
Sbjct: 622 ILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGR 679
>gi|157824886|gb|ABV82522.1| maleless [Drosophila melanogaster]
Length = 1293
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 57/116 (49%), Positives = 81/116 (69%), Gaps = 1/116 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFLPGW+ I +L + + ++ F ++S++QI+P HS +P Q+ +F PEGV KI+L
Sbjct: 656 ILVFLPGWNLIFALMKFLQNTNIFGDTSQYQILPCHSQIPRDEQRKVFEPVPEGVTKIIL 715
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+TNIAETSITIDDIV+V+D K +M F +N+ + W S N +QR+GRAGR
Sbjct: 716 STNIAETSITIDDIVFVIDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGR 771
Score = 43.5 bits (101), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 312 QYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSS 371
Q + + ML + + V+ +++ +LL HI + PGAILVFLPGW+ I +L + + ++
Sbjct: 621 QKTRNAMAMLSESD---VSFELLEALLMHIKSKNIPGAILVFLPGWNLIFALMKFLQNTN 677
Query: 372 FFNSCLLYE 380
F Y+
Sbjct: 678 IFGDTSQYQ 686
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 5/51 (9%)
Query: 39 RKLQSRR-----YQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
R L+ RR Y++ LE R+KLP MR +L + +N + +I G TG G
Sbjct: 362 RSLRDRRQNDNEYRQFLEFREKLPIAAMRSEILTAINDNPVVIIRGNTGCG 412
>gi|149727630|ref|XP_001500458.1| PREDICTED: putative ATP-dependent RNA helicase DHX57 isoform 1
[Equus caballus]
Length = 1383
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 80/118 (67%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN---SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVFLPG I L+ + +S FN S+R I PLHS L + Q+++F PP GV KI
Sbjct: 847 ILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLHSSLSSEEQQAVFVKPPVGVTKI 906
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+++TNIAETSITIDD+VYV+D GK K +D + +L+ ++S ANA QR+GRAGR
Sbjct: 907 IISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGR 964
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 36/55 (65%)
Query: 30 DAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+A K+ K SR++Q +L+ R+ LP+++ R+ +L ++ +Q+ VISG TG G
Sbjct: 515 NAKICKQFRIKQASRQFQSILQERQSLPAWEERETILKLLSQHQVLVISGMTGCG 569
>gi|157382880|gb|ABV48875.1| maleless [Drosophila melanogaster]
Length = 1293
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 57/116 (49%), Positives = 81/116 (69%), Gaps = 1/116 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFLPGW+ I +L + + ++ F ++S++QI+P HS +P Q+ +F PEGV KI+L
Sbjct: 656 ILVFLPGWNLIFALMKFLQNTNIFGDTSQYQILPCHSQIPRDEQRKVFEPVPEGVTKIIL 715
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+TNIAETSITIDDIV+V+D K +M F +N+ + W S N +QR+GRAGR
Sbjct: 716 STNIAETSITIDDIVFVIDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGR 771
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 312 QYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSS 371
Q + + ML + + V+ +++ +LL HI + PGAILVFLPGW+ I +L + + ++
Sbjct: 621 QKTRNAMAMLSESD---VSFELLEALLMHIKSKNIPGAILVFLPGWNLIFALMKFLQNTN 677
Query: 372 FFNSCLLYE 380
F Y+
Sbjct: 678 IFGDTSQYQ 686
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 5/51 (9%)
Query: 39 RKLQSRR-----YQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
R L+ RR Y++ LE R+KLP MR +L + +N + +I G TG G
Sbjct: 362 RSLRDRRQNDNEYRQFLEFREKLPIAAMRSEILTAINDNPVVIIRGNTGCG 412
>gi|521026144|gb|EPQ07932.1| Putative ATP-dependent RNA helicase YTHDC2 [Myotis brandtii]
Length = 1365
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 80/118 (67%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLH-RSMCQSSFF--NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
IL+FLPG+D I L R + F N+ R+Q+ LHS + T QK + PP GVRKI
Sbjct: 562 ILIFLPGYDEIVGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKI 621
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+L+TNIAETSIT++D+V+V+D GK K +FD + + LK WIS A+A QR+GRAGR
Sbjct: 622 ILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGR 679
>gi|157824884|gb|ABV82521.1| maleless [Drosophila melanogaster]
Length = 1293
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 57/116 (49%), Positives = 81/116 (69%), Gaps = 1/116 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFLPGW+ I +L + + ++ F ++S++QI+P HS +P Q+ +F PEGV KI+L
Sbjct: 656 ILVFLPGWNLIFALMKFLQNTNIFGDTSQYQILPCHSQIPRDEQRKVFEPVPEGVTKIIL 715
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+TNIAETSITIDDIV+V+D K +M F +N+ + W S N +QR+GRAGR
Sbjct: 716 STNIAETSITIDDIVFVIDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGR 771
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 312 QYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSS 371
Q + + ML + + V+ +++ +LL HI + PGAILVFLPGW+ I +L + + ++
Sbjct: 621 QKTRNAMAMLSESD---VSFELLEALLMHIKSKNIPGAILVFLPGWNLIFALMKFLQNTN 677
Query: 372 FFNSCLLYE 380
F Y+
Sbjct: 678 IFGDTSQYQ 686
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 5/51 (9%)
Query: 39 RKLQSRR-----YQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
R L+ RR Y++ LE R+KLP MR +L + +N + +I G TG G
Sbjct: 362 RSLRDRRQNDNEYRQFLEFREKLPIAAMRSEILTAINDNPVVIIRGNTGCG 412
>gi|511989909|ref|XP_004812669.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2 isoform X1
[Mustela putorius furo]
Length = 1429
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 80/118 (67%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLH-RSMCQSSFF--NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
IL+FLPG+D I L R + F N+ R+Q+ LHS + T QK + PP GVRKI
Sbjct: 624 ILIFLPGYDEIVGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKI 683
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+L+TNIAETSIT++D+V+V+D GK K +FD + + LK WIS A+A QR+GRAGR
Sbjct: 684 ILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGR 741
>gi|354490378|ref|XP_003507335.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
YTHDC2-like [Cricetulus griseus]
Length = 1433
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 80/118 (67%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLH-RSMCQSSFF--NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
IL+FLPG+D I L R + F N+ R+Q+ LHS + T QK + PP GVRKI
Sbjct: 628 ILIFLPGYDEIVGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKI 687
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+L+TNIAETSIT++D+V+V+D GK K +FD + + LK WIS A+A QR+GRAGR
Sbjct: 688 ILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGR 745
>gi|409051570|gb|EKM61046.1| hypothetical protein PHACADRAFT_247373 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1355
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 59/121 (48%), Positives = 79/121 (65%), Gaps = 6/121 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSF------FNSSRFQIIPLHSMLPTVSQKSIFNTPPEGV 242
+LVFLPGWD I + R++ FNSS+F+I LHS +P Q+ IF+ PP G
Sbjct: 731 VLVFLPGWDDIIGVQRALQNPRGGRLGLNFNSSQFRIHCLHSTVPIQEQQLIFDPPPPGQ 790
Query: 243 RKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAG 302
R+I+LATNIAETS+TI D+VYVVD K K +D + +I++L W+ +N QR GRAG
Sbjct: 791 RRIILATNIAETSVTIPDVVYVVDSAKIKEQRYDPERHISSLVSAWVGSSNLNQRAGRAG 850
Query: 303 R 303
R
Sbjct: 851 R 851
>gi|157824890|gb|ABV82524.1| maleless [Drosophila melanogaster]
Length = 1293
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 57/116 (49%), Positives = 81/116 (69%), Gaps = 1/116 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFLPGW+ I +L + + ++ F ++S++QI+P HS +P Q+ +F PEGV KI+L
Sbjct: 656 ILVFLPGWNLIFALMKFLQNTNIFGDTSQYQILPCHSQIPRDEQRKVFEPVPEGVTKIIL 715
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+TNIAETSITIDDIV+V+D K +M F +N+ + W S N +QR+GRAGR
Sbjct: 716 STNIAETSITIDDIVFVIDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGR 771
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 312 QYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSS 371
Q + + ML + + V+ +++ +LL HI + PGAILVFLPGW+ I +L + + ++
Sbjct: 621 QKTRNAMAMLSESD---VSFELLEALLMHIKSKNIPGAILVFLPGWNLIFALMKFLQNTN 677
Query: 372 FFNSCLLYE 380
F Y+
Sbjct: 678 IFGDTSQYQ 686
>gi|505838505|ref|XP_004612786.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2 [Sorex
araneus]
Length = 1426
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 80/118 (67%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLH-RSMCQSSFF--NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
IL+FLPG+D I L R + F N+ R+Q+ LHS + T QK + PP GVRKI
Sbjct: 621 ILIFLPGYDEIVGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKI 680
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+L+TNIAETSIT++D+V+V+D GK K +FD + + LK WIS A+A QR+GRAGR
Sbjct: 681 ILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGR 738
>gi|244793002|ref|NP_001156485.1| probable ATP-dependent RNA helicase YTHDC2 [Mus musculus]
gi|239983830|sp|B2RR83.1|YTDC2_MOUSE RecName: Full=Probable ATP-dependent RNA helicase YTHDC2
gi|187957072|gb|AAI38264.1| YTH domain containing 2 [Mus musculus]
gi|219520864|gb|AAI71951.1| Ythdc2 protein [Mus musculus]
Length = 1445
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 80/118 (67%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLH-RSMCQSSFF--NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
IL+FLPG+D I L R + F N+ R+Q+ LHS + T QK + PP GVRKI
Sbjct: 640 ILIFLPGYDEIVGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKI 699
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+L+TNIAETSIT++D+V+V+D GK K +FD + + LK WIS A+A QR+GRAGR
Sbjct: 700 ILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGR 757
>gi|380020062|ref|XP_003693917.1| PREDICTED: LOW QUALITY PROTEIN: dosage compensation regulator-like
[Apis florea]
Length = 1239
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 56/115 (48%), Positives = 75/115 (65%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL+FLPGW+ I +L + + Q + + IIPLHS LP Q+ +F+ P G+ KI+LA
Sbjct: 650 ILIFLPGWNLIFALMKHLQQHPVYGGLSYVIIPLHSQLPREDQRKVFDPVPSGITKIILA 709
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+D+VYV+D K KM F +N+ W S N +QR+GRAGR
Sbjct: 710 TNIAETSITINDVVYVIDSCKAKMKLFTSHNNMTNYATVWASKTNLEQRKGRAGR 764
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 16/101 (15%)
Query: 288 WISLANAKQRRGRAGRTLKRSETQQYPNDVLNMLKDPEL-------------EGVNNDVI 334
+I ++K+R+ R L T+ P + LN + DPE + ++ ++I
Sbjct: 578 FIPPMDSKKRKNRDSDDLP---TEGEPEENLNKIIDPEYSIQTKNAMAQLSEKEISFELI 634
Query: 335 FSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
+LL++I PGAIL+FLPGW+ I +L + + Q +
Sbjct: 635 EALLKYINDQSIPGAILIFLPGWNLIFALMKHLQQHPVYGG 675
>gi|524930014|ref|XP_005069209.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2 [Mesocricetus
auratus]
Length = 1446
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 80/118 (67%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLH-RSMCQSSFF--NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
IL+FLPG+D I L R + F N+ R+Q+ LHS + T QK + PP GVRKI
Sbjct: 641 ILIFLPGYDEIVGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKI 700
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+L+TNIAETSIT++D+V+V+D GK K +FD + + LK WIS A+A QR+GRAGR
Sbjct: 701 ILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGR 758
>gi|412987793|emb|CCO19189.1| predicted protein [Bathycoccus prasinos]
Length = 1740
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 61/138 (44%), Positives = 82/138 (59%), Gaps = 24/138 (17%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSS-----------------------RFQIIPLHSM 225
ILVFLPG I +LH + ++S + S R+ ++PLHS
Sbjct: 1175 ILVFLPGMGEIKALHDRL-RASLYESEHRAPSSVRTEDDDDDDKKKNAPPRYLLVPLHST 1233
Query: 226 LPTVSQKSIFNTPPEGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLK 285
L QK F+ P GVRK+V++TNIAETSITIDD VYV+D GK + + F+ K ++L+
Sbjct: 1234 LTAEEQKRAFSKPAPGVRKVVMSTNIAETSITIDDCVYVIDAGKVRETRFNAKTRTSSLE 1293
Query: 286 PEWISLANAKQRRGRAGR 303
W+S A+AKQRRGRAGR
Sbjct: 1294 TAWVSRASAKQRRGRAGR 1311
Score = 42.4 bits (98), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 312 QYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSS 371
+Y + L+ + VN D+I L+ HI GAILVFLPG I +LH + ++S
Sbjct: 1137 EYDESTMRQLQIVDENCVNLDLIEQLVTHIAEDYEEGAILVFLPGMGEIKALHDRL-RAS 1195
Query: 372 FFNS 375
+ S
Sbjct: 1196 LYES 1199
Score = 39.3 bits (90), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 55/117 (47%), Gaps = 15/117 (12%)
Query: 15 TSWETRQKLLNDPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQI 74
++ E ++ D + A ++ + K S ++++M + R+ LP+ + R V+ V+ ++
Sbjct: 836 SAQEKAEREKRDREISNALHEKELAKRSSMKWKQMQKIRENLPARKARSEVISAVKRSRA 895
Query: 75 TVISGETGSGPPLHL-DFITLKRSETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHI 130
VISG TG G + FI Y N +L+ E G N +I + + I
Sbjct: 896 CVISGATGCGKTTQVPQFI---------YENAILD-----ERNGANTSIIITQPRRI 938
>gi|459180289|ref|XP_004226619.1| PREDICTED: ATP-dependent RNA helicase A-like [Ciona intestinalis]
Length = 897
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 76/115 (66%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPGW+ I SL + + Q F ++++PLHS +P Q +F+ P GV KI+L+
Sbjct: 667 VLVFLPGWNLIFSLMKHLEQHPMFGGPAYKLLPLHSQIPREDQHKVFDAAPPGVTKIILS 726
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+D+V+V+D K KM F +N+ W S +N +QR+GRAGR
Sbjct: 727 TNIAETSITINDVVFVIDSCKVKMKMFTSHNNMTNYATVWASQSNLEQRKGRAGR 781
>gi|126304534|ref|XP_001362686.1| PREDICTED: putative ATP-dependent RNA helicase DHX57 [Monodelphis
domestica]
Length = 1363
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 82/118 (69%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLH-RSMCQSSFFN--SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
+LVFLPG I L+ R C ++F N +R I+PLHS L + Q++IF PPEGV KI
Sbjct: 826 VLVFLPGLAEIKMLYERLQCNATFNNRRGNRCIILPLHSSLTSEEQQAIFVKPPEGVTKI 885
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+++TNIAETSITI+D+VYV+D GK K +D + +L+ ++S ANA QR+GRAGR
Sbjct: 886 IISTNIAETSITINDVVYVIDSGKMKEKRYDASKGMESLEDTFVSRANALQRKGRAGR 943
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 38/55 (69%)
Query: 30 DAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+A K++ K SR+YQ +L+ R+ LP+++ R+ +LD++ +Q+ V+SG TG G
Sbjct: 496 NAKICKQIQIKKASRQYQSILQERRSLPAWEERETILDLLSKHQVLVVSGMTGCG 550
>gi|511878312|ref|XP_004759111.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2 isoform X1
[Mustela putorius furo]
Length = 1385
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 80/118 (67%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLH-RSMCQSSFF--NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
IL+FLPG+D I L R + F N+ R+Q+ LHS + T QK + PP GVRKI
Sbjct: 580 ILIFLPGYDEIVGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKI 639
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+L+TNIAETSIT++D+V+V+D GK K +FD + + LK WIS A+A QR+GRAGR
Sbjct: 640 ILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGR 697
>gi|344265985|ref|XP_003405061.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like
[Loxodonta africana]
Length = 1437
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 80/118 (67%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLH-RSMCQSSFF--NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
IL+FLPG+D I L R + F N+ R+Q+ LHS + T QK + PP GVRKI
Sbjct: 632 ILIFLPGYDEIVGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKI 691
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+L+TNIAETSIT++D+V+V+D GK K +FD + + LK WIS A+A QR+GRAGR
Sbjct: 692 ILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGR 749
>gi|511990197|ref|XP_004812805.1| PREDICTED: putative ATP-dependent RNA helicase DHX57 isoform X1
[Mustela putorius furo]
Length = 1415
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 59/118 (50%), Positives = 79/118 (66%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN---SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVFLPG I L+ + +S FN S R + PLHS L + Q+++F PP GV KI
Sbjct: 879 ILVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVVHPLHSSLSSEEQQAVFVKPPAGVTKI 938
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+++TNIAETSITIDD+VYV+D GK K +D + +L+ ++S ANA QR+GRAGR
Sbjct: 939 IISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGR 996
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 36/55 (65%)
Query: 30 DAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+A K+ K SR++Q +L+ R+ LP+++ R+ +L ++ +Q+ VISG TG G
Sbjct: 547 NAKICKQFRIKQASRQFQSILQERQSLPAWEERETILKLLSEHQVLVISGMTGCG 601
>gi|511891769|ref|XP_004765574.1| PREDICTED: putative ATP-dependent RNA helicase DHX57 isoform X3
[Mustela putorius furo]
gi|511891771|ref|XP_004765575.1| PREDICTED: putative ATP-dependent RNA helicase DHX57 isoform X4
[Mustela putorius furo]
gi|511891773|ref|XP_004765576.1| PREDICTED: putative ATP-dependent RNA helicase DHX57 isoform X5
[Mustela putorius furo]
gi|511891775|ref|XP_004765577.1| PREDICTED: putative ATP-dependent RNA helicase DHX57 isoform X6
[Mustela putorius furo]
gi|511990201|ref|XP_004812807.1| PREDICTED: putative ATP-dependent RNA helicase DHX57 isoform X3
[Mustela putorius furo]
gi|511990203|ref|XP_004812808.1| PREDICTED: putative ATP-dependent RNA helicase DHX57 isoform X4
[Mustela putorius furo]
gi|511990205|ref|XP_004812809.1| PREDICTED: putative ATP-dependent RNA helicase DHX57 isoform X5
[Mustela putorius furo]
gi|511990207|ref|XP_004812810.1| PREDICTED: putative ATP-dependent RNA helicase DHX57 isoform X6
[Mustela putorius furo]
Length = 1383
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 59/118 (50%), Positives = 79/118 (66%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN---SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVFLPG I L+ + +S FN S R + PLHS L + Q+++F PP GV KI
Sbjct: 847 ILVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVVHPLHSSLSSEEQQAVFVKPPAGVTKI 906
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+++TNIAETSITIDD+VYV+D GK K +D + +L+ ++S ANA QR+GRAGR
Sbjct: 907 IISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGR 964
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 36/55 (65%)
Query: 30 DAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+A K+ K SR++Q +L+ R+ LP+++ R+ +L ++ +Q+ VISG TG G
Sbjct: 515 NAKICKQFRIKQASRQFQSILQERQSLPAWEERETILKLLSEHQVLVISGMTGCG 569
>gi|224049015|ref|XP_002189096.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like, partial
[Taeniopygia guttata]
Length = 1074
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 59/118 (50%), Positives = 81/118 (68%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLH-RSMCQSSFF--NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
IL+FLPG+D I SL R + F N+ R+Q+ LHS + T+ QK + +PP G+RKI
Sbjct: 343 ILIFLPGYDEIVSLRDRIVFDDKRFTDNAHRYQVFMLHSSMQTLYQKKVLESPPFGIRKI 402
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+L+TNIAETSIT+ D+V+V+D GK K +FD + +K WIS A+A QR+GRAGR
Sbjct: 403 ILSTNIAETSITVSDVVFVIDSGKVKEKSFDAPSRVTMVKMGWISKASAIQRKGRAGR 460
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 25/37 (67%)
Query: 327 EGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSL 363
E V+ D+I LL IC + GAIL+FLPG+D I SL
Sbjct: 320 EKVDLDLIMHLLHSICHSSDAGAILIFLPGYDEIVSL 356
>gi|126320676|ref|XP_001370066.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2 [Monodelphis
domestica]
Length = 1447
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 59/118 (50%), Positives = 80/118 (67%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLH-RSMCQSSFF--NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
IL+FLPG+D I L R + F N+ R+Q+ LHS + T QK + PP G+RKI
Sbjct: 642 ILIFLPGYDEIVGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVLKNPPSGIRKI 701
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+L+TNIAETSIT++D+V+V+D GK K +FD + + LK WIS A+A QR+GRAGR
Sbjct: 702 ILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNYVTMLKMVWISKASAIQRKGRAGR 759
>gi|478491991|ref|XP_004420361.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2
[Ceratotherium simum simum]
Length = 1432
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 80/118 (67%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLH-RSMCQSSFF--NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
IL+FLPG+D I L R + F N+ R+Q+ LHS + T QK + PP GVRKI
Sbjct: 627 ILIFLPGYDEIVGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKI 686
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+L+TNIAETSIT++D+V+V+D GK K +FD + + LK WIS A+A QR+GRAGR
Sbjct: 687 ILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGR 744
>gi|392344596|ref|XP_003749024.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
YTHDC2 [Rattus norvegicus]
Length = 1430
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 80/118 (67%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLH-RSMCQSSFF--NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
IL+FLPG+D I L R + F N+ R+Q+ LHS + T QK + PP GVRKI
Sbjct: 625 ILIFLPGYDEIVGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKI 684
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+L+TNIAETSIT++D+V+V+D GK K +FD + + LK WIS A+A QR+GRAGR
Sbjct: 685 ILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGR 742
>gi|432913230|ref|XP_004078970.1| PREDICTED: ATP-dependent RNA helicase A-like [Oryzias latipes]
Length = 1224
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 79/115 (68%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPGW+ I S+ R + + F S+R++I+PLHS +P Q+ +F+ P+ V K++L+
Sbjct: 664 VLVFLPGWNLIFSMQRHLETNPHFGSNRYRILPLHSQVPREEQRRVFDPVPDDVTKVILS 723
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+D+VYV+D K K+ F +N+ W S N +QR+GRAGR
Sbjct: 724 TNIAETSITINDVVYVIDSCKQKVKLFTSHNNMTNYATVWASKTNLEQRKGRAGR 778
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 30/44 (68%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
+++ +LL++I T + GA+LVFLPGW+ I S+ R + + F S
Sbjct: 646 ELVEALLKYIETLKVSGAVLVFLPGWNLIFSMQRHLETNPHFGS 689
>gi|410948040|ref|XP_003980749.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2 [Felis catus]
Length = 1411
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 80/118 (67%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLH-RSMCQSSFF--NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
IL+FLPG+D I L R + F N+ R+Q+ LHS + T QK + PP GVRKI
Sbjct: 606 ILIFLPGYDEIVGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKI 665
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+L+TNIAETSIT++D+V+V+D GK K +FD + + LK WIS A+A QR+GRAGR
Sbjct: 666 ILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGR 723
>gi|332227254|ref|XP_003262808.1| PREDICTED: putative ATP-dependent RNA helicase DHX57 [Nomascus
leucogenys]
Length = 1387
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 80/118 (67%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN---SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVFLPG I L+ + +S FN S+R I PLHS L + Q+++F PP GV KI
Sbjct: 851 ILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLHSSLSSEEQQAVFVKPPVGVTKI 910
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+++TNIAETSITIDD+VYV+D GK K +D + +L+ ++S ANA QR+GRAGR
Sbjct: 911 IISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGR 968
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 36/50 (72%)
Query: 35 KEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
K+ K SR++Q +L+ R+ LP+++ R+ +L+++R +Q+ VISG TG G
Sbjct: 524 KQFRMKQASRQFQSILQERQSLPAWEERETILNLLRKHQVVVISGMTGCG 573
>gi|281353451|gb|EFB29035.1| hypothetical protein PANDA_013369 [Ailuropoda melanoleuca]
Length = 1342
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 80/118 (67%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLH-RSMCQSSFF--NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
IL+FLPG+D I L R + F N+ R+Q+ LHS + T QK + PP GVRKI
Sbjct: 563 ILIFLPGYDEIVGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKI 622
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+L+TNIAETSIT++D+V+V+D GK K +FD + + LK WIS A+A QR+GRAGR
Sbjct: 623 ILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGR 680
>gi|488518718|ref|XP_004451308.1| PREDICTED: putative ATP-dependent RNA helicase DHX57 isoform 1
[Dasypus novemcinctus]
gi|488518720|ref|XP_004451309.1| PREDICTED: putative ATP-dependent RNA helicase DHX57 isoform 2
[Dasypus novemcinctus]
Length = 1383
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 79/118 (66%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN---SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVFLPG I L+ + +S FN S R I PLHS L + Q+++F PP GV KI
Sbjct: 847 ILVFLPGLAEIKMLYEQLQSNSLFNNRRSKRCVIHPLHSSLSSEEQQAVFVKPPLGVTKI 906
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+++TNIAETSITIDD+VYV+D GK K +D + +L+ ++S ANA QR+GRAGR
Sbjct: 907 IISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGR 964
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 31/42 (73%)
Query: 43 SRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
SR++Q +L+ R+ LP+++ R+ +L ++ +Q+ VISG TG G
Sbjct: 528 SRQFQSILQERQSLPAWEERETILKLLSKHQVLVISGMTGCG 569
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 308 SETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICT---TQRPGAILVFLPGWDTINSLH 364
S + + V+ + + E VN ++I +LL+ I T PGAILVFLPG I L+
Sbjct: 802 SRYKGFSKSVIKTMSIMDFEKVNLELIEALLEWIVDGKHTYPPGAILVFLPGLAEIKMLY 861
Query: 365 RSMCQSSFFNS 375
+ +S FN+
Sbjct: 862 EQLQSNSLFNN 872
>gi|297667787|ref|XP_002812147.1| PREDICTED: putative ATP-dependent RNA helicase DHX57 [Pongo abelii]
Length = 1387
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 80/118 (67%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN---SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVFLPG I L+ + +S FN S+R I PLHS L + Q+++F PP GV KI
Sbjct: 851 ILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLHSSLSSEEQQAVFVKPPVGVTKI 910
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+++TNIAETSITIDD+VYV+D GK K +D + +L+ ++S ANA QR+GRAGR
Sbjct: 911 IISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGR 968
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 36/50 (72%)
Query: 35 KEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
K+ K SR++Q +L+ R+ LP+++ R+ +L+++R +Q+ VISG TG G
Sbjct: 524 KQFRMKQASRQFQSILQERQSLPAWEERETILNLLRKHQVVVISGMTGCG 573
>gi|512940341|ref|XP_004909165.1| PREDICTED: putative ATP-dependent RNA helicase DHX57 isoform X3
[Heterocephalus glaber]
gi|512940343|ref|XP_004909166.1| PREDICTED: putative ATP-dependent RNA helicase DHX57 isoform X4
[Heterocephalus glaber]
gi|512940345|ref|XP_004909167.1| PREDICTED: putative ATP-dependent RNA helicase DHX57 isoform X5
[Heterocephalus glaber]
gi|512940347|ref|XP_004909168.1| PREDICTED: putative ATP-dependent RNA helicase DHX57 isoform X6
[Heterocephalus glaber]
gi|351715510|gb|EHB18429.1| Putative ATP-dependent RNA helicase DHX57 [Heterocephalus glaber]
Length = 1385
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 80/118 (67%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN---SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVFLPG I L+ + +S FN S+R I PLHS L + Q+++F PP GV KI
Sbjct: 849 ILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCIIHPLHSSLSSEEQQAVFIKPPVGVTKI 908
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+++TNIAETSITIDD+VYV+D GK K +D + +L+ ++S ANA QR+GRAGR
Sbjct: 909 IISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGR 966
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 32/45 (71%)
Query: 40 KLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
K SR++Q +L+ R+ LP+++ R+ +L ++ +Q+ VISG TG G
Sbjct: 527 KQASRQFQSVLQERQSLPAWEERETILKLLSKHQVVVISGMTGCG 571
>gi|195434018|ref|XP_002065000.1| GK15229 [Drosophila willistoni]
gi|194161085|gb|EDW75986.1| GK15229 [Drosophila willistoni]
Length = 931
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 56/120 (46%), Positives = 88/120 (73%), Gaps = 4/120 (3%)
Query: 189 ILVFLPGWDTINSLHRSM--CQSSFFNSSRFQII--PLHSMLPTVSQKSIFNTPPEGVRK 244
ILVF+P ++ I+ L + +S R Q+I PLHS++P+V Q++IF P+G RK
Sbjct: 416 ILVFMPSFERISQLFNLLEKPKSPKGEHWRDQLILHPLHSLMPSVEQQAIFRRVPQGKRK 475
Query: 245 IVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT 304
++++T IAETS+TIDD+VYV++ G+TK S++D++ NI L+ +W++LAN +QR+GRAGR
Sbjct: 476 VIISTIIAETSVTIDDVVYVINTGRTKTSSYDIESNIQMLEEDWVTLANTQQRKGRAGRV 535
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 312 QYPNDVLNMLKDPELEGVNN-DVIFSLLQHICTTQRPGAILVFLPGWDTINSL 363
+Y + VL+ L+ PE EG + I L+ +IC + GAILVF+P ++ I+ L
Sbjct: 377 KYDSRVLDALRLPESEGCECIEFIVDLIYYICERKPEGAILVFMPSFERISQL 429
Score = 39.3 bits (90), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Query: 24 LNDPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGS 83
+D LD E +++Q E +AR KLP+ +++ V+ NQ+ +I G TG
Sbjct: 115 FSDSRLDKKLLTEYEKRMQFNHRDERQKARLKLPTMAYSQHIIEAVKQNQVILIVGSTGC 174
Query: 84 G-----PPLHLDFITLKRS 97
G P + LD+ +R+
Sbjct: 175 GKTTQVPQILLDYEISQRT 193
>gi|471378480|ref|XP_004377042.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2 [Trichechus
manatus latirostris]
Length = 1436
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 80/118 (67%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLH-RSMCQSSFF--NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
+L+FLPG+D I L R + F N+ R+Q+ LHS + T QK I PP GVRKI
Sbjct: 631 VLIFLPGYDEIVGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKILKNPPAGVRKI 690
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+L+TNIAETSIT++D+V+V+D GK K +FD + + LK WIS A+A QR+GRAGR
Sbjct: 691 ILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGR 748
>gi|281350481|gb|EFB26065.1| hypothetical protein PANDA_013346 [Ailuropoda melanoleuca]
Length = 1312
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 79/118 (66%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN---SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVFLPG I L+ + +S FN S R + PLHS L + Q+++F PP GV KI
Sbjct: 776 ILVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVVHPLHSSLSSEEQQAVFVKPPVGVTKI 835
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+++TNIAETSITIDDIVYV+D GK K +D + +L+ ++S ANA QR+GRAGR
Sbjct: 836 IISTNIAETSITIDDIVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGR 893
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 36/55 (65%)
Query: 30 DAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+A K+ K SR++Q +L+ R+ LP+++ R+ +L ++ +Q+ VISG TG G
Sbjct: 444 NAKICKQFRIKQASRQFQSILQERQSLPAWEERETILKLLSEHQVLVISGMTGCG 498
>gi|344254992|gb|EGW11096.1| putative ATP-dependent RNA helicase YTHDC2 [Cricetulus griseus]
Length = 1268
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 80/118 (67%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLH-RSMCQSSFF--NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
IL+FLPG+D I L R + F N+ R+Q+ LHS + T QK + PP GVRKI
Sbjct: 463 ILIFLPGYDEIVGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKI 522
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+L+TNIAETSIT++D+V+V+D GK K +FD + + LK WIS A+A QR+GRAGR
Sbjct: 523 ILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGR 580
>gi|507959166|ref|XP_004686547.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2 [Condylura
cristata]
Length = 1397
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 80/118 (67%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLH-RSMCQSSFF--NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
IL+FLPG+D I L R + F N+ R+Q+ LHS + T QK + PP GVRKI
Sbjct: 592 ILIFLPGYDEIVGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKI 651
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+L+TNIAETSIT++D+V+V+D GK K +FD + + LK WIS A+A QR+GRAGR
Sbjct: 652 ILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGR 709
>gi|145351945|ref|XP_001420320.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580554|gb|ABO98613.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 811
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 56/115 (48%), Positives = 78/115 (67%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL+FLPG I +LH + + + SRF +IPLHS L + Q+ FN P G RK+V+A
Sbjct: 315 ILIFLPGMAEIRTLHDRLRANLKDSESRFLLIPLHSTLSSEEQRLTFNKAPPGKRKVVMA 374
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITIDD+V+V+D G+ + + +D ++ L W S A+++QRRGRAGR
Sbjct: 375 TNIAETSITIDDVVFVIDSGRVRETQYDPVSRMSALVTAWCSKASSRQRRGRAGR 429
>gi|511891767|ref|XP_004765573.1| PREDICTED: putative ATP-dependent RNA helicase DHX57 isoform X2
[Mustela putorius furo]
gi|511990199|ref|XP_004812806.1| PREDICTED: putative ATP-dependent RNA helicase DHX57 isoform X2
[Mustela putorius furo]
Length = 1403
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 59/118 (50%), Positives = 79/118 (66%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN---SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVFLPG I L+ + +S FN S R + PLHS L + Q+++F PP GV KI
Sbjct: 867 ILVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVVHPLHSSLSSEEQQAVFVKPPAGVTKI 926
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+++TNIAETSITIDD+VYV+D GK K +D + +L+ ++S ANA QR+GRAGR
Sbjct: 927 IISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGR 984
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 36/55 (65%)
Query: 30 DAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+A K+ K SR++Q +L+ R+ LP+++ R+ +L ++ +Q+ VISG TG G
Sbjct: 535 NAKICKQFRIKQASRQFQSILQERQSLPAWEERETILKLLSEHQVLVISGMTGCG 589
>gi|507958548|ref|XP_004686335.1| PREDICTED: putative ATP-dependent RNA helicase DHX57 [Condylura
cristata]
Length = 1387
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 59/118 (50%), Positives = 80/118 (67%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN---SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVFLPG I L+ + +S FN S+R + PLHS L + Q+++F PP GV KI
Sbjct: 851 ILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVVHPLHSSLSSEEQQAVFVKPPVGVTKI 910
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+++TNIAETSITIDD+VYV+D GK K +D + +L+ ++S ANA QR+GRAGR
Sbjct: 911 IISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGR 968
Score = 45.4 bits (106), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 32/45 (71%)
Query: 40 KLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
K SR++Q +L+ R+ LP+++ RD +L ++ +Q+ V+SG TG G
Sbjct: 529 KQASRQFQSILQERQSLPAWEERDTILKLLSKHQVLVVSGMTGCG 573
>gi|507552629|ref|XP_004660109.1| PREDICTED: putative ATP-dependent RNA helicase DHX57 isoform X2
[Jaculus jaculus]
Length = 1331
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 80/118 (67%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN---SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVFLPG I L+ + +S FN S+R I PLHS L + Q+++F PP GV KI
Sbjct: 795 ILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLHSSLSSEEQQAVFVKPPVGVTKI 854
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+++TNIAETSITIDD+VYV+D GK K +D + +L+ ++S ANA QR+GRAGR
Sbjct: 855 IISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGR 912
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 31/50 (62%)
Query: 35 KEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
K+ K S + +L+ R+ LP+++ R+ +L ++ +Q+ VISG TG G
Sbjct: 468 KQFRMKQASGHFHSILQERRSLPAWEERETILKLLSKHQVVVISGMTGCG 517
>gi|431907961|gb|ELK11568.1| Putative ATP-dependent RNA helicase YTHDC2 [Pteropus alecto]
Length = 1438
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 80/118 (67%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLH-RSMCQSSFF--NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
IL+FLPG+D I L R + F N+ R+Q+ LHS + T QK + PP GVRKI
Sbjct: 633 ILIFLPGYDEIVGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVLKNPPTGVRKI 692
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+L+TNIAETSIT++D+V+V+D GK K +FD + + LK WIS A+A QR+GRAGR
Sbjct: 693 ILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGR 750
>gi|307184869|gb|EFN71147.1| YTH domain-containing protein 2 [Camponotus floridanus]
Length = 1154
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 59/117 (50%), Positives = 78/117 (66%), Gaps = 2/117 (1%)
Query: 189 ILVFLPGWDTINSL-HRSMCQSSFFNSS-RFQIIPLHSMLPTVSQKSIFNTPPEGVRKIV 246
IL+FLPG+D I ++ R + N + R+ + LHS + T QK +F P+G RKI+
Sbjct: 585 ILIFLPGYDDIVTMRERINAEEKRMNQNLRYNLYVLHSNMQTCDQKKVFKPSPQGTRKII 644
Query: 247 LATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
L+TNI+ETSITIDD+VYV+D GK K +FD + TL WIS A AKQR+GRAGR
Sbjct: 645 LSTNISETSITIDDVVYVIDSGKVKEKSFDAISGVCTLTSNWISQACAKQRKGRAGR 701
Score = 38.5 bits (88), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 26/37 (70%)
Query: 48 EMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
++L RK LP + R+ +++ + N+Q+ +I+GETG G
Sbjct: 155 DVLHFRKSLPIFSAREEIINALNNHQVVIIAGETGCG 191
>gi|499004167|ref|XP_004535267.1| PREDICTED: dosage compensation regulator-like isoform X2 [Ceratitis
capitata]
Length = 1222
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 81/115 (70%), Gaps = 1/115 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+L+FLPGW+ I +L + + Q+S F +++I+P HS +P Q+ +F T P+GV KI+L+
Sbjct: 648 VLIFLPGWNLIFALMKYL-QNSQFGGPQYRILPCHSQIPREDQRKVFETVPDGVTKIILS 706
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITIDDIV+V+D K +M F +N+ + W + +N +QR+GRAGR
Sbjct: 707 TNIAETSITIDDIVFVIDICKARMKMFTSHNNLTSYATVWAARSNLEQRKGRAGR 761
Score = 42.4 bits (98), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 28/41 (68%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSF 372
++I +LL HI + PGA+L+FLPGW+ I +L + + S F
Sbjct: 630 ELIEALLAHIKSKNIPGAVLIFLPGWNLIFALMKYLQNSQF 670
>gi|499004163|ref|XP_004535266.1| PREDICTED: dosage compensation regulator-like isoform X1 [Ceratitis
capitata]
Length = 1226
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 81/115 (70%), Gaps = 1/115 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+L+FLPGW+ I +L + + Q+S F +++I+P HS +P Q+ +F T P+GV KI+L+
Sbjct: 652 VLIFLPGWNLIFALMKYL-QNSQFGGPQYRILPCHSQIPREDQRKVFETVPDGVTKIILS 710
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITIDDIV+V+D K +M F +N+ + W + +N +QR+GRAGR
Sbjct: 711 TNIAETSITIDDIVFVIDICKARMKMFTSHNNLTSYATVWAARSNLEQRKGRAGR 765
Score = 42.4 bits (98), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 28/41 (68%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSF 372
++I +LL HI + PGA+L+FLPGW+ I +L + + S F
Sbjct: 634 ELIEALLAHIKSKNIPGAVLIFLPGWNLIFALMKYLQNSQF 674
>gi|301777390|ref|XP_002924113.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like
[Ailuropoda melanoleuca]
Length = 1460
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 80/118 (67%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLH-RSMCQSSFF--NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
IL+FLPG+D I L R + F N+ R+Q+ LHS + T QK + PP GVRKI
Sbjct: 655 ILIFLPGYDEIVGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKI 714
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+L+TNIAETSIT++D+V+V+D GK K +FD + + LK WIS A+A QR+GRAGR
Sbjct: 715 ILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGR 772
>gi|395846034|ref|XP_003795720.1| PREDICTED: putative ATP-dependent RNA helicase DHX57 [Otolemur
garnettii]
Length = 1387
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 80/118 (67%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN---SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVFLPG I L+ + +S FN S+R I PLHS L + Q+++F PP GV KI
Sbjct: 851 ILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLHSSLSSEEQQAVFLKPPIGVTKI 910
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+++TNIAETSITIDD+VYV+D GK K +D + +L+ ++S ANA QR+GRAGR
Sbjct: 911 IISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGR 968
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 31/45 (68%)
Query: 40 KLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
K SR++Q L+ R+ LP+++ R+ +L ++ +Q+ VISG TG G
Sbjct: 529 KQASRQFQSTLQERQSLPAWEERETILKLLSRHQVVVISGMTGCG 573
>gi|507552627|ref|XP_004660108.1| PREDICTED: putative ATP-dependent RNA helicase DHX57 isoform X1
[Jaculus jaculus]
Length = 1384
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 80/118 (67%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN---SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVFLPG I L+ + +S FN S+R I PLHS L + Q+++F PP GV KI
Sbjct: 848 ILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLHSSLSSEEQQAVFVKPPVGVTKI 907
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+++TNIAETSITIDD+VYV+D GK K +D + +L+ ++S ANA QR+GRAGR
Sbjct: 908 IISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGR 965
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 31/50 (62%)
Query: 35 KEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
K+ K S + +L+ R+ LP+++ R+ +L ++ +Q+ VISG TG G
Sbjct: 521 KQFRMKQASGHFHSILQERRSLPAWEERETILKLLSKHQVVVISGMTGCG 570
>gi|393218466|gb|EJD03954.1| P-loop containing nucleoside triphosphate hydrolase protein
[Fomitiporia mediterranea MF3/22]
Length = 1353
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 58/123 (47%), Positives = 83/123 (67%), Gaps = 8/123 (6%)
Query: 189 ILVFLPGWDTINSLHR--SMCQSS------FFNSSRFQIIPLHSMLPTVSQKSIFNTPPE 240
+LVFLPGW+ I S+ + + +SS F + S+F + LHS +P Q+ IF+ PPE
Sbjct: 710 VLVFLPGWEEIQSVQKLLTTGESSRLFGLDFGDPSKFSLHVLHSSIPLAEQQVIFDPPPE 769
Query: 241 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 300
GVR+I+L+TNIAETS+TI D+VYVVD K K + +D + +I++L W+ +N QR GR
Sbjct: 770 GVRRIILSTNIAETSVTIPDVVYVVDTAKIKENRYDPERHISSLVSAWVGKSNLNQRAGR 829
Query: 301 AGR 303
AGR
Sbjct: 830 AGR 832
>gi|168002269|ref|XP_001753836.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694812|gb|EDQ81158.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 912
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 66/138 (47%), Positives = 81/138 (58%), Gaps = 8/138 (5%)
Query: 186 VVPILVFLPGWDTINSLHR---SMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGV 242
V ILVFLPG I L + S Q S ++ LH L QK +F PP G+
Sbjct: 414 VGAILVFLPGMLEIRKLQQRLQSSHQISALGLGGLWVLALHGSLSGEEQKRVFKKPPSGI 473
Query: 243 RKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAG 302
RK+VLATNIAETSITIDD+VYV+D G+ K +D ++ L+ WIS ANAKQRRGRAG
Sbjct: 474 RKVVLATNIAETSITIDDVVYVIDTGRHKEMRYDHNRGLSCLEDTWISKANAKQRRGRAG 533
Query: 303 RT-----LKRSETQQYPN 315
R L+ QQ+ N
Sbjct: 534 RVRPGCCLRLFSRQQFEN 551
>gi|357515767|ref|XP_003628172.1| Helicase associated domain family protein expressed [Medicago
truncatula]
gi|355522194|gb|AET02648.1| Helicase associated domain family protein expressed [Medicago
truncatula]
Length = 628
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 60/139 (43%), Positives = 81/139 (58%), Gaps = 1/139 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQII-PLHSMLPTVSQKSIFNTPPEGVRKIVL 247
+LVF+ GW I+ L + + +I H ++ T QK IF+ PP VRKIVL
Sbjct: 118 VLVFMTGWKDISRLRDGLQNHHLLGDRKSVLIQTCHGLMETFEQKLIFDKPPPNVRKIVL 177
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKR 307
ATN+AE SITI+DIV+++DCGKT S++D +N L P WIS A+A+QRRGRAG
Sbjct: 178 ATNVAEASITINDIVFIIDCGKTNESSYDALNNTPCLLPSWISQASARQRRGRAGHVQPG 237
Query: 308 SETQQYPNDVLNMLKDPEL 326
YP V + +L
Sbjct: 238 ECYHLYPKCVYEAFSEYQL 256
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 304 TLKRSETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSL 363
L +S Y + + L + + + +I ++L HIC +RPGA+LVF+ GW I+ L
Sbjct: 72 ALSKSTFANYSPNTRSSLYNWKPHCIGFKLIEAVLCHICRKERPGAVLVFMTGWKDISRL 131
Query: 364 HRSM 367
+
Sbjct: 132 RDGL 135
>gi|301777352|ref|XP_002924093.1| PREDICTED: putative ATP-dependent RNA helicase DHX57-like
[Ailuropoda melanoleuca]
Length = 1382
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 79/118 (66%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN---SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVFLPG I L+ + +S FN S R + PLHS L + Q+++F PP GV KI
Sbjct: 846 ILVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVVHPLHSSLSSEEQQAVFVKPPVGVTKI 905
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+++TNIAETSITIDDIVYV+D GK K +D + +L+ ++S ANA QR+GRAGR
Sbjct: 906 IISTNIAETSITIDDIVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGR 963
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 36/55 (65%)
Query: 30 DAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+A K+ K SR++Q +L+ R+ LP+++ R+ +L ++ +Q+ VISG TG G
Sbjct: 514 NAKICKQFRIKQASRQFQSILQERQSLPAWEERETILKLLSEHQVLVISGMTGCG 568
>gi|478525188|ref|XP_004436786.1| PREDICTED: putative ATP-dependent RNA helicase DHX57 [Ceratotherium
simum simum]
Length = 1384
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 59/118 (50%), Positives = 80/118 (67%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN---SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVFLPG I L+ + +S FN S+R + PLHS L + Q+++F PP GV KI
Sbjct: 848 ILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVVHPLHSSLSSEEQQAVFVKPPVGVTKI 907
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+++TNIAETSITIDD+VYV+D GK K +D + +L+ ++S ANA QR+GRAGR
Sbjct: 908 IISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGR 965
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 36/55 (65%)
Query: 30 DAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+A K+ K SR++Q +L+ R+ LP+++ R+ +L ++ +Q+ VISG TG G
Sbjct: 516 NAKICKQFRIKQASRQFQSILQERQSLPAWEERETILKLLSKHQVLVISGMTGCG 570
>gi|470642429|ref|XP_004325924.1| PREDICTED: putative ATP-dependent RNA helicase DHX57-like [Tursiops
truncatus]
Length = 932
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 59/119 (49%), Positives = 80/119 (67%), Gaps = 3/119 (2%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN---SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVFLPG I L+ + +S FN S+R + PLHS L + Q+++F PP GV KI
Sbjct: 465 ILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVVHPLHSSLSSEEQQAVFVKPPIGVTKI 524
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT 304
+++TNIAETSITIDD+VYV+D GK K +D + +L+ ++S ANA QR+GRAGR
Sbjct: 525 IISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGRV 583
Score = 42.7 bits (99), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 32/45 (71%)
Query: 40 KLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
K SR++Q +L+ R+ LP+++ R+ +L ++ +Q+ VISG TG G
Sbjct: 143 KQASRQFQSILQERQLLPAWEERENILKLLSKHQVLVISGMTGCG 187
>gi|291386901|ref|XP_002709800.1| PREDICTED: DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57 [Oryctolagus
cuniculus]
Length = 1444
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 80/118 (67%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN---SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVFLPG I L+ + +S FN S+R I PLHS L + Q+++F PP GV KI
Sbjct: 908 ILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLHSSLSSEEQQAVFIKPPLGVTKI 967
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+++TNIAETSITIDD+VYV+D GK K +D + +L+ ++S ANA QR+GRAGR
Sbjct: 968 IISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGR 1025
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 34/50 (68%)
Query: 35 KEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
K+ K SR++Q +L+ R+ LP+++ R+ +L ++ +Q+ VISG TG G
Sbjct: 581 KQFQIKQASRQFQSILQERQSLPAWEERENILKLLSRHQVVVISGMTGCG 630
>gi|472390152|ref|XP_004414391.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like
[Odobenus rosmarus divergens]
Length = 1427
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 80/118 (67%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLH-RSMCQSSFF--NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
IL+FLPG+D I L R + F N+ R+Q+ LHS + T QK + PP GVRKI
Sbjct: 622 ILIFLPGYDEIVGLKDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKI 681
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+L+TNIAETSIT++D+V+V+D GK K +FD + + LK WIS A+A QR+GRAGR
Sbjct: 682 ILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGR 739
>gi|195133600|ref|XP_002011227.1| GI16119 [Drosophila mojavensis]
gi|193907202|gb|EDW06069.1| GI16119 [Drosophila mojavensis]
Length = 1290
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 58/118 (49%), Positives = 79/118 (66%), Gaps = 1/118 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
IL+FLPG+ I ++ ++ S+ S ++ +IPLHS L + Q +F P G RKIVL
Sbjct: 758 ILIFLPGFQDIQAVLNALQDSAVGPRSGKYLLIPLHSALSSEDQALVFKRAPPGKRKIVL 817
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTL 305
+TNIAETS+TIDD V+V+DCG K FD N+ +L W+S ANAKQR+GRAGR +
Sbjct: 818 STNIAETSVTIDDCVFVIDCGLMKEKGFDSNRNMESLDLVWVSRANAKQRKGRAGRVM 875
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 38/58 (65%), Gaps = 4/58 (6%)
Query: 31 AAFKKEMIRKLQSRR----YQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
A+ + ++++ RR Y + +E R+KLP++ + ++ ++R+NQ+ VISGETG G
Sbjct: 428 ASMNRNLLKQFNDRRRESSYIKSIEGRRKLPAFAEIERIMALIRSNQVVVISGETGCG 485
>gi|414587184|tpg|DAA37755.1| TPA: hypothetical protein ZEAMMB73_165571 [Zea mays]
Length = 1185
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 67/147 (45%), Positives = 89/147 (60%), Gaps = 11/147 (7%)
Query: 189 ILVFLPGWDTINSL-HRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFLPG I+ L R F +S I+PLHS+L Q+ +F +PP+ RK+++
Sbjct: 879 ILVFLPGVAEIDLLIDRLSALVRFGGASSDWILPLHSLLGPSDQRKVFQSPPDNFRKVII 938
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR---- 303
AT+IAETSITIDD+VYVVD GK K + ++ ++++ +WIS ANAKQRRGRAGR
Sbjct: 939 ATDIAETSITIDDVVYVVDTGKHKENRYNPHKKMSSIVEDWISRANAKQRRGRAGRVKPG 998
Query: 304 ------TLKRSETQQYPNDVLNMLKDP 324
T R E P V ML+ P
Sbjct: 999 LCFCLYTRHRFENVMRPFQVPEMLRMP 1025
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 13/92 (14%)
Query: 31 AAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHLD 90
A KK++ K + Y +MLEAR LP + R L +++ N + V+SGETG G
Sbjct: 547 AILKKQLEDKRKLPNYLKMLEARASLPIARQRQHFLQLLKENDVVVVSGETGCG------ 600
Query: 91 FITLKRSETQQYPNDVLNMLKDPELEGVNNDV 122
+T Q P +L+ + + EL G N V
Sbjct: 601 -------KTTQVPQFILDDMIESELGGSCNIV 625
>gi|291222158|ref|XP_002731085.1| PREDICTED: ATP-dependent RNA helicase A-like protein-like
[Saccoglossus kowalevskii]
Length = 1325
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 64/128 (50%), Positives = 81/128 (63%), Gaps = 4/128 (3%)
Query: 180 LLRSM--LVVP--ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIF 235
LLR + L VP ILVFLPGW+ I +L R + F S + I+PLHS +P Q +F
Sbjct: 669 LLRYIKGLGVPGAILVFLPGWNLIFALMRHLQDHPEFGSRNYCILPLHSQIPREDQHRVF 728
Query: 236 NTPPEGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAK 295
PEGV KI+L+TNIAETSITI+D+V+V+D K KM F +N+ W S N +
Sbjct: 729 EPVPEGVTKIILSTNIAETSITINDVVFVIDSCKAKMKLFTSHNNMTNYATVWASKTNLE 788
Query: 296 QRRGRAGR 303
QRRGRAGR
Sbjct: 789 QRRGRAGR 796
Score = 41.6 bits (96), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 31/50 (62%), Gaps = 3/50 (6%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFF---NSCLL 378
++I SLL++I PGAILVFLPGW+ I +L R + F N C+L
Sbjct: 664 ELIESLLRYIKGLGVPGAILVFLPGWNLIFALMRHLQDHPEFGSRNYCIL 713
>gi|426349664|ref|XP_004042411.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
YTHDC2 [Gorilla gorilla gorilla]
Length = 1424
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 59/118 (50%), Positives = 80/118 (67%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLH-RSMCQSSFF--NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
+L+FLPG+D I L R + F N+ R+Q+ LHS + T QK + PP GVRKI
Sbjct: 619 VLIFLPGYDEIVGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKI 678
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+L+TNIAETSIT++D+V+V+D GK K +FD + + LK WIS A+A QR+GRAGR
Sbjct: 679 ILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGR 736
>gi|383860720|ref|XP_003705837.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like
[Megachile rotundata]
Length = 1166
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/125 (50%), Positives = 78/125 (62%), Gaps = 12/125 (9%)
Query: 189 ILVFLPGWD-------TINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEG 241
+L+FLPG+D IN+ R M Q R+ + LHS + T QK +F P G
Sbjct: 585 LLIFLPGYDDIVTMREKINNEEREMNQGL-----RYVLYILHSNMQTCDQKKVFKPSPLG 639
Query: 242 VRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRA 301
RKI+L+TNIAETSITIDD+VYV+D GK K +FD + TLK WIS A AKQR+GRA
Sbjct: 640 TRKIILSTNIAETSITIDDVVYVIDSGKVKEKSFDAISGVCTLKSNWISQACAKQRKGRA 699
Query: 302 GRTLK 306
GR K
Sbjct: 700 GRCRK 704
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 31/56 (55%)
Query: 48 EMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHLDFITLKRSETQQYP 103
++L RK LP + R+ +L+ + NQ+ +I GETGSG + L+ + + P
Sbjct: 156 DVLNYRKALPIFGFREDILNALNTNQVIIIGGETGSGKTTQVPQFILEHCQQRHQP 211
>gi|145343060|ref|XP_001416284.1| Dhx57-like DEXH-box helicase, probable [Ostreococcus lucimarinus
CCE9901]
gi|144576509|gb|ABO94577.1| Dhx57-like DEXH-box helicase, probable [Ostreococcus lucimarinus
CCE9901]
Length = 1545
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/119 (48%), Positives = 77/119 (64%), Gaps = 3/119 (2%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNS---SRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
IL+F+PG I L R + QS + +I+PL+ L + QK IF PP+GVRKI
Sbjct: 1029 ILIFMPGQFEILRLIRKLEQSRLLEADDVGALRILPLYGSLSSKDQKRIFERPPDGVRKI 1088
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT 304
V+ATNIAETS+TIDD+ YV+D G+ K +D ++ L W+S A AKQRRGR+GRT
Sbjct: 1089 VVATNIAETSVTIDDVRYVIDTGRAKEMQYDTLRGLSVLADTWVSQAAAKQRRGRSGRT 1147
>gi|512940337|ref|XP_004909163.1| PREDICTED: putative ATP-dependent RNA helicase DHX57 isoform X1
[Heterocephalus glaber]
Length = 1469
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 80/118 (67%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN---SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVFLPG I L+ + +S FN S+R I PLHS L + Q+++F PP GV KI
Sbjct: 933 ILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCIIHPLHSSLSSEEQQAVFIKPPVGVTKI 992
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+++TNIAETSITIDD+VYV+D GK K +D + +L+ ++S ANA QR+GRAGR
Sbjct: 993 IISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGR 1050
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 32/45 (71%)
Query: 40 KLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
K SR++Q +L+ R+ LP+++ R+ +L ++ +Q+ VISG TG G
Sbjct: 611 KQASRQFQSVLQERQSLPAWEERETILKLLSKHQVVVISGMTGCG 655
>gi|397512911|ref|XP_003826777.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2 [Pan
paniscus]
Length = 1430
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/118 (50%), Positives = 80/118 (67%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLH-RSMCQSSFF--NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
+L+FLPG+D I L R + F N+ R+Q+ LHS + T QK + PP GVRKI
Sbjct: 625 VLIFLPGYDEIVGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKI 684
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+L+TNIAETSIT++D+V+V+D GK K +FD + + LK WIS A+A QR+GRAGR
Sbjct: 685 ILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGR 742
>gi|114601166|ref|XP_517881.2| PREDICTED: probable ATP-dependent RNA helicase YTHDC2 isoform 2
[Pan troglodytes]
Length = 1430
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/118 (50%), Positives = 80/118 (67%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLH-RSMCQSSFF--NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
+L+FLPG+D I L R + F N+ R+Q+ LHS + T QK + PP GVRKI
Sbjct: 625 VLIFLPGYDEIVGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKI 684
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+L+TNIAETSIT++D+V+V+D GK K +FD + + LK WIS A+A QR+GRAGR
Sbjct: 685 ILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGR 742
>gi|512940339|ref|XP_004909164.1| PREDICTED: putative ATP-dependent RNA helicase DHX57 isoform X2
[Heterocephalus glaber]
Length = 1469
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 80/118 (67%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN---SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVFLPG I L+ + +S FN S+R I PLHS L + Q+++F PP GV KI
Sbjct: 933 ILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCIIHPLHSSLSSEEQQAVFIKPPVGVTKI 992
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+++TNIAETSITIDD+VYV+D GK K +D + +L+ ++S ANA QR+GRAGR
Sbjct: 993 IISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGR 1050
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 32/45 (71%)
Query: 40 KLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
K SR++Q +L+ R+ LP+++ R+ +L ++ +Q+ VISG TG G
Sbjct: 611 KQASRQFQSVLQERQSLPAWEERETILKLLSKHQVVVISGMTGCG 655
>gi|465981404|ref|XP_004265081.1| PREDICTED: putative ATP-dependent RNA helicase DHX57 [Orcinus orca]
Length = 1383
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/118 (50%), Positives = 80/118 (67%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN---SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVFLPG I L+ + +S FN S+R + PLHS L + Q+++F PP GV KI
Sbjct: 846 ILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVVHPLHSSLSSEEQQAVFVKPPIGVTKI 905
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+++TNIAETSITIDD+VYV+D GK K +D + +L+ ++S ANA QR+GRAGR
Sbjct: 906 IISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGR 963
Score = 42.7 bits (99), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 32/45 (71%)
Query: 40 KLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
K SR++Q +L+ R+ LP+++ R+ +L ++ +Q+ VISG TG G
Sbjct: 524 KQASRQFQSILQERQLLPAWEERENILKLLSKHQVLVISGMTGCG 568
>gi|410903275|ref|XP_003965119.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like
[Takifugu rubripes]
Length = 1382
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 81/118 (68%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLH-RSMCQSSFFN--SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
IL+FLPG+D I ++ R + S F+ S R+Q+ LHS + T+ QK TPP GVRKI
Sbjct: 612 ILIFLPGYDEIVAMRDRILYNDSRFSDVSCRYQLFILHSEMQTLDQKKALKTPPSGVRKI 671
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+L+TNIAETSITI D+V+V+D GK K ++D ++ LK WIS A+ QR+GRAGR
Sbjct: 672 ILSTNIAETSITISDVVFVIDSGKVKEKSYDTLSRVSMLKTIWISKASVLQRKGRAGR 729
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 27/37 (72%)
Query: 327 EGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSL 363
E V+ D+I LL +IC+T GAIL+FLPG+D I ++
Sbjct: 589 ELVDLDLIMDLLHYICSTSSDGAILIFLPGYDEIVAM 625
>gi|390348136|ref|XP_794990.3| PREDICTED: putative ATP-dependent RNA helicase DHX57, partial
[Strongylocentrotus purpuratus]
Length = 1202
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/118 (50%), Positives = 79/118 (66%), Gaps = 4/118 (3%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNS---SRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
IL+FLPG I L+ + QSS ++++IPLHS L + Q + F+ P EG+ KI
Sbjct: 666 ILIFLPGLGEITDLYEQL-QSSLCGPRKPKKYKLIPLHSSLSSEDQNAAFDKPQEGITKI 724
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
V+ATNIAETSITIDDIV+V+D G+ K +D + +L+ W+S ANA QRRGRAGR
Sbjct: 725 VIATNIAETSITIDDIVFVIDAGRMKEKRYDSGKRMESLETVWVSKANAMQRRGRAGR 782
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 35 KEMIRKLQ-SRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
KE +K Q S Y+ MLE R+ LP+++ +D +LD + NQ+ V+SG TG G
Sbjct: 334 KEQFKKAQMSNSYKSMLERREALPAWKEQDNILDTLSKNQVLVVSGSTGCG 384
>gi|410955423|ref|XP_003984353.1| PREDICTED: putative ATP-dependent RNA helicase DHX57 [Felis catus]
Length = 1380
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/118 (50%), Positives = 80/118 (67%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN---SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVFLPG I L+ + +S FN S+R + PLHS L + Q+++F PP GV KI
Sbjct: 844 ILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVVHPLHSSLSSEEQQAVFVKPPVGVTKI 903
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+++TNIAETSITIDD+VYV+D GK K +D + +L+ ++S ANA QR+GRAGR
Sbjct: 904 IISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGR 961
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 37/55 (67%)
Query: 30 DAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+A K+ K SR++Q +L+ R+ LP+++ ++ +L ++ ++Q+ VISG TG G
Sbjct: 512 NAKLCKQFRIKQASRQFQAILQERQSLPAWEEKETILKLLSDHQVLVISGMTGCG 566
>gi|403256107|ref|XP_003920739.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2 [Saimiri
boliviensis boliviensis]
Length = 1430
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/118 (50%), Positives = 80/118 (67%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLH-RSMCQSSFF--NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
+L+FLPG+D I L R + F N+ R+Q+ LHS + T QK + PP GVRKI
Sbjct: 625 VLIFLPGYDEIVGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKI 684
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+L+TNIAETSIT++D+V+V+D GK K +FD + + LK WIS A+A QR+GRAGR
Sbjct: 685 ILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGR 742
>gi|414587185|tpg|DAA37756.1| TPA: hypothetical protein ZEAMMB73_165571 [Zea mays]
Length = 1380
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/150 (45%), Positives = 90/150 (60%), Gaps = 11/150 (7%)
Query: 189 ILVFLPGWDTINSL-HRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFLPG I+ L R F +S I+PLHS+L Q+ +F +PP+ RK+++
Sbjct: 879 ILVFLPGVAEIDLLIDRLSALVRFGGASSDWILPLHSLLGPSDQRKVFQSPPDNFRKVII 938
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR---- 303
AT+IAETSITIDD+VYVVD GK K + ++ ++++ +WIS ANAKQRRGRAGR
Sbjct: 939 ATDIAETSITIDDVVYVVDTGKHKENRYNPHKKMSSIVEDWISRANAKQRRGRAGRVKPG 998
Query: 304 ------TLKRSETQQYPNDVLNMLKDPELE 327
T R E P V ML+ P E
Sbjct: 999 LCFCLYTRHRFENVMRPFQVPEMLRMPLTE 1028
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 13/92 (14%)
Query: 31 AAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHLD 90
A KK++ K + Y +MLEAR LP + R L +++ N + V+SGETG G
Sbjct: 547 AILKKQLEDKRKLPNYLKMLEARASLPIARQRQHFLQLLKENDVVVVSGETGCG------ 600
Query: 91 FITLKRSETQQYPNDVLNMLKDPELEGVNNDV 122
+T Q P +L+ + + EL G N V
Sbjct: 601 -------KTTQVPQFILDDMIESELGGSCNIV 625
>gi|342866455|gb|EGU72116.1| hypothetical protein FOXB_17360 [Fusarium oxysporum Fo5176]
Length = 1349
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/115 (53%), Positives = 78/115 (67%), Gaps = 5/115 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL+FLPG IN R++ NS ++PLH+ L T QK +F+ P G RK+V+A
Sbjct: 842 ILIFLPGVGEINQACRAL---KAINS--LHVLPLHASLETREQKRVFSGAPPGKRKVVVA 896
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TN+AETSITIDDIV VVD GK K ++FDV++N+ L+ W S A KQRRGRAGR
Sbjct: 897 TNVAETSITIDDIVVVVDSGKVKETSFDVQNNMRKLEETWASRAACKQRRGRAGR 951
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 41/57 (71%)
Query: 28 VLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+ D +++ +R+ +S + M+ R+ LP++QMR+A++ VR+N +T+ISGETGSG
Sbjct: 553 IKDEKSREQWLRRQESSSLKNMVSKRQGLPAWQMREAIIGTVRSNHVTIISGETGSG 609
>gi|512954299|ref|XP_004839517.1| PREDICTED: putative ATP-dependent RNA helicase DHX57 [Heterocephalus
glaber]
Length = 1454
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 80/118 (67%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN---SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVFLPG I L+ + +S FN S+R I PLHS L + Q+++F PP GV KI
Sbjct: 918 ILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCIIHPLHSSLSSEEQQAVFIKPPVGVTKI 977
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+++TNIAETSITIDD+VYV+D GK K +D + +L+ ++S ANA QR+GRAGR
Sbjct: 978 IISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGR 1035
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 32/45 (71%)
Query: 40 KLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
K SR++Q +L+ R+ LP+++ R+ +L ++ +Q+ VISG TG G
Sbjct: 611 KQASRQFQSVLQERQSLPAWEERETILKLLSKHQVVVISGMTGCG 655
>gi|345488714|ref|XP_003425968.1| PREDICTED: dosage compensation regulator-like isoform 2 [Nasonia
vitripennis]
Length = 1076
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/115 (48%), Positives = 73/115 (63%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+L+FLPGW+ I +L + + Q F + IIPLHS LP Q+ +F+ P G KI+L
Sbjct: 475 VLIFLPGWNLIFALMKHLQQHPLFGGVDYVIIPLHSQLPREDQRKVFDPVPPGKTKIILT 534
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITIDD+VYV+D K KM F +N+ W S N +QR+GRAGR
Sbjct: 535 TNIAETSITIDDVVYVIDSCKAKMKLFTSHNNMTNYATVWASKTNLEQRKGRAGR 589
Score = 41.6 bits (96), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 49/100 (49%), Gaps = 11/100 (11%)
Query: 287 EWISLANAKQRRGRAG-----------RTLKRSETQQYPNDVLNMLKDPELEGVNNDVIF 335
+++ + +K+R+ R+ L ++ Y N ++ + ++ ++I
Sbjct: 401 KFVPVLESKKRKSRSNDNDDLPTDEVEENLNKNVGGNYSVQTKNAMEQLTEKEISFELIE 460
Query: 336 SLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
SLL++I PGA+L+FLPGW+ I +L + + Q F
Sbjct: 461 SLLRYIKDQNIPGAVLIFLPGWNLIFALMKHLQQHPLFGG 500
>gi|57098573|ref|XP_540155.1| PREDICTED: putative ATP-dependent RNA helicase DHX57 isoform 1
[Canis lupus familiaris]
Length = 1382
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/118 (50%), Positives = 79/118 (66%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN---SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVFLPG I L+ + +S FN S R + PLHS L + Q+++F PP GV KI
Sbjct: 846 ILVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVVHPLHSSLSSEEQQAVFVKPPVGVTKI 905
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+++TNIAETSITIDD+VYV+D GK K +D + +L+ ++S ANA QR+GRAGR
Sbjct: 906 IISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGR 963
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 36/55 (65%)
Query: 30 DAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+A K+ K SR++Q +L+ R+ LP+++ R+ +L ++ +Q+ VISG TG G
Sbjct: 514 NAKICKQFRIKQASRQFQSILQERQSLPAWEERETILKLLSEHQVLVISGMTGCG 568
>gi|475667418|gb|EMT65207.1| Putative ATP-dependent RNA helicase ucp12 [Fusarium oxysporum f.
sp. cubense race 4]
Length = 1349
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/115 (53%), Positives = 78/115 (67%), Gaps = 5/115 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL+FLPG IN R++ NS ++PLH+ L T QK +F+ P G RK+V+A
Sbjct: 842 ILIFLPGVGEINQACRAL---KAINS--LHVLPLHASLETREQKRVFSGAPPGKRKVVVA 896
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TN+AETSITIDDIV VVD GK K ++FDV++N+ L+ W S A KQRRGRAGR
Sbjct: 897 TNVAETSITIDDIVVVVDSGKVKETSFDVQNNMRKLEETWASRAACKQRRGRAGR 951
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 41/57 (71%)
Query: 28 VLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+ D +++ +R+ +S + M+ R+ LP++QMR+A++ VR+N +T+ISGETGSG
Sbjct: 553 IKDEKSREQWLRRQESSSLKNMVSKRQGLPAWQMREAIIGTVRSNHVTIISGETGSG 609
>gi|47220387|emb|CAF98486.1| unnamed protein product [Tetraodon nigroviridis]
Length = 882
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/133 (42%), Positives = 78/133 (58%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+L FLPGW I ++ + + F+S I+PLHS L Q+++F P G RKIVL
Sbjct: 376 VLCFLPGWQDIRAVQEKLEERQHFSSGSQMILPLHSSLSVADQQAVFQRPQVGQRKIVLT 435
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETS+TIDD+V+VVD G K N+D ++ L WIS +N QR+GRAGR +
Sbjct: 436 TNIAETSVTIDDVVHVVDTGTHKEQNYDPLTKVSCLDTVWISRSNVTQRKGRAGRCQPGN 495
Query: 309 ETQQYPNDVLNML 321
+P L +
Sbjct: 496 SYHLFPRKQLESM 508
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 26/44 (59%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
D++ +++HI PGA+L FLPGW I ++ + + F+S
Sbjct: 358 DLVADVIEHIDKCGEPGAVLCFLPGWQDIRAVQEKLEERQHFSS 401
>gi|350581003|ref|XP_003123893.3| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like, partial
[Sus scrofa]
Length = 1151
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/118 (50%), Positives = 80/118 (67%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLH-RSMCQSSFF--NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
+L+FLPG+D I L R + F N+ R+Q+ LHS + T QK + PP GVRKI
Sbjct: 346 VLIFLPGYDEIVGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKI 405
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+L+TNIAETSIT++D+V+V+D GK K +FD + + LK WIS A+A QR+GRAGR
Sbjct: 406 ILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGR 463
>gi|254939654|ref|NP_001157231.1| putative ATP-dependent RNA helicase DHX57 isoform 1 [Mus musculus]
gi|94710282|sp|Q6P5D3.2|DHX57_MOUSE RecName: Full=Putative ATP-dependent RNA helicase DHX57; AltName:
Full=DEAH box protein 57
gi|40787832|gb|AAH65169.1| Dhx57 protein [Mus musculus]
Length = 1388
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/118 (50%), Positives = 79/118 (66%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN---SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
+LVFLPG I L+ + +S FN S R I PLHS L + Q+++F PP GV KI
Sbjct: 852 VLVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVIHPLHSSLSSEEQQAVFVKPPMGVTKI 911
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+++TNIAETSITIDD+VYV+D GK K +D + +L+ ++S ANA QR+GRAGR
Sbjct: 912 IISTNIAETSITIDDVVYVIDSGKMKEKRYDAGKGMESLEDTFVSQANALQRKGRAGR 969
Score = 41.6 bits (96), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 31/45 (68%)
Query: 40 KLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
K SR++ +L+ R+ LP+++ R+ +L ++ +Q+ VISG TG G
Sbjct: 529 KQASRQFHAILQERQLLPAWEERETILKLLSKHQVVVISGMTGCG 573
>gi|38614392|gb|AAH62952.1| DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57 [Mus musculus]
Length = 1335
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/118 (50%), Positives = 79/118 (66%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN---SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
+LVFLPG I L+ + +S FN S R I PLHS L + Q+++F PP GV KI
Sbjct: 799 VLVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVIHPLHSSLSSEEQQAVFVKPPMGVTKI 858
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+++TNIAETSITIDD+VYV+D GK K +D + +L+ ++S ANA QR+GRAGR
Sbjct: 859 IISTNIAETSITIDDVVYVIDSGKMKEKRYDAGKGMESLEDTFVSQANALQRKGRAGR 916
Score = 41.6 bits (96), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 31/45 (68%)
Query: 40 KLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
K SR++ +L+ R+ LP+++ R+ +L ++ +Q+ VISG TG G
Sbjct: 476 KQASRQFHAILQERQLLPAWEERETILKLLSKHQVVVISGMTGCG 520
>gi|254939651|ref|NP_945180.2| putative ATP-dependent RNA helicase DHX57 isoform 2 [Mus musculus]
Length = 1335
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/118 (50%), Positives = 79/118 (66%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN---SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
+LVFLPG I L+ + +S FN S R I PLHS L + Q+++F PP GV KI
Sbjct: 799 VLVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVIHPLHSSLSSEEQQAVFVKPPMGVTKI 858
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+++TNIAETSITIDD+VYV+D GK K +D + +L+ ++S ANA QR+GRAGR
Sbjct: 859 IISTNIAETSITIDDVVYVIDSGKMKEKRYDAGKGMESLEDTFVSQANALQRKGRAGR 916
Score = 41.6 bits (96), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 31/45 (68%)
Query: 40 KLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
K SR++ +L+ R+ LP+++ R+ +L ++ +Q+ VISG TG G
Sbjct: 476 KQASRQFHAILQERQLLPAWEERETILKLLSKHQVVVISGMTGCG 520
>gi|300793704|ref|NP_001178836.1| DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57 [Rattus norvegicus]
Length = 1391
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 79/118 (66%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN---SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVFLPG I L+ + +S FN S R I PLHS L + Q+++F PP GV KI
Sbjct: 855 ILVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVIHPLHSSLSSEEQQAVFVKPPLGVTKI 914
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+++TNIAETSITIDD+VYV+D GK K +D + +L+ ++S ANA QR+GRAGR
Sbjct: 915 IISTNIAETSITIDDVVYVIDSGKMKEKRYDAGKGMESLEDTFVSQANALQRKGRAGR 972
Score = 42.0 bits (97), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 31/45 (68%)
Query: 40 KLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
K SR++ +L+ R+ LP+++ R+ +L ++ +Q+ VISG TG G
Sbjct: 532 KQASRQFHAILQERQLLPAWEERETILKLLSKHQVVVISGMTGCG 576
>gi|47077415|dbj|BAD18595.1| unnamed protein product [Homo sapiens]
Length = 1340
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/118 (50%), Positives = 80/118 (67%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLH-RSMCQSSFF--NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
+L+FLPG+D I L R + F N+ R+Q+ LHS + T QK + PP GVRKI
Sbjct: 535 VLIFLPGYDEIVGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKI 594
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+L+TNIAETSIT++D+V+V+D GK K +FD + + LK WIS A+A QR+GRAGR
Sbjct: 595 ILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGR 652
>gi|410923739|ref|XP_003975339.1| PREDICTED: putative ATP-dependent RNA helicase DHX30-like [Takifugu
rubripes]
Length = 949
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/115 (48%), Positives = 73/115 (63%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+L FLPGW I ++ + + F+S I+PLHS L Q+++F P G RKIVL
Sbjct: 584 VLCFLPGWQDIKAVQEKLEKRRHFSSGSQMILPLHSSLSVADQQAVFQRPQVGQRKIVLT 643
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETS+TIDDIV+VVD G K N+D ++ L WIS +N QR+GRAGR
Sbjct: 644 TNIAETSVTIDDIVHVVDTGTHKEQNYDPLTKVSCLDTVWISRSNVTQRKGRAGR 698
>gi|472381324|ref|XP_004410058.1| PREDICTED: putative ATP-dependent RNA helicase DHX57 [Odobenus
rosmarus divergens]
Length = 1378
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/118 (50%), Positives = 79/118 (66%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN---SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVFLPG I L+ + +S FN S R + PLHS L + Q+++F PP GV KI
Sbjct: 842 ILVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVVHPLHSSLSSEEQQAVFVKPPVGVTKI 901
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+++TNIAETSITIDD+VYV+D GK K +D + +L+ ++S ANA QR+GRAGR
Sbjct: 902 IISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGR 959
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 36/55 (65%)
Query: 30 DAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+A K+ K SR++Q +L+ R+ LP+++ R+ +L ++ +Q+ VISG TG G
Sbjct: 510 NAKICKQFRIKQASRQFQSILQERQSLPAWEERETILKLLSEHQVLVISGMTGCG 564
>gi|41946845|gb|AAH66091.1| DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57 [Mus musculus]
Length = 1335
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/118 (50%), Positives = 79/118 (66%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN---SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
+LVFLPG I L+ + +S FN S R I PLHS L + Q+++F PP GV KI
Sbjct: 799 VLVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVIHPLHSSLSSEEQQAVFVKPPMGVTKI 858
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+++TNIAETSITIDD+VYV+D GK K +D + +L+ ++S ANA QR+GRAGR
Sbjct: 859 IISTNIAETSITIDDVVYVIDSGKMKEKRYDAGKGMESLEDTFVSQANALQRKGRAGR 916
Score = 41.6 bits (96), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 31/45 (68%)
Query: 40 KLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
K SR++ +L+ R+ LP+++ R+ +L ++ +Q+ VISG TG G
Sbjct: 476 KQASRQFHAILQERQLLPAWEERETILKLLSKHQVVVISGMTGCG 520
>gi|308809405|ref|XP_003082012.1| mRNA splicing factor ATP-dependent RNA helicase (ISS), partial
[Ostreococcus tauri]
gi|116060479|emb|CAL55815.1| mRNA splicing factor ATP-dependent RNA helicase (ISS), partial
[Ostreococcus tauri]
Length = 1680
Score = 117 bits (294), Expect = 1e-23, Method: Composition-based stats.
Identities = 55/115 (47%), Positives = 78/115 (67%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL+FLPG I +LH + + RF +IPLHS L + Q+ F+ PP GVRK+V+A
Sbjct: 751 ILIFLPGMAEIRTLHDQLRANLEDVEKRFLLIPLHSTLSSEEQRLTFSRPPPGVRKVVMA 810
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+D+V+V+D G+ + + +D ++ L W S A+++QRRGRAGR
Sbjct: 811 TNIAETSITIEDVVFVIDSGRVRETQYDPVTRMSALVTAWCSKASSRQRRGRAGR 865
Score = 43.1 bits (100), Expect = 0.38, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 36/61 (59%), Gaps = 8/61 (13%)
Query: 32 AFKKEMIRKL--------QSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGS 83
A K E+ RKL +S+ +++M E R+KLP+ +++ VL+ + + VISG TG
Sbjct: 419 AQKAEISRKLLELELAKEKSKEWRDMQEVRRKLPASELKSVVLESIEASSAAVISGATGC 478
Query: 84 G 84
G
Sbjct: 479 G 479
>gi|502122240|ref|XP_004497648.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like isoform
X2 [Cicer arietinum]
Length = 852
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/106 (52%), Positives = 75/106 (70%), Gaps = 1/106 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFL GWD I+ L + ++ N S+F I+P+H +PT+ Q IF+ PP RKIVL
Sbjct: 361 ILVFLTGWDEISKLLDKLEGNNLLGNRSKFLILPIHGSMPTIDQCEIFDRPPPNKRKIVL 420
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLAN 293
ATNIAE+SITIDD+VYV+DCGK K +++D + +A L P WIS A+
Sbjct: 421 ATNIAESSITIDDVVYVIDCGKAKETSYDALNKLACLLPSWISKAS 466
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%)
Query: 11 THSVTSWETRQKLLNDPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVR 70
T ++ S ++Q + L AA K+ S +EM R+KLP+++M+ L VR
Sbjct: 39 TTTIKSASSQQGDYSKEKLSAALKERQELVQASDSLKEMKSFREKLPAFKMKSEFLKAVR 98
Query: 71 NNQITVISGETGSGPPLHL 89
NQ+ V+SGETG G L
Sbjct: 99 ENQVLVVSGETGCGKTTQL 117
>gi|297265851|ref|XP_001102912.2| PREDICTED: putative ATP-dependent RNA helicase DHX57-like [Macaca
mulatta]
Length = 1284
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 80/118 (67%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN---SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVFLPG I L+ + +S FN S+R I PLHS L + Q+++F PP GV KI
Sbjct: 748 ILVFLPGLAEIKMLYEQLQCNSLFNNRRSNRCVIHPLHSSLSSEEQQAVFVKPPVGVTKI 807
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+++TNIAETSITIDD+VYV+D GK K +D + +L+ ++S ANA QR+GRAGR
Sbjct: 808 IISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGR 865
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 36/50 (72%)
Query: 35 KEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
K+ K SR++Q +L+ R+ LP+++ R+ +L+++R +Q+ VISG TG G
Sbjct: 421 KQFRMKQASRQFQSILQERQSLPAWEERETILNLLRKHQVVVISGMTGCG 470
>gi|26343589|dbj|BAC35451.1| unnamed protein product [Mus musculus]
Length = 1025
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/118 (50%), Positives = 79/118 (66%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN---SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
+LVFLPG I L+ + +S FN S R I PLHS L + Q+++F PP GV KI
Sbjct: 852 VLVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVIHPLHSSLSSEEQQAVFVKPPMGVTKI 911
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+++TNIAETSITIDD+VYV+D GK K +D + +L+ ++S ANA QR+GRAGR
Sbjct: 912 IISTNIAETSITIDDVVYVIDSGKMKEKRYDAGKGMESLEDTFVSQANALQRKGRAGR 969
Score = 41.6 bits (96), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 31/45 (68%)
Query: 40 KLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
K SR++ +L+ R+ LP+++ R+ +L ++ +Q+ VISG TG G
Sbjct: 529 KQASRQFHAILQERQLLPAWEERETILKLLSKHQVVVISGMTGCG 573
>gi|345488712|ref|XP_001604965.2| PREDICTED: dosage compensation regulator-like isoform 1 [Nasonia
vitripennis]
Length = 1259
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/115 (48%), Positives = 73/115 (63%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+L+FLPGW+ I +L + + Q F + IIPLHS LP Q+ +F+ P G KI+L
Sbjct: 658 VLIFLPGWNLIFALMKHLQQHPLFGGVDYVIIPLHSQLPREDQRKVFDPVPPGKTKIILT 717
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITIDD+VYV+D K KM F +N+ W S N +QR+GRAGR
Sbjct: 718 TNIAETSITIDDVVYVIDSCKAKMKLFTSHNNMTNYATVWASKTNLEQRKGRAGR 772
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 49/100 (49%), Gaps = 11/100 (11%)
Query: 287 EWISLANAKQRRGRAG-----------RTLKRSETQQYPNDVLNMLKDPELEGVNNDVIF 335
+++ + +K+R+ R+ L ++ Y N ++ + ++ ++I
Sbjct: 584 KFVPVLESKKRKSRSNDNDDLPTDEVEENLNKNVGGNYSVQTKNAMEQLTEKEISFELIE 643
Query: 336 SLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
SLL++I PGA+L+FLPGW+ I +L + + Q F
Sbjct: 644 SLLRYIKDQNIPGAVLIFLPGWNLIFALMKHLQQHPLFGG 683
>gi|449274554|gb|EMC83655.1| Putative ATP-dependent RNA helicase DHX57 [Columba livia]
Length = 1371
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/118 (47%), Positives = 80/118 (67%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN---SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
+L+FLPG I L+ + ++ FN S R + PLHS L + Q+++F PPEGV KI
Sbjct: 834 VLIFLPGLAEIKMLYEQLQSNALFNNRHSKRCVVYPLHSSLSSEEQQAVFLRPPEGVIKI 893
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+++TNIAETS+TIDD+VYV+D GK K +D + +L+ ++S ANA QR+GRAGR
Sbjct: 894 IISTNIAETSVTIDDVVYVIDSGKMKEKRYDPSKGMESLEDTFVSKANALQRKGRAGR 951
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 46/76 (60%), Gaps = 11/76 (14%)
Query: 40 KLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG-----PPLHLDFITL 94
K SR YQ +L R+KLP++Q R+ +LD+++N+Q+ V+SG TG G P LDF
Sbjct: 513 KKSSRHYQSLLYERQKLPAWQERENILDLLKNHQVLVVSGMTGCGKTTQIPQFILDF--- 569
Query: 95 KRSETQQYPNDVLNML 110
Q P++V N++
Sbjct: 570 ---SLQGSPSNVANII 582
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Query: 317 VLNMLKDPELEGVNNDVIFSLLQHICTTQR---PGAILVFLPGWDTINSLHRSMCQSSFF 373
VL + +L+ VN ++I +LL+ I + PGA+L+FLPG I L+ + ++ F
Sbjct: 798 VLKTMSVMDLDKVNLELIEALLEWIVAGRHSYPPGAVLIFLPGLAEIKMLYEQLQSNALF 857
Query: 374 NS-----CLLY 379
N+ C++Y
Sbjct: 858 NNRHSKRCVVY 868
>gi|502122238|ref|XP_004497647.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like isoform
X1 [Cicer arietinum]
Length = 1034
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/106 (52%), Positives = 75/106 (70%), Gaps = 1/106 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFL GWD I+ L + ++ N S+F I+P+H +PT+ Q IF+ PP RKIVL
Sbjct: 543 ILVFLTGWDEISKLLDKLEGNNLLGNRSKFLILPIHGSMPTIDQCEIFDRPPPNKRKIVL 602
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLAN 293
ATNIAE+SITIDD+VYV+DCGK K +++D + +A L P WIS A+
Sbjct: 603 ATNIAESSITIDDVVYVIDCGKAKETSYDALNKLACLLPSWISKAS 648
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%)
Query: 11 THSVTSWETRQKLLNDPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVR 70
T ++ S ++Q + L AA K+ S +EM R+KLP+++M+ L VR
Sbjct: 221 TTTIKSASSQQGDYSKEKLSAALKERQELVQASDSLKEMKSFREKLPAFKMKSEFLKAVR 280
Query: 71 NNQITVISGETGSGPPLHL 89
NQ+ V+SGETG G L
Sbjct: 281 ENQVLVVSGETGCGKTTQL 299
>gi|291410671|ref|XP_002721618.1| PREDICTED: YTH domain containing 2 [Oryctolagus cuniculus]
Length = 1533
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/118 (50%), Positives = 80/118 (67%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLH-RSMCQSSFF--NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
+L+FLPG+D I L R + F N+ R+Q+ LHS + T QK + PP GVRKI
Sbjct: 728 VLIFLPGYDEIVGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKI 787
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+L+TNIAETSIT++D+V+V+D GK K +FD + + LK WIS A+A QR+GRAGR
Sbjct: 788 ILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGR 845
>gi|432114051|gb|ELK36098.1| Putative ATP-dependent RNA helicase DHX57 [Myotis davidii]
Length = 1403
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/118 (50%), Positives = 79/118 (66%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN---SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVFLPG I L+ + +S FN S R + PLHS L + Q+++F PP GV KI
Sbjct: 867 ILVFLPGLAEIKMLYEQLQSNSLFNNRRSYRCVVHPLHSSLSSEEQQAVFIKPPVGVTKI 926
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+++TNIAETSITIDD+VYV+D GK K +D + +L+ ++S ANA QR+GRAGR
Sbjct: 927 IISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGR 984
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 36/55 (65%)
Query: 30 DAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+A K+ K SR++Q +L+ R+ LP+++ R+ +L ++ +Q+ VISG TG G
Sbjct: 510 NAKICKQFQIKQTSRQFQSILQERQSLPAWEERETILKLLSKHQVLVISGMTGCG 564
>gi|525027588|ref|XP_005061220.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like
[Ficedula albicollis]
Length = 1309
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 81/118 (68%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLH-RSMCQSSFF--NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
IL+FLPG+D I SL R + F ++ R+Q+ LHS + T QK + +PP GVRKI
Sbjct: 511 ILIFLPGYDEIVSLRDRILFDDRRFADDAHRYQVFMLHSNMQTSDQKKVLKSPPPGVRKI 570
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+L+TNIAETSIT++D+V+V+D GK K +FD + LK WIS A+A QR+GRAGR
Sbjct: 571 ILSTNIAETSITVNDVVFVIDSGKVKEKSFDALSCVTMLKMVWISKASAIQRKGRAGR 628
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 25/37 (67%)
Query: 327 EGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSL 363
E V+ D+I LL +IC GAIL+FLPG+D I SL
Sbjct: 488 EKVDLDLIMHLLYNICHNCGTGAILIFLPGYDEIVSL 524
>gi|393240248|gb|EJD47775.1| P-loop containing nucleoside triphosphate hydrolase protein
[Auricularia delicata TFB-10046 SS5]
Length = 1322
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/122 (44%), Positives = 79/122 (64%), Gaps = 7/122 (5%)
Query: 189 ILVFLPGWDTINSLHRSMCQS-------SFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEG 241
+LVFLPGW+ I S+ R + SF + +++QI+ LHS +P Q+ +F P G
Sbjct: 703 VLVFLPGWEEIQSVQRILSDPMKPLLDISFLDRTKYQILILHSSIPVAEQQQVFEPPSPG 762
Query: 242 VRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRA 301
VR+I+L+TNIAETS+TI D+VYVVD + K F+ + +I++L W+ +N QR GRA
Sbjct: 763 VRRIILSTNIAETSVTIPDVVYVVDAARVKELRFEPERHISSLVSAWVGASNLNQRAGRA 822
Query: 302 GR 303
GR
Sbjct: 823 GR 824
>gi|47222106|emb|CAG12132.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1807
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/119 (49%), Positives = 79/119 (66%), Gaps = 4/119 (3%)
Query: 189 ILVFLPGWDTINSLHRS-MCQSSFFN--SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
+LVFLPG I L+ MC F N + R + PLHS L Q+++F PPEGV KI
Sbjct: 350 VLVFLPGLAEIKMLYEQLMCNRIFNNRGTKRCAVYPLHSSLSNEEQQAVFGRPPEGVTKI 409
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMS-NFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+++TNIAETS+TIDD+VYV+D GK K +D ++ +L+ W+S ANA QR+GRAGR
Sbjct: 410 IISTNIAETSVTIDDVVYVIDSGKMKEKRQYDASKSMESLEDTWVSRANALQRKGRAGR 468
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 30/42 (71%)
Query: 43 SRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
SRR+ MLE R+KLP++Q R+ +L + +Q+ V+SG TG G
Sbjct: 3 SRRFASMLEQRRKLPAWQERENILGALEQSQVLVVSGMTGCG 44
>gi|521585279|gb|EPQ28968.1| hypothetical protein PFL1_03258 [Pseudozyma flocculosa PF-1]
Length = 1723
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 75/114 (65%)
Query: 190 LVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLAT 249
L+FLPG I H + F S F++ PLHS + + +Q ++FN PP+GVRKIV+AT
Sbjct: 1192 LIFLPGLADIRKCHDMLNDHPIFGGSTFRLYPLHSTISSENQGAVFNVPPKGVRKIVIAT 1251
Query: 250 NIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
NIAET ITI DI V+D GK + FD K I+ L +++ +NAKQRRGRAGR
Sbjct: 1252 NIAETGITIPDITCVIDSGKHREMRFDEKRQISRLVECFVAKSNAKQRRGRAGR 1305
Score = 45.8 bits (107), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 32/46 (69%)
Query: 39 RKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+++ S+ YQ ML R+ LP + R +LD+V ++QI V+SGETG G
Sbjct: 860 QRVASKPYQAMLPGRQGLPIAKYRQEILDIVESSQIFVLSGETGCG 905
>gi|402890624|ref|XP_003908583.1| PREDICTED: putative ATP-dependent RNA helicase DHX57 [Papio anubis]
Length = 1387
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 80/118 (67%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN---SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVFLPG I L+ + +S FN S+R I PLHS L + Q+++F PP GV KI
Sbjct: 851 ILVFLPGLAEIKMLYEQLQCNSLFNNRRSNRCVIHPLHSSLSSEEQQAVFVKPPVGVTKI 910
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+++TNIAETSITIDD+VYV+D GK K +D + +L+ ++S ANA QR+GRAGR
Sbjct: 911 IISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGR 968
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 36/50 (72%)
Query: 35 KEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
K+ K SR++Q +L+ R+ LP+++ R+ +L+++R +Q+ VISG TG G
Sbjct: 524 KQFRMKQASRQFQSILQERQSLPAWEERETILNLLRKHQVVVISGMTGCG 573
>gi|517313535|emb|CCT65731.1| related to helicases [Fusarium fujikuroi IMI 58289]
Length = 1349
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 78/115 (67%), Gaps = 5/115 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL+FLPG IN R++ NS ++PLH+ L T QK +F+ P G RK+V+A
Sbjct: 842 ILIFLPGVGEINQACRAL---KAINS--LHVLPLHASLETREQKRVFSGAPPGKRKVVVA 896
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TN+AETSITIDDIV V+D GK K ++FDV++N+ L+ W S A KQRRGRAGR
Sbjct: 897 TNVAETSITIDDIVVVIDSGKVKETSFDVQNNMRKLEETWASRAACKQRRGRAGR 951
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 41/57 (71%)
Query: 28 VLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+ D +++ +R+ +S + M+ R+ LP++QMR+A++ VR+N +T+ISGETGSG
Sbjct: 553 IKDEKSREQWLRRQESSSLKNMVSKRQGLPAWQMREAIIGTVRSNHVTIISGETGSG 609
>gi|321265267|ref|XP_003197350.1| DEAH RNA helicase [Cryptococcus gattii WM276]
gi|317463829|gb|ADV25563.1| DEAH RNA helicase, putative [Cryptococcus gattii WM276]
Length = 1571
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 76/122 (62%), Gaps = 7/122 (5%)
Query: 189 ILVFLPGWDTINSL-------HRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEG 241
+LVFLPGW+ I + + F + RF I LHS +P QK +F TPP G
Sbjct: 918 VLVFLPGWEEIKKVADILLTGRYPLLGMDFRDPRRFSIHYLHSTIPAAEQKEVFRTPPPG 977
Query: 242 VRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRA 301
VR+I+LATNIAETS+TI D+VYVVD G+ K +D + ++++L W+ +N QR GRA
Sbjct: 978 VRRIILATNIAETSVTIPDVVYVVDTGRVKEKRYDPERHMSSLVSAWVGSSNLNQRAGRA 1037
Query: 302 GR 303
GR
Sbjct: 1038 GR 1039
>gi|355751263|gb|EHH55518.1| hypothetical protein EGM_04740 [Macaca fascicularis]
Length = 1387
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 80/118 (67%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN---SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVFLPG I L+ + +S FN S+R I PLHS L + Q+++F PP GV KI
Sbjct: 851 ILVFLPGLAEIKMLYEQLQCNSLFNNRRSNRCVIHPLHSSLSSEEQQAVFVKPPVGVTKI 910
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+++TNIAETSITIDD+VYV+D GK K +D + +L+ ++S ANA QR+GRAGR
Sbjct: 911 IISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGR 968
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 36/50 (72%)
Query: 35 KEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
K+ K SR++Q +L+ R+ LP+++ R+ +L+++R +Q+ VISG TG G
Sbjct: 524 KQFRMKQASRQFQSILQERQSLPAWEERETILNLLRKHQVVVISGMTGCG 573
>gi|500260295|gb|EOO02984.1| putative pre-mrna-splicing factor atp-dependent rna helicase prp22
protein [Togninia minima UCRPA7]
Length = 1309
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/115 (50%), Positives = 78/115 (67%), Gaps = 5/115 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL+FLPG IN + C F +S ++PLH+ L T Q+ +F PP G RK+V+A
Sbjct: 884 ILIFLPGVAEINQI----CNLLRFANS-LHVLPLHASLETKEQRKVFAAPPPGKRKVVVA 938
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TN+AETSITIDDIV V+D G+ K +++D ++N+ L+ W SLA KQRRGRAGR
Sbjct: 939 TNVAETSITIDDIVAVIDSGRVKETSYDTQNNMRRLEETWASLAACKQRRGRAGR 993
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 78/344 (22%), Positives = 138/344 (40%), Gaps = 42/344 (12%)
Query: 28 VLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPL 87
+D K E + + ++ Y++ML R++LP++Q+R+ V+ V +NQIT+ISGETGSG
Sbjct: 588 AVDVKSKDEWLARQETASYKKMLAQRQRLPAWQVREDVVQTVTDNQITIISGETGSGKST 647
Query: 88 HLDFITLKRSETQQYPNDVLNMLKDPELEGVNNDVIFSL-LQHICTTQRPGAILVYCTYT 146
L Q Y N ++ P I +L L + +R + Y+
Sbjct: 648 QSVQFVLDDLYQQGYGNCANIIVTQPRR-------ISALGLADRVSDERCSQVGQEVGYS 700
Query: 147 FMGVSPMK-----VFFCKNVLQRLMKGVGANSPKRWVKLLRSMLVVPILVFLPGWDTINS 201
G + F VL R ++ G L VV V DT
Sbjct: 701 IRGENKTSGKTKITFVTTGVLLRRLQTSGGRIDDVVASLADVSHVVIDEVHERSLDTDFL 760
Query: 202 LHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLATNIAETS-ITIDD 260
L S+ + ++I + + L + + F V + +A +DD
Sbjct: 761 L--SILRDVLLKRKDLKLILMSATLDSATFADYFKADGLSVGLVEIAGRTYPVEDFYLDD 818
Query: 261 IVYVVDCGKTKMSNFDV-KDNIATLKPEWISLANAKQRRGRAGRTLKRSETQQYPNDVLN 319
I+ +++NF++ +D+ + S + + RT++R + N +++
Sbjct: 819 II--------RITNFNLGRDDFTDSR----SADQKGEYQDPVARTIQRLGMRINYNLLVD 866
Query: 320 MLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSL 363
K +L + + TQ+ G IL+FLPG IN +
Sbjct: 867 TTK-------------ALDEELSDTQKSGGILIFLPGVAEINQI 897
>gi|338713357|ref|XP_001918336.2| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
YTHDC2 [Equus caballus]
Length = 1434
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 79/118 (66%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLH-RSMCQSSFFNSS--RFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
IL+FLPG+D I L R + F S R+Q+ LHS + T QK + PP GVRKI
Sbjct: 630 ILIFLPGYDEIVGLRDRILFDDKRFADSTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKI 689
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+L+TNIAETSIT++D+V+V+D GK K +FD + + LK WIS A+A QR+GRAGR
Sbjct: 690 ILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGR 747
>gi|224000748|ref|XP_002290046.1| hypothetical protein THAPSDRAFT_268812 [Thalassiosira pseudonana
CCMP1335]
gi|220973468|gb|EED91798.1| hypothetical protein THAPSDRAFT_268812 [Thalassiosira pseudonana
CCMP1335]
Length = 791
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/213 (37%), Positives = 103/213 (48%), Gaps = 54/213 (25%)
Query: 95 KRSETQQYPN---DVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVYCTYTFMGVS 151
K S + YPN V+N L + VN ++I LL++ICT+ GA
Sbjct: 228 KTSLRRMYPNYSKSVINSLSVVDESIVNYELIGELLKYICTSLEDGA------------- 274
Query: 152 PMKVFFCKNVLQRLMKGVGANSPKRWVKLLRSMLVVPILVFLPGWDTINSLHRSMCQSSF 211
IL FLPG I + + + +
Sbjct: 275 -------------------------------------ILCFLPGMKEITTAMEGLMKLEY 297
Query: 212 FNSSRFQII-PLHSMLPTVSQKSIFNTPPEGVRKIVLATNIAETSITIDDIVYVVDCGKT 270
F S II PLHS L QK+IF+ P G RKIVL+TNIAETSITIDD+V+VVD G+
Sbjct: 298 FQDSSNAIIYPLHSSLSNEEQKAIFSRPLAGKRKIVLSTNIAETSITIDDVVFVVDAGRV 357
Query: 271 KMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
K + +D + + TL W+S A+AKQRRGRAGR
Sbjct: 358 KENRYDDLNRMPTLMECWVSKASAKQRRGRAGR 390
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 35/51 (68%), Gaps = 5/51 (9%)
Query: 49 MLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG-----PPLHLDFITL 94
ML R KLP+Y+M+D VL+ +R NQ+TVISG+TG G P L LD + L
Sbjct: 1 MLSQRIKLPAYKMKDKVLETIRANQVTVISGDTGCGKTTQVPQLVLDDLIL 51
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Query: 292 ANAKQRRGRAGRTLKRSETQQYPN---DVLNMLKDPELEGVNNDVIFSLLQHICTTQRPG 348
A K+ G K S + YPN V+N L + VN ++I LL++ICT+ G
Sbjct: 214 AKKKKPGDNTGSLSKTSLRRMYPNYSKSVINSLSVVDESIVNYELIGELLKYICTSLEDG 273
Query: 349 AILVFLPGWDTINSLHRSMCQSSFF 373
AIL FLPG I + + + +F
Sbjct: 274 AILCFLPGMKEITTAMEGLMKLEYF 298
>gi|499027983|ref|XP_004564722.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like isoform
X2 [Maylandia zebra]
Length = 1391
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/118 (51%), Positives = 79/118 (66%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLH-RSMCQSSFFN--SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
IL+FLPG+D I L R + F+ S R+ + LHS + T QK T P GVRKI
Sbjct: 610 ILIFLPGYDEIVELRDRILHDDKRFSGQSERYHVFTLHSDMQTQDQKKALKTSPPGVRKI 669
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+L+TNIAETSITI+D+V+V+D GK K +FD N++ LK WIS A+A QR+GRAGR
Sbjct: 670 ILSTNIAETSITINDVVFVIDSGKVKEKSFDTLSNVSMLKTVWISKASALQRKGRAGR 727
>gi|302909139|ref|XP_003050007.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256730944|gb|EEU44294.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 1349
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/115 (51%), Positives = 76/115 (66%), Gaps = 5/115 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL+FLPG IN R++ S ++PLH+ L T QK +F P G RK+V+A
Sbjct: 842 ILIFLPGVGEINQSCRALKAIS-----SLHVLPLHASLETREQKRVFTNAPHGKRKVVVA 896
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TN+AETSITIDDIV V+D GK K ++FDV++N+ L+ W S A KQRRGRAGR
Sbjct: 897 TNVAETSITIDDIVVVIDSGKVKETSFDVQNNMRKLEETWASRAACKQRRGRAGR 951
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 44/57 (77%)
Query: 28 VLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
V D +++ +R+ +S +++ML R++LP+++MR+A++ V++N +T+ISGETGSG
Sbjct: 553 VKDERNREQWLRRQESSSWKDMLSKRQRLPAWKMREAIIGTVKSNHVTIISGETGSG 609
>gi|499027981|ref|XP_004564721.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like isoform
X1 [Maylandia zebra]
Length = 1392
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/118 (51%), Positives = 79/118 (66%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLH-RSMCQSSFFN--SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
IL+FLPG+D I L R + F+ S R+ + LHS + T QK T P GVRKI
Sbjct: 610 ILIFLPGYDEIVELRDRILHDDKRFSGQSERYHVFTLHSDMQTQDQKKALKTSPPGVRKI 669
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+L+TNIAETSITI+D+V+V+D GK K +FD N++ LK WIS A+A QR+GRAGR
Sbjct: 670 ILSTNIAETSITINDVVFVIDSGKVKEKSFDTLSNVSMLKTVWISKASALQRKGRAGR 727
>gi|431912748|gb|ELK14766.1| Putative ATP-dependent RNA helicase DHX57 [Pteropus alecto]
Length = 1382
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/118 (50%), Positives = 79/118 (66%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN---SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVFLPG I L+ + +S FN S R + PLHS L + Q+++F PP GV KI
Sbjct: 846 ILVFLPGLAEIKMLYEQLQSNSLFNNRRSYRCVVHPLHSSLSSEEQQAVFVKPPIGVTKI 905
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+++TNIAETSITIDD+VYV+D GK K +D + +L+ ++S ANA QR+GRAGR
Sbjct: 906 IISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGR 963
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 36/55 (65%)
Query: 30 DAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+A K+ K SR++Q +L+ R+ LP+++ R+ +L ++ +Q+ VISG TG G
Sbjct: 514 NAKICKQFQIKQASRQFQSILQERQSLPAWEERETILKLLSKHQVLVISGMTGCG 568
>gi|355565624|gb|EHH22053.1| hypothetical protein EGK_05242 [Macaca mulatta]
Length = 1466
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 80/118 (67%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN---SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVFLPG I L+ + +S FN S+R I PLHS L + Q+++F PP GV KI
Sbjct: 851 ILVFLPGLAEIKMLYEQLQCNSLFNNRRSNRCVIHPLHSSLSSEEQQAVFVKPPVGVTKI 910
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+++TNIAETSITIDD+VYV+D GK K +D + +L+ ++S ANA QR+GRAGR
Sbjct: 911 IISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGR 968
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 36/50 (72%)
Query: 35 KEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
K+ K SR++Q +L+ R+ LP+++ R+ +L+++R +Q+ VISG TG G
Sbjct: 524 KQFRMKQASRQFQSILQERQSLPAWEERETILNLLRKHQVVVISGMTGCG 573
>gi|474074400|gb|EMS54496.1| putative ATP-dependent RNA helicase DHX36 [Triticum urartu]
Length = 1064
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/139 (42%), Positives = 83/139 (59%), Gaps = 1/139 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNS-SRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
+LVF+ GWD I+SL + +R ++ H + T Q+ IF+ P VRK+VL
Sbjct: 417 VLVFMTGWDDISSLKDQLKAHPLLGDPNRVLLLACHGSMATSEQRLIFDKAPPNVRKVVL 476
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKR 307
ATN+AE SITI+DIV+V+DCGK K + +D +N L P WIS A+++QRRGRAGR
Sbjct: 477 ATNMAEASITINDIVFVMDCGKAKETTYDALNNTPCLLPSWISKASSRQRRGRAGRVQPG 536
Query: 308 SETQQYPNDVLNMLKDPEL 326
YP V + + +L
Sbjct: 537 ECYHLYPRCVYDAFAEYQL 555
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 45/76 (59%), Gaps = 12/76 (15%)
Query: 26 DPVLDAAFKKEMIRK--LQSRRYQ----------EMLEARKKLPSYQMRDAVLDMVRNNQ 73
DP+LD + ++++++ L+ R +Q +M+E RK LP+Y+ ++ +L + NQ
Sbjct: 190 DPLLDESVMEKILQRKSLRMRNFQRSWQESPEGAKMVEFRKSLPAYKEKERLLAAIARNQ 249
Query: 74 ITVISGETGSGPPLHL 89
+ VISGETG G L
Sbjct: 250 VIVISGETGCGKTTQL 265
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 36/60 (60%)
Query: 304 TLKRSETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSL 363
L+ S + Y + + L + + + ++I ++L HIC +R GA+LVF+ GWD I+SL
Sbjct: 371 ALQNSNFETYGSRTRDSLANWNPDCIGFNLIEAVLCHICRKERAGAVLVFMTGWDDISSL 430
>gi|392342510|ref|XP_003754609.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2 [Rattus
norvegicus]
Length = 1434
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/117 (50%), Positives = 79/117 (67%), Gaps = 3/117 (2%)
Query: 190 LVFLPGWDTINSLH-RSMCQSSFF--NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIV 246
L+FLPG+D I L R + F N+ R+Q+ LHS + T QK + PP GVRKI+
Sbjct: 630 LIFLPGYDEIVGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKII 689
Query: 247 LATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
L+TNIAETSIT++D+V+V+D GK K +FD + + LK WIS A+A QR+GRAGR
Sbjct: 690 LSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGR 746
>gi|195353782|ref|XP_002043382.1| GM16493 [Drosophila sechellia]
gi|194127505|gb|EDW49548.1| GM16493 [Drosophila sechellia]
Length = 1298
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/116 (48%), Positives = 81/116 (69%), Gaps = 1/116 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFLPGW+ I +L + + ++ F ++S+++I+P HS +P Q+ +F PEGV KI+L
Sbjct: 656 ILVFLPGWNLIFALMKFLQNTNIFGDTSQYRILPCHSQIPRDDQRKVFEPVPEGVTKIIL 715
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+TNIAETSITIDDIV+V+D K +M F +N+ + W S N +QR+GRAGR
Sbjct: 716 STNIAETSITIDDIVFVIDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGR 771
Score = 42.0 bits (97), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 4/53 (7%)
Query: 331 NDVIFSLLQ----HICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNSCLLY 379
+DV F LL+ HI + PGAILVFLPGW+ I +L + + ++ F Y
Sbjct: 633 SDVSFELLEALLLHIKSKNIPGAILVFLPGWNLIFALMKFLQNTNIFGDTSQY 685
Score = 39.7 bits (91), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 25/46 (54%)
Query: 39 RKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
R+ Y++ LE R KLP MR +L + +N + +I G TG G
Sbjct: 367 RRQNDNEYRQFLEFRDKLPIAAMRSEILTAINDNPVVIIRGNTGCG 412
>gi|157382894|gb|ABV48882.1| maleless [Drosophila simulans]
Length = 1298
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/116 (48%), Positives = 81/116 (69%), Gaps = 1/116 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFLPGW+ I +L + + ++ F ++S+++I+P HS +P Q+ +F PEGV KI+L
Sbjct: 656 ILVFLPGWNLIFALMKFLQNTNIFGDTSQYRILPCHSQIPRDDQRKVFEPVPEGVTKIIL 715
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+TNIAETSITIDDIV+V+D K +M F +N+ + W S N +QR+GRAGR
Sbjct: 716 STNIAETSITIDDIVFVIDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGR 771
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 312 QYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSS 371
Q + + ML + + V+ +++ +LL HI + PGAILVFLPGW+ I +L + + ++
Sbjct: 621 QKTRNAMAMLSESD---VSFELLEALLMHIKSKNIPGAILVFLPGWNLIFALMKFLQNTN 677
Query: 372 FFNSCLLY 379
F Y
Sbjct: 678 IFGDTSQY 685
Score = 39.7 bits (91), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 25/46 (54%)
Query: 39 RKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
R+ Y++ LE R KLP MR +L + +N + +I G TG G
Sbjct: 367 RRQNDNEYRQFLEFRDKLPIAAMRSEILTAINDNPVVIIRGNTGCG 412
>gi|499027985|ref|XP_004564723.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like isoform
X3 [Maylandia zebra]
Length = 1387
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/118 (51%), Positives = 79/118 (66%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLH-RSMCQSSFFN--SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
IL+FLPG+D I L R + F+ S R+ + LHS + T QK T P GVRKI
Sbjct: 610 ILIFLPGYDEIVELRDRILHDDKRFSGQSERYHVFTLHSDMQTQDQKKALKTSPPGVRKI 669
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+L+TNIAETSITI+D+V+V+D GK K +FD N++ LK WIS A+A QR+GRAGR
Sbjct: 670 ILSTNIAETSITINDVVFVIDSGKVKEKSFDTLSNVSMLKTVWISKASALQRKGRAGR 727
>gi|157382892|gb|ABV48881.1| maleless [Drosophila simulans]
Length = 1298
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/116 (48%), Positives = 81/116 (69%), Gaps = 1/116 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFLPGW+ I +L + + ++ F ++S+++I+P HS +P Q+ +F PEGV KI+L
Sbjct: 656 ILVFLPGWNLIFALMKFLQNTNIFGDTSQYRILPCHSQIPRDDQRKVFEPVPEGVTKIIL 715
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+TNIAETSITIDDIV+V+D K +M F +N+ + W S N +QR+GRAGR
Sbjct: 716 STNIAETSITIDDIVFVIDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGR 771
Score = 42.7 bits (99), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 312 QYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSS 371
Q + + ML + + V+ +++ +LL HI + PGAILVFLPGW+ I +L + + ++
Sbjct: 621 QKTRNAMAMLSESD---VSFELLEALLMHIKSKNIPGAILVFLPGWNLIFALMKFLQNTN 677
Query: 372 FFNSCLLY 379
F Y
Sbjct: 678 IFGDTSQY 685
Score = 39.3 bits (90), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 25/46 (54%)
Query: 39 RKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
R+ Y++ LE R KLP MR +L + +N + +I G TG G
Sbjct: 367 RRQNDTEYRQFLEFRDKLPIAAMRSEILTAINDNPVVIIRGNTGCG 412
>gi|157382890|gb|ABV48880.1| maleless [Drosophila simulans]
Length = 1298
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/116 (48%), Positives = 81/116 (69%), Gaps = 1/116 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFLPGW+ I +L + + ++ F ++S+++I+P HS +P Q+ +F PEGV KI+L
Sbjct: 656 ILVFLPGWNLIFALMKFLQNTNIFGDTSQYRILPCHSQIPRDDQRKVFEPVPEGVTKIIL 715
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+TNIAETSITIDDIV+V+D K +M F +N+ + W S N +QR+GRAGR
Sbjct: 716 STNIAETSITIDDIVFVIDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGR 771
Score = 42.7 bits (99), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 312 QYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSS 371
Q + + ML + + V+ +++ +LL HI + PGAILVFLPGW+ I +L + + ++
Sbjct: 621 QKTRNAMAMLSESD---VSFELLEALLMHIKSKNIPGAILVFLPGWNLIFALMKFLQNTN 677
Query: 372 FFNSCLLY 379
F Y
Sbjct: 678 IFGDTSQY 685
Score = 39.3 bits (90), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 25/46 (54%)
Query: 39 RKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
R+ Y++ LE R KLP MR +L + +N + +I G TG G
Sbjct: 367 RRQNDTEYRQFLEFRDKLPIAAMRSEILTAINDNPVVIIRGNTGCG 412
>gi|344288805|ref|XP_003416137.1| PREDICTED: putative ATP-dependent RNA helicase DHX57 [Loxodonta
africana]
Length = 1386
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/118 (50%), Positives = 79/118 (66%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN---SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVFLPG I L+ + + FN S+R I PLHS L + Q+++F PP GV KI
Sbjct: 850 ILVFLPGLAEIKMLYEQLQSNPLFNNRRSNRCVIHPLHSSLSSEEQQAVFVKPPVGVTKI 909
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+++TNIAETSITIDD+VYV+D GK K +D + +L+ ++S ANA QR+GRAGR
Sbjct: 910 IISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGR 967
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 37/55 (67%)
Query: 30 DAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+A +K+ K SR++Q +L+ R+ LP+++ R+ +L ++ +Q+ VISG TG G
Sbjct: 518 NAKIRKQFRIKQASRQFQSILQERQSLPAWEERETILKLLSKHQVLVISGMTGCG 572
>gi|332221479|ref|XP_003259888.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2 [Nomascus
leucogenys]
Length = 1430
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/118 (49%), Positives = 80/118 (67%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLH-RSMCQSSFF--NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
+L+F+PG+D I L R + F N+ R+Q+ LHS + T QK + PP GVRKI
Sbjct: 625 VLIFVPGYDEIVGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKI 684
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+L+TNIAETSIT++D+V+V+D GK K +FD + + LK WIS A+A QR+GRAGR
Sbjct: 685 ILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGR 742
>gi|157123425|ref|XP_001653827.1| ATP-dependent RNA helicase [Aedes aegypti]
gi|108882920|gb|EAT47145.1| AAEL001719-PA [Aedes aegypti]
Length = 1052
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 80/115 (69%), Gaps = 2/115 (1%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLP I +H+ + + I PLHS +P + QK++F+ P G RK++LA
Sbjct: 529 ILVFLPSLAQITEVHKLLTSHRRLSQMSTLIYPLHSKVPQLDQKAVFSRPRPGTRKVILA 588
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITIDD+VYV++ G+ K++ ++ D I++L+ EWIS++N QR+GRAGR
Sbjct: 589 TNIAETSITIDDVVYVINAGRHKINMYE--DGISSLRDEWISISNEIQRKGRAGR 641
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 29/54 (53%)
Query: 312 QYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHR 365
Y VL + P+ E ND+I L+ HI ++ GAILVFLP I +H+
Sbjct: 491 HYSAQVLRTISSPQSETCQNDLIVELICHITYSKPEGAILVFLPSLAQITEVHK 544
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 8/60 (13%)
Query: 25 NDPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
ND + KKE + EM R+KLP++ + +L+M+ +Q+ ++ GETGSG
Sbjct: 233 NDRFYEECLKKEYL--------GEMKSFREKLPAFGSKQNILEMIDAHQVILVKGETGSG 284
>gi|348504281|ref|XP_003439690.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like
[Oreochromis niloticus]
Length = 1393
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 79/118 (66%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLH-RSMCQSSFFN--SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
+L+FLPG+D I L R + F+ S R+ + LHS + T QK T P GVRKI
Sbjct: 606 VLIFLPGYDEIVELRDRILHDDKRFSGQSERYHVFTLHSDMQTQDQKKALKTSPPGVRKI 665
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+L+TNIAETSITI+D+V+V+D GK K +FD N++ LK WIS A+A QR+GRAGR
Sbjct: 666 ILSTNIAETSITINDVVFVIDSGKVKEKSFDTLSNVSMLKTVWISKASALQRKGRAGR 723
>gi|358335935|dbj|GAA54529.1| ATP-dependent RNA helicase A [Clonorchis sinensis]
Length = 1353
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 77/115 (66%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPGW+ I+ L + + F + + I+PLHS +P Q+ +F +PP GV KIVL+
Sbjct: 709 VLVFLPGWNIISMLRKFLQAHPRFGGNDYLILPLHSQVPREDQRLVFRSPPPGVTKIVLS 768
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+D+V+V+D +M F ++N+ + W S N +QRRGRAGR
Sbjct: 769 TNIAETSITINDVVFVIDLCLVRMKLFTARNNMTSYSTSWASKTNLEQRRGRAGR 823
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 29 LDAAFKKEMIRKLQSR-RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+ A F E +R+ + + +L+ R +LP + R +++D + ++++T+I GETG G
Sbjct: 413 MSARFADERLRRFDNEPNLRSLLDDRAQLPVHSYRHSIMDAITHSRVTLIRGETGCG 469
Score = 38.9 bits (89), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 31/53 (58%)
Query: 313 YPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHR 365
Y +V +++ + V D++ LL+ I PGA+LVFLPGW+ I+ L +
Sbjct: 672 YGPEVARSMREITEKEVPFDLVGCLLEQIAGMGIPGAVLVFLPGWNIISMLRK 724
>gi|313230916|emb|CBY18913.1| unnamed protein product [Oikopleura dioica]
Length = 1232
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 74/115 (64%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPGW +I+ L + + F ++I+PLHS +P Q +F P EGV K++L+
Sbjct: 571 VLVFLPGWASISGLMKHLHNHHIFGGPGYRILPLHSQIPREDQYQVFVRPSEGVVKVILS 630
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITIDD+ +V+D K KM F +N+ W S AN +QR+GRAGR
Sbjct: 631 TNIAETSITIDDVSFVIDSCKVKMKMFTSHNNMTNYATVWASQANIEQRKGRAGR 685
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 51 EARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHLDFITLKRS 97
E RK LP +Q R +LD + NN +T++ G TGSG L L+++
Sbjct: 351 ETRKNLPIFQARQQLLDTINNNTVTIVKGATGSGKTTQLPQYILEQA 397
>gi|323508118|emb|CBQ67989.1| probable DNA/RNA helicase (DEAD/H box family II) [Sporisorium
reilianum SRZ2]
Length = 1699
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/114 (49%), Positives = 74/114 (64%)
Query: 190 LVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLAT 249
L+F+PG I H + F + FQ+ PLHS + + +Q ++FN PP GVRKIV+AT
Sbjct: 1169 LIFMPGLAEIRKCHDMLVDHPVFGGAGFQLFPLHSTISSENQGAVFNVPPPGVRKIVIAT 1228
Query: 250 NIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
NIAET ITI DI V+D GK + +D K I+ L +I+ +NAKQRRGRAGR
Sbjct: 1229 NIAETGITIPDITCVIDSGKHREMRYDEKRQISRLVECFIAKSNAKQRRGRAGR 1282
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 30/45 (66%)
Query: 40 KLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
++ S YQ+ML R+ LP R +LD+V NNQI V+SGETG G
Sbjct: 838 RVASPSYQKMLPGRQGLPIANHRQEILDLVENNQIFVLSGETGCG 882
>gi|402872279|ref|XP_003900050.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2 [Papio
anubis]
Length = 1365
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/118 (50%), Positives = 79/118 (66%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLH-RSMCQSSFFNSS--RFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
+L+FLPG+D I L R + F S R+Q+ LHS + T QK + PP GVRKI
Sbjct: 625 VLIFLPGYDEIVGLRDRILFDDKRFADSTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKI 684
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+L+TNIAETSIT++D+V+V+D GK K +FD + + LK WIS A+A QR+GRAGR
Sbjct: 685 ILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGR 742
>gi|269847874|ref|NP_073739.3| probable ATP-dependent RNA helicase YTHDC2 [Homo sapiens]
gi|239938805|sp|Q9H6S0.2|YTDC2_HUMAN RecName: Full=Probable ATP-dependent RNA helicase YTHDC2
gi|187950589|gb|AAI37286.1| YTH domain containing 2 [Homo sapiens]
Length = 1430
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/118 (50%), Positives = 79/118 (66%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLH-RSMCQSSFFNSS--RFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
+L+FLPG+D I L R + F S R+Q+ LHS + T QK + PP GVRKI
Sbjct: 625 VLIFLPGYDEIVGLRDRILFDDKRFADSTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKI 684
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+L+TNIAETSIT++D+V+V+D GK K +FD + + LK WIS A+A QR+GRAGR
Sbjct: 685 ILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGR 742
>gi|327277433|ref|XP_003223469.1| PREDICTED: ATP-dependent RNA helicase A-like [Anolis carolinensis]
Length = 1253
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 51/115 (44%), Positives = 78/115 (67%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPGW+ I ++ + + + F + R++I+PLHS +P Q+ +F+ P G+ K++L+
Sbjct: 647 VLVFLPGWNLIYTMQKYLEMNPHFGNQRYRILPLHSQIPREEQRKVFDPVPPGMTKVILS 706
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+D+VYV+D K K+ F +N+ W S N +QR+GRAGR
Sbjct: 707 TNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGR 761
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 30/44 (68%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
++I +LL++I T PGA+LVFLPGW+ I ++ + + + F +
Sbjct: 629 ELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKYLEMNPHFGN 672
>gi|327276569|ref|XP_003223042.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like [Anolis
carolinensis]
Length = 1440
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/118 (50%), Positives = 80/118 (67%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLH-RSMCQSSFF--NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
+L+FLPG+D I L R + F N+ RFQ+ LHS + T QK + T P G+RKI
Sbjct: 628 VLIFLPGYDEIVGLRDRILFDDKRFADNAHRFQVFMLHSNMQTSDQKKVLKTSPPGIRKI 687
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+L+TNIAETSIT++D+V+V+D GK K +FD + + LK WIS A+A QR+GRAGR
Sbjct: 688 ILSTNIAETSITVNDVVFVIDSGKMKEKSFDALNCVTMLKMVWISKASAIQRKGRAGR 745
>gi|255546785|ref|XP_002514451.1| ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223546447|gb|EEF47947.1| ATP-dependent RNA helicase, putative [Ricinus communis]
Length = 1129
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/139 (43%), Positives = 80/139 (57%), Gaps = 1/139 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNS-SRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
+LVF+ GW+ I+ L + +R ++ H + T QK IF PP VRKIVL
Sbjct: 514 VLVFMTGWEDISCLRDQLKAHPLLGDPNRVLLLTCHGSMATSEQKLIFERPPSNVRKIVL 573
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKR 307
ATN+AE SITI+D+V+VVDCGK K + +D +N L P WIS A+A QRRGRAGR
Sbjct: 574 ATNMAEASITINDMVFVVDCGKAKETTYDALNNTPCLLPSWISQASACQRRGRAGRVQPG 633
Query: 308 SETQQYPNDVLNMLKDPEL 326
YP V + +L
Sbjct: 634 ECYHLYPKCVYEAFAEYQL 652
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 27/40 (67%), Gaps = 2/40 (5%)
Query: 324 PELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSL 363
P+ G N +I ++L HIC +RPG +LVF+ GW+ I+ L
Sbjct: 490 PDCIGFN--LIEAVLCHICRKERPGGVLVFMTGWEDISCL 527
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 43/79 (54%), Gaps = 7/79 (8%)
Query: 18 ETRQKLLNDPVLDAAFKKEMIR-KLQSRRYQE------MLEARKKLPSYQMRDAVLDMVR 70
E + L+ V++ ++ +R + R +QE +++ RK LP+++ ++ +L +
Sbjct: 187 ENPESFLDGSVMEKILQRRSLRMRNMQRAWQESPEGRKIMDFRKSLPAFKEKEKLLQAIA 246
Query: 71 NNQITVISGETGSGPPLHL 89
NQ+ V+SGETG G L
Sbjct: 247 RNQVIVVSGETGCGKTTQL 265
>gi|429852559|gb|ELA27691.1| DEAD/DEAH box [Colletotrichum gloeosporioides Nara gc5]
Length = 1324
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/115 (53%), Positives = 76/115 (66%), Gaps = 5/115 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPG IN C++ NSS ++PLH+ L T QK +F PP G RK+V+A
Sbjct: 820 ILVFLPGVAEINQ----TCRALQSNSS-LHVLPLHASLETKEQKRVFAAPPGGKRKVVVA 874
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TN+AETSITIDDIV V+D GK K + +D +N+ L+ W S A KQRRGRAGR
Sbjct: 875 TNVAETSITIDDIVAVIDSGKVKETTYDPVNNMRKLEENWASQAACKQRRGRAGR 929
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 39/55 (70%)
Query: 30 DAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
D ++E +++ + +Q+M+ RK LP++Q+++ ++ +V N +T+ISGETGSG
Sbjct: 533 DPRTREEWLKRQEDPSWQKMISKRKTLPAWQVQEDIVRIVDENHVTIISGETGSG 587
>gi|392579417|gb|EIW72544.1| hypothetical protein TREMEDRAFT_70747 [Tremella mesenterica DSM
1558]
Length = 1252
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 76/122 (62%), Gaps = 7/122 (5%)
Query: 189 ILVFLPGWDTINSLHRSMCQSS-------FFNSSRFQIIPLHSMLPTVSQKSIFNTPPEG 241
+LVFLPGW I + + S F +SS++ I LHS +P QK +F PPEG
Sbjct: 636 VLVFLPGWLEIKKVSDILLNGSNSLLGLRFSDSSKYSIHYLHSSIPAAEQKEVFRPPPEG 695
Query: 242 VRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRA 301
VR+I+LATNIAETS+TI D+VYVVD + K +D ++++L W+ +N QR GRA
Sbjct: 696 VRRIILATNIAETSVTIPDVVYVVDTARVKEKRYDPHSHMSSLVSAWVGQSNLNQRAGRA 755
Query: 302 GR 303
GR
Sbjct: 756 GR 757
>gi|296224041|ref|XP_002757877.1| PREDICTED: putative ATP-dependent RNA helicase DHX57 [Callithrix
jacchus]
Length = 1387
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 79/118 (66%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN---SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVFLPG I L+ + +S FN S+R I PLHS L + Q+++F P GV KI
Sbjct: 851 ILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLHSSLSSEEQQAVFMKHPVGVTKI 910
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+++TNIAETSITIDD+VYV+D GK K +D + +L+ ++S ANA QRRGRAGR
Sbjct: 911 IISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRRGRAGR 968
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 36/50 (72%)
Query: 35 KEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
K+ K SR++Q +L+ R+ LP+++ R+ +L+++R +Q+ VISG TG G
Sbjct: 524 KQFRMKQASRQFQSILQERQSLPAWEERETILNLLRRHQVVVISGMTGCG 573
>gi|354488941|ref|XP_003506624.1| PREDICTED: putative ATP-dependent RNA helicase DHX57 [Cricetulus
griseus]
Length = 1331
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/118 (50%), Positives = 79/118 (66%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN---SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVFLPG I L+ + +S FN S R I PLHS L + Q+++F PP GV KI
Sbjct: 795 ILVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVIHPLHSSLSSEEQQAVFVKPPVGVTKI 854
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+++TNIAE+SITIDD+VYV+D GK K +D + +L+ ++S ANA QR+GRAGR
Sbjct: 855 IISTNIAESSITIDDVVYVIDSGKMKEKRYDAGKGMESLEDTFVSQANALQRKGRAGR 912
Score = 42.4 bits (98), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 31/45 (68%)
Query: 40 KLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
K SR++ +L+ R+ LP+++ R+ +L ++ +Q+ VISG TG G
Sbjct: 473 KQASRQFYSILQERQSLPAWEERETILKLLSKHQVVVISGMTGCG 517
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 325 ELEGVNNDVIFSLLQHICTTQR---PGAILVFLPGWDTINSLHRSMCQSSFFNS 375
+ E VN D+I +LL+ I + PGAILVFLPG I L+ + +S FN+
Sbjct: 767 DFERVNFDLIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNN 820
>gi|475567082|gb|EMT15182.1| Putative ATP-dependent RNA helicase DHX36 [Aegilops tauschii]
Length = 950
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/139 (42%), Positives = 84/139 (60%), Gaps = 1/139 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
+LVF+ GWD I+SL + + +R ++ H + T Q+ IF+ P VRK+VL
Sbjct: 431 VLVFMTGWDDISSLKDQLKAHPLLGDPNRVLLLACHGSMATSEQRLIFDKAPPNVRKVVL 490
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKR 307
ATN+AE SITI+DIV+V+DCGK K + +D +N L P WIS A+++QRRGRAGR
Sbjct: 491 ATNMAEASITINDIVFVMDCGKAKETTYDALNNTPCLLPSWISKASSRQRRGRAGRVQPG 550
Query: 308 SETQQYPNDVLNMLKDPEL 326
YP V + + +L
Sbjct: 551 ECYHLYPRCVYDAFAEYQL 569
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 45/76 (59%), Gaps = 12/76 (15%)
Query: 26 DPVLDAAFKKEMIRK--LQSRRYQ----------EMLEARKKLPSYQMRDAVLDMVRNNQ 73
DP+LD + ++++++ L+ R +Q +M+E RK LP+Y+ ++ +L + NQ
Sbjct: 204 DPLLDESVMEKILQRKSLRMRNFQRSWQESPEGAKMVEFRKSLPAYKEKERLLAAIARNQ 263
Query: 74 ITVISGETGSGPPLHL 89
+ VISGETG G L
Sbjct: 264 VIVISGETGCGKTTQL 279
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 36/60 (60%)
Query: 304 TLKRSETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSL 363
L+ S + Y + + L + + + ++I ++L HIC +R GA+LVF+ GWD I+SL
Sbjct: 385 ALQNSNFETYGSRTRDSLANWNPDCIGFNLIEAVLCHICRKERAGAVLVFMTGWDDISSL 444
>gi|344237402|gb|EGV93505.1| Putative ATP-dependent RNA helicase DHX57 [Cricetulus griseus]
Length = 1115
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/118 (50%), Positives = 79/118 (66%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN---SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVFLPG I L+ + +S FN S R I PLHS L + Q+++F PP GV KI
Sbjct: 844 ILVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVIHPLHSSLSSEEQQAVFVKPPVGVTKI 903
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+++TNIAE+SITIDD+VYV+D GK K +D + +L+ ++S ANA QR+GRAGR
Sbjct: 904 IISTNIAESSITIDDVVYVIDSGKMKEKRYDAGKGMESLEDTFVSQANALQRKGRAGR 961
Score = 42.4 bits (98), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 31/45 (68%)
Query: 40 KLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
K SR++ +L+ R+ LP+++ R+ +L ++ +Q+ VISG TG G
Sbjct: 522 KQASRQFYSILQERQSLPAWEERETILKLLSKHQVVVISGMTGCG 566
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 325 ELEGVNNDVIFSLLQHICTTQR---PGAILVFLPGWDTINSLHRSMCQSSFFNS 375
+ E VN D+I +LL+ I + PGAILVFLPG I L+ + +S FN+
Sbjct: 816 DFERVNFDLIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNN 869
>gi|242025160|ref|XP_002432994.1| ATP-dependent RNA helicase A, putative [Pediculus humanus corporis]
gi|212518503|gb|EEB20256.1| ATP-dependent RNA helicase A, putative [Pediculus humanus corporis]
Length = 1249
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 75/115 (65%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+L+FLPGW+ I +L + + Q + F F I+PLHS LP QK +F+ P + K++LA
Sbjct: 655 VLIFLPGWNLIFALMKHLQQHTIFGGYDFVILPLHSQLPREDQKRVFHVYPPNITKVILA 714
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAE+SITI+DIV+V+D K KM F +N+ W S N +QR+GRAGR
Sbjct: 715 TNIAESSITINDIVFVIDSCKAKMKIFTAHNNMTHYATVWASKTNLEQRKGRAGR 769
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 34/53 (64%), Gaps = 3/53 (5%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNSCLLYEFAMV 384
++I LL++I + PGA+L+FLPGW+ I +L + + Q + F Y+F ++
Sbjct: 637 ELIVKLLEYIKSINIPGAVLIFLPGWNLIFALMKHLQQHTIFGG---YDFVIL 686
>gi|157382888|gb|ABV48879.1| maleless [Drosophila simulans]
Length = 1298
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/116 (48%), Positives = 80/116 (68%), Gaps = 1/116 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFLPGW+ I +L + + ++ F ++S+++I+P HS +P Q+ +F PEGV KI+L
Sbjct: 656 ILVFLPGWNLIFALMKFLQNTNIFGDTSQYRILPCHSQIPRDDQRKVFEPVPEGVTKIIL 715
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+TNIAETSITIDDIV+V+D K +M F +N+ W S N +QR+GRAGR
Sbjct: 716 STNIAETSITIDDIVFVIDICKARMKLFTSHNNLTNYATVWASKTNLEQRKGRAGR 771
Score = 42.7 bits (99), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 312 QYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSS 371
Q + + ML + + V+ +++ +LL HI + PGAILVFLPGW+ I +L + + ++
Sbjct: 621 QKTRNAMAMLSESD---VSFELLEALLMHIKSKNIPGAILVFLPGWNLIFALMKFLQNTN 677
Query: 372 FFNSCLLY 379
F Y
Sbjct: 678 IFGDTSQY 685
Score = 39.3 bits (90), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 25/46 (54%)
Query: 39 RKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
R+ Y++ LE R KLP MR +L + +N + +I G TG G
Sbjct: 367 RRQNDTEYRQFLEFRDKLPIAAMRSEILTAINDNPVVIIRGNTGCG 412
>gi|524946803|ref|XP_005073710.1| PREDICTED: putative ATP-dependent RNA helicase DHX57 [Mesocricetus
auratus]
Length = 1451
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 78/118 (66%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN---SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVFLPG I L+ + +S FN S R I PLHS L + Q+++F PP GV KI
Sbjct: 783 ILVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVIHPLHSSLSSEEQQAVFVKPPVGVTKI 842
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+++TNIAETSITIDD+VYV+D GK K +D + +L+ +S ANA QR+GRAGR
Sbjct: 843 IISTNIAETSITIDDVVYVIDSGKMKEKRYDAGKGMESLEDTSVSQANALQRKGRAGR 900
Score = 42.0 bits (97), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 31/45 (68%)
Query: 40 KLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
K SR++ +L+ R+ LP+++ R+ +L ++ +Q+ VISG TG G
Sbjct: 524 KQASRQFYSILQERQSLPAWEERETILKLLSKHQVVVISGMTGCG 568
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 325 ELEGVNNDVIFSLLQHICTTQR---PGAILVFLPGWDTINSLHRSMCQSSFFNS 375
+ E VN D+I +LL+ I + PGAILVFLPG I L+ + +S FN+
Sbjct: 755 DFERVNFDLIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNN 808
>gi|443921919|gb|ELU41447.1| DEAH box polypeptide 36 [Rhizoctonia solani AG-1 IA]
Length = 1184
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 78/122 (63%), Gaps = 7/122 (5%)
Query: 189 ILVFLPGWDTINSL-------HRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEG 241
+LVFLPGWD + SL H+++ FN +F + LHS +P Q+++F+ P G
Sbjct: 551 VLVFLPGWDEMMSLQKILDDRHQALLGVDLFNRDKFSLHLLHSTVPVAEQQAVFDPPRPG 610
Query: 242 VRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRA 301
VR+I+LATNIAETSITI D+VYVVD + K +D ++++L W+ +N QR GRA
Sbjct: 611 VRRIILATNIAETSITIPDVVYVVDTARIKEKRYDPARHMSSLVSAWVGSSNLNQRAGRA 670
Query: 302 GR 303
GR
Sbjct: 671 GR 672
>gi|521030843|gb|EPQ12629.1| ATP-dependent RNA helicase DHX29 [Myotis brandtii]
Length = 1288
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/115 (48%), Positives = 78/115 (67%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+L+FLPG I L+ + F+S R+++I LHS+L T Q S F PP GVRKIVLA
Sbjct: 790 VLIFLPGLAHIQQLYDLLSADRRFSSGRYKVIALHSILSTHDQASAFTLPPPGVRKIVLA 849
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAET ITI D+V+V+D G+TK + + +++L ++S A+A QR+GRAGR
Sbjct: 850 TNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGR 904
Score = 45.8 bits (107), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 35 KEMIRKLQSR-RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+ + RK QS +YQ +L R++LP ++ R A+++ ++ +++ V++G+TGSG
Sbjct: 470 RNLFRKFQSTPKYQGLLRERQQLPVFKHRSAIVETLKRHRVVVVAGDTGSG 520
>gi|256092860|ref|XP_002582095.1| ATP-dependent RNA Helicase [Schistosoma mansoni]
gi|353228861|emb|CCD75032.1| putative atp-dependent RNA helicase [Schistosoma mansoni]
Length = 1289
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/115 (46%), Positives = 78/115 (67%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+L+FLPGW+ I+ L + + S + S + I+PLHS +P Q+ +F + P GVRKIVLA
Sbjct: 633 VLIFLPGWNIISLLRKYLQSHSRYGSPNYVILPLHSQIPREDQRLVFRSTPSGVRKIVLA 692
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAE+SITI+D+V+V+D ++ F ++N+ + W S N +QRRGRAGR
Sbjct: 693 TNIAESSITINDVVFVIDFCLSRTKLFTARNNLTSYSTSWSSKTNLEQRRGRAGR 747
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 29 LDAAFKKEMIRKLQSR-RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+ A E +R+L S + + +++ R +LP R ++L+ VR N++T+I GETG G
Sbjct: 337 ISANLADERLRRLDSDPQLRSLMDERAQLPVNPYRVSILEAVRRNKVTIIRGETGCG 393
>gi|380016698|ref|XP_003692312.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like [Apis
florea]
Length = 1141
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 73/118 (61%), Gaps = 14/118 (11%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPG+D I R+ + LHS + T QK +F P G RKI+L+
Sbjct: 587 LLVFLPGYDDI--------------GLRYNLYVLHSNMQTCDQKKVFKPSPVGTRKIILS 632
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLK 306
TNIAETSITIDD+VYV+D GK K +FD + TLK WIS A AKQR+GRAGR K
Sbjct: 633 TNIAETSITIDDVVYVIDSGKVKEKSFDALSGVCTLKSNWISQACAKQRKGRAGRCRK 690
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 33/56 (58%)
Query: 48 EMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHLDFITLKRSETQQYP 103
++L RK LP + R+ +LD + NNQ+ +I GETGSG + L+ + +Q P
Sbjct: 158 DVLNYRKALPIFNFREDILDALNNNQVVIIGGETGSGKTTQVPQFILEHCQQRQQP 213
>gi|322701513|gb|EFY93262.1| DEAD/DEAH box helicase [Metarhizium acridum CQMa 102]
Length = 1349
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/118 (52%), Positives = 80/118 (67%), Gaps = 11/118 (9%)
Query: 189 ILVFLPGWDTIN---SLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
IL+FLPG IN +L RS+ NS ++PLH+ L T QK +F+ PP G RK+
Sbjct: 845 ILIFLPGVGEINHACNLLRSI------NS--LHVLPLHASLETREQKRVFSKPPPGKRKV 896
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
V+ATN+AETSITIDDIV V+D GK K ++FD ++N+ L+ W S A KQRRGRAGR
Sbjct: 897 VVATNVAETSITIDDIVAVIDSGKVKETSFDAQNNMRKLEETWASRAACKQRRGRAGR 954
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 41/51 (80%)
Query: 34 KKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
K+E +++ +S +++ML R++LP++QMR+ ++ V++N +T+ISGETGSG
Sbjct: 562 KEEWLQRQESSAWKDMLSKRQRLPAWQMREKIVKTVKDNHVTIISGETGSG 612
>gi|296193949|ref|XP_002744748.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2 [Callithrix
jacchus]
Length = 1429
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/118 (49%), Positives = 80/118 (67%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLH-RSMCQSSFF--NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
+L+FLPG+D I L R + F N+ R+Q+ LHS + T QK + PP GV+KI
Sbjct: 624 VLIFLPGYDEIVGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVLKNPPAGVQKI 683
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+L+TNIAETSIT++D+V+V+D GK K +FD + + LK WIS A+A QR+GRAGR
Sbjct: 684 ILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGR 741
>gi|298712532|emb|CBJ26800.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1386
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/116 (50%), Positives = 78/116 (67%), Gaps = 1/116 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNS-SRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFLPG I + ++ + FN + ++ PLH L T QK+IF PP+GVRKIV+
Sbjct: 627 ILVFLPGLAEITKMLEALAGNPLFNDKEKTRVYPLHGSLSTSDQKAIFEVPPKGVRKIVV 686
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+TNIAETSITI+D V+VVD + K + FD + + L W+S A+AKQRRGRAGR
Sbjct: 687 STNIAETSITIEDCVFVVDSCRVKENRFDDANMMPMLLECWVSKASAKQRRGRAGR 742
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 63/112 (56%), Gaps = 19/112 (16%)
Query: 19 TRQKLLNDPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVIS 78
R+K+L+D + KE +K ++R YQ+ML R KLP+Y+MRD ++ VRN Q+ V+S
Sbjct: 239 AREKVLSDSLF-----KEFDKKTRTRPYQDMLAKRSKLPAYEMRDHIVRTVRNAQVVVVS 293
Query: 79 GETGSGPPLHLDFITLKRSETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHI 130
GETG G +T Q P VL+ + E EG + ++I + + I
Sbjct: 294 GETGCG-------------KTTQVPQLVLDTMI-MEKEGASANIIVTQPRRI 331
>gi|255087578|ref|XP_002505712.1| predicted protein [Micromonas sp. RCC299]
gi|226520982|gb|ACO66970.1| predicted protein [Micromonas sp. RCC299]
Length = 1563
Score = 116 bits (290), Expect = 4e-23, Method: Composition-based stats.
Identities = 57/119 (47%), Positives = 78/119 (65%), Gaps = 3/119 (2%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSS---RFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
+LVF+PG I L R + QS + + +++PL+ L + Q+ IF PP+GVRKI
Sbjct: 1043 VLVFMPGQFEITKLIRKLEQSRLLDPADVGELRVLPLYGSLSSKDQRKIFERPPKGVRKI 1102
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT 304
V+ATNIAETS+TIDD+ YVVD G+ K +D ++ L W+S A AKQRRGR+GRT
Sbjct: 1103 VVATNIAETSVTIDDVRYVVDTGRAKEMCWDSHRGLSVLADTWVSQAAAKQRRGRSGRT 1161
>gi|224046921|ref|XP_002196913.1| PREDICTED: putative ATP-dependent RNA helicase DHX57 [Taeniopygia
guttata]
Length = 1357
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 56/118 (47%), Positives = 79/118 (66%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN---SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
+L+FLPG I L+ + ++ FN S R + PLHS L + Q+S+F PP GV KI
Sbjct: 820 VLIFLPGLAEIKMLYEQLQTNALFNNRHSKRCVVYPLHSSLSSEDQQSVFLRPPAGVTKI 879
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+++TNIAETS+TIDD+VYV+D GK K +D + +L+ ++S ANA QR+GRAGR
Sbjct: 880 IISTNIAETSVTIDDVVYVIDSGKMKEKRYDPSKGMESLEDTFVSKANALQRKGRAGR 937
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 39 RKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHLDFITLKRSE 98
+K SR +Q ML R+KLP++Q R+ +L ++ ++Q+ V+SG TG G + L S
Sbjct: 500 QKKSSRHFQSMLYERQKLPAWQERENILGLLESHQVLVVSGMTGCGKTTQIPQFILDAS- 558
Query: 99 TQQYPNDVLNML 110
Q P+ V N++
Sbjct: 559 LQGSPSRVANII 570
>gi|449551091|gb|EMD42055.1| hypothetical protein CERSUDRAFT_129393 [Ceriporiopsis subvermispora
B]
Length = 1099
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 53/121 (43%), Positives = 79/121 (65%), Gaps = 6/121 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQS------SFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGV 242
+LVFLPGW+ I S +++ +F +SS++ + LHS +P Q+ +F PP G+
Sbjct: 469 VLVFLPGWEEIVSTQKALMDGRPLLGINFSDSSKYSVHLLHSTIPVAEQQVVFEPPPPGI 528
Query: 243 RKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAG 302
R+I+LATNIAETS+TI D+VYVVD + K +D + +I++L W+ +N QR GRAG
Sbjct: 529 RRIILATNIAETSVTIPDVVYVVDTARVKEQRYDPQRHISSLISAWVGSSNLNQRAGRAG 588
Query: 303 R 303
R
Sbjct: 589 R 589
>gi|395508183|ref|XP_003758393.1| PREDICTED: putative ATP-dependent RNA helicase DHX57 [Sarcophilus
harrisii]
Length = 1373
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 80/118 (67%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQ---IIPLHSMLPTVSQKSIFNTPPEGVRKI 245
+LVFLPG I L+ + + FN+ R + I+PLHS L + Q+ +F PP+GV KI
Sbjct: 836 VLVFLPGLAEIKMLYEQLQSNPLFNNRRSKRCIILPLHSSLSSEEQQLVFVKPPKGVTKI 895
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+++TNIAETSITIDD+VYV+D GK K +D + +L+ ++S ANA QR+GRAGR
Sbjct: 896 IISTNIAETSITIDDVVYVIDSGKMKEKRYDPSKGMESLEDTFVSRANALQRKGRAGR 953
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 37/55 (67%)
Query: 30 DAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+A KE K SR+YQ +L+ R+ LP+++ R+ +LD++ +Q+ V+SG TG G
Sbjct: 505 NAKICKEFHIKKASRQYQSILQERRSLPAWEERETILDLLSKHQVLVVSGMTGCG 559
>gi|348569048|ref|XP_003470310.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase DHX29
[Cavia porcellus]
Length = 1363
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 56/115 (48%), Positives = 78/115 (67%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+L+FLPG I L+ + F+S R+++I LHS+L T Q + F PP GVRKIVLA
Sbjct: 864 VLIFLPGLAHIQQLYDLLSNDRRFHSERYKVIALHSILSTQDQAAAFTPPPPGVRKIVLA 923
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAET ITI D+V+V+D G+TK + + +++L +IS A+A QR+GRAGR
Sbjct: 924 TNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFISKASALQRQGRAGR 978
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 40/51 (78%), Gaps = 1/51 (1%)
Query: 35 KEMIRKLQSR-RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+ + RKLQS +YQ +L+ R++LP ++ RD++++ ++ +++ V++GETGSG
Sbjct: 545 RNLFRKLQSTPKYQRLLKERQQLPVFKHRDSIVETLKRHRVVVVAGETGSG 595
>gi|507683382|ref|XP_004711178.1| PREDICTED: LOW QUALITY PROTEIN: putative ATP-dependent RNA helicase
DHX57 [Echinops telfairi]
Length = 1370
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 58/118 (49%), Positives = 78/118 (66%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQ---IIPLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVFLPG I L+ + + FN+ R I PLHS L + Q+++F PP GV KI
Sbjct: 834 ILVFLPGLAEIKMLYEQLQSNPLFNNRRSAQCVIHPLHSSLSSEEQQAVFVKPPVGVTKI 893
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+++TNIAETSITIDD+VYV+D GK K +D + +L+ ++S ANA QR+GRAGR
Sbjct: 894 IISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGR 951
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 35/55 (63%)
Query: 30 DAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+A K+ K SR++Q L+ R LP+++ R+ +L+++ +Q+ VISG TG G
Sbjct: 511 NAKICKQFQIKQTSRQFQSALQERHSLPAWEERETILNLLSKHQVLVISGMTGCG 565
>gi|195475660|ref|XP_002090102.1| GE19435 [Drosophila yakuba]
gi|194176203|gb|EDW89814.1| GE19435 [Drosophila yakuba]
Length = 1283
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 55/116 (47%), Positives = 81/116 (69%), Gaps = 1/116 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQS-SFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFLPGW+ I +L + + + +F ++S+++I+P HS +P Q+ +F PEG+ KI+L
Sbjct: 657 ILVFLPGWNLIFALMKFLQNTNTFSDTSQYRILPCHSQIPRDDQRKVFEPVPEGITKIIL 716
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+TNIAETSITIDDIV+V+D K +M F +N+ + W S N +QR+GRAGR
Sbjct: 717 STNIAETSITIDDIVFVIDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGR 772
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
Query: 39 RKLQSRR-----YQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
R L+ RR Y++ LE R KLP MR +L + +N + +I G TG G
Sbjct: 362 RSLRERRQNDNEYRKFLEFRDKLPIAAMRSEILTAINDNPVVIIRGNTGCG 412
Score = 38.5 bits (88), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 312 QYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSS 371
Q + + ML + + V+ +++ +LL HI + GAILVFLPGW+ I +L + + ++
Sbjct: 622 QKTRNAMAMLSESD---VSFELLEALLMHIKSKNISGAILVFLPGWNLIFALMKFLQNTN 678
Query: 372 FFNSCLLY 379
F+ Y
Sbjct: 679 TFSDTSQY 686
>gi|345491450|ref|XP_003426609.1| PREDICTED: putative ATP-dependent RNA helicase DHX57-like isoform 2
[Nasonia vitripennis]
Length = 1271
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 61/119 (51%), Positives = 79/119 (66%), Gaps = 2/119 (1%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN--SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIV 246
ILVFLPG I SL + + + S +F IIPLHS L + Q +F P GVRKIV
Sbjct: 741 ILVFLPGIAEIMSLKDLLNDNRMLSPKSGKFLIIPLHSTLSSEEQSLVFKRPKPGVRKIV 800
Query: 247 LATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTL 305
L+TNIAETS+TIDD V+V+D GK K + F+ N+ +L+ W+S ANA QR+GRAGR +
Sbjct: 801 LSTNIAETSVTIDDCVFVIDTGKMKETRFNSNQNMESLEMCWVSRANALQRKGRAGRVM 859
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
Query: 5 HSPKGLTHSVTSWETRQKLLNDPVL--DAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMR 62
H KG T+ + R ++ D +L D K + + K ++ Y +M + R+KLP++
Sbjct: 394 HYKKGSTNK----KNRDEIAWDDILRQDIEIKAKFMNKQKNPHYLKMKDVRRKLPAWSKM 449
Query: 63 DAVLDMVRNNQITVISGETGSG 84
+ VL+ + NQ+T+ISGETG G
Sbjct: 450 NEVLETIHENQVTIISGETGCG 471
>gi|501310558|dbj|GAC99316.1| hypothetical protein PHSY_006917 [Pseudozyma hubeiensis SY62]
Length = 1685
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 56/114 (49%), Positives = 74/114 (64%)
Query: 190 LVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLAT 249
L+F+PG I H + F + FQ+ PLHS + + +Q ++FN PP GVRKIV+AT
Sbjct: 1155 LIFMPGLAEIRKCHDMLVDHPTFGGAGFQLFPLHSTISSENQGAVFNVPPPGVRKIVIAT 1214
Query: 250 NIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
NIAET ITI DI V+D GK + +D K I+ L +I+ +NAKQRRGRAGR
Sbjct: 1215 NIAETGITIPDITCVIDSGKHREMRYDEKRQISRLVECFIARSNAKQRRGRAGR 1268
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 30/45 (66%)
Query: 40 KLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
++ S YQ+ML R+ LP R +LD+V NNQI V+SGETG G
Sbjct: 824 RVASPSYQKMLPGRQGLPIANHRQEILDLVENNQIFVLSGETGCG 868
>gi|47205228|emb|CAF92278.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1091
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 53/115 (46%), Positives = 77/115 (66%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPGW+ I S+ R + + F S+ +QI+PLHS +P Q+ +F P+ V K++L+
Sbjct: 590 VLVFLPGWNLIYSMQRHLETNPHFGSNCYQILPLHSQIPREEQRRVFEPVPDNVTKVILS 649
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TN+AETSITI+D+VYV+D K K+ F +N+ W S N +QR+GRAGR
Sbjct: 650 TNLAETSITINDVVYVIDSCKQKVKLFTSHNNMTNYATVWASKTNLEQRKGRAGR 704
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 30/44 (68%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
+++ +LL++I T Q GA+LVFLPGW+ I S+ R + + F S
Sbjct: 572 ELVEALLKYIETLQVAGAVLVFLPGWNLIYSMQRHLETNPHFGS 615
>gi|331219058|ref|XP_003322206.1| ATP-dependent RNA helicase A [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 1575
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 81/123 (65%), Gaps = 8/123 (6%)
Query: 189 ILVFLPGWDTINSLHRSMCQS--------SFFNSSRFQIIPLHSMLPTVSQKSIFNTPPE 240
+LVFLPGW+ I + + +F +SS+F++ LHS +P Q+ +F+ PP+
Sbjct: 689 VLVFLPGWEEIKGVQTILTDPRQFPLLNLNFNDSSKFEVHVLHSAIPVADQQLVFSPPPK 748
Query: 241 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 300
GVR+++L+TNIAETS+TI D+V+VVD GK K FD + ++++L W+ +N QR GR
Sbjct: 749 GVRRVILSTNIAETSVTIPDVVFVVDTGKIKEKRFDPERHLSSLITAWVGTSNLNQRAGR 808
Query: 301 AGR 303
AGR
Sbjct: 809 AGR 811
>gi|224003029|ref|XP_002291186.1| hypothetical protein THAPSDRAFT_262980 [Thalassiosira pseudonana
CCMP1335]
gi|220972962|gb|EED91293.1| hypothetical protein THAPSDRAFT_262980, partial [Thalassiosira
pseudonana CCMP1335]
Length = 645
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/167 (38%), Positives = 101/167 (60%), Gaps = 3/167 (1%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSF--FNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIV 246
IL+F+PGW I ++ + + +S F ++ ++PLHSM+P Q +F+ P +GVRKIV
Sbjct: 309 ILIFVPGWADITNVIKQLEVTSRKRFQGCKWNLLPLHSMVPPKDQLKVFDDPKKGVRKIV 368
Query: 247 LATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLK 306
++TN+AETSITI+D+VYV+D G + + ++ NIA L+ IS +NA+QRRGRAGR
Sbjct: 369 ISTNLAETSITIEDVVYVIDSGLMRGTTYNPHTNIAALETMQISRSNAQQRRGRAGRCKP 428
Query: 307 RSETQQYPN-DVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILV 352
+ + Y + + + D EL + + L + Q PG + V
Sbjct: 429 GTLFKLYSELEFIEEMSDHELPEMLRTPVEELCLRVKALQLPGDLPV 475
>gi|194864148|ref|XP_001970794.1| GG10841 [Drosophila erecta]
gi|190662661|gb|EDV59853.1| GG10841 [Drosophila erecta]
Length = 1304
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 55/116 (47%), Positives = 81/116 (69%), Gaps = 1/116 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQS-SFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFLPGW+ I +L + + + +F ++S+++I+P HS +P Q+ +F PEG+ KI+L
Sbjct: 657 ILVFLPGWNLIFALMKFLQNTNTFGDTSQYRILPCHSQIPRDDQRKVFEPVPEGITKIIL 716
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+TNIAETSITIDDIV+V+D K +M F +N+ + W S N +QR+GRAGR
Sbjct: 717 STNIAETSITIDDIVFVIDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGR 772
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 4/53 (7%)
Query: 331 NDVIFSLLQ----HICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNSCLLY 379
+DV F LL+ HI + PGAILVFLPGW+ I +L + + ++ F Y
Sbjct: 634 SDVSFELLEALLLHIKSKNIPGAILVFLPGWNLIFALMKFLQNTNTFGDTSQY 686
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
Query: 39 RKLQSRR-----YQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
R L+ RR Y++ LE R KLP MR +L + +N + +I G TG G
Sbjct: 362 RSLRERRQNDNEYRQFLEFRDKLPIAAMRSEILSAINDNPVVIIRGNTGCG 412
>gi|482569613|gb|EOA33801.1| hypothetical protein CARUB_v10021272mg [Capsella rubella]
Length = 1455
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 63/150 (42%), Positives = 89/150 (59%), Gaps = 11/150 (7%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQ-IIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
IL+FLPG I L + S F ++PLHS + + Q+ +F PP+G+RK++
Sbjct: 914 ILIFLPGVSEIYMLLDRLAASYRFRGPAADWLLPLHSSIASTEQRKVFLRPPKGIRKVIA 973
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR---- 303
ATNIAETSITIDD+VYV+D GK K + ++ + ++++ +WIS ANA+QR GRAGR
Sbjct: 974 ATNIAETSITIDDVVYVIDSGKHKENRYNPQKKLSSMVEDWISQANARQRTGRAGRVKPG 1033
Query: 304 ------TLKRSETQQYPNDVLNMLKDPELE 327
T R E P V ML+ P +E
Sbjct: 1034 ICFSLYTRNRFEKLMRPYQVPEMLRMPLVE 1063
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 27/40 (67%)
Query: 45 RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+Y+EML+ R LP ++++ +L ++ + V+ GETGSG
Sbjct: 599 KYKEMLKTRNALPISEVKNGILQHLKEKDVLVVCGETGSG 638
>gi|389593045|ref|XP_001683301.2| putative ATP-dependent DEAD/H RNA helicase [Leishmania major strain
Friedlin]
gi|321399748|emb|CAJ04816.2| putative ATP-dependent DEAD/H RNA helicase [Leishmania major strain
Friedlin]
Length = 1087
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 75/115 (65%), Gaps = 2/115 (1%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGW I+ + + +S F + I+ LHS L T Q+ +F PP+ RKIVLA
Sbjct: 416 ILVFLPGWAAISCIANRLKRSQF--ARELSILMLHSSLTTSEQQRVFERPPKHYRKIVLA 473
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
T+IAETSITIDDIVYV+D G K +++D N + LK I AN QRRGRAGR
Sbjct: 474 TSIAETSITIDDIVYVIDSGLVKGTSYDPMGNTSALKATLIGKANGVQRRGRAGR 528
>gi|403161903|ref|XP_003890419.1| hypothetical protein PGTG_20968 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375171976|gb|EHS64505.1| hypothetical protein PGTG_20968 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 1427
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 81/123 (65%), Gaps = 8/123 (6%)
Query: 189 ILVFLPGWDTINSLHRSMCQS--------SFFNSSRFQIIPLHSMLPTVSQKSIFNTPPE 240
+LVFLPGW+ I + + +F +SS+F++ LHS +P Q+ +F+ PP+
Sbjct: 689 VLVFLPGWEEIKGVQTILTDPRQFPLLNLNFNDSSKFEVHVLHSAIPVADQQLVFSPPPK 748
Query: 241 GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 300
GVR+++L+TNIAETS+TI D+V+VVD GK K FD + ++++L W+ +N QR GR
Sbjct: 749 GVRRVILSTNIAETSVTIPDVVFVVDTGKIKEKRFDPERHLSSLITAWVGTSNLNQRAGR 808
Query: 301 AGR 303
AGR
Sbjct: 809 AGR 811
>gi|449550786|gb|EMD41750.1| hypothetical protein CERSUDRAFT_110326 [Ceriporiopsis subvermispora
B]
Length = 1471
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 55/116 (47%), Positives = 78/116 (67%), Gaps = 1/116 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSS-RFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
IL+F+PG I L+ ++ + + F + RF++ PLHS + T Q ++F+ PP G+RKIV+
Sbjct: 943 ILIFMPGMGEIRRLNDTLTEHATFGAEDRFKVYPLHSTISTEDQSAVFDIPPPGIRKIVI 1002
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
ATNIAET ITI DI V+D GK + FD K I+ L +++ +NA QRRGRAGR
Sbjct: 1003 ATNIAETGITIPDITCVIDSGKHREMRFDEKRQISRLVETYVAKSNAAQRRGRAGR 1058
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 34/54 (62%), Gaps = 4/54 (7%)
Query: 35 KEMIRKLQSRR----YQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+++I Q+R+ YQ+ML R++LP + R + ++ +QI V+SGETG G
Sbjct: 617 EKIIADFQARQASFAYQDMLRQREQLPISRYRQEITSILETSQILVLSGETGCG 670
>gi|426201435|gb|EKV51358.1| hypothetical protein AGABI2DRAFT_182315 [Agaricus bisporus var.
bisporus H97]
Length = 1336
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 78/121 (64%), Gaps = 6/121 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQS------SFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGV 242
+LVF PGWD I ++ + + +F +SS+F I LHS +P Q+ IF PP GV
Sbjct: 713 VLVFCPGWDEIKAVEKQLLDPKQPFAFNFSDSSKFSIHLLHSTIPLAEQQVIFEPPPRGV 772
Query: 243 RKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAG 302
R+++LATNIAETS+TI D+V+VVD + K FD + ++++L W+ +N QR GRAG
Sbjct: 773 RRVILATNIAETSVTIPDVVFVVDAARVKELRFDPERHMSSLVSAWVGSSNLNQRAGRAG 832
Query: 303 R 303
R
Sbjct: 833 R 833
>gi|195580870|ref|XP_002080257.1| GD10344 [Drosophila simulans]
gi|194192266|gb|EDX05842.1| GD10344 [Drosophila simulans]
Length = 1298
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 56/116 (48%), Positives = 80/116 (68%), Gaps = 1/116 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFLPGW+ I +L + + ++ F ++S ++I+P HS +P Q+ +F PEGV KI+L
Sbjct: 656 ILVFLPGWNLIFALMKFLQNTNIFGDTSLYRILPCHSQIPRDDQRKVFEPVPEGVTKIIL 715
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+TNIAETSITIDDIV+V+D K +M F +N+ + W S N +QR+GRAGR
Sbjct: 716 STNIAETSITIDDIVFVIDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGR 771
Score = 45.1 bits (105), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
Query: 312 QYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSS 371
Q + + ML + + V+ +++ +LL HI + PGAILVFLPGW+ I +L + + ++
Sbjct: 621 QKTRNAMAMLSESD---VSFELLEALLMHIKSKNIPGAILVFLPGWNLIFALMKFLQNTN 677
Query: 372 FFNSCLLY 379
F LY
Sbjct: 678 IFGDTSLY 685
Score = 39.7 bits (91), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 25/46 (54%)
Query: 39 RKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
R+ Y++ LE R KLP MR +L + +N + +I G TG G
Sbjct: 367 RRQNDNEYRQFLEFRDKLPIASMRSEILTAINDNPVVIIRGNTGCG 412
>gi|293345175|ref|XP_002725935.1| PREDICTED: ATP-dependent RNA helicase Dhx29-like [Rattus
norvegicus]
gi|392345365|ref|XP_002729053.2| PREDICTED: ATP-dependent RNA helicase Dhx29-like [Rattus
norvegicus]
Length = 1366
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 100/189 (52%), Gaps = 15/189 (7%)
Query: 130 ICTTQRPGAILVY--CTYTFMGVSPMKVFFCKNVLQRLMKGVGANSPKRW-VKLLRSMLV 186
I T + G I Y C G SP F + R V +P + + L+ +LV
Sbjct: 796 INVTSKAGGIKKYQECIPVQSGASPELSPFYQKYSSRTQYAVLYMNPHKINLDLILELLV 855
Query: 187 V------------PILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSI 234
+L+FLPG I L+ + F S R+Q+I LHS+L T Q +
Sbjct: 856 YLDKSPQFRNIEGAVLIFLPGLAHIQQLYDLLSNDRRFYSERYQLIALHSVLSTQDQAAA 915
Query: 235 FNTPPEGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANA 294
F PP GVRKIVLATNIAET ITI D+V+V+D G+TK + + +++L ++S A+A
Sbjct: 916 FMLPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASA 975
Query: 295 KQRRGRAGR 303
QR+GRAGR
Sbjct: 976 LQRQGRAGR 984
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
Query: 35 KEMIRKLQSR-RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+ + R+LQS +YQ +L+ R++LP ++ R ++++ ++ +++ V++GETGSG
Sbjct: 550 RNLFRRLQSTPKYQRLLKERQQLPVFKHRASIVETLKRHRVVVVAGETGSG 600
>gi|471392263|ref|XP_004380525.1| PREDICTED: ATP-dependent RNA helicase DHX29 [Trichechus manatus
latirostris]
Length = 1368
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 56/115 (48%), Positives = 77/115 (66%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+L+FLPG I L+ + F S R+++I LHS+L T Q + F PP GVRKIVLA
Sbjct: 868 VLIFLPGLAHIQQLYDLLSTDRRFYSQRYKVIALHSILSTQDQAAAFTLPPPGVRKIVLA 927
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAET ITI D+V+V+D G+TK + F +++L ++S A+A QR+GRAGR
Sbjct: 928 TNIAETGITIPDVVFVIDTGRTKENKFHESSQMSSLVETFVSKASALQRQGRAGR 982
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 40/51 (78%), Gaps = 1/51 (1%)
Query: 35 KEMIRKLQSR-RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+ + RKLQS +YQ +L+ R++LP ++ R+++++ ++ +++ V++GETGSG
Sbjct: 548 RNLFRKLQSTPKYQRLLKERQQLPVFKHRNSIVETLKRHRVVVVAGETGSG 598
>gi|409083523|gb|EKM83880.1| hypothetical protein AGABI1DRAFT_124205 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1325
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 78/121 (64%), Gaps = 6/121 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQS------SFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGV 242
+LVF PGWD I ++ + + +F +SS+F I LHS +P Q+ IF PP GV
Sbjct: 702 VLVFCPGWDEIKAVEKQLLDPKQPFAFNFSDSSKFSIHLLHSTIPLAEQQVIFEPPPRGV 761
Query: 243 RKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAG 302
R+++LATNIAETS+TI D+V+VVD + K FD + ++++L W+ +N QR GRAG
Sbjct: 762 RRVILATNIAETSVTIPDVVFVVDAARVKELRFDPERHMSSLVSAWVGSSNLNQRAGRAG 821
Query: 303 R 303
R
Sbjct: 822 R 822
>gi|443896472|dbj|GAC73816.1| ATP-dependent RNA helicase A [Pseudozyma antarctica T-34]
Length = 1674
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 56/114 (49%), Positives = 73/114 (64%)
Query: 190 LVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLAT 249
L+F+PG I H + F FQ+ PLHS + + +Q ++FN PP GVRKIV+AT
Sbjct: 1145 LIFMPGLAEIRKCHDMLVDHPTFGGPGFQLFPLHSTISSENQGAVFNVPPAGVRKIVIAT 1204
Query: 250 NIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
NIAET ITI DI V+D GK + +D K I+ L +I+ +NAKQRRGRAGR
Sbjct: 1205 NIAETGITIPDITCVIDSGKHREMRYDEKRQISRLVECFIARSNAKQRRGRAGR 1258
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 30/45 (66%)
Query: 40 KLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
++ S YQ+ML R+ LP R +LD+V NNQI V+SGETG G
Sbjct: 813 RVASPSYQKMLPGRQSLPIANHRQEILDLVENNQIFVLSGETGCG 857
>gi|157382886|gb|ABV48878.1| maleless [Drosophila simulans]
Length = 1298
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 56/116 (48%), Positives = 80/116 (68%), Gaps = 1/116 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFLPGW+ I +L + + ++ F ++S ++I+P HS +P Q+ +F PEGV KI+L
Sbjct: 656 ILVFLPGWNLIFALMKFLQNTNIFGDTSLYRILPCHSQIPRDDQRKVFEPVPEGVTKIIL 715
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+TNIAETSITIDDIV+V+D K +M F +N+ + W S N +QR+GRAGR
Sbjct: 716 STNIAETSITIDDIVFVIDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGR 771
Score = 45.1 bits (105), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
Query: 312 QYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSS 371
Q + + ML + + V+ +++ +LL HI + PGAILVFLPGW+ I +L + + ++
Sbjct: 621 QKTRNAMAMLSESD---VSFELLEALLMHIKSKNIPGAILVFLPGWNLIFALMKFLQNTN 677
Query: 372 FFNSCLLY 379
F LY
Sbjct: 678 IFGDTSLY 685
Score = 39.7 bits (91), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 25/46 (54%)
Query: 39 RKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
R+ Y++ LE R KLP MR +L + +N + +I G TG G
Sbjct: 367 RRQNDNEYRQFLEFRDKLPIASMRSEILTAINDNPVVIIRGNTGCG 412
>gi|157382884|gb|ABV48877.1| maleless [Drosophila simulans]
Length = 1298
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 56/116 (48%), Positives = 80/116 (68%), Gaps = 1/116 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFLPGW+ I +L + + ++ F ++S ++I+P HS +P Q+ +F PEGV KI+L
Sbjct: 656 ILVFLPGWNLIFALMKFLQNTNIFGDTSLYRILPCHSQIPRDDQRKVFEPVPEGVTKIIL 715
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+TNIAETSITIDDIV+V+D K +M F +N+ + W S N +QR+GRAGR
Sbjct: 716 STNIAETSITIDDIVFVIDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGR 771
Score = 45.1 bits (105), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
Query: 312 QYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSS 371
Q + + ML + + V+ +++ +LL HI + PGAILVFLPGW+ I +L + + ++
Sbjct: 621 QKTRNAMAMLSESD---VSFELLEALLMHIKSKNIPGAILVFLPGWNLIFALMKFLQNTN 677
Query: 372 FFNSCLLY 379
F LY
Sbjct: 678 IFGDTSLY 685
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 25/46 (54%)
Query: 39 RKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
R+ Y++ LE R KLP MR +L + +N + +I G TG G
Sbjct: 367 RRQNDNEYRQFLEFRDKLPIASMRSEILTAINDNPVVIIRGNTGCG 412
>gi|157382882|gb|ABV48876.1| maleless [Drosophila simulans]
Length = 1298
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 56/116 (48%), Positives = 80/116 (68%), Gaps = 1/116 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFLPGW+ I +L + + ++ F ++S ++I+P HS +P Q+ +F PEGV KI+L
Sbjct: 656 ILVFLPGWNLIFALMKFLQNTNIFGDTSLYRILPCHSQIPRDDQRKVFEPVPEGVTKIIL 715
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+TNIAETSITIDDIV+V+D K +M F +N+ + W S N +QR+GRAGR
Sbjct: 716 STNIAETSITIDDIVFVIDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGR 771
Score = 45.1 bits (105), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
Query: 312 QYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSS 371
Q + + ML + + V+ +++ +LL HI + PGAILVFLPGW+ I +L + + ++
Sbjct: 621 QKTRNAMAMLSESD---VSFELLEALLMHIKSKNIPGAILVFLPGWNLIFALMKFLQNTN 677
Query: 372 FFNSCLLY 379
F LY
Sbjct: 678 IFGDTSLY 685
Score = 39.7 bits (91), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 25/46 (54%)
Query: 39 RKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
R+ Y++ LE R KLP MR +L + +N + +I G TG G
Sbjct: 367 RRQNDNEYRQFLEFRDKLPIASMRSEILTAINDNPVVIIRGNTGCG 412
>gi|311273735|ref|XP_003133996.1| PREDICTED: ATP-dependent RNA helicase DHX29 [Sus scrofa]
Length = 1366
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 78/115 (67%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+L+FLPG I L+ + F S R+++I LHS+L T Q + F PP+GVRKIVLA
Sbjct: 866 VLIFLPGLAHIQQLYDLLSTDRRFFSERYKVIALHSILSTQDQAAAFTLPPQGVRKIVLA 925
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAET ITI D+V+V+D G+TK + + +++L ++S A+A QR+GRAGR
Sbjct: 926 TNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGR 980
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 40/51 (78%), Gaps = 1/51 (1%)
Query: 35 KEMIRKLQSR-RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+ + RKLQS +YQ +L+ R++LP ++ R+++++ ++ +++ V++GETGSG
Sbjct: 546 RNLFRKLQSTPKYQRLLKERQQLPVFKHRNSIVETLKRHRVVVVAGETGSG 596
>gi|466035235|ref|XP_004275191.1| PREDICTED: ATP-dependent RNA helicase DHX29 [Orcinus orca]
Length = 1365
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 78/115 (67%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+L+FLPG I L+ + F S R+++I LHS+L T Q + F PP+GVRKIVLA
Sbjct: 868 VLIFLPGLAHIQQLYDLLSTDRRFFSERYKVIALHSILSTQDQAAAFTLPPQGVRKIVLA 927
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAET ITI D+V+V+D G+TK + + +++L ++S A+A QR+GRAGR
Sbjct: 928 TNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGR 982
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
Query: 35 KEMIRKLQSR-RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+ + RKLQS +YQ +L+ R++LP ++ R+++++ +R ++ V++GETGSG
Sbjct: 548 RNLFRKLQSTPKYQRLLKERQQLPVFKHRNSIVETLRRHRAVVVAGETGSG 598
>gi|390354905|ref|XP_787344.2| PREDICTED: ATP-dependent RNA helicase DHX29-like
[Strongylocentrotus purpuratus]
Length = 932
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 61/148 (41%), Positives = 94/148 (63%), Gaps = 10/148 (6%)
Query: 189 ILVFLPGWDTINSLHRSMCQS--SFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIV 246
+L+F+PG I L+ M Q+ +F + R+ ++ LHS+L + Q + F PP GVRKIV
Sbjct: 404 VLIFMPGLAQIQQLYE-MLQADPNFSKTDRYTLLALHSVLSSDDQSAAFGIPPPGVRKIV 462
Query: 247 LATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT-- 304
+ATNIAET ITI D+V+V+D GK K + ++ + +++L+ ++S A+AKQR+GRAGR
Sbjct: 463 IATNIAETGITIPDVVFVIDAGKVKENRYNERSQMSSLEEMYVSKASAKQRQGRAGRVRE 522
Query: 305 ---LKRSETQQYPNDVLNMLKDPELEGV 329
+ Q+Y DVL PE++ V
Sbjct: 523 GFCFRLYTKQRY--DVLRSFTQPEIQRV 548
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 28/40 (70%)
Query: 45 RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
++ +LE RK LP +Q RD VL+ + + I +++GETGSG
Sbjct: 94 QHGRLLEKRKTLPVFQHRDQVLERIYKDSIVIVAGETGSG 133
>gi|325088553|gb|EGC41863.1| DEAH box polypeptide 36 [Ajellomyces capsulatus H88]
Length = 1456
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 59/115 (51%), Positives = 74/115 (64%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVF+PG I L+ + FN S + I LHS + + Q+ F+ PP GVRKIV+A
Sbjct: 934 ILVFMPGMAEIRRLNDEILSEPLFNKSDWVIHALHSSIASEDQEKAFHVPPTGVRKIVIA 993
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAET ITI DI V+D GK K+ FD K ++ L +I+ ANAKQRRGRAGR
Sbjct: 994 TNIAETGITIPDITAVIDTGKEKVMRFDEKRQLSKLVESFIARANAKQRRGRAGR 1048
>gi|296194585|ref|XP_002745012.1| PREDICTED: ATP-dependent RNA helicase DHX29 [Callithrix jacchus]
Length = 1367
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 78/115 (67%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+L+FLPG I L+ + F+S R+++I LHS+L T Q + F PP GVRKIVLA
Sbjct: 868 VLIFLPGLAHIQQLYDLLSNDRRFSSERYRVIALHSILSTQDQAAAFTLPPPGVRKIVLA 927
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAET ITI D+V+V+D G+TK + + +++L ++S A+A QR+GRAGR
Sbjct: 928 TNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGR 982
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 40/51 (78%), Gaps = 1/51 (1%)
Query: 35 KEMIRKLQSR-RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+ + RKLQS +YQ +L+ R++LP ++ RD++++ ++ +++ V++GETGSG
Sbjct: 548 RNLFRKLQSTPKYQRLLKERQQLPVFKHRDSIVETLKRHRVVVVAGETGSG 598
>gi|426246499|ref|XP_004017031.1| PREDICTED: ATP-dependent RNA helicase DHX29 [Ovis aries]
Length = 1365
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 78/115 (67%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+L+FLPG I L+ + F S R+++I LHS+L T Q + F PP+GVRKIVLA
Sbjct: 865 VLIFLPGLAHIQQLYDLLSTDRRFFSERYKVIALHSILSTQDQAAAFTLPPQGVRKIVLA 924
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAET ITI D+V+V+D G+TK + + +++L ++S A+A QR+GRAGR
Sbjct: 925 TNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGR 979
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 23 LLNDPVLDAAFKKEMIRKLQSR-RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGET 81
L ++ V D + + RKLQS +YQ +L+ R++LP ++ R ++++ ++ +++ V++GET
Sbjct: 533 LESEKVEDLEPVRNLFRKLQSTPKYQRLLKERQQLPVFKHRSSIVETLKRHRVVVVAGET 592
Query: 82 GSG 84
GSG
Sbjct: 593 GSG 595
>gi|71004110|ref|XP_756721.1| hypothetical protein UM00574.1 [Ustilago maydis 521]
gi|46095990|gb|EAK81223.1| hypothetical protein UM00574.1 [Ustilago maydis 521]
Length = 1684
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 56/114 (49%), Positives = 74/114 (64%)
Query: 190 LVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLAT 249
L+F+PG I H + F S FQ+ PLHS + + +Q ++F+ PP GVRKIV+AT
Sbjct: 1154 LIFMPGLAEIRKCHDMLADHPTFGGSGFQLFPLHSTISSENQGAVFHVPPPGVRKIVIAT 1213
Query: 250 NIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
NIAET ITI DI V+D GK + +D K I+ L +I+ +NAKQRRGRAGR
Sbjct: 1214 NIAETGITIPDITCVIDSGKHREMRYDEKRQISRLVECFIARSNAKQRRGRAGR 1267
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 30/45 (66%)
Query: 40 KLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
++ S YQ+ML R+ LP R +LD++ NNQI V+SGETG G
Sbjct: 823 RVASPSYQKMLPGRQNLPIANHRQEILDLIENNQIFVLSGETGCG 867
>gi|329663671|ref|NP_001193063.1| ATP-dependent RNA helicase DHX29 [Bos taurus]
gi|296475799|tpg|DAA17914.1| TPA: DEAH (Asp-Glu-Ala-His) box polypeptide 29 [Bos taurus]
Length = 1366
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 78/115 (67%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+L+FLPG I L+ + F S R+++I LHS+L T Q + F PP+GVRKIVLA
Sbjct: 866 VLIFLPGLAHIQQLYDLLSTDRRFFSERYKVIALHSILSTQDQAAAFTLPPQGVRKIVLA 925
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAET ITI D+V+V+D G+TK + + +++L ++S A+A QR+GRAGR
Sbjct: 926 TNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGR 980
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 23 LLNDPVLDAAFKKEMIRKLQSR-RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGET 81
L ++ V D + + RKLQS +YQ +L+ R++LP ++ R +V++ ++ +++ V++GET
Sbjct: 534 LESEKVEDLEPVRNLFRKLQSTPKYQRLLKERQQLPVFKHRSSVVETLKRHRVVVVAGET 593
Query: 82 GSG 84
GSG
Sbjct: 594 GSG 596
>gi|432105561|gb|ELK31758.1| ATP-dependent RNA helicase DHX29 [Myotis davidii]
Length = 1529
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 78/115 (67%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+L+FLPG I L+ + F+S R+++I LHS+L T Q + F PP GVRKIVLA
Sbjct: 1031 VLIFLPGLAHIQQLYDLLSADRRFSSGRYKVIALHSILSTQDQATAFTLPPRGVRKIVLA 1090
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAET ITI D+V+V+D G+TK + + +++L ++S A+A QR+GRAGR
Sbjct: 1091 TNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGR 1145
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 40/51 (78%), Gaps = 1/51 (1%)
Query: 35 KEMIRKLQSR-RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+ ++RKLQS +YQ +L+ R++LP ++ R A+++ ++ +++ V++G+TGSG
Sbjct: 711 RNLLRKLQSTPKYQGLLKERQQLPVFKHRSAIVETLKRHRVVVVAGDTGSG 761
>gi|156382101|ref|XP_001632393.1| predicted protein [Nematostella vectensis]
gi|156219448|gb|EDO40330.1| predicted protein [Nematostella vectensis]
Length = 1403
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 58/118 (49%), Positives = 82/118 (69%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLHRSMCQS-SFFNSSRFQIIPLHSMLPTVSQK--SIFNTPPEGVRKI 245
+LVFLPG+D I +L + S + N+ R+Q+ LHS + Q+ S+F P VRKI
Sbjct: 608 VLVFLPGYDDIITLRDILASSKEYGNTKRYQLFTLHSSMQPGEQRKASVFRKLPPTVRKI 667
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
VL+TNIAETS+TIDD+V+V+D GK K +FD +++TL+ W+S A+A QRRGR+GR
Sbjct: 668 VLSTNIAETSVTIDDVVFVIDSGKVKEKSFDALTSVSTLQVAWVSKASAVQRRGRSGR 725
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%)
Query: 329 VNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNSCLLYEF 381
V+ D+I+ L+ HIC + + GA+LVFLPG+D I +L + S + + Y+
Sbjct: 587 VDLDLIYCLIDHICNSGQQGAVLVFLPGYDDIITLRDILASSKEYGNTKRYQL 639
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 26/37 (70%)
Query: 48 EMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
E+ RK LP ++ R ++ +++NQ+ ++SGETGSG
Sbjct: 158 ELTAFRKSLPIWEQRQDIIKCIKDNQVILVSGETGSG 194
>gi|242776144|ref|XP_002478787.1| ATP dependent RNA helicase, putative [Talaromyces stipitatus ATCC
10500]
gi|218722406|gb|EED21824.1| ATP dependent RNA helicase, putative [Talaromyces stipitatus ATCC
10500]
Length = 1458
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 63/118 (53%), Positives = 74/118 (62%), Gaps = 1/118 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPG I LH + S FN + I LHS + + Q+ F PPEG RKIV+A
Sbjct: 943 ILVFLPGLAEIRRLHDEIGSDSTFNQG-WIIHTLHSSIASEDQEKAFLVPPEGTRKIVIA 1001
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLK 306
TNIAET ITI DI V+D GK K+ FD K ++ L +IS ANAKQRRGRAGR K
Sbjct: 1002 TNIAETGITIPDITAVIDAGKEKVMRFDEKRQLSRLVESFISRANAKQRRGRAGRVQK 1059
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 27 PVLDA-AFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
P +DA + +K K+ + +Q M E+RK LP + + +LD + N+Q +I ETGSG
Sbjct: 631 PKIDADSLRKLWEEKMNTTSFQHMTESRKNLPVWAYKQQILDTLANHQAVIICSETGSG 689
>gi|507649646|ref|XP_004703673.1| PREDICTED: ATP-dependent RNA helicase DHX29 [Echinops telfairi]
Length = 1363
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 56/115 (48%), Positives = 77/115 (66%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+L+FLPG I L+ + F S R+++I LHS+L T Q + F PP GVRKIVLA
Sbjct: 866 VLIFLPGLAHIQQLYDLLSTDRRFYSERYKVIALHSILSTQDQAAAFTFPPPGVRKIVLA 925
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAET ITI D+V+V+D G+TK + F +++L ++S A+A QR+GRAGR
Sbjct: 926 TNIAETGITIPDVVFVIDTGRTKENKFHESSQMSSLVETFVSKASALQRQGRAGR 980
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
Query: 35 KEMIRKLQSR-RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+ + RKLQS +YQ +L+ R++LP ++ R+ +++ ++ +++ V++GETGSG
Sbjct: 546 RNLFRKLQSTPKYQRLLKERQQLPVFKHRNLIVETLKRHRVVVVAGETGSG 596
>gi|393218367|gb|EJD03855.1| P-loop containing nucleoside triphosphate hydrolase protein
[Fomitiporia mediterranea MF3/22]
Length = 1430
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 74/115 (64%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
LVF+PG I L+ + + F S +FQ+ PLHS + + Q +F+ PP G+RKIV+A
Sbjct: 902 FLVFMPGLGEIRRLNDILSEHPLFGSDKFQVFPLHSTISSEDQSLVFDIPPPGIRKIVIA 961
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAET +TI DI V+D GK + FD K I+ L +I+ +NA QRRGRAGR
Sbjct: 962 TNIAETGVTIPDITCVIDSGKHREMRFDEKRQISRLIETFIARSNAAQRRGRAGR 1016
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 31/57 (54%)
Query: 33 FKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHL 89
K E + SR YQEML+ R LP R V++M+ + + V+SGETG G L
Sbjct: 579 LKAEFRARQSSRPYQEMLKQRNALPIASYRKTVIEMLEMSPVIVLSGETGCGKSTQL 635
>gi|297672309|ref|XP_002814248.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 [Pongo abelii]
Length = 481
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 62/132 (46%), Positives = 85/132 (64%), Gaps = 7/132 (5%)
Query: 226 LPTVSQKSIFNTPPEGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLK 285
+PTV+Q +F P GVRKIV+ATNIAETSITIDD+VYV+D GK K ++FD ++NI+T+
Sbjct: 1 MPTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMS 60
Query: 286 PEWISLANAKQRRGRAGRTLKRSETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC--- 342
EW+S ANAKQR+GRAGR Y ++L D +L +++ + L+ +C
Sbjct: 61 AEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLP----EILRTPLEELCLQI 116
Query: 343 TTQRPGAILVFL 354
R G I FL
Sbjct: 117 KILRLGGIAYFL 128
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 376 CLLY---EFAMVDNKPKEIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHPGTTA 432
CLL+ + ++ + +E I V + + F+ A ++KELR LD+LL K+ P
Sbjct: 382 CLLFFGGDISIQKDNDQETIAVDEWIVFQSPARIAHLVKELRKELDILLQEKIESPHPVD 441
Query: 433 WGD 435
W D
Sbjct: 442 WND 444
>gi|512972935|ref|XP_004848570.1| PREDICTED: ATP-dependent RNA helicase DHX29 [Heterocephalus glaber]
Length = 1362
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 56/115 (48%), Positives = 77/115 (66%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+L+FLPG I L+ + F S R+++I LHS+L T Q + F PP GVRKIVLA
Sbjct: 865 VLIFLPGLAHIQQLYDLLSNDRRFYSERYKVIALHSILSTQDQAAAFTLPPPGVRKIVLA 924
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAET ITI D+V+V+D G+TK + + +++L +IS A+A QR+GRAGR
Sbjct: 925 TNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFISKASALQRQGRAGR 979
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 40/51 (78%), Gaps = 1/51 (1%)
Query: 35 KEMIRKLQSR-RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+ + RKLQS +YQ +L+ R++LP ++ RD++++ ++ +++ V++GETGSG
Sbjct: 546 RNLFRKLQSTPKYQRLLKERQQLPVFKHRDSIVETLKRHRVVVVAGETGSG 596
>gi|440912987|gb|ELR62501.1| ATP-dependent RNA helicase DHX29 [Bos grunniens mutus]
Length = 1372
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 78/115 (67%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+L+FLPG I L+ + F S R+++I LHS+L T Q + F PP+GVRKIVLA
Sbjct: 872 VLIFLPGLAHIQQLYDLLSTDRRFFSERYKVIALHSILSTQDQAAAFTLPPQGVRKIVLA 931
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAET ITI D+V+V+D G+TK + + +++L ++S A+A QR+GRAGR
Sbjct: 932 TNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGR 986
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 23 LLNDPVLDAAFKKEMIRKLQSR-RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGET 81
L ++ V D + + RKLQS +YQ +L+ R++LP ++ R +V++ ++ +++ V++GET
Sbjct: 540 LESEKVEDLEPVRNLFRKLQSTPKYQRLLKERQQLPVFKHRSSVVETLKRHRVVVVAGET 599
Query: 82 GSG 84
GSG
Sbjct: 600 GSG 602
>gi|340521890|gb|EGR52123.1| hypothetical protein TRIREDRAFT_53044 [Trichoderma reesei QM6a]
Length = 1366
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 58/115 (50%), Positives = 79/115 (68%), Gaps = 5/115 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL+FLPG IN C +S + + ++PLH+ L T QK +F++PP G RK+V+A
Sbjct: 864 ILIFLPGVGEINQ----AC-NSLRSINSLHVLPLHASLETKEQKRVFSSPPPGKRKVVVA 918
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TN+AETSITIDDIV V+D GK K ++FD ++N+ L+ W S A KQR+GRAGR
Sbjct: 919 TNVAETSITIDDIVVVIDSGKVKETSFDPQNNMRKLEETWASQAACKQRQGRAGR 973
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 41/57 (71%)
Query: 28 VLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
++D K+E +R+ + +EM+ R+ LP++QM+DA++ V NQ+T+ISGETGSG
Sbjct: 574 IVDNRSKEEWLRRQGNPAQREMITKRQALPAWQMQDAIVQTVNKNQVTIISGETGSG 630
>gi|225559471|gb|EEH07754.1| DEAH box polypeptide 36 [Ajellomyces capsulatus G186AR]
Length = 1454
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 59/115 (51%), Positives = 74/115 (64%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVF+PG I L+ + FN S + I LHS + + Q+ F+ PP GVRKIV+A
Sbjct: 934 ILVFMPGMAEIRRLNDEILSEPLFNKSDWVIHALHSSIASEDQEKAFHIPPTGVRKIVIA 993
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAET ITI DI V+D GK K+ FD K ++ L +I+ ANAKQRRGRAGR
Sbjct: 994 TNIAETGITIPDITAVIDTGKEKVMRFDEKRQLSKLVESFIARANAKQRRGRAGR 1048
Score = 38.1 bits (87), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 22/32 (68%)
Query: 53 RKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
RK LP +Q +D +LD + +NQ +I ETGSG
Sbjct: 653 RKTLPIWQFKDQILDTLASNQAIIICSETGSG 684
>gi|384245593|gb|EIE19086.1| P-loop containing nucleoside triphosphate hydrolase protein,
partial [Coccomyxa subellipsoidea C-169]
Length = 815
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 74/115 (64%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPG I +++ + S ++PLHS + Q+ +F PP VRK+VLA
Sbjct: 325 ILVFLPGLGEIMAVYDRLTASRAHREGTLLVLPLHSSISPGEQRRVFERPPAHVRKVVLA 384
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETS+TI+D+VYVVD GK K +D ++ L +W+S A+A QRRGRAGR
Sbjct: 385 TNIAETSLTIEDVVYVVDSGKLKERRYDASRGMSLLVEDWVSRASALQRRGRAGR 439
>gi|146086807|ref|XP_001465650.1| putative ATP-dependent DEAD/H RNA helicase [Leishmania infantum
JPCM5]
gi|134069749|emb|CAM68075.1| putative ATP-dependent DEAD/H RNA helicase [Leishmania infantum
JPCM5]
Length = 1087
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 59/115 (51%), Positives = 75/115 (65%), Gaps = 2/115 (1%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGW I+ + + +S F + I+ LHS L T Q+ +F PP+ RKIVLA
Sbjct: 416 ILVFLPGWAAISCIANRLKRSQF--ARELSILMLHSSLTTAEQQRVFERPPKNYRKIVLA 473
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
T+IAETSITI+DIVYV+D G K +++D N + LK I AN QRRGRAGR
Sbjct: 474 TSIAETSITINDIVYVIDSGLVKGTSYDPMGNTSALKATLIGKANGVQRRGRAGR 528
>gi|512933659|ref|XP_004907467.1| PREDICTED: ATP-dependent RNA helicase DHX29 [Heterocephalus glaber]
Length = 1362
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 56/115 (48%), Positives = 77/115 (66%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+L+FLPG I L+ + F S R+++I LHS+L T Q + F PP GVRKIVLA
Sbjct: 865 VLIFLPGLAHIQQLYDLLSNDRRFYSERYKVIALHSILSTQDQAAAFTLPPPGVRKIVLA 924
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAET ITI D+V+V+D G+TK + + +++L +IS A+A QR+GRAGR
Sbjct: 925 TNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFISKASALQRQGRAGR 979
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 40/51 (78%), Gaps = 1/51 (1%)
Query: 35 KEMIRKLQSR-RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+ + RKLQS +YQ +L+ R++LP ++ RD++++ ++ +++ V++GETGSG
Sbjct: 546 RNLFRKLQSTPKYQRLLKERQQLPVFKHRDSIVETLKRHRVVVVAGETGSG 596
>gi|340521891|gb|EGR52124.1| Hypothetical protein TRIREDRAFT_53044 [Trichoderma reesei QM6a]
Length = 1350
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 58/115 (50%), Positives = 79/115 (68%), Gaps = 5/115 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL+FLPG IN C +S + + ++PLH+ L T QK +F++PP G RK+V+A
Sbjct: 848 ILIFLPGVGEINQ----AC-NSLRSINSLHVLPLHASLETKEQKRVFSSPPPGKRKVVVA 902
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TN+AETSITIDDIV V+D GK K ++FD ++N+ L+ W S A KQR+GRAGR
Sbjct: 903 TNVAETSITIDDIVVVIDSGKVKETSFDPQNNMRKLEETWASQAACKQRQGRAGR 957
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 41/57 (71%)
Query: 28 VLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
++D K+E +R+ + +EM+ R+ LP++QM+DA++ V NQ+T+ISGETGSG
Sbjct: 558 IVDNRSKEEWLRRQGNPAQREMITKRQALPAWQMQDAIVQTVNKNQVTIISGETGSG 614
>gi|297840685|ref|XP_002888224.1| helicase domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297334065|gb|EFH64483.1| helicase domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 1418
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 55/116 (47%), Positives = 80/116 (68%), Gaps = 1/116 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQ-IIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFLPG IN L + S F ++PLHS + + Q+ +F PP+G+RK+V+
Sbjct: 896 ILVFLPGMAEINMLLNRLSASYHFRGPCGDWLLPLHSSIASTEQRKVFLRPPKGIRKVVI 955
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
ATNIAETSITI+D+VYV+D GK K + ++ + ++++ +W+S ANA+QR GRAGR
Sbjct: 956 ATNIAETSITIEDVVYVIDSGKHKENRYNPQKKLSSMVEDWVSKANARQRMGRAGR 1011
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 51/105 (48%), Gaps = 14/105 (13%)
Query: 31 AAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHLD 90
++ K++ K + +Y+EML+ R LP +++ +L ++ + V+ GETGSG
Sbjct: 584 SSLKQKQENKKKMPKYKEMLKTRAALPISEVKKDILQKLKEKDVLVVCGETGSG------ 637
Query: 91 FITLKRSETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQR 135
+T Q P +L+ + D G N +I + + I QR
Sbjct: 638 -------KTTQVPQFILDDMIDSGHGGYCN-IICTQPRAISVAQR 674
>gi|154274271|ref|XP_001537987.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150415595|gb|EDN10948.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 1283
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 59/115 (51%), Positives = 73/115 (63%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVF+PG I L + FN S + I LHS + + Q+ F+ PP GVRKIV+A
Sbjct: 926 ILVFMPGMAEIRRLSDQILSEPLFNKSDWVIHALHSSIASEDQEKAFHVPPTGVRKIVIA 985
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAET ITI DI V+D GK K+ FD K ++ L +I+ ANAKQRRGRAGR
Sbjct: 986 TNIAETGITIPDITAVIDTGKEKVMRFDEKRQLSKLVESFIARANAKQRRGRAGR 1040
>gi|119575310|gb|EAW54915.1| DEAH (Asp-Glu-Ala-His) box polypeptide 29, isoform CRA_a [Homo
sapiens]
Length = 733
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 55/116 (47%), Positives = 77/116 (66%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+L+FLPG I L+ + F S R+++I LHS+L T Q + F PP GVRKIVLA
Sbjct: 234 VLIFLPGLAHIQQLYDLLSNDRRFYSERYKVIALHSILSTQDQAAAFTLPPPGVRKIVLA 293
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT 304
TNIAET ITI D+V+V+D G+TK + + +++L ++S A+A QR+GRAGR
Sbjct: 294 TNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGRV 349
>gi|351714362|gb|EHB17281.1| ATP-dependent RNA helicase DHX29, partial [Heterocephalus glaber]
Length = 1354
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 56/115 (48%), Positives = 77/115 (66%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+L+FLPG I L+ + F S R+++I LHS+L T Q + F PP GVRKIVLA
Sbjct: 865 VLIFLPGLAHIQQLYDLLSNDRRFYSERYKVIALHSILSTQDQAAAFTLPPPGVRKIVLA 924
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAET ITI D+V+V+D G+TK + + +++L +IS A+A QR+GRAGR
Sbjct: 925 TNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFISKASALQRQGRAGR 979
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 40/51 (78%), Gaps = 1/51 (1%)
Query: 35 KEMIRKLQSR-RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+ + RKLQS +YQ +L+ R++LP ++ RD++++ ++ +++ V++GETGSG
Sbjct: 546 RNLFRKLQSTPKYQRLLKERQQLPVFKHRDSIVETLKRHRVVVVAGETGSG 596
>gi|26390418|dbj|BAC25894.1| unnamed protein product [Mus musculus]
Length = 621
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 56/116 (48%), Positives = 77/116 (66%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+L+FLPG I L+ + F S R+Q+I LHS+L T Q + F PP GVRKIVLA
Sbjct: 125 VLIFLPGLAHIQQLYDLLSSDRRFYSERYQVIALHSVLSTQDQAAAFMFPPPGVRKIVLA 184
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT 304
TNIAET ITI D+V+V+D G+TK + + +++L ++S A+A QR+GRAGR
Sbjct: 185 TNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGRV 240
>gi|328861604|gb|EGG10707.1| hypothetical protein MELLADRAFT_115470 [Melampsora larici-populina
98AG31]
Length = 1615
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 64/143 (44%), Positives = 84/143 (58%), Gaps = 10/143 (6%)
Query: 190 LVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLAT 249
LVFLP DTI L + + F ++ FQI PLHS + +Q +F TPP GVRKIV++T
Sbjct: 1063 LVFLPSLDTIRKLTEILESHAVFGTAAFQIFPLHSTISNENQGLVFQTPPPGVRKIVIST 1122
Query: 250 NIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR------ 303
NIAET ITI D+ V+D GK + +D K I+ L +I+ +NA QR+GRAGR
Sbjct: 1123 NIAETGITIPDVTCVIDSGKHREMRYDEKRQISRLVETFIAKSNATQRKGRAGRVQEGIC 1182
Query: 304 ----TLKRSETQQYPNDVLNMLK 322
T R ETQ N + ML+
Sbjct: 1183 FHLFTKHRMETQFAENPLPEMLR 1205
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 33/74 (44%)
Query: 30 DAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHL 89
D +E + Q YQ ML R LP R +++ + NQ+ V+ GETG G L
Sbjct: 739 DMTLMEEFAMRQQWPSYQYMLRYRASLPIAVYRSSIIQTIEQNQVVVLCGETGCGKSTQL 798
Query: 90 DFITLKRSETQQYP 103
L+ ++ P
Sbjct: 799 PAFILEHELSRGRP 812
>gi|521730605|gb|EPQ60688.1| P-loop containing nucleoside triphosphate hydrolase protein
[Gloeophyllum trabeum ATCC 11539]
Length = 1460
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 59/116 (50%), Positives = 77/116 (66%), Gaps = 1/116 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSR-FQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVF+PG I L+ + + F ++ FQI PLHS + T +Q ++FN PP GVRKIV+
Sbjct: 930 ILVFMPGLGEIRRLNELLGEHPVFGAADDFQIFPLHSTISTENQGAVFNIPPPGVRKIVI 989
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
ATNIAET ITI DI V+D GK K +D K ++ L +I+ +NA QRRGRAGR
Sbjct: 990 ATNIAETGITIPDITCVIDTGKHKEMRYDEKRQMSRLIETFIAKSNAAQRRGRAGR 1045
Score = 42.7 bits (99), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 26/39 (66%)
Query: 46 YQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
YQEML+ R LP RD ++ + ++Q+ V+SGETG G
Sbjct: 620 YQEMLQYRNGLPVAHYRDEIVSALESSQVLVLSGETGCG 658
>gi|482570516|gb|EOA34704.1| hypothetical protein CARUB_v10022272mg [Capsella rubella]
Length = 1408
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 63/150 (42%), Positives = 90/150 (60%), Gaps = 11/150 (7%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNS-SRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFLPG IN L + S F S ++PLHS + + QK +F PP+G+RK+++
Sbjct: 875 ILVFLPGTSEINMLLNRLAASYRFRGPSGDWLLPLHSYIASSEQKKVFLHPPKGIRKVIV 934
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR---- 303
ATNIAETS+T++D+VYV+D GK K ++ + + ++ +WIS ANA+QR GRAGR
Sbjct: 935 ATNIAETSLTVEDVVYVIDSGKHKERRYNPQKKLTSMVEDWISKANARQRMGRAGRVKPG 994
Query: 304 ------TLKRSETQQYPNDVLNMLKDPELE 327
T R E P V +L+ P +E
Sbjct: 995 HCFSLYTRHRFEKLMRPYQVPEILRVPLVE 1024
Score = 45.4 bits (106), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 79/373 (21%), Positives = 144/373 (38%), Gaps = 66/373 (17%)
Query: 31 AAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHLD 90
++ K++ K + ++Y+ ML+ R LP ++++ +L ++ + V+ GETGSG
Sbjct: 562 SSLKRKQENKKKMQKYKGMLKTRAALPISEVKNDILQKLKEKDVLVVCGETGSG------ 615
Query: 91 FITLKRSETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQR---------PG---A 138
+T Q P +L+ + D G N +I + + I QR PG +
Sbjct: 616 -------KTTQVPQFILDDMIDSGNGGYCN-IICTQPRAISVAQRVADERCEPPPGFNDS 667
Query: 139 ILVY-CTYTFMGVSPMKVFFCKNVLQRLMKGVGANSPKRWVKLL------RSMLVVPILV 191
++ Y + ++ FC + L K VG + K ++ RS L +L+
Sbjct: 668 LVGYQVRHKIARSEKTRLMFCTTGI-LLRKLVGDKTLKDVTHIIVDEVHERSHLSDFLLI 726
Query: 192 FLP------GWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
L WD + + + S+ ++++F P ++ + R
Sbjct: 727 ILKSLIEKQSWDNTSPKLKVILMSATVDANQFS--RYFGQCPVITAQG---------RTH 775
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTL 305
+ T E + D ++ + + + +LK RG+ L
Sbjct: 776 PVTTYFLEDIFERTKYLLASDSPAALSADTSISEKLGSLKV----------HRGKKNLML 825
Query: 306 KR-SETQQYPNDVLNMLKD----PELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTI 360
+ D LN+ D ++ D++ L+ HI T GAILVFLPG I
Sbjct: 826 AGWGDNYLVSEDGLNLSYDSSNYESYNVIDYDLLEELICHIDDTCEEGAILVFLPGTSEI 885
Query: 361 NSLHRSMCQSSFF 373
N L + S F
Sbjct: 886 NMLLNRLAASYRF 898
>gi|170033973|ref|XP_001844850.1| ATP-dependent RNA helicase A [Culex quinquefasciatus]
gi|167875095|gb|EDS38478.1| ATP-dependent RNA helicase A [Culex quinquefasciatus]
Length = 1313
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 57/116 (49%), Positives = 75/116 (64%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPG+D I + + S + F+I LHS + T Q ++F + P G RKI+L+
Sbjct: 575 ILVFLPGYDDILEQYELLSGSRSLANGSFRIYMLHSNMQTNDQNAVFKSVPHGTRKIILS 634
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT 304
TNIAETSITIDD+V+V+D GK K ++D + +L WIS A A QR GRAGRT
Sbjct: 635 TNIAETSITIDDVVFVIDSGKVKQKHYDSVTSTTSLTATWISQACATQRSGRAGRT 690
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 11/77 (14%)
Query: 307 RSETQQYPNDVLNMLKDPELEGVNND-----VIFSLLQHICTTQRPGAILVFLPGWDTIN 361
+ + Q P + +L D N+D +IF ++ +IC PG ILVFLPG+D I
Sbjct: 527 QQQMQSPPKHLAKILLDVYQSTTNDDKIDHRLIFDVISYICAQLGPGGILVFLPGYDDIL 586
Query: 362 SLH------RSMCQSSF 372
+ RS+ SF
Sbjct: 587 EQYELLSGSRSLANGSF 603
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 33/59 (55%)
Query: 49 MLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHLDFITLKRSETQQYPNDVL 107
+L+ R +LP RD +++ + NQ+T+ISG TGSG + L+ S + P ++
Sbjct: 156 VLQERHRLPISPYRDTIMNCLNQNQVTIISGSTGSGKTTQIPQYILESSTLRGEPCQII 214
>gi|504142837|ref|XP_004583854.1| PREDICTED: ATP-dependent RNA helicase DHX29 [Ochotona princeps]
Length = 1245
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 77/115 (66%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+L+FLPG I L+ + F S R+++I LHS+L T Q + F PP GVRKIVLA
Sbjct: 746 VLIFLPGLAHIQQLYDLLSNDRRFYSERYRVIALHSILSTQDQAAAFTLPPAGVRKIVLA 805
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAET ITI D+V+V+D G+TK + + +++L ++S A+A QR+GRAGR
Sbjct: 806 TNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGR 860
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 40/51 (78%), Gaps = 1/51 (1%)
Query: 35 KEMIRKLQSR-RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+ + RKLQS +YQ +L+ R++LP ++ RD++++ ++ +++ V++GETGSG
Sbjct: 426 RNLFRKLQSTPKYQRLLKERQQLPVFKHRDSIVETLKRHRVVVVAGETGSG 476
>gi|46852276|ref|NP_766182.2| ATP-dependent RNA helicase Dhx29 [Mus musculus]
gi|81911463|sp|Q6PGC1.1|DHX29_MOUSE RecName: Full=ATP-dependent RNA helicase Dhx29; AltName: Full=DEAH
box protein 29
gi|34784758|gb|AAH57112.1| DEAH (Asp-Glu-Ala-His) box polypeptide 29 [Mus musculus]
gi|51896004|gb|AAH82319.1| DEAH (Asp-Glu-Ala-His) box polypeptide 29 [Mus musculus]
Length = 1365
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 56/115 (48%), Positives = 77/115 (66%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+L+FLPG I L+ + F S R+Q+I LHS+L T Q + F PP GVRKIVLA
Sbjct: 869 VLIFLPGLAHIQQLYDLLSSDRRFYSERYQVIALHSVLSTQDQAAAFMFPPPGVRKIVLA 928
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAET ITI D+V+V+D G+TK + + +++L ++S A+A QR+GRAGR
Sbjct: 929 TNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGR 983
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 55/94 (58%), Gaps = 16/94 (17%)
Query: 4 PHSPKGLTHS-VTSWETRQKLLNDPVL-----------DAAFKKEMIRKLQSR-RYQEML 50
P S KG + SWE L++D L D A + + R+LQS +YQ +L
Sbjct: 509 PESEKGGSEDPEESWEN---LVSDEDLAALSLEPTSAEDLAPVRSLFRRLQSTPKYQRLL 565
Query: 51 EARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+ R++LP ++ RD++++ ++ +++ V++GETGSG
Sbjct: 566 KERQQLPVFKHRDSIVETLKRHRVVVVAGETGSG 599
>gi|240272887|gb|EER36412.1| DEAH box polypeptide 36 [Ajellomyces capsulatus H143]
Length = 842
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 59/115 (51%), Positives = 74/115 (64%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVF+PG I L+ + FN S + I LHS + + Q+ F+ PP GVRKIV+A
Sbjct: 343 ILVFMPGMAEIRRLNDEILSEPLFNKSDWVIHALHSSIASEDQEKAFHVPPTGVRKIVIA 402
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAET ITI DI V+D GK K+ FD K ++ L +I+ ANAKQRRGRAGR
Sbjct: 403 TNIAETGITIPDITAVIDTGKEKVMRFDEKRQLSKLVESFIARANAKQRRGRAGR 457
>gi|148686456|gb|EDL18403.1| DEAH (Asp-Glu-Ala-His) box polypeptide 29, isoform CRA_b [Mus
musculus]
Length = 1366
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 56/115 (48%), Positives = 77/115 (66%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+L+FLPG I L+ + F S R+Q+I LHS+L T Q + F PP GVRKIVLA
Sbjct: 870 VLIFLPGLAHIQQLYDLLSSDRRFYSERYQVIALHSVLSTQDQAAAFMFPPPGVRKIVLA 929
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAET ITI D+V+V+D G+TK + + +++L ++S A+A QR+GRAGR
Sbjct: 930 TNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGR 984
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 55/94 (58%), Gaps = 16/94 (17%)
Query: 4 PHSPKGLTHS-VTSWETRQKLLNDPVL-----------DAAFKKEMIRKLQSR-RYQEML 50
P S KG + SWE L++D L D A + + R+LQS +YQ +L
Sbjct: 510 PESEKGGSEDPEESWEN---LVSDEDLAALSLEPTSAEDLAPVRSLFRRLQSTPKYQRLL 566
Query: 51 EARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+ R++LP ++ RD++++ ++ +++ V++GETGSG
Sbjct: 567 KERQQLPVFKHRDSIVETLKRHRVVVVAGETGSG 600
>gi|189526746|ref|XP_001921063.1| PREDICTED: putative ATP-dependent RNA helicase DHX57 [Danio rerio]
Length = 1417
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 54/118 (45%), Positives = 77/118 (65%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQ---IIPLHSMLPTVSQKSIFNTPPEGVRKI 245
+LVFLPG I L+ + + FN+ R + PLHS L Q+++F P GV KI
Sbjct: 880 VLVFLPGLAEIKQLYEQLQSNRMFNNRRTNRCVVYPLHSSLSNEEQQAVFTRPQNGVTKI 939
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+++TNIAETS+TIDD+VYV+D G+ K +D ++ +L+ W+S ANA QR+GRAGR
Sbjct: 940 IISTNIAETSVTIDDVVYVIDSGRMKEKRYDASRSMESLEDVWVSRANALQRKGRAGR 997
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 43/76 (56%)
Query: 35 KEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHLDFITL 94
+E RK SRRY M E R+KLP++Q R+A+L+ + NQ+ VISG TG G + L
Sbjct: 548 REFKRKRSSRRYISMQEQRQKLPAWQKREAILECLVKNQVLVISGMTGCGKTTQIPQFIL 607
Query: 95 KRSETQQYPNDVLNML 110
P+ V N++
Sbjct: 608 DNFLQTGRPDRVANII 623
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 9/92 (9%)
Query: 313 YPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQR---PGAILVFLPGWDTINSLHRSMCQ 369
Y V+ L +L+ +N D++ SLL+ I PGA+LVFLPG I L+ +
Sbjct: 840 YSKSVVKTLAAMDLDKINMDLVESLLEWIVDGDHSYPPGAVLVFLPGLAEIKQLYEQLQS 899
Query: 370 SSFFNS-----CLLYEF-AMVDNKPKEIITVR 395
+ FN+ C++Y + + N+ ++ + R
Sbjct: 900 NRMFNNRRTNRCVVYPLHSSLSNEEQQAVFTR 931
>gi|196002115|ref|XP_002110925.1| hypothetical protein TRIADDRAFT_54364 [Trichoplax adhaerens]
gi|190586876|gb|EDV26929.1| hypothetical protein TRIADDRAFT_54364 [Trichoplax adhaerens]
Length = 1256
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 60/117 (51%), Positives = 79/117 (67%), Gaps = 2/117 (1%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQI--IPLHSMLPTVSQKSIFNTPPEGVRKIV 246
ILVFLPG++ I ++ + Q F SR +I LHS++ Q+ IF + P V+KI+
Sbjct: 546 ILVFLPGYEDIVNVKDRILQRKFSKHSRLKIRIFILHSLVEITRQREIFKSCPHDVKKII 605
Query: 247 LATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
L+TNIAETSITIDD+V V+D G+ KM NFD + ++L WIS ANAKQR GRAGR
Sbjct: 606 LSTNIAETSITIDDVVDVIDSGRIKMKNFDALSSASSLTSAWISKANAKQRAGRAGR 662
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 315 NDVLNMLKDP-ELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSF 372
N +L + D + E ++ D+I ++ +IC GAILVFLPG++ I ++ + Q F
Sbjct: 510 NSLLKLCTDSIQGEKIDYDLITHIISYICKEDNKGAILVFLPGYEDIVNVKDRILQRKF 568
>gi|21740289|emb|CAD39154.1| hypothetical protein [Homo sapiens]
Length = 831
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 77/115 (66%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+L+FLPG I L+ + F S R+++I LHS+L T Q + F PP GVRKIVLA
Sbjct: 332 VLIFLPGLAHIQQLYDLLSNDRRFYSERYKVIALHSILSTQDQAAAFTLPPPGVRKIVLA 391
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAET ITI D+V+V+D G+TK + + +++L ++S A+A QR+GRAGR
Sbjct: 392 TNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGR 446
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 41/51 (80%), Gaps = 1/51 (1%)
Query: 35 KEMIRKLQSR-RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+ + RKLQS +YQ++L+ R++LP ++ RD++++ ++ +++ V++GETGSG
Sbjct: 12 RNLFRKLQSTPKYQKLLKERQQLPVFKHRDSIVETLKRHRVVVVAGETGSG 62
>gi|5102733|emb|CAB45191.1| hypothetical protein, similar to (AC007017) putative RNA helicase A
[Arabidopsis thaliana] [Homo sapiens]
Length = 809
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 77/115 (66%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+L+FLPG I L+ + F S R+++I LHS+L T Q + F PP GVRKIVLA
Sbjct: 310 VLIFLPGLAHIQQLYDLLSNDRRFYSERYKVIALHSILSTQDQAAAFTLPPPGVRKIVLA 369
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAET ITI D+V+V+D G+TK + + +++L ++S A+A QR+GRAGR
Sbjct: 370 TNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGR 424
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 34/40 (85%)
Query: 45 RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+YQ++L+ R++LP ++ RD++++ ++ +++ V++GETGSG
Sbjct: 1 KYQKLLKERQQLPVFKHRDSIVETLKRHRVVVVAGETGSG 40
>gi|260828967|ref|XP_002609434.1| hypothetical protein BRAFLDRAFT_124637 [Branchiostoma floridae]
gi|229294790|gb|EEN65444.1| hypothetical protein BRAFLDRAFT_124637 [Branchiostoma floridae]
Length = 1237
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 86/129 (66%), Gaps = 4/129 (3%)
Query: 178 VKLLRSMLVVP--ILVFLPGWDTINSLHRSMCQSSFFNSS-RFQIIPLHSMLPTVSQKSI 234
++ +RS L VP IL+FLPGW+ I +L R + + F +S ++Q++PLHS +P Q +
Sbjct: 605 LQYIRS-LEVPGAILIFLPGWNLIFALLRYLQEHPEFGASGKYQLLPLHSQIPREDQHRV 663
Query: 235 FNTPPEGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANA 294
F + P G+ K++L+TNIAETSITI+D+VYV+D K KM F +N+ W S N
Sbjct: 664 FLSVPSGITKVILSTNIAETSITINDVVYVIDSCKAKMKLFTSHNNMTNYATVWASKTNL 723
Query: 295 KQRRGRAGR 303
+QR+GRAGR
Sbjct: 724 EQRKGRAGR 732
Score = 45.1 bits (105), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 3/64 (4%)
Query: 318 LNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNSCL 377
L+ML + E+ + ++I LLQ+I + + PGAIL+FLPGW+ I +L R + + F +
Sbjct: 588 LSMLSEREM---SFELIVVLLQYIRSLEVPGAILIFLPGWNLIFALLRYLQEHPEFGASG 644
Query: 378 LYEF 381
Y+
Sbjct: 645 KYQL 648
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 34/54 (62%), Gaps = 5/54 (9%)
Query: 36 EMIRKLQSRR-----YQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+++ +LQ +R Q+ML+ R+ LP ++ D V++ + NN + +I GETG G
Sbjct: 324 DLLNQLQDQRNQDQTLQKMLQDRQALPIWESVDHVMNAIVNNSVVIIKGETGCG 377
>gi|478265194|gb|ENN82433.1| hypothetical protein YQE_01192, partial [Dendroctonus ponderosae]
Length = 1059
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 56/119 (47%), Positives = 78/119 (65%), Gaps = 2/119 (1%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSR--FQIIPLHSMLPTVSQKSIFNTPPEGVRKIV 246
ILVFLPG I SL+ + F R + ++PLHS L + Q +IF+ P G RKIV
Sbjct: 648 ILVFLPGIGEITSLYDQLVVHEEFGRRRRKYIVLPLHSSLTSEEQAAIFSKPKNGERKIV 707
Query: 247 LATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTL 305
++TN+AETS+TIDD V+V+D GK K +FD N+ +L+ W++ AN QR+GRAGR +
Sbjct: 708 ISTNLAETSVTIDDCVFVIDSGKMKEKHFDSNRNMESLETVWVTQANGLQRKGRAGRVM 766
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 2/80 (2%)
Query: 7 PKGLTHSVTSWETRQKLLNDPVL--DAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDA 64
P TS + +++L D + D ++ +K S +Y EML AR KLP++ + +
Sbjct: 339 PTHYRKGATSKDNKRRLTIDEIAKEDERIIRDFSQKKLSSKYGEMLGARTKLPAWTLMND 398
Query: 65 VLDMVRNNQITVISGETGSG 84
+L+ ++ +Q+ VISGETG G
Sbjct: 399 ILNFIQQSQVVVISGETGCG 418
>gi|478264662|gb|ENN82303.1| hypothetical protein YQE_01321, partial [Dendroctonus ponderosae]
Length = 859
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 56/119 (47%), Positives = 78/119 (65%), Gaps = 2/119 (1%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSR--FQIIPLHSMLPTVSQKSIFNTPPEGVRKIV 246
ILVFLPG I SL+ + F R + ++PLHS L + Q +IF+ P G RKIV
Sbjct: 621 ILVFLPGIGEITSLYDQLVVHEEFGRRRRKYIVLPLHSSLTSEEQAAIFSKPKNGERKIV 680
Query: 247 LATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTL 305
++TN+AETS+TIDD V+V+D GK K +FD N+ +L+ W++ AN QR+GRAGR +
Sbjct: 681 ISTNLAETSVTIDDCVFVIDSGKMKEKHFDSNRNMESLETVWVTQANGLQRKGRAGRVM 739
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Query: 7 PKGLTHSVTSWETRQKLLNDPVL--DAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDA 64
P TS + +++L D + D ++ K S +Y EML ARKKLP++ +R+
Sbjct: 301 PTHYRKGATSKDNKRRLTIDEIAKEDERIIRDFSEKKLSSKYGEMLGARKKLPAWTLRND 360
Query: 65 VLDMVRNNQITVISGETGSG 84
+L+ ++ +Q+ VISGETG G
Sbjct: 361 ILNFIQQSQVVVISGETGCG 380
>gi|512192119|gb|EPE07879.1| helicase associated domain-containing protein [Ophiostoma piceae UAMH
11346]
Length = 1494
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 74/115 (64%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL+F+PG IN + + S ++PLH+ L T Q+ +F PP G RK+V+A
Sbjct: 963 ILIFMPGVAEINQVCNLLKSDRGDTKSALHVLPLHAALETREQRRVFTAPPPGRRKVVVA 1022
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TN+AETSITIDDIV V+D G+ K +++D + N+ L+ W S A KQRRGRAGR
Sbjct: 1023 TNVAETSITIDDIVAVIDTGRVKETSYDAQTNMRKLEETWASKAACKQRRGRAGR 1077
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 81/360 (22%), Positives = 153/360 (42%), Gaps = 70/360 (19%)
Query: 30 DAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHL 89
D +++ +R+ ++ Q+M+ R++LP++++R+ V+D V NQ+T+ISGETGSG
Sbjct: 661 DDRSRQDWLRRQETPALQKMVAQRRRLPAWEVRETVVDTVAANQVTIISGETGSG----- 715
Query: 90 DFITLKRSETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHI--------CTTQRPGAILV 141
K ++ Q+ VL+ L L G++ +++ + + I + +R +
Sbjct: 716 -----KSTQAVQF---VLDDLYSNGL-GLSANMMVTQPRRISALGLADRVSEERCTNLGD 766
Query: 142 YCTYTFMGVSPM-----KVFFC-KNVLQRLMKGVGANSPKRWVKLLRSMLVVPILVFLPG 195
Y G S M ++ FC VL R ++ G R ++ S+ V +V
Sbjct: 767 EVGYVIRGESKMTPGRTRITFCTTGVLLRRLQVSGG----RIEDVVASLADVSHVV---- 818
Query: 196 WDTINSLHRSMCQSSFFNS----------SRFQIIPLHSMLPTVSQKSIFNTPPEGVRK- 244
I+ +H + F S +++ + + L + K F VR
Sbjct: 819 ---IDEVHERSLDTDFLLSILRDVLRARPDTLKLVLMSATLDASTFKDYF------VRDG 869
Query: 245 -IVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
V + NIA + +DD+ Y+ D + + F + NI T + + +Q R +
Sbjct: 870 LTVGSVNIAGRTFPVDDM-YLDDV--IRATGFGLDGNIRTYQNTY------QQNREKD-- 918
Query: 304 TLKRSETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSL 363
K S+ + L G+ D ++ + + G IL+F+PG IN +
Sbjct: 919 --KDSDETDPVAKAIQRLGSRINYGLVADTARAIDEEMSLANESGGILIFMPGVAEINQV 976
>gi|390604779|gb|EIN14170.1| P-loop containing nucleoside triphosphate hydrolase protein
[Punctularia strigosozonata HHB-11173 SS5]
Length = 1560
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 56/115 (48%), Positives = 74/115 (64%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL+F+PG I L+ + F + F I PLHS + + +Q ++FN PP G+RKIV+A
Sbjct: 1030 ILIFMPGLAEIRRLNDMLSAHRQFGGAEFVIYPLHSTISSENQNAVFNVPPSGIRKIVIA 1089
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAET ITI DI V+D GK + FD K I+ L +I+ +NA QRRGRAGR
Sbjct: 1090 TNIAETGITIPDITCVIDTGKHREMRFDEKRQISHLVEAFIAKSNAAQRRGRAGR 1144
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 26/39 (66%)
Query: 46 YQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
YQ ML R +LP Q R +L+ + ++Q+ V+SGETG G
Sbjct: 720 YQSMLAQRHQLPIAQYRQEILNTLDSSQVLVLSGETGCG 758
>gi|465971234|gb|EMP32660.1| Putative ATP-dependent RNA helicase DHX57 [Chelonia mydas]
Length = 1228
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 56/118 (47%), Positives = 79/118 (66%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN---SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
+L+FLPG I L+ + ++ FN S R + PLHS L + Q+S+F PP GV KI
Sbjct: 724 VLIFLPGLAEIKMLYEQLQSNALFNNRHSKRCVVYPLHSSLSSEDQQSVFLKPPVGVTKI 783
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+++TNIAETSITIDD+V+V+D GK K +D + +L+ ++S ANA QR+GRAGR
Sbjct: 784 IISTNIAETSITIDDVVFVIDSGKMKEKRYDPSKGMESLEDTFVSKANALQRKGRAGR 841
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 40 KLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHLDFITLKRSET 99
K SR +Q ML+ R+ LP+++ R+ +LD++ +Q+ V+SG TG G + L S
Sbjct: 402 KQSSRHFQSMLQERQNLPAWEERETILDLLTKHQVLVVSGMTGCGKTTQIPQFILDAS-L 460
Query: 100 QQYPNDVLNML 110
+ PN V N++
Sbjct: 461 RGPPNRVANIV 471
Score = 42.0 bits (97), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 8/71 (11%)
Query: 317 VLNMLKDPELEGVNNDVIFSLLQHICTTQR---PGAILVFLPGWDTINSLHRSMCQSSFF 373
VL + +L+ VN ++I SLL+ I + + PGA+L+FLPG I L+ + ++ F
Sbjct: 688 VLKTMAAMDLDKVNLELIESLLEWIVSGKHSYPPGAVLIFLPGLAEIKMLYEQLQSNALF 747
Query: 374 NS-----CLLY 379
N+ C++Y
Sbjct: 748 NNRHSKRCVVY 758
>gi|149029549|gb|EDL84747.1| similar to YTH domain containing 2 (predicted) [Rattus norvegicus]
Length = 818
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 79/117 (67%), Gaps = 3/117 (2%)
Query: 190 LVFLPGWDTINSLH-RSMCQSSFF--NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIV 246
++FLPG+D I L R + F N+ R+Q+ LHS + T QK + PP GVRKI+
Sbjct: 14 VIFLPGYDEIVGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKII 73
Query: 247 LATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
L+TNIAETSIT++D+V+V+D GK K +FD + + LK WIS A+A QR+GRAGR
Sbjct: 74 LSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGR 130
>gi|392571642|gb|EIW64814.1| P-loop containing nucleoside triphosphate hydrolase protein [Trametes
versicolor FP-101664 SS1]
Length = 1455
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 58/116 (50%), Positives = 77/116 (66%), Gaps = 1/116 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQ-SSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
+LVF+PG I L+ + + SF + RF+I PLHS + + Q ++F+ PP GVRKIV+
Sbjct: 927 VLVFMPGMGEIRRLNDVLTEHRSFGSEDRFRIYPLHSTISSEQQGAVFDIPPPGVRKIVI 986
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
ATNIAET ITI DI V+D GK + FD K I+ L +I+ +NA QRRGRAGR
Sbjct: 987 ATNIAETGITIPDITCVIDTGKHREMRFDEKRQISRLIETYIARSNAAQRRGRAGR 1042
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 4/54 (7%)
Query: 35 KEMIRKLQSRR----YQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+++I Q+R+ YQ+ML R LP R +L ++ +QI V+SGETG G
Sbjct: 601 EQIIADFQARQASPAYQDMLHQRNTLPMAHYRQDLLSLLEMSQILVLSGETGCG 654
>gi|322705703|gb|EFY97287.1| DEAD/DEAH box helicase, putative [Metarhizium anisopliae ARSEF 23]
Length = 1518
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 57/115 (49%), Positives = 77/115 (66%), Gaps = 5/115 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL+FLPG IN C + + + ++PLH+ L T QK +F+ PP G RK+V+A
Sbjct: 845 ILIFLPGVGEINH----AC-NHLRSINSLHVLPLHASLETREQKRVFSKPPPGKRKVVVA 899
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TN+AETSITIDDI+ V+D GK K ++FD ++N+ L+ W S A KQRRGRAGR
Sbjct: 900 TNVAETSITIDDIIAVIDSGKVKETSFDAQNNMRKLEETWASRAACKQRRGRAGR 954
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 43/57 (75%)
Query: 28 VLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
V D+ K+E +R+ +S +++ML R++LP++QMR+ ++ V +N +T+ISGETGSG
Sbjct: 556 VSDSKTKEEWLRRQESSAWKDMLSKRQRLPAWQMREKIVKTVNDNHVTIISGETGSG 612
>gi|466000901|gb|EMP41365.1| ATP-dependent RNA helicase DHX29 [Chelonia mydas]
Length = 1202
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 77/115 (66%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL+FLPG I L+ + F R+++I LHS+L T Q + F PP GVRKIVLA
Sbjct: 702 ILIFLPGLAHIQQLYDLISSDRRFTRDRYRLIALHSILSTQDQAAAFTLPPSGVRKIVLA 761
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAET ITI D+V+V+D G+TK + + +++L+ ++S A+A QR+GRAGR
Sbjct: 762 TNIAETGITIPDVVFVIDTGRTKENRYHESSQMSSLEETFVSKASALQRQGRAGR 816
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 37/49 (75%), Gaps = 1/49 (2%)
Query: 37 MIRKLQSR-RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+ +K QS RYQ +L+ R++LP ++ R ++++ ++ +++ V++GETGSG
Sbjct: 432 LFKKFQSSCRYQRLLKERQQLPVFKHRHSIIETLKKHRVVVVAGETGSG 480
>gi|302698459|ref|XP_003038908.1| hypothetical protein SCHCODRAFT_65013 [Schizophyllum commune H4-8]
gi|300112605|gb|EFJ04006.1| hypothetical protein SCHCODRAFT_65013 [Schizophyllum commune H4-8]
Length = 1448
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 58/115 (50%), Positives = 74/115 (64%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL+F+PG + I L+ + + S F I PLHS L + +Q S+FN PP G RKIV+A
Sbjct: 919 ILIFMPGINEIRRLNDMLTEHRMLGSDDFIIYPLHSTLSSEAQSSVFNVPPPGQRKIVIA 978
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAET ITI DI V+D GK + FD K I+ L +I+ +NA QRRGRAGR
Sbjct: 979 TNIAETGITIPDITCVIDTGKHREMRFDEKRQISRLIETFIAKSNAAQRRGRAGR 1033
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 10/68 (14%)
Query: 27 PVLDA------AFKKEMIRKLQSRR----YQEMLEARKKLPSYQMRDAVLDMVRNNQITV 76
P++DA AF +++ + R+ YQEML R +LP R +L + +Q+ V
Sbjct: 576 PIVDAPASSNDAFSEQLQESFRVRQASSSYQEMLTYRNQLPIANYRHEILSALDASQVLV 635
Query: 77 ISGETGSG 84
+SGETG G
Sbjct: 636 LSGETGCG 643
>gi|426384725|ref|XP_004058905.1| PREDICTED: ATP-dependent RNA helicase DHX29 [Gorilla gorilla
gorilla]
Length = 1326
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 77/115 (66%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+L+FLPG I L+ + F S R+++I LHS+L T Q + F PP GVRKIVLA
Sbjct: 827 VLIFLPGLAHIQQLYDLLSNDRRFYSERYKVIALHSILSTQDQAAAFTLPPPGVRKIVLA 886
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAET ITI D+V+V+D G+TK + + +++L ++S A+A QR+GRAGR
Sbjct: 887 TNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGR 941
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 40/51 (78%), Gaps = 1/51 (1%)
Query: 35 KEMIRKLQSR-RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+ + RKLQS +YQ +L+ R++LP ++ RD++++ ++ +++ V++GETGSG
Sbjct: 507 RNLFRKLQSTPKYQRLLKERQQLPVFKHRDSIVETLKRHRVVVVAGETGSG 557
>gi|401888985|gb|EJT52928.1| DEAH RNA helicase [Trichosporon asahii var. asahii CBS 2479]
Length = 1572
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 77/124 (62%), Gaps = 9/124 (7%)
Query: 189 ILVFLPGWDTI---------NSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPP 239
+LVFLPGWD I NS + +F ++S+F + LHS +P Q+ +F PP
Sbjct: 889 VLVFLPGWDEIKKVADILLDNSGKYPLLGLNFNDASQFSVHYLHSTIPAAEQREVFKPPP 948
Query: 240 EGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRG 299
GVR+I+LATNIAETS+TI D+VYVVD + K +D ++++L W+ +N QR G
Sbjct: 949 PGVRRIILATNIAETSVTIPDVVYVVDSARVKEKRYDPDRHMSSLVSAWVGSSNLGQRAG 1008
Query: 300 RAGR 303
RAGR
Sbjct: 1009 RAGR 1012
>gi|390363998|ref|XP_793172.3| PREDICTED: ATP-dependent RNA helicase DHX29-like [Strongylocentrotus
purpuratus]
Length = 1430
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 99/166 (59%), Gaps = 16/166 (9%)
Query: 178 VKLLRSMLVVP--------ILVFLPGWDTINSLHRSM-CQSSFFNSSRFQIIPLHSMLPT 228
V+LL + VP +L+F+PG I L+ + +F + R+ ++ LHS+L +
Sbjct: 886 VELLSYLEQVPTFKCVEGAVLIFMPGLAQIQQLYEMLQADPNFSKTDRYTLLALHSVLSS 945
Query: 229 VSQKSIFNTPPEGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEW 288
Q + F PP GVRKIV+ATNIAET ITI D+V+V+D GK K + ++ + +++L+ +
Sbjct: 946 DDQSAAFGIPPPGVRKIVIATNIAETGITIPDVVFVIDAGKVKENRYNERSQMSSLEEMY 1005
Query: 289 ISLANAKQRRGRAGRT-----LKRSETQQYPNDVLNMLKDPELEGV 329
+S A+AKQR+GRAGR + Q+Y DVL PE++ V
Sbjct: 1006 VSKASAKQRQGRAGRVREGFCFRLYTKQRY--DVLRSFTQPEIQRV 1049
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 45 RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
++ +LE R+ LP +Q RD VL+ + + I +++GETGSG
Sbjct: 595 QHGRLLEKRQTLPVFQHRDQVLERIYKDSIVIVAGETGSG 634
>gi|332233569|ref|XP_003265976.1| PREDICTED: ATP-dependent RNA helicase DHX29 [Nomascus leucogenys]
Length = 1369
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 77/115 (66%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+L+FLPG I L+ + F S R+++I LHS+L T Q + F PP GVRKIVLA
Sbjct: 870 VLIFLPGLAHIQQLYDLLSNDRRFYSERYKVIALHSILSTQDQAAAFTLPPPGVRKIVLA 929
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAET ITI D+V+V+D G+TK + + +++L ++S A+A QR+GRAGR
Sbjct: 930 TNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGR 984
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 40/51 (78%), Gaps = 1/51 (1%)
Query: 35 KEMIRKLQSR-RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+ + RKLQS +YQ +L+ R++LP ++ RD++++ ++ +++ V++GETGSG
Sbjct: 550 RNLFRKLQSTPKYQRLLKERQQLPVFKHRDSIVETLKRHRVVVVAGETGSG 600
>gi|444725110|gb|ELW65689.1| ATP-dependent RNA helicase DHX29 [Tupaia chinensis]
Length = 1404
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 77/115 (66%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+L+FLPG I L+ + F S R+++I LHS+L T Q + F PP GVRKIVLA
Sbjct: 920 VLIFLPGLAHIQQLYDLLSNDRRFYSERYKVIALHSILSTQDQAAAFTLPPPGVRKIVLA 979
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAET ITI D+V+V+D G+TK + + +++L ++S A+A QR+GRAGR
Sbjct: 980 TNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGR 1034
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 40/51 (78%), Gaps = 1/51 (1%)
Query: 35 KEMIRKLQSR-RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+ + RKLQS +YQ +L+ R++LP ++ RD++++ ++ +++ V++GETGSG
Sbjct: 600 RNLFRKLQSTPKYQRLLKERQELPVFKHRDSIVETLKRHRVVVVAGETGSG 650
>gi|297840689|ref|XP_002888226.1| helicase domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297334067|gb|EFH64485.1| helicase domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 1458
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/150 (42%), Positives = 89/150 (59%), Gaps = 11/150 (7%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQ-IIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
IL+FLPG I L + S F ++PLHS + + Q+ +F PP+G+RK++
Sbjct: 917 ILIFLPGVSEIYMLLDRIAASYRFRGPAADWLLPLHSSIASTEQRKVFLRPPKGIRKVIA 976
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR---- 303
ATNIAETSITIDD+VYV+D GK K + ++ + ++++ +WIS ANA+QR GRAGR
Sbjct: 977 ATNIAETSITIDDVVYVIDSGKHKENRYNPQKKLSSMVEDWISQANARQRTGRAGRVKPG 1036
Query: 304 ------TLKRSETQQYPNDVLNMLKDPELE 327
T R E P V ML+ P +E
Sbjct: 1037 ICFSLYTRYRFEKLMRPYQVPEMLRMPLVE 1066
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 35/53 (66%)
Query: 32 AFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+ +++ K ++++Y++ML+ R LP ++++ +L ++ + V+ GETGSG
Sbjct: 589 SLQRKQENKKRTQKYKDMLKTRTALPISEVKNGILQHLKEKDVLVVCGETGSG 641
>gi|119575313|gb|EAW54918.1| DEAH (Asp-Glu-Ala-His) box polypeptide 29, isoform CRA_d [Homo
sapiens]
Length = 1224
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 77/115 (66%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+L+FLPG I L+ + F S R+++I LHS+L T Q + F PP GVRKIVLA
Sbjct: 870 VLIFLPGLAHIQQLYDLLSNDRRFYSERYKVIALHSILSTQDQAAAFTLPPPGVRKIVLA 929
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAET ITI D+V+V+D G+TK + + +++L ++S A+A QR+GRAGR
Sbjct: 930 TNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGR 984
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 41/51 (80%), Gaps = 1/51 (1%)
Query: 35 KEMIRKLQSR-RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+ + RKLQS +YQ++L+ R++LP ++ RD++++ ++ +++ V++GETGSG
Sbjct: 550 RNLFRKLQSTPKYQKLLKERQQLPVFKHRDSIVETLKRHRVVVVAGETGSG 600
>gi|397514269|ref|XP_003827414.1| PREDICTED: ATP-dependent RNA helicase DHX29 [Pan paniscus]
Length = 1373
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 77/115 (66%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+L+FLPG I L+ + F S R+++I LHS+L T Q + F PP GVRKIVLA
Sbjct: 874 VLIFLPGLAHIQQLYDLLSNDRRFYSERYKVIALHSILSTQDQAAAFTLPPPGVRKIVLA 933
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAET ITI D+V+V+D G+TK + + +++L ++S A+A QR+GRAGR
Sbjct: 934 TNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGR 988
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 41/51 (80%), Gaps = 1/51 (1%)
Query: 35 KEMIRKLQSR-RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+ + RKLQS +YQ++L+ R++LP ++ RD++++ ++ +++ V++GETGSG
Sbjct: 554 RNLFRKLQSTPKYQKLLKERQQLPVFKHRDSIVETLKRHRVVVVAGETGSG 604
>gi|33440541|gb|AAH56219.1| DEAH (Asp-Glu-Ala-His) box polypeptide 29 [Homo sapiens]
Length = 1369
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 77/115 (66%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+L+FLPG I L+ + F S R+++I LHS+L T Q + F PP GVRKIVLA
Sbjct: 870 VLIFLPGLAHIQQLYDLLSNDRRFYSERYKVIALHSILSTQDQAAAFTLPPPGVRKIVLA 929
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAET ITI D+V+V+D G+TK + + +++L ++S A+A QR+GRAGR
Sbjct: 930 TNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGR 984
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 41/51 (80%), Gaps = 1/51 (1%)
Query: 35 KEMIRKLQSR-RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+ + RKLQS +YQ++L+ R++LP ++ RD++++ ++ +++ V++GETGSG
Sbjct: 550 RNLFRKLQSTPKYQKLLKERQQLPVFKHRDSIVETLKRHRVVVVAGETGSG 600
>gi|291395363|ref|XP_002714081.1| PREDICTED: DEAH (Asp-Glu-Ala-His) box polypeptide 29 [Oryctolagus
cuniculus]
Length = 1366
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 77/115 (66%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+L+FLPG I L+ + F S R+++I LHS+L T Q + F PP GVRKIVLA
Sbjct: 868 VLIFLPGLAHIQQLYDLLSNDRRFYSERYKVIALHSILSTQDQAAAFTLPPPGVRKIVLA 927
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAET ITI D+V+V+D G+TK + + +++L ++S A+A QR+GRAGR
Sbjct: 928 TNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGR 982
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 40/51 (78%), Gaps = 1/51 (1%)
Query: 35 KEMIRKLQSR-RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+ + RKLQS +YQ +L+ R++LP ++ R+++++ ++ +++ V++GETGSG
Sbjct: 548 RNLFRKLQSSPKYQRLLKERQQLPVFKHRESIVETLKRHRVVVVAGETGSG 598
>gi|114600256|ref|XP_001147019.1| PREDICTED: ATP-dependent RNA helicase DHX29 isoform 7 [Pan
troglodytes]
Length = 1371
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 77/115 (66%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+L+FLPG I L+ + F S R+++I LHS+L T Q + F PP GVRKIVLA
Sbjct: 872 VLIFLPGLAHIQQLYDLLSNDRRFYSERYKVIALHSILSTQDQAAAFTLPPPGVRKIVLA 931
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAET ITI D+V+V+D G+TK + + +++L ++S A+A QR+GRAGR
Sbjct: 932 TNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGR 986
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 41/51 (80%), Gaps = 1/51 (1%)
Query: 35 KEMIRKLQSR-RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+ + RKLQS +YQ++L+ R++LP ++ RD++++ ++ +++ V++GETGSG
Sbjct: 552 RNLFRKLQSTPKYQKLLKERQQLPVFKHRDSIVETLKRHRVVVVAGETGSG 602
>gi|25989134|gb|AAK64516.1| nucleic acid helicase DDXx [Homo sapiens]
Length = 1369
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 77/115 (66%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+L+FLPG I L+ + F S R+++I LHS+L T Q + F PP GVRKIVLA
Sbjct: 870 VLIFLPGLAHIQQLYDLLSNDRRFYSERYKVIALHSILSTQDQAAAFTLPPPGVRKIVLA 929
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAET ITI D+V+V+D G+TK + + +++L ++S A+A QR+GRAGR
Sbjct: 930 TNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGR 984
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 41/51 (80%), Gaps = 1/51 (1%)
Query: 35 KEMIRKLQSR-RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+ + RKLQS +YQ++L+ R++LP ++ RD++++ ++ +++ V++GETGSG
Sbjct: 550 RNLFRKLQSTPKYQKLLKERQQLPVFKHRDSIVETLKRHRVVVVAGETGSG 600
>gi|67782362|ref|NP_061903.2| ATP-dependent RNA helicase DHX29 [Homo sapiens]
gi|110278938|sp|Q7Z478.2|DHX29_HUMAN RecName: Full=ATP-dependent RNA helicase DHX29; AltName: Full=DEAH
box protein 29; AltName: Full=Nucleic acid helicase DDXx
gi|119575312|gb|EAW54917.1| DEAH (Asp-Glu-Ala-His) box polypeptide 29, isoform CRA_c [Homo
sapiens]
gi|307686369|dbj|BAJ21115.1| DEAH (Asp-Glu-Ala-His) box polypeptide 29 [synthetic construct]
Length = 1369
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 77/115 (66%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+L+FLPG I L+ + F S R+++I LHS+L T Q + F PP GVRKIVLA
Sbjct: 870 VLIFLPGLAHIQQLYDLLSNDRRFYSERYKVIALHSILSTQDQAAAFTLPPPGVRKIVLA 929
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAET ITI D+V+V+D G+TK + + +++L ++S A+A QR+GRAGR
Sbjct: 930 TNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGR 984
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 41/51 (80%), Gaps = 1/51 (1%)
Query: 35 KEMIRKLQSR-RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+ + RKLQS +YQ++L+ R++LP ++ RD++++ ++ +++ V++GETGSG
Sbjct: 550 RNLFRKLQSTPKYQKLLKERQQLPVFKHRDSIVETLKRHRVVVVAGETGSG 600
>gi|402871556|ref|XP_003899725.1| PREDICTED: ATP-dependent RNA helicase DHX29 [Papio anubis]
Length = 1367
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 77/115 (66%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+L+FLPG I L+ + F S R+++I LHS+L T Q + F PP GVRKIVLA
Sbjct: 868 VLIFLPGLAHIQQLYDLLSNDRRFYSERYKVIALHSILSTQDQAAAFTLPPPGVRKIVLA 927
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAET ITI D+V+V+D G+TK + + +++L ++S A+A QR+GRAGR
Sbjct: 928 TNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGR 982
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 41/51 (80%), Gaps = 1/51 (1%)
Query: 35 KEMIRKLQSR-RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+ + RKLQS +YQ++L+ R++LP ++ RD++++ ++ +++ V++GETGSG
Sbjct: 548 RNLFRKLQSTPKYQKLLKERQQLPVFKHRDSIVETLKRHRVVVVAGETGSG 598
>gi|395818814|ref|XP_003782810.1| PREDICTED: ATP-dependent RNA helicase DHX29 [Otolemur garnettii]
Length = 1368
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 77/115 (66%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+L+FLPG I L+ + F S R+++I LHS+L T Q + F PP GVRKIVLA
Sbjct: 868 VLIFLPGLAHIQQLYDLLSNDRRFYSERYKVIALHSILSTQDQAAAFTLPPPGVRKIVLA 927
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAET ITI D+V+V+D G+TK + + +++L ++S A+A QR+GRAGR
Sbjct: 928 TNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGR 982
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 40/51 (78%), Gaps = 1/51 (1%)
Query: 35 KEMIRKLQ-SRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+ + RKLQ + +YQ +L+ R++LP ++ RD++++ ++ +++ V++GETGSG
Sbjct: 548 RNLFRKLQRTPKYQRLLKERQQLPVFKHRDSIVETLKRHRVVVVAGETGSG 598
>gi|478258636|gb|ENN78686.1| hypothetical protein YQE_04858, partial [Dendroctonus ponderosae]
Length = 1123
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/115 (46%), Positives = 76/115 (66%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPGW+ I ++ + + F SS++ I+PLHS +P Q+ +F P V K++LA
Sbjct: 629 VLVFLPGWNLIFAMLKHLQNHPIFGSSQYMIMPLHSQIPREDQRKVFLPVPASVTKVILA 688
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITIDD+V+V+D K K+ F +N+ + W S N +QR+GRAGR
Sbjct: 689 TNIAETSITIDDVVFVIDSCKAKIKMFTSHNNMTSYATVWGSRTNLEQRKGRAGR 743
>gi|346974552|gb|EGY18004.1| pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43
[Verticillium dahliae VdLs.17]
Length = 1357
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/140 (45%), Positives = 86/140 (61%), Gaps = 6/140 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPG I+ R++ ++S ++PLH+ L T QK +F P G RK+V+A
Sbjct: 851 ILVFLPGVAEISQTCRALS-----SNSSLHVLPLHASLETREQKRVFARAPPGKRKVVVA 905
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TN+AETSITIDDIV VVD GK K + +D ++N+ L+ W S A KQRRGRAGR
Sbjct: 906 TNVAETSITIDDIVAVVDSGKVKETTYDAQNNMRKLEEMWASRAACKQRRGRAGRVQAGK 965
Query: 309 ETQQYPNDV-LNMLKDPELE 327
+ Y ++ + M + PE E
Sbjct: 966 CYKLYTRNLEMQMAERPEPE 985
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 36/51 (70%)
Query: 34 KKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+ + +++ ++ Y++M+ R+ LP++Q+ + ++ V N +T+ISGETGSG
Sbjct: 571 RDQWLKRQETPEYKKMMAKRQSLPAWQVHEKIIQTVAQNHVTIISGETGSG 621
>gi|109077251|ref|XP_001099143.1| PREDICTED: ATP-dependent RNA helicase DHX29 isoform 5 [Macaca
mulatta]
Length = 1367
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 77/115 (66%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+L+FLPG I L+ + F S R+++I LHS+L T Q + F PP GVRKIVLA
Sbjct: 868 VLIFLPGLAHIQQLYDLLSNDRRFYSERYKVIALHSILSTQDQAAAFTLPPPGVRKIVLA 927
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAET ITI D+V+V+D G+TK + + +++L ++S A+A QR+GRAGR
Sbjct: 928 TNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGR 982
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 41/51 (80%), Gaps = 1/51 (1%)
Query: 35 KEMIRKLQSR-RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+ + RKLQS +YQ++L+ R++LP ++ RD++++ ++ +++ V++GETGSG
Sbjct: 548 RNLFRKLQSTPKYQKLLKERQQLPVFKHRDSIVETLKRHRVVVVAGETGSG 598
>gi|119575311|gb|EAW54916.1| DEAH (Asp-Glu-Ala-His) box polypeptide 29, isoform CRA_b [Homo
sapiens]
Length = 1268
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 77/115 (66%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+L+FLPG I L+ + F S R+++I LHS+L T Q + F PP GVRKIVLA
Sbjct: 870 VLIFLPGLAHIQQLYDLLSNDRRFYSERYKVIALHSILSTQDQAAAFTLPPPGVRKIVLA 929
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAET ITI D+V+V+D G+TK + + +++L ++S A+A QR+GRAGR
Sbjct: 930 TNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGR 984
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 41/51 (80%), Gaps = 1/51 (1%)
Query: 35 KEMIRKLQSR-RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+ + RKLQS +YQ++L+ R++LP ++ RD++++ ++ +++ V++GETGSG
Sbjct: 550 RNLFRKLQSTPKYQKLLKERQQLPVFKHRDSIVETLKRHRVVVVAGETGSG 600
>gi|403267580|ref|XP_003925901.1| PREDICTED: ATP-dependent RNA helicase DHX29 [Saimiri boliviensis
boliviensis]
Length = 1366
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 77/115 (66%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+L+FLPG I L+ + F S R+++I LHS+L T Q + F PP GVRKIVLA
Sbjct: 867 VLIFLPGLAHIQQLYDLLSNDRRFYSERYRVIALHSILSTQDQAAAFTLPPPGVRKIVLA 926
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAET ITI D+V+V+D G+TK + + +++L ++S A+A QR+GRAGR
Sbjct: 927 TNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGR 981
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 40/51 (78%), Gaps = 1/51 (1%)
Query: 35 KEMIRKLQSR-RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+ + RKLQS +YQ +L+ R++LP ++ RD++++ ++ +++ V++GETGSG
Sbjct: 547 RNLFRKLQSTPKYQRLLKERQQLPVFKHRDSIVETLKRHRVVVVAGETGSG 597
>gi|478497069|ref|XP_004422873.1| PREDICTED: ATP-dependent RNA helicase DHX29 [Ceratotherium simum
simum]
Length = 1369
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 77/115 (66%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+L+FLPG I L+ + F S R+++I LHS+L T Q + F PP GVRKIVLA
Sbjct: 869 VLIFLPGLAHIQQLYDLLSTDRRFFSERYKVIALHSILSTQDQAAAFTLPPSGVRKIVLA 928
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAET ITI D+V+V+D G+TK + + +++L ++S A+A QR+GRAGR
Sbjct: 929 TNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGR 983
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 41/51 (80%), Gaps = 1/51 (1%)
Query: 35 KEMIRKLQSR-RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+ + RKLQS +YQ++L+ R++LP ++ R+++++ ++ +++ V++GETGSG
Sbjct: 549 RNLFRKLQSTPKYQKLLKERQQLPVFKHRNSIVETLKRHRVVVVAGETGSG 599
>gi|358389780|gb|EHK27372.1| hypothetical protein TRIVIDRAFT_73272 [Trichoderma virens Gv29-8]
Length = 1348
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/115 (50%), Positives = 78/115 (67%), Gaps = 5/115 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL+FLPG IN C ++ + S ++PLH+ L T QK +F +PP G RK+V+A
Sbjct: 847 ILIFLPGVGEINQ----AC-NNLRSISSLHVLPLHASLETKEQKRVFTSPPPGKRKVVVA 901
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TN+AETSITIDDIV V+D GK K ++FD ++N+ L+ W S A KQR+GRAGR
Sbjct: 902 TNVAETSITIDDIVVVIDSGKVKETSFDPQNNMRKLEETWASRAACKQRQGRAGR 956
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 41/57 (71%)
Query: 28 VLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
V+DA K+E +R+ + ++M+ R+ LP++QM+DA++ V N +T+ISGETGSG
Sbjct: 557 VVDARSKEEWLRRQGNPSQKDMITKRQALPAWQMQDAIVQTVNKNHVTIISGETGSG 613
>gi|395735810|ref|XP_003780662.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase DHX29
[Pongo abelii]
Length = 1324
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 77/115 (66%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+L+FLPG I L+ + F S R+++I LHS+L T Q + F PP GVRKIVLA
Sbjct: 825 VLIFLPGLAHIQQLYDLLSNDRRFYSERYKVIALHSILSTQDQAAAFTLPPPGVRKIVLA 884
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAET ITI D+V+V+D G+TK + + +++L ++S A+A QR+GRAGR
Sbjct: 885 TNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGR 939
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 40/51 (78%), Gaps = 1/51 (1%)
Query: 35 KEMIRKLQSR-RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+ + RKLQS +YQ +L+ R++LP ++ RD++++ ++ +++ V++GETGSG
Sbjct: 505 RNLFRKLQSTPKYQRLLKERQQLPVFKHRDSIVETLKRHRVVVVAGETGSG 555
>gi|384250322|gb|EIE23802.1| P-loop containing nucleoside triphosphate hydrolase protein
[Coccomyxa subellipsoidea C-169]
Length = 835
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/119 (47%), Positives = 76/119 (63%), Gaps = 4/119 (3%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSS----RFQIIPLHSMLPTVSQKSIFNTPPEGVRK 244
IL+FLPG I+ L R++ SS S +I+PLH LP Q +F G RK
Sbjct: 324 ILIFLPGAPEISKLVRALQGSSKLRSGASGQELRILPLHGSLPAKQQSRVFQKVGPGTRK 383
Query: 245 IVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
IV+ATN+AETSITIDD+V V+DCG+ K +D + +I+ L+ W S A+ +QRRGRAGR
Sbjct: 384 IVVATNVAETSITIDDVVCVIDCGRVKEIRYDAERSISRLQEMWASAASGQQRRGRAGR 442
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 310 TQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRP----GAILVFLPGWDTINSLHR 365
T QY L L + + +N +++ SL+ H+ ++Q+P AIL+FLPG I+ L R
Sbjct: 280 TPQYSAATLRSLSNVDEALINYELLESLVAHVVSSQQPDSAANAILIFLPGAPEISKLVR 339
Query: 366 SMCQSSFFNS 375
++ SS S
Sbjct: 340 ALQGSSKLRS 349
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 33/57 (57%)
Query: 41 LQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHLDFITLKRS 97
L+ R Q M AR+KLP++ R +L+ ++ ++ ++SG TG G L L+++
Sbjct: 10 LRGSRMQAMRAAREKLPAHTKRAQLLEALKRQRVVIVSGATGCGKSTQLPQYVLEQA 66
>gi|406695479|gb|EKC98784.1| DEAH RNA helicase [Trichosporon asahii var. asahii CBS 8904]
Length = 1568
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 76/124 (61%), Gaps = 9/124 (7%)
Query: 189 ILVFLPGWDTI---------NSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPP 239
+LVFLPGWD I NS + +F ++S F + LHS +P Q+ +F PP
Sbjct: 885 VLVFLPGWDEIKKVADILLDNSGKYPLLGLNFNDASEFSVHYLHSTIPAAEQREVFKPPP 944
Query: 240 EGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRG 299
GVR+I+LATNIAETS+TI D+VYVVD + K +D ++++L W+ +N QR G
Sbjct: 945 PGVRRIILATNIAETSVTIPDVVYVVDSARVKEKRYDPDRHMSSLVSAWVGSSNLGQRAG 1004
Query: 300 RAGR 303
RAGR
Sbjct: 1005 RAGR 1008
>gi|52545949|emb|CAH56172.1| hypothetical protein [Homo sapiens]
Length = 1287
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 77/115 (66%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+L+FLPG I L+ + F S R+++I LHS+L T Q + F PP GVRKIVLA
Sbjct: 788 VLIFLPGLAHIQQLYGLLSNDRRFYSERYKVIALHSILSTQDQAAAFTLPPPGVRKIVLA 847
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAET ITI D+V+V+D G+TK + + +++L ++S A+A QR+GRAGR
Sbjct: 848 TNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGR 902
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 41/51 (80%), Gaps = 1/51 (1%)
Query: 35 KEMIRKLQSR-RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+ + RKLQS +YQ++L+ R++LP ++ RD++++ ++ +++ V++GETGSG
Sbjct: 468 RNLFRKLQSTPKYQKLLKERQQLPVFKHRDSIVETLKRHRVVVVAGETGSG 518
>gi|488596755|ref|XP_004483551.1| PREDICTED: ATP-dependent RNA helicase DHX29 [Dasypus novemcinctus]
Length = 1249
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 77/115 (66%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+L+FLPG I L+ + F S R+++I LHS+L T Q + F PP GVRKIVLA
Sbjct: 749 VLIFLPGLAHIQQLYDFLSTDRRFYSERYKVIALHSILSTQDQAAAFTLPPPGVRKIVLA 808
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAET ITI D+V+V+D G+TK + + +++L ++S A+A QR+GRAGR
Sbjct: 809 TNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGR 863
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
Query: 35 KEMIRKLQSR-RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+ + RKLQS +YQ +L+ R++LP ++ R+ +++ ++ +++ V++GETGSG
Sbjct: 429 RNLFRKLQSTPKYQRLLKERQQLPVFKHRNLIVETLKRHRVVVVAGETGSG 479
>gi|507615594|ref|XP_004623280.1| PREDICTED: ATP-dependent RNA helicase DHX29 [Octodon degus]
Length = 1367
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/115 (48%), Positives = 77/115 (66%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+L+FLPG I L+ + F S R+++I LHS+L T Q + F PP GVRKIVLA
Sbjct: 868 VLIFLPGLAHIQQLYDLLSNDRRFYSERYKVIALHSILSTQDQAAAFVPPPAGVRKIVLA 927
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAET ITI D+V+V+D G+TK + + +++L +IS A+A QR+GRAGR
Sbjct: 928 TNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFISKASALQRQGRAGR 982
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 40/51 (78%), Gaps = 1/51 (1%)
Query: 35 KEMIRKLQSR-RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+ + RKLQS +YQ +L+ R++LP ++ RDA+++ ++ +++ V++GETGSG
Sbjct: 549 RNLFRKLQSTPKYQRLLKDRQQLPVFKHRDAIVETLKRHRVVVVAGETGSG 599
>gi|319803056|ref|NP_001188373.1| ATP-dependent RNA helicase A [Danio rerio]
Length = 1270
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/115 (44%), Positives = 77/115 (66%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPGW+ I S+ + + + F +++I+PLHS +P Q+ +F P+GV K++L+
Sbjct: 659 VLVFLPGWNLIYSMQKHLEMNPHFGGHQYRILPLHSQIPREEQRRVFEPVPDGVTKVILS 718
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+D+V+V+D K K+ F +N+ W S N +QR+GRAGR
Sbjct: 719 TNIAETSITINDVVFVLDSCKQKVKLFTSHNNMTNYATVWASKTNLEQRKGRAGR 773
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 30/44 (68%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
++I +LL++I T + PGA+LVFLPGW+ I S+ + + + F
Sbjct: 641 ELIEALLKYIETLEVPGAVLVFLPGWNLIYSMQKHLEMNPHFGG 684
>gi|72389805|ref|XP_845197.1| ATP-dependent DEAH-box RNA helicase [Trypanosoma brucei TREU927]
gi|62360056|gb|AAX80478.1| ATP-dependent DEAH-box RNA helicase, putative [Trypanosoma brucei]
gi|70801732|gb|AAZ11638.1| ATP-dependent DEAH-box RNA helicase, putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
Length = 1251
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 76/115 (66%), Gaps = 2/115 (1%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGW I+ + + S+ S ++ LHS L Q+ +F P+G RK+VL+
Sbjct: 574 ILVFLPGWQAISRVANMIRMSNV--SRELSVLQLHSSLTAEEQRRVFYRAPKGYRKVVLS 631
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITIDDIVYVVD TK+S++D N + L E+IS AN QRRGRAGR
Sbjct: 632 TNIAETSITIDDIVYVVDSCLTKVSSYDPAANTSALTAEFISRANGLQRRGRAGR 686
Score = 39.7 bits (91), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 29/45 (64%)
Query: 40 KLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
K+ RY E+ R LP+++ + A+L+ V+ + I VISG+TG G
Sbjct: 275 KVPRHRYAELQRFRVTLPAFRQQGAILNAVKISDIVVISGDTGCG 319
>gi|116206782|ref|XP_001229200.1| hypothetical protein CHGG_02684 [Chaetomium globosum CBS 148.51]
gi|88183281|gb|EAQ90749.1| hypothetical protein CHGG_02684 [Chaetomium globosum CBS 148.51]
Length = 1355
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/115 (50%), Positives = 77/115 (66%), Gaps = 5/115 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL+FLPG IN C ++ ++ ++PLH+ L T QK +F T P+G RK+V+A
Sbjct: 850 ILIFLPGVAEINR----AC-NALRSAPSLHVLPLHASLETREQKKVFATAPQGRRKVVVA 904
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TN+AETSITIDDIV V+D G+ K +FD +N+ L+ W SLA KQRRGRAGR
Sbjct: 905 TNVAETSITIDDIVAVIDSGRVKEISFDPANNMRKLEETWASLAACKQRRGRAGR 959
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 80/344 (23%), Positives = 137/344 (39%), Gaps = 55/344 (15%)
Query: 34 KKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHLDFIT 93
++E + + ++ Y++ML R++LP++Q+R V+ V NQ+T+ISGETGSG
Sbjct: 557 RQEWVARTEALNYKKMLSQRERLPAWQVRADVIRTVSENQVTIISGETGSG--------- 607
Query: 94 LKRSETQQYPNDVLNMLKDPELEGVNNDVIFS-------LLQHICTTQRPGAILVYCTYT 146
K +++ Q+ +L+ L L G N ++ L +R + YT
Sbjct: 608 -KSTQSVQF---ILDDLYSKGLGGGANIIVTQPRRISALGLADRVAEERCTQVGQEVGYT 663
Query: 147 FMG---VSPMK--VFFCKNVLQRLMKGVGANSPKRWVKLLRSMLVVPILVFLPGWDTINS 201
G SP+ F VL R ++ G L VV V DT
Sbjct: 664 IRGESRTSPITKITFVTTGVLLRRLQTSGGRVEDVVSSLADVSHVVVDEVHERSLDTDFL 723
Query: 202 LHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLATNIAETSITIDDI 261
L S+ + + ++I + + L S + F + V V I+ + + D
Sbjct: 724 L--SIIRDVLYKRQDLKLILMSATLDAASFRDYFMADQQNV--TVGLVEISGRTYPVQDY 779
Query: 262 VYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRSETQQYPNDVLNML 321
Y+ D +M+ F V + G + + N V+ L
Sbjct: 780 -YLDDV--IRMTGFSVGNRYDYYDD---------------GASTPSGDQADPINKVIQKL 821
Query: 322 KDPELEGVNNDVIF----SLLQHICTTQRPGAILVFLPGWDTIN 361
+N D++F S+ + + + Q+ G IL+FLPG IN
Sbjct: 822 G----TRINYDLLFETVKSIDEDLSSRQKLGGILIFLPGVAEIN 861
>gi|431908598|gb|ELK12191.1| ATP-dependent RNA helicase DHX29 [Pteropus alecto]
Length = 1368
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 77/115 (66%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+L+FLPG I L+ + F S R+++I LHS+L T Q + F PP GVRKIVLA
Sbjct: 868 VLIFLPGLAHIQQLYDLLSSDRRFFSERYKVIALHSILSTQDQAAAFTLPPPGVRKIVLA 927
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAET ITI D+V+V+D G+TK + + +++L ++S A+A QR+GRAGR
Sbjct: 928 TNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGR 982
Score = 45.4 bits (106), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 37/46 (80%), Gaps = 1/46 (2%)
Query: 40 KLQSR-RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
KLQS +YQ +L+ R++LP ++ R+++++ ++ +++ V++GETGSG
Sbjct: 553 KLQSTPKYQRLLKERQQLPVFKHRNSIVETLKRHRVVVVAGETGSG 598
>gi|299755543|ref|XP_001828731.2| DEAH box polypeptide 36 [Coprinopsis cinerea okayama7#130]
gi|298411272|gb|EAU92997.2| DEAH box polypeptide 36 [Coprinopsis cinerea okayama7#130]
Length = 1505
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 78/121 (64%), Gaps = 6/121 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQS------SFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGV 242
+LVFLPGWD I + R++ Q N+S++ + LHS +P Q+ IF PP GV
Sbjct: 717 VLVFLPGWDEIMATQRALQQPLGPLPIDINNTSKYSVHLLHSTVPLQEQQVIFEPPPPGV 776
Query: 243 RKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAG 302
R+++LATNIAETS+TI D+VYVVD K K + ++ + +++ L W+ +N QR GRAG
Sbjct: 777 RRVILATNIAETSVTIPDVVYVVDSAKVKETRYEPQRHMSALVSAWVGNSNLHQRAGRAG 836
Query: 303 R 303
R
Sbjct: 837 R 837
>gi|403172739|ref|XP_003331885.2| hypothetical protein PGTG_13694 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375169978|gb|EFP87466.2| hypothetical protein PGTG_13694 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 1737
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/144 (43%), Positives = 83/144 (57%), Gaps = 10/144 (6%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL+FLP D+I L + + F +S FQI PLHS + +Q +F TPP GVRKIV++
Sbjct: 1082 ILIFLPSLDSIRKLTEILESHAIFGTSAFQIFPLHSSISNENQSLVFQTPPAGVRKIVIS 1141
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR----- 303
TNIAET ITI D+ V+D GK K +D K I+ L +I+ +N QR+GRAGR
Sbjct: 1142 TNIAETGITIPDVTCVIDSGKHKEMRYDEKRQISKLVETFIAKSNVTQRKGRAGRVQEGI 1201
Query: 304 -----TLKRSETQQYPNDVLNMLK 322
T R ET N + ML+
Sbjct: 1202 CFHLFTKHRMETHLADNPLPEMLR 1225
>gi|514766318|ref|XP_005024423.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
YTHDC2 [Anas platyrhynchos]
Length = 1357
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/123 (48%), Positives = 81/123 (65%), Gaps = 8/123 (6%)
Query: 189 ILVFLPGWDTINSLH-RSMCQSSFF--NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
IL+FLPG+D I SL R + F N+ R+Q+ LHS + T+ QK + +PP G+RKI
Sbjct: 543 ILIFLPGYDEIVSLRDRILFDDKRFADNAHRYQVFMLHSNMQTLDQKKVLRSPPSGIRKI 602
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDV-----KDNIATLKPEWISLANAKQRRGR 300
+L+TNIAETSIT++D+V+V+D GK K +FD LK WIS A+A QR+GR
Sbjct: 603 ILSTNIAETSITVNDVVFVIDSGKMKEKSFDALSCXXXXXXXCLKTVWISKASAIQRKGR 662
Query: 301 AGR 303
AGR
Sbjct: 663 AGR 665
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 26/37 (70%)
Query: 327 EGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSL 363
E V+ D+I +L +IC T GAIL+FLPG+D I SL
Sbjct: 520 EKVDLDLIMHILYNICHTSDSGAILIFLPGYDEIVSL 556
>gi|380489618|emb|CCF36581.1| helicase associated domain-containing protein [Colletotrichum
higginsianum]
Length = 1342
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/115 (50%), Positives = 76/115 (66%), Gaps = 5/115 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL+FLPG + ++R+ NS ++PLH+ L T QK +F +PP G RKIV+A
Sbjct: 838 ILIFLPG---VAEINRACGALRSINS--LHVLPLHASLETKEQKRVFTSPPSGKRKIVVA 892
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TN+AETSITIDDIV V+D GK K + +D +N+ L+ W S A KQRRGRAGR
Sbjct: 893 TNVAETSITIDDIVAVIDSGKVKETTYDPVNNMRKLEENWASQAACKQRRGRAGR 947
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 41/55 (74%)
Query: 30 DAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
D+ + E +R+ + +++M+ R+KLP++Q+R+ +++ V +N +T+ISGETGSG
Sbjct: 551 DSRTRDEWLRRTEEPAWEKMMSKRQKLPAWQVREKIINTVEHNHVTIISGETGSG 605
>gi|301615908|ref|XP_002937403.1| PREDICTED: DEAH (Asp-Glu-Ala-His) box helicase 9 [Xenopus
(Silurana) tropicalis]
Length = 1257
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/115 (44%), Positives = 77/115 (66%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPGW+ I ++ + + + F S + I+PLHS +P Q+ +F+ P+G+ K++L+
Sbjct: 655 VLVFLPGWNLIYAMQKHLEMNPHFGSHSYCILPLHSQIPRDEQRKVFDPVPDGIIKVILS 714
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+D+VYV+D K K+ F +N+ W S N +QR+GRAGR
Sbjct: 715 TNIAETSITINDVVYVIDSCKQKVKLFTSHNNMTNYATVWASKTNLEQRKGRAGR 769
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%), Gaps = 3/50 (6%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS---CLL 378
++I +LL++I T PGA+LVFLPGW+ I ++ + + + F S C+L
Sbjct: 637 ELIEALLKYIETLNVPGAVLVFLPGWNLIYAMQKHLEMNPHFGSHSYCIL 686
>gi|471564225|gb|EMR65215.1| putative pre-mrna-splicing factor atp-dependent rna helicase prp22
protein [Eutypa lata UCREL1]
Length = 1287
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 75/115 (65%), Gaps = 1/115 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPG I SL+ + FF +++ PLHS + T Q+ F PP+GVRKIVLA
Sbjct: 710 ILVFLPGIAEIRSLNDFLLGDPFFQRD-WEVYPLHSTIATEDQERAFLVPPQGVRKIVLA 768
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAET ITI D+ V+D GK + FD + ++ L +IS ANAKQRRGRAGR
Sbjct: 769 TNIAETGITIPDVTCVIDTGKHREMRFDERRQLSRLIDTFISRANAKQRRGRAGR 823
>gi|410948587|ref|XP_003981012.1| PREDICTED: ATP-dependent RNA helicase DHX29 [Felis catus]
Length = 1365
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 77/115 (66%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+L+FLPG I L+ + F S R+++I LHS+L T Q + F PP GVRKIVLA
Sbjct: 865 VLIFLPGLAHIQQLYDLLSTDRRFFSERYKVIALHSILSTQDQAAAFTLPPPGVRKIVLA 924
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAET ITI D+V+V+D G+TK + + +++L ++S A+A QR+GRAGR
Sbjct: 925 TNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGR 979
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 40/51 (78%), Gaps = 1/51 (1%)
Query: 35 KEMIRKLQSR-RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+ + RKLQS +YQ +L+ R++LP ++ R+++++ ++ +++ V++GETGSG
Sbjct: 545 RALFRKLQSTPKYQRLLKERQQLPVFKHRNSIVETLKRHRVVVVAGETGSG 595
>gi|73949721|ref|XP_535238.2| PREDICTED: ATP-dependent RNA helicase DHX29 [Canis lupus
familiaris]
Length = 1367
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 77/115 (66%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+L+FLPG I L+ + F S R+++I LHS+L T Q + F PP GVRKIVLA
Sbjct: 867 VLIFLPGLAHIQQLYDLLSTDRRFFSERYKVIALHSILSTQDQAAAFTLPPPGVRKIVLA 926
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAET ITI D+V+V+D G+TK + + +++L ++S A+A QR+GRAGR
Sbjct: 927 TNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGR 981
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 40/51 (78%), Gaps = 1/51 (1%)
Query: 35 KEMIRKLQSR-RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+ + RKLQS +YQ +L+ R++LP ++ R+++++ ++ +++ V++GETGSG
Sbjct: 547 RNLFRKLQSTPKYQRLLKERQQLPVFKHRNSIVETLKRHRVVVVAGETGSG 597
>gi|148678047|gb|EDL09994.1| mCG11938 [Mus musculus]
Length = 1056
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/119 (50%), Positives = 80/119 (67%), Gaps = 4/119 (3%)
Query: 189 ILVFLPGWDTINSLH-RSMCQSSFF--NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
IL+FLPG+D I L R + F N+ R+Q+ LHS + T QK + PP GVRKI
Sbjct: 250 ILIFLPGYDEIVGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKI 309
Query: 246 VLATNIAETSITIDDIVYVVDCGKTK-MSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+L+TNIAETSIT++D+V+V+D GK K +FD + + LK WIS A+A QR+GRAGR
Sbjct: 310 ILSTNIAETSITVNDVVFVIDSGKVKEQKSFDALNFVTMLKMVWISKASAIQRKGRAGR 368
>gi|261328587|emb|CBH11565.1| ATP-dependent DEAH-box RNA helicase, putative [Trypanosoma brucei
gambiense DAL972]
Length = 1251
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 76/115 (66%), Gaps = 2/115 (1%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGW I+ + + S+ S ++ LHS L Q+ +F P+G RK+VL+
Sbjct: 574 ILVFLPGWQAISRVANMIRMSNV--SRELSVLQLHSSLTAEEQQRVFYRAPKGYRKVVLS 631
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITIDDIVYVVD TK+S++D N + L E+IS AN QRRGRAGR
Sbjct: 632 TNIAETSITIDDIVYVVDSCLTKVSSYDPAANTSALTAEFISRANGLQRRGRAGR 686
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 29/45 (64%)
Query: 40 KLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
K+ RY E+ R LP+++ + A+L+ V+ + I VISG+TG G
Sbjct: 275 KVPRHRYAELQRFRATLPAFRQQGAILNAVKISDIVVISGDTGCG 319
>gi|148226408|ref|NP_001087383.1| ATP-dependent RNA helicase A-like protein [Xenopus laevis]
gi|71153340|sp|Q68FK8.1|DHX9_XENLA RecName: Full=ATP-dependent RNA helicase A-like protein; AltName:
Full=DEAH box protein 9; AltName: Full=Nuclear DNA
helicase II; Short=NDH II
gi|51262114|gb|AAH79701.1| MGC81010 protein [Xenopus laevis]
Length = 1262
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/115 (44%), Positives = 77/115 (66%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPGW+ I ++ + + + F S + I+PLHS +P Q+ +F+ P+G+ K++L+
Sbjct: 655 VLVFLPGWNLIYAMQKHLEMNPHFGSHSYCILPLHSQIPRDEQRKVFDPVPDGIIKVILS 714
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+D+VYV+D K K+ F +N+ W S N +QR+GRAGR
Sbjct: 715 TNIAETSITINDVVYVIDSCKQKVKLFTSHNNMTNYATVWASKTNLEQRKGRAGR 769
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%), Gaps = 3/50 (6%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS---CLL 378
++I +LL++I T PGA+LVFLPGW+ I ++ + + + F S C+L
Sbjct: 637 ELIEALLKYIETLNVPGAVLVFLPGWNLIYAMQKHLEMNPHFGSHSYCIL 686
>gi|301785409|ref|XP_002928124.1| PREDICTED: ATP-dependent RNA helicase DHX29-like [Ailuropoda
melanoleuca]
Length = 1358
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 77/115 (66%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+L+FLPG I L+ + F S R+++I LHS+L T Q + F PP GVRKIVLA
Sbjct: 859 VLIFLPGLAHIQQLYDLLSTDRRFFSERYKVIALHSILSTQDQAAAFTLPPPGVRKIVLA 918
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAET ITI D+V+V+D G+TK + + +++L ++S A+A QR+GRAGR
Sbjct: 919 TNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGR 973
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 40/51 (78%), Gaps = 1/51 (1%)
Query: 35 KEMIRKLQSR-RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+ + RKL+S +YQ +L+ R++LP ++ R+++++ ++ +++ V++GETGSG
Sbjct: 539 RNLFRKLRSTPKYQRLLKERQQLPVFKHRNSIVETLKRHRVVVVAGETGSG 589
>gi|225684152|gb|EEH22436.1| pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16
[Paracoccidioides brasiliensis Pb03]
Length = 1059
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/115 (50%), Positives = 76/115 (66%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVF+PG I L+ + FN+ ++ I LHS + + Q+S F PP+G+RKIV+A
Sbjct: 716 ILVFMPGMAEIRRLNDEILSEPLFNNRKWIIHALHSSMASEDQESAFLIPPKGLRKIVIA 775
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAET ITI DI V+D GK K+ F+ K ++ L +IS ANAKQRRGRAGR
Sbjct: 776 TNIAETGITIPDITAVIDTGKNKVMRFNEKSQLSKLVESFISRANAKQRRGRAGR 830
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 12/77 (15%)
Query: 20 RQKLLNDPVLDAAFK-------KEMIRKLQSRR-----YQEMLEARKKLPSYQMRDAVLD 67
R +N P L A + E +RKL + R + M +RK LP ++ +D +L+
Sbjct: 390 RNSGINPPFLQGASQPNQATKPAEQLRKLWTDRSSTSSFAAMESSRKTLPIWKFKDQILE 449
Query: 68 MVRNNQITVISGETGSG 84
+ NQ +I ETGSG
Sbjct: 450 TLSTNQAIIICSETGSG 466
>gi|194223883|ref|XP_001916425.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase
DHX29-like [Equus caballus]
Length = 1368
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 77/115 (66%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+L+FLPG I L+ + F S R+++I LHS+L T Q + F PP GVRKIVLA
Sbjct: 868 VLIFLPGLAHIQQLYDLLSTDRRFFSERYKVIALHSILSTQDQAAAFTLPPPGVRKIVLA 927
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAET ITI D+V+V+D G+TK + + +++L ++S A+A QR+GRAGR
Sbjct: 928 TNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGR 982
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 41/51 (80%), Gaps = 1/51 (1%)
Query: 35 KEMIRKLQSR-RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+ + RKLQS +YQ++L+ R++LP ++ R+++++ ++ +++ V++GETGSG
Sbjct: 548 RNLFRKLQSTPKYQKLLKERQQLPVFKHRNSIVETLKRHRVVVVAGETGSG 598
>gi|383854376|ref|XP_003702697.1| PREDICTED: dosage compensation regulator-like [Megachile rotundata]
Length = 1244
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 73/115 (63%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL+FLPGW+ I +L + + Q + + IIPLHS LP Q+ +F+ G KI+LA
Sbjct: 653 ILIFLPGWNLIFALMKHLQQHPIYGGVNYVIIPLHSQLPREDQRKVFDPVETGRTKIILA 712
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+D+VYV+D K KM F +N+ W S N +QR+GRAGR
Sbjct: 713 TNIAETSITINDVVYVIDSCKAKMKLFTSHNNMTNYATVWASKTNLEQRKGRAGR 767
>gi|281337520|gb|EFB13104.1| hypothetical protein PANDA_018032 [Ailuropoda melanoleuca]
Length = 1340
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 77/115 (66%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+L+FLPG I L+ + F S R+++I LHS+L T Q + F PP GVRKIVLA
Sbjct: 859 VLIFLPGLAHIQQLYDLLSTDRRFFSERYKVIALHSILSTQDQAAAFTLPPPGVRKIVLA 918
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAET ITI D+V+V+D G+TK + + +++L ++S A+A QR+GRAGR
Sbjct: 919 TNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGR 973
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 40/51 (78%), Gaps = 1/51 (1%)
Query: 35 KEMIRKLQSR-RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+ + RKL+S +YQ +L+ R++LP ++ R+++++ ++ +++ V++GETGSG
Sbjct: 539 RNLFRKLRSTPKYQRLLKERQQLPVFKHRNSIVETLKRHRVVVVAGETGSG 589
>gi|443732004|gb|ELU16896.1| hypothetical protein CAPTEDRAFT_153404 [Capitella teleta]
Length = 1258
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 81/116 (69%), Gaps = 1/116 (0%)
Query: 189 ILVFLPGWDTINSLHRSM-CQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
+LVFLPG I+ L+ + + + + +RF++I LHS+L + +Q + F+ PP GVRKIVL
Sbjct: 755 VLVFLPGLSAIHELNEMLLAERRYADPARFRLIALHSVLSSDNQSAAFDVPPPGVRKIVL 814
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
ATNIAET ITI D+V+V+DCG+ K + ++ L+ ++S A+A QR+GRAGR
Sbjct: 815 ATNIAETGITIPDVVFVIDCGRAKEIRYAEGSQLSCLEEVFVSKASASQRQGRAGR 870
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 91/399 (22%), Positives = 152/399 (38%), Gaps = 97/399 (24%)
Query: 42 QSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHLDFITLKRSETQQ 101
+S +Y ++ R+ LP + +++AV+ +R + VI+GETGSG K ++ Q
Sbjct: 452 RSDQYTRLMTTRQSLPVFALKEAVVSTLRKHPSLVIAGETGSG----------KSTQVPQ 501
Query: 102 YPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQ------------RPGAILVYCTYT--- 146
+ +L+D L+G + ++ + + I T PG C Y
Sbjct: 502 F------LLEDLILQGGHGSILVTQPRRISATSLANRVCQEIGCPGPGQRNSLCGYQIRS 555
Query: 147 -FMGVSPMKVFFCKNVLQRLMKGVGANSPKRWVKLLRSMLVVPILVFLPGWDTINSLHRS 205
+ S ++ FC + LLR +L P L + I+ +H
Sbjct: 556 DYKCSSTARLVFCTTGI-----------------LLRRLLGDPKLKGI-SHVIIDEVHER 597
Query: 206 MCQSSFFNSSRFQI------IPLHSMLPTVSQKSIFNTPPEGVRKIVLATNIAETSIT-I 258
S F ++ + L M TV + F++ G + +A + +T +
Sbjct: 598 SVDSDFLLVLLRRLLVERPSMRLVLMSATVDSER-FSSYLRGCPVLRVAGRAFDVQVTHL 656
Query: 259 DDIV----YVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRR--GRAGRTLKRSET-- 310
DI+ Y +D +D+ + P + N + + G+ G+ K S T
Sbjct: 657 PDILVNTKYTLD-----------QDSKYAINPSQLIQENETEVKVTGKQGQVHKVSATWS 705
Query: 311 --------QQYPNDVLNMLKDPELEGVNNDVIFSLLQHICT--TQRPGAILVFLPGWDTI 360
QYP V N + + VN ++I SLL I GA+LVFLPG I
Sbjct: 706 REDLSRIDHQYPLKVRNTVTRMREDLVNLELIASLLAAIEEQYADVSGAVLVFLPGLSAI 765
Query: 361 NSLHRSMCQSSFFNSCLLYEFAMVDNKPKEIITVRDCLS 399
+ L N LL E D +I + LS
Sbjct: 766 HEL----------NEMLLAERRYADPARFRLIALHSVLS 794
>gi|392597272|gb|EIW86594.1| P-loop containing nucleoside triphosphate hydrolase protein
[Coniophora puteana RWD-64-598 SS2]
Length = 1462
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/115 (50%), Positives = 76/115 (66%), Gaps = 1/115 (0%)
Query: 190 LVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
L+F+PG I ++ + + F N S F+I PLHS L T +Q S+F+ PP GVRKIV+A
Sbjct: 951 LIFMPGLGEIRKMNDILQEHPHFGNESSFRIYPLHSALSTENQTSVFDIPPPGVRKIVIA 1010
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAET ITI DI V+D GK + FD K I+ L +++ +NA QRRGRAGR
Sbjct: 1011 TNIAETGITIPDITCVIDSGKQREMRFDEKRQISRLIETFVAKSNAAQRRGRAGR 1065
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 32/50 (64%)
Query: 35 KEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+E+ + +S+ YQEML R LP + R +++ + +QI V+SGETG G
Sbjct: 629 QELRVRQESQAYQEMLRYRNGLPIAKYRQEIINTLEQSQILVLSGETGCG 678
>gi|310792592|gb|EFQ28119.1| helicase associated domain-containing protein [Glomerella
graminicola M1.001]
Length = 1342
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/115 (50%), Positives = 76/115 (66%), Gaps = 5/115 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL+FLPG + ++R+ NS ++PLH+ L T QK +F+ PP G RKIV+A
Sbjct: 838 ILIFLPG---VAEINRACGALRSINS--LHVLPLHASLETKEQKRVFSNPPSGKRKIVVA 892
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TN+AETSITIDDIV V+D GK K + +D +N+ L+ W S A KQRRGRAGR
Sbjct: 893 TNVAETSITIDDIVAVIDSGKVKETTYDPVNNMRKLEENWASQAACKQRRGRAGR 947
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 40/55 (72%)
Query: 30 DAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
D+ + E +R+ + ++ M+ R++LP++Q+R+ +++ V +N +T+ISGETGSG
Sbjct: 551 DSRTRDEWLRRTEEPAWERMMSKRQQLPAWQVREKIINTVEHNHVTIISGETGSG 605
>gi|524922670|ref|XP_005065589.1| PREDICTED: ATP-dependent RNA helicase Dhx29 [Mesocricetus auratus]
Length = 1368
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/114 (48%), Positives = 76/114 (66%)
Query: 190 LVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLAT 249
L+FLPG I L+ + F S R+++I LHS+L T Q + F PP GVRKIVLAT
Sbjct: 870 LIFLPGLAHIQQLYDLLSNDRRFYSERYEVIALHSVLSTQDQAAAFRLPPPGVRKIVLAT 929
Query: 250 NIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
NIAET ITI D+V+V+D G+TK + + +++L ++S A+A QR+GRAGR
Sbjct: 930 NIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGR 983
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 40/51 (78%), Gaps = 1/51 (1%)
Query: 35 KEMIRKLQSR-RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+ + RKLQS +YQ +L+ R++LP ++ RD++++ ++ +++ V++GETGSG
Sbjct: 549 RSLFRKLQSTPKYQRLLKERQQLPVFKHRDSIVETLKRHRVVVVAGETGSG 599
>gi|449266453|gb|EMC77506.1| ATP-dependent RNA helicase A, partial [Columba livia]
Length = 855
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/115 (44%), Positives = 77/115 (66%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPGW+ I +L + + + F +++I+PLHS +P Q+ +F+ P GV K++L+
Sbjct: 647 VLVFLPGWNLIYTLQKHLEMNPRFGGRQYRILPLHSQIPLEEQRRVFDPVPPGVTKVILS 706
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
T+IAETSITI+D+VYV+D K K+ F +N+ W S N +QR+GRAGR
Sbjct: 707 TSIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGR 761
>gi|354482597|ref|XP_003503484.1| PREDICTED: ATP-dependent RNA helicase Dhx29 [Cricetulus griseus]
Length = 1368
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/114 (48%), Positives = 76/114 (66%)
Query: 190 LVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLAT 249
L+FLPG I L+ + F S R+++I LHS+L T Q + F PP GVRKIVLAT
Sbjct: 870 LIFLPGLAHIQQLYDLLSNDRRFYSERYEVIALHSVLSTQDQAAAFRLPPPGVRKIVLAT 929
Query: 250 NIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
NIAET ITI D+V+V+D G+TK + + +++L ++S A+A QR+GRAGR
Sbjct: 930 NIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGR 983
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
Query: 35 KEMIRKLQSR-RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
K + RKLQS +YQ +L+ R++LP ++ RD +++ ++ +++ V++GETGSG
Sbjct: 549 KNLFRKLQSTPKYQRLLKERQQLPVFKHRDLIVETLKRHRVVVVAGETGSG 599
>gi|344240842|gb|EGV96945.1| ATP-dependent RNA helicase Dhx29 [Cricetulus griseus]
Length = 1371
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/114 (48%), Positives = 76/114 (66%)
Query: 190 LVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLAT 249
L+FLPG I L+ + F S R+++I LHS+L T Q + F PP GVRKIVLAT
Sbjct: 870 LIFLPGLAHIQQLYDLLSNDRRFYSERYEVIALHSVLSTQDQAAAFRLPPPGVRKIVLAT 929
Query: 250 NIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
NIAET ITI D+V+V+D G+TK + + +++L ++S A+A QR+GRAGR
Sbjct: 930 NIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGR 983
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
Query: 35 KEMIRKLQSR-RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
K + RKLQS +YQ +L+ R++LP ++ RD +++ ++ +++ V++GETGSG
Sbjct: 549 KNLFRKLQSTPKYQRLLKERQQLPVFKHRDLIVETLKRHRVVVVAGETGSG 599
>gi|511840412|ref|XP_004744708.1| PREDICTED: ATP-dependent RNA helicase DHX29 [Mustela putorius furo]
gi|511942157|ref|XP_004789850.1| PREDICTED: ATP-dependent RNA helicase DHX29 [Mustela putorius furo]
Length = 1367
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 77/115 (66%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+L+FLPG I L+ + F S R+++I LHS+L T Q + F PP GVRKIVLA
Sbjct: 867 VLIFLPGLAHIQQLYDLLSTDRRFFSERYKVIALHSILSTQDQAAAFTLPPPGVRKIVLA 926
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAET ITI D+V+V+D G+TK + + +++L ++S A+A QR+GRAGR
Sbjct: 927 TNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGR 981
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 40/51 (78%), Gaps = 1/51 (1%)
Query: 35 KEMIRKLQSR-RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+ + RKLQ+ +YQ +L+ R++LP ++ RD++++ ++ +++ V++GETGSG
Sbjct: 547 RNLFRKLQNTPKYQRLLKERQQLPVFKHRDSIVETLKRHRVVVVAGETGSG 597
>gi|389751581|gb|EIM92654.1| P-loop containing nucleoside triphosphate hydrolase protein [Stereum
hirsutum FP-91666 SS1]
Length = 1473
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 76/115 (66%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+L+F+PG I L+ + FN+ F I PLHS + + +Q ++F+ PPEGVRKIV+A
Sbjct: 944 VLIFMPGIAEIRRLNDLLMDHPAFNNQDFIIYPLHSTISSENQGAVFDIPPEGVRKIVIA 1003
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAET ITI DI V+D GK + FD K ++ L +++ +NA QRRGRAGR
Sbjct: 1004 TNIAETGITIPDITCVIDSGKHREMRFDEKRQLSRLVETYVAKSNAAQRRGRAGR 1058
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 46 YQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
YQ+ML R +LP RD ++ + +QI V+SGETG G
Sbjct: 634 YQDMLVQRNRLPIAHYRDEIISTLDTSQIMVLSGETGCG 672
>gi|388858630|emb|CCF47897.1| probable DNA/RNA helicase (DEAD/H box family II) [Ustilago hordei]
Length = 1686
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/114 (49%), Positives = 72/114 (63%)
Query: 190 LVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLAT 249
L+F+PG I H + F FQ+ PLHS + + +Q ++FN PP GVRKIV+AT
Sbjct: 1156 LIFMPGLAEIRKCHDMLVDHPTFGGPGFQLFPLHSTISSENQGAVFNVPPPGVRKIVIAT 1215
Query: 250 NIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
NIAET ITI DI V+D GK +D K I+ L +I+ +NAKQRRGRAGR
Sbjct: 1216 NIAETGITIPDITCVIDSGKHTEMRYDEKRQISRLVECFIARSNAKQRRGRAGR 1269
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 30/45 (66%)
Query: 40 KLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
++ S YQ+ML R+ LP R +LD+V NNQI V+SGETG G
Sbjct: 826 RIASPSYQKMLPGRQSLPIANHRQKILDLVENNQIFVLSGETGCG 870
>gi|212532665|ref|XP_002146489.1| ATP dependent RNA helicase, putative [Talaromyces marneffei ATCC
18224]
gi|210071853|gb|EEA25942.1| ATP dependent RNA helicase, putative [Talaromyces marneffei ATCC
18224]
Length = 1461
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/118 (52%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPG I LH + FN + I LHS + + Q+ F PPEG RKIV+A
Sbjct: 946 ILVFLPGLAEIRRLHDEISSDPTFNQG-WIIHTLHSSIASEDQEKAFLVPPEGTRKIVIA 1004
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLK 306
TNIAET ITI DI V+D GK K+ FD K ++ L +IS ANAKQRRGRAGR K
Sbjct: 1005 TNIAETGITIPDITAVIDAGKEKVMRFDEKRQLSRLVESFISRANAKQRRGRAGRVQK 1062
Score = 39.3 bits (90), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 25/39 (64%)
Query: 46 YQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+Q M E+RK LP + + +LD + ++Q +I ETGSG
Sbjct: 654 FQHMAESRKNLPVWAYKQEILDTLADHQAVIICSETGSG 692
>gi|471906847|emb|CCO28705.1| putative helicase C15C4.05 [Rhizoctonia solani AG-1 IB]
Length = 566
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/115 (49%), Positives = 73/115 (63%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPG + I L + F + F+I PLHS LP+ SQ ++F PP G+RKIV++
Sbjct: 98 VLVFLPGLNEIRQLTDVLGAHRDFGTRAFRIYPLHSSLPSESQTAVFEVPPPGIRKIVVS 157
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAET +TI DI V+D GK K FD K + L I+ +NA QRRGRAGR
Sbjct: 158 TNIAETGVTIPDITCVIDSGKHKEMRFDEKRQTSKLVETTIARSNAAQRRGRAGR 212
>gi|507562615|ref|XP_004664996.1| PREDICTED: ATP-dependent RNA helicase DHX29 [Jaculus jaculus]
Length = 1369
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 76/115 (66%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+L+FLPG I L+ + F S R+++I LHS+L T Q F PP GVRKIVLA
Sbjct: 870 VLIFLPGLAHIQQLYDLLSNDRRFYSERYKVIALHSILSTQDQAVAFTLPPPGVRKIVLA 929
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAET ITI D+V+V+D G+TK + + +++L ++S A+A QR+GRAGR
Sbjct: 930 TNIAETGITIPDVVFVIDSGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGR 984
Score = 45.4 bits (106), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
Query: 35 KEMIRKLQSR-RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+ + RKLQS +Y +L+ R++LP ++ R+++++ ++ +++ V++GETGSG
Sbjct: 550 RTLFRKLQSTPKYLRLLKERQQLPVFKHRESIVETLKRHRVVVVAGETGSG 600
>gi|270003897|gb|EFA00345.1| hypothetical protein TcasGA2_TC003184 [Tribolium castaneum]
Length = 1222
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/115 (44%), Positives = 76/115 (66%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPGW+ I ++ R + Q F + ++++PLHS +P Q+ +F P V K++LA
Sbjct: 645 VLVFLPGWNLIFAMMRHLQQHPVFGGAAYRVLPLHSQIPREDQRRVFEPVPPHVTKVILA 704
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+D+V+V+D K K+ F +N+ + W S N +QR+GRAGR
Sbjct: 705 TNIAETSITINDVVFVIDSCKAKIKLFTSHNNMTSYATVWASRTNLEQRKGRAGR 759
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%)
Query: 329 VNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNSCLLYEFAMVDNKP 388
V+ +++ +LL++I + + PGA+LVFLPGW+ I ++ R + Q F + P
Sbjct: 624 VSFELMEALLKYIKSQEIPGAVLVFLPGWNLIFAMMRHLQQHPVFGGAAYRVLPLHSQIP 683
Query: 389 KE 390
+E
Sbjct: 684 RE 685
>gi|350402053|ref|XP_003486351.1| PREDICTED: dosage compensation regulator-like [Bombus impatiens]
Length = 1234
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/115 (48%), Positives = 72/115 (62%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL+FLPGW+ I +L + + Q + S + IIPLHS LP Q +F V KI+LA
Sbjct: 649 ILIFLPGWNLIFALMKHLQQHPVYGGSSYMIIPLHSQLPREDQHKVFEPVMPEVTKIILA 708
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+D+VYV+D K KM F +N+ W S N +QR+GRAGR
Sbjct: 709 TNIAETSITINDVVYVIDSCKAKMKLFTSHNNMTNYATVWASKTNLEQRKGRAGR 763
>gi|344272290|ref|XP_003407967.1| PREDICTED: ATP-dependent RNA helicase DHX29 [Loxodonta africana]
Length = 1339
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 76/115 (66%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+L+FLPG I L+ + F R+++I LHS+L T Q + F PP GVRKIVLA
Sbjct: 839 VLIFLPGLAHIQQLYDLLSTDRRFYPERYKVIALHSILSTQDQAAAFTFPPPGVRKIVLA 898
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAET ITI D+V+V+D G+TK + F +++L ++S A+A QR+GRAGR
Sbjct: 899 TNIAETGITIPDVVFVIDTGRTKENKFHESSQMSSLVETFVSKASALQRQGRAGR 953
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
Query: 35 KEMIRKLQ-SRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+ + RKLQ + +YQ +L+ R++LP ++ R+ +++ ++ +++ V++GETGSG
Sbjct: 548 RNLFRKLQGTSKYQRLLKERQQLPVFKHRNLIVETLKRHRVVVVAGETGSG 598
>gi|301095780|ref|XP_002896989.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
gi|262108418|gb|EEY66470.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
Length = 1156
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/119 (48%), Positives = 79/119 (66%), Gaps = 5/119 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGW+ I+ + R++ S SS ++I LHS L Q+ F TPP G RK+VLA
Sbjct: 576 ILVFLPGWEEISFMERALLNSPA-TSSTYEIALLHSRLSAQEQRRAFMTPPHGKRKLVLA 634
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDN----IATLKPEWISLANAKQRRGRAGR 303
TNIAETS+TI+D+V+VVDCGK+K ++ + + L+ W++ AN QR GRAGR
Sbjct: 635 TNIAETSLTIEDVVFVVDCGKSKQAHALAATSSSSFVMGLQTTWVARANCVQRTGRAGR 693
>gi|507934288|ref|XP_004678377.1| PREDICTED: ATP-dependent RNA helicase DHX29 [Condylura cristata]
Length = 1368
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 77/115 (66%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+L+FLPG I L+ + F S R+++I LHS+L T Q + F PP GVRKIVLA
Sbjct: 869 VLIFLPGLAHIQQLYDLLSTDRRFFSERYKVIALHSILSTQDQAAAFTFPPPGVRKIVLA 928
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAET ITI D+V+V+D G+TK + + +++L ++S A+A QR+GRAGR
Sbjct: 929 TNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGR 983
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 40/51 (78%), Gaps = 1/51 (1%)
Query: 35 KEMIRKLQSR-RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+ + RKLQS +YQ +L+ R++LP ++ RD++++ ++ +++ V++GETGSG
Sbjct: 549 RNLFRKLQSTPKYQRLLKERQQLPVFKHRDSIVETLKRHRVVVVAGETGSG 599
>gi|91078338|ref|XP_973454.1| PREDICTED: similar to maleless protein [Tribolium castaneum]
Length = 1220
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/115 (44%), Positives = 76/115 (66%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPGW+ I ++ R + Q F + ++++PLHS +P Q+ +F P V K++LA
Sbjct: 645 VLVFLPGWNLIFAMMRHLQQHPVFGGAAYRVLPLHSQIPREDQRRVFEPVPPHVTKVILA 704
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+D+V+V+D K K+ F +N+ + W S N +QR+GRAGR
Sbjct: 705 TNIAETSITINDVVFVIDSCKAKIKLFTSHNNMTSYATVWASRTNLEQRKGRAGR 759
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%)
Query: 329 VNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNSCLLYEFAMVDNKP 388
V+ +++ +LL++I + + PGA+LVFLPGW+ I ++ R + Q F + P
Sbjct: 624 VSFELMEALLKYIKSQEIPGAVLVFLPGWNLIFAMMRHLQQHPVFGGAAYRVLPLHSQIP 683
Query: 389 KE 390
+E
Sbjct: 684 RE 685
>gi|501752287|emb|CCG83713.1| protein of unknown function [Taphrina deformans PYCC 5710]
Length = 1393
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/120 (50%), Positives = 74/120 (61%), Gaps = 1/120 (0%)
Query: 185 LVVPILVFLPGWDTINSLHRSMCQSSFFNSSRFQII-PLHSMLPTVSQKSIFNTPPEGVR 243
L IL+FLPG I L ++ F R II PLHS +P Q++ F+ PP GVR
Sbjct: 877 LTQAILIFLPGIGEIRRLMDTLHAHKTFGDERMWIIYPLHSSIPNDQQQAAFDVPPRGVR 936
Query: 244 KIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
KIVLATNIAET ITI DI V+D GK K S FD + + L +I+ +NAKQR GRAGR
Sbjct: 937 KIVLATNIAETGITIPDITCVIDTGKHKESRFDARRQLNKLVETFIAKSNAKQRMGRAGR 996
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%)
Query: 43 SRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHLDFITLKRSETQ 100
S Y ML R+ LP R+A+L + NNQ+T++ GETG G L L+ + +Q
Sbjct: 586 SDSYASMLNYRRTLPIASYREALLSSIYNNQVTIVCGETGCGKSTQLPTFILEDAMSQ 643
>gi|195401473|ref|XP_002059337.1| GJ18398 [Drosophila virilis]
gi|194142343|gb|EDW58749.1| GJ18398 [Drosophila virilis]
Length = 1362
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/116 (47%), Positives = 79/116 (68%), Gaps = 1/116 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSS-FFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFLPGW+ I +L + + S+ F + +++I+P HS +P Q+ +F P+G+ KI+L
Sbjct: 659 ILVFLPGWNLIFALMKFLQSSNNFGDPQQYRILPCHSQIPRDDQRRVFEPVPDGITKIIL 718
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+TNIAETSITIDDIV+VVD K +M F +N+ + W S N +QR+GRAGR
Sbjct: 719 STNIAETSITIDDIVFVVDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGR 774
Score = 38.1 bits (87), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 11/69 (15%)
Query: 36 EMIRKLQSRR-----YQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHL- 89
E R+L RR Y++ LE R KLP MR ++ + N + +I G TG G +
Sbjct: 361 EYERQLCERRQNNPEYRQFLEFRDKLPIAAMRSEIMTAINENPVVIIRGNTGCGKTTQIA 420
Query: 90 -----DFIT 93
D+IT
Sbjct: 421 QYILDDYIT 429
>gi|15559770|gb|AAH14237.1| DHX30 protein [Homo sapiens]
Length = 501
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 53/92 (57%), Positives = 69/92 (75%)
Query: 212 FNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLATNIAETSITIDDIVYVVDCGKTK 271
+ S++ I+P+HS +P + QK+IF PP GVRKIVLATNIAETSITI+DIV+VVD G K
Sbjct: 1 MHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLATNIAETSITINDIVHVVDSGLHK 60
Query: 272 MSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 61 EERYDLKTKVSCLETVWVSRANVIQRRGRAGR 92
>gi|410903590|ref|XP_003965276.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase
Dhx29-like [Takifugu rubripes]
Length = 1325
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/116 (47%), Positives = 78/116 (67%), Gaps = 1/116 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
+LVFLPG I L+ +C F + +RF+I+ LHS L + Q + F PP GVRKIVL
Sbjct: 827 VLVFLPGLAHIQQLYDLLCSDKRFRDKNRFRIVALHSTLSSKDQAAAFTVPPAGVRKIVL 886
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+TNIAET +TI D+V+V+D GKTK + + +++L ++S A+A QR+GRAGR
Sbjct: 887 STNIAETGVTIPDVVFVIDTGKTKENKYHESSQMSSLVETFVSKASALQRQGRAGR 942
Score = 39.3 bits (90), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 35 KEMIRKLQSRRYQEMLEA-RKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+++ +KL+ + L+A R++LP +Q R +L+ ++ + + V++GETGSG
Sbjct: 507 RQLFKKLKKSPLAQKLQAEREQLPVFQNRHRILEALQRHSVVVVAGETGSG 557
>gi|357618484|gb|EHJ71445.1| MLE protein [Danaus plexippus]
Length = 804
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 53/116 (45%), Positives = 79/116 (68%), Gaps = 1/116 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
+L+FLPGW+ I +L + + ++S F + + I+PLHS +P Q+ +F PP GV K+++
Sbjct: 187 VLIFLPGWNLIFALMKHLMKNSVFGDPQKCLILPLHSQIPREEQRKVFVAPPPGVMKVIV 246
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+TNIAETSITI+D+VYV+D K KM F +N+ + W S +N +QR GRAGR
Sbjct: 247 STNIAETSITINDVVYVIDSCKAKMKLFTSHNNMTSYATVWASRSNIEQRSGRAGR 302
Score = 40.0 bits (92), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 305 LKRSETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLH 364
L +E ++ D ++ L + +L + ++I ++L +I + GA+L+FLPGW+ I +L
Sbjct: 145 LSPAEYSRHTIDAMSKLSEKDL---SFELIEAILTYISSQDVEGAVLIFLPGWNLIFALM 201
Query: 365 RSMCQSSFFNS---CLL 378
+ + ++S F CL+
Sbjct: 202 KHLMKNSVFGDPQKCLI 218
>gi|50547773|ref|XP_501356.1| YALI0C02365p [Yarrowia lipolytica]
gi|49647223|emb|CAG81655.1| YALI0C02365p [Yarrowia lipolytica CLIB122]
Length = 1330
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/115 (51%), Positives = 74/115 (64%), Gaps = 5/115 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+L+FLPG I S C + +IPLHS L Q+ +F+TPP G RK+V+A
Sbjct: 840 VLIFLPGVAEI-----SQCCAVLSQLGTCHVIPLHSGLSPQQQRLVFSTPPRGKRKVVVA 894
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI DIV VVD G+ K + +D ++NI L W+S A AKQRRGRAGR
Sbjct: 895 TNIAETSITIPDIVAVVDSGRVKETVYDAENNIVRLVSTWVSQAAAKQRRGRAGR 949
>gi|340714916|ref|XP_003395968.1| PREDICTED: dosage compensation regulator-like [Bombus terrestris]
Length = 1236
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 72/115 (62%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL+FLPGW+ I +L + + Q + S + IIPLHS LP Q +F + KI+LA
Sbjct: 650 ILIFLPGWNLIFALMKHLQQHPIYGGSSYMIIPLHSQLPREDQHKVFEPVMPEITKIILA 709
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+D+VYV+D K KM F +N+ W S N +QR+GRAGR
Sbjct: 710 TNIAETSITINDVVYVIDSCKAKMKLFTSHNNMTNYATVWASKTNLEQRKGRAGR 764
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 35/64 (54%)
Query: 312 QYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSS 371
QY N++ + ++ ++I +LL+HI GAIL+FLPGW+ I +L + + Q
Sbjct: 612 QYSIQTKNVMAQLNEKEISFELIEALLKHIKKQNISGAILIFLPGWNLIFALMKHLQQHP 671
Query: 372 FFNS 375
+
Sbjct: 672 IYGG 675
>gi|367036887|ref|XP_003648824.1| hypothetical protein THITE_2106703 [Thielavia terrestris NRRL 8126]
gi|346996085|gb|AEO62488.1| hypothetical protein THITE_2106703 [Thielavia terrestris NRRL 8126]
Length = 1445
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/165 (40%), Positives = 92/165 (55%), Gaps = 15/165 (9%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL+FLPG IN C ++ + ++PLH+ L T QK +F PP G RK+V+A
Sbjct: 899 ILIFLPGVAEINR----AC-NALRATPSLHVLPLHASLETREQKKVFAAPPPGKRKVVVA 953
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TN+AETSITIDDIV VVD G+ K ++FD +N+ L+ W S A KQRRGRAGR
Sbjct: 954 TNVAETSITIDDIVAVVDSGRVKETSFDPTNNMRKLEETWASRAACKQRRGRAGRVQAGK 1013
Query: 309 ETQQYPNDVLNMLK---DPELEGVNNDVIFSLLQHICTTQRPGAI 350
+ Y ++ + + DPE+ V L+ +C R I
Sbjct: 1014 CYKLYTRNLESQMAERPDPEIRRVP-------LEQLCLAVRAMGI 1051
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 38/50 (76%)
Query: 35 KEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+E + ++++ Y++ML R++LP++Q+R V+ V NQ+T+ISGETGSG
Sbjct: 606 QEWMARIETPAYKKMLSQRERLPAWQVRAEVVRTVTENQVTIISGETGSG 655
>gi|297277456|ref|XP_002801360.1| PREDICTED: probable ATP-dependent RNA helicase DHX34-like [Macaca
mulatta]
Length = 1014
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 137/272 (50%), Gaps = 43/272 (15%)
Query: 45 RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHLDFITLKRSETQQYPN 104
R ++ R LP Q + +L ++ +Q+ V++G+TG G K ++ QY
Sbjct: 151 RLAKLQRERAALPIAQYGNRILQTLKEHQVVVVAGDTGCG----------KSTQVPQY-- 198
Query: 105 DVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVYCTYTFMGVSPMKVFFCKNVLQ- 163
++ + H+ TQ P I +G + + + V Q
Sbjct: 199 -----------------LLTAGFSHVACTQ-PRRIACISLAKRVGFESLSQYGSQVVYQP 240
Query: 164 RLMKGVGANS----PKRWVKLLRSM--LVVP-----ILVFLPGWDTINSLHRSMCQSSFF 212
+ + + S P+ ++++L S+ P +LVFL G I+++ ++ Q+
Sbjct: 241 QEAEPTTSKSEKLDPRPFLRVLESIDHKYPPEERGDLLVFLSGMAEISTVLEAV-QTYAS 299
Query: 213 NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLATNIAETSITIDDIVYVVDCGKTKM 272
++ R+ ++PLHS L Q +F+ P GVRK +L+TNIAETS+TID I +VVD GK K
Sbjct: 300 HTQRWVVLPLHSALSVADQDKVFDVAPPGVRKCILSTNIAETSVTIDGIRFVVDSGKVKE 359
Query: 273 SNFDVKDNIATLKPEWISLANAKQRRGRAGRT 304
++D + + L+ WIS A+A+QR+GRAGRT
Sbjct: 360 MSYDPQAKLQRLQEFWISQASAEQRKGRAGRT 391
>gi|302807261|ref|XP_002985343.1| hypothetical protein SELMODRAFT_446247 [Selaginella moellendorffii]
gi|300146806|gb|EFJ13473.1| hypothetical protein SELMODRAFT_446247 [Selaginella moellendorffii]
Length = 1142
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/166 (40%), Positives = 92/166 (55%), Gaps = 15/166 (9%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVF+ GW+ I++L + Q SR +K IF PP GVRKIVLA
Sbjct: 562 VLVFMTGWEDISALLDKLKQDPVLGDSR--------------KKLIFEHPPPGVRKIVLA 607
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TN+AETSITI+D+V+VVD GK K +++D +N L P WIS A+++QRRGRAGR
Sbjct: 608 TNMAETSITINDVVFVVDVGKAKETSYDALNNTPCLLPTWISKASSRQRRGRAGRVKPGE 667
Query: 309 ETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFL 354
YP V + +L + + SL I + Q G + +FL
Sbjct: 668 CYHLYPKAVHEAFAEYQLPELLRTPLHSLCLQIKSLQL-GDVAMFL 712
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 31/48 (64%)
Query: 42 QSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHL 89
+S Q+M+ R+ LPS++ + +L+++ NQ+ VISGETG G L
Sbjct: 266 ESEEGQKMMTIRRNLPSFKEKAGLLEVIAKNQVVVISGETGCGKTTQL 313
>gi|398015383|ref|XP_003860881.1| ATP-dependent DEAD/H RNA helicase, putative [Leishmania donovani]
gi|322499104|emb|CBZ34176.1| ATP-dependent DEAD/H RNA helicase, putative [Leishmania donovani]
Length = 1087
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 58/115 (50%), Positives = 74/115 (64%), Gaps = 2/115 (1%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGW I+ + + +S F + I+ LHS L T Q+ +F PP+ RKIVLA
Sbjct: 416 ILVFLPGWAAISCIANRLKRSQF--ARELSILMLHSSLTTAEQQRVFERPPKNYRKIVLA 473
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
T+IAE SITI+DIVYV+D G K +++D N + LK I AN QRRGRAGR
Sbjct: 474 TSIAEISITINDIVYVIDSGLVKGTSYDPMGNTSALKATLIGKANGVQRRGRAGR 528
>gi|400602350|gb|EJP69952.1| helicase associated domain-containing protein [Beauveria bassiana
ARSEF 2860]
Length = 1373
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/140 (44%), Positives = 85/140 (60%), Gaps = 6/140 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL+FLPG I R++ + ++PLH+ L T QK +F + P G RK+V+A
Sbjct: 856 ILIFLPGVGEIGQACRALQAIT-----SLHVLPLHASLETREQKRVFASAPHGKRKVVVA 910
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TN+AETSITIDDIV V+D GK K ++FD +N+ L+ W S A KQRRGRAGR +
Sbjct: 911 TNVAETSITIDDIVAVIDSGKVKETSFDPGNNMRKLEETWASRAACKQRRGRAGRVQEGK 970
Query: 309 ETQQYPNDVLN-MLKDPELE 327
+ Y ++ N M + PE E
Sbjct: 971 CYKLYTQNLENQMAERPEPE 990
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 40/55 (72%)
Query: 30 DAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
DA K+ ++ +S Y+EML R+KLP++QMR+ ++ V +N +T+ISGETGSG
Sbjct: 569 DARSKEAWFKRQESSAYKEMLGKRQKLPAWQMRERIVKTVMDNHVTIISGETGSG 623
>gi|156059440|ref|XP_001595643.1| hypothetical protein SS1G_03732 [Sclerotinia sclerotiorum 1980]
gi|154701519|gb|EDO01258.1| hypothetical protein SS1G_03732 [Sclerotinia sclerotiorum 1980 UF-70]
Length = 1442
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/120 (50%), Positives = 77/120 (64%), Gaps = 1/120 (0%)
Query: 184 MLVVPILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVR 243
M ILVFLPG I +L+ +C F SS + I PLHS + + Q++ F PP G+R
Sbjct: 929 MYSKAILVFLPGIAEIRTLNDMLCGHPAF-SSDWYIYPLHSTIASEDQEAAFLVPPPGIR 987
Query: 244 KIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
KIVLATNIAET ITI D+ V+D GK + FD + ++ L +IS ANAKQRRGRAGR
Sbjct: 988 KIVLATNIAETGITIPDVTCVIDTGKHREMRFDERRQLSRLLETFISKANAKQRRGRAGR 1047
Score = 45.1 bits (105), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 5/64 (7%)
Query: 26 DPVLDAAFKKEMIRKL-----QSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGE 80
D L A F E +++ S+ YQ ML++R +LP + +D VL + +Q+ ++ GE
Sbjct: 618 DKGLKAGFAPETYQRIWAEKCSSQSYQHMLQSRMQLPMWSFKDEVLGAIDRSQVVIVCGE 677
Query: 81 TGSG 84
TG G
Sbjct: 678 TGCG 681
>gi|353235847|emb|CCA67853.1| probable DNA/RNA helicase (DEAD/H box family II) [Piriformospora
indica DSM 11827]
Length = 1449
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 52/115 (45%), Positives = 74/115 (64%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVF+PG I LH + F++ F+I PLHS + + Q ++F PP G+RKIV++
Sbjct: 924 ILVFMPGLAEIRKLHDMLLSHELFSNEAFRIYPLHSTVSSEGQSAVFEVPPAGIRKIVIS 983
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+NI+ET +TI DI V+D GK + FD K ++ L +I+ +NA QRRGRAGR
Sbjct: 984 SNISETGVTIPDITAVIDSGKHRQMMFDEKRQLSRLVETFIAKSNAAQRRGRAGR 1038
>gi|154310252|ref|XP_001554458.1| hypothetical protein BC1G_07046 [Botryotinia fuckeliana B05.10]
Length = 1277
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 76/115 (66%), Gaps = 1/115 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPG I +L+ +C F SS + I PLHS + + Q++ F PP G+RKIVLA
Sbjct: 966 ILVFLPGIAEIRTLNDMLCGHPAF-SSDWYIYPLHSTIASEDQEAAFLVPPPGIRKIVLA 1024
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAET ITI D+ V+D GK + FD + ++ L +IS ANAKQRRGRAGR
Sbjct: 1025 TNIAETGITIPDVTCVIDTGKHREMRFDERRQLSRLLETFISKANAKQRRGRAGR 1079
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 33/53 (62%)
Query: 32 AFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
A+++ K S YQ ML++R +LP + +D VL + ++Q+ ++ GETG G
Sbjct: 661 AYQRIWAEKSSSHSYQHMLQSRMQLPMWSFKDEVLGAIDHSQVVIVCGETGCG 713
>gi|505801862|ref|XP_004608487.1| PREDICTED: ATP-dependent RNA helicase DHX29 [Sorex araneus]
Length = 1367
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 77/115 (66%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+L+FLPG I L+ + +S R+++I LHS+L T Q + F PP GVRKIVLA
Sbjct: 868 VLIFLPGLAHIQQLYDLLSADRRLSSERYKVIALHSILSTQDQAAAFTLPPPGVRKIVLA 927
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAET ITI D+V+V+D G+TK + + +++L ++S A+A QR+GRAGR
Sbjct: 928 TNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGR 982
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 40/51 (78%), Gaps = 1/51 (1%)
Query: 35 KEMIRKLQSR-RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+ + RKLQS +YQ +L+ R++LP ++ R+++++ ++ +++ V++GETGSG
Sbjct: 547 RNLFRKLQSTPKYQRLLKERQELPVFKHRNSIVETLKRHRVVVVAGETGSG 597
>gi|47219913|emb|CAF97183.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1337
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/116 (47%), Positives = 78/116 (67%), Gaps = 1/116 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
+LVFLPG I L+ +C F + +RF+I+ LHS L + Q + F PP GVRKIVL
Sbjct: 831 VLVFLPGLAHIQQLYDLLCSDKRFRDKNRFRIVALHSTLSSKDQAAAFTVPPAGVRKIVL 890
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+TNIAET +TI D+V+V+D GKTK + + +++L ++S A+A QR+GRAGR
Sbjct: 891 STNIAETGVTIPDVVFVIDTGKTKENKYHESSQMSSLVETFVSKASALQRQGRAGR 946
Score = 39.7 bits (91), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 35 KEMIRKLQSRRYQEMLEA-RKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+E++++L+ + L+A R++LP +Q R +L+ ++ + + V++GETGSG
Sbjct: 427 RELLKRLKKSPLAQKLQAEREQLPVFQHRRRILEALQRHPVVVVAGETGSG 477
>gi|12321257|gb|AAG50701.1|AC079604_8 hypothetical protein [Arabidopsis thaliana]
Length = 1453
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/150 (42%), Positives = 89/150 (59%), Gaps = 11/150 (7%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQ-IIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
IL+FLPG I L + S F ++PLHS + + Q+ +F PP+G+RK++
Sbjct: 918 ILIFLPGVAEIYMLLDMLAASYRFRGPAADWLLPLHSSIASSEQRKVFLRPPKGLRKVIA 977
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR---- 303
ATNIAETSITIDD+VYV+D GK K + ++ + ++++ +WIS ANA+QR GRAGR
Sbjct: 978 ATNIAETSITIDDVVYVIDSGKHKENRYNPQKKLSSMVEDWISQANARQRTGRAGRVKPG 1037
Query: 304 ------TLKRSETQQYPNDVLNMLKDPELE 327
T R E P V ML+ P +E
Sbjct: 1038 ICFSLYTRYRFEKLMRPYQVPEMLRMPLVE 1067
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 35/53 (66%)
Query: 32 AFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+ +++ K ++++Y++ML+ R LP ++++ +L ++ + V+ GETGSG
Sbjct: 590 SLQRKQENKKRTQKYKDMLKTRTALPISEVKNGILQHLKEKDVLVVCGETGSG 642
>gi|30696202|ref|NP_176103.2| RNA helicase family protein [Arabidopsis thaliana]
gi|332195372|gb|AEE33493.1| RNA helicase family protein [Arabidopsis thaliana]
Length = 1459
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/150 (42%), Positives = 89/150 (59%), Gaps = 11/150 (7%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQ-IIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
IL+FLPG I L + S F ++PLHS + + Q+ +F PP+G+RK++
Sbjct: 918 ILIFLPGVAEIYMLLDMLAASYRFRGPAADWLLPLHSSIASSEQRKVFLRPPKGLRKVIA 977
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR---- 303
ATNIAETSITIDD+VYV+D GK K + ++ + ++++ +WIS ANA+QR GRAGR
Sbjct: 978 ATNIAETSITIDDVVYVIDSGKHKENRYNPQKKLSSMVEDWISQANARQRTGRAGRVKPG 1037
Query: 304 ------TLKRSETQQYPNDVLNMLKDPELE 327
T R E P V ML+ P +E
Sbjct: 1038 ICFSLYTRYRFEKLMRPYQVPEMLRMPLVE 1067
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 35/53 (66%)
Query: 32 AFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+ +++ K ++++Y++ML+ R LP ++++ +L ++ + V+ GETGSG
Sbjct: 590 SLQRKQENKKRTQKYKDMLKTRTALPISEVKNGILQHLKEKDVLVVCGETGSG 642
>gi|525004709|ref|XP_005050046.1| PREDICTED: ATP-dependent RNA helicase A [Ficedula albicollis]
Length = 1209
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 78/115 (67%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPGW+ I ++ + + + F S +++I+PLHS +P Q+ +F+ P GV K++L+
Sbjct: 618 VLVFLPGWNLIYTMQKHLEMNPRFGSHQYRILPLHSQIPLEEQRRVFDPVPPGVTKVILS 677
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
T+IAETSITI+D+V+V+D K K+ F +N+ W S N +QR+GRAGR
Sbjct: 678 TSIAETSITINDVVFVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGR 732
>gi|472244630|gb|EMR89239.1| putative helicase associated domain-containing protein [Botryotinia
fuckeliana BcDW1]
Length = 1474
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 76/115 (66%), Gaps = 1/115 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPG I +L+ +C F SS + I PLHS + + Q++ F PP G+RKIVLA
Sbjct: 966 ILVFLPGIAEIRTLNDMLCGHPAF-SSDWYIYPLHSTIASEDQEAAFLVPPPGIRKIVLA 1024
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAET ITI D+ V+D GK + FD + ++ L +IS ANAKQRRGRAGR
Sbjct: 1025 TNIAETGITIPDVTCVIDTGKHREMRFDERRQLSRLLETFISKANAKQRRGRAGR 1079
Score = 45.1 bits (105), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 33/53 (62%)
Query: 32 AFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
A+++ K S YQ ML++R +LP + +D VL + ++Q+ ++ GETG G
Sbjct: 661 AYQRIWAEKSSSHSYQHMLQSRMQLPMWSFKDEVLGAIDHSQVVIVCGETGCG 713
>gi|390335207|ref|XP_783104.3| PREDICTED: putative ATP-dependent RNA helicase DHX30-like
[Strongylocentrotus purpuratus]
Length = 932
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 53/115 (46%), Positives = 75/115 (65%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I S++ + ++ + ++ P+HS + +Q+++F+ PP GVRK+VLA
Sbjct: 538 ILCFLPGWQDIKSVYDKLLRAWDQSRDEHEVYPVHSHITVDNQQAMFDIPPVGVRKVVLA 597
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TN+AETSITI D+VYVV+ G K FD ++ L W S AN QR+GRAGR
Sbjct: 598 TNVAETSITIGDVVYVVNTGNHKEERFDSDLGVSCLDLHWASKANITQRKGRAGR 652
>gi|270001262|gb|EEZ97709.1| benign gonial cell neoplasm [Tribolium castaneum]
Length = 1181
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 55/116 (47%), Positives = 79/116 (68%), Gaps = 1/116 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPG+D I + + +++ +S +++ LH + Q +F P+ VRKI+L+
Sbjct: 519 ILVFLPGYDDIMICNDRLLETNIDKNS-YRVFFLHGSMNIKEQHEVFKPFPDNVRKIILS 577
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT 304
TNIAETS+TIDD+VYVVDCGK K+ +D +++L+ +WIS A KQR GRAGRT
Sbjct: 578 TNIAETSLTIDDVVYVVDCGKAKVQTYDSCSGLSSLQTQWISKACVKQRAGRAGRT 633
Score = 39.3 bits (90), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 53 RKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
RK+LP Y +R ++ VR N++ ++S ETGSG
Sbjct: 161 RKQLPIYDLRQVIVSKVRKNRVLIVSSETGSG 192
>gi|347836585|emb|CCD51157.1| similar to ATP dependent RNA helicase [Botryotinia fuckeliana T4]
Length = 1474
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 76/115 (66%), Gaps = 1/115 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPG I +L+ +C F SS + I PLHS + + Q++ F PP G+RKIVLA
Sbjct: 966 ILVFLPGIAEIRTLNDMLCGHPAF-SSDWYIYPLHSTIASEDQEAAFLVPPPGIRKIVLA 1024
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAET ITI D+ V+D GK + FD + ++ L +IS ANAKQRRGRAGR
Sbjct: 1025 TNIAETGITIPDVTCVIDTGKHREMRFDERRQLSRLLETFISKANAKQRRGRAGR 1079
Score = 45.4 bits (106), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 33/53 (62%)
Query: 32 AFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
A+++ K S YQ ML++R +LP + +D VL + ++Q+ ++ GETG G
Sbjct: 661 AYQRIWAEKCSSHSYQHMLQSRMQLPMWSFKDEVLGAIDHSQVVIVCGETGCG 713
>gi|308801194|ref|XP_003075376.1| mRNA splicing factor ATP-dependent RNA helicase (ISS) [Ostreococcus
tauri]
gi|116061932|emb|CAL52650.1| mRNA splicing factor ATP-dependent RNA helicase (ISS) [Ostreococcus
tauri]
Length = 1546
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 56/119 (47%), Positives = 74/119 (62%), Gaps = 3/119 (2%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNS---SRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
L+F+PG I L R + QS +I+PL+ L + Q+ IF PEGVRKI
Sbjct: 1030 FLIFMPGQFEILRLIRKLEQSRLLEERDVGTLRILPLYGSLSSKDQRRIFERSPEGVRKI 1089
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT 304
V+ATNIAETS+TIDD+ YV+D G+ K +D ++ L W+S A +KQRRGRAGRT
Sbjct: 1090 VVATNIAETSVTIDDVRYVIDTGRAKEMQYDSLRGLSVLADTWVSQAASKQRRGRAGRT 1148
>gi|472394243|ref|XP_004416377.1| PREDICTED: ATP-dependent RNA helicase DHX29 [Odobenus rosmarus
divergens]
Length = 1366
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 76/115 (66%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+L+FLPG I L+ + F S R+++I LHS+L T Q + F PP GVRKIVLA
Sbjct: 868 VLIFLPGLAHIQQLYDLLSTDRRFFSERYKVIALHSILSTQDQAAAFTLPPPGVRKIVLA 927
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAET ITI D+V+V+D G+TK + + +++L +S A+A QR+GRAGR
Sbjct: 928 TNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETSVSKASALQRQGRAGR 982
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 40/51 (78%), Gaps = 1/51 (1%)
Query: 35 KEMIRKLQSR-RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+ + RKLQS +YQ +L+ R++LP ++ R+++++ ++ +++ V++GETGSG
Sbjct: 548 RTLFRKLQSTPKYQRLLKERQQLPVFKHRNSIVETLKRHRVVVVAGETGSG 598
>gi|505756676|gb|EOR00826.1| putative ATP-dependent RNA helicase DHX36 [Wallemia ichthyophaga
EXF-994]
Length = 1346
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 50/120 (41%), Positives = 78/120 (65%), Gaps = 5/120 (4%)
Query: 189 ILVFLPGWDTINSLH-----RSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVR 243
+L+FLPGWD I ++ + +C +F +SS++ I LHS +P Q+ IF +G+R
Sbjct: 666 LLIFLPGWDEIKAVQTILEEQQLCGINFNDSSKYSIHVLHSSVPVQEQQKIFEPCEDGIR 725
Query: 244 KIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+I+L+TN+AETS+TI D+VYVVD + K +D + +++ L W+ +N QR GRAGR
Sbjct: 726 RIILSTNVAETSVTIPDVVYVVDAARVKEKRYDAERHMSQLVSAWVGKSNLNQRAGRAGR 785
>gi|449508002|ref|XP_002191685.2| PREDICTED: ATP-dependent RNA helicase A [Taeniopygia guttata]
Length = 1218
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 77/115 (66%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPGW+ I ++ + + S F +++I+PLHS +P Q+ +F+ P GV K++L+
Sbjct: 630 VLVFLPGWNLIYTMQKHLEMSPRFGGHQYRILPLHSQVPLEEQRRVFDPVPPGVTKVILS 689
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
T+IAETSITI+D+V+V+D K K+ F +N+ W S N +QR+GRAGR
Sbjct: 690 TSIAETSITINDVVFVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGR 744
>gi|358401307|gb|EHK50613.1| hypothetical protein TRIATDRAFT_53057 [Trichoderma atroviride IMI
206040]
Length = 1350
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 64/140 (45%), Positives = 86/140 (61%), Gaps = 6/140 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL+FLPG IN S+ NS ++PLH+ L T QK +F++ P G RK+V+A
Sbjct: 847 ILIFLPGVGEINQACNSL---RAINS--LHVLPLHASLETREQKRVFSSAPPGKRKVVVA 901
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TN+AETSITIDDIV V+D GK K ++FD ++N+ L+ W S A KQR+GRAGR
Sbjct: 902 TNVAETSITIDDIVAVIDSGKVKETSFDPQNNMRKLEETWASRAACKQRQGRAGRVQAGK 961
Query: 309 ETQQYPNDV-LNMLKDPELE 327
+ Y ++ NM PE E
Sbjct: 962 CYKLYTQNLEQNMAPRPEPE 981
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 40/57 (70%)
Query: 28 VLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+ DA ++E R+ ++ ++M+ R+ LP++QM+DA++ V N +T+ISGETGSG
Sbjct: 557 ITDAKSREEWFRRQENPSQKKMVTKRQALPAWQMQDAIIRTVNQNHVTIISGETGSG 613
>gi|189241637|ref|XP_001808443.1| PREDICTED: similar to ATP-dependent RNA helicase A [Tribolium
castaneum]
Length = 1393
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 79/116 (68%), Gaps = 1/116 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPG+D I + + +++ + + +++ LH + Q +F P+ VRKI+L+
Sbjct: 731 ILVFLPGYDDIMICNDRLLETNI-DKNSYRVFFLHGSMNIKEQHEVFKPFPDNVRKIILS 789
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT 304
TNIAETS+TIDD+VYVVDCGK K+ +D +++L+ +WIS A KQR GRAGRT
Sbjct: 790 TNIAETSLTIDDVVYVVDCGKAKVQTYDSCSGLSSLQTQWISKACVKQRAGRAGRT 845
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 53 RKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
RK+LP Y +R ++ VR N++ ++S ETGSG
Sbjct: 373 RKQLPIYDLRQVIVSKVRKNRVLIVSSETGSG 404
>gi|307104594|gb|EFN52847.1| hypothetical protein CHLNCDRAFT_138311 [Chlorella variabilis]
Length = 1640
Score = 112 bits (279), Expect = 6e-22, Method: Composition-based stats.
Identities = 70/196 (35%), Positives = 101/196 (51%), Gaps = 21/196 (10%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQ----IIPLHSMLPTVSQKSIFNTPPEGVRK 244
IL+F PG D I+ + R++ S ++ ++PLH LP Q +FN PP+G K
Sbjct: 1107 ILIFAPGADEISRICRTLSASGRVAAAAGGGGVLVLPLHGGLPPSQQSRVFNRPPKGTLK 1166
Query: 245 IVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT 304
IV+ATN+AETSITIDD+ V+D G+ K FD IA L+ ++S A A+QRRGRAGR
Sbjct: 1167 IVVATNVAETSITIDDVTAVLDTGRVKEMRFDAARGIARLQETFVSQAAAQQRRGRAGRV 1226
Query: 305 --------LKRSETQQYPNDVLNMLKDPELEGVNNDV---------IFSLLQHICTTQRP 347
R ++ P D ++ L+G+ DV + +LL + T P
Sbjct: 1227 RPGICYRLFSRRTWERMPRDTPPEIRRAPLQGLVLDVKGILGATADVPALLARMITPPEP 1286
Query: 348 GAILVFLPGWDTINSL 363
A+ L I +L
Sbjct: 1287 AALQRALTSLQLIGAL 1302
>gi|169600435|ref|XP_001793640.1| hypothetical protein SNOG_03051 [Phaeosphaeria nodorum SN15]
gi|160705439|gb|EAT89782.2| hypothetical protein SNOG_03051 [Phaeosphaeria nodorum SN15]
Length = 1278
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 58/115 (50%), Positives = 74/115 (64%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPG I ++ + FN+ + I PLHS + + Q++ F PP GVRKIVLA
Sbjct: 754 VLVFLPGIAEIRQVNDLLGGHPSFNNKDWLIYPLHSTISSEDQQAAFLIPPRGVRKIVLA 813
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAET +TI DI V+D GK K FD + ++ L +IS ANAKQRRGRAGR
Sbjct: 814 TNIAETGVTIPDITCVIDTGKHKEMRFDERRQLSRLTQSFISRANAKQRRGRAGR 868
>gi|399171394|emb|CCE27584.1| related to putative helicase [Claviceps purpurea 20.1]
Length = 1378
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 58/116 (50%), Positives = 75/116 (64%), Gaps = 7/116 (6%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNS-SRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
IL+FLPG IN C ++ S ++PLH+ L T QK +F++ P G RK+V+
Sbjct: 874 ILIFLPGVGEINH----AC--NYLRSIPSLHVLPLHASLETREQKRVFSSAPPGKRKVVV 927
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
ATN+AETSITIDDIV V+D GK K ++FD N+ L+ W S A KQRRGRAGR
Sbjct: 928 ATNVAETSITIDDIVVVIDSGKVKETSFDASSNMRRLEETWASRAACKQRRGRAGR 983
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 146/354 (41%), Gaps = 75/354 (21%)
Query: 30 DAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHL 89
D K++ +++ S +Q+ML R+KLP++QMR+ +++ VR++ +T+ISGETGSG
Sbjct: 585 DPMSKEKWLQRQDSSSWQKMLAKREKLPAWQMREQIVNTVRDHHVTIISGETGSG----- 639
Query: 90 DFITLKRSETQQYPNDVLNMLKDPELEGVNNDVIFS-------LLQHICTTQRPGAILVY 142
K +++ Q+ +L+ L EL N ++ L +R +
Sbjct: 640 -----KSTQSVQF---ILDDLYSKELGNCANMIVTQPRRISALGLADRVAEERCSRVGDE 691
Query: 143 CTYTFMGVSPMK-----VFFCKNVLQRLMKGVGANSPKRWVKLLRSMLVVPILVFLPGWD 197
Y G S F VL R ++ G R ++ ++ V ++
Sbjct: 692 VGYAIRGESRQSRDTKITFVTTGVLLRRLQTSGG----RVDDVVSALADVSHVI------ 741
Query: 198 TINSLHRSMCQSSFF----------NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
I+ +H + F + ++I + + L + K F + EG+R V
Sbjct: 742 -IDEVHERSLDTDFLLNLIREVMRRDRDMLKLILMSATLDAATFKGYFAS--EGLR--VG 796
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKR 307
+ IA + +DD Y+ D +M+ F+ E + AN G+ +++
Sbjct: 797 SVEIAGRTYPVDD-YYLDDV--IRMTGFNA---------ETTAEANGLVSDESMGKIIQK 844
Query: 308 SETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTIN 361
+ N + +K + E + ++PG IL+FLPG IN
Sbjct: 845 LGHRINYNLISEAVKAIDYE-------------LSYDKKPGGILIFLPGVGEIN 885
>gi|402585994|gb|EJW79933.1| hypothetical protein WUBG_09158, partial [Wuchereria bancrofti]
Length = 433
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 56/118 (47%), Positives = 72/118 (61%), Gaps = 1/118 (0%)
Query: 188 PILVFLPGWDTINSLHRSM-CQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIV 246
+L+FLPGW+ I L + F N SRF I+PLHS L Q+ +F GVRKI+
Sbjct: 299 AVLIFLPGWNVIQLLFNFLKSHPVFSNESRFVILPLHSQLTGQEQRRVFECYSSGVRKII 358
Query: 247 LATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT 304
L+TNIAETSITIDD+VYV+D K + + +N+ W S + QRRGRAGRT
Sbjct: 359 LSTNIAETSITIDDVVYVIDSCKVREKMYTSYNNMVHYATVWASRTSIVQRRGRAGRT 416
Score = 45.4 bits (106), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 24/32 (75%)
Query: 53 RKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
R+ LP YQ RD ++D +RNN +T++ GETG G
Sbjct: 27 RELLPVYQYRDQLIDTIRNNSVTIVKGETGCG 58
>gi|302803538|ref|XP_002983522.1| hypothetical protein SELMODRAFT_234253 [Selaginella moellendorffii]
gi|300148765|gb|EFJ15423.1| hypothetical protein SELMODRAFT_234253 [Selaginella moellendorffii]
Length = 868
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 56/118 (47%), Positives = 76/118 (64%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLHRSMCQS---SFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
+LVFLPG I+ L + S S + R ++ LH L + QK +F PP GVRK+
Sbjct: 361 VLVFLPGMMEISKLQARLQNSKQLSAYGVERKWVLALHGSLSSEQQKRVFVRPPRGVRKV 420
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
VLATN+AETSITIDDI+YV+D G+ K ++D ++ L+ W+S A+ KQR GRAGR
Sbjct: 421 VLATNVAETSITIDDILYVIDTGRHKEMSYDHSKGLSCLQETWVSKASCKQRAGRAGR 478
Score = 39.3 bits (90), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 31/52 (59%)
Query: 33 FKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
K + R SR+Y +++ +R+ LP ++ + +L + N +T+I GETG G
Sbjct: 44 LKDDWERLQTSRQYADIMTSRRSLPVFKRKSEILAGISCNPVTIICGETGCG 95
>gi|422295292|gb|EKU22591.1| helicase domain-containing protein [Nannochloropsis gaditana
CCMP526]
Length = 763
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 56/116 (48%), Positives = 75/116 (64%), Gaps = 1/116 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
+LVF G+ IN L + M + N R Q PLHS LP+ +Q+++F P+GV KIV+
Sbjct: 421 VLVFFSGFQEINELCKLMAAHAVLGNPKRVQAYPLHSSLPSDAQRAVFRRMPKGVTKIVV 480
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
ATNIAETSITIDDI V+D G+ K +D + ++++L W S A A QR GRAGR
Sbjct: 481 ATNIAETSITIDDISSVIDSGRVKEMRYDAETHMSSLVSVWTSQAAASQRAGRAGR 536
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 38/57 (66%)
Query: 28 VLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
L K+ + R +++R Y+EML AR++LP + MR+ V+ +V N + V+SG TGSG
Sbjct: 91 ALSRMLKQRLERVMETRGYREMLWARERLPIWSMREEVVRLVEENTVIVLSGATGSG 147
>gi|452981173|gb|EME80933.1| hypothetical protein MYCFIDRAFT_78643 [Pseudocercospora fijiensis
CIRAD86]
Length = 1439
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 73/115 (63%), Gaps = 1/115 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPG I L+ + F S +QI PLHS + Q++ F PP GVRKIVLA
Sbjct: 917 ILVFLPGIAEIRQLNDMLVGHPKF-SKAWQIFPLHSSFSSEDQQAAFEIPPRGVRKIVLA 975
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAET ITI D+ V+D GK K FD + ++ L +I+ ANAKQRRGRAGR
Sbjct: 976 TNIAETGITIPDVTCVIDTGKHKEMRFDERRQMSRLIQSFIAKANAKQRRGRAGR 1030
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 34/51 (66%)
Query: 39 RKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHL 89
RK+ + +YQ+ML AR LP + RDA L+ ++ +Q+T++ GETG G L
Sbjct: 627 RKVSTSKYQQMLIARMNLPMFHFRDAALETIQKHQVTILCGETGCGKSTQL 677
>gi|256081513|ref|XP_002577014.1| ATP-dependent RNA Helicase [Schistosoma mansoni]
gi|353229477|emb|CCD75648.1| putative atp-dependent RNA helicase [Schistosoma mansoni]
Length = 1006
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 98/170 (57%), Gaps = 15/170 (8%)
Query: 180 LLRSMLVVPILVFLPGWDTINSLHRSMCQSSFFNSSRF-------QIIPLHSMLPTVSQK 232
+L+S ILVF+PG I + R + + N R+ +I PLHS +PT +
Sbjct: 457 ILQSTQSGAILVFVPGLVDIKDVIRCLRE---LNPRRYDNRYGSVRIYPLHSRIPTSRDR 513
Query: 233 SIFNTPPEGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLA 292
S+F P+ RK+V+ATNIAETSITI D+VYV+DCG+ K++++D + N +TL +S A
Sbjct: 514 SLFEPSPKNQRKVVIATNIAETSITIQDVVYVIDCGRIKVTDYDPRQNTSTLTAILVSKA 573
Query: 293 NAKQRRGRAGRTLKRSETQQYP----NDVLNMLKDPELEGVN-NDVIFSL 337
NA QR GRAGR +P N+V++ PE+ V DVI +
Sbjct: 574 NAAQRSGRAGRVQPGICYHLFPSYVYNNVMSDFLQPEMLRVRLEDVILRI 623
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 41/66 (62%)
Query: 19 TRQKLLNDPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVIS 78
T++ L +P +D M + S Y +M E+R KLP+YQ ++ ++ +R+NQ+ +IS
Sbjct: 139 TKESLARNPDIDHELCLSMRNCMSSAAYMKMSESRCKLPAYQFKEDIVSTIRDNQVVIIS 198
Query: 79 GETGSG 84
GETG G
Sbjct: 199 GETGCG 204
>gi|330907738|ref|XP_003295920.1| hypothetical protein PTT_03730 [Pyrenophora teres f. teres 0-1]
gi|311332363|gb|EFQ95988.1| hypothetical protein PTT_03730 [Pyrenophora teres f. teres 0-1]
Length = 1470
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 59/115 (51%), Positives = 75/115 (65%), Gaps = 1/115 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPG I L+ + FN++ + I PLHS + + Q++ F PP GVRKIVLA
Sbjct: 947 VLVFLPGIAEIRQLNDILAGHPAFNTNWY-IYPLHSTISSEDQQAAFLVPPPGVRKIVLA 1005
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAET +TI DI V+D GK K FD + ++ L +IS ANAKQRRGRAGR
Sbjct: 1006 TNIAETGVTIPDITCVIDIGKHKEMRFDERRQLSRLTQSFISRANAKQRRGRAGR 1060
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 46 YQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
YQ ML R LP + ++++L V NQ+T+I GETG G
Sbjct: 660 YQHMLVGRMNLPVFGFKESILSTVDKNQVTIICGETGCG 698
>gi|346321843|gb|EGX91442.1| DEAD/DEAH box helicase [Cordyceps militaris CM01]
Length = 1375
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 62/140 (44%), Positives = 83/140 (59%), Gaps = 6/140 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL+FLPG I R++ ++PLH+ L T QK +F + P G RK+V+A
Sbjct: 858 ILIFLPGVGEIGQACRALQAIP-----SLHVLPLHASLETREQKRVFASAPHGKRKVVVA 912
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TN+AETSITIDDIV V+D GK K ++FD +N+ L+ W S A KQRRGRAGR
Sbjct: 913 TNVAETSITIDDIVAVIDSGKVKETSFDPGNNMRKLEETWASRAACKQRRGRAGRVQDGK 972
Query: 309 ETQQYPNDVLN-MLKDPELE 327
+ Y ++ N M + PE E
Sbjct: 973 CYKLYTQNLENQMAERPEPE 992
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 40/55 (72%)
Query: 30 DAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
DA ++ IR+ ++ Y++ML R+KLP++QMR ++ V +N +T+ISGETGSG
Sbjct: 571 DARSREAWIRRQEASAYKDMLSKRQKLPAWQMRQKIVQTVMDNHVTIISGETGSG 625
>gi|189211101|ref|XP_001941881.1| ATP-dependent RNA helicase A [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187977974|gb|EDU44600.1| ATP-dependent RNA helicase A [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 1469
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 59/115 (51%), Positives = 75/115 (65%), Gaps = 1/115 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPG I L+ + FN++ + I PLHS + + Q++ F PP GVRKIVLA
Sbjct: 946 VLVFLPGIAEIRQLNDILAGHPAFNTNWY-IYPLHSTISSEDQQAAFLVPPPGVRKIVLA 1004
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAET +TI DI V+D GK K FD + ++ L +IS ANAKQRRGRAGR
Sbjct: 1005 TNIAETGVTIPDITCVIDIGKHKEMRFDERRQLSRLTQSFISRANAKQRRGRAGR 1059
Score = 42.4 bits (98), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 46 YQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
YQ ML R LP + ++++L V NQ+T+I GETG G
Sbjct: 659 YQHMLVGRMNLPVFGFKESILSTVDKNQVTIICGETGCG 697
>gi|126316693|ref|XP_001381009.1| PREDICTED: ATP-dependent RNA helicase DHX29 [Monodelphis domestica]
Length = 1369
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 78/116 (67%), Gaps = 1/116 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSS-FFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
+L+FLPG I L+ + F++ R+++I LHS+L T Q + F PP GVRKIVL
Sbjct: 868 VLIFLPGLAHIQQLYDLLSNDRRFYSKERYKLIALHSILSTQDQAAAFTLPPPGVRKIVL 927
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
ATNIAET ITI D+V+V+D G+TK + + +++L ++S A+A QR+GRAGR
Sbjct: 928 ATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGR 983
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 41/51 (80%), Gaps = 1/51 (1%)
Query: 35 KEMIRKLQSR-RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+ + RKLQS RYQ++L+ R++LP ++ R+++++ ++ +++ V++GETGSG
Sbjct: 548 RNLFRKLQSTPRYQKLLKERQQLPVFKHRNSIVETLKRHRVVVVAGETGSG 598
>gi|242817653|ref|XP_002487000.1| DEAD/DEAH box helicase, putative [Talaromyces stipitatus ATCC
10500]
gi|218713465|gb|EED12889.1| DEAD/DEAH box helicase, putative [Talaromyces stipitatus ATCC
10500]
Length = 1345
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 73/115 (63%), Gaps = 5/115 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL+FLPG ++ C ++ +PLH+ L QK +FN P+G RK++ A
Sbjct: 830 ILIFLPG-----TMEIDRCLNAIRAVPNLHALPLHASLLPAEQKRVFNPAPKGKRKVIAA 884
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TN+AETSITIDD+V V+D G+ K ++FD KDN+ L+ W S A KQRRGRAGR
Sbjct: 885 TNVAETSITIDDVVAVIDTGRVKETSFDPKDNVVKLQEVWASQAACKQRRGRAGR 939
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 33/56 (58%)
Query: 29 LDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
L +K+ K S +M R+ LP++ M+++++ V Q+T+ISGETGSG
Sbjct: 538 LGITLRKDWESKKTSAAQIKMNRQRQSLPAWAMQESIIQCVNTYQVTIISGETGSG 593
>gi|453083090|gb|EMF11136.1| P-loop containing nucleoside triphosphate hydrolase protein
[Mycosphaerella populorum SO2202]
Length = 1583
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/120 (47%), Positives = 75/120 (62%), Gaps = 5/120 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-----NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVR 243
IL FLPG I++ + Q F ++S+F+I+PLHS +P QK IF P G R
Sbjct: 1005 ILAFLPGLQEISATMEFLVQHPIFGVDFNDTSKFKIMPLHSSIPPDQQKLIFEPSPPGCR 1064
Query: 244 KIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
KI+LATNIAETS+T+ D+ YVVD GK + +D I L+ W S +NA+QR GRAGR
Sbjct: 1065 KIILATNIAETSVTVPDVKYVVDLGKLREKRYDQVKRITELQTVWESNSNARQRAGRAGR 1124
>gi|47210322|emb|CAF91170.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1297
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/201 (38%), Positives = 105/201 (52%), Gaps = 39/201 (19%)
Query: 116 EGVNNDVIFSLLQHICTTQRPG----AILVYCTYTFMGVSPMKVFFCKNVLQRLMKGVGA 171
E V+ D+I LL +IC+T G +I C LM G+
Sbjct: 505 ELVDLDLIMDLLHYICSTSSDGEPSASIDQMC---------------------LMDPCGS 543
Query: 172 NSPKRWVKLLRSMLVVPILVFLPGWDTINSLH-RSMCQSSFFN--SSRFQIIPLHSMLPT 228
S + LL + +L+FLPG+D I S+ R + + F+ S R+Q+ LHS + T
Sbjct: 544 LSTRSICLLLGA-----VLIFLPGYDEIVSIRDRILYNDNRFSLQSERYQLFILHSEMQT 598
Query: 229 VSQKSIFNTPPEGVRKIVLATNIAETSITIDDIVYVVDCGKTK------MSNFDVKDNIA 282
QK PP GVRKI+L+TNIAETSITI D+V+V+D GK +FD ++
Sbjct: 599 QDQKKALKNPPAGVRKIILSTNIAETSITISDVVFVIDSGKGSKCPFSLKKSFDTLSRVS 658
Query: 283 TLKPEWISLANAKQRRGRAGR 303
LK WIS A+A QR+GRAGR
Sbjct: 659 MLKTVWISKASALQRKGRAGR 679
>gi|395334189|gb|EJF66565.1| P-loop containing nucleoside triphosphate hydrolase protein
[Dichomitus squalens LYAD-421 SS1]
Length = 1468
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/116 (48%), Positives = 77/116 (66%), Gaps = 1/116 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSS-RFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
IL+F+PG I L+ + + F++ +F+I PLHS + + Q ++F+ PP GVRKIV+
Sbjct: 939 ILIFMPGMGEIRRLNDMLMEHRVFSAEDQFRIYPLHSTISSEQQGAVFDIPPPGVRKIVI 998
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
ATNIAET ITI DI V+D GK + FD K I+ L +I+ +NA QRRGRAGR
Sbjct: 999 ATNIAETGITIPDITCVIDTGKHREMRFDEKRQISRLVETFIAKSNAAQRRGRAGR 1054
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 34/54 (62%), Gaps = 4/54 (7%)
Query: 35 KEMIRKLQSRR----YQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+++I Q+R+ YQEML+ R +LP + +L ++ +QI V+SGETG G
Sbjct: 614 EQIIADFQARQASPAYQEMLKQRNQLPMAHYKQDLLSLLEMSQILVLSGETGCG 667
>gi|424513353|emb|CCO65975.1| predicted protein [Bathycoccus prasinos]
Length = 1419
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/246 (32%), Positives = 117/246 (47%), Gaps = 61/246 (24%)
Query: 93 TLKRSETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC-TTQRPGAILVYCTYTFMGVS 151
+LKRS +YP VL+ L++ + E +N +++ LL+ I TT + GA
Sbjct: 793 SLKRS--GRYPEGVLHALRNLDEEKINYELVVELLEKIVQTTPQEGA------------- 837
Query: 152 PMKVFFCKNVLQRLMKGVGANSPKRWVKLLRSMLVVPILVFLPGWDTINSLHRSMCQSSF 211
ILVF+PG I LH S S
Sbjct: 838 -------------------------------------ILVFMPGLAEIQKLHESCAASRV 860
Query: 212 F---NSSRFQIIPLHSMLPTVSQKSIFNTP-PEGVRKIVLATNIAETSITIDDIVYVVDC 267
+ +I LHS L T F+ P + RKI+++TNIAETSITIDD+VYV+D
Sbjct: 861 LFKATDNGTYLIALHSALATSESTIAFDKPKSKSSRKIIISTNIAETSITIDDVVYVLDS 920
Query: 268 GKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT----LKRSETQQYPNDVLNMLKD 323
GK K + +D + LK +WIS A+AKQRRGRAGR R +++Y ++V ++
Sbjct: 921 GKVKENGYDPSTRMLQLKEQWISRASAKQRRGRAGRVQPGQCYRLYSRRYHDEVFAERQE 980
Query: 324 PELEGV 329
E++ V
Sbjct: 981 AEIKRV 986
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 44/69 (63%), Gaps = 4/69 (5%)
Query: 304 TLKRSETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC-TTQRPGAILVFLPGWDTINS 362
+LKRS +YP VL+ L++ + E +N +++ LL+ I TT + GAILVF+PG I
Sbjct: 793 SLKRS--GRYPEGVLHALRNLDEEKINYELVVELLEKIVQTTPQEGAILVFMPGLAEIQK 850
Query: 363 LHRSMCQSS 371
LH S C +S
Sbjct: 851 LHES-CAAS 858
Score = 45.1 bits (105), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%)
Query: 32 AFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHL 89
A K ++ KL + M++ R++LPS+ R A+++ + NQ+ V+ GETG G L
Sbjct: 539 ALKSQLENKLMQKESDPMMKVRERLPSWSKRHALIEAIERNQVCVVVGETGCGKTTQL 596
>gi|471914298|emb|CCO26779.1| putative ATP-dependent RNA helicase DHX36 [Rhizoctonia solani AG-1
IB]
Length = 1334
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/122 (44%), Positives = 76/122 (62%), Gaps = 7/122 (5%)
Query: 189 ILVFLPGWDTINSLHR-------SMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEG 241
ILVFLPGWD + SL + ++ FN +F + LHS +P Q+ +F+ P G
Sbjct: 739 ILVFLPGWDEMMSLQKILDDRRHALLGIDLFNRDKFTLHLLHSTVPVSEQQVVFDPPQPG 798
Query: 242 VRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRA 301
+R+I+LATNIAETSITI D+VYVVD + K +D ++++L W+ +N QR GRA
Sbjct: 799 IRRIILATNIAETSITIPDVVYVVDTARIKEKRYDPTRHMSSLVSAWVGSSNLNQRAGRA 858
Query: 302 GR 303
GR
Sbjct: 859 GR 860
>gi|395510298|ref|XP_003759415.1| PREDICTED: ATP-dependent RNA helicase DHX29 [Sarcophilus harrisii]
Length = 1341
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/116 (45%), Positives = 78/116 (67%), Gaps = 1/116 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSS-FFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
+L+FLPG I L+ + F++ R+++I LHS+L T Q + F PP G+RKIVL
Sbjct: 840 VLIFLPGLAHIQQLYDLLSNDRRFYSKDRYKLIALHSILSTQDQAAAFTIPPPGIRKIVL 899
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
ATNIAET ITI D+V+V+D G+TK + + +++L ++S A+A QR+GRAGR
Sbjct: 900 ATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGR 955
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 41/51 (80%), Gaps = 1/51 (1%)
Query: 35 KEMIRKLQSR-RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+ + RKLQS +YQ++L+ R++LP ++ R+++++ ++ +++ V++GETGSG
Sbjct: 520 RNLFRKLQSTPKYQKLLKERQQLPVFRHRNSIVETLKRHRVVVVAGETGSG 570
>gi|348677587|gb|EGZ17404.1| hypothetical protein PHYSODRAFT_314777 [Phytophthora sojae]
Length = 1161
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/119 (47%), Positives = 79/119 (66%), Gaps = 5/119 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGW+ I+ + R++ S ++ ++I LHS L Q+ F TPP G RK+VLA
Sbjct: 577 ILVFLPGWEEISFMERALLNSPA-TAATYEIALLHSRLSAQEQRRAFMTPPHGKRKLVLA 635
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDN----IATLKPEWISLANAKQRRGRAGR 303
TNIAETS+TI+D+V+VVDCGK+K ++ + + L+ W++ AN QR GRAGR
Sbjct: 636 TNIAETSLTIEDVVFVVDCGKSKQAHALAATSSSSFVMGLQTTWVARANCVQRTGRAGR 694
>gi|121698146|ref|XP_001267729.1| ATP dependent RNA helicase, putative [Aspergillus clavatus NRRL 1]
gi|119395871|gb|EAW06303.1| ATP dependent RNA helicase, putative [Aspergillus clavatus NRRL 1]
Length = 1460
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/130 (47%), Positives = 81/130 (62%), Gaps = 5/130 (3%)
Query: 178 VKLLRSMLVVP----ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKS 233
VKL + ++P ILVF+PG I L+ + F +S + + LHS + + Q+
Sbjct: 931 VKLATTPEMIPYSKAILVFMPGMAEIRRLNDEILSDPVFQTS-WIVHALHSSIASEDQEK 989
Query: 234 IFNTPPEGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLAN 293
FN PPEG+RKIV+ATNIAET ITI DI V+D GK K FD + ++ L +IS AN
Sbjct: 990 AFNVPPEGMRKIVIATNIAETGITIPDITAVIDTGKEKSMRFDERRQLSRLVETFISRAN 1049
Query: 294 AKQRRGRAGR 303
AKQRRGRAGR
Sbjct: 1050 AKQRRGRAGR 1059
>gi|358331846|dbj|GAA50596.1| ATP-dependent RNA helicase DHX36 [Clonorchis sinensis]
Length = 1092
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 83/131 (63%), Gaps = 10/131 (7%)
Query: 180 LLRSMLVVPILVFLPGWDTINSLHRSMCQSSFFN-------SSRFQIIPLHSMLPTVSQK 232
LLR+ ILVF+PG I ++ ++ + N S+R I LHS + Q+
Sbjct: 490 LLRTTTKGAILVFVPG---IGAIRETIMKLRDLNPRLYDERSNRVCIYALHSQMTLSKQR 546
Query: 233 SIFNTPPEGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLA 292
+F PPEG RK++++TNIAETS+TI+D+VYV+D G+ K++N+D N +L P +S A
Sbjct: 547 GLFEVPPEGKRKVIVSTNIAETSVTIEDVVYVIDSGRIKITNYDPLSNTNSLSPVLVSRA 606
Query: 293 NAKQRRGRAGR 303
NA QRRGRAGR
Sbjct: 607 NAAQRRGRAGR 617
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 29 LDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
LD+ ++ RK S Y++ML+ R+KLP+Y R ++D VR+NQ+ VISGETG G
Sbjct: 182 LDSTLASDLCRKHSSEAYRQMLQIRQKLPAYVRRKEIIDAVRSNQVVVISGETGCG 237
>gi|171677410|ref|XP_001903656.1| hypothetical protein [Podospora anserina S mat+]
gi|170936773|emb|CAP61431.1| unnamed protein product [Podospora anserina S mat+]
Length = 1513
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/115 (51%), Positives = 75/115 (65%), Gaps = 1/115 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPG I +L+ + FF + + + PLHS + T Q++ F PP GVRKIVLA
Sbjct: 977 ILVFLPGIAEIRTLNDMLLGDKFF-AENWLVYPLHSSIATEEQEAAFLVPPPGVRKIVLA 1035
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAET ITI D+ V+D GK + FD + ++ L +IS ANAKQRRGRAGR
Sbjct: 1036 TNIAETGITIPDVTCVIDTGKHREMRFDERRQLSRLIDTFISRANAKQRRGRAGR 1090
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 34/47 (72%)
Query: 38 IRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
++K Q+ R+Q ML++R +LP +Q R+ V++ V NQ+ ++ GETG G
Sbjct: 680 LQKAQTPRFQVMLQSRVQLPMWQFREQVVNAVEQNQVVIVCGETGCG 726
>gi|512206044|gb|EPE34864.1| P-loop containing nucleoside triphosphate hydrolase [Glarea
lozoyensis ATCC 20868]
Length = 1478
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/120 (50%), Positives = 76/120 (63%), Gaps = 1/120 (0%)
Query: 184 MLVVPILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVR 243
M ILVFLPG I L+ + F ++ +Q+ PLHS + + Q++ F PP GVR
Sbjct: 963 MYSKAILVFLPGIGEIRQLNDMLVGHPVF-AANWQVYPLHSTIASEDQEAAFLVPPPGVR 1021
Query: 244 KIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
KIVLATNIAET ITI D+ VVD GK + FD + ++ L +IS ANAKQRRGRAGR
Sbjct: 1022 KIVLATNIAETGITIPDVTCVVDTGKHREMRFDERRQLSRLLETFISKANAKQRRGRAGR 1081
Score = 42.0 bits (97), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 32/53 (60%)
Query: 32 AFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
A+++ K ++ +Q ML++R +LP + +D VL + Q+ +I GETG G
Sbjct: 663 AYQRIWFEKSNTQSFQYMLQSRMQLPMWGFKDKVLSTIDQQQVVIICGETGCG 715
>gi|412986548|emb|CCO14974.1| predicted protein [Bathycoccus prasinos]
Length = 1670
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/119 (47%), Positives = 73/119 (61%), Gaps = 3/119 (2%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSR---FQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
L+F+PG I L R + QS S +PL+ L Q+ IF P GVRKI
Sbjct: 1131 FLIFMPGQAEILKLIRVLEQSRLLEVSEVGELDFLPLYGQLSAAEQRRIFQKPRLGVRKI 1190
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT 304
V+ATNIAETS+TIDDI YV+D G+ K +D + ++ L+ W+S A AKQRRGRAGRT
Sbjct: 1191 VVATNIAETSVTIDDIRYVIDTGRQKEMRYDSERGLSCLEDCWVSKAQAKQRRGRAGRT 1249
>gi|212530752|ref|XP_002145533.1| DEAD/DEAH box helicase, putative [Talaromyces marneffei ATCC 18224]
gi|210074931|gb|EEA29018.1| DEAD/DEAH box helicase, putative [Talaromyces marneffei ATCC 18224]
Length = 1346
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 73/115 (63%), Gaps = 5/115 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL+FLPG ++ C ++ +PLH+ L QK +FN P+G RK++ A
Sbjct: 830 ILIFLPG-----TMEIDRCLNAIKAIPNLHALPLHASLLPADQKRVFNPAPKGKRKVIAA 884
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TN+AETSITIDD+V V+D G+ K ++FD KDN+ L+ W S A KQRRGRAGR
Sbjct: 885 TNVAETSITIDDVVAVIDTGRVKETSFDPKDNVVKLQEVWASQAACKQRRGRAGR 939
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 27/36 (75%)
Query: 49 MLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
M R+ LP++ M++A++ V + Q+T+ISGETGSG
Sbjct: 559 MNRQRQSLPAWAMQEAIIQCVNSYQVTIISGETGSG 594
>gi|315053064|ref|XP_003175906.1| ATP-dependent RNA helicase DHX8 [Arthroderma gypseum CBS 118893]
gi|311341221|gb|EFR00424.1| ATP-dependent RNA helicase DHX8 [Arthroderma gypseum CBS 118893]
Length = 1377
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/140 (44%), Positives = 83/140 (59%), Gaps = 6/140 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL+FLPG ++ C SS + ++PLH+ L QK +FN PP G+RK++ A
Sbjct: 869 ILIFLPG-----TMEIDRCLSSMKHLHFAHLLPLHASLLPSEQKRVFNAPPPGMRKVIAA 923
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TN+AETSITI+DIV V+D G+ K + ++ DNI L+ W S A KQRRGRAGR +
Sbjct: 924 TNVAETSITIEDIVAVIDTGRVKETRYNPVDNIVRLEETWASQAACKQRRGRAGRVRNGT 983
Query: 309 ETQQYP-NDVLNMLKDPELE 327
+ Y N NM PE E
Sbjct: 984 CFKLYTRNAEKNMASRPEPE 1003
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 46/82 (56%), Gaps = 22/82 (26%)
Query: 5 HSPKGLTHS--VTSWETRQKLLNDPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMR 62
H PK LT SWET+Q + Q+ML+AR+ LP++ ++
Sbjct: 580 HRPKKLTSDDIRRSWETKQ--------------------TTPEQQKMLKARQSLPAWDIQ 619
Query: 63 DAVLDMVRNNQITVISGETGSG 84
DA+LD V ++Q+T+ISGETGSG
Sbjct: 620 DAILDEVHSHQVTIISGETGSG 641
>gi|296815954|ref|XP_002848314.1| pre-mRNA-splicing factor ATP-dependent RNA helicase prp22
[Arthroderma otae CBS 113480]
gi|238841339|gb|EEQ31001.1| pre-mRNA-splicing factor ATP-dependent RNA helicase prp22
[Arthroderma otae CBS 113480]
Length = 1355
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/171 (40%), Positives = 94/171 (54%), Gaps = 9/171 (5%)
Query: 161 VLQRLMKGVGANSPKRWVKLLRSMLVVP---ILVFLPGWDTINSLHRSMCQSSFFNSSRF 217
+QRL G+ + V+ + S L IL+FLPG ++ C SS +
Sbjct: 816 TIQRLGGGINYDLISSTVQHIDSQLGDEPGGILIFLPG-----TMEIDRCLSSMRHLHFA 870
Query: 218 QIIPLHSMLPTVSQKSIFNTPPEGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDV 277
++PLH+ L QK +F PP+G RK++ ATN+AETSITIDDIV V+D G+ K + ++
Sbjct: 871 HLLPLHASLLPSEQKRVFYAPPQGKRKVIAATNVAETSITIDDIVAVIDTGRVKETRYNP 930
Query: 278 KDNIATLKPEWISLANAKQRRGRAGRTLKRSETQQYP-NDVLNMLKDPELE 327
DNI L+ W S A KQRRGRAGR + + Y N NM PE E
Sbjct: 931 VDNIVRLEETWASQAACKQRRGRAGRVRNGTCYKLYTRNAEQNMASRPEPE 981
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 32/38 (84%)
Query: 47 QEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
Q ML+AR+ LP++ ++D +LD V ++Q+T++SGETGSG
Sbjct: 582 QNMLKARQSLPAWDIQDEILDEVYSHQVTIVSGETGSG 619
>gi|158297255|ref|XP_555531.3| AGAP007953-PA [Anopheles gambiae str. PEST]
gi|157015106|gb|EAL39691.3| AGAP007953-PA [Anopheles gambiae str. PEST]
Length = 875
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/136 (44%), Positives = 80/136 (58%), Gaps = 12/136 (8%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPG++ I + + S N ++ LHS + T Q S+F P GVRKI+L+
Sbjct: 384 ILVFLPGFEDIQEQY-GLLNSKVSNIHCIRMFMLHSKMQTADQHSVFKPVPSGVRKIILS 442
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT---- 304
TNIAETSIT+DD+VYV+D GK K +D + ++L WIS A A QR GRAGRT
Sbjct: 443 TNIAETSITMDDVVYVIDSGKVKQKYYDSLTSTSSLAATWISQACATQRAGRAGRTRPGT 502
Query: 305 -------LKRSETQQY 313
++ SE QY
Sbjct: 503 CFRLYSRMRHSEMDQY 518
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 31/56 (55%)
Query: 48 EMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHLDFITLKRSETQQYP 103
E++ RK LP Q + +L +++NQ+ +ISG TGSG + L+ + Q P
Sbjct: 14 EIVAVRKSLPIAQFHEIILKCIQHNQVIIISGNTGSGKTTQVPQFILEEAAQQNLP 69
>gi|521769165|gb|EPQ61668.1| helicase [Blumeria graminis f. sp. tritici 96224]
Length = 1269
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/119 (49%), Positives = 77/119 (64%), Gaps = 5/119 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQS----SFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRK 244
IL FLPG + + + + Q +F N+S ++II LHS++ T +Q +F PP G RK
Sbjct: 716 ILTFLPGLKDLEEVRKHLLQDPLGVNFSNASEYRIILLHSLM-TEAQNIVFEQPPAGCRK 774
Query: 245 IVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
IVLATNIAETSITI D+ YVVD GK ++D I LK WIS +N++QR GRAGR
Sbjct: 775 IVLATNIAETSITIPDVKYVVDTGKLNEMHYDPMTRIKNLKCTWISKSNSRQRAGRAGR 833
Score = 39.3 bits (90), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 52/118 (44%), Gaps = 14/118 (11%)
Query: 41 LQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHLDFITLKRSETQ 100
L++ +Q + E R LP RD VL ++ N +VI GETGSG + I L+ + +
Sbjct: 466 LRNSSFQTIRELRASLPMNMYRDDVLRLIDQNTYSVIVGETGSGKTTQVPAIILEDATLR 525
Query: 101 QYPNDVLNMLKDPE---LEGVNNDVIFSLLQHICTT---------QRP--GAILVYCT 144
++V + P + V V + + + T +RP G + YCT
Sbjct: 526 DMASNVNIICTQPRRIAAQSVARRVAYERGEKLQETVGYHVHMDAKRPPSGGSITYCT 583
>gi|406696886|gb|EKD00157.1| ATP-dependent DEAH-box family RNA helicase, Prp16p [Trichosporon
asahii var. asahii CBS 8904]
Length = 1344
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/116 (50%), Positives = 75/116 (64%), Gaps = 3/116 (2%)
Query: 190 LVFLPGWDTINSLHRSMCQS--SFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
LVF+PG I L+ M QS F S F I PLHS + + Q ++FN PP GVRKIV+
Sbjct: 868 LVFMPGLAEIRKLN-DMLQSHPKFGASGDFVIYPLHSTVSSEGQSAVFNIPPRGVRKIVI 926
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+TNIAET +TI DI V+D GK + +D K ++ L +I+ +NAKQRRGRAGR
Sbjct: 927 STNIAETGVTIPDITCVIDSGKQREMRYDEKRQLSKLVETYIARSNAKQRRGRAGR 982
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 38/69 (55%)
Query: 39 RKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHLDFITLKRSE 98
R++ + YQ ML+AR+ LP RD +L V +Q+ V SGETG G L L+
Sbjct: 555 RRVDTPAYQRMLKARRTLPIASFRDEILRTVDRSQVLVFSGETGCGKSTQLPAYILENEL 614
Query: 99 TQQYPNDVL 107
+Q P +++
Sbjct: 615 SQGRPCNII 623
>gi|241600828|ref|XP_002405209.1| ATP-dependent RNA helicase, putative [Ixodes scapularis]
gi|215502478|gb|EEC11972.1| ATP-dependent RNA helicase, putative [Ixodes scapularis]
Length = 1095
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/115 (46%), Positives = 75/115 (65%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+L+FLPGW+ I +L R + Q F +S++ I+PLHS +P Q +F + V K++L+
Sbjct: 631 VLIFLPGWNLIFALMRHLQQHPTFGTSQYLILPLHSQVPREEQHRVFRPVGDNVTKVILS 690
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+D+VYV+D K KM F +N+ + S N +QRRGRAGR
Sbjct: 691 TNIAETSITINDVVYVIDSCKAKMKLFTSHNNMTNYATVFASKTNLEQRRGRAGR 745
Score = 42.4 bits (98), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 52/116 (44%), Gaps = 18/116 (15%)
Query: 288 WISLANAKQRRGRAGRTLKRSETQQYPNDVLNMLKDPELE-------------GVNNDVI 334
+++ N K+RR ++ E + LN + DP + ++ ++I
Sbjct: 561 FVTPPNTKKRRRDEDEGIETDEPEN-----LNKVIDPSYKQSTRLAMSQLDEKTLSFELI 615
Query: 335 FSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNSCLLYEFAMVDNKPKE 390
+LL HI T GA+L+FLPGW+ I +L R + Q F + + P+E
Sbjct: 616 EALLLHIKTLPEKGAVLIFLPGWNLIFALMRHLQQHPTFGTSQYLILPLHSQVPRE 671
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 18/81 (22%)
Query: 22 KLLNDPVLDAAFKKE-MIRKLQSRRY-----------------QEMLEARKKLPSYQMRD 63
K L P LDA + E ++R L S + +ML+ R +LP Y D
Sbjct: 797 KALEPPPLDAVIESEVLLRGLFSHSFVHLTPGCFSQATFFAPPTQMLDERYQLPVYNSYD 856
Query: 64 AVLDMVRNNQITVISGETGSG 84
++LD + ++ I +I G TG+G
Sbjct: 857 SILDAIHHSPIVIIRGATGNG 877
>gi|401881148|gb|EJT45452.1| ATP-dependent DEAH-box family RNA helicase, Prp16p [Trichosporon
asahii var. asahii CBS 2479]
Length = 1353
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/116 (50%), Positives = 75/116 (64%), Gaps = 3/116 (2%)
Query: 190 LVFLPGWDTINSLHRSMCQS--SFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
LVF+PG I L+ M QS F S F I PLHS + + Q ++FN PP GVRKIV+
Sbjct: 877 LVFMPGLAEIRKLN-DMLQSHPKFGASGDFVIYPLHSTVSSEGQSAVFNIPPRGVRKIVI 935
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+TNIAET +TI DI V+D GK + +D K ++ L +I+ +NAKQRRGRAGR
Sbjct: 936 STNIAETGVTIPDITCVIDSGKQREMRYDEKRQLSKLVETYIARSNAKQRRGRAGR 991
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 38/69 (55%)
Query: 39 RKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHLDFITLKRSE 98
R++ + YQ ML+AR+ LP RD +L V +Q+ V SGETG G L L+
Sbjct: 564 RRVDTPAYQRMLKARRTLPIASFRDEILRTVDRSQVLVFSGETGCGKSTQLPAYILENEL 623
Query: 99 TQQYPNDVL 107
+Q P +++
Sbjct: 624 SQGRPCNII 632
>gi|158296522|ref|XP_316912.4| AGAP008528-PA [Anopheles gambiae str. PEST]
gi|157014750|gb|EAA12175.4| AGAP008528-PA [Anopheles gambiae str. PEST]
Length = 1206
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/262 (31%), Positives = 130/262 (49%), Gaps = 50/262 (19%)
Query: 110 LKDPELEG-------------VNNDVIFSLLQHICTTQRPGAILVYC------------- 143
L+D EL+G ++ DV+F LL+ I +R ++V
Sbjct: 626 LRDKELDGYSVIIMDEAHERSLSTDVLFGLLREIVAKRRDLKLIVTSATMDAGKFSNFFG 685
Query: 144 ---TYTFMGVS-PMKVFFCKNVLQRLMKGVGANSPKRWVKLLRSMLVVP----ILVFLPG 195
T+T G + P+ VF+ KNV + + G VK + + + P ILVF+PG
Sbjct: 686 NVPTFTIPGRTFPVDVFYGKNVCEDYVDGA--------VKQVLQIHLQPTEGDILVFMPG 737
Query: 196 WDTINSLHRSMCQ--SSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLATNIAE 253
+ I + + N+ I+P++S LP+ Q IF+ +G RK V+ATNIAE
Sbjct: 738 QEDIEVTCEVLAERLGEIDNAPELSILPIYSQLPSDLQAKIFHRSADGTRKCVVATNIAE 797
Query: 254 TSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT-----LKRS 308
TS+T+D I YV+D G K+ ++ + + L+ IS ANA QR GRAGRT +
Sbjct: 798 TSLTVDGITYVIDSGYCKLKVYNPRIGMDALQIYPISQANANQRSGRAGRTGPGQAFRLY 857
Query: 309 ETQQYPNDVLNMLKDPELEGVN 330
+QY +++L+ L PE++ N
Sbjct: 858 TERQYKDELLH-LTVPEIQRTN 878
>gi|477527001|gb|ENH78854.1| dead deah box [Colletotrichum orbiculare MAFF 240422]
Length = 1346
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/115 (50%), Positives = 75/115 (65%), Gaps = 5/115 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL+FLPG IN C + NSS + ++PLH+ L T QK +F P G RK+V+A
Sbjct: 842 ILIFLPGVAEINQ----TCNALRSNSSLY-VLPLHASLETKEQKRVFAAAPGGKRKVVVA 896
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
T +AETSITIDDIV V+D GK K + +D ++N+ L+ W S A KQRRGRAGR
Sbjct: 897 TIVAETSITIDDIVAVIDSGKVKETTYDPQNNMRKLEENWASQAACKQRRGRAGR 951
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 86/366 (23%), Positives = 151/366 (41%), Gaps = 73/366 (19%)
Query: 30 DAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLH- 88
D ++E +++ Q ++ M+ R+ LP++Q++D ++ V +N +T+ISGETGSG
Sbjct: 555 DPRSREEWMKRQQDPSWRSMITKRQSLPAWQVQDDIVRTVNHNHVTIISGETGSGKSTQS 614
Query: 89 LDFI--TLKRSETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVYCTYT 146
+ FI L + N ++ + G+ + V + CT R G + Y
Sbjct: 615 VQFILDDLYERGLGKCANMLVTQPRRISALGLADRVA----EERCT--RVGDEVGYAIRG 668
Query: 147 FMGVSPMK--VFFCKNVLQRLMKGVGANSPKRWVKLLRSMLVVPILVFLPGWDTINSLHR 204
SP F VL R ++ G R ++ S+ V +V I+ +H
Sbjct: 669 ENRRSPQTRITFVTTGVLLRRLQTSGG----RIEDVIASLADVSHIV-------IDEVHE 717
Query: 205 SMCQSSFF----------NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLATNIAET 254
+ F +++ + + L S KS F + +G+ V NIA
Sbjct: 718 RSLDTDFLLTIVREVMTTRKDLLKLVLMSATLDAASFKSYFAS--QGLS--VGMVNIAGR 773
Query: 255 SITIDDIVYVVDCGKTKMSNF--DVKDNIATLKPEWISLANAKQRRGRA-GRTLKRSETQ 311
+ +DD Y+ D M++F DV D A RG G+T+++ +
Sbjct: 774 TYPVDD-YYIDDI--ISMTDFMGDVGD--------------ADGSRGEGMGKTIQKLGHR 816
Query: 312 QYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSS 371
N + +K+ ++ D+ ++ +PG IL+FLPG IN C +
Sbjct: 817 INYNLITETVKE-----IDADLSYN--------NKPGGILIFLPGVAEIN----QTCNAL 859
Query: 372 FFNSCL 377
NS L
Sbjct: 860 RSNSSL 865
>gi|261190290|ref|XP_002621555.1| ATP dependent RNA helicase [Ajellomyces dermatitidis SLH14081]
gi|239591383|gb|EEQ73964.1| ATP dependent RNA helicase [Ajellomyces dermatitidis SLH14081]
Length = 1466
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/115 (49%), Positives = 73/115 (63%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVF+PG I L+ + S FN + I LHS + + Q+ F PP G+RKIV+A
Sbjct: 949 ILVFMPGMAEIRRLNDEILSESLFNKGDWIIHALHSSIASEDQEKAFLIPPIGMRKIVIA 1008
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAET ITI DI V+D GK K+ FD + ++ L +I+ ANAKQRRGRAGR
Sbjct: 1009 TNIAETGITIPDITAVIDTGKEKVMRFDERRQLSKLVESFIARANAKQRRGRAGR 1063
Score = 38.5 bits (88), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%)
Query: 38 IRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+++ + + M +RK LP +Q +D +LD + NQ +I ETGSG
Sbjct: 653 VQRSSTSSFASMEFSRKSLPIWQFKDHILDTLAANQAIIICSETGSG 699
>gi|308805210|ref|XP_003079917.1| helicase domain-containing protein (ISS) [Ostreococcus tauri]
gi|116058374|emb|CAL53563.1| helicase domain-containing protein (ISS) [Ostreococcus tauri]
Length = 1216
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/115 (48%), Positives = 73/115 (63%), Gaps = 2/115 (1%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPG + SL + S F + + PLHS L Q+ F P GVRKIV+A
Sbjct: 858 ILVFLPGIGEVTSLVDRLAGSPRFKDA--VLTPLHSALTNAEQREAFRVPRTGVRKIVVA 915
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TN+AETS+TI+DIV V+D G+ K +D + +A+L+ W+S A AKQR GRAGR
Sbjct: 916 TNVAETSVTIEDIVVVIDTGRVKERQWDPRRGMASLEEGWVSRAAAKQRAGRAGR 970
>gi|239606435|gb|EEQ83422.1| ATP dependent RNA helicase [Ajellomyces dermatitidis ER-3]
Length = 1466
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/115 (49%), Positives = 73/115 (63%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVF+PG I L+ + S FN + I LHS + + Q+ F PP G+RKIV+A
Sbjct: 949 ILVFMPGMAEIRRLNDEILSESLFNKGDWIIHALHSSIASEDQEKAFLIPPIGMRKIVIA 1008
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAET ITI DI V+D GK K+ FD + ++ L +I+ ANAKQRRGRAGR
Sbjct: 1009 TNIAETGITIPDITAVIDTGKEKVMRFDERRQLSKLVESFIARANAKQRRGRAGR 1063
Score = 38.5 bits (88), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%)
Query: 38 IRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+++ + + M +RK LP +Q +D +LD + NQ +I ETGSG
Sbjct: 653 VQRSSTSSFASMEFSRKSLPIWQFKDHILDTLAANQAIIICSETGSG 699
>gi|403414197|emb|CCM00897.1| predicted protein [Fibroporia radiculosa]
Length = 1474
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 77/116 (66%), Gaps = 1/116 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQS-SFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
IL+F+PG I L+ + + +F + +F+I PLHS + + Q ++F+ PP G+RKIV+
Sbjct: 949 ILIFMPGMAEIRRLNDMLMEHPAFASDDKFKIYPLHSTISSEHQGAVFDIPPPGIRKIVI 1008
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
ATNIAET ITI DI V+D GK + FD K I+ L +++ +NA QRRGRAGR
Sbjct: 1009 ATNIAETGITIPDITCVIDTGKHREMRFDEKRQISRLIETYVAKSNAAQRRGRAGR 1064
Score = 42.0 bits (97), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 34/54 (62%), Gaps = 4/54 (7%)
Query: 35 KEMIRKLQSRR----YQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+++I Q+R+ YQEML R +LP + R+ + ++ +QI V+SGETG G
Sbjct: 623 EQVIAGFQARQSSTAYQEMLRQRDQLPIARYRNEITSILDTSQILVLSGETGCG 676
>gi|171692321|ref|XP_001911085.1| hypothetical protein [Podospora anserina S mat+]
gi|170946109|emb|CAP72910.1| unnamed protein product [Podospora anserina S mat+]
Length = 1175
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/115 (50%), Positives = 76/115 (66%), Gaps = 5/115 (4%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL+FLPG IN C + + S ++ LH+ L T QK +F +PP G RKIV+A
Sbjct: 668 ILIFLPGVAEINR----AC-NVLRSVSSLHVLQLHASLETKEQKKVFLSPPPGKRKIVVA 722
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TN+AETSITIDDIV V+D G+ K ++FD ++N+ L+ W S A KQRRGRAGR
Sbjct: 723 TNVAETSITIDDIVAVIDSGRVKETSFDPQNNMRKLEETWASRAACKQRRGRAGR 777
>gi|524916762|ref|XP_005113151.1| PREDICTED: ATP-dependent RNA helicase A-like, partial [Aplysia
californica]
Length = 1057
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/108 (47%), Positives = 71/108 (65%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+L FLPGW+ I + + + Q+ F SSR++I+PLHS +P Q+ +F PEGV KI+L+
Sbjct: 461 VLFFLPGWNLIFMMQKHLEQTPEFGSSRYRILPLHSSIPREDQRKVFEPVPEGVTKIILS 520
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQ 296
TNIAETS+TIDD+VYV+D K KM F +N+ W S N +Q
Sbjct: 521 TNIAETSVTIDDVVYVIDSCKVKMKLFTSHNNMTNYATVWASKTNLEQ 568
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 318 LNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNSCL 377
++M + PE E +N D++ SLL++I + PGA+L FLPGW+ I + + + Q+ F S
Sbjct: 430 MSMAQIPEKE-INFDLVESLLRYIKSLNVPGAVLFFLPGWNLIFMMQKHLEQTPEFGSSR 488
Query: 378 LYEFAMVDNKPKE 390
+ + P+E
Sbjct: 489 YRILPLHSSIPRE 501
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 42/84 (50%), Gaps = 14/84 (16%)
Query: 42 QSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHLDFITLKRSETQQ 101
Q M+E R LP + ++ +L+M+R + +T+I GETG G +T Q
Sbjct: 178 QDENLHRMMEKRAGLPVHGSQEYILNMIRQSPVTLIRGETGCG-------------KTTQ 224
Query: 102 YPNDVLNMLKDPELEGVNNDVIFS 125
P +L+ + + +G N ++I +
Sbjct: 225 VPQFILDYMVNAG-QGANCNIIIT 247
>gi|68472233|ref|XP_719912.1| hypothetical protein CaO19.6818 [Candida albicans SC5314]
gi|68472468|ref|XP_719795.1| hypothetical protein CaO19.14110 [Candida albicans SC5314]
gi|46441629|gb|EAL00925.1| hypothetical protein CaO19.14110 [Candida albicans SC5314]
gi|46441755|gb|EAL01050.1| hypothetical protein CaO19.6818 [Candida albicans SC5314]
Length = 1370
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 76/115 (66%), Gaps = 3/115 (2%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL+FLPG I+S + + +SS ++F +PLHS L + QKSIF T P+G RK+V++
Sbjct: 823 ILIFLPGVLEISSTIKEINKSS---DNKFMALPLHSGLTSAEQKSIFKTAPKGKRKVVVS 879
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI D V V+D GK+K FD K N L W S A +QRRGRAGR
Sbjct: 880 TNIAETSITIPDCVAVIDTGKSKNLFFDHKLNTTKLIESWCSQAEVRQRRGRAGR 934
Score = 45.1 bits (105), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 35/51 (68%)
Query: 34 KKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
K+ ++ S ++EML R KLP++ +++++ + + Q+T+I+GETGSG
Sbjct: 551 KESYKKRKHSDEFKEMLIQRSKLPAFAKQESLMTAINSGQVTLITGETGSG 601
>gi|302784188|ref|XP_002973866.1| hypothetical protein SELMODRAFT_173775 [Selaginella moellendorffii]
gi|300158198|gb|EFJ24821.1| hypothetical protein SELMODRAFT_173775 [Selaginella moellendorffii]
Length = 900
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/118 (46%), Positives = 76/118 (64%), Gaps = 3/118 (2%)
Query: 189 ILVFLPGWDTINSLHRSMCQS---SFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
+LVFLPG I+ L + S S + + ++ LH L + QK +F PP GVRK+
Sbjct: 393 VLVFLPGMMEISKLQARLQNSKQLSAYGVEKKWVLALHGSLSSEQQKRVFVRPPRGVRKV 452
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
VLATN+AETSITIDDI+YV+D G+ K ++D ++ L+ W+S A+ KQR GRAGR
Sbjct: 453 VLATNVAETSITIDDILYVIDTGRHKEMSYDHSKGLSCLQETWVSKASCKQRAGRAGR 510
Score = 39.3 bits (90), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 31/52 (59%)
Query: 33 FKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
K + R SR+Y +++ +R+ LP ++ + +L + N +T+I GETG G
Sbjct: 65 LKDDWERLQTSRQYADIMTSRRSLPVFKRKSEILAGISCNPVTIICGETGCG 116
>gi|432885031|ref|XP_004074623.1| PREDICTED: ATP-dependent RNA helicase Dhx29-like [Oryzias latipes]
Length = 1379
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/116 (47%), Positives = 77/116 (66%), Gaps = 1/116 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFLPG I L+ + + F SR++I+ LHS L + Q + F PP GVRKIVL
Sbjct: 880 ILVFLPGLAHIQQLYDLLSSNKRFREKSRYRIVALHSTLSSKDQAAAFTVPPAGVRKIVL 939
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+TNIAET +TI D+V+V+D GKTK + + +++L ++S A+A QR+GRAGR
Sbjct: 940 STNIAETGVTIPDVVFVIDTGKTKENKYHESSQMSSLVETFVSKASALQRQGRAGR 995
>gi|465995909|gb|EMP39906.1| Putative ATP-dependent RNA helicase YTHDC2 [Chelonia mydas]
Length = 1378
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 81/129 (62%), Gaps = 14/129 (10%)
Query: 189 ILVFLPGWDTINSLH-RSMCQSSFF--NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
+L+FLPG+D I L R + F N+ R+Q+ LHS + T QK + TPP G+RKI
Sbjct: 562 VLIFLPGYDEIVGLRDRILFDDKRFADNAHRYQVFMLHSNMQTSDQKKVLKTPPPGIRKI 621
Query: 246 -----------VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANA 294
+L+TNIAETSIT++D+V+V+D GK K +FD + + LK WIS A+A
Sbjct: 622 AITIKKTLLLQILSTNIAETSITVNDVVFVIDSGKMKEKSFDALNCVTMLKMVWISKASA 681
Query: 295 KQRRGRAGR 303
QR+GRAGR
Sbjct: 682 IQRKGRAGR 690
>gi|367041379|ref|XP_003651070.1| hypothetical protein THITE_2111015 [Thielavia terrestris NRRL 8126]
gi|346998331|gb|AEO64734.1| hypothetical protein THITE_2111015 [Thielavia terrestris NRRL 8126]
Length = 1501
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/115 (50%), Positives = 75/115 (65%), Gaps = 1/115 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPG I +L+ + FF + + + PLHS + T Q++ F PP G+RKIVLA
Sbjct: 959 ILVFLPGIAEIRTLNDMLLGDRFF-ADNWLVYPLHSTIATEEQEAAFLIPPPGMRKIVLA 1017
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAET ITI D+ V+D GK + FD + ++ L +IS ANAKQRRGRAGR
Sbjct: 1018 TNIAETGITIPDVTCVIDTGKHREMRFDERRQLSRLVDSFISRANAKQRRGRAGR 1072
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 33/47 (70%)
Query: 38 IRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
++K + ++++MLE+R +LP +Q R V+D V +Q+ +I GETG G
Sbjct: 663 LQKSSTPKFRQMLESRMQLPMWQFRQQVVDAVERDQVVIICGETGCG 709
>gi|320588729|gb|EFX01197.1| dead deah box DNA helicase [Grosmannia clavigera kw1407]
Length = 1480
Score = 110 bits (274), Expect = 2e-21, Method: Composition-based stats.
Identities = 64/151 (42%), Positives = 83/151 (54%), Gaps = 15/151 (9%)
Query: 179 KLLRSMLVVPILVFLPGWDTINSL------HRSMCQSSFFNSSRFQIIPLHSMLPTVSQK 232
+L R+ +LVFLPG IN + R I+PLH+ L T QK
Sbjct: 913 ELTRTNDAGAVLVFLPGVAEINQVCGMLGGGRGGDGGDGDRKDSLYILPLHAGLETREQK 972
Query: 233 SIFNTPPEGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLA 292
+F P G RK+V+ATN+AETSITIDD+V VVD G+ K ++ DV+ + L W+SLA
Sbjct: 973 RVFAAAPTGRRKVVVATNVAETSITIDDVVAVVDTGRVKETSLDVQTGMRRLAETWVSLA 1032
Query: 293 NAKQRRGRAGRT---------LKRSETQQYP 314
AKQRRGRAGR + E+QQ P
Sbjct: 1033 AAKQRRGRAGRVRPGHCYKLYTRALESQQMP 1063
Score = 57.4 bits (137), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 42/55 (76%)
Query: 30 DAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
D +++ +R+ ++ YQ+ML R++LP+++ R+AV+ VR +Q+T+I+GETGSG
Sbjct: 614 DENSRQDWLRRQEAPGYQKMLAQRRRLPAWEAREAVVAAVRMHQVTIIAGETGSG 668
>gi|402077519|gb|EJT72868.1| hypothetical protein GGTG_09720 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 1499
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/115 (51%), Positives = 74/115 (64%), Gaps = 1/115 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPG I L+ + FF S + + PLHS + T Q++ F PP G+RKIVLA
Sbjct: 970 ILVFLPGLAEIRQLNDLLLGDRFF-SDNWLVYPLHSSIATEEQEAAFLVPPPGLRKIVLA 1028
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAET ITI D+ V+D GK + FD + ++ L +IS ANAKQRRGRAGR
Sbjct: 1029 TNIAETGITIPDVTCVIDTGKHREMRFDERRQMSRLIDTFISRANAKQRRGRAGR 1083
Score = 42.0 bits (97), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%)
Query: 45 RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHLDFITLKRSETQQYP 103
R+Q M+ +R +LP + RD VL V Q+ ++ GETG G + L+ +Q P
Sbjct: 680 RFQTMMRSRMQLPMWGFRDQVLSAVDQQQVIIVCGETGCGKSTQVPSFLLEHQLSQGKP 738
>gi|345325634|ref|XP_001513873.2| PREDICTED: ATP-dependent RNA helicase DHX29, partial
[Ornithorhynchus anatinus]
Length = 1316
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/116 (47%), Positives = 78/116 (67%), Gaps = 1/116 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNS-SRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
+L+FLPG I L+ + F+S R+++I LHS+L T Q + F PP GVRKIVL
Sbjct: 815 VLIFLPGLAHIQQLYDLLSTDRRFHSKERYKLIALHSILSTQDQAAAFTLPPLGVRKIVL 874
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
ATNIAET ITI D+V+V+D G+TK + + +++L ++S A+A QR+GRAGR
Sbjct: 875 ATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGR 930
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 40/51 (78%), Gaps = 1/51 (1%)
Query: 35 KEMIRKLQ-SRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+ + RKLQ + +YQ +L+ R++LP ++ R+++++ ++ +++ V++GETGSG
Sbjct: 495 RNLFRKLQGTAKYQRLLKERQQLPVFKHRNSIVETLKRHRVVVVAGETGSG 545
>gi|30694379|ref|NP_175298.2| DEA(D/H)-box RNA helicase family protein [Arabidopsis thaliana]
gi|332194212|gb|AEE32333.1| DEA(D/H)-box RNA helicase family protein [Arabidopsis thaliana]
Length = 1197
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 50/103 (48%), Positives = 70/103 (67%), Gaps = 1/103 (0%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNS-SRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
+LVF+ GWD INSL + S ++ ++ H + + Q+ IF+ PPEG+RKIVL
Sbjct: 581 VLVFMTGWDDINSLKNQLEAHSLLGDPNKVLLLACHGSMASSEQRLIFDRPPEGIRKIVL 640
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWIS 290
ATN+AETSITI+D+VYV+DCGK K +++D +N L P WIS
Sbjct: 641 ATNMAETSITINDVVYVIDCGKAKETSYDALNNTPCLLPSWIS 683
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 1 MKSPHSPKGLTHSVTSWETRQKLLNDPVLDAAFKKEMIRKLQSRRYQ--------EMLEA 52
M +S + L + ++ET + ++ + + + +L+S++ Q +M+
Sbjct: 236 MPRQNSSESLANGYGNYETPETVMQNSLARERILRPRSLQLKSKQQQWVDSPEGQKMVGF 295
Query: 53 RKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHL 89
RK LP+Y+ +DA+L + NQ+ V+SGETG G L
Sbjct: 296 RKTLPAYKEKDALLKAIAANQVVVVSGETGCGKTTQL 332
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 327 EGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFN 374
+ + ++I ++L HI +RPGA+LVF+ GWD INSL + S
Sbjct: 558 DSIGFNLIENVLCHIVKGERPGAVLVFMTGWDDINSLKNQLEAHSLLG 605
>gi|482575317|gb|EOA39504.1| hypothetical protein CARUB_v10008118mg [Capsella rubella]
Length = 1198
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/173 (43%), Positives = 103/173 (59%), Gaps = 14/173 (8%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNS-SRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
+LVF+ GWD INSL + S ++ ++ H + + Q+ IF+ PPEG+RKIVL
Sbjct: 581 VLVFMTGWDDINSLKNQLEAHSLLGDPNKVLLLACHGSMASSEQRLIFDRPPEGIRKIVL 640
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKR 307
ATN+AETSITI+D+VYV+DCGK K +++D +N L P WIS A A+QRRGRAGR +
Sbjct: 641 ATNMAETSITINDVVYVIDCGKAKETSYDALNNTPCLLPSWISKAAARQRRGRAGRVMPG 700
Query: 308 SETQQYPNDVLNMLKD---PELEGVNNDVIFSLLQHIC---TTQRPGAILVFL 354
YP V + D PEL + + LQ +C + R G+I FL
Sbjct: 701 ECYHLYPRCVYDAFADYQQPEL-------LRTPLQSLCLQIKSLRLGSISEFL 746
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 52/94 (55%), Gaps = 8/94 (8%)
Query: 4 PHSPKGLTHSVTSWETRQKLLNDPVLDAAFKKEMIRKLQSRRYQ--------EMLEARKK 55
P+S +GL+ ++E + ++ + + + +L+S++ Q +M+E RK
Sbjct: 239 PNSNEGLSTDYGNYEKPETVMQNSLARERILRPRSLQLRSKQQQWVDSPEGQKMIEFRKT 298
Query: 56 LPSYQMRDAVLDMVRNNQITVISGETGSGPPLHL 89
LP+Y+ +DA+L + NQ+ V+SGETG G L
Sbjct: 299 LPAYKEKDALLKAIAANQVVVVSGETGCGKTTQL 332
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 327 EGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFN 374
+ + ++I ++L HI +RPGA+LVF+ GWD INSL + S
Sbjct: 558 DSIGFNLIENVLCHIVKGERPGAVLVFMTGWDDINSLKNQLEAHSLLG 605
Database: nr
Posted date: Jul 29, 2013 4:40 PM
Number of letters in database: 999,999,530
Number of sequences in database: 2,912,337
Database: /usr2/db/fasta/nr.01
Posted date: Jul 29, 2013 4:44 PM
Number of letters in database: 999,999,206
Number of sequences in database: 2,915,278
Database: /usr2/db/fasta/nr.02
Posted date: Jul 29, 2013 4:48 PM
Number of letters in database: 999,999,473
Number of sequences in database: 3,020,847
Database: /usr2/db/fasta/nr.03
Posted date: Jul 29, 2013 4:52 PM
Number of letters in database: 999,999,754
Number of sequences in database: 2,810,471
Database: /usr2/db/fasta/nr.04
Posted date: Jul 29, 2013 4:55 PM
Number of letters in database: 999,999,790
Number of sequences in database: 2,820,602
Database: /usr2/db/fasta/nr.05
Posted date: Jul 29, 2013 4:59 PM
Number of letters in database: 999,999,923
Number of sequences in database: 2,959,627
Database: /usr2/db/fasta/nr.06
Posted date: Jul 29, 2013 5:03 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,952,296
Database: /usr2/db/fasta/nr.07
Posted date: Jul 29, 2013 5:07 PM
Number of letters in database: 999,999,984
Number of sequences in database: 2,915,919
Database: /usr2/db/fasta/nr.08
Posted date: Jul 29, 2013 5:10 PM
Number of letters in database: 999,999,939
Number of sequences in database: 2,659,462
Database: /usr2/db/fasta/nr.09
Posted date: Jul 29, 2013 5:13 PM
Number of letters in database: 999,999,159
Number of sequences in database: 2,912,643
Database: /usr2/db/fasta/nr.10
Posted date: Jul 29, 2013 5:15 PM
Number of letters in database: 788,892,548
Number of sequences in database: 2,364,762
Lambda K H
0.321 0.135 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,322,696,292
Number of Sequences: 31244244
Number of extensions: 367489301
Number of successful extensions: 921244
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 10949
Number of HSP's successfully gapped in prelim test: 632
Number of HSP's that attempted gapping in prelim test: 892461
Number of HSP's gapped (non-prelim): 26486
length of query: 455
length of database: 10,788,889,170
effective HSP length: 148
effective length of query: 307
effective length of database: 10,459,708,354
effective search space: 3211130464678
effective search space used: 3211130464678
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 79 (35.0 bits)