Query psy6097
Match_columns 167
No_of_seqs 109 out of 1155
Neff 8.3
Searched_HMMs 13730
Date Fri Aug 16 17:31:20 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6097.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/6097hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1wpga1 b.82.7.1 (A:125-239) C 99.9 2E-24 1.5E-28 148.6 5.3 80 77-158 2-97 (115)
2 d1wpga4 f.33.1.1 (A:1-124,A:24 98.4 2.1E-07 1.5E-11 76.3 7.8 66 1-66 36-112 (472)
3 d1dgsa2 b.40.4.6 (A:315-400) N 85.8 0.14 9.9E-06 31.4 1.3 25 88-112 46-70 (86)
4 d1dq3a1 b.86.1.2 (A:1-128,A:41 85.2 0.77 5.6E-05 31.2 5.3 34 77-111 100-133 (168)
5 d1vioa2 d.66.1.5 (A:0-57) Pseu 66.6 0.97 7E-05 25.0 1.1 39 67-111 18-56 (58)
6 d1c06a_ d.66.1.2 (A:) Ribosoma 63.0 2.1 0.00015 28.8 2.4 61 67-132 68-135 (159)
7 d1dm9a_ d.66.1.3 (A:) Heat sho 59.6 2.6 0.00019 26.2 2.3 35 69-109 24-58 (104)
8 d1p9ka_ d.66.1.6 (A:) Hypothet 55.5 2.8 0.0002 24.6 1.8 28 80-110 48-75 (79)
9 d2gy9d1 d.66.1.2 (D:2-205) Rib 52.5 2.2 0.00016 29.9 1.1 61 67-132 111-180 (204)
10 d2gpra_ b.84.3.1 (A:) Glucose 50.2 18 0.0013 23.8 5.5 57 96-154 33-110 (154)
11 d2z1ca1 b.40.14.1 (A:2-72) Hyd 49.6 17 0.0013 20.6 4.7 31 77-109 15-48 (71)
12 d1at0a_ b.86.1.1 (A:) Hedgehog 48.0 5.8 0.00042 25.2 2.7 31 77-108 73-104 (145)
13 d1rutx4 g.39.1.3 (X:114-146) L 46.4 6.7 0.00049 18.6 2.0 15 93-108 7-21 (33)
14 d1kska3 d.66.1.5 (A:1-59) Pseu 46.1 4.3 0.00031 22.1 1.5 38 67-110 17-54 (59)
15 d2ftsa2 b.103.1.1 (A:318-498) 45.0 5.8 0.00042 26.8 2.4 35 92-127 83-119 (181)
16 d2f3ga_ b.84.3.1 (A:) Glucose- 45.0 23 0.0017 23.0 5.5 56 97-154 28-104 (150)
17 d2uubd1 d.66.1.2 (D:2-209) Rib 44.3 5.1 0.00037 28.0 2.0 61 67-132 115-184 (208)
18 d2nqra2 b.103.1.1 (A:7-177) Mo 44.1 12 0.00088 24.9 3.9 34 91-125 80-115 (171)
19 d1wu2a2 b.103.1.1 (A:6-180) Mo 44.1 3.6 0.00026 27.8 1.1 34 91-125 86-121 (175)
20 d1gpra_ b.84.3.1 (A:) Glucose 42.9 27 0.002 22.9 5.5 55 97-153 36-111 (158)
21 d2zcwa2 b.82.3.2 (A:6-117) Tra 42.5 4 0.00029 24.8 1.1 42 94-137 4-47 (112)
22 d1uz5a2 b.103.1.1 (A:5-180) Mo 40.7 5.5 0.0004 26.9 1.7 33 92-125 86-120 (176)
23 d1nhpa2 c.3.1.5 (A:120-242) NA 35.7 34 0.0025 20.7 5.0 36 77-117 86-121 (123)
24 d2evra2 d.3.1.16 (A:87-234) Ce 34.8 9.1 0.00066 25.0 2.0 19 88-107 67-85 (148)
25 d2dsma1 d.372.1.1 (A:1-64) Hyp 33.5 11 0.00078 20.9 1.8 20 90-110 24-43 (64)
26 g1dgw.1 b.82.1.2 (X:,Y:) Seed 32.8 23 0.0017 23.1 3.9 17 92-109 82-98 (168)
27 d2q07a1 b.122.1.1 (A:460-527) 31.5 13 0.00093 20.9 2.0 27 79-109 13-39 (68)
28 d1d7ya2 c.3.1.5 (A:116-236) NA 31.3 19 0.0014 22.1 3.1 32 78-117 87-118 (121)
29 d3d3ra1 b.40.14.1 (A:1-76) Hyd 30.7 31 0.0023 19.7 3.7 30 77-108 18-51 (76)
30 d1uija1 b.82.1.2 (A:6-175) See 29.8 24 0.0017 23.2 3.5 17 93-110 88-104 (170)
31 d1o9ya_ b.139.1.1 (A:) Structu 29.6 15 0.0011 20.4 2.2 12 92-103 23-34 (71)
32 d1vcta2 d.286.1.1 (A:108-201) 29.1 30 0.0022 20.0 3.7 24 79-103 47-72 (94)
33 d1rl2a2 b.40.4.5 (A:60-125) N- 29.0 38 0.0028 18.8 3.8 25 79-103 33-58 (66)
34 d1zrra1 b.82.1.6 (A:1-179) Aci 28.8 25 0.0018 23.6 3.5 15 94-109 125-139 (179)
35 d1iz6a1 b.34.5.2 (A:2-70) Euka 27.0 22 0.0016 19.8 2.6 19 85-103 1-19 (69)
36 d1uika2 b.82.1.2 (A:351-535) S 26.1 30 0.0022 22.9 3.6 17 92-109 101-117 (185)
37 d2phla1 b.82.1.2 (A:11-210) Se 25.0 36 0.0026 22.9 3.9 19 91-110 90-108 (200)
38 d2phla2 b.82.1.2 (A:220-381) S 23.4 24 0.0018 23.0 2.6 17 92-109 72-88 (162)
39 d1nppa2 b.34.5.4 (A:191-248) N 22.1 23 0.0016 19.1 1.8 22 94-116 4-25 (58)
40 d2zjra2 b.40.4.5 (A:33-127) N- 21.8 59 0.0043 19.3 3.9 21 83-103 66-87 (95)
41 d1q1ra2 c.3.1.5 (A:115-247) Pu 21.6 30 0.0022 21.4 2.7 17 100-117 114-130 (133)
42 d1feca2 c.3.1.5 (A:170-286) Tr 21.1 78 0.0057 18.5 6.4 38 77-117 76-113 (117)
43 d1dzfa2 d.78.1.1 (A:144-215) E 20.2 27 0.002 19.7 2.0 15 92-106 44-58 (72)
No 1
>d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=99.89 E-value=2e-24 Score=148.63 Aligned_cols=80 Identities=26% Similarity=0.373 Sum_probs=70.5
Q ss_pred eEEEEecCCe--eEEeeCCCcCCCcEEEEccCCcEEeeeEEEEee---EEEEeCCcccCCCccccccC-----------C
Q psy6097 77 KVTVKRSKGL--YEEVPTTHLVPGDIIVIPKHGCTLACDATLLQG---NCIVNESMLTVHGALFIMWE-----------D 140 (167)
Q Consensus 77 ~~~V~r~~g~--~~~i~~~~lv~GDii~v~~~g~~iP~D~~vl~g---~~~Vdes~ltGEs~p~~k~~-----------~ 140 (167)
.++|+|+ |+ .++|++++|+|||+|.+ ++|+++||||+++++ ++.||||+||||+.|+.|.. +
T Consensus 2 ~~kV~R~-g~~~v~~I~~~eLv~GDiv~l-~~G~~vPaD~~ll~~~~~~l~vdes~lTGEs~pv~K~~~~~~~~~~~~~~ 79 (115)
T d1wpga1 2 MGKVYRA-DRKSVQRIKARDIVPGDIVEV-AVGDKVPADIRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQD 79 (115)
T ss_dssp EEEEEBS-SCSSCEEEEGGGCCTTCEEEE-ETTCBCCSEEEEEEECSSCCEEECHHHHSCCSCEECCCSCCCCTTCCGGG
T ss_pred ceEEEEC-CCceEEEEeHHHCCCCCEEEE-CCCCEEeeceEEEEeeccceEEEEeecccceEEEEeeccccccccccccc
Confidence 5789999 65 36899999999999999 899999999999964 48899999999999999831 3
Q ss_pred CcCEEeeccEEEEEEeeC
Q psy6097 141 VNHTLYCGTVILQARYHG 158 (167)
Q Consensus 141 ~~~~v~aGt~v~~g~~~~ 158 (167)
+.|++|+||.+.+|++++
T Consensus 80 ~~n~lf~GT~V~~G~~~~ 97 (115)
T d1wpga1 80 KKNMLFSGTNIAAGKALG 97 (115)
T ss_dssp CTTEECTTCEEEECEEEE
T ss_pred ccceEEeccEEEeeeEEE
Confidence 568899999999999864
No 2
>d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=98.44 E-value=2.1e-07 Score=76.33 Aligned_cols=66 Identities=18% Similarity=0.303 Sum_probs=59.3
Q ss_pred CCCCccCCC-CCCHHHHHHHHhhhHHHHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHHHHH
Q psy6097 1 YGKNEINVP-IQNISSLFVLEALNPFYIFQVFTLCVWFAEAY----------YYYTGAIICMSVFGIVSSVIQTRQK 66 (167)
Q Consensus 1 yG~N~i~~~-~~s~~~~~~~~~~~~~~i~~~~~~~~~~~~~~----------~~~~~~i~~~~~~~~~~~~~~~~~~ 66 (167)
||+|+++.+ ++|+|+++++++++|+.+++++++++++..+. +..+++++++++++...+++||+|+
T Consensus 36 ~G~N~l~~~~~~s~~~~~~~~~~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~I~~vv~~n~~i~~~qe~~a 112 (472)
T d1wpga4 36 YGHNELPAEEGKSLWELVIEQFEDLLVRILLLAACISFVLAWFEEGEETITAFVEPFVILLILIANAIVGVWQERNA 112 (472)
T ss_dssp SCCSSCCCCCCCCHHHHHHHHTCSHHHHHHHHHHHHHHHHHHTSCTTSTTSSSHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred cCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcccccchhHhHhhhhhheeeeeeeEEeEEechH
Confidence 899999875 58999999999999999999999999987663 5678889999999999999999998
No 3
>d1dgsa2 b.40.4.6 (A:315-400) NAD+-dependent DNA ligase {Thermus filiformis [TaxId: 276]}
Probab=85.82 E-value=0.14 Score=31.44 Aligned_cols=25 Identities=16% Similarity=0.279 Sum_probs=21.3
Q ss_pred EEeeCCCcCCCcEEEEccCCcEEee
Q psy6097 88 EEVPTTHLVPGDIIVIPKHGCTLAC 112 (167)
Q Consensus 88 ~~i~~~~lv~GDii~v~~~g~~iP~ 112 (167)
..+...+|.+||.|.+.++||.||-
T Consensus 46 ~~i~~~~i~~Gd~V~i~raGdVIP~ 70 (86)
T d1dgsa2 46 SYIEELDIRIGDWVLVHKAGGVIPE 70 (86)
T ss_dssp HHHHHTTCBSSCEEEEEEETTTEEE
T ss_pred HHHhhcCCCcCceEEEEECCCCccc
Confidence 3456789999999999889999993
No 4
>d1dq3a1 b.86.1.2 (A:1-128,A:415-454) PI-Pfui intein {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=85.23 E-value=0.77 Score=31.16 Aligned_cols=34 Identities=21% Similarity=0.143 Sum_probs=26.4
Q ss_pred eEEEEecCCeeEEeeCCCcCCCcEEEEccCCcEEe
Q psy6097 77 KVTVKRSKGLYEEVPTTHLVPGDIIVIPKHGCTLA 111 (167)
Q Consensus 77 ~~~V~r~~g~~~~i~~~~lv~GDii~v~~~g~~iP 111 (167)
+..+.+++|+++++++++|.+||.+.- ..+...+
T Consensus 100 p~~v~~~~~~~~~~~a~~L~~GD~l~~-~~~~~~v 133 (168)
T d1dq3a1 100 PFFVLTPDFKIVEKRADELKEGDILIG-GMGLEVV 133 (168)
T ss_dssp EEEEECTTSCEEEEETTTCCTTCEECB-CCHCEEE
T ss_pred eEEEecCCCeEEEEEcccCCCCCEEEe-cCcceeE
Confidence 455666557888999999999999988 5666553
No 5
>d1vioa2 d.66.1.5 (A:0-57) Pseudouridine synthase RsuA N-terminal domain {Haemophilus influenzae [TaxId: 727]}
Probab=66.56 E-value=0.97 Score=24.98 Aligned_cols=39 Identities=13% Similarity=0.120 Sum_probs=28.0
Q ss_pred HHhhhhcCCCeEEEEecCCeeEEeeCCCcCCCcEEEEccCCcEEe
Q psy6097 67 SLHDTVNTVDKVTVKRSKGLYEEVPTTHLVPGDIIVIPKHGCTLA 111 (167)
Q Consensus 67 ~l~~~~~~~~~~~V~r~~g~~~~i~~~~lv~GDii~v~~~g~~iP 111 (167)
+.+++.... .++ -| |+...-+..++.+||.|.+ .|+.+|
T Consensus 18 ~a~~lI~~g-~V~--Vn-g~~v~~~~~~v~~~d~I~~--~g~~l~ 56 (58)
T d1vioa2 18 QATKAIRQS-AVK--IN-GEIVKSGSVQISQEDEIYF--EDELLT 56 (58)
T ss_dssp HHHHHHHTT-CEE--ET-TEECCCTTCEECTTSCEEE--TTEECC
T ss_pred HHHHHHHcC-eEE--EC-CEEeCCCCCCCCCCCEEEE--CCEEcc
Confidence 445555553 444 46 8877778899999999999 487765
No 6
>d1c06a_ d.66.1.2 (A:) Ribosomal protein S4 {Bacillus stearothermophilus [TaxId: 1422]}
Probab=63.01 E-value=2.1 Score=28.84 Aligned_cols=61 Identities=13% Similarity=0.201 Sum_probs=37.8
Q ss_pred HHhhhhcCCCeEEEEecCCeeEEeeCCCcCCCcEEEEccCCcE-Ee-eeEEE-----EeeEEEEeCCcccCCC
Q psy6097 67 SLHDTVNTVDKVTVKRSKGLYEEVPTTHLVPGDIIVIPKHGCT-LA-CDATL-----LQGNCIVNESMLTVHG 132 (167)
Q Consensus 67 ~l~~~~~~~~~~~V~r~~g~~~~i~~~~lv~GDii~v~~~g~~-iP-~D~~v-----l~g~~~Vdes~ltGEs 132 (167)
+-++++... .+.-| |+.+.+|+-.+.|||+|.+ ++... .| ....+ +-.-+.+|...++|.-
T Consensus 68 ~arQ~v~Hg---hi~vN-gk~v~iPSy~vk~GDvIsv-keksk~~~~v~~~~~~~~~~P~wL~vD~~~l~g~v 135 (159)
T d1c06a_ 68 QARQLVTHG---HILVD-GSRVNIPSYRVKPGQTIAV-REKSRNLQVIKEALEANNYIPDYLSFDPEKMEGTY 135 (159)
T ss_dssp HHHHHHHTS---CEEET-TEECCCSSCCCCSSCEEEE-CGGGSSCHHHHHHTTCCCCCCSSEEEETTTTEEEE
T ss_pred HHHHHHHhc---ceEcc-ceEEEecceeecCCcEEee-ccccchHHHHHHHHHccCCCCCEEEEEcccCEEEE
Confidence 344555554 34457 9999999999999999999 74322 11 00000 0123677777777763
No 7
>d1dm9a_ d.66.1.3 (A:) Heat shock protein 15 kD {Escherichia coli [TaxId: 562]}
Probab=59.57 E-value=2.6 Score=26.19 Aligned_cols=35 Identities=14% Similarity=0.273 Sum_probs=23.6
Q ss_pred hhhhcCCCeEEEEecCCeeEEeeCCCcCCCcEEEEccCCcE
Q psy6097 69 HDTVNTVDKVTVKRSKGLYEEVPTTHLVPGDIIVIPKHGCT 109 (167)
Q Consensus 69 ~~~~~~~~~~~V~r~~g~~~~i~~~~lv~GDii~v~~~g~~ 109 (167)
+++.... .+.| | |+.. -++.++.+||+|.+ ..+..
T Consensus 24 ~~~i~~G-~V~v--N-g~~v-Kps~~vk~GDvI~i-~~~~~ 58 (104)
T d1dm9a_ 24 REMIEGG-KVHY--N-GQRS-KPSKIVELNATLTL-RQGND 58 (104)
T ss_dssp HHHHHTT-CEEE--T-TEEC-CTTCBCCTTCEEEE-EETTE
T ss_pred HHHHHcC-Ceee--C-Ceec-cccccCCCCCEEEE-EeCCe
Confidence 3444443 4443 6 8765 47999999999999 55543
No 8
>d1p9ka_ d.66.1.6 (A:) Hypothetical protein YbcJ {Escherichia coli [TaxId: 562]}
Probab=55.53 E-value=2.8 Score=24.62 Aligned_cols=28 Identities=25% Similarity=0.412 Sum_probs=22.5
Q ss_pred EEecCCeeEEeeCCCcCCCcEEEEccCCcEE
Q psy6097 80 VKRSKGLYEEVPTTHLVPGDIIVIPKHGCTL 110 (167)
Q Consensus 80 V~r~~g~~~~i~~~~lv~GDii~v~~~g~~i 110 (167)
|.-| |+...-+...+.+||+|.+ .|+.+
T Consensus 48 V~VN-G~~~~~p~~~V~~~d~I~v--dG~~i 75 (79)
T d1p9ka_ 48 VKVD-GAVETRKRCKIVAGQTVSF--AGHSV 75 (79)
T ss_dssp HEET-TBCCCCSSCCCCSSEEEEE--TTEEE
T ss_pred cccC-CEEeccccccCCCCCEEEE--CCEEE
Confidence 4446 8888889999999999999 47664
No 9
>d2gy9d1 d.66.1.2 (D:2-205) Ribosomal protein S4 {Escherichia coli [TaxId: 562]}
Probab=52.52 E-value=2.2 Score=29.91 Aligned_cols=61 Identities=11% Similarity=0.117 Sum_probs=39.7
Q ss_pred HHhhhhcCCCeEEEEecCCeeEEeeCCCcCCCcEEEEccCCcE-Ee-eeE-------EEEeeEEEEeCCcccCCC
Q psy6097 67 SLHDTVNTVDKVTVKRSKGLYEEVPTTHLVPGDIIVIPKHGCT-LA-CDA-------TLLQGNCIVNESMLTVHG 132 (167)
Q Consensus 67 ~l~~~~~~~~~~~V~r~~g~~~~i~~~~lv~GDii~v~~~g~~-iP-~D~-------~vl~g~~~Vdes~ltGEs 132 (167)
+-++++... .+. -| |+.+.|++-.+.|||+|.+ ++... .| +.. .-+-.-+.+|...++|.-
T Consensus 111 ~ARQ~v~Hg-hi~--VN-gk~VnIPSy~vk~GDvIsv-keksk~~~~i~~~~e~~~~~~~P~wLevd~~~l~g~v 180 (204)
T d2gy9d1 111 EARQLVSHK-AIM--VN-GRVVNIASYQVSPNDVVSI-REKAKKQSRVKAALELAEQREKPTWLEVDAGKMEGTF 180 (204)
T ss_dssp HHHHHHHTT-CEE--ES-SSBCCCTTCBCCTTCBEEE-CTTGGGCHHHHHHHHHHTTCCCCTTEEEETTTTEEEE
T ss_pred HHHHHHHhc-cee--cC-CEEEEeccEeecCCCEEEe-ccchhHHHHHHHHHHhcccCCCCCeEEEecccCEEEE
Confidence 445566664 443 46 9999999999999999999 76433 22 100 001123788888888863
No 10
>d2gpra_ b.84.3.1 (A:) Glucose permease IIa domain, IIa-glc {Mycoplasma capricolum [TaxId: 2095]}
Probab=50.22 E-value=18 Score=23.80 Aligned_cols=57 Identities=14% Similarity=0.219 Sum_probs=38.2
Q ss_pred CCCcEEEEccCCcEE--eeeEEEE--------------ee-E----EEEeCCcccCCCccccccCCCcCEEeeccEEEEE
Q psy6097 96 VPGDIIVIPKHGCTL--ACDATLL--------------QG-N----CIVNESMLTVHGALFIMWEDVNHTLYCGTVILQA 154 (167)
Q Consensus 96 v~GDii~v~~~g~~i--P~D~~vl--------------~g-~----~~Vdes~ltGEs~p~~k~~~~~~~v~aGt~v~~g 154 (167)
..||=+.+.+.+..+ ||||.+. +| . +=+|+..|.||-.-... +.|+.|-+|..+++-
T Consensus 33 ~~G~G~aI~P~~~~v~AP~dG~I~~i~~T~HAigi~t~~G~eiLIHiGidTV~L~G~gF~~~v--~~Gd~V~~G~~L~~~ 110 (154)
T d2gpra_ 33 MLGDGFAINPKSNDFHAPVSGKLVTAFPTKHAFGIQTKSGVEILLHIGLDTVSLDGNGFESFV--TQDQEVNAGDKLVTV 110 (154)
T ss_dssp SSCEEEEEEESSSEEECSSCEEEEECCTTCSEEEEECTTSCEEEEECSSSGGGGTTCSEEECC--CTTCEECTTCEEEEE
T ss_pred CCcCeEEEEecCCEEEEecCeEEEEECCCCcEEEEEeCCCCEEEEEEcccccccCCceeEEEe--cCCCEEcCCCEEEEE
Confidence 456766663334443 9999997 22 2 23478888888665544 788999999888764
No 11
>d2z1ca1 b.40.14.1 (A:2-72) Hydrogenase expression/formation protein HypC {Thermococcus kodakaraensis [TaxId: 311400]}
Probab=49.61 E-value=17 Score=20.58 Aligned_cols=31 Identities=26% Similarity=0.456 Sum_probs=23.5
Q ss_pred eEEEEecCCeeEEee---CCCcCCCcEEEEccCCcE
Q psy6097 77 KVTVKRSKGLYEEVP---TTHLVPGDIIVIPKHGCT 109 (167)
Q Consensus 77 ~~~V~r~~g~~~~i~---~~~lv~GDii~v~~~g~~ 109 (167)
.++|-.. |..++++ ..+..|||-+.+ +.|--
T Consensus 15 ~A~vd~~-G~~r~v~l~lv~e~~vGDyVLV-h~G~A 48 (71)
T d2z1ca1 15 VAVVDFG-GVKREVRLDLMPDTKPGDWVIV-HTGFA 48 (71)
T ss_dssp EEEEEET-TEEEEEECTTSTTCCTTCEEEE-ETTEE
T ss_pred EEEEEcC-CeEEEEEEEeeCCCCCCCEEEE-eechh
Confidence 5666666 7777776 467899999999 88843
No 12
>d1at0a_ b.86.1.1 (A:) Hedgehog {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=47.99 E-value=5.8 Score=25.15 Aligned_cols=31 Identities=10% Similarity=0.033 Sum_probs=22.6
Q ss_pred eEEEEec-CCeeEEeeCCCcCCCcEEEEccCCc
Q psy6097 77 KVTVKRS-KGLYEEVPTTHLVPGDIIVIPKHGC 108 (167)
Q Consensus 77 ~~~V~r~-~g~~~~i~~~~lv~GDii~v~~~g~ 108 (167)
...+.++ ++....+.+++|.+||.+.+ ..++
T Consensus 73 ~~~v~~~~~~~~~~v~a~~l~~GD~l~~-~~~~ 104 (145)
T d1at0a_ 73 LVSVWQPESQKLTFVFADRIEEKNQVLV-RDVE 104 (145)
T ss_dssp EEEEEETTTTEEEEEEGGGCCTTCEEEE-ECTT
T ss_pred eEEEEcCCCCceeEEEeeeecCCCEEEE-EcCC
Confidence 4444442 25677899999999999999 6654
No 13
>d1rutx4 g.39.1.3 (X:114-146) LIM only 4 (Lmo4) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=46.41 E-value=6.7 Score=18.63 Aligned_cols=15 Identities=40% Similarity=0.647 Sum_probs=11.7
Q ss_pred CCcCCCcEEEEccCCc
Q psy6097 93 THLVPGDIIVIPKHGC 108 (167)
Q Consensus 93 ~~lv~GDii~v~~~g~ 108 (167)
..|||||..-. -+|.
T Consensus 7 n~LVPGDRFHy-vNG~ 21 (33)
T d1rutx4 7 NRLVPGDRFHY-INGS 21 (33)
T ss_dssp CBCCTTCEEEE-ETTE
T ss_pred ccccCCceeEE-ecCE
Confidence 46899999988 6664
No 14
>d1kska3 d.66.1.5 (A:1-59) Pseudouridine synthase RsuA N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=46.14 E-value=4.3 Score=22.12 Aligned_cols=38 Identities=18% Similarity=0.196 Sum_probs=26.3
Q ss_pred HHhhhhcCCCeEEEEecCCeeEEeeCCCcCCCcEEEEccCCcEE
Q psy6097 67 SLHDTVNTVDKVTVKRSKGLYEEVPTTHLVPGDIIVIPKHGCTL 110 (167)
Q Consensus 67 ~l~~~~~~~~~~~V~r~~g~~~~i~~~~lv~GDii~v~~~g~~i 110 (167)
+.++++... .++ -| |+.+.-+...+.|||.|.+ .|+.+
T Consensus 17 ~a~~lI~~g-~V~--Vn-g~~v~~~~~~V~~~d~I~~--dg~~l 54 (59)
T d1kska3 17 IAGREIRGN-RVT--VD-GEIVRNAAFKLLPEHDVAY--DGNPL 54 (59)
T ss_dssp HHHHHHHTT-CEE--ET-TEECCCTTCEECTTCCEEE--TTEEE
T ss_pred HHHHHHHcC-cEE--EC-CEEeecCCcCcCCCCEEEE--CCEEe
Confidence 444555553 444 46 8888888889999999999 46654
No 15
>d2ftsa2 b.103.1.1 (A:318-498) Gephyrin, domains 3 and 4 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=45.04 E-value=5.8 Score=26.80 Aligned_cols=35 Identities=17% Similarity=0.384 Sum_probs=28.6
Q ss_pred CCCcCCCcEEEEccCCcEEe--eeEEEEeeEEEEeCCc
Q psy6097 92 TTHLVPGDIIVIPKHGCTLA--CDATLLQGNCIVNESM 127 (167)
Q Consensus 92 ~~~lv~GDii~v~~~g~~iP--~D~~vl~g~~~Vdes~ 127 (167)
...+.+|+-+.| .-|..+| ||++|-.-++.+.+..
T Consensus 83 ~~~l~~g~av~I-~TGa~lP~gaDaVV~~E~~~~~~~~ 119 (181)
T d2ftsa2 83 TQTVMPGQVMRV-TTGAPIPCGADAVVQVEDTELIRES 119 (181)
T ss_dssp CCCCCTTEEEEE-CTTCBCCTTCCEEEEGGGEEEEEES
T ss_pred cccccCceEEEc-ccCcccccccceEEEeeeeEEeccc
Confidence 578899999999 8999999 9999986666664433
No 16
>d2f3ga_ b.84.3.1 (A:) Glucose-specific factor III (glsIII) {Escherichia coli [TaxId: 562]}
Probab=45.03 E-value=23 Score=23.02 Aligned_cols=56 Identities=21% Similarity=0.285 Sum_probs=36.3
Q ss_pred CCcEEEEccCCcEE--eeeEEEE--------------ee-E----EEEeCCcccCCCccccccCCCcCEEeeccEEEEE
Q psy6097 97 PGDIIVIPKHGCTL--ACDATLL--------------QG-N----CIVNESMLTVHGALFIMWEDVNHTLYCGTVILQA 154 (167)
Q Consensus 97 ~GDii~v~~~g~~i--P~D~~vl--------------~g-~----~~Vdes~ltGEs~p~~k~~~~~~~v~aGt~v~~g 154 (167)
.||=+.+.+.+..+ ||||.+. +| . .=+|+..|.||-.-... +.|+.|-+|..+++-
T Consensus 28 mG~GvAI~P~~~~v~AP~dG~V~~v~~T~HAigi~t~~G~eiLIHiGidTV~L~G~gF~~~v--~~Gd~V~~G~~L~~~ 104 (150)
T d2f3ga_ 28 VGDGIAIKPTGNKMVAPVDGTIGKIFETNHAFSIESDSGVELFVHFGIDTVELKGEGFKRIA--EEGQRVKVGDTVIEF 104 (150)
T ss_dssp SCEEEEEEECSSEEECSSSEEEEEECTTSSEEEEEETTSCEEEEECSBSGGGGTTTTEEECS--CTTCEECTTCEEEEE
T ss_pred ccCeEEEEeCCCeEEeecCEEEEEECCCCCEEEEEeCCceEEEEEEccchhhcCCcceEEEe--cCCCEECCCCEEEEE
Confidence 35544442233333 8999986 23 2 23588888898765544 788889888887763
No 17
>d2uubd1 d.66.1.2 (D:2-209) Ribosomal protein S4 {Thermus thermophilus [TaxId: 274]}
Probab=44.26 E-value=5.1 Score=28.01 Aligned_cols=61 Identities=15% Similarity=0.166 Sum_probs=38.7
Q ss_pred HHhhhhcCCCeEEEEecCCeeEEeeCCCcCCCcEEEEccCCcE-Ee-eeEEE-------EeeEEEEeCCcccCCC
Q psy6097 67 SLHDTVNTVDKVTVKRSKGLYEEVPTTHLVPGDIIVIPKHGCT-LA-CDATL-------LQGNCIVNESMLTVHG 132 (167)
Q Consensus 67 ~l~~~~~~~~~~~V~r~~g~~~~i~~~~lv~GDii~v~~~g~~-iP-~D~~v-------l~g~~~Vdes~ltGEs 132 (167)
+-++++... . |.-| |+.+.+++-.+.|||+|.+ .+... .+ ....+ +-.-+.+|...++|.-
T Consensus 115 ~ARQ~v~Hg-~--i~vN-g~~v~ips~~~~~gd~I~v-reksk~~~~i~~~le~~~~~~~P~wLevd~~~l~g~v 184 (208)
T d2uubd1 115 QARQLVRHG-H--ITVN-GRRVDLPSYRVRPGDEIAV-AEKSRNLELIRQNLEAMKGRKVGPWLSLDVEGMKGKF 184 (208)
T ss_dssp HHHHHHHTT-C--EEET-TEECCCTTCBCCTTCEEEE-CGGGTTCHHHHHHHHHHTTCCCCTTEEEETTTTEEEE
T ss_pred HHHHHHHhc-C--eecC-CeEEEeccEEecCCceeeh-hhccchHHHHHHHHHhhccCCCCCCeEeecccCEEEE
Confidence 344556554 3 4457 9999999999999999999 65322 11 11000 0123678888888873
No 18
>d2nqra2 b.103.1.1 (A:7-177) Molybdenum cofactor biosynthesis protein MoeA, N-terminal and linker domains {Escherichia coli [TaxId: 562]}
Probab=44.08 E-value=12 Score=24.87 Aligned_cols=34 Identities=21% Similarity=0.319 Sum_probs=26.7
Q ss_pred eCCCcCCCcEEEEccCCcEEe--eeEEEEeeEEEEeC
Q psy6097 91 PTTHLVPGDIIVIPKHGCTLA--CDATLLQGNCIVNE 125 (167)
Q Consensus 91 ~~~~lv~GDii~v~~~g~~iP--~D~~vl~g~~~Vde 125 (167)
....+.+|.-+.+ .-|..+| ||++|-.-++..++
T Consensus 80 ~~~~l~~g~~~~I-~TGa~lP~gaDaVI~~E~~~~~~ 115 (171)
T d2nqra2 80 YHGEWPAGTCIRI-MTGAPVPEGCEAVVMQEQTEQMD 115 (171)
T ss_dssp CCSCCCTTCEEEE-CTTCBCCTTCCEEEEGGGEEECS
T ss_pred CccccccCcceEE-eccccccccccEEEEEcceeccC
Confidence 3567899999999 8999999 99998754454433
No 19
>d1wu2a2 b.103.1.1 (A:6-180) Molybdenum cofactor biosynthesis protein MoeA, N-terminal and linker domains {Pyrococcus horikoshii, PH1647 [TaxId: 53953]}
Probab=44.07 E-value=3.6 Score=27.81 Aligned_cols=34 Identities=15% Similarity=0.269 Sum_probs=26.7
Q ss_pred eCCCcCCCcEEEEccCCcEEe--eeEEEEeeEEEEeC
Q psy6097 91 PTTHLVPGDIIVIPKHGCTLA--CDATLLQGNCIVNE 125 (167)
Q Consensus 91 ~~~~lv~GDii~v~~~g~~iP--~D~~vl~g~~~Vde 125 (167)
....+.+|+-+.+ .-|..+| ||+++-.-++..++
T Consensus 86 ~~~~l~~g~~v~I-~TGa~iP~g~d~VI~~E~~~~~~ 121 (175)
T d1wu2a2 86 AKEEVTTGKAIKV-LTGTRIPKGANAVIMQEMVKREG 121 (175)
T ss_dssp CSSCCCTTEEEEE-CTTCBCCTTCCEEEEGGGSEEET
T ss_pred ccccccCCceEEE-eeccceeeccchheeeeeeecCC
Confidence 3568999999999 8999999 99998754444443
No 20
>d1gpra_ b.84.3.1 (A:) Glucose permease IIa domain, IIa-glc {Bacillus subtilis [TaxId: 1423]}
Probab=42.87 E-value=27 Score=22.92 Aligned_cols=55 Identities=16% Similarity=0.176 Sum_probs=36.6
Q ss_pred CCcEEEEccCCcEE--eeeEEEE--------------ee-E----EEEeCCcccCCCccccccCCCcCEEeeccEEEE
Q psy6097 97 PGDIIVIPKHGCTL--ACDATLL--------------QG-N----CIVNESMLTVHGALFIMWEDVNHTLYCGTVILQ 153 (167)
Q Consensus 97 ~GDii~v~~~g~~i--P~D~~vl--------------~g-~----~~Vdes~ltGEs~p~~k~~~~~~~v~aGt~v~~ 153 (167)
.||=+.+.+.+..+ ||||.+. +| . +=+|+..|.||-.-... +.|+.|-+|..+++
T Consensus 36 ~G~G~aI~P~~~~v~AP~~G~I~~i~~T~HAigi~t~~G~evLiHiGiDTV~L~G~gF~~~v--~~Gd~Vk~G~~L~~ 111 (158)
T d1gpra_ 36 MGDGFAILPSEGIVVSPVRGKILNVFPTKHAIGLQSDGGREILIHFGIDTVSLKGEGFTSFV--SEGDRVEPGQKLLE 111 (158)
T ss_dssp SCEEEEEEESSCEEECSSSEEEEEECTTSSEEEEEETTSCEEEEECSBSCGGGTTTTEEECC--CTTCEECTTCEEEE
T ss_pred ccceEEEEEcCCEEEEeeCeEEEEEcCCCCEEEEEeCCCeEEEEEEeecccccCCcceEEEE--cCCCEEcCCCEEEE
Confidence 46655552334443 8999996 23 2 23588888898765544 77888888887775
No 21
>d2zcwa2 b.82.3.2 (A:6-117) Transcriptional regulator TTHA1359, N-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=42.50 E-value=4 Score=24.80 Aligned_cols=42 Identities=17% Similarity=0.214 Sum_probs=29.1
Q ss_pred CcCCCcEEEEccCCcEEeeeEE--EEeeEEEEeCCcccCCCccccc
Q psy6097 94 HLVPGDIIVIPKHGCTLACDAT--LLQGNCIVNESMLTVHGALFIM 137 (167)
Q Consensus 94 ~lv~GDii~v~~~g~~iP~D~~--vl~g~~~Vdes~ltGEs~p~~k 137 (167)
...+|++|.- .|+.-|+|.+ |++|.+.+-...-+|....+..
T Consensus 4 ~~~~ge~i~~--~Ge~~~~~~~y~i~~G~v~i~~~~~~G~e~~~~~ 47 (112)
T d2zcwa2 4 SFKAGDVILY--PGVPGPRDRAYRVLEGLVRLEAVDEEGNALTLRL 47 (112)
T ss_dssp EECTTCEEEC--SBSCCTTCCCEEEEESCEEEEEECTTSCEEEEEE
T ss_pred EECCCCEEEE--CCCCCCCCEEEEEEEccceEEEeecccccceecc
Confidence 3467888865 6888888877 5688877766666676555533
No 22
>d1uz5a2 b.103.1.1 (A:5-180) Molybdenum cofactor biosynthesis protein MoeA, N-terminal and linker domains {Archaeon Pyrococcus horikoshii, PH0582 [TaxId: 53953]}
Probab=40.74 E-value=5.5 Score=26.87 Aligned_cols=33 Identities=21% Similarity=0.218 Sum_probs=26.3
Q ss_pred CCCcCCCcEEEEccCCcEEe--eeEEEEeeEEEEeC
Q psy6097 92 TTHLVPGDIIVIPKHGCTLA--CDATLLQGNCIVNE 125 (167)
Q Consensus 92 ~~~lv~GDii~v~~~g~~iP--~D~~vl~g~~~Vde 125 (167)
...|.+|+-+.| .-|..+| ||++|-.-++...+
T Consensus 86 ~~~l~~g~~v~I-~TGa~lP~gaD~VI~~E~~~~~~ 120 (176)
T d1uz5a2 86 KFKLGKGEAAYI-STGAMLPGNADAVIQFEDVERVN 120 (176)
T ss_dssp CCBCCTTEEEEE-CTTCBCCBTCCEEEEGGGEEEET
T ss_pred cccccCCceEEe-ecccccccccceEEEEeeeeecC
Confidence 457999999999 8999999 99999754554443
No 23
>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}
Probab=35.74 E-value=34 Score=20.73 Aligned_cols=36 Identities=11% Similarity=0.119 Sum_probs=23.0
Q ss_pred eEEEEecCCeeEEeeCCCcCCCcEEEEccCCcEEeeeEEEE
Q psy6097 77 KVTVKRSKGLYEEVPTTHLVPGDIIVIPKHGCTLACDATLL 117 (167)
Q Consensus 77 ~~~V~r~~g~~~~i~~~~lv~GDii~v~~~g~~iP~D~~vl 117 (167)
.++++.+ -+...+..+. -.. ..+ ..|..+|||.+++
T Consensus 86 gv~~~~~-~~v~~i~~~~--~~~-~v~-~dg~~i~~D~vi~ 121 (123)
T d1nhpa2 86 NITIATG-ETVERYEGDG--RVQ-KVV-TDKNAYDADLVVV 121 (123)
T ss_dssp TEEEEES-CCEEEEECSS--BCC-EEE-ESSCEEECSEEEE
T ss_pred CeEEEeC-ceEEEEEcCC--CEE-EEE-eCCCEEECCEEEE
Confidence 4777777 5555555432 112 236 6899999999886
No 24
>d2evra2 d.3.1.16 (A:87-234) Cell wall-associated hydrolase Spr C-terminal domain {Nostoc punctiforme [TaxId: 272131]}
Probab=34.79 E-value=9.1 Score=25.00 Aligned_cols=19 Identities=21% Similarity=0.524 Sum_probs=15.6
Q ss_pred EEeeCCCcCCCcEEEEccCC
Q psy6097 88 EEVPTTHLVPGDIIVIPKHG 107 (167)
Q Consensus 88 ~~i~~~~lv~GDii~v~~~g 107 (167)
..|+.++++|||+|.. ..+
T Consensus 67 ~~V~~~~l~pGDLvFf-~~~ 85 (148)
T d2evra2 67 QPITIAELVAGDLVFF-GTS 85 (148)
T ss_dssp EEECGGGCCTTCEEEE-ECS
T ss_pred CcccccccCcceeEEe-cCC
Confidence 4678899999999998 543
No 25
>d2dsma1 d.372.1.1 (A:1-64) Hypothetical protein YqaI {Bacillus subtilis [TaxId: 1423]}
Probab=33.49 E-value=11 Score=20.85 Aligned_cols=20 Identities=25% Similarity=0.250 Sum_probs=15.5
Q ss_pred eeCCCcCCCcEEEEccCCcEE
Q psy6097 90 VPTTHLVPGDIIVIPKHGCTL 110 (167)
Q Consensus 90 i~~~~lv~GDii~v~~~g~~i 110 (167)
+.-+++-|||-+.+ .+|+.+
T Consensus 24 ~~Gsev~p~Dd~li-~pGEv~ 43 (64)
T d2dsma1 24 FYGDEVTPVDDYVI-DGGEII 43 (64)
T ss_dssp TTSSCBCTTSCEEE-ETTEEE
T ss_pred hhccccccCCceEE-cCCeee
Confidence 34678899999999 678764
No 26
>g1dgw.1 b.82.1.2 (X:,Y:) Seed storage 7S protein {Jack bean (Canavalia ensiformis), canavalin/vinculin [TaxId: 3823]}
Probab=32.84 E-value=23 Score=23.15 Aligned_cols=17 Identities=41% Similarity=0.569 Sum_probs=13.5
Q ss_pred CCCcCCCcEEEEccCCcE
Q psy6097 92 TTHLVPGDIIVIPKHGCT 109 (167)
Q Consensus 92 ~~~lv~GDii~v~~~g~~ 109 (167)
..+|.+||++.+ ++|-.
T Consensus 82 ~~~l~~Gdv~~i-P~G~~ 98 (168)
T g1dgw.1 82 AATLSEGDIIVI-PSSFP 98 (168)
T ss_dssp EEEECTTCEEEE-CTTCC
T ss_pred EEEeCCCcEEEE-CCCCE
Confidence 346999999999 78843
No 27
>d2q07a1 b.122.1.1 (A:460-527) Uncharacterized protein AF0587 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=31.46 E-value=13 Score=20.94 Aligned_cols=27 Identities=19% Similarity=0.326 Sum_probs=18.0
Q ss_pred EEEecCCeeEEeeCCCcCCCcEEEEccCCcE
Q psy6097 79 TVKRSKGLYEEVPTTHLVPGDIIVIPKHGCT 109 (167)
Q Consensus 79 ~V~r~~g~~~~i~~~~lv~GDii~v~~~g~~ 109 (167)
.++.. | +.-...++++||.+.+ ..|+.
T Consensus 13 ~v~ap-g--I~~~d~~I~~GD~V~V-~~ge~ 39 (68)
T d2q07a1 13 TIFAG-G--VLRADEKIRPNDVVVF-HNSRI 39 (68)
T ss_dssp EEEGG-G--EEEECTTCCTTCEEEE-ECSSC
T ss_pred ccccc-c--hhhhCCCCCCCCEEEE-EeCCE
Confidence 34454 3 3334578999999999 66653
No 28
>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}
Probab=31.32 E-value=19 Score=22.11 Aligned_cols=32 Identities=13% Similarity=0.294 Sum_probs=21.8
Q ss_pred EEEEecCCeeEEeeCCCcCCCcEEEEccCCcEEeeeEEEE
Q psy6097 78 VTVKRSKGLYEEVPTTHLVPGDIIVIPKHGCTLACDATLL 117 (167)
Q Consensus 78 ~~V~r~~g~~~~i~~~~lv~GDii~v~~~g~~iP~D~~vl 117 (167)
++++.+ .....+. .+.+.+ ..|+.+|||.+++
T Consensus 87 V~i~~~-~~v~~~~------~~~v~l-~dg~~i~~D~vi~ 118 (121)
T d1d7ya2 87 VDLRFE-RSVTGSV------DGVVLL-DDGTRIAADMVVV 118 (121)
T ss_dssp CEEEES-CCEEEEE------TTEEEE-TTSCEEECSEEEE
T ss_pred cEEEeC-CEEEEEe------CCEEEE-CCCCEEECCEEEE
Confidence 566665 3333332 246788 7999999999986
No 29
>d3d3ra1 b.40.14.1 (A:1-76) Hydrogenase expression/formation protein HypC {Shewanella oneidensis [TaxId: 70863]}
Probab=30.71 E-value=31 Score=19.68 Aligned_cols=30 Identities=33% Similarity=0.495 Sum_probs=22.1
Q ss_pred eEEEEecCCeeEEee---C-CCcCCCcEEEEccCCc
Q psy6097 77 KVTVKRSKGLYEEVP---T-THLVPGDIIVIPKHGC 108 (167)
Q Consensus 77 ~~~V~r~~g~~~~i~---~-~~lv~GDii~v~~~g~ 108 (167)
.++|=.. |..+++. . .++.|||-|.+ +.|-
T Consensus 18 ~a~vd~~-G~~r~v~l~lv~e~v~vGDyVLV-H~G~ 51 (76)
T d3d3ra1 18 SVTVDTL-GVRRDVSSHLMTEPLAIGDYVLI-HIGF 51 (76)
T ss_dssp EEEEEET-TEEEEEECTTBSSCCCTTCEEEE-EEEE
T ss_pred EEEEECC-CeEEEEEEEeccCCCCCCCEEEE-ecch
Confidence 5666666 8777775 3 34889999999 8773
No 30
>d1uija1 b.82.1.2 (A:6-175) Seed storage 7S protein {Soybean (Glycine max), beta-conglycinin beta subunit [TaxId: 3847]}
Probab=29.77 E-value=24 Score=23.22 Aligned_cols=17 Identities=41% Similarity=0.524 Sum_probs=13.7
Q ss_pred CCcCCCcEEEEccCCcEE
Q psy6097 93 THLVPGDIIVIPKHGCTL 110 (167)
Q Consensus 93 ~~lv~GDii~v~~~g~~i 110 (167)
.++.+||++.+ ++|...
T Consensus 88 ~~l~~GDv~~v-P~G~~h 104 (170)
T d1uija1 88 YNLHPGDAQRI-PAGTTY 104 (170)
T ss_dssp EEECTTEEEEE-CTTCEE
T ss_pred EEecCCcEEEE-CCCCeE
Confidence 36899999999 788654
No 31
>d1o9ya_ b.139.1.1 (A:) Structural protein HrcQ2, C-terminal domain {Pseudomonas syringae [TaxId: 317]}
Probab=29.57 E-value=15 Score=20.37 Aligned_cols=12 Identities=25% Similarity=0.421 Sum_probs=10.3
Q ss_pred CCCcCCCcEEEE
Q psy6097 92 TTHLVPGDIIVI 103 (167)
Q Consensus 92 ~~~lv~GDii~v 103 (167)
-.++.+||++.+
T Consensus 23 l~~L~~G~vl~l 34 (71)
T d1o9ya_ 23 LRRLDAGTILEV 34 (71)
T ss_dssp HHTCCTTCEEEE
T ss_pred HhccCCCCEEEe
Confidence 557889999999
No 32
>d1vcta2 d.286.1.1 (A:108-201) Hypothetical protein PH0236, C-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}
Probab=29.08 E-value=30 Score=20.03 Aligned_cols=24 Identities=21% Similarity=0.364 Sum_probs=17.0
Q ss_pred EEEecCCeeEEee--CCCcCCCcEEEE
Q psy6097 79 TVKRSKGLYEEVP--TTHLVPGDIIVI 103 (167)
Q Consensus 79 ~V~r~~g~~~~i~--~~~lv~GDii~v 103 (167)
-+.|+ |++..-+ ..-|.+||++.+
T Consensus 47 aI~R~-g~~i~~p~~~~~l~~gD~l~v 72 (94)
T d1vcta2 47 AVRRG-KRWIFGPNENFKIRAGDVLIG 72 (94)
T ss_dssp EEEET-TEEEESCCTTCBCCTTCEEEE
T ss_pred EEEEC-CeeecCCCCCCEECCCCEEEE
Confidence 35676 7766533 556889999988
No 33
>d1rl2a2 b.40.4.5 (A:60-125) N-terminal domain of ribosomal protein L2 {Bacillus stearothermophilus [TaxId: 1422]}
Probab=28.97 E-value=38 Score=18.81 Aligned_cols=25 Identities=16% Similarity=0.121 Sum_probs=18.0
Q ss_pred EEEecCCeeEEee-CCCcCCCcEEEE
Q psy6097 79 TVKRSKGLYEEVP-TTHLVPGDIIVI 103 (167)
Q Consensus 79 ~V~r~~g~~~~i~-~~~lv~GDii~v 103 (167)
.|.-.||+...+. ++.|.+||.|.-
T Consensus 33 lv~y~dG~k~YILap~gl~vGd~i~s 58 (66)
T d1rl2a2 33 LINYADGEKRYIIAPKNLKVGMEIMS 58 (66)
T ss_dssp EEEETTSCEEEEECCTTCCTTCEECB
T ss_pred EEEcCCCcEEEEEccCCCCCCCEEEE
Confidence 3443457666654 899999999987
No 34
>d1zrra1 b.82.1.6 (A:1-179) Acireductone dioxygenase {Klebsiella pneumoniae [TaxId: 573]}
Probab=28.81 E-value=25 Score=23.63 Aligned_cols=15 Identities=13% Similarity=0.111 Sum_probs=11.7
Q ss_pred CcCCCcEEEEccCCcE
Q psy6097 94 HLVPGDIIVIPKHGCT 109 (167)
Q Consensus 94 ~lv~GDii~v~~~g~~ 109 (167)
.+.+||+|.| ++|..
T Consensus 125 ~~~~GDli~v-Pag~~ 139 (179)
T d1zrra1 125 LCEKNDLISV-PAHTP 139 (179)
T ss_dssp ECCCSCEEEE-CTTCC
T ss_pred EEcCCCEEEe-CCCCe
Confidence 3789999999 67744
No 35
>d1iz6a1 b.34.5.2 (A:2-70) Eukaryotic initiation translation factor 5a (eIF5a) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=26.98 E-value=22 Score=19.77 Aligned_cols=19 Identities=37% Similarity=0.588 Sum_probs=16.2
Q ss_pred CeeEEeeCCCcCCCcEEEE
Q psy6097 85 GLYEEVPTTHLVPGDIIVI 103 (167)
Q Consensus 85 g~~~~i~~~~lv~GDii~v 103 (167)
|....+.+.+|++|..|.+
T Consensus 1 g~~~~i~~~~lkkG~~i~~ 19 (69)
T d1iz6a1 1 GDKTKVQVSKLKPGRYIII 19 (69)
T ss_dssp CCEEEEEGGGCCTTSEEEE
T ss_pred CCcEEEEHhHccCCCEEEE
Confidence 3457889999999999999
No 36
>d1uika2 b.82.1.2 (A:351-535) Seed storage 7S protein {Soybean (Glycine max), beta-conglycinin alpha prime subunit [TaxId: 3847]}
Probab=26.08 E-value=30 Score=22.93 Aligned_cols=17 Identities=35% Similarity=0.475 Sum_probs=14.0
Q ss_pred CCCcCCCcEEEEccCCcE
Q psy6097 92 TTHLVPGDIIVIPKHGCT 109 (167)
Q Consensus 92 ~~~lv~GDii~v~~~g~~ 109 (167)
..+|++||++.+ ++|-.
T Consensus 101 ~~~l~~GDv~vi-P~G~~ 117 (185)
T d1uika2 101 RAELSEQDIFVI-PAGYP 117 (185)
T ss_dssp EEEECTTCEEEE-CTTCC
T ss_pred EEEecCCcEEEE-CCCCE
Confidence 457999999999 78854
No 37
>d2phla1 b.82.1.2 (A:11-210) Seed storage 7S protein {French bean (Phaseolus vulgaris), phaseolin [TaxId: 3885]}
Probab=25.05 E-value=36 Score=22.94 Aligned_cols=19 Identities=16% Similarity=0.163 Sum_probs=15.3
Q ss_pred eCCCcCCCcEEEEccCCcEE
Q psy6097 91 PTTHLVPGDIIVIPKHGCTL 110 (167)
Q Consensus 91 ~~~~lv~GDii~v~~~g~~i 110 (167)
...++.+||++.+ ++|-..
T Consensus 90 ~~~~l~~GDv~~i-PaG~~~ 108 (200)
T d2phla1 90 TSDNPIFSDHQKI-PAGTIF 108 (200)
T ss_dssp ESSCTTSCSEEEE-CTTCEE
T ss_pred hccCccCCCEEEE-CCCCeE
Confidence 3568999999999 788653
No 38
>d2phla2 b.82.1.2 (A:220-381) Seed storage 7S protein {French bean (Phaseolus vulgaris), phaseolin [TaxId: 3885]}
Probab=23.42 E-value=24 Score=23.01 Aligned_cols=17 Identities=24% Similarity=0.358 Sum_probs=13.6
Q ss_pred CCCcCCCcEEEEccCCcE
Q psy6097 92 TTHLVPGDIIVIPKHGCT 109 (167)
Q Consensus 92 ~~~lv~GDii~v~~~g~~ 109 (167)
..+|.+||++.+ ++|-.
T Consensus 72 ~~~l~~Gdv~vv-P~G~~ 88 (162)
T d2phla2 72 RAELSKDDVFVI-PAAYP 88 (162)
T ss_dssp EEEEETTCEEEE-CTTCC
T ss_pred EeeecCCcEEEE-CCCCE
Confidence 346999999999 78844
No 39
>d1nppa2 b.34.5.4 (A:191-248) N-utilization substance G protein NusG, C-terminal domain {Aquifex aeolicus [TaxId: 63363]}
Probab=22.14 E-value=23 Score=19.06 Aligned_cols=22 Identities=18% Similarity=0.298 Sum_probs=15.0
Q ss_pred CcCCCcEEEEccCCcEEeeeEEE
Q psy6097 94 HLVPGDIIVIPKHGCTLACDATL 116 (167)
Q Consensus 94 ~lv~GDii~v~~~g~~iP~D~~v 116 (167)
+..+||.|.+ ..|-.-=.-|.+
T Consensus 4 df~~Gd~V~I-~~GpF~g~~g~V 25 (58)
T d1nppa2 4 EFEKGDQVRV-IEGPFMNFTGTV 25 (58)
T ss_dssp SCCTTCEEEE-CSSTTTTCEEEE
T ss_pred cccCCCEEEE-cccCCCCCEEEE
Confidence 5789999999 777543334444
No 40
>d2zjra2 b.40.4.5 (A:33-127) N-terminal domain of ribosomal protein L2 {Deinococcus radiodurans [TaxId: 1299]}
Probab=21.81 E-value=59 Score=19.31 Aligned_cols=21 Identities=14% Similarity=0.135 Sum_probs=16.1
Q ss_pred cCCeeEEee-CCCcCCCcEEEE
Q psy6097 83 SKGLYEEVP-TTHLVPGDIIVI 103 (167)
Q Consensus 83 ~~g~~~~i~-~~~lv~GDii~v 103 (167)
.||+...|. ++.+.+||.|..
T Consensus 66 ~dG~k~YILap~glkvGd~I~s 87 (95)
T d2zjra2 66 ADGEKRYILAPEGLTVGATVNA 87 (95)
T ss_dssp TTSCEEEEECBTTCCTTCEEEB
T ss_pred CCCeEEEEEccCCCCCCCEEEE
Confidence 347666555 899999999987
No 41
>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}
Probab=21.62 E-value=30 Score=21.40 Aligned_cols=17 Identities=18% Similarity=0.401 Sum_probs=14.4
Q ss_pred EEEEccCCcEEeeeEEEE
Q psy6097 100 IIVIPKHGCTLACDATLL 117 (167)
Q Consensus 100 ii~v~~~g~~iP~D~~vl 117 (167)
.+.. ..|+.+|||.+++
T Consensus 114 ~v~~-~~G~~i~~D~vi~ 130 (133)
T d1q1ra2 114 AVLC-EDGTRLPADLVIA 130 (133)
T ss_dssp EEEE-TTSCEEECSEEEE
T ss_pred EEEC-CCCCEEECCEEEE
Confidence 4677 7899999999986
No 42
>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}
Probab=21.12 E-value=78 Score=18.53 Aligned_cols=38 Identities=16% Similarity=0.177 Sum_probs=24.1
Q ss_pred eEEEEecCCeeEEeeCCCcCCCcEEEEccCCcEEeeeEEEE
Q psy6097 77 KVTVKRSKGLYEEVPTTHLVPGDIIVIPKHGCTLACDATLL 117 (167)
Q Consensus 77 ~~~V~r~~g~~~~i~~~~lv~GDii~v~~~g~~iP~D~~vl 117 (167)
.++++.+ -+...+...+=- .-.+.. ..|..+|||.+++
T Consensus 76 GI~v~~~-~~v~~i~~~~~g-~~~v~~-~~g~~i~~D~Vi~ 113 (117)
T d1feca2 76 GINVRTH-ENPAKVTKNADG-TRHVVF-ESGAEADYDVVML 113 (117)
T ss_dssp TEEEEET-CCEEEEEECTTS-CEEEEE-TTSCEEEESEEEE
T ss_pred cEEEEcC-CEEEEEEECCCC-EEEEEE-CCCCEEEcCEEEE
Confidence 3777777 555555422110 124777 7999999999986
No 43
>d1dzfa2 d.78.1.1 (A:144-215) Eukaryotic RPB5 C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=20.18 E-value=27 Score=19.69 Aligned_cols=15 Identities=20% Similarity=0.341 Sum_probs=11.4
Q ss_pred CCCcCCCcEEEEccC
Q psy6097 92 TTHLVPGDIIVIPKH 106 (167)
Q Consensus 92 ~~~lv~GDii~v~~~ 106 (167)
.-.+.|||++.+.+.
T Consensus 44 ~~g~~~GdvikI~R~ 58 (72)
T d1dzfa2 44 YLGLKRGEVVKIIRK 58 (72)
T ss_dssp HHTCCTTCEEEEECT
T ss_pred hcCCCCCCEEEEEEc
Confidence 446889999999543
Done!