Your job contains 1 sequence.
>psy6094
MKSPHSPKGLTHSVTSWETRQKLLNDPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQ
MRDAVLDMVRNNQITVISGETGSGPPLHLDFITLKRSETQQYPNDVLNMLKDPELEGVNN
DVIFSLLQHICTTQRPGAILVYCTYTFMGVSPMKVFFCKNVLQRLMKGVGANSPKRWVKL
LRSMLVVPILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPE
GVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR
AGRTLKRSETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTI
NSLHRSMCQSSFFNSCLLYEFAMVDNKPKEIITVRDCLSFECKPSTAKIIKELRARLDML
LAHKLSHPGTTAWGDPNEGNILHCCSGFSRMVMVE
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy6094
(455 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
RGD|1308767 - symbol:Dhx36 "DEAH (Asp-Glu-Ala-His) box po... 397 4.5e-58 4
MGI|MGI:1919412 - symbol:Dhx36 "DEAH (Asp-Glu-Ala-His) bo... 394 5.9e-58 4
UNIPROTKB|F6V8H1 - symbol:DHX36 "Uncharacterized protein"... 397 7.0e-58 4
UNIPROTKB|Q9H2U1 - symbol:DHX36 "Probable ATP-dependent R... 394 1.3e-57 4
UNIPROTKB|Q05B79 - symbol:DHX36 "Uncharacterized protein"... 392 2.8e-57 4
UNIPROTKB|E1C550 - symbol:DHX36 "Uncharacterized protein"... 388 3.0e-57 4
ZFIN|ZDB-GENE-050419-20 - symbol:si:dkey-119o24.1 "si:dke... 368 4.5e-54 4
UNIPROTKB|E7EWK3 - symbol:DHX36 "Probable ATP-dependent R... 394 8.0e-51 3
TAIR|locus:2039280 - symbol:AT2G35920 species:3702 "Arabi... 366 6.9e-45 3
TAIR|locus:2052841 - symbol:HVT1 "helicase in vascular ti... 363 9.5e-44 4
UNIPROTKB|F5GZS0 - symbol:DHX36 "Probable ATP-dependent R... 305 9.8e-42 4
UNIPROTKB|E2QTL7 - symbol:DHX36 "Uncharacterized protein"... 303 1.0e-41 4
TAIR|locus:2009200 - symbol:NIH "nuclear DEIH-boxhelicase... 334 4.8e-40 3
TAIR|locus:2008144 - symbol:AT1G48650 species:3702 "Arabi... 327 2.3e-39 4
FB|FBgn0032883 - symbol:CG9323 species:7227 "Drosophila m... 299 1.5e-37 4
TAIR|locus:2038796 - symbol:AT2G01130 species:3702 "Arabi... 311 6.3e-36 4
ZFIN|ZDB-GENE-030131-4078 - symbol:dhx57 "DEAH (Asp-Glu-A... 280 3.6e-35 4
TAIR|locus:504954904 - symbol:ABO6 "ABA overly sensitive ... 292 4.3e-33 3
UNIPROTKB|E1C9G0 - symbol:DHX57 "Uncharacterized protein"... 280 1.2e-32 3
UNIPROTKB|Q6P158 - symbol:DHX57 "Putative ATP-dependent R... 287 2.2e-31 3
FB|FBgn0002774 - symbol:mle "maleless" species:7227 "Dros... 293 1.2e-30 4
RGD|1308548 - symbol:Dhx9 "DEAH (Asp-Glu-Ala-His) box pol... 305 2.3e-30 4
FB|FBgn0030246 - symbol:CG1582 species:7227 "Drosophila m... 302 2.4e-30 3
UNIPROTKB|H7BXY3 - symbol:DHX30 "Putative ATP-dependent R... 315 3.0e-30 3
UNIPROTKB|F1MNU7 - symbol:YTHDC2 "Uncharacterized protein... 293 3.2e-30 4
UNIPROTKB|Q7L2E3 - symbol:DHX30 "Putative ATP-dependent R... 315 3.4e-30 3
UNIPROTKB|G5E5N3 - symbol:DHX9 "ATP-dependent RNA helicas... 299 4.0e-30 4
UNIPROTKB|Q28141 - symbol:DHX9 "ATP-dependent RNA helicas... 299 4.0e-30 4
UNIPROTKB|E2QX71 - symbol:DHX57 "Uncharacterized protein"... 283 6.4e-30 3
UNIPROTKB|F1N1A2 - symbol:DHX57 "Uncharacterized protein"... 286 8.6e-30 3
MGI|MGI:2145374 - symbol:Dhx29 "DEAH (Asp-Glu-Ala-His) bo... 274 9.9e-30 3
UNIPROTKB|E1B9N7 - symbol:DHX29 "Uncharacterized protein"... 274 1.3e-29 3
UNIPROTKB|Q7Z478 - symbol:DHX29 "ATP-dependent RNA helica... 273 1.3e-29 3
RGD|1308888 - symbol:Dhx30 "DEAH (Asp-Glu-Ala-His) box po... 313 1.7e-29 3
UNIPROTKB|Q5BJS0 - symbol:Dhx30 "Putative ATP-dependent R... 313 1.7e-29 3
TAIR|locus:2196255 - symbol:AT1G58050 species:3702 "Arabi... 294 1.9e-29 4
UNIPROTKB|D4A1V3 - symbol:Dhx30 "Putative ATP-dependent R... 313 1.9e-29 3
UNIPROTKB|Q5R607 - symbol:DHX30 "Putative ATP-dependent R... 310 2.0e-29 3
UNIPROTKB|F1SLN0 - symbol:DHX29 "Uncharacterized protein"... 274 2.4e-29 4
UNIPROTKB|I3LG95 - symbol:DHX29 "Uncharacterized protein"... 274 2.4e-29 4
UNIPROTKB|I3LQ47 - symbol:DHX29 "Uncharacterized protein"... 274 2.4e-29 4
UNIPROTKB|F1N0J0 - symbol:DHX30 "Putative ATP-dependent R... 314 2.8e-29 3
UNIPROTKB|Q2NKY8 - symbol:DHX30 "Putative ATP-dependent R... 314 2.8e-29 3
UNIPROTKB|Q5R874 - symbol:DHX9 "ATP-dependent RNA helicas... 296 3.4e-29 4
UNIPROTKB|Q08211 - symbol:DHX9 "ATP-dependent RNA helicas... 296 3.4e-29 4
UNIPROTKB|I3LHZ6 - symbol:DHX9 "Uncharacterized protein" ... 294 3.4e-29 4
MGI|MGI:2448561 - symbol:Ythdc2 "YTH domain containing 2"... 293 3.6e-29 4
UNIPROTKB|F1SLI4 - symbol:DHX30 "Uncharacterized protein"... 315 4.1e-29 3
UNIPROTKB|J9P264 - symbol:DHX30 "Uncharacterized protein"... 314 4.5e-29 3
MGI|MGI:1920081 - symbol:Dhx30 "DEAH (Asp-Glu-Ala-His) bo... 313 4.5e-29 2
UNIPROTKB|E2RL62 - symbol:DHX30 "Uncharacterized protein"... 314 4.5e-29 3
MGI|MGI:2147067 - symbol:Dhx57 "DEAH (Asp-Glu-Ala-Asp/His... 281 6.3e-29 3
UNIPROTKB|F1M8G5 - symbol:Dhx57 "Protein Dhx57" species:1... 281 6.9e-29 4
UNIPROTKB|E2RID8 - symbol:DHX29 "Uncharacterized protein"... 271 7.8e-29 3
UNIPROTKB|J9P6V4 - symbol:DHX29 "Uncharacterized protein"... 271 7.9e-29 3
UNIPROTKB|F1LSC4 - symbol:Dhx57 "Protein Dhx57" species:1... 281 8.6e-29 4
UNIPROTKB|J9P3P6 - symbol:DHX30 "Uncharacterized protein"... 314 8.9e-29 2
UNIPROTKB|F1NS70 - symbol:YTHDC2 "Uncharacterized protein... 300 9.5e-29 3
RGD|2318361 - symbol:Dhx29 "DEAH (Asp-Glu-Ala-His) box po... 274 1.4e-28 3
UNIPROTKB|E2RNT3 - symbol:DHX9 "Uncharacterized protein" ... 295 1.7e-28 4
UNIPROTKB|I3LCY3 - symbol:DHX36 "Uncharacterized protein"... 299 1.7e-28 2
MGI|MGI:108177 - symbol:Dhx9 "DEAH (Asp-Glu-Ala-His) box ... 305 2.2e-28 3
UNIPROTKB|G4MZR9 - symbol:MGG_07059 "Pre-mRNA-splicing fa... 263 2.6e-28 3
UNIPROTKB|Q9H6S0 - symbol:YTHDC2 "Probable ATP-dependent ... 288 5.7e-28 4
UNIPROTKB|E2QZR7 - symbol:YTHDC2 "Uncharacterized protein... 294 6.9e-28 4
UNIPROTKB|J9PAM3 - symbol:YTHDC2 "Uncharacterized protein... 294 1.2e-27 3
UNIPROTKB|F1P1F4 - symbol:DHX30 "Putative ATP-dependent R... 312 1.6e-27 2
UNIPROTKB|Q5ZI74 - symbol:DHX30 "Putative ATP-dependent R... 312 1.6e-27 2
UNIPROTKB|E1C388 - symbol:DHX29 "Uncharacterized protein"... 257 3.3e-27 3
UNIPROTKB|H7C5F5 - symbol:DHX36 "Probable ATP-dependent R... 306 3.3e-27 1
CGD|CAL0005664 - symbol:orf19.6818 species:5476 "Candida ... 270 7.8e-27 3
UNIPROTKB|Q5ADM3 - symbol:CaO19.14110 "Putative uncharact... 270 7.8e-27 3
TAIR|locus:2196265 - symbol:AT1G58060 species:3702 "Arabi... 272 8.9e-27 4
UNIPROTKB|D6RA70 - symbol:YTHDC2 "Probable ATP-dependent ... 273 8.3e-26 3
UNIPROTKB|F1RLG0 - symbol:YTHDC2 "Uncharacterized protein... 288 1.2e-25 3
SGD|S000004411 - symbol:YLR419W "Putative helicase with l... 253 1.3e-25 3
DICTYBASE|DDB_G0275313 - symbol:dhx9 "ATP-dependent RNA h... 269 1.5e-25 3
UNIPROTKB|I3LRK0 - symbol:I3LRK0 "Uncharacterized protein... 285 1.8e-25 2
POMBASE|SPCC895.09c - symbol:ucp12 "ATP-dependent RNA hel... 259 2.5e-25 2
UNIPROTKB|G4MR96 - symbol:MGG_04709 "Uncharacterized prot... 257 2.7e-25 3
ZFIN|ZDB-GENE-070912-171 - symbol:dhx9 "DEAH (Asp-Glu-Ala... 276 3.5e-25 4
UNIPROTKB|Q68FK8 - symbol:dhx9 "ATP-dependent RNA helicas... 280 4.1e-25 4
UNIPROTKB|H7C109 - symbol:DHX57 "Putative ATP-dependent R... 287 1.0e-24 2
ZFIN|ZDB-GENE-061207-30 - symbol:dhx34 "DEAH (Asp-Glu-Ala... 262 1.9e-23 2
WB|WBGene00004355 - symbol:rha-1 species:6239 "Caenorhabd... 267 2.4e-23 3
FB|FBgn0030833 - symbol:CG8915 species:7227 "Drosophila m... 244 8.4e-23 2
WB|WBGene00009922 - symbol:F52B5.3 species:6239 "Caenorha... 273 1.3e-22 2
ZFIN|ZDB-GENE-040426-1144 - symbol:dhx38 "DEAH (Asp-Glu-A... 249 1.5e-22 2
UNIPROTKB|F1S3A8 - symbol:DHX38 "Uncharacterized protein"... 241 2.9e-22 2
CGD|CAL0002969 - symbol:orf19.107 species:5476 "Candida a... 218 4.8e-22 3
WB|WBGene00003392 - symbol:mog-4 species:6239 "Caenorhabd... 230 5.4e-22 2
UNIPROTKB|O45244 - symbol:mog-4 "Probable pre-mRNA-splici... 230 5.4e-22 2
GENEDB_PFALCIPARUM|PF10_0294 - symbol:PF10_0294 "RNA heli... 255 5.8e-22 2
UNIPROTKB|Q8IJA4 - symbol:PF10_0294 "RNA helicase, putati... 255 5.8e-22 2
UNIPROTKB|F1RLY9 - symbol:DHX34 "Uncharacterized protein"... 258 6.2e-22 2
TAIR|locus:2062492 - symbol:MEE29 "maternal effect embryo... 239 1.0e-21 2
UNIPROTKB|E2RC56 - symbol:DHX38 "Uncharacterized protein"... 241 1.2e-21 2
UNIPROTKB|Q17R09 - symbol:DHX38 "Pre-mRNA-splicing factor... 241 1.2e-21 2
POMBASE|SPBC15C4.05 - symbol:SPBC15C4.05 "ATP-dependent R... 244 1.9e-21 3
UNIPROTKB|Q92620 - symbol:DHX38 "Pre-mRNA-splicing factor... 241 3.1e-21 2
WARNING: Descriptions of 185 database sequences were not reported due to the
limiting value of parameter V = 100.
>RGD|1308767 [details] [associations]
symbol:Dhx36 "DEAH (Asp-Glu-Ala-His) box polypeptide 36"
species:10116 "Rattus norvegicus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA;ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009615 "response to virus" evidence=IEA;ISO]
[GO:0043330 "response to exogenous dsRNA" evidence=IEA;ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1308767 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009615
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
GeneTree:ENSGT00550000074257 CTD:170506 KO:K14442 OMA:RIRNRSY
OrthoDB:EOG4K6G3J EMBL:CH474003 IPI:IPI00367998
RefSeq:NP_001101148.1 UniGene:Rn.2744 Ensembl:ENSRNOT00000019824
GeneID:310461 KEGG:rno:310461 UCSC:RGD:1308767 NextBio:662035
Uniprot:D4A2Z8
Length = 1000
Score = 397 (144.8 bits), Expect = 4.5e-58, Sum P(4) = 4.5e-58
Identities = 84/169 (49%), Positives = 111/169 (65%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I++LH + F S RF IIPLHS++PTV+Q +F P GVRKIV+A
Sbjct: 483 ILVFLPGWDNISTLHDLLMSQVMFKSDRFLIIPLHSLMPTVNQTQVFKKTPPGVRKIVIA 542
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITIDD+VYV+D GK K ++FD ++NI+T+ EW+S ANAKQR+GRAGR
Sbjct: 543 TNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGH 602
Query: 309 ETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTT---QRPGAILVFL 354
Y ++L D +L +++ + L+ +C R G I FL
Sbjct: 603 CYHLYNGLRASLLDDYQLP----EILRTPLEELCLQIKILRLGGIAYFL 647
Score = 132 (51.5 bits), Expect = 4.5e-58, Sum P(4) = 4.5e-58
Identities = 28/62 (45%), Positives = 41/62 (66%)
Query: 25 NDPVL--DAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETG 82
N+P L D +++ +K RY EM RKKLPSY M+ +++++ N+Q+TVISGETG
Sbjct: 166 NEPNLGLDQQLLEDLQKKKTDPRYIEMQRFRKKLPSYGMQKELVNLINNHQVTVISGETG 225
Query: 83 SG 84
G
Sbjct: 226 CG 227
Score = 116 (45.9 bits), Expect = 4.1e-17, Sum P(3) = 4.1e-17
Identities = 25/60 (41%), Positives = 39/60 (65%)
Query: 316 DVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
DVL M+ D +++ +N +I +L+++I + GAILVFLPGWD I++LH + F S
Sbjct: 452 DVLEMMDDDKVD-LN--LIAALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKS 508
Score = 92 (37.4 bits), Expect = 4.5e-58, Sum P(4) = 4.5e-58
Identities = 21/63 (33%), Positives = 34/63 (53%)
Query: 376 CLLY---EFAMVDNKPKEIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHPGTTA 432
CLL+ + ++ +K +EII V + + F+ A ++K LR LD+LL K+ P
Sbjct: 901 CLLFFGGDISIQKDKDQEIIAVDEWIVFQSPERIAHLVKGLRKELDILLQEKIECPHPVD 960
Query: 433 WGD 435
W D
Sbjct: 961 WND 963
Score = 56 (24.8 bits), Expect = 4.5e-58, Sum P(4) = 4.5e-58
Identities = 14/38 (36%), Positives = 26/38 (68%)
Query: 105 DVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVY 142
DVL M+ D +++ +N +I +L+++I + GAILV+
Sbjct: 452 DVLEMMDDDKVD-LN--LIAALIRYIVLEEEDGAILVF 486
>MGI|MGI:1919412 [details] [associations]
symbol:Dhx36 "DEAH (Asp-Glu-Ala-His) box polypeptide 36"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IDA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009615 "response to virus"
evidence=IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0043330 "response to exogenous dsRNA" evidence=IMP]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
MGI:MGI:1919412 GO:GO:0005524 GO:GO:0005634 GO:GO:0009615
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GO:GO:0043330 EMBL:CH466530 HOGENOM:HOG000247063
GeneTree:ENSGT00550000074257 CTD:170506 HOVERGEN:HBG081438
KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J EMBL:AF448804 EMBL:AC114424
EMBL:AK129373 EMBL:AK013031 IPI:IPI00351266 RefSeq:NP_082412.2
UniGene:Mm.224233 ProteinModelPortal:Q8VHK9 DIP:DIP-48576N
STRING:Q8VHK9 PhosphoSite:Q8VHK9 PaxDb:Q8VHK9 PRIDE:Q8VHK9
Ensembl:ENSMUST00000029336 GeneID:72162 KEGG:mmu:72162
UCSC:uc008pjn.2 InParanoid:Q8VHK9 ChiTaRS:DHX36 NextBio:335597
CleanEx:MM_DHX36 Genevestigator:Q8VHK9
GermOnline:ENSMUSG00000027770 Uniprot:Q8VHK9
Length = 1001
Score = 394 (143.8 bits), Expect = 5.9e-58, Sum P(4) = 5.9e-58
Identities = 83/169 (49%), Positives = 111/169 (65%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I++LH + F S +F IIPLHS++PTV+Q +F P GVRKIV+A
Sbjct: 484 ILVFLPGWDNISTLHDLLMSQVMFKSDKFLIIPLHSLMPTVNQTQVFKKTPPGVRKIVIA 543
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITIDD+VYV+D GK K ++FD ++NI+T+ EW+S ANAKQR+GRAGR
Sbjct: 544 TNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGH 603
Query: 309 ETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTT---QRPGAILVFL 354
Y ++L D +L +++ + L+ +C R G I FL
Sbjct: 604 CYHLYNGLRASLLDDYQLP----EILRTPLEELCLQIKILRLGGIAYFL 648
Score = 135 (52.6 bits), Expect = 5.9e-58, Sum P(4) = 5.9e-58
Identities = 29/62 (46%), Positives = 41/62 (66%)
Query: 25 NDP--VLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETG 82
N+P LD +++ RK RY EM RKKLPSY M+ +++++ N+Q+TVISGETG
Sbjct: 167 NEPNLSLDQHLLEDLQRKKTDPRYIEMQRFRKKLPSYGMQKELVNLINNHQVTVISGETG 226
Query: 83 SG 84
G
Sbjct: 227 CG 228
Score = 116 (45.9 bits), Expect = 2.4e-17, Sum P(3) = 2.4e-17
Identities = 25/60 (41%), Positives = 39/60 (65%)
Query: 316 DVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
DVL M+ D +++ +N +I +L+++I + GAILVFLPGWD I++LH + F S
Sbjct: 453 DVLQMMDDDKVD-LN--LIAALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKS 509
Score = 91 (37.1 bits), Expect = 5.9e-58, Sum P(4) = 5.9e-58
Identities = 21/63 (33%), Positives = 33/63 (52%)
Query: 376 CLLY---EFAMVDNKPKEIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHPGTTA 432
CLL+ + ++ +K +EII V + + F+ A ++K LR LD LL K+ P
Sbjct: 902 CLLFFGGDISIQKDKDQEIIAVDEWIVFQSPERIAHLVKGLRKELDSLLQEKIESPHPVD 961
Query: 433 WGD 435
W D
Sbjct: 962 WDD 964
Score = 56 (24.8 bits), Expect = 5.9e-58, Sum P(4) = 5.9e-58
Identities = 14/38 (36%), Positives = 26/38 (68%)
Query: 105 DVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVY 142
DVL M+ D +++ +N +I +L+++I + GAILV+
Sbjct: 453 DVLQMMDDDKVD-LN--LIAALIRYIVLEEEDGAILVF 487
>UNIPROTKB|F6V8H1 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 OMA:RIRNRSY Ensembl:ENSCAFT00000013769
EMBL:AAEX03013695 Uniprot:F6V8H1
Length = 1122
Score = 397 (144.8 bits), Expect = 7.0e-58, Sum P(4) = 7.0e-58
Identities = 84/169 (49%), Positives = 111/169 (65%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I++LH + F S RF IIPLHS++PTV+Q +F P GVRKIV+A
Sbjct: 605 ILVFLPGWDNISTLHDLLMSQVMFKSDRFLIIPLHSLMPTVNQTQVFKKTPPGVRKIVIA 664
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITIDD+VYV+D GK K ++FD ++NI+T+ EW+S ANAKQR+GRAGR
Sbjct: 665 TNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGH 724
Query: 309 ETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTT---QRPGAILVFL 354
Y ++L D +L +++ + L+ +C R G I FL
Sbjct: 725 CYHLYNGLRASLLDDYQLP----EILRTPLEELCLQIKILRLGGIAYFL 769
Score = 133 (51.9 bits), Expect = 7.0e-58, Sum P(4) = 7.0e-58
Identities = 27/59 (45%), Positives = 39/59 (66%)
Query: 26 DPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
D LD +++ +K RY EM R+KLPSY M+ +++M+ N+Q+TVISGETG G
Sbjct: 291 DVALDQQLLEDLRKKKSDLRYIEMQHFREKLPSYGMQKELVNMIDNHQVTVISGETGCG 349
Score = 120 (47.3 bits), Expect = 5.9e-17, Sum P(3) = 5.9e-17
Identities = 25/60 (41%), Positives = 39/60 (65%)
Query: 316 DVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
DV+ M+ D +++ +N +I +L++HI + GAILVFLPGWD I++LH + F S
Sbjct: 574 DVMEMIDDDKVD-LN--LIAALIRHIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKS 630
Score = 87 (35.7 bits), Expect = 7.0e-58, Sum P(4) = 7.0e-58
Identities = 20/63 (31%), Positives = 32/63 (50%)
Query: 376 CLLY---EFAMVDNKPKEIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHPGTTA 432
CLL+ + ++ + +E I V + + F+ A ++KELR LD LL K+ P
Sbjct: 1023 CLLFFGGDISIQKDNDQETIAVDEWIVFQSPARIAHLVKELRKELDTLLQEKIESPHPVD 1082
Query: 433 WGD 435
W D
Sbjct: 1083 WKD 1085
Score = 62 (26.9 bits), Expect = 7.0e-58, Sum P(4) = 7.0e-58
Identities = 16/53 (30%), Positives = 30/53 (56%)
Query: 90 DFITLKRSETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVY 142
D++ R DV+ M+ D +++ +N +I +L++HI + GAILV+
Sbjct: 559 DYVRELRKRYSASTVDVMEMIDDDKVD-LN--LIAALIRHIVLEEEDGAILVF 608
>UNIPROTKB|Q9H2U1 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:CH471052 GO:GO:0009615 GO:GO:0003725 EMBL:AC018452
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
HOGENOM:HOG000247063 EMBL:AF217190 EMBL:AJ577133 EMBL:AJ577134
EMBL:AK314435 EMBL:AC134026 EMBL:BC036035 EMBL:AB040921
IPI:IPI00027415 IPI:IPI00217760 IPI:IPI00784170 PIR:D56236
RefSeq:NP_001107869.1 RefSeq:NP_065916.2 UniGene:Hs.446270
ProteinModelPortal:Q9H2U1 SMR:Q9H2U1 IntAct:Q9H2U1
MINT:MINT-3066797 STRING:Q9H2U1 PhosphoSite:Q9H2U1 DMDM:74762733
PaxDb:Q9H2U1 PRIDE:Q9H2U1 DNASU:170506 Ensembl:ENST00000308361
Ensembl:ENST00000329463 Ensembl:ENST00000496811 GeneID:170506
KEGG:hsa:170506 UCSC:uc003ezy.4 UCSC:uc003ezz.4 UCSC:uc010hvq.3
CTD:170506 GeneCards:GC03M153990 HGNC:HGNC:14410 HPA:HPA035399
MIM:612767 neXtProt:NX_Q9H2U1 PharmGKB:PA27223 HOVERGEN:HBG081438
InParanoid:Q9H2U1 KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J
PhylomeDB:Q9H2U1 GenomeRNAi:170506 NextBio:88959
ArrayExpress:Q9H2U1 Bgee:Q9H2U1 CleanEx:HS_DHX36
Genevestigator:Q9H2U1 GermOnline:ENSG00000174953 Uniprot:Q9H2U1
Length = 1008
Score = 394 (143.8 bits), Expect = 1.3e-57, Sum P(4) = 1.3e-57
Identities = 83/169 (49%), Positives = 111/169 (65%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I++LH + F S +F IIPLHS++PTV+Q +F P GVRKIV+A
Sbjct: 491 ILVFLPGWDNISTLHDLLMSQVMFKSDKFLIIPLHSLMPTVNQTQVFKRTPPGVRKIVIA 550
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITIDD+VYV+D GK K ++FD ++NI+T+ EW+S ANAKQR+GRAGR
Sbjct: 551 TNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGH 610
Query: 309 ETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTT---QRPGAILVFL 354
Y ++L D +L +++ + L+ +C R G I FL
Sbjct: 611 CYHLYNGLRASLLDDYQLP----EILRTPLEELCLQIKILRLGGIAYFL 655
Score = 130 (50.8 bits), Expect = 1.3e-57, Sum P(4) = 1.3e-57
Identities = 26/59 (44%), Positives = 39/59 (66%)
Query: 26 DPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
D LD +++ +K RY EM R+KLPSY M+ +++++ N+Q+TVISGETG G
Sbjct: 177 DGTLDQKLLEDLQKKKNDLRYIEMQHFREKLPSYGMQKELVNLIDNHQVTVISGETGCG 235
Score = 117 (46.2 bits), Expect = 6.9e-17, Sum P(3) = 6.9e-17
Identities = 24/60 (40%), Positives = 40/60 (66%)
Query: 316 DVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
DV+ M++D +++ +N +I +L+++I + GAILVFLPGWD I++LH + F S
Sbjct: 460 DVIEMMEDDKVD-LN--LIVALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKS 516
Score = 91 (37.1 bits), Expect = 1.3e-57, Sum P(4) = 1.3e-57
Identities = 20/63 (31%), Positives = 33/63 (52%)
Query: 376 CLLY---EFAMVDNKPKEIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHPGTTA 432
CLL+ + ++ + +E I V + + F+ A ++KELR LD+LL K+ P
Sbjct: 909 CLLFFGGDISIQKDNDQETIAVDEWIVFQSPARIAHLVKELRKELDILLQEKIESPHPVD 968
Query: 433 WGD 435
W D
Sbjct: 969 WND 971
Score = 58 (25.5 bits), Expect = 1.3e-57, Sum P(4) = 1.3e-57
Identities = 15/53 (28%), Positives = 31/53 (58%)
Query: 90 DFITLKRSETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVY 142
D++ R DV+ M++D +++ +N +I +L+++I + GAILV+
Sbjct: 445 DYVRELRRRYSASTVDVIEMMEDDKVD-LN--LIVALIRYIVLEEEDGAILVF 494
>UNIPROTKB|Q05B79 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043330 "response to exogenous dsRNA" evidence=IEA]
[GO:0009615 "response to virus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0009615 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0043330 HOGENOM:HOG000247063
GeneTree:ENSGT00550000074257 CTD:170506 HOVERGEN:HBG081438
KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J EMBL:DAAA02002574
EMBL:DAAA02002573 EMBL:BC122652 IPI:IPI00686397
RefSeq:NP_001073720.1 UniGene:Bt.103344 Ensembl:ENSBTAT00000008082
GeneID:509583 KEGG:bta:509583 InParanoid:Q05B79 NextBio:20869030
Uniprot:Q05B79
Length = 1010
Score = 392 (143.0 bits), Expect = 2.8e-57, Sum P(4) = 2.8e-57
Identities = 83/169 (49%), Positives = 112/169 (66%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I++LH + F S +F IIPLHS++PTV+Q +F P GVRKIV+A
Sbjct: 493 ILVFLPGWDNISTLHDLLMSQVMFKSDKFIIIPLHSLMPTVNQTQVFKRTPPGVRKIVIA 552
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITIDD+VYV+D GK K ++FD ++NI+T+ EW+S ANAKQR+GRAGR
Sbjct: 553 TNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGH 612
Query: 309 ETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTT---QRPGAILVFL 354
Y + ++L D +L +++ + L+ +C R G I FL
Sbjct: 613 CYHLYNSLRASLLDDYQLP----EILRTPLEELCLQIKILRLGGIAHFL 657
Score = 133 (51.9 bits), Expect = 2.8e-57, Sum P(4) = 2.8e-57
Identities = 27/59 (45%), Positives = 39/59 (66%)
Query: 26 DPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
D LD +++ +K RY EM R+KLPSY M+ +++M+ N+Q+TVISGETG G
Sbjct: 179 DATLDQQLLEDLQKKKTDLRYIEMQRFREKLPSYGMQKELVNMIDNHQVTVISGETGCG 237
Score = 116 (45.9 bits), Expect = 6.6e-17, Sum P(3) = 6.6e-17
Identities = 25/60 (41%), Positives = 38/60 (63%)
Query: 316 DVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
DV+ M+ D E V+ ++I +L+++I + GAILVFLPGWD I++LH + F S
Sbjct: 462 DVVEMMDD---EKVDLNLIAALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKS 518
Score = 89 (36.4 bits), Expect = 2.8e-57, Sum P(4) = 2.8e-57
Identities = 20/63 (31%), Positives = 33/63 (52%)
Query: 376 CLLY---EFAMVDNKPKEIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHPGTTA 432
CLL+ + ++ + +E I V + + F+ A ++KELR LD+LL K+ P
Sbjct: 911 CLLFFGGDISIQKDNDQETIAVDEWIIFQSPARIAHLVKELRKELDILLQEKIESPHPVD 970
Query: 433 WGD 435
W D
Sbjct: 971 WKD 973
Score = 56 (24.8 bits), Expect = 2.8e-57, Sum P(4) = 2.8e-57
Identities = 14/38 (36%), Positives = 25/38 (65%)
Query: 105 DVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVY 142
DV+ M+ D E V+ ++I +L+++I + GAILV+
Sbjct: 462 DVVEMMDD---EKVDLNLIAALIRYIVLEEEDGAILVF 496
>UNIPROTKB|E1C550 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003725 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0043330 GeneTree:ENSGT00550000074257
OMA:GRIAYND EMBL:AADN02021100 IPI:IPI00601151
Ensembl:ENSGALT00000016841 Uniprot:E1C550
Length = 985
Score = 388 (141.6 bits), Expect = 3.0e-57, Sum P(4) = 3.0e-57
Identities = 78/154 (50%), Positives = 106/154 (68%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I++LH + F S RF IIPLHS++PTV+Q +F P GVRKIV+A
Sbjct: 472 ILVFLPGWDNISTLHDLLMSQVMFKSDRFIIIPLHSLMPTVNQTQVFKKTPPGVRKIVIA 531
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITIDD+V+V+D GK K ++FD ++NI+T+ EW+S ANAKQR+GRAGR
Sbjct: 532 TNIAETSITIDDVVFVIDGGKIKETHFDTQNNISTMAAEWVSKANAKQRKGRAGRVQPGH 591
Query: 309 ETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC 342
Y ++L D +L +++ + L+ +C
Sbjct: 592 CYHLYNGLRASLLDDYQLP----EILRTPLEELC 621
Score = 132 (51.5 bits), Expect = 3.0e-57, Sum P(4) = 3.0e-57
Identities = 28/61 (45%), Positives = 40/61 (65%)
Query: 26 DPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDA--VLDMVRNNQITVISGETGS 83
D LD K+++ +K RY EM R+KLPSY MR +++++ NN++TVISGETG
Sbjct: 156 DADLDEQLKEDLRKKKSDPRYIEMQRFREKLPSYGMRQKQELVNLINNNRVTVISGETGC 215
Query: 84 G 84
G
Sbjct: 216 G 216
Score = 123 (48.4 bits), Expect = 3.1e-17, Sum P(3) = 3.1e-17
Identities = 26/60 (43%), Positives = 37/60 (61%)
Query: 316 DVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
D L M+ D + V+ D+I +L++HI + GAILVFLPGWD I++LH + F S
Sbjct: 441 DALEMMDDDK---VDLDLIAALIRHIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKS 497
Score = 86 (35.3 bits), Expect = 3.0e-57, Sum P(4) = 3.0e-57
Identities = 19/63 (30%), Positives = 33/63 (52%)
Query: 376 CLLY---EFAMVDNKPKEIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHPGTTA 432
CLL+ + ++ +K ++ I V + + F+ A ++K LR LD LL K+ +P
Sbjct: 890 CLLFFGGDISIQKDKDQDTIAVDEWIVFQSPARIAHLVKNLRQELDDLLQEKIENPHPVD 949
Query: 433 WGD 435
W D
Sbjct: 950 WND 952
Score = 63 (27.2 bits), Expect = 3.0e-57, Sum P(4) = 3.0e-57
Identities = 15/38 (39%), Positives = 24/38 (63%)
Query: 105 DVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVY 142
D L M+ D + V+ D+I +L++HI + GAILV+
Sbjct: 441 DALEMMDDDK---VDLDLIAALIRHIVLEEEDGAILVF 475
>ZFIN|ZDB-GENE-050419-20 [details] [associations]
symbol:si:dkey-119o24.1 "si:dkey-119o24.1"
species:7955 "Danio rerio" [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-050419-20 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000247063 GeneTree:ENSGT00550000074257
HOVERGEN:HBG081438 KO:K14442 OrthoDB:EOG4K6G3J OMA:GRIAYND
EMBL:BX908763 EMBL:BX927166 IPI:IPI00633899 RefSeq:NP_001122016.1
UniGene:Dr.130296 Ensembl:ENSDART00000109467 GeneID:569072
KEGG:dre:569072 InParanoid:A3KQN8 NextBio:20889491 Uniprot:A3KQN8
Length = 1037
Score = 368 (134.6 bits), Expect = 4.5e-54, Sum P(4) = 4.5e-54
Identities = 73/124 (58%), Positives = 93/124 (75%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQ--IIPLHSMLPTVSQKSI-------FNTPP 239
ILVFLPGWD I++L+ + F S R++ IIPLHS++PTVSQ + F PP
Sbjct: 505 ILVFLPGWDNISTLNDLLMSDQMFKSGRYRFIIIPLHSLMPTVSQTQVISLFPQVFKKPP 564
Query: 240 EGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRG 299
GVRKIV+ATNIAETSITIDD+VYV+D GK K ++FD ++NI T+ EW+S+ANAKQR+G
Sbjct: 565 PGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNIRTMTAEWVSIANAKQRKG 624
Query: 300 RAGR 303
RAGR
Sbjct: 625 RAGR 628
Score = 142 (55.0 bits), Expect = 4.5e-54, Sum P(4) = 4.5e-54
Identities = 29/64 (45%), Positives = 42/64 (65%)
Query: 21 QKLLNDPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGE 80
Q ++ P LD KK+ +K + Y EML+ RKKLPSY MR+ ++ ++ N++ VISGE
Sbjct: 185 QDVVQIPFLDEELKKDQQKKEDNAAYIEMLKFRKKLPSYGMREELVRLISANRVLVISGE 244
Query: 81 TGSG 84
TG G
Sbjct: 245 TGCG 248
Score = 118 (46.6 bits), Expect = 2.5e-16, Sum P(3) = 2.5e-16
Identities = 28/82 (34%), Positives = 45/82 (54%)
Query: 303 RTLKRSETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINS 362
RTL R +VL M+ D + ++ ++ +L++HI + GAILVFLPGWD I++
Sbjct: 461 RTL-RDRFSDTTIEVLGMMDDDD--NIDLELTAALIRHIAVNENEGAILVFLPGWDNIST 517
Query: 363 LHRSMCQSSFFNSCLLYEFAMV 384
L+ + F S Y F ++
Sbjct: 518 LNDLLMSDQMFKSGR-YRFIII 538
Score = 72 (30.4 bits), Expect = 4.5e-54, Sum P(4) = 4.5e-54
Identities = 14/50 (28%), Positives = 27/50 (54%)
Query: 386 NKPKEIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHPGTTAWGD 435
++ ++ I V + + F+ A ++K+L+ LD+LL K+ P W D
Sbjct: 946 DQDQDTIAVDEWIVFQSPGRIAHLVKDLKKELDVLLEEKIKSPHPVDWKD 995
Score = 59 (25.8 bits), Expect = 4.5e-54, Sum P(4) = 4.5e-54
Identities = 12/38 (31%), Positives = 24/38 (63%)
Query: 105 DVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVY 142
+VL M+ D + ++ ++ +L++HI + GAILV+
Sbjct: 473 EVLGMMDDDD--NIDLELTAALIRHIAVNENEGAILVF 508
>UNIPROTKB|E7EWK3 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0009615 GO:GO:0003725
EMBL:AC018452 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
EMBL:AC134026 HGNC:HGNC:14410 IPI:IPI00945848
ProteinModelPortal:E7EWK3 SMR:E7EWK3 Ensembl:ENST00000481941
ArrayExpress:E7EWK3 Bgee:E7EWK3 Uniprot:E7EWK3
Length = 797
Score = 394 (143.8 bits), Expect = 8.0e-51, Sum P(3) = 8.0e-51
Identities = 83/169 (49%), Positives = 111/169 (65%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I++LH + F S +F IIPLHS++PTV+Q +F P GVRKIV+A
Sbjct: 405 ILVFLPGWDNISTLHDLLMSQVMFKSDKFLIIPLHSLMPTVNQTQVFKRTPPGVRKIVIA 464
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITIDD+VYV+D GK K ++FD ++NI+T+ EW+S ANAKQR+GRAGR
Sbjct: 465 TNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGH 524
Query: 309 ETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTT---QRPGAILVFL 354
Y ++L D +L +++ + L+ +C R G I FL
Sbjct: 525 CYHLYNGLRASLLDDYQLP----EILRTPLEELCLQIKILRLGGIAYFL 569
Score = 130 (50.8 bits), Expect = 8.0e-51, Sum P(3) = 8.0e-51
Identities = 26/59 (44%), Positives = 39/59 (66%)
Query: 26 DPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
D LD +++ +K RY EM R+KLPSY M+ +++++ N+Q+TVISGETG G
Sbjct: 91 DGTLDQKLLEDLQKKKNDLRYIEMQHFREKLPSYGMQKELVNLIDNHQVTVISGETGCG 149
Score = 117 (46.2 bits), Expect = 2.9e-12, Sum P(2) = 2.9e-12
Identities = 24/60 (40%), Positives = 40/60 (66%)
Query: 316 DVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
DV+ M++D +++ +N +I +L+++I + GAILVFLPGWD I++LH + F S
Sbjct: 374 DVIEMMEDDKVD-LN--LIVALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKS 430
Score = 58 (25.5 bits), Expect = 8.0e-51, Sum P(3) = 8.0e-51
Identities = 15/53 (28%), Positives = 31/53 (58%)
Query: 90 DFITLKRSETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVY 142
D++ R DV+ M++D +++ +N +I +L+++I + GAILV+
Sbjct: 359 DYVRELRRRYSASTVDVIEMMEDDKVD-LN--LIVALIRYIVLEEEDGAILVF 408
>TAIR|locus:2039280 [details] [associations]
symbol:AT2G35920 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006499
"N-terminal protein myristoylation" evidence=RCA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CP002685 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K14442 OMA:RIRNRSY IPI:IPI00520060
RefSeq:NP_850255.1 UniGene:At.27892 ProteinModelPortal:F4ILR7
SMR:F4ILR7 PRIDE:F4ILR7 EnsemblPlants:AT2G35920.1 GeneID:818165
KEGG:ath:AT2G35920 Uniprot:F4ILR7
Length = 995
Score = 366 (133.9 bits), Expect = 6.9e-45, Sum P(3) = 6.9e-45
Identities = 79/167 (47%), Positives = 107/167 (64%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFL GWD I+ L + ++F +SS+F ++PLH +PTV+Q+ IF+ PP RKIVL
Sbjct: 506 ILVFLTGWDEISKLLEKINMNNFLGDSSKFLVLPLHGSMPTVNQREIFDRPPPNKRKIVL 565
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKR 307
ATNIAE+SITIDD+VYVVDCGK K +++D + +A L P WIS A+A QRRGRAGR
Sbjct: 566 ATNIAESSITIDDVVYVVDCGKAKETSYDALNKVACLLPSWISKASAHQRRGRAGRVQAG 625
Query: 308 SETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFL 354
+ YP + + +L + + L HI + Q G+I FL
Sbjct: 626 VCYRLYPKVIYDAFPQYQLPEIIRTPLQELCLHIKSLQ-VGSIGSFL 671
Score = 106 (42.4 bits), Expect = 6.9e-45, Sum P(3) = 6.9e-45
Identities = 25/60 (41%), Positives = 38/60 (63%)
Query: 35 KEMIRKLQSRRYQEMLEA-RKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHL-DFI 92
KE KL++ + L+A R+KLP+++M++ L+ V NQ+ V+SGETG G L FI
Sbjct: 206 KERQEKLKATESVKALKAFREKLPAFKMKEEFLNSVSQNQVLVVSGETGCGKTTQLPQFI 265
Score = 97 (39.2 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 21/65 (32%), Positives = 36/65 (55%)
Query: 308 SETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSM 367
S + Y + N L+ ++ D++ + ++HIC + GAILVFL GWD I+ L +
Sbjct: 464 SHYKSYSSATRNSLEAWSGAQIDVDLVEATIEHICRLEGGGAILVFLTGWDEISKLLEKI 523
Query: 368 CQSSF 372
++F
Sbjct: 524 NMNNF 528
Score = 61 (26.5 bits), Expect = 6.9e-45, Sum P(3) = 6.9e-45
Identities = 14/48 (29%), Positives = 26/48 (54%)
Query: 97 SETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVYCT 144
S + Y + N L+ ++ D++ + ++HIC + GAILV+ T
Sbjct: 464 SHYKSYSSATRNSLEAWSGAQIDVDLVEATIEHICRLEGGGAILVFLT 511
>TAIR|locus:2052841 [details] [associations]
symbol:HVT1 "helicase in vascular tissue and tapetum"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA;ISS] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;ISS] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000226 "microtubule
cytoskeleton organization" evidence=RCA] [GO:0000911 "cytokinesis
by cell plate formation" evidence=RCA] InterPro:IPR001374
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF01424 Pfam:PF04408 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00393 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 EMBL:CP002685 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 IPI:IPI00521007
RefSeq:NP_850154.2 UniGene:At.19969 ProteinModelPortal:F4INY4
SMR:F4INY4 PRIDE:F4INY4 EnsemblPlants:AT2G30800.1 GeneID:817631
KEGG:ath:AT2G30800 OMA:PYNNVST Uniprot:F4INY4
Length = 1299
Score = 363 (132.8 bits), Expect = 9.5e-44, Sum P(4) = 9.5e-44
Identities = 67/116 (57%), Positives = 90/116 (77%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFLPGWD IN + + ++ FF +S++F II LHSM+P QK +FN PP G RKIVL
Sbjct: 554 ILVFLPGWDDINKTRQRLLENPFFADSAKFDIICLHSMVPAGEQKKVFNRPPPGCRKIVL 613
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
ATNIAE+++TIDD+VYV+D G+ K ++D +N++TL+ W+S ANAKQR+GRAGR
Sbjct: 614 ATNIAESAVTIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKANAKQRQGRAGR 669
Score = 107 (42.7 bits), Expect = 6.2e-07, Sum P(3) = 6.2e-07
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 327 EGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFF 373
E V+ +I L++ IC GAILVFLPGWD IN + + ++ FF
Sbjct: 531 EQVDVSLIQQLMRKICGDSEDGAILVFLPGWDDINKTRQRLLENPFF 577
Score = 94 (38.1 bits), Expect = 9.5e-44, Sum P(4) = 9.5e-44
Identities = 23/66 (34%), Positives = 35/66 (53%)
Query: 39 RKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG-----PPLHLDFIT 93
R + + +E+ + R KLP +DA+ V +NQ+ +ISGETG G P LD +
Sbjct: 170 RLKKDKALKEITKLRSKLPITSFKDAITSAVESNQVILISGETGCGKTTQVPQYLLDHMW 229
Query: 94 LKRSET 99
+ ET
Sbjct: 230 SSKRET 235
Score = 47 (21.6 bits), Expect = 9.5e-44, Sum P(4) = 9.5e-44
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 116 EGVNNDVIFSLLQHICTTQRPGAILVY 142
E V+ +I L++ IC GAILV+
Sbjct: 531 EQVDVSLIQQLMRKICGDSEDGAILVF 557
Score = 44 (20.5 bits), Expect = 9.5e-44, Sum P(4) = 9.5e-44
Identities = 10/53 (18%), Positives = 24/53 (45%)
Query: 366 SMCQSSFFNSCLLYEFAMVDNKPKEIITVRDCLSFECKPSTAKIIKELRARLD 418
S+C + ++ F N ++ C + PS K++ ++R++L+
Sbjct: 817 SLCGGDSDHLAVVAAFECWKNAKGRGLSAEFCSQYFVSPSAMKMLDQMRSQLE 869
>UNIPROTKB|F5GZS0 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0003676
EMBL:AC018452 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AC134026
HGNC:HGNC:14410 IPI:IPI00922725 ProteinModelPortal:F5GZS0
SMR:F5GZS0 PRIDE:F5GZS0 Ensembl:ENST00000544526 ArrayExpress:F5GZS0
Bgee:F5GZS0 Uniprot:F5GZS0
Length = 994
Score = 305 (112.4 bits), Expect = 9.8e-42, Sum P(4) = 9.8e-42
Identities = 75/169 (44%), Positives = 100/169 (59%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I++LH + F S T+SQ +F P GVRKIV+A
Sbjct: 491 ILVFLPGWDNISTLHDLLMSQVMFKSG------------TMSQ--VFKRTPPGVRKIVIA 536
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITIDD+VYV+D GK K ++FD ++NI+T+ EW+S ANAKQR+GRAGR
Sbjct: 537 TNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGH 596
Query: 309 ETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTT---QRPGAILVFL 354
Y ++L D +L +++ + L+ +C R G I FL
Sbjct: 597 CYHLYNGLRASLLDDYQLP----EILRTPLEELCLQIKILRLGGIAYFL 641
Score = 130 (50.8 bits), Expect = 9.8e-42, Sum P(4) = 9.8e-42
Identities = 26/59 (44%), Positives = 39/59 (66%)
Query: 26 DPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
D LD +++ +K RY EM R+KLPSY M+ +++++ N+Q+TVISGETG G
Sbjct: 177 DGTLDQKLLEDLQKKKNDLRYIEMQHFREKLPSYGMQKELVNLIDNHQVTVISGETGCG 235
Score = 117 (46.2 bits), Expect = 6.6e-17, Sum P(3) = 6.6e-17
Identities = 24/60 (40%), Positives = 40/60 (66%)
Query: 316 DVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
DV+ M++D +++ +N +I +L+++I + GAILVFLPGWD I++LH + F S
Sbjct: 460 DVIEMMEDDKVD-LN--LIVALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKS 516
Score = 91 (37.1 bits), Expect = 9.8e-42, Sum P(4) = 9.8e-42
Identities = 20/63 (31%), Positives = 33/63 (52%)
Query: 376 CLLY---EFAMVDNKPKEIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHPGTTA 432
CLL+ + ++ + +E I V + + F+ A ++KELR LD+LL K+ P
Sbjct: 895 CLLFFGGDISIQKDNDQETIAVDEWIVFQSPARIAHLVKELRKELDILLQEKIESPHPVD 954
Query: 433 WGD 435
W D
Sbjct: 955 WND 957
Score = 58 (25.5 bits), Expect = 9.8e-42, Sum P(4) = 9.8e-42
Identities = 15/53 (28%), Positives = 31/53 (58%)
Query: 90 DFITLKRSETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVY 142
D++ R DV+ M++D +++ +N +I +L+++I + GAILV+
Sbjct: 445 DYVRELRRRYSASTVDVIEMMEDDKVD-LN--LIVALIRYIVLEEEDGAILVF 494
>UNIPROTKB|E2QTL7 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
Ensembl:ENSCAFT00000013769 Uniprot:E2QTL7
Length = 988
Score = 303 (111.7 bits), Expect = 1.0e-41, Sum P(4) = 1.0e-41
Identities = 74/169 (43%), Positives = 99/169 (58%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPGWD I++LH + F S T+ Q +F P GVRKIV+A
Sbjct: 485 ILVFLPGWDNISTLHDLLMSQVMFKSD------------TIGQ--VFKKTPPGVRKIVIA 530
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITIDD+VYV+D GK K ++FD ++NI+T+ EW+S ANAKQR+GRAGR
Sbjct: 531 TNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGH 590
Query: 309 ETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTT---QRPGAILVFL 354
Y ++L D +L +++ + L+ +C R G I FL
Sbjct: 591 CYHLYNGLRASLLDDYQLP----EILRTPLEELCLQIKILRLGGIAYFL 635
Score = 133 (51.9 bits), Expect = 1.0e-41, Sum P(4) = 1.0e-41
Identities = 27/59 (45%), Positives = 39/59 (66%)
Query: 26 DPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
D LD +++ +K RY EM R+KLPSY M+ +++M+ N+Q+TVISGETG G
Sbjct: 171 DVALDQQLLEDLRKKKSDLRYIEMQHFREKLPSYGMQKELVNMIDNHQVTVISGETGCG 229
Score = 120 (47.3 bits), Expect = 3.8e-17, Sum P(3) = 3.8e-17
Identities = 25/60 (41%), Positives = 39/60 (65%)
Query: 316 DVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
DV+ M+ D +++ +N +I +L++HI + GAILVFLPGWD I++LH + F S
Sbjct: 454 DVMEMIDDDKVD-LN--LIAALIRHIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKS 510
Score = 87 (35.7 bits), Expect = 1.0e-41, Sum P(4) = 1.0e-41
Identities = 20/63 (31%), Positives = 32/63 (50%)
Query: 376 CLLY---EFAMVDNKPKEIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHPGTTA 432
CLL+ + ++ + +E I V + + F+ A ++KELR LD LL K+ P
Sbjct: 889 CLLFFGGDISIQKDNDQETIAVDEWIVFQSPARIAHLVKELRKELDTLLQEKIESPHPVD 948
Query: 433 WGD 435
W D
Sbjct: 949 WKD 951
Score = 62 (26.9 bits), Expect = 1.0e-41, Sum P(4) = 1.0e-41
Identities = 16/53 (30%), Positives = 30/53 (56%)
Query: 90 DFITLKRSETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVY 142
D++ R DV+ M+ D +++ +N +I +L++HI + GAILV+
Sbjct: 439 DYVRELRKRYSASTVDVMEMIDDDKVD-LN--LIAALIRHIVLEEEDGAILVF 488
>TAIR|locus:2009200 [details] [associations]
symbol:NIH "nuclear DEIH-boxhelicase" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003678
"DNA helicase activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006259 "DNA metabolic process" evidence=ISS]
InterPro:IPR002110 InterPro:IPR001374 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF01424 Pfam:PF04408 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 PROSITE:PS50297
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0008026 IPI:IPI00521146 RefSeq:NP_172152.1 UniGene:At.20810
PRIDE:F4IDQ6 EnsemblPlants:AT1G06670.1 GeneID:837177
KEGG:ath:AT1G06670 OMA:GNMEENT Uniprot:F4IDQ6
Length = 1576
Score = 334 (122.6 bits), Expect = 4.8e-40, Sum P(3) = 4.8e-40
Identities = 62/116 (53%), Positives = 85/116 (73%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFLPGW+ I+ + FF +S++F I+ LHS +P QK +FN PP G RKIVL
Sbjct: 578 ILVFLPGWEEISKTKEKLLDDRFFAHSAKFIILCLHSRVPAEEQKKVFNRPPRGCRKIVL 637
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
ATNIAE+++TIDD+VYV+D G+ K ++D ++++TL+ W+S ANAKQR GRAGR
Sbjct: 638 ATNIAESAVTIDDVVYVIDSGRMKEKSYDPYNDVSTLQSSWVSKANAKQRAGRAGR 693
Score = 115 (45.5 bits), Expect = 4.8e-40, Sum P(3) = 4.8e-40
Identities = 27/67 (40%), Positives = 40/67 (59%)
Query: 19 TRQKLLNDPV-LDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVI 77
T+ + N+ V L + KKE R ++E+ EAR KLP RDA++ V +NQ+ +I
Sbjct: 186 TKHDIENNVVSLSSRLKKE-------RHFREIFEARSKLPIASFRDAIISAVESNQVVLI 238
Query: 78 SGETGSG 84
+GETG G
Sbjct: 239 AGETGCG 245
Score = 104 (41.7 bits), Expect = 1.6e-08, Sum P(3) = 1.6e-08
Identities = 27/77 (35%), Positives = 42/77 (54%)
Query: 298 RGRAGRTLKRSETQQYPNDVLNM-LKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPG 356
R AG +S +QQ D+L+ + + E V+ +I L++ IC+ + GAILVFLPG
Sbjct: 528 REHAGNI--QSNSQQ-AQDLLDKYMATIKPEEVDVGLIVKLMKKICSDSKDGAILVFLPG 584
Query: 357 WDTINSLHRSMCQSSFF 373
W+ I+ + FF
Sbjct: 585 WEEISKTKEKLLDDRFF 601
Score = 56 (24.8 bits), Expect = 4.8e-40, Sum P(3) = 4.8e-40
Identities = 16/48 (33%), Positives = 29/48 (60%)
Query: 96 RSETQQYPNDVLNM-LKDPELEGVNNDVIFSLLQHICTTQRPGAILVY 142
+S +QQ D+L+ + + E V+ +I L++ IC+ + GAILV+
Sbjct: 535 QSNSQQ-AQDLLDKYMATIKPEEVDVGLIVKLMKKICSDSKDGAILVF 581
Score = 44 (20.5 bits), Expect = 8.6e-39, Sum P(3) = 8.6e-39
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 155 VFFCKN-VLQRLMKGVGANS 173
V FC N +L R++ G G NS
Sbjct: 313 VVFCTNGILLRVLIGKGVNS 332
>TAIR|locus:2008144 [details] [associations]
symbol:AT1G48650 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
EMBL:CP002684 GO:GO:0005524 Gene3D:3.30.160.20 GO:GO:0005622
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K14442
IPI:IPI00938568 RefSeq:NP_001154411.1 UniGene:At.22775
ProteinModelPortal:F4HYJ6 SMR:F4HYJ6 PRIDE:F4HYJ6
EnsemblPlants:AT1G48650.2 GeneID:841287 KEGG:ath:AT1G48650
OMA:GRIAYND Uniprot:F4HYJ6
Length = 1206
Score = 327 (120.2 bits), Expect = 2.3e-39, Sum P(4) = 2.3e-39
Identities = 67/142 (47%), Positives = 90/142 (63%)
Query: 189 ILVFLPGWDTINSLHRSM-CQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
+LVF+ GWD INSL + S + ++ ++ H + + Q+ IF+ PPEG+RKIVL
Sbjct: 581 VLVFMTGWDDINSLKNQLEAHSLLGDPNKVLLLACHGSMASSEQRLIFDRPPEGIRKIVL 640
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKR 307
ATN+AETSITI+D+VYV+DCGK K +++D +N L P WIS A A+QRRGRAGR +
Sbjct: 641 ATNMAETSITINDVVYVIDCGKAKETSYDALNNTPCLLPSWISKAAARQRRGRAGRVMPG 700
Query: 308 SETQQYPNDVLNMLKD---PEL 326
YP V D PEL
Sbjct: 701 ECYHLYPRCVYEAFADYQQPEL 722
Score = 108 (43.1 bits), Expect = 2.3e-39, Sum P(4) = 2.3e-39
Identities = 25/70 (35%), Positives = 41/70 (58%)
Query: 20 RQKLLNDPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISG 79
R+++L L K++ + + S Q+M+ RK LP+Y+ +DA+L + NQ+ V+SG
Sbjct: 265 RERILRPRSLQLKSKQQ--QWVDSPEGQKMVGFRKTLPAYKEKDALLKAIAANQVVVVSG 322
Query: 80 ETGSGPPLHL 89
ETG G L
Sbjct: 323 ETGCGKTTQL 332
Score = 100 (40.3 bits), Expect = 2.4e-08, Sum P(3) = 2.4e-08
Identities = 21/44 (47%), Positives = 29/44 (65%)
Query: 324 PELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSM 367
P+ G N +I ++L HI +RPGA+LVF+ GWD INSL +
Sbjct: 557 PDSIGFN--LIENVLCHIVKGERPGAVLVFMTGWDDINSLKNQL 598
Score = 59 (25.8 bits), Expect = 2.3e-39, Sum P(4) = 2.3e-39
Identities = 14/32 (43%), Positives = 21/32 (65%)
Query: 113 PELEGVNNDVIFSLLQHICTTQRPGAILVYCT 144
P+ G N +I ++L HI +RPGA+LV+ T
Sbjct: 557 PDSIGFN--LIENVLCHIVKGERPGAVLVFMT 586
Score = 50 (22.7 bits), Expect = 2.3e-39, Sum P(4) = 2.3e-39
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 398 LSFECKPSTAKIIKELRARLDMLLAHKLSHP 428
L F KP+ A L+ LD L+ +KL +P
Sbjct: 1014 LEFFMKPTLAYTYLSLKRELDELIQNKLVNP 1044
>FB|FBgn0032883 [details] [associations]
symbol:CG9323 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0002151 "G-quadruplex RNA binding"
evidence=IDA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:AE014134 GO:GO:0002151
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GeneTree:ENSGT00550000074257 KO:K14442 EMBL:AY095176
RefSeq:NP_610056.1 UniGene:Dm.11353 SMR:Q8SWT2 MINT:MINT-935813
EnsemblMetazoa:FBtr0081459 GeneID:35339 KEGG:dme:Dmel_CG9323
UCSC:CG9323-RA FlyBase:FBgn0032883 InParanoid:Q8SWT2 OMA:PLGMHLA
OrthoDB:EOG4HQC07 GenomeRNAi:35339 NextBio:793041 Uniprot:Q8SWT2
Length = 942
Score = 299 (110.3 bits), Expect = 1.5e-37, Sum P(4) = 1.5e-37
Identities = 68/181 (37%), Positives = 108/181 (59%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQ----IIPLHSMLPTVSQKSIFNTPPEGVRK 244
ILVFLPG+D I+ L+ + + R++ + PLHS++ + Q+++F PP G RK
Sbjct: 425 ILVFLPGYDKISQLYNILDKPKTSKGQRWRDHMAVFPLHSLMQSGEQQAVFRRPPAGQRK 484
Query: 245 IVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT 304
++++T IAETS+TIDD+VYV++ G+TK +N+D++ NI +L W++ AN +QRRGRAGR
Sbjct: 485 VIISTIIAETSVTIDDVVYVINSGRTKATNYDIETNIQSLDEVWVTKANTQQRRGRAGRV 544
Query: 305 ---LKRSETQQYPNDVLNMLKDPE-LEGVNNDVIFSL-LQHICTTQRPGAILVFLPGWDT 359
+ + + D ++ + PE L +I SL L HI R L+ P +
Sbjct: 545 RPGICYNLFSRAREDRMDDIPTPEILRSKLESIILSLKLLHIDDPYRFLQTLINAPNPEA 604
Query: 360 I 360
I
Sbjct: 605 I 605
Score = 114 (45.2 bits), Expect = 2.3e-11, Sum P(3) = 2.3e-11
Identities = 25/53 (47%), Positives = 35/53 (66%)
Query: 313 YPNDVLNMLKDPELEGVNN-DVIFSLLQHICTTQRPGAILVFLPGWDTINSLH 364
Y + VL+ L+ PE EG + D I L+ +IC + GAILVFLPG+D I+ L+
Sbjct: 387 YDSRVLDKLRLPESEGCEDIDFIADLVYYICENEPEGAILVFLPGYDKISQLY 439
Score = 108 (43.1 bits), Expect = 1.5e-37, Sum P(4) = 1.5e-37
Identities = 24/69 (34%), Positives = 38/69 (55%)
Query: 26 DPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGP 85
+P LD + E+ ++ ++ LEARKKLP+ + D ++ VR NQ+ +I G TG G
Sbjct: 123 NPKLDERLQLELGQRQLEENAKKRLEARKKLPTMKYADDIIQAVRENQVILIVGSTGCGK 182
Query: 86 PLHLDFITL 94
+ I L
Sbjct: 183 TTQVPQILL 191
Score = 76 (31.8 bits), Expect = 1.5e-37, Sum P(4) = 1.5e-37
Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 102 YPNDVLNMLKDPELEGVNN-DVIFSLLQHICTTQRPGAILVY 142
Y + VL+ L+ PE EG + D I L+ +IC + GAILV+
Sbjct: 387 YDSRVLDKLRLPESEGCEDIDFIADLVYYICENEPEGAILVF 428
Score = 62 (26.9 bits), Expect = 1.5e-37, Sum P(4) = 1.5e-37
Identities = 15/49 (30%), Positives = 24/49 (48%)
Query: 380 EFAMVDNKPKEIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHP 428
E + N P + V F+C TA ++ +LR+ L+ LL K +P
Sbjct: 857 EAGVTQNTP--YLCVAKTYYFKCNRETADVVIQLRSNLEKLLLKKALYP 903
>TAIR|locus:2038796 [details] [associations]
symbol:AT2G01130 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00358
SMART:SM00490 SMART:SM00847 InterPro:IPR014720 GO:GO:0005524
EMBL:CP002685 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K14442 IPI:IPI00528464
RefSeq:NP_178223.2 UniGene:At.42514 ProteinModelPortal:F4IM84
SMR:F4IM84 PRIDE:F4IM84 EnsemblPlants:AT2G01130.1 GeneID:814642
KEGG:ath:AT2G01130 OMA:PSWISKV Uniprot:F4IM84
Length = 1113
Score = 311 (114.5 bits), Expect = 6.3e-36, Sum P(4) = 6.3e-36
Identities = 70/167 (41%), Positives = 94/167 (56%)
Query: 189 ILVFLPGWDTINSLHRSM-CQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
IL+FL GWD I+SL + F N ++ H + T Q+ IF P GVRKIVL
Sbjct: 501 ILIFLTGWDDISSLKEKLQIHPIFGNPDLVMLLACHGSMETFEQRLIFEEPASGVRKIVL 560
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKR 307
ATNIAETSITI+D+ +V+DCGK K +++D +N L P WIS +A+QRRGRAGR
Sbjct: 561 ATNIAETSITINDVAFVIDCGKAKETSYDALNNTPCLLPSWISKVSAQQRRGRAGRVRPG 620
Query: 308 SETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFL 354
YP V + + +L + + SL I + G+I FL
Sbjct: 621 QCYHLYPKCVYDAFAEYQLPEILRTPLHSLCLQIKSLNL-GSISEFL 666
Score = 102 (41.0 bits), Expect = 6.3e-36, Sum P(4) = 6.3e-36
Identities = 19/38 (50%), Positives = 27/38 (71%)
Query: 47 QEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
Q ML++R LP+++ R +VL + NQ+ VISGETG G
Sbjct: 211 QRMLDSRTSLPAFKQRHSVLTAISQNQVIVISGETGCG 248
Score = 92 (37.4 bits), Expect = 5.2e-08, Sum P(3) = 5.2e-08
Identities = 20/44 (45%), Positives = 27/44 (61%)
Query: 324 PELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSM 367
P+ G N +I LL +IC + PG IL+FL GWD I+SL +
Sbjct: 477 PDCIGFN--LIEFLLCNICENEGPGGILIFLTGWDDISSLKEKL 518
Score = 60 (26.2 bits), Expect = 6.3e-36, Sum P(4) = 6.3e-36
Identities = 13/31 (41%), Positives = 19/31 (61%)
Query: 398 LSFECKPSTAKIIKELRARLDMLLAHKLSHP 428
L F KP A+I + L+ LD L+ +KL +P
Sbjct: 934 LEFFMKPDVAEIYQTLKKELDELIQNKLLNP 964
Score = 54 (24.1 bits), Expect = 6.3e-36, Sum P(4) = 6.3e-36
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 113 PELEGVNNDVIFSLLQHICTTQRPGAILVYCT 144
P+ G N +I LL +IC + PG IL++ T
Sbjct: 477 PDCIGFN--LIEFLLCNICENEGPGGILIFLT 506
>ZFIN|ZDB-GENE-030131-4078 [details] [associations]
symbol:dhx57 "DEAH (Asp-Glu-Ala-Asp/His) box
polypeptide 57" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001650 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-030131-4078 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00550000074257
EMBL:BX248102 EMBL:AL935288 EMBL:CT998560 IPI:IPI00513320
Ensembl:ENSDART00000080351 ArrayExpress:F1QCB1 Bgee:F1QCB1
Uniprot:F1QCB1
Length = 1430
Score = 280 (103.6 bits), Expect = 3.6e-35, Sum P(4) = 3.6e-35
Identities = 54/118 (45%), Positives = 77/118 (65%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQ---IIPLHSMLPTVSQKSIFNTPPEGVRKI 245
+LVFLPG I L+ + + FN+ R + PLHS L Q+++F P GV KI
Sbjct: 893 VLVFLPGLAEIKQLYEQLQSNRMFNNRRTNRCVVYPLHSSLSNEEQQAVFTRPQNGVTKI 952
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+++TNIAETS+TIDD+VYV+D G+ K +D ++ +L+ W+S ANA QR+GRAGR
Sbjct: 953 IISTNIAETSVTIDDVVYVIDSGRMKEKRYDASRSMESLEDVWVSRANALQRKGRAGR 1010
Score = 133 (51.9 bits), Expect = 3.6e-35, Sum P(4) = 3.6e-35
Identities = 32/77 (41%), Positives = 47/77 (61%)
Query: 35 KEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHL-DFIT 93
+E RK SRRY M E R+KLP++Q R+A+L+ + NQ+ VISG TG G + FI
Sbjct: 561 REFKRKRSSRRYISMQEQRQKLPAWQKREAILECLVKNQVLVISGMTGCGKTTQIPQFIL 620
Query: 94 LKRSETQQYPNDVLNML 110
+T + P+ V N++
Sbjct: 621 DNFLQTGR-PDRVANII 636
Score = 102 (41.0 bits), Expect = 8.0e-13, Sum P(3) = 8.0e-13
Identities = 27/92 (29%), Positives = 47/92 (51%)
Query: 313 YPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQR---PGAILVFLPGWDTINSLHRSMCQ 369
Y V+ L +L+ +N D++ SLL+ I PGA+LVFLPG I L+ +
Sbjct: 853 YSKSVVKTLAAMDLDKINMDLVESLLEWIVDGDHSYPPGAVLVFLPGLAEIKQLYEQLQS 912
Query: 370 SSFFNS-----CLLYEF-AMVDNKPKEIITVR 395
+ FN+ C++Y + + N+ ++ + R
Sbjct: 913 NRMFNNRRTNRCVVYPLHSSLSNEEQQAVFTR 944
Score = 68 (29.0 bits), Expect = 3.6e-35, Sum P(4) = 3.6e-35
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 407 AKIIKELRARLDMLLAHKLSHPGTTAWGDPNEGNILH 443
A+++KELR LD LL K+ +P P I+H
Sbjct: 1385 AELVKELRWELDQLLEEKIKNPSMDLISCPRGSRIIH 1421
Score = 59 (25.8 bits), Expect = 3.6e-35, Sum P(4) = 3.6e-35
Identities = 15/44 (34%), Positives = 24/44 (54%)
Query: 102 YPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQR---PGAILVY 142
Y V+ L +L+ +N D++ SLL+ I PGA+LV+
Sbjct: 853 YSKSVVKTLAAMDLDKINMDLVESLLEWIVDGDHSYPPGAVLVF 896
Score = 43 (20.2 bits), Expect = 6.0e-26, Sum P(4) = 6.0e-26
Identities = 7/13 (53%), Positives = 12/13 (92%)
Query: 35 KEMIRKLQSRRYQ 47
KE++R+LQ++ YQ
Sbjct: 124 KELLRELQNQEYQ 136
>TAIR|locus:504954904 [details] [associations]
symbol:ABO6 "ABA overly sensitive 6" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA;ISS] [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA;ISS]
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00358
SMART:SM00490 SMART:SM00847 InterPro:IPR014720 GO:GO:0005524
EMBL:CP002688 GenomeReviews:BA000015_GR Gene3D:3.30.160.20
GO:GO:0005622 GO:GO:0003725 EMBL:AB005245 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 EMBL:AB008271 HOGENOM:HOG000247063
KO:K14442 EMBL:AB025625 IPI:IPI00533344 RefSeq:NP_680142.2
UniGene:At.45659 ProteinModelPortal:Q9FF84 SMR:Q9FF84 PaxDb:Q9FF84
PRIDE:Q9FF84 EnsemblPlants:AT5G04895.1 GeneID:830371
KEGG:ath:AT5G04895 TAIR:At5g04895 InParanoid:Q9FF84 OMA:MRAGHSP
PhylomeDB:Q9FF84 ProtClustDB:CLSN2680421 Genevestigator:Q9FF84
Uniprot:Q9FF84
Length = 1161
Score = 292 (107.8 bits), Expect = 4.3e-33, Sum P(3) = 4.3e-33
Identities = 65/158 (41%), Positives = 88/158 (55%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNS-SRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
+LVFL GWD I SL + +R ++ H + T Q+ IF P +RKIVL
Sbjct: 542 VLVFLTGWDDIRSLSDQIKAHPLLGDPNRVLLLMCHGSMATAEQRLIFERAPPNIRKIVL 601
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKR 307
ATN+AE SITI+D+V+VVDCGK K + +D +N L P WIS A+A+QRRGRAGR
Sbjct: 602 ATNMAEASITINDVVFVVDCGKAKETTYDALNNTPCLLPSWISQASARQRRGRAGRLFPG 661
Query: 308 SETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQ 345
YP V + + +L + + SL I + Q
Sbjct: 662 ECYHLYPKCVYDAFAEYQLPELLRTPLNSLCLQIKSLQ 699
Score = 112 (44.5 bits), Expect = 6.9e-09, Sum P(2) = 6.9e-09
Identities = 26/61 (42%), Positives = 36/61 (59%)
Query: 305 LKRSETQQYPNDVLNMLKD--PELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINS 362
L +S + Y + + L P+ G N +I ++L HIC +RPGA+LVFL GWD I S
Sbjct: 497 LSKSNFESYNSRTRDSLSSWMPDCIGFN--LIEAVLCHICRKERPGAVLVFLTGWDDIRS 554
Query: 363 L 363
L
Sbjct: 555 L 555
Score = 107 (42.7 bits), Expect = 4.3e-33, Sum P(3) = 4.3e-33
Identities = 26/79 (32%), Positives = 42/79 (53%)
Query: 18 ETRQKLLNDPVLDAAFKKEMIR-KLQSRRYQE------MLEARKKLPSYQMRDAVLDMVR 70
E L+ V++ ++ +R + R +QE MLE RK LPS++ ++ +L +
Sbjct: 215 ENSDSFLDGSVMEKVLQRRSMRMRNMQRTWQESPEGRTMLEFRKTLPSFKDKERLLQAIA 274
Query: 71 NNQITVISGETGSGPPLHL 89
NQ+ V+SGETG G L
Sbjct: 275 RNQVIVVSGETGCGKTTQL 293
Score = 76 (31.8 bits), Expect = 4.3e-33, Sum P(3) = 4.3e-33
Identities = 19/53 (35%), Positives = 30/53 (56%)
Query: 94 LKRSETQQYPNDVLNMLKD--PELEGVNNDVIFSLLQHICTTQRPGAILVYCT 144
L +S + Y + + L P+ G N +I ++L HIC +RPGA+LV+ T
Sbjct: 497 LSKSNFESYNSRTRDSLSSWMPDCIGFN--LIEAVLCHICRKERPGAVLVFLT 547
Score = 38 (18.4 bits), Expect = 0.00010, Sum P(3) = 0.00010
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 159 KNVLQRLMKGVGANSPKRWVKLLRS 183
K++LQ L+ G + PK K L++
Sbjct: 1061 KSLLQTLLMRAGHSPPKYKTKHLKT 1085
>UNIPROTKB|E1C9G0 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00642 Pfam:PF04408 Pfam:PF05773
PROSITE:PS50103 PROSITE:PS51194 SMART:SM00356 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074257 OMA:RAYKGWQ
EMBL:AADN02041257 EMBL:AADN02041258 EMBL:AADN02041259
EMBL:AADN02041260 IPI:IPI00679513 Ensembl:ENSGALT00000023376
Uniprot:E1C9G0
Length = 1380
Score = 280 (103.6 bits), Expect = 1.2e-32, Sum P(3) = 1.2e-32
Identities = 56/118 (47%), Positives = 79/118 (66%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN---SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
+L+FLPG I L+ + ++ FN S R + PLHS L + Q+S+F PP GV KI
Sbjct: 843 VLIFLPGLAEIKMLYEQLQSNALFNNRHSKRCVVYPLHSSLSSEEQQSVFLRPPAGVIKI 902
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+++TNIAETS+TIDD+VYV+D GK K +D + +L+ ++S ANA QR+GRAGR
Sbjct: 903 IISTNIAETSVTIDDVVYVIDSGKMKEKRYDPSKGMESLEDTFVSRANALQRKGRAGR 960
Score = 137 (53.3 bits), Expect = 1.2e-32, Sum P(3) = 1.2e-32
Identities = 29/71 (40%), Positives = 44/71 (61%)
Query: 40 KLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHLDFITLKRSET 99
K SRR+Q ML R+KLP++Q R+ +LD++ ++Q+ V+SG TG G + L S
Sbjct: 521 KKSSRRFQSMLHERQKLPAWQERETILDLLTSHQVLVVSGMTGCGKTTQIPQFILDAS-L 579
Query: 100 QQYPNDVLNML 110
Q PN V N++
Sbjct: 580 QGSPNAVANII 590
Score = 87 (35.7 bits), Expect = 5.6e-11, Sum P(3) = 5.6e-11
Identities = 23/71 (32%), Positives = 40/71 (56%)
Query: 317 VLNMLKDPELEGVNNDVIFSLLQHICTTQR---PGAILVFLPGWDTINSLHRSMCQSSFF 373
VL + +L+ VN ++I +LL+ I + PGA+L+FLPG I L+ + ++ F
Sbjct: 807 VLKTMSVMDLDKVNLELIEALLEWIVDGKHSYPPGAVLIFLPGLAEIKMLYEQLQSNALF 866
Query: 374 NS-----CLLY 379
N+ C++Y
Sbjct: 867 NNRHSKRCVVY 877
Score = 60 (26.2 bits), Expect = 1.2e-32, Sum P(3) = 1.2e-32
Identities = 11/22 (50%), Positives = 16/22 (72%)
Query: 407 AKIIKELRARLDMLLAHKLSHP 428
A+++KELR LD LL K+ +P
Sbjct: 1335 AELVKELRCELDQLLQDKIKNP 1356
>UNIPROTKB|Q6P158 [details] [associations]
symbol:DHX57 "Putative ATP-dependent RNA helicase DHX57"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR009060 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00642 Pfam:PF04408 Pfam:PF05773
PROSITE:PS00690 PROSITE:PS50103 PROSITE:PS51194 SMART:SM00356
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 PROSITE:PS50030
EMBL:AC018693 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AK057423 EMBL:BC053623 EMBL:BC060778
EMBL:BC065278 EMBL:BC131534 EMBL:AF283512 IPI:IPI00168885
IPI:IPI00399364 IPI:IPI00749029 RefSeq:NP_945314.1
UniGene:Hs.468226 ProteinModelPortal:Q6P158 SMR:Q6P158
IntAct:Q6P158 STRING:Q6P158 PhosphoSite:Q6P158 DMDM:94710252
PaxDb:Q6P158 PeptideAtlas:Q6P158 PRIDE:Q6P158
Ensembl:ENST00000295373 GeneID:90957 KEGG:hsa:90957 UCSC:uc002rre.3
UCSC:uc002rrg.3 CTD:90957 GeneCards:GC02M039025 HGNC:HGNC:20086
HPA:HPA036160 neXtProt:NX_Q6P158 PharmGKB:PA134919698
HOVERGEN:HBG080658 InParanoid:Q6P158 KO:K13026 OMA:RAYKGWQ
OrthoDB:EOG4ZS929 PhylomeDB:Q6P158 ChiTaRS:DHX57 GenomeRNAi:90957
NextBio:77048 ArrayExpress:Q6P158 Bgee:Q6P158 CleanEx:HS_DHX57
Genevestigator:Q6P158 GermOnline:ENSG00000163214 Uniprot:Q6P158
Length = 1386
Score = 287 (106.1 bits), Expect = 2.2e-31, Sum P(3) = 2.2e-31
Identities = 60/118 (50%), Positives = 80/118 (67%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN---SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVFLPG I L+ + +S FN S+R I PLHS L + Q+++F PP GV KI
Sbjct: 850 ILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLHSSLSSEEQQAVFVKPPAGVTKI 909
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+++TNIAETSITIDD+VYV+D GK K +D + +L+ ++S ANA QR+GRAGR
Sbjct: 910 IISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGR 967
Score = 115 (45.5 bits), Expect = 2.2e-31, Sum P(3) = 2.2e-31
Identities = 25/76 (32%), Positives = 44/76 (57%)
Query: 35 KEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHLDFITL 94
K+ K SR++Q +L+ R+ LP+++ R+ +L+++R +Q+ VISG TG G + L
Sbjct: 523 KQFRMKQASRQFQSILQERQSLPAWEERETILNLLRKHQVVVISGMTGCGKTTQIPQFIL 582
Query: 95 KRSETQQYPNDVLNML 110
S P V N++
Sbjct: 583 DDSLNGP-PEKVANII 597
Score = 88 (36.0 bits), Expect = 8.5e-09, Sum P(3) = 8.5e-09
Identities = 23/62 (37%), Positives = 35/62 (56%)
Query: 317 VLNMLKDPELEGVNNDVIFSLLQHICTTQR---PGAILVFLPGWDTINSLHRSMCQSSFF 373
V+ + + E VN ++I +LL+ I + PGAILVFLPG I L+ + +S F
Sbjct: 814 VIKTMSIMDFEKVNLELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLF 873
Query: 374 NS 375
N+
Sbjct: 874 NN 875
Score = 61 (26.5 bits), Expect = 2.2e-31, Sum P(3) = 2.2e-31
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 407 AKIIKELRARLDMLLAHKLSHPGTTAWGDPNEGNIL 442
A+++KELR LD LL K+ +P P I+
Sbjct: 1341 AELVKELRCELDQLLQDKIKNPSIDLCTCPRGSRII 1376
Score = 38 (18.4 bits), Expect = 2.0e-23, Sum P(3) = 2.0e-23
Identities = 6/13 (46%), Positives = 10/13 (76%)
Query: 13 SVTSWETRQKLLN 25
S+ +WE R+ +LN
Sbjct: 543 SLPAWEERETILN 555
>FB|FBgn0002774 [details] [associations]
symbol:mle "maleless" species:7227 "Drosophila melanogaster"
[GO:0005700 "polytene chromosome" evidence=IDA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;TAS] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0000785 "chromatin"
evidence=IDA] [GO:0007549 "dosage compensation"
evidence=NAS;IMP;TAS] [GO:0009047 "dosage compensation by
hyperactivation of X chromosome" evidence=NAS] [GO:0045433 "male
courtship behavior, veined wing generated song production"
evidence=IGI] [GO:0016456 "X chromosome located dosage compensation
complex, transcription activating" evidence=NAS;TAS] [GO:0005694
"chromosome" evidence=NAS] [GO:0005634 "nucleus" evidence=IDA;NAS]
[GO:0003725 "double-stranded RNA binding" evidence=IEA;ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0016457 "dosage
compensation complex assembly involved in dosage compensation by
hyperactivation of X chromosome" evidence=TAS] [GO:0003724 "RNA
helicase activity" evidence=NAS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0048675 "axon extension" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0000805 "X chromosome" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0005665 "DNA-directed RNA polymerase II, core
complex" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001159 InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137
PROSITE:PS51194 SMART:SM00358 SMART:SM00490 SMART:SM00847
InterPro:IPR014720 EMBL:AE013599 GO:GO:0005524 GO:GO:0008340
Gene3D:3.30.160.20 GO:GO:0045944 GO:GO:0000785 GO:GO:0003682
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0045433 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0048675 GO:GO:0003724
GeneTree:ENSGT00550000074257 KO:K13184 OMA:DDWIRLQ GO:GO:0016456
EMBL:M74121 EMBL:BT003785 EMBL:BT010267 PIR:B40025
RefSeq:NP_476641.1 RefSeq:NP_724440.1 UniGene:Dm.2901
ProteinModelPortal:P24785 SMR:P24785 IntAct:P24785 MINT:MINT-768581
STRING:P24785 PaxDb:P24785 PRIDE:P24785 EnsemblMetazoa:FBtr0086031
GeneID:35523 KEGG:dme:Dmel_CG11680 CTD:35523 FlyBase:FBgn0002774
InParanoid:P24785 OrthoDB:EOG47H44V PhylomeDB:P24785
GenomeRNAi:35523 NextBio:793836 Bgee:P24785 GermOnline:CG11680
GO:GO:0016457 Uniprot:P24785
Length = 1293
Score = 293 (108.2 bits), Expect = 1.2e-30, Sum P(4) = 1.2e-30
Identities = 57/116 (49%), Positives = 81/116 (69%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFLPGW+ I +L + + ++ F ++S++QI+P HS +P Q+ +F PEGV KI+L
Sbjct: 656 ILVFLPGWNLIFALMKFLQNTNIFGDTSQYQILPCHSQIPRDEQRKVFEPVPEGVTKIIL 715
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+TNIAETSITIDDIV+V+D K +M F +N+ + W S N +QR+GRAGR
Sbjct: 716 STNIAETSITIDDIVFVIDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGR 771
Score = 99 (39.9 bits), Expect = 1.4e-06, Sum P(3) = 1.4e-06
Identities = 23/69 (33%), Positives = 40/69 (57%)
Query: 312 QYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSS 371
Q + + ML + + V+ +++ +LL HI + PGAILVFLPGW+ I +L + + ++
Sbjct: 621 QKTRNAMAMLSESD---VSFELLEALLMHIKSKNIPGAILVFLPGWNLIFALMKFLQNTN 677
Query: 372 FFNSCLLYE 380
F Y+
Sbjct: 678 IFGDTSQYQ 686
Score = 93 (37.8 bits), Expect = 1.2e-30, Sum P(4) = 1.2e-30
Identities = 17/46 (36%), Positives = 26/46 (56%)
Query: 39 RKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
R+ Y++ LE R+KLP MR +L + +N + +I G TG G
Sbjct: 367 RRQNDNEYRQFLEFREKLPIAAMRSEILTAINDNPVVIIRGNTGCG 412
Score = 53 (23.7 bits), Expect = 1.2e-30, Sum P(4) = 1.2e-30
Identities = 14/42 (33%), Positives = 25/42 (59%)
Query: 101 QYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVY 142
Q + + ML + + V+ +++ +LL HI + PGAILV+
Sbjct: 621 QKTRNAMAMLSESD---VSFELLEALLMHIKSKNIPGAILVF 659
Score = 50 (22.7 bits), Expect = 1.2e-30, Sum P(4) = 1.2e-30
Identities = 13/52 (25%), Positives = 25/52 (48%)
Query: 377 LLYEFAMVDNKPKEIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHP 428
+L+ +D I+ V + L+F+ +P A I L+ L+ L+ +P
Sbjct: 1075 ILFGSRKIDLAANNIVRVDNWLNFDIEPELAAKIGALKPALEDLITVACDNP 1126
>RGD|1308548 [details] [associations]
symbol:Dhx9 "DEAH (Asp-Glu-Ala-His) box polypeptide 9"
species:10116 "Rattus norvegicus" [GO:0001085 "RNA polymerase II
transcription factor binding" evidence=IEA;ISO] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0007623 "circadian rhythm" evidence=IEA;ISO]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA;ISO]
[GO:0034605 "cellular response to heat" evidence=IEA;ISO]
[GO:0070934 "CRD-mediated mRNA stabilization" evidence=IEA;ISO]
[GO:0070937 "CRD-mediated mRNA stability complex" evidence=IEA;ISO]
InterPro:IPR001159 InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137
PROSITE:PS51194 SMART:SM00358 SMART:SM00490 SMART:SM00847
InterPro:IPR014720 RGD:1308548 GO:GO:0005524 Gene3D:3.30.160.20
GO:GO:0005622 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:1660 KO:K13184 OrthoDB:EOG4HHP1J
EMBL:CH473958 IPI:IPI00947663 RefSeq:NP_001100654.1
UniGene:Rn.107359 Ensembl:ENSRNOT00000064860 GeneID:304859
KEGG:rno:304859 UCSC:RGD:1308548 NextBio:653729 Uniprot:D4A9D6
Length = 1174
Score = 305 (112.4 bits), Expect = 2.3e-30, Sum P(4) = 2.3e-30
Identities = 58/121 (47%), Positives = 83/121 (68%)
Query: 185 LVVP--ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGV 242
L VP +LVFLPGW+ I ++ + + +S F S R+QI+PLHS +P Q+ +F+ P+GV
Sbjct: 650 LNVPGAVLVFLPGWNLIYTMQKHLENNSHFGSHRYQILPLHSQIPREEQRKVFDPVPDGV 709
Query: 243 RKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAG 302
K++L+TNIAETSITI+D+VYV+D K K+ F +N+ W S N +QR+GRAG
Sbjct: 710 TKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAG 769
Query: 303 R 303
R
Sbjct: 770 R 770
Score = 98 (39.6 bits), Expect = 0.00010, Sum P(3) = 0.00010
Identities = 24/62 (38%), Positives = 38/62 (61%)
Query: 314 PNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFF 373
P L+M + E E ++I +LL++I T PGA+LVFLPGW+ I ++ + + +S F
Sbjct: 621 PETKLSMSQLNEKE-TPFELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLENNSHF 679
Query: 374 NS 375
S
Sbjct: 680 GS 681
Score = 73 (30.8 bits), Expect = 2.3e-30, Sum P(4) = 2.3e-30
Identities = 15/52 (28%), Positives = 27/52 (51%)
Query: 34 KKEMIRKL-QSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
K E+ ++ Q Q +L+ R+ LP + +L+ + N + +I G TG G
Sbjct: 368 KNELAYQMEQDHNLQSVLQERELLPVKKFEAEILEAISQNSVVIIRGATGCG 419
Score = 51 (23.0 bits), Expect = 2.3e-30, Sum P(4) = 2.3e-30
Identities = 14/61 (22%), Positives = 26/61 (42%)
Query: 390 EIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHPGTTAWGDPNEGNILHCCSGFS 449
+I+ + D + + A I LRA ++ L+ P + DP ++L+ S
Sbjct: 1083 QIVFIDDWIRLQISHEAAACITALRAAMEALVVEVSKQPNIISQLDPVNEHMLNTIRQIS 1142
Query: 450 R 450
R
Sbjct: 1143 R 1143
Score = 49 (22.3 bits), Expect = 2.3e-30, Sum P(4) = 2.3e-30
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 103 PNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVY 142
P L+M + E E ++I +LL++I T PGA+LV+
Sbjct: 621 PETKLSMSQLNEKE-TPFELIEALLKYIETLNVPGAVLVF 659
>FB|FBgn0030246 [details] [associations]
symbol:CG1582 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001650 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014298 GO:GO:0008270 GO:GO:0006200 GO:GO:0003676
GO:GO:0004386 Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 KO:K13026 EMBL:AY119481
RefSeq:NP_572663.1 UniGene:Dm.11248 SMR:Q9VZ55
EnsemblMetazoa:FBtr0073403 GeneID:32021 KEGG:dme:Dmel_CG1582
UCSC:CG1582-RA FlyBase:FBgn0030246 InParanoid:Q9VZ55 OMA:IFQCLDS
OrthoDB:EOG4RJDGG ChiTaRS:CG1582 GenomeRNAi:32021 NextBio:776414
Uniprot:Q9VZ55
Length = 1288
Score = 302 (111.4 bits), Expect = 2.4e-30, Sum P(3) = 2.4e-30
Identities = 61/119 (51%), Positives = 81/119 (68%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN--SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIV 246
IL+FLPG+ I S+H S+ ++ F+ + +F ++PLHS L Q +F P G RKIV
Sbjct: 755 ILIFLPGFGEIQSVHDSLLDNALFSPRAGKFILVPLHSALSGEDQALVFKKAPPGKRKIV 814
Query: 247 LATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTL 305
L+TNIAETS+TIDD V+VVDCG K FD N+ +L W+S ANAKQR+GRAGR +
Sbjct: 815 LSTNIAETSVTIDDCVFVVDCGLMKEKCFDSNRNMESLDLVWVSRANAKQRKGRAGRVM 873
Score = 104 (41.7 bits), Expect = 2.4e-30, Sum P(3) = 2.4e-30
Identities = 16/50 (32%), Positives = 35/50 (70%)
Query: 35 KEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
++ + + + RYQ++++ RK+LP++ + +L ++ ++ + VISGETG G
Sbjct: 432 QQFVERRKEERYQKIIDGRKQLPAFAEIERILALIESSPVVVISGETGCG 481
Score = 80 (33.2 bits), Expect = 6.2e-05, Sum P(3) = 6.2e-05
Identities = 18/50 (36%), Positives = 31/50 (62%)
Query: 329 VNNDVIFSLLQHICTTQ----RPGAILVFLPGWDTINSLHRSMCQSSFFN 374
+N ++I S+L++I R G IL+FLPG+ I S+H S+ ++ F+
Sbjct: 730 INPELIESVLKYIVEGSHDWPREGTILIFLPGFGEIQSVHDSLLDNALFS 779
Score = 41 (19.5 bits), Expect = 2.4e-30, Sum P(3) = 2.4e-30
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 406 TAKIIKELRARLDMLLAHKLSHP 428
TA++++ LRA + LL K+ P
Sbjct: 1241 TAEMVQCLRAEMIKLLEEKIRDP 1263
>UNIPROTKB|H7BXY3 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HGNC:HGNC:16716 EMBL:AC139667 EMBL:AC026318
ProteinModelPortal:H7BXY3 SMR:H7BXY3 PRIDE:H7BXY3
Ensembl:ENST00000348968 Bgee:H7BXY3 Uniprot:H7BXY3
Length = 1166
Score = 315 (115.9 bits), Expect = 3.0e-30, Sum P(3) = 3.0e-30
Identities = 61/115 (53%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 643 ILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLA 702
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 703 TNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 757
Score = 80 (33.2 bits), Expect = 3.0e-30, Sum P(3) = 3.0e-30
Identities = 24/86 (27%), Positives = 42/86 (48%)
Query: 24 LNDPVLDAAF----KKEMIRKLQS-----RRYQEMLEARKKLPSYQMRDAVLDMVRNNQI 74
L+DP+ + + E +R QS RR + + +LP RD +L+ + + +
Sbjct: 365 LSDPITGKPYVPLLEAEEVRLSQSLLELWRRRGPVWQEAPQLPVDPHRDTILNAIEQHPV 424
Query: 75 TVISGETGSGPPLHLDFITLKRSETQ 100
VISG+TG G + + L+R T+
Sbjct: 425 VVISGDTGCGKTTRIPQLLLERYVTE 450
Score = 43 (20.2 bits), Expect = 3.0e-30, Sum P(3) = 3.0e-30
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 396 DCLSFECKPSTAKIIKELRARLDMLLAHKL 425
D L E T +++KELR L ++ L
Sbjct: 1096 DLLRLEGDSRTVRLLKELRRALGRMVERSL 1125
>UNIPROTKB|F1MNU7 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 CTD:64848 OMA:RAFWESS EMBL:DAAA02027655
IPI:IPI00689346 RefSeq:NP_001179740.1 UniGene:Bt.24975
ProteinModelPortal:F1MNU7 Ensembl:ENSBTAT00000018745 GeneID:541024
KEGG:bta:541024 NextBio:20878969 Uniprot:F1MNU7
Length = 1429
Score = 293 (108.2 bits), Expect = 3.2e-30, Sum P(4) = 3.2e-30
Identities = 60/118 (50%), Positives = 80/118 (67%)
Query: 189 ILVFLPGWDTINSLH-RSMCQSSFF--NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
IL+FLPG+D I L R + F N+ R+Q+ LHS + T QK + PP GVRKI
Sbjct: 624 ILIFLPGYDEIVGLRDRILFDDKRFAENAHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKI 683
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+L+TNIAETSIT++D+V+V+D GK K +FD + + LK WIS A+A QR+GRAGR
Sbjct: 684 ILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGR 741
Score = 75 (31.5 bits), Expect = 3.2e-30, Sum P(4) = 3.2e-30
Identities = 11/32 (34%), Positives = 24/32 (75%)
Query: 53 RKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
R+ LP ++ ++ ++ +++ N++ +I GETGSG
Sbjct: 189 RQSLPVFEKQEEIVKIIKENKVVLIVGETGSG 220
Score = 64 (27.6 bits), Expect = 3.2e-30, Sum P(4) = 3.2e-30
Identities = 26/106 (24%), Positives = 46/106 (43%)
Query: 342 CTTQRPGAILVFL-PGWDTINSLHRSMCQSSFFNSCLLYEFA---MVDNKPKEIITVR-- 395
C+ P +LVF P N+L SSF + + + M D + T++
Sbjct: 1051 CSAVTPVTVLVFCGPARLASNALQEP---SSFRADGIPNDSSDSEMEDRTTANLATLKLD 1107
Query: 396 DCLSFECKPSTAKIIKELRARLDMLLAHKLSHPGTTAWGDPNEGNI 441
+ LSF+ +P A ++ +LR + L ++ P + W +E I
Sbjct: 1108 EWLSFKLEPEAASLLLQLRQKWHSLFLRRMRAP-SKPWSQVDEATI 1152
Score = 55 (24.4 bits), Expect = 3.2e-30, Sum P(4) = 3.2e-30
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 116 EGVNNDVIFSLLQHICTTQRPGAILVY 142
E V+ D+I LL +IC + GAIL++
Sbjct: 601 EKVDLDLIMHLLYNICHSCEAGAILIF 627
Score = 41 (19.5 bits), Expect = 9.6e-27, Sum P(4) = 9.6e-27
Identities = 16/66 (24%), Positives = 27/66 (40%)
Query: 35 KEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHLDFITL 94
K +R L R E + LP + + N +++ SG +G P I +
Sbjct: 123 KHAVRSLIQRFPVTNKERTELLPKTERGNVFAVEAENREMSKTSGRLNNGIPQ----IPV 178
Query: 95 KRSETQ 100
KR E++
Sbjct: 179 KRGESE 184
>UNIPROTKB|Q7L2E3 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0042645 "mitochondrial nucleoid" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003682
GO:GO:0003723 GO:GO:0042645 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OrthoDB:EOG4VHK5M EMBL:AB020697 EMBL:AK002076
EMBL:AK291266 EMBL:BC014237 EMBL:BC015029 EMBL:BC020126
EMBL:BC038417 IPI:IPI00411733 IPI:IPI00926109 IPI:IPI00927809
PIR:E56236 RefSeq:NP_055781.2 RefSeq:NP_619520.1 UniGene:Hs.517948
PDB:2DB2 PDBsum:2DB2 ProteinModelPortal:Q7L2E3 SMR:Q7L2E3
IntAct:Q7L2E3 MINT:MINT-1186537 STRING:Q7L2E3 PhosphoSite:Q7L2E3
DMDM:74758997 PaxDb:Q7L2E3 PRIDE:Q7L2E3 DNASU:22907
Ensembl:ENST00000445061 Ensembl:ENST00000446256
Ensembl:ENST00000457607 GeneID:22907 KEGG:hsa:22907 UCSC:uc003crt.3
UCSC:uc003cru.3 GeneCards:GC03P047844 HGNC:HGNC:16716 HPA:HPA034806
neXtProt:NX_Q7L2E3 PharmGKB:PA27217 InParanoid:Q7L2E3 OMA:LHKEERY
PhylomeDB:Q7L2E3 EvolutionaryTrace:Q7L2E3 GenomeRNAi:22907
NextBio:43571 ArrayExpress:Q7L2E3 Bgee:Q7L2E3 CleanEx:HS_DHX30
Genevestigator:Q7L2E3 Uniprot:Q7L2E3
Length = 1194
Score = 315 (115.9 bits), Expect = 3.4e-30, Sum P(3) = 3.4e-30
Identities = 61/115 (53%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 671 ILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLA 730
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 731 TNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 785
Score = 80 (33.2 bits), Expect = 3.4e-30, Sum P(3) = 3.4e-30
Identities = 24/86 (27%), Positives = 42/86 (48%)
Query: 24 LNDPVLDAAF----KKEMIRKLQS-----RRYQEMLEARKKLPSYQMRDAVLDMVRNNQI 74
L+DP+ + + E +R QS RR + + +LP RD +L+ + + +
Sbjct: 393 LSDPITGKPYVPLLEAEEVRLSQSLLELWRRRGPVWQEAPQLPVDPHRDTILNAIEQHPV 452
Query: 75 TVISGETGSGPPLHLDFITLKRSETQ 100
VISG+TG G + + L+R T+
Sbjct: 453 VVISGDTGCGKTTRIPQLLLERYVTE 478
Score = 43 (20.2 bits), Expect = 3.4e-30, Sum P(3) = 3.4e-30
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 396 DCLSFECKPSTAKIIKELRARLDMLLAHKL 425
D L E T +++KELR L ++ L
Sbjct: 1124 DLLRLEGDSRTVRLLKELRRALGRMVERSL 1153
>UNIPROTKB|G5E5N3 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9913
"Bos taurus" [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=IEA] [GO:0070934 "CRD-mediated mRNA stabilization"
evidence=IEA] [GO:0034605 "cellular response to heat" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001085
"RNA polymerase II transcription factor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 GO:GO:0005524 GO:GO:0005813
GO:GO:0034605 GO:GO:0005730 Gene3D:3.30.160.20 GO:GO:0030529
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 UniGene:Bt.5544 GO:GO:0070937
OMA:DDWIRLQ GO:GO:0070934 EMBL:DAAA02043563 EMBL:DAAA02043564
Ensembl:ENSBTAT00000026409 Uniprot:G5E5N3
Length = 1287
Score = 299 (110.3 bits), Expect = 4.0e-30, Sum P(4) = 4.0e-30
Identities = 58/121 (47%), Positives = 81/121 (66%)
Query: 185 LVVP--ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGV 242
L VP +LVFLPGW+ I ++ + + + F S R+QI+PLHS +P Q+ +F+ P GV
Sbjct: 644 LNVPGAVLVFLPGWNLIYTMQKHLEMNPHFGSHRYQILPLHSQIPREEQRKVFDPVPSGV 703
Query: 243 RKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAG 302
KI+L+TNIAETSITI+D+VYV+D K K+ F +N+ W S N +QR+GRAG
Sbjct: 704 TKIILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAG 763
Query: 303 R 303
R
Sbjct: 764 R 764
Score = 89 (36.4 bits), Expect = 6.1e-05, Sum P(3) = 6.1e-05
Identities = 18/44 (40%), Positives = 29/44 (65%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
++I +LL +I T PGA+LVFLPGW+ I ++ + + + F S
Sbjct: 632 ELIEALLLYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHFGS 675
Score = 80 (33.2 bits), Expect = 4.0e-30, Sum P(4) = 4.0e-30
Identities = 17/52 (32%), Positives = 29/52 (55%)
Query: 34 KKEMIRKL-QSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
K E++ +L Q R Q +L+ R+ LP + +L+ + N + +I G TG G
Sbjct: 362 KNELMYQLEQDRDLQAVLQERELLPVKKFESEILEAISQNPVVIIRGATGCG 413
Score = 57 (25.1 bits), Expect = 4.0e-30, Sum P(4) = 4.0e-30
Identities = 15/61 (24%), Positives = 26/61 (42%)
Query: 390 EIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHPGTTAWGDPNEGNILHCCSGFS 449
+++ V D + + A I LRA ++ L+ PG + DP +L+ S
Sbjct: 1077 QLVLVDDWIRLQISHEAAACITALRAAMEALVVEVTKQPGIISQLDPVNERMLNTIRQIS 1136
Query: 450 R 450
R
Sbjct: 1137 R 1137
Score = 45 (20.9 bits), Expect = 4.0e-30, Sum P(4) = 4.0e-30
Identities = 10/22 (45%), Positives = 16/22 (72%)
Query: 121 DVIFSLLQHICTTQRPGAILVY 142
++I +LL +I T PGA+LV+
Sbjct: 632 ELIEALLLYIETLNVPGAVLVF 653
>UNIPROTKB|Q28141 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9913
"Bos taurus" [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=ISS] [GO:0030529 "ribonucleoprotein complex" evidence=ISS]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 GO:GO:0005730 GO:GO:0003677 Gene3D:3.30.160.20
GO:GO:0030529 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000247063 EMBL:X82829 IPI:IPI00714708
PIR:I46032 RefSeq:NP_776461.1 UniGene:Bt.5544
ProteinModelPortal:Q28141 SMR:Q28141 STRING:Q28141 PRIDE:Q28141
GeneID:281115 KEGG:bta:281115 CTD:1660 HOVERGEN:HBG039429
InParanoid:Q28141 KO:K13184 OrthoDB:EOG4HHP1J NextBio:20805185
GO:GO:0070937 Uniprot:Q28141
Length = 1287
Score = 299 (110.3 bits), Expect = 4.0e-30, Sum P(4) = 4.0e-30
Identities = 58/121 (47%), Positives = 81/121 (66%)
Query: 185 LVVP--ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGV 242
L VP +LVFLPGW+ I ++ + + + F S R+QI+PLHS +P Q+ +F+ P GV
Sbjct: 644 LNVPGAVLVFLPGWNLIYTMQKHLEMNPHFGSHRYQILPLHSQIPREEQRKVFDPVPSGV 703
Query: 243 RKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAG 302
KI+L+TNIAETSITI+D+VYV+D K K+ F +N+ W S N +QR+GRAG
Sbjct: 704 TKIILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAG 763
Query: 303 R 303
R
Sbjct: 764 R 764
Score = 89 (36.4 bits), Expect = 6.1e-05, Sum P(3) = 6.1e-05
Identities = 18/44 (40%), Positives = 29/44 (65%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
++I +LL +I T PGA+LVFLPGW+ I ++ + + + F S
Sbjct: 632 ELIEALLLYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHFGS 675
Score = 80 (33.2 bits), Expect = 4.0e-30, Sum P(4) = 4.0e-30
Identities = 17/52 (32%), Positives = 29/52 (55%)
Query: 34 KKEMIRKL-QSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
K E++ +L Q R Q +L+ R+ LP + +L+ + N + +I G TG G
Sbjct: 362 KNELMYQLEQDRDLQAVLQERELLPVKKFESEILEAISQNPVVIIRGATGCG 413
Score = 57 (25.1 bits), Expect = 4.0e-30, Sum P(4) = 4.0e-30
Identities = 15/61 (24%), Positives = 26/61 (42%)
Query: 390 EIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHPGTTAWGDPNEGNILHCCSGFS 449
+++ V D + + A I LRA ++ L+ PG + DP +L+ S
Sbjct: 1077 QLVLVDDWIRLQISHEAAACITALRAAMEALVVEVTKQPGIISQLDPVNERMLNTIRQIS 1136
Query: 450 R 450
R
Sbjct: 1137 R 1137
Score = 45 (20.9 bits), Expect = 4.0e-30, Sum P(4) = 4.0e-30
Identities = 10/22 (45%), Positives = 16/22 (72%)
Query: 121 DVIFSLLQHICTTQRPGAILVY 142
++I +LL +I T PGA+LV+
Sbjct: 632 ELIEALLLYIETLNVPGAVLVF 653
>UNIPROTKB|E2QX71 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR001650 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR009060 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940
SMART:SM00165 PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074257 CTD:90957 KO:K13026
OMA:RAYKGWQ EMBL:AAEX03010868 RefSeq:XP_540155.1
Ensembl:ENSCAFT00000010087 GeneID:483040 KEGG:cfa:483040
Uniprot:E2QX71
Length = 1382
Score = 283 (104.7 bits), Expect = 6.4e-30, Sum P(3) = 6.4e-30
Identities = 59/118 (50%), Positives = 79/118 (66%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN---SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVFLPG I L+ + +S FN S R + PLHS L + Q+++F PP GV KI
Sbjct: 846 ILVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVVHPLHSSLSSEEQQAVFVKPPVGVTKI 905
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+++TNIAETSITIDD+VYV+D GK K +D + +L+ ++S ANA QR+GRAGR
Sbjct: 906 IISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGR 963
Score = 106 (42.4 bits), Expect = 6.4e-30, Sum P(3) = 6.4e-30
Identities = 25/81 (30%), Positives = 45/81 (55%)
Query: 30 DAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHL 89
+A K+ K SR++Q +L+ R+ LP+++ R+ +L ++ +Q+ VISG TG G +
Sbjct: 514 NAKICKQFRIKQASRQFQSILQERQSLPAWEERETILKLLSEHQVLVISGMTGCGKTTQI 573
Query: 90 DFITLKRSETQQYPNDVLNML 110
L S + P V N++
Sbjct: 574 PQFILDDSLSGP-PEKVANII 593
Score = 88 (36.0 bits), Expect = 7.8e-08, Sum P(3) = 7.8e-08
Identities = 23/62 (37%), Positives = 35/62 (56%)
Query: 317 VLNMLKDPELEGVNNDVIFSLLQHICTTQR---PGAILVFLPGWDTINSLHRSMCQSSFF 373
V+ + + E VN ++I +LL+ I + PGAILVFLPG I L+ + +S F
Sbjct: 810 VIKTMSIMDFEKVNLELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLF 869
Query: 374 NS 375
N+
Sbjct: 870 NN 871
Score = 61 (26.5 bits), Expect = 6.4e-30, Sum P(3) = 6.4e-30
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 407 AKIIKELRARLDMLLAHKLSHPGTTAWGDPNEGNIL 442
A+++KELR LD LL K+ +P P I+
Sbjct: 1337 AELVKELRCELDQLLQDKIKNPSIDLCTCPRGSRII 1372
>UNIPROTKB|F1N1A2 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 PROSITE:PS50030
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 OMA:RAYKGWQ EMBL:DAAA02030601
EMBL:DAAA02030599 EMBL:DAAA02030600 IPI:IPI00709831
Ensembl:ENSBTAT00000019540 ArrayExpress:F1N1A2 Uniprot:F1N1A2
Length = 1382
Score = 286 (105.7 bits), Expect = 8.6e-30, Sum P(3) = 8.6e-30
Identities = 60/118 (50%), Positives = 80/118 (67%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN---SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVFLPG I L+ + +S FN S+R I PLHS L + Q+++F PP GV KI
Sbjct: 845 ILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLHSSLSSEEQQAVFVKPPMGVTKI 904
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+++TNIAETSITIDD+VYV+D GK K +D + +L+ ++S ANA QR+GRAGR
Sbjct: 905 IISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGR 962
Score = 101 (40.6 bits), Expect = 8.6e-30, Sum P(3) = 8.6e-30
Identities = 23/76 (30%), Positives = 42/76 (55%)
Query: 35 KEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHLDFITL 94
K+ K SR++Q +L+ R+ LP+++ R+ +L ++ +Q+ V+SG TG G + L
Sbjct: 516 KQFRIKQASRQFQSVLQERQSLPAWEERENILKLLSKHQVLVVSGMTGCGKTTQIPQFIL 575
Query: 95 KRSETQQYPNDVLNML 110
S P V N++
Sbjct: 576 DDSLNGP-PEKVANII 590
Score = 85 (35.0 bits), Expect = 5.3e-07, Sum P(3) = 5.3e-07
Identities = 24/70 (34%), Positives = 36/70 (51%)
Query: 311 QQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQR-----PGAILVFLPGWDTINSLHR 365
Q V+ + + E VN ++I +LL+ I + PGAILVFLPG I L+
Sbjct: 801 QGVSKSVIKTMSVMDFEKVNLELIEALLEWIVDGKHSYPPDPGAILVFLPGLAEIKMLYE 860
Query: 366 SMCQSSFFNS 375
+ +S FN+
Sbjct: 861 QLQSNSLFNN 870
Score = 61 (26.5 bits), Expect = 8.6e-30, Sum P(3) = 8.6e-30
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 407 AKIIKELRARLDMLLAHKLSHPGTTAWGDPNEGNIL 442
A+++KELR LD LL K+ +P P I+
Sbjct: 1337 AELVKELRCELDQLLQDKIKNPSIDLCTCPRGSRII 1372
>MGI|MGI:2145374 [details] [associations]
symbol:Dhx29 "DEAH (Asp-Glu-Ala-His) box polypeptide 29"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0006412 "translation"
evidence=IEA] [GO:0006413 "translational initiation" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:2145374
GO:GO:0005739 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 CTD:54505 HOGENOM:HOG000247063
HOVERGEN:HBG081436 OMA:WLLYQEK OrthoDB:EOG43FGW2 EMBL:BC057112
EMBL:BC082319 EMBL:AK028342 EMBL:AK042066 EMBL:AK042497
EMBL:AK049530 IPI:IPI00410936 RefSeq:NP_766182.2 UniGene:Mm.35094
ProteinModelPortal:Q6PGC1 SMR:Q6PGC1 STRING:Q6PGC1
PhosphoSite:Q6PGC1 PaxDb:Q6PGC1 PRIDE:Q6PGC1
Ensembl:ENSMUST00000038574 GeneID:218629 KEGG:mmu:218629
UCSC:uc007rwx.1 GeneTree:ENSGT00550000074257 InParanoid:Q6PGC1
NextBio:376359 Bgee:Q6PGC1 CleanEx:MM_DHX29 Genevestigator:Q6PGC1
GermOnline:ENSMUSG00000042426 Uniprot:Q6PGC1
Length = 1365
Score = 274 (101.5 bits), Expect = 9.9e-30, Sum P(3) = 9.9e-30
Identities = 56/115 (48%), Positives = 77/115 (66%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+L+FLPG I L+ + F S R+Q+I LHS+L T Q + F PP GVRKIVLA
Sbjct: 869 VLIFLPGLAHIQQLYDLLSSDRRFYSERYQVIALHSVLSTQDQAAAFMFPPPGVRKIVLA 928
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAET ITI D+V+V+D G+TK + + +++L ++S A+A QR+GRAGR
Sbjct: 929 TNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGR 983
Score = 120 (47.3 bits), Expect = 9.9e-30, Sum P(3) = 9.9e-30
Identities = 21/56 (37%), Positives = 42/56 (75%)
Query: 30 DAAFKKEMIRKLQSR-RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
D A + + R+LQS +YQ +L+ R++LP ++ RD++++ ++ +++ V++GETGSG
Sbjct: 544 DLAPVRSLFRRLQSTPKYQRLLKERQQLPVFKHRDSIVETLKRHRVVVVAGETGSG 599
Score = 56 (24.8 bits), Expect = 9.9e-30, Sum P(3) = 9.9e-30
Identities = 12/40 (30%), Positives = 22/40 (55%)
Query: 389 KEIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHP 428
+ +++V + F+ A I K+LR +D +L KL +P
Sbjct: 1304 ERLLSVDGWIYFQAPVKIAVIFKQLRVLIDSVLRKKLENP 1343
Score = 56 (24.8 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 16/51 (31%), Positives = 26/51 (50%)
Query: 329 VNNDVIFSLLQHICTTQR----PGAILVFLPGWDTINSLHRSMCQSSFFNS 375
+N D+I LL ++ + + GA+L+FLPG I L+ + F S
Sbjct: 844 INLDLILELLVYLDKSPQFRNIEGAVLIFLPGLAHIQQLYDLLSSDRRFYS 894
>UNIPROTKB|E1B9N7 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 OMA:WLLYQEK GeneTree:ENSGT00550000074257
EMBL:DAAA02050346 IPI:IPI00907457 Ensembl:ENSBTAT00000013897
ArrayExpress:E1B9N7 Uniprot:E1B9N7
Length = 1367
Score = 274 (101.5 bits), Expect = 1.3e-29, Sum P(3) = 1.3e-29
Identities = 55/115 (47%), Positives = 78/115 (67%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+L+FLPG I L+ + F S R+++I LHS+L T Q + F PP+GVRKIVLA
Sbjct: 867 VLIFLPGLAHIQQLYDLLSTDRRFFSERYKVIALHSILSTQDQAAAFTLPPQGVRKIVLA 926
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAET ITI D+V+V+D G+TK + + +++L ++S A+A QR+GRAGR
Sbjct: 927 TNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGR 981
Score = 117 (46.2 bits), Expect = 1.3e-29, Sum P(3) = 1.3e-29
Identities = 23/63 (36%), Positives = 44/63 (69%)
Query: 23 LLNDPVLDAAFKKEMIRKLQSR-RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGET 81
L ++ V D + + RKLQS +YQ +L+ R++LP ++ R +V++ ++ +++ V++GET
Sbjct: 535 LESEKVEDLEPVRNLFRKLQSTPKYQRLLKERQQLPVFKHRSSVVETLKRHRVVVVAGET 594
Query: 82 GSG 84
GSG
Sbjct: 595 GSG 597
Score = 58 (25.5 bits), Expect = 1.3e-29, Sum P(3) = 1.3e-29
Identities = 13/40 (32%), Positives = 22/40 (55%)
Query: 389 KEIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHP 428
+ +I+V + F+ A I K+LR +D +L KL +P
Sbjct: 1305 ERLISVDGWIYFQAPVKIAVIFKQLRVLIDSVLRKKLENP 1344
Score = 56 (24.8 bits), Expect = 1.5e-05, Sum P(3) = 1.5e-05
Identities = 14/40 (35%), Positives = 23/40 (57%)
Query: 329 VNNDVIFSLLQHICTTQR----PGAILVFLPGWDTINSLH 364
+N D+I LL ++ + + GA+L+FLPG I L+
Sbjct: 842 INLDLILELLTYLDRSPQFKNVEGAVLIFLPGLAHIQQLY 881
Score = 41 (19.5 bits), Expect = 8.9e-22, Sum P(3) = 8.9e-22
Identities = 13/54 (24%), Positives = 26/54 (48%)
Query: 21 QKLLNDPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQI 74
+K ++ P AA R Q + +LE +++L Q + + +V NN++
Sbjct: 39 KKPVSRPAPAAAASTREPRVKQVPKIYSLLEIKEELGKVQTSKSSIHVVINNKL 92
Score = 40 (19.1 bits), Expect = 1.1e-21, Sum P(3) = 1.1e-21
Identities = 10/35 (28%), Positives = 20/35 (57%)
Query: 30 DAAFKKEMIRKLQSRRYQEMLEAR--KKLPSYQMR 62
DA KKE + K+++ + +++ A+ KL Q +
Sbjct: 468 DAEKKKEELNKMETNKPRDLFIAKLLNKLKQQQQQ 502
>UNIPROTKB|Q7Z478 [details] [associations]
symbol:DHX29 "ATP-dependent RNA helicase DHX29"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005739
GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AY036974 EMBL:BC056219 EMBL:AL834496
EMBL:BX648101 EMBL:BX648269 EMBL:AL079292 EMBL:AF070639
IPI:IPI00217413 RefSeq:NP_061903.2 UniGene:Hs.740463
ProteinModelPortal:Q7Z478 SMR:Q7Z478 IntAct:Q7Z478
MINT:MINT-1376685 STRING:Q7Z478 PhosphoSite:Q7Z478 DMDM:110278938
PaxDb:Q7Z478 PeptideAtlas:Q7Z478 PRIDE:Q7Z478
Ensembl:ENST00000251636 GeneID:54505 KEGG:hsa:54505 UCSC:uc003jpx.3
CTD:54505 GeneCards:GC05M054552 H-InvDB:HIX0004866 HGNC:HGNC:15815
HPA:HPA038317 HPA:HPA038318 MIM:612720 neXtProt:NX_Q7Z478
PharmGKB:PA27215 HOGENOM:HOG000247063 HOVERGEN:HBG081436
InParanoid:Q7Z478 OMA:WLLYQEK OrthoDB:EOG43FGW2 PhylomeDB:Q7Z478
ChiTaRS:DHX29 GenomeRNAi:54505 NextBio:56869 Bgee:Q7Z478
CleanEx:HS_DHX29 Genevestigator:Q7Z478 GermOnline:ENSG00000067248
Uniprot:Q7Z478
Length = 1369
Score = 273 (101.2 bits), Expect = 1.3e-29, Sum P(3) = 1.3e-29
Identities = 55/115 (47%), Positives = 77/115 (66%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+L+FLPG I L+ + F S R+++I LHS+L T Q + F PP GVRKIVLA
Sbjct: 870 VLIFLPGLAHIQQLYDLLSNDRRFYSERYKVIALHSILSTQDQAAAFTLPPPGVRKIVLA 929
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAET ITI D+V+V+D G+TK + + +++L ++S A+A QR+GRAGR
Sbjct: 930 TNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGR 984
Score = 121 (47.7 bits), Expect = 1.3e-29, Sum P(3) = 1.3e-29
Identities = 20/51 (39%), Positives = 41/51 (80%)
Query: 35 KEMIRKLQSR-RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+ + RKLQS +YQ++L+ R++LP ++ RD++++ ++ +++ V++GETGSG
Sbjct: 550 RNLFRKLQSTPKYQKLLKERQQLPVFKHRDSIVETLKRHRVVVVAGETGSG 600
Score = 57 (25.1 bits), Expect = 9.2e-06, Sum P(3) = 9.2e-06
Identities = 16/51 (31%), Positives = 26/51 (50%)
Query: 329 VNNDVIFSLLQHICTTQR----PGAILVFLPGWDTINSLHRSMCQSSFFNS 375
+N D+I LL ++ + + GA+L+FLPG I L+ + F S
Sbjct: 845 INLDLILELLAYLDKSPQFRNIEGAVLIFLPGLAHIQQLYDLLSNDRRFYS 895
Score = 55 (24.4 bits), Expect = 1.3e-29, Sum P(3) = 1.3e-29
Identities = 11/40 (27%), Positives = 22/40 (55%)
Query: 389 KEIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHP 428
+ ++++ + F+ A I K+LR +D +L KL +P
Sbjct: 1308 ERLLSIDGWIYFQAPVKIAVIFKQLRVLIDSVLRKKLENP 1347
Score = 37 (18.1 bits), Expect = 6.2e-21, Sum P(3) = 6.2e-21
Identities = 9/35 (25%), Positives = 20/35 (57%)
Query: 30 DAAFKKEMIRKLQSRRYQEMLEAR--KKLPSYQMR 62
DA K+E + K+++ + +++ A+ KL Q +
Sbjct: 471 DAEKKREELNKMETNKPRDLFIAKLLNKLKQQQQQ 505
>RGD|1308888 [details] [associations]
symbol:Dhx30 "DEAH (Asp-Glu-Ala-His) box polypeptide 30"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA;ISO;ISS] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0042645
"mitochondrial nucleoid" evidence=IEA;ISO;ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1308888 GO:GO:0005524 GO:GO:0003682 GO:GO:0003723 GO:GO:0042645
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:22907
HOGENOM:HOG000112212 HOVERGEN:HBG081437 KO:K13185 OrthoDB:EOG4VHK5M
EMBL:BC091359 IPI:IPI00949701 RefSeq:NP_001013267.1
UniGene:Rn.163034 ProteinModelPortal:Q5BJS0 SMR:Q5BJS0
PhosphoSite:Q5BJS0 PRIDE:Q5BJS0 Ensembl:ENSRNOT00000064600
GeneID:367172 KEGG:rno:367172 UCSC:RGD:1308888 NextBio:690809
ArrayExpress:Q5BJS0 Genevestigator:Q5BJS0
GermOnline:ENSRNOG00000029194 Uniprot:Q5BJS0
Length = 1194
Score = 313 (115.2 bits), Expect = 1.7e-29, Sum P(3) = 1.7e-29
Identities = 60/115 (52%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 671 ILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPLGVRKIVLA 730
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSIT++DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 731 TNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 785
Score = 79 (32.9 bits), Expect = 1.7e-29, Sum P(3) = 1.7e-29
Identities = 24/86 (27%), Positives = 41/86 (47%)
Query: 24 LNDPVLDAAF----KKEMIRKLQS-----RRYQEMLEARKKLPSYQMRDAVLDMVRNNQI 74
L+DP+ + + E +R QS RR + + +LP RD +L + + +
Sbjct: 393 LSDPITGKPYMPLSEAEEVRLSQSLLELWRRRGPIWQEAPQLPVDPHRDTILSAIEQHPV 452
Query: 75 TVISGETGSGPPLHLDFITLKRSETQ 100
VISG+TG G + + L+R T+
Sbjct: 453 VVISGDTGCGKTTRIPQLLLERYVTE 478
Score = 40 (19.1 bits), Expect = 1.7e-29, Sum P(3) = 1.7e-29
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 396 DCLSFECKPSTAKIIKELRARLDMLLAHKL 425
D L E T ++++ELR L ++ L
Sbjct: 1124 DLLRLEGDSRTVRLLRELRRALGRMVERSL 1153
>UNIPROTKB|Q5BJS0 [details] [associations]
symbol:Dhx30 "Putative ATP-dependent RNA helicase DHX30"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 RGD:1308888 GO:GO:0005524 GO:GO:0003682
GO:GO:0003723 GO:GO:0042645 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OrthoDB:EOG4VHK5M EMBL:BC091359 IPI:IPI00949701
RefSeq:NP_001013267.1 UniGene:Rn.163034 ProteinModelPortal:Q5BJS0
SMR:Q5BJS0 PhosphoSite:Q5BJS0 PRIDE:Q5BJS0
Ensembl:ENSRNOT00000064600 GeneID:367172 KEGG:rno:367172
UCSC:RGD:1308888 NextBio:690809 ArrayExpress:Q5BJS0
Genevestigator:Q5BJS0 GermOnline:ENSRNOG00000029194 Uniprot:Q5BJS0
Length = 1194
Score = 313 (115.2 bits), Expect = 1.7e-29, Sum P(3) = 1.7e-29
Identities = 60/115 (52%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 671 ILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPLGVRKIVLA 730
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSIT++DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 731 TNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 785
Score = 79 (32.9 bits), Expect = 1.7e-29, Sum P(3) = 1.7e-29
Identities = 24/86 (27%), Positives = 41/86 (47%)
Query: 24 LNDPVLDAAF----KKEMIRKLQS-----RRYQEMLEARKKLPSYQMRDAVLDMVRNNQI 74
L+DP+ + + E +R QS RR + + +LP RD +L + + +
Sbjct: 393 LSDPITGKPYMPLSEAEEVRLSQSLLELWRRRGPIWQEAPQLPVDPHRDTILSAIEQHPV 452
Query: 75 TVISGETGSGPPLHLDFITLKRSETQ 100
VISG+TG G + + L+R T+
Sbjct: 453 VVISGDTGCGKTTRIPQLLLERYVTE 478
Score = 40 (19.1 bits), Expect = 1.7e-29, Sum P(3) = 1.7e-29
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 396 DCLSFECKPSTAKIIKELRARLDMLLAHKL 425
D L E T ++++ELR L ++ L
Sbjct: 1124 DLLRLEGDSRTVRLLRELRRALGRMVERSL 1153
>TAIR|locus:2196255 [details] [associations]
symbol:AT1G58050 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AC079604
IPI:IPI00531251 PIR:F96613 RefSeq:NP_176102.1 UniGene:At.52250
ProteinModelPortal:Q9C6G0 SMR:Q9C6G0 PaxDb:Q9C6G0 PRIDE:Q9C6G0
EnsemblPlants:AT1G58050.1 GeneID:842172 KEGG:ath:AT1G58050
TAIR:At1g58050 HOGENOM:HOG000240812 InParanoid:Q9C6G0 OMA:ISPENED
PhylomeDB:Q9C6G0 ProtClustDB:CLSN2679369 Genevestigator:Q9C6G0
Uniprot:Q9C6G0
Length = 1417
Score = 294 (108.6 bits), Expect = 1.9e-29, Sum P(4) = 1.9e-29
Identities = 65/150 (43%), Positives = 92/150 (61%)
Query: 189 ILVFLPGWDTINSLHRSMCQS-SFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFLPG IN L + S F +S ++PLHS + + QK +F PP+G+RK+++
Sbjct: 885 ILVFLPGMSEINMLLNRLAASYRFRGASGDWLLPLHSSIASTEQKKVFLRPPKGIRKVII 944
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR---- 303
ATNIAETSITI+D+VYV+D GK K + ++ ++++ +W+S ANA+QR GRAGR
Sbjct: 945 ATNIAETSITIEDVVYVIDSGKHKENRYNPHKKLSSMVEDWVSKANARQRMGRAGRVKPG 1004
Query: 304 ------TLKRSETQQYPNDVLNMLKDPELE 327
T R E P V ML+ P +E
Sbjct: 1005 HCFSLYTRHRFEKLMRPYQVPEMLRVPLVE 1034
Score = 93 (37.8 bits), Expect = 1.9e-29, Sum P(4) = 1.9e-29
Identities = 16/54 (29%), Positives = 34/54 (62%)
Query: 31 AAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
++ K++ K + ++Y++ML+ R LP +++ +L ++ + V+ GETGSG
Sbjct: 572 SSLKQKQENKKKMQKYKDMLKTRAALPISEVKKDILQKLKEKDVLVVCGETGSG 625
Score = 79 (32.9 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 20/45 (44%), Positives = 25/45 (55%)
Query: 329 VNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFF 373
V+ D++ L+ HI T GAILVFLPG IN L + S F
Sbjct: 864 VDYDLLEELICHIDDTCEEGAILVFLPGMSEINMLLNRLAASYRF 908
Score = 46 (21.3 bits), Expect = 1.9e-29, Sum P(4) = 1.9e-29
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 118 VNNDVIFSLLQHICTTQRPGAILVY 142
V+ D++ L+ HI T GAILV+
Sbjct: 864 VDYDLLEELICHIDDTCEEGAILVF 888
Score = 46 (21.3 bits), Expect = 1.9e-29, Sum P(4) = 1.9e-29
Identities = 21/80 (26%), Positives = 34/80 (42%)
Query: 351 LVFLPGWDT--INSLHRSMCQSSFFNSCLLYEFAMVDNKPKEIITVRDCLSFECKPSTAK 408
+VFL +T + L + S F S LL+ ++ + +T+ L TA
Sbjct: 1313 IVFLEKLETKKVVYLQDTTVVSPF--SILLFGGSINVHHQSGSVTIDGWLKLTAPAQTAV 1370
Query: 409 IIKELRARLDMLLAHKLSHP 428
+ KELR L +L + P
Sbjct: 1371 LFKELRLTLHSILKDLIRKP 1390
Score = 37 (18.1 bits), Expect = 1.6e-28, Sum P(4) = 1.6e-28
Identities = 6/13 (46%), Positives = 9/13 (69%)
Query: 366 SMCQSSFFNSCLL 378
S C+S F NS ++
Sbjct: 1188 SFCESKFLNSSVM 1200
>UNIPROTKB|D4A1V3 [details] [associations]
symbol:Dhx30 "Putative ATP-dependent RNA helicase DHX30"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1308888 GO:GO:0005524 GO:GO:0003682 GO:GO:0003676 GO:GO:0042645
EMBL:CH473954 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 OMA:LHKEERY
UniGene:Rn.163034 IPI:IPI00203041 Ensembl:ENSRNOT00000045878
Uniprot:D4A1V3
Length = 1222
Score = 313 (115.2 bits), Expect = 1.9e-29, Sum P(3) = 1.9e-29
Identities = 60/115 (52%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 699 ILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPLGVRKIVLA 758
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSIT++DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 759 TNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 813
Score = 79 (32.9 bits), Expect = 1.9e-29, Sum P(3) = 1.9e-29
Identities = 24/86 (27%), Positives = 41/86 (47%)
Query: 24 LNDPVLDAAF----KKEMIRKLQS-----RRYQEMLEARKKLPSYQMRDAVLDMVRNNQI 74
L+DP+ + + E +R QS RR + + +LP RD +L + + +
Sbjct: 421 LSDPITGKPYMPLSEAEEVRLSQSLLELWRRRGPIWQEAPQLPVDPHRDTILSAIEQHPV 480
Query: 75 TVISGETGSGPPLHLDFITLKRSETQ 100
VISG+TG G + + L+R T+
Sbjct: 481 VVISGDTGCGKTTRIPQLLLERYVTE 506
Score = 40 (19.1 bits), Expect = 1.9e-29, Sum P(3) = 1.9e-29
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 396 DCLSFECKPSTAKIIKELRARLDMLLAHKL 425
D L E T ++++ELR L ++ L
Sbjct: 1152 DLLRLEGDSRTVRLLRELRRALGRMVERSL 1181
>UNIPROTKB|Q5R607 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9601 "Pongo abelii" [GO:0003682 "chromatin binding"
evidence=ISS] [GO:0042645 "mitochondrial nucleoid" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0003723
GO:GO:0042645 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:22907
HOVERGEN:HBG081437 KO:K13185 EMBL:CR858337 EMBL:CR860693
RefSeq:NP_001125306.1 UniGene:Pab.19257 ProteinModelPortal:Q5R607
SMR:Q5R607 PRIDE:Q5R607 GeneID:100172205 KEGG:pon:100172205
InParanoid:Q5R607 Uniprot:Q5R607
Length = 1194
Score = 310 (114.2 bits), Expect = 2.0e-29, Sum P(3) = 2.0e-29
Identities = 60/115 (52%), Positives = 81/115 (70%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 671 ILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLA 730
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETS TI+DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 731 TNIAETSTTINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 785
Score = 80 (33.2 bits), Expect = 2.0e-29, Sum P(3) = 2.0e-29
Identities = 24/86 (27%), Positives = 42/86 (48%)
Query: 24 LNDPVLDAAF----KKEMIRKLQS-----RRYQEMLEARKKLPSYQMRDAVLDMVRNNQI 74
L+DP+ + + E +R QS RR + + +LP RD +L+ + + +
Sbjct: 393 LSDPITGKPYVPLLEAEEVRLSQSLLELWRRRGPVWQEAPQLPVDPHRDTILNAIEQHPV 452
Query: 75 TVISGETGSGPPLHLDFITLKRSETQ 100
VISG+TG G + + L+R T+
Sbjct: 453 VVISGDTGCGKTTRIPQLLLERYVTE 478
Score = 43 (20.2 bits), Expect = 2.0e-29, Sum P(3) = 2.0e-29
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 396 DCLSFECKPSTAKIIKELRARLDMLLAHKL 425
D L E T +++KELR L ++ L
Sbjct: 1124 DLLRLEGDSRTVRLLKELRRALGRMVERSL 1153
>UNIPROTKB|F1SLN0 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 EMBL:CU929534
Ensembl:ENSSSCT00000018413 Uniprot:F1SLN0
Length = 1367
Score = 274 (101.5 bits), Expect = 2.4e-29, Sum P(4) = 2.4e-29
Identities = 55/115 (47%), Positives = 78/115 (67%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+L+FLPG I L+ + F S R+++I LHS+L T Q + F PP+GVRKIVLA
Sbjct: 870 VLIFLPGLAHIQQLYDLLSTDRRFFSERYKVIALHSILSTQDQAAAFTLPPQGVRKIVLA 929
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAET ITI D+V+V+D G+TK + + +++L ++S A+A QR+GRAGR
Sbjct: 930 TNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGR 984
Score = 115 (45.5 bits), Expect = 2.4e-29, Sum P(4) = 2.4e-29
Identities = 19/51 (37%), Positives = 40/51 (78%)
Query: 35 KEMIRKLQSR-RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+ + RKLQS +YQ +L+ R++LP ++ R+++++ ++ +++ V++GETGSG
Sbjct: 547 RNLFRKLQSTPKYQRLLKERQQLPVFKHRNSIVETLKRHRVVVVAGETGSG 597
Score = 63 (27.2 bits), Expect = 8.1e-06, Sum P(3) = 8.1e-06
Identities = 20/61 (32%), Positives = 30/61 (49%)
Query: 311 QQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQR-P------GAILVFLPGWDTINSL 363
Q+Y N + + +N D+I LL ++ T R P GA+L+FLPG I L
Sbjct: 824 QKYSNRTQHAILYMNPHKINLDLILELLTYLEITDRSPQFKNVEGAVLIFLPGLAHIQQL 883
Query: 364 H 364
+
Sbjct: 884 Y 884
Score = 56 (24.8 bits), Expect = 2.4e-29, Sum P(4) = 2.4e-29
Identities = 12/40 (30%), Positives = 22/40 (55%)
Query: 389 KEIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHP 428
+ +++V + F+ A I K+LR +D +L KL +P
Sbjct: 1305 ERLLSVDGWIYFQAPVKIAVIFKQLRVLIDSVLRKKLENP 1344
Score = 40 (19.1 bits), Expect = 1.1e-21, Sum P(4) = 1.1e-21
Identities = 10/35 (28%), Positives = 20/35 (57%)
Query: 30 DAAFKKEMIRKLQSRRYQEMLEAR--KKLPSYQMR 62
DA KKE + K+++ + +++ A+ KL Q +
Sbjct: 468 DAEKKKEELNKMETNKPRDLFIAKLLNKLKQQQQQ 502
Score = 39 (18.8 bits), Expect = 2.4e-29, Sum P(4) = 2.4e-29
Identities = 14/50 (28%), Positives = 24/50 (48%)
Query: 100 QQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQR-P------GAILVY 142
Q+Y N + + +N D+I LL ++ T R P GA+L++
Sbjct: 824 QKYSNRTQHAILYMNPHKINLDLILELLTYLEITDRSPQFKNVEGAVLIF 873
>UNIPROTKB|I3LG95 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 EMBL:CU929534
Ensembl:ENSSSCT00000030291 Uniprot:I3LG95
Length = 1370
Score = 274 (101.5 bits), Expect = 2.4e-29, Sum P(4) = 2.4e-29
Identities = 55/115 (47%), Positives = 78/115 (67%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+L+FLPG I L+ + F S R+++I LHS+L T Q + F PP+GVRKIVLA
Sbjct: 870 VLIFLPGLAHIQQLYDLLSTDRRFFSERYKVIALHSILSTQDQAAAFTLPPQGVRKIVLA 929
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAET ITI D+V+V+D G+TK + + +++L ++S A+A QR+GRAGR
Sbjct: 930 TNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGR 984
Score = 115 (45.5 bits), Expect = 2.4e-29, Sum P(4) = 2.4e-29
Identities = 19/51 (37%), Positives = 40/51 (78%)
Query: 35 KEMIRKLQSR-RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+ + RKLQS +YQ +L+ R++LP ++ R+++++ ++ +++ V++GETGSG
Sbjct: 547 RNLFRKLQSTPKYQRLLKERQQLPVFKHRNSIVETLKRHRVVVVAGETGSG 597
Score = 63 (27.2 bits), Expect = 8.1e-06, Sum P(3) = 8.1e-06
Identities = 20/61 (32%), Positives = 30/61 (49%)
Query: 311 QQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQR-P------GAILVFLPGWDTINSL 363
Q+Y N + + +N D+I LL ++ T R P GA+L+FLPG I L
Sbjct: 824 QKYSNRTQHAILYMNPHKINLDLILELLTYLEITDRSPQFKNVEGAVLIFLPGLAHIQQL 883
Query: 364 H 364
+
Sbjct: 884 Y 884
Score = 56 (24.8 bits), Expect = 2.4e-29, Sum P(4) = 2.4e-29
Identities = 12/40 (30%), Positives = 22/40 (55%)
Query: 389 KEIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHP 428
+ +++V + F+ A I K+LR +D +L KL +P
Sbjct: 1308 ERLLSVDGWIYFQAPVKIAVIFKQLRVLIDSVLRKKLENP 1347
Score = 40 (19.1 bits), Expect = 1.1e-21, Sum P(4) = 1.1e-21
Identities = 10/35 (28%), Positives = 20/35 (57%)
Query: 30 DAAFKKEMIRKLQSRRYQEMLEAR--KKLPSYQMR 62
DA KKE + K+++ + +++ A+ KL Q +
Sbjct: 468 DAEKKKEELNKMETNKPRDLFIAKLLNKLKQQQQQ 502
Score = 39 (18.8 bits), Expect = 2.4e-29, Sum P(4) = 2.4e-29
Identities = 14/50 (28%), Positives = 24/50 (48%)
Query: 100 QQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQR-P------GAILVY 142
Q+Y N + + +N D+I LL ++ T R P GA+L++
Sbjct: 824 QKYSNRTQHAILYMNPHKINLDLILELLTYLEITDRSPQFKNVEGAVLIF 873
>UNIPROTKB|I3LQ47 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 OMA:WLLYQEK GeneTree:ENSGT00550000074257
EMBL:CU929534 Ensembl:ENSSSCT00000025611 Uniprot:I3LQ47
Length = 1370
Score = 274 (101.5 bits), Expect = 2.4e-29, Sum P(4) = 2.4e-29
Identities = 55/115 (47%), Positives = 78/115 (67%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+L+FLPG I L+ + F S R+++I LHS+L T Q + F PP+GVRKIVLA
Sbjct: 870 VLIFLPGLAHIQQLYDLLSTDRRFFSERYKVIALHSILSTQDQAAAFTLPPQGVRKIVLA 929
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAET ITI D+V+V+D G+TK + + +++L ++S A+A QR+GRAGR
Sbjct: 930 TNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGR 984
Score = 115 (45.5 bits), Expect = 2.4e-29, Sum P(4) = 2.4e-29
Identities = 19/51 (37%), Positives = 40/51 (78%)
Query: 35 KEMIRKLQSR-RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+ + RKLQS +YQ +L+ R++LP ++ R+++++ ++ +++ V++GETGSG
Sbjct: 547 RNLFRKLQSTPKYQRLLKERQQLPVFKHRNSIVETLKRHRVVVVAGETGSG 597
Score = 63 (27.2 bits), Expect = 8.1e-06, Sum P(3) = 8.1e-06
Identities = 20/61 (32%), Positives = 30/61 (49%)
Query: 311 QQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQR-P------GAILVFLPGWDTINSL 363
Q+Y N + + +N D+I LL ++ T R P GA+L+FLPG I L
Sbjct: 824 QKYSNRTQHAILYMNPHKINLDLILELLTYLEITDRSPQFKNVEGAVLIFLPGLAHIQQL 883
Query: 364 H 364
+
Sbjct: 884 Y 884
Score = 56 (24.8 bits), Expect = 2.4e-29, Sum P(4) = 2.4e-29
Identities = 12/40 (30%), Positives = 22/40 (55%)
Query: 389 KEIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHP 428
+ +++V + F+ A I K+LR +D +L KL +P
Sbjct: 1308 ERLLSVDGWIYFQAPVKIAVIFKQLRVLIDSVLRKKLENP 1347
Score = 40 (19.1 bits), Expect = 1.1e-21, Sum P(4) = 1.1e-21
Identities = 10/35 (28%), Positives = 20/35 (57%)
Query: 30 DAAFKKEMIRKLQSRRYQEMLEAR--KKLPSYQMR 62
DA KKE + K+++ + +++ A+ KL Q +
Sbjct: 468 DAEKKKEELNKMETNKPRDLFIAKLLNKLKQQQQQ 502
Score = 39 (18.8 bits), Expect = 2.4e-29, Sum P(4) = 2.4e-29
Identities = 14/50 (28%), Positives = 24/50 (48%)
Query: 100 QQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQR-P------GAILVY 142
Q+Y N + + +N D+I LL ++ T R P GA+L++
Sbjct: 824 QKYSNRTQHAILYMNPHKINLDLILELLTYLEITDRSPQFKNVEGAVLIF 873
>UNIPROTKB|F1N0J0 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9913 "Bos taurus" [GO:0042645 "mitochondrial nucleoid"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0003676
GO:GO:0042645 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 IPI:IPI00717186 UniGene:Bt.24588 OMA:LHKEERY
EMBL:DAAA02054438 Ensembl:ENSBTAT00000030623 Uniprot:F1N0J0
Length = 1220
Score = 314 (115.6 bits), Expect = 2.8e-29, Sum P(3) = 2.8e-29
Identities = 61/115 (53%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 697 ILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPIGVRKIVLA 756
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 757 TNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 811
Score = 76 (31.8 bits), Expect = 2.8e-29, Sum P(3) = 2.8e-29
Identities = 23/86 (26%), Positives = 42/86 (48%)
Query: 24 LNDPVLDAAF----KKEMIRKLQS-----RRYQEMLEARKKLPSYQMRDAVLDMVRNNQI 74
L+DP+ + + E +R QS RR + + +LP RD +L+ + + +
Sbjct: 419 LSDPITGKPYVPLSEAEELRLSQSLLELWRRRGPVWQEAPQLPVDPHRDTILNAIEQHPV 478
Query: 75 TVISGETGSGPPLHLDFITLKRSETQ 100
VI+G+TG G + + L+R T+
Sbjct: 479 VVIAGDTGCGKTTRIPQLLLERYVTE 504
Score = 40 (19.1 bits), Expect = 2.8e-29, Sum P(3) = 2.8e-29
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 396 DCLSFECKPSTAKIIKELRARLDMLLAHKL 425
D L E T ++++ELR L ++ L
Sbjct: 1150 DLLRLEGDSRTVRLLRELRRALGRMVERSL 1179
>UNIPROTKB|Q2NKY8 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9913 "Bos taurus" [GO:0042645 "mitochondrial nucleoid"
evidence=ISS] [GO:0003682 "chromatin binding" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003682 GO:GO:0003723 GO:GO:0042645
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:BC111349
IPI:IPI00717186 RefSeq:NP_001070003.1 UniGene:Bt.24588
ProteinModelPortal:Q2NKY8 SMR:Q2NKY8 PRIDE:Q2NKY8 GeneID:767607
KEGG:bta:767607 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
InParanoid:Q2NKY8 KO:K13185 OrthoDB:EOG4VHK5M NextBio:20918019
Uniprot:Q2NKY8
Length = 1220
Score = 314 (115.6 bits), Expect = 2.8e-29, Sum P(3) = 2.8e-29
Identities = 61/115 (53%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 697 ILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPIGVRKIVLA 756
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 757 TNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 811
Score = 76 (31.8 bits), Expect = 2.8e-29, Sum P(3) = 2.8e-29
Identities = 23/86 (26%), Positives = 42/86 (48%)
Query: 24 LNDPVLDAAF----KKEMIRKLQS-----RRYQEMLEARKKLPSYQMRDAVLDMVRNNQI 74
L+DP+ + + E +R QS RR + + +LP RD +L+ + + +
Sbjct: 419 LSDPITGKPYVPLSEAEELRLSQSLLELWRRRGPVWQEAPQLPVDPHRDTILNAIEQHPV 478
Query: 75 TVISGETGSGPPLHLDFITLKRSETQ 100
VI+G+TG G + + L+R T+
Sbjct: 479 VVIAGDTGCGKTTRIPQLLLERYVTE 504
Score = 40 (19.1 bits), Expect = 2.8e-29, Sum P(3) = 2.8e-29
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 396 DCLSFECKPSTAKIIKELRARLDMLLAHKL 425
D L E T ++++ELR L ++ L
Sbjct: 1150 DLLRLEGDSRTVRLLRELRRALGRMVERSL 1179
>UNIPROTKB|Q5R874 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9601
"Pongo abelii" [GO:0030529 "ribonucleoprotein complex"
evidence=ISS] [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=ISS] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 GO:GO:0005524 GO:GO:0005813
GO:GO:0034605 GO:GO:0005730 GO:GO:0003677 Gene3D:3.30.160.20
GO:GO:0030529 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:1660 HOVERGEN:HBG039429 KO:K13184
OrthoDB:EOG4HHP1J GO:GO:0070937 OMA:DDWIRLQ GO:GO:0070934
EMBL:CR859880 RefSeq:XP_002809755.1 UniGene:Pab.8432
ProteinModelPortal:Q5R874 SMR:Q5R874 PRIDE:Q5R874
Ensembl:ENSPPYT00000000510 GeneID:100449914 KEGG:pon:100449914
InParanoid:Q5R874 Uniprot:Q5R874
Length = 1269
Score = 296 (109.3 bits), Expect = 3.4e-29, Sum P(4) = 3.4e-29
Identities = 57/121 (47%), Positives = 81/121 (66%)
Query: 185 LVVP--ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGV 242
L VP +LVFLPGW+ I ++ + + + F S R+QI+PLHS +P Q+ +F+ P GV
Sbjct: 647 LNVPGAVLVFLPGWNLIYTMQKHLEMNPHFGSHRYQILPLHSQIPREEQRKVFDPVPVGV 706
Query: 243 RKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAG 302
K++L+TNIAETSITI+D+VYV+D K K+ F +N+ W S N +QR+GRAG
Sbjct: 707 TKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAG 766
Query: 303 R 303
R
Sbjct: 767 R 767
Score = 92 (37.4 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 18/44 (40%), Positives = 30/44 (68%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
++I +LL++I T PGA+LVFLPGW+ I ++ + + + F S
Sbjct: 635 ELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHFGS 678
Score = 76 (31.8 bits), Expect = 3.4e-29, Sum P(4) = 3.4e-29
Identities = 16/52 (30%), Positives = 28/52 (53%)
Query: 34 KKEMIRKL-QSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
K E++ +L Q Q +L+ R+ LP + +L+ + N + +I G TG G
Sbjct: 365 KNELMYQLEQDHDLQAILQERELLPVKKFESEILEAISQNSVVIIRGATGCG 416
Score = 53 (23.7 bits), Expect = 3.4e-29, Sum P(4) = 3.4e-29
Identities = 15/61 (24%), Positives = 25/61 (40%)
Query: 390 EIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHPGTTAWGDPNEGNILHCCSGFS 449
+I+ V D + + A I LRA ++ L+ P + DP +L+ S
Sbjct: 1080 QIVLVDDWIKLQISHEAAACITGLRAAMEALVVEVTKQPAIISQLDPVNERMLNMIRQIS 1139
Query: 450 R 450
R
Sbjct: 1140 R 1140
Score = 48 (22.0 bits), Expect = 3.4e-29, Sum P(4) = 3.4e-29
Identities = 10/22 (45%), Positives = 17/22 (77%)
Query: 121 DVIFSLLQHICTTQRPGAILVY 142
++I +LL++I T PGA+LV+
Sbjct: 635 ELIEALLKYIETLNVPGAVLVF 656
>UNIPROTKB|Q08211 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9606
"Homo sapiens" [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IEA] [GO:0034605 "cellular response to heat" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005813
"centrosome" evidence=IDA] [GO:0070937 "CRD-mediated mRNA stability
complex" evidence=IDA] [GO:0070934 "CRD-mediated mRNA
stabilization" evidence=IMP] [GO:0030529 "ribonucleoprotein
complex" evidence=IDA] [GO:0003724 "RNA helicase activity"
evidence=TAS] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=TAS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0001085 "RNA polymerase II transcription factor binding"
evidence=IPI] Reactome:REACT_71 InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 GO:GO:0005813 GO:GO:0005654 GO:GO:0034605
GO:GO:0005730 GO:GO:0003677 Reactome:REACT_1675 Gene3D:3.30.160.20
EMBL:CH471067 GO:GO:0030529 GO:GO:0003725 GO:GO:0004003
GO:GO:0000398 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000247063 CTD:1660 HOVERGEN:HBG039429 KO:K13184
OrthoDB:EOG4HHP1J GO:GO:0070937 OMA:DDWIRLQ EMBL:L13848 EMBL:U03643
EMBL:Y10658 EMBL:AB451248 EMBL:AB451372 EMBL:AL355999 EMBL:AL662837
EMBL:BC025245 EMBL:BC058896 EMBL:BC107881 EMBL:BC137136
IPI:IPI00844578 RefSeq:NP_001348.2 UniGene:Hs.191518 PDB:3LLM
PDBsum:3LLM ProteinModelPortal:Q08211 SMR:Q08211 DIP:DIP-31504N
IntAct:Q08211 MINT:MINT-5000572 STRING:Q08211 PhosphoSite:Q08211
DMDM:116241330 SWISS-2DPAGE:Q08211 PaxDb:Q08211 PRIDE:Q08211
Ensembl:ENST00000367549 GeneID:1660 KEGG:hsa:1660 UCSC:uc001gpr.3
GeneCards:GC01P182808 H-InvDB:HIX0001404 H-InvDB:HIX0149309
HGNC:HGNC:2750 HPA:CAB011819 HPA:HPA028050 MIM:603115
neXtProt:NX_Q08211 PharmGKB:PA27232 InParanoid:Q08211
GenomeRNAi:1660 NextBio:6832 PMAP-CutDB:Q08211 ArrayExpress:Q08211
Bgee:Q08211 CleanEx:HS_DHX9 Genevestigator:Q08211
GermOnline:ENSG00000135829 GO:GO:0070934 Uniprot:Q08211
Length = 1270
Score = 296 (109.3 bits), Expect = 3.4e-29, Sum P(4) = 3.4e-29
Identities = 57/121 (47%), Positives = 81/121 (66%)
Query: 185 LVVP--ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGV 242
L VP +LVFLPGW+ I ++ + + + F S R+QI+PLHS +P Q+ +F+ P GV
Sbjct: 647 LNVPGAVLVFLPGWNLIYTMQKHLEMNPHFGSHRYQILPLHSQIPREEQRKVFDPVPVGV 706
Query: 243 RKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAG 302
K++L+TNIAETSITI+D+VYV+D K K+ F +N+ W S N +QR+GRAG
Sbjct: 707 TKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAG 766
Query: 303 R 303
R
Sbjct: 767 R 767
Score = 92 (37.4 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 18/44 (40%), Positives = 30/44 (68%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
++I +LL++I T PGA+LVFLPGW+ I ++ + + + F S
Sbjct: 635 ELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHFGS 678
Score = 76 (31.8 bits), Expect = 3.4e-29, Sum P(4) = 3.4e-29
Identities = 16/52 (30%), Positives = 28/52 (53%)
Query: 34 KKEMIRKL-QSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
K E++ +L Q Q +L+ R+ LP + +L+ + N + +I G TG G
Sbjct: 365 KNELMYQLEQDHDLQAILQERELLPVKKFESEILEAISQNSVVIIRGATGCG 416
Score = 53 (23.7 bits), Expect = 3.4e-29, Sum P(4) = 3.4e-29
Identities = 15/61 (24%), Positives = 25/61 (40%)
Query: 390 EIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHPGTTAWGDPNEGNILHCCSGFS 449
+I+ V D + + A I LRA ++ L+ P + DP +L+ S
Sbjct: 1080 QIVLVDDWIKLQISHEAAACITGLRAAMEALVVEVTKQPAIISQLDPVNERMLNMIRQIS 1139
Query: 450 R 450
R
Sbjct: 1140 R 1140
Score = 48 (22.0 bits), Expect = 3.4e-29, Sum P(4) = 3.4e-29
Identities = 10/22 (45%), Positives = 17/22 (77%)
Query: 121 DVIFSLLQHICTTQRPGAILVY 142
++I +LL++I T PGA+LV+
Sbjct: 635 ELIEALLKYIETLNVPGAVLVF 656
>UNIPROTKB|I3LHZ6 [details] [associations]
symbol:DHX9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00550000074257 OMA:DDWIRLQ
Ensembl:ENSSSCT00000025297 Uniprot:I3LHZ6
Length = 1274
Score = 294 (108.6 bits), Expect = 3.4e-29, Sum P(4) = 3.4e-29
Identities = 56/121 (46%), Positives = 81/121 (66%)
Query: 185 LVVP--ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGV 242
L VP +LVFLPGW+ I ++ + + + F + R+QI+PLHS +P Q+ +F+ P GV
Sbjct: 639 LNVPGAVLVFLPGWNLIYTMQKHLEMNPHFGNHRYQILPLHSQIPREEQRKVFDPVPAGV 698
Query: 243 RKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAG 302
K++L+TNIAETSITI+D+VYV+D K K+ F +N+ W S N +QR+GRAG
Sbjct: 699 TKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAG 758
Query: 303 R 303
R
Sbjct: 759 R 759
Score = 89 (36.4 bits), Expect = 0.00018, Sum P(3) = 0.00018
Identities = 17/44 (38%), Positives = 30/44 (68%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
++I +LL++I T PGA+LVFLPGW+ I ++ + + + F +
Sbjct: 627 ELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHFGN 670
Score = 80 (33.2 bits), Expect = 3.4e-29, Sum P(4) = 3.4e-29
Identities = 16/57 (28%), Positives = 30/57 (52%)
Query: 29 LDAAFKKEMIRKL-QSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+ K E++ +L Q R Q +L+ R+ LP + +L+ + N + ++ G TG G
Sbjct: 356 ISVEIKNELMYQLEQDRDLQAILQERELLPVKKFESEILEAISQNPVVIVRGATGCG 412
Score = 52 (23.4 bits), Expect = 3.4e-29, Sum P(4) = 3.4e-29
Identities = 15/61 (24%), Positives = 25/61 (40%)
Query: 390 EIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHPGTTAWGDPNEGNILHCCSGFS 449
+I+ V D + + A I LRA ++ L+ P + DP +L+ S
Sbjct: 1072 QIVLVDDWIRLQISHEAAACITALRAAMEALVVEVTKQPDIISQLDPVNERMLNTIRQIS 1131
Query: 450 R 450
R
Sbjct: 1132 R 1132
Score = 48 (22.0 bits), Expect = 3.4e-29, Sum P(4) = 3.4e-29
Identities = 10/22 (45%), Positives = 17/22 (77%)
Query: 121 DVIFSLLQHICTTQRPGAILVY 142
++I +LL++I T PGA+LV+
Sbjct: 627 ELIEALLKYIETLNVPGAVLVF 648
>MGI|MGI:2448561 [details] [associations]
symbol:Ythdc2 "YTH domain containing 2" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50088 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00248 SMART:SM00490 SMART:SM00847
MGI:MGI:2448561 GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146 PROSITE:PS50882
CTD:64848 HOGENOM:HOG000155703 OMA:RAFWESS OrthoDB:EOG4JWVCN
EMBL:BC138263 EMBL:BC171951 IPI:IPI00343249 RefSeq:NP_001156485.1
UniGene:Mm.244482 ProteinModelPortal:B2RR83 SMR:B2RR83
PhosphoSite:B2RR83 PaxDb:B2RR83 PRIDE:B2RR83
Ensembl:ENSMUST00000037763 GeneID:240255 KEGG:mmu:240255
UCSC:uc008evb.2 InParanoid:B2RR83 ChiTaRS:YTHDC2 NextBio:384522
Bgee:B2RR83 Genevestigator:B2RR83 Uniprot:B2RR83
Length = 1445
Score = 293 (108.2 bits), Expect = 3.6e-29, Sum P(4) = 3.6e-29
Identities = 60/118 (50%), Positives = 80/118 (67%)
Query: 189 ILVFLPGWDTINSLH-RSMCQSSFF--NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
IL+FLPG+D I L R + F N+ R+Q+ LHS + T QK + PP GVRKI
Sbjct: 640 ILIFLPGYDEIVGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKI 699
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+L+TNIAETSIT++D+V+V+D GK K +FD + + LK WIS A+A QR+GRAGR
Sbjct: 700 ILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGR 757
Score = 75 (31.5 bits), Expect = 3.6e-29, Sum P(4) = 3.6e-29
Identities = 11/32 (34%), Positives = 24/32 (75%)
Query: 53 RKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
R+ LP ++ ++ ++ +++ N++ +I GETGSG
Sbjct: 205 RQSLPVFEKQEEIVKIIKENKVVLIVGETGSG 236
Score = 56 (24.8 bits), Expect = 3.6e-29, Sum P(4) = 3.6e-29
Identities = 24/106 (22%), Positives = 45/106 (42%)
Query: 342 CTTQRPGAILVFL-PGWDTINSLHRSMCQSSFFNSCLLYEFA---MVDNKPKEIITVR-- 395
C+ P +LVF P N+L SSF + + + M D + ++
Sbjct: 1067 CSAVTPVTVLVFCGPARLASNALQEP---SSFRADGIPNDSSDSEMEDRTTANLAALKLD 1123
Query: 396 DCLSFECKPSTAKIIKELRARLDMLLAHKLSHPGTTAWGDPNEGNI 441
+ L+F+ +P A ++ +LR + L ++ P + W +E I
Sbjct: 1124 EWLNFKLEPEAASLLLQLRQKWHSLFLRRMRAP-SKPWSQVDEATI 1168
Score = 53 (23.7 bits), Expect = 3.6e-29, Sum P(4) = 3.6e-29
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 116 EGVNNDVIFSLLQHICTTQRPGAILVY 142
E V+ D+I LL +IC + GAIL++
Sbjct: 617 EKVDLDLIMHLLYNICHSCDAGAILIF 643
Score = 40 (19.1 bits), Expect = 1.4e-25, Sum P(4) = 1.4e-25
Identities = 15/66 (22%), Positives = 27/66 (40%)
Query: 35 KEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHLDFITL 94
K +R L R E + LP + + N +++ SG +G P + +
Sbjct: 139 KHAVRSLIQRFPVTNKERTELLPKTERGNVFAVEAENREMSKTSGRLNNGIPQ----VPV 194
Query: 95 KRSETQ 100
KR E++
Sbjct: 195 KRGESE 200
>UNIPROTKB|F1SLI4 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0042645 "mitochondrial nucleoid" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0003676
GO:GO:0042645 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:LHKEERY EMBL:CU633694 Ensembl:ENSSSCT00000012419
Uniprot:F1SLI4
Length = 1222
Score = 315 (115.9 bits), Expect = 4.1e-29, Sum P(3) = 4.1e-29
Identities = 61/115 (53%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 699 ILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLA 758
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSITI+DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 759 TNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 813
Score = 73 (30.8 bits), Expect = 4.1e-29, Sum P(3) = 4.1e-29
Identities = 16/57 (28%), Positives = 30/57 (52%)
Query: 44 RRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHLDFITLKRSETQ 100
RR + + +LP RD +L+ + + + VI+G+TG G + + L+R T+
Sbjct: 450 RRRGPVWQEAPQLPVDPHRDTILNAIEQHPVVVIAGDTGCGKTTRIPQLLLERYVTE 506
Score = 40 (19.1 bits), Expect = 4.1e-29, Sum P(3) = 4.1e-29
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 396 DCLSFECKPSTAKIIKELRARLDMLLAHKL 425
D L E T ++++ELR L ++ L
Sbjct: 1152 DLLRLEGDSRTVRLLRELRRALGRMVERSL 1181
>UNIPROTKB|J9P264 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AAEX03012236 Ensembl:ENSCAFT00000047330
Uniprot:J9P264
Length = 1219
Score = 314 (115.6 bits), Expect = 4.5e-29, Sum P(3) = 4.5e-29
Identities = 60/115 (52%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 702 ILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLA 761
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSIT++DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 762 TNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 816
Score = 74 (31.1 bits), Expect = 4.5e-29, Sum P(3) = 4.5e-29
Identities = 22/82 (26%), Positives = 40/82 (48%)
Query: 24 LNDPVLDAAF----KKEMIRKLQS-----RRYQEMLEARKKLPSYQMRDAVLDMVRNNQI 74
L+DP+ + + E +R Q+ RR + + +LP RD +L+ + + +
Sbjct: 421 LSDPITGKPYVPLSEAEEVRLSQNLLELWRRRGPVWQEAPQLPVDPHRDTILNAIEQHPV 480
Query: 75 TVISGETGSGPPLHLDFITLKR 96
VISG+TG G + + L+R
Sbjct: 481 VVISGDTGCGKTTRIPQLLLER 502
Score = 40 (19.1 bits), Expect = 4.5e-29, Sum P(3) = 4.5e-29
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 396 DCLSFECKPSTAKIIKELRARLDMLLAHKL 425
D L E T ++++ELR L ++ L
Sbjct: 1155 DLLRLEGDSRTVRLLRELRRALGRMVERSL 1184
>MGI|MGI:1920081 [details] [associations]
symbol:Dhx30 "DEAH (Asp-Glu-Ala-His) box polypeptide 30"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=ISO] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0042645 "mitochondrial
nucleoid" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 MGI:MGI:1920081 GO:GO:0005524
GO:GO:0003682 GO:GO:0003723 GO:GO:0042645 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OMA:LHKEERY EMBL:AB047557 EMBL:AK146326 EMBL:AK148778
EMBL:AK153969 EMBL:BC004082 EMBL:BC016202 IPI:IPI00127902
IPI:IPI00270064 IPI:IPI00761204 RefSeq:NP_001239611.1
RefSeq:NP_001239612.1 RefSeq:NP_579925.1 UniGene:Mm.276305
ProteinModelPortal:Q99PU8 SMR:Q99PU8 PhosphoSite:Q99PU8
PaxDb:Q99PU8 PRIDE:Q99PU8 Ensembl:ENSMUST00000035056
Ensembl:ENSMUST00000062368 Ensembl:ENSMUST00000111991
Ensembl:ENSMUST00000136969 Ensembl:ENSMUST00000142911
Ensembl:ENSMUST00000148287 Ensembl:ENSMUST00000165596 GeneID:72831
KEGG:mmu:72831 UCSC:uc009rtg.1 UCSC:uc009rth.1 UCSC:uc009rti.1
ChiTaRS:DHX30 NextBio:337009 Bgee:Q99PU8 CleanEx:MM_DHX30
Genevestigator:Q99PU8 GermOnline:ENSMUSG00000032480 Uniprot:Q99PU8
Length = 1217
Score = 313 (115.2 bits), Expect = 4.5e-29, Sum P(2) = 4.5e-29
Identities = 60/115 (52%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 694 ILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPLGVRKIVLA 753
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSIT++DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 754 TNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 808
Score = 79 (32.9 bits), Expect = 4.5e-29, Sum P(2) = 4.5e-29
Identities = 24/86 (27%), Positives = 41/86 (47%)
Query: 24 LNDPVLDAAF----KKEMIRKLQS-----RRYQEMLEARKKLPSYQMRDAVLDMVRNNQI 74
L+DP+ + + E +R QS RR + + +LP RD +L + + +
Sbjct: 416 LSDPITGKPYMPLSEAEEVRLSQSLLELWRRRGPIWQEAPQLPVDPHRDTILSAIEQHPV 475
Query: 75 TVISGETGSGPPLHLDFITLKRSETQ 100
VISG+TG G + + L+R T+
Sbjct: 476 VVISGDTGCGKTTRIPQLLLERYVTE 501
>UNIPROTKB|E2RL62 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:LHKEERY EMBL:AAEX03012236
Ensembl:ENSCAFT00000020710 NextBio:20852259 Uniprot:E2RL62
Length = 1222
Score = 314 (115.6 bits), Expect = 4.5e-29, Sum P(3) = 4.5e-29
Identities = 60/115 (52%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 699 ILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLA 758
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSIT++DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 759 TNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 813
Score = 74 (31.1 bits), Expect = 4.5e-29, Sum P(3) = 4.5e-29
Identities = 22/82 (26%), Positives = 40/82 (48%)
Query: 24 LNDPVLDAAF----KKEMIRKLQS-----RRYQEMLEARKKLPSYQMRDAVLDMVRNNQI 74
L+DP+ + + E +R Q+ RR + + +LP RD +L+ + + +
Sbjct: 421 LSDPITGKPYVPLSEAEEVRLSQNLLELWRRRGPVWQEAPQLPVDPHRDTILNAIEQHPV 480
Query: 75 TVISGETGSGPPLHLDFITLKR 96
VISG+TG G + + L+R
Sbjct: 481 VVISGDTGCGKTTRIPQLLLER 502
Score = 40 (19.1 bits), Expect = 4.5e-29, Sum P(3) = 4.5e-29
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 396 DCLSFECKPSTAKIIKELRARLDMLLAHKL 425
D L E T ++++ELR L ++ L
Sbjct: 1152 DLLRLEGDSRTVRLLRELRRALGRMVERSL 1181
>MGI|MGI:2147067 [details] [associations]
symbol:Dhx57 "DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
MGI:MGI:2147067 GO:GO:0005524 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:90957 HOVERGEN:HBG080658 KO:K13026
OMA:RAYKGWQ OrthoDB:EOG4ZS929 EMBL:AK035344 EMBL:AK053628
EMBL:AK162192 EMBL:BC026474 EMBL:BC062952 EMBL:BC065169
EMBL:BC066091 IPI:IPI00420351 IPI:IPI00453609 IPI:IPI00752611
IPI:IPI00753147 IPI:IPI00755243 RefSeq:NP_001157231.1
RefSeq:NP_945180.2 UniGene:Mm.12412 ProteinModelPortal:Q6P5D3
SMR:Q6P5D3 PhosphoSite:Q6P5D3 PaxDb:Q6P5D3 PRIDE:Q6P5D3
Ensembl:ENSMUST00000038166 Ensembl:ENSMUST00000086555 GeneID:106794
KEGG:mmu:106794 UCSC:uc008dqx.2 UCSC:uc008dqy.2 UCSC:uc008dqz.2
UCSC:uc008dra.2 UCSC:uc008drb.1 InParanoid:Q6P5D3 NextBio:358388
Bgee:Q6P5D3 CleanEx:MM_DHX57 Genevestigator:Q6P5D3
GermOnline:ENSMUSG00000035051 Uniprot:Q6P5D3
Length = 1388
Score = 281 (104.0 bits), Expect = 6.3e-29, Sum P(3) = 6.3e-29
Identities = 59/118 (50%), Positives = 79/118 (66%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN---SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
+LVFLPG I L+ + +S FN S R I PLHS L + Q+++F PP GV KI
Sbjct: 852 VLVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVIHPLHSSLSSEEQQAVFVKPPMGVTKI 911
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+++TNIAETSITIDD+VYV+D GK K +D + +L+ ++S ANA QR+GRAGR
Sbjct: 912 IISTNIAETSITIDDVVYVIDSGKMKEKRYDAGKGMESLEDTFVSQANALQRKGRAGR 969
Score = 97 (39.2 bits), Expect = 6.3e-29, Sum P(3) = 6.3e-29
Identities = 22/71 (30%), Positives = 39/71 (54%)
Query: 40 KLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHLDFITLKRSET 99
K SR++ +L+ R+ LP+++ R+ +L ++ +Q+ VISG TG G + L S
Sbjct: 529 KQASRQFHAILQERQLLPAWEERETILKLLSKHQVVVISGMTGCGKTTQIPQFILDNSLN 588
Query: 100 QQYPNDVLNML 110
P V N++
Sbjct: 589 GP-PERVANII 598
Score = 87 (35.7 bits), Expect = 5.7e-07, Sum P(3) = 5.7e-07
Identities = 22/62 (35%), Positives = 35/62 (56%)
Query: 317 VLNMLKDPELEGVNNDVIFSLLQHICTTQR---PGAILVFLPGWDTINSLHRSMCQSSFF 373
V+ + + E VN ++I +LL+ I + PGA+LVFLPG I L+ + +S F
Sbjct: 816 VIKTMSVMDFEKVNLELIEALLEWIVDGKHAYPPGAVLVFLPGLAEIKMLYEQLQSNSLF 875
Query: 374 NS 375
N+
Sbjct: 876 NN 877
Score = 63 (27.2 bits), Expect = 6.3e-29, Sum P(3) = 6.3e-29
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 407 AKIIKELRARLDMLLAHKLSHPGTTAWGDPNEGNIL 442
A+++KELR LD LL K+ +P P I+
Sbjct: 1343 AELVKELRCELDQLLQDKIKNPSMDLCSCPRGSRII 1378
>UNIPROTKB|F1M8G5 [details] [associations]
symbol:Dhx57 "Protein Dhx57" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
RGD:1310340 NextBio:689608 IPI:IPI00391644
Ensembl:ENSRNOT00000037714 ArrayExpress:F1M8G5 Uniprot:F1M8G5
Length = 1338
Score = 281 (104.0 bits), Expect = 6.9e-29, Sum P(4) = 6.9e-29
Identities = 60/118 (50%), Positives = 79/118 (66%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN---SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVFLPG I L+ + +S FN S R I PLHS L + Q+++F PP GV KI
Sbjct: 802 ILVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVIHPLHSSLSSEEQQAVFVKPPLGVTKI 861
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+++TNIAETSITIDD+VYV+D GK K +D + +L+ ++S ANA QR+GRAGR
Sbjct: 862 IISTNIAETSITIDDVVYVIDSGKMKEKRYDAGKGMESLEDTFVSQANALQRKGRAGR 919
Score = 97 (39.2 bits), Expect = 6.9e-29, Sum P(4) = 6.9e-29
Identities = 22/71 (30%), Positives = 39/71 (54%)
Query: 40 KLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHLDFITLKRSET 99
K SR++ +L+ R+ LP+++ R+ +L ++ +Q+ VISG TG G + L S
Sbjct: 479 KQASRQFHAILQERQLLPAWEERETILKLLSKHQVVVISGMTGCGKTTQIPQFILDNSLN 538
Query: 100 QQYPNDVLNML 110
P V N++
Sbjct: 539 GP-PERVANII 548
Score = 88 (36.0 bits), Expect = 1.1e-06, Sum P(4) = 1.1e-06
Identities = 23/62 (37%), Positives = 35/62 (56%)
Query: 317 VLNMLKDPELEGVNNDVIFSLLQHICTTQR---PGAILVFLPGWDTINSLHRSMCQSSFF 373
V+ + + E VN ++I +LL+ I + PGAILVFLPG I L+ + +S F
Sbjct: 766 VIKTMSVMDFEKVNLELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLF 825
Query: 374 NS 375
N+
Sbjct: 826 NN 827
Score = 61 (26.5 bits), Expect = 6.9e-29, Sum P(4) = 6.9e-29
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 407 AKIIKELRARLDMLLAHKLSHPGTTAWGDPNEGNIL 442
A+++KELR LD LL K+ +P P I+
Sbjct: 1293 AELVKELRCELDQLLQDKIKNPSMDLCTCPRGSRII 1328
Score = 38 (18.4 bits), Expect = 6.9e-29, Sum P(4) = 6.9e-29
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 21 QKLLNDPVLDAAFKKEMIRKLQSR 44
++ +NDP LDA + +LQ R
Sbjct: 285 ERNVNDPHLDAENDTTFLYELQIR 308
>UNIPROTKB|E2RID8 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:54505
GeneTree:ENSGT00550000074257 EMBL:AAEX03001437 RefSeq:XP_535238.2
Ensembl:ENSCAFT00000010821 GeneID:478060 KEGG:cfa:478060
NextBio:20853441 Uniprot:E2RID8
Length = 1367
Score = 271 (100.5 bits), Expect = 7.8e-29, Sum P(3) = 7.8e-29
Identities = 55/115 (47%), Positives = 77/115 (66%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+L+FLPG I L+ + F S R+++I LHS+L T Q + F PP GVRKIVLA
Sbjct: 867 VLIFLPGLAHIQQLYDLLSTDRRFFSERYKVIALHSILSTQDQAAAFTLPPPGVRKIVLA 926
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAET ITI D+V+V+D G+TK + + +++L ++S A+A QR+GRAGR
Sbjct: 927 TNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGR 981
Score = 115 (45.5 bits), Expect = 7.8e-29, Sum P(3) = 7.8e-29
Identities = 19/51 (37%), Positives = 40/51 (78%)
Query: 35 KEMIRKLQSR-RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+ + RKLQS +YQ +L+ R++LP ++ R+++++ ++ +++ V++GETGSG
Sbjct: 547 RNLFRKLQSTPKYQRLLKERQQLPVFKHRNSIVETLKRHRVVVVAGETGSG 597
Score = 58 (25.5 bits), Expect = 2.5e-05, Sum P(3) = 2.5e-05
Identities = 17/58 (29%), Positives = 29/58 (50%)
Query: 311 QQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQR----PGAILVFLPGWDTINSLH 364
Q+Y N + + +N D+I LL ++ + + GA+L+FLPG I L+
Sbjct: 824 QKYSNRTQHAILYMNPHKINLDLILELLIYLDRSPQFRNIEGAVLIFLPGLAHIQQLY 881
Score = 56 (24.8 bits), Expect = 7.8e-29, Sum P(3) = 7.8e-29
Identities = 12/40 (30%), Positives = 22/40 (55%)
Query: 389 KEIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHP 428
+ +++V + F+ A I K+LR +D +L KL +P
Sbjct: 1305 ERLLSVDGWIYFQAPVKIAVIFKQLRVLIDSVLRKKLENP 1344
Score = 40 (19.1 bits), Expect = 4.3e-21, Sum P(3) = 4.3e-21
Identities = 10/35 (28%), Positives = 20/35 (57%)
Query: 30 DAAFKKEMIRKLQSRRYQEMLEAR--KKLPSYQMR 62
DA KKE + K+++ + +++ A+ KL Q +
Sbjct: 468 DAEKKKEELNKMETNKPRDLFIAKLLNKLKQQQQQ 502
>UNIPROTKB|J9P6V4 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 OMA:WLLYQEK
GeneTree:ENSGT00550000074257 EMBL:AAEX03001437
Ensembl:ENSCAFT00000043416 Uniprot:J9P6V4
Length = 1369
Score = 271 (100.5 bits), Expect = 7.9e-29, Sum P(3) = 7.9e-29
Identities = 55/115 (47%), Positives = 77/115 (66%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+L+FLPG I L+ + F S R+++I LHS+L T Q + F PP GVRKIVLA
Sbjct: 870 VLIFLPGLAHIQQLYDLLSTDRRFFSERYKVIALHSILSTQDQAAAFTLPPPGVRKIVLA 929
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAET ITI D+V+V+D G+TK + + +++L ++S A+A QR+GRAGR
Sbjct: 930 TNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGR 984
Score = 115 (45.5 bits), Expect = 7.9e-29, Sum P(3) = 7.9e-29
Identities = 19/51 (37%), Positives = 40/51 (78%)
Query: 35 KEMIRKLQSR-RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+ + RKLQS +YQ +L+ R++LP ++ R+++++ ++ +++ V++GETGSG
Sbjct: 547 RNLFRKLQSTPKYQRLLKERQQLPVFKHRNSIVETLKRHRVVVVAGETGSG 597
Score = 56 (24.8 bits), Expect = 7.9e-29, Sum P(3) = 7.9e-29
Identities = 12/40 (30%), Positives = 22/40 (55%)
Query: 389 KEIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHP 428
+ +++V + F+ A I K+LR +D +L KL +P
Sbjct: 1308 ERLLSVDGWIYFQAPVKIAVIFKQLRVLIDSVLRKKLENP 1347
Score = 55 (24.4 bits), Expect = 5.0e-05, Sum P(3) = 5.0e-05
Identities = 19/61 (31%), Positives = 29/61 (47%)
Query: 311 QQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQR-P------GAILVFLPGWDTINSL 363
Q+Y N + + +N D+I LL ++ R P GA+L+FLPG I L
Sbjct: 824 QKYSNRTQHAILYMNPHKINLDLILELLIYLEIPDRSPQFRNIEGAVLIFLPGLAHIQQL 883
Query: 364 H 364
+
Sbjct: 884 Y 884
Score = 40 (19.1 bits), Expect = 4.3e-21, Sum P(3) = 4.3e-21
Identities = 10/35 (28%), Positives = 20/35 (57%)
Query: 30 DAAFKKEMIRKLQSRRYQEMLEAR--KKLPSYQMR 62
DA KKE + K+++ + +++ A+ KL Q +
Sbjct: 468 DAEKKKEELNKMETNKPRDLFIAKLLNKLKQQQQQ 502
>UNIPROTKB|F1LSC4 [details] [associations]
symbol:Dhx57 "Protein Dhx57" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:90957 KO:K13026 OMA:RAYKGWQ
IPI:IPI00369334 RefSeq:NP_001178836.1 UniGene:Rn.15951
Ensembl:ENSRNOT00000037705 GeneID:366532 KEGG:rno:366532
RGD:1310340 NextBio:689608 ArrayExpress:F1LSC4 Uniprot:F1LSC4
Length = 1391
Score = 281 (104.0 bits), Expect = 8.6e-29, Sum P(4) = 8.6e-29
Identities = 60/118 (50%), Positives = 79/118 (66%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN---SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVFLPG I L+ + +S FN S R I PLHS L + Q+++F PP GV KI
Sbjct: 855 ILVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVIHPLHSSLSSEEQQAVFVKPPLGVTKI 914
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+++TNIAETSITIDD+VYV+D GK K +D + +L+ ++S ANA QR+GRAGR
Sbjct: 915 IISTNIAETSITIDDVVYVIDSGKMKEKRYDAGKGMESLEDTFVSQANALQRKGRAGR 972
Score = 97 (39.2 bits), Expect = 8.6e-29, Sum P(4) = 8.6e-29
Identities = 22/71 (30%), Positives = 39/71 (54%)
Query: 40 KLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHLDFITLKRSET 99
K SR++ +L+ R+ LP+++ R+ +L ++ +Q+ VISG TG G + L S
Sbjct: 532 KQASRQFHAILQERQLLPAWEERETILKLLSKHQVVVISGMTGCGKTTQIPQFILDNSLN 591
Query: 100 QQYPNDVLNML 110
P V N++
Sbjct: 592 GP-PERVANII 601
Score = 88 (36.0 bits), Expect = 1.3e-06, Sum P(4) = 1.3e-06
Identities = 23/62 (37%), Positives = 35/62 (56%)
Query: 317 VLNMLKDPELEGVNNDVIFSLLQHICTTQR---PGAILVFLPGWDTINSLHRSMCQSSFF 373
V+ + + E VN ++I +LL+ I + PGAILVFLPG I L+ + +S F
Sbjct: 819 VIKTMSVMDFEKVNLELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLF 878
Query: 374 NS 375
N+
Sbjct: 879 NN 880
Score = 61 (26.5 bits), Expect = 8.6e-29, Sum P(4) = 8.6e-29
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 407 AKIIKELRARLDMLLAHKLSHPGTTAWGDPNEGNIL 442
A+++KELR LD LL K+ +P P I+
Sbjct: 1346 AELVKELRCELDQLLQDKIKNPSMDLCTCPRGSRII 1381
Score = 38 (18.4 bits), Expect = 8.6e-29, Sum P(4) = 8.6e-29
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 21 QKLLNDPVLDAAFKKEMIRKLQSR 44
++ +NDP LDA + +LQ R
Sbjct: 338 ERNVNDPHLDAENDTTFLYELQIR 361
>UNIPROTKB|J9P3P6 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AAEX03012236 Ensembl:ENSCAFT00000047198
Uniprot:J9P3P6
Length = 1135
Score = 314 (115.6 bits), Expect = 8.9e-29, Sum P(2) = 8.9e-29
Identities = 60/115 (52%), Positives = 82/115 (71%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + ++ + S++ I+P+HS +P + QK+IF PP GVRKIVLA
Sbjct: 671 ILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLA 730
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAETSIT++DIV+VVD G K +D+K ++ L+ W+S AN QRRGRAGR
Sbjct: 731 TNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGR 785
Score = 74 (31.1 bits), Expect = 8.9e-29, Sum P(2) = 8.9e-29
Identities = 22/82 (26%), Positives = 40/82 (48%)
Query: 24 LNDPVLDAAF----KKEMIRKLQS-----RRYQEMLEARKKLPSYQMRDAVLDMVRNNQI 74
L+DP+ + + E +R Q+ RR + + +LP RD +L+ + + +
Sbjct: 393 LSDPITGKPYVPLSEAEEVRLSQNLLELWRRRGPVWQEAPQLPVDPHRDTILNAIEQHPV 452
Query: 75 TVISGETGSGPPLHLDFITLKR 96
VISG+TG G + + L+R
Sbjct: 453 VVISGDTGCGKTTRIPQLLLER 474
>UNIPROTKB|F1NS70 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 OMA:RAFWESS EMBL:AADN02056192 EMBL:AADN02056193
IPI:IPI00591470 Ensembl:ENSGALT00000000247 Uniprot:F1NS70
Length = 1339
Score = 300 (110.7 bits), Expect = 9.5e-29, Sum P(3) = 9.5e-29
Identities = 62/119 (52%), Positives = 84/119 (70%)
Query: 189 ILVFLPGWDTINSLH-RSMCQSSFF--NS-SRFQIIPLHSMLPTVSQKSIFNTPPEGVRK 244
IL+FLPG+D I SL R + F N+ S++Q+ LHS + T+ QK++ TPP G+RK
Sbjct: 535 ILIFLPGYDEIISLRDRIIFDDKRFVDNAHSKYQVFMLHSNMQTLDQKNVLKTPPSGIRK 594
Query: 245 IVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
I+L+TNIAETSIT++D+V+V+D GK K +FD + LK WIS A+A QRRGRAGR
Sbjct: 595 IILSTNIAETSITVNDVVFVIDSGKMKEKSFDALSCVTMLKTVWISKASAIQRRGRAGR 653
Score = 76 (31.8 bits), Expect = 9.5e-29, Sum P(3) = 9.5e-29
Identities = 11/32 (34%), Positives = 24/32 (75%)
Query: 53 RKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
R+ LP ++ ++ ++ +++ N++ +I GETGSG
Sbjct: 100 RQSLPVFEKKEEIVKIIKENKVVLIVGETGSG 131
Score = 57 (25.1 bits), Expect = 9.5e-29, Sum P(3) = 9.5e-29
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 116 EGVNNDVIFSLLQHICTTQRPGAILVY 142
E V+ D+I LL +IC + GAIL++
Sbjct: 512 EKVDLDLIMHLLYNICNSSDGGAILIF 538
Score = 46 (21.3 bits), Expect = 1.2e-25, Sum P(3) = 1.2e-25
Identities = 18/66 (27%), Positives = 27/66 (40%)
Query: 35 KEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHLDFITL 94
K+ + L R E + LP Q +A N ++ SG SG P + L
Sbjct: 34 KQTVHSLIHRFPLTNKERIELLPKTQRGNAFAVETENKEVGKTSGRLSSGIPQ----VPL 89
Query: 95 KRSETQ 100
KR E++
Sbjct: 90 KRGESE 95
>RGD|2318361 [details] [associations]
symbol:Dhx29 "DEAH (Asp-Glu-Ala-His) box polypeptide 29"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:2318361
GO:GO:0005739 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OrthoDB:EOG43FGW2 GeneTree:ENSGT00550000074257
IPI:IPI00372028 Ensembl:ENSRNOT00000013854 Uniprot:D3ZHW0
Length = 1366
Score = 274 (101.5 bits), Expect = 1.4e-28, Sum P(3) = 1.4e-28
Identities = 56/115 (48%), Positives = 77/115 (66%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+L+FLPG I L+ + F S R+Q+I LHS+L T Q + F PP GVRKIVLA
Sbjct: 870 VLIFLPGLAHIQQLYDLLSNDRRFYSERYQLIALHSVLSTQDQAAAFMLPPPGVRKIVLA 929
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAET ITI D+V+V+D G+TK + + +++L ++S A+A QR+GRAGR
Sbjct: 930 TNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGR 984
Score = 109 (43.4 bits), Expect = 1.4e-28, Sum P(3) = 1.4e-28
Identities = 18/51 (35%), Positives = 39/51 (76%)
Query: 35 KEMIRKLQSR-RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+ + R+LQS +YQ +L+ R++LP ++ R ++++ ++ +++ V++GETGSG
Sbjct: 550 RNLFRRLQSTPKYQRLLKERQQLPVFKHRASIVETLKRHRVVVVAGETGSG 600
Score = 56 (24.8 bits), Expect = 1.4e-28, Sum P(3) = 1.4e-28
Identities = 12/40 (30%), Positives = 22/40 (55%)
Query: 389 KEIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHP 428
+ +++V + F+ A I K+LR +D +L KL +P
Sbjct: 1305 ERLLSVDGWIYFQAPVKIAVIFKQLRVLIDSVLRKKLENP 1344
Score = 56 (24.8 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 16/51 (31%), Positives = 26/51 (50%)
Query: 329 VNNDVIFSLLQHICTTQR----PGAILVFLPGWDTINSLHRSMCQSSFFNS 375
+N D+I LL ++ + + GA+L+FLPG I L+ + F S
Sbjct: 845 INLDLILELLVYLDKSPQFRNIEGAVLIFLPGLAHIQQLYDLLSNDRRFYS 895
>UNIPROTKB|E2RNT3 [details] [associations]
symbol:DHX9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=IEA] [GO:0070934 "CRD-mediated mRNA stabilization"
evidence=IEA] [GO:0034605 "cellular response to heat" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001085
"RNA polymerase II transcription factor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 GO:GO:0005524 GO:GO:0005813
GO:GO:0034605 GO:GO:0005730 Gene3D:3.30.160.20 GO:GO:0030529
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:1660 KO:K13184 GO:GO:0070937
OMA:DDWIRLQ GO:GO:0070934 EMBL:AAEX03005146 EMBL:AAEX03005147
RefSeq:XP_537154.2 Ensembl:ENSCAFT00000020976 GeneID:480032
KEGG:cfa:480032 NextBio:20855120 Uniprot:E2RNT3
Length = 1276
Score = 295 (108.9 bits), Expect = 1.7e-28, Sum P(4) = 1.7e-28
Identities = 57/121 (47%), Positives = 81/121 (66%)
Query: 185 LVVP--ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGV 242
L VP +LVFLPGW+ I ++ + + + F S R+QI+PLHS +P Q+ +F+ P GV
Sbjct: 648 LNVPGAVLVFLPGWNLIYTMQKHLEMNPDFGSHRYQILPLHSQIPREEQRKVFDPVPAGV 707
Query: 243 RKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAG 302
K++L+TNIAETSITI+D+VYV+D K K+ F +N+ W S N +QR+GRAG
Sbjct: 708 TKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAG 767
Query: 303 R 303
R
Sbjct: 768 R 768
Score = 90 (36.7 bits), Expect = 0.00089, Sum P(3) = 0.00089
Identities = 18/44 (40%), Positives = 30/44 (68%)
Query: 332 DVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFFNS 375
++I +LL++I T PGA+LVFLPGW+ I ++ + + + F S
Sbjct: 636 ELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPDFGS 679
Score = 70 (29.7 bits), Expect = 1.7e-28, Sum P(4) = 1.7e-28
Identities = 15/52 (28%), Positives = 27/52 (51%)
Query: 34 KKEMIRKL-QSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
K E++ +L Q +L+ R+ LP + +L+ + N + +I G TG G
Sbjct: 366 KNELMYQLEQDHDLPAILQERELLPVKKFESEILEAISQNSVVIIRGATGCG 417
Score = 54 (24.1 bits), Expect = 1.7e-28, Sum P(4) = 1.7e-28
Identities = 15/61 (24%), Positives = 26/61 (42%)
Query: 390 EIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHPGTTAWGDPNEGNILHCCSGFS 449
+I+ V D + + A I LRA ++ L+ P + DP ++L+ S
Sbjct: 1081 QIVLVDDWIRLQISHEAAACITALRAAMEALVVEVTKQPNIISQLDPVNEHMLNMIRQIS 1140
Query: 450 R 450
R
Sbjct: 1141 R 1141
Score = 48 (22.0 bits), Expect = 1.7e-28, Sum P(4) = 1.7e-28
Identities = 10/22 (45%), Positives = 17/22 (77%)
Query: 121 DVIFSLLQHICTTQRPGAILVY 142
++I +LL++I T PGA+LV+
Sbjct: 636 ELIEALLKYIETLNVPGAVLVF 657
>UNIPROTKB|I3LCY3 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043330 "response to exogenous dsRNA" evidence=IEA]
[GO:0009615 "response to virus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009615
GO:GO:0003725 GO:GO:0004386 GO:GO:0043330
GeneTree:ENSGT00550000074257 EMBL:FP312685
Ensembl:ENSSSCT00000023601 Uniprot:I3LCY3
Length = 987
Score = 299 (110.3 bits), Expect = 1.7e-28, Sum P(2) = 1.7e-28
Identities = 81/204 (39%), Positives = 117/204 (57%)
Query: 156 FFCKNVLQ-RLMKGVGANSPKRWVKLLRSMLVVPILVFLPGWDTINSLHRSMCQSSFFNS 214
FFCK + RL+ V W L +++ +P++ LPGW I + S+F +
Sbjct: 438 FFCKKKKKNRLISSVW------WHGQL-TVIPLPMIRPLPGWLVI----LTYMVSAFVKN 486
Query: 215 SRFQII-PLHSMLPTVSQKSIFNTPPEGVRKIVLATNIAETSITIDDIVYVVDCGKTKMS 273
+F+II HS L ++ +F P GVRKIV+ATNIAETSITIDD+VYV+D GK K +
Sbjct: 487 RKFKIIFKYHSNLCYLNILQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKET 546
Query: 274 NFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRSETQQYPNDVLNMLKDPELEGVNNDV 333
+FD ++NI+T+ EW+S ANAKQR+GRAGR Y ++L D +L ++
Sbjct: 547 HFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLP----EI 602
Query: 334 IFSLLQHICTT---QRPGAILVFL 354
+ + L+ +C R G I FL
Sbjct: 603 LRTPLEELCLQIKILRLGGIAYFL 626
Score = 89 (36.4 bits), Expect = 1.7e-28, Sum P(2) = 1.7e-28
Identities = 20/63 (31%), Positives = 33/63 (52%)
Query: 376 CLLY---EFAMVDNKPKEIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHPGTTA 432
CLL+ + ++ + +E I V + + F+ A ++KELR LD+LL K+ P
Sbjct: 888 CLLFFGGDISIQKDSDQETIAVDEWIIFQSPARIAHLVKELRKELDILLQEKIESPHPVD 947
Query: 433 WGD 435
W D
Sbjct: 948 WKD 950
>MGI|MGI:108177 [details] [associations]
symbol:Dhx9 "DEAH (Asp-Glu-Ala-His) box polypeptide 9"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001085 "RNA polymerase II transcription factor
binding" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005813 "centrosome" evidence=ISO]
[GO:0007623 "circadian rhythm" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0030529 "ribonucleoprotein
complex" evidence=ISO] [GO:0034605 "cellular response to heat"
evidence=IDA] [GO:0070934 "CRD-mediated mRNA stabilization"
evidence=ISO] [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=ISO] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 MGI:MGI:108177 GO:GO:0005524
GO:GO:0034605 GO:GO:0005730 GO:GO:0003677 GO:GO:0007623
Gene3D:3.30.160.20 GO:GO:0030529 GO:GO:0003725 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247063 CTD:1660
HOVERGEN:HBG039429 KO:K13184 OrthoDB:EOG4HHP1J GO:GO:0070937
EMBL:U91922 EMBL:AF023530 EMBL:AY512925 EMBL:BC089159 EMBL:AK013423
EMBL:U92080 IPI:IPI00339468 IPI:IPI00607914 IPI:IPI00875791
RefSeq:NP_031868.2 UniGene:Mm.20000 PDB:1UIL PDB:1WHQ PDB:2RS6
PDB:2RS7 PDBsum:1UIL PDBsum:1WHQ PDBsum:2RS6 PDBsum:2RS7
ProteinModelPortal:O70133 SMR:O70133 IntAct:O70133 STRING:O70133
PhosphoSite:O70133 PaxDb:O70133 PRIDE:O70133 GeneID:13211
KEGG:mmu:13211 UCSC:uc007czy.1 InParanoid:O70133 ChiTaRS:DHX9
EvolutionaryTrace:O70133 NextBio:283382 CleanEx:MM_DHX9
Genevestigator:O70133 GermOnline:ENSMUSG00000042699 Uniprot:O70133
Length = 1380
Score = 305 (112.4 bits), Expect = 2.2e-28, Sum P(3) = 2.2e-28
Identities = 58/121 (47%), Positives = 83/121 (68%)
Query: 185 LVVP--ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGV 242
L VP +LVFLPGW+ I ++ + + +S F S R+QI+PLHS +P Q+ +F+ P+GV
Sbjct: 649 LNVPGAVLVFLPGWNLIYTMQKHLENNSHFGSHRYQILPLHSQIPREEQRKVFDPVPDGV 708
Query: 243 RKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAG 302
K++L+TNIAETSITI+D+VYV+D K K+ F +N+ W S N +QR+GRAG
Sbjct: 709 TKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAG 768
Query: 303 R 303
R
Sbjct: 769 R 769
Score = 98 (39.6 bits), Expect = 0.00076, Sum P(2) = 0.00076
Identities = 24/62 (38%), Positives = 38/62 (61%)
Query: 314 PNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQSSFF 373
P L+M + E E ++I +LL++I T PGA+LVFLPGW+ I ++ + + +S F
Sbjct: 620 PETKLSMSQLNEKE-TPFELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLENNSHF 678
Query: 374 NS 375
S
Sbjct: 679 GS 680
Score = 74 (31.1 bits), Expect = 2.2e-28, Sum P(3) = 2.2e-28
Identities = 15/52 (28%), Positives = 28/52 (53%)
Query: 34 KKEMIRKL-QSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
K E+ ++ Q Q +L+ R+ LP + +L+ + +N + +I G TG G
Sbjct: 367 KNELTYQMEQDHNLQSVLQERELLPVKKFEAEILEAISSNSVVIIRGATGCG 418
Score = 49 (22.3 bits), Expect = 2.2e-28, Sum P(3) = 2.2e-28
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 103 PNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVY 142
P L+M + E E ++I +LL++I T PGA+LV+
Sbjct: 620 PETKLSMSQLNEKE-TPFELIEALLKYIETLNVPGAVLVF 658
>UNIPROTKB|G4MZR9 [details] [associations]
symbol:MGG_07059 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp22" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR009060 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00591 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR015940 SMART:SM00165 Gene3D:3.10.110.10
InterPro:IPR016135 SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:CM001232 SUPFAM:SSF46934 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 RefSeq:XP_003715240.1
ProteinModelPortal:G4MZR9 EnsemblFungi:MGG_07059T0 GeneID:2682944
KEGG:mgr:MGG_07059 Uniprot:G4MZR9
Length = 1404
Score = 263 (97.6 bits), Expect = 2.6e-28, Sum P(3) = 2.6e-28
Identities = 58/115 (50%), Positives = 76/115 (66%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL+FLPG IN M +S N ++PLH+ L T Q+ +F PP G RK+V+A
Sbjct: 890 ILIFLPGVAEINRAC-GMLRS--LNC--LHVLPLHASLETKEQRKVFVPPPSGKRKVVVA 944
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TN+AETSITIDDI+ VVD GK K +++D +N+ L+ + SLA KQRRGRAGR
Sbjct: 945 TNVAETSITIDDIIVVVDTGKVKETSYDAANNMRRLEETFASLAACKQRRGRAGR 999
Score = 134 (52.2 bits), Expect = 2.6e-28, Sum P(3) = 2.6e-28
Identities = 24/55 (43%), Positives = 41/55 (74%)
Query: 30 DAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
D+A K E +R+ ++ Y++ML R+KLP++ +RD ++ V +Q+T+I+GETGSG
Sbjct: 607 DSASKNEWLRRQETPEYRKMLGQRQKLPAWLLRDEIVRTVAEHQVTIIAGETGSG 661
Score = 50 (22.7 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 10/17 (58%), Positives = 12/17 (70%)
Query: 345 QRPGAILVFLPGWDTIN 361
Q+ G IL+FLPG IN
Sbjct: 885 QKSGGILIFLPGVAEIN 901
Score = 43 (20.2 bits), Expect = 6.2e-19, Sum P(3) = 6.2e-19
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 76 VISGETGSGPPLHLDFIT 93
+I GE+ +GP + F+T
Sbjct: 717 IIRGESRTGPKTRITFVT 734
Score = 42 (19.8 bits), Expect = 2.6e-28, Sum P(3) = 2.6e-28
Identities = 9/28 (32%), Positives = 20/28 (71%)
Query: 315 NDVLNM-LKDPELEGVNNDVIFSLLQHI 341
+DV+ + + DP L+ +ND+I ++++ I
Sbjct: 1370 DDVIALKVDDPSLDLADNDIIRAVIKLI 1397
Score = 42 (19.8 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 9/28 (32%), Positives = 20/28 (71%)
Query: 104 NDVLNM-LKDPELEGVNNDVIFSLLQHI 130
+DV+ + + DP L+ +ND+I ++++ I
Sbjct: 1370 DDVIALKVDDPSLDLADNDIIRAVIKLI 1397
>UNIPROTKB|Q9H6S0 [details] [associations]
symbol:YTHDC2 "Probable ATP-dependent RNA helicase YTHDC2"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50088 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00248 SMART:SM00490 SMART:SM00847
GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 EMBL:AC093208 EMBL:AC010389 EMBL:BC137285
EMBL:AK025593 IPI:IPI00010200 RefSeq:NP_073739.3 UniGene:Hs.231942
PDB:2YU6 PDBsum:2YU6 ProteinModelPortal:Q9H6S0 SMR:Q9H6S0
IntAct:Q9H6S0 PhosphoSite:Q9H6S0 DMDM:239938805 PaxDb:Q9H6S0
PeptideAtlas:Q9H6S0 PRIDE:Q9H6S0 Ensembl:ENST00000161863
GeneID:64848 KEGG:hsa:64848 UCSC:uc003kqn.3 CTD:64848
GeneCards:GC05P112877 HGNC:HGNC:24721 HPA:HPA037364
neXtProt:NX_Q9H6S0 PharmGKB:PA134912676 HOGENOM:HOG000155703
HOVERGEN:HBG063891 InParanoid:Q9H6S0 OMA:RAFWESS OrthoDB:EOG4JWVCN
PhylomeDB:Q9H6S0 EvolutionaryTrace:Q9H6S0 GenomeRNAi:64848
NextBio:66962 ArrayExpress:Q9H6S0 Bgee:Q9H6S0 CleanEx:HS_YTHDC2
Genevestigator:Q9H6S0 GermOnline:ENSG00000047188 Uniprot:Q9H6S0
Length = 1430
Score = 288 (106.4 bits), Expect = 5.7e-28, Sum P(4) = 5.7e-28
Identities = 59/118 (50%), Positives = 79/118 (66%)
Query: 189 ILVFLPGWDTINSLH-RSMCQSSFFNSS--RFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
+L+FLPG+D I L R + F S R+Q+ LHS + T QK + PP GVRKI
Sbjct: 625 VLIFLPGYDEIVGLRDRILFDDKRFADSTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKI 684
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+L+TNIAETSIT++D+V+V+D GK K +FD + + LK WIS A+A QR+GRAGR
Sbjct: 685 ILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGR 742
Score = 75 (31.5 bits), Expect = 5.7e-28, Sum P(4) = 5.7e-28
Identities = 11/32 (34%), Positives = 24/32 (75%)
Query: 53 RKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
R+ LP ++ ++ ++ +++ N++ +I GETGSG
Sbjct: 190 RQSLPVFEKQEEIVKIIKENKVVLIVGETGSG 221
Score = 52 (23.4 bits), Expect = 5.7e-28, Sum P(4) = 5.7e-28
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 116 EGVNNDVIFSLLQHICTTQRPGAILVY 142
E V+ D+I LL +IC + GA+L++
Sbjct: 602 EKVDLDLIMHLLYNICHSCDAGAVLIF 628
Score = 52 (23.4 bits), Expect = 5.7e-28, Sum P(4) = 5.7e-28
Identities = 25/106 (23%), Positives = 43/106 (40%)
Query: 342 CTTQRPGAILVFL-PGWDTINSLHRSMCQSSFFNSCLLYEFA---MVDNKPKEIITVR-- 395
C+ P ILVF P N+L SSF + + + M D + ++
Sbjct: 1052 CSAVTPVTILVFCGPARLASNALQEP---SSFRVDGIPNDSSDSEMEDKTTANLAALKLD 1108
Query: 396 DCLSFECKPSTAKIIKELRARLDMLLAHKLSHPGTTAWGDPNEGNI 441
+ L F +P A ++ +LR + L ++ P + W +E I
Sbjct: 1109 EWLHFTLEPEAASLLLQLRQKWHSLFLRRMRAP-SKPWSQVDEATI 1153
Score = 41 (19.5 bits), Expect = 1.7e-24, Sum P(4) = 1.7e-24
Identities = 16/66 (24%), Positives = 27/66 (40%)
Query: 35 KEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHLDFITL 94
K +R L R E + LP + + N +++ SG +G P I +
Sbjct: 124 KHAVRSLIQRFPVTNKERTELLPKTERGNVFAVEAENREMSKTSGRLNNGIPQ----IPV 179
Query: 95 KRSETQ 100
KR E++
Sbjct: 180 KRGESE 185
>UNIPROTKB|E2QZR7 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 GO:GO:0008026
InterPro:IPR007275 Pfam:PF04146 PROSITE:PS50882 OMA:RAFWESS
EMBL:AAEX03007702 Ensembl:ENSCAFT00000000357 Uniprot:E2QZR7
Length = 1376
Score = 294 (108.6 bits), Expect = 6.9e-28, Sum P(4) = 6.9e-28
Identities = 60/118 (50%), Positives = 80/118 (67%)
Query: 189 ILVFLPGWDTINSLH-RSMCQSSFF--NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
IL+FLPG+D I L R + F N+ R+Q+ LHS + T QK + PP GVRKI
Sbjct: 625 ILIFLPGYDEIVGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKI 684
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+L+TNIAETSIT++D+V+V+D GK K +FD + + LK WIS A+A QR+GRAGR
Sbjct: 685 ILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAVQRKGRAGR 742
Score = 75 (31.5 bits), Expect = 6.9e-28, Sum P(4) = 6.9e-28
Identities = 11/32 (34%), Positives = 24/32 (75%)
Query: 53 RKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
R+ LP ++ ++ ++ +++ N++ +I GETGSG
Sbjct: 189 RQSLPVFEKQEEIVKIIKENKVVLIVGETGSG 220
Score = 51 (23.0 bits), Expect = 6.9e-28, Sum P(4) = 6.9e-28
Identities = 11/44 (25%), Positives = 21/44 (47%)
Query: 398 LSFECKPSTAKIIKELRARLDMLLAHKLSHPGTTAWGDPNEGNI 441
L+F+ P A ++ +LR + L ++ P + W +E I
Sbjct: 1057 LNFKLDPEAASLLLQLRQKWHSLFLRRMRAP-SKPWSQVDEATI 1099
Score = 43 (20.2 bits), Expect = 6.9e-28, Sum P(4) = 6.9e-28
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 116 EGVNNDVIFSLLQHICTTQRPGAILVY 142
E V+ D+I LL +IC AIL++
Sbjct: 602 EKVDLDLIMHLLYNICHGCHKCAILIF 628
Score = 41 (19.5 bits), Expect = 2.1e-24, Sum P(4) = 2.1e-24
Identities = 16/66 (24%), Positives = 27/66 (40%)
Query: 35 KEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHLDFITL 94
K +R L R E + LP + + N +++ SG +G P I +
Sbjct: 123 KHAVRSLIQRFPVTNKERTELLPKTERGNVFAVEAENREMSKTSGRLNNGIPQ----IPV 178
Query: 95 KRSETQ 100
KR E++
Sbjct: 179 KRGESE 184
>UNIPROTKB|J9PAM3 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 GO:GO:0008026
EMBL:AAEX03007702 Ensembl:ENSCAFT00000046695 Uniprot:J9PAM3
Length = 1000
Score = 294 (108.6 bits), Expect = 1.2e-27, Sum P(3) = 1.2e-27
Identities = 60/118 (50%), Positives = 80/118 (67%)
Query: 189 ILVFLPGWDTINSLH-RSMCQSSFF--NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
IL+FLPG+D I L R + F N+ R+Q+ LHS + T QK + PP GVRKI
Sbjct: 624 ILIFLPGYDEIVGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKI 683
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+L+TNIAETSIT++D+V+V+D GK K +FD + + LK WIS A+A QR+GRAGR
Sbjct: 684 ILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAVQRKGRAGR 741
Score = 75 (31.5 bits), Expect = 1.2e-27, Sum P(3) = 1.2e-27
Identities = 11/32 (34%), Positives = 24/32 (75%)
Query: 53 RKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
R+ LP ++ ++ ++ +++ N++ +I GETGSG
Sbjct: 189 RQSLPVFEKQEEIVKIIKENKVVLIVGETGSG 220
Score = 50 (22.7 bits), Expect = 1.2e-27, Sum P(3) = 1.2e-27
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 116 EGVNNDVIFSLLQHICTTQRPGAILVY 142
E V+ D+I LL +IC GAIL++
Sbjct: 601 EKVDLDLIMHLLYNICHGCDAGAILIF 627
Score = 41 (19.5 bits), Expect = 3.8e-24, Sum P(3) = 3.8e-24
Identities = 16/66 (24%), Positives = 27/66 (40%)
Query: 35 KEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHLDFITL 94
K +R L R E + LP + + N +++ SG +G P I +
Sbjct: 123 KHAVRSLIQRFPVTNKERTELLPKTERGNVFAVEAENREMSKTSGRLNNGIPQ----IPV 178
Query: 95 KRSETQ 100
KR E++
Sbjct: 179 KRGESE 184
>UNIPROTKB|F1P1F4 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9031 "Gallus gallus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0042645
"mitochondrial nucleoid" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0042645
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 IPI:IPI00593383 OMA:LHKEERY EMBL:AADN02000053
Ensembl:ENSGALT00000008045 Uniprot:F1P1F4
Length = 1231
Score = 312 (114.9 bits), Expect = 1.6e-27, Sum P(2) = 1.6e-27
Identities = 61/133 (45%), Positives = 86/133 (64%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + + +SR+ ++P+HS +P + Q++IF PP GVRKIVLA
Sbjct: 714 ILCFLPGWQEIKGVQQRLLEMLGSQNSRYLVLPVHSNIPMMDQQNIFQRPPPGVRKIVLA 773
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITI+DIV+VVD G K +D+K ++ L+ W+S +N QRRGRAGR
Sbjct: 774 TNIAETSITINDIVHVVDSGTHKEERYDLKTKVSCLETVWVSKSNVVQRRGRAGRCQSGF 833
Query: 309 ETQQYPNDVLNML 321
+P L+ +
Sbjct: 834 AYHLFPRSRLDKM 846
Score = 66 (28.3 bits), Expect = 1.6e-27, Sum P(2) = 1.6e-27
Identities = 19/71 (26%), Positives = 34/71 (47%)
Query: 27 PVLDAAFKK--EMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
P+L+A + + + L RR E+ LP +D +L + N + VI+G+TG G
Sbjct: 448 PMLEAEEVRLSQNLLALWKRRGSSWQESHP-LPVDPHKDTILSAIEQNPVVVIAGDTGCG 506
Query: 85 PPLHLDFITLK 95
+ + L+
Sbjct: 507 KTTRIPQLLLE 517
>UNIPROTKB|Q5ZI74 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9031 "Gallus gallus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=ISS] [GO:0042645
"mitochondrial nucleoid" evidence=ISS] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003682
GO:GO:0042645 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OrthoDB:EOG4VHK5M EMBL:AJ720910 IPI:IPI00593383
RefSeq:NP_001012869.1 UniGene:Gga.2762 ProteinModelPortal:Q5ZI74
SMR:Q5ZI74 GeneID:420376 KEGG:gga:420376 InParanoid:Q5ZI74
NextBio:20823291 Uniprot:Q5ZI74
Length = 1231
Score = 312 (114.9 bits), Expect = 1.6e-27, Sum P(2) = 1.6e-27
Identities = 61/133 (45%), Positives = 86/133 (64%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL FLPGW I + + + + +SR+ ++P+HS +P + Q++IF PP GVRKIVLA
Sbjct: 714 ILCFLPGWQEIKGVQQRLLEMLGSQNSRYLVLPVHSNIPMMDQQNIFQRPPPGVRKIVLA 773
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITI+DIV+VVD G K +D+K ++ L+ W+S +N QRRGRAGR
Sbjct: 774 TNIAETSITINDIVHVVDSGTHKEERYDLKTKVSCLETVWVSKSNVVQRRGRAGRCQSGF 833
Query: 309 ETQQYPNDVLNML 321
+P L+ +
Sbjct: 834 AYHLFPRSRLDKM 846
Score = 66 (28.3 bits), Expect = 1.6e-27, Sum P(2) = 1.6e-27
Identities = 19/71 (26%), Positives = 34/71 (47%)
Query: 27 PVLDAAFKK--EMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
P+L+A + + + L RR E+ LP +D +L + N + VI+G+TG G
Sbjct: 448 PMLEAEEVRLSQNLLALWKRRGSSWQESHP-LPVDPHKDTILSAIEQNPVVVIAGDTGCG 506
Query: 85 PPLHLDFITLK 95
+ + L+
Sbjct: 507 KTTRIPQLLLE 517
>UNIPROTKB|E1C388 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 CTD:54505 OMA:WLLYQEK
GeneTree:ENSGT00550000074257 EMBL:AADN02054528 EMBL:AADN02054529
EMBL:AADN02054530 IPI:IPI00580778 RefSeq:XP_424728.2
UniGene:Gga.12357 Ensembl:ENSGALT00000023700 GeneID:427136
KEGG:gga:427136 NextBio:20828443 Uniprot:E1C388
Length = 1372
Score = 257 (95.5 bits), Expect = 3.3e-27, Sum P(3) = 3.3e-27
Identities = 54/116 (46%), Positives = 77/116 (66%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN-SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
+L+FLPG I L+ + F+ R ++I LHS+L T Q + F PP GVRKIVL
Sbjct: 871 VLIFLPGLAHIQQLYDLISTDRRFSLCDRHRLIALHSVLSTQDQAAAFTVPPLGVRKIVL 930
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
ATNIAET ITI D+V+V+D G+TK + + +++L+ ++S A+A QR+GRAGR
Sbjct: 931 ATNIAETGITIPDVVFVIDSGRTKENRYHESSQMSSLEETFVSKASALQRQGRAGR 986
Score = 115 (45.5 bits), Expect = 3.3e-27, Sum P(3) = 3.3e-27
Identities = 20/51 (39%), Positives = 39/51 (76%)
Query: 35 KEMIRKLQSR-RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+ + RKLQS RYQ+ L+ R++LP ++ R ++++ ++ +++ V++GETGSG
Sbjct: 552 RNLFRKLQSSSRYQKFLKERQELPVFKHRHSIVETLKKHRVVVVAGETGSG 602
Score = 57 (25.1 bits), Expect = 3.3e-27, Sum P(3) = 3.3e-27
Identities = 12/40 (30%), Positives = 22/40 (55%)
Query: 389 KEIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHP 428
+ ++TV + F+ A I K+LR ++ +L KL +P
Sbjct: 1310 EHLLTVDGWIHFQAPVKIAVIFKQLRVLIESVLQKKLENP 1349
Score = 57 (25.1 bits), Expect = 2.6e-05, Sum P(3) = 2.6e-05
Identities = 15/52 (28%), Positives = 27/52 (51%)
Query: 329 VNNDVIFSLLQHICTTQR----PGAILVFLPGWDTINSLHRSMCQSSFFNSC 376
+N ++I LL ++ + + GA+L+FLPG I L+ + F+ C
Sbjct: 846 INLELILELLAYLDRSPQFKNTEGAVLIFLPGLAHIQQLYDLISTDRRFSLC 897
>UNIPROTKB|H7C5F5 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
GO:GO:0004386 EMBL:AC018452 EMBL:AC134026 HGNC:HGNC:14410
ProteinModelPortal:H7C5F5 Ensembl:ENST00000469977 Uniprot:H7C5F5
Length = 188
Score = 306 (112.8 bits), Expect = 3.3e-27, P = 3.3e-27
Identities = 62/123 (50%), Positives = 86/123 (69%)
Query: 220 IPLHSMLPTVSQKSIFNTPPEGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKD 279
IPLHS++PTV+Q +F P GVRKIV+ATNIAETSITIDD+VYV+D GK K ++FD ++
Sbjct: 2 IPLHSLMPTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQN 61
Query: 280 NIATLKPEWISLANAKQRRGRAGRTLKRSETQQYPNDVLNMLKDPELEGVNNDVIFSLLQ 339
NI+T+ EW+S ANAKQR+GRAGR Y ++L D +L +++ + L+
Sbjct: 62 NISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLP----EILRTPLE 117
Query: 340 HIC 342
+C
Sbjct: 118 ELC 120
>CGD|CAL0005664 [details] [associations]
symbol:orf19.6818 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908 PROSITE:PS51194
SMART:SM00490 SMART:SM00591 SMART:SM00847 CGD:CAL0005664
GO:GO:0005524 GO:GO:0003676 Gene3D:3.10.110.10 InterPro:IPR016135
SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
EMBL:AACQ01000029 EMBL:AACQ01000028 RefSeq:XP_719795.1
RefSeq:XP_719912.1 ProteinModelPortal:Q5ADM3 GeneID:3638543
GeneID:3638643 KEGG:cal:CaO19.14110 KEGG:cal:CaO19.6818
Uniprot:Q5ADM3
Length = 1370
Score = 270 (100.1 bits), Expect = 7.8e-27, Sum P(3) = 7.8e-27
Identities = 64/137 (46%), Positives = 82/137 (59%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL+FLPG I+S + + +SS ++F +PLHS L + QKSIF T P+G RK+V++
Sbjct: 823 ILIFLPGVLEISSTIKEINKSS---DNKFMALPLHSGLTSAEQKSIFKTAPKGKRKVVVS 879
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITI D V V+D GK+K FD K N L W S A +QRRGRAGR +
Sbjct: 880 TNIAETSITIPDCVAVIDTGKSKNLFFDHKLNTTKLIESWCSQAEVRQRRGRAGRVTAGT 939
Query: 309 ETQQYPNDVLN-MLKDP 324
Y + M K P
Sbjct: 940 CYHLYTKETFEAMQKQP 956
Score = 106 (42.4 bits), Expect = 7.8e-27, Sum P(3) = 7.8e-27
Identities = 21/56 (37%), Positives = 37/56 (66%)
Query: 30 DAAFKKEMIRKLQ-SRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
D KE +K + S ++EML R KLP++ +++++ + + Q+T+I+GETGSG
Sbjct: 546 DIELVKESYKKRKHSDEFKEMLIQRSKLPAFAKQESLMTAINSGQVTLITGETGSG 601
Score = 47 (21.6 bits), Expect = 7.8e-27, Sum P(3) = 7.8e-27
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 402 CKPSTAKIIKELRARLDMLLAHKLSHP 428
CK +IK LR +D ++ KLS+P
Sbjct: 1328 CKNGV--LIKHLRRLIDSVIDEKLSNP 1352
Score = 41 (19.5 bits), Expect = 3.9e-20, Sum P(3) = 3.9e-20
Identities = 10/66 (15%), Positives = 34/66 (51%)
Query: 87 LHLDFITLKRSETQQYPNDV--LNMLKDPELEGVNNDVIFSLLQHICT--TQRPGAILVY 142
L +F+ +K +++ YPN++ ++++ + N + ++++ + T G ++Y
Sbjct: 435 LEHNFLNVKIFKSENYPNEIPGIHIVVSKNEYTLANYIKLAIVRELLKYLTDHIGQCMIY 494
Query: 143 CTYTFM 148
+ ++
Sbjct: 495 TIFEWL 500
Score = 38 (18.4 bits), Expect = 6.7e-26, Sum P(3) = 6.7e-26
Identities = 11/44 (25%), Positives = 19/44 (43%)
Query: 399 SFECKPSTAKIIKELRARLDMLLAHKLSHPGTTAWGDPNEGNIL 442
S E P +I +++ ++ A HP + + D N IL
Sbjct: 1179 SIEIDPDARQIKFWIKSDGELPAARVFIHPSSVLFNDNNSDFIL 1222
>UNIPROTKB|Q5ADM3 [details] [associations]
symbol:CaO19.14110 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908 PROSITE:PS51194
SMART:SM00490 SMART:SM00591 SMART:SM00847 CGD:CAL0005664
GO:GO:0005524 GO:GO:0003676 Gene3D:3.10.110.10 InterPro:IPR016135
SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
EMBL:AACQ01000029 EMBL:AACQ01000028 RefSeq:XP_719795.1
RefSeq:XP_719912.1 ProteinModelPortal:Q5ADM3 GeneID:3638543
GeneID:3638643 KEGG:cal:CaO19.14110 KEGG:cal:CaO19.6818
Uniprot:Q5ADM3
Length = 1370
Score = 270 (100.1 bits), Expect = 7.8e-27, Sum P(3) = 7.8e-27
Identities = 64/137 (46%), Positives = 82/137 (59%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL+FLPG I+S + + +SS ++F +PLHS L + QKSIF T P+G RK+V++
Sbjct: 823 ILIFLPGVLEISSTIKEINKSS---DNKFMALPLHSGLTSAEQKSIFKTAPKGKRKVVVS 879
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITI D V V+D GK+K FD K N L W S A +QRRGRAGR +
Sbjct: 880 TNIAETSITIPDCVAVIDTGKSKNLFFDHKLNTTKLIESWCSQAEVRQRRGRAGRVTAGT 939
Query: 309 ETQQYPNDVLN-MLKDP 324
Y + M K P
Sbjct: 940 CYHLYTKETFEAMQKQP 956
Score = 106 (42.4 bits), Expect = 7.8e-27, Sum P(3) = 7.8e-27
Identities = 21/56 (37%), Positives = 37/56 (66%)
Query: 30 DAAFKKEMIRKLQ-SRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
D KE +K + S ++EML R KLP++ +++++ + + Q+T+I+GETGSG
Sbjct: 546 DIELVKESYKKRKHSDEFKEMLIQRSKLPAFAKQESLMTAINSGQVTLITGETGSG 601
Score = 47 (21.6 bits), Expect = 7.8e-27, Sum P(3) = 7.8e-27
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 402 CKPSTAKIIKELRARLDMLLAHKLSHP 428
CK +IK LR +D ++ KLS+P
Sbjct: 1328 CKNGV--LIKHLRRLIDSVIDEKLSNP 1352
Score = 41 (19.5 bits), Expect = 3.9e-20, Sum P(3) = 3.9e-20
Identities = 10/66 (15%), Positives = 34/66 (51%)
Query: 87 LHLDFITLKRSETQQYPNDV--LNMLKDPELEGVNNDVIFSLLQHICT--TQRPGAILVY 142
L +F+ +K +++ YPN++ ++++ + N + ++++ + T G ++Y
Sbjct: 435 LEHNFLNVKIFKSENYPNEIPGIHIVVSKNEYTLANYIKLAIVRELLKYLTDHIGQCMIY 494
Query: 143 CTYTFM 148
+ ++
Sbjct: 495 TIFEWL 500
Score = 38 (18.4 bits), Expect = 6.7e-26, Sum P(3) = 6.7e-26
Identities = 11/44 (25%), Positives = 19/44 (43%)
Query: 399 SFECKPSTAKIIKELRARLDMLLAHKLSHPGTTAWGDPNEGNIL 442
S E P +I +++ ++ A HP + + D N IL
Sbjct: 1179 SIEIDPDARQIKFWIKSDGELPAARVFIHPSSVLFNDNNSDFIL 1222
>TAIR|locus:2196265 [details] [associations]
symbol:AT1G58060 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
IPI:IPI00533149 RefSeq:NP_176103.2 UniGene:At.27872
ProteinModelPortal:F4I9Q5 SMR:F4I9Q5 PRIDE:F4I9Q5
EnsemblPlants:AT1G58060.1 GeneID:842173 KEGG:ath:AT1G58060
OMA:FLSYKSP Uniprot:F4I9Q5
Length = 1459
Score = 272 (100.8 bits), Expect = 8.9e-27, Sum P(4) = 8.9e-27
Identities = 63/150 (42%), Positives = 89/150 (59%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQ-IIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
IL+FLPG I L + S F ++PLHS + + Q+ +F PP+G+RK++
Sbjct: 918 ILIFLPGVAEIYMLLDMLAASYRFRGPAADWLLPLHSSIASSEQRKVFLRPPKGLRKVIA 977
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR---- 303
ATNIAETSITIDD+VYV+D GK K + ++ + ++++ +WIS ANA+QR GRAGR
Sbjct: 978 ATNIAETSITIDDVVYVIDSGKHKENRYNPQKKLSSMVEDWISQANARQRTGRAGRVKPG 1037
Query: 304 ------TLKRSETQQYPNDVLNMLKDPELE 327
T R E P V ML+ P +E
Sbjct: 1038 ICFSLYTRYRFEKLMRPYQVPEMLRMPLVE 1067
Score = 94 (38.1 bits), Expect = 8.9e-27, Sum P(4) = 8.9e-27
Identities = 15/53 (28%), Positives = 35/53 (66%)
Query: 32 AFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+ +++ K ++++Y++ML+ R LP ++++ +L ++ + V+ GETGSG
Sbjct: 590 SLQRKQENKKRTQKYKDMLKTRTALPISEVKNGILQHLKEKDVLVVCGETGSG 642
Score = 49 (22.3 bits), Expect = 8.9e-27, Sum P(4) = 8.9e-27
Identities = 24/84 (28%), Positives = 34/84 (40%)
Query: 345 QRPGAILVFLPGWDTINSLHRSMCQSSFFNSCLLYEFAMVDNKPKEIITVRDCLSFECKP 404
Q P LVFL +T R S F S LL+ ++ + +T+ L
Sbjct: 1352 QNP--FLVFLEKVETNKVYLRDTTIVSPF-SILLFGGSINVHHQSGSVTIDGWLKVAAPA 1408
Query: 405 STAKIIKELRARLDMLLAHKLSHP 428
TA + KELR L +L + P
Sbjct: 1409 QTAVLFKELRLTLHSILKDLIRKP 1432
Score = 46 (21.3 bits), Expect = 8.9e-27, Sum P(4) = 8.9e-27
Identities = 12/46 (26%), Positives = 22/46 (47%)
Query: 97 SETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVY 142
S Y + LK + ++ +++ L+ HI T GAIL++
Sbjct: 876 SNYNSYSDQTQQNLKRLNEDRIDYELLEELICHIDDTCEEGAILIF 921
>UNIPROTKB|D6RA70 [details] [associations]
symbol:YTHDC2 "Probable ATP-dependent RNA helicase YTHDC2"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF01424 PROSITE:PS50088
PROSITE:PS51061 PROSITE:PS51194 SMART:SM00248 SMART:SM00490
GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 EMBL:AC093208
EMBL:AC010389 HGNC:HGNC:24721 IPI:IPI00964960
ProteinModelPortal:D6RA70 SMR:D6RA70 Ensembl:ENST00000515883
UCSC:uc010jcf.2 HOGENOM:HOG000205632 ArrayExpress:D6RA70
Bgee:D6RA70 Uniprot:D6RA70
Length = 739
Score = 273 (101.2 bits), Expect = 8.3e-26, Sum P(3) = 8.3e-26
Identities = 56/115 (48%), Positives = 76/115 (66%)
Query: 189 ILVFLPGWDTINSLH-RSMCQSSFFNSS--RFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
+L+FLPG+D I L R + F S R+Q+ LHS + T QK + PP GVRKI
Sbjct: 625 VLIFLPGYDEIVGLRDRILFDDKRFADSTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKI 684
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGR 300
+L+TNIAETSIT++D+V+V+D GK K +FD + + LK WIS A+A QR+GR
Sbjct: 685 ILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGR 739
Score = 75 (31.5 bits), Expect = 8.3e-26, Sum P(3) = 8.3e-26
Identities = 11/32 (34%), Positives = 24/32 (75%)
Query: 53 RKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
R+ LP ++ ++ ++ +++ N++ +I GETGSG
Sbjct: 190 RQSLPVFEKQEEIVKIIKENKVVLIVGETGSG 221
Score = 52 (23.4 bits), Expect = 8.3e-26, Sum P(3) = 8.3e-26
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 116 EGVNNDVIFSLLQHICTTQRPGAILVY 142
E V+ D+I LL +IC + GA+L++
Sbjct: 602 EKVDLDLIMHLLYNICHSCDAGAVLIF 628
Score = 41 (19.5 bits), Expect = 2.7e-22, Sum P(3) = 2.7e-22
Identities = 16/66 (24%), Positives = 27/66 (40%)
Query: 35 KEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHLDFITL 94
K +R L R E + LP + + N +++ SG +G P I +
Sbjct: 124 KHAVRSLIQRFPVTNKERTELLPKTERGNVFAVEAENREMSKTSGRLNNGIPQ----IPV 179
Query: 95 KRSETQ 100
KR E++
Sbjct: 180 KRGESE 185
>UNIPROTKB|F1RLG0 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR002110 InterPro:IPR001650
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS50088
PROSITE:PS51194 SMART:SM00248 SMART:SM00490 SMART:SM00847
GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676 GO:GO:0004386
InterPro:IPR014001 PROSITE:PS51192 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 OMA:RAFWESS EMBL:CU462841
Ensembl:ENSSSCT00000015529 Uniprot:F1RLG0
Length = 1151
Score = 288 (106.4 bits), Expect = 1.2e-25, Sum P(3) = 1.2e-25
Identities = 60/119 (50%), Positives = 81/119 (68%)
Query: 189 ILVFLPGWDTINSLH-RSMCQSSFF--NS-SRFQIIPLHSMLPTVSQKSIFNTPPEGVRK 244
+L+FLPG+D I L R + F N+ SR+Q+ LHS + T QK + PP GVRK
Sbjct: 345 VLIFLPGYDEIVGLRDRILFDDKRFADNTHSRYQVFMLHSNMQTSDQKKVLKNPPAGVRK 404
Query: 245 IVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
I+L+TNIAETSIT++D+V+V+D GK K +FD + + LK WIS A+A QR+GRAGR
Sbjct: 405 IILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGR 463
Score = 64 (27.6 bits), Expect = 1.2e-25, Sum P(3) = 1.2e-25
Identities = 26/106 (24%), Positives = 46/106 (43%)
Query: 342 CTTQRPGAILVFL-PGWDTINSLHRSMCQSSFFNSCLLYEFA---MVDNKPKEIITVR-- 395
C+ P +LVF P N+L SSF + + + M D + T++
Sbjct: 773 CSAVTPVTVLVFCGPARLASNALQEP---SSFRADGIPNDSSDSEMEDRTTANLATLKLD 829
Query: 396 DCLSFECKPSTAKIIKELRARLDMLLAHKLSHPGTTAWGDPNEGNI 441
+ LSF+ +P A ++ +LR + L ++ P + W +E I
Sbjct: 830 EWLSFKLEPEAASLLLQLRQKWHSLFLRRMRAP-SKPWSQVDEATI 874
Score = 52 (23.4 bits), Expect = 1.2e-25, Sum P(3) = 1.2e-25
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 116 EGVNNDVIFSLLQHICTTQRPGAILVY 142
E V+ D+I LL +IC + GA+L++
Sbjct: 322 EKVDLDLIMHLLYNICHSCDAGAVLIF 348
>SGD|S000004411 [details] [associations]
symbol:YLR419W "Putative helicase with limited sequence
similarity to human Rb protein" species:4932 "Saccharomyces
cerevisiae" [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50908 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00591 SMART:SM00847
SGD:S000004411 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
EMBL:BK006945 InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030
Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:U20162
RefSeq:NP_013525.3 GeneID:851140 KEGG:sce:YLR421C KO:K06691
HOGENOM:HOG000167651 OMA:GWARIGV OrthoDB:EOG4Z65WS
RefSeq:NP_013523.3 GeneID:851137 KEGG:sce:YLR419W PIR:S59384
ProteinModelPortal:Q06698 SMR:Q06698 IntAct:Q06698
MINT:MINT-2492948 STRING:Q06698 PaxDb:Q06698 PeptideAtlas:Q06698
PRIDE:Q06698 EnsemblFungi:YLR419W CYGD:YLR419w
GeneTree:ENSGT00680000101018 NextBio:967890 Genevestigator:Q06698
GermOnline:YLR419W Uniprot:Q06698
Length = 1435
Score = 253 (94.1 bits), Expect = 1.3e-25, Sum P(3) = 1.3e-25
Identities = 62/146 (42%), Positives = 83/146 (56%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
I+VFLPG IN + S N + F ++PLHS L QK +F G RK+V++
Sbjct: 866 IIVFLPGVGEINKCCNLLANKS--NEADFMVLPLHSALTPEDQKRVFKKY-HGKRKVVVS 922
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR----- 303
TNIAETSITIDD V +D G+ K ++ KDN L +IS A KQRRGRAGR
Sbjct: 923 TNIAETSITIDDCVATIDTGRAKSMFYNPKDNTTKLIESFISKAEVKQRRGRAGRVREGL 982
Query: 304 TLKRSETQQYPNDVLNMLKDPELEGV 329
+ K Y ND+++M PE++ +
Sbjct: 983 SYKLFSKNLYENDMISM-PIPEIKRI 1007
Score = 111 (44.1 bits), Expect = 1.3e-25, Sum P(3) = 1.3e-25
Identities = 19/77 (24%), Positives = 48/77 (62%)
Query: 8 KGLTHSVTSWETRQKLLNDPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLD 67
+ + +S + T+ + D + + ++E ++++S Y+ M R++LP+++ + ++D
Sbjct: 558 RSINNSSSRKFTKTTISEDTL--SVLREEYTKRIKSSEYKSMQLVREQLPAWKKQKVIID 615
Query: 68 MVRNNQITVISGETGSG 84
++ N++ +I+GETGSG
Sbjct: 616 IINKNEVVLITGETGSG 632
Score = 51 (23.0 bits), Expect = 1.3e-25, Sum P(3) = 1.3e-25
Identities = 16/56 (28%), Positives = 23/56 (41%)
Query: 373 FNSCLLYEFAMVDNKPKEIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHP 428
F + Y+ + P I V + L +IKELR +LD + KL P
Sbjct: 1354 FGGAISYDIGGTIHSPG--IVVDNWLPIRTWCKNGVLIKELRTQLDEAIRKKLESP 1407
Score = 37 (18.1 bits), Expect = 5.4e-18, Sum P(3) = 5.4e-18
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 18 ETRQKLLNDPVLDAAFKKEMI 38
ET +NDP D A K ++
Sbjct: 106 ETLTARMNDPTYDKASGKGLV 126
>DICTYBASE|DDB_G0275313 [details] [associations]
symbol:dhx9 "ATP-dependent RNA helicase"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 dictyBase:DDB_G0275313 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GenomeReviews:CM000151_GR EMBL:AAFI02000013
GO:GO:0003725 GO:GO:0004003 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 RefSeq:XP_643861.1 ProteinModelPortal:Q869Z1
EnsemblProtists:DDB0233740 GeneID:8619912 KEGG:ddi:DDB_G0275313
InParanoid:Q869Z1 OMA:CEYLLEN Uniprot:Q869Z1
Length = 1472
Score = 269 (99.8 bits), Expect = 1.5e-25, Sum P(3) = 1.5e-25
Identities = 53/119 (44%), Positives = 74/119 (62%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
IL+FLPGW+ I+ M + N + F I+PLHS + Q +F PP +RKIVL
Sbjct: 952 ILIFLPGWEDISQTRELMRRHPMLRNENEFLILPLHSSVSMQLQAKVFEKPPPKIRKIVL 1011
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLK 306
+TNIAETSITI+D+VYV+D K K+ + + ++ + W ++ KQRRGRAGR K
Sbjct: 1012 STNIAETSITINDVVYVIDSAKVKLKYHETQRDLTLFQTVWACKSSLKQRRGRAGRVRK 1070
Score = 98 (39.6 bits), Expect = 1.5e-25, Sum P(3) = 1.5e-25
Identities = 21/81 (25%), Positives = 44/81 (54%)
Query: 10 LTHSVTSWETRQKLLN----DPVLDAAFKKEMIR--KLQSRRYQEMLEARKKLPSYQMRD 63
L + ++ +Q LL+ + + D ++ K Q+ Y+ + + R +LP ++ R
Sbjct: 665 LNKKINTYTPQQTLLDVKSFEELSDIGIERRAYEHNKRQTAEYKRIYQKRTELPIFKQRS 724
Query: 64 AVLDMVRNNQITVISGETGSG 84
+++ ++NNQI +I G+TG G
Sbjct: 725 HLIESIKNNQIIIIMGDTGCG 745
Score = 83 (34.3 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 18/56 (32%), Positives = 31/56 (55%)
Query: 315 NDVLNMLKDPELEGVNNDVIFSLLQHICT---TQRPGAILVFLPGWDTINSLHRSM 367
ND +D + + V++++I L+ HI T + +IL+FLPGW+ I+ M
Sbjct: 914 NDPTISYRDEQSDDVDHEMILQLIVHIVTKVSSTSEDSILIFLPGWEDISQTRELM 969
Score = 45 (20.9 bits), Expect = 1.5e-25, Sum P(3) = 1.5e-25
Identities = 9/29 (31%), Positives = 17/29 (58%)
Query: 104 NDVLNMLKDPELEGVNNDVIFSLLQHICT 132
ND +D + + V++++I L+ HI T
Sbjct: 914 NDPTISYRDEQSDDVDHEMILQLIVHIVT 942
Score = 37 (18.1 bits), Expect = 2.8e-19, Sum P(3) = 2.8e-19
Identities = 8/34 (23%), Positives = 20/34 (58%)
Query: 47 QEMLEARKKLPSYQMRDAVLDMVRNNQITVISGE 80
+++L+ KK+ +Y + +LD+ +++ I E
Sbjct: 660 RKILQLNKKINTYTPQQTLLDVKSFEELSDIGIE 693
>UNIPROTKB|I3LRK0 [details] [associations]
symbol:I3LRK0 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 GO:GO:0004386
GeneTree:ENSGT00550000074257 EMBL:FP102731 EMBL:CU694750
Ensembl:ENSSSCT00000027140 Uniprot:I3LRK0
Length = 524
Score = 285 (105.4 bits), Expect = 1.8e-25, Sum P(2) = 1.8e-25
Identities = 59/118 (50%), Positives = 80/118 (67%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN---SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVFLPG I L+ + +S FN S+R + PLHS L + Q+++F PP GV KI
Sbjct: 44 ILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVVHPLHSSLSSEEQQAVFVKPPVGVTKI 103
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+++TNIAETSITIDD+VYV+D GK K +D + +L+ ++S ANA QR+GRAGR
Sbjct: 104 IISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGR 161
Score = 65 (27.9 bits), Expect = 1.8e-25, Sum P(2) = 1.8e-25
Identities = 25/90 (27%), Positives = 43/90 (47%)
Query: 362 SLHRSMCQSSFFN-SCLLYEFAMVDNKP--KEIITVRDCLSFECKP------STAKIIKE 412
++H+S +S F+ S LL N P K+++ + + + F P + A+++KE
Sbjct: 426 NIHQSTIFNSLFSQSKLLVIEEPFYNGPHLKKLLEILEKM-FSSPPMELRLTAVAELVKE 484
Query: 413 LRARLDMLLAHKLSHPGTTAWGDPNEGNIL 442
LR LD LL K+ +P P I+
Sbjct: 485 LRCELDQLLQDKIKNPSIDLCTCPRGSRII 514
>POMBASE|SPCC895.09c [details] [associations]
symbol:ucp12 "ATP-dependent RNA helicase Ucp12
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=ISS] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008150 "biological_process" evidence=ND] [GO:0043130
"ubiquitin binding" evidence=ISM] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR009060 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908
PROSITE:PS51194 SMART:SM00490 SMART:SM00591 SMART:SM00847
PomBase:SPCC895.09c GO:GO:0005829 GO:GO:0005524 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0003676 PROSITE:PS50030
InterPro:IPR016135 SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0043130 SUPFAM:SSF46934 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 PIR:T41647
RefSeq:NP_588050.1 ProteinModelPortal:O94536
EnsemblFungi:SPCC895.09c.1 GeneID:2539263 KEGG:spo:SPCC895.09c
HOGENOM:HOG000167651 OMA:GWARIGV OrthoDB:EOG4Z65WS NextBio:20800433
Uniprot:O94536
Length = 1327
Score = 259 (96.2 bits), Expect = 2.5e-25, Sum P(2) = 2.5e-25
Identities = 55/118 (46%), Positives = 79/118 (66%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPG ++++ R + + + S+F+++PLH+ L T Q+ F T + RKI+ A
Sbjct: 816 ILVFLPG---VSNIARCIREIKSKDGSKFEVLPLHASLNTSEQRRCFKTYTK--RKIICA 870
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLK 306
TNIAETSITIDD+V V+D G+ K ++DV+ ++ T K W S A +QRRGRAGR K
Sbjct: 871 TNIAETSITIDDVVAVIDSGRVKQIDYDVERDLVTFKETWASRAACQQRRGRAGRVKK 928
Score = 109 (43.4 bits), Expect = 2.5e-25, Sum P(2) = 2.5e-25
Identities = 19/45 (42%), Positives = 34/45 (75%)
Query: 40 KLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+++S YQ + R+KLP+++ R ++D ++++Q+ VISGETGSG
Sbjct: 561 RVKSPSYQLKVREREKLPAWESRRKIMDAIQHSQVVVISGETGSG 605
>UNIPROTKB|G4MR96 [details] [associations]
symbol:MGG_04709 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
EMBL:CM001231 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 RefSeq:XP_003710833.1
EnsemblFungi:MGG_04709T0 GeneID:2677908 KEGG:mgr:MGG_04709
Uniprot:G4MR96
Length = 1504
Score = 257 (95.5 bits), Expect = 2.7e-25, Sum P(3) = 2.7e-25
Identities = 57/115 (49%), Positives = 74/115 (64%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPG I +L+ + F + + + PLHS + T Q++ F PP G+RKIVLA
Sbjct: 970 ILVFLPGIAEIRTLNDLLLGDRSFQQN-WLVYPLHSTIATEEQEAAFLVPPHGMRKIVLA 1028
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAET ITI D+ V+D GK + FD + ++ L +IS ANAKQRRGRAGR
Sbjct: 1029 TNIAETGITIPDVTCVIDTGKHREMRFDERRQMSRLIDTFISRANAKQRRGRAGR 1083
Score = 105 (42.0 bits), Expect = 2.7e-25, Sum P(3) = 2.7e-25
Identities = 22/61 (36%), Positives = 32/61 (52%)
Query: 40 KLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHLDFITLKRSET 99
K S RYQ ML +R +LP + R+ VL V +Q+ ++ GETG G + L+
Sbjct: 675 KSSSPRYQNMLRSRMQLPMWAFREQVLSAVDQHQVVIVCGETGCGKSTQVPSFLLEHQLA 734
Query: 100 Q 100
Q
Sbjct: 735 Q 735
Score = 50 (22.7 bits), Expect = 2.7e-25, Sum P(3) = 2.7e-25
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 406 TAKIIKELRARLDMLLAHKLSHPG 429
T ++K LR+RL LL +PG
Sbjct: 1443 TVLVVKTLRSRLRELLTRSFKNPG 1466
>ZFIN|ZDB-GENE-070912-171 [details] [associations]
symbol:dhx9 "DEAH (Asp-Glu-Ala-His) box polypeptide
9" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 ZFIN:ZDB-GENE-070912-171
GO:GO:0005524 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247063
GeneTree:ENSGT00550000074257 HOVERGEN:HBG039429 OrthoDB:EOG4HHP1J
OMA:DDWIRLQ EMBL:BX571812 IPI:IPI00491874 UniGene:Dr.79297
SMR:B0S6Z1 Ensembl:ENSDART00000111661 Ensembl:ENSDART00000134918
Uniprot:B0S6Z1
Length = 1271
Score = 276 (102.2 bits), Expect = 3.5e-25, Sum P(4) = 3.5e-25
Identities = 53/121 (43%), Positives = 79/121 (65%)
Query: 185 LVVP--ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGV 242
L VP +LVFLPGW+ I + + + + F +++I+PLHS +P Q+ +F P+GV
Sbjct: 653 LEVPGAVLVFLPGWNLIYFMQKHLEMNPHFGGHQYRILPLHSQIPREEQRRVFEPVPDGV 712
Query: 243 RKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAG 302
K++L+TNIAETSITI+D+V+V+D K K+ F +N+ W S N +QR+GRAG
Sbjct: 713 TKVILSTNIAETSITINDVVFVLDSCKQKVKLFTSHNNMTNYATVWASKTNLEQRKGRAG 772
Query: 303 R 303
R
Sbjct: 773 R 773
Score = 77 (32.2 bits), Expect = 3.5e-25, Sum P(4) = 3.5e-25
Identities = 18/82 (21%), Positives = 40/82 (48%)
Query: 3 SPHSPKGLTHSVTSWETRQKLLNDPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMR 62
+P + + ++ T +++ ND + + ++ E Q + Q +L R +LP +
Sbjct: 347 NPWTSSNIDEGPLAFCTPEQISNDLLNELNYQLE-----QDQNLQTILTERSQLPVKNFQ 401
Query: 63 DAVLDMVRNNQITVISGETGSG 84
+ ++ + NN + +I G TG G
Sbjct: 402 EQIMSTIYNNPVVIIRGATGCG 423
Score = 50 (22.7 bits), Expect = 3.5e-25, Sum P(4) = 3.5e-25
Identities = 10/22 (45%), Positives = 18/22 (81%)
Query: 121 DVIFSLLQHICTTQRPGAILVY 142
++I +LL++I T + PGA+LV+
Sbjct: 641 ELIEALLKYIETLEVPGAVLVF 662
Score = 38 (18.4 bits), Expect = 3.5e-25, Sum P(4) = 3.5e-25
Identities = 14/61 (22%), Positives = 24/61 (39%)
Query: 390 EIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHPGTTAWGDPNEGNILHCCSGFS 449
E++ + D + + A + LRA L+ L+ P DP +L+ S
Sbjct: 1086 EVVELDDWIKLQIPHDVAAGVAGLRAGLEALVVEVTKDPEYIRNLDPLNERLLNVIRLVS 1145
Query: 450 R 450
R
Sbjct: 1146 R 1146
>UNIPROTKB|Q68FK8 [details] [associations]
symbol:dhx9 "ATP-dependent RNA helicase A-like protein"
species:8355 "Xenopus laevis" [GO:0070937 "CRD-mediated mRNA
stability complex" evidence=ISS] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 Gene3D:3.30.160.20
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:1660
HOVERGEN:HBG039429 KO:K13184 GO:GO:0070937 EMBL:BC079701
RefSeq:NP_001087383.1 UniGene:Xl.55621 ProteinModelPortal:Q68FK8
SMR:Q68FK8 PRIDE:Q68FK8 GeneID:447207 KEGG:xla:447207
Xenbase:XB-GENE-967780 Uniprot:Q68FK8
Length = 1262
Score = 280 (103.6 bits), Expect = 4.1e-25, Sum P(4) = 4.1e-25
Identities = 54/121 (44%), Positives = 80/121 (66%)
Query: 185 LVVP--ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGV 242
L VP +LVFLPGW+ I ++ + + + F S + I+PLHS +P Q+ +F+ P+G+
Sbjct: 649 LNVPGAVLVFLPGWNLIYAMQKHLEMNPHFGSHSYCILPLHSQIPRDEQRKVFDPVPDGI 708
Query: 243 RKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAG 302
K++L+TNIAETSITI+D+VYV+D K K+ F +N+ W S N +QR+GRAG
Sbjct: 709 IKVILSTNIAETSITINDVVYVIDSCKQKVKLFTSHNNMTNYATVWASKTNLEQRKGRAG 768
Query: 303 R 303
R
Sbjct: 769 R 769
Score = 71 (30.1 bits), Expect = 4.1e-25, Sum P(4) = 4.1e-25
Identities = 14/51 (27%), Positives = 27/51 (52%)
Query: 34 KKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
K E + +Q +++L R+ LP + + ++ V N+ + +I G TG G
Sbjct: 368 KNEHMYHIQDPNIKQVLIDRESLPVKKFEEEIMHAVHNSPVVIIRGATGCG 418
Score = 48 (22.0 bits), Expect = 4.1e-25, Sum P(4) = 4.1e-25
Identities = 10/22 (45%), Positives = 17/22 (77%)
Query: 121 DVIFSLLQHICTTQRPGAILVY 142
++I +LL++I T PGA+LV+
Sbjct: 637 ELIEALLKYIETLNVPGAVLVF 658
Score = 40 (19.1 bits), Expect = 4.1e-25, Sum P(4) = 4.1e-25
Identities = 14/50 (28%), Positives = 20/50 (40%)
Query: 390 EIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLSHPGTTAWGDP-NE 438
E I + D + + I LRA L+ L+ P + DP NE
Sbjct: 1082 EFIHLDDWIKLSMAHEESACITALRAALEALVVEVTKEPEILSQLDPVNE 1131
>UNIPROTKB|H7C109 [details] [associations]
symbol:DHX57 "Putative ATP-dependent RNA helicase DHX57"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
GO:GO:0004386 EMBL:AC018693 InterPro:IPR011709 Pfam:PF07717
HGNC:HGNC:20086 ChiTaRS:DHX57 Ensembl:ENST00000452978
Uniprot:H7C109
Length = 665
Score = 287 (106.1 bits), Expect = 1.0e-24, Sum P(2) = 1.0e-24
Identities = 60/118 (50%), Positives = 80/118 (67%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN---SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVFLPG I L+ + +S FN S+R I PLHS L + Q+++F PP GV KI
Sbjct: 174 ILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLHSSLSSEEQQAVFVKPPAGVTKI 233
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+++TNIAETSITIDD+VYV+D GK K +D + +L+ ++S ANA QR+GRAGR
Sbjct: 234 IISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGR 291
Score = 61 (26.5 bits), Expect = 1.0e-24, Sum P(2) = 1.0e-24
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 407 AKIIKELRARLDMLLAHKLSHPGTTAWGDPNEGNIL 442
A+++KELR LD LL K+ +P P I+
Sbjct: 620 AELVKELRCELDQLLQDKIKNPSIDLCTCPRGSRII 655
>ZFIN|ZDB-GENE-061207-30 [details] [associations]
symbol:dhx34 "DEAH (Asp-Glu-Ala-His) box polypeptide
34" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IMP] [GO:0009790 "embryo
development" evidence=IMP] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR015880
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00355
SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-061207-30 GO:GO:0005524
GO:GO:0000184 GO:GO:0008270 GO:GO:0003676 GO:GO:0005622
GO:GO:0009790 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
CTD:9704 HOGENOM:HOG000232193 OMA:DSDQVFH OrthoDB:EOG4GB75B
GeneTree:ENSGT00700000104421 HOVERGEN:HBG051355 EMBL:BX908775
IPI:IPI00503372 RefSeq:NP_001121805.1 UniGene:Dr.50626
Ensembl:ENSDART00000086943 GeneID:555838 KEGG:dre:555838
InParanoid:A2BIE5 NextBio:20881188 Uniprot:A2BIE5
Length = 1150
Score = 262 (97.3 bits), Expect = 1.9e-23, Sum P(2) = 1.9e-23
Identities = 52/116 (44%), Positives = 79/116 (68%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+L+FL G I+++ + CQ+ ++ R+ ++PLHS L Q +F+ P GVRK +++
Sbjct: 381 LLLFLSGVAEISTIQEA-CQTYATHTQRWIVLPLHSTLSLAQQDKVFDIAPPGVRKCIIS 439
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT 304
TNIAETS+TID + +VVD GK K +FD K + L+ WIS A+++QR+GRAGRT
Sbjct: 440 TNIAETSVTIDGVRFVVDSGKVKEMSFDPKAKMQRLQEFWISRASSEQRKGRAGRT 495
Score = 86 (35.3 bits), Expect = 1.9e-23, Sum P(2) = 1.9e-23
Identities = 14/46 (30%), Positives = 29/46 (63%)
Query: 39 RKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+K + ++ +K LP +Q RD ++++VR + + V++G+TG G
Sbjct: 145 QKQSFSKLSKLRREQKSLPIFQYRDKIVELVRTHPVVVVAGDTGCG 190
>WB|WBGene00004355 [details] [associations]
symbol:rha-1 species:6239 "Caenorhabditis elegans"
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000003 "reproduction"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0007281 "germ cell development"
evidence=IMP] [GO:0045814 "negative regulation of gene expression,
epigenetic" evidence=IMP] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 GO:GO:0005524 GO:GO:0005634
GO:GO:0009792 GO:GO:0051301 GO:GO:0007067 GO:GO:0006355
GO:GO:0003677 Gene3D:3.30.160.20 GO:GO:0006351 GO:GO:0007281
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000247063 GeneTree:ENSGT00550000074257 KO:K13184
EMBL:Z50071 PIR:T24664 RefSeq:NP_495890.2 ProteinModelPortal:Q22307
SMR:Q22307 STRING:Q22307 PaxDb:Q22307 EnsemblMetazoa:T07D4.3.1
EnsemblMetazoa:T07D4.3.2 GeneID:174417 KEGG:cel:CELE_T07D4.3
UCSC:T07D4.3 CTD:174417 WormBase:T07D4.3 InParanoid:Q22307
OMA:DDWIRLQ NextBio:883938 GO:GO:0045814 Uniprot:Q22307
Length = 1301
Score = 267 (99.0 bits), Expect = 2.4e-23, Sum P(3) = 2.4e-23
Identities = 55/116 (47%), Positives = 76/116 (65%)
Query: 189 ILVFLPGWDTINSL-HRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
+LVFLPGW I +L +R + F +++++I+PLHS L + Q+ +FN P G RKI++
Sbjct: 662 VLVFLPGWAEIMTLCNRLLEHQEFGQANKYEILPLHSQLTSQEQRKVFNHYP-GKRKIIV 720
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+TNIAETSITIDD+VYV+D K K + +N+ W S N QRRGRAGR
Sbjct: 721 STNIAETSITIDDVVYVIDSCKAKERMYTSNNNMVHFATVWASKTNVIQRRGRAGR 776
Score = 73 (30.8 bits), Expect = 2.4e-23, Sum P(3) = 2.4e-23
Identities = 14/32 (43%), Positives = 21/32 (65%)
Query: 53 RKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
R +LP Q R+ ++ V N++T+I GETG G
Sbjct: 378 RGELPVAQYRENIVQTVAENRVTLIKGETGCG 409
Score = 49 (22.3 bits), Expect = 2.4e-23, Sum P(3) = 2.4e-23
Identities = 20/97 (20%), Positives = 43/97 (44%)
Query: 347 PGAILVFLPGWDTINSLHRSMCQSSFFNSCLLYEFAM--VDNKPKEIITVRDCLSFECKP 404
P +LVF + + + S Q S ++ L F V+ + ++ + + ++
Sbjct: 1054 PSPLLVFT---EKVRTRCISCKQMSVISAIQLLVFGSRKVECVGEGLVRIDETITIRMNV 1110
Query: 405 STAKIIKELRARLDMLLAHKLSHPGTTAWGDPNEGNI 441
STA + LR ++ LL +P + A +P++ +
Sbjct: 1111 STAAALIGLRPCIEALLVKSCENPESLAGLNPSDAEL 1147
>FB|FBgn0030833 [details] [associations]
symbol:CG8915 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS51061 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:AE014298 GO:GO:0006200
GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00680000101018 FlyBase:FBgn0030833 EMBL:BT133099
RefSeq:NP_573208.1 SMR:Q9VX63 IntAct:Q9VX63 MINT:MINT-762262
EnsemblMetazoa:FBtr0074447 GeneID:32715 KEGG:dme:Dmel_CG8915
UCSC:CG8915-RA InParanoid:Q9VX63 OMA:WISQADA GenomeRNAi:32715
NextBio:779983 Uniprot:Q9VX63
Length = 976
Score = 244 (91.0 bits), Expect = 8.4e-23, Sum P(2) = 8.4e-23
Identities = 62/151 (41%), Positives = 88/151 (58%)
Query: 180 LLRSMLVVPILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPP 239
LLR ++V+LPG+ + SL + +SS + II LHS + Q+ +F T P
Sbjct: 454 LLRQGDAGAVIVYLPGYSDMTSLLARL-ESSL-PREQITIILLHSQVDNSEQRKVFRTYP 511
Query: 240 EGVR-KIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRR 298
GVR KI+L+TNI +TSITI D++YV+D G KM +D + + L WIS A+AKQR
Sbjct: 512 -GVRLKIILSTNIGQTSITIPDLLYVIDTGLAKMKTYDSTIDASQLTLTWISQADAKQRA 570
Query: 299 GRAGRTLKRSETQQYPNDVL---NMLKDPEL 326
GRAGR + + Y ND + N+ PE+
Sbjct: 571 GRAGRVCHGNCYRLYDNDRMARMNLYTIPEI 601
Score = 98 (39.6 bits), Expect = 8.4e-23, Sum P(2) = 8.4e-23
Identities = 20/69 (28%), Positives = 39/69 (56%)
Query: 35 KEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHLDFITL 94
+ +I QS R + + R+ LP Y+ R+++L++++ +Q+ +I G TGSG L L
Sbjct: 188 QRLIPPPQSNRNRNIQHERRSLPIYKQRESILNVLQRDQVLIIKGATGSGKSTQLPQYIL 247
Query: 95 KRSETQQYP 103
+ + + P
Sbjct: 248 EWAAEHRAP 256
Score = 74 (31.1 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 14/35 (40%), Positives = 24/35 (68%)
Query: 329 VNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSL 363
++ND+I SLL+ + GA++V+LPG+ + SL
Sbjct: 442 IDNDLIVSLLELLLRQGDAGAVIVYLPGYSDMTSL 476
Score = 53 (23.7 bits), Expect = 4.1e-18, Sum P(2) = 4.1e-18
Identities = 36/150 (24%), Positives = 69/150 (46%)
Query: 8 KGLTHSVTSWETRQKLLNDPVLDAAFKKEMIRKLQSRRYQEMLEAR---KKLPSYQMRDA 64
K TH + E ++ L+ L A K E+ + R ++ A + L +Y
Sbjct: 325 KNTTHLIID-EAHERDLDTDFLLLATKLELQKNPHLRLV--LMSATMDLEALSNYFGGGT 381
Query: 65 VLDMV-RNNQITV-----ISGETGSGPPLHLDFITLKRSETQQYPNDVL------NMLKD 112
V+D+ R+ ++++ I +TG P F L + ++ P+++L N +
Sbjct: 382 VMDVEGRSFEVSIYHLEDILSKTGYMHPRMEKF--LGKPTGKETPSELLAAYYGGNTIVH 439
Query: 113 PELEGVNNDVIFSLLQHICTTQRPGAILVY 142
P+++ ND+I SLL+ + GA++VY
Sbjct: 440 PDID---NDLIVSLLELLLRQGDAGAVIVY 466
>WB|WBGene00009922 [details] [associations]
symbol:F52B5.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] InterPro:IPR001374 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF01424 Pfam:PF04408 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00393 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0009792 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:Z75541
PIR:T22493 RefSeq:NP_492260.1 ProteinModelPortal:Q20644 SMR:Q20644
STRING:Q20644 PaxDb:Q20644 EnsemblMetazoa:F52B5.3 GeneID:172615
KEGG:cel:CELE_F52B5.3 UCSC:F52B5.3 CTD:172615 WormBase:F52B5.3
InParanoid:Q20644 OMA:NSMPETQ NextBio:876269 Uniprot:Q20644
Length = 1425
Score = 273 (101.2 bits), Expect = 1.3e-22, Sum P(2) = 1.3e-22
Identities = 57/154 (37%), Positives = 93/154 (60%)
Query: 189 ILVFLPGWDTINSLHRSM-C-QSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIV 246
ILVFLPG++ I + +++ C ++S N ++PLHS + +++ IF + P+ RKI+
Sbjct: 647 ILVFLPGYEDIQQMLKAIDCWKNSLKNMKNVIVLPLHSQMTSINHGDIFKSVPKDTRKII 706
Query: 247 LATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLK 306
LATNIAE SITI+D+++VVD GK K +FD + ++TL + I+ +NA QR GRAGR
Sbjct: 707 LATNIAEASITIEDVIFVVDTGKVKEKSFDHEAKLSTLTVKPIARSNADQRSGRAGRVAN 766
Query: 307 RSETQQYPNDVLNMLKDPELEGVNNDVIFSLLQH 340
+ Y N + + ++ + I+ + H
Sbjct: 767 GYCIRLYTEQEYNSMPETQIAEMKRAAIYDVTLH 800
Score = 68 (29.0 bits), Expect = 1.3e-22, Sum P(2) = 1.3e-22
Identities = 18/67 (26%), Positives = 34/67 (50%)
Query: 37 MIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHL-DFITLK 95
M+ +S+ +E+ + R LP+ + D VL + + + +ISG TG G + FI +
Sbjct: 162 MVIPPKSKCSKELQKVRNSLPASKYCDQVLKSISSCNVVIISGGTGCGKTTQVPQFILDE 221
Query: 96 RSETQQY 102
E ++
Sbjct: 222 AHENNKH 228
>ZFIN|ZDB-GENE-040426-1144 [details] [associations]
symbol:dhx38 "DEAH (Asp-Glu-Ala-His) box
polypeptide 38" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-040426-1144 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
HOVERGEN:HBG039428 KO:K12815 CTD:9785 OrthoDB:EOG4Z62MS
EMBL:BC063744 IPI:IPI00493120 RefSeq:NP_957170.1 UniGene:Dr.38854
ProteinModelPortal:Q6P404 STRING:Q6P404 PRIDE:Q6P404 GeneID:393850
KEGG:dre:393850 NextBio:20814835 ArrayExpress:Q6P404 Bgee:Q6P404
Uniprot:Q6P404
Length = 1258
Score = 249 (92.7 bits), Expect = 1.5e-22, Sum P(2) = 1.5e-22
Identities = 81/274 (29%), Positives = 138/274 (50%)
Query: 93 TLKRSETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVYCTYT------ 146
+L+ S+ Y +++ + L N DV+F LL+ + ++R L+ + T
Sbjct: 668 SLRESDLDHYSAVIMDEAHERSL---NTDVLFGLLREV-VSRRSDLKLIVTSATMDSDKF 723
Query: 147 --FMG----------VSPMKVFFCKNVLQRLMKGVGANSPKRWVKLLRSMLVVPILVFLP 194
F G P+ + F K + ++ + K+ +++ S +V IL+F+P
Sbjct: 724 ASFFGNVPIFHIPGRTFPVDILFSKTPQEDYVEA----AVKQALQIHLSGMVGDILIFMP 779
Query: 195 GWDTINSLHRSMCQ--SSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLATNIA 252
G + I + + + N+ ++P++S LP+ Q IF P+GVRK ++ATNIA
Sbjct: 780 GQEDIEVTSDQIVERLADLENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIA 839
Query: 253 ETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT----LKRS 308
ETS+T+D I++VVD G K+ F+ + + L+ IS ANA QR GRAGRT R
Sbjct: 840 ETSLTVDGIMFVVDSGYCKLKVFNPRIGMDALQVYPISQANANQRAGRAGRTGPGQCYRL 899
Query: 309 ETQQ-YPNDVLNMLKDPELEGVNNDVIFSLLQHI 341
TQ + N++L PE++ N + LL+ +
Sbjct: 900 YTQSAFKNEMLTTTI-PEIQRTNLANVVLLLKSL 932
Score = 93 (37.8 bits), Expect = 1.5e-22, Sum P(2) = 1.5e-22
Identities = 17/41 (41%), Positives = 28/41 (68%)
Query: 49 MLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHL 89
+LE R+ LP + +R +L+++R+N I ++ GETGSG L
Sbjct: 556 LLEQRQYLPIFAVRQQLLNIIRDNNIVIVVGETGSGKTTQL 596
>UNIPROTKB|F1S3A8 [details] [associations]
symbol:DHX38 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104877 EMBL:CU914723
Ensembl:ENSSSCT00000003045 OMA:IATIPEI Uniprot:F1S3A8
Length = 766
Score = 241 (89.9 bits), Expect = 2.9e-22, Sum P(2) = 2.9e-22
Identities = 60/160 (37%), Positives = 91/160 (56%)
Query: 189 ILVFLPGWDTINSLHRSMCQ--SSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIV 246
IL+F+PG + I + + N+ ++P++S LP+ Q IF P+GVRK +
Sbjct: 282 ILIFMPGQEDIEVTSDQIVEHLEELENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCI 341
Query: 247 LATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT-- 304
+ATNIAETS+T+D I++V+D G K+ F+ + + L+ IS ANA QR GRAGRT
Sbjct: 342 VATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGP 401
Query: 305 --LKRSETQQ-YPNDVLNMLKDPELEGVNNDVIFSLLQHI 341
R TQ Y N++L PE++ N + LL+ +
Sbjct: 402 GQCFRLYTQSAYKNELLTTTV-PEIQRTNLANVVLLLKSL 440
Score = 93 (37.8 bits), Expect = 2.9e-22, Sum P(2) = 2.9e-22
Identities = 26/91 (28%), Positives = 44/91 (48%)
Query: 1 MKSPHSP-KGLTHS-VTSWETRQKLLNDPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPS 58
+K P K LT + T QK + KK+ + + + +LE R+ LP
Sbjct: 20 VKKEEEPDKALTEDGKVDYRTEQKFADH------MKKKSEASSEFAKKKSILEQRQYLPI 73
Query: 59 YQMRDAVLDMVRNNQITVISGETGSGPPLHL 89
+ ++ +L ++R+N I ++ GETGSG L
Sbjct: 74 FAVQQELLTIIRDNSIVIVVGETGSGKTTQL 104
>CGD|CAL0002969 [details] [associations]
symbol:orf19.107 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0002969 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K14781 EMBL:AACQ01000106 RefSeq:XP_714316.1
GeneID:3644014 KEGG:cal:CaO19.107 Uniprot:Q59XP9
Length = 831
Score = 218 (81.8 bits), Expect = 4.8e-22, Sum P(3) = 4.8e-22
Identities = 58/154 (37%), Positives = 84/154 (54%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQII---PLHSMLPTVSQKSIFNTPPEGVRKI 245
+L FLPG + I++ +S+ Q + +I PL++ L Q IF P+G RK+
Sbjct: 392 VLCFLPGQEEIDNCVKSLEQLAPQLPREAPLIVPLPLYAALSPGQQSKIFEKLPKGRRKV 451
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTL 305
+LATNIAETSIT+ + YV+D G K+ + ++TL IS A+A+QR GRAGR
Sbjct: 452 ILATNIAETSITVSGVKYVIDSGLRKIKVWKHNLGLSTLLTTPISQASARQRAGRAGRES 511
Query: 306 KRSETQQYPNDVLNML-KDPELEGVNNDVIFSLL 338
+ + YP L K E E ND+I +L
Sbjct: 512 EGKVFRLYPESTYMALPKQQESEIKRNDIILPVL 545
Score = 116 (45.9 bits), Expect = 4.8e-22, Sum P(3) = 4.8e-22
Identities = 18/38 (47%), Positives = 30/38 (78%)
Query: 47 QEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
Q++L+ R+KLP Y +D +++ + NNQ+T++ GETGSG
Sbjct: 173 QQLLQIREKLPIYHHKDKIIEYINNNQVTIVIGETGSG 210
Score = 66 (28.3 bits), Expect = 1.5e-05, Sum P(3) = 1.5e-05
Identities = 20/61 (32%), Positives = 33/61 (54%)
Query: 309 ETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMC 368
E + YP V D E E + + +I S++Q I + G +L FLPG + I++ +S+
Sbjct: 354 EGKMYP--VSQFYLDAESEDIVDTMIRSIIQ-INLNEPEGDVLCFLPGQEEIDNCVKSLE 410
Query: 369 Q 369
Q
Sbjct: 411 Q 411
Score = 42 (19.8 bits), Expect = 4.8e-22, Sum P(3) = 4.8e-22
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 427 HPGTTAWGDPNEGNILH 443
HP +T +G PN I++
Sbjct: 776 HPSSTLFGKPNMDAIMY 792
>WB|WBGene00003392 [details] [associations]
symbol:mog-4 species:6239 "Caenorhabditis elegans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0018996
"molting cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0040020 "regulation of meiosis" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0007281 "germ cell development" evidence=IMP] [GO:0048589
"developmental growth" evidence=IMP] [GO:0010172 "embryonic body
morphogenesis" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001482 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF00437
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0002119 GO:GO:0008380 GO:GO:0006810 GO:GO:0018996
GO:GO:0006397 GO:GO:0003676 GO:GO:0042127 GO:GO:0040035
GO:GO:0007281 GO:GO:0048589 GO:GO:0010172 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0040022 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12813 EMBL:AF286900 EMBL:Z81462
EMBL:Z81457 PIR:T18832 RefSeq:NP_497027.1 UniGene:Cel.17139
ProteinModelPortal:O45244 SMR:O45244 DIP:DIP-24771N IntAct:O45244
MINT:MINT-1105817 STRING:O45244 PaxDb:O45244 EnsemblMetazoa:C04H5.6
GeneID:175117 KEGG:cel:CELE_C04H5.6 UCSC:C04H5.6 CTD:175117
WormBase:C04H5.6 GeneTree:ENSGT00700000104241 InParanoid:O45244
OMA:GTLHREF NextBio:886834 ArrayExpress:O45244 Uniprot:O45244
Length = 1008
Score = 230 (86.0 bits), Expect = 5.4e-22, Sum P(2) = 5.4e-22
Identities = 54/119 (45%), Positives = 75/119 (63%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRF-QIIPL--HSMLPTVSQKSIFNTPPEGVRKI 245
ILVFL G + I ++ ++ + S S+ ++IPL ++ LP+ Q IF P+ RK+
Sbjct: 577 ILVFLTGQEEIETVQEALMERSKALGSKIKELIPLPVYANLPSDLQAKIFEPTPKDARKV 636
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT 304
VLATNIAETS+TID I YV+D G +K ++FD + + L IS A A QR GRAGRT
Sbjct: 637 VLATNIAETSVTIDGINYVIDPGFSKQNSFDARSGVEHLHVVTISKAAANQRAGRAGRT 695
Score = 106 (42.4 bits), Expect = 5.4e-22, Sum P(2) = 5.4e-22
Identities = 20/55 (36%), Positives = 32/55 (58%)
Query: 35 KEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHL 89
+E++ ++ + E RK LP Y RDA ++ V+ +Q+ +I GETGSG L
Sbjct: 343 EEVVETEAEKKKMSIEETRKSLPVYAFRDAFIEAVKEHQVLIIEGETGSGKTTQL 397
Score = 67 (28.6 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 17/61 (27%), Positives = 34/61 (55%)
Query: 311 QQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQS 370
+++P D+ + PE + V+ ++ + H+ T PG ILVFL G + I ++ ++ +
Sbjct: 540 RRFPVDIY-YTQAPEADYVDAAIVTIMQIHL-TQPLPGDILVFLTGQEEIETVQEALMER 597
Query: 371 S 371
S
Sbjct: 598 S 598
Score = 48 (22.0 bits), Expect = 6.0e-16, Sum P(2) = 6.0e-16
Identities = 30/133 (22%), Positives = 57/133 (42%)
Query: 19 TRQKLLNDPVLDAAFKKEMIRKLQSRRYQEML--EARKK-LPSYQMRDAVLDMVR--NNQ 73
T +K + + D +E + + Y M+ EA ++ L + + V D+ R +
Sbjct: 452 TSEKTVLKYMTDGMLLREFLNEPDLASYSVMMIDEAHERTLHTDILFGLVKDIARFRKDL 511
Query: 74 ITVISGETGSGPPLH--LDFITLKRSETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC 131
+IS T D + R +++P D+ + PE + V+ ++ + H+
Sbjct: 512 KLLISSATLDAEKFSSFFDDAPIFRIPGRRFPVDIY-YTQAPEADYVDAAIVTIMQIHL- 569
Query: 132 TTQRPGAILVYCT 144
T PG ILV+ T
Sbjct: 570 TQPLPGDILVFLT 582
>UNIPROTKB|O45244 [details] [associations]
symbol:mog-4 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-4" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001482 InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF00437 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0009792 GO:GO:0002119
GO:GO:0008380 GO:GO:0006810 GO:GO:0018996 GO:GO:0006397
GO:GO:0003676 GO:GO:0042127 GO:GO:0040035 GO:GO:0007281
GO:GO:0048589 GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0040022 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 EMBL:AF286900 EMBL:Z81462 EMBL:Z81457 PIR:T18832
RefSeq:NP_497027.1 UniGene:Cel.17139 ProteinModelPortal:O45244
SMR:O45244 DIP:DIP-24771N IntAct:O45244 MINT:MINT-1105817
STRING:O45244 PaxDb:O45244 EnsemblMetazoa:C04H5.6 GeneID:175117
KEGG:cel:CELE_C04H5.6 UCSC:C04H5.6 CTD:175117 WormBase:C04H5.6
GeneTree:ENSGT00700000104241 InParanoid:O45244 OMA:GTLHREF
NextBio:886834 ArrayExpress:O45244 Uniprot:O45244
Length = 1008
Score = 230 (86.0 bits), Expect = 5.4e-22, Sum P(2) = 5.4e-22
Identities = 54/119 (45%), Positives = 75/119 (63%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRF-QIIPL--HSMLPTVSQKSIFNTPPEGVRKI 245
ILVFL G + I ++ ++ + S S+ ++IPL ++ LP+ Q IF P+ RK+
Sbjct: 577 ILVFLTGQEEIETVQEALMERSKALGSKIKELIPLPVYANLPSDLQAKIFEPTPKDARKV 636
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT 304
VLATNIAETS+TID I YV+D G +K ++FD + + L IS A A QR GRAGRT
Sbjct: 637 VLATNIAETSVTIDGINYVIDPGFSKQNSFDARSGVEHLHVVTISKAAANQRAGRAGRT 695
Score = 106 (42.4 bits), Expect = 5.4e-22, Sum P(2) = 5.4e-22
Identities = 20/55 (36%), Positives = 32/55 (58%)
Query: 35 KEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHL 89
+E++ ++ + E RK LP Y RDA ++ V+ +Q+ +I GETGSG L
Sbjct: 343 EEVVETEAEKKKMSIEETRKSLPVYAFRDAFIEAVKEHQVLIIEGETGSGKTTQL 397
Score = 67 (28.6 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 17/61 (27%), Positives = 34/61 (55%)
Query: 311 QQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWDTINSLHRSMCQS 370
+++P D+ + PE + V+ ++ + H+ T PG ILVFL G + I ++ ++ +
Sbjct: 540 RRFPVDIY-YTQAPEADYVDAAIVTIMQIHL-TQPLPGDILVFLTGQEEIETVQEALMER 597
Query: 371 S 371
S
Sbjct: 598 S 598
Score = 48 (22.0 bits), Expect = 6.0e-16, Sum P(2) = 6.0e-16
Identities = 30/133 (22%), Positives = 57/133 (42%)
Query: 19 TRQKLLNDPVLDAAFKKEMIRKLQSRRYQEML--EARKK-LPSYQMRDAVLDMVR--NNQ 73
T +K + + D +E + + Y M+ EA ++ L + + V D+ R +
Sbjct: 452 TSEKTVLKYMTDGMLLREFLNEPDLASYSVMMIDEAHERTLHTDILFGLVKDIARFRKDL 511
Query: 74 ITVISGETGSGPPLH--LDFITLKRSETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC 131
+IS T D + R +++P D+ + PE + V+ ++ + H+
Sbjct: 512 KLLISSATLDAEKFSSFFDDAPIFRIPGRRFPVDIY-YTQAPEADYVDAAIVTIMQIHL- 569
Query: 132 TTQRPGAILVYCT 144
T PG ILV+ T
Sbjct: 570 TQPLPGDILVFLT 582
>GENEDB_PFALCIPARUM|PF10_0294 [details] [associations]
symbol:PF10_0294 "RNA helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0008380 "RNA splicing"
evidence=ISS] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008380 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:AE014185 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
HSSP:P05055 RefSeq:XP_001347578.1 ProteinModelPortal:Q8IJA4
IntAct:Q8IJA4 MINT:MINT-1724156 EnsemblProtists:PF10_0294:mRNA
GeneID:810451 KEGG:pfa:PF10_0294 EuPathDB:PlasmoDB:PF3D7_1030100
OMA:HRHSKEH ProtClustDB:CLSZ2433181 Uniprot:Q8IJA4
Length = 1290
Score = 255 (94.8 bits), Expect = 5.8e-22, Sum P(2) = 5.8e-22
Identities = 68/160 (42%), Positives = 92/160 (57%)
Query: 189 ILVFLPGWDTINS----LHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRK 244
ILVFL G D IN+ LH M + + I+P++S LP+ Q IF P G RK
Sbjct: 842 ILVFLTGQDEINTACEILHERMKKLESMSPPPLIILPIYSSLPSEMQSVIFEPAPPGCRK 901
Query: 245 IVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT 304
+LATNIAE S+TID I +V+D G K+ +D K ++ +L IS ANAKQR GRAGRT
Sbjct: 902 CILATNIAEASLTIDGIFFVIDPGFCKIKKYDSKRDMDSLIVAPISKANAKQRAGRAGRT 961
Query: 305 ----LKRSETQQ-YPNDVLNMLKDPELEGVNNDVIFSLLQ 339
R T++ Y N++ M PE++ +N I LL+
Sbjct: 962 GPGKCYRLYTEEAYKNEMSEM-SVPEIQRINLGSIVLLLK 1000
Score = 81 (33.6 bits), Expect = 5.8e-22, Sum P(2) = 5.8e-22
Identities = 13/34 (38%), Positives = 22/34 (64%)
Query: 51 EARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
E R KLP Y +++ ++ + N + ++ GETGSG
Sbjct: 626 EQRSKLPIYNLKNDLMKAIEKNNVLIVIGETGSG 659
>UNIPROTKB|Q8IJA4 [details] [associations]
symbol:PF10_0294 "RNA helicase, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008380 "RNA splicing" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008380 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:AE014185 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
HSSP:P05055 RefSeq:XP_001347578.1 ProteinModelPortal:Q8IJA4
IntAct:Q8IJA4 MINT:MINT-1724156 EnsemblProtists:PF10_0294:mRNA
GeneID:810451 KEGG:pfa:PF10_0294 EuPathDB:PlasmoDB:PF3D7_1030100
OMA:HRHSKEH ProtClustDB:CLSZ2433181 Uniprot:Q8IJA4
Length = 1290
Score = 255 (94.8 bits), Expect = 5.8e-22, Sum P(2) = 5.8e-22
Identities = 68/160 (42%), Positives = 92/160 (57%)
Query: 189 ILVFLPGWDTINS----LHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRK 244
ILVFL G D IN+ LH M + + I+P++S LP+ Q IF P G RK
Sbjct: 842 ILVFLTGQDEINTACEILHERMKKLESMSPPPLIILPIYSSLPSEMQSVIFEPAPPGCRK 901
Query: 245 IVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT 304
+LATNIAE S+TID I +V+D G K+ +D K ++ +L IS ANAKQR GRAGRT
Sbjct: 902 CILATNIAEASLTIDGIFFVIDPGFCKIKKYDSKRDMDSLIVAPISKANAKQRAGRAGRT 961
Query: 305 ----LKRSETQQ-YPNDVLNMLKDPELEGVNNDVIFSLLQ 339
R T++ Y N++ M PE++ +N I LL+
Sbjct: 962 GPGKCYRLYTEEAYKNEMSEM-SVPEIQRINLGSIVLLLK 1000
Score = 81 (33.6 bits), Expect = 5.8e-22, Sum P(2) = 5.8e-22
Identities = 13/34 (38%), Positives = 22/34 (64%)
Query: 51 EARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
E R KLP Y +++ ++ + N + ++ GETGSG
Sbjct: 626 EQRSKLPIYNLKNDLMKAIEKNNVLIVIGETGSG 659
>UNIPROTKB|F1RLY9 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00355 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:9704 OMA:DSDQVFH GeneTree:ENSGT00700000104421
EMBL:FP102420 RefSeq:XP_003127294.1 Ensembl:ENSSSCT00000003454
GeneID:100515780 KEGG:ssc:100515780 Uniprot:F1RLY9
Length = 1146
Score = 258 (95.9 bits), Expect = 6.2e-22, Sum P(2) = 6.2e-22
Identities = 54/116 (46%), Positives = 77/116 (66%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFL G I ++ + Q+ S R+ ++PLHS L +Q +F+ P GVRK +L+
Sbjct: 381 LLVFLSGLAEIGAVLEA-AQAHARRSGRWVVLPLHSTLSVAAQDKVFDVAPPGVRKCILS 439
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT 304
TNIAETS+TID I +VVD GK K ++D + + L+ WIS A+A+QR+GRAGRT
Sbjct: 440 TNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAGRT 495
Score = 76 (31.8 bits), Expect = 6.2e-22, Sum P(2) = 6.2e-22
Identities = 14/40 (35%), Positives = 23/40 (57%)
Query: 45 RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
R + R LP Q RD +L ++ +Q+ V++G+TG G
Sbjct: 151 RLARLQRERAALPISQYRDRILQTLKEHQVVVVAGDTGCG 190
>TAIR|locus:2062492 [details] [associations]
symbol:MEE29 "maternal effect embryo arrest 29"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009793 "embryo development ending in
seed dormancy" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CP002685 GO:GO:0003676 GO:GO:0009793
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 OMA:RIDDHRD IPI:IPI00520097
RefSeq:NP_181077.3 UniGene:At.53041 ProteinModelPortal:F4IJV4
SMR:F4IJV4 PRIDE:F4IJV4 EnsemblPlants:AT2G35340.1 GeneID:818101
KEGG:ath:AT2G35340 Uniprot:F4IJV4
Length = 1044
Score = 239 (89.2 bits), Expect = 1.0e-21, Sum P(2) = 1.0e-21
Identities = 63/157 (40%), Positives = 92/157 (58%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQ---IIPLHSMLPTVSQKSIFNTPPEGVRKI 245
+LVFLPG + I ++ ++ ++ + I P+++ LP+ Q IF PEG RK+
Sbjct: 615 VLVFLPGQEEIEAVEENLKHKIRGLGTKIRELIICPIYANLPSELQAKIFEPTPEGARKV 674
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTL 305
VLATNIAETS+TID I YVVD G +KM +++ + + +L IS A+A QR GRAGRT
Sbjct: 675 VLATNIAETSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLVTPISKASATQRTGRAGRTS 734
Query: 306 KRSETQQYPN-DVLNMLKD---PELEGVN-NDVIFSL 337
+ Y + N L+D PE++ N V+ SL
Sbjct: 735 PGKCYRLYTAFNYYNDLEDNTVPEIQRTNLASVVLSL 771
Score = 94 (38.1 bits), Expect = 1.0e-21, Sum P(2) = 1.0e-21
Identities = 18/39 (46%), Positives = 27/39 (69%)
Query: 46 YQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+ + E RK LP Y RD +L+ V+++Q+ +I GETGSG
Sbjct: 394 FHMLQEDRKALPIYTYRDQLLNAVKDHQVLIIVGETGSG 432
Score = 48 (22.0 bits), Expect = 6.3e-17, Sum P(2) = 6.3e-17
Identities = 11/38 (28%), Positives = 21/38 (55%)
Query: 30 DAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLD 67
D+A K I L+ +QE ++ RK+ +++D + D
Sbjct: 211 DSAVDKGDIESLRKFSWQEYMKKRKQKKVLELKDDIED 248
>UNIPROTKB|E2RC56 [details] [associations]
symbol:DHX38 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 KO:K12815 OMA:PSRSTWE CTD:9785
EMBL:AAEX03004090 RefSeq:XP_536800.2 ProteinModelPortal:E2RC56
Ensembl:ENSCAFT00000032225 GeneID:479669 KEGG:cfa:479669
NextBio:20854813 Uniprot:E2RC56
Length = 1226
Score = 241 (89.9 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 60/160 (37%), Positives = 91/160 (56%)
Query: 189 ILVFLPGWDTINSLHRSMCQ--SSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIV 246
IL+F+PG + I + + N+ ++P++S LP+ Q IF P+GVRK +
Sbjct: 742 ILIFMPGQEDIEVTSDQIVEHLEELENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCI 801
Query: 247 LATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT-- 304
+ATNIAETS+T+D I++V+D G K+ F+ + + L+ IS ANA QR GRAGRT
Sbjct: 802 VATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGP 861
Query: 305 --LKRSETQQ-YPNDVLNMLKDPELEGVNNDVIFSLLQHI 341
R TQ Y N++L PE++ N + LL+ +
Sbjct: 862 GQCFRLYTQSAYKNELLTTTV-PEIQRTNLANVVLLLKSL 900
Score = 93 (37.8 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 26/91 (28%), Positives = 44/91 (48%)
Query: 1 MKSPHSP-KGLTHS-VTSWETRQKLLNDPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPS 58
+K P K LT + T QK + KK+ + + + +LE R+ LP
Sbjct: 480 VKKEEEPDKALTEDGKVDYRTEQKFADH------MKKKSEASSEFAKKKSILEQRQYLPI 533
Query: 59 YQMRDAVLDMVRNNQITVISGETGSGPPLHL 89
+ ++ +L ++R+N I ++ GETGSG L
Sbjct: 534 FAVQQELLTIIRDNSIVIVVGETGSGKTTQL 564
>UNIPROTKB|Q17R09 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9913 "Bos taurus" [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0005681 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428 KO:K12815
EMBL:BC118085 IPI:IPI00690755 RefSeq:NP_001069266.1
UniGene:Bt.42896 ProteinModelPortal:Q17R09 STRING:Q17R09
PRIDE:Q17R09 GeneID:520046 KEGG:bta:520046 CTD:9785
NextBio:20873012 Uniprot:Q17R09
Length = 1227
Score = 241 (89.9 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 60/160 (37%), Positives = 91/160 (56%)
Query: 189 ILVFLPGWDTINSLHRSMCQ--SSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIV 246
IL+F+PG + I + + N+ ++P++S LP+ Q IF P+GVRK +
Sbjct: 743 ILIFMPGQEDIEVTSDQIVEHLEELENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCI 802
Query: 247 LATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT-- 304
+ATNIAETS+T+D I++V+D G K+ F+ + + L+ IS ANA QR GRAGRT
Sbjct: 803 VATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGP 862
Query: 305 --LKRSETQQ-YPNDVLNMLKDPELEGVNNDVIFSLLQHI 341
R TQ Y N++L PE++ N + LL+ +
Sbjct: 863 GQCFRLYTQSAYKNELLTTTV-PEIQRTNLANVVLLLKSL 901
Score = 93 (37.8 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 26/91 (28%), Positives = 44/91 (48%)
Query: 1 MKSPHSP-KGLTHS-VTSWETRQKLLNDPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPS 58
+K P K LT + T QK + KK+ + + + +LE R+ LP
Sbjct: 481 VKKEEEPDKSLTEDGKVDYRTEQKFADH------MKKKSEASSEFAKKKSILEQRQYLPI 534
Query: 59 YQMRDAVLDMVRNNQITVISGETGSGPPLHL 89
+ ++ +L ++R+N I ++ GETGSG L
Sbjct: 535 FAVQQELLTIIRDNSIVIVVGETGSGKTTQL 565
>POMBASE|SPBC15C4.05 [details] [associations]
symbol:SPBC15C4.05 "ATP-dependent RNA/DNA helicase
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
PomBase:SPBC15C4.05 GO:GO:0005829 GO:GO:0005524 EMBL:CU329671
GO:GO:0003676 GO:GO:0004003 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 PIR:T39475 RefSeq:NP_595925.1
ProteinModelPortal:O60114 EnsemblFungi:SPBC15C4.05.1 GeneID:2539831
KEGG:spo:SPBC15C4.05 OrthoDB:EOG4TXG12 NextBio:20800979
Uniprot:O60114
Length = 1428
Score = 244 (91.0 bits), Expect = 1.9e-21, Sum P(3) = 1.9e-21
Identities = 53/117 (45%), Positives = 76/117 (64%)
Query: 189 ILVFLPGWDTINSLHRSMCQSS--FFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIV 246
+LVFLPG I + +S+ + F N +F I LHS L + Q+S+FN PP+G RKIV
Sbjct: 906 VLVFLPGISEILRV-KSLIEDMPMFRNHRKFCIYMLHSTLSSAQQQSVFNIPPKGCRKIV 964
Query: 247 LATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
L+TNIAET +TI D+ V+D G + ++ + +++ L ++S ANAKQR GRAGR
Sbjct: 965 LSTNIAETGVTIPDVTCVIDTGVHREMRYNSRRHLSRLTDTFVSKANAKQRSGRAGR 1021
Score = 95 (38.5 bits), Expect = 1.9e-21, Sum P(3) = 1.9e-21
Identities = 18/59 (30%), Positives = 34/59 (57%)
Query: 39 RKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHLDFITLKRS 97
++L+S ++ R +LP+ R+ ++D V N+Q+ +ISG+TG G + L+ S
Sbjct: 614 QQLESESAEKFKVFRNQLPATMFRETIIDAVNNSQLLIISGDTGCGKSTQIPAFLLENS 672
Score = 37 (18.1 bits), Expect = 1.9e-21, Sum P(3) = 1.9e-21
Identities = 7/12 (58%), Positives = 9/12 (75%)
Query: 358 DTINSLHRSMCQ 369
DT SL RS+C+
Sbjct: 1236 DTCKSLKRSICR 1247
>UNIPROTKB|Q92620 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9606 "Homo sapiens" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;IDA;TAS]
[GO:0005634 "nucleus" evidence=NAS] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=TAS] [GO:0006406 "mRNA export from nucleus"
evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0031124 "mRNA 3'-end
processing" evidence=TAS] Reactome:REACT_71 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AC004682
GO:GO:0005524 GO:GO:0005654 Reactome:REACT_1675 GO:GO:0003676
GO:GO:0006406 GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:CH471166 Reactome:REACT_1788
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0006369 GO:GO:0031124 Reactome:REACT_78
HOVERGEN:HBG039428 KO:K12815 OMA:PSRSTWE CTD:9785 EMBL:AF038391
EMBL:D86977 EMBL:BC004235 EMBL:BC008340 IPI:IPI00294211
RefSeq:NP_054722.2 UniGene:Hs.151218 ProteinModelPortal:Q92620
SMR:Q92620 IntAct:Q92620 STRING:Q92620 PhosphoSite:Q92620
DMDM:85700389 PaxDb:Q92620 PeptideAtlas:Q92620 PRIDE:Q92620
DNASU:9785 Ensembl:ENST00000268482 GeneID:9785 KEGG:hsa:9785
UCSC:uc002fcb.3 GeneCards:GC16P072127 HGNC:HGNC:17211 HPA:HPA041347
MIM:605584 neXtProt:NX_Q92620 PharmGKB:PA27225 InParanoid:Q92620
OrthoDB:EOG4Z62MS PhylomeDB:Q92620 ChiTaRS:DHX38 GenomeRNAi:9785
NextBio:36846 ArrayExpress:Q92620 Bgee:Q92620 CleanEx:HS_DHX38
Genevestigator:Q92620 GermOnline:ENSG00000140829 Uniprot:Q92620
Length = 1227
Score = 241 (89.9 bits), Expect = 3.1e-21, Sum P(2) = 3.1e-21
Identities = 60/160 (37%), Positives = 91/160 (56%)
Query: 189 ILVFLPGWDTINSLHRSMCQ--SSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIV 246
IL+F+PG + I + + N+ ++P++S LP+ Q IF P+GVRK +
Sbjct: 743 ILIFMPGQEDIEVTSDQIVEHLEELENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCI 802
Query: 247 LATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT-- 304
+ATNIAETS+T+D I++V+D G K+ F+ + + L+ IS ANA QR GRAGRT
Sbjct: 803 VATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGP 862
Query: 305 --LKRSETQQ-YPNDVLNMLKDPELEGVNNDVIFSLLQHI 341
R TQ Y N++L PE++ N + LL+ +
Sbjct: 863 GQCFRLYTQSAYKNELLTTTV-PEIQRTNLANVVLLLKSL 901
Score = 89 (36.4 bits), Expect = 3.1e-21, Sum P(2) = 3.1e-21
Identities = 25/91 (27%), Positives = 43/91 (47%)
Query: 1 MKSPHSP-KGLTHS-VTSWETRQKLLNDPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPS 58
+K P K +T + T QK + + E +K + +LE R+ LP
Sbjct: 481 VKKEEEPDKAVTEDGKVDYRTEQKFADHMKRKSEASSEFAKK------KSILEQRQYLPI 534
Query: 59 YQMRDAVLDMVRNNQITVISGETGSGPPLHL 89
+ ++ +L ++R+N I ++ GETGSG L
Sbjct: 535 FAVQQELLTIIRDNSIVIVVGETGSGKTTQL 565
>RGD|1310345 [details] [associations]
symbol:Dhx38 "DEAH (Asp-Glu-Ala-His) box polypeptide 38"
species:10116 "Rattus norvegicus" [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA;ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:1310345
GO:GO:0005524 GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00700000104421 OrthoDB:EOG4Z62MS
IPI:IPI00371467 PRIDE:D4A321 Ensembl:ENSRNOT00000019810
UCSC:RGD:1310345 Uniprot:D4A321
Length = 1228
Score = 241 (89.9 bits), Expect = 3.1e-21, Sum P(2) = 3.1e-21
Identities = 60/160 (37%), Positives = 91/160 (56%)
Query: 189 ILVFLPGWDTINSLHRSMCQ--SSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIV 246
IL+F+PG + I + + N+ ++P++S LP+ Q IF P+GVRK +
Sbjct: 744 ILIFMPGQEDIEVTSDQIVEHLEELENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCI 803
Query: 247 LATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT-- 304
+ATNIAETS+T+D I++V+D G K+ F+ + + L+ IS ANA QR GRAGRT
Sbjct: 804 VATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGP 863
Query: 305 --LKRSETQQ-YPNDVLNMLKDPELEGVNNDVIFSLLQHI 341
R TQ Y N++L PE++ N + LL+ +
Sbjct: 864 GQCFRLYTQSAYKNELLTTTV-PEIQRTNLANVVLLLKSL 902
Score = 89 (36.4 bits), Expect = 3.1e-21, Sum P(2) = 3.1e-21
Identities = 25/91 (27%), Positives = 43/91 (47%)
Query: 1 MKSPHSP-KGLTHS-VTSWETRQKLLNDPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPS 58
+K P K +T + T QK + + E +K + +LE R+ LP
Sbjct: 482 VKKEEEPDKAMTEDGKVDYRTEQKFADHMKEKSEASSEFAKK------KSILEQRQYLPI 535
Query: 59 YQMRDAVLDMVRNNQITVISGETGSGPPLHL 89
+ ++ +L ++R+N I ++ GETGSG L
Sbjct: 536 FAVQQELLTIIRDNSIVIVVGETGSGKTTQL 566
>ASPGD|ASPL0000008624 [details] [associations]
symbol:AN5839 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005829 "cytosol"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:BN001301 EMBL:AACD01000100
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
GO:GO:0008026 OrthoDB:EOG4TXG12 RefSeq:XP_663443.1
EnsemblFungi:CADANIAT00007203 GeneID:2870747 KEGG:ani:AN5839.2
HOGENOM:HOG000213693 OMA:KNIRRAI Uniprot:Q5B0U1
Length = 1436
Score = 252 (93.8 bits), Expect = 3.5e-21, Sum P(2) = 3.5e-21
Identities = 57/115 (49%), Positives = 71/115 (61%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
ILVFLPG I L+ + F + I LHS + + Q+ F PP+G+RKIV+A
Sbjct: 922 ILVFLPGMAEIRRLNDELLSEPTFQHG-WIIHALHSSIASDEQEKAFVVPPDGMRKIVIA 980
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAET ITI DI V+D GK K FD + ++ L +IS ANAKQRRGRAGR
Sbjct: 981 TNIAETGITIPDITAVIDAGKEKTMRFDERRQLSRLVEAFISRANAKQRRGRAGR 1035
Score = 78 (32.5 bits), Expect = 3.5e-21, Sum P(2) = 3.5e-21
Identities = 14/58 (24%), Positives = 34/58 (58%)
Query: 27 PVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
P ++ + + K + +Q M+++R +LP + ++ +L+ + +++ +I ETGSG
Sbjct: 616 PGINEQLSQIWMEKASTPAFQYMVQSRMQLPIWTFKNEILNTLNSHRALIICSETGSG 673
>CGD|CAL0004768 [details] [associations]
symbol:PRP22 species:5476 "Candida albicans" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IEA] [GO:0071021
"U2-type post-spliceosomal complex" evidence=IEA] [GO:0000350
"generation of catalytic spliceosome for second transesterification
step" evidence=IEA] [GO:0000390 "spliceosomal complex disassembly"
evidence=IEA] [GO:0000386 "second spliceosomal transesterification
activity" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0004768 GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AACQ01000012 InterPro:IPR022967 SMART:SM00316
KO:K12818 EMBL:AACQ01000011 RefSeq:XP_721941.1 RefSeq:XP_722102.1
ProteinModelPortal:Q5AJY8 STRING:Q5AJY8 GeneID:3636272
GeneID:3636404 KEGG:cal:CaO19.11516 KEGG:cal:CaO19.4033
Uniprot:Q5AJY8
Length = 996
Score = 230 (86.0 bits), Expect = 3.6e-21, Sum P(2) = 3.6e-21
Identities = 66/152 (43%), Positives = 88/152 (57%)
Query: 189 ILVFLPGWDTINS----LHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRK 244
ILVFL G + I + LH M + N I+P++S LP+ Q IF P G RK
Sbjct: 551 ILVFLTGQEEIETSCEALHERM-KLLGENIPELIILPVYSALPSEMQTRIFEPTPPGSRK 609
Query: 245 IVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT 304
++LATNIAETSITID I YVVD G K++ +D K + +L+ IS A A QR GRAGRT
Sbjct: 610 VILATNIAETSITIDGIYYVVDPGFVKINMYDSKLGMDSLRVTPISKAQANQRSGRAGRT 669
Query: 305 ----LKRSETQQ-YPNDVL-NMLKDPELEGVN 330
R T+Q Y +++ N + PE++ N
Sbjct: 670 GPGKCYRLYTEQAYEKEMIPNTI--PEIQRQN 699
Score = 98 (39.6 bits), Expect = 3.6e-21, Sum P(2) = 3.6e-21
Identities = 19/34 (55%), Positives = 24/34 (70%)
Query: 51 EARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
E R+ LP Y MR +L+ +R+NQ VI GETGSG
Sbjct: 331 EQRRMLPVYAMRSQLLEAIRDNQFVVIVGETGSG 364
Score = 42 (19.8 bits), Expect = 2.4e-15, Sum P(2) = 2.4e-15
Identities = 8/33 (24%), Positives = 18/33 (54%)
Query: 33 FKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAV 65
FK+E ++ + R +E +++ P +Q + V
Sbjct: 264 FKEEKFKQKKQREKEEKMQSELSDPLFQTSEPV 296
>CGD|CAL0005059 [details] [associations]
symbol:orf19.2818 species:5476 "Candida albicans" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IEA] [GO:0000386
"second spliceosomal transesterification activity" evidence=IEA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IEA]
[GO:0000350 "generation of catalytic spliceosome for second
transesterification step" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 CGD:CAL0005059
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACQ01000080 EMBL:AACQ01000079 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12815
RefSeq:XP_715749.1 RefSeq:XP_715799.1 STRING:Q5A227 GeneID:3642531
GeneID:3642595 KEGG:cal:CaO19.10336 KEGG:cal:CaO19.2818
Uniprot:Q5A227
Length = 1070
Score = 219 (82.2 bits), Expect = 5.6e-21, Sum P(2) = 5.6e-21
Identities = 70/201 (34%), Positives = 105/201 (52%)
Query: 152 PMKVFFCKNV----LQRLMKGVGANSPKRWVKLLRSMLVVPILVFLPGWDTINSLHRSMC 207
P++VFF ++V ++ +K V RW + ILVF+ G + I +
Sbjct: 544 PVEVFFNRDVNMDYVEMAVKQVLTIHLGRWNADNNNANDGDILVFMTGQEDIEITCDLIK 603
Query: 208 Q--SSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLATNIAETSITIDDIVYVV 265
+ + + I P++S +P QK IFN RK+V+ATNIAETS+T+D I YV+
Sbjct: 604 EKLNLLEDPPPLDIFPIYSTMPQDLQKKIFNKTNLQRRKVVVATNIAETSLTVDGIKYVI 663
Query: 266 DCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT----LKRSETQQYPN-DVLNM 320
DCG K+ ++ K + TL+ ISLANA QR GRAGRT R T++ D + +
Sbjct: 664 DCGLVKVKVYNPKLGMDTLQVVPISLANADQRSGRAGRTGAGIAYRLYTEKATEPDSMYV 723
Query: 321 LKDPELEGVNNDVIFSLLQHI 341
PE++ N I LL+ +
Sbjct: 724 QPIPEIQRSNLSNIMLLLKSL 744
Score = 109 (43.4 bits), Expect = 5.6e-21, Sum P(2) = 5.6e-21
Identities = 19/56 (33%), Positives = 37/56 (66%)
Query: 34 KKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHL 89
++E + ++Q++ + RK LP++ +R+ +L +R+NQ+T++ GETGSG L
Sbjct: 336 QEEKNADVNETKHQDIQQQRKSLPAFAVRNDLLTTIRDNQVTIVIGETGSGKTTQL 391
>FB|FBgn0026713 [details] [associations]
symbol:l(1)G0007 "lethal (1) G0007" species:7227 "Drosophila
melanogaster" [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0002121 "inter-male
aggressive behavior" evidence=IMP] [GO:0007476 "imaginal
disc-derived wing morphogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014298 GO:GO:0005681 GO:GO:0003676 GO:GO:0002121
GO:GO:0007476 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GO:GO:0000381 KO:K12815 GeneTree:ENSGT00700000104877 OMA:PSRSTWE
UniGene:Dm.4249 GeneID:32373 KEGG:dme:Dmel_CG32604
FlyBase:FBgn0026713 ChiTaRS:l(1)G0007 GenomeRNAi:32373
NextBio:778160 EMBL:AY058553 RefSeq:NP_572947.1 SMR:Q9VY54
MINT:MINT-334469 STRING:Q9VY54 EnsemblMetazoa:FBtr0073900
UCSC:CG32604-RA InParanoid:Q9VY54 Uniprot:Q9VY54
Length = 1222
Score = 242 (90.2 bits), Expect = 6.0e-21, Sum P(2) = 6.0e-21
Identities = 66/194 (34%), Positives = 107/194 (55%)
Query: 144 TYTFMGVS-PMKVFFCKNVLQRLMKGVGANSPKRWVKLLRSMLVVPILVFLPGWDTINSL 202
T+T G + P+ V F KN + ++ ++ K+ +++ + +L+F+PG + I
Sbjct: 703 TFTIPGRTFPVDVMFSKNTCEDYVE----SAVKQALQVHLTPNEGDMLIFMPGQEDIEVT 758
Query: 203 HRSMCQ--SSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLATNIAETSITIDD 260
+ + + N+ I+P++S LP+ Q IF +G+RK V+ATNIAETS+T+D
Sbjct: 759 CEVLEERLAEIDNAPALSILPIYSQLPSDLQAKIFQKSSDGLRKCVVATNIAETSLTVDG 818
Query: 261 IVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT----LKRSETQQYPND 316
I+YV+D G K+ ++ + + L+ IS ANA QR GRAGRT R TQ+ D
Sbjct: 819 IIYVIDSGYCKLKVYNPRIGMDALQIYPISQANANQRSGRAGRTGPGQAYRLYTQRQYKD 878
Query: 317 VLNMLKDPELEGVN 330
L L PE++ N
Sbjct: 879 ELLALTVPEIQRTN 892
Score = 85 (35.0 bits), Expect = 6.0e-21, Sum P(2) = 6.0e-21
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 45 RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHL 89
R + + E R+ LP + R +L+++R N + +I GETGSG L
Sbjct: 523 RKKTISEQRRFLPVFASRQELLNVIRENSVIIIVGETGSGKTTQL 567
>UNIPROTKB|E1BJ90 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00355 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:DSDQVFH GeneTree:ENSGT00700000104421
EMBL:DAAA02047415 IPI:IPI00713665 UniGene:Bt.42016
Ensembl:ENSBTAT00000008999 NextBio:20867826 Uniprot:E1BJ90
Length = 1146
Score = 255 (94.8 bits), Expect = 9.5e-21, Sum P(2) = 9.5e-21
Identities = 53/116 (45%), Positives = 77/116 (66%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFL G I+++ Q+ ++ R+ ++PLHS L Q +F+ P GVRK +L+
Sbjct: 381 LLVFLSGMAEISAVLEP-AQAYASHTQRWVVLPLHSALSVADQDKVFDVAPPGVRKCILS 439
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT 304
TNIAETS+TID I +VVD GK K ++D + + L+ WIS A+A+QR+GRAGRT
Sbjct: 440 TNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAGRT 495
Score = 68 (29.0 bits), Expect = 9.5e-21, Sum P(2) = 9.5e-21
Identities = 13/40 (32%), Positives = 23/40 (57%)
Query: 45 RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
R ++ R LP Q +L M++ +Q+ V++G+TG G
Sbjct: 151 RLAKLQRERAALPIAQYGHHILQMLKEHQVVVVAGDTGCG 190
Score = 37 (18.1 bits), Expect = 1.6e-17, Sum P(2) = 1.6e-17
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 101 QYPNDVLNMLKDPELEGVNND 121
QY + +L MLK+ ++ V D
Sbjct: 166 QYGHHILQMLKEHQVVVVAGD 186
>UNIPROTKB|Q14147 [details] [associations]
symbol:DHX34 "Probable ATP-dependent RNA helicase DHX34"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00355
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0008270
GO:GO:0003723 GO:GO:0005622 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:D50924 EMBL:AC008754 EMBL:AK297692
IPI:IPI00382739 RefSeq:NP_055496.2 UniGene:Hs.151706
ProteinModelPortal:Q14147 SMR:Q14147 IntAct:Q14147
PhosphoSite:Q14147 DMDM:311033371 PaxDb:Q14147 PRIDE:Q14147
DNASU:9704 Ensembl:ENST00000328771 GeneID:9704 KEGG:hsa:9704
UCSC:uc010xyn.2 CTD:9704 GeneCards:GC19P047853 HGNC:HGNC:16719
HPA:HPA042159 HPA:HPA043558 neXtProt:NX_Q14147 PharmGKB:PA27221
HOGENOM:HOG000232193 OMA:DSDQVFH OrthoDB:EOG4GB75B PhylomeDB:Q14147
ChiTaRS:DHX34 GenomeRNAi:9704 NextBio:36469 Bgee:Q14147
CleanEx:HS_DHX34 Genevestigator:Q14147 GermOnline:ENSG00000134815
Uniprot:Q14147
Length = 1143
Score = 257 (95.5 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
Identities = 53/116 (45%), Positives = 78/116 (67%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFL G I+++ + Q+ ++ R+ ++PLHS L Q +F+ P GVRK +L+
Sbjct: 381 LLVFLSGMAEISAVLEA-AQTYASHTQRWVVLPLHSALSVADQDKVFDVAPPGVRKCILS 439
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT 304
TNIAETS+TID I +VVD GK K ++D + + L+ WIS A+A+QR+GRAGRT
Sbjct: 440 TNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAGRT 495
Score = 65 (27.9 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
Identities = 12/40 (30%), Positives = 23/40 (57%)
Query: 45 RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
R ++ R LP Q + +L ++ +Q+ V++G+TG G
Sbjct: 151 RLAKLQRERAALPIAQYGNRILQTLKEHQVVVVAGDTGCG 190
>POMBASE|SPBC19C2.01 [details] [associations]
symbol:cdc28 "ATP-dependent RNA helicase Cdc28"
species:4896 "Schizosaccharomyces pombe" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=TAS] [GO:0005524 "ATP binding"
evidence=IC] [GO:0005681 "spliceosomal complex" evidence=IC]
[GO:0005682 "U5 snRNP" evidence=ISO] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IMP] [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPBC19C2.01
GO:GO:0005524 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0005682 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0046540 GO:GO:0004004 EMBL:U48733 PIR:T46568 PIR:T50372
RefSeq:NP_595686.2 ProteinModelPortal:Q10752 STRING:Q10752
EnsemblFungi:SPBC19C2.01.1 GeneID:2540707 KEGG:spo:SPBC19C2.01
HOGENOM:HOG000175261 KO:K12813 OMA:RIDDHRD OrthoDB:EOG4SBJ63
NextBio:20801829 GO:GO:0045292 Uniprot:Q10752
Length = 1055
Score = 231 (86.4 bits), Expect = 1.2e-20, Sum P(3) = 1.2e-20
Identities = 62/160 (38%), Positives = 91/160 (56%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRF-QII--PLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVFL G D I + +M + R +II P+++ LP+ Q IF+ P G RK+
Sbjct: 630 ILVFLTGQDEIELMSENMQELCRILGKRIPEIILCPIYANLPSELQAKIFDPTPPGARKV 689
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT- 304
VLATNIAETSITID + +V+D G K + ++ + + +L S A+A QR GRAGR
Sbjct: 690 VLATNIAETSITIDGVNFVIDSGFVKQNMYNPRTGMESLVSVPCSRASADQRAGRAGRVG 749
Query: 305 ---LKRSETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHI 341
R T++ N+ L+M+ PE++ N I LL+ +
Sbjct: 750 PGKCFRLYTRRTYNNELDMVTSPEIQRTNLTNIVLLLKSL 789
Score = 84 (34.6 bits), Expect = 1.2e-20, Sum P(3) = 1.2e-20
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 40 KLQSRRYQEMLEA-RKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHL 89
K+ + ++ LE+ RK LP YQ +D +L + Q+ +I ETGSG L
Sbjct: 401 KMTDVKVEKSLESSRKSLPVYQYKDDLLKAINEYQVLLIVAETGSGKTTQL 451
Score = 50 (22.7 bits), Expect = 1.2e-20, Sum P(3) = 1.2e-20
Identities = 17/45 (37%), Positives = 24/45 (53%)
Query: 100 QQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVYCT 144
++YP D+ PE + I ++LQ I TTQ G ILV+ T
Sbjct: 594 RRYPVDIY-YTPQPEANYIQA-AITTILQ-IHTTQPAGDILVFLT 635
Score = 47 (21.6 bits), Expect = 7.3e-17, Sum P(3) = 7.3e-17
Identities = 13/55 (23%), Positives = 24/55 (43%)
Query: 21 QKLLNDPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPS-YQMRDAVLDMVRNNQI 74
+KL + + KKE++R + R+ E ++P Y LD R ++
Sbjct: 269 EKLTQAEIRELEKKKELLRIAEERQRLEKQATEYQMPEDYFTEQGKLDRKRKEEV 323
>POMBASE|SPBC1711.17 [details] [associations]
symbol:prp16 "ATP-dependent RNA helicase Prp16
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000350
"generation of catalytic spliceosome for second transesterification
step" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005681 "spliceosomal
complex" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 PomBase:SPBC1711.17 GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0005681 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
KO:K12815 GO:GO:0000350 OMA:PSRSTWE PIR:T39724 RefSeq:NP_595890.2
ProteinModelPortal:Q9P774 IntAct:Q9P774 EnsemblFungi:SPBC1711.17.1
GeneID:2540006 KEGG:spo:SPBC1711.17 OrthoDB:EOG4GQTD2
NextBio:20801149 Uniprot:Q9P774
Length = 1173
Score = 229 (85.7 bits), Expect = 1.2e-20, Sum P(2) = 1.2e-20
Identities = 77/234 (32%), Positives = 118/234 (50%)
Query: 90 DFITLKRSETQQYPNDVLNMLKDPELE-GVNNDVIFSLLQHICTTQRPGAILVYCTYTFM 148
D + L+ S Q ++ D E +N D++ LL+ + + +R +LV T M
Sbjct: 590 DGVLLRESLMQNNLEKYSVIIMDEAHERSLNTDILMGLLKKVLSRRRDIKLLV--TSATM 647
Query: 149 GVSPMKVFFCKNVLQRLMKG-------VGANSP-KRWVKL-LRSMLVV----P---ILVF 192
FF Q + G + A +P +V+ +R +L + P ILVF
Sbjct: 648 NSQKFSDFF-GGAPQFTIPGRTYPVDIMFAKAPCSDYVEAAVRQVLQIHLSQPAGDILVF 706
Query: 193 LPGWDTINSLHRSMCQ--SSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLATN 250
+ G + I + + + ++ R I+P++S +P Q IF++ GVRK+V+ATN
Sbjct: 707 MTGQEDIEATCEIIADRLNQLHDAPRLSILPIYSQMPADLQAKIFDSAEPGVRKVVVATN 766
Query: 251 IAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT 304
IAETS+T+ I YVVD G K+ ++ K I TL+ IS ANA QR GRAGRT
Sbjct: 767 IAETSLTVHGISYVVDTGYCKLKMYNSKLGIDTLQVTPISQANANQRAGRAGRT 820
Score = 96 (38.9 bits), Expect = 1.2e-20, Sum P(2) = 1.2e-20
Identities = 21/64 (32%), Positives = 38/64 (59%)
Query: 27 PVLDAAFKKEMIRK-LQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGP 85
PV A ++ +K + R + E R+ LP++ +R+ +L ++R+NQ+ ++ GETGSG
Sbjct: 462 PVKVAGRSEQSNKKDTEFARTKSYREQREFLPAFAVREQLLSVIRDNQVLIVVGETGSGK 521
Query: 86 PLHL 89
L
Sbjct: 522 TTQL 525
>UNIPROTKB|G4MTU4 [details] [associations]
symbol:MGG_11351 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp16" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:CM001232 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K12815 RefSeq:XP_003713740.1 EnsemblFungi:MGG_11351T0
GeneID:5051310 KEGG:mgr:MGG_11351 Uniprot:G4MTU4
Length = 999
Score = 233 (87.1 bits), Expect = 1.8e-20, Sum P(2) = 1.8e-20
Identities = 62/155 (40%), Positives = 88/155 (56%)
Query: 183 SMLVVPILVFLPGWDTIN---SLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPP 239
SM ILVF+ G + I L R + + + I+P++S +P Q IF+ P
Sbjct: 508 SMGTGDILVFMTGQEDIEVTCELVRERLDA-LNDPPKLSILPIYSQMPADLQAKIFDRAP 566
Query: 240 EGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRG 299
GVRK ++ATNIAETS+T+D I+YVVD G +K+ ++ K + TL+ IS ANA QR G
Sbjct: 567 PGVRKCIVATNIAETSLTVDGIMYVVDAGYSKLKVYNPKMGMDTLQITPISQANASQRSG 626
Query: 300 RAGRT----LKRSETQQYPNDVLNMLKDPELEGVN 330
RAGRT R T++ D L + PE++ N
Sbjct: 627 RAGRTGPGKAFRLFTEKAFKDELYIQTIPEIQRTN 661
Score = 88 (36.0 bits), Expect = 1.8e-20, Sum P(2) = 1.8e-20
Identities = 15/39 (38%), Positives = 28/39 (71%)
Query: 51 EARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHL 89
E R+ LP++ +R+ ++ ++R+NQ+ ++ GETGSG L
Sbjct: 298 EQREFLPAFAVREDLMRVIRDNQVIIVVGETGSGKTTQL 336
Score = 39 (18.8 bits), Expect = 2.3e-15, Sum P(2) = 2.3e-15
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 18 ETRQKLLNDPVLDAAFKKEMIRK 40
E ++ LN VL FKK + R+
Sbjct: 424 EAHERALNTDVLMGLFKKILQRR 446
>UNIPROTKB|E2RTK4 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00355 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 EMBL:AAEX03000836
Ensembl:ENSCAFT00000006692 Uniprot:E2RTK4
Length = 1140
Score = 257 (95.5 bits), Expect = 2.6e-20, Sum P(3) = 2.6e-20
Identities = 54/116 (46%), Positives = 76/116 (65%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFL G I+S+ + Q+ + R+ ++PLHS L Q +F+ P GVRK +L+
Sbjct: 380 LLVFLSGMAEISSVLEA-AQTYASRTQRWVVLPLHSALSVADQDKVFDVAPPGVRKCILS 438
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT 304
TNIAETS+TID I +VVD GK K +D + + L+ WIS A+A+QR+GRAGRT
Sbjct: 439 TNIAETSVTIDGIRFVVDSGKVKEMGYDPQAKLHRLQEFWISQASAEQRKGRAGRT 494
Score = 65 (27.9 bits), Expect = 2.6e-20, Sum P(3) = 2.6e-20
Identities = 12/40 (30%), Positives = 23/40 (57%)
Query: 45 RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
R ++ R LP Q + +L ++ +Q+ V++G+TG G
Sbjct: 150 RLAKLQHERAALPIAQYGNRILQTLKEHQVVVVAGDTGCG 189
Score = 37 (18.1 bits), Expect = 2.6e-20, Sum P(3) = 2.6e-20
Identities = 13/61 (21%), Positives = 24/61 (39%)
Query: 365 RSMCQSSFFNSCLLYEFAMVDNKPKEIITVRDCLSFECKPSTAKIIKELRARLDMLLAHK 424
R C+ LYE A + + KE++ L+ P+ L+ R + ++
Sbjct: 663 RKWCRHRGIEEHRLYEMANLRRQFKELLEDHGLLARAQAPTPGDSYHRLQQRRERRALYR 722
Query: 425 L 425
L
Sbjct: 723 L 723
>UNIPROTKB|E2RTK2 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00355 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 OMA:DSDQVFH
GeneTree:ENSGT00700000104421 EMBL:AAEX03000836
Ensembl:ENSCAFT00000006694 Uniprot:E2RTK2
Length = 1177
Score = 257 (95.5 bits), Expect = 2.9e-20, Sum P(3) = 2.9e-20
Identities = 54/116 (46%), Positives = 76/116 (65%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFL G I+S+ + Q+ + R+ ++PLHS L Q +F+ P GVRK +L+
Sbjct: 385 LLVFLSGMAEISSVLEA-AQTYASRTQRWVVLPLHSALSVADQDKVFDVAPPGVRKCILS 443
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT 304
TNIAETS+TID I +VVD GK K +D + + L+ WIS A+A+QR+GRAGRT
Sbjct: 444 TNIAETSVTIDGIRFVVDSGKVKEMGYDPQAKLHRLQEFWISQASAEQRKGRAGRT 499
Score = 65 (27.9 bits), Expect = 2.9e-20, Sum P(3) = 2.9e-20
Identities = 12/40 (30%), Positives = 23/40 (57%)
Query: 45 RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
R ++ R LP Q + +L ++ +Q+ V++G+TG G
Sbjct: 155 RLAKLQHERAALPIAQYGNRILQTLKEHQVVVVAGDTGCG 194
Score = 37 (18.1 bits), Expect = 2.9e-20, Sum P(3) = 2.9e-20
Identities = 13/61 (21%), Positives = 24/61 (39%)
Query: 365 RSMCQSSFFNSCLLYEFAMVDNKPKEIITVRDCLSFECKPSTAKIIKELRARLDMLLAHK 424
R C+ LYE A + + KE++ L+ P+ L+ R + ++
Sbjct: 668 RKWCRHRGIEEHRLYEMANLRRQFKELLEDHGLLARAQAPTPGDSYHRLQQRRERRALYR 727
Query: 425 L 425
L
Sbjct: 728 L 728
>TAIR|locus:2088847 [details] [associations]
symbol:AT3G26560 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA;ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0000226 "microtubule cytoskeleton
organization" evidence=RCA] [GO:0000911 "cytokinesis by cell plate
formation" evidence=RCA] [GO:0006486 "protein glycosylation"
evidence=RCA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005829 GO:GO:0005739 GO:GO:0009506 GO:GO:0005524
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0008380
GO:GO:0006397 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 EMBL:X98130
EMBL:X97970 EMBL:AB028611 IPI:IPI00530246 RefSeq:NP_189288.1
UniGene:At.46918 ProteinModelPortal:Q38953 SMR:Q38953 STRING:Q38953
PaxDb:Q38953 PRIDE:Q38953 EnsemblPlants:AT3G26560.1 GeneID:822264
KEGG:ath:AT3G26560 GeneFarm:1800 TAIR:At3g26560 InParanoid:Q38953
KO:K12818 OMA:NAWCYEN PhylomeDB:Q38953 ProtClustDB:CLSN2684863
Genevestigator:Q38953 GermOnline:AT3G26560 Uniprot:Q38953
Length = 1168
Score = 234 (87.4 bits), Expect = 3.5e-20, Sum P(2) = 3.5e-20
Identities = 63/150 (42%), Positives = 88/150 (58%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF---NSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVFL G + I+S +S+ + N I+P++S LP+ Q IF+ PP G RK+
Sbjct: 726 ILVFLTGQEEIDSACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPPPPGKRKV 785
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT- 304
V+ATNIAE S+TID I YVVD G K + ++ K + +L IS A+AKQR GRAGRT
Sbjct: 786 VVATNIAEASLTIDGIYYVVDPGFAKQNVYNPKQGLESLVITPISQASAKQRAGRAGRTG 845
Query: 305 ---LKRSETQQ-YPNDVLNMLKDPELEGVN 330
R T+ Y N+ + PE++ +N
Sbjct: 846 PGKCYRLYTESAYRNE-MPPTSIPEIQRIN 874
Score = 86 (35.3 bits), Expect = 3.5e-20, Sum P(2) = 3.5e-20
Identities = 15/34 (44%), Positives = 24/34 (70%)
Query: 51 EARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
E R+ LP Y+++ ++ V +NQ+ V+ GETGSG
Sbjct: 510 EQRESLPIYKLKKELIQAVHDNQVLVVIGETGSG 543
>POMBASE|SPAC10F6.02c [details] [associations]
symbol:prp22 "ATP-dependent RNA helicase Prp22"
species:4896 "Schizosaccharomyces pombe" [GO:0000390 "spliceosomal
complex disassembly" evidence=ISS] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005681 "spliceosomal complex"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
PomBase:SPAC10F6.02c GO:GO:0005524 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0005681 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GO:GO:0000390 KO:K12818
OMA:NAWCYEN PIR:T37496 RefSeq:NP_593253.1 ProteinModelPortal:O42643
IntAct:O42643 STRING:O42643 PRIDE:O42643
EnsemblFungi:SPAC10F6.02c.1 GeneID:2542978 KEGG:spo:SPAC10F6.02c
OrthoDB:EOG45TGW9 NextBio:20804011 Uniprot:O42643
Length = 1168
Score = 225 (84.3 bits), Expect = 4.5e-20, Sum P(3) = 4.5e-20
Identities = 65/150 (43%), Positives = 85/150 (56%)
Query: 189 ILVFLPGWDTINSLHRSMCQ-SSFFNSS--RFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVFL G + I++ + + S S I+P++S LP+ Q IF P G RK+
Sbjct: 722 ILVFLTGQEEIDTSCEILYERSKMLGDSIPELVILPVYSALPSEIQSRIFEPAPPGGRKV 781
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT- 304
V+ATNIAETS+TID I YVVD G K S FD K + +L IS A A+QR GRAGRT
Sbjct: 782 VIATNIAETSLTIDGIYYVVDPGFVKQSCFDPKLGMDSLIVTPISQAQARQRSGRAGRTG 841
Query: 305 ---LKRSETQQ-YPNDVLNMLKDPELEGVN 330
R T+ Y N++L PE++ N
Sbjct: 842 PGKCYRLYTESAYRNEMLPS-PIPEIQRQN 870
Score = 89 (36.4 bits), Expect = 4.5e-20, Sum P(3) = 4.5e-20
Identities = 28/84 (33%), Positives = 36/84 (42%)
Query: 1 MKSPHSPKGLTHSVTSWETRQKLLNDPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQ 60
M +P K V RQ P A + I R M E R+ LP ++
Sbjct: 457 MSNPQDRK-FAQDVRDSAARQLTSETPSWRQATRNANI-SYGKRTTLSMKEQREGLPVFK 514
Query: 61 MRDAVLDMVRNNQITVISGETGSG 84
+R L+ V NQI V+ GETGSG
Sbjct: 515 LRKQFLEAVSKNQILVLLGETGSG 538
Score = 48 (22.0 bits), Expect = 4.5e-20, Sum P(3) = 4.5e-20
Identities = 13/45 (28%), Positives = 23/45 (51%)
Query: 100 QQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVYCT 144
+ YP +++ K PE + + D + I ++ PG ILV+ T
Sbjct: 686 RSYPVEIM-YTKQPEADYL--DAALMTVMQIHLSEGPGDILVFLT 727
>MGI|MGI:1918973 [details] [associations]
symbol:Dhx34 "DEAH (Asp-Glu-Ala-His) box polypeptide 34"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005622
"intracellular" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00355 SMART:SM00490 SMART:SM00847
MGI:MGI:1918973 GO:GO:0005524 GO:GO:0008270 GO:GO:0003723
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
CTD:9704 HOGENOM:HOG000232193 ChiTaRS:DHX34 EMBL:AK129062
EMBL:AK004733 IPI:IPI00113303 RefSeq:NP_082159.3 UniGene:Mm.75259
ProteinModelPortal:Q9DBV3 SMR:Q9DBV3 PhosphoSite:Q9DBV3
PaxDb:Q9DBV3 PRIDE:Q9DBV3 Ensembl:ENSMUST00000094816
Ensembl:ENSMUST00000163968 GeneID:71723 KEGG:mmu:71723
GeneTree:ENSGT00700000104421 HOVERGEN:HBG051355 NextBio:334335
Bgee:Q9DBV3 CleanEx:MM_DHX34 Genevestigator:Q9DBV3
GermOnline:ENSMUSG00000006019 Uniprot:Q9DBV3
Length = 1145
Score = 250 (93.1 bits), Expect = 4.6e-20, Sum P(2) = 4.6e-20
Identities = 54/117 (46%), Positives = 76/117 (64%)
Query: 189 ILVFLPGWDTINS-LHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
+LVFL G I + L + +S + R+ ++PLHS L Q +F+ P GVRK +L
Sbjct: 383 LLVFLSGMAEITTVLDAAQAYASL--TQRWVVLPLHSALSVSDQDKVFDVAPAGVRKCIL 440
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT 304
+TNIAETS+TID I +VVD GK K ++D + + L+ WIS A+A+QR+GRAGRT
Sbjct: 441 STNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAGRT 497
Score = 67 (28.6 bits), Expect = 4.6e-20, Sum P(2) = 4.6e-20
Identities = 25/81 (30%), Positives = 41/81 (50%)
Query: 5 HSP-KGLTHSVTSWETRQKLLNDPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRD 63
H P +GL S E R+ LL+ LD F++ K R ++ R LP Q +
Sbjct: 121 HGPGRGLPPERVS-EFRRALLH--YLD--FQQ----KQAFGRLAKLQRERAALPIAQYGN 171
Query: 64 AVLDMVRNNQITVISGETGSG 84
+L ++ +Q+ V++G+TG G
Sbjct: 172 RILQTLKEHQVVVVAGDTGCG 192
>ASPGD|ASPL0000014477 [details] [associations]
symbol:AN4032 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 EMBL:BN001302
EMBL:AACD01000065 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12815 OMA:PSRSTWE OrthoDB:EOG4GQTD2
RefSeq:XP_661636.1 EnsemblFungi:CADANIAT00004650 GeneID:2873454
KEGG:ani:AN4032.2 Uniprot:Q5B5Z8
Length = 924
Score = 225 (84.3 bits), Expect = 3.0e-15, P = 3.0e-15
Identities = 92/298 (30%), Positives = 144/298 (48%)
Query: 30 DAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHL 89
D K MI Q RR M A++ S +M + D+V I E +GP +
Sbjct: 228 DGYAKFGMIGCTQPRRVAAMSVAKRV--SEEMEVDLGDLVGY----AIRFEDCTGPNTAI 281
Query: 90 DFIT---LKRSETQQYPNDVLN-MLKDPELE-GVNNDVIFSLLQHICTTQRPGAILVYCT 144
++T L R Q D + ++ D E +N DV+ LL+ I +R ++V T
Sbjct: 282 KYMTDGVLLRESLVQTDLDKYSCIIMDEAHERALNTDVLMGLLKKILARRRDLKLIV--T 339
Query: 145 YTFMGVSPMKVFFCKNVLQRLMKG----VGAN---SP-KRWV-KLLRSMLVV-----P-- 188
M FF + ++ G V + +P + +V ++ +L + P
Sbjct: 340 SATMNAERFSRFF-GGAPEFIIPGRTFPVDVHFSRTPCEDYVDSAVKQVLAIHVSQGPGD 398
Query: 189 ILVFLPGWDTINSLHRSMCQS-SFFNSS-RFQIIPLHSMLPTVSQKSIFNTPPEGVRKIV 246
ILVF+ G + I + + + N + I+P++S +P Q IF GVRK++
Sbjct: 399 ILVFMTGQEDIEATCELVDERLKLLNDPPKLSILPIYSQMPAEQQAKIFERAAPGVRKVI 458
Query: 247 LATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT 304
+ATNIAETS+T+D I++VVD G +K+ ++ K + TL+ IS ANA QR GRAGRT
Sbjct: 459 VATNIAETSLTVDGIMFVVDSGYSKLKVYNPKMGMDTLQITPISQANANQRSGRAGRT 516
Score = 224 (83.9 bits), Expect = 5.9e-20, Sum P(2) = 5.9e-20
Identities = 57/154 (37%), Positives = 89/154 (57%)
Query: 189 ILVFLPGWDTINSLHRSMCQS-SFFNSS-RFQIIPLHSMLPTVSQKSIFNTPPEGVRKIV 246
ILVF+ G + I + + + N + I+P++S +P Q IF GVRK++
Sbjct: 399 ILVFMTGQEDIEATCELVDERLKLLNDPPKLSILPIYSQMPAEQQAKIFERAAPGVRKVI 458
Query: 247 LATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT-- 304
+ATNIAETS+T+D I++VVD G +K+ ++ K + TL+ IS ANA QR GRAGRT
Sbjct: 459 VATNIAETSLTVDGIMFVVDSGYSKLKVYNPKMGMDTLQITPISQANANQRSGRAGRTGP 518
Query: 305 --LKRSETQ-QYPNDV-LNMLKDPELEGVNNDVI 334
R T+ Y N++ L + + + ++N V+
Sbjct: 519 GKAYRLYTEVAYKNEMYLQTIPEIQRTSLSNTVL 552
Score = 92 (37.4 bits), Expect = 5.9e-20, Sum P(2) = 5.9e-20
Identities = 17/39 (43%), Positives = 28/39 (71%)
Query: 51 EARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHL 89
E R+ LP++ +R+ +L ++R+NQ+ V+ GETGSG L
Sbjct: 183 EQREFLPAFAVREDLLRVIRDNQVVVVVGETGSGKTTQL 221
>FB|FBgn0086444 [details] [associations]
symbol:l(2)37Cb "lethal (2) 37Cb" species:7227 "Drosophila
melanogaster" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;ISS] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014134 GO:GO:0022008 GO:GO:0003676 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 KO:K12813 GO:GO:0016779 GeneTree:ENSGT00700000104241
OMA:GTLHREF EMBL:AY061330 RefSeq:NP_609946.1 UniGene:Dm.468
SMR:Q9VIZ3 IntAct:Q9VIZ3 MINT:MINT-318410 STRING:Q9VIZ3
EnsemblMetazoa:FBtr0081163 GeneID:35192 KEGG:dme:Dmel_CG10689
UCSC:CG10689-RA FlyBase:FBgn0086444 InParanoid:Q9VIZ3
OrthoDB:EOG459ZWG GenomeRNAi:35192 NextBio:792305 Uniprot:Q9VIZ3
Length = 894
Score = 226 (84.6 bits), Expect = 6.5e-20, Sum P(2) = 6.5e-20
Identities = 52/119 (43%), Positives = 73/119 (61%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQ---IIPLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVFL G D I + + S+ + +IP+++ LP+ Q IF P RK+
Sbjct: 464 ILVFLTGQDEIETCQEVLHDRVKRLGSKIRELIVIPVYANLPSDMQAKIFEPTPPNARKV 523
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT 304
+LATNIAETS+TID+I+YV+D G K +NF+ + + +L IS A+A QR GRAGRT
Sbjct: 524 ILATNIAETSLTIDNIIYVIDPGFAKQNNFNSRTGMESLMVVPISKASANQRAGRAGRT 582
Score = 89 (36.4 bits), Expect = 6.5e-20, Sum P(2) = 6.5e-20
Identities = 35/115 (30%), Positives = 54/115 (46%)
Query: 42 QSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGP----PLHL---DFITL 94
+ R+ + E R+ LP Y ++ ++ V+ +Q+ +I GETGSG P +L F
Sbjct: 238 KERKRLTLDETRRSLPVYPFKEDLIAAVKEHQVLIIEGETGSGKTTQVPQYLVEAGFTKD 297
Query: 95 KRSETQQYPNDVLNM---LKDPELEGVN--NDVIFSLLQHICTTQRPGAILVYCT 144
K+ P V M + E GV N+V +S+ CT+ R IL Y T
Sbjct: 298 KKMIGCTQPRRVAAMSVAARVAEEMGVKLGNEVGYSIRFEDCTSDR--TILKYMT 350
Score = 48 (22.0 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 19/90 (21%), Positives = 40/90 (44%)
Query: 28 VLDAAFKKEMIRKLQSRRYQEMLEARKKLPSY--QMRDAVLDMVRNNQITVISGETGSGP 85
V+D+ + I + R E + K +P Q R L+ +++++ + +
Sbjct: 51 VVDSTGGRRAIEEATKRLKLEHEDRDKIVPHLRLQSRRQYLEKRKDDKVAELEADILDDE 110
Query: 86 PLHLDFITLKRS-ETQQYPNDVLNMLKDPE 114
L + + KR E ++Y +LN+ K+ E
Sbjct: 111 YLFDESVLTKREKEEREYKKQLLNIAKEHE 140
>ZFIN|ZDB-GENE-050809-39 [details] [associations]
symbol:dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide
8" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0051301 "cell division" evidence=IMP] [GO:0060215
"primitive hemopoiesis" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0070054 "mRNA splicing, via endonucleolytic
cleavage and ligation" evidence=IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-050809-39 GO:GO:0005524 GO:GO:0005634 GO:GO:0051301
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN CTD:1659
GO:GO:0060215 InterPro:IPR013957 Pfam:PF08648 EMBL:AL833789
IPI:IPI00498887 RefSeq:XP_002663993.1 UniGene:Dr.159472
ProteinModelPortal:E7F7E3 Ensembl:ENSDART00000066282 GeneID:606595
KEGG:dre:606595 NextBio:20892459 Bgee:E7F7E3 GO:GO:0070054
Uniprot:E7F7E3
Length = 1210
Score = 222 (83.2 bits), Expect = 1.3e-19, Sum P(2) = 1.3e-19
Identities = 63/150 (42%), Positives = 84/150 (56%)
Query: 189 ILVFLPGWDTINS----LHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRK 244
ILVFL G + I++ L+ M +S + I+P++S LP+ Q IF+ P G RK
Sbjct: 766 ILVFLTGQEEIDTACEILYERM-KSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRK 824
Query: 245 IVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT 304
+V+ATNIAETS+TID I YVVD G K ++ K I L IS A AKQR GRAGRT
Sbjct: 825 VVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRT 884
Query: 305 ----LKRSETQQYPNDVLNMLKDPELEGVN 330
R T++ D + PE++ N
Sbjct: 885 GPGKCYRLYTERAYRDEMLTTNVPEIQRTN 914
Score = 94 (38.1 bits), Expect = 1.3e-19, Sum P(2) = 1.3e-19
Identities = 16/36 (44%), Positives = 27/36 (75%)
Query: 49 MLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+LE R+ LP Y++++ ++ V +NQI ++ GETGSG
Sbjct: 548 ILEQRESLPIYKLKEQLIQAVHDNQILIVIGETGSG 583
>DICTYBASE|DDB_G0267516 [details] [associations]
symbol:dhx57 "RWD domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908
PROSITE:PS51194 SMART:SM00490 SMART:SM00591 SMART:SM00847
dictyBase:DDB_G0267516 GO:GO:0005524 GenomeReviews:CM000150_GR
EMBL:AAFI02000003 GO:GO:0003676 InterPro:IPR015940 PROSITE:PS50030
Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K13026
RefSeq:XP_647095.1 ProteinModelPortal:Q55GT9
EnsemblProtists:DDB0235268 GeneID:8615899 KEGG:ddi:DDB_G0267516
OMA:EVHERST Uniprot:Q55GT9
Length = 1451
Score = 236 (88.1 bits), Expect = 1.5e-19, Sum P(4) = 1.5e-19
Identities = 57/158 (36%), Positives = 86/158 (54%)
Query: 189 ILVFLPGWDTINSLHRSMCQ--SSFFNS--SRFQIIPLHSMLPTVSQKSIFNTPPEGVRK 244
ILVF+PG I L + + S+F + R +PLHS L Q+ +F P G K
Sbjct: 900 ILVFVPGLSDILELCSRLGKPISTFTEAICQRIWCVPLHSSLSPKDQQKVFEKAPNGRVK 959
Query: 245 IVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT 304
+V+ATNIAETSITI+D+ VVDCG+ F+ + + EW S A+ +QR GRAGRT
Sbjct: 960 VVIATNIAETSITIEDVEIVVDCGRVNQMTFNSITGNSVMSEEWTSKASCRQRAGRAGRT 1019
Query: 305 LKRSETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHIC 342
+ + + + L+D + +++ + LQ +C
Sbjct: 1020 SSGLCFKVFTKSMESQLQDQDTP----EILRTSLQQLC 1053
Score = 69 (29.3 bits), Expect = 1.5e-19, Sum P(4) = 1.5e-19
Identities = 18/67 (26%), Positives = 37/67 (55%)
Query: 21 QKLLNDPV---LDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVI 77
+K+LN+ ++ K E R ++ + +++ R+ LP ++ + L ++ NQ+ VI
Sbjct: 589 KKVLNEKEKLKINKELKNEYDRLIKVDK--GVIKKRESLPVFKRKKEFLKCLQENQVVVI 646
Query: 78 SGETGSG 84
+ ETG G
Sbjct: 647 TAETGCG 653
Score = 49 (22.3 bits), Expect = 1.5e-19, Sum P(4) = 1.5e-19
Identities = 14/48 (29%), Positives = 28/48 (58%)
Query: 98 ETQQYPNDVLNMLK-DPELEGVNNDVIFSLLQHICT--TQRPGAILVY 142
+ ++ N+ LN LK + + +N DV+ SL+ H+ ++ +ILV+
Sbjct: 856 DEEEILNNKLNQLKISIDQKRINLDVVESLILHLVNGVLKKDKSILVF 903
Score = 44 (20.5 bits), Expect = 1.5e-19, Sum P(4) = 1.5e-19
Identities = 15/46 (32%), Positives = 24/46 (52%)
Query: 386 NKPKEIITVRDCLSFECKPSTAKII---KELRARLDMLLAHKLSHP 428
+K + I++ L F K ++ KII KE+R + LL K+ P
Sbjct: 1385 DKSYQTISLDKWLKF--KATSGKIIVLLKEIRILFNHLLKQKIDQP 1428
>UNIPROTKB|F5H658 [details] [associations]
symbol:DHX8 "ATP-dependent RNA helicase DHX8" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0005634
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
HGNC:HGNC:2749 EMBL:AC068675 EMBL:AC087650 IPI:IPI01010550
ProteinModelPortal:F5H658 SMR:F5H658 Ensembl:ENST00000540306
UCSC:uc010wig.2 ArrayExpress:F5H658 Bgee:F5H658 Uniprot:F5H658
Length = 1181
Score = 222 (83.2 bits), Expect = 1.5e-19, Sum P(2) = 1.5e-19
Identities = 63/150 (42%), Positives = 84/150 (56%)
Query: 189 ILVFLPGWDTINS----LHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRK 244
ILVFL G + I++ L+ M +S + I+P++S LP+ Q IF+ P G RK
Sbjct: 776 ILVFLTGQEEIDTACEILYERM-KSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRK 834
Query: 245 IVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT 304
+V+ATNIAETS+TID I YVVD G K ++ K I L IS A AKQR GRAGRT
Sbjct: 835 VVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRT 894
Query: 305 ----LKRSETQQYPNDVLNMLKDPELEGVN 330
R T++ D + PE++ N
Sbjct: 895 GPGKCYRLYTERAYRDEMLTTNVPEIQRTN 924
Score = 93 (37.8 bits), Expect = 1.5e-19, Sum P(2) = 1.5e-19
Identities = 16/36 (44%), Positives = 27/36 (75%)
Query: 49 MLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+LE R+ LP Y++++ ++ V +NQI ++ GETGSG
Sbjct: 558 ILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSG 593
Score = 41 (19.5 bits), Expect = 4.0e-14, Sum P(2) = 4.0e-14
Identities = 13/48 (27%), Positives = 18/48 (37%)
Query: 70 RNNQITVISGETGS-GP--PLHLDFITLKRSETQQYPNDVLNMLKDPE 114
R N + + ET P P HL ++ E L + DPE
Sbjct: 351 RRNLVGETNEETSMRNPDRPTHLSLVSAPEVEDDSLERKRLTRISDPE 398
>RGD|1310723 [details] [associations]
symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide 8"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:1310723
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316
HOVERGEN:HBG039428 GeneTree:ENSGT00700000104241 KO:K12818 CTD:1659
OrthoDB:EOG4D26P2 UniGene:Rn.108087 EMBL:AY383690 IPI:IPI00370026
RefSeq:NP_001041309.1 SMR:Q6TXG4 Ensembl:ENSRNOT00000048140
GeneID:287727 KEGG:rno:287727 UCSC:RGD:1310723 NextBio:626887
Genevestigator:Q6TXG4 Uniprot:Q6TXG4
Length = 1210
Score = 222 (83.2 bits), Expect = 1.7e-19, Sum P(2) = 1.7e-19
Identities = 63/150 (42%), Positives = 84/150 (56%)
Query: 189 ILVFLPGWDTINS----LHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRK 244
ILVFL G + I++ L+ M +S + I+P++S LP+ Q IF+ P G RK
Sbjct: 745 ILVFLTGQEEIDTACEILYERM-KSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRK 803
Query: 245 IVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT 304
+V+ATNIAETS+TID I YVVD G K ++ K I L IS A AKQR GRAGRT
Sbjct: 804 VVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRT 863
Query: 305 ----LKRSETQQYPNDVLNMLKDPELEGVN 330
R T++ D + PE++ N
Sbjct: 864 GPGKCYRLYTERAYRDEMLTTNVPEIQRTN 893
Score = 93 (37.8 bits), Expect = 1.7e-19, Sum P(2) = 1.7e-19
Identities = 16/36 (44%), Positives = 27/36 (75%)
Query: 49 MLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+LE R+ LP Y++++ ++ V +NQI ++ GETGSG
Sbjct: 527 ILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSG 562
Score = 41 (19.5 bits), Expect = 4.2e-14, Sum P(2) = 4.2e-14
Identities = 13/48 (27%), Positives = 18/48 (37%)
Query: 70 RNNQITVISGETGS-GP--PLHLDFITLKRSETQQYPNDVLNMLKDPE 114
R N + + ET P P HL ++ E L + DPE
Sbjct: 320 RRNLVGETNEETSMRNPDRPTHLSLVSAPEVEDDSLERKRLTRISDPE 367
>UNIPROTKB|Q14562 [details] [associations]
symbol:DHX8 "ATP-dependent RNA helicase DHX8" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=TAS] [GO:0005681 "spliceosomal complex" evidence=TAS]
[GO:0008380 "RNA splicing" evidence=TAS] [GO:0006396 "RNA
processing" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 EMBL:D50487 GO:GO:0005524 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316
HOVERGEN:HBG039428 KO:K12818 OMA:NAWCYEN IPI:IPI00031508 PIR:A56236
RefSeq:NP_004932.1 UniGene:Hs.463105 PDB:2EQS PDB:3I4U PDBsum:2EQS
PDBsum:3I4U ProteinModelPortal:Q14562 SMR:Q14562 IntAct:Q14562
STRING:Q14562 PhosphoSite:Q14562 DMDM:3023637 PaxDb:Q14562
PeptideAtlas:Q14562 PRIDE:Q14562 Ensembl:ENST00000262415
GeneID:1659 KEGG:hsa:1659 UCSC:uc002idu.1 CTD:1659
GeneCards:GC17P041572 HGNC:HGNC:2749 HPA:HPA049285 MIM:600396
neXtProt:NX_Q14562 PharmGKB:PA27231 InParanoid:Q14562
OrthoDB:EOG4D26P2 PhylomeDB:Q14562 EvolutionaryTrace:Q14562
GenomeRNAi:1659 NextBio:6828 ArrayExpress:Q14562 Bgee:Q14562
CleanEx:HS_DHX8 Genevestigator:Q14562 GermOnline:ENSG00000067596
Uniprot:Q14562
Length = 1220
Score = 222 (83.2 bits), Expect = 1.7e-19, Sum P(2) = 1.7e-19
Identities = 63/150 (42%), Positives = 84/150 (56%)
Query: 189 ILVFLPGWDTINS----LHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRK 244
ILVFL G + I++ L+ M +S + I+P++S LP+ Q IF+ P G RK
Sbjct: 776 ILVFLTGQEEIDTACEILYERM-KSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRK 834
Query: 245 IVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT 304
+V+ATNIAETS+TID I YVVD G K ++ K I L IS A AKQR GRAGRT
Sbjct: 835 VVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRT 894
Query: 305 ----LKRSETQQYPNDVLNMLKDPELEGVN 330
R T++ D + PE++ N
Sbjct: 895 GPGKCYRLYTERAYRDEMLTTNVPEIQRTN 924
Score = 93 (37.8 bits), Expect = 1.7e-19, Sum P(2) = 1.7e-19
Identities = 16/36 (44%), Positives = 27/36 (75%)
Query: 49 MLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+LE R+ LP Y++++ ++ V +NQI ++ GETGSG
Sbjct: 558 ILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSG 593
Score = 41 (19.5 bits), Expect = 4.3e-14, Sum P(2) = 4.3e-14
Identities = 13/48 (27%), Positives = 18/48 (37%)
Query: 70 RNNQITVISGETGS-GP--PLHLDFITLKRSETQQYPNDVLNMLKDPE 114
R N + + ET P P HL ++ E L + DPE
Sbjct: 351 RRNLVGETNEETSMRNPDRPTHLSLVSAPEVEDDSLERKRLTRISDPE 398
>UNIPROTKB|D4A805 [details] [associations]
symbol:Dhx8 "Protein Dhx8" species:10116 "Rattus
norvegicus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1310723 GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 EMBL:CH473948 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
OMA:NAWCYEN IPI:IPI00567810 UniGene:Rn.108087
Ensembl:ENSRNOT00000028198 Uniprot:D4A805
Length = 1242
Score = 222 (83.2 bits), Expect = 1.8e-19, Sum P(2) = 1.8e-19
Identities = 63/150 (42%), Positives = 84/150 (56%)
Query: 189 ILVFLPGWDTINS----LHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRK 244
ILVFL G + I++ L+ M +S + I+P++S LP+ Q IF+ P G RK
Sbjct: 798 ILVFLTGQEEIDTACEILYERM-KSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRK 856
Query: 245 IVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT 304
+V+ATNIAETS+TID I YVVD G K ++ K I L IS A AKQR GRAGRT
Sbjct: 857 VVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRT 916
Query: 305 ----LKRSETQQYPNDVLNMLKDPELEGVN 330
R T++ D + PE++ N
Sbjct: 917 GPGKCYRLYTERAYRDEMLTTNVPEIQRTN 946
Score = 93 (37.8 bits), Expect = 1.8e-19, Sum P(2) = 1.8e-19
Identities = 16/36 (44%), Positives = 27/36 (75%)
Query: 49 MLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+LE R+ LP Y++++ ++ V +NQI ++ GETGSG
Sbjct: 580 ILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSG 615
Score = 41 (19.5 bits), Expect = 4.5e-14, Sum P(2) = 4.5e-14
Identities = 13/48 (27%), Positives = 18/48 (37%)
Query: 70 RNNQITVISGETGS-GP--PLHLDFITLKRSETQQYPNDVLNMLKDPE 114
R N + + ET P P HL ++ E L + DPE
Sbjct: 373 RRNLVGETNEETSMRNPDRPTHLSLVSAPEVEDDSLERKRLTRISDPE 420
>MGI|MGI:1306823 [details] [associations]
symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide 8"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
MGI:MGI:1306823 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AL590994 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 InterPro:IPR022967 SMART:SM00316 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN CTD:1659
OrthoDB:EOG4D26P2 EMBL:BC132445 EMBL:AL591436 IPI:IPI00461304
RefSeq:NP_659080.2 UniGene:Mm.28186 ProteinModelPortal:A2A4P0
SMR:A2A4P0 PaxDb:A2A4P0 PRIDE:A2A4P0 DNASU:217207
Ensembl:ENSMUST00000039152 GeneID:217207 KEGG:mmu:217207
UCSC:uc007lpr.1 InParanoid:A2A4P0 NextBio:375641 Bgee:A2A4P0
Genevestigator:A2A4P0 Uniprot:A2A4P0
Length = 1244
Score = 222 (83.2 bits), Expect = 1.8e-19, Sum P(2) = 1.8e-19
Identities = 63/150 (42%), Positives = 84/150 (56%)
Query: 189 ILVFLPGWDTINS----LHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRK 244
ILVFL G + I++ L+ M +S + I+P++S LP+ Q IF+ P G RK
Sbjct: 800 ILVFLTGQEEIDTACEILYERM-KSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRK 858
Query: 245 IVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT 304
+V+ATNIAETS+TID I YVVD G K ++ K I L IS A AKQR GRAGRT
Sbjct: 859 VVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRT 918
Query: 305 ----LKRSETQQYPNDVLNMLKDPELEGVN 330
R T++ D + PE++ N
Sbjct: 919 GPGKCYRLYTERAYRDEMLTTNVPEIQRTN 948
Score = 93 (37.8 bits), Expect = 1.8e-19, Sum P(2) = 1.8e-19
Identities = 16/36 (44%), Positives = 27/36 (75%)
Query: 49 MLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+LE R+ LP Y++++ ++ V +NQI ++ GETGSG
Sbjct: 582 ILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSG 617
Score = 43 (20.2 bits), Expect = 2.8e-14, Sum P(2) = 2.8e-14
Identities = 22/83 (26%), Positives = 38/83 (45%)
Query: 26 DPVLDAAFKKEMIRKLQSRRYQ-EMLEARKKLPSYQMRDAVLDMVRNNQITVIS--GETG 82
DPV+ +KE +R+L Q + AR L ++ AV D+++ + + S G+
Sbjct: 103 DPVVKPKTEKEKLRELFPVLCQPDNPSARTMLDEEDVKVAV-DVLKELEALMPSAAGQEK 161
Query: 83 SGPPLHLDFITLKRSETQQYPND 105
P H D T K+ ++ D
Sbjct: 162 QRDPEHRDR-TKKKKRSRSRDRD 183
Score = 41 (19.5 bits), Expect = 4.5e-14, Sum P(2) = 4.5e-14
Identities = 13/48 (27%), Positives = 18/48 (37%)
Query: 70 RNNQITVISGETGS-GP--PLHLDFITLKRSETQQYPNDVLNMLKDPE 114
R N + + ET P P HL ++ E L + DPE
Sbjct: 375 RRNLVGETNEETSMRNPDRPTHLSLVSAPEVEDDSLERKRLTRISDPE 422
>ASPGD|ASPL0000006947 [details] [associations]
symbol:AN5827 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:BN001301 EMBL:AACD01000100 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K12813
OMA:RIDDHRD OrthoDB:EOG4SBJ63 RefSeq:XP_663431.1
ProteinModelPortal:Q5B0V3 EnsemblFungi:CADANIAT00007219
GeneID:2871194 KEGG:ani:AN5827.2 Uniprot:Q5B0V3
Length = 1128
Score = 208 (78.3 bits), Expect = 2.3e-19, Sum P(2) = 2.3e-19
Identities = 61/161 (37%), Positives = 89/161 (55%)
Query: 189 ILVFLPGWDTINSLHRSMCQSS--FFNSSRFQII-PLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVFL G + I + +S+ +++ N II P+++ LP+ Q IF P RK+
Sbjct: 693 ILVFLTGQEEIEAAEQSLQETARKLGNKIPEMIICPIYANLPSDLQAKIFEPTPPKARKV 752
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT- 304
VLATNIAETS+TID IVYV+D G K + F+ + + +L S A+A QR GRAGR
Sbjct: 753 VLATNIAETSLTIDGIVYVIDPGFVKENVFNPRTGMESLVVTPCSRASANQRAGRAGRVG 812
Query: 305 ---LKRSETQ-QYPNDVLNMLKDPELEGVNNDVIFSLLQHI 341
R T+ Y N+ L PE++ N + +L+ +
Sbjct: 813 PGKCFRLYTKWAYYNE-LEESTTPEIQRTNLSSVILMLKSL 852
Score = 106 (42.4 bits), Expect = 2.3e-19, Sum P(2) = 2.3e-19
Identities = 20/46 (43%), Positives = 30/46 (65%)
Query: 44 RRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHL 89
++ Q + + RKKLP YQ RD ++ V ++Q+ +I GETGSG L
Sbjct: 469 QKAQTIEDTRKKLPIYQFRDQIIQAVHDHQVLIIVGETGSGKTTQL 514
>DICTYBASE|DDB_G0285213 [details] [associations]
symbol:dhx15 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA;ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0285213 GO:GO:0005524
GenomeReviews:CM000153_GR GO:GO:0008380 GO:GO:0006397 GO:GO:0005681
GO:GO:0003676 EMBL:AAFI02000076 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 KO:K12820 OMA:TVLQIHA RefSeq:XP_638323.1
ProteinModelPortal:Q54NJ4 EnsemblProtists:DDB0233403 GeneID:8624993
KEGG:ddi:DDB_G0285213 Uniprot:Q54NJ4
Length = 727
Score = 197 (74.4 bits), Expect = 2.7e-19, Sum P(2) = 2.7e-19
Identities = 57/157 (36%), Positives = 87/157 (55%)
Query: 189 ILVFLPGWDTI-NSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
ILVFL G + I ++ + ++ + +PL+S LP Q IF+T E RK ++
Sbjct: 289 ILVFLTGEEEIEDTCAKIQRETRERGLPPMKTLPLYSSLPIYQQSKIFDTCKE--RKCIV 346
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLK- 306
+TNIAETS+TID IV+VVD G +K ++ + + +L IS A+A QR GRAGRT
Sbjct: 347 STNIAETSLTIDGIVFVVDPGFSKQKTYNPRSRVESLLVAPISKASANQRAGRAGRTRPG 406
Query: 307 ---RSETQQYPNDVLNMLKDPELEGVN-NDVIFSLLQ 339
R T++ +++ PE+ N V+ LL+
Sbjct: 407 KCFRLYTEKAFKELMIQQTHPEILRSNLASVVLQLLK 443
Score = 112 (44.5 bits), Expect = 2.7e-19, Sum P(2) = 2.7e-19
Identities = 23/76 (30%), Positives = 46/76 (60%)
Query: 10 LTHSVTSWETRQKLLNDPVLDAAFKKEMIRKLQ-SRRYQEMLEARKKLPSYQMRDAVLDM 68
+T++ T+ T N+ + + + +K S+RY E+LE RK+LP ++ ++ + +
Sbjct: 30 ITNTTTTTTTTNNNYNNIKSNLTIDQWIPKKETFSKRYYEILEKRKELPVWKQKEDFIKV 89
Query: 69 VRNNQITVISGETGSG 84
++ NQ+ ++ GETGSG
Sbjct: 90 IKENQVVILVGETGSG 105
>UNIPROTKB|F1S1H3 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN CTD:1659 EMBL:FP102477 RefSeq:XP_003131427.2
Ensembl:ENSSSCT00000018917 GeneID:100517118 KEGG:ssc:100517118
Uniprot:F1S1H3
Length = 1212
Score = 222 (83.2 bits), Expect = 2.7e-19, Sum P(2) = 2.7e-19
Identities = 63/150 (42%), Positives = 84/150 (56%)
Query: 189 ILVFLPGWDTINS----LHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRK 244
ILVFL G + I++ L+ M +S + I+P++S LP+ Q IF+ P G RK
Sbjct: 768 ILVFLTGQEEIDTACEILYERM-KSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRK 826
Query: 245 IVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT 304
+V+ATNIAETS+TID I YVVD G K ++ K I L IS A AKQR GRAGRT
Sbjct: 827 VVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRT 886
Query: 305 ----LKRSETQQYPNDVLNMLKDPELEGVN 330
R T++ D + PE++ N
Sbjct: 887 GPGKCYRLYTERAYRDEMLTTNVPEIQRTN 916
Score = 91 (37.1 bits), Expect = 2.7e-19, Sum P(2) = 2.7e-19
Identities = 15/36 (41%), Positives = 27/36 (75%)
Query: 49 MLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
++E R+ LP Y++++ ++ V +NQI ++ GETGSG
Sbjct: 550 IIEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSG 585
Score = 41 (19.5 bits), Expect = 4.2e-14, Sum P(2) = 4.2e-14
Identities = 13/48 (27%), Positives = 18/48 (37%)
Query: 70 RNNQITVISGETGS-GP--PLHLDFITLKRSETQQYPNDVLNMLKDPE 114
R N + + ET P P HL ++ E L + DPE
Sbjct: 343 RRNLVGETNEETSMRNPDRPTHLSLVSAPEVEDDSLERKRLTRISDPE 390
>UNIPROTKB|E2R9R9 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN CTD:1659 EMBL:AAEX03006434 EMBL:AAEX03006433
RefSeq:XP_537627.2 ProteinModelPortal:E2R9R9
Ensembl:ENSCAFT00000023129 GeneID:480507 KEGG:cfa:480507
Uniprot:E2R9R9
Length = 1216
Score = 222 (83.2 bits), Expect = 2.7e-19, Sum P(2) = 2.7e-19
Identities = 63/150 (42%), Positives = 84/150 (56%)
Query: 189 ILVFLPGWDTINS----LHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRK 244
ILVFL G + I++ L+ M +S + I+P++S LP+ Q IF+ P G RK
Sbjct: 772 ILVFLTGQEEIDTACEILYERM-KSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRK 830
Query: 245 IVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT 304
+V+ATNIAETS+TID I YVVD G K ++ K I L IS A AKQR GRAGRT
Sbjct: 831 VVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRT 890
Query: 305 ----LKRSETQQYPNDVLNMLKDPELEGVN 330
R T++ D + PE++ N
Sbjct: 891 GPGKCYRLYTERAYRDEMLTTNVPEIQRTN 920
Score = 91 (37.1 bits), Expect = 2.7e-19, Sum P(2) = 2.7e-19
Identities = 15/36 (41%), Positives = 27/36 (75%)
Query: 49 MLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
++E R+ LP Y++++ ++ V +NQI ++ GETGSG
Sbjct: 554 IIEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSG 589
Score = 41 (19.5 bits), Expect = 4.3e-14, Sum P(2) = 4.3e-14
Identities = 13/48 (27%), Positives = 18/48 (37%)
Query: 70 RNNQITVISGETGS-GP--PLHLDFITLKRSETQQYPNDVLNMLKDPE 114
R N + + ET P P HL ++ E L + DPE
Sbjct: 347 RRNLVGETNEETSMRNPDRPTHLSLVSAPEVEDDSLERKRLTRISDPE 394
>UNIPROTKB|F1MEM4 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
OMA:NAWCYEN EMBL:DAAA02049231 EMBL:DAAA02049230 IPI:IPI00695401
Ensembl:ENSBTAT00000010976 Uniprot:F1MEM4
Length = 1230
Score = 222 (83.2 bits), Expect = 2.8e-19, Sum P(2) = 2.8e-19
Identities = 63/150 (42%), Positives = 84/150 (56%)
Query: 189 ILVFLPGWDTINS----LHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRK 244
ILVFL G + I++ L+ M +S + I+P++S LP+ Q IF+ P G RK
Sbjct: 786 ILVFLTGQEEIDTACEILYERM-KSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRK 844
Query: 245 IVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT 304
+V+ATNIAETS+TID I YVVD G K ++ K I L IS A AKQR GRAGRT
Sbjct: 845 VVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRT 904
Query: 305 ----LKRSETQQYPNDVLNMLKDPELEGVN 330
R T++ D + PE++ N
Sbjct: 905 GPGKCYRLYTERAYRDEMLTTNVPEIQRTN 934
Score = 91 (37.1 bits), Expect = 2.8e-19, Sum P(2) = 2.8e-19
Identities = 15/36 (41%), Positives = 27/36 (75%)
Query: 49 MLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
++E R+ LP Y++++ ++ V +NQI ++ GETGSG
Sbjct: 568 IIEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSG 603
Score = 41 (19.5 bits), Expect = 4.4e-14, Sum P(2) = 4.4e-14
Identities = 13/48 (27%), Positives = 18/48 (37%)
Query: 70 RNNQITVISGETGS-GP--PLHLDFITLKRSETQQYPNDVLNMLKDPE 114
R N + + ET P P HL ++ E L + DPE
Sbjct: 361 RRNLVGETNEETSMRNPDRPTHLSLVSAPEVEDDSLERKRLTRISDPE 408
>TAIR|locus:2197965 [details] [associations]
symbol:AT1G26370 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
IPI:IPI00532541 RefSeq:NP_173961.3 UniGene:At.15978
ProteinModelPortal:F4IE66 SMR:F4IE66 PRIDE:F4IE66
EnsemblPlants:AT1G26370.1 GeneID:839179 KEGG:ath:AT1G26370
OMA:ADISTNI Uniprot:F4IE66
Length = 717
Score = 219 (82.2 bits), Expect = 2.8e-19, Sum P(3) = 2.8e-19
Identities = 61/157 (38%), Positives = 83/157 (52%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFN--SSRFQIIPL--HSMLPTVSQKSIFNTPPEGVRK 244
ILVFL G D I S+ R + Q N + +++PL S LP+ Q +F P G RK
Sbjct: 294 ILVFLTGQDEIESVER-LVQERLQNIPEDKRKLLPLAIFSALPSEQQMKVFAPAPTGFRK 352
Query: 245 IVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT 304
++LATNIAETSITI I YV+D G K ++D + +L S A QR GRAGR
Sbjct: 353 VILATNIAETSITIPGIRYVIDPGFVKARSYDPSKGMESLDVVPASKAQTLQRSGRAGRE 412
Query: 305 LKRSETQQYPNDVLNMLKD---PELEGVN-NDVIFSL 337
+ YP L+D PE++ N +++I L
Sbjct: 413 GPGKSFRLYPEREFEKLEDSTKPEIKRCNLSNIILQL 449
Score = 76 (31.8 bits), Expect = 2.8e-19, Sum P(3) = 2.8e-19
Identities = 16/43 (37%), Positives = 25/43 (58%)
Query: 47 QEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHL 89
Q++ E R+ LP + +++ V+ N I +I GETGSG L
Sbjct: 32 QKIAEHRRSLPIASVEKRLVEEVQKNDILIIVGETGSGKTTQL 74
Score = 51 (23.0 bits), Expect = 2.8e-19, Sum P(3) = 2.8e-19
Identities = 15/45 (33%), Positives = 28/45 (62%)
Query: 100 QQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVYCT 144
+Q+P D+L + PE + V+ ++ ++ Q I ++PG ILV+ T
Sbjct: 258 RQFPVDILYTVH-PESDYVDATLV-TIFQ-IHFEEKPGDILVFLT 299
>ZFIN|ZDB-GENE-030131-8589 [details] [associations]
symbol:dhx16 "DEAH (Asp-Glu-Ala-His) box
polypeptide 16" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0035987
"endodermal cell differentiation" evidence=IMP] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-030131-8589 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 HOVERGEN:HBG039428 CTD:8449 OrthoDB:EOG4VHK5Q
GO:GO:0035987 EMBL:BC045393 IPI:IPI00495801 RefSeq:NP_956318.1
UniGene:Dr.76186 ProteinModelPortal:Q7ZVV8 STRING:Q7ZVV8
PRIDE:Q7ZVV8 GeneID:336645 KEGG:dre:336645 InParanoid:Q7ZVV8
NextBio:20811846 ArrayExpress:Q7ZVV8 Bgee:Q7ZVV8 Uniprot:Q7ZVV8
Length = 1054
Score = 224 (83.9 bits), Expect = 2.8e-19, Sum P(2) = 2.8e-19
Identities = 50/118 (42%), Positives = 72/118 (61%)
Query: 189 ILVFLPGWDTINS---LHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
+LVFL G + I + L + C+ S ++P+++ LP+ Q IFN P G RK+
Sbjct: 624 VLVFLTGQEEIEACCELLQERCRRLGSKISELLVLPIYANLPSDMQAKIFNPTPPGARKV 683
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
V+ATNIAETS+TID I+YV+D G K +++ K + +L S A+A QR GRAGR
Sbjct: 684 VVATNIAETSLTIDGIIYVIDPGFCKQKSYNAKTGMESLIVTPCSRASANQRAGRAGR 741
Score = 87 (35.7 bits), Expect = 2.8e-19, Sum P(2) = 2.8e-19
Identities = 19/57 (33%), Positives = 32/57 (56%)
Query: 44 RRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHLDFITLKRSETQ 100
++ Q + E R+ LP + R+ +L + ++QI VI GETGSG + L+ T+
Sbjct: 400 KQKQSIQEVRRSLPIFPYREDLLAAIGDHQILVIEGETGSGKTTQIPQYLLEEGYTK 456
>UNIPROTKB|F5H3Y4 [details] [associations]
symbol:DHX37 "Probable ATP-dependent RNA helicase DHX37"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 IPI:IPI00217630 HGNC:HGNC:17210
EMBL:AC093719 ProteinModelPortal:F5H3Y4 SMR:F5H3Y4
Ensembl:ENST00000544745 ArrayExpress:F5H3Y4 Bgee:F5H3Y4
Uniprot:F5H3Y4
Length = 962
Score = 228 (85.3 bits), Expect = 3.2e-19, Sum P(2) = 3.2e-19
Identities = 43/86 (50%), Positives = 58/86 (67%)
Query: 219 IIPLHSMLPTVSQKSIFNTPPEGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVK 278
++PL+S+L Q +F PPEG R V+ATN+AETS+TI I YVVDCGK K +D
Sbjct: 377 VLPLYSLLAPEKQAQVFKPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKVKKRYYDRV 436
Query: 279 DNIATLKPEWISLANAKQRRGRAGRT 304
+++ + W+S A+A QR GRAGRT
Sbjct: 437 TGVSSFRVTWVSQASADQRAGRAGRT 462
Score = 81 (33.6 bits), Expect = 3.2e-19, Sum P(2) = 3.2e-19
Identities = 20/58 (34%), Positives = 28/58 (48%)
Query: 27 PVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
P L A K + + R EM E R KLP +++ V + I ++ GETGSG
Sbjct: 11 PPLPRALAKPAVF-IPVNRSPEMQEERLKLPILSEEQVIMEAVAEHPIVIVCGETGSG 67
>TAIR|locus:2033723 [details] [associations]
symbol:ESP3 "ENHANCED SILENCING PHENOTYPE 3" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=NAS] [GO:0008380 "RNA splicing" evidence=NAS]
[GO:0035194 "posttranscriptional gene silencing by RNA"
evidence=IMP] [GO:0016020 "membrane" evidence=IDA] [GO:0006306 "DNA
methylation" evidence=RCA] [GO:0006342 "chromatin silencing"
evidence=RCA] [GO:0007267 "cell-cell signaling" evidence=RCA]
[GO:0009616 "virus induced gene silencing" evidence=RCA]
[GO:0010267 "production of ta-siRNAs involved in RNA interference"
evidence=RCA] [GO:0035196 "production of miRNAs involved in gene
silencing by miRNA" evidence=RCA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0008380 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 GO:GO:0035194 OMA:GTLHREF EMBL:AY074318 EMBL:AY133872
IPI:IPI00543041 RefSeq:NP_174527.2 UniGene:At.40132
ProteinModelPortal:Q8VY00 IntAct:Q8VY00 PaxDb:Q8VY00 PRIDE:Q8VY00
EnsemblPlants:AT1G32490.1 GeneID:840143 KEGG:ath:AT1G32490
TAIR:At1g32490 InParanoid:Q8VY00 PhylomeDB:Q8VY00
ProtClustDB:CLSN2685836 ArrayExpress:Q8VY00 Genevestigator:Q8VY00
Uniprot:Q8VY00
Length = 1044
Score = 215 (80.7 bits), Expect = 3.3e-19, Sum P(2) = 3.3e-19
Identities = 63/158 (39%), Positives = 87/158 (55%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQ---IIPLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVF G + I + + ++ + I P+++ LP+ Q IF PEG RK+
Sbjct: 615 ILVFFTGQEEIETAEEILKHRIRGLGTKIRELIICPIYANLPSELQAKIFEPTPEGARKV 674
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTL 305
VLATNIAETS+TID I YVVD G +KM +++ + + +L IS A+A QR GRAGRT
Sbjct: 675 VLATNIAETSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLITPISKASATQRAGRAGRTS 734
Query: 306 K----RSETQ-QYPNDVLNMLKDPELEGVN-NDVIFSL 337
R T Y ND L PE++ N V+ +L
Sbjct: 735 PGKCYRLYTAFNYNND-LEENTVPEVQRTNLASVVLAL 771
Score = 96 (38.9 bits), Expect = 3.3e-19, Sum P(2) = 3.3e-19
Identities = 22/56 (39%), Positives = 32/56 (57%)
Query: 30 DAAFKKEMIRKLQSRR-YQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
DA K+ + L + +E+ E R+ LP Y RD +L V +Q+ VI G+TGSG
Sbjct: 377 DAMDAKQKSQDLAEKTALEELQEVRRSLPIYTYRDQLLKAVEEHQVLVIVGDTGSG 432
Score = 43 (20.2 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 15/58 (25%), Positives = 28/58 (48%)
Query: 11 THSVTSWETRQKLLNDPVLDA-AFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLD 67
T +T +K + V A A +K+ + L+ QE L+ R++ ++RD + D
Sbjct: 190 TRKLTEQTLSKKEKEEAVRRANALEKDDLYSLRKVSRQEYLKKREQKKLDELRDEIED 247
>SGD|S000000815 [details] [associations]
symbol:PRP22 "DEAH-box RNA-dependent ATPase/ATP-dependent RNA
helicase" species:4932 "Saccharomyces cerevisiae" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IMP] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000350 "generation of catalytic spliceosome for second
transesterification step" evidence=IDA;IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000386 "second spliceosomal transesterification
activity" evidence=IMP;IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000390 "spliceosomal complex disassembly"
evidence=IMP] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0071021 "U2-type post-spliceosomal complex"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 SGD:S000000815 GO:GO:0005524 KO:K01897
GO:GO:0003723 EMBL:BK006939 EMBL:U18778 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 HOGENOM:HOG000175261 GO:GO:0071007 InterPro:IPR022967
SMART:SM00316 GO:GO:0000390 GeneTree:ENSGT00700000104241 KO:K12818
GO:GO:0000350 RefSeq:NP_010931.3 GeneID:856734 KEGG:sce:YER015W
OrthoDB:EOG45TGW9 EMBL:X58681 PIR:S13643 RefSeq:NP_010929.3
ProteinModelPortal:P24384 SMR:P24384 DIP:DIP-655N IntAct:P24384
MINT:MINT-648209 STRING:P24384 PaxDb:P24384 EnsemblFungi:YER013W
GeneID:856732 KEGG:sce:YER013W CYGD:YER013w OMA:QITQYLD
NextBio:982846 Genevestigator:P24384 GermOnline:YER013W
GO:GO:0071021 Uniprot:P24384
Length = 1145
Score = 220 (82.5 bits), Expect = 3.8e-19, Sum P(2) = 3.8e-19
Identities = 55/119 (46%), Positives = 72/119 (60%)
Query: 189 ILVFLPGWDTINSLHRSMCQ--SSFFNS-SRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVFL G + I+S + + +S I+P++S LP+ Q IF P+G RK+
Sbjct: 694 ILVFLTGQEEIDSCCEILYDRVKTLGDSIGELLILPVYSALPSEIQSKIFEPTPKGSRKV 753
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT 304
V ATNIAETSITID I YVVD G K++ ++ + I L IS A A QR+GRAGRT
Sbjct: 754 VFATNIAETSITIDGIYYVVDPGFAKINIYNARAGIEQLIVSPISQAQANQRKGRAGRT 812
Score = 91 (37.1 bits), Expect = 3.8e-19, Sum P(2) = 3.8e-19
Identities = 25/66 (37%), Positives = 34/66 (51%)
Query: 21 QKLLNDPVLDAAFKKEMIRKLQ-SRRYQEMLEA-RKKLPSYQMRDAVLDMVRNNQITVIS 78
Q L N ++ K M + +R + A R+ LP Y MR ++ VR+NQ VI
Sbjct: 446 QMLKNQLIVTEWEKNRMNESISYGKRTSLPISAQRQTLPVYAMRSELIQAVRDNQFLVIV 505
Query: 79 GETGSG 84
GETGSG
Sbjct: 506 GETGSG 511
>UNIPROTKB|E1BNQ2 [details] [associations]
symbol:DHX37 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 KO:K14780 CTD:57647 EMBL:DAAA02045204
IPI:IPI00698261 RefSeq:NP_001192890.1 UniGene:Bt.8113 PRIDE:E1BNQ2
Ensembl:ENSBTAT00000027206 GeneID:529207 KEGG:bta:529207
OMA:ANCRDAL NextBio:20874985 Uniprot:E1BNQ2
Length = 1155
Score = 231 (86.4 bits), Expect = 4.0e-19, Sum P(2) = 4.0e-19
Identities = 43/86 (50%), Positives = 59/86 (68%)
Query: 219 IIPLHSMLPTVSQKSIFNTPPEGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVK 278
++PL+S+L Q +F PPEG R V+ATN+AETS+TI I YVVDCGK K ++D
Sbjct: 588 VLPLYSLLAPEKQAQVFQPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKVKKRHYDRV 647
Query: 279 DNIATLKPEWISLANAKQRRGRAGRT 304
+++ + W+S A+A QR GRAGRT
Sbjct: 648 TGVSSFRVTWVSQASADQRAGRAGRT 673
Score = 79 (32.9 bits), Expect = 4.0e-19, Sum P(2) = 4.0e-19
Identities = 17/40 (42%), Positives = 22/40 (55%)
Query: 45 RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
R EM E R KLP +++ V + I +I GETGSG
Sbjct: 239 RSPEMQEERLKLPILSEEQVIMEAVAEHPIVIICGETGSG 278
>RGD|1306837 [details] [associations]
symbol:Dhx37 "DEAH (Asp-Glu-Ala-His) box polypeptide 37"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
RGD:1306837 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074985 KO:K14780 CTD:57647
OMA:AKLQPRT OrthoDB:EOG4P2Q1J IPI:IPI00391385 RefSeq:NP_001099396.2
UniGene:Rn.24493 Ensembl:ENSRNOT00000030823 GeneID:288647
KEGG:rno:288647 UCSC:RGD:1306837 NextBio:628468 ArrayExpress:D4A1R0
Uniprot:D4A1R0
Length = 1150
Score = 229 (85.7 bits), Expect = 4.1e-19, Sum P(2) = 4.1e-19
Identities = 43/86 (50%), Positives = 58/86 (67%)
Query: 219 IIPLHSMLPTVSQKSIFNTPPEGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVK 278
++PL+S+L Q +F PPEG R V+ATN+AETS+TI I YVVDCGK K +D
Sbjct: 583 VLPLYSLLAPEKQAQVFKPPPEGTRLCVIATNVAETSLTIPGIKYVVDCGKVKKRYYDRV 642
Query: 279 DNIATLKPEWISLANAKQRRGRAGRT 304
+++ + W+S A+A QR GRAGRT
Sbjct: 643 TGVSSFRVTWVSQASADQRAGRAGRT 668
Score = 81 (33.6 bits), Expect = 4.1e-19, Sum P(2) = 4.1e-19
Identities = 17/40 (42%), Positives = 23/40 (57%)
Query: 45 RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
R EM E R KLP A+++ V + I ++ GETGSG
Sbjct: 237 RTPEMQEERLKLPILAEEQAIMEAVAEHPIVIVCGETGSG 276
>UNIPROTKB|G4N1N4 [details] [associations]
symbol:MGG_07501 "ATP-dependent RNA helicase DHX8"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:CM001233 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12813 RefSeq:XP_003711413.1
EnsemblFungi:MGG_07501T0 GeneID:2683421 KEGG:mgr:MGG_07501
Uniprot:G4N1N4
Length = 1016
Score = 219 (82.2 bits), Expect = 4.1e-19, Sum P(3) = 4.1e-19
Identities = 59/157 (37%), Positives = 87/157 (55%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQ---IIPLHSMLPTVSQKSIFNTPPEGVRKI 245
IL+FL G D I + + +++ SR + I P+++ LP+ Q IF PE RK+
Sbjct: 585 ILIFLTGQDEIEAAEMQITETARKLGSRVKELVICPIYANLPSELQSKIFEPTPENARKV 644
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTL 305
VLATNIAETS+TID IVYV+D G K + ++ ++ L S A+A QR GRAGR
Sbjct: 645 VLATNIAETSLTIDGIVYVIDPGYVKENVYNPATGMSNLVVVPCSRASANQRSGRAGRVG 704
Query: 306 KRSETQQYPNDV-LNMLKD---PELEGVN-NDVIFSL 337
+ Y +N +++ PE++ N N V+ L
Sbjct: 705 PGKCFRLYTKYAYMNEMEESTTPEIQRTNLNGVVLQL 741
Score = 91 (37.1 bits), Expect = 4.1e-19, Sum P(3) = 4.1e-19
Identities = 22/46 (47%), Positives = 24/46 (52%)
Query: 44 RRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHL 89
+R M E RK LP Y RD L + QI VI GETGSG L
Sbjct: 361 KRQLSMQETRKSLPIYVYRDEFLAALEQYQILVIVGETGSGKTTQL 406
Score = 41 (19.5 bits), Expect = 4.1e-19, Sum P(3) = 4.1e-19
Identities = 15/45 (33%), Positives = 24/45 (53%)
Query: 100 QQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVYCT 144
++YP D+ PE ++ I ++ Q I TTQ G IL++ T
Sbjct: 549 RRYPVDIY-YTPAPEANYLSA-AITTVFQ-IHTTQPKGDILIFLT 590
>UNIPROTKB|F1P306 [details] [associations]
symbol:LOC100858239 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967
SMART:SM00316 GeneTree:ENSGT00700000104241 EMBL:AADN02070153
EMBL:AADN02070154 IPI:IPI00591627 Ensembl:ENSGALT00000001801
OMA:AMANTAM Uniprot:F1P306
Length = 1168
Score = 222 (83.2 bits), Expect = 5.0e-19, Sum P(2) = 5.0e-19
Identities = 63/150 (42%), Positives = 84/150 (56%)
Query: 189 ILVFLPGWDTINS----LHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRK 244
ILVFL G + I++ L+ M +S + I+P++S LP+ Q IF+ P G RK
Sbjct: 724 ILVFLTGQEEIDTACEILYERM-KSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRK 782
Query: 245 IVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT 304
+V+ATNIAETS+TID I YVVD G K ++ K I L IS A AKQR GRAGRT
Sbjct: 783 VVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRT 842
Query: 305 ----LKRSETQQYPNDVLNMLKDPELEGVN 330
R T++ D + PE++ N
Sbjct: 843 GPGKCYRLYTERAYRDEMLTTNVPEIQRTN 872
Score = 88 (36.0 bits), Expect = 5.0e-19, Sum P(2) = 5.0e-19
Identities = 14/36 (38%), Positives = 27/36 (75%)
Query: 49 MLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
++E R+ LP +++++ ++ V +NQI ++ GETGSG
Sbjct: 506 IIEQRESLPIFRLKEQLIQAVHDNQILIVIGETGSG 541
Score = 38 (18.4 bits), Expect = 7.9e-14, Sum P(2) = 7.9e-14
Identities = 13/48 (27%), Positives = 17/48 (35%)
Query: 70 RNNQITVISGETGS-GP--PLHLDFITLKRSETQQYPNDVLNMLKDPE 114
R N + + ET P P HL + E L + DPE
Sbjct: 331 RRNLVGETNEETSMRNPDRPSHLSLVNAPEVEDDTLERKRLTRISDPE 378
>UNIPROTKB|Q8IY37 [details] [associations]
symbol:DHX37 "Probable ATP-dependent RNA helicase DHX37"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000201240 KO:K14780 EMBL:BC002575 EMBL:BC037964
EMBL:AB040950 IPI:IPI00217630 RefSeq:NP_116045.2 UniGene:Hs.107382
ProteinModelPortal:Q8IY37 SMR:Q8IY37 IntAct:Q8IY37 STRING:Q8IY37
PhosphoSite:Q8IY37 DMDM:38257651 PaxDb:Q8IY37 PRIDE:Q8IY37
Ensembl:ENST00000308736 GeneID:57647 KEGG:hsa:57647 UCSC:uc001ugy.3
CTD:57647 GeneCards:GC12M125431 HGNC:HGNC:17210 HPA:HPA047607
neXtProt:NX_Q8IY37 PharmGKB:PA27224 HOVERGEN:HBG051356
InParanoid:Q8IY37 OMA:AKLQPRT OrthoDB:EOG4P2Q1J PhylomeDB:Q8IY37
GenomeRNAi:57647 NextBio:64382 ArrayExpress:Q8IY37 Bgee:Q8IY37
CleanEx:HS_DHX37 Genevestigator:Q8IY37 GermOnline:ENSG00000150990
Uniprot:Q8IY37
Length = 1157
Score = 228 (85.3 bits), Expect = 5.4e-19, Sum P(2) = 5.4e-19
Identities = 43/86 (50%), Positives = 58/86 (67%)
Query: 219 IIPLHSMLPTVSQKSIFNTPPEGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVK 278
++PL+S+L Q +F PPEG R V+ATN+AETS+TI I YVVDCGK K +D
Sbjct: 590 VLPLYSLLAPEKQAQVFKPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKVKKRYYDRV 649
Query: 279 DNIATLKPEWISLANAKQRRGRAGRT 304
+++ + W+S A+A QR GRAGRT
Sbjct: 650 TGVSSFRVTWVSQASADQRAGRAGRT 675
Score = 81 (33.6 bits), Expect = 5.4e-19, Sum P(2) = 5.4e-19
Identities = 20/58 (34%), Positives = 28/58 (48%)
Query: 27 PVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
P L A K + + R EM E R KLP +++ V + I ++ GETGSG
Sbjct: 224 PPLPRALAKPAVF-IPVNRSPEMQEERLKLPILSEEQVIMEAVAEHPIVIVCGETGSG 280
>ASPGD|ASPL0000001852 [details] [associations]
symbol:AN6085 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005730
"nucleolus" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:BN001301 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:PGQEEID EnsemblFungi:CADANIAT00006930
Uniprot:C8V2M2
Length = 824
Score = 226 (84.6 bits), Expect = 5.4e-19, Sum P(3) = 5.4e-19
Identities = 50/118 (42%), Positives = 76/118 (64%)
Query: 189 ILVFLPGWDTINSLHRSMCQ-SSFFNSS--RFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVFL G +T+ +L + + ++ + S + Q++PL + LP +Q+ +F P RKI
Sbjct: 405 ILVFLTGQETVEALENLVNEYATGMDPSLPKIQVLPLFAALPQAAQQRVFVPAPPRTRKI 464
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+LATNIAETS+T+ + YVVDCGK K+ F + + +L + IS + A QR+GRAGR
Sbjct: 465 ILATNIAETSVTVSGVRYVVDCGKAKIKQFRTRLGLDSLLVKPISKSAAIQRKGRAGR 522
Score = 79 (32.9 bits), Expect = 5.4e-19, Sum P(3) = 5.4e-19
Identities = 19/54 (35%), Positives = 29/54 (53%)
Query: 33 FKKEMIRKLQS--RRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
FK E + S ++ Q + E RK LP + D + +R N + ++ GETGSG
Sbjct: 122 FKDEENGRTASLKKKAQMLYEIRKNLPIFAHGDEIRQHLRKNDVMLLIGETGSG 175
Score = 40 (19.1 bits), Expect = 5.4e-19, Sum P(3) = 5.4e-19
Identities = 7/21 (33%), Positives = 14/21 (66%)
Query: 117 GVNNDVIFSLLQHICTTQRPG 137
GVN D++ L+++ + +R G
Sbjct: 296 GVNVDLVMGFLRNLVSGKREG 316
>UNIPROTKB|E2RHZ3 [details] [associations]
symbol:DHX37 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 KO:K14780 CTD:57647 OMA:AKLQPRT
EMBL:AAEX03014623 RefSeq:XP_534640.2 Ensembl:ENSCAFT00000011159
GeneID:477442 KEGG:cfa:477442 NextBio:20852918 Uniprot:E2RHZ3
Length = 1149
Score = 231 (86.4 bits), Expect = 6.3e-19, Sum P(2) = 6.3e-19
Identities = 43/86 (50%), Positives = 59/86 (68%)
Query: 219 IIPLHSMLPTVSQKSIFNTPPEGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVK 278
++PL+S+L Q +F PPEG R V+ATN+AETS+TI I YVVDCGK K ++D
Sbjct: 584 VLPLYSLLAPEKQAQVFQPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKVKKRHYDRV 643
Query: 279 DNIATLKPEWISLANAKQRRGRAGRT 304
+++ + W+S A+A QR GRAGRT
Sbjct: 644 TGVSSFRVTWVSQASADQRAGRAGRT 669
Score = 77 (32.2 bits), Expect = 6.3e-19, Sum P(2) = 6.3e-19
Identities = 16/40 (40%), Positives = 22/40 (55%)
Query: 45 RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
R EM E R KLP +++ V + I ++ GETGSG
Sbjct: 235 RTPEMQEERLKLPILAEEQVIMEAVAEHPIVIVCGETGSG 274
>UNIPROTKB|G4NGS5 [details] [associations]
symbol:MGG_04040 "DEAH box polypeptide 37" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
EMBL:CM001236 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K14780
RefSeq:XP_003719802.1 ProteinModelPortal:G4NGS5
EnsemblFungi:MGG_04040T0 GeneID:2677154 KEGG:mgr:MGG_04040
Uniprot:G4NGS5
Length = 1185
Score = 234 (87.4 bits), Expect = 6.4e-19, Sum P(2) = 6.4e-19
Identities = 45/90 (50%), Positives = 61/90 (67%)
Query: 215 SRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSN 274
SR ++PL+S+LPT Q +F PP+G R +VLATN+AETS+TI I YV D G++K
Sbjct: 673 SRMHVLPLYSLLPTKEQLRVFEPPPDGSRLVVLATNVAETSLTIPGIRYVFDSGRSKERK 732
Query: 275 FDVKDNIATLKPEWISLANAKQRRGRAGRT 304
+D + + + WIS A+A QR GRAGRT
Sbjct: 733 YDQLTGVQSFEVGWISKASANQREGRAGRT 762
Score = 74 (31.1 bits), Expect = 6.4e-19, Sum P(2) = 6.4e-19
Identities = 15/40 (37%), Positives = 21/40 (52%)
Query: 45 RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
R E+ AR LP +++ + NN I V+ G TGSG
Sbjct: 346 RSPEIQSARLALPVVSEEQRIMEAIHNNNIVVVCGATGSG 385
>FB|FBgn0086895 [details] [associations]
symbol:pea "peanuts" species:7227 "Drosophila melanogaster"
[GO:0007286 "spermatid development" evidence=IMP] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC;ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IC] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AE013599
GO:GO:0005524 GO:GO:0022008 GO:GO:0007286 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0000381 InterPro:IPR022967 SMART:SM00316
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN EMBL:BT044222
RefSeq:NP_610928.1 UniGene:Dm.12451 SMR:A1Z9L3 STRING:A1Z9L3
EnsemblMetazoa:FBtr0087518 GeneID:36561 KEGG:dme:Dmel_CG8241
UCSC:CG8241-RA CTD:36561 FlyBase:FBgn0086895 InParanoid:A1Z9L3
OrthoDB:EOG437PVS GenomeRNAi:36561 NextBio:799212 Uniprot:A1Z9L3
Length = 1242
Score = 214 (80.4 bits), Expect = 6.8e-19, Sum P(2) = 6.8e-19
Identities = 61/150 (40%), Positives = 85/150 (56%)
Query: 189 ILVFLPGWDTINS----LHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRK 244
IL+FL G + I++ L+ M +S + I+P++S LP+ Q IF+ P G RK
Sbjct: 797 ILLFLTGQEEIDTACEILYERM-KSLGPDVPELIILPVYSALPSEMQTRIFDPAPAGSRK 855
Query: 245 IVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT 304
+V+ATNIAETS+TID I YVVD G K ++ K + +L IS A AKQR GRAGRT
Sbjct: 856 VVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQAAAKQRAGRAGRT 915
Query: 305 ----LKRSETQQYPNDVLNMLKDPELEGVN 330
R T++ D + PE++ N
Sbjct: 916 GPGKTYRLYTERAYRDEMLPTPVPEIQRTN 945
Score = 212 (79.7 bits), Expect = 1.1e-18, Sum P(2) = 1.1e-18
Identities = 75/228 (32%), Positives = 115/228 (50%)
Query: 94 LKRSETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVYCTYTFMGVSPM 153
L +E + Y V+ ML + ++ DV+F LL+ +RP L+ + T V
Sbjct: 692 LMEAELKSY--SVI-MLDEAHERTIHTDVLFGLLK-TAVQKRPELKLIVTSATLDAVKFS 747
Query: 154 KVFFCKNVLQ---RL--MKGVGANSPKR------WVKLLRSMLVVP---ILVFLPGWDTI 199
+ FF + R ++ + P+ + +++ L P IL+FL G + I
Sbjct: 748 QYFFKAPIFTIPGRTFPVEVLYTKEPETDYLDASLITVMQIHLREPPGDILLFLTGQEEI 807
Query: 200 NSLHRSMCQ---SSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLATNIAETSI 256
++ + + S + I+P++S LP+ Q IF+ P G RK+V+ATNIAETS+
Sbjct: 808 DTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPAGSRKVVIATNIAETSL 867
Query: 257 TIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT 304
TID I YVVD G K ++ K + +L IS A AKQR GRAGRT
Sbjct: 868 TIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQAAAKQRAGRAGRT 915
Score = 96 (38.9 bits), Expect = 6.8e-19, Sum P(2) = 6.8e-19
Identities = 17/36 (47%), Positives = 27/36 (75%)
Query: 49 MLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
++E R+ LP Y++RD ++ V +NQI ++ GETGSG
Sbjct: 579 LVEQRQSLPIYKLRDDLIKAVTDNQILIVIGETGSG 614
>FB|FBgn0031631 [details] [associations]
symbol:CG3225 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:AE014134 GO:GO:0006200
GO:GO:0003676 GO:GO:0004386 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GO:GO:0016779 GeneTree:ENSGT00700000104241 KO:K13117 OMA:NIFVVPP
EMBL:AY069418 RefSeq:NP_608860.1 UniGene:Dm.300 SMR:Q9VR29
DIP:DIP-18193N IntAct:Q9VR29 MINT:MINT-288733
EnsemblMetazoa:FBtr0077416 GeneID:33680 KEGG:dme:Dmel_CG3225
UCSC:CG3225-RA FlyBase:FBgn0031631 InParanoid:Q9VR29
OrthoDB:EOG4H189P GenomeRNAi:33680 NextBio:784751 Uniprot:Q9VR29
Length = 678
Score = 217 (81.4 bits), Expect = 7.4e-19, Sum P(2) = 7.4e-19
Identities = 52/118 (44%), Positives = 71/118 (60%)
Query: 189 ILVFLPGWDTINS---LHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
IL FL G + + L R SS +++P++ + + Q S+F TPP+G RK+
Sbjct: 264 ILAFLTGQEEVLEALDLLREYIASS--EQENLKVLPMYGSMSSTDQLSVFFTPPKGTRKV 321
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
VLATNIAETSITI IVYV+DCG K+ ++ K +L +S A+A QR GRAGR
Sbjct: 322 VLATNIAETSITIPGIVYVIDCGYVKVKWYNPKTCSDSLVIVPVSKASAIQRAGRAGR 379
Score = 85 (35.0 bits), Expect = 7.4e-19, Sum P(2) = 7.4e-19
Identities = 15/36 (41%), Positives = 25/36 (69%)
Query: 49 MLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
++E R++LP Q RD +L + +Q+ ++ GETGSG
Sbjct: 40 LMEQRERLPIRQYRDQILYCLEKHQVVILVGETGSG 75
>DICTYBASE|DDB_G0270110 [details] [associations]
symbol:dhx33 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
dictyBase:DDB_G0270110 GO:GO:0005524 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K14781 RefSeq:XP_646548.1
EnsemblProtists:DDB0233404 GeneID:8617514 KEGG:ddi:DDB_G0270110
InParanoid:Q55CD3 OMA:EICINRE Uniprot:Q55CD3
Length = 730
Score = 228 (85.3 bits), Expect = 1.1e-18, Sum P(3) = 1.1e-18
Identities = 76/236 (32%), Positives = 106/236 (44%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSF---FNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVFL G D I +L + + S + P+ S LP Q +F P+G RK+
Sbjct: 299 ILVFLTGRDEIENLEKLLLDRIPRLPVGSKDLIVCPIFSALPQEQQMKVFEKAPKGSRKV 358
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTL 305
+LATNIAETS+TI+ I YVVD G K F+ K I +L IS A+AKQR GRAGR
Sbjct: 359 ILATNIAETSLTINGIRYVVDSGAVKSKIFNPKIGIDSLNIIPISKASAKQRTGRAGREF 418
Query: 306 KRSETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILV-FL---PGWDTIN 361
+ + Y + L + + I +++ + T + FL P I
Sbjct: 419 EGKCYRLYTQETFEKLDTSSIPEIKRSNIANVILQLKTIGINDILSFDFLESPPVASVIK 478
Query: 362 SLHRSMCQSSFFNSCLLYEF----AMVDNKPKEIITVRDCLSFECKPSTAKIIKEL 413
SL C + ++ L E A+ P T+ + FEC II L
Sbjct: 479 SLELLFCLDAISDNGSLTELGKKMALFPLDPMYSKTLIKSIEFECSEEVLIIISIL 534
Score = 74 (31.1 bits), Expect = 1.1e-18, Sum P(3) = 1.1e-18
Identities = 22/83 (26%), Positives = 39/83 (46%)
Query: 2 KSPHSPKGLTHSVTSWETRQKLLNDPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQM 61
KS HS KG Q++ ND + D K + ++ +E+ ++ LP +
Sbjct: 20 KSIHSNKGKFELKKKPVQLQQISNDKINDNNNLKNQL-EIPKEIPKEIKLQKESLPVFTA 78
Query: 62 RDAVLDMVRNNQITVISGETGSG 84
+DA+L + + +I ETG+G
Sbjct: 79 KDALLKNFKEHSTVIIISETGTG 101
Score = 37 (18.1 bits), Expect = 1.1e-18, Sum P(3) = 1.1e-18
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 118 VNNDVIFSLLQHI 130
+N DV+F LL+ I
Sbjct: 200 LNTDVLFGLLKSI 212
>DICTYBASE|DDB_G0291183 [details] [associations]
symbol:dhx8 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA;ISS]
[GO:0006396 "RNA processing" evidence=ISS] [GO:0005681
"spliceosomal complex" evidence=IEA;ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
dictyBase:DDB_G0291183 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0005681 GenomeReviews:CM000154_GR GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 EMBL:AAFI02000175
InterPro:IPR022967 SMART:SM00316 KO:K12818 OMA:NAWCYEN
RefSeq:XP_635385.1 HSSP:P05055 ProteinModelPortal:Q54F05
EnsemblProtists:DDB0233399 GeneID:8628033 KEGG:ddi:DDB_G0291183
ProtClustDB:CLSZ2846610 Uniprot:Q54F05
Length = 1160
Score = 220 (82.5 bits), Expect = 1.4e-18, Sum P(3) = 1.4e-18
Identities = 62/151 (41%), Positives = 88/151 (58%)
Query: 189 ILVFLPGWDTINS----LHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRK 244
IL+FL G + I++ L+ M +S N I+P++S LP+ Q IF P G RK
Sbjct: 719 ILLFLTGQEEIDAACQILYERM-KSLGSNVPDLIILPVYSALPSEMQTKIFEPAPPGSRK 777
Query: 245 IVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT 304
+V+ATNIAETS+TID I YV+D G +K F+ K+ + +L IS A A+QR GRAGRT
Sbjct: 778 VVIATNIAETSLTIDGIYYVIDPGFSKQKCFNPKNGMDSLVVAPISQAAARQRSGRAGRT 837
Query: 305 ----LKRSETQQ-YPNDVLNMLKDPELEGVN 330
R T+ + N++L PE++ N
Sbjct: 838 GPGKCYRLYTESAFKNEMLAS-SIPEIQRTN 867
Score = 83 (34.3 bits), Expect = 1.4e-18, Sum P(3) = 1.4e-18
Identities = 16/34 (47%), Positives = 23/34 (67%)
Query: 51 EARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
E R+ LP + +R+A L V +Q+ V+ GETGSG
Sbjct: 503 EQRESLPIFPLREAFLQAVSEHQLLVVIGETGSG 536
Score = 45 (20.9 bits), Expect = 1.4e-18, Sum P(3) = 1.4e-18
Identities = 12/39 (30%), Positives = 22/39 (56%)
Query: 17 WETRQKLLNDPVLDAAFKKEMIRKLQSRRYQEMLEARKK 55
W+ + K+++ P+ D K+E+ RK Q + E R+K
Sbjct: 144 WD-QGKIVDVPIDDEKTKEELKRKQQDMDREFEREQREK 181
>SGD|S000001794 [details] [associations]
symbol:PRP16 "DEAH-box RNA helicase involved in second
catalytic step of splicing" species:4932 "Saccharomyces cerevisiae"
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0000350 "generation of catalytic
spliceosome for second transesterification step" evidence=IMP]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0071007 "U2-type catalytic step 2 spliceosome" evidence=IDA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IDA]
[GO:0000386 "second spliceosomal transesterification activity"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000001794 GO:GO:0005524 GO:GO:0003676
EMBL:BK006944 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0071007 EMBL:Z27116 GO:GO:0008186
RefSeq:NP_013012.3 GeneID:853961 KEGG:sce:YKR086W KO:K12815
GO:GO:0000350 GeneTree:ENSGT00700000104877 OrthoDB:EOG4GQTD2
EMBL:M31524 EMBL:Z28311 PIR:S38164 RefSeq:NP_013014.3
ProteinModelPortal:P15938 SMR:P15938 DIP:DIP-2824N IntAct:P15938
MINT:MINT-1699731 STRING:P15938 PaxDb:P15938 PeptideAtlas:P15938
EnsemblFungi:YKR086W GeneID:853963 KEGG:sce:YKR088C CYGD:YKR086w
OMA:IDCGYSK NextBio:975386 Genevestigator:P15938 GermOnline:YKR086W
Uniprot:P15938
Length = 1071
Score = 216 (81.1 bits), Expect = 1.5e-18, Sum P(2) = 1.5e-18
Identities = 69/217 (31%), Positives = 108/217 (49%)
Query: 145 YTFMGVS-PMKVFFCKNVLQRLMKGVGANSPKRWVKLLRSMLVVPILVFLPGWD----TI 199
+T G + P++ + N +Q ++ + + K + L IL+F+ G + T
Sbjct: 523 FTIPGRTFPVQTIYTSNPVQDYVEAAVSQAVK--IHLANDCSSGDILIFMTGQEDIETTF 580
Query: 200 NSLHRSMCQ--SSFFNSSRFQ------IIPLHSMLPTVSQKSIFNTPPEGVRKIVLATNI 251
++L Q S F ++ F+ I+P++S LP Q IF RKI++ATNI
Sbjct: 581 DTLQEKFLQVYSKKFGTANFEEINDIEILPIYSALPADLQFKIFQDLHGTKRKIIIATNI 640
Query: 252 AETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRSETQ 311
AETS+TI I YV+DCG +K+ ++ K + +L IS ANA QR GRAGRT + +
Sbjct: 641 AETSLTIKGIRYVIDCGYSKLKVYNPKIGLDSLVITPISKANADQRSGRAGRTAPGTAYR 700
Query: 312 QYPNDVLN---MLKD-PELEGVNNDVIFSLLQHICTT 344
Y D L+ PE++ N LL+ + T
Sbjct: 701 LYTEDTFKEDMYLQTIPEIQRTNLSNTLLLLKSLDVT 737
Score = 89 (36.4 bits), Expect = 1.5e-18, Sum P(2) = 1.5e-18
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 48 EMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHL 89
++ +++LP ++ R +L ++R NQ+ VI GETGSG L
Sbjct: 342 DIKHTKEQLPVFRCRSQLLSLIRENQVVVIIGETGSGKTTQL 383
>UNIPROTKB|O83538 [details] [associations]
symbol:TP_0526 "ATP-dependent helicase (HrpA)"
species:243276 "Treponema pallidum subsp. pallidum str. Nichols"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AE000520
GenomeReviews:AE000520_GR PIR:H71312 RefSeq:NP_218966.1
ProteinModelPortal:O83538 IntAct:O83538 GeneID:2610764
KEGG:tpa:TP0526 PATRIC:20531093 OMA:WEYRERF ProtClustDB:CLSK507866
Uniprot:O83538
Length = 668
Score = 227 (85.0 bits), Expect = 1.8e-18, Sum P(2) = 1.8e-18
Identities = 53/141 (37%), Positives = 79/141 (56%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL+FLPG +I + + +F + ++PL+ L Q+ +FN P G RK+V+A
Sbjct: 228 ILIFLPGERSIKNCITRLSHERWFR--KLFLLPLYGRLSKEEQEQVFNRAPFGKRKVVIA 285
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAETSITIDD+ V+D G K+++++ A+L IS A+ QRRGRAGR +
Sbjct: 286 TNIAETSITIDDVTTVIDSGLVKLNSYNPLSYTASLDETPISQASCNQRRGRAGRVRAGT 345
Query: 309 ETQQYPNDVLNMLKDPELEGV 329
+ Y D + LE +
Sbjct: 346 CYRLYSRDDFEQREPYTLEEI 366
Score = 70 (29.7 bits), Expect = 1.8e-18, Sum P(2) = 1.8e-18
Identities = 13/39 (33%), Positives = 21/39 (53%)
Query: 54 KKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHLDFI 92
K+LP Y +D +L + ++ + V+ TGSG L I
Sbjct: 5 KQLPVYSQKDKILSALAHHHVIVVESPTGSGKTTQLPLI 43
>UNIPROTKB|G4NBP1 [details] [associations]
symbol:MGG_00523 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase PRP2" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CM001235 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 RefSeq:XP_003718533.1 EnsemblFungi:MGG_00523T0
GeneID:2674513 KEGG:mgr:MGG_00523 Uniprot:G4NBP1
Length = 803
Score = 214 (80.4 bits), Expect = 2.2e-18, Sum P(2) = 2.2e-18
Identities = 66/188 (35%), Positives = 103/188 (54%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSS---RFQIIPLHSMLPTVSQKSIFNTPPEG-VRK 244
ILVFL G + I + R + + + +S + + +PL L +Q + F P +G VRK
Sbjct: 382 ILVFLYGQEPIEEIQRLIEEYAATLASDVPKIKALPLFGQLSMEAQHTAFR-PLKGRVRK 440
Query: 245 IVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT 304
+VLATNIAETS+T+ + YV+D GK+KM + + +L + IS ++A QR GRAGR
Sbjct: 441 VVLATNIAETSVTVPGVRYVIDTGKSKMKQYRASLGLESLLVDAISKSSAIQRAGRAGRE 500
Query: 305 LKRSETQQYPNDVLNMLKDPEL-EGVNNDVIFSLLQHICTTQRPGAILVFLPGWDT--IN 361
+ Y DV ++D +L E + N+V + L I + +L F P DT I+
Sbjct: 501 APGKCYRLYTEDVYKEMRDADLPEILRNNVREAAL--IMMARGVDDLLTF-PLMDTPKIS 557
Query: 362 SLHRSMCQ 369
+ ++M Q
Sbjct: 558 RMEKAMVQ 565
Score = 86 (35.3 bits), Expect = 2.2e-18, Sum P(2) = 2.2e-18
Identities = 16/46 (34%), Positives = 29/46 (63%)
Query: 39 RKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+ +Q++ +L RK LP +Q + A+ + +R N + ++ GETGSG
Sbjct: 100 KPIQAKGDPSLLPLRKALPIWQHQGAIREHLRKNDVLILVGETGSG 145
Score = 81 (33.6 bits), Expect = 0.00085, Sum P(2) = 0.00085
Identities = 26/93 (27%), Positives = 51/93 (54%)
Query: 273 SNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRSETQQYPNDVLNMLKDPELEGVNND 332
+N + +N ++ P+ A A+ G+A +TLK E +Q+P ++++ K + + ++
Sbjct: 310 ANIETLENFFSI-PQDDRKAKAESD-GKAEQTLK-IEGRQFPVEIIHSPKPVPV--LADE 364
Query: 333 VIFSLLQHICTTQRPGAILVFLPGWDTINSLHR 365
V+ ++ + C PG ILVFL G + I + R
Sbjct: 365 VVKTVFKIHCGEPLPGDILVFLYGQEPIEEIQR 397
>UNIPROTKB|E1C9C2 [details] [associations]
symbol:DHX37 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 OMA:AKLQPRT EMBL:AADN02034854
IPI:IPI00601367 Ensembl:ENSGALT00000004688 Uniprot:E1C9C2
Length = 1145
Score = 223 (83.6 bits), Expect = 2.4e-18, Sum P(3) = 2.4e-18
Identities = 43/86 (50%), Positives = 57/86 (66%)
Query: 219 IIPLHSMLPTVSQKSIFNTPPEGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVK 278
++PL+S+L Q +F PP G R V+ATN+AETS+TI I YVVDCGK K +D
Sbjct: 579 VLPLYSLLAPEKQAKVFRPPPPGTRLCVVATNVAETSLTIPGIKYVVDCGKVKKRFYDKI 638
Query: 279 DNIATLKPEWISLANAKQRRGRAGRT 304
+++ + WIS A+A QR GRAGRT
Sbjct: 639 TGVSSFRVTWISQASANQRAGRAGRT 664
Score = 85 (35.0 bits), Expect = 2.4e-18, Sum P(3) = 2.4e-18
Identities = 18/40 (45%), Positives = 23/40 (57%)
Query: 45 RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
R E+ EAR KLP +++ + N I VI GETGSG
Sbjct: 231 RSPEIQEARLKLPILAEEQVIMEAINENPIVVICGETGSG 270
Score = 37 (18.1 bits), Expect = 2.4e-18, Sum P(3) = 2.4e-18
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 189 ILVFLPGWDTINSLHRSM 206
ILVFL G ++SL R +
Sbjct: 462 ILVFLTGQAEVHSLCRRL 479
>POMBASE|SPAPB1A10.06c [details] [associations]
symbol:SPAPB1A10.06c "ATP-dependent RNA helicase Dhr1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISM] [GO:0005524 "ATP binding" evidence=ISM] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0030490 "maturation of SSU-rRNA" evidence=ISO] [GO:0032040
"small-subunit processome" evidence=ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPAPB1A10.06c
GO:GO:0005524 EMBL:CU329670 GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 GO:GO:0032040
GO:GO:0030490 HOGENOM:HOG000201240 KO:K14780 OMA:HQLKREE
OrthoDB:EOG4KM2B8 EMBL:AB027915 RefSeq:NP_593520.1
ProteinModelPortal:Q9HDY4 STRING:Q9HDY4
EnsemblFungi:SPAPB1A10.06c.1 GeneID:2543371 KEGG:spo:SPAPB1A10.06c
NextBio:20804386 Uniprot:Q9HDY4
Length = 1183
Score = 237 (88.5 bits), Expect = 3.2e-18, Sum P(2) = 3.2e-18
Identities = 67/213 (31%), Positives = 107/213 (50%)
Query: 98 ETQQYPNDV-LNMLKDPELEGVNNDVIFSLLQHICTTQR--P-GAILVYCTYTFMGVSPM 153
+ +QYP + N P D + +C + P G+ILV+ T G +
Sbjct: 589 DARQYPVSIHFNRTTKP-------DYLQDAFDKVCLIHKRLPAGSILVFLT----GQQEV 637
Query: 154 KVFFCKNVLQRLMKGVGANSPKRWVKLLRSMLVVPILVFLPGWDTINSLHRSMCQSSFFN 213
+ C+ + +R ++ + + + R + V + I+ + S S ++
Sbjct: 638 EQL-CQMLRKRFVRSFRPLKSRARIVVSRKTMSVENEDLQSETEDIDQVPTSSSSSVTYD 696
Query: 214 --SSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLATNIAETSITIDDIVYVVDCGKTK 271
S ++PL+S+L T Q +F++ PEG R ++ATN+AETSITI +I YVVDCGK K
Sbjct: 697 DESEPMYVLPLYSLLTTEDQMKVFDSSPEGHRMCIVATNVAETSITIPNIRYVVDCGKAK 756
Query: 272 MSNFDVKDNIATLKPEWISLANAKQRRGRAGRT 304
++ K ++ + WIS ANA QR GRAGRT
Sbjct: 757 ERVYNEKTSVQKFEVRWISKANADQRAGRAGRT 789
Score = 64 (27.6 bits), Expect = 3.2e-18, Sum P(2) = 3.2e-18
Identities = 14/45 (31%), Positives = 22/45 (48%)
Query: 45 RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHL 89
R E+ E+R LP +++ + N + +I G TGSG L
Sbjct: 387 RPPEIQESRLALPIVAEEQRIMEQIFANDVVIICGATGSGKTTQL 431
>TAIR|locus:2065210 [details] [associations]
symbol:AT2G47250 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020 GO:GO:0008380
GO:GO:0006397 GO:GO:0009941 GO:GO:0003676 EMBL:AC002337
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
EMBL:AY128301 EMBL:BT004534 IPI:IPI00540033 PIR:H84912
RefSeq:NP_182247.1 UniGene:At.36388 ProteinModelPortal:O22899
SMR:O22899 PaxDb:O22899 PRIDE:O22899 EnsemblPlants:AT2G47250.1
GeneID:819338 KEGG:ath:AT2G47250 GeneFarm:1798 TAIR:At2g47250
InParanoid:O22899 KO:K12820 OMA:XEIDEAC PhylomeDB:O22899
ProtClustDB:CLSN2683587 Genevestigator:O22899 GermOnline:AT2G47250
Uniprot:O22899
Length = 729
Score = 196 (74.1 bits), Expect = 3.9e-18, Sum P(2) = 3.9e-18
Identities = 54/126 (42%), Positives = 75/126 (59%)
Query: 189 ILVFLPGWDTINSLHRSMCQ--SSFFNS-SRFQIIPLHSMLPTVSQKSIFNTPP----EG 241
ILVFL G + I R + + S+ + +++PL+S LP Q+ IF+ P EG
Sbjct: 282 ILVFLTGEEEIEDACRKINKEVSNLGDQVGPVKVVPLYSTLPPAMQQKIFDPAPVPLTEG 341
Query: 242 V---RKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRR 298
RKIV++TNIAETS+TID IVYV+D G K ++ + + +L IS A+A QR
Sbjct: 342 GPAGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRS 401
Query: 299 GRAGRT 304
GRAGRT
Sbjct: 402 GRAGRT 407
Score = 102 (41.0 bits), Expect = 3.9e-18, Sum P(2) = 3.9e-18
Identities = 24/64 (37%), Positives = 36/64 (56%)
Query: 40 KLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG-----PPLHLDFITL 94
K S+RY E+LE R+ LP + +D L+ + +NQ ++ GETGSG P LD +
Sbjct: 49 KAYSQRYFEILEKRRDLPVWLQKDDFLNTLNSNQTLILVGETGSGKTTQIPQFVLDAVVA 108
Query: 95 KRSE 98
S+
Sbjct: 109 DNSD 112
>SGD|S000003088 [details] [associations]
symbol:PRP43 "RNA helicase in the DEAH-box family"
species:4932 "Saccharomyces cerevisiae" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=IMP;IDA] [GO:0000390 "spliceosomal
complex disassembly" evidence=IGI;IDA] [GO:0030490 "maturation of
SSU-rRNA" evidence=IGI] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IDA] [GO:0071014 "post-mRNA
release spliceosomal complex" evidence=IMP] [GO:0006364 "rRNA
processing" evidence=IMP] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0042273 "ribosomal large subunit biogenesis" evidence=IMP]
[GO:0000462 "maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 SGD:S000003088
GO:GO:0005739 GO:GO:0005524 EMBL:BK006941 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0000463
GO:GO:0004004 HOGENOM:HOG000175261 GO:GO:0000390 GO:GO:0000466
GO:GO:0000462 KO:K12820 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
OrthoDB:EOG4S7NZ4 GO:GO:0071014 EMBL:U41851 EMBL:Z72642 PIR:S64130
RefSeq:NP_011395.1 PDB:2XAU PDB:3KX2 PDBsum:2XAU PDBsum:3KX2
ProteinModelPortal:P53131 SMR:P53131 DIP:DIP-5152N IntAct:P53131
MINT:MINT-497996 STRING:P53131 PaxDb:P53131 PeptideAtlas:P53131
PRIDE:P53131 EnsemblFungi:YGL120C GeneID:852757 KEGG:sce:YGL120C
CYGD:YGL120c EvolutionaryTrace:P53131 NextBio:972201
Genevestigator:P53131 GermOnline:YGL120C Uniprot:P53131
Length = 767
Score = 187 (70.9 bits), Expect = 4.2e-18, Sum P(2) = 4.2e-18
Identities = 52/126 (41%), Positives = 69/126 (54%)
Query: 189 ILVFLPGWDTINSLHR--SMCQSSFFNSSR---FQIIPLHSMLPTVSQKSIFNTPPEGV- 242
IL+FL G D I R S+ + PL+ LP Q+ IF PE
Sbjct: 306 ILLFLTGEDEIEDAVRKISLEGDQLVREEGCGPLSVYPLYGSLPPHQQQRIFEPAPESHN 365
Query: 243 ----RKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRR 298
RK+V++TNIAETS+TID IVYVVD G +K ++ + + +L IS A+A+QR
Sbjct: 366 GRPGRKVVISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASAQQRA 425
Query: 299 GRAGRT 304
GRAGRT
Sbjct: 426 GRAGRT 431
Score = 112 (44.5 bits), Expect = 4.2e-18, Sum P(2) = 4.2e-18
Identities = 31/77 (40%), Positives = 42/77 (54%)
Query: 8 KGLTHSVTSWETRQKLLNDPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLD 67
KGL TS E QKL D ++ +E K Y ++L+ R++LP + RD L
Sbjct: 51 KGLQRHHTSAEEAQKL-EDGKINPFTGREFTPK-----YVDILKIRRELPVHAQRDEFLK 104
Query: 68 MVRNNQITVISGETGSG 84
+ +NNQI V GETGSG
Sbjct: 105 LYQNNQIMVFVGETGSG 121
>TAIR|locus:2095989 [details] [associations]
symbol:AT3G62310 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009560 "embryo sac egg
cell differentiation" evidence=RCA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005829 GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0005730 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 EMBL:AL162507 KO:K12820
ProtClustDB:CLSN2683587 OMA:TVLQIHA EMBL:AY120782 EMBL:BT010331
IPI:IPI00540868 PIR:T48023 RefSeq:NP_191790.1 UniGene:At.34140
UniGene:At.4777 ProteinModelPortal:Q9LZQ9 SMR:Q9LZQ9 IntAct:Q9LZQ9
PaxDb:Q9LZQ9 PRIDE:Q9LZQ9 EnsemblPlants:AT3G62310.1 GeneID:825404
KEGG:ath:AT3G62310 TAIR:At3g62310 InParanoid:Q9LZQ9
PhylomeDB:Q9LZQ9 ArrayExpress:Q9LZQ9 Genevestigator:Q9LZQ9
Uniprot:Q9LZQ9
Length = 726
Score = 199 (75.1 bits), Expect = 4.6e-18, Sum P(2) = 4.6e-18
Identities = 53/126 (42%), Positives = 73/126 (57%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSR---FQIIPLHSMLPTVSQKSIFNTPPEGV--- 242
ILVFL G + I R + + + +++PL+S LP Q+ IF+ PE V
Sbjct: 278 ILVFLTGEEEIEDACRKINKEVGNLGDQVGPIKVVPLYSTLPPAMQQKIFDPAPEPVTEG 337
Query: 243 ----RKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRR 298
RKIV++TNIAETS+TID IVYV+D G K ++ + + +L IS A+A QR
Sbjct: 338 GPPGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRS 397
Query: 299 GRAGRT 304
GRAGRT
Sbjct: 398 GRAGRT 403
Score = 98 (39.6 bits), Expect = 4.6e-18, Sum P(2) = 4.6e-18
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 40 KLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
K S+RY ++LE R+ LP + ++ L + NNQ ++ GETGSG
Sbjct: 45 KPYSQRYYDILEKRRTLPVWLQKEEFLKTLNNNQTLILVGETGSG 89
>SGD|S000001561 [details] [associations]
symbol:DHR2 "Predominantly nucleolar DEAH-box ATP-dependent
RNA helicase" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0003724 "RNA helicase activity"
evidence=IDA] [GO:0042254 "ribosome biogenesis" evidence=IDA;TAS]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000001561 GO:GO:0005524 GO:GO:0005730
EMBL:BK006944 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GO:GO:0003724 GO:GO:0000462 EMBL:AF005090 EMBL:L15328 EMBL:X75560
EMBL:Z28078 PIR:S37903 RefSeq:NP_012845.1 ProteinModelPortal:P36009
SMR:P36009 DIP:DIP-6424N IntAct:P36009 MINT:MINT-677951
STRING:P36009 PaxDb:P36009 PeptideAtlas:P36009 EnsemblFungi:YKL078W
GeneID:853784 KEGG:sce:YKL078W CYGD:YKL078w KO:K14781 OMA:PGQEEID
OrthoDB:EOG4F7RTB NextBio:974906 Genevestigator:P36009
GermOnline:YKL078W Uniprot:P36009
Length = 735
Score = 191 (72.3 bits), Expect = 5.0e-18, Sum P(3) = 5.0e-18
Identities = 57/157 (36%), Positives = 84/157 (53%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQI-----IPLHSMLPTVSQKSIFNTPPEGV- 242
IL FLPG + I+ M + + + S + PL++ LP V Q +F P +G
Sbjct: 295 ILCFLPGQEEIDKAVTIMEKIAKYVSDEAPVPLIVPYPLYAALPAVQQSLVF-APIKGFK 353
Query: 243 RKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAG 302
RK+V +TNIAETS+TI + +VVD G K+ + + +ATL IS A+A QR GRAG
Sbjct: 354 RKVVFSTNIAETSVTISGVKFVVDSGLRKVKVWRHQLGLATLLTVPISQASAMQRSGRAG 413
Query: 303 RTLKRSETQQY-PNDVLNMLKDPELEGVNNDVIFSLL 338
R + + Y +D + + K E E +DV +L
Sbjct: 414 RESEGKSFRLYCESDYVKLPKQSEPEIARSDVTSPVL 450
Score = 107 (42.7 bits), Expect = 5.0e-18, Sum P(3) = 5.0e-18
Identities = 26/81 (32%), Positives = 46/81 (56%)
Query: 26 DPVLDAAFKKEMI---RKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETG 82
D V D KE + + L+SR ++L+ R+ LP YQ + ++ + +N +TV+ GETG
Sbjct: 49 DHVSDQRSNKENVLTYKSLKSRA-SDLLKMRETLPVYQHKREIMSYIESNPVTVLIGETG 107
Query: 83 SGPPLHL-DFITLKRSETQQY 102
SG + F+ K +T+++
Sbjct: 108 SGKSTQIPQFVLEKLYDTKKH 128
Score = 40 (19.1 bits), Expect = 5.0e-18, Sum P(3) = 5.0e-18
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 389 KEIITVRDCLSFECKPSTAKIIKE 412
K +I VRD L CK + I +E
Sbjct: 605 KNVIRVRDQLRVYCKRLFSSISEE 628
>POMBASE|SPBC16H5.10c [details] [associations]
symbol:prp43 "ATP-dependent RNA helicase Prp43
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000390
"spliceosomal complex disassembly" evidence=ISO] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISO;ISS] [GO:0005524
"ATP binding" evidence=ISM] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005681 "spliceosomal complex" evidence=ISO] [GO:0006364 "rRNA
processing" evidence=ISS] [GO:0030686 "90S preribosome"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 PomBase:SPBC16H5.10c GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0005681 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 GO:GO:0000390 KO:K12820 OMA:TVLQIHA
EMBL:AB027819 PIR:T39615 RefSeq:NP_595937.1
ProteinModelPortal:O42945 IntAct:O42945 STRING:O42945
EnsemblFungi:SPBC16H5.10c.1 GeneID:2540057 KEGG:spo:SPBC16H5.10c
OrthoDB:EOG4S7NZ4 NextBio:20801194 Uniprot:O42945
Length = 735
Score = 189 (71.6 bits), Expect = 5.7e-18, Sum P(2) = 5.7e-18
Identities = 51/126 (40%), Positives = 71/126 (56%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-----NSSRFQIIPLHSMLPTVSQKSIFNTPPEGV- 242
ILVFL G + I R + + + ++ PL+ LP Q+ IF PE
Sbjct: 288 ILVFLTGEEEIEDACRKITLEADDLVREGAAGPLKVYPLYGSLPPNQQQRIFEPTPEDTK 347
Query: 243 ----RKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRR 298
RK+V++TNIAETS+TID IVYVVD G +K ++ + + +L IS A+A+QR
Sbjct: 348 SGYGRKVVISTNIAETSLTIDGIVYVVDPGFSKQKIYNPRIRVESLLVSPISKASAQQRA 407
Query: 299 GRAGRT 304
GRAGRT
Sbjct: 408 GRAGRT 413
Score = 108 (43.1 bits), Expect = 5.7e-18, Sum P(2) = 5.7e-18
Identities = 30/79 (37%), Positives = 40/79 (50%)
Query: 6 SPKGLTHSVTSWETRQKLLNDPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAV 65
S KGLT T+ K P + F + S+ Y ++LE R++LP YQ R+
Sbjct: 31 SSKGLTRRATTVAQAAKAEEGP--NNFFNDKPF----SQNYFKILETRRELPVYQQREEF 84
Query: 66 LDMVRNNQITVISGETGSG 84
L + NQI V GETGSG
Sbjct: 85 LKIYHENQIIVFVGETGSG 103
>UNIPROTKB|G4NI12 [details] [associations]
symbol:MGG_17793 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0043581 "mycelium development"
evidence=IEP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 GO:GO:0043581
EMBL:CM001236 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 RefSeq:XP_003720239.1 EnsemblFungi:MGG_17793T0
GeneID:12987242 KEGG:mgr:MGG_17793 Uniprot:G4NI12
Length = 1430
Score = 224 (83.9 bits), Expect = 6.9e-18, Sum P(3) = 6.9e-18
Identities = 60/149 (40%), Positives = 81/149 (54%)
Query: 189 ILVFLPGWDTINSLHRSMC--QSSF--------FN-SSRFQIIPLHSMLPTVSQKSIFNT 237
ILVFLPG I S++ + Q S FN +S+F+I LHS + Q IF
Sbjct: 874 ILVFLPGIKEIRSVNDVLRDRQGSLGIDFKDINFNDTSKFRIHFLHSAVSAAEQNKIFQK 933
Query: 238 PPEGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQR 297
P G R+I+LA+NIAETS+TI D+V+VVD GKT+ +D I + W + + A QR
Sbjct: 934 VPLGCRRIILASNIAETSVTIPDVVHVVDVGKTRDRKYDRSTRITGMYTGWQTKSKAMQR 993
Query: 298 RGRAGRTLKRSETQQYPNDVLNMLKDPEL 326
+GRAGRT + Y +KD L
Sbjct: 994 QGRAGRTQEGHYYGLYSEQRRQSMKDDAL 1022
Score = 73 (30.8 bits), Expect = 6.9e-18, Sum P(3) = 6.9e-18
Identities = 21/79 (26%), Positives = 39/79 (49%)
Query: 20 RQKLLNDPVLDAAFKKEMIRKL---QSRRYQEMLEA-RKKLPSYQMRDAVLDMVRNNQIT 75
R+ L P+ ++ + + +L Q+ R+ E + A R LP + R +L++V +
Sbjct: 545 RRSLWMHPLARSSLNRRLAARLEAYQADRHLEHIRAQRASLPMNKHRKQLLNLVEGSHFC 604
Query: 76 VISGETGSGPPLHLDFITL 94
++ G TGSG + I L
Sbjct: 605 IVIGATGSGKSTQVPQIIL 623
Score = 47 (21.6 bits), Expect = 6.9e-18, Sum P(3) = 6.9e-18
Identities = 8/22 (36%), Positives = 15/22 (68%)
Query: 121 DVIFSLLQHICTTQRPGAILVY 142
D++ + + HI ++ PG ILV+
Sbjct: 856 DLVAATIAHIASSASPGDILVF 877
Score = 38 (18.4 bits), Expect = 2.6e-14, Sum P(3) = 2.6e-14
Identities = 14/46 (30%), Positives = 20/46 (43%)
Query: 9 GLTHSVTSWETRQKLLNDPVLDAAFKKEMIRKLQSRRYQEMLEARK 54
G T S S + Q +L+D + I LQ RR M A++
Sbjct: 608 GATGSGKSTQVPQIILDDAIKQGRGADTRILCLQPRRAAAMWVAQR 653
>ZFIN|ZDB-GENE-030131-4505 [details] [associations]
symbol:dhx37 "DEAH (Asp-Glu-Ala-His) box
polypeptide 37" species:7955 "Danio rerio" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-030131-4505 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00550000074985 KO:K14780
CTD:57647 HOVERGEN:HBG051356 OMA:AKLQPRT EMBL:CABZ01014508
EMBL:CABZ01038687 EMBL:CABZ01038688 EMBL:CABZ01038689
EMBL:CABZ01038690 EMBL:CABZ01038691 EMBL:CABZ01038692
EMBL:CABZ01038693 EMBL:CABZ01038694 EMBL:CABZ01038695
EMBL:CABZ01038696 EMBL:CU469504 EMBL:FP085395 IPI:IPI00488738
RefSeq:NP_001076473.2 UniGene:Dr.79711 Ensembl:ENSDART00000090731
Ensembl:ENSDART00000127153 GeneID:100009635 KEGG:dre:100009635
NextBio:20787816 Uniprot:B8JLP0
Length = 1152
Score = 221 (82.9 bits), Expect = 8.7e-18, Sum P(2) = 8.7e-18
Identities = 43/86 (50%), Positives = 57/86 (66%)
Query: 219 IIPLHSMLPTVSQKSIFNTPPEGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVK 278
++PL+S+L Q +F PP G R V+ATN+AETS+TI I YVVDCG+ K +D
Sbjct: 582 VLPLYSLLAPEQQAKVFRPPPAGSRLCVVATNVAETSLTIPGIKYVVDCGRVKKRFYDRV 641
Query: 279 DNIATLKPEWISLANAKQRRGRAGRT 304
+++ K WIS A+A QR GRAGRT
Sbjct: 642 TGVSSFKVTWISQASANQRAGRAGRT 667
Score = 77 (32.2 bits), Expect = 8.7e-18, Sum P(2) = 8.7e-18
Identities = 15/40 (37%), Positives = 25/40 (62%)
Query: 45 RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
R E+ EAR +LP +++ V++++ V+ GETGSG
Sbjct: 241 RLPEIQEARLRLPVLAEEQIIMEAVKDHECVVLCGETGSG 280
Score = 39 (18.8 bits), Expect = 7.7e-14, Sum P(2) = 7.7e-14
Identities = 10/38 (26%), Positives = 22/38 (57%)
Query: 18 ETRQKLLNDPVLDAAFKKEMIRKLQSRRYQEMLEARKK 55
+T+++ + PV KK+ + K Q + +++LE + K
Sbjct: 55 KTKKQKVERPVT----KKKALTKKQRKNLEKVLEQKDK 88
>SGD|S000004735 [details] [associations]
symbol:ECM16 "Essential DEAH-box ATP-dependent RNA helicase
specific to U3 snoRNP" species:4932 "Saccharomyces cerevisiae"
[GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0000462 "maturation
of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] [GO:0042254 "ribosome biogenesis"
evidence=IEA;IDA;TAS] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0030686 "90S
preribosome" evidence=IDA] [GO:0003724 "RNA helicase activity"
evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000004735 GO:GO:0005739 GO:GO:0005524
GO:GO:0005730 GO:GO:0003723 EMBL:BK006946 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0030686 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0032040 GO:GO:0008026
GO:GO:0003724 GO:GO:0000462 EMBL:Z48622 PIR:S53058
RefSeq:NP_013847.1 ProteinModelPortal:Q04217 SMR:Q04217
DIP:DIP-6722N IntAct:Q04217 MINT:MINT-614026 STRING:Q04217
PaxDb:Q04217 PeptideAtlas:Q04217 PRIDE:Q04217 EnsemblFungi:YMR128W
GeneID:855158 KEGG:sce:YMR128W CYGD:YMR128w
GeneTree:ENSGT00550000074985 HOGENOM:HOG000201240 KO:K14780
OMA:HQLKREE OrthoDB:EOG4KM2B8 NextBio:978575 Genevestigator:Q04217
GermOnline:YMR128W Uniprot:Q04217
Length = 1267
Score = 219 (82.2 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 39/86 (45%), Positives = 60/86 (69%)
Query: 219 IIPLHSMLPTVSQKSIFNTPPEGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVK 278
++PL+S+LPT Q +F PP+G R ++ATN+AETS+TI + YVVD G++K ++
Sbjct: 731 VLPLYSLLPTKEQMRVFQKPPQGSRLCIVATNVAETSLTIPGVRYVVDSGRSKERKYNES 790
Query: 279 DNIATLKPEWISLANAKQRRGRAGRT 304
+ + + + W+S A+A QR GRAGRT
Sbjct: 791 NGVQSFEVGWVSKASANQRSGRAGRT 816
Score = 79 (32.9 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 20/70 (28%), Positives = 39/70 (55%)
Query: 20 RQKLLNDPVLDA--AFKKEMIRK---LQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQI 74
R++ L+D + +A + RK ++ R E+ +AR +LP + +++ + +N +
Sbjct: 350 RKEDLDDGLQEAYVPINENSTRKAFYVEVSRSDEIQKARIQLPVFGEEHKIMEAIHHNDV 409
Query: 75 TVISGETGSG 84
+I GETGSG
Sbjct: 410 VIICGETGSG 419
>UNIPROTKB|F1RU83 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:GTLHREF EMBL:CU480634
Ensembl:ENSSSCT00000001498 Uniprot:F1RU83
Length = 1045
Score = 202 (76.2 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 46/118 (38%), Positives = 70/118 (59%)
Query: 189 ILVFLPGWDTINS---LHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVFL G + I + + + C+ ++P+++ LP+ Q IF P G RK+
Sbjct: 615 ILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKV 674
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
V+ATNIAETS+TI+ I+YV+D G K +++ + + +L S A+A QR GRAGR
Sbjct: 675 VVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGR 732
Score = 95 (38.5 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 33/115 (28%), Positives = 54/115 (46%)
Query: 42 QSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHLDFITLKRSETQQ 101
Q+++ + + R+ LP + R+ +L V N+QI +I GETGSG + + TQ+
Sbjct: 389 QAQQKESIQAVRRSLPVFPFREELLAAVANHQILIIEGETGSGKTTQIPQYLFEEGYTQK 448
Query: 102 -------YPNDVLNMLKDPELE---GVN--NDVIFSLLQHICTTQRPGAILVYCT 144
P V M + GV N+V +S+ CT++R +L Y T
Sbjct: 449 GMKIACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSER--TVLRYMT 501
>UNIPROTKB|Q767K6 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0008380
GO:GO:0006397 GO:GO:0003676 EMBL:AB113357 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AB113356 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 HOVERGEN:HBG039428 CTD:8449 OrthoDB:EOG4VHK5Q
RefSeq:NP_001116578.1 UniGene:Ssc.15273 ProteinModelPortal:Q767K6
GeneID:100144456 KEGG:ssc:100144456 Uniprot:Q767K6
Length = 1045
Score = 202 (76.2 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 46/118 (38%), Positives = 70/118 (59%)
Query: 189 ILVFLPGWDTINS---LHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVFL G + I + + + C+ ++P+++ LP+ Q IF P G RK+
Sbjct: 615 ILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKV 674
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
V+ATNIAETS+TI+ I+YV+D G K +++ + + +L S A+A QR GRAGR
Sbjct: 675 VVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGR 732
Score = 95 (38.5 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 33/115 (28%), Positives = 54/115 (46%)
Query: 42 QSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHLDFITLKRSETQQ 101
Q+++ + + R+ LP + R+ +L V N+QI +I GETGSG + + TQ+
Sbjct: 389 QAQQKESIQAVRRSLPVFPFREELLAAVANHQILIIEGETGSGKTTQIPQYLFEEGYTQK 448
Query: 102 -------YPNDVLNMLKDPELE---GVN--NDVIFSLLQHICTTQRPGAILVYCT 144
P V M + GV N+V +S+ CT++R +L Y T
Sbjct: 449 GMKIACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSER--TVLRYMT 501
>SGD|S000005294 [details] [associations]
symbol:PRP2 "RNA-dependent ATPase in the DEAH-box family"
species:4932 "Saccharomyces cerevisiae" [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008186 "RNA-dependent ATPase
activity" evidence=IDA] [GO:0071006 "U2-type catalytic step 1
spliceosome" evidence=IMP;IDA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0000349 "generation of catalytic spliceosome for
first transesterification step" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 SGD:S000005294
GO:GO:0005524 GO:GO:0005634 EMBL:BK006947 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:X77395
GO:GO:0000349 eggNOG:COG1643 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
OrthoDB:EOG4SBJ63 GO:GO:0008186 EMBL:X55936 EMBL:X55999 EMBL:Z71626
PIR:S12334 RefSeq:NP_014408.1 ProteinModelPortal:P20095 SMR:P20095
DIP:DIP-3961N IntAct:P20095 MINT:MINT-496813 STRING:P20095
PaxDb:P20095 EnsemblFungi:YNR011C GeneID:855745 KEGG:sce:YNR011C
CYGD:YNR011c KO:K12814 OMA:DDKIHIN NextBio:980148
Genevestigator:P20095 GermOnline:YNR011C Uniprot:P20095
Length = 876
Score = 191 (72.3 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 73/232 (31%), Positives = 108/232 (46%)
Query: 189 ILVFLPGWDTINSLHRSM--CQSSFFNSSRFQII-PLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVFL G + I + S + ++ II P+++ LP Q IF PE RK+
Sbjct: 438 ILVFLTGQEEIERTKTKLEEIMSKLGSRTKQMIITPIYANLPQEQQLKIFQPTPENCRKV 497
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT- 304
VLATNIAETS+TID I YV+D G K +++ + L S A+ QR GRAGR
Sbjct: 498 VLATNIAETSLTIDGIRYVIDPGFVKENSYVPSTGMTQLLTVPCSRASVDQRAGRAGRVG 557
Query: 305 ---LKRSETQ-QYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVFLPGWD-- 358
R T+ Y ++ L ++ PE+ N LL + T L+ P D
Sbjct: 558 PGKCFRIFTKWSYLHE-LELMPKPEITRTNLSNTVLLLLSLGVTD-----LIKFPLMDKP 611
Query: 359 TINSLHRSMCQSSFFNSCLLYEFAMVDNKPKEIITVRDCLSFECKPSTAKII 410
+I +L +S+ LY +++K + F C+P AK++
Sbjct: 612 SIPTLRKSLEN--------LYILGALNSKGTITRLGKMMCEFPCEPEFAKVL 655
Score = 104 (41.7 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 22/60 (36%), Positives = 34/60 (56%)
Query: 42 QSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHLDFITLKRSETQQ 101
+ +R + EARK LP +Q +D +L ++ NQ+ +I GETGSG L ++ T Q
Sbjct: 209 EEKRILTIQEARKLLPVHQYKDELLQEIKKNQVLIIMGETGSGKTTQLPQYLVEDGFTDQ 268
>DICTYBASE|DDB_G0287351 [details] [associations]
symbol:dhx37 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=ISS] [GO:0005732 "small nucleolar ribonucleoprotein
complex" evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0287351
GO:GO:0005524 GO:GO:0005730 GenomeReviews:CM000154_GR GO:GO:0003676
GO:GO:0042254 EMBL:AAFI02000100 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0003724 KO:K14780 GO:GO:0005732
RefSeq:XP_637255.1 STRING:Q54KG8 EnsemblProtists:DDB0235265
GeneID:8626085 KEGG:ddi:DDB_G0287351 InParanoid:Q54KG8 OMA:HERNLNT
Uniprot:Q54KG8
Length = 1461
Score = 222 (83.2 bits), Expect = 1.6e-17, Sum P(2) = 1.6e-17
Identities = 46/87 (52%), Positives = 62/87 (71%)
Query: 219 IIPLHSMLPTVSQKSIFNTPPEGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVK 278
++PL+S LPT Q +F TPP G R +V+ATN+AETS+TI +I YVVD G+ K ++ K
Sbjct: 848 VLPLYSTLPTSKQMRVFQTPPLGSRLVVVATNLAETSLTIPNIKYVVDTGRVKQRYYN-K 906
Query: 279 DN-IATLKPEWISLANAKQRRGRAGRT 304
DN I++ + W S A+A QR GRAGRT
Sbjct: 907 DNGISSFEVGWTSKASADQRAGRAGRT 933
Score = 76 (31.8 bits), Expect = 1.6e-17, Sum P(2) = 1.6e-17
Identities = 19/70 (27%), Positives = 37/70 (52%)
Query: 15 TSWETRQKLLNDPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQI 74
T ET + +++ V DA + + ++ R E+ R LP ++++ +++N +
Sbjct: 365 TGIETIEDAMSEEV-DAKPIEYNVFNVKVERKPEIDAVRDNLPIMLEEHSIVEKIKDNDV 423
Query: 75 TVISGETGSG 84
+I GETGSG
Sbjct: 424 VIICGETGSG 433
Score = 52 (23.4 bits), Expect = 4.9e-15, Sum P(2) = 4.9e-15
Identities = 13/46 (28%), Positives = 27/46 (58%)
Query: 32 AFKKEMIRKLQSRRYQEMLEA--RKKLPSYQMRDAVLDMVRNNQIT 75
A K+ + +K + R +E L+A RKK+ + R ++D ++ N ++
Sbjct: 5 ALKRALAKKKKLTR-EERLKATIRKKIDKHAERKVLMDQLQTNSMS 49
>CGD|CAL0004556 [details] [associations]
symbol:orf19.2090 species:5476 "Candida albicans" [GO:0030686
"90S preribosome" evidence=IEA] [GO:0032040 "small-subunit
processome" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0000462 "maturation
of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 CGD:CAL0004556 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AACQ01000031
EMBL:AACQ01000030 KO:K14780 RefSeq:XP_719536.1 RefSeq:XP_719660.1
STRING:Q5ACX7 GeneID:3638741 GeneID:3638820 KEGG:cal:CaO19.2090
KEGG:cal:CaO19.9637 Uniprot:Q5ACX7
Length = 1263
Score = 232 (86.7 bits), Expect = 1.8e-17, Sum P(3) = 1.8e-17
Identities = 41/86 (47%), Positives = 62/86 (72%)
Query: 219 IIPLHSMLPTVSQKSIFNTPPEGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVK 278
++PL+S+LPT Q +F PP G R ++ATN+AETS+TI I YVVDCG++K ++ +
Sbjct: 773 VLPLYSLLPTKQQMKVFEDPPPGSRICIVATNVAETSLTIPGIRYVVDCGRSKERKYNQE 832
Query: 279 DNIATLKPEWISLANAKQRRGRAGRT 304
+ + + + +W+S A+A QR GRAGRT
Sbjct: 833 NGVQSFEVDWVSKASANQRAGRAGRT 858
Score = 63 (27.2 bits), Expect = 1.8e-17, Sum P(3) = 1.8e-17
Identities = 15/53 (28%), Positives = 28/53 (52%)
Query: 35 KEMIRK---LQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
KEM R+ ++ R + + R LP + +++ V ++ ++ GETGSG
Sbjct: 419 KEMQRRAFVVEVNRTDSIQQQRALLPVFAEEHRIMEAVYHHDCIILCGETGSG 471
Score = 42 (19.8 bits), Expect = 1.8e-17, Sum P(3) = 1.8e-17
Identities = 14/45 (31%), Positives = 22/45 (48%)
Query: 175 KRWVKLLRSMLVVPILVFLPGWDTINSLHRSMCQS-SFFNSSRFQ 218
K+ K+ R + IL+FL G + I +L + + Q F S Q
Sbjct: 665 KKTCKIHRKLPEGGILIFLTGQNEITTLVKKLRQEFPFKKKSTIQ 709
>WB|WBGene00003393 [details] [associations]
symbol:mog-5 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0002009 "morphogenesis
of an epithelium" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0042127
"regulation of cell proliferation" evidence=IMP] [GO:0040020
"regulation of meiosis" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] [GO:0048589 "developmental growth" evidence=IMP]
[GO:0010172 "embryonic body morphogenesis" evidence=IMP]
[GO:0040022 "feminization of hermaphroditic germ-line"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006915
GO:GO:0002119 GO:GO:0008380 GO:GO:0018996 GO:GO:0006397
GO:GO:0040011 GO:GO:0003723 GO:GO:0042127 GO:GO:0007281
GO:GO:0048589 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0040022 GO:GO:0008026 EMBL:FO081042 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN EMBL:AF286899 PIR:T15921 RefSeq:NP_495019.1
UniGene:Cel.7556 ProteinModelPortal:Q09530 SMR:Q09530
DIP:DIP-25759N IntAct:Q09530 MINT:MINT-1046882 STRING:Q09530
PaxDb:Q09530 EnsemblMetazoa:EEED8.5 GeneID:173920
KEGG:cel:CELE_EEED8.5 UCSC:EEED8.5 CTD:173920 WormBase:EEED8.5
InParanoid:Q09530 NextBio:881669 Uniprot:Q09530
Length = 1200
Score = 214 (80.4 bits), Expect = 1.8e-17, Sum P(2) = 1.8e-17
Identities = 63/159 (39%), Positives = 89/159 (55%)
Query: 189 ILVFLPGWDTINS----LHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRK 244
+LVFL G + I++ L+ M +S + I+P++ LP+ Q IF+ P G RK
Sbjct: 751 VLVFLTGQEEIDTSCEVLYERM-KSMGPDVPELIILPVYGALPSEMQTRIFDPAPAGKRK 809
Query: 245 IVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT 304
+V+ATNIAETS+TID I YVVD G K ++ K + +L IS A AKQR GRAGRT
Sbjct: 810 VVIATNIAETSLTIDGIFYVVDPGFVKQKIYNPKSGMDSLVVTPISQAAAKQRSGRAGRT 869
Query: 305 ----LKRSETQQYPNDVLNMLKDPELEGVNNDVIFSLLQ 339
R T++ D + PE++ N + +LLQ
Sbjct: 870 GPGKCYRLYTERAFRDEMLPTPVPEIQRTN--LASTLLQ 906
Score = 82 (33.9 bits), Expect = 1.8e-17, Sum P(2) = 1.8e-17
Identities = 15/36 (41%), Positives = 26/36 (72%)
Query: 49 MLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
M+E R+ LP + ++ +++ + +NQI V+ GETGSG
Sbjct: 533 MVEQRESLPIFALKKNLMEAMIDNQILVVVGETGSG 568
>UNIPROTKB|Q09530 [details] [associations]
symbol:mog-5 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-5" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006915
GO:GO:0002119 GO:GO:0008380 GO:GO:0018996 GO:GO:0006397
GO:GO:0040011 GO:GO:0003723 GO:GO:0042127 GO:GO:0007281
GO:GO:0048589 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0040022 GO:GO:0008026 EMBL:FO081042 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN EMBL:AF286899 PIR:T15921 RefSeq:NP_495019.1
UniGene:Cel.7556 ProteinModelPortal:Q09530 SMR:Q09530
DIP:DIP-25759N IntAct:Q09530 MINT:MINT-1046882 STRING:Q09530
PaxDb:Q09530 EnsemblMetazoa:EEED8.5 GeneID:173920
KEGG:cel:CELE_EEED8.5 UCSC:EEED8.5 CTD:173920 WormBase:EEED8.5
InParanoid:Q09530 NextBio:881669 Uniprot:Q09530
Length = 1200
Score = 214 (80.4 bits), Expect = 1.8e-17, Sum P(2) = 1.8e-17
Identities = 63/159 (39%), Positives = 89/159 (55%)
Query: 189 ILVFLPGWDTINS----LHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRK 244
+LVFL G + I++ L+ M +S + I+P++ LP+ Q IF+ P G RK
Sbjct: 751 VLVFLTGQEEIDTSCEVLYERM-KSMGPDVPELIILPVYGALPSEMQTRIFDPAPAGKRK 809
Query: 245 IVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT 304
+V+ATNIAETS+TID I YVVD G K ++ K + +L IS A AKQR GRAGRT
Sbjct: 810 VVIATNIAETSLTIDGIFYVVDPGFVKQKIYNPKSGMDSLVVTPISQAAAKQRSGRAGRT 869
Query: 305 ----LKRSETQQYPNDVLNMLKDPELEGVNNDVIFSLLQ 339
R T++ D + PE++ N + +LLQ
Sbjct: 870 GPGKCYRLYTERAFRDEMLPTPVPEIQRTN--LASTLLQ 906
Score = 82 (33.9 bits), Expect = 1.8e-17, Sum P(2) = 1.8e-17
Identities = 15/36 (41%), Positives = 26/36 (72%)
Query: 49 MLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
M+E R+ LP + ++ +++ + +NQI V+ GETGSG
Sbjct: 533 MVEQRESLPIFALKKNLMEAMIDNQILVVVGETGSG 568
>DICTYBASE|DDB_G0285937 [details] [associations]
symbol:dhx16 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR002483 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01480
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0285937 GO:GO:0005524
GO:GO:0005634 GenomeReviews:CM000153_GR GO:GO:0008380 GO:GO:0006397
GO:GO:0003676 EMBL:AAFI02000082 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 Gene3D:1.20.1390.10 KO:K12813 GO:GO:0003724
RefSeq:XP_638017.1 EnsemblProtists:DDB0233398 GeneID:8625368
KEGG:ddi:DDB_G0285937 OMA:YLLEREV Uniprot:Q54MH3
Length = 1106
Score = 199 (75.1 bits), Expect = 3.1e-17, Sum P(2) = 3.1e-17
Identities = 48/118 (40%), Positives = 69/118 (58%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQ---IIPLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVFL G + ++ + + ++ + I ++S LPT Q IF P RK+
Sbjct: 678 ILVFLTGQEEVDQAAEMLQTRTRGLGTKIKELIITRIYSTLPTDLQAKIFEPTPPNARKV 737
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
VLATNIAETS+TID I+YV+D G K F+ + + +L +S A+A QR+GRAGR
Sbjct: 738 VLATNIAETSLTIDGIIYVIDPGFCKQKMFNPRTGMESLVITPVSRASANQRKGRAGR 795
Score = 95 (38.5 bits), Expect = 3.1e-17, Sum P(2) = 3.1e-17
Identities = 39/107 (36%), Positives = 53/107 (49%)
Query: 51 EARKKLPSYQMRDAVLDMVRNNQITVISGETGSGP----PLHLD---FI-TLKRSETQQY 102
E RK LP Y R+ ++D VR Q+ +I GETGSG P +L F T K TQ
Sbjct: 462 EVRKSLPVYPYREQLIDAVREYQVLIIVGETGSGKTTQIPQYLHEAGFSKTGKIGCTQ-- 519
Query: 103 PNDVLNM---LKDPELEG--VNNDVIFSLLQHICTTQRPGAILVYCT 144
P V M + E G + N+V +S+ CT+Q+ +L Y T
Sbjct: 520 PRRVAAMSVAARVAEEVGCKLGNEVGYSIRFEDCTSQK--TVLQYMT 564
>UNIPROTKB|F1SDW0 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:CU442751
Ensembl:ENSSSCT00000008044 Uniprot:F1SDW0
Length = 719
Score = 207 (77.9 bits), Expect = 3.2e-17, Sum P(2) = 3.2e-17
Identities = 50/150 (33%), Positives = 81/150 (54%)
Query: 189 ILVFLPGWDTINSLHRSMC-QSSFFNSS----RFQIIPLHSMLPTVSQKSIFNTPPEGVR 243
IL FL G + + ++ + Q+ + +++P+++ LP+ Q +F VR
Sbjct: 277 ILAFLTGQEEVETVVSMLIEQARALGRTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSVR 336
Query: 244 KIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
K+++ATN+AETSITI IVYV+DCG K+ ++ + I L +S A+A QR GRAGR
Sbjct: 337 KVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRAGR 396
Query: 304 TLKRSETQQYPNDVLNMLKD---PELEGVN 330
+ + Y D + L PE++ N
Sbjct: 397 SRSGKCYRLYTEDAFDQLPQSTVPEMQRSN 426
Score = 81 (33.6 bits), Expect = 3.2e-17, Sum P(2) = 3.2e-17
Identities = 15/34 (44%), Positives = 24/34 (70%)
Query: 51 EARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+ R+KLP +++R+ +L ++ N Q VI GETG G
Sbjct: 49 QQRQKLPVFKLRNHILYLIENYQTVVIVGETGCG 82
>FB|FBgn0052533 [details] [associations]
symbol:CG32533 species:7227 "Drosophila melanogaster"
[GO:0004386 "helicase activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:AE014298 GO:GO:0006200 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
OMA:DSDQVFH GeneTree:ENSGT00700000104421 EMBL:AY058623
RefSeq:NP_728244.1 UniGene:Dm.4145 SMR:Q9VWI5
EnsemblMetazoa:FBtr0074786 GeneID:32933 KEGG:dme:Dmel_CG32533
UCSC:CG32533-RA FlyBase:FBgn0052533 InParanoid:Q9VWI5
OrthoDB:EOG4V9S5G GenomeRNAi:32933 NextBio:781096 Uniprot:Q9VWI5
Length = 1139
Score = 234 (87.4 bits), Expect = 3.4e-17, Sum P(2) = 3.4e-17
Identities = 47/116 (40%), Positives = 74/116 (63%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+L+F+ G + I S+ ++ + + + + ++PLHS Q +F+ PEG+RK +++
Sbjct: 375 VLIFVSGVNEIESVVEAVHEYAT-EQTHWLVLPLHSGQAIADQSKVFDYAPEGMRKCIVS 433
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT 304
TNIAETS+T+D + +VVD GK K NFD LK W+S ++A QR+GRAGRT
Sbjct: 434 TNIAETSLTVDGVRFVVDSGKVKEMNFDATCKGQRLKEFWVSKSSADQRKGRAGRT 489
Score = 57 (25.1 bits), Expect = 3.4e-17, Sum P(2) = 3.4e-17
Identities = 8/41 (19%), Positives = 26/41 (63%)
Query: 44 RRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+R +++ + ++ LP + R + + + +++ +++G+TG G
Sbjct: 134 QRIRKLRQTQRNLPIARFRKDLREALDTSRVVIVAGDTGCG 174
>UNIPROTKB|E2RQN1 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 EMBL:AAEX03013926
Ensembl:ENSCAFT00000014378 NextBio:20859776 Uniprot:E2RQN1
Length = 698
Score = 205 (77.2 bits), Expect = 3.9e-17, Sum P(2) = 3.9e-17
Identities = 49/150 (32%), Positives = 81/150 (54%)
Query: 189 ILVFLPGWDTINSLHRSMC-QSSFFNSS----RFQIIPLHSMLPTVSQKSIFNTPPEGVR 243
IL FL G + + ++ + Q+ + +++P+++ LP+ Q +F VR
Sbjct: 269 ILAFLTGQEEVETVVSMLIEQARALGRTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSVR 328
Query: 244 KIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
K+++ATN+AETSITI IVYV+DCG K+ ++ + I L +S A+A QR GRAGR
Sbjct: 329 KVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTTIECLVVAPVSQASANQRAGRAGR 388
Query: 304 TLKRSETQQYPNDVLNMLKD---PELEGVN 330
+ + Y + + L PE++ N
Sbjct: 389 SRSGKCYRLYTEEAFDKLPQCTVPEMQRSN 418
Score = 82 (33.9 bits), Expect = 3.9e-17, Sum P(2) = 3.9e-17
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 51 EARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+ R+KLP +++R+ +L +V N Q VI GETG G
Sbjct: 41 QQRQKLPVFKLRNHILYLVENYQTVVIVGETGCG 74
>UNIPROTKB|E2RQN7 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:AAEX03013926
Ensembl:ENSCAFT00000014371 Uniprot:E2RQN7
Length = 702
Score = 205 (77.2 bits), Expect = 4.0e-17, Sum P(2) = 4.0e-17
Identities = 49/150 (32%), Positives = 81/150 (54%)
Query: 189 ILVFLPGWDTINSLHRSMC-QSSFFNSS----RFQIIPLHSMLPTVSQKSIFNTPPEGVR 243
IL FL G + + ++ + Q+ + +++P+++ LP+ Q +F VR
Sbjct: 277 ILAFLTGQEEVETVVSMLIEQARALGRTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSVR 336
Query: 244 KIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
K+++ATN+AETSITI IVYV+DCG K+ ++ + I L +S A+A QR GRAGR
Sbjct: 337 KVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTTIECLVVAPVSQASANQRAGRAGR 396
Query: 304 TLKRSETQQYPNDVLNMLKD---PELEGVN 330
+ + Y + + L PE++ N
Sbjct: 397 SRSGKCYRLYTEEAFDKLPQCTVPEMQRSN 426
Score = 82 (33.9 bits), Expect = 4.0e-17, Sum P(2) = 4.0e-17
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 51 EARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+ R+KLP +++R+ +L +V N Q VI GETG G
Sbjct: 49 QQRQKLPVFKLRNHILYLVENYQTVVIVGETGCG 82
>UNIPROTKB|F1MNA1 [details] [associations]
symbol:TDRD9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071547 "piP-body" evidence=IEA] [GO:0043046 "DNA
methylation involved in gamete generation" evidence=IEA]
[GO:0034587 "piRNA metabolic process" evidence=IEA] [GO:0009566
"fertilization" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0007140 "male meiosis" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
InterPro:IPR002999 GO:GO:0005524 GO:GO:0005634 GO:GO:0009566
GO:GO:0007283 GO:GO:0003676 GO:GO:0007140 Pfam:PF00567
SMART:SM00333 PROSITE:PS50304 GO:GO:0043046 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0034587
GeneTree:ENSGT00700000104393 GO:GO:0008026 GO:GO:0071547
OMA:INDWFTI EMBL:DAAA02053320 EMBL:DAAA02053321 EMBL:DAAA02053322
EMBL:DAAA02053323 IPI:IPI00699308 Ensembl:ENSBTAT00000027199
Uniprot:F1MNA1
Length = 1392
Score = 228 (85.3 bits), Expect = 4.0e-17, Sum P(2) = 4.0e-17
Identities = 48/118 (40%), Positives = 69/118 (58%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPG IN +H + R Q+ PLHS + Q ++F +P G RKI+L+
Sbjct: 394 VLVFLPGLGEINYMHELLTNMVH---KRLQVYPLHSSVTLEEQNNVFLSPVPGYRKIILS 450
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLK 306
TNIAE+S+T+ D+ YV+D T+ D N +L+ W S + +QR+GRAGR K
Sbjct: 451 TNIAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCEQRKGRAGRVSK 508
Score = 65 (27.9 bits), Expect = 4.0e-17, Sum P(2) = 4.0e-17
Identities = 11/35 (31%), Positives = 21/35 (60%)
Query: 55 KLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHL 89
+LP + ++ V+ ++ +N + +I G TGSG L
Sbjct: 137 ELPISRCKEEVISLIESNSVVIIHGATGSGKSTQL 171
Score = 50 (22.7 bits), Expect = 1.5e-15, Sum P(2) = 1.5e-15
Identities = 30/131 (22%), Positives = 59/131 (45%)
Query: 76 VISG-ETGSGPPLHLDFITLKRSETQ-QYPNDVLNMLKDPELEGVNNDVIFSLLQHICT- 132
+ISG G PPL ++ ET +YP ++ K+ + + ++ + ++ H T
Sbjct: 107 LISGLNPGPRPPLAKSSHVMRIPETAYKYPELPISRCKEEVISLIESNSV--VIIHGATG 164
Query: 133 ----TQRPGAILVYCTYTFMGVSPMKVFFCKNVLQRLMKGVGANSPKRWVKLLRSMLVVP 188
TQ P +L + Y + +C V+ + K +GA+S RW+ R ++
Sbjct: 165 SGKSTQLPQYVLDH--YL------QRSAYCNIVVTQPRK-IGASSIARWISRERGWVLGG 215
Query: 189 ILVFLPGWDTI 199
++ + G + I
Sbjct: 216 LVGYQVGLEKI 226
Score = 40 (19.1 bits), Expect = 1.6e-14, Sum P(2) = 1.6e-14
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 23 LLNDPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPS 58
LL +PV+ A + I +Q +M E+ K PS
Sbjct: 348 LLEEPVITRAVYEVAISLIQMFDDLDMKESGAKTPS 383
>RGD|1302963 [details] [associations]
symbol:Dhx16 "DEAH (Asp-Glu-Ala-His) box polypeptide 16"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1302963 GO:GO:0005524 GO:GO:0003676 EMBL:BX883048
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12813
HOVERGEN:HBG039428 CTD:8449 EMBL:CH474118 IPI:IPI00421973
RefSeq:NP_997661.1 UniGene:Rn.6832 GeneID:294232 KEGG:rno:294232
UCSC:RGD:1302963 NextBio:637799 Genevestigator:Q6MG13
Uniprot:Q6MG13
Length = 1044
Score = 202 (76.2 bits), Expect = 4.1e-17, Sum P(2) = 4.1e-17
Identities = 46/118 (38%), Positives = 70/118 (59%)
Query: 189 ILVFLPGWDTINS---LHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVFL G + I + + + C+ ++P+++ LP+ Q IF P G RK+
Sbjct: 614 ILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKV 673
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
V+ATNIAETS+TI+ I+YV+D G K +++ + + +L S A+A QR GRAGR
Sbjct: 674 VVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGR 731
Score = 90 (36.7 bits), Expect = 4.1e-17, Sum P(2) = 4.1e-17
Identities = 30/115 (26%), Positives = 54/115 (46%)
Query: 42 QSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHLDFITLKRSETQQ 101
Q+++ + + R+ LP + R+ +L + N+Q+ +I GETGSG + + T++
Sbjct: 388 QAQQKESIQAVRRSLPVFPFREELLTAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTKK 447
Query: 102 -------YPNDVLNMLKDPELE---GVN--NDVIFSLLQHICTTQRPGAILVYCT 144
P V M + GV N+V +S+ CT++R +L Y T
Sbjct: 448 GMKIACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSER--TVLRYMT 500
>ASPGD|ASPL0000070923 [details] [associations]
symbol:AN4721 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003723
EMBL:BN001303 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 EMBL:AACD01000080 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
OMA:NAWCYEN OrthoDB:EOG45TGW9 RefSeq:XP_662325.1
ProteinModelPortal:Q5B409 EnsemblFungi:CADANIAT00005708
GeneID:2872518 KEGG:ani:AN4721.2 Uniprot:Q5B409
Length = 1241
Score = 215 (80.7 bits), Expect = 4.4e-17, Sum P(3) = 4.4e-17
Identities = 54/120 (45%), Positives = 75/120 (62%)
Query: 189 ILVFLPGWDTINS----LHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRK 244
+L+FL G + I++ L+ M ++ + I+P++S LP+ Q IF+ P G RK
Sbjct: 788 MLLFLTGQEEIDTACEILYERM-KALGPSVPELVILPVYSALPSEMQSRIFDPAPPGGRK 846
Query: 245 IVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT 304
+V+ATNIAETSITID+I YV+D G K +D K + +L IS A AKQR GRAGRT
Sbjct: 847 VVIATNIAETSITIDNIYYVIDPGFVKQKAYDPKLGMDSLVVTPISQAQAKQRAGRAGRT 906
Score = 83 (34.3 bits), Expect = 4.4e-17, Sum P(3) = 4.4e-17
Identities = 15/41 (36%), Positives = 25/41 (60%)
Query: 44 RRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
R + + R+ LP Y+ R +L+ V NQ+ ++ G+TGSG
Sbjct: 565 RTNMSIKQQRESLPVYKFRQQLLEAVAENQLLIVVGDTGSG 605
Score = 44 (20.5 bits), Expect = 4.2e-13, Sum P(3) = 4.2e-13
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 39 RKLQSRRYQEMLEARKKLPSYQMRD 63
R+ + RY+ +R + P+Y RD
Sbjct: 196 RRRRRDRYRSRSRSRSRSPAYNKRD 220
Score = 37 (18.1 bits), Expect = 4.4e-17, Sum P(3) = 4.4e-17
Identities = 7/17 (41%), Positives = 9/17 (52%)
Query: 427 HPGTTAWGDPNEGNILH 443
HP + +G P E I H
Sbjct: 1148 HPSSAMFGKPAEHVIYH 1164
>MGI|MGI:1921941 [details] [associations]
symbol:Tdrd9 "tudor domain containing 9" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007126 "meiosis" evidence=IEA] [GO:0007140 "male meiosis"
evidence=IMP] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IMP]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0009566 "fertilization" evidence=IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
[GO:0034587 "piRNA metabolic process" evidence=IMP] [GO:0043046
"DNA methylation involved in gamete generation" evidence=IMP]
[GO:0071547 "piP-body" evidence=IDA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
InterPro:IPR002999 MGI:MGI:1921941 GO:GO:0007275 GO:GO:0005524
GO:GO:0005634 GO:GO:0030154 GO:GO:0009566 GO:GO:0007283
GO:GO:0003676 GO:GO:0031047 GO:GO:0007140 Pfam:PF00567
SMART:SM00333 PROSITE:PS50304 GO:GO:0043046 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0034587 eggNOG:COG1643
GeneTree:ENSGT00700000104393 GO:GO:0008026 GO:GO:0071547
EMBL:AC112520 OMA:INDWFTI CTD:122402 OrthoDB:EOG4F4S96
EMBL:AB362563 EMBL:AC132623 EMBL:BC115831 EMBL:BC116656
IPI:IPI00749982 IPI:IPI00849630 IPI:IPI00914159 RefSeq:NP_083332.1
UniGene:Mm.60648 ProteinModelPortal:Q14BI7 SMR:Q14BI7 STRING:Q14BI7
PhosphoSite:Q14BI7 PaxDb:Q14BI7 PRIDE:Q14BI7
Ensembl:ENSMUST00000079009 GeneID:74691 KEGG:mmu:74691
UCSC:uc007pei.1 UCSC:uc007pej.1 UCSC:uc011yva.1
HOGENOM:HOG000047965 HOVERGEN:HBG072266 InParanoid:B1Q3J8
NextBio:341402 Bgee:Q14BI7 Genevestigator:Q14BI7 Uniprot:Q14BI7
Length = 1383
Score = 228 (85.3 bits), Expect = 5.0e-17, Sum P(2) = 5.0e-17
Identities = 50/128 (39%), Positives = 74/128 (57%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPG IN +H + ++ + R Q+ PLHS + Q ++F +P G RKI+L+
Sbjct: 389 VLVFLPGLGEINYMHELL--TNMIHK-RLQVYPLHSSVTLEEQNNVFLSPVPGYRKIILS 445
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TNIAE+S+T+ D+ YV+D T+ D N +L+ W S + QR+GRAGR K
Sbjct: 446 TNIAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCDQRKGRAGRVSKGY 505
Query: 309 ETQQYPND 316
+ P D
Sbjct: 506 CYRLIPRD 513
Score = 64 (27.6 bits), Expect = 5.0e-17, Sum P(2) = 5.0e-17
Identities = 11/34 (32%), Positives = 20/34 (58%)
Query: 56 LPSYQMRDAVLDMVRNNQITVISGETGSGPPLHL 89
LP + ++ V+ ++ +N + +I G TGSG L
Sbjct: 134 LPINRCKEEVISLIESNSVVIIHGATGSGKSTQL 167
Score = 60 (26.2 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 34/145 (23%), Positives = 63/145 (43%)
Query: 60 QMRDAVLDMVRNNQITVISGETGSGPPLHLDFITLKRSETQQYPNDVLNMLKDPELEGVN 119
Q+ + LD+ +Q SG P L + T +YP+ +N K+ + +
Sbjct: 91 QLEEQELDIYGQDQPP--SGPGLRSPLAKLSNVACIPETTYKYPDLPINRCKEEVISLIE 148
Query: 120 NDVIFSLLQHICT-----TQRPGAILVYCTYTFMGVSPMKVFFCKNVLQRLMKGVGANSP 174
++ + ++ H T TQ P +L + YT + FC V+ + K +GA+S
Sbjct: 149 SNSV--VIIHGATGSGKSTQLPQYVLDH--YT------QRSAFCNIVVTQPRK-IGASSI 197
Query: 175 KRWVKLLRSMLVVPILVFLPGWDTI 199
RW+ RS + ++ + G + I
Sbjct: 198 ARWISKERSWTLGGLVGYQVGLEKI 222
>UNIPROTKB|G4NFJ0 [details] [associations]
symbol:MGG_08807 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp22" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:CM001236 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 KO:K12818 RefSeq:XP_003719164.1
ProteinModelPortal:G4NFJ0 EnsemblFungi:MGG_08807T0 GeneID:2678973
KEGG:mgr:MGG_08807 Uniprot:G4NFJ0
Length = 1207
Score = 210 (79.0 bits), Expect = 5.1e-17, Sum P(2) = 5.1e-17
Identities = 54/119 (45%), Positives = 70/119 (58%)
Query: 189 ILVFLPGWDTINSLHRSMCQS-SFFNSS--RFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
IL+FL G + I++ + + S I+P++S LP Q IF+ P G RK+
Sbjct: 753 ILLFLTGQEEIDTSCEILFERMKALGPSVPELIILPVYSALPNEMQSRIFDPAPPGSRKV 812
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT 304
V+ATNIAETSITID I YVVD G K + +D K + +L IS A A QR GRAGRT
Sbjct: 813 VIATNIAETSITIDHIYYVVDPGFVKQNAYDPKLGMDSLVVTPISQAQANQRAGRAGRT 871
Score = 82 (33.9 bits), Expect = 5.1e-17, Sum P(2) = 5.1e-17
Identities = 15/39 (38%), Positives = 24/39 (61%)
Query: 51 EARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHL 89
+ R+ LP + R+ ++ V+ NQI ++ GETGSG L
Sbjct: 537 QQRESLPVFAFREQLIKAVKENQIMIVVGETGSGKTTQL 575
>UNIPROTKB|E1BF68 [details] [associations]
symbol:DHX16 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12813 GeneTree:ENSGT00700000104241 OMA:GTLHREF
CTD:8449 EMBL:DAAA02055402 IPI:IPI00691986 RefSeq:NP_001193139.1
UniGene:Bt.22201 PRIDE:E1BF68 Ensembl:ENSBTAT00000009148
GeneID:506405 KEGG:bta:506405 NextBio:20867594 Uniprot:E1BF68
Length = 1045
Score = 202 (76.2 bits), Expect = 5.2e-17, Sum P(2) = 5.2e-17
Identities = 46/118 (38%), Positives = 70/118 (59%)
Query: 189 ILVFLPGWDTINS---LHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVFL G + I + + + C+ ++P+++ LP+ Q IF P G RK+
Sbjct: 615 ILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKV 674
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
V+ATNIAETS+TI+ I+YV+D G K +++ + + +L S A+A QR GRAGR
Sbjct: 675 VVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGR 732
Score = 89 (36.4 bits), Expect = 5.2e-17, Sum P(2) = 5.2e-17
Identities = 30/115 (26%), Positives = 54/115 (46%)
Query: 42 QSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHLDFITLKRSETQQ 101
Q+++ + + R+ LP + R+ +L + N+Q+ +I GETGSG + + T++
Sbjct: 389 QAQQKESIQAVRRSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTKK 448
Query: 102 -------YPNDVLNMLKDPELE---GVN--NDVIFSLLQHICTTQRPGAILVYCT 144
P V M + GV N+V +S+ CT++R +L Y T
Sbjct: 449 GMKIACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSER--TVLRYMT 501
>POMBASE|SPAC2G11.11c [details] [associations]
symbol:prh1 "ATP-dependent RNA helicase Prh1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005730 "nucleolus" evidence=ISO;IDA] [GO:0042254 "ribosome
biogenesis" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
PomBase:SPAC2G11.11c GO:GO:0005524 EMBL:CU329670 GO:GO:0005730
GenomeReviews:CU329670_GR GO:GO:0006397 GO:GO:0042254 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
KO:K14781 OrthoDB:EOG4F7RTB EMBL:D13249 PIR:S35546 PIR:S62466
RefSeq:NP_593091.1 ProteinModelPortal:Q03319
EnsemblFungi:SPAC2G11.11c.1 GeneID:2541750 KEGG:spo:SPAC2G11.11c
OMA:MANDTTI NextBio:20802841 Uniprot:Q03319
Length = 719
Score = 194 (73.4 bits), Expect = 5.4e-17, Sum P(2) = 5.4e-17
Identities = 50/118 (42%), Positives = 66/118 (55%)
Query: 189 ILVFLPGWDTINSLH---RSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVFL G D I +L +S + N + Q PL + LP Q +F RK+
Sbjct: 307 ILVFLTGQDEIEALEALIKSYSKQLPSNLPQIQACPLFASLPQEQQLQVFLPALANHRKV 366
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
VL+TNIAETS+TI I YV+D G K+ F+ K + +L + IS + A QR GRAGR
Sbjct: 367 VLSTNIAETSVTISGIRYVIDTGLAKIKQFNSKLGLESLTVQPISQSAAMQRSGRAGR 424
Score = 93 (37.8 bits), Expect = 5.4e-17, Sum P(2) = 5.4e-17
Identities = 17/42 (40%), Positives = 30/42 (71%)
Query: 43 SRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
S+R +++LE RK LP ++ D + +++N++ V+ GETGSG
Sbjct: 84 SKR-KDILEQRKNLPIWEAHDTLCQQIQDNRVIVVVGETGSG 124
>TAIR|locus:2007003 [details] [associations]
symbol:FAS4 "FASCIATED STEM 4" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
EMBL:CP002684 GO:GO:0005524 GO:GO:0003676 EMBL:AC051630
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000201240 KO:K14780
IPI:IPI00531863 PIR:E86457 RefSeq:NP_174605.1 UniGene:At.39951
ProteinModelPortal:Q9C813 SMR:Q9C813 STRING:Q9C813 PRIDE:Q9C813
EnsemblPlants:AT1G33390.1 GeneID:840232 KEGG:ath:AT1G33390
TAIR:At1g33390 InParanoid:Q9C813 OMA:EVQWISK PhylomeDB:Q9C813
ProtClustDB:CLSN2693169 Genevestigator:Q9C813 Uniprot:Q9C813
Length = 1237
Score = 218 (81.8 bits), Expect = 5.9e-17, Sum P(2) = 5.9e-17
Identities = 49/132 (37%), Positives = 80/132 (60%)
Query: 212 FNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLATNIAETSITIDDIVYVVDCGKTK 271
F+ + +++PL++ML +Q +F + R +V+ATN+AETS+TI I YVVD G+ K
Sbjct: 642 FSPGKLRVLPLYAMLSPAAQLRVFEEVEKEERLVVVATNVAETSLTIPGIKYVVDTGRVK 701
Query: 272 MSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRSETQQYPNDVL-NMLKD---PELE 327
+ N+D K + + + +WIS A+A QR GRAGRT + Y + V N+ ++ PE+
Sbjct: 702 VKNYDSKTGMESYEVDWISQASASQRAGRAGRTGPGHCYRLYSSAVFSNIFEESSLPEIM 761
Query: 328 GVNNDVIFSLLQ 339
V D + L++
Sbjct: 762 KVPVDGVILLMK 773
Score = 73 (30.8 bits), Expect = 5.9e-17, Sum P(2) = 5.9e-17
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 45 RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
R E+ E RK LP M +++ + + +ISG+TG G
Sbjct: 230 RPAEVEETRKDLPIVMMEQEIMEAINRHPAVIISGQTGCG 269
>UNIPROTKB|O60231 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 EMBL:BA000025 GO:GO:0008380 GO:GO:0006397
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AL845353 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12813 GO:GO:0003724
HOVERGEN:HBG039428 OMA:GTLHREF EMBL:AB001601 EMBL:AB011149
EMBL:BC008825 EMBL:BC009392 IPI:IPI00552073 RefSeq:NP_001157711.1
RefSeq:NP_003578.2 UniGene:Hs.485060 ProteinModelPortal:O60231
SMR:O60231 IntAct:O60231 MINT:MINT-5003862 STRING:O60231
PhosphoSite:O60231 PaxDb:O60231 PRIDE:O60231 DNASU:8449
Ensembl:ENST00000376442 Ensembl:ENST00000383577
Ensembl:ENST00000417308 Ensembl:ENST00000421095
Ensembl:ENST00000424672 Ensembl:ENST00000451456
Ensembl:ENST00000458094 GeneID:8449 KEGG:hsa:8449 UCSC:uc003nqz.3
CTD:8449 GeneCards:GC06M030620 HGNC:HGNC:2739 HPA:HPA051455
MIM:603405 neXtProt:NX_O60231 PharmGKB:PA27205 InParanoid:O60231
OrthoDB:EOG4VHK5Q PhylomeDB:O60231 GenomeRNAi:8449 NextBio:31614
ArrayExpress:O60231 Bgee:O60231 CleanEx:HS_DHX16
Genevestigator:O60231 GermOnline:ENSG00000204560 Uniprot:O60231
Length = 1041
Score = 202 (76.2 bits), Expect = 6.5e-17, Sum P(2) = 6.5e-17
Identities = 46/118 (38%), Positives = 70/118 (59%)
Query: 189 ILVFLPGWDTINS---LHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVFL G + I + + + C+ ++P+++ LP+ Q IF P G RK+
Sbjct: 611 ILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKV 670
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
V+ATNIAETS+TI+ I+YV+D G K +++ + + +L S A+A QR GRAGR
Sbjct: 671 VVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGR 728
Score = 88 (36.0 bits), Expect = 6.5e-17, Sum P(2) = 6.5e-17
Identities = 30/115 (26%), Positives = 53/115 (46%)
Query: 42 QSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHLDFITLKRSETQQ 101
Q+++ + + R+ LP + R+ +L + N+Q+ +I GETGSG + + T +
Sbjct: 385 QAQQKESIQAVRRSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTNK 444
Query: 102 -------YPNDVLNMLKDPELE---GVN--NDVIFSLLQHICTTQRPGAILVYCT 144
P V M + GV N+V +S+ CT++R +L Y T
Sbjct: 445 GMKIACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSER--TVLRYMT 497
>RGD|1306942 [details] [associations]
symbol:Tdrd9 "tudor domain containing 9" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;ISS] [GO:0007140 "male meiosis" evidence=ISO;ISS]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=ISO;ISS] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0009566
"fertilization" evidence=ISO;ISS] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0031047 "gene silencing by RNA"
evidence=IEA] [GO:0034587 "piRNA metabolic process"
evidence=ISO;ISS] [GO:0043046 "DNA methylation involved in gamete
generation" evidence=ISO;ISS] [GO:0071547 "piP-body"
evidence=ISO;ISS] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 InterPro:IPR002999
RGD:1306942 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634 GO:GO:0030154
GO:GO:0009566 GO:GO:0007283 GO:GO:0003676 GO:GO:0031047
GO:GO:0007140 Pfam:PF00567 SMART:SM00333 PROSITE:PS50304
GO:GO:0043046 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0034587 eggNOG:COG1643 GeneTree:ENSGT00700000104393
GO:GO:0008026 GO:GO:0071547 CTD:122402 OrthoDB:EOG4F4S96
HOGENOM:HOG000047965 EMBL:AABR03050289 EMBL:AABR03048647
EMBL:AABR03049552 EMBL:AABR03049859 EMBL:AABR03050293
EMBL:AABR03051941 EMBL:BC104675 IPI:IPI00655293 IPI:IPI00895578
RefSeq:XP_001072421.2 UniGene:Rn.126122 STRING:Q3MHU3 PRIDE:Q3MHU3
Ensembl:ENSRNOT00000017118 GeneID:299343 KEGG:rno:299343
UCSC:RGD:1306942 NextBio:645254 Genevestigator:Q3MHU3
Uniprot:Q3MHU3
Length = 1384
Score = 227 (85.0 bits), Expect = 6.6e-17, Sum P(2) = 6.6e-17
Identities = 48/118 (40%), Positives = 71/118 (60%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPG IN +H + ++ + R Q+ PLHS + Q ++F +P G RKI+L+
Sbjct: 390 VLVFLPGLGEINYMHELL--TNMIHK-RLQVYPLHSSVTLEEQNNVFLSPVPGYRKIILS 446
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLK 306
TNIAE+S+T+ D+ YV+D T+ D N +L+ W S + QR+GRAGR K
Sbjct: 447 TNIAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCDQRKGRAGRVSK 504
Score = 64 (27.6 bits), Expect = 6.6e-17, Sum P(2) = 6.6e-17
Identities = 11/34 (32%), Positives = 20/34 (58%)
Query: 56 LPSYQMRDAVLDMVRNNQITVISGETGSGPPLHL 89
LP + ++ V+ ++ +N + +I G TGSG L
Sbjct: 134 LPINRCKEEVISLIESNSVVIIHGATGSGKSTQL 167
Score = 52 (23.4 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 24/90 (26%), Positives = 43/90 (47%)
Query: 99 TQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICT-----TQRPGAILVYCTYTFMGVSPM 153
T +YP+ +N K+ + + ++ + ++ H T TQ P +L + YT
Sbjct: 128 TYKYPDLPINRCKEEVISLIESNSV--VIIHGATGSGKSTQLPQYVLDH--YT------Q 177
Query: 154 KVFFCKNVLQRLMKGVGANSPKRWVKLLRS 183
+ FC V+ + K +GA+S RW+ RS
Sbjct: 178 RSAFCNIVVTQPRK-IGASSIARWISKERS 206
>UNIPROTKB|F1S9V4 [details] [associations]
symbol:TDRD9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071547 "piP-body" evidence=IEA] [GO:0043046 "DNA
methylation involved in gamete generation" evidence=IEA]
[GO:0034587 "piRNA metabolic process" evidence=IEA] [GO:0009566
"fertilization" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0007140 "male meiosis" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
InterPro:IPR002999 GO:GO:0005524 GO:GO:0005634 GO:GO:0009566
GO:GO:0007283 GO:GO:0003676 GO:GO:0007140 Pfam:PF00567
SMART:SM00333 PROSITE:PS50304 GO:GO:0043046 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0034587
GeneTree:ENSGT00700000104393 GO:GO:0008026 GO:GO:0071547
OMA:INDWFTI EMBL:CU693433 Ensembl:ENSSSCT00000002836
ArrayExpress:F1S9V4 Uniprot:F1S9V4
Length = 1333
Score = 219 (82.2 bits), Expect = 1.0e-16, Sum P(3) = 1.0e-16
Identities = 49/129 (37%), Positives = 71/129 (55%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPG IN +H + R Q+ PLHS + Q ++F +P G RK++L+
Sbjct: 395 VLVFLPGLGEINCMHELLTNMVH---KRLQVYPLHSSVTLEEQNNVFLSPVPGYRKVILS 451
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRR-GRAGRTLKR 307
TNIAE+S+T+ D+ YV+D T+ D N +L+ W S + QR+ GRAGR K
Sbjct: 452 TNIAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCNQRKEGRAGRVSKG 511
Query: 308 SETQQYPND 316
+ P D
Sbjct: 512 YCYRLVPKD 520
Score = 73 (30.8 bits), Expect = 1.0e-16, Sum P(3) = 1.0e-16
Identities = 17/53 (32%), Positives = 28/53 (52%)
Query: 56 LPSYQMRDAVLDMVRNNQITVISGETGSGPPLHLDFITLKRS-ETQQYPNDVL 107
LP + ++ V+ ++ +N + +I G TGSG L L RS + Y N V+
Sbjct: 139 LPINRCKEEVISLIESNSVVIIHGATGSGKSTQLPQYILDRSVQRSTYCNIVV 191
Score = 56 (24.8 bits), Expect = 5.7e-15, Sum P(3) = 5.7e-15
Identities = 29/123 (23%), Positives = 56/123 (45%)
Query: 81 TGSGPPLHL----DFITLKRSETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRP 136
TG GP L L + I L + T +YP+ +N K+ + + ++ + ++ H T
Sbjct: 112 TGPGPRLPLAKLSNVICLPET-TYKYPDLPINRCKEEVISLIESNSV--VIIHGATGSGK 168
Query: 137 GAILVYCTYTFMGVSPMKVFFCKNVLQRLMKGVGANSPKRWVKLLRSMLVVPILVFLPGW 196
L Y + S + +C V+ + K +GA+S RW+ R+ + ++ + G
Sbjct: 169 STQLPQ--Y-ILDRSVQRSTYCNIVVTQPRK-IGASSIARWISKERAWTLGGLVGYQVGL 224
Query: 197 DTI 199
+ I
Sbjct: 225 EKI 227
Score = 40 (19.1 bits), Expect = 1.0e-16, Sum P(3) = 1.0e-16
Identities = 10/40 (25%), Positives = 19/40 (47%)
Query: 390 EIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKL-SHP 428
E++ V + A+++K+L A + L L +HP
Sbjct: 914 EVVEVGHFWGYRIDEKNAEVLKQLSAEISRLKLVPLPTHP 953
>FB|FBgn0003483 [details] [associations]
symbol:spn-E "spindle E" species:7227 "Drosophila
melanogaster" [GO:0007315 "pole plasm assembly" evidence=NAS]
[GO:0030720 "oocyte localization involved in germarium-derived egg
chamber formation" evidence=IMP] [GO:0030717 "karyosome formation"
evidence=IMP] [GO:0009951 "polarity specification of dorsal/ventral
axis" evidence=IMP] [GO:0048477 "oogenesis" evidence=IGI;TAS]
[GO:0009949 "polarity specification of anterior/posterior axis"
evidence=IMP] [GO:0007294 "germarium-derived oocyte fate
determination" evidence=IGI] [GO:0008298 "intracellular mRNA
localization" evidence=IMP;TAS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0008186 "RNA-dependent ATPase
activity" evidence=TAS] [GO:0006403 "RNA localization"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA;NAS] [GO:0003724
"RNA helicase activity" evidence=TAS] [GO:0004386 "helicase
activity" evidence=ISS] [GO:0009994 "oocyte differentiation"
evidence=NAS] [GO:0001556 "oocyte maturation" evidence=IMP]
[GO:0030423 "targeting of mRNA for destruction involved in RNA
interference" evidence=IMP] [GO:0045451 "pole plasm oskar mRNA
localization" evidence=IMP] [GO:0006342 "chromatin silencing"
evidence=IMP] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0007317 "regulation of pole plasm oskar
mRNA localization" evidence=IMP] [GO:0016246 "RNA interference"
evidence=TAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0046843
"dorsal appendage formation" evidence=IMP] [GO:0010529 "negative
regulation of transposition" evidence=IMP] [GO:0043186 "P granule"
evidence=IDA] [GO:0060213 "positive regulation of
nuclear-transcribed mRNA poly(A) tail shortening" evidence=IMP]
[GO:0007076 "mitotic chromosome condensation" evidence=IMP]
InterPro:IPR001650 InterPro:IPR007087 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00355 SMART:SM00490
SMART:SM00847 InterPro:IPR002999 EMBL:AE014297 GO:GO:0005524
GO:GO:0005634 GO:GO:0007126 GO:GO:0009949 GO:GO:0007294
GO:GO:0008270 GO:GO:0007283 GO:GO:0003676 GO:GO:0006342
GO:GO:0030423 Pfam:PF00567 SMART:SM00333 PROSITE:PS50304
GO:GO:0007076 GO:GO:0001556 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0046843 GO:GO:0030720 GO:GO:0030717
eggNOG:COG1643 GeneTree:ENSGT00700000104393 GO:GO:0060213
GO:GO:0008026 GO:GO:0045451 GO:GO:0003724 GO:GO:0043186
GO:GO:0007317 GO:GO:0008186 GO:GO:0009951 EMBL:S79915 EMBL:BT029921
EMBL:BT100306 PIR:T13889 RefSeq:NP_476741.1 UniGene:Dm.21664
ProteinModelPortal:Q9VF26 SMR:Q9VF26 STRING:Q9VF26 PaxDb:Q9VF26
PRIDE:Q9VF26 EnsemblMetazoa:FBtr0083183 GeneID:41919
KEGG:dme:Dmel_CG3158 UCSC:CG3158-RA CTD:41919 FlyBase:FBgn0003483
InParanoid:Q9VF26 OMA:INDWFTI OrthoDB:EOG4V6WXM PhylomeDB:Q9VF26
GenomeRNAi:41919 NextBio:826268 Bgee:Q9VF26 Uniprot:Q9VF26
Length = 1434
Score = 220 (82.5 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 48/138 (34%), Positives = 77/138 (55%)
Query: 189 ILVFLPGWDTINSLHRSM-CQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVL 247
+L+FLPG I+++ ++ C + + I+ S++ +Q+ +FN PP G RKI+L
Sbjct: 368 VLIFLPGIYEIDTMAENLTCMLENDPNIKVSIVRCFSLMTPENQRDVFNPPPPGFRKIIL 427
Query: 248 ATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKR 307
TNIAE+SIT+ D+ YV+D K+ D + ++L+ W S AN +QR GR GR L+
Sbjct: 428 TTNIAESSITVPDVSYVIDFCLAKVKVTDTASSFSSLRLTWASKANCRQRAGRVGR-LRS 486
Query: 308 SETQQYPNDVLNMLKDPE 325
+ N + PE
Sbjct: 487 GRVYRMVNKHFYQREMPE 504
Score = 70 (29.7 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 33/139 (23%), Positives = 63/139 (45%)
Query: 20 RQKLLNDPVLDAAFKKEMIRKLQS--RRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVI 77
R + L+D D ++ IR+ ++++ L K L Y R+ +L + + + +I
Sbjct: 77 RIRTLDDLDTDDEGEETEIRRDDEYYKKFRFNLNRDKNLSIYAKREEILAAINAHPVVII 136
Query: 78 SGETGSGPPLHL-DFITLKRSETQQYPNDVLNMLKDPELEGVNNDVIFSL--LQH-ICTT 133
GETG G + +I + ++ +Y N V+ + + N V Q+ +C+
Sbjct: 137 KGETGCGKTTQVPQYILDEAYKSGKYCNIVVTQPRRIAAISIANRVCQEREWQQNTVCSF 196
Query: 134 Q----RPGAI----LVYCT 144
Q RP ++ L+YCT
Sbjct: 197 QVGLHRPNSLEDTRLLYCT 215
>CGD|CAL0002409 [details] [associations]
symbol:orf19.5865 species:5476 "Candida albicans" [GO:0071006
"U2-type catalytic step 1 spliceosome" evidence=IEA] [GO:0000349
"generation of catalytic spliceosome for first transesterification
step" evidence=IEA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
CGD:CAL0002409 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AACQ01000003 EMBL:AACQ01000004
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K12814 RefSeq:XP_722935.1 RefSeq:XP_723081.1 GeneID:3635187
GeneID:3635307 KEGG:cal:CaO19.13287 KEGG:cal:CaO19.5865
Uniprot:Q5ANN5
Length = 865
Score = 199 (75.1 bits), Expect = 1.1e-16, Sum P(3) = 1.1e-16
Identities = 61/159 (38%), Positives = 84/159 (52%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQ---IIPLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVFL G D I ++ + S + + +++ LP Q+ IF P RKI
Sbjct: 445 ILVFLTGQDEIETMEEILRDSILKLGDQIDPMIVCSIYANLPQELQQKIFQPTPSNTRKI 504
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT- 304
VLATNIAETSITID I YV+D G K + ++ + +L S A+A QR GRAGR
Sbjct: 505 VLATNIAETSITIDGISYVIDPGYVKQNVYNPTTGMESLVVVPCSRASADQRAGRAGRVG 564
Query: 305 ---LKRSETQ-QYPNDVLNMLKDPELEGVN-NDVIFSLL 338
R T+ + N+ L+ + PE++ VN VI LL
Sbjct: 565 PGKCFRLFTKWSFYNE-LDSNQQPEIQRVNLTSVILLLL 602
Score = 88 (36.0 bits), Expect = 1.1e-16, Sum P(3) = 1.1e-16
Identities = 17/39 (43%), Positives = 22/39 (56%)
Query: 51 EARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHL 89
E RK LP Y R+ L ++ NQ ++ GETGSG L
Sbjct: 224 EVRKSLPVYSYREEFLKIINENQTLIVVGETGSGKTTQL 262
Score = 40 (19.1 bits), Expect = 1.1e-16, Sum P(3) = 1.1e-16
Identities = 12/38 (31%), Positives = 18/38 (47%)
Query: 107 LNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVYCT 144
++ K PE + I ++ Q T PG ILV+ T
Sbjct: 414 IHYTKQPEANYIQA-AITTIFQIHMTQPLPGDILVFLT 450
>WB|WBGene00003389 [details] [associations]
symbol:mog-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0042127 "regulation of cell proliferation"
evidence=IMP] [GO:0040020 "regulation of meiosis" evidence=IMP]
[GO:0007281 "germ cell development" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0006898 GO:GO:0002119
GO:GO:0008380 GO:GO:0006397 GO:GO:0010171 GO:GO:0003676
GO:GO:0042127 GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0040022 GO:GO:0008026 HOGENOM:HOG000175261
EMBL:Z29560 KO:K12815 EMBL:AF120269 PIR:F88570 PIR:S41025
RefSeq:NP_499212.1 UniGene:Cel.5743 ProteinModelPortal:P34498
SMR:P34498 IntAct:P34498 STRING:P34498 PaxDb:P34498 PRIDE:P34498
EnsemblMetazoa:K03H1.2 GeneID:176409 KEGG:cel:CELE_K03H1.2
UCSC:K03H1.2.1 CTD:176409 WormBase:K03H1.2
GeneTree:ENSGT00700000104877 InParanoid:P34498 OMA:PSRSTWE
NextBio:892452 Uniprot:P34498
Length = 1131
Score = 209 (78.6 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 54/159 (33%), Positives = 86/159 (54%)
Query: 189 ILVFLPGWDTINSLHRSMCQS--SFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIV 246
IL+F+PG + I + + + ++P++S LP+ Q IF P G+RK +
Sbjct: 653 ILIFMPGQEDIECTCEMIKEKLGELDEAPPLAVLPIYSQLPSDLQAKIFQRAPGGMRKAI 712
Query: 247 LATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT-- 304
+ATNIAETS+T+D I++V+D G KM ++ + + L +S A+A QR GRAGRT
Sbjct: 713 VATNIAETSLTVDGILFVIDPGFCKMKVYNPRIGMDALSIFPVSQASANQRTGRAGRTGP 772
Query: 305 --LKRSETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHI 341
R T++ D L PE++ N + LL+ +
Sbjct: 773 GQCYRLYTERQFKDELLKSTVPEIQRTNLANVVLLLKSL 811
Score = 79 (32.9 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 14/39 (35%), Positives = 24/39 (61%)
Query: 51 EARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHL 89
+ R+ LP + R +++++R N + +I GETGSG L
Sbjct: 436 QQREYLPVFACRQKMMNVIRENNVVIIVGETGSGKTTQL 474
>UNIPROTKB|P34498 [details] [associations]
symbol:mog-1 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-1" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0009792 GO:GO:0006898
GO:GO:0002119 GO:GO:0008380 GO:GO:0006397 GO:GO:0010171
GO:GO:0003676 GO:GO:0042127 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0040022 GO:GO:0008026
HOGENOM:HOG000175261 EMBL:Z29560 KO:K12815 EMBL:AF120269 PIR:F88570
PIR:S41025 RefSeq:NP_499212.1 UniGene:Cel.5743
ProteinModelPortal:P34498 SMR:P34498 IntAct:P34498 STRING:P34498
PaxDb:P34498 PRIDE:P34498 EnsemblMetazoa:K03H1.2 GeneID:176409
KEGG:cel:CELE_K03H1.2 UCSC:K03H1.2.1 CTD:176409 WormBase:K03H1.2
GeneTree:ENSGT00700000104877 InParanoid:P34498 OMA:PSRSTWE
NextBio:892452 Uniprot:P34498
Length = 1131
Score = 209 (78.6 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 54/159 (33%), Positives = 86/159 (54%)
Query: 189 ILVFLPGWDTINSLHRSMCQS--SFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIV 246
IL+F+PG + I + + + ++P++S LP+ Q IF P G+RK +
Sbjct: 653 ILIFMPGQEDIECTCEMIKEKLGELDEAPPLAVLPIYSQLPSDLQAKIFQRAPGGMRKAI 712
Query: 247 LATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT-- 304
+ATNIAETS+T+D I++V+D G KM ++ + + L +S A+A QR GRAGRT
Sbjct: 713 VATNIAETSLTVDGILFVIDPGFCKMKVYNPRIGMDALSIFPVSQASANQRTGRAGRTGP 772
Query: 305 --LKRSETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHI 341
R T++ D L PE++ N + LL+ +
Sbjct: 773 GQCYRLYTERQFKDELLKSTVPEIQRTNLANVVLLLKSL 811
Score = 79 (32.9 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 14/39 (35%), Positives = 24/39 (61%)
Query: 51 EARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHL 89
+ R+ LP + R +++++R N + +I GETGSG L
Sbjct: 436 QQREYLPVFACRQKMMNVIRENNVVIIVGETGSGKTTQL 474
>UNIPROTKB|Q8NDG6 [details] [associations]
symbol:TDRD9 "Putative ATP-dependent RNA helicase TDRD9"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0031047 "gene silencing by
RNA" evidence=IEA] [GO:0005634 "nucleus" evidence=ISS] [GO:0034587
"piRNA metabolic process" evidence=ISS] [GO:0007283
"spermatogenesis" evidence=ISS] [GO:0071547 "piP-body"
evidence=ISS] [GO:0043046 "DNA methylation involved in gamete
generation" evidence=ISS] [GO:0009566 "fertilization" evidence=ISS]
[GO:0007140 "male meiosis" evidence=ISS] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
InterPro:IPR002999 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0030154 GO:GO:0009566 GO:GO:0007283 GO:GO:0003676
GO:GO:0031047 GO:GO:0007140 Pfam:PF00567 SMART:SM00333
PROSITE:PS50304 GO:GO:0043046 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0034587 eggNOG:COG1643 GO:GO:0008026
GO:GO:0071547 EMBL:AL136001 OMA:INDWFTI EMBL:AL132712 EMBL:AL833915
EMBL:AK093483 EMBL:AK097429 EMBL:AK097699 EMBL:AK125978
EMBL:BC016796 EMBL:BC128057 IPI:IPI00384419 IPI:IPI00413613
PIR:G02632 RefSeq:NP_694591.2 UniGene:Hs.21454
ProteinModelPortal:Q8NDG6 SMR:Q8NDG6 STRING:Q8NDG6
PhosphoSite:Q8NDG6 DMDM:290457664 PaxDb:Q8NDG6 PRIDE:Q8NDG6
Ensembl:ENST00000339063 Ensembl:ENST00000409874 GeneID:122402
KEGG:hsa:122402 UCSC:uc001yom.4 UCSC:uc001yon.4 CTD:122402
GeneCards:GC14P104394 HGNC:HGNC:20122 HPA:HPA038120
neXtProt:NX_Q8NDG6 PharmGKB:PA134890186 InParanoid:Q8NDG6
OrthoDB:EOG4F4S96 GenomeRNAi:122402 NextBio:80877 Bgee:Q8NDG6
CleanEx:HS_TDRD9 Genevestigator:Q8NDG6 Uniprot:Q8NDG6
Length = 1382
Score = 227 (85.0 bits), Expect = 1.2e-16, Sum P(3) = 1.2e-16
Identities = 48/115 (41%), Positives = 70/115 (60%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPG IN +H + +S + R Q+ PLHS + Q ++F +P G RKI+L+
Sbjct: 388 VLVFLPGLGEINYMHELL--TSLVHK-RLQVYPLHSSVALEEQNNVFLSPVPGYRKIILS 444
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAE+S+T+ D+ YV+D T+ D N +L+ W S + QR+GRAGR
Sbjct: 445 TNIAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCNQRKGRAGR 499
Score = 63 (27.2 bits), Expect = 1.2e-16, Sum P(3) = 1.2e-16
Identities = 11/34 (32%), Positives = 20/34 (58%)
Query: 56 LPSYQMRDAVLDMVRNNQITVISGETGSGPPLHL 89
LP + ++ V+ ++ +N + +I G TGSG L
Sbjct: 132 LPISRYKEEVVSLIESNSVVIIHGATGSGKSTQL 165
Score = 56 (24.8 bits), Expect = 6.2e-16, Sum P(3) = 6.2e-16
Identities = 36/146 (24%), Positives = 66/146 (45%)
Query: 60 QMRDAVLDMVRNNQITVISGETGSGPPL-HLDFITLKRSETQQYPNDVLNMLKDPELEGV 118
Q+ LD+ R+ Q T SG G P L L +T T +YP+ ++ K+ + +
Sbjct: 89 QLEAQELDVCRSVQPT--SGP-GPRPSLAKLSSVTCIPGTTYKYPDLPISRYKEEVVSLI 145
Query: 119 NNDVIFSLLQHICT-----TQRPGAILVYCTYTFMGVSPMKVFFCKNVLQRLMKGVGANS 173
++ + ++ H T TQ P IL + Y + +C V+ + K +GA+S
Sbjct: 146 ESNSV--VIIHGATGSGKSTQLPQYILDH--YV------QRSAYCSIVVTQPRK-IGASS 194
Query: 174 PKRWVKLLRSMLVVPILVFLPGWDTI 199
RW+ R+ + ++ + G + I
Sbjct: 195 IARWISKERAWTLGGVVGYQVGLEKI 220
Score = 41 (19.5 bits), Expect = 1.2e-16, Sum P(3) = 1.2e-16
Identities = 10/40 (25%), Positives = 21/40 (52%)
Query: 390 EIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKL-SHP 428
E++ V + + ++I+K+L A ++ L L +HP
Sbjct: 906 EVVEVGHFWGYRIDENNSEILKKLTAEINQLTLVPLPTHP 945
>TAIR|locus:2010549 [details] [associations]
symbol:AT1G27900 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007126 "meiosis" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0010332 "response to gamma
radiation" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0032204 "regulation of telomere
maintenance" evidence=RCA] [GO:0033044 "regulation of chromosome
organization" evidence=RCA] [GO:0042138 "meiotic DNA double-strand
break formation" evidence=RCA] [GO:0043247 "telomere maintenance in
response to DNA damage" evidence=RCA] [GO:0045132 "meiotic
chromosome segregation" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12818 EMBL:AY054692
EMBL:AY128718 IPI:IPI00545738 RefSeq:NP_564296.1 UniGene:At.25438
ProteinModelPortal:Q93Y16 SMR:Q93Y16 PaxDb:Q93Y16 PRIDE:Q93Y16
EnsemblPlants:AT1G27900.1 GeneID:839683 KEGG:ath:AT1G27900
TAIR:At1g27900 InParanoid:Q93Y16 OMA:NCRRFIV PhylomeDB:Q93Y16
ProtClustDB:CLSN2688039 ArrayExpress:Q93Y16 Genevestigator:Q93Y16
Uniprot:Q93Y16
Length = 700
Score = 208 (78.3 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 50/133 (37%), Positives = 71/133 (53%)
Query: 189 ILVFLPGWDTINSLH-------RSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEG 241
IL+F+ G D I L RS+ + S ++ I PLH LP Q +F+ PP
Sbjct: 216 ILIFMTGQDDIEKLVSRLEEKVRSLAEGSCMDAI---IYPLHGSLPPEMQVRVFSPPPPN 272
Query: 242 VRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRA 301
R+ +++TNIAETS+T+D +VYV+D G K ++ + +L IS A QR GRA
Sbjct: 273 CRRFIVSTNIAETSLTVDGVVYVIDSGYVKQRQYNPSSGMFSLDVIQISKVQANQRAGRA 332
Query: 302 GRTLKRSETQQYP 314
GRT + YP
Sbjct: 333 GRTRPGKCYRLYP 345
Score = 74 (31.1 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 16/45 (35%), Positives = 23/45 (51%)
Query: 56 LPSYQMRDAVLDMVRNNQITVISGETGSGPPLHLDFITLKRSETQ 100
LP Q + +++ V N + VI GETGSG L I + T+
Sbjct: 4 LPILQFEEKIVETVEKNSVVVIIGETGSGKSTQLSQILHRHGYTK 48
>UNIPROTKB|E1BDN4 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 KO:K13117 OMA:NIFVVPP CTD:60625
EMBL:DAAA02036576 EMBL:DAAA02036577 EMBL:DAAA02036578
IPI:IPI00707123 RefSeq:NP_001179272.1 UniGene:Bt.52291
Ensembl:ENSBTAT00000005281 GeneID:513148 KEGG:bta:513148
NextBio:20870723 Uniprot:E1BDN4
Length = 703
Score = 201 (75.8 bits), Expect = 1.4e-16, Sum P(2) = 1.4e-16
Identities = 49/150 (32%), Positives = 80/150 (53%)
Query: 189 ILVFLPGWDTINSLHRSMC-QSSFFNSS----RFQIIPLHSMLPTVSQKSIFNTPPEGVR 243
IL FL G + + ++ + Q+ + +I+P+++ LP+ Q +F VR
Sbjct: 277 ILAFLTGQEEVETVVSMLIEQARALGQTGMKRHLRILPMYAGLPSFEQMKVFERVSRSVR 336
Query: 244 KIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
K+++ATN+AETSITI IVYV+DCG K+ ++ + I L +S A+A QR GR GR
Sbjct: 337 KVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRGGR 396
Query: 304 TLKRSETQQYPNDVLNMLKD---PELEGVN 330
+ + Y + + L PE++ N
Sbjct: 397 SRSGKCYRLYTEEAFDQLPQSTVPEMQRSN 426
Score = 81 (33.6 bits), Expect = 1.4e-16, Sum P(2) = 1.4e-16
Identities = 15/34 (44%), Positives = 24/34 (70%)
Query: 51 EARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+ R+KLP +++R+ +L ++ N Q VI GETG G
Sbjct: 49 QQRQKLPVFKLRNHILYLIENYQTVVIIGETGCG 82
>UNIPROTKB|F1PGL2 [details] [associations]
symbol:DHX16 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12813
GeneTree:ENSGT00700000104241 OMA:GTLHREF CTD:8449 EMBL:AAEX03008197
RefSeq:XP_538827.2 Ensembl:ENSCAFT00000000685 GeneID:481706
KEGG:cfa:481706 Uniprot:F1PGL2
Length = 1042
Score = 202 (76.2 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
Identities = 46/118 (38%), Positives = 70/118 (59%)
Query: 189 ILVFLPGWDTINS---LHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVFL G + I + + + C+ ++P+++ LP+ Q IF P G RK+
Sbjct: 612 ILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKV 671
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
V+ATNIAETS+TI+ I+YV+D G K +++ + + +L S A+A QR GRAGR
Sbjct: 672 VVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGR 729
Score = 84 (34.6 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
Identities = 29/115 (25%), Positives = 54/115 (46%)
Query: 42 QSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHLDFITLKRSETQQ 101
Q+++ + + R+ LP + R+ +L + ++Q+ +I GETGSG + + T++
Sbjct: 386 QAQQKESVQAVRRSLPVFPFREELLAAIADHQVLIIEGETGSGKTTQIPQYLFEEGYTKK 445
Query: 102 -------YPNDVLNMLKDPELE---GVN--NDVIFSLLQHICTTQRPGAILVYCT 144
P V M + GV N+V +S+ CT++R +L Y T
Sbjct: 446 GMKIACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSER--TVLRYMT 498
>UNIPROTKB|E1BYA5 [details] [associations]
symbol:DHX33 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000182 "rDNA binding"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0033613 "activating transcription
factor binding" evidence=IEA] [GO:0045943 "positive regulation of
transcription from RNA polymerase I promoter" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005654 GO:GO:0005730 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AADN02025994
IPI:IPI00823199 Ensembl:ENSGALT00000002492 ArrayExpress:E1BYA5
Uniprot:E1BYA5
Length = 660
Score = 207 (77.9 bits), Expect = 2.1e-16, Sum P(2) = 2.1e-16
Identities = 57/171 (33%), Positives = 88/171 (51%)
Query: 189 ILVFLPGWDTINSLH---RSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVFL G + I ++ R + + + ++PL++ LP Q +F P+G RK+
Sbjct: 241 ILVFLTGQEEIEAMTKTCRDIAKHLPDGCPQMTVMPLYASLPYSQQLRVFQAAPKGCRKV 300
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTL 305
+L+TNIAETSITI I YVVD G K ++ + + L + +S A A QR GRAGR
Sbjct: 301 ILSTNIAETSITISGIKYVVDTGMVKAKKYNPEIGLEVLAVQRVSKAQAWQRTGRAGRED 360
Query: 306 KRSETQQYPNDVL---NMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVF 353
+ Y D + + PE++ + + S+L + + P IL F
Sbjct: 361 SGICYRLYTEDEFEKFDKMTVPEIQSLCRCNLASVLLQLLALRIPN-ILTF 410
Score = 72 (30.4 bits), Expect = 2.1e-16, Sum P(2) = 2.1e-16
Identities = 14/32 (43%), Positives = 21/32 (65%)
Query: 53 RKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
R++LP +Q R +L +R + V+ GETGSG
Sbjct: 21 RRELPIFQARGPLLSQLRGLECAVLIGETGSG 52
Score = 37 (18.1 bits), Expect = 9.1e-13, Sum P(2) = 9.1e-13
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 14 VTSWETRQKLLNDPVL-DAAFKKEMIRK 40
+TS ETR K L D +L A ++RK
Sbjct: 110 LTSDETRIKFLTDGMLLREAIGDPILRK 137
>UNIPROTKB|F1NWS9 [details] [associations]
symbol:TDRD9 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007140 "male meiosis" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0009566 "fertilization"
evidence=IEA] [GO:0034587 "piRNA metabolic process" evidence=IEA]
[GO:0043046 "DNA methylation involved in gamete generation"
evidence=IEA] [GO:0071547 "piP-body" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 InterPro:IPR002999
GO:GO:0005524 GO:GO:0005634 GO:GO:0009566 GO:GO:0003676
GO:GO:0004386 GO:GO:0007140 Pfam:PF00567 SMART:SM00333
PROSITE:PS50304 InterPro:IPR014001 PROSITE:PS51192 GO:GO:0034587
GeneTree:ENSGT00700000104393 GO:GO:0071547 OMA:INDWFTI
EMBL:AADN02003787 IPI:IPI00574259 Ensembl:ENSGALT00000018863
Uniprot:F1NWS9
Length = 1180
Score = 236 (88.1 bits), Expect = 2.5e-16, P = 2.5e-16
Identities = 49/115 (42%), Positives = 72/115 (62%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPG+ I+ +H C + FN ++Q+ PLHS + Q ++F P G RK++L+
Sbjct: 194 VLVFLPGFCEISYMHS--CLTRMFNK-KWQVYPLHSRVSLEEQNNVFLNPVPGYRKVILS 250
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAE+S+T+ D+ YV+D T+ D + N +L+ W S N QRRGRAGR
Sbjct: 251 TNIAESSVTVPDVKYVIDFCLTRTLFCDEETNYQSLRLCWASKTNCYQRRGRAGR 305
>RGD|1311165 [details] [associations]
symbol:Dhx35 "DEAH (Asp-Glu-Ala-His) box polypeptide 35"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA;ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 RGD:1311165 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104241 KO:K13117
OMA:NIFVVPP CTD:60625 EMBL:CH474005 IPI:IPI00764730
RefSeq:NP_001102071.1 UniGene:Rn.118078 Ensembl:ENSRNOT00000021435
GeneID:362260 KEGG:rno:362260 UCSC:RGD:1311165 NextBio:679233
Uniprot:D4AEG5
Length = 679
Score = 197 (74.4 bits), Expect = 2.8e-16, Sum P(2) = 2.8e-16
Identities = 48/152 (31%), Positives = 79/152 (51%)
Query: 189 ILVFLPGWDTINSL-------HRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEG 241
IL FL G + + ++ R++ ++ +++P+++ LP+ Q +F
Sbjct: 277 ILAFLTGQEEVETVVSMLIEQARALARTGM--KKHLRVLPMYAGLPSFEQMKVFERVSHS 334
Query: 242 VRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRA 301
VRK+++ATN+AETSITI IVYV+DCG K+ ++ + I L +S A+A QR GR
Sbjct: 335 VRKVIVATNVAETSITISGIVYVIDCGFMKLRAYNPRTAIECLVVVPVSQASANQRAGRG 394
Query: 302 GRTLKRSETQQYPNDVLNMLKD---PELEGVN 330
GR + Y + L PE++ N
Sbjct: 395 GRNRSGKCYRLYTEEAFEQLPQSTVPEMQRSN 426
Score = 82 (33.9 bits), Expect = 2.8e-16, Sum P(2) = 2.8e-16
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 51 EARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+ R+KLP +++R+ +L +V N Q VI GETG G
Sbjct: 49 QQRQKLPVFKLRNHILYLVENYQTVVIVGETGCG 82
>UNIPROTKB|C3XYZ4 [details] [associations]
symbol:BRAFLDRAFT_65715 "Putative uncharacterized protein"
species:7739 "Branchiostoma floridae" [GO:0005634 "nucleus"
evidence=ISS] [GO:0007140 "male meiosis" evidence=ISS] [GO:0007283
"spermatogenesis" evidence=ISS] [GO:0009566 "fertilization"
evidence=ISS] [GO:0034587 "piRNA metabolic process" evidence=ISS]
[GO:0043046 "DNA methylation involved in gamete generation"
evidence=ISS] [GO:0071547 "piP-body" evidence=ISS]
InterPro:IPR001650 InterPro:IPR007087 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00028 PROSITE:PS51194 SMART:SM00355
SMART:SM00490 SMART:SM00847 InterPro:IPR002999 GO:GO:0005524
GO:GO:0005634 GO:GO:0008270 GO:GO:0009566 GO:GO:0007283
GO:GO:0003676 GO:GO:0007140 Pfam:PF00567 GO:GO:0043046
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0034587
GO:GO:0008026 GO:GO:0071547 OMA:INDWFTI EMBL:GG666475
RefSeq:XP_002610548.1 GeneID:7220579 KEGG:bfo:BRAFLDRAFT_65715
eggNOG:NOG270748 Uniprot:C3XYZ4
Length = 1475
Score = 221 (82.9 bits), Expect = 2.9e-16, Sum P(2) = 2.9e-16
Identities = 48/115 (41%), Positives = 68/115 (59%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPG IN+L + + + ++PLHS + + Q +F P RK++L+
Sbjct: 394 VLVFLPGLAEINTLDELLAHET--TRYKLWVLPLHSTITSEEQAQVFVPPRPHQRKVILS 451
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAE+SIT+ DI YV+D TK D + N +L+ W S AN QR+GRAGR
Sbjct: 452 TNIAESSITVPDIKYVIDFCLTKCMVCDPETNYQSLQLNWASQANCTQRKGRAGR 506
Score = 65 (27.9 bits), Expect = 2.9e-16, Sum P(2) = 2.9e-16
Identities = 12/29 (41%), Positives = 19/29 (65%)
Query: 56 LPSYQMRDAVLDMVRNNQITVISGETGSG 84
LP ++ ++ V +N +TVI G+TGSG
Sbjct: 142 LPITGYQEEIITTVESNSVTVIQGDTGSG 170
>UNIPROTKB|D3ZZG1 [details] [associations]
symbol:Dhx35 "Protein Dhx35" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1311165 GO:GO:0005524 GO:GO:0003676 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 IPI:IPI00951610
Ensembl:ENSRNOT00000068625 OrthoDB:EOG4V9TQ5 ArrayExpress:D3ZZG1
Uniprot:D3ZZG1
Length = 703
Score = 197 (74.4 bits), Expect = 3.2e-16, Sum P(2) = 3.2e-16
Identities = 48/152 (31%), Positives = 79/152 (51%)
Query: 189 ILVFLPGWDTINSL-------HRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEG 241
IL FL G + + ++ R++ ++ +++P+++ LP+ Q +F
Sbjct: 277 ILAFLTGQEEVETVVSMLIEQARALARTGM--KKHLRVLPMYAGLPSFEQMKVFERVSHS 334
Query: 242 VRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRA 301
VRK+++ATN+AETSITI IVYV+DCG K+ ++ + I L +S A+A QR GR
Sbjct: 335 VRKVIVATNVAETSITISGIVYVIDCGFMKLRAYNPRTAIECLVVVPVSQASANQRAGRG 394
Query: 302 GRTLKRSETQQYPNDVLNMLKD---PELEGVN 330
GR + Y + L PE++ N
Sbjct: 395 GRNRSGKCYRLYTEEAFEQLPQSTVPEMQRSN 426
Score = 82 (33.9 bits), Expect = 3.2e-16, Sum P(2) = 3.2e-16
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 51 EARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+ R+KLP +++R+ +L +V N Q VI GETG G
Sbjct: 49 QQRQKLPVFKLRNHILYLVENYQTVVIVGETGCG 82
>UNIPROTKB|Q5THR1 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
EMBL:AL023803 UniGene:Hs.444520 HGNC:HGNC:15861 IPI:IPI00642913
SMR:Q5THR1 Ensembl:ENST00000373325 Uniprot:Q5THR1
Length = 679
Score = 197 (74.4 bits), Expect = 3.6e-16, Sum P(2) = 3.6e-16
Identities = 47/152 (30%), Positives = 81/152 (53%)
Query: 189 ILVFLPGWDTINSL-------HRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEG 241
+L FL G + + ++ R++ ++ +++P+++ LP+ Q +F
Sbjct: 277 VLAFLTGQEEVETVVSMLIEQARALARTGM--KRHLRVLPMYAGLPSFEQMKVFERVSRS 334
Query: 242 VRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRA 301
VRK+++ATN+AETSITI IVYV+DCG K+ ++ + I L +S A+A QR GR
Sbjct: 335 VRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRG 394
Query: 302 GRTLKRSETQQYPNDVLNMLKD---PELEGVN 330
GR+ + Y + + L PE++ N
Sbjct: 395 GRSRSGKCYRLYTEEAFDKLPQSTVPEMQRSN 426
Score = 81 (33.6 bits), Expect = 3.6e-16, Sum P(2) = 3.6e-16
Identities = 15/34 (44%), Positives = 24/34 (70%)
Query: 51 EARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+ R+KLP +++R+ +L ++ N Q VI GETG G
Sbjct: 49 QQRQKLPVFKLRNHILYLIENYQTVVIVGETGCG 82
>UNIPROTKB|Q9H5Z1 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CH471077 GO:GO:0003676 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HOVERGEN:HBG039428 KO:K13117 OMA:NIFVVPP
EMBL:AK026412 EMBL:AK025541 EMBL:AL023803 EMBL:BC132669
IPI:IPI00030288 RefSeq:NP_068750.2 UniGene:Hs.444520
ProteinModelPortal:Q9H5Z1 SMR:Q9H5Z1 IntAct:Q9H5Z1
PhosphoSite:Q9H5Z1 DMDM:20137971 PRIDE:Q9H5Z1 DNASU:60625
Ensembl:ENST00000252011 GeneID:60625 KEGG:hsa:60625 UCSC:uc002xjh.3
CTD:60625 GeneCards:GC20P037590 HGNC:HGNC:15861 neXtProt:NX_Q9H5Z1
PharmGKB:PA27222 InParanoid:Q9H5Z1 PhylomeDB:Q9H5Z1
GenomeRNAi:60625 NextBio:65461 ArrayExpress:Q9H5Z1 Bgee:Q9H5Z1
CleanEx:HS_DHX35 Genevestigator:Q9H5Z1 GermOnline:ENSG00000101452
Uniprot:Q9H5Z1
Length = 703
Score = 197 (74.4 bits), Expect = 4.0e-16, Sum P(2) = 4.0e-16
Identities = 47/152 (30%), Positives = 81/152 (53%)
Query: 189 ILVFLPGWDTINSL-------HRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEG 241
+L FL G + + ++ R++ ++ +++P+++ LP+ Q +F
Sbjct: 277 VLAFLTGQEEVETVVSMLIEQARALARTGM--KRHLRVLPMYAGLPSFEQMKVFERVSRS 334
Query: 242 VRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRA 301
VRK+++ATN+AETSITI IVYV+DCG K+ ++ + I L +S A+A QR GR
Sbjct: 335 VRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRG 394
Query: 302 GRTLKRSETQQYPNDVLNMLKD---PELEGVN 330
GR+ + Y + + L PE++ N
Sbjct: 395 GRSRSGKCYRLYTEEAFDKLPQSTVPEMQRSN 426
Score = 81 (33.6 bits), Expect = 4.0e-16, Sum P(2) = 4.0e-16
Identities = 15/34 (44%), Positives = 24/34 (70%)
Query: 51 EARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+ R+KLP +++R+ +L ++ N Q VI GETG G
Sbjct: 49 QQRQKLPVFKLRNHILYLIENYQTVVIVGETGCG 82
>UNIPROTKB|G4NHA6 [details] [associations]
symbol:MGG_03893 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp43" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:CM001236 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12820 RefSeq:XP_003719983.1
EnsemblFungi:MGG_03893T0 GeneID:2677480 KEGG:mgr:MGG_03893
Uniprot:G4NHA6
Length = 779
Score = 184 (69.8 bits), Expect = 4.4e-16, Sum P(2) = 4.4e-16
Identities = 43/94 (45%), Positives = 59/94 (62%)
Query: 218 QIIPLHSMLPTVSQKSIFNTPPEGV-------RKIVLATNIAETSITIDDIVYVVDCGKT 270
++ PL+ LP Q+ IFN P + RK ++ATNIAETS+TID IVYVVD G +
Sbjct: 354 EVYPLYGTLPPQQQQKIFNAAPPPLKKGGRPGRKCIVATNIAETSLTIDGIVYVVDPGFS 413
Query: 271 KMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT 304
K ++ + + +L IS A+A+QR GRAGRT
Sbjct: 414 KQKIYNARIRVESLLVTPISRASAQQRAGRAGRT 447
Score = 96 (38.9 bits), Expect = 4.4e-16, Sum P(2) = 4.4e-16
Identities = 27/77 (35%), Positives = 39/77 (50%)
Query: 8 KGLTHSVTSWETRQKLLNDPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLD 67
KGLT T+ + +KL + A S++Y ++L+ R+ LP +Q R LD
Sbjct: 65 KGLTRHETTAKQAEKL------EDADTNAFTGGSHSQQYFKILKTRRNLPVHQHRQEFLD 118
Query: 68 MVRNNQITVISGETGSG 84
+ QI V GETGSG
Sbjct: 119 VYHKTQIMVFVGETGSG 135
>ASPGD|ASPL0000052850 [details] [associations]
symbol:AN1363 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:BN001308 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K13117
EMBL:AACD01000018 OrthoDB:EOG4BGD47 RefSeq:XP_658967.1
EnsemblFungi:CADANIAT00001248 GeneID:2877144 KEGG:ani:AN1363.2
OMA:VAEEMRC Uniprot:Q5BDL7
Length = 670
Score = 217 (81.4 bits), Expect = 4.6e-16, Sum P(2) = 4.6e-16
Identities = 57/148 (38%), Positives = 81/148 (54%)
Query: 189 ILVFLPGWDTINSLHRSMCQ--SSFFNSSRFQI-IPLHSMLPTVSQKSIFNTPPEGVRKI 245
IL+FL G + I + + + + ++ S+ + +PL++ L T Q +F PE RK+
Sbjct: 249 ILIFLTGREEIETAIQLISERATTLHPKSQSLLPLPLYAGLTTDQQMYVFEPAPENTRKV 308
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTL 305
V++TNIAE S+TI+ IVYVVDCG K+ +D I TL IS A A QR GRAGRT
Sbjct: 309 VVSTNIAEASVTINGIVYVVDCGFAKLRAYDPSTGIETLTAVPISKAAAVQRAGRAGRTK 368
Query: 306 KRSETQQYPNDVLNMLKD---PELEGVN 330
+ Y L D PE++ N
Sbjct: 369 PGKCFRLYTQHAYEQLPDATIPEIQRSN 396
Score = 58 (25.5 bits), Expect = 4.6e-16, Sum P(2) = 4.6e-16
Identities = 11/34 (32%), Positives = 20/34 (58%)
Query: 56 LPSYQMRDAVLDMVRNNQITVISGETGSGPPLHL 89
LP + + ++L +V +T++ G+TGSG L
Sbjct: 22 LPIARHKQSILYLVETYPVTIVVGQTGSGKTTQL 55
>UNIPROTKB|G4MKC3 [details] [associations]
symbol:MGG_02518 "ATP-dependent RNA helicase DHX8"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:CM001231 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K13117 RefSeq:XP_003709326.1 EnsemblFungi:MGG_02518T0
GeneID:2681615 KEGG:mgr:MGG_02518 Uniprot:G4MKC3
Length = 671
Score = 206 (77.6 bits), Expect = 4.6e-16, Sum P(2) = 4.6e-16
Identities = 58/148 (39%), Positives = 78/148 (52%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQ---IIPLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVFL G D I + ++ + + +S+ + +PL S L T Q IF P RK+
Sbjct: 249 ILVFLTGRDEIEAAVDAVSERTAHLTSQDRGLLPLPLFSGLSTEQQMYIFEEAPANTRKV 308
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTL 305
+ +TNIAE S+TI IVYVVD G K+ ++ K I TL IS A A QR GRAGRT
Sbjct: 309 IFSTNIAEASVTISGIVYVVDSGFVKLRAYNPKTGIETLTAVPISKAAAAQRAGRAGRTK 368
Query: 306 KRSETQQYPNDVLNMLKD---PELEGVN 330
+ Y + L D PE++ N
Sbjct: 369 PGKCFRLYTEESYTSLSDTNIPEVQRSN 396
Score = 70 (29.7 bits), Expect = 4.6e-16, Sum P(2) = 4.6e-16
Identities = 13/29 (44%), Positives = 22/29 (75%)
Query: 56 LPSYQMRDAVLDMVRNNQITVISGETGSG 84
LP + +D++L +V +N +TV+ G+TGSG
Sbjct: 21 LPIARHKDSLLYVVESNPVTVVVGQTGSG 49
Score = 41 (19.5 bits), Expect = 4.8e-13, Sum P(2) = 4.8e-13
Identities = 18/61 (29%), Positives = 30/61 (49%)
Query: 14 VTSWETRQKLLNDPVLDAAFKKEMIRKLQSRRYQEML-EARKKLPSYQMRDAVLDMVRNN 72
VTS TR K L D +L ++ ++ L SR M+ EA ++ S + +L +R
Sbjct: 108 VTSEATRIKFLTDGLL---IREALVDPLLSRYSIVMVDEAHERSVSTDILLGLLKKIRKK 164
Query: 73 Q 73
+
Sbjct: 165 R 165
>WB|WBGene00018967 [details] [associations]
symbol:F56D2.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0016246 "RNA interference" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0042127
"regulation of cell proliferation" evidence=IMP] [GO:0040020
"regulation of meiosis" evidence=IMP] [GO:0040022 "feminization of
hermaphroditic germ-line" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0016246
GO:GO:0008380 GO:GO:0006397 GO:GO:0040011 GO:GO:0003676
GO:GO:0042127 GO:GO:0040035 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0040022 HOGENOM:HOG000175261 EMBL:FO080358
KO:K12820 PIR:T16482 RefSeq:NP_741147.1 ProteinModelPortal:Q20875
SMR:Q20875 STRING:Q20875 PaxDb:Q20875 PRIDE:Q20875
EnsemblMetazoa:F56D2.6a.1 EnsemblMetazoa:F56D2.6a.2 GeneID:175771
KEGG:cel:CELE_F56D2.6 UCSC:F56D2.6a CTD:175771 WormBase:F56D2.6a
GeneTree:ENSGT00650000093246 InParanoid:Q20875 OMA:TVLQIHA
NextBio:889592 ArrayExpress:Q20875 Uniprot:Q20875
Length = 739
Score = 184 (69.8 bits), Expect = 4.8e-16, Sum P(2) = 4.8e-16
Identities = 50/125 (40%), Positives = 73/125 (58%)
Query: 189 ILVFLPGWDTINSLHRSM---CQSSFFNSSRFQIIPLHSMLPTVSQKSIFN-TPPE---G 241
IL+FL G + I + + Q+ ++ IPL+S LP +Q+ IF PP G
Sbjct: 296 ILLFLTGQEEIEEACKRIDREIQALGADAGALSCIPLYSTLPPAAQQRIFEPAPPNRPNG 355
Query: 242 V--RKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRG 299
RK V++TNIAETS+TID +V+V+D G +K ++ + + +L IS A+A QR G
Sbjct: 356 AISRKCVISTNIAETSLTIDGVVFVIDPGFSKQKVYNPRIRVESLLVCPISKASAMQRAG 415
Query: 300 RAGRT 304
RAGRT
Sbjct: 416 RAGRT 420
Score = 95 (38.5 bits), Expect = 4.8e-16, Sum P(2) = 4.8e-16
Identities = 17/42 (40%), Positives = 28/42 (66%)
Query: 43 SRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
S RY + E R +LP ++ ++ ++++RNNQ + GETGSG
Sbjct: 63 SNRYWAIWEKRSQLPVWEYKEKFMELLRNNQCITLVGETGSG 104
>UNIPROTKB|Q20875 [details] [associations]
symbol:F56D2.6 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase F56D2.6" species:6239 "Caenorhabditis
elegans" [GO:0030686 "90S preribosome" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] [GO:0006364 "rRNA processing"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0016246
GO:GO:0008380 GO:GO:0006397 GO:GO:0040011 GO:GO:0003676
GO:GO:0042127 GO:GO:0040035 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0040022 HOGENOM:HOG000175261 EMBL:FO080358
KO:K12820 PIR:T16482 RefSeq:NP_741147.1 ProteinModelPortal:Q20875
SMR:Q20875 STRING:Q20875 PaxDb:Q20875 PRIDE:Q20875
EnsemblMetazoa:F56D2.6a.1 EnsemblMetazoa:F56D2.6a.2 GeneID:175771
KEGG:cel:CELE_F56D2.6 UCSC:F56D2.6a CTD:175771 WormBase:F56D2.6a
GeneTree:ENSGT00650000093246 InParanoid:Q20875 OMA:TVLQIHA
NextBio:889592 ArrayExpress:Q20875 Uniprot:Q20875
Length = 739
Score = 184 (69.8 bits), Expect = 4.8e-16, Sum P(2) = 4.8e-16
Identities = 50/125 (40%), Positives = 73/125 (58%)
Query: 189 ILVFLPGWDTINSLHRSM---CQSSFFNSSRFQIIPLHSMLPTVSQKSIFN-TPPE---G 241
IL+FL G + I + + Q+ ++ IPL+S LP +Q+ IF PP G
Sbjct: 296 ILLFLTGQEEIEEACKRIDREIQALGADAGALSCIPLYSTLPPAAQQRIFEPAPPNRPNG 355
Query: 242 V--RKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRG 299
RK V++TNIAETS+TID +V+V+D G +K ++ + + +L IS A+A QR G
Sbjct: 356 AISRKCVISTNIAETSLTIDGVVFVIDPGFSKQKVYNPRIRVESLLVCPISKASAMQRAG 415
Query: 300 RAGRT 304
RAGRT
Sbjct: 416 RAGRT 420
Score = 95 (38.5 bits), Expect = 4.8e-16, Sum P(2) = 4.8e-16
Identities = 17/42 (40%), Positives = 28/42 (66%)
Query: 43 SRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
S RY + E R +LP ++ ++ ++++RNNQ + GETGSG
Sbjct: 63 SNRYWAIWEKRSQLPVWEYKEKFMELLRNNQCITLVGETGSG 104
>ZFIN|ZDB-GENE-080507-1 [details] [associations]
symbol:dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide
40" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-080507-1 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104421
EMBL:CR848791 EMBL:CU861501 IPI:IPI00507978
Ensembl:ENSDART00000101707 Uniprot:E7F7R7
Length = 734
Score = 192 (72.6 bits), Expect = 5.1e-16, Sum P(2) = 5.1e-16
Identities = 42/86 (48%), Positives = 56/86 (65%)
Query: 219 IIPLHSMLPTVSQKSIFNTPPEGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVK 278
I+ L+ +PT Q+ IF P+GVRK V+ATNIA TS+TID I Y+VD G K N + +
Sbjct: 280 ILSLYGSMPTDQQRQIFQPAPKGVRKCVVATNIAATSLTIDGIRYIVDSGFVKQLNHNSR 339
Query: 279 DNIATLKPEWISLANAKQRRGRAGRT 304
+ L+ IS + A+QR GRAGRT
Sbjct: 340 VGLDILEVVPISKSEAQQRAGRAGRT 365
Score = 86 (35.3 bits), Expect = 5.1e-16, Sum P(2) = 5.1e-16
Identities = 16/36 (44%), Positives = 22/36 (61%)
Query: 54 KKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHL 89
KKLP YQ +D ++ V N +++GETGSG L
Sbjct: 16 KKLPIYQYKDKLVQAVEENTFLIVTGETGSGKTTQL 51
Score = 45 (20.9 bits), Expect = 9.2e-12, Sum P(2) = 9.2e-12
Identities = 23/109 (21%), Positives = 41/109 (37%)
Query: 18 ETRQKLLNDPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVI 77
E ++ LN VL KK +++ SR + L+ + + + + N + I
Sbjct: 139 EAHERSLNTDVLLGLLKKTLLKG--SRGNKTPLKVVVMSATLET-EKLSSFYGNCPVFTI 195
Query: 78 SGETGSGPPLHLDFITLKRSETQQYPNDVLNMLKDPELEGVNNDVIFSL 126
G T + I K E+ Y +V+ M D D++ L
Sbjct: 196 PGRTYPVKETFCNLIGPKDKESSVYVKEVVKMTLDVHTNEAAGDILVFL 244
>MGI|MGI:2445102 [details] [associations]
symbol:Dhx33 "DEAH (Asp-Glu-Ala-His) box polypeptide 33"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000182 "rDNA binding" evidence=ISO;IDA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=ISO;IDA] [GO:0005730 "nucleolus"
evidence=ISO;IDA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IPI]
[GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=ISO;IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:2445102
GO:GO:0005524 GO:GO:0005654 GO:GO:0005730 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 GO:GO:0000182
GO:GO:0045943 HOVERGEN:HBG039428 GeneTree:ENSGT00700000104241
CTD:56919 OMA:APDYFRR ChiTaRS:DHX33 EMBL:AK035177 EMBL:BC052172
IPI:IPI00410764 RefSeq:NP_848144.3 UniGene:Mm.35399
ProteinModelPortal:Q80VY9 SMR:Q80VY9 PhosphoSite:Q80VY9
PRIDE:Q80VY9 Ensembl:ENSMUST00000108527 GeneID:216877
KEGG:mmu:216877 InParanoid:Q80VY9 NextBio:375442 Bgee:Q80VY9
CleanEx:MM_DHX33 Genevestigator:Q80VY9
GermOnline:ENSMUSG00000040620 Uniprot:Q80VY9
Length = 698
Score = 198 (74.8 bits), Expect = 6.3e-16, Sum P(2) = 6.3e-16
Identities = 54/157 (34%), Positives = 78/157 (49%)
Query: 189 ILVFLPGWDTINSLH---RSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVFL G + I ++ R + + ++PL++ LP Q +F P+G RK+
Sbjct: 282 ILVFLTGQEEIEAMSKTCRDIARHLPDGCPSMLVLPLYASLPYSQQLRVFQGAPKGYRKV 341
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTL 305
+++TNIAETSITI I YVVD G K ++ + L + +S A QR GRAGR
Sbjct: 342 IISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRTGRAGRED 401
Query: 306 KRSETQQYPNDVLNMLKD---PELEGVN-NDVIFSLL 338
+ Y D + PE++ N VI LL
Sbjct: 402 SGICYRLYTEDEFEKFEKMTVPEIQRCNLASVILQLL 438
Score = 78 (32.5 bits), Expect = 6.3e-16, Sum P(2) = 6.3e-16
Identities = 18/40 (45%), Positives = 25/40 (62%)
Query: 46 YQEMLEA-RKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
Y+E LE R+ LP ++ R +L +RN V+ GETGSG
Sbjct: 54 YREALELQRRSLPIFRARGQLLAQLRNLDNAVLIGETGSG 93
Score = 42 (19.8 bits), Expect = 3.4e-12, Sum P(2) = 3.4e-12
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 14 VTSWETRQKLLNDPVL-DAAFKKEMIRK 40
VTS +TR K L D +L A ++RK
Sbjct: 151 VTSEDTRIKFLTDGMLLREAISDSLLRK 178
>UNIPROTKB|F1MWZ4 [details] [associations]
symbol:F1MWZ4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=IEA] [GO:0033613 "activating
transcription factor binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0000182
"rDNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005654 GO:GO:0005730
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:DAAA02048722
IPI:IPI00693412 Ensembl:ENSBTAT00000016932 Uniprot:F1MWZ4
Length = 714
Score = 198 (74.8 bits), Expect = 6.7e-16, Sum P(2) = 6.7e-16
Identities = 53/157 (33%), Positives = 78/157 (49%)
Query: 189 ILVFLPGWDTINSLH---RSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVFL G + I ++ R + + ++PL++ LP Q +F P+G RK+
Sbjct: 298 ILVFLTGQEEIEAMSKTCRDIAKHLPDGCPSMLVLPLYASLPYAQQLRVFQRAPKGYRKV 357
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTL 305
+++TNIAETSITI I YVVD G K ++ + L + +S A QR GRAGR
Sbjct: 358 IISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRTGRAGRED 417
Query: 306 KRSETQQYPNDVLNMLKD---PELEGVN-NDVIFSLL 338
+ Y D + PE++ N V+ LL
Sbjct: 418 SGICYRLYTEDEFEKFEKMTVPEIQRCNLASVMLQLL 454
Score = 78 (32.5 bits), Expect = 6.7e-16, Sum P(2) = 6.7e-16
Identities = 18/40 (45%), Positives = 24/40 (60%)
Query: 46 YQEMLEA-RKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
Y E +E R+ LP +Q R +L +RN V+ GETGSG
Sbjct: 70 YPEAVEQQRRNLPIFQARGQLLAQLRNLDSAVLIGETGSG 109
>ZFIN|ZDB-GENE-090313-193 [details] [associations]
symbol:tdrd9 "tudor domain containing 9"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0043046 "DNA methylation
involved in gamete generation" evidence=ISS] [GO:0071547 "piP-body"
evidence=ISS] [GO:0007140 "male meiosis" evidence=ISS] [GO:0009566
"fertilization" evidence=ISS] [GO:0007283 "spermatogenesis"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=IEA;ISS]
[GO:0034587 "piRNA metabolic process" evidence=ISS] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0007126 "meiosis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0031047 "gene silencing by RNA" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 InterPro:IPR002999 ZFIN:ZDB-GENE-090313-193
GO:GO:0005524 GO:GO:0003676 Pfam:PF00567 SMART:SM00333
PROSITE:PS50304 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 GO:GO:0008026 EMBL:BX072537
IPI:IPI00488074 Ensembl:ENSDART00000124958 Bgee:F1RA66
Uniprot:F1RA66
Length = 1344
Score = 214 (80.4 bits), Expect = 8.6e-16, Sum P(2) = 8.6e-16
Identities = 53/143 (37%), Positives = 76/143 (53%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPG I + ++ S R Q+ PLHS + Q +F P G RKI+L+
Sbjct: 349 VLVFLPGLAEIQYMKEAL---SKLVRKRLQVYPLHSTVTLEEQNGVFLVPVPGYRKIILS 405
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLK-- 306
TNIAE+S+T+ D+ YV+D + D + N L+ W S + QRRGRAGR K
Sbjct: 406 TNIAESSVTVPDVKYVIDFCLVRQLACDKETNYRCLRITWASKTSCNQRRGRAGRVSKGF 465
Query: 307 --RSETQQY-PNDVLNMLKDPEL 326
R T+ + N++ N PE+
Sbjct: 466 CYRLVTRHFWENEIPNF-SIPEM 487
Score = 67 (28.6 bits), Expect = 8.6e-16, Sum P(2) = 8.6e-16
Identities = 18/77 (23%), Positives = 33/77 (42%)
Query: 56 LPSYQMRDAVLDMVRNNQITVISGETGSGPPLHLDFITLKRSETQQYPNDVLNMLKDPEL 115
LP + R ++ ++ NN + +I G TGSG L L + P +++ + P
Sbjct: 89 LPITKNRQELVSLIENNSVVIIRGATGSGKTTQLPQFILDHYAERNIPCNLV--VTQPRK 146
Query: 116 EGVNNDVIFSLLQHICT 132
G + + + CT
Sbjct: 147 IGATSIARWVARERKCT 163
>FB|FBgn0032194 [details] [associations]
symbol:CG4901 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0000390 "spliceosomal complex disassembly" evidence=ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0004386
"helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014134 GO:GO:0022008 GO:GO:0006200 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AY113491
RefSeq:NP_609356.2 UniGene:Dm.10854 SMR:Q9VL25 MINT:MINT-898830
STRING:Q9VL25 EnsemblMetazoa:FBtr0079947 GeneID:34357
KEGG:dme:Dmel_CG4901 UCSC:CG4901-RA FlyBase:FBgn0032194
InParanoid:Q9VL25 OrthoDB:EOG4MW6N5 GenomeRNAi:34357 NextBio:788096
Uniprot:Q9VL25
Length = 694
Score = 205 (77.2 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 56/157 (35%), Positives = 80/157 (50%)
Query: 189 ILVFLPGWDTINSLH---RSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
+L+FL G + I SL R + + ++ ++ L++ L Q F P VRK+
Sbjct: 284 VLIFLTGQEEIESLAQQIRQLAKIDTTGTTDLRVFTLYAQLSQGKQLECFVPTPANVRKV 343
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTL 305
+LATNIAETSITI I V+DCG K +F+ D + LK IS A A QR GRAGR
Sbjct: 344 ILATNIAETSITIPGIRCVIDCGFVKEKSFNTVDGLDVLKSVRISKAQAWQRAGRAGRDA 403
Query: 306 KRSETQQYPNDVLNMLKD---PELEGVN-NDVIFSLL 338
+ + Y ++ D PE+ N ++ LL
Sbjct: 404 DGTCYRAYTKAEMDSFADATQPEILRTNPTSMVLQLL 440
Score = 68 (29.0 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 20/78 (25%), Positives = 36/78 (46%)
Query: 23 LLNDPVLD-----AAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVI 77
+ N P+L+ A K+ + L + + + + +K LP + R +L + N +I
Sbjct: 30 MANSPILEKKPHVAQIKQTIAPILLTSKRTSIEQQQKSLPVFNCRHRILKELEANDTVLI 89
Query: 78 SGETGSGPPLHL-DFITL 94
ETGSG + F+ L
Sbjct: 90 MSETGSGKTTQIPQFLLL 107
>GENEDB_PFALCIPARUM|MAL13P1.322 [details] [associations]
symbol:MAL13P1.322 "splicing factor,
putative" species:5833 "Plasmodium falciparum" [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
EMBL:AL844509 HOGENOM:HOG000175261 KO:K12815 RefSeq:XP_002809102.1
ProteinModelPortal:C0H5K5 EnsemblProtists:MAL13P1.322:mRNA
GeneID:813888 KEGG:pfa:MAL13P1.322 EuPathDB:PlasmoDB:PF3D7_1364300
OMA:YFHNAAK ProtClustDB:CLSZ2500787 Uniprot:C0H5K5
Length = 1151
Score = 179 (68.1 bits), Expect = 1.1e-15, Sum P(3) = 1.1e-15
Identities = 52/153 (33%), Positives = 82/153 (53%)
Query: 217 FQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFD 276
F I P++S L + Q IF +RKI+++TNIAETS+T+D I YV+D G K+ ++
Sbjct: 772 FYIFPIYSQLSSEQQSKIFKK--YDLRKIIVSTNIAETSLTLDGIKYVIDTGYCKLKVYN 829
Query: 277 VKDNIATLKPEWISLANAKQRRGRAGRTLKRSETQQYPNDVL--NMLKD--PELEGVNND 332
+ L+ IS ANA QR GRAGRT + Y + ++ ++ PE++ N
Sbjct: 830 QTIGMDVLQVTPISQANANQRSGRAGRTGAGICYRLYTENTFLCDLYQNNIPEIQRSNLS 889
Query: 333 VIFSLLQHICTTQRPGAILVFLPGWDTI-NSLH 364
+ LL+ + + +P ++I NSLH
Sbjct: 890 NVVLLLKSLHVQNLFEFDFIDVPSKESIINSLH 922
Score = 96 (38.9 bits), Expect = 1.1e-15, Sum P(3) = 1.1e-15
Identities = 18/38 (47%), Positives = 27/38 (71%)
Query: 47 QEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+E+L+ ++ LP Y+ + +LD V NN I +I GETGSG
Sbjct: 470 EELLKLKESLPIYKSKHELLDAVYNNNIIIIVGETGSG 507
Score = 49 (22.3 bits), Expect = 1.1e-15, Sum P(3) = 1.1e-15
Identities = 17/65 (26%), Positives = 29/65 (44%)
Query: 93 TLKRSETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVYCTYTFMGVSP 152
TL E +Y V+ M + E +N DV+ +L++IC + ++V T +
Sbjct: 584 TLNDKELDKY--SVIIMDEAHE-RSINTDVLLGILKNICLKRNDLKLIV--TSATIDAKK 638
Query: 153 MKVFF 157
FF
Sbjct: 639 FSAFF 643
>UNIPROTKB|C0H5K5 [details] [associations]
symbol:MAL13P1.322 "Splicing factor, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
EMBL:AL844509 HOGENOM:HOG000175261 KO:K12815 RefSeq:XP_002809102.1
ProteinModelPortal:C0H5K5 EnsemblProtists:MAL13P1.322:mRNA
GeneID:813888 KEGG:pfa:MAL13P1.322 EuPathDB:PlasmoDB:PF3D7_1364300
OMA:YFHNAAK ProtClustDB:CLSZ2500787 Uniprot:C0H5K5
Length = 1151
Score = 179 (68.1 bits), Expect = 1.1e-15, Sum P(3) = 1.1e-15
Identities = 52/153 (33%), Positives = 82/153 (53%)
Query: 217 FQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFD 276
F I P++S L + Q IF +RKI+++TNIAETS+T+D I YV+D G K+ ++
Sbjct: 772 FYIFPIYSQLSSEQQSKIFKK--YDLRKIIVSTNIAETSLTLDGIKYVIDTGYCKLKVYN 829
Query: 277 VKDNIATLKPEWISLANAKQRRGRAGRTLKRSETQQYPNDVL--NMLKD--PELEGVNND 332
+ L+ IS ANA QR GRAGRT + Y + ++ ++ PE++ N
Sbjct: 830 QTIGMDVLQVTPISQANANQRSGRAGRTGAGICYRLYTENTFLCDLYQNNIPEIQRSNLS 889
Query: 333 VIFSLLQHICTTQRPGAILVFLPGWDTI-NSLH 364
+ LL+ + + +P ++I NSLH
Sbjct: 890 NVVLLLKSLHVQNLFEFDFIDVPSKESIINSLH 922
Score = 96 (38.9 bits), Expect = 1.1e-15, Sum P(3) = 1.1e-15
Identities = 18/38 (47%), Positives = 27/38 (71%)
Query: 47 QEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+E+L+ ++ LP Y+ + +LD V NN I +I GETGSG
Sbjct: 470 EELLKLKESLPIYKSKHELLDAVYNNNIIIIVGETGSG 507
Score = 49 (22.3 bits), Expect = 1.1e-15, Sum P(3) = 1.1e-15
Identities = 17/65 (26%), Positives = 29/65 (44%)
Query: 93 TLKRSETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVYCTYTFMGVSP 152
TL E +Y V+ M + E +N DV+ +L++IC + ++V T +
Sbjct: 584 TLNDKELDKY--SVIIMDEAHE-RSINTDVLLGILKNICLKRNDLKLIV--TSATIDAKK 638
Query: 153 MKVFF 157
FF
Sbjct: 639 FSAFF 643
>UNIPROTKB|J3KR71 [details] [associations]
symbol:DHX34 "Probable ATP-dependent RNA helicase DHX34"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AC008754 HGNC:HGNC:16719
ChiTaRS:DHX34 ProteinModelPortal:J3KR71 Ensembl:ENST00000466298
Uniprot:J3KR71
Length = 576
Score = 205 (77.2 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 45/95 (47%), Positives = 63/95 (66%)
Query: 210 SFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLATNIAETSITIDDIVYVVDCGK 269
S F SS F P+ + + ++F+ P GVRK +L+TNIAETS+TID I +VVD GK
Sbjct: 317 SLF-SSYFSNAPVVQVPGRLFPITVFDVAPPGVRKCILSTNIAETSVTIDGIRFVVDSGK 375
Query: 270 TKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT 304
K ++D + + L+ WIS A+A+QR+GRAGRT
Sbjct: 376 VKEMSYDPQAKLQRLQEFWISQASAEQRKGRAGRT 410
Score = 65 (27.9 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 12/40 (30%), Positives = 23/40 (57%)
Query: 45 RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
R ++ R LP Q + +L ++ +Q+ V++G+TG G
Sbjct: 151 RLAKLQRERAALPIAQYGNRILQTLKEHQVVVVAGDTGCG 190
>UNIPROTKB|Q9H6R0 [details] [associations]
symbol:DHX33 "Putative ATP-dependent RNA helicase DHX33"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IEA]
[GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=IDA] [GO:0000182
"rDNA binding" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:CH471108 GO:GO:0005654
GO:GO:0005730 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0000182 GO:GO:0045943 HOVERGEN:HBG039428
EMBL:AK025625 EMBL:AK026944 EMBL:AK295074 EMBL:AC004148
EMBL:BC030017 EMBL:CR936655 IPI:IPI00302860 IPI:IPI00655950
RefSeq:NP_001186628.1 RefSeq:NP_064547.2 UniGene:Hs.250456
ProteinModelPortal:Q9H6R0 SMR:Q9H6R0 IntAct:Q9H6R0
PhosphoSite:Q9H6R0 DMDM:296434478 PRIDE:Q9H6R0
Ensembl:ENST00000225296 GeneID:56919 KEGG:hsa:56919 UCSC:uc002gbz.3
CTD:56919 GeneCards:GC17M005360 HGNC:HGNC:16718 MIM:614405
neXtProt:NX_Q9H6R0 PharmGKB:PA27220 InParanoid:Q9H6R0 OMA:APDYFRR
OrthoDB:EOG46Q6S1 PhylomeDB:Q9H6R0 ChiTaRS:DHX33 GenomeRNAi:56919
NextBio:62420 ArrayExpress:Q9H6R0 Bgee:Q9H6R0 CleanEx:HS_DHX33
Genevestigator:Q9H6R0 GermOnline:ENSG00000005100 Uniprot:Q9H6R0
Length = 707
Score = 196 (74.1 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 45/118 (38%), Positives = 65/118 (55%)
Query: 189 ILVFLPGWDTINSLH---RSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVFL G + I ++ R + + ++PL++ LP Q +F P+G RK+
Sbjct: 291 ILVFLTGQEEIEAMSKTCRDIAKHLPDGCPAMLVLPLYASLPYAQQLRVFQGAPKGYRKV 350
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
+++TNIAETSITI I YVVD G K ++ + L + +S A QR GRAGR
Sbjct: 351 IISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRTGRAGR 408
Score = 77 (32.2 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 18/40 (45%), Positives = 24/40 (60%)
Query: 46 YQEMLEA-RKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
Y E +E R+ LP +Q R +L +RN V+ GETGSG
Sbjct: 63 YPEAVELQRRSLPIFQARGQLLAQLRNLDNAVLIGETGSG 102
Score = 42 (19.8 bits), Expect = 6.0e-12, Sum P(2) = 6.0e-12
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 14 VTSWETRQKLLNDPVL-DAAFKKEMIRK 40
VTS +TR K L D +L A ++RK
Sbjct: 160 VTSEDTRIKFLTDGMLLREAISDSLLRK 187
>UNIPROTKB|E1C4U5 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0071013 "catalytic step
2 spliceosome" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:AADN02019394
IPI:IPI00591771 Ensembl:ENSGALT00000005796 Uniprot:E1C4U5
Length = 705
Score = 196 (74.1 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 44/120 (36%), Positives = 69/120 (57%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNS-----SRFQIIPLHSMLPTVSQKSIFNTPPEGVR 243
IL FL G + + ++ + + + S +++P+++ LP+ Q +F VR
Sbjct: 277 ILAFLTGQEEVETVVSMLIEQARALSRTGMRKHLRVLPMYAGLPSPDQMKVFERVSRSVR 336
Query: 244 KIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
K+++ATN+AETSITI I YV+DCG K+ ++ K I L +S A+A QR GRAGR
Sbjct: 337 KVIVATNVAETSITIHGIAYVIDCGFVKLRAYNPKTAIECLVVVPVSKASANQRAGRAGR 396
Score = 76 (31.8 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 15/34 (44%), Positives = 24/34 (70%)
Query: 51 EARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+ R+KLP +++R+ +L +V + Q VI GETG G
Sbjct: 49 QQRQKLPVFKLRNHILYLVESYQTLVIVGETGCG 82
>CGD|CAL0000153 [details] [associations]
symbol:orf19.1687 species:5476 "Candida albicans" [GO:0030686
"90S preribosome" evidence=IEA] [GO:0071014 "post-mRNA release
spliceosomal complex" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000390 "spliceosomal complex disassembly" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0000153 GO:GO:0005524 GO:GO:0003676 EMBL:AACQ01000014
EMBL:AACQ01000013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12820 RefSeq:XP_721644.1
RefSeq:XP_721764.1 STRING:Q5AJA5 GeneID:3636669 GeneID:3636709
KEGG:cal:CaO19.1687 KEGG:cal:CaO19.9255 Uniprot:Q5AJA5
Length = 767
Score = 184 (69.8 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 51/128 (39%), Positives = 71/128 (55%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFF-----NSSRFQIIPLHSMLPTVSQKSIF-----NTP 238
IL+FL G + I R + N ++ PL+ LP Q+ IF N
Sbjct: 307 ILLFLTGEEEIEDACRKISLEGDELVREQNCGPLKVYPLYGSLPPHQQQKIFEPAPTNPN 366
Query: 239 PEGV--RKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQ 296
P G RK++++TNIAETS+TID IVYVVD G +K ++ + + +L IS A+A+Q
Sbjct: 367 PNGRPGRKVIISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRVRVESLLVSPISKASAQQ 426
Query: 297 RRGRAGRT 304
R GRAGRT
Sbjct: 427 RAGRAGRT 434
Score = 90 (36.7 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 26/77 (33%), Positives = 38/77 (49%)
Query: 8 KGLTHSVTSWETRQKLLNDPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLD 67
KGL T+ E QKL + P K + +Y ++L+ R+ LP + R+ L
Sbjct: 52 KGLIRHQTTAEQAQKLEDGP------KNPFTGHDFTTKYFDILKTRRDLPVHAQREEFLK 105
Query: 68 MVRNNQITVISGETGSG 84
+ + QI V GETGSG
Sbjct: 106 IFHSTQIMVFVGETGSG 122
>ZFIN|ZDB-GENE-030131-650 [details] [associations]
symbol:dhx15 "DEAH (Asp-Glu-Ala-His) box
polypeptide 15" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-030131-650 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA CTD:1665 EMBL:CU651678 IPI:IPI00481686
RefSeq:NP_001108613.1 UniGene:Dr.4024 Ensembl:ENSDART00000081245
GeneID:321931 KEGG:dre:321931 NextBio:20807587 Uniprot:E7F3I8
Length = 769
Score = 190 (71.9 bits), Expect = 2.6e-15, Sum P(2) = 2.6e-15
Identities = 44/93 (47%), Positives = 61/93 (65%)
Query: 218 QIIPLHSMLPTVSQKSIFNTPP----EGV--RKIVLATNIAETSITIDDIVYVVDCGKTK 271
+IIPL+S LP Q+ IF PP G RK+V++TNIAETS+TID +V+V+D G K
Sbjct: 358 KIIPLYSTLPPQQQQRIFEPPPPRKPNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAK 417
Query: 272 MSNFDVKDNIATLKPEWISLANAKQRRGRAGRT 304
++ + + +L IS A+A+QR GRAGRT
Sbjct: 418 QKVYNPRIRVESLLVTAISKASAQQRAGRAGRT 450
Score = 82 (33.9 bits), Expect = 2.6e-15, Sum P(2) = 2.6e-15
Identities = 16/40 (40%), Positives = 27/40 (67%)
Query: 45 RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
RY E+L+ R +LP ++ ++ D++ +Q V+ GETGSG
Sbjct: 100 RYYEILKKRLQLPVWEYKERFNDILNRHQSFVLVGETGSG 139
>UNIPROTKB|I3LU50 [details] [associations]
symbol:I3LU50 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192
GO:GO:0008026 GeneTree:ENSGT00700000104421
Ensembl:ENSSSCT00000026672 OMA:GHEVAFS Uniprot:I3LU50
Length = 265
Score = 200 (75.5 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 43/111 (38%), Positives = 67/111 (60%)
Query: 189 ILVFLPGWDTINSLHRSMCQ--SSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIV 246
IL+F+PG + I + + N+ ++P++S LP+ Q IF P+GVRK +
Sbjct: 153 ILIFMPGQEDIEVTSDQIVEHLEELENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCI 212
Query: 247 LATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQR 297
+ATNIAETS+T+D I++V+D G K+ F+ + + L+ IS ANA QR
Sbjct: 213 VATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQR 263
>WB|WBGene00022056 [details] [associations]
symbol:Y67D2.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GeneTree:ENSGT00700000104241 EMBL:FO081642 RefSeq:NP_497420.1
ProteinModelPortal:Q9BKQ8 SMR:Q9BKQ8 MINT:MINT-1068531
STRING:Q9BKQ8 PaxDb:Q9BKQ8 EnsemblMetazoa:Y67D2.6 GeneID:175308
KEGG:cel:CELE_Y67D2.6 UCSC:Y67D2.6 CTD:175308 WormBase:Y67D2.6
InParanoid:Q9BKQ8 KO:K13117 OMA:NIFVVPP NextBio:887600
Uniprot:Q9BKQ8
Length = 732
Score = 214 (80.4 bits), Expect = 2.8e-15, Sum P(2) = 2.8e-15
Identities = 51/144 (35%), Positives = 74/144 (51%)
Query: 189 ILVFLPGWDTINSLHRSMCQ--SSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIV 246
ILVFL G D + + + + + N R ++P + LP Q F++ P G RK+V
Sbjct: 299 ILVFLTGQDEVEDVCEKLRELAGNLKNCDRLWVVPCYGALPAREQMKAFDSTPHGTRKVV 358
Query: 247 LATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLK 306
+ATNIAE SITI I YV+D G K+ + + TL +S A+A+QR GRAGR
Sbjct: 359 VATNIAEASITIPGICYVIDTGYVKLRAQHAANGVETLMRVTVSKASAEQRAGRAGRIRP 418
Query: 307 RSETQQYPNDVLNMLKD---PELE 327
+ YP + PE++
Sbjct: 419 GKCYRLYPESEFERFAEGTVPEIQ 442
Score = 55 (24.4 bits), Expect = 2.8e-15, Sum P(2) = 2.8e-15
Identities = 12/34 (35%), Positives = 19/34 (55%)
Query: 51 EARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+ R +LP ++ R +L M + +I GETG G
Sbjct: 72 QQRIRLPIFKNRGHILYMCERYRTIIIVGETGCG 105
>UNIPROTKB|A5D7D9 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005689 "U12-type spliceosomal complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820
GeneTree:ENSGT00650000093246 OMA:TVLQIHA CTD:1665
HOVERGEN:HBG039428 OrthoDB:EOG4K6G3N GO:GO:0005689
EMBL:DAAA02017121 EMBL:BC140520 IPI:IPI00709068
RefSeq:NP_001091487.1 UniGene:Bt.58909 Ensembl:ENSBTAT00000011714
GeneID:512327 KEGG:bta:512327 InParanoid:A5D7D9 NextBio:20870343
Uniprot:A5D7D9
Length = 795
Score = 190 (71.9 bits), Expect = 2.8e-15, Sum P(2) = 2.8e-15
Identities = 44/93 (47%), Positives = 61/93 (65%)
Query: 218 QIIPLHSMLPTVSQKSIFNTPP----EGV--RKIVLATNIAETSITIDDIVYVVDCGKTK 271
+IIPL+S LP Q+ IF PP G RK+V++TNIAETS+TID +V+V+D G K
Sbjct: 384 KIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAK 443
Query: 272 MSNFDVKDNIATLKPEWISLANAKQRRGRAGRT 304
++ + + +L IS A+A+QR GRAGRT
Sbjct: 444 QKVYNPRIRVESLLVTAISKASAQQRAGRAGRT 476
Score = 82 (33.9 bits), Expect = 2.8e-15, Sum P(2) = 2.8e-15
Identities = 16/40 (40%), Positives = 27/40 (67%)
Query: 45 RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
RY ++L+ R +LP ++ +D D++ +Q V+ GETGSG
Sbjct: 126 RYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSG 165
>UNIPROTKB|E2R2U3 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005689 "U12-type spliceosomal complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
CTD:1665 GO:GO:0005689 EMBL:AAEX03002593 EMBL:AAEX03002594
RefSeq:XP_851535.1 Ensembl:ENSCAFT00000026155 GeneID:488856
KEGG:cfa:488856 NextBio:20862139 Uniprot:E2R2U3
Length = 795
Score = 190 (71.9 bits), Expect = 2.8e-15, Sum P(2) = 2.8e-15
Identities = 44/93 (47%), Positives = 61/93 (65%)
Query: 218 QIIPLHSMLPTVSQKSIFNTPP----EGV--RKIVLATNIAETSITIDDIVYVVDCGKTK 271
+IIPL+S LP Q+ IF PP G RK+V++TNIAETS+TID +V+V+D G K
Sbjct: 384 KIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAK 443
Query: 272 MSNFDVKDNIATLKPEWISLANAKQRRGRAGRT 304
++ + + +L IS A+A+QR GRAGRT
Sbjct: 444 QKVYNPRIRVESLLVTAISKASAQQRAGRAGRT 476
Score = 82 (33.9 bits), Expect = 2.8e-15, Sum P(2) = 2.8e-15
Identities = 16/40 (40%), Positives = 27/40 (67%)
Query: 45 RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
RY ++L+ R +LP ++ +D D++ +Q V+ GETGSG
Sbjct: 126 RYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSG 165
>UNIPROTKB|O43143 [details] [associations]
symbol:DHX15 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX15" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=TAS] [GO:0008380 "RNA splicing" evidence=IC]
[GO:0005689 "U12-type spliceosomal complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 EMBL:AB001636 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 GO:GO:0003724
KO:K12820 OMA:TVLQIHA EMBL:AF279891 EMBL:BC035974 IPI:IPI00396435
PIR:JC5785 RefSeq:NP_001349.2 UniGene:Hs.696074
ProteinModelPortal:O43143 SMR:O43143 DIP:DIP-38211N IntAct:O43143
MINT:MINT-5003827 STRING:O43143 PhosphoSite:O43143
SWISS-2DPAGE:O43143 PaxDb:O43143 PRIDE:O43143
Ensembl:ENST00000336812 GeneID:1665 KEGG:hsa:1665 UCSC:uc003gqx.3
CTD:1665 GeneCards:GC04M024519 HGNC:HGNC:2738 HPA:HPA047047
MIM:603403 neXtProt:NX_O43143 PharmGKB:PA27204 HOVERGEN:HBG039428
InParanoid:O43143 OrthoDB:EOG4K6G3N GenomeRNAi:1665 NextBio:6852
ArrayExpress:O43143 Bgee:O43143 CleanEx:HS_DHX15
Genevestigator:O43143 GermOnline:ENSG00000109606 GO:GO:0005689
Uniprot:O43143
Length = 795
Score = 190 (71.9 bits), Expect = 2.8e-15, Sum P(2) = 2.8e-15
Identities = 44/93 (47%), Positives = 61/93 (65%)
Query: 218 QIIPLHSMLPTVSQKSIFNTPP----EGV--RKIVLATNIAETSITIDDIVYVVDCGKTK 271
+IIPL+S LP Q+ IF PP G RK+V++TNIAETS+TID +V+V+D G K
Sbjct: 384 KIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAK 443
Query: 272 MSNFDVKDNIATLKPEWISLANAKQRRGRAGRT 304
++ + + +L IS A+A+QR GRAGRT
Sbjct: 444 QKVYNPRIRVESLLVTAISKASAQQRAGRAGRT 476
Score = 82 (33.9 bits), Expect = 2.8e-15, Sum P(2) = 2.8e-15
Identities = 16/40 (40%), Positives = 27/40 (67%)
Query: 45 RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
RY ++L+ R +LP ++ +D D++ +Q V+ GETGSG
Sbjct: 126 RYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSG 165
>UNIPROTKB|F1S5A8 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005689 "U12-type spliceosomal complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00650000093246 OMA:TVLQIHA GO:GO:0005689
EMBL:CU633303 Ensembl:ENSSSCT00000009580 Uniprot:F1S5A8
Length = 795
Score = 190 (71.9 bits), Expect = 2.8e-15, Sum P(2) = 2.8e-15
Identities = 44/93 (47%), Positives = 61/93 (65%)
Query: 218 QIIPLHSMLPTVSQKSIFNTPP----EGV--RKIVLATNIAETSITIDDIVYVVDCGKTK 271
+IIPL+S LP Q+ IF PP G RK+V++TNIAETS+TID +V+V+D G K
Sbjct: 384 KIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAK 443
Query: 272 MSNFDVKDNIATLKPEWISLANAKQRRGRAGRT 304
++ + + +L IS A+A+QR GRAGRT
Sbjct: 444 QKVYNPRIRVESLLVTAISKASAQQRAGRAGRT 476
Score = 82 (33.9 bits), Expect = 2.8e-15, Sum P(2) = 2.8e-15
Identities = 16/40 (40%), Positives = 27/40 (67%)
Query: 45 RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
RY ++L+ R +LP ++ +D D++ +Q V+ GETGSG
Sbjct: 126 RYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSG 165
>MGI|MGI:1099786 [details] [associations]
symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box polypeptide 15"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005689 "U12-type spliceosomal complex" evidence=ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
MGI:MGI:1099786 GO:GO:0005524 GO:GO:0005730 GO:GO:0008380
GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820 OMA:TVLQIHA CTD:1665
HOVERGEN:HBG039428 OrthoDB:EOG4K6G3N GO:GO:0005689 EMBL:AF017153
EMBL:BC003745 IPI:IPI00128818 RefSeq:NP_031865.2 UniGene:Mm.993
ProteinModelPortal:O35286 SMR:O35286 STRING:O35286
PhosphoSite:O35286 PaxDb:O35286 PRIDE:O35286
Ensembl:ENSMUST00000031061 GeneID:13204 KEGG:mmu:13204
InParanoid:O35286 NextBio:283358 Bgee:O35286 CleanEx:MM_DHX15
Genevestigator:O35286 GermOnline:ENSMUSG00000029169 Uniprot:O35286
Length = 795
Score = 190 (71.9 bits), Expect = 2.8e-15, Sum P(2) = 2.8e-15
Identities = 44/93 (47%), Positives = 61/93 (65%)
Query: 218 QIIPLHSMLPTVSQKSIFNTPP----EGV--RKIVLATNIAETSITIDDIVYVVDCGKTK 271
+IIPL+S LP Q+ IF PP G RK+V++TNIAETS+TID +V+V+D G K
Sbjct: 384 KIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAK 443
Query: 272 MSNFDVKDNIATLKPEWISLANAKQRRGRAGRT 304
++ + + +L IS A+A+QR GRAGRT
Sbjct: 444 QKVYNPRIRVESLLVTAISKASAQQRAGRAGRT 476
Score = 82 (33.9 bits), Expect = 2.8e-15, Sum P(2) = 2.8e-15
Identities = 16/40 (40%), Positives = 27/40 (67%)
Query: 45 RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
RY ++L+ R +LP ++ +D D++ +Q V+ GETGSG
Sbjct: 126 RYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSG 165
>RGD|1308072 [details] [associations]
symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box polypeptide 15"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005689 "U12-type
spliceosomal complex" evidence=IEA;ISO] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 RGD:1308072 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA CTD:1665 OrthoDB:EOG4K6G3N GO:GO:0005689 EMBL:CH473963
IPI:IPI00361832 RefSeq:NP_001178526.1 UniGene:Rn.55597
Ensembl:ENSRNOT00000005126 GeneID:289693 KEGG:rno:289693
NextBio:630162 Uniprot:D3ZD97
Length = 795
Score = 190 (71.9 bits), Expect = 2.8e-15, Sum P(2) = 2.8e-15
Identities = 44/93 (47%), Positives = 61/93 (65%)
Query: 218 QIIPLHSMLPTVSQKSIFNTPP----EGV--RKIVLATNIAETSITIDDIVYVVDCGKTK 271
+IIPL+S LP Q+ IF PP G RK+V++TNIAETS+TID +V+V+D G K
Sbjct: 384 KIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAK 443
Query: 272 MSNFDVKDNIATLKPEWISLANAKQRRGRAGRT 304
++ + + +L IS A+A+QR GRAGRT
Sbjct: 444 QKVYNPRIRVESLLVTAISKASAQQRAGRAGRT 476
Score = 82 (33.9 bits), Expect = 2.8e-15, Sum P(2) = 2.8e-15
Identities = 16/40 (40%), Positives = 27/40 (67%)
Query: 45 RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
RY ++L+ R +LP ++ +D D++ +Q V+ GETGSG
Sbjct: 126 RYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSG 165
>UNIPROTKB|F1MVJ1 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9913 "Bos taurus" [GO:0071013 "catalytic
step 2 spliceosome" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00700000104421 OMA:PSRSTWE
IPI:IPI00690755 EMBL:DAAA02046748 EMBL:DAAA02046749
Ensembl:ENSBTAT00000045480 ArrayExpress:F1MVJ1 Uniprot:F1MVJ1
Length = 1226
Score = 183 (69.5 bits), Expect = 3.9e-15, Sum P(2) = 3.9e-15
Identities = 51/159 (32%), Positives = 80/159 (50%)
Query: 189 ILVFLPGWDTINSLHRSMCQ--SSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIV 246
IL+F+PG + I + + N+ ++P++S LP+ Q IF P+GVRK +
Sbjct: 743 ILIFMPGQEDIEVTSDQIVEHLEELENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCI 802
Query: 247 LATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLK 306
+ATNIAETS+T+D I++V+D G K+ + LK I G +G T
Sbjct: 803 VATNIAETSLTVDGIMFVIDSGYCKLKVSSPSLGGSDLKIMEIQKIQKNINTGCSGCTSP 862
Query: 307 RS---ETQQ-YPNDVLNMLKDPELEGVNNDVIFSLLQHI 341
R TQ Y N++L PE++ N + LL+ +
Sbjct: 863 RCCRLYTQSAYKNELLTTTV-PEIQRTNLANVVLLLKSL 900
Score = 93 (37.8 bits), Expect = 3.9e-15, Sum P(2) = 3.9e-15
Identities = 26/91 (28%), Positives = 44/91 (48%)
Query: 1 MKSPHSP-KGLTHS-VTSWETRQKLLNDPVLDAAFKKEMIRKLQSRRYQEMLEARKKLPS 58
+K P K LT + T QK + KK+ + + + +LE R+ LP
Sbjct: 481 VKKEEEPDKSLTEDGKVDYRTEQKFADH------MKKKSEASSEFAKKKSILEQRQYLPI 534
Query: 59 YQMRDAVLDMVRNNQITVISGETGSGPPLHL 89
+ ++ +L ++R+N I ++ GETGSG L
Sbjct: 535 FAVQQELLTIIRDNSIVIVVGETGSGKTTQL 565
>UNIPROTKB|H0YJJ2 [details] [associations]
symbol:TDRD9 "Putative ATP-dependent RNA helicase TDRD9"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 InterPro:IPR002999 GO:GO:0005524
GO:GO:0003676 GO:GO:0004386 Pfam:PF00567 SMART:SM00333
PROSITE:PS50304 EMBL:AL136001 EMBL:AL132712 HGNC:HGNC:20122
Ensembl:ENST00000557332 Uniprot:H0YJJ2
Length = 918
Score = 227 (85.0 bits), Expect = 5.4e-15, Sum P(2) = 5.4e-15
Identities = 48/115 (41%), Positives = 70/115 (60%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPG IN +H + +S + R Q+ PLHS + Q ++F +P G RKI+L+
Sbjct: 115 VLVFLPGLGEINYMHELL--TSLVHK-RLQVYPLHSSVALEEQNNVFLSPVPGYRKIILS 171
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
TNIAE+S+T+ D+ YV+D T+ D N +L+ W S + QR+GRAGR
Sbjct: 172 TNIAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCNQRKGRAGR 226
Score = 41 (19.5 bits), Expect = 5.4e-15, Sum P(2) = 5.4e-15
Identities = 10/40 (25%), Positives = 21/40 (52%)
Query: 390 EIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKL-SHP 428
E++ V + + ++I+K+L A ++ L L +HP
Sbjct: 633 EVVEVGHFWGYRIDENNSEILKKLTAEINQLTLVPLPTHP 672
>UNIPROTKB|Q9KS77 [details] [associations]
symbol:VC1382 "ATP-dependent helicase HrpA" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0004386
"helicase activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GenomeReviews:AE003852_GR GO:GO:0003676 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 InterPro:IPR024590 Pfam:PF11898
TIGRFAMs:TIGR01967 EMBL:AE004217 PIR:F82207 RefSeq:NP_231026.2
ProteinModelPortal:Q9KS77 DNASU:2614836 GeneID:2614836
KEGG:vch:VC1382 PATRIC:20081832 Uniprot:Q9KS77
Length = 1309
Score = 191 (72.3 bits), Expect = 6.5e-15, Sum P(2) = 6.5e-15
Identities = 51/145 (35%), Positives = 79/145 (54%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL+F+ G I ++ + + ++ +I+PL++ L Q IF P R+IVLA
Sbjct: 304 ILIFMNGEREIRDTADALSKRNLRDT---EIVPLYARLSAGEQNKIFQ--PHAGRRIVLA 358
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TN+AETS+T+ I YV+D G ++S + + + L E IS A+A QR+GR GRT +
Sbjct: 359 TNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRTEEGI 418
Query: 309 ETQQYPN-DVLNM--LKDPELEGVN 330
+ Y D L+ DPE+ N
Sbjct: 419 CIRLYSEEDFLSRPEFTDPEILRTN 443
Score = 83 (34.3 bits), Expect = 6.5e-15, Sum P(2) = 6.5e-15
Identities = 23/75 (30%), Positives = 39/75 (52%)
Query: 22 KLLNDPVLDAAFKKEMIRKLQS-----RRYQEM--LEARKKLPSYQMRDAVLDMVRNNQI 74
K+ N+ +A F + + QS +R Q+M +E LP Q RD + + ++Q+
Sbjct: 46 KIKNESARNAVFDEIALDIAQSMMVVEQRKQQMPKIEYPALLPVSQKRDDIAQAIAHHQV 105
Query: 75 TVISGETGSGPPLHL 89
+++GETGSG L
Sbjct: 106 VIVAGETGSGKTTQL 120
>TIGR_CMR|VC_1382 [details] [associations]
symbol:VC_1382 "ATP-dependent helicase HrpA" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0004386 "helicase activity"
evidence=ISS] [GO:0008152 "metabolic process" evidence=ISS]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR010222 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GenomeReviews:AE003852_GR GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 InterPro:IPR024590 Pfam:PF11898
TIGRFAMs:TIGR01967 EMBL:AE004217 PIR:F82207 RefSeq:NP_231026.2
ProteinModelPortal:Q9KS77 DNASU:2614836 GeneID:2614836
KEGG:vch:VC1382 PATRIC:20081832 Uniprot:Q9KS77
Length = 1309
Score = 191 (72.3 bits), Expect = 6.5e-15, Sum P(2) = 6.5e-15
Identities = 51/145 (35%), Positives = 79/145 (54%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL+F+ G I ++ + + ++ +I+PL++ L Q IF P R+IVLA
Sbjct: 304 ILIFMNGEREIRDTADALSKRNLRDT---EIVPLYARLSAGEQNKIFQ--PHAGRRIVLA 358
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TN+AETS+T+ I YV+D G ++S + + + L E IS A+A QR+GR GRT +
Sbjct: 359 TNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRTEEGI 418
Query: 309 ETQQYPN-DVLNM--LKDPELEGVN 330
+ Y D L+ DPE+ N
Sbjct: 419 CIRLYSEEDFLSRPEFTDPEILRTN 443
Score = 83 (34.3 bits), Expect = 6.5e-15, Sum P(2) = 6.5e-15
Identities = 23/75 (30%), Positives = 39/75 (52%)
Query: 22 KLLNDPVLDAAFKKEMIRKLQS-----RRYQEM--LEARKKLPSYQMRDAVLDMVRNNQI 74
K+ N+ +A F + + QS +R Q+M +E LP Q RD + + ++Q+
Sbjct: 46 KIKNESARNAVFDEIALDIAQSMMVVEQRKQQMPKIEYPALLPVSQKRDDIAQAIAHHQV 105
Query: 75 TVISGETGSGPPLHL 89
+++GETGSG L
Sbjct: 106 VIVAGETGSGKTTQL 120
>UNIPROTKB|F1NHI3 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005689 "U12-type spliceosomal complex"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
GO:GO:0005689 EMBL:AADN02015408 EMBL:AADN02015409 EMBL:AADN02015410
IPI:IPI00577528 Ensembl:ENSGALT00000023259 Uniprot:F1NHI3
Length = 762
Score = 190 (71.9 bits), Expect = 6.5e-15, Sum P(2) = 6.5e-15
Identities = 44/93 (47%), Positives = 61/93 (65%)
Query: 218 QIIPLHSMLPTVSQKSIFNTPP----EGV--RKIVLATNIAETSITIDDIVYVVDCGKTK 271
+IIPL+S LP Q+ IF PP G RK+V++TNIAETS+TID +V+V+D G K
Sbjct: 351 KIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAK 410
Query: 272 MSNFDVKDNIATLKPEWISLANAKQRRGRAGRT 304
++ + + +L IS A+A+QR GRAGRT
Sbjct: 411 QKVYNPRIRVESLLVTAISKASAQQRAGRAGRT 443
Score = 78 (32.5 bits), Expect = 6.5e-15, Sum P(2) = 6.5e-15
Identities = 15/40 (37%), Positives = 27/40 (67%)
Query: 45 RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
RY ++L+ R +LP ++ ++ D++ +Q V+ GETGSG
Sbjct: 93 RYYDILKKRLQLPVWEYKERFTDILIRHQSFVLVGETGSG 132
>DICTYBASE|DDB_G0285843 [details] [associations]
symbol:helD "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 dictyBase:DDB_G0285843 GO:GO:0005524
GenomeReviews:CM000153_GR GO:GO:0005681 GO:GO:0003676
EMBL:AAFI02000082 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
KO:K12815 RefSeq:XP_638016.1 EnsemblProtists:DDB0191460
GeneID:8625367 KEGG:ddi:DDB_G0285843 InParanoid:Q54MH4
ProtClustDB:CLSZ2846702 Uniprot:Q54MH4
Length = 1387
Score = 200 (75.5 bits), Expect = 6.8e-15, Sum P(3) = 6.8e-15
Identities = 54/157 (34%), Positives = 85/157 (54%)
Query: 189 ILVFLPGWDTINSLHRSM---CQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVF+ G + I + ++ + + ++P++S LP+ Q IF G RK
Sbjct: 870 ILVFMTGQEDIETTCATVEERIKQLGPQAPPLTLLPIYSQLPSDMQAKIFEKADNGSRKC 929
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTL 305
++ATNIAETS+T+D I+YV+D G K+ ++ + + +L+ IS ANA QR GRAGRT
Sbjct: 930 IIATNIAETSLTVDGILYVIDTGYCKLKVYNPRVGMDSLQVTPISKANANQRSGRAGRTG 989
Query: 306 KRSETQQYPNDVLNM-LKD---PELEGVN-NDVIFSL 337
+ Y L D PE++ N +V+ +L
Sbjct: 990 PGRCYRLYTESAFKYELMDNNIPEIQRTNLGNVVLNL 1026
Score = 77 (32.2 bits), Expect = 6.8e-15, Sum P(3) = 6.8e-15
Identities = 15/39 (38%), Positives = 24/39 (61%)
Query: 51 EARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHL 89
E R+ LP + R+ ++ ++R N + +I GETGSG L
Sbjct: 654 EQREFLPIFGCRNDLMKIIRENNVIIIVGETGSGKTTQL 692
Score = 40 (19.1 bits), Expect = 6.8e-15, Sum P(3) = 6.8e-15
Identities = 16/69 (23%), Positives = 30/69 (43%)
Query: 90 DFITLKRSETQQYPNDVLNMLKDPELE-GVNNDVIFSLLQHICTTQRPGAILVYCTYTFM 148
D I L+ S + ++ D E +N DV+F +L+ + + + ++V T M
Sbjct: 757 DGILLRESFNDPNLDKYSAIIMDEAHERSLNTDVLFGILKKVMSRRYDMKLIV--TSATM 814
Query: 149 GVSPMKVFF 157
+FF
Sbjct: 815 DSKKFSMFF 823
>UNIPROTKB|Q608K8 [details] [associations]
symbol:MCA1482 "ATP-dependent helicase HrpA" species:243233
"Methylococcus capsulatus str. Bath" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR010222
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:AE017282 GenomeReviews:AE017282_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578
OMA:TYQFEPG InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:YP_113939.1 ProteinModelPortal:Q608K8 GeneID:3104911
KEGG:mca:MCA1482 PATRIC:22606802 Uniprot:Q608K8
Length = 1294
Score = 187 (70.9 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 53/145 (36%), Positives = 76/145 (52%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL+FL G I S+ + + + +++PL+S L Q+ IF P G R+IVLA
Sbjct: 293 ILIFLSGEREIRDTAESLRKH---HPADCEVLPLYSRLTVSEQEKIFK--PHGRRRIVLA 347
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TN+AETS+T+ I V+D G ++S + + + L E IS A+A QR GR GR
Sbjct: 348 TNVAETSLTVPGIRGVIDAGYARISRYSHRSKLQRLPIEKISRASANQRAGRCGRVGPGV 407
Query: 309 ETQQYPN-DVLNM--LKDPELEGVN 330
+ Y D LN DPE+ N
Sbjct: 408 CIRLYSEQDFLNRPEFTDPEILRTN 432
Score = 85 (35.0 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 17/46 (36%), Positives = 27/46 (58%)
Query: 50 LEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHLDFITLK 95
LE ++LP + R + + +R NQ+ ++ GETGSG L I L+
Sbjct: 68 LEYPEELPVSERRGEIAEAIRQNQVVIVCGETGSGKTTQLPKICLE 113
>ZFIN|ZDB-GENE-070410-11 [details] [associations]
symbol:zgc:158828 "zgc:158828" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-070410-11
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HOVERGEN:HBG039428 OrthoDB:EOG4V9TQ5
EMBL:BC117646 IPI:IPI00851766 UniGene:Dr.86097 Uniprot:Q1ECW4
Length = 691
Score = 184 (69.8 bits), Expect = 1.4e-14, Sum P(3) = 1.4e-14
Identities = 51/151 (33%), Positives = 80/151 (52%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQ------IIPLHSMLPTVSQKSIFNTPPEGV 242
+L FL G + + + S+ Q SR+ ++P+++ LP Q +F V
Sbjct: 267 VLAFLTGQEEVEKVV-SLLQEQARTLSRYGMKKHLCVLPMYAGLPYNEQMRVFERMAPTV 325
Query: 243 RKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAG 302
RK+V+ATNIAETSITI+ +V+V+DC K+ ++ + I +L IS A+A QR GRAG
Sbjct: 326 RKVVVATNIAETSITINGVVFVIDCAFVKIRAYNPRTAIESLIVTPISKASACQRAGRAG 385
Query: 303 RTLKRSETQQYPNDVLNMLKD---PELEGVN 330
R + Y + L + PE++ N
Sbjct: 386 RNRAGKCFRLYTEEDFEKLPESTVPEMQRSN 416
Score = 73 (30.8 bits), Expect = 1.4e-14, Sum P(3) = 1.4e-14
Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 53 RKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
R++LP ++ R+ +L +V + Q VI GETGSG
Sbjct: 41 RQRLPVFKHRNNILYLVESFQTVVIVGETGSG 72
Score = 47 (21.6 bits), Expect = 1.4e-14, Sum P(3) = 1.4e-14
Identities = 16/37 (43%), Positives = 22/37 (59%)
Query: 413 LRARLDMLLAHKLSHPGTTAWGDPNEGNILHCC-SGF 448
+R +L LL +K P T++ GDP+ IL C SGF
Sbjct: 571 VREQLRHLL-NKFKVPRTSSEGDPDV--ILRCIVSGF 604
>POMBASE|SPAC20H4.09 [details] [associations]
symbol:SPAC20H4.09 "ATP-dependent RNA helicase,
spliceosomal (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IC;ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0005829 "cytosol" evidence=IDA] [GO:0045292 "mRNA cis splicing,
via spliceosome" evidence=ISS] [GO:0071276 "cellular response to
cadmium ion" evidence=IMP] [GO:0071585 "detoxification of cadmium
ion" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPAC20H4.09
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 EMBL:CU329670
GO:GO:0008380 GO:GO:0071276 GO:GO:0071585 GO:GO:0006397
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 RefSeq:NP_593629.1 ProteinModelPortal:Q9HE06
EnsemblFungi:SPAC20H4.09.1 GeneID:2542874 KEGG:spo:SPAC20H4.09
OMA:NYSVIIL OrthoDB:EOG4BGD47 NextBio:20803914 Uniprot:Q9HE06
Length = 647
Score = 193 (73.0 bits), Expect = 1.6e-14, Sum P(2) = 1.6e-14
Identities = 55/149 (36%), Positives = 78/149 (52%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQII---PLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVFL G I + + S S Q + PLH+ L Q +FN RK+
Sbjct: 239 ILVFLSGRKEIEYCIKKIEDSLIHASEDCQTLVPLPLHAGLTVDEQMRVFNIYDGDFRKV 298
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTL 305
+ +TNIAETSITID IVYVVD G K ++ + L IS ++A QR GRAGRT+
Sbjct: 299 IFSTNIAETSITIDGIVYVVDSGFNKQRIYNPYTRTSKLINVPISKSSAIQRSGRAGRTM 358
Query: 306 KRSETQQYPNDVLNMLKDP-ELEGVNNDV 333
+ + Y +++K+ E + +N D+
Sbjct: 359 RGKVFRLYTEKAYSLMKEEFEADILNCDM 387
Score = 69 (29.3 bits), Expect = 1.6e-14, Sum P(2) = 1.6e-14
Identities = 19/50 (38%), Positives = 26/50 (52%)
Query: 36 EMIRKLQSRRYQEMLEARKKL-PSYQMRDAVLDMVRNNQITVISGETGSG 84
E I + S L +KKL P + R+ +L V NQIT++ G TG G
Sbjct: 4 EFISQSLSTLTNTPLNIQKKLLPITKYRNQLLYAVEQNQITIVLGHTGCG 53
>UNIPROTKB|E2RNZ8 [details] [associations]
symbol:TDRD9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 InterPro:IPR002999 GO:GO:0005524 GO:GO:0003676
GO:GO:0004386 Pfam:PF00567 PROSITE:PS50304
GeneTree:ENSGT00700000104393 EMBL:AAEX03006064 EMBL:AAEX03006065
EMBL:AAEX03006066 Ensembl:ENSCAFT00000029096 Uniprot:E2RNZ8
Length = 1115
Score = 227 (85.0 bits), Expect = 2.4e-14, Sum P(2) = 2.4e-14
Identities = 48/118 (40%), Positives = 68/118 (57%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPG IN +H + R Q+ PLHS + Q ++F +P G RKI+L+
Sbjct: 121 VLVFLPGLGEINYMHELLTNMVH---KRLQVYPLHSSVTLEEQNNVFLSPVPGYRKIILS 177
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLK 306
TNIAE+S+T+ D+ YV+D T+ D N +L+ W S + QR+GRAGR K
Sbjct: 178 TNIAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCNQRKGRAGRVSK 235
Score = 37 (18.1 bits), Expect = 2.4e-14, Sum P(2) = 2.4e-14
Identities = 10/40 (25%), Positives = 19/40 (47%)
Query: 390 EIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLS-HP 428
E++ V + ++I+K+L A ++ L L HP
Sbjct: 639 EVVEVGHFWGYRIDEKNSEILKKLTAEINQLKLVPLPVHP 678
>UNIPROTKB|J9P8U1 [details] [associations]
symbol:TDRD9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 InterPro:IPR002999 GO:GO:0005524 GO:GO:0003676
GO:GO:0004386 Pfam:PF00567 PROSITE:PS50304
GeneTree:ENSGT00700000104393 EMBL:AAEX03006064 EMBL:AAEX03006065
EMBL:AAEX03006066 Ensembl:ENSCAFT00000043378 Uniprot:J9P8U1
Length = 1120
Score = 227 (85.0 bits), Expect = 2.4e-14, Sum P(2) = 2.4e-14
Identities = 48/118 (40%), Positives = 68/118 (57%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPG IN +H + R Q+ PLHS + Q ++F +P G RKI+L+
Sbjct: 126 VLVFLPGLGEINYMHELLTNMVH---KRLQVYPLHSSVTLEEQNNVFLSPVPGYRKIILS 182
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLK 306
TNIAE+S+T+ D+ YV+D T+ D N +L+ W S + QR+GRAGR K
Sbjct: 183 TNIAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCNQRKGRAGRVSK 240
Score = 37 (18.1 bits), Expect = 2.4e-14, Sum P(2) = 2.4e-14
Identities = 10/40 (25%), Positives = 19/40 (47%)
Query: 390 EIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLS-HP 428
E++ V + ++I+K+L A ++ L L HP
Sbjct: 644 EVVEVGHFWGYRIDEKNSEILKKLTAEINQLKLVPLPVHP 683
>UNIPROTKB|E2RNZ9 [details] [associations]
symbol:TDRD9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 InterPro:IPR002999 GO:GO:0005524 GO:GO:0003676
GO:GO:0004386 Pfam:PF00567 PROSITE:PS50304
GeneTree:ENSGT00700000104393 OMA:INDWFTI EMBL:AAEX03006064
EMBL:AAEX03006065 EMBL:AAEX03006066 Ensembl:ENSCAFT00000029095
Uniprot:E2RNZ9
Length = 1127
Score = 227 (85.0 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
Identities = 48/118 (40%), Positives = 68/118 (57%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
+LVFLPG IN +H + R Q+ PLHS + Q ++F +P G RKI+L+
Sbjct: 133 VLVFLPGLGEINYMHELLTNMVH---KRLQVYPLHSSVTLEEQNNVFLSPVPGYRKIILS 189
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLK 306
TNIAE+S+T+ D+ YV+D T+ D N +L+ W S + QR+GRAGR K
Sbjct: 190 TNIAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCNQRKGRAGRVSK 247
Score = 37 (18.1 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
Identities = 10/40 (25%), Positives = 19/40 (47%)
Query: 390 EIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLS-HP 428
E++ V + ++I+K+L A ++ L L HP
Sbjct: 651 EVVEVGHFWGYRIDEKNSEILKKLTAEINQLKLVPLPVHP 690
>GENEDB_PFALCIPARUM|PFL1525c [details] [associations]
symbol:PFL1525c "pre-mRNA splicing factor RNA
helicase, putative" species:5833 "Plasmodium falciparum"
[GO:0051726 "regulation of cell cycle" evidence=ISS] [GO:0008380
"RNA splicing" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008380 GO:GO:0005681
GO:GO:0003676 GO:GO:0051726 EMBL:AE014188 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509 RefSeq:XP_001350711.1
ProteinModelPortal:Q8I5A4 IntAct:Q8I5A4 MINT:MINT-1581184
PRIDE:Q8I5A4 EnsemblProtists:PFL1525c:mRNA GeneID:811357
KEGG:pfa:PFL1525c EuPathDB:PlasmoDB:PF3D7_1231600
ProtClustDB:CLSZ2514931 Uniprot:Q8I5A4
Length = 1168
Score = 145 (56.1 bits), Expect = 8.0e-14, Sum P(3) = 8.0e-14
Identities = 34/68 (50%), Positives = 43/68 (63%)
Query: 236 NTPPEGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAK 295
NT + RKI+L+TNI ETSITID+IVYV+D G K ++ I +L S A+
Sbjct: 796 NTNNKIRRKIILSTNICETSITIDNIVYVIDSGLCKQKIYNPNSGIESLVTLPCSKASVN 855
Query: 296 QRRGRAGR 303
QR GRAGR
Sbjct: 856 QRTGRAGR 863
Score = 110 (43.8 bits), Expect = 8.0e-14, Sum P(3) = 8.0e-14
Identities = 20/54 (37%), Positives = 36/54 (66%)
Query: 36 EMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHL 89
E I+K + ++ +++++ RK+LP Y R +L ++NN+I ++ GETGSG L
Sbjct: 418 EDIKKRKEKKMKKIIDERKRLPIYSYRYDILKAIKNNKILILVGETGSGKSTQL 471
Score = 54 (24.1 bits), Expect = 8.0e-14, Sum P(3) = 8.0e-14
Identities = 17/55 (30%), Positives = 27/55 (49%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQ---IIPLHSMLPTVSQKSIFNTPPE 240
ILVFLPG I + + + + +++ I+P++S LP Q IF E
Sbjct: 649 ILVFLPGQYEIELVQQELENKLNELAPKYRNLVILPIYSSLPVEYQARIFEDVTE 703
Score = 46 (21.3 bits), Expect = 2.3e-07, Sum P(3) = 2.3e-07
Identities = 13/36 (36%), Positives = 18/36 (50%)
Query: 21 QKLLNDPVLDAAFKKEMIRKLQSRRYQEMLEARKKL 56
+KL N+ KK+ RK R +E L+ KKL
Sbjct: 54 KKLKNNEEYIEYLKKDARRKYLKEREKEKLDITKKL 89
>UNIPROTKB|Q8I5A4 [details] [associations]
symbol:PFL1525c "Pre-mRNA splicing factor RNA helicase,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0008380 "RNA splicing"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0008380 GO:GO:0005681 GO:GO:0003676
GO:GO:0051726 EMBL:AE014188 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 KO:K01509 RefSeq:XP_001350711.1
ProteinModelPortal:Q8I5A4 IntAct:Q8I5A4 MINT:MINT-1581184
PRIDE:Q8I5A4 EnsemblProtists:PFL1525c:mRNA GeneID:811357
KEGG:pfa:PFL1525c EuPathDB:PlasmoDB:PF3D7_1231600
ProtClustDB:CLSZ2514931 Uniprot:Q8I5A4
Length = 1168
Score = 145 (56.1 bits), Expect = 8.0e-14, Sum P(3) = 8.0e-14
Identities = 34/68 (50%), Positives = 43/68 (63%)
Query: 236 NTPPEGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAK 295
NT + RKI+L+TNI ETSITID+IVYV+D G K ++ I +L S A+
Sbjct: 796 NTNNKIRRKIILSTNICETSITIDNIVYVIDSGLCKQKIYNPNSGIESLVTLPCSKASVN 855
Query: 296 QRRGRAGR 303
QR GRAGR
Sbjct: 856 QRTGRAGR 863
Score = 110 (43.8 bits), Expect = 8.0e-14, Sum P(3) = 8.0e-14
Identities = 20/54 (37%), Positives = 36/54 (66%)
Query: 36 EMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHL 89
E I+K + ++ +++++ RK+LP Y R +L ++NN+I ++ GETGSG L
Sbjct: 418 EDIKKRKEKKMKKIIDERKRLPIYSYRYDILKAIKNNKILILVGETGSGKSTQL 471
Score = 54 (24.1 bits), Expect = 8.0e-14, Sum P(3) = 8.0e-14
Identities = 17/55 (30%), Positives = 27/55 (49%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQ---IIPLHSMLPTVSQKSIFNTPPE 240
ILVFLPG I + + + + +++ I+P++S LP Q IF E
Sbjct: 649 ILVFLPGQYEIELVQQELENKLNELAPKYRNLVILPIYSSLPVEYQARIFEDVTE 703
Score = 46 (21.3 bits), Expect = 2.3e-07, Sum P(3) = 2.3e-07
Identities = 13/36 (36%), Positives = 18/36 (50%)
Query: 21 QKLLNDPVLDAAFKKEMIRKLQSRRYQEMLEARKKL 56
+KL N+ KK+ RK R +E L+ KKL
Sbjct: 54 KKLKNNEEYIEYLKKDARRKYLKEREKEKLDITKKL 89
>ASPGD|ASPL0000059403 [details] [associations]
symbol:AN0133 species:162425 "Emericella nidulans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000390 "spliceosomal complex disassembly" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0071014 "post-mRNA release
spliceosomal complex" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:BN001308 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACD01000004 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820
OMA:TVLQIHA OrthoDB:EOG4S7NZ4 RefSeq:XP_657737.1 STRING:Q5BH47
EnsemblFungi:CADANIAT00002613 GeneID:2875910 KEGG:ani:AN0133.2
Uniprot:Q5BH47
Length = 769
Score = 168 (64.2 bits), Expect = 8.5e-14, Sum P(2) = 8.5e-14
Identities = 48/128 (37%), Positives = 70/128 (54%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSF-----FNSSRFQIIPLHSMLPTVSQKSIFNT--PPEG 241
IL+FL G + I R + ++ ++ L+ LP Q+ IF PP
Sbjct: 312 ILLFLTGEEEIEDAARKISLEGDEMIREADAGPLKVYTLYGSLPPHMQQRIFEPAPPPRR 371
Query: 242 V-----RKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQ 296
RK++++TNIAETS+TID IVYVVD G +K ++ + + +L IS A+A+Q
Sbjct: 372 PGGRPGRKVIVSTNIAETSLTIDGIVYVVDPGFSKQKIYNPRIRVESLLVSPISKASAQQ 431
Query: 297 RRGRAGRT 304
R GRAGRT
Sbjct: 432 RAGRAGRT 439
Score = 91 (37.1 bits), Expect = 8.5e-14, Sum P(2) = 8.5e-14
Identities = 20/53 (37%), Positives = 30/53 (56%)
Query: 43 SRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHL-DFITL 94
S +Y +L+ R+ LP + RD L + + +QI V GETGSG + F+ L
Sbjct: 86 SSKYFSILKTRRDLPVHAQRDEFLQLYQQSQILVFVGETGSGKTTQIPQFVLL 138
>GENEDB_PFALCIPARUM|PF08_0042 [details] [associations]
symbol:PF08_0042 "ATP-dependent RNA helicase
prh1, putative" species:5833 "Plasmodium falciparum" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509
EMBL:AL844507 RefSeq:XP_001349312.1 ProteinModelPortal:Q8IB47
EnsemblProtists:PF08_0042:mRNA GeneID:2655493 KEGG:pfa:PF08_0042
EuPathDB:PlasmoDB:PF3D7_0821300 ProtClustDB:CLSZ2515096
Uniprot:Q8IB47
Length = 867
Score = 199 (75.1 bits), Expect = 9.9e-14, Sum P(3) = 9.9e-14
Identities = 43/86 (50%), Positives = 55/86 (63%)
Query: 218 QIIPLHSMLPTVSQKSIFNTPPEGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDV 277
+I+ L+S LP QK IF P RK++L+TNIAETS+TI +I YV+D GK K+ FDV
Sbjct: 401 KILQLYSSLPNKKQKVIFEPVPPNTRKVILSTNIAETSVTIPNIKYVIDSGKVKIKYFDV 460
Query: 278 KDNIATLKPEWISLANAKQRRGRAGR 303
L+ IS +A QR GRAGR
Sbjct: 461 NRGSNVLRVTQISKDSAIQRSGRAGR 486
Score = 59 (25.8 bits), Expect = 9.9e-14, Sum P(3) = 9.9e-14
Identities = 9/31 (29%), Positives = 19/31 (61%)
Query: 54 KKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
++LP + + + +++ N + +I GETG G
Sbjct: 2 RELPILKYKHEIKKLIKKNNLIIIKGETGCG 32
Score = 40 (19.1 bits), Expect = 9.9e-14, Sum P(3) = 9.9e-14
Identities = 10/35 (28%), Positives = 17/35 (48%)
Query: 169 VGANSPKRWVKLLRSMLVVPILVFLPGWDTINSLH 203
+ N+ +K + ILVFLPG + I ++
Sbjct: 299 ISMNNINEDIKKTEDKSLGDILVFLPGQEEIEMVN 333
>UNIPROTKB|Q8IB47 [details] [associations]
symbol:PF08_0042 "ATP-dependent RNA helicase prh1,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509
EMBL:AL844507 RefSeq:XP_001349312.1 ProteinModelPortal:Q8IB47
EnsemblProtists:PF08_0042:mRNA GeneID:2655493 KEGG:pfa:PF08_0042
EuPathDB:PlasmoDB:PF3D7_0821300 ProtClustDB:CLSZ2515096
Uniprot:Q8IB47
Length = 867
Score = 199 (75.1 bits), Expect = 9.9e-14, Sum P(3) = 9.9e-14
Identities = 43/86 (50%), Positives = 55/86 (63%)
Query: 218 QIIPLHSMLPTVSQKSIFNTPPEGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDV 277
+I+ L+S LP QK IF P RK++L+TNIAETS+TI +I YV+D GK K+ FDV
Sbjct: 401 KILQLYSSLPNKKQKVIFEPVPPNTRKVILSTNIAETSVTIPNIKYVIDSGKVKIKYFDV 460
Query: 278 KDNIATLKPEWISLANAKQRRGRAGR 303
L+ IS +A QR GRAGR
Sbjct: 461 NRGSNVLRVTQISKDSAIQRSGRAGR 486
Score = 59 (25.8 bits), Expect = 9.9e-14, Sum P(3) = 9.9e-14
Identities = 9/31 (29%), Positives = 19/31 (61%)
Query: 54 KKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
++LP + + + +++ N + +I GETG G
Sbjct: 2 RELPILKYKHEIKKLIKKNNLIIIKGETGCG 32
Score = 40 (19.1 bits), Expect = 9.9e-14, Sum P(3) = 9.9e-14
Identities = 10/35 (28%), Positives = 17/35 (48%)
Query: 169 VGANSPKRWVKLLRSMLVVPILVFLPGWDTINSLH 203
+ N+ +K + ILVFLPG + I ++
Sbjct: 299 ISMNNINEDIKKTEDKSLGDILVFLPGQEEIEMVN 333
>DICTYBASE|DDB_G0269306 [details] [associations]
symbol:dhx35 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0269306 GO:GO:0005524
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K13117 OMA:NIFVVPP
RefSeq:XP_645858.1 ProteinModelPortal:Q55EC3
EnsemblProtists:DDB0233419 GeneID:8616802 KEGG:ddi:DDB_G0269306
InParanoid:Q55EC3 Uniprot:Q55EC3
Length = 716
Score = 187 (70.9 bits), Expect = 1.2e-13, Sum P(3) = 1.2e-13
Identities = 41/104 (39%), Positives = 64/104 (61%)
Query: 203 HRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEG--VRKIVLATNIAETSITIDD 260
H Q F ++ ++P++S L Q +F + + +RKI+++TNIAETSITID
Sbjct: 320 HHHQQQQPFM---KYSLLPMYSGLSINKQIKVFESVGDSKKIRKIIISTNIAETSITIDG 376
Query: 261 IVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRT 304
+VYVVDCG K+ ++D + + +L S ++A QR GRAGR+
Sbjct: 377 VVYVVDCGFVKIKSYDSESGLESLVIVPTSKSSANQRAGRAGRS 420
Score = 55 (24.4 bits), Expect = 1.2e-13, Sum P(3) = 1.2e-13
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 51 EARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+ R LP YQ R +L ++ VI G TG G
Sbjct: 50 QQRISLPIYQNRKHILYLLEKYSTLVIIGNTGCG 83
Score = 53 (23.7 bits), Expect = 1.2e-13, Sum P(3) = 1.2e-13
Identities = 17/55 (30%), Positives = 27/55 (49%)
Query: 90 DFITLKRSETQQYPNDVLNMLKDPELEGVNNDVIFSLLQHICTTQRPGAILVYCT 144
D T+ E + YP D+ + L++ + + + I TTQ PG ILV+ T
Sbjct: 243 DTSTILSIEGRTYPVDI-HYLEESTSNYIQTTI--QTIIDIHTTQPPGDILVFLT 294
>WB|WBGene00020263 [details] [associations]
symbol:T05E8.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0007413
"axonal fasciculation" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0006898 GO:GO:0040010
GO:GO:0040011 GO:GO:0003676 GO:GO:0040035 GO:GO:0007413
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GeneTree:ENSGT00700000104241 EMBL:FO080463 PIR:T29623
RefSeq:NP_491604.3 ProteinModelPortal:O01598 SMR:O01598
STRING:O01598 PaxDb:O01598 EnsemblMetazoa:T05E8.3 GeneID:172199
KEGG:cel:CELE_T05E8.3 UCSC:T05E8.3 CTD:172199 WormBase:T05E8.3
InParanoid:O01598 OMA:KEGCIME NextBio:874451 Uniprot:O01598
Length = 856
Score = 209 (78.6 bits), Expect = 1.4e-13, Sum P(3) = 1.4e-13
Identities = 61/181 (33%), Positives = 91/181 (50%)
Query: 189 ILVFLPGWDTINSLHRSMCQ--SSFFNSSRFQI-IPLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVFL G + I ++ + + S S+ + +PL++ L QK F P+G RK+
Sbjct: 383 ILVFLTGSEEIEAVASQLAELNGSLPASADVLMPVPLYAALRPEKQKEAFRKTPQGARKV 442
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTL 305
+++TNIAETS+TI I V+D GK K F+ + I LK +S A AKQR GRAGR
Sbjct: 443 IISTNIAETSVTIPGIRVVIDSGKVKTKRFEAFNRIDVLKVHNVSKAQAKQRAGRAGRDA 502
Query: 306 KRSETQQYPNDVLNMLKD---PELEGVNNDVIFSLLQHICTTQRPGAI-LVFLPGWDTIN 361
+ Y + + + PE+ N F L + + P + L+ P D IN
Sbjct: 503 PGKCYRLYSREDFHKFEAENMPEILRCNLSATFLELMKL-GMKNPHRLKLIDPPETDNIN 561
Query: 362 S 362
+
Sbjct: 562 A 562
Score = 46 (21.3 bits), Expect = 1.4e-13, Sum P(3) = 1.4e-13
Identities = 9/33 (27%), Positives = 19/33 (57%)
Query: 52 ARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
+R +LP + ++ + + + ++ GETGSG
Sbjct: 157 SRPQLPIDAVEQQLMYELASQETLIVIGETGSG 189
Score = 40 (19.1 bits), Expect = 1.4e-13, Sum P(3) = 1.4e-13
Identities = 13/54 (24%), Positives = 23/54 (42%)
Query: 361 NSLHRSMCQSSFFNSCLLYEFAMVDNKPKEIITVRDCLSFE-CKPSTAKIIKEL 413
N R C + N L +M++ + K+I + ++F C K+ K L
Sbjct: 695 NQTIRKFCNDNMINEQHLKTASMIEEQLKQI-AIEQKVTFSTCGADFMKMRKAL 747
>UNIPROTKB|E1C094 [details] [associations]
symbol:E1C094 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 EMBL:AADN02054197 EMBL:AADN02054196
IPI:IPI00591998 Ensembl:ENSGALT00000001141 Uniprot:E1C094
Length = 1164
Score = 171 (65.3 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 34/86 (39%), Positives = 53/86 (61%)
Query: 189 ILVFLPGWDTINSLHRSMCQ--SSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIV 246
ILVF+PG + I + + + ++P++S LP+ Q IF P+GVRK +
Sbjct: 746 ILVFMPGQEDIEVTSEQIVEHLEELEKAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCI 805
Query: 247 LATNIAETSITIDDIVYVVDCGKTKM 272
+ATNIAETS+T+D I++V+D G K+
Sbjct: 806 VATNIAETSLTVDGIMFVIDSGYCKL 831
Score = 90 (36.7 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 20/61 (32%), Positives = 36/61 (59%)
Query: 33 FKKEMIRKLQSR----RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLH 88
F + M K ++R + + +LE R+ LP + ++ +L ++R+N I ++ GETGSG
Sbjct: 508 FAEHMKEKSEARSEFAKKKSILEQRQYLPIFAVQQELLSILRDNSIVIVVGETGSGKTTQ 567
Query: 89 L 89
L
Sbjct: 568 L 568
>UNIPROTKB|F1NY80 [details] [associations]
symbol:F1NY80 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0071013 "catalytic step
2 spliceosome" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104421 OMA:PSRSTWE
EMBL:AADN02054197 EMBL:AADN02054196 IPI:IPI00821409
Ensembl:ENSGALT00000038723 Uniprot:F1NY80
Length = 1170
Score = 171 (65.3 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 34/86 (39%), Positives = 53/86 (61%)
Query: 189 ILVFLPGWDTINSLHRSMCQ--SSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIV 246
ILVF+PG + I + + + ++P++S LP+ Q IF P+GVRK +
Sbjct: 749 ILVFMPGQEDIEVTSEQIVEHLEELEKAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCI 808
Query: 247 LATNIAETSITIDDIVYVVDCGKTKM 272
+ATNIAETS+T+D I++V+D G K+
Sbjct: 809 VATNIAETSLTVDGIMFVIDSGYCKL 834
Score = 90 (36.7 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 20/61 (32%), Positives = 36/61 (59%)
Query: 33 FKKEMIRKLQSR----RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLH 88
F + M K ++R + + +LE R+ LP + ++ +L ++R+N I ++ GETGSG
Sbjct: 511 FAEHMKEKSEARSEFAKKKSILEQRQYLPIFAVQQELLSILRDNSIVIVVGETGSGKTTQ 570
Query: 89 L 89
L
Sbjct: 571 L 571
>FB|FBgn0033160 [details] [associations]
symbol:CG11107 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC;ISS] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AE013599
GO:GO:0005524 GO:GO:0022008 GO:GO:0003676 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0016779 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA EMBL:AY058484 RefSeq:NP_610269.1 UniGene:Dm.4189
SMR:Q7K3M5 STRING:Q7K3M5 EnsemblMetazoa:FBtr0088966 GeneID:35654
KEGG:dme:Dmel_CG11107 UCSC:CG11107-RA FlyBase:FBgn0033160
InParanoid:Q7K3M5 OrthoDB:EOG4D254T GenomeRNAi:35654 NextBio:794560
Uniprot:Q7K3M5
Length = 729
Score = 182 (69.1 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 50/125 (40%), Positives = 71/125 (56%)
Query: 189 ILVFLPGWDTIN-SLHRSMCQSSFFNSS--RFQIIPLHSMLPTVSQKSIFN-TPPEGV-- 242
IL+FL G + I + R + S + IPL+S LP Q+ IF PP
Sbjct: 285 ILMFLTGQEEIEEACKRIKREIDNLGSEIGELKCIPLYSTLPPNLQQRIFEPAPPPNANG 344
Query: 243 ---RKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRG 299
RK+V++TNIAETS+TID +V+V+D G K ++ + + +L IS A+A+QR G
Sbjct: 345 AIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRSG 404
Query: 300 RAGRT 304
RAGRT
Sbjct: 405 RAGRT 409
Score = 72 (30.4 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 15/42 (35%), Positives = 26/42 (61%)
Query: 43 SRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSG 84
S+RYQ + + R LP ++ + + ++ +Q V+ GETGSG
Sbjct: 59 SQRYQNLYKKRIALPVFEYQADFMRLLSLHQCIVLVGETGSG 100
>FB|FBgn0001330 [details] [associations]
symbol:kz "kurz" species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS;NAS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0004386 "helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0022008 EMBL:AE014298
GO:GO:0003723 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AL009195 GeneTree:ENSGT00550000074985 KO:K14780
OMA:AKLQPRT EMBL:X64418 PIR:T13424 RefSeq:NP_476591.1 UniGene:Dm.33
ProteinModelPortal:O46072 SMR:O46072 STRING:O46072 PaxDb:O46072
PRIDE:O46072 EnsemblMetazoa:FBtr0070419 GeneID:31205
KEGG:dme:Dmel_CG3228 UCSC:CG3228-RA CTD:31205 FlyBase:FBgn0001330
InParanoid:O46072 OrthoDB:EOG4SN03P PhylomeDB:O46072
GenomeRNAi:31205 NextBio:772445 Bgee:O46072 GermOnline:CG3228
Uniprot:O46072
Length = 1192
Score = 185 (70.2 bits), Expect = 2.4e-13, Sum P(3) = 2.4e-13
Identities = 38/85 (44%), Positives = 54/85 (63%)
Query: 219 IIPLHSMLPTVSQKSIFNTPPEGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVK 278
++PL+S+L + Q IF P+G R V++TN+AETS+TI I YVVDCG+ K +D
Sbjct: 619 VLPLYSLLSSEKQNRIFLPVPDGCRLCVVSTNVAETSLTIPHIKYVVDCGRQKTRLYDKL 678
Query: 279 DNIATLKPEWISLANAKQRRGRAGR 303
++ + S A+A QR GRAGR
Sbjct: 679 TGVSAFVVTYTSKASADQRAGRAGR 703
Score = 78 (32.5 bits), Expect = 2.4e-13, Sum P(3) = 2.4e-13
Identities = 16/45 (35%), Positives = 24/45 (53%)
Query: 45 RYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLHL 89
R E+ AR +LP V++ + N I +++GETGSG L
Sbjct: 249 RTTEVQNARLRLPILAEEQQVMETINENPIVIVAGETGSGKTTQL 293
Score = 38 (18.4 bits), Expect = 2.4e-13, Sum P(3) = 2.4e-13
Identities = 9/36 (25%), Positives = 19/36 (52%)
Query: 171 ANSPKRWVKLLRSMLVVPILVFLPGWDTINSLHRSM 206
A + ++ +K+ + IL+F+ G +N L R +
Sbjct: 460 AEAYRKTLKIHNKLPEGGILIFVTGQQEVNQLVRKL 495
>UNIPROTKB|Q5JP46 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AL845353 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOVERGEN:HBG039428 UniGene:Hs.485060
HGNC:HGNC:2739 IPI:IPI00292510 SMR:Q5JP46 Ensembl:ENST00000383576
UCSC:uc011ijt.2 Uniprot:Q5JP46
Length = 560
Score = 202 (76.2 bits), Expect = 4.5e-13, P = 4.5e-13
Identities = 46/118 (38%), Positives = 70/118 (59%)
Query: 189 ILVFLPGWDTINS---LHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVFL G + I + + + C+ ++P+++ LP+ Q IF P G RK+
Sbjct: 130 ILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKV 189
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
V+ATNIAETS+TI+ I+YV+D G K +++ + + +L S A+A QR GRAGR
Sbjct: 190 VVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGR 247
>UNIPROTKB|Q5SQH5 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:CH471081 GO:GO:0003676 EMBL:BX119957 EMBL:CR753328
EMBL:CR759778 EMBL:AL732442 EMBL:BX908728 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
UniGene:Hs.485060 HGNC:HGNC:2739 EMBL:CR788240 EMBL:AL662798
EMBL:CU013522 IPI:IPI00644906 SMR:Q5SQH5 Ensembl:ENST00000376437
Ensembl:ENST00000414052 Ensembl:ENST00000445379
Ensembl:ENST00000449861 Ensembl:ENST00000451748
Ensembl:ENST00000453879 UCSC:uc003nqy.3 Uniprot:Q5SQH5
Length = 560
Score = 202 (76.2 bits), Expect = 4.5e-13, P = 4.5e-13
Identities = 46/118 (38%), Positives = 70/118 (59%)
Query: 189 ILVFLPGWDTINS---LHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKI 245
ILVFL G + I + + + C+ ++P+++ LP+ Q IF P G RK+
Sbjct: 130 ILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKV 189
Query: 246 VLATNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGR 303
V+ATNIAETS+TI+ I+YV+D G K +++ + + +L S A+A QR GRAGR
Sbjct: 190 VVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGR 247
>UNIPROTKB|P43329 [details] [associations]
symbol:hrpA species:83333 "Escherichia coli K-12"
[GO:0004386 "helicase activity" evidence=IEA;IMP] [GO:0009451 "RNA
modification" evidence=IMP] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0006397 "mRNA processing"
evidence=IMP] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006397 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:D42105
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GO:GO:0009451 PIR:H64892 RefSeq:NP_415931.4 RefSeq:YP_489680.1
ProteinModelPortal:P43329 SMR:P43329 DIP:DIP-9937N IntAct:P43329
MINT:MINT-1229564 PRIDE:P43329 EnsemblBacteria:EBESCT00000000014
EnsemblBacteria:EBESCT00000015011 GeneID:12932513 GeneID:948444
KEGG:ecj:Y75_p1389 KEGG:eco:b1413 PATRIC:32118112 EchoBASE:EB2772
EcoGene:EG12936 HOGENOM:HOG000247272 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 BioCyc:EcoCyc:G6732-MONOMER
BioCyc:ECOL316407:JW5905-MONOMER Genevestigator:P43329
InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967 Uniprot:P43329
Length = 1300
Score = 181 (68.8 bits), Expect = 4.5e-13, Sum P(3) = 4.5e-13
Identities = 48/137 (35%), Positives = 74/137 (54%)
Query: 189 ILVFLPGWDTINSLHRSMCQSSFFNSSRFQIIPLHSMLPTVSQKSIFNTPPEGVRKIVLA 248
IL+F+ G I ++ + N +I+PL++ L Q +F + G R+IVLA
Sbjct: 293 ILIFMSGEREIRDTADALNK---LNLRHTEILPLYARLSNSEQNRVFQSH-SG-RRIVLA 347
Query: 249 TNIAETSITIDDIVYVVDCGKTKMSNFDVKDNIATLKPEWISLANAKQRRGRAGRTLKRS 308
TN+AETS+T+ I YV+D G ++S + + + L E IS A+A QR+GR GR +
Sbjct: 348 TNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGI 407
Query: 309 ETQQYPNDVLNMLKDPE 325
+ Y D + L PE
Sbjct: 408 CIRLYSED--DFLSRPE 422
Score = 82 (33.9 bits), Expect = 4.5e-13, Sum P(3) = 4.5e-13
Identities = 22/82 (26%), Positives = 43/82 (52%)
Query: 22 KLLNDPVLDAAFKKEMIRKLQSRRYQEML-EARK-------KLPSYQMRDAVLDMVRNNQ 73
K + +P A +EM +++ + +L EA + LP Q + +L+ +R++Q
Sbjct: 35 KKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQ 94
Query: 74 ITVISGETGSGPPLHLDFITLK 95
+ +++GETGSG L I ++
Sbjct: 95 VVIVAGETGSGKTTQLPKICME 116
Score = 37 (18.1 bits), Expect = 4.5e-13, Sum P(3) = 4.5e-13
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 409 IIKELRARLDMLLAHKLS 426
I K L+ R+DM +A LS
Sbjct: 1166 INKRLKGRVDMTMALGLS 1183
>TAIR|locus:2142459 [details] [associations]
symbol:AT5G10370 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR002867
InterPro:IPR004087 InterPro:IPR007087 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF01485 Pfam:PF04408 PROSITE:PS00028 PROSITE:PS00690
PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184 SMART:SM00322
SMART:SM00355 SMART:SM00490 SMART:SM00647 SMART:SM00847
Pfam:PF00097 Prosite:PS00518 GO:GO:0005524 EMBL:CP002688
GO:GO:0046872 GO:GO:0008270 GO:GO:0003723 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12818 IPI:IPI00548793
RefSeq:NP_196599.2 UniGene:At.49004 PRIDE:F4KGU4
EnsemblPlants:AT5G10370.1 GeneID:830901 KEGG:ath:AT5G10370
OMA:HQEPEIR ArrayExpress:F4KGU4 Uniprot:F4KGU4
Length = 1775
Score = 190 (71.9 bits), Expect = 6.8e-13, Sum P(3) = 6.8e-13
Identities = 44/114 (38%), Positives = 67/114 (58%)
Query: 220 IPLHSMLPTVSQKSIFNTPPEGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKD 279
+PLH L Q +F P G RK++ ATNIAETS+TI + YV+D G K S ++ +
Sbjct: 552 LPLHGKLSFEEQFRVFQNHP-GRRKVIFATNIAETSLTIPGVKYVIDSGMVKESKYEPRT 610
Query: 280 NIATLKPEWISLANAKQRRGRAGRTLKRSETQQYPN---DVLNMLKDPELEGVN 330
++ LK +S ++A+QR GRAGRT + Y D +N+ ++PE+ V+
Sbjct: 611 GMSILKVCRVSQSSARQRAGRAGRTEPGRCYRLYSKNDFDSMNLNQEPEIRRVH 664
Score = 70 (29.7 bits), Expect = 6.8e-13, Sum P(3) = 6.8e-13
Identities = 20/61 (32%), Positives = 28/61 (45%)
Query: 29 LDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLH 88
L+ A+ I L R + + + LP Y R +L + QI V+ GETGSG
Sbjct: 282 LEGAYDWRRIHCLIRRECRRLEDG---LPIYAYRRQILKKIHREQIMVLIGETGSGKSTQ 338
Query: 89 L 89
L
Sbjct: 339 L 339
Score = 42 (19.8 bits), Expect = 6.8e-13, Sum P(3) = 6.8e-13
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 410 IKELRARLDMLLAHK-LSHPGTT 431
+ E+R L+ LL + ++HPG T
Sbjct: 1394 VAEMRRELEELLRGRPINHPGFT 1416
Score = 39 (18.8 bits), Expect = 1.4e-12, Sum P(3) = 1.4e-12
Identities = 17/78 (21%), Positives = 31/78 (39%)
Query: 368 CQSSFFNSCLLYEF-AMVDNKPKEIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLS 426
C F +CLL +F A + N I C +C ++ ++RA L +L
Sbjct: 1580 CSHLFCKACLLEQFEASMRNFDAFPIL---CSHIDC--GAPIVLADMRALLSQEKLDELF 1634
Query: 427 HPGTTAWGDPNEGNILHC 444
+++ ++G C
Sbjct: 1635 SASLSSFVTSSDGKFRFC 1652
>TAIR|locus:2125211 [details] [associations]
symbol:AT4G01020 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR002867
InterPro:IPR004087 InterPro:IPR007087 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF01485 Pfam:PF04408 PROSITE:PS00028 PROSITE:PS00690
PROSITE:PS50089 PROSITE:PS50157 PROSITE:PS51194 SMART:SM00184
SMART:SM00322 SMART:SM00355 SMART:SM00490 SMART:SM00647
SMART:SM00847 Pfam:PF00097 Prosite:PS00518 GO:GO:0005524
GO:GO:0009507 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0003723 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 HSSP:P38398 GO:GO:0008026
EMBL:AL161491 EMBL:AL080237 KO:K12818 PIR:T10542 IPI:IPI00547897
RefSeq:NP_567206.1 UniGene:At.42970 ProteinModelPortal:P0CE10
SMR:P0CE10 PRIDE:P0CE10 EnsemblPlants:AT4G01020.1 GeneID:826439
KEGG:ath:AT4G01020 GeneFarm:1806 TAIR:At4g01020
HOGENOM:HOG000084497 PhylomeDB:P0CE10 Uniprot:P0CE10
Length = 1787
Score = 190 (71.9 bits), Expect = 7.0e-13, Sum P(3) = 7.0e-13
Identities = 44/114 (38%), Positives = 67/114 (58%)
Query: 220 IPLHSMLPTVSQKSIFNTPPEGVRKIVLATNIAETSITIDDIVYVVDCGKTKMSNFDVKD 279
+PLH L Q +F P G RK++ ATNIAETS+TI + YV+D G K S ++ +
Sbjct: 549 LPLHGKLSFEEQFMVFQNYP-GRRKVIFATNIAETSLTIPGVKYVIDSGMVKESKYEPRT 607
Query: 280 NIATLKPEWISLANAKQRRGRAGRTLKRSETQQYPN---DVLNMLKDPELEGVN 330
++ LK +S ++A+QR GRAGRT + Y D +N+ ++PE+ V+
Sbjct: 608 GMSILKVCQVSQSSARQRAGRAGRTEPGRCYRLYSKTDFDSMNLNQEPEIRRVH 661
Score = 67 (28.6 bits), Expect = 7.0e-13, Sum P(3) = 7.0e-13
Identities = 20/61 (32%), Positives = 28/61 (45%)
Query: 29 LDAAFKKEMIRKLQSRRYQEMLEARKKLPSYQMRDAVLDMVRNNQITVISGETGSGPPLH 88
L+ A+ I L R + + + LP Y R +L + QI V+ GETGSG
Sbjct: 279 LEGAYDWRRIHYLILRECRRLEDG---LPIYAYRRQILKKIHCEQIMVLIGETGSGKSTQ 335
Query: 89 L 89
L
Sbjct: 336 L 336
Score = 45 (20.9 bits), Expect = 7.0e-13, Sum P(3) = 7.0e-13
Identities = 18/78 (23%), Positives = 32/78 (41%)
Query: 368 CQSSFFNSCLLYEF-AMVDNKPKEIITVRDCLSFECKPSTAKIIKELRARLDMLLAHKLS 426
C F +CLL +F A + N I C +C ++ ++RA L +L
Sbjct: 1577 CSHLFCKACLLEQFEASMRNFDAFPIL---CSHIDC--GAPIVVADMRALLSQEKLDELI 1631
Query: 427 HPGTTAWGDPNEGNILHC 444
+A+ ++G + C
Sbjct: 1632 SASLSAFVTSSDGKLRFC 1649
WARNING: HSPs involving 35 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.135 0.409 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 455 455 0.00094 118 3 11 22 0.36 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 285
No. of states in DFA: 621 (66 KB)
Total size of DFA: 274 KB (2142 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 38.39u 0.09s 38.48t Elapsed: 00:00:23
Total cpu time: 38.44u 0.09s 38.53t Elapsed: 00:00:24
Start: Thu Aug 15 12:05:37 2013 End: Thu Aug 15 12:06:01 2013
WARNINGS ISSUED: 2