BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6098
(378 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|383853890|ref|XP_003702455.1| PREDICTED: 26S protease regulatory subunit 8-like [Megachile
rotundata]
Length = 405
Score = 538 bits (1385), Expect = e-150, Method: Compositional matrix adjust.
Identities = 270/309 (87%), Positives = 273/309 (88%), Gaps = 29/309 (9%)
Query: 70 MDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQ 129
M++DE I EGFKPYY+TKIEELQLIVAEK QNLRRLQAQRNELNAKVRMLREELQLLQ
Sbjct: 7 MEIDEKIAKGEGFKPYYITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLREELQLLQ 66
Query: 130 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKIL 189
EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPN RVALRNESYTLHKIL
Sbjct: 67 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNSRVALRNESYTLHKIL 126
Query: 190 PNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVL 249
PNKVDPLVSLMMVEKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELFDALGIAQPKGVL
Sbjct: 127 PNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVL 186
Query: 250 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAH 309
LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA
Sbjct: 187 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA--------- 237
Query: 310 HPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN 369
REHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN
Sbjct: 238 --------------------REHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN 277
Query: 370 QLDGFEATK 378
QLDGFEATK
Sbjct: 278 QLDGFEATK 286
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 51/68 (75%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR S MD
Sbjct: 193 TGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPS----IIFMD 248
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 249 EIDSIGSS 256
>gi|340721148|ref|XP_003398987.1| PREDICTED: 26S protease regulatory subunit 8-like [Bombus
terrestris]
gi|350399415|ref|XP_003485515.1| PREDICTED: 26S protease regulatory subunit 8-like [Bombus
impatiens]
Length = 405
Score = 535 bits (1379), Expect = e-149, Method: Compositional matrix adjust.
Identities = 269/309 (87%), Positives = 273/309 (88%), Gaps = 29/309 (9%)
Query: 70 MDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQ 129
M++DE + EGFKPYY+TKIEELQLIVAEK QNLRRLQAQRNELNAKVRMLREELQLLQ
Sbjct: 7 MEIDEKLIKGEGFKPYYITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLREELQLLQ 66
Query: 130 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKIL 189
EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPN RVALRNESYTLHKIL
Sbjct: 67 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNSRVALRNESYTLHKIL 126
Query: 190 PNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVL 249
PNKVDPLVSLMMVEKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELFDALGIAQPKGVL
Sbjct: 127 PNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVL 186
Query: 250 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAH 309
LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA
Sbjct: 187 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA--------- 237
Query: 310 HPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN 369
REHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN
Sbjct: 238 --------------------REHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN 277
Query: 370 QLDGFEATK 378
QLDGFEATK
Sbjct: 278 QLDGFEATK 286
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 51/68 (75%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR S MD
Sbjct: 193 TGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPS----IIFMD 248
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 249 EIDSIGSS 256
>gi|332030480|gb|EGI70168.1| 26S protease regulatory subunit 8 [Acromyrmex echinatior]
Length = 427
Score = 535 bits (1379), Expect = e-149, Method: Compositional matrix adjust.
Identities = 270/309 (87%), Positives = 272/309 (88%), Gaps = 29/309 (9%)
Query: 70 MDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQ 129
MD+DE EGFKPYY+TKIEELQLIVAEK QNLRRLQAQRNELNAKVRMLREELQLLQ
Sbjct: 29 MDIDEKNAKGEGFKPYYITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLREELQLLQ 88
Query: 130 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKIL 189
EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPN RVALRNESYTLHKIL
Sbjct: 89 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNSRVALRNESYTLHKIL 148
Query: 190 PNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVL 249
PNKVDPLVSLMMVEKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELFDALGIAQPKGVL
Sbjct: 149 PNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVL 208
Query: 250 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAH 309
LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA
Sbjct: 209 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA--------- 259
Query: 310 HPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN 369
REHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN
Sbjct: 260 --------------------REHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN 299
Query: 370 QLDGFEATK 378
QLDGFEATK
Sbjct: 300 QLDGFEATK 308
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 51/68 (75%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR S MD
Sbjct: 215 TGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPS----IIFMD 270
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 271 EIDSIGSS 278
>gi|307212064|gb|EFN87947.1| 26S protease regulatory subunit 8 [Harpegnathos saltator]
Length = 405
Score = 535 bits (1379), Expect = e-149, Method: Compositional matrix adjust.
Identities = 269/309 (87%), Positives = 272/309 (88%), Gaps = 29/309 (9%)
Query: 70 MDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQ 129
MD+DE EGFKPYY+TKIEELQLIVAEK QNLRRLQAQRNELNAKVRMLREELQLLQ
Sbjct: 7 MDIDEKNAKGEGFKPYYITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLREELQLLQ 66
Query: 130 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKIL 189
EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVD+DKNIDINDVTPN RVALRNESYTLHKIL
Sbjct: 67 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDLDKNIDINDVTPNSRVALRNESYTLHKIL 126
Query: 190 PNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVL 249
PNKVDPLVSLMMVEKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELFDALGIAQPKGVL
Sbjct: 127 PNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVL 186
Query: 250 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAH 309
LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA
Sbjct: 187 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA--------- 237
Query: 310 HPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN 369
REHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN
Sbjct: 238 --------------------REHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN 277
Query: 370 QLDGFEATK 378
QLDGFEATK
Sbjct: 278 QLDGFEATK 286
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 51/68 (75%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR S MD
Sbjct: 193 TGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPS----IIFMD 248
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 249 EIDSIGSS 256
>gi|380029623|ref|XP_003698467.1| PREDICTED: 26S protease regulatory subunit 8-like [Apis florea]
Length = 414
Score = 535 bits (1378), Expect = e-149, Method: Compositional matrix adjust.
Identities = 269/309 (87%), Positives = 272/309 (88%), Gaps = 29/309 (9%)
Query: 70 MDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQ 129
M++DE EGFKPYY+TKIEELQLIVAEK QNLRRLQAQRNELNAKVRMLREELQLLQ
Sbjct: 7 MEIDEKTMKGEGFKPYYITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLREELQLLQ 66
Query: 130 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKIL 189
EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPN RVALRNESYTLHKIL
Sbjct: 67 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNSRVALRNESYTLHKIL 126
Query: 190 PNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVL 249
PNKVDPLVSLMMVEKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELFDALGIAQPKGVL
Sbjct: 127 PNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVL 186
Query: 250 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAH 309
LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA
Sbjct: 187 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA--------- 237
Query: 310 HPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN 369
REHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN
Sbjct: 238 --------------------REHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN 277
Query: 370 QLDGFEATK 378
QLDGFEATK
Sbjct: 278 QLDGFEATK 286
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 51/68 (75%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR S MD
Sbjct: 193 TGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPS----IIFMD 248
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 249 EIDSIGSS 256
>gi|66520165|ref|XP_623053.1| PREDICTED: 26S protease regulatory subunit 8 isoform 1 [Apis
mellifera]
Length = 405
Score = 535 bits (1378), Expect = e-149, Method: Compositional matrix adjust.
Identities = 269/309 (87%), Positives = 272/309 (88%), Gaps = 29/309 (9%)
Query: 70 MDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQ 129
M++DE EGFKPYY+TKIEELQLIVAEK QNLRRLQAQRNELNAKVRMLREELQLLQ
Sbjct: 7 MEIDEKTMKGEGFKPYYITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLREELQLLQ 66
Query: 130 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKIL 189
EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPN RVALRNESYTLHKIL
Sbjct: 67 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNSRVALRNESYTLHKIL 126
Query: 190 PNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVL 249
PNKVDPLVSLMMVEKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELFDALGIAQPKGVL
Sbjct: 127 PNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVL 186
Query: 250 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAH 309
LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA
Sbjct: 187 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA--------- 237
Query: 310 HPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN 369
REHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN
Sbjct: 238 --------------------REHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN 277
Query: 370 QLDGFEATK 378
QLDGFEATK
Sbjct: 278 QLDGFEATK 286
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 51/68 (75%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR S MD
Sbjct: 193 TGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPS----IIFMD 248
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 249 EIDSIGSS 256
>gi|307175717|gb|EFN65582.1| 26S protease regulatory subunit 8 [Camponotus floridanus]
Length = 694
Score = 532 bits (1370), Expect = e-148, Method: Compositional matrix adjust.
Identities = 269/309 (87%), Positives = 272/309 (88%), Gaps = 29/309 (9%)
Query: 70 MDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQ 129
M++DE EGFKPYY+TKIEELQLIVAEK QNLRRLQAQRNELNAKVRMLREELQLLQ
Sbjct: 7 MEIDEKNVKGEGFKPYYITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLREELQLLQ 66
Query: 130 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKIL 189
EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPN RVALRNESYTLHKIL
Sbjct: 67 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNSRVALRNESYTLHKIL 126
Query: 190 PNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVL 249
PNKVDPLVSLMMVEKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELFDALGIAQPKGVL
Sbjct: 127 PNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVL 186
Query: 250 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAH 309
LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA
Sbjct: 187 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA--------- 237
Query: 310 HPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN 369
REHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN
Sbjct: 238 --------------------REHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN 277
Query: 370 QLDGFEATK 378
QLDGFEATK
Sbjct: 278 QLDGFEATK 286
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/68 (75%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR S MD
Sbjct: 193 TGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPS----IIFMD 248
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 249 EIDSIGSS 256
>gi|312372820|gb|EFR20697.1| hypothetical protein AND_19657 [Anopheles darlingi]
Length = 389
Score = 531 bits (1369), Expect = e-148, Method: Compositional matrix adjust.
Identities = 269/313 (85%), Positives = 274/313 (87%), Gaps = 31/313 (9%)
Query: 66 EFFTMDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREEL 125
+ TM+VD+ + EGF+ YYV KIEELQLIVAEK QNLRRLQAQRNELNAKVRMLREEL
Sbjct: 3 DISTMEVDQ--QRGEGFRSYYVQKIEELQLIVAEKNQNLRRLQAQRNELNAKVRMLREEL 60
Query: 126 QLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTL 185
QLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTL
Sbjct: 61 QLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTL 120
Query: 186 HKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQP 245
HKILPNKVDPLVSLMMVEKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELFDALGIAQP
Sbjct: 121 HKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQP 180
Query: 246 KGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKL 305
KGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA
Sbjct: 181 KGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA----- 235
Query: 306 AFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTML 365
REHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTML
Sbjct: 236 ------------------------REHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTML 271
Query: 366 ELLNQLDGFEATK 378
ELLNQLDGFEATK
Sbjct: 272 ELLNQLDGFEATK 284
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/68 (75%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR S MD
Sbjct: 191 TGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPS----IIFMD 246
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 247 EIDSIGSS 254
>gi|195044618|ref|XP_001991849.1| GH11847 [Drosophila grimshawi]
gi|193901607|gb|EDW00474.1| GH11847 [Drosophila grimshawi]
Length = 405
Score = 531 bits (1368), Expect = e-148, Method: Compositional matrix adjust.
Identities = 266/309 (86%), Positives = 271/309 (87%), Gaps = 29/309 (9%)
Query: 70 MDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQ 129
MD + A + EGF+ YY+ KIEELQLIVAEK QNLRRLQAQRNELNAKVRMLREELQLLQ
Sbjct: 7 MDTEAAYQKGEGFRSYYIQKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLREELQLLQ 66
Query: 130 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKIL 189
EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVD+DKNIDINDVTPNCRVALRNESYTLHKIL
Sbjct: 67 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDLDKNIDINDVTPNCRVALRNESYTLHKIL 126
Query: 190 PNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVL 249
PNKVDPLVSLMMVEKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELFDALGIAQPKGVL
Sbjct: 127 PNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVL 186
Query: 250 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAH 309
LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA
Sbjct: 187 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA--------- 237
Query: 310 HPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN 369
REHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN
Sbjct: 238 --------------------REHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN 277
Query: 370 QLDGFEATK 378
QLDGFEATK
Sbjct: 278 QLDGFEATK 286
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 51/68 (75%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR S MD
Sbjct: 193 TGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPS----IIFMD 248
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 249 EIDSIGSS 256
>gi|194769924|ref|XP_001967051.1| GF21725 [Drosophila ananassae]
gi|190622846|gb|EDV38370.1| GF21725 [Drosophila ananassae]
Length = 405
Score = 530 bits (1366), Expect = e-148, Method: Compositional matrix adjust.
Identities = 265/309 (85%), Positives = 272/309 (88%), Gaps = 29/309 (9%)
Query: 70 MDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQ 129
M+++ A + EGF+ YY+ KIEELQLIVAEK QNLRRLQAQRNELNAKVRMLREELQLLQ
Sbjct: 7 MEIESAYQKGEGFRSYYIQKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLREELQLLQ 66
Query: 130 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKIL 189
EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVD+DKNIDINDVTPNCRVALRNESYTLHKIL
Sbjct: 67 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDLDKNIDINDVTPNCRVALRNESYTLHKIL 126
Query: 190 PNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVL 249
PNKVDPLVSLMMVEKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELFDALGIAQPKGVL
Sbjct: 127 PNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVL 186
Query: 250 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAH 309
LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA
Sbjct: 187 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA--------- 237
Query: 310 HPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN 369
REHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN
Sbjct: 238 --------------------REHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN 277
Query: 370 QLDGFEATK 378
QLDGFEATK
Sbjct: 278 QLDGFEATK 286
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 51/68 (75%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR S MD
Sbjct: 193 TGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPS----IIFMD 248
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 249 EIDSIGSS 256
>gi|156544994|ref|XP_001608055.1| PREDICTED: 26S protease regulatory subunit 8-like [Nasonia
vitripennis]
Length = 405
Score = 530 bits (1365), Expect = e-148, Method: Compositional matrix adjust.
Identities = 266/309 (86%), Positives = 270/309 (87%), Gaps = 29/309 (9%)
Query: 70 MDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQ 129
M++DE EGFKPYY+ KIEELQLIVAEK QNLRRLQAQRNELNAKVRMLREELQLLQ
Sbjct: 7 MEIDEKTSKGEGFKPYYIQKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLREELQLLQ 66
Query: 130 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKIL 189
EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVD+DKNIDINDVTPN RVALRNESYTLHKIL
Sbjct: 67 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDLDKNIDINDVTPNSRVALRNESYTLHKIL 126
Query: 190 PNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVL 249
PNKVDPLVSLMMVEKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELFDALGIAQPKGVL
Sbjct: 127 PNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVL 186
Query: 250 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAH 309
LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA
Sbjct: 187 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA--------- 237
Query: 310 HPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN 369
REHAPSIIFMDEIDSIGSSRIESGS GDSEVQRTMLELLN
Sbjct: 238 --------------------REHAPSIIFMDEIDSIGSSRIESGSSGDSEVQRTMLELLN 277
Query: 370 QLDGFEATK 378
QLDGFEATK
Sbjct: 278 QLDGFEATK 286
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 51/68 (75%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR S MD
Sbjct: 193 TGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPS----IIFMD 248
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 249 EIDSIGSS 256
>gi|170048670|ref|XP_001870728.1| 26S protease regulatory subunit 8 [Culex quinquefasciatus]
gi|167870706|gb|EDS34089.1| 26S protease regulatory subunit 8 [Culex quinquefasciatus]
Length = 402
Score = 530 bits (1365), Expect = e-148, Method: Compositional matrix adjust.
Identities = 268/309 (86%), Positives = 271/309 (87%), Gaps = 31/309 (10%)
Query: 70 MDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQ 129
MDVD + EGF+ YY+ KIEELQLIVAEK QNLRRLQAQRNELNAKVRMLREELQLLQ
Sbjct: 6 MDVDS--QKGEGFRSYYIQKIEELQLIVAEKNQNLRRLQAQRNELNAKVRMLREELQLLQ 63
Query: 130 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKIL 189
EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKIL
Sbjct: 64 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKIL 123
Query: 190 PNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVL 249
PNKVDPLVSLMMVEKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELFDALGIAQPKGVL
Sbjct: 124 PNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVL 183
Query: 250 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAH 309
LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA
Sbjct: 184 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA--------- 234
Query: 310 HPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN 369
REHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN
Sbjct: 235 --------------------REHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN 274
Query: 370 QLDGFEATK 378
QLDGFEATK
Sbjct: 275 QLDGFEATK 283
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 51/68 (75%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR S MD
Sbjct: 190 TGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPS----IIFMD 245
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 246 EIDSIGSS 253
>gi|125983936|ref|XP_001355733.1| GA13327 [Drosophila pseudoobscura pseudoobscura]
gi|54644049|gb|EAL32792.1| GA13327 [Drosophila pseudoobscura pseudoobscura]
Length = 405
Score = 530 bits (1365), Expect = e-148, Method: Compositional matrix adjust.
Identities = 265/309 (85%), Positives = 272/309 (88%), Gaps = 29/309 (9%)
Query: 70 MDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQ 129
M+++ A + EGF+ YY+ KIEELQLIVAEK QNLRRLQAQRNELNAKVRMLREELQLLQ
Sbjct: 7 MEIETAYQKGEGFRSYYIQKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLREELQLLQ 66
Query: 130 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKIL 189
EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVD+DKNIDINDVTPNCRVALRNESYTLHKIL
Sbjct: 67 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDLDKNIDINDVTPNCRVALRNESYTLHKIL 126
Query: 190 PNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVL 249
PNKVDPLVSLMMVEKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELFDALGIAQPKGVL
Sbjct: 127 PNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVL 186
Query: 250 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAH 309
LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA
Sbjct: 187 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA--------- 237
Query: 310 HPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN 369
REHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN
Sbjct: 238 --------------------REHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN 277
Query: 370 QLDGFEATK 378
QLDGFEATK
Sbjct: 278 QLDGFEATK 286
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 51/68 (75%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR S MD
Sbjct: 193 TGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPS----IIFMD 248
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 249 EIDSIGSS 256
>gi|242005917|ref|XP_002423806.1| 26S protease regulatory subunit, putative [Pediculus humanus
corporis]
gi|212507022|gb|EEB11068.1| 26S protease regulatory subunit, putative [Pediculus humanus
corporis]
Length = 414
Score = 530 bits (1364), Expect = e-148, Method: Compositional matrix adjust.
Identities = 268/309 (86%), Positives = 271/309 (87%), Gaps = 29/309 (9%)
Query: 70 MDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQ 129
M+VDE EGF+PYYVTKIEELQLIVAEK QNLRRLQAQRNELNAKVRMLREELQLLQ
Sbjct: 16 MEVDEKPHKDEGFRPYYVTKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLREELQLLQ 75
Query: 130 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKIL 189
EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPN RVALRNESYTLHKIL
Sbjct: 76 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNSRVALRNESYTLHKIL 135
Query: 190 PNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVL 249
PNKVDPLVSLMMVEKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELFDALGIAQPKGVL
Sbjct: 136 PNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVL 195
Query: 250 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAH 309
LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA
Sbjct: 196 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA--------- 246
Query: 310 HPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN 369
REHAPSIIFMDEIDSIGSSRIES +GGDSEVQRTMLELLN
Sbjct: 247 --------------------REHAPSIIFMDEIDSIGSSRIESANGGDSEVQRTMLELLN 286
Query: 370 QLDGFEATK 378
QLDGFEATK
Sbjct: 287 QLDGFEATK 295
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 51/68 (75%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR S MD
Sbjct: 202 TGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPS----IIFMD 257
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 258 EIDSIGSS 265
>gi|194897562|ref|XP_001978679.1| GG19719 [Drosophila erecta]
gi|195346140|ref|XP_002039625.1| GM23074 [Drosophila sechellia]
gi|195482260|ref|XP_002101976.1| GE17917 [Drosophila yakuba]
gi|195567993|ref|XP_002107540.1| GD17527 [Drosophila simulans]
gi|190650328|gb|EDV47606.1| GG19719 [Drosophila erecta]
gi|194134851|gb|EDW56367.1| GM23074 [Drosophila sechellia]
gi|194189500|gb|EDX03084.1| GE17917 [Drosophila yakuba]
gi|194204950|gb|EDX18526.1| GD17527 [Drosophila simulans]
Length = 405
Score = 529 bits (1363), Expect = e-148, Method: Compositional matrix adjust.
Identities = 264/309 (85%), Positives = 272/309 (88%), Gaps = 29/309 (9%)
Query: 70 MDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQ 129
M+++ A + EGF+ YY+ KIEELQL+VAEK QNLRRLQAQRNELNAKVRMLREELQLLQ
Sbjct: 7 MEIESAYQKGEGFRSYYIQKIEELQLVVAEKHQNLRRLQAQRNELNAKVRMLREELQLLQ 66
Query: 130 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKIL 189
EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVD+DKNIDINDVTPNCRVALRNESYTLHKIL
Sbjct: 67 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDLDKNIDINDVTPNCRVALRNESYTLHKIL 126
Query: 190 PNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVL 249
PNKVDPLVSLMMVEKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELFDALGIAQPKGVL
Sbjct: 127 PNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVL 186
Query: 250 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAH 309
LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA
Sbjct: 187 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA--------- 237
Query: 310 HPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN 369
REHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN
Sbjct: 238 --------------------REHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN 277
Query: 370 QLDGFEATK 378
QLDGFEATK
Sbjct: 278 QLDGFEATK 286
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 51/68 (75%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR S MD
Sbjct: 193 TGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPS----IIFMD 248
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 249 EIDSIGSS 256
>gi|195393634|ref|XP_002055458.1| GJ19383 [Drosophila virilis]
gi|194149968|gb|EDW65659.1| GJ19383 [Drosophila virilis]
Length = 405
Score = 529 bits (1363), Expect = e-148, Method: Compositional matrix adjust.
Identities = 265/309 (85%), Positives = 271/309 (87%), Gaps = 29/309 (9%)
Query: 70 MDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQ 129
+D + A + EGF+ YY+ KIEELQLIVAEK QNLRRLQAQRNELNAKVRMLREELQLLQ
Sbjct: 7 VDTEAAYQKGEGFRSYYIQKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLREELQLLQ 66
Query: 130 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKIL 189
EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVD+DKNIDINDVTPNCRVALRNESYTLHKIL
Sbjct: 67 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDLDKNIDINDVTPNCRVALRNESYTLHKIL 126
Query: 190 PNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVL 249
PNKVDPLVSLMMVEKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELFDALGIAQPKGVL
Sbjct: 127 PNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVL 186
Query: 250 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAH 309
LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA
Sbjct: 187 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA--------- 237
Query: 310 HPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN 369
REHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN
Sbjct: 238 --------------------REHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN 277
Query: 370 QLDGFEATK 378
QLDGFEATK
Sbjct: 278 QLDGFEATK 286
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 51/68 (75%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR S MD
Sbjct: 193 TGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPS----IIFMD 248
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 249 EIDSIGSS 256
>gi|157106669|ref|XP_001649429.1| 26S protease regulatory subunit [Aedes aegypti]
gi|157136893|ref|XP_001663850.1| 26S protease regulatory subunit [Aedes aegypti]
gi|108868799|gb|EAT33024.1| AAEL014723-PA [Aedes aegypti]
gi|108869833|gb|EAT34058.1| AAEL013676-PA [Aedes aegypti]
Length = 403
Score = 528 bits (1361), Expect = e-147, Method: Compositional matrix adjust.
Identities = 268/314 (85%), Positives = 272/314 (86%), Gaps = 31/314 (9%)
Query: 65 TEFFTMDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREE 124
T M+VD + EGF+ YY+ KIEELQLIVAEK QNLRRLQAQRNELNAKVRMLREE
Sbjct: 2 TNSSKMEVD--TQKGEGFRSYYIQKIEELQLIVAEKNQNLRRLQAQRNELNAKVRMLREE 59
Query: 125 LQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYT 184
LQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYT
Sbjct: 60 LQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYT 119
Query: 185 LHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQ 244
LHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELFDALGIAQ
Sbjct: 120 LHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQ 179
Query: 245 PKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKK 304
PKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA
Sbjct: 180 PKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA---- 235
Query: 305 LAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTM 364
REHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTM
Sbjct: 236 -------------------------REHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTM 270
Query: 365 LELLNQLDGFEATK 378
LELLNQLDGFEATK
Sbjct: 271 LELLNQLDGFEATK 284
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 51/68 (75%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR S MD
Sbjct: 191 TGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPS----IIFMD 246
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 247 EIDSIGSS 254
>gi|19920408|ref|NP_608447.1| Pros45 [Drosophila melanogaster]
gi|14286160|sp|O18413.2|PRS8_DROME RecName: Full=26S protease regulatory subunit 8
gi|2815905|gb|AAC63219.1| Pros45 proteosome subunit homolog [Drosophila melanogaster]
gi|7295522|gb|AAF50835.1| Pros45 [Drosophila melanogaster]
gi|15291775|gb|AAK93156.1| LD26005p [Drosophila melanogaster]
gi|220945798|gb|ACL85442.1| Pros45-PA [synthetic construct]
gi|220955554|gb|ACL90320.1| Pros45-PA [synthetic construct]
Length = 405
Score = 528 bits (1361), Expect = e-147, Method: Compositional matrix adjust.
Identities = 264/309 (85%), Positives = 271/309 (87%), Gaps = 29/309 (9%)
Query: 70 MDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQ 129
M+++ A EGF+ YY+ KIEELQL+VAEK QNLRRLQAQRNELNAKVRMLREELQLLQ
Sbjct: 7 MEIESAYHKGEGFRSYYIQKIEELQLVVAEKHQNLRRLQAQRNELNAKVRMLREELQLLQ 66
Query: 130 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKIL 189
EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVD+DKNIDINDVTPNCRVALRNESYTLHKIL
Sbjct: 67 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDLDKNIDINDVTPNCRVALRNESYTLHKIL 126
Query: 190 PNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVL 249
PNKVDPLVSLMMVEKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELFDALGIAQPKGVL
Sbjct: 127 PNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVL 186
Query: 250 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAH 309
LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA
Sbjct: 187 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA--------- 237
Query: 310 HPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN 369
REHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN
Sbjct: 238 --------------------REHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN 277
Query: 370 QLDGFEATK 378
QLDGFEATK
Sbjct: 278 QLDGFEATK 286
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/68 (75%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR S MD
Sbjct: 193 TGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPS----IIFMD 248
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 249 EIDSIGSS 256
>gi|58376339|ref|XP_308557.2| AGAP007243-PA [Anopheles gambiae str. PEST]
gi|55245639|gb|EAA04200.3| AGAP007243-PA [Anopheles gambiae str. PEST]
Length = 403
Score = 528 bits (1360), Expect = e-147, Method: Compositional matrix adjust.
Identities = 270/313 (86%), Positives = 272/313 (86%), Gaps = 31/313 (9%)
Query: 66 EFFTMDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREEL 125
E TMDVD EGF+ Y+V KIEELQLIVAEK QNLRRLQAQRNELNAKVRMLREEL
Sbjct: 3 ETSTMDVDPP--RGEGFRSYFVQKIEELQLIVAEKNQNLRRLQAQRNELNAKVRMLREEL 60
Query: 126 QLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTL 185
QLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTL
Sbjct: 61 QLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTL 120
Query: 186 HKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQP 245
HKILPNKVDPLVSLMMVEKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELFDALGIAQP
Sbjct: 121 HKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQP 180
Query: 246 KGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKL 305
KGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA
Sbjct: 181 KGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA----- 235
Query: 306 AFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTML 365
REHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTML
Sbjct: 236 ------------------------REHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTML 271
Query: 366 ELLNQLDGFEATK 378
ELLNQLDGFEATK
Sbjct: 272 ELLNQLDGFEATK 284
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/68 (75%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR S MD
Sbjct: 191 TGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPS----IIFMD 246
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 247 EIDSIGSS 254
>gi|1709799|sp|P54814.1|PRS8_MANSE RecName: Full=26S protease regulatory subunit 8; AltName:
Full=Protein 18-56
gi|1167963|gb|AAC46996.1| 18-56 protein [Manduca sexta]
Length = 402
Score = 528 bits (1360), Expect = e-147, Method: Compositional matrix adjust.
Identities = 266/309 (86%), Positives = 271/309 (87%), Gaps = 31/309 (10%)
Query: 70 MDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQ 129
M+VD EGF+PYY+TKIEELQLIVAEK QNLRRLQAQRNELNAKVRMLREELQLLQ
Sbjct: 6 MEVDST--KGEGFRPYYITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLREELQLLQ 63
Query: 130 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKIL 189
EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVD+DKN+DINDVT NCRVALRNESYTLHKIL
Sbjct: 64 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKIL 123
Query: 190 PNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVL 249
PNKVDPLVSLMMVEKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELFDALGIAQPKGVL
Sbjct: 124 PNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVL 183
Query: 250 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAH 309
LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA
Sbjct: 184 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA--------- 234
Query: 310 HPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN 369
REHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN
Sbjct: 235 --------------------REHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN 274
Query: 370 QLDGFEATK 378
QLDGFEATK
Sbjct: 275 QLDGFEATK 283
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 51/68 (75%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR S MD
Sbjct: 190 TGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPS----IIFMD 245
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 246 EIDSIGSS 253
>gi|332374604|gb|AEE62443.1| unknown [Dendroctonus ponderosae]
Length = 405
Score = 527 bits (1358), Expect = e-147, Method: Compositional matrix adjust.
Identities = 267/309 (86%), Positives = 270/309 (87%), Gaps = 29/309 (9%)
Query: 70 MDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQ 129
M+VD EGF+ YY+TKIEELQLIVAEK QNLRRLQAQRNELNAKVRMLREEL LLQ
Sbjct: 7 MEVDGGGPKGEGFRSYYITKIEELQLIVAEKGQNLRRLQAQRNELNAKVRMLREELMLLQ 66
Query: 130 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKIL 189
EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKIL
Sbjct: 67 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKIL 126
Query: 190 PNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVL 249
PNKVDPLVSLMMVEKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELFDALGIAQPKGVL
Sbjct: 127 PNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVL 186
Query: 250 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAH 309
LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA
Sbjct: 187 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA--------- 237
Query: 310 HPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN 369
REHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN
Sbjct: 238 --------------------REHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN 277
Query: 370 QLDGFEATK 378
QLDGFEATK
Sbjct: 278 QLDGFEATK 286
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/68 (75%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR S MD
Sbjct: 193 TGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPS----IIFMD 248
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 249 EIDSIGSS 256
>gi|389609225|dbj|BAM18224.1| 26S protease regulatory subunit [Papilio xuthus]
Length = 402
Score = 527 bits (1358), Expect = e-147, Method: Compositional matrix adjust.
Identities = 266/309 (86%), Positives = 271/309 (87%), Gaps = 31/309 (10%)
Query: 70 MDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQ 129
M+VD EGF+PYY+TKIEELQLIVAEK QNLRRLQAQRNELNAKVRMLREELQLLQ
Sbjct: 6 MEVDPV--KGEGFRPYYITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLREELQLLQ 63
Query: 130 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKIL 189
EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVD+DKN+DINDVT NCRVALRNESYTLHKIL
Sbjct: 64 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKIL 123
Query: 190 PNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVL 249
PNKVDPLVSLMMVEKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELFDALGIAQPKGVL
Sbjct: 124 PNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVL 183
Query: 250 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAH 309
LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA
Sbjct: 184 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA--------- 234
Query: 310 HPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN 369
REHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN
Sbjct: 235 --------------------REHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN 274
Query: 370 QLDGFEATK 378
QLDGFEATK
Sbjct: 275 QLDGFEATK 283
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 51/68 (75%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR S MD
Sbjct: 190 TGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPS----IIFMD 245
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 246 EIDSIGSS 253
>gi|270013070|gb|EFA09518.1| hypothetical protein TcasGA2_TC011620 [Tribolium castaneum]
Length = 441
Score = 527 bits (1357), Expect = e-147, Method: Compositional matrix adjust.
Identities = 268/309 (86%), Positives = 271/309 (87%), Gaps = 30/309 (9%)
Query: 70 MDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQ 129
M+VD K EGF+ YY+TKIEELQLIVAEK QNLRRLQAQRNELNAKVRMLREEL LLQ
Sbjct: 44 MEVDGGPKG-EGFRSYYITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLREELMLLQ 102
Query: 130 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKIL 189
EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKIL
Sbjct: 103 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKIL 162
Query: 190 PNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVL 249
PNKVDPLVSLMMVEKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELFDALGIAQPKGVL
Sbjct: 163 PNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVL 222
Query: 250 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAH 309
LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA
Sbjct: 223 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA--------- 273
Query: 310 HPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN 369
REHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN
Sbjct: 274 --------------------REHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN 313
Query: 370 QLDGFEATK 378
QLDGFEATK
Sbjct: 314 QLDGFEATK 322
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 51/68 (75%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR S MD
Sbjct: 229 TGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPS----IIFMD 284
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 285 EIDSIGSS 292
>gi|357625638|gb|EHJ76020.1| 26S protease regulatory subunit 8 [Danaus plexippus]
Length = 397
Score = 526 bits (1356), Expect = e-147, Method: Compositional matrix adjust.
Identities = 265/309 (85%), Positives = 271/309 (87%), Gaps = 31/309 (10%)
Query: 70 MDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQ 129
M+VD EGF+PYY+TKIEELQL+VAEK QNLRRLQAQRNELNAKVRMLREELQLLQ
Sbjct: 1 MEVDSV--KGEGFRPYYITKIEELQLVVAEKSQNLRRLQAQRNELNAKVRMLREELQLLQ 58
Query: 130 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKIL 189
EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVD+DKN+DINDVT NCRVALRNESYTLHKIL
Sbjct: 59 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKIL 118
Query: 190 PNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVL 249
PNKVDPLVSLMMVEKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELFDALGIAQPKGVL
Sbjct: 119 PNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVL 178
Query: 250 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAH 309
LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA
Sbjct: 179 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA--------- 229
Query: 310 HPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN 369
REHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN
Sbjct: 230 --------------------REHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN 269
Query: 370 QLDGFEATK 378
QLDGFEATK
Sbjct: 270 QLDGFEATK 278
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/68 (75%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR S MD
Sbjct: 185 TGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPS----IIFMD 240
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 241 EIDSIGSS 248
>gi|195438627|ref|XP_002067234.1| GK16292 [Drosophila willistoni]
gi|194163319|gb|EDW78220.1| GK16292 [Drosophila willistoni]
Length = 405
Score = 526 bits (1355), Expect = e-147, Method: Compositional matrix adjust.
Identities = 263/309 (85%), Positives = 270/309 (87%), Gaps = 29/309 (9%)
Query: 70 MDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQ 129
M+++ + EGF+ YY+ KIEELQLIVAEK QNLRRLQAQRNELNAKVRMLREELQLLQ
Sbjct: 7 MEIESVYQKGEGFRSYYIQKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLREELQLLQ 66
Query: 130 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKIL 189
EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVD+DKNIDINDV PNCRVALRNESYTLHKIL
Sbjct: 67 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDLDKNIDINDVAPNCRVALRNESYTLHKIL 126
Query: 190 PNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVL 249
PNKVDPLVSLMMVEKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELFDALGIAQPKGVL
Sbjct: 127 PNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVL 186
Query: 250 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAH 309
LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA
Sbjct: 187 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA--------- 237
Query: 310 HPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN 369
REHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN
Sbjct: 238 --------------------REHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN 277
Query: 370 QLDGFEATK 378
QLDGFEATK
Sbjct: 278 QLDGFEATK 286
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 51/68 (75%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR S MD
Sbjct: 193 TGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPS----IIFMD 248
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 249 EIDSIGSS 256
>gi|91091360|ref|XP_972551.1| PREDICTED: similar to GA13327-PA [Tribolium castaneum]
Length = 404
Score = 526 bits (1355), Expect = e-147, Method: Compositional matrix adjust.
Identities = 268/309 (86%), Positives = 271/309 (87%), Gaps = 30/309 (9%)
Query: 70 MDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQ 129
M+VD K EGF+ YY+TKIEELQLIVAEK QNLRRLQAQRNELNAKVRMLREEL LLQ
Sbjct: 7 MEVDGGPKG-EGFRSYYITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLREELMLLQ 65
Query: 130 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKIL 189
EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKIL
Sbjct: 66 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKIL 125
Query: 190 PNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVL 249
PNKVDPLVSLMMVEKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELFDALGIAQPKGVL
Sbjct: 126 PNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVL 185
Query: 250 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAH 309
LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA
Sbjct: 186 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA--------- 236
Query: 310 HPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN 369
REHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN
Sbjct: 237 --------------------REHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN 276
Query: 370 QLDGFEATK 378
QLDGFEATK
Sbjct: 277 QLDGFEATK 285
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/68 (75%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR S MD
Sbjct: 192 TGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPS----IIFMD 247
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 248 EIDSIGSS 255
>gi|289743503|gb|ADD20499.1| 26S proteasome regulatory complex ATPase RPT6 [Glossina morsitans
morsitans]
Length = 404
Score = 525 bits (1353), Expect = e-146, Method: Compositional matrix adjust.
Identities = 266/309 (86%), Positives = 272/309 (88%), Gaps = 30/309 (9%)
Query: 70 MDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQ 129
MD++ A K EGF+ YY+ KIEELQLI+AEK QNLRRL+AQRNELNAKVRMLREELQLLQ
Sbjct: 7 MDIECACKG-EGFRSYYIQKIEELQLILAEKSQNLRRLEAQRNELNAKVRMLREELQLLQ 65
Query: 130 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKIL 189
EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKIL
Sbjct: 66 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKIL 125
Query: 190 PNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVL 249
PNKVDPLVSLMMVEKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELFDALGIAQPKGVL
Sbjct: 126 PNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVL 185
Query: 250 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAH 309
LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA
Sbjct: 186 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA--------- 236
Query: 310 HPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN 369
REHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN
Sbjct: 237 --------------------REHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN 276
Query: 370 QLDGFEATK 378
QLDGFEATK
Sbjct: 277 QLDGFEATK 285
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/68 (75%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR S MD
Sbjct: 192 TGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPS----IIFMD 247
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 248 EIDSIGSS 255
>gi|195134921|ref|XP_002011885.1| GI14329 [Drosophila mojavensis]
gi|193909139|gb|EDW08006.1| GI14329 [Drosophila mojavensis]
Length = 405
Score = 525 bits (1353), Expect = e-146, Method: Compositional matrix adjust.
Identities = 264/309 (85%), Positives = 269/309 (87%), Gaps = 29/309 (9%)
Query: 70 MDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQ 129
MD++ GF+ YY+ KIEELQLIVAEK QNLRRLQAQRNELNAKVRMLREELQLLQ
Sbjct: 7 MDLESVYNVGVGFRSYYIQKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLREELQLLQ 66
Query: 130 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKIL 189
EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVD+DKNIDINDVTPNCRVALRNESYTLHKIL
Sbjct: 67 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDLDKNIDINDVTPNCRVALRNESYTLHKIL 126
Query: 190 PNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVL 249
PNKVDPLVSLMMVEKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELFDALGIAQPKGVL
Sbjct: 127 PNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVL 186
Query: 250 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAH 309
LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA
Sbjct: 187 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA--------- 237
Query: 310 HPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN 369
REHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN
Sbjct: 238 --------------------REHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN 277
Query: 370 QLDGFEATK 378
QLDGFEATK
Sbjct: 278 QLDGFEATK 286
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 51/68 (75%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR S MD
Sbjct: 193 TGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPS----IIFMD 248
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 249 EIDSIGSS 256
>gi|2245467|gb|AAC48284.1| DUG [Drosophila melanogaster]
Length = 405
Score = 525 bits (1352), Expect = e-146, Method: Compositional matrix adjust.
Identities = 263/309 (85%), Positives = 270/309 (87%), Gaps = 29/309 (9%)
Query: 70 MDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQ 129
M+++ A EGF+ YY+ KIEELQL+VAEK QNLRRLQAQRNELNAKVRMLREELQLLQ
Sbjct: 7 MEIESAYHKGEGFRSYYIQKIEELQLVVAEKHQNLRRLQAQRNELNAKVRMLREELQLLQ 66
Query: 130 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKIL 189
EQGSYVGEVVKPMDKKKVLVKVHPEGK VVD+DKNIDINDVTPNCRVALRNESYTLHKIL
Sbjct: 67 EQGSYVGEVVKPMDKKKVLVKVHPEGKSVVDLDKNIDINDVTPNCRVALRNESYTLHKIL 126
Query: 190 PNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVL 249
PNKVDPLVSLMMVEKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELFDALGIAQPKGVL
Sbjct: 127 PNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVL 186
Query: 250 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAH 309
LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA
Sbjct: 187 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA--------- 237
Query: 310 HPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN 369
REHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN
Sbjct: 238 --------------------REHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN 277
Query: 370 QLDGFEATK 378
QLDGFEATK
Sbjct: 278 QLDGFEATK 286
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 51/68 (75%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR S MD
Sbjct: 193 TGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPS----IIFMD 248
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 249 EIDSIGSS 256
>gi|321468365|gb|EFX79350.1| hypothetical protein DAPPUDRAFT_52572 [Daphnia pulex]
Length = 399
Score = 520 bits (1339), Expect = e-145, Method: Compositional matrix adjust.
Identities = 260/309 (84%), Positives = 269/309 (87%), Gaps = 29/309 (9%)
Query: 70 MDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQ 129
M+VD A EG + YY+TKIEELQL+VAEK QNLRRLQAQRNELNAKVRMLREELQLLQ
Sbjct: 1 MEVDAASPKGEGLRQYYITKIEELQLVVAEKAQNLRRLQAQRNELNAKVRMLREELQLLQ 60
Query: 130 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKIL 189
EQGSYVGEVVK MDKKKVLVKVHPEGKFVVDIDKNIDIND+ PNCRVALRN+SYTLHKIL
Sbjct: 61 EQGSYVGEVVKAMDKKKVLVKVHPEGKFVVDIDKNIDINDIKPNCRVALRNDSYTLHKIL 120
Query: 190 PNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVL 249
P+KVDPLVSLMMVEKVPDSTYEMVGGLD QIKEIKEVIELP+KHPELFDALGIAQPKGVL
Sbjct: 121 PSKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPIKHPELFDALGIAQPKGVL 180
Query: 250 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAH 309
LYGPPGTGKTLLARAVAHHT+CTFIRVSGSELVQKFIGEGSRMVRELFVMA
Sbjct: 181 LYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGSRMVRELFVMA--------- 231
Query: 310 HPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN 369
REHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN
Sbjct: 232 --------------------REHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN 271
Query: 370 QLDGFEATK 378
QLDGFEATK
Sbjct: 272 QLDGFEATK 280
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/68 (73%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+CTFIRVSGSELVQKFIGEGSRMVRELFVMAR S MD
Sbjct: 187 TGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPS----IIFMD 242
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 243 EIDSIGSS 250
>gi|391331369|ref|XP_003740119.1| PREDICTED: 26S protease regulatory subunit 8-like [Metaseiulus
occidentalis]
Length = 412
Score = 514 bits (1324), Expect = e-143, Method: Compositional matrix adjust.
Identities = 257/302 (85%), Positives = 266/302 (88%), Gaps = 29/302 (9%)
Query: 77 KSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVG 136
K EG K Y++TKIEELQL+VAEK QNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVG
Sbjct: 21 KEREGLKQYFITKIEELQLVVAEKTQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVG 80
Query: 137 EVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPL 196
EVVKPMDKKKVLVKVHPEGKFVVDIDKNID++ VTPNCRVALRN+SYTLHKILPNKVDPL
Sbjct: 81 EVVKPMDKKKVLVKVHPEGKFVVDIDKNIDMSQVTPNCRVALRNDSYTLHKILPNKVDPL 140
Query: 197 VSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGT 256
VSLMMVEKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELF+ALGIAQPKGVLLYGPPGT
Sbjct: 141 VSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGT 200
Query: 257 GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWS 316
GKTLLARAVAHHT+CTFIRVSGSELVQKFIGEGSRMVRELFVMA
Sbjct: 201 GKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGSRMVRELFVMA---------------- 244
Query: 317 LLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
REHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA
Sbjct: 245 -------------REHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 291
Query: 377 TK 378
T+
Sbjct: 292 TR 293
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/68 (73%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+CTFIRVSGSELVQKFIGEGSRMVRELFVMAR S MD
Sbjct: 200 TGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPS----IIFMD 255
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 256 EIDSIGSS 263
>gi|291225648|ref|XP_002732818.1| PREDICTED: Pros45-like [Saccoglossus kowalevskii]
Length = 376
Score = 513 bits (1322), Expect = e-143, Method: Compositional matrix adjust.
Identities = 257/309 (83%), Positives = 268/309 (86%), Gaps = 29/309 (9%)
Query: 70 MDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQ 129
M+VDEA + EG K YY+ KIEELQL+V +K QNLRRLQAQRNELNAKVRMLREELQLLQ
Sbjct: 12 MEVDEAPNNHEGIKQYYIAKIEELQLVVTDKTQNLRRLQAQRNELNAKVRMLREELQLLQ 71
Query: 130 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKIL 189
EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNID+ DVTPNCRVALRN+SYTLHKIL
Sbjct: 72 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDMGDVTPNCRVALRNDSYTLHKIL 131
Query: 190 PNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVL 249
PNKVDPLVSLMMVEKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELF+ALGIAQPKGVL
Sbjct: 132 PNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVL 191
Query: 250 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAH 309
LYGPPGTGKTLLARAVAHHT+CTFIRVSGSELVQKFIGEGSRMVRELFVMA
Sbjct: 192 LYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGSRMVRELFVMA--------- 242
Query: 310 HPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN 369
REHAPSIIFMDEIDSIGSSR+E GSGGDSEVQRTMLELLN
Sbjct: 243 --------------------REHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLN 282
Query: 370 QLDGFEATK 378
QLDGFE+ K
Sbjct: 283 QLDGFESHK 291
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/68 (73%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+CTFIRVSGSELVQKFIGEGSRMVRELFVMAR S MD
Sbjct: 198 TGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPS----IIFMD 253
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 254 EIDSIGSS 261
>gi|427782241|gb|JAA56572.1| Putative 26s proteasome regulatory complex atpase rpt2
[Rhipicephalus pulchellus]
Length = 398
Score = 509 bits (1312), Expect = e-142, Method: Compositional matrix adjust.
Identities = 256/309 (82%), Positives = 269/309 (87%), Gaps = 30/309 (9%)
Query: 70 MDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQ 129
M+VD + +G K YY+TKIEELQL+V++K QNLRRLQAQRNELNAKVRMLREELQLLQ
Sbjct: 1 MEVD-GVSKGDGLKQYYITKIEELQLVVSDKTQNLRRLQAQRNELNAKVRMLREELQLLQ 59
Query: 130 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKIL 189
EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDI +VTPN RVALRN+SYTLHKIL
Sbjct: 60 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDIANVTPNSRVALRNDSYTLHKIL 119
Query: 190 PNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVL 249
PNKVDPLVSLMMVEKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELF+ALGIAQPKGVL
Sbjct: 120 PNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVL 179
Query: 250 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAH 309
LYGPPGTGKTLLARAVAHHT+CTFIRVSGSELVQKFIGEGSRMVRELFVMA
Sbjct: 180 LYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGSRMVRELFVMA--------- 230
Query: 310 HPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN 369
REHAPSIIFMDEIDSIGSSRI++GSGGDSEVQRTMLELLN
Sbjct: 231 --------------------REHAPSIIFMDEIDSIGSSRIDAGSGGDSEVQRTMLELLN 270
Query: 370 QLDGFEATK 378
QLDGFEATK
Sbjct: 271 QLDGFEATK 279
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/68 (73%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+CTFIRVSGSELVQKFIGEGSRMVRELFVMAR S MD
Sbjct: 186 TGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPS----IIFMD 241
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 242 EIDSIGSS 249
>gi|346470567|gb|AEO35128.1| hypothetical protein [Amblyomma maculatum]
Length = 433
Score = 509 bits (1311), Expect = e-142, Method: Compositional matrix adjust.
Identities = 257/311 (82%), Positives = 269/311 (86%), Gaps = 30/311 (9%)
Query: 68 FTMDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQL 127
M+VD A +G K YY+TKIEELQL+V++K QNLRRLQAQRNELNAKVRMLREELQL
Sbjct: 34 LQMEVD-APSKGDGLKQYYITKIEELQLVVSDKTQNLRRLQAQRNELNAKVRMLREELQL 92
Query: 128 LQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHK 187
LQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDI +VTPN RVALRN+SYTLHK
Sbjct: 93 LQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDIANVTPNSRVALRNDSYTLHK 152
Query: 188 ILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKG 247
ILPNKVDPLVSLMMVEKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELF+ALGIAQPKG
Sbjct: 153 ILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKG 212
Query: 248 VLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAF 307
VLLYGPPGTGKTLLARAVAHHT+CTFIRVSGSELVQKFIGEGSRMVRELFVMA
Sbjct: 213 VLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGSRMVRELFVMA------- 265
Query: 308 AHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLEL 367
REHAPSIIFMDEIDSIGSSRI++GSGGDSEVQRTMLEL
Sbjct: 266 ----------------------REHAPSIIFMDEIDSIGSSRIDAGSGGDSEVQRTMLEL 303
Query: 368 LNQLDGFEATK 378
LNQLDGFEATK
Sbjct: 304 LNQLDGFEATK 314
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/68 (73%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+CTFIRVSGSELVQKFIGEGSRMVRELFVMAR S MD
Sbjct: 221 TGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPS----IIFMD 276
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 277 EIDSIGSS 284
>gi|225712564|gb|ACO12128.1| 26S protease regulatory subunit 8 [Lepeophtheirus salmonis]
gi|290462495|gb|ADD24295.1| 26S protease regulatory subunit 8 [Lepeophtheirus salmonis]
gi|290561817|gb|ADD38306.1| 26S protease regulatory subunit 8 [Lepeophtheirus salmonis]
Length = 410
Score = 506 bits (1304), Expect = e-141, Method: Compositional matrix adjust.
Identities = 258/314 (82%), Positives = 267/314 (85%), Gaps = 31/314 (9%)
Query: 67 FFTMDVDEAIKS-SEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREEL 125
+M+ DE +K SEG + YYVTKIEEL VA K QNLRRL+AQRNELNAKVRMLREEL
Sbjct: 7 LISMETDEVVKRPSEGLRTYYVTKIEELGQTVANKNQNLRRLEAQRNELNAKVRMLREEL 66
Query: 126 QLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTL 185
QLLQEQGSYVGEVVK MDKKKVLVKVHPEGKFVVDIDKNIDI ++TPNCRVALRN+SY L
Sbjct: 67 QLLQEQGSYVGEVVKAMDKKKVLVKVHPEGKFVVDIDKNIDIGEITPNCRVALRNDSYAL 126
Query: 186 HKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQP 245
HKILPNKVDPLVSLMMVEKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELFDALGIAQP
Sbjct: 127 HKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQP 186
Query: 246 KGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKL 305
KGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA
Sbjct: 187 KGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA----- 241
Query: 306 AFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGS-GGDSEVQRTM 364
REHAPSIIFMDEIDSIGS+RIESGS GGDSEVQRTM
Sbjct: 242 ------------------------REHAPSIIFMDEIDSIGSARIESGSGGGDSEVQRTM 277
Query: 365 LELLNQLDGFEATK 378
LELLNQLDGFEATK
Sbjct: 278 LELLNQLDGFEATK 291
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/46 (97%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR
Sbjct: 197 TGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 242
>gi|392873940|gb|AFM85802.1| 26S protease regulatory subunit 8-like isoform 2 [Callorhinchus
milii]
gi|392882570|gb|AFM90117.1| 26S protease regulatory subunit 8-like isoform 2 [Callorhinchus
milii]
Length = 406
Score = 506 bits (1302), Expect = e-141, Method: Compositional matrix adjust.
Identities = 253/309 (81%), Positives = 267/309 (86%), Gaps = 30/309 (9%)
Query: 70 MDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQ 129
M+V+E K G + YY++KIEELQL V +K QNLRRLQAQRNELNAKVRMLREELQLLQ
Sbjct: 9 MEVEEG-KGGTGLRQYYLSKIEELQLTVNDKSQNLRRLQAQRNELNAKVRMLREELQLLQ 67
Query: 130 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKIL 189
EQGSYVGEVV+ MDKKKVLVKVHPEGKFVVD+DKNIDINDVTPNCRVALRN+SYTLHKIL
Sbjct: 68 EQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKIL 127
Query: 190 PNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVL 249
PNKVDPLVSLMMVEKVPDSTYEM+GGLD QIKEIKEVIELPVKHPELF+ALGIAQPKGVL
Sbjct: 128 PNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVL 187
Query: 250 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAH 309
LYGPPGTGKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMA
Sbjct: 188 LYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMA--------- 238
Query: 310 HPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN 369
REHAPSIIFMDEIDSIGSSR+E GSGGDSEVQRTMLELLN
Sbjct: 239 --------------------REHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLN 278
Query: 370 QLDGFEATK 378
QLDGFEATK
Sbjct: 279 QLDGFEATK 287
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/68 (72%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMAR S MD
Sbjct: 194 TGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPS----IIFMD 249
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 250 EIDSIGSS 257
>gi|392881838|gb|AFM89751.1| 26S protease regulatory subunit 8-like protein [Callorhinchus
milii]
Length = 406
Score = 504 bits (1299), Expect = e-140, Method: Compositional matrix adjust.
Identities = 251/305 (82%), Positives = 263/305 (86%), Gaps = 29/305 (9%)
Query: 74 EAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGS 133
E K G + YY++KIEELQL V +K QNLRRLQAQRNELNAKVRMLREELQLLQEQGS
Sbjct: 12 EGGKGGTGLRQYYLSKIEELQLTVNDKSQNLRRLQAQRNELNAKVRMLREELQLLQEQGS 71
Query: 134 YVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKV 193
YVGEVV+ MDKKKVLVKVHPEGKFVVD+DKNIDINDVTPNCRVALRN+SYTLHKILPNKV
Sbjct: 72 YVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKV 131
Query: 194 DPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGP 253
DPLVSLMMVEKVPDSTYEM+GGLD QIKEIKEVIELPVKHPELF+ALGIAQPKGVLLYGP
Sbjct: 132 DPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGP 191
Query: 254 PGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLL 313
PGTGKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMA
Sbjct: 192 PGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMA------------- 238
Query: 314 FWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDG 373
REHAPSIIFMDEIDSIGSSR+E GSGGDSEVQRTMLELLNQLDG
Sbjct: 239 ----------------REHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDG 282
Query: 374 FEATK 378
FEATK
Sbjct: 283 FEATK 287
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/68 (72%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMAR S MD
Sbjct: 194 TGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPS----IIFMD 249
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 250 EIDSIGSS 257
>gi|156407884|ref|XP_001641587.1| predicted protein [Nematostella vectensis]
gi|156228726|gb|EDO49524.1| predicted protein [Nematostella vectensis]
Length = 398
Score = 501 bits (1290), Expect = e-139, Method: Compositional matrix adjust.
Identities = 252/305 (82%), Positives = 263/305 (86%), Gaps = 29/305 (9%)
Query: 74 EAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGS 133
E K EG + YY+TKIEELQL+V EK +NLRRL+AQRNELNAKVRMLREELQLLQEQGS
Sbjct: 4 EVEKQHEGIQQYYITKIEELQLVVTEKIKNLRRLEAQRNELNAKVRMLREELQLLQEQGS 63
Query: 134 YVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKV 193
YVGEVVKPMDKKKVLVKVHPEGKFVVDIDK ID+ +VTPNCRVALRN+SYTLHKILPNKV
Sbjct: 64 YVGEVVKPMDKKKVLVKVHPEGKFVVDIDKGIDMAEVTPNCRVALRNDSYTLHKILPNKV 123
Query: 194 DPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGP 253
DPLVSLMMVEKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELF+ALGI QPKGVLLYGP
Sbjct: 124 DPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFEALGIDQPKGVLLYGP 183
Query: 254 PGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLL 313
PGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEG+RMVRELFVMA
Sbjct: 184 PGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMA------------- 230
Query: 314 FWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDG 373
REHAPSIIFMDEIDSIGSSR+E GSGGDSEVQRTMLELLNQLDG
Sbjct: 231 ----------------REHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDG 274
Query: 374 FEATK 378
FEATK
Sbjct: 275 FEATK 279
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/68 (73%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHTECTFIRVSGSELVQKFIGEG+RMVRELFVMAR S MD
Sbjct: 186 TGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPS----IIFMD 241
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 242 EIDSIGSS 249
>gi|390343858|ref|XP_784151.3| PREDICTED: 26S protease regulatory subunit 8-like
[Strongylocentrotus purpuratus]
Length = 422
Score = 500 bits (1288), Expect = e-139, Method: Compositional matrix adjust.
Identities = 252/309 (81%), Positives = 268/309 (86%), Gaps = 30/309 (9%)
Query: 70 MDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQ 129
M+V+E+ + +G + YY+TKIEELQ++V +K QNLRRL+AQRNELNAKVRMLREELQLLQ
Sbjct: 25 MEVEESGRK-DGIQRYYITKIEELQMVVTDKTQNLRRLEAQRNELNAKVRMLREELQLLQ 83
Query: 130 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKIL 189
EQGS+VGEVVK MDKKKVLVKVHPEGKFVVDIDK+IDINDV PNCRVALRN+S+TLHKIL
Sbjct: 84 EQGSHVGEVVKAMDKKKVLVKVHPEGKFVVDIDKSIDINDVQPNCRVALRNDSHTLHKIL 143
Query: 190 PNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVL 249
PNKVDPLVSLMMVEKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELFDALGIAQPKGVL
Sbjct: 144 PNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVL 203
Query: 250 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAH 309
LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA
Sbjct: 204 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA--------- 254
Query: 310 HPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN 369
REHAPSIIFMDEIDSIGS+RIE SGGDSEVQRTMLELLN
Sbjct: 255 --------------------REHAPSIIFMDEIDSIGSTRIEGSSGGDSEVQRTMLELLN 294
Query: 370 QLDGFEATK 378
QLDGFEATK
Sbjct: 295 QLDGFEATK 303
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/46 (97%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR
Sbjct: 210 TGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 255
>gi|260787763|ref|XP_002588921.1| hypothetical protein BRAFLDRAFT_125428 [Branchiostoma floridae]
gi|229274093|gb|EEN44932.1| hypothetical protein BRAFLDRAFT_125428 [Branchiostoma floridae]
Length = 405
Score = 496 bits (1278), Expect = e-138, Method: Compositional matrix adjust.
Identities = 251/307 (81%), Positives = 264/307 (85%), Gaps = 30/307 (9%)
Query: 70 MDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQ 129
M+VD+ K EG + Y+ KIE L+L VAE+ QNLRRL+AQRNELNAKVRMLREELQLLQ
Sbjct: 8 MEVDQENKK-EGIQLYFQNKIEGLELEVAERTQNLRRLEAQRNELNAKVRMLREELQLLQ 66
Query: 130 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKIL 189
EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVD+DK IDINDVTPNCRVALRN+SYTLHKIL
Sbjct: 67 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDVDKAIDINDVTPNCRVALRNDSYTLHKIL 126
Query: 190 PNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVL 249
PNKVDPLVSLMMVEKVPDSTYEM+GGLD QIKEIKEVIELPVKHPELF+ALGIAQPKGVL
Sbjct: 127 PNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVL 186
Query: 250 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAH 309
LYGPPGTGKTLLARAVAHHT+CTFIRVSGSELVQKFIGEGSRMVRELFVMA
Sbjct: 187 LYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGSRMVRELFVMA--------- 237
Query: 310 HPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN 369
REHAPSIIFMDEIDSIGSSR+E GSGGDSEVQRTMLELLN
Sbjct: 238 --------------------REHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLN 277
Query: 370 QLDGFEA 376
QLDGFEA
Sbjct: 278 QLDGFEA 284
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/68 (73%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+CTFIRVSGSELVQKFIGEGSRMVRELFVMAR S MD
Sbjct: 193 TGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPS----IIFMD 248
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 249 EIDSIGSS 256
>gi|52630927|gb|AAU84927.1| putative 26S protease regulatory subunit 8 [Toxoptera citricida]
gi|326509375|dbj|BAJ91604.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 408
Score = 492 bits (1267), Expect = e-136, Method: Compositional matrix adjust.
Identities = 265/310 (85%), Positives = 270/310 (87%), Gaps = 30/310 (9%)
Query: 70 MDVDEAIKS-SEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLL 128
M+VD+ S +GFK YY TKIEEL L+VAEK NLRRLQAQRNELNAKVR+LREELQLL
Sbjct: 9 MEVDQNSSSRGDGFKSYYTTKIEELLLVVAEKSMNLRRLQAQRNELNAKVRLLREELQLL 68
Query: 129 QEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKI 188
QEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKI
Sbjct: 69 QEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKI 128
Query: 189 LPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGV 248
LPNKVDPLVSLMMVEKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELFDALGIAQPKGV
Sbjct: 129 LPNKVDPLVSLMMVEKVPDSTYEMVGGLDTQIKEIKEVIELPVKHPELFDALGIAQPKGV 188
Query: 249 LLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFA 308
LLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA
Sbjct: 189 LLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA-------- 240
Query: 309 HHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELL 368
REHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELL
Sbjct: 241 ---------------------REHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELL 279
Query: 369 NQLDGFEATK 378
NQLDGFEATK
Sbjct: 280 NQLDGFEATK 289
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/68 (75%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR S MD
Sbjct: 196 TGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPS----IIFMD 251
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 252 EIDSIGSS 259
>gi|193709132|ref|XP_001943740.1| PREDICTED: 26S protease regulatory subunit 8-like [Acyrthosiphon
pisum]
Length = 408
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 265/310 (85%), Positives = 270/310 (87%), Gaps = 30/310 (9%)
Query: 70 MDVDEAIKS-SEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLL 128
M+VD+ S +GFK YY TKIEEL L+VAEK NLRRLQAQRNELNAKVR+LREELQLL
Sbjct: 9 MEVDQNSGSRGDGFKSYYTTKIEELLLVVAEKSMNLRRLQAQRNELNAKVRLLREELQLL 68
Query: 129 QEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKI 188
QEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKI
Sbjct: 69 QEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKI 128
Query: 189 LPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGV 248
LPNKVDPLVSLMMVEKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELFDALGIAQPKGV
Sbjct: 129 LPNKVDPLVSLMMVEKVPDSTYEMVGGLDTQIKEIKEVIELPVKHPELFDALGIAQPKGV 188
Query: 249 LLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFA 308
LLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA
Sbjct: 189 LLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA-------- 240
Query: 309 HHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELL 368
REHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELL
Sbjct: 241 ---------------------REHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELL 279
Query: 369 NQLDGFEATK 378
NQLDGFEATK
Sbjct: 280 NQLDGFEATK 289
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/68 (75%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR S MD
Sbjct: 196 TGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPS----IIFMD 251
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 252 EIDSIGSS 259
>gi|215259783|gb|ACJ64383.1| 26S protease regulatory subunit 8 [Culex tarsalis]
Length = 267
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 250/293 (85%), Positives = 253/293 (86%), Gaps = 31/293 (10%)
Query: 70 MDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQ 129
MDVD + EGF+ YY+ KIEELQLIVAEK QNLRRLQAQRNELNAKVRMLREELQLLQ
Sbjct: 6 MDVDS--QKGEGFRSYYIQKIEELQLIVAEKNQNLRRLQAQRNELNAKVRMLREELQLLQ 63
Query: 130 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKIL 189
EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKIL
Sbjct: 64 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKIL 123
Query: 190 PNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVL 249
PNKVDPLVSLMMVEKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELFDALGIAQPKGVL
Sbjct: 124 PNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVL 183
Query: 250 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAH 309
LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGE SRMVRELFVMA
Sbjct: 184 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGERSRMVRELFVMA--------- 234
Query: 310 HPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQR 362
REHAPSIIFMDEIDSIGSSRIESG GGDSEVQR
Sbjct: 235 --------------------REHAPSIIFMDEIDSIGSSRIESGGGGDSEVQR 267
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/68 (73%), Positives = 53/68 (77%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHTECTFIRVSGSELVQKFIGE SRMVRELFVMAR S MD
Sbjct: 190 TGKTLLARAVAHHTECTFIRVSGSELVQKFIGERSRMVRELFVMAREHAPS----IIFMD 245
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 246 EIDSIGSS 253
>gi|358342186|dbj|GAA49709.1| 26S proteasome regulatory subunit T6, partial [Clonorchis sinensis]
Length = 666
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 239/298 (80%), Positives = 256/298 (85%), Gaps = 29/298 (9%)
Query: 78 SSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGE 137
+++G K YY+ KI+E Q IV EK QNLRRL+AQRNELNAKVRMLREELQLLQE GSYVGE
Sbjct: 36 TTDGIKNYYMNKIDEHQFIVTEKLQNLRRLEAQRNELNAKVRMLREELQLLQELGSYVGE 95
Query: 138 VVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLV 197
VVK MDKKKVLVKV PEGKFVVDIDKNIDI+ ++PNCRVALRNESYTLHKILP+K+DPLV
Sbjct: 96 VVKAMDKKKVLVKVQPEGKFVVDIDKNIDISQISPNCRVALRNESYTLHKILPSKIDPLV 155
Query: 198 SLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTG 257
SLMMVEKVPDSTYEM+GGLD QIKEIKEVIELPVKHPELF+ALGIAQPKGVLLYGPPGTG
Sbjct: 156 SLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTG 215
Query: 258 KTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSL 317
KTLLARAVAHHTECTFIRVSGSELVQKFIGEG+RMVRELFVMA
Sbjct: 216 KTLLARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMA----------------- 258
Query: 318 LTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
REHAPSIIFMDE+DSIGS+R+ES SGGDSEVQRTMLELLNQLDGFE
Sbjct: 259 ------------REHAPSIIFMDEVDSIGSTRVESSSGGDSEVQRTMLELLNQLDGFE 304
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/51 (88%), Positives = 47/51 (92%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
+GKTLLARAVAHHTECTFIRVSGSELVQKFIGEG+RMVRELFVMAR S
Sbjct: 214 TGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPS 264
>gi|387017826|gb|AFJ51031.1| 26S protease regulatory subunit 8-like [Crotalus adamanteus]
Length = 406
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 254/309 (82%), Positives = 268/309 (86%), Gaps = 30/309 (9%)
Query: 70 MDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQ 129
MD+DE K G + YY++KIEELQLIV +K QNLRRLQAQRNELNAKVR+LREELQLLQ
Sbjct: 9 MDLDEG-KGGTGLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQ 67
Query: 130 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKIL 189
EQGSYVGEVV+ MDKKKVLVKVHPEGKFVVD+DKNIDINDVTPNCRVALRN+SYTLHKIL
Sbjct: 68 EQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKIL 127
Query: 190 PNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVL 249
PNKVDPLVSLMMVEKVPDSTYEM+GGLD QIKEIKEVIELPVKHPELF+ALGIAQPKGVL
Sbjct: 128 PNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVL 187
Query: 250 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAH 309
LYGPPGTGKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMA
Sbjct: 188 LYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMA--------- 238
Query: 310 HPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN 369
REHAPSIIFMDEIDSIGSSR+E GSGGDSEVQRTMLELLN
Sbjct: 239 --------------------REHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLN 278
Query: 370 QLDGFEATK 378
QLDGFEATK
Sbjct: 279 QLDGFEATK 287
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/68 (72%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMAR S MD
Sbjct: 194 TGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPS----IIFMD 249
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 250 EIDSIGSS 257
>gi|443717941|gb|ELU08778.1| hypothetical protein CAPTEDRAFT_183959 [Capitella teleta]
Length = 406
Score = 480 bits (1235), Expect = e-133, Method: Compositional matrix adjust.
Identities = 255/308 (82%), Positives = 270/308 (87%), Gaps = 31/308 (10%)
Query: 70 MDVDEAIKSS--EGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQL 127
M++DEA + + EG K YYV+KIEELQL+V+ K QNLRRL+AQRNELNAKVR+LREELQL
Sbjct: 6 MEIDEAGERTNKEGIKQYYVSKIEELQLVVSGKTQNLRRLEAQRNELNAKVRLLREELQL 65
Query: 128 LQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHK 187
LQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVD+DKNIDINDVTPNCRVALRN+SYTLHK
Sbjct: 66 LQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDLDKNIDINDVTPNCRVALRNDSYTLHK 125
Query: 188 ILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKG 247
ILPNKVDPLVSLMMVEKVPDSTY+MVGGLD QIKEIKEVIELPVKHPELF+ALGIAQPKG
Sbjct: 126 ILPNKVDPLVSLMMVEKVPDSTYDMVGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKG 185
Query: 248 VLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAF 307
VLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA
Sbjct: 186 VLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA------- 238
Query: 308 AHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLEL 367
REHAPSIIFMDEIDSIGS+R+ESGSGGDSEVQRTMLEL
Sbjct: 239 ----------------------REHAPSIIFMDEIDSIGSTRLESGSGGDSEVQRTMLEL 276
Query: 368 LNQLDGFE 375
LNQLDGFE
Sbjct: 277 LNQLDGFE 284
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/46 (97%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR
Sbjct: 194 TGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 239
>gi|327275516|ref|XP_003222519.1| PREDICTED: 26S protease regulatory subunit 8-like [Anolis
carolinensis]
Length = 414
Score = 479 bits (1232), Expect = e-132, Method: Compositional matrix adjust.
Identities = 257/323 (79%), Positives = 274/323 (84%), Gaps = 32/323 (9%)
Query: 56 ARCKGSSRGTEFFTMDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELN 115
A+ K + G E M++DE K G + YY++KIEELQLIV +K QNLRRLQAQRNELN
Sbjct: 5 AKGKMAVEGPE--QMELDEG-KGGTGLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELN 61
Query: 116 AKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCR 175
AKVR+LREELQLLQEQGSYVGEVV+ MDKKKVLVKVHPEGKFVVD+DKNIDINDVTPNCR
Sbjct: 62 AKVRLLREELQLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCR 121
Query: 176 VALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPE 235
VALRN+SYTLHKILPNKVDPLVSLMMVEKVPDSTYEM+GGLD QIKEIKEVIELPVKHPE
Sbjct: 122 VALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPE 181
Query: 236 LFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRE 295
LF+ALGIAQPKGVLLYGPPGTGKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRE
Sbjct: 182 LFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRE 241
Query: 296 LFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSG 355
LFVMA REHAPSIIFMDEIDSIGSSR+E GSG
Sbjct: 242 LFVMA-----------------------------REHAPSIIFMDEIDSIGSSRLEGGSG 272
Query: 356 GDSEVQRTMLELLNQLDGFEATK 378
GDSEVQRTMLELLNQLDGFEATK
Sbjct: 273 GDSEVQRTMLELLNQLDGFEATK 295
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/68 (72%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMAR S MD
Sbjct: 202 TGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPS----IIFMD 257
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 258 EIDSIGSS 265
>gi|51230594|ref|NP_001003740.1| 26S protease regulatory subunit 8 [Danio rerio]
gi|50603847|gb|AAH78375.1| Proteasome (prosome, macropain) 26S subunit, ATPase, 5 [Danio
rerio]
gi|182891110|gb|AAI65834.1| Psmc5 protein [Danio rerio]
Length = 406
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 252/309 (81%), Positives = 268/309 (86%), Gaps = 30/309 (9%)
Query: 70 MDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQ 129
MD++++ K G + YY++KIEELQL V EK QNLRRLQAQRNELNAKVR+LREELQLLQ
Sbjct: 9 MDIEDS-KGGSGLRQYYLSKIEELQLTVNEKSQNLRRLQAQRNELNAKVRLLREELQLLQ 67
Query: 130 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKIL 189
EQGSYVGEVV+ MDKKKVLVKVHPEGKFVVD+DKNIDINDVTPNCRVALRN+SYTLHKIL
Sbjct: 68 EQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKIL 127
Query: 190 PNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVL 249
PNKVDPLVSLMMVEKVPDSTYEM+GGLD QIKEIKEVIELPVKHPELF+ALGIAQPKGVL
Sbjct: 128 PNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVL 187
Query: 250 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAH 309
LYGPPGTGKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMA
Sbjct: 188 LYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMA--------- 238
Query: 310 HPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN 369
REHAPSIIFMDEIDSIGSSR+E GSGGDSEVQRTMLELLN
Sbjct: 239 --------------------REHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLN 278
Query: 370 QLDGFEATK 378
QLDGFEATK
Sbjct: 279 QLDGFEATK 287
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/68 (72%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMAR S MD
Sbjct: 194 TGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPS----IIFMD 249
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 250 EIDSIGSS 257
>gi|417400379|gb|JAA47139.1| Putative 26s proteasome regulatory complex atpase rpt2 [Desmodus
rotundus]
Length = 406
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 253/309 (81%), Positives = 269/309 (87%), Gaps = 30/309 (9%)
Query: 70 MDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQ 129
M+++E KS G + YY++KIEELQLIV +K QNLRRLQAQRNELNAKVR+LREELQLLQ
Sbjct: 9 MELEEG-KSGSGLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQ 67
Query: 130 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKIL 189
EQGSYVGEVV+ MDKKKVLVKVHPEGKFVVD+DKNIDINDVTPNCRVALRN+SYTLHKIL
Sbjct: 68 EQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKIL 127
Query: 190 PNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVL 249
PNKVDPLVSLMMVEKVPDSTYEM+GGLD QIKEIKEVIELPVKHPELF+ALGIAQPKGVL
Sbjct: 128 PNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVL 187
Query: 250 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAH 309
LYGPPGTGKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMA
Sbjct: 188 LYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMA--------- 238
Query: 310 HPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN 369
REHAPSIIFMDEIDSIGSSR+E GSGGDSEVQRTMLELLN
Sbjct: 239 --------------------REHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLN 278
Query: 370 QLDGFEATK 378
QLDGFEATK
Sbjct: 279 QLDGFEATK 287
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/68 (72%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMAR S MD
Sbjct: 194 TGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPS----IIFMD 249
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 250 EIDSIGSS 257
>gi|326933955|ref|XP_003213063.1| PREDICTED: 26S protease regulatory subunit 8-like [Meleagris
gallopavo]
gi|363743351|ref|XP_425834.3| PREDICTED: 26S protease regulatory subunit 8 [Gallus gallus]
Length = 411
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 253/309 (81%), Positives = 268/309 (86%), Gaps = 30/309 (9%)
Query: 70 MDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQ 129
M++D+ K G + YY++KIEELQLIV EK QNLRRLQAQRNELNAKVR+LREELQLLQ
Sbjct: 14 MEMDDG-KGGTGLRQYYLSKIEELQLIVNEKSQNLRRLQAQRNELNAKVRLLREELQLLQ 72
Query: 130 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKIL 189
EQGSYVGEVV+ MDKKKVLVKVHPEGKFVVD+DKNIDINDVTPNCRVALRN+SYTLHKIL
Sbjct: 73 EQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKIL 132
Query: 190 PNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVL 249
PNKVDPLVSLMMVEKVPDSTYEM+GGLD QIKEIKEVIELPVKHPELF+ALGIAQPKGVL
Sbjct: 133 PNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVL 192
Query: 250 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAH 309
LYGPPGTGKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMA
Sbjct: 193 LYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMA--------- 243
Query: 310 HPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN 369
REHAPSIIFMDEIDSIGSSR+E GSGGDSEVQRTMLELLN
Sbjct: 244 --------------------REHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLN 283
Query: 370 QLDGFEATK 378
QLDGFEATK
Sbjct: 284 QLDGFEATK 292
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/68 (72%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMAR S MD
Sbjct: 199 TGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPS----IIFMD 254
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 255 EIDSIGSS 262
>gi|350536363|ref|NP_001232710.1| putative proteasome 26S subunit ATPase 5 variant 1 [Taeniopygia
guttata]
gi|197128441|gb|ACH44939.1| putative proteasome 26S subunit ATPase 5 variant 1 [Taeniopygia
guttata]
Length = 411
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 253/309 (81%), Positives = 268/309 (86%), Gaps = 30/309 (9%)
Query: 70 MDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQ 129
M++D+ K G + YY++KIEELQLIV EK QNLRRLQAQRNELNAKVR+LREELQLLQ
Sbjct: 14 MEMDDG-KGGSGLRQYYLSKIEELQLIVNEKSQNLRRLQAQRNELNAKVRLLREELQLLQ 72
Query: 130 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKIL 189
EQGSYVGEVV+ MDKKKVLVKVHPEGKFVVD+DKNIDINDVTPNCRVALRN+SYTLHKIL
Sbjct: 73 EQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKIL 132
Query: 190 PNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVL 249
PNKVDPLVSLMMVEKVPDSTYEM+GGLD QIKEIKEVIELPVKHPELF+ALGIAQPKGVL
Sbjct: 133 PNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVL 192
Query: 250 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAH 309
LYGPPGTGKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMA
Sbjct: 193 LYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMA--------- 243
Query: 310 HPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN 369
REHAPSIIFMDEIDSIGSSR+E GSGGDSEVQRTMLELLN
Sbjct: 244 --------------------REHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLN 283
Query: 370 QLDGFEATK 378
QLDGFEATK
Sbjct: 284 QLDGFEATK 292
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/68 (72%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMAR S MD
Sbjct: 199 TGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPS----IIFMD 254
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 255 EIDSIGSS 262
>gi|50604137|gb|AAH77223.1| Unknown (protein for MGC:79055) [Xenopus laevis]
Length = 414
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 254/323 (78%), Positives = 275/323 (85%), Gaps = 32/323 (9%)
Query: 56 ARCKGSSRGTEFFTMDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELN 115
A K ++ G E M++DE+ + G + YY++KIE+LQL+V +K QNLRRLQAQRNELN
Sbjct: 5 AEYKAAADGME--QMEMDES-RGGTGLRQYYLSKIEDLQLVVNDKSQNLRRLQAQRNELN 61
Query: 116 AKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCR 175
AKVR+LREELQLLQEQGSYVGEVV+ MDKKKVLVKVHPEGKFVVD+DKNIDINDVTPNCR
Sbjct: 62 AKVRLLREELQLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCR 121
Query: 176 VALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPE 235
VALRN+SYTLHKILPNKVDPLVSLMMVEKVPDSTYEM+GGLD QIKEIKEVIELPVKHPE
Sbjct: 122 VALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPE 181
Query: 236 LFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRE 295
LF+ALGIAQPKGVLLYGPPGTGKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRE
Sbjct: 182 LFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRE 241
Query: 296 LFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSG 355
LFVMA REHAPSIIFMDEIDSIGSSR+E GSG
Sbjct: 242 LFVMA-----------------------------REHAPSIIFMDEIDSIGSSRLEGGSG 272
Query: 356 GDSEVQRTMLELLNQLDGFEATK 378
GDSEVQRTMLELLNQLDGFEATK
Sbjct: 273 GDSEVQRTMLELLNQLDGFEATK 295
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/68 (72%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMAR S MD
Sbjct: 202 TGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPS----IIFMD 257
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 258 EIDSIGSS 265
>gi|344285251|ref|XP_003414376.1| PREDICTED: 26S protease regulatory subunit 8-like [Loxodonta
africana]
Length = 406
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 252/309 (81%), Positives = 269/309 (87%), Gaps = 30/309 (9%)
Query: 70 MDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQ 129
M+++E K+ G + YY++KIEELQLIV +K QNLRRLQAQRNELNAKVR+LREELQLLQ
Sbjct: 9 MELEEG-KAGSGLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQ 67
Query: 130 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKIL 189
EQGSYVGEVV+ MDKKKVLVKVHPEGKFVVD+DKNIDINDVTPNCRVALRN+SYTLHKIL
Sbjct: 68 EQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKIL 127
Query: 190 PNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVL 249
PNKVDPLVSLMMVEKVPDSTYEM+GGLD QIKEIKEVIELPVKHPELF+ALGIAQPKGVL
Sbjct: 128 PNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVL 187
Query: 250 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAH 309
LYGPPGTGKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMA
Sbjct: 188 LYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMA--------- 238
Query: 310 HPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN 369
REHAPSIIFMDEIDSIGSSR+E GSGGDSEVQRTMLELLN
Sbjct: 239 --------------------REHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLN 278
Query: 370 QLDGFEATK 378
QLDGFEATK
Sbjct: 279 QLDGFEATK 287
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/68 (72%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMAR S MD
Sbjct: 194 TGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPS----IIFMD 249
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 250 EIDSIGSS 257
>gi|312596881|ref|NP_001186092.1| 26S protease regulatory subunit 8 isoform 2 [Homo sapiens]
gi|350536989|ref|NP_001233453.1| 26S protease regulatory subunit 8 [Pan troglodytes]
gi|354479435|ref|XP_003501915.1| PREDICTED: 26S protease regulatory subunit 8-like [Cricetulus
griseus]
gi|397480230|ref|XP_003811390.1| PREDICTED: 26S protease regulatory subunit 8 isoform 2 [Pan
paniscus]
gi|403303764|ref|XP_003942493.1| PREDICTED: 26S protease regulatory subunit 8 isoform 2 [Saimiri
boliviensis boliviensis]
gi|426347151|ref|XP_004041222.1| PREDICTED: 26S protease regulatory subunit 8 isoform 2 [Gorilla
gorilla gorilla]
gi|1262435|emb|CAA61864.1| put. 26S protease subunit [Sus scrofa]
gi|119614676|gb|EAW94270.1| proteasome (prosome, macropain) 26S subunit, ATPase, 5, isoform
CRA_b [Homo sapiens]
gi|119614677|gb|EAW94271.1| proteasome (prosome, macropain) 26S subunit, ATPase, 5, isoform
CRA_b [Homo sapiens]
gi|158254952|dbj|BAF83447.1| unnamed protein product [Homo sapiens]
gi|343958700|dbj|BAK63205.1| 26S protease regulatory subunit 8 [Pan troglodytes]
gi|444726994|gb|ELW67504.1| 26S protease regulatory subunit 8 [Tupaia chinensis]
Length = 398
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 252/309 (81%), Positives = 269/309 (87%), Gaps = 30/309 (9%)
Query: 70 MDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQ 129
M+++E K+ G + YY++KIEELQLIV +K QNLRRLQAQRNELNAKVR+LREELQLLQ
Sbjct: 1 MELEEG-KAGSGLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQ 59
Query: 130 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKIL 189
EQGSYVGEVV+ MDKKKVLVKVHPEGKFVVD+DKNIDINDVTPNCRVALRN+SYTLHKIL
Sbjct: 60 EQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKIL 119
Query: 190 PNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVL 249
PNKVDPLVSLMMVEKVPDSTYEM+GGLD QIKEIKEVIELPVKHPELF+ALGIAQPKGVL
Sbjct: 120 PNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVL 179
Query: 250 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAH 309
LYGPPGTGKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMA
Sbjct: 180 LYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMA--------- 230
Query: 310 HPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN 369
REHAPSIIFMDEIDSIGSSR+E GSGGDSEVQRTMLELLN
Sbjct: 231 --------------------REHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLN 270
Query: 370 QLDGFEATK 378
QLDGFEATK
Sbjct: 271 QLDGFEATK 279
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/68 (72%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMAR S MD
Sbjct: 186 TGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPS----IIFMD 241
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 242 EIDSIGSS 249
>gi|7110703|ref|NP_032976.1| 26S protease regulatory subunit 8 [Mus musculus]
gi|13592141|ref|NP_112411.1| 26S protease regulatory subunit 8 [Rattus norvegicus]
gi|24497435|ref|NP_002796.4| 26S protease regulatory subunit 8 isoform 1 [Homo sapiens]
gi|27806101|ref|NP_776866.1| 26S protease regulatory subunit 8 [Bos taurus]
gi|47522792|ref|NP_999148.1| 26S protease regulatory subunit 8 [Sus scrofa]
gi|386782115|ref|NP_001248230.1| 26S protease regulatory subunit 8 [Macaca mulatta]
gi|73965193|ref|XP_537597.2| PREDICTED: 26S protease regulatory subunit 8 isoform 1 [Canis lupus
familiaris]
gi|149723381|ref|XP_001500958.1| PREDICTED: 26S protease regulatory subunit 8 [Equus caballus]
gi|291406361|ref|XP_002719523.1| PREDICTED: protease (prosome, macropain) 26S subunit, ATPase 5-like
[Oryctolagus cuniculus]
gi|296201787|ref|XP_002806873.1| PREDICTED: LOW QUALITY PROTEIN: 26S protease regulatory subunit 8
[Callithrix jacchus]
gi|301778301|ref|XP_002924560.1| PREDICTED: 26S protease regulatory subunit 8-like [Ailuropoda
melanoleuca]
gi|332243114|ref|XP_003270727.1| PREDICTED: 26S protease regulatory subunit 8 [Nomascus leucogenys]
gi|348560347|ref|XP_003465975.1| PREDICTED: 26S protease regulatory subunit 8-like [Cavia porcellus]
gi|395826085|ref|XP_003786250.1| PREDICTED: 26S protease regulatory subunit 8 [Otolemur garnettii]
gi|397480228|ref|XP_003811389.1| PREDICTED: 26S protease regulatory subunit 8 isoform 1 [Pan
paniscus]
gi|403303762|ref|XP_003942492.1| PREDICTED: 26S protease regulatory subunit 8 isoform 1 [Saimiri
boliviensis boliviensis]
gi|410981502|ref|XP_003997107.1| PREDICTED: 26S protease regulatory subunit 8 [Felis catus]
gi|426347149|ref|XP_004041221.1| PREDICTED: 26S protease regulatory subunit 8 isoform 1 [Gorilla
gorilla gorilla]
gi|49065781|sp|P62197.1|PRS8_PIG RecName: Full=26S protease regulatory subunit 8; AltName: Full=26S
proteasome AAA-ATPase subunit RPT6; AltName:
Full=Proteasome 26S subunit ATPase 5; AltName:
Full=Proteasome subunit p45; AltName: Full=Tat-binding
protein homolog 10; Short=TBP10; AltName: Full=p45/SUG
gi|49065782|sp|P62198.1|PRS8_RAT RecName: Full=26S protease regulatory subunit 8; AltName: Full=26S
proteasome AAA-ATPase subunit RPT6; AltName:
Full=Proteasome 26S subunit ATPase 5; AltName:
Full=Proteasome subunit p45; AltName: Full=Thyroid
hormone receptor-interacting protein 1; Short=TRIP1;
AltName: Full=p45/SUG
gi|49065819|sp|P62195.1|PRS8_HUMAN RecName: Full=26S protease regulatory subunit 8; AltName: Full=26S
proteasome AAA-ATPase subunit RPT6; AltName:
Full=Proteasome 26S subunit ATPase 5; AltName:
Full=Proteasome subunit p45; AltName: Full=Thyroid
hormone receptor-interacting protein 1; Short=TRIP1;
AltName: Full=p45/SUG
gi|49065820|sp|P62196.1|PRS8_MOUSE RecName: Full=26S protease regulatory subunit 8; AltName: Full=26S
proteasome AAA-ATPase subunit RPT6; AltName:
Full=Proteasome 26S subunit ATPase 5; AltName:
Full=Proteasome subunit p45; AltName: Full=p45/SUG;
Short=mSUG1
gi|68630545|sp|P62194.1|PRS8_BOVIN RecName: Full=26S protease regulatory subunit 8; AltName: Full=26S
proteasome AAA-ATPase subunit RPT6; AltName:
Full=Proteasome 26S subunit ATPase 5; AltName:
Full=Proteasome subunit p45; AltName: Full=p45/SUG
gi|1165125|emb|CAA90961.1| mSUG1 protein [Mus musculus]
gi|1262433|emb|CAA61863.1| 26S protease subunit [Sus scrofa]
gi|1395177|dbj|BAA11938.1| proteasomal ATPase (rat SUG1) [Rattus norvegicus]
gi|2564003|dbj|BAA22933.1| proteasome p45/SUG [Rattus norvegicus]
gi|3193258|gb|AAC19266.1| proteasome subunit SUG1 [Bos taurus]
gi|12804959|gb|AAH01932.1| Proteasome (prosome, macropain) 26S subunit, ATPase, 5 [Homo
sapiens]
gi|32425744|gb|AAH02367.3| Proteasome (prosome, macropain) 26S subunit, ATPase, 5 [Homo
sapiens]
gi|37231718|gb|AAH58462.1| Proteasome (prosome, macropain) 26S subunit, ATPase, 5 [Rattus
norvegicus]
gi|74183188|dbj|BAE22539.1| unnamed protein product [Mus musculus]
gi|74216976|dbj|BAE26599.1| unnamed protein product [Mus musculus]
gi|90075232|dbj|BAE87296.1| unnamed protein product [Macaca fascicularis]
gi|119614678|gb|EAW94272.1| proteasome (prosome, macropain) 26S subunit, ATPase, 5, isoform
CRA_c [Homo sapiens]
gi|123982762|gb|ABM83122.1| proteasome (prosome, macropain) 26S subunit, ATPase, 5 [synthetic
construct]
gi|123997431|gb|ABM86317.1| proteasome (prosome, macropain) 26S subunit, ATPase, 5 [synthetic
construct]
gi|148702335|gb|EDL34282.1| protease (prosome, macropain) 26S subunit, ATPase 5, isoform CRA_a
[Mus musculus]
gi|148877455|gb|AAI46196.1| Proteasome (prosome, macropain) 26S subunit, ATPase, 5 [Bos taurus]
gi|158257188|dbj|BAF84567.1| unnamed protein product [Homo sapiens]
gi|208967154|dbj|BAG73591.1| proteasome (prosome, macropain) 26S subunit ATPase 5 [synthetic
construct]
gi|296476226|tpg|DAA18341.1| TPA: 26S protease regulatory subunit 8 [Bos taurus]
gi|335775624|gb|AEH58634.1| 26S protease regulatory subunit 8-like protein [Equus caballus]
gi|355568825|gb|EHH25106.1| hypothetical protein EGK_08868 [Macaca mulatta]
gi|380783143|gb|AFE63447.1| 26S protease regulatory subunit 8 isoform 1 [Macaca mulatta]
gi|383409287|gb|AFH27857.1| 26S protease regulatory subunit 8 isoform 1 [Macaca mulatta]
gi|410211024|gb|JAA02731.1| proteasome (prosome, macropain) 26S subunit, ATPase, 5 [Pan
troglodytes]
gi|410252506|gb|JAA14220.1| proteasome (prosome, macropain) 26S subunit, ATPase, 5 [Pan
troglodytes]
gi|410343433|gb|JAA40587.1| proteasome (prosome, macropain) 26S subunit, ATPase, 5 [Pan
troglodytes]
Length = 406
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 252/309 (81%), Positives = 269/309 (87%), Gaps = 30/309 (9%)
Query: 70 MDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQ 129
M+++E K+ G + YY++KIEELQLIV +K QNLRRLQAQRNELNAKVR+LREELQLLQ
Sbjct: 9 MELEEG-KAGSGLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQ 67
Query: 130 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKIL 189
EQGSYVGEVV+ MDKKKVLVKVHPEGKFVVD+DKNIDINDVTPNCRVALRN+SYTLHKIL
Sbjct: 68 EQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKIL 127
Query: 190 PNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVL 249
PNKVDPLVSLMMVEKVPDSTYEM+GGLD QIKEIKEVIELPVKHPELF+ALGIAQPKGVL
Sbjct: 128 PNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVL 187
Query: 250 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAH 309
LYGPPGTGKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMA
Sbjct: 188 LYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMA--------- 238
Query: 310 HPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN 369
REHAPSIIFMDEIDSIGSSR+E GSGGDSEVQRTMLELLN
Sbjct: 239 --------------------REHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLN 278
Query: 370 QLDGFEATK 378
QLDGFEATK
Sbjct: 279 QLDGFEATK 287
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/68 (72%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMAR S MD
Sbjct: 194 TGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPS----IIFMD 249
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 250 EIDSIGSS 257
>gi|976227|dbj|BAA07919.1| 26S proteasome subunit p45 [Homo sapiens]
gi|1096205|prf||2111282A 26S proteasome
Length = 406
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 251/309 (81%), Positives = 268/309 (86%), Gaps = 30/309 (9%)
Query: 70 MDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQ 129
M+++E K+ G + YY++KIEELQLIV +K QNLRRLQAQRNELNAKVR+LR ELQLLQ
Sbjct: 9 MELEEG-KAGSGLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLRRELQLLQ 67
Query: 130 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKIL 189
EQGSYVGEVV+ MDKKKVLVKVHPEGKFVVD+DKNIDINDVTPNCRVALRN+SYTLHKIL
Sbjct: 68 EQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKIL 127
Query: 190 PNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVL 249
PNKVDPLVSLMMVEKVPDSTYEM+GGLD QIKEIKEVIELPVKHPELF+ALGIAQPKGVL
Sbjct: 128 PNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVL 187
Query: 250 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAH 309
LYGPPGTGKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMA
Sbjct: 188 LYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMA--------- 238
Query: 310 HPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN 369
REHAPSIIFMDEIDSIGSSR+E GSGGDSEVQRTMLELLN
Sbjct: 239 --------------------REHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLN 278
Query: 370 QLDGFEATK 378
QLDGFEATK
Sbjct: 279 QLDGFEATK 287
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/68 (72%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMAR S MD
Sbjct: 194 TGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPS----IIFMD 249
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 250 EIDSIGSS 257
>gi|12846001|dbj|BAB26990.1| unnamed protein product [Mus musculus]
Length = 406
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 252/309 (81%), Positives = 269/309 (87%), Gaps = 30/309 (9%)
Query: 70 MDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQ 129
M+++E K+ G + YY++KIEELQLIV +K QNLRRLQAQRNELNAKVR+LREELQLLQ
Sbjct: 9 MELEEG-KAGSGLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQ 67
Query: 130 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKIL 189
EQGSYVGEVV+ MDKKKVLVKVHPEGKFVVD+DKNIDINDVTPNCRVALRN+SYTLHKIL
Sbjct: 68 EQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKIL 127
Query: 190 PNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVL 249
PNKVDPLVSLMMVEKVPDSTYEM+GGLD QIKEIKEVIELPVKHPELF+ALGIAQPKGVL
Sbjct: 128 PNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVL 187
Query: 250 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAH 309
LYGPPGTGKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMA
Sbjct: 188 LYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMA--------- 238
Query: 310 HPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN 369
REHAPSIIFMDEIDSIGSSR+E GSGGDSEVQRTMLELLN
Sbjct: 239 --------------------REHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLN 278
Query: 370 QLDGFEATK 378
QLDGFEATK
Sbjct: 279 QLDGFEATK 287
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/68 (72%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMAR S MD
Sbjct: 194 TGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPS----IIFMD 249
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 250 EIDSIGSS 257
>gi|426238259|ref|XP_004013072.1| PREDICTED: 26S protease regulatory subunit 8 [Ovis aries]
Length = 406
Score = 477 bits (1227), Expect = e-132, Method: Compositional matrix adjust.
Identities = 252/309 (81%), Positives = 269/309 (87%), Gaps = 30/309 (9%)
Query: 70 MDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQ 129
M+++E K+ G + YY++KIEELQLIV +K QNLRRLQAQRNELNAKVR+LREELQLLQ
Sbjct: 9 MELEEG-KTGSGLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQ 67
Query: 130 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKIL 189
EQGSYVGEVV+ MDKKKVLVKVHPEGKFVVD+DKNIDINDVTPNCRVALRN+SYTLHKIL
Sbjct: 68 EQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKIL 127
Query: 190 PNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVL 249
PNKVDPLVSLMMVEKVPDSTYEM+GGLD QIKEIKEVIELPVKHPELF+ALGIAQPKGVL
Sbjct: 128 PNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVL 187
Query: 250 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAH 309
LYGPPGTGKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMA
Sbjct: 188 LYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMA--------- 238
Query: 310 HPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN 369
REHAPSIIFMDEIDSIGSSR+E GSGGDSEVQRTMLELLN
Sbjct: 239 --------------------REHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLN 278
Query: 370 QLDGFEATK 378
QLDGFEATK
Sbjct: 279 QLDGFEATK 287
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/68 (72%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMAR S MD
Sbjct: 194 TGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPS----IIFMD 249
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 250 EIDSIGSS 257
>gi|334323133|ref|XP_001376943.2| PREDICTED: 26S protease regulatory subunit 8-like [Monodelphis
domestica]
gi|395532892|ref|XP_003768500.1| PREDICTED: 26S protease regulatory subunit 8 [Sarcophilus harrisii]
Length = 407
Score = 477 bits (1227), Expect = e-132, Method: Compositional matrix adjust.
Identities = 252/309 (81%), Positives = 269/309 (87%), Gaps = 30/309 (9%)
Query: 70 MDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQ 129
M+++E K+ G + YY++KIEELQLIV +K QNLRRLQAQRNELNAKVR+LREELQLLQ
Sbjct: 10 MELEEG-KAGSGLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQ 68
Query: 130 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKIL 189
EQGSYVGEVV+ MDKKKVLVKVHPEGKFVVD+DKNIDINDVTPNCRVALRN+SYTLHKIL
Sbjct: 69 EQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKIL 128
Query: 190 PNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVL 249
PNKVDPLVSLMMVEKVPDSTYEM+GGLD QIKEIKEVIELPVKHPELF+ALGIAQPKGVL
Sbjct: 129 PNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVL 188
Query: 250 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAH 309
LYGPPGTGKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMA
Sbjct: 189 LYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMA--------- 239
Query: 310 HPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN 369
REHAPSIIFMDEIDSIGSSR+E GSGGDSEVQRTMLELLN
Sbjct: 240 --------------------REHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLN 279
Query: 370 QLDGFEATK 378
QLDGFEATK
Sbjct: 280 QLDGFEATK 288
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/68 (72%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMAR S MD
Sbjct: 195 TGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPS----IIFMD 250
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 251 EIDSIGSS 258
>gi|54696318|gb|AAV38531.1| proteasome (prosome, macropain) 26S subunit, ATPase, 5 [synthetic
construct]
Length = 407
Score = 477 bits (1227), Expect = e-132, Method: Compositional matrix adjust.
Identities = 252/309 (81%), Positives = 269/309 (87%), Gaps = 30/309 (9%)
Query: 70 MDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQ 129
M+++E K+ G + YY++KIEELQLIV +K QNLRRLQAQRNELNAKVR+LREELQLLQ
Sbjct: 9 MELEEG-KAGSGLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQ 67
Query: 130 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKIL 189
EQGSYVGEVV+ MDKKKVLVKVHPEGKFVVD+DKNIDINDVTPNCRVALRN+SYTLHKIL
Sbjct: 68 EQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKIL 127
Query: 190 PNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVL 249
PNKVDPLVSLMMVEKVPDSTYEM+GGLD QIKEIKEVIELPVKHPELF+ALGIAQPKGVL
Sbjct: 128 PNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVL 187
Query: 250 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAH 309
LYGPPGTGKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMA
Sbjct: 188 LYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMA--------- 238
Query: 310 HPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN 369
REHAPSIIFMDEIDSIGSSR+E GSGGDSEVQRTMLELLN
Sbjct: 239 --------------------REHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLN 278
Query: 370 QLDGFEATK 378
QLDGFEATK
Sbjct: 279 QLDGFEATK 287
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/68 (72%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMAR S MD
Sbjct: 194 TGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPS----IIFMD 249
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 250 EIDSIGSS 257
>gi|149054556|gb|EDM06373.1| peptidase (prosome, macropain) 26S subunit, ATPase 5, isoform CRA_b
[Rattus norvegicus]
Length = 416
Score = 477 bits (1227), Expect = e-132, Method: Compositional matrix adjust.
Identities = 252/309 (81%), Positives = 269/309 (87%), Gaps = 30/309 (9%)
Query: 70 MDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQ 129
M+++E K+ G + YY++KIEELQLIV +K QNLRRLQAQRNELNAKVR+LREELQLLQ
Sbjct: 19 MELEEG-KAGSGLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQ 77
Query: 130 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKIL 189
EQGSYVGEVV+ MDKKKVLVKVHPEGKFVVD+DKNIDINDVTPNCRVALRN+SYTLHKIL
Sbjct: 78 EQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKIL 137
Query: 190 PNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVL 249
PNKVDPLVSLMMVEKVPDSTYEM+GGLD QIKEIKEVIELPVKHPELF+ALGIAQPKGVL
Sbjct: 138 PNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVL 197
Query: 250 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAH 309
LYGPPGTGKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMA
Sbjct: 198 LYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMA--------- 248
Query: 310 HPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN 369
REHAPSIIFMDEIDSIGSSR+E GSGGDSEVQRTMLELLN
Sbjct: 249 --------------------REHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLN 288
Query: 370 QLDGFEATK 378
QLDGFEATK
Sbjct: 289 QLDGFEATK 297
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/68 (72%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMAR S MD
Sbjct: 204 TGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPS----IIFMD 259
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 260 EIDSIGSS 267
>gi|431908879|gb|ELK12471.1| 26S protease regulatory subunit 8 [Pteropus alecto]
Length = 465
Score = 477 bits (1227), Expect = e-132, Method: Compositional matrix adjust.
Identities = 252/311 (81%), Positives = 270/311 (86%), Gaps = 30/311 (9%)
Query: 68 FTMDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQL 127
+M+++E K+ G + YY++KIEELQLIV +K QNLRRLQAQRNELNAKVR+LREELQL
Sbjct: 66 LSMELEEG-KAGSGLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQL 124
Query: 128 LQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHK 187
LQEQGSYVGEVV+ MDKKKVLVKVHPEGKFVVD+DKNIDINDVTPNCRVALRN+SYTLHK
Sbjct: 125 LQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHK 184
Query: 188 ILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKG 247
ILPNKVDPLVSLMMVEKVPDSTYEM+GGLD QIKEIKEVIELPVKHPELF+ALGIAQPKG
Sbjct: 185 ILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKG 244
Query: 248 VLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAF 307
VLLYGPPGTGKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMA
Sbjct: 245 VLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMA------- 297
Query: 308 AHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLEL 367
REHAPSIIFMDEIDSIGSSR+E GSGGDSEVQRTMLEL
Sbjct: 298 ----------------------REHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLEL 335
Query: 368 LNQLDGFEATK 378
LNQLDGFEATK
Sbjct: 336 LNQLDGFEATK 346
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 49/68 (72%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMAR S MD
Sbjct: 253 TGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPS----IIFMD 308
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 309 EIDSIGSS 316
>gi|440890860|gb|ELR44943.1| 26S protease regulatory subunit 8, partial [Bos grunniens mutus]
Length = 410
Score = 477 bits (1227), Expect = e-132, Method: Compositional matrix adjust.
Identities = 252/309 (81%), Positives = 269/309 (87%), Gaps = 30/309 (9%)
Query: 70 MDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQ 129
M+++E K+ G + YY++KIEELQLIV +K QNLRRLQAQRNELNAKVR+LREELQLLQ
Sbjct: 13 MELEEG-KAGSGLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQ 71
Query: 130 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKIL 189
EQGSYVGEVV+ MDKKKVLVKVHPEGKFVVD+DKNIDINDVTPNCRVALRN+SYTLHKIL
Sbjct: 72 EQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKIL 131
Query: 190 PNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVL 249
PNKVDPLVSLMMVEKVPDSTYEM+GGLD QIKEIKEVIELPVKHPELF+ALGIAQPKGVL
Sbjct: 132 PNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVL 191
Query: 250 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAH 309
LYGPPGTGKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMA
Sbjct: 192 LYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMA--------- 242
Query: 310 HPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN 369
REHAPSIIFMDEIDSIGSSR+E GSGGDSEVQRTMLELLN
Sbjct: 243 --------------------REHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLN 282
Query: 370 QLDGFEATK 378
QLDGFEATK
Sbjct: 283 QLDGFEATK 291
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/68 (72%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMAR S MD
Sbjct: 198 TGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPS----IIFMD 253
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 254 EIDSIGSS 261
>gi|62087652|dbj|BAD92273.1| proteasome 26S ATPase subunit 5 variant [Homo sapiens]
Length = 345
Score = 476 bits (1225), Expect = e-132, Method: Compositional matrix adjust.
Identities = 252/311 (81%), Positives = 270/311 (86%), Gaps = 30/311 (9%)
Query: 68 FTMDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQL 127
+ M+++E K+ G + YY++KIEELQLIV +K QNLRRLQAQRNELNAKVR+LREELQL
Sbjct: 3 YEMELEEG-KAGSGLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQL 61
Query: 128 LQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHK 187
LQEQGSYVGEVV+ MDKKKVLVKVHPEGKFVVD+DKNIDINDVTPNCRVALRN+SYTLHK
Sbjct: 62 LQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHK 121
Query: 188 ILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKG 247
ILPNKVDPLVSLMMVEKVPDSTYEM+GGLD QIKEIKEVIELPVKHPELF+ALGIAQPKG
Sbjct: 122 ILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKG 181
Query: 248 VLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAF 307
VLLYGPPGTGKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMA
Sbjct: 182 VLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMA------- 234
Query: 308 AHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLEL 367
REHAPSIIFMDEIDSIGSSR+E GSGGDSEVQRTMLEL
Sbjct: 235 ----------------------REHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLEL 272
Query: 368 LNQLDGFEATK 378
LNQLDGFEATK
Sbjct: 273 LNQLDGFEATK 283
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/68 (72%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMAR S MD
Sbjct: 190 TGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPS----IIFMD 245
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 246 EIDSIGSS 253
>gi|90078576|dbj|BAE88968.1| unnamed protein product [Macaca fascicularis]
Length = 398
Score = 476 bits (1224), Expect = e-131, Method: Compositional matrix adjust.
Identities = 251/309 (81%), Positives = 268/309 (86%), Gaps = 30/309 (9%)
Query: 70 MDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQ 129
M+++E K+ G + YY++KIEELQLIV +K QNLRRLQAQR ELNAKVR+LREELQLLQ
Sbjct: 1 MELEEG-KAGSGLRQYYLSKIEELQLIVNDKSQNLRRLQAQRTELNAKVRLLREELQLLQ 59
Query: 130 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKIL 189
EQGSYVGEVV+ MDKKKVLVKVHPEGKFVVD+DKNIDINDVTPNCRVALRN+SYTLHKIL
Sbjct: 60 EQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKIL 119
Query: 190 PNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVL 249
PNKVDPLVSLMMVEKVPDSTYEM+GGLD QIKEIKEVIELPVKHPELF+ALGIAQPKGVL
Sbjct: 120 PNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVL 179
Query: 250 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAH 309
LYGPPGTGKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMA
Sbjct: 180 LYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMA--------- 230
Query: 310 HPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN 369
REHAPSIIFMDEIDSIGSSR+E GSGGDSEVQRTMLELLN
Sbjct: 231 --------------------REHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLN 270
Query: 370 QLDGFEATK 378
QLDGFEATK
Sbjct: 271 QLDGFEATK 279
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/68 (72%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMAR S MD
Sbjct: 186 TGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPS----IIFMD 241
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 242 EIDSIGSS 249
>gi|45361563|ref|NP_989358.1| proteasome (prosome, macropain) 26S subunit, ATPase, 5 [Xenopus
(Silurana) tropicalis]
gi|39850038|gb|AAH64153.1| hypothetical protein MGC75584 [Xenopus (Silurana) tropicalis]
Length = 414
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 252/315 (80%), Positives = 270/315 (85%), Gaps = 30/315 (9%)
Query: 64 GTEFFTMDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLRE 123
G M++DE+ + G + YY++KIE+LQL+V +K QNLRRLQAQRNELNAKVR+LRE
Sbjct: 11 GDGMEQMEMDES-RGGIGLRQYYLSKIEDLQLVVNDKSQNLRRLQAQRNELNAKVRLLRE 69
Query: 124 ELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESY 183
ELQLLQEQGSYVGEVV+ MDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRN+SY
Sbjct: 70 ELQLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNDSY 129
Query: 184 TLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIA 243
TLHKILPNKVDPLVSLMMVEKVPDSTYEM+GGLD QIKEIKEVIELPVKHPELF+ALGIA
Sbjct: 130 TLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIA 189
Query: 244 QPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLK 303
QPKGVLLYGPPGTGKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMA
Sbjct: 190 QPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMA--- 246
Query: 304 KLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRT 363
REHAPSIIFMDEIDSIGSSR+E GSGGDSEVQRT
Sbjct: 247 --------------------------REHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRT 280
Query: 364 MLELLNQLDGFEATK 378
MLELLNQLDGFEATK
Sbjct: 281 MLELLNQLDGFEATK 295
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/68 (72%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMAR S MD
Sbjct: 202 TGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPS----IIFMD 257
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 258 EIDSIGSS 265
>gi|410896252|ref|XP_003961613.1| PREDICTED: 26S protease regulatory subunit 8-like [Takifugu
rubripes]
gi|47219715|emb|CAG12637.1| unnamed protein product [Tetraodon nigroviridis]
Length = 406
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 253/310 (81%), Positives = 267/310 (86%), Gaps = 30/310 (9%)
Query: 69 TMDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLL 128
M+V E+ K G + YY++KIEELQL V EK QNLRRLQAQRNELNAKVR+LREELQLL
Sbjct: 8 NMEVVES-KGGSGLRQYYLSKIEELQLTVNEKSQNLRRLQAQRNELNAKVRLLREELQLL 66
Query: 129 QEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKI 188
QEQGSYVGEVV+ MDKKKVLVKVHPEGKFVVD+DKNIDINDVTPNCRVALRN+SYTLHKI
Sbjct: 67 QEQGSYVGEVVRVMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKI 126
Query: 189 LPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGV 248
LPNKVDPLVSLMMVEKVPDSTYEM+GGLD QIKEIKEVIELPVKHPELF+ALGIAQPKGV
Sbjct: 127 LPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGV 186
Query: 249 LLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFA 308
LLYGPPGTGKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMA
Sbjct: 187 LLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMA-------- 238
Query: 309 HHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELL 368
REHAPSIIFMDEIDSIGSSR+E GSGGDSEVQRTMLELL
Sbjct: 239 ---------------------REHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELL 277
Query: 369 NQLDGFEATK 378
NQLDGFEATK
Sbjct: 278 NQLDGFEATK 287
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/68 (72%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMAR S MD
Sbjct: 194 TGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPS----IIFMD 249
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 250 EIDSIGSS 257
>gi|348508744|ref|XP_003441913.1| PREDICTED: 26S protease regulatory subunit 8-like [Oreochromis
niloticus]
Length = 407
Score = 474 bits (1221), Expect = e-131, Method: Compositional matrix adjust.
Identities = 250/302 (82%), Positives = 262/302 (86%), Gaps = 29/302 (9%)
Query: 77 KSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVG 136
K G + YY++KIEELQL V EK QNLRRLQAQRNELNAKVR+LREELQLLQEQGSYVG
Sbjct: 16 KGGSGLRQYYLSKIEELQLTVNEKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVG 75
Query: 137 EVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPL 196
EVV+ MDKKKVLVKVHPEGKFVVD+DKNIDINDVTPNCRVALRN+SYTLHKILPNKVDPL
Sbjct: 76 EVVRVMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPL 135
Query: 197 VSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGT 256
VSLMMVEKVPDSTYEM+GGLD QIKEIKEVIELPVKHPELF+ALGIAQPKGVLLYGPPGT
Sbjct: 136 VSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGT 195
Query: 257 GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWS 316
GKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMA
Sbjct: 196 GKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMA---------------- 239
Query: 317 LLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
REHAPSIIFMDEIDSIGSSR+E GSGGDSEVQRTMLELLNQLDGFEA
Sbjct: 240 -------------REHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEA 286
Query: 377 TK 378
TK
Sbjct: 287 TK 288
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/68 (72%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMAR S MD
Sbjct: 195 TGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPS----IIFMD 250
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 251 EIDSIGSS 258
>gi|432922337|ref|XP_004080302.1| PREDICTED: 26S protease regulatory subunit 8-like [Oryzias latipes]
Length = 406
Score = 474 bits (1221), Expect = e-131, Method: Compositional matrix adjust.
Identities = 250/302 (82%), Positives = 262/302 (86%), Gaps = 29/302 (9%)
Query: 77 KSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVG 136
K G + YY++KIEELQL V EK QNLRRLQAQRNELNAKVR+LREELQLLQEQGSYVG
Sbjct: 15 KGGSGLRQYYLSKIEELQLTVNEKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVG 74
Query: 137 EVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPL 196
EVV+ MDKKKVLVKVHPEGKFVVD+DKNIDINDVTPNCRVALRN+SYTLHKILPNKVDPL
Sbjct: 75 EVVRVMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPL 134
Query: 197 VSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGT 256
VSLMMVEKVPDSTYEM+GGLD QIKEIKEVIELPVKHPELF+ALGIAQPKGVLLYGPPGT
Sbjct: 135 VSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGT 194
Query: 257 GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWS 316
GKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMA
Sbjct: 195 GKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMA---------------- 238
Query: 317 LLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
REHAPSIIFMDEIDSIGSSR+E GSGGDSEVQRTMLELLNQLDGFEA
Sbjct: 239 -------------REHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEA 285
Query: 377 TK 378
TK
Sbjct: 286 TK 287
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/68 (72%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMAR S MD
Sbjct: 194 TGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPS----IIFMD 249
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 250 EIDSIGSS 257
>gi|21410100|gb|AAH30840.1| Psmc5 protein [Mus musculus]
gi|148702337|gb|EDL34284.1| protease (prosome, macropain) 26S subunit, ATPase 5, isoform CRA_c
[Mus musculus]
Length = 348
Score = 474 bits (1221), Expect = e-131, Method: Compositional matrix adjust.
Identities = 252/309 (81%), Positives = 269/309 (87%), Gaps = 30/309 (9%)
Query: 70 MDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQ 129
M+++E K+ G + YY++KIEELQLIV +K QNLRRLQAQRNELNAKVR+LREELQLLQ
Sbjct: 9 MELEEG-KAGSGLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQ 67
Query: 130 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKIL 189
EQGSYVGEVV+ MDKKKVLVKVHPEGKFVVD+DKNIDINDVTPNCRVALRN+SYTLHKIL
Sbjct: 68 EQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKIL 127
Query: 190 PNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVL 249
PNKVDPLVSLMMVEKVPDSTYEM+GGLD QIKEIKEVIELPVKHPELF+ALGIAQPKGVL
Sbjct: 128 PNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVL 187
Query: 250 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAH 309
LYGPPGTGKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMA
Sbjct: 188 LYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMA--------- 238
Query: 310 HPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN 369
REHAPSIIFMDEIDSIGSSR+E GSGGDSEVQRTMLELLN
Sbjct: 239 --------------------REHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLN 278
Query: 370 QLDGFEATK 378
QLDGFEATK
Sbjct: 279 QLDGFEATK 287
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 49/68 (72%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMAR S MD
Sbjct: 194 TGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPS----IIFMD 249
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 250 EIDSIGSS 257
>gi|225707968|gb|ACO09830.1| 26S protease regulatory subunit 8 [Osmerus mordax]
Length = 406
Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust.
Identities = 250/305 (81%), Positives = 263/305 (86%), Gaps = 29/305 (9%)
Query: 74 EAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGS 133
E K G + YY++KIEELQL V +K QNLRRLQAQRNELNAKVR+LREELQLLQEQGS
Sbjct: 12 EDNKGGSGLRQYYLSKIEELQLTVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGS 71
Query: 134 YVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKV 193
YVGEVV+ MDKKKVLVKVHPEGKFVVD+DKNIDINDVTPNCRVALRN+SYTLHKILPNKV
Sbjct: 72 YVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKV 131
Query: 194 DPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGP 253
DPLVSLMMVEKVPDSTYEM+GGLD QIKEIKEVIELPVKHPELF+ALGIAQPKGVLLYGP
Sbjct: 132 DPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGP 191
Query: 254 PGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLL 313
PGTGKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMA
Sbjct: 192 PGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMA------------- 238
Query: 314 FWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDG 373
REHAPSIIFMDEIDSIGSSR+E GSGGDSEVQRTMLELLNQLDG
Sbjct: 239 ----------------REHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDG 282
Query: 374 FEATK 378
FEATK
Sbjct: 283 FEATK 287
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/68 (72%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMAR S MD
Sbjct: 194 TGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPS----IIFMD 249
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 250 EIDSIGSS 257
>gi|148236805|ref|NP_001085482.1| proteasome (prosome, macropain) 26S subunit, ATPase, 5 [Xenopus
laevis]
gi|49255977|gb|AAH72829.1| MGC80185 protein [Xenopus laevis]
gi|116284353|gb|AAH45221.1| MGC80185 protein [Xenopus laevis]
Length = 415
Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust.
Identities = 250/309 (80%), Positives = 268/309 (86%), Gaps = 30/309 (9%)
Query: 70 MDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQ 129
M++DE+ + G + YY +KIE+LQL+V +K QNLRRLQAQRNELNAKVR+LREELQLLQ
Sbjct: 18 MEMDES-RGGIGLRQYYSSKIEDLQLVVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQ 76
Query: 130 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKIL 189
EQGSYVGEVV+ MDKKKVLVKVHPEGKFVVD+DKNIDINDVTPNCRVALRN+SYTLHKIL
Sbjct: 77 EQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKIL 136
Query: 190 PNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVL 249
PNKVDPLVSLMMVEKVPDSTYEM+GGLD QIKEIKEVIELPVKHPELF+ALGIAQPKGVL
Sbjct: 137 PNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVL 196
Query: 250 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAH 309
LYGPPGTGKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMA
Sbjct: 197 LYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMA--------- 247
Query: 310 HPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN 369
REHAPSIIFMDEIDSIGSSR+E GSGGDSEVQRTMLELLN
Sbjct: 248 --------------------REHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLN 287
Query: 370 QLDGFEATK 378
QLDGFEATK
Sbjct: 288 QLDGFEATK 296
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/68 (72%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMAR S MD
Sbjct: 203 TGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPS----IIFMD 258
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 259 EIDSIGSS 266
>gi|355754286|gb|EHH58251.1| hypothetical protein EGM_08055 [Macaca fascicularis]
Length = 406
Score = 474 bits (1219), Expect = e-131, Method: Compositional matrix adjust.
Identities = 251/309 (81%), Positives = 268/309 (86%), Gaps = 30/309 (9%)
Query: 70 MDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQ 129
M+++E K+ G + YY++KIEELQLIV +K QNLRRLQAQRNELNAKVR+LREELQLLQ
Sbjct: 9 MELEEG-KAGSGLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQ 67
Query: 130 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKIL 189
EQ SYVGEVV+ MDKKKVLVKVHPEGKFVVD+DKNIDINDVTPNCRVALRN+SYTLHKIL
Sbjct: 68 EQDSYVGEVVQAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKIL 127
Query: 190 PNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVL 249
PNKVDPLVSLMMVEKVPDSTYEM+GGLD QIKEIKEVIELPVKHPELF+ALGIAQPKGVL
Sbjct: 128 PNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVL 187
Query: 250 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAH 309
LYGPPGTGKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMA
Sbjct: 188 LYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMA--------- 238
Query: 310 HPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN 369
REHAPSIIFMDEIDSIGSSR+E GSGGDSEVQRTMLELLN
Sbjct: 239 --------------------REHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLN 278
Query: 370 QLDGFEATK 378
QLDGFEATK
Sbjct: 279 QLDGFEATK 287
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/68 (72%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMAR S MD
Sbjct: 194 TGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPS----IIFMD 249
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 250 EIDSIGSS 257
>gi|312071353|ref|XP_003138569.1| 26S protease regulatory subunit 8 [Loa loa]
gi|307766267|gb|EFO25501.1| 26S protease regulatory subunit 8 [Loa loa]
Length = 409
Score = 474 bits (1219), Expect = e-131, Method: Compositional matrix adjust.
Identities = 239/304 (78%), Positives = 251/304 (82%), Gaps = 31/304 (10%)
Query: 77 KSSE--GFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSY 134
KSSE K YY TKIE++Q VAEK QNLRRL AQRNELN KVRML+EELQ L EQGSY
Sbjct: 16 KSSEEQSLKRYYKTKIEDMQQRVAEKTQNLRRLHAQRNELNTKVRMLKEELQQLHEQGSY 75
Query: 135 VGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVD 194
VGEV K MDKKKVLVKVHPEGK+VVD+DK IDIN +T CRVALR +SY LHK+LPNK+D
Sbjct: 76 VGEVSKAMDKKKVLVKVHPEGKYVVDLDKGIDINSITSGCRVALRADSYALHKVLPNKID 135
Query: 195 PLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPP 254
PLVSLMMVEKVPDSTYEM+GGLD QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPP
Sbjct: 136 PLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPP 195
Query: 255 GTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLF 314
GTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEG+RMVRELFVMA
Sbjct: 196 GTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMA-------------- 241
Query: 315 WSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGF 374
REHAPSIIFMDEIDSIGSSR+E SGGDSEVQRTMLELLNQLDGF
Sbjct: 242 ---------------REHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGF 286
Query: 375 EATK 378
EATK
Sbjct: 287 EATK 290
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/68 (73%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHTECTFIRVSGSELVQKFIGEG+RMVRELFVMAR S MD
Sbjct: 197 TGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPS----IIFMD 252
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 253 EIDSIGSS 260
>gi|229366526|gb|ACQ58243.1| 26S protease regulatory subunit 8 [Anoplopoma fimbria]
Length = 406
Score = 473 bits (1217), Expect = e-131, Method: Compositional matrix adjust.
Identities = 249/302 (82%), Positives = 262/302 (86%), Gaps = 29/302 (9%)
Query: 77 KSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVG 136
K G + YY++KIEELQL V +K QNLRRLQAQRNELNAKVR+LREELQLLQEQGSYVG
Sbjct: 15 KGGSGLRQYYLSKIEELQLTVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVG 74
Query: 137 EVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPL 196
EVV+ MDKKKVLVKVHPEGKFVVD+DKNIDINDVTPNCRVALRN+SYTLHKILPNKVDPL
Sbjct: 75 EVVRVMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPL 134
Query: 197 VSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGT 256
VSLMMVEKVPDSTYEM+GGLD QIKEIKEVIELPVKHPELF+ALGIAQPKGVLLYGPPGT
Sbjct: 135 VSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGT 194
Query: 257 GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWS 316
GKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMA
Sbjct: 195 GKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMA---------------- 238
Query: 317 LLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
REHAPSIIFMDEIDSIGSSR+E GSGGDSEVQRTMLELLNQLDGFEA
Sbjct: 239 -------------REHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEA 285
Query: 377 TK 378
TK
Sbjct: 286 TK 287
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/68 (72%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMAR S MD
Sbjct: 194 TGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPS----IIFMD 249
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 250 EIDSIGSS 257
>gi|317419381|emb|CBN81418.1| 26S protease regulatory subunit 8 [Dicentrarchus labrax]
Length = 398
Score = 473 bits (1216), Expect = e-131, Method: Compositional matrix adjust.
Identities = 249/302 (82%), Positives = 262/302 (86%), Gaps = 29/302 (9%)
Query: 77 KSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVG 136
K G + YY++KIEELQL V +K QNLRRLQAQRNELNAKVR+LREELQLLQEQGSYVG
Sbjct: 7 KGGSGLRQYYLSKIEELQLTVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVG 66
Query: 137 EVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPL 196
EVV+ MDKKKVLVKVHPEGKFVVD+DKNIDINDVTPNCRVALRN+SYTLHKILPNKVDPL
Sbjct: 67 EVVRVMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPL 126
Query: 197 VSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGT 256
VSLMMVEKVPDSTYEM+GGLD QIKEIKEVIELPVKHPELF+ALGIAQPKGVLLYGPPGT
Sbjct: 127 VSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGT 186
Query: 257 GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWS 316
GKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMA
Sbjct: 187 GKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMA---------------- 230
Query: 317 LLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
REHAPSIIFMDEIDSIGSSR+E GSGGDSEVQRTMLELLNQLDGFEA
Sbjct: 231 -------------REHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEA 277
Query: 377 TK 378
TK
Sbjct: 278 TK 279
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/68 (72%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMAR S MD
Sbjct: 186 TGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPS----IIFMD 241
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 242 EIDSIGSS 249
>gi|695370|gb|AAC41735.1| thyroid receptor interactor [Homo sapiens]
gi|1094810|prf||2106382A thyroid hormone receptor-interacting protein
Length = 406
Score = 473 bits (1216), Expect = e-131, Method: Compositional matrix adjust.
Identities = 250/309 (80%), Positives = 267/309 (86%), Gaps = 30/309 (9%)
Query: 70 MDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQ 129
M+++E K+ G + YY++KIEELQLIV +K QNLRRLQAQRNELNAKVR+LREELQLLQ
Sbjct: 9 MELEEG-KAGSGLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQ 67
Query: 130 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKIL 189
EQGSYVGEVV+ MDKKKVLVKVHPEGKFVVD+DKNIDINDVTPNCRVALRN+SYTLHKIL
Sbjct: 68 EQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKIL 127
Query: 190 PNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVL 249
PNKVDPLVSLMMVEKVPDSTYEM+GGLD QIKEIKEVIELPVKHPELF+ALGIAQPKGVL
Sbjct: 128 PNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVL 187
Query: 250 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAH 309
LYGPPGTGKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMA
Sbjct: 188 LYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMA--------- 238
Query: 310 HPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN 369
REHAPSIIFMDEIDSIGSSR+E GSGG SEVQR MLELLN
Sbjct: 239 --------------------REHAPSIIFMDEIDSIGSSRLEGGSGGSSEVQRQMLELLN 278
Query: 370 QLDGFEATK 378
QLDGFEATK
Sbjct: 279 QLDGFEATK 287
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/68 (72%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMAR S MD
Sbjct: 194 TGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPS----IIFMD 249
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 250 EIDSIGSS 257
>gi|149054555|gb|EDM06372.1| peptidase (prosome, macropain) 26S subunit, ATPase 5, isoform CRA_a
[Rattus norvegicus]
Length = 385
Score = 473 bits (1216), Expect = e-131, Method: Compositional matrix adjust.
Identities = 252/309 (81%), Positives = 269/309 (87%), Gaps = 30/309 (9%)
Query: 70 MDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQ 129
M+++E K+ G + YY++KIEELQLIV +K QNLRRLQAQRNELNAKVR+LREELQLLQ
Sbjct: 19 MELEEG-KAGSGLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQ 77
Query: 130 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKIL 189
EQGSYVGEVV+ MDKKKVLVKVHPEGKFVVD+DKNIDINDVTPNCRVALRN+SYTLHKIL
Sbjct: 78 EQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKIL 137
Query: 190 PNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVL 249
PNKVDPLVSLMMVEKVPDSTYEM+GGLD QIKEIKEVIELPVKHPELF+ALGIAQPKGVL
Sbjct: 138 PNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVL 197
Query: 250 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAH 309
LYGPPGTGKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMA
Sbjct: 198 LYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMA--------- 248
Query: 310 HPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN 369
REHAPSIIFMDEIDSIGSSR+E GSGGDSEVQRTMLELLN
Sbjct: 249 --------------------REHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLN 288
Query: 370 QLDGFEATK 378
QLDGFEATK
Sbjct: 289 QLDGFEATK 297
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 49/68 (72%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMAR S MD
Sbjct: 204 TGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPS----IIFMD 259
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 260 EIDSIGSS 267
>gi|256048950|ref|XP_002569488.1| 26S protease regulatory subunit [Schistosoma mansoni]
gi|353231858|emb|CCD79213.1| putative 26s protease regulatory subunit [Schistosoma mansoni]
Length = 431
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 241/333 (72%), Positives = 268/333 (80%), Gaps = 43/333 (12%)
Query: 43 GEGSRMVRELFVMARCKGSSRGTEFFTMDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQ 102
GE SR V+ + + +GT +D ++G K YY+ KI+E Q I EK
Sbjct: 19 GEPSRKVK--------REAEKGT------LDPTPPPTDGIKNYYMNKIDEHQFIYTEKVL 64
Query: 103 NLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDID 162
NLRRL+AQRNELNAKVRMLREELQLLQEQGS+VGEV+K MDKKKVLVKV PEGK+VVDID
Sbjct: 65 NLRRLEAQRNELNAKVRMLREELQLLQEQGSFVGEVIKAMDKKKVLVKVQPEGKYVVDID 124
Query: 163 KNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKE 222
KNI+++ ++PNCRVALR++SYTLHKILP+KVDPLVSLMMVEKVPDSTYEM+GGLD QIKE
Sbjct: 125 KNIEMSQISPNCRVALRSDSYTLHKILPSKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKE 184
Query: 223 IKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELV 282
IKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELV
Sbjct: 185 IKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELV 244
Query: 283 QKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEI 342
QKFIGEG+RMVRELFVMA REHAPSIIFMDE+
Sbjct: 245 QKFIGEGARMVRELFVMA-----------------------------REHAPSIIFMDEV 275
Query: 343 DSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
DSIGS+R+ESG+GGDSEVQRTMLELLNQLDGFE
Sbjct: 276 DSIGSTRLESGTGGDSEVQRTMLELLNQLDGFE 308
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/46 (95%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHTECTFIRVSGSELVQKFIGEG+RMVRELFVMAR
Sbjct: 218 TGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMAR 263
>gi|195390811|ref|XP_002054061.1| GJ23001 [Drosophila virilis]
gi|194152147|gb|EDW67581.1| GJ23001 [Drosophila virilis]
Length = 408
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 235/302 (77%), Positives = 256/302 (84%), Gaps = 29/302 (9%)
Query: 77 KSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVG 136
K +G ++ KI ELQ IV+EK++NL+RL+AQRNELN+KVRMLREELQLLQEQGSYVG
Sbjct: 17 KQGDGLSSFFEQKIAELQFIVSEKQRNLQRLEAQRNELNSKVRMLREELQLLQEQGSYVG 76
Query: 137 EVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPL 196
EVVKP+DKKKVLVKVH +GK+VVD++KNIDINDVT N RVALR++SYTLHKILPNKVDPL
Sbjct: 77 EVVKPIDKKKVLVKVHHDGKYVVDVEKNIDINDVTTNSRVALRHDSYTLHKILPNKVDPL 136
Query: 197 VSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGT 256
VSLMMVEKVPDSTYEMVGGL QI EIKEVIELP+KHPELFDALGIAQPKGVLLYGPPGT
Sbjct: 137 VSLMMVEKVPDSTYEMVGGLSKQITEIKEVIELPIKHPELFDALGIAQPKGVLLYGPPGT 196
Query: 257 GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWS 316
GKTLLARAVAHHTECTFIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 197 GKTLLARAVAHHTECTFIRVSGSELVQKYIGEGSRMVRELFVMA---------------- 240
Query: 317 LLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
REHAPSIIFMDEIDSIGS+R+ESG G DSEVQRTMLELLNQLDGFEA
Sbjct: 241 -------------REHAPSIIFMDEIDSIGSARLESGRGADSEVQRTMLELLNQLDGFEA 287
Query: 377 TK 378
+K
Sbjct: 288 SK 289
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/46 (95%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHTECTFIRVSGSELVQK+IGEGSRMVRELFVMAR
Sbjct: 196 TGKTLLARAVAHHTECTFIRVSGSELVQKYIGEGSRMVRELFVMAR 241
>gi|226467157|emb|CAX76059.1| Tat-binding protein 10 [Schistosoma japonicum]
gi|226467161|emb|CAX76061.1| Tat-binding protein 10 [Schistosoma japonicum]
gi|226467163|emb|CAX76062.1| Tat-binding protein 10 [Schistosoma japonicum]
Length = 430
Score = 470 bits (1209), Expect = e-130, Method: Compositional matrix adjust.
Identities = 232/297 (78%), Positives = 254/297 (85%), Gaps = 29/297 (9%)
Query: 79 SEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEV 138
++G K YY+ KI+E Q I EK NLRRL+AQRNELNAKVRMLREELQLLQEQGS+VGEV
Sbjct: 41 TDGIKNYYMNKIDEHQFIYTEKVLNLRRLEAQRNELNAKVRMLREELQLLQEQGSFVGEV 100
Query: 139 VKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVS 198
+K MDKKKVLVKV PEGK+VVDIDKNI+++ ++PNCRVALR++SY LHKILP+KVDPLVS
Sbjct: 101 IKAMDKKKVLVKVQPEGKYVVDIDKNIEMSQISPNCRVALRSDSYILHKILPSKVDPLVS 160
Query: 199 LMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGK 258
LMMVEKVPDSTYEM+GGLD QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGK
Sbjct: 161 LMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGK 220
Query: 259 TLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLL 318
TLLARAVAHHTECTFIRVSGSELVQKFIGEG+RMVRELFVMA
Sbjct: 221 TLLARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMA------------------ 262
Query: 319 TILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
REHAPSIIFMDE+DSIGS+R+ESG+GGDSEVQRTMLELLNQLDGFE
Sbjct: 263 -----------REHAPSIIFMDEVDSIGSTRLESGTGGDSEVQRTMLELLNQLDGFE 308
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/46 (95%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHTECTFIRVSGSELVQKFIGEG+RMVRELFVMAR
Sbjct: 218 TGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMAR 263
>gi|55729400|emb|CAH91432.1| hypothetical protein [Pongo abelii]
Length = 398
Score = 470 bits (1209), Expect = e-130, Method: Compositional matrix adjust.
Identities = 249/309 (80%), Positives = 266/309 (86%), Gaps = 30/309 (9%)
Query: 70 MDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQ 129
M+++E K+ G + YY++KIEELQLIV +K QNLRRLQAQRNELNAKVR+LREELQLLQ
Sbjct: 1 MELEEG-KAGSGLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQ 59
Query: 130 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKIL 189
EQGSYVGEVV+ MDKKKVLVKVHPEGKFVVD+DKNIDINDVTPNCRVALRN+SYTLHK L
Sbjct: 60 EQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKTL 119
Query: 190 PNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVL 249
PNKVDPLVSLMMVEKVPDSTYEM+GGLD QIKEIKEVIELPVKHPELF+ALGIAQPKGVL
Sbjct: 120 PNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVL 179
Query: 250 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAH 309
LYGPPGTGKTLLARAVAHHT+CTFIRVSGSELVQK IGEG+RMVRELFVMA
Sbjct: 180 LYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKLIGEGARMVRELFVMA--------- 230
Query: 310 HPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN 369
REHAPSIIFMDEIDSIGSSR+E GSG DSEVQRTMLELLN
Sbjct: 231 --------------------REHAPSIIFMDEIDSIGSSRLEGGSGRDSEVQRTMLELLN 270
Query: 370 QLDGFEATK 378
QLDGFEATK
Sbjct: 271 QLDGFEATK 279
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 53/68 (77%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+CTFIRVSGSELVQK IGEG+RMVRELFVMAR S MD
Sbjct: 186 TGKTLLARAVAHHTDCTFIRVSGSELVQKLIGEGARMVRELFVMAREHAPS----IIFMD 241
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 242 EIDSIGSS 249
>gi|327532765|ref|NP_001127417.1| 26S protease regulatory subunit 8 [Pongo abelii]
Length = 398
Score = 470 bits (1209), Expect = e-130, Method: Compositional matrix adjust.
Identities = 249/309 (80%), Positives = 266/309 (86%), Gaps = 30/309 (9%)
Query: 70 MDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQ 129
M+++E K+ G + YY++KIEELQLIV +K QNLRRLQAQRNELNAKVR+LREELQLLQ
Sbjct: 1 MELEEG-KAGSGLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQ 59
Query: 130 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKIL 189
EQGSYVGEVV+ MDKKKVLVKVHPEGKFVVD+DKNIDINDVTPNCRVALRN+SYTLHK L
Sbjct: 60 EQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKTL 119
Query: 190 PNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVL 249
PNKVDPLVSLMMVEKVPDSTYEM+GGLD QIKEIKEVIELPVKHPELF+ALGIAQPKGVL
Sbjct: 120 PNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVL 179
Query: 250 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAH 309
LYGPPGTGKTLLARAVAHHT+CTFIRVSGSELVQK IGEG+RMVRELFVMA
Sbjct: 180 LYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKLIGEGARMVRELFVMA--------- 230
Query: 310 HPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN 369
REHAPSIIFMDEIDSIGSSR+E GSG DSEVQRTMLELLN
Sbjct: 231 --------------------REHAPSIIFMDEIDSIGSSRLEGGSGRDSEVQRTMLELLN 270
Query: 370 QLDGFEATK 378
QLDGFEATK
Sbjct: 271 QLDGFEATK 279
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 53/68 (77%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+CTFIRVSGSELVQK IGEG+RMVRELFVMAR S MD
Sbjct: 186 TGKTLLARAVAHHTDCTFIRVSGSELVQKLIGEGARMVRELFVMAREHAPS----IIFMD 241
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 242 EIDSIGSS 249
>gi|226467155|emb|CAX76058.1| Tat-binding protein 10 [Schistosoma japonicum]
Length = 398
Score = 470 bits (1209), Expect = e-130, Method: Compositional matrix adjust.
Identities = 232/297 (78%), Positives = 254/297 (85%), Gaps = 29/297 (9%)
Query: 79 SEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEV 138
++G K YY+ KI+E Q I EK NLRRL+AQRNELNAKVRMLREELQLLQEQGS+VGEV
Sbjct: 9 TDGIKNYYMNKIDEHQFIYTEKVLNLRRLEAQRNELNAKVRMLREELQLLQEQGSFVGEV 68
Query: 139 VKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVS 198
+K MDKKKVLVKV PEGK+VVDIDKNI+++ ++PNCRVALR++SY LHKILP+KVDPLVS
Sbjct: 69 IKAMDKKKVLVKVQPEGKYVVDIDKNIEMSQISPNCRVALRSDSYILHKILPSKVDPLVS 128
Query: 199 LMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGK 258
LMMVEKVPDSTYEM+GGLD QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGK
Sbjct: 129 LMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGK 188
Query: 259 TLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLL 318
TLLARAVAHHTECTFIRVSGSELVQKFIGEG+RMVRELFVMA
Sbjct: 189 TLLARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMA------------------ 230
Query: 319 TILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
REHAPSIIFMDE+DSIGS+R+ESG+GGDSEVQRTMLELLNQLDGFE
Sbjct: 231 -----------REHAPSIIFMDEVDSIGSTRLESGTGGDSEVQRTMLELLNQLDGFE 276
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/46 (95%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHTECTFIRVSGSELVQKFIGEG+RMVRELFVMAR
Sbjct: 186 TGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMAR 231
>gi|241645478|ref|XP_002411084.1| 26S proteasome regulatory complex, ATPase RPT6, putative [Ixodes
scapularis]
gi|215503714|gb|EEC13208.1| 26S proteasome regulatory complex, ATPase RPT6, putative [Ixodes
scapularis]
Length = 348
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 241/311 (77%), Positives = 262/311 (84%), Gaps = 31/311 (9%)
Query: 68 FTMDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQL 127
F M+VD++ K +G K YY+TKIEELQL+V++K QNLRRLQAQRNELNAKVRMLREELQL
Sbjct: 7 FQMEVDDSPKG-DGLKQYYITKIEELQLVVSDKTQNLRRLQAQRNELNAKVRMLREELQL 65
Query: 128 LQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHK 187
LQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDI +VTPN RVALRN+SYTLHK
Sbjct: 66 LQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDIANVTPNSRVALRNDSYTLHK 125
Query: 188 ILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKG 247
ILPNK SL+++ ++ ++MVGGLD QIKEIKEVIELPVKHPELF+ALGIAQPKG
Sbjct: 126 ILPNKECSPYSLILLLQM-KRAFKMVGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKG 184
Query: 248 VLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAF 307
VLLYGPPGTGKTLLARAVAHHT+CTFIRVSGSELVQKFIGEGSRMVRELFVMA
Sbjct: 185 VLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGSRMVRELFVMA------- 237
Query: 308 AHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLEL 367
REHAPSIIFMDEIDSIGSSRI++GSGGDSEVQRTMLEL
Sbjct: 238 ----------------------REHAPSIIFMDEIDSIGSSRIDAGSGGDSEVQRTMLEL 275
Query: 368 LNQLDGFEATK 378
LNQLDGFEATK
Sbjct: 276 LNQLDGFEATK 286
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/68 (73%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+CTFIRVSGSELVQKFIGEGSRMVRELFVMAR S MD
Sbjct: 193 TGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPS----IIFMD 248
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 249 EIDSIGSS 256
>gi|56758410|gb|AAW27345.1| SJCHGC09272 protein [Schistosoma japonicum]
Length = 430
Score = 466 bits (1200), Expect = e-129, Method: Compositional matrix adjust.
Identities = 230/297 (77%), Positives = 252/297 (84%), Gaps = 29/297 (9%)
Query: 79 SEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEV 138
++G K YY+ KI+E Q I EK NLRRL+AQRNELNAKVRMLREELQLLQEQGS+VGEV
Sbjct: 41 ADGIKNYYMNKIDEHQFIYTEKVLNLRRLEAQRNELNAKVRMLREELQLLQEQGSFVGEV 100
Query: 139 VKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVS 198
+K MDKKKVLVKV PEGK+VVDIDKNI+++ ++PNCRVALR++SY LHKILP+KVDPLVS
Sbjct: 101 IKAMDKKKVLVKVQPEGKYVVDIDKNIEMSQISPNCRVALRSDSYILHKILPSKVDPLVS 160
Query: 199 LMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGK 258
LMMVEKVPDSTYEM+GGLD QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGK
Sbjct: 161 LMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGK 220
Query: 259 TLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLL 318
TLLARAVAHHTECTFIRVSGS VQKFIGEG+RMVRELFVMA
Sbjct: 221 TLLARAVAHHTECTFIRVSGSRAVQKFIGEGARMVRELFVMA------------------ 262
Query: 319 TILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
REHAPSIIFMDE+DSIGS+R+ESG+GGDSEVQRTMLELLNQLDGFE
Sbjct: 263 -----------REHAPSIIFMDEVDSIGSTRLESGTGGDSEVQRTMLELLNQLDGFE 308
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/46 (91%), Positives = 44/46 (95%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHTECTFIRVSGS VQKFIGEG+RMVRELFVMAR
Sbjct: 218 TGKTLLARAVAHHTECTFIRVSGSRAVQKFIGEGARMVRELFVMAR 263
>gi|324517522|gb|ADY46845.1| 26S protease regulatory subunit 8, partial [Ascaris suum]
Length = 407
Score = 466 bits (1199), Expect = e-129, Method: Compositional matrix adjust.
Identities = 234/297 (78%), Positives = 246/297 (82%), Gaps = 29/297 (9%)
Query: 82 FKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKP 141
K YY TKIE+ Q V EK QNLRRLQAQRNELN+KVRML+EELQ L EQGSYVGEV K
Sbjct: 21 LKRYYKTKIEDAQQRVTEKTQNLRRLQAQRNELNSKVRMLKEELQQLHEQGSYVGEVSKA 80
Query: 142 MDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMM 201
MDKKKVLVKVHPEGK+VVD+DK ID++ V CRVALR +SY LHKILPNKVDPLVSLMM
Sbjct: 81 MDKKKVLVKVHPEGKYVVDVDKGIDVSAVNAGCRVALRADSYALHKILPNKVDPLVSLMM 140
Query: 202 VEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLL 261
VEKVPDSTYEM+GGLD QIKEIKEVIELPVKHPELF+ALGIAQPKGVLLYGPPGTGKTLL
Sbjct: 141 VEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLL 200
Query: 262 ARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTIL 321
ARAVAHHTECTFIRVSGSELVQKFIGEG+RMVRELFVMA
Sbjct: 201 ARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMA--------------------- 239
Query: 322 TNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGSSR+E SGGDSEVQRTMLELLNQLDGFEATK
Sbjct: 240 --------REHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFEATK 288
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/68 (73%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHTECTFIRVSGSELVQKFIGEG+RMVRELFVMAR S MD
Sbjct: 195 TGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPS----IIFMD 250
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 251 EIDSIGSS 258
>gi|195113257|ref|XP_002001184.1| GI10644 [Drosophila mojavensis]
gi|193917778|gb|EDW16645.1| GI10644 [Drosophila mojavensis]
Length = 404
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 233/302 (77%), Positives = 254/302 (84%), Gaps = 29/302 (9%)
Query: 77 KSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVG 136
K G ++ KI ELQ IV+EK++NL RL+AQRNELN+KVRMLREELQLLQEQGSYVG
Sbjct: 13 KEGTGLSSFFEQKIAELQFIVSEKQRNLLRLEAQRNELNSKVRMLREELQLLQEQGSYVG 72
Query: 137 EVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPL 196
EVVKP+DKKKVLVKVH +GK+VVD++KNIDINDVT N RVALR++SYTLHKILP+KVDPL
Sbjct: 73 EVVKPIDKKKVLVKVHHDGKYVVDVEKNIDINDVTTNSRVALRHDSYTLHKILPSKVDPL 132
Query: 197 VSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGT 256
VSLM+VEKVPDSTYEMVGGL QI EIKEVIELP+KHPELFDALGIAQPKGVLLYGPPGT
Sbjct: 133 VSLMLVEKVPDSTYEMVGGLSKQITEIKEVIELPIKHPELFDALGIAQPKGVLLYGPPGT 192
Query: 257 GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWS 316
GKTLLARAVAHHTECTFIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 193 GKTLLARAVAHHTECTFIRVSGSELVQKYIGEGSRMVRELFVMA---------------- 236
Query: 317 LLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
REHAPSIIFMDEIDSIGS+R+ESG G DSEVQRTMLELLNQLDGFEA
Sbjct: 237 -------------REHAPSIIFMDEIDSIGSARLESGRGADSEVQRTMLELLNQLDGFEA 283
Query: 377 TK 378
+K
Sbjct: 284 SK 285
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/46 (95%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHTECTFIRVSGSELVQK+IGEGSRMVRELFVMAR
Sbjct: 192 TGKTLLARAVAHHTECTFIRVSGSELVQKYIGEGSRMVRELFVMAR 237
>gi|268571361|ref|XP_002641019.1| C. briggsae CBR-RPT-6 protein [Caenorhabditis briggsae]
Length = 417
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 232/301 (77%), Positives = 247/301 (82%), Gaps = 29/301 (9%)
Query: 78 SSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGE 137
S E + Y+ TK+++ Q VA+K QN+RRLQAQRNELN KVRML+EELQ L EQGSYVGE
Sbjct: 27 SEETLRKYFRTKVDDAQQKVADKSQNVRRLQAQRNELNTKVRMLKEELQQLHEQGSYVGE 86
Query: 138 VVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLV 197
V K MDKKKVLVKVHPEGK+VVD+DK IDIN + RVALR +SY LHK+LPNKVDPLV
Sbjct: 87 VSKAMDKKKVLVKVHPEGKYVVDVDKTIDINSLNTGARVALRADSYALHKVLPNKVDPLV 146
Query: 198 SLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTG 257
SLMMVEKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTG
Sbjct: 147 SLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTG 206
Query: 258 KTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSL 317
KTLLARAVAHHTECTFIRVSGSELVQKFIGEG+RMVRELFVMA
Sbjct: 207 KTLLARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMA----------------- 249
Query: 318 LTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEAT 377
REHAPSIIFMDEIDSIGSSR+E SGGDSEVQRTMLELLNQLDGFEAT
Sbjct: 250 ------------REHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFEAT 297
Query: 378 K 378
K
Sbjct: 298 K 298
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/68 (73%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHTECTFIRVSGSELVQKFIGEG+RMVRELFVMAR S MD
Sbjct: 205 TGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPS----IIFMD 260
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 261 EIDSIGSS 268
>gi|148238082|ref|NP_001081635.1| 26S protease regulatory subunit 8 [Xenopus laevis]
gi|3041724|sp|P46470.2|PRS8_XENLA RecName: Full=26S protease regulatory subunit 8; AltName: Full=26S
proteasome AAA-ATPase subunit RPT6; AltName:
Full=Proteasome 26S subunit ATPase 5; AltName: Full=SUG1
homolog; Short=xSUG1
gi|1877414|emb|CAA57512.1| XSUG1 [Xenopus laevis]
Length = 461
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 248/309 (80%), Positives = 267/309 (86%), Gaps = 31/309 (10%)
Query: 70 MDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQ 129
M++DE+ + G + YY++KIE+LQL+V +K QNLRRLQAQRNELNAKVR+LREELQLLQ
Sbjct: 4 MEMDES-RGGTGLRQYYLSKIEDLQLVVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQ 62
Query: 130 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKIL 189
EQGSYVGEVV+ MDKKKVLVKVHPEGKFVVD+DKNIDINDVTPNCRVALRN+SYTLHKIL
Sbjct: 63 EQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKIL 122
Query: 190 PNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVL 249
PNKVDPLVSLMMVEKVPDSTYEM+GGLD QIKEIKEVIELPVKHPE F+ALGIAQPKGVL
Sbjct: 123 PNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPEHFEALGIAQPKGVL 182
Query: 250 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAH 309
LYGPPGTGKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMA
Sbjct: 183 LYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMA--------- 233
Query: 310 HPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN 369
REHAPSIIFMDEIDSIG SR+E GSGGDSEVQRTMLELLN
Sbjct: 234 --------------------REHAPSIIFMDEIDSIG-SRLEGGSGGDSEVQRTMLELLN 272
Query: 370 QLDGFEATK 378
QLDGFEATK
Sbjct: 273 QLDGFEATK 281
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/46 (93%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMAR
Sbjct: 189 TGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAR 234
>gi|328908743|gb|AEB61039.1| 26S protease regulatory subunit 8-like protein, partial [Equus
caballus]
Length = 345
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 247/309 (79%), Positives = 266/309 (86%), Gaps = 30/309 (9%)
Query: 70 MDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQ 129
M+++E K+ G + YY++KIE LQLIV ++ QNLRRLQAQRNELNAKVR+LREELQLLQ
Sbjct: 11 MELEEG-KAGSGLRQYYLSKIEGLQLIVNDRSQNLRRLQAQRNELNAKVRLLREELQLLQ 69
Query: 130 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKIL 189
EQGSYVGEVV+ MDKKKVLVKVHPEGKFVVD+DKNIDINDVTPNCRVALRN+SYTLHKIL
Sbjct: 70 EQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKIL 129
Query: 190 PNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVL 249
PNKVDPLVSL+MVEKVPDSTYEM+G LD QIKEIKEVIELPVKHPE F+ALGIAQPKGVL
Sbjct: 130 PNKVDPLVSLIMVEKVPDSTYEMIGELDKQIKEIKEVIELPVKHPEPFEALGIAQPKGVL 189
Query: 250 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAH 309
LYGPPGTGKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMA
Sbjct: 190 LYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMA--------- 240
Query: 310 HPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN 369
REHAPSIIFMDEIDSIGSSR+E GSGGDSEVQRTMLELLN
Sbjct: 241 --------------------REHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLN 280
Query: 370 QLDGFEATK 378
QLDGFEATK
Sbjct: 281 QLDGFEATK 289
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/68 (72%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMAR S MD
Sbjct: 196 TGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPS----IIFMD 251
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 252 EIDSIGSS 259
>gi|324515052|gb|ADY46074.1| 26S protease regulatory subunit 8, partial [Ascaris suum]
Length = 465
Score = 463 bits (1192), Expect = e-128, Method: Compositional matrix adjust.
Identities = 234/297 (78%), Positives = 246/297 (82%), Gaps = 29/297 (9%)
Query: 82 FKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKP 141
K YY TKIE+ Q V EK QNLRRLQAQRNELN+KVRML+EELQ L EQGSYVGEV K
Sbjct: 79 LKRYYKTKIEDAQQRVTEKTQNLRRLQAQRNELNSKVRMLKEELQQLHEQGSYVGEVSKA 138
Query: 142 MDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMM 201
MDKKKVLVKVHPEGK+VVD+DK ID++ V CRVALR +SY LHKILPNKVDPLVSLMM
Sbjct: 139 MDKKKVLVKVHPEGKYVVDVDKGIDVSAVNAGCRVALRADSYALHKILPNKVDPLVSLMM 198
Query: 202 VEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLL 261
VEKVPDSTYEM+GGLD QIKEIKEVIELPVKHPELF+ALGIAQPKGVLLYGPPGTGKTLL
Sbjct: 199 VEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLL 258
Query: 262 ARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTIL 321
ARAVAHHTECTFIRVSGSELVQKFIGEG+RMVRELFVMA
Sbjct: 259 ARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMA--------------------- 297
Query: 322 TNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGSSR+E SGGDSEVQRTMLELLNQLDGFEATK
Sbjct: 298 --------REHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFEATK 346
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/68 (73%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHTECTFIRVSGSELVQKFIGEG+RMVRELFVMAR S MD
Sbjct: 253 TGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPS----IIFMD 308
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 309 EIDSIGSS 316
>gi|344243069|gb|EGV99172.1| 26S protease regulatory subunit 8 [Cricetulus griseus]
Length = 423
Score = 463 bits (1191), Expect = e-128, Method: Compositional matrix adjust.
Identities = 252/334 (75%), Positives = 269/334 (80%), Gaps = 55/334 (16%)
Query: 70 MDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQ 129
M+++E K+ G + YY++KIEELQLIV +K QNLRRLQAQRNELNAKVR+LREELQLLQ
Sbjct: 1 MELEEG-KAGSGLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQ 59
Query: 130 EQGSYVGEVVKPMDKKKVLVK-------------------------VHPEGKFVVDIDKN 164
EQGSYVGEVV+ MDKKKVLVK VHPEGKFVVD+DKN
Sbjct: 60 EQGSYVGEVVRAMDKKKVLVKNFPVVFLVRGDVLTVEENHEPLFLQVHPEGKFVVDVDKN 119
Query: 165 IDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIK 224
IDINDVTPNCRVALRN+SYTLHKILPNKVDPLVSLMMVEKVPDSTYEM+GGLD QIKEIK
Sbjct: 120 IDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIK 179
Query: 225 EVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQK 284
EVIELPVKHPELF+ALGIAQPKGVLLYGPPGTGKTLLARAVAHHT+CTFIRVSGSELVQK
Sbjct: 180 EVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQK 239
Query: 285 FIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDS 344
FIGEG+RMVRELFVMA REHAPSIIFMDEIDS
Sbjct: 240 FIGEGARMVRELFVMA-----------------------------REHAPSIIFMDEIDS 270
Query: 345 IGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
IGSSR+E GSGGDSEVQRTMLELLNQLDGFEATK
Sbjct: 271 IGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATK 304
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/68 (72%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMAR S MD
Sbjct: 211 TGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPS----IIFMD 266
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 267 EIDSIGSS 274
>gi|308463093|ref|XP_003093824.1| CRE-RPT-6 protein [Caenorhabditis remanei]
gi|308249314|gb|EFO93266.1| CRE-RPT-6 protein [Caenorhabditis remanei]
Length = 408
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 231/301 (76%), Positives = 247/301 (82%), Gaps = 29/301 (9%)
Query: 78 SSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGE 137
+ E + Y+ TK++ Q VA+K QN+RRLQAQRNELN KVRML+EELQ L EQGSYVGE
Sbjct: 23 NEETLRKYFRTKVDAAQQKVADKSQNVRRLQAQRNELNTKVRMLKEELQQLHEQGSYVGE 82
Query: 138 VVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLV 197
V K MDKKKVLVKVHPEGK+VVD+DK+IDIN + RVALR +SY LHK+LPNKVDPLV
Sbjct: 83 VSKAMDKKKVLVKVHPEGKYVVDVDKSIDINSLNTGARVALRADSYALHKVLPNKVDPLV 142
Query: 198 SLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTG 257
SLMMVEKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTG
Sbjct: 143 SLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTG 202
Query: 258 KTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSL 317
KTLLARAVAHHTECTFIRVSGSELVQKFIGEG+RMVRELFVMA
Sbjct: 203 KTLLARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMA----------------- 245
Query: 318 LTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEAT 377
REHAPSIIFMDEIDSIGSSR+E SGGDSEVQRTMLELLNQLDGFEAT
Sbjct: 246 ------------REHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFEAT 293
Query: 378 K 378
K
Sbjct: 294 K 294
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/68 (73%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHTECTFIRVSGSELVQKFIGEG+RMVRELFVMAR S MD
Sbjct: 201 TGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPS----IIFMD 256
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 257 EIDSIGSS 264
>gi|17554786|ref|NP_499609.1| Protein RPT-6 [Caenorhabditis elegans]
gi|3979998|emb|CAB11558.1| Protein RPT-6 [Caenorhabditis elegans]
Length = 416
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 229/297 (77%), Positives = 246/297 (82%), Gaps = 29/297 (9%)
Query: 82 FKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKP 141
+ Y+ TK+++ Q VA+K QN+RRLQAQRNELN KVRML+EELQ L EQGSYVGEV K
Sbjct: 30 LRKYFSTKVDDAQQKVADKSQNVRRLQAQRNELNTKVRMLKEELQQLHEQGSYVGEVSKA 89
Query: 142 MDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMM 201
MDKKKVLVKVHPEGK+VVD+DK+IDIN + RVALR +SY LHK+LPNKVDPLVSLMM
Sbjct: 90 MDKKKVLVKVHPEGKYVVDVDKSIDINSLNTGARVALRADSYALHKLLPNKVDPLVSLMM 149
Query: 202 VEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLL 261
VEKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELFDALGIAQPKGVLL+GPPGTGKTLL
Sbjct: 150 VEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLFGPPGTGKTLL 209
Query: 262 ARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTIL 321
ARAVAHHTECTFIRVSGSELVQKFIGEG+RMVRELFVMA
Sbjct: 210 ARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMA--------------------- 248
Query: 322 TNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGSSR+E SGGDSEVQRTMLELLNQLDGFEATK
Sbjct: 249 --------REHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFEATK 297
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/68 (73%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHTECTFIRVSGSELVQKFIGEG+RMVRELFVMAR S MD
Sbjct: 204 TGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPS----IIFMD 259
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 260 EIDSIGSS 267
>gi|318060858|ref|NP_001188134.1| 26S protease regulatory subunit 8 [Ictalurus punctatus]
gi|308323111|gb|ADO28692.1| 26S protease regulatory subunit 8 [Ictalurus punctatus]
Length = 430
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 241/298 (80%), Positives = 258/298 (86%), Gaps = 29/298 (9%)
Query: 78 SSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGE 137
+++G + YY KI+ELQ +V EK QNLRRL+AQRNELNAKVR+LREELQLLQEQGSYVGE
Sbjct: 40 ANDGIRDYYCWKIDELQFVVTEKTQNLRRLEAQRNELNAKVRLLREELQLLQEQGSYVGE 99
Query: 138 VVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLV 197
V+KPMDKKKVLVKV PEGKFVVDIDKNIDI +TPNCRVALRN+SYTLHKILP+KVDPLV
Sbjct: 100 VIKPMDKKKVLVKVQPEGKFVVDIDKNIDIASITPNCRVALRNDSYTLHKILPSKVDPLV 159
Query: 198 SLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTG 257
SLMMVEKVPDSTYEM+GGLD QIKEIKEVIELPVKHPELF+ALGIAQPKGVLLYGPPGTG
Sbjct: 160 SLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTG 219
Query: 258 KTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSL 317
KTLLARAVAHHTECTFIRVSGSELVQKFIGEG+RMVRELFVMA
Sbjct: 220 KTLLARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMA----------------- 262
Query: 318 LTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
REHAPSIIFMDE+DSIGS+RIESGSGGDSEVQRTMLELLNQLDGFE
Sbjct: 263 ------------REHAPSIIFMDEVDSIGSARIESGSGGDSEVQRTMLELLNQLDGFE 308
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/46 (95%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHTECTFIRVSGSELVQKFIGEG+RMVRELFVMAR
Sbjct: 218 TGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMAR 263
>gi|77993700|gb|ABB13463.1| 26S proteasome subunit RPT6, partial [Schistosoma mansoni]
Length = 382
Score = 459 bits (1181), Expect = e-127, Method: Compositional matrix adjust.
Identities = 228/289 (78%), Positives = 248/289 (85%), Gaps = 29/289 (10%)
Query: 87 VTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKK 146
+ KI+E Q I EK NLRRL+AQRNELNAKVRMLREELQLLQEQGS+VGEV+K MDKKK
Sbjct: 1 MNKIDEHQFIYTEKVLNLRRLEAQRNELNAKVRMLREELQLLQEQGSFVGEVIKAMDKKK 60
Query: 147 VLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVP 206
VLVKV PEGK+VVDIDKNI+++ ++PNCRVALR++SYTLHKILP+KVDPLVSLMMVEKVP
Sbjct: 61 VLVKVQPEGKYVVDIDKNIEMSQISPNCRVALRSDSYTLHKILPSKVDPLVSLMMVEKVP 120
Query: 207 DSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVA 266
DSTYEM+GGLD QIKEIKEVIELPVKHPE FDALGIAQPKGVLLYGPPGTGKTLLARAVA
Sbjct: 121 DSTYEMIGGLDKQIKEIKEVIELPVKHPEPFDALGIAQPKGVLLYGPPGTGKTLLARAVA 180
Query: 267 HHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIV 326
HHTECTFIRVSGSELVQKFIGEG+RMVRELFVMA
Sbjct: 181 HHTECTFIRVSGSELVQKFIGEGARMVRELFVMA-------------------------- 214
Query: 327 CNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
REHAPSIIFMDE+DSIGS+R+ESG+GGDSEVQRTMLELLNQLDGFE
Sbjct: 215 ---REHAPSIIFMDEVDSIGSTRLESGTGGDSEVQRTMLELLNQLDGFE 260
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/46 (95%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHTECTFIRVSGSELVQKFIGEG+RMVRELFVMAR
Sbjct: 170 TGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMAR 215
>gi|341897606|gb|EGT53541.1| hypothetical protein CAEBREN_19051 [Caenorhabditis brenneri]
Length = 416
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 229/299 (76%), Positives = 246/299 (82%), Gaps = 29/299 (9%)
Query: 80 EGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVV 139
E + ++ TK+++ Q VA+K QN+RRLQAQRNELN KVRML+EELQ L EQGSYVGEV
Sbjct: 28 ETLRMFFRTKVDDAQQKVADKSQNVRRLQAQRNELNTKVRMLKEELQQLHEQGSYVGEVS 87
Query: 140 KPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSL 199
K MDKKKVLVKVHPEGK+VVD+DK+IDI + RVALR +SY LHK+LPNKVDPLVSL
Sbjct: 88 KAMDKKKVLVKVHPEGKYVVDVDKSIDIGSLNTGARVALRADSYALHKVLPNKVDPLVSL 147
Query: 200 MMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKT 259
MMVEKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKT
Sbjct: 148 MMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKT 207
Query: 260 LLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLT 319
LLARAVAHHTECTFIRVSGSELVQKFIGEG+RMVRELFVMA
Sbjct: 208 LLARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMA------------------- 248
Query: 320 ILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGSSR+E SGGDSEVQRTMLELLNQLDGFEATK
Sbjct: 249 ----------REHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFEATK 297
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/68 (73%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHTECTFIRVSGSELVQKFIGEG+RMVRELFVMAR S MD
Sbjct: 204 TGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPS----IIFMD 259
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 260 EIDSIGSS 267
>gi|341891335|gb|EGT47270.1| hypothetical protein CAEBREN_10399 [Caenorhabditis brenneri]
Length = 416
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 229/299 (76%), Positives = 246/299 (82%), Gaps = 29/299 (9%)
Query: 80 EGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVV 139
E + ++ TK+++ Q VA+K QN+RRLQAQRNELN KVRML+EELQ L EQGSYVGEV
Sbjct: 28 ETLRMFFRTKVDDAQQKVADKSQNVRRLQAQRNELNTKVRMLKEELQQLHEQGSYVGEVS 87
Query: 140 KPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSL 199
K MDKKKVLVKVHPEGK+VVD+DK+IDI + RVALR +SY LHK+LPNKVDPLVSL
Sbjct: 88 KAMDKKKVLVKVHPEGKYVVDVDKSIDIGSLNTGARVALRADSYALHKVLPNKVDPLVSL 147
Query: 200 MMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKT 259
MMVEKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKT
Sbjct: 148 MMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKT 207
Query: 260 LLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLT 319
LLARAVAHHTECTFIRVSGSELVQKFIGEG+RMVRELFVMA
Sbjct: 208 LLARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMA------------------- 248
Query: 320 ILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGSSR+E SGGDSEVQRTMLELLNQLDGFEATK
Sbjct: 249 ----------REHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFEATK 297
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/68 (73%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHTECTFIRVSGSELVQKFIGEG+RMVRELFVMAR S MD
Sbjct: 204 TGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPS----IIFMD 259
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 260 EIDSIGSS 267
>gi|198451681|ref|XP_002137338.1| GA26607 [Drosophila pseudoobscura pseudoobscura]
gi|198131597|gb|EDY67896.1| GA26607 [Drosophila pseudoobscura pseudoobscura]
Length = 405
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 244/316 (77%), Positives = 260/316 (82%), Gaps = 37/316 (11%)
Query: 70 MDVDEAIKSSEG-------FKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLR 122
MDVD A+ + G F+ Y++ KI ELQ VAEK NLRRLQAQRNELNA VRMLR
Sbjct: 1 MDVDIALVAVNGGAVKGLGFQSYFMQKISELQFTVAEKNANLRRLQAQRNELNANVRMLR 60
Query: 123 EELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNES 182
EELQLL EQGSYVGEV+KPMDK KVLVKVHPEGK+VVD+DK IDI D+ P+CRVALRNES
Sbjct: 61 EELQLLLEQGSYVGEVIKPMDKNKVLVKVHPEGKYVVDVDKGIDIKDLAPSCRVALRNES 120
Query: 183 YTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGI 242
YTLHKILP+KVDPLVSLM+VEKVPDSTYEMVGGLD QIKEIKEVIELP+KHPELFDALGI
Sbjct: 121 YTLHKILPSKVDPLVSLMLVEKVPDSTYEMVGGLDKQIKEIKEVIELPIKHPELFDALGI 180
Query: 243 AQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASL 302
AQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA
Sbjct: 181 AQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA-- 238
Query: 303 KKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQR 362
REHAPSIIFMDEIDSIGS+R+E+G GDSEVQR
Sbjct: 239 ---------------------------REHAPSIIFMDEIDSIGSARLETGR-GDSEVQR 270
Query: 363 TMLELLNQLDGFEATK 378
TMLELLNQLDGFEATK
Sbjct: 271 TMLELLNQLDGFEATK 286
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/46 (97%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR
Sbjct: 194 TGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 239
>gi|119614675|gb|EAW94269.1| proteasome (prosome, macropain) 26S subunit, ATPase, 5, isoform
CRA_a [Homo sapiens]
Length = 383
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 241/285 (84%), Positives = 251/285 (88%), Gaps = 29/285 (10%)
Query: 94 QLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHP 153
QLIV +K QNLRRLQAQRNELNAKVR+LREELQLLQEQGSYVGEVV+ MDKKKVLVKVHP
Sbjct: 9 QLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRAMDKKKVLVKVHP 68
Query: 154 EGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMV 213
EGKFVVD+DKNIDINDVTPNCRVALRN+SYTLHKILPNKVDPLVSLMMVEKVPDSTYEM+
Sbjct: 69 EGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMI 128
Query: 214 GGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTF 273
GGLD QIKEIKEVIELPVKHPELF+ALGIAQPKGVLLYGPPGTGKTLLARAVAHHT+CTF
Sbjct: 129 GGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTF 188
Query: 274 IRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHA 333
IRVSGSELVQKFIGEG+RMVRELFVMA REHA
Sbjct: 189 IRVSGSELVQKFIGEGARMVRELFVMA-----------------------------REHA 219
Query: 334 PSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
PSIIFMDEIDSIGSSR+E GSGGDSEVQRTMLELLNQLDGFEATK
Sbjct: 220 PSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATK 264
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 49/68 (72%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMAR S MD
Sbjct: 171 TGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPS----IIFMD 226
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 227 EIDSIGSS 234
>gi|2564007|dbj|BAA22935.1| proteasome p45/SUG [Rattus norvegicus]
Length = 374
Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust.
Identities = 240/284 (84%), Positives = 250/284 (88%), Gaps = 29/284 (10%)
Query: 95 LIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPE 154
LIV +K QNLRRLQAQRNELNAKVR+LREELQLLQEQGSYVGEVV+ MDKKKVLVKVHPE
Sbjct: 1 LIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRAMDKKKVLVKVHPE 60
Query: 155 GKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVG 214
GKFVVD+DKNIDINDVTPNCRVALRN+SYTLHKILPNKVDPLVSLMMVEKVPDSTYEM+G
Sbjct: 61 GKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIG 120
Query: 215 GLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFI 274
GLD QIKEIKEVIELPVKHPELF+ALGIAQPKGVLLYGPPGTGKTLLARAVAHHT+CTFI
Sbjct: 121 GLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFI 180
Query: 275 RVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAP 334
RVSGSELVQKFIGEG+RMVRELFVMA REHAP
Sbjct: 181 RVSGSELVQKFIGEGARMVRELFVMA-----------------------------REHAP 211
Query: 335 SIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
SIIFMDEIDSIGSSR+E GSGGDSEVQRTMLELLNQLDGFEATK
Sbjct: 212 SIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATK 255
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/68 (72%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMAR S MD
Sbjct: 162 TGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPS----IIFMD 217
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 218 EIDSIGSS 225
>gi|449464342|ref|XP_004149888.1| PREDICTED: 26S protease regulatory subunit 8 homolog A-like
[Cucumis sativus]
gi|449521908|ref|XP_004167971.1| PREDICTED: 26S protease regulatory subunit 8 homolog A-like
[Cucumis sativus]
Length = 418
Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust.
Identities = 226/305 (74%), Positives = 250/305 (81%), Gaps = 30/305 (9%)
Query: 74 EAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGS 133
+A K EG + YY+ I E QL V +K NL RL+AQRNELN+KVRMLREELQLLQE GS
Sbjct: 23 QATKQGEGLRQYYLQHIHEHQLQVRQKTHNLNRLEAQRNELNSKVRMLREELQLLQEPGS 82
Query: 134 YVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKV 193
YVGEVVK M K KVLVKVHPEGK+VVDIDK+IDI +TP+ RVALRN+SY LH +LP+KV
Sbjct: 83 YVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYVLHLVLPSKV 142
Query: 194 DPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGP 253
DPLV+LM VEKVPDSTY+M+GGLD QIKEIKEVIELP+KHPELF++LGIAQPKGVLLYGP
Sbjct: 143 DPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGP 202
Query: 254 PGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLL 313
PGTGKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 203 PGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMA------------- 249
Query: 314 FWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSG-GDSEVQRTMLELLNQLD 372
REHAPSIIFMDEIDSIGS+R+ESGSG GDSEVQRTMLELLNQLD
Sbjct: 250 ----------------REHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLD 293
Query: 373 GFEAT 377
GFEA+
Sbjct: 294 GFEAS 298
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 43/46 (93%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMAR
Sbjct: 205 TGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAR 250
>gi|442539518|gb|AGC54442.1| 26S proteasome ATPase regulatory subunit 6 [Nicotiana tabacum]
Length = 417
Score = 449 bits (1156), Expect = e-124, Method: Compositional matrix adjust.
Identities = 226/305 (74%), Positives = 251/305 (82%), Gaps = 30/305 (9%)
Query: 74 EAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGS 133
+A K EG + YY+ I +LQL V +K NL RL+AQRNELN+KVRML+EELQLLQE GS
Sbjct: 22 KATKQGEGLRQYYMQHIHDLQLQVRQKTHNLNRLEAQRNELNSKVRMLKEELQLLQEPGS 81
Query: 134 YVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKV 193
YVGEVVK M K KVLVKVHPEGK+VVDIDK+IDI +TP+ RVALRN+SY LH ILP+KV
Sbjct: 82 YVGEVVKVMGKSKVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYVLHLILPSKV 141
Query: 194 DPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGP 253
DPLV+LM VEKVPDSTY+M+GGLD QIKEIKEVIELP+KHPELF++LGIAQPKGVLLYGP
Sbjct: 142 DPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGP 201
Query: 254 PGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLL 313
PGTGKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 202 PGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMA------------- 248
Query: 314 FWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSG-GDSEVQRTMLELLNQLD 372
REHAPSIIFMDEIDSIGS+R+ESGSG GDSEVQRTMLELLNQLD
Sbjct: 249 ----------------REHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLD 292
Query: 373 GFEAT 377
GFEA+
Sbjct: 293 GFEAS 297
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 43/46 (93%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMAR
Sbjct: 204 TGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAR 249
>gi|118487039|gb|ABK95350.1| unknown [Populus trichocarpa]
Length = 426
Score = 449 bits (1155), Expect = e-124, Method: Compositional matrix adjust.
Identities = 225/304 (74%), Positives = 250/304 (82%), Gaps = 30/304 (9%)
Query: 75 AIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSY 134
A++ EG K YY+ I ELQL+V +K NL RL+AQRN LN++VRMLREE QLLQE GSY
Sbjct: 32 AVRQGEGLKQYYLQHIHELQLLVRQKSHNLNRLEAQRNGLNSRVRMLREESQLLQEPGSY 91
Query: 135 VGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVD 194
VGEVVK M K KVLVKVHPEGK+VVDIDK+IDI +TP+ RVALRN+SY LH ILP+KVD
Sbjct: 92 VGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYVLHLILPSKVD 151
Query: 195 PLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPP 254
PLV+LM VEKVPDSTY+M+GGLD QIKEIKEVIELP+KHPELF++LGIAQPKGVLLYGPP
Sbjct: 152 PLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPP 211
Query: 255 GTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLF 314
GTGKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 212 GTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMA-------------- 257
Query: 315 WSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSG-GDSEVQRTMLELLNQLDG 373
REHAPSIIFMDEIDSIGS+R+ESGSG GDSEVQRTMLELLNQLDG
Sbjct: 258 ---------------REHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDG 302
Query: 374 FEAT 377
FEA+
Sbjct: 303 FEAS 306
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/46 (93%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMAR
Sbjct: 213 TGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAR 258
>gi|388492186|gb|AFK34159.1| unknown [Medicago truncatula]
Length = 417
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 225/302 (74%), Positives = 248/302 (82%), Gaps = 30/302 (9%)
Query: 77 KSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVG 136
K EG + YY I ELQL+ +K NL RL+AQRNELN++VRMLREELQLLQE GSYVG
Sbjct: 25 KQGEGLRQYYTQHIHELQLLQRQKTHNLNRLEAQRNELNSRVRMLREELQLLQEPGSYVG 84
Query: 137 EVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPL 196
EVVK M K KVLVKVHPEGK+VVDIDKNIDI +TP+ RVALRN+SY LH +LP+KVDPL
Sbjct: 85 EVVKVMGKNKVLVKVHPEGKYVVDIDKNIDITKITPSTRVALRNDSYVLHLVLPSKVDPL 144
Query: 197 VSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGT 256
V+LM VEKVPDSTY+M+GGLD QIKEIKEVIELP+KHPELF++LGIAQPKGVLLYGPPGT
Sbjct: 145 VNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGT 204
Query: 257 GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWS 316
GKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 205 GKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMA---------------- 248
Query: 317 LLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSG-GDSEVQRTMLELLNQLDGFE 375
REHAPSIIFMDEIDSIGS+R+ESGSG GDSEVQRTMLELLNQLDGFE
Sbjct: 249 -------------REHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFE 295
Query: 376 AT 377
A+
Sbjct: 296 AS 297
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/46 (93%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMAR
Sbjct: 204 TGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAR 249
>gi|224111360|ref|XP_002315825.1| predicted protein [Populus trichocarpa]
gi|222864865|gb|EEF01996.1| predicted protein [Populus trichocarpa]
Length = 409
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 225/304 (74%), Positives = 250/304 (82%), Gaps = 30/304 (9%)
Query: 75 AIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSY 134
A++ EG K YY+ I ELQL+V +K NL RL+AQRN LN++VRMLREE QLLQE GSY
Sbjct: 15 AVRQGEGLKQYYLQHIHELQLLVRQKSHNLNRLEAQRNGLNSRVRMLREESQLLQEPGSY 74
Query: 135 VGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVD 194
VGEVVK M K KVLVKVHPEGK+VVDIDK+IDI +TP+ RVALRN+SY LH ILP+KVD
Sbjct: 75 VGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYVLHLILPSKVD 134
Query: 195 PLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPP 254
PLV+LM VEKVPDSTY+M+GGLD QIKEIKEVIELP+KHPELF++LGIAQPKGVLLYGPP
Sbjct: 135 PLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPP 194
Query: 255 GTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLF 314
GTGKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 195 GTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMA-------------- 240
Query: 315 WSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSG-GDSEVQRTMLELLNQLDG 373
REHAPSIIFMDEIDSIGS+R+ESGSG GDSEVQRTMLELLNQLDG
Sbjct: 241 ---------------REHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDG 285
Query: 374 FEAT 377
FEA+
Sbjct: 286 FEAS 289
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/46 (93%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMAR
Sbjct: 196 TGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAR 241
>gi|224285939|gb|ACN40682.1| unknown [Picea sitchensis]
Length = 433
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 227/332 (68%), Positives = 258/332 (77%), Gaps = 30/332 (9%)
Query: 47 RMVRELFVMARCKGSSRGTEFFTMDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRR 106
R +L A K + + ++ +K EG + YY+ I +LQL V +K NL R
Sbjct: 11 RQASDLEAAANAKEKLKEKHQLLKESNKMVKQGEGLRQYYLQHIHDLQLQVRQKTHNLNR 70
Query: 107 LQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNID 166
L+AQRN+LN+KVR LREELQLLQE GSYVGEVVK M K KVLVKVHPEGK+VVD+DKNID
Sbjct: 71 LEAQRNDLNSKVRALREELQLLQEPGSYVGEVVKVMGKSKVLVKVHPEGKYVVDVDKNID 130
Query: 167 INDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEV 226
I +TP+ RVALRN+SY LH ILP+KVDPLV+LM VEKVPDSTY+M+GGLD QIKEIKEV
Sbjct: 131 ITKITPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEV 190
Query: 227 IELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFI 286
IELP+KHPELF++LGIAQPKGVLLYGPPGTGKTLLARAVAHHT+CTFIRVSGSELVQK+I
Sbjct: 191 IELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYI 250
Query: 287 GEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIG 346
GEGSRMVRELFVMA REHAPSIIFMDEIDSIG
Sbjct: 251 GEGSRMVRELFVMA-----------------------------REHAPSIIFMDEIDSIG 281
Query: 347 SSRIESGSG-GDSEVQRTMLELLNQLDGFEAT 377
S+R+ESG+G GDSEVQRTMLELLNQLDGFEA+
Sbjct: 282 SARMESGTGNGDSEVQRTMLELLNQLDGFEAS 313
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 43/46 (93%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMAR
Sbjct: 220 TGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAR 265
>gi|442539516|gb|AGC54441.1| 26S proteasome ATPase regulatory subunit 6 [Capsicum annuum]
Length = 417
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 226/305 (74%), Positives = 249/305 (81%), Gaps = 30/305 (9%)
Query: 74 EAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGS 133
+A K EG + YY+ I +LQL V K NL RL+AQRNELN+KVRML+EELQLLQE GS
Sbjct: 22 KATKQGEGLRQYYMQHIHDLQLQVRHKTHNLNRLEAQRNELNSKVRMLKEELQLLQEPGS 81
Query: 134 YVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKV 193
YVGEVVK M K KVLVKVHPEGK+VVDIDK IDI +TP+ RVALRN+SY LH ILP+KV
Sbjct: 82 YVGEVVKVMGKSKVLVKVHPEGKYVVDIDKTIDITKITPSTRVALRNDSYVLHLILPSKV 141
Query: 194 DPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGP 253
DPLV+LM VEKVPDSTY+M+GGLD QIKEIKEVIELP+KHPELF++LGIAQPKGVLLYGP
Sbjct: 142 DPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGP 201
Query: 254 PGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLL 313
PGTGKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 202 PGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMA------------- 248
Query: 314 FWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSG-GDSEVQRTMLELLNQLD 372
REHAPSIIFMDEIDSIGS+R+ESGSG GDSEVQRTMLELLNQLD
Sbjct: 249 ----------------REHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLD 292
Query: 373 GFEAT 377
GFEA+
Sbjct: 293 GFEAS 297
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/46 (93%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMAR
Sbjct: 204 TGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAR 249
>gi|297808063|ref|XP_002871915.1| ATSUG1 [Arabidopsis lyrata subsp. lyrata]
gi|297317752|gb|EFH48174.1| ATSUG1 [Arabidopsis lyrata subsp. lyrata]
Length = 419
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 225/304 (74%), Positives = 250/304 (82%), Gaps = 30/304 (9%)
Query: 75 AIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSY 134
A K EG K YY+ I ELQ ++ +K NL RL+AQRNELN++VRMLREELQLLQE GSY
Sbjct: 25 AAKQGEGLKQYYLQHIHELQRLLRQKTNNLNRLEAQRNELNSRVRMLREELQLLQEPGSY 84
Query: 135 VGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVD 194
VGEVVK M K KVLVKVHPEGK+VVDIDK+IDI +TP+ RVALRN+SY LH +LP+KVD
Sbjct: 85 VGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKLTPSTRVALRNDSYVLHLVLPSKVD 144
Query: 195 PLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPP 254
PLV+LM VEKVPDSTY+M+GGLD QIKEIKEVIELP+KHPELF++LGIAQPKGVLLYGPP
Sbjct: 145 PLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPP 204
Query: 255 GTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLF 314
GTGKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 205 GTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMA-------------- 250
Query: 315 WSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSG-GDSEVQRTMLELLNQLDG 373
REHAPSIIFMDEIDSIGS+R+ESGSG GDSEVQRTMLELLNQLDG
Sbjct: 251 ---------------REHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDG 295
Query: 374 FEAT 377
FEA+
Sbjct: 296 FEAS 299
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/46 (93%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMAR
Sbjct: 206 TGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAR 251
>gi|225430151|ref|XP_002284747.1| PREDICTED: 26S protease regulatory subunit 8 homolog A [Vitis
vinifera]
gi|296081963|emb|CBI20968.3| unnamed protein product [Vitis vinifera]
Length = 420
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 223/302 (73%), Positives = 249/302 (82%), Gaps = 30/302 (9%)
Query: 77 KSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVG 136
K +G + YY+ I +LQL V +K NL RL+AQRN+LN++VRMLREELQLLQE GSYVG
Sbjct: 28 KQGDGLRQYYLQHIHDLQLQVRQKSHNLNRLEAQRNDLNSRVRMLREELQLLQEPGSYVG 87
Query: 137 EVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPL 196
EVVK M K KVLVKVHPEGK+VVDIDKNIDI +TP+ RVALRN+SY LH ILP+KVDPL
Sbjct: 88 EVVKVMGKSKVLVKVHPEGKYVVDIDKNIDITKITPSTRVALRNDSYVLHLILPSKVDPL 147
Query: 197 VSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGT 256
V+LM VEKVPDSTY+M+GGLD QIKEIKEVIELP+KHPELF++LGIAQPKGVLLYGPPGT
Sbjct: 148 VNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGT 207
Query: 257 GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWS 316
GKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 208 GKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMA---------------- 251
Query: 317 LLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSG-GDSEVQRTMLELLNQLDGFE 375
REHAPSIIFMDEIDSIGS+R+ESG+G GDSEVQRTMLELLNQLDGFE
Sbjct: 252 -------------REHAPSIIFMDEIDSIGSARMESGTGNGDSEVQRTMLELLNQLDGFE 298
Query: 376 AT 377
A+
Sbjct: 299 AS 300
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 43/46 (93%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMAR
Sbjct: 207 TGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAR 252
>gi|297808061|ref|XP_002871914.1| ATSUG1 [Arabidopsis lyrata subsp. lyrata]
gi|297317751|gb|EFH48173.1| ATSUG1 [Arabidopsis lyrata subsp. lyrata]
Length = 419
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 225/304 (74%), Positives = 249/304 (81%), Gaps = 30/304 (9%)
Query: 75 AIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSY 134
A K EG K YY+ I ELQ + +K NL RL+AQRNELN++VRMLREELQLLQE GSY
Sbjct: 25 AAKQGEGLKQYYLQHIHELQRQLRQKTNNLNRLEAQRNELNSRVRMLREELQLLQEPGSY 84
Query: 135 VGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVD 194
VGEVVK M K KVLVKVHPEGK+VVDIDK+IDI +TP+ RVALRN+SY LH +LP+KVD
Sbjct: 85 VGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYVLHLVLPSKVD 144
Query: 195 PLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPP 254
PLV+LM VEKVPDSTY+M+GGLD QIKEIKEVIELP+KHPELF++LGIAQPKGVLLYGPP
Sbjct: 145 PLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPP 204
Query: 255 GTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLF 314
GTGKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 205 GTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMA-------------- 250
Query: 315 WSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSG-GDSEVQRTMLELLNQLDG 373
REHAPSIIFMDEIDSIGS+R+ESGSG GDSEVQRTMLELLNQLDG
Sbjct: 251 ---------------REHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDG 295
Query: 374 FEAT 377
FEA+
Sbjct: 296 FEAS 299
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 43/46 (93%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMAR
Sbjct: 206 TGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAR 251
>gi|18420092|ref|NP_568389.1| regulatory particle triple-A ATPase 6A [Arabidopsis thaliana]
gi|75168996|sp|Q9C5U3.1|PRS8A_ARATH RecName: Full=26S protease regulatory subunit 8 homolog A; AltName:
Full=26S proteasome AAA-ATPase subunit RPT6a; AltName:
Full=26S proteasome subunit 8 homolog A; AltName:
Full=Regulatory particle triple-A ATPase subunit 6a
gi|13537115|dbj|BAB40755.1| AtSUG1 [Arabidopsis thaliana]
gi|17473854|gb|AAL38350.1| unknown protein [Arabidopsis thaliana]
gi|32306505|gb|AAP78936.1| At5g19990 [Arabidopsis thaliana]
gi|332005394|gb|AED92777.1| regulatory particle triple-A ATPase 6A [Arabidopsis thaliana]
Length = 419
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 225/304 (74%), Positives = 249/304 (81%), Gaps = 30/304 (9%)
Query: 75 AIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSY 134
A K EG K YY+ I ELQ + +K NL RL+AQRNELN++VRMLREELQLLQE GSY
Sbjct: 25 AAKQGEGLKQYYLQHIHELQRQLRQKTNNLNRLEAQRNELNSRVRMLREELQLLQEPGSY 84
Query: 135 VGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVD 194
VGEVVK M K KVLVKVHPEGK+VVDIDK+IDI +TP+ RVALRN+SY LH +LP+KVD
Sbjct: 85 VGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYVLHLVLPSKVD 144
Query: 195 PLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPP 254
PLV+LM VEKVPDSTY+M+GGLD QIKEIKEVIELP+KHPELF++LGIAQPKGVLLYGPP
Sbjct: 145 PLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPP 204
Query: 255 GTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLF 314
GTGKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 205 GTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMA-------------- 250
Query: 315 WSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSG-GDSEVQRTMLELLNQLDG 373
REHAPSIIFMDEIDSIGS+R+ESGSG GDSEVQRTMLELLNQLDG
Sbjct: 251 ---------------REHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDG 295
Query: 374 FEAT 377
FEA+
Sbjct: 296 FEAS 299
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 43/46 (93%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMAR
Sbjct: 206 TGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAR 251
>gi|6652888|gb|AAF22526.1|AF123395_1 26S proteasome AAA-ATPase subunit RPT6a [Arabidopsis thaliana]
Length = 405
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 225/304 (74%), Positives = 249/304 (81%), Gaps = 30/304 (9%)
Query: 75 AIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSY 134
A K EG K YY+ I ELQ + +K NL RL+AQRNELN++VRMLREELQLLQE GSY
Sbjct: 11 AAKQGEGLKQYYLQHIHELQRQLRQKTNNLNRLEAQRNELNSRVRMLREELQLLQEPGSY 70
Query: 135 VGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVD 194
VGEVVK M K KVLVKVHPEGK+VVDIDK+IDI +TP+ RVALRN+SY LH +LP+KVD
Sbjct: 71 VGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYVLHLVLPSKVD 130
Query: 195 PLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPP 254
PLV+LM VEKVPDSTY+M+GGLD QIKEIKEVIELP+KHPELF++LGIAQPKGVLLYGPP
Sbjct: 131 PLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPP 190
Query: 255 GTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLF 314
GTGKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 191 GTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMA-------------- 236
Query: 315 WSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSG-GDSEVQRTMLELLNQLDG 373
REHAPSIIFMDEIDSIGS+R+ESGSG GDSEVQRTMLELLNQLDG
Sbjct: 237 ---------------REHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDG 281
Query: 374 FEAT 377
FEA+
Sbjct: 282 FEAS 285
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 43/46 (93%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMAR
Sbjct: 192 TGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAR 237
>gi|90077142|dbj|BAE88251.1| unnamed protein product [Macaca fascicularis]
Length = 416
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 238/302 (78%), Positives = 253/302 (83%), Gaps = 29/302 (9%)
Query: 77 KSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVG 136
+ + F +++ IV +K QNLRRLQAQRNELNAKVR+LREELQLLQEQGSYVG
Sbjct: 25 RQAADFANIICPRLKNSSXIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVG 84
Query: 137 EVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPL 196
EVV+ MDKKKVLVKVHPEGKFVVD+DKNIDINDVTPNCRVALRN+SYTLHKILPNKVDPL
Sbjct: 85 EVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPL 144
Query: 197 VSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGT 256
VSLMMVEKVPDSTYEM+GGLD QIKEIKEVIELPVKHPELF+ALGIAQPKGVLLYGPPGT
Sbjct: 145 VSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGT 204
Query: 257 GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWS 316
KTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMA
Sbjct: 205 XKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMA---------------- 248
Query: 317 LLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
REHAPSIIFM EIDSIGSSR+E GSGGDSEVQRTMLELLNQLDGFEA
Sbjct: 249 -------------REHAPSIIFMGEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEA 295
Query: 377 TK 378
TK
Sbjct: 296 TK 297
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 42/44 (95%), Positives = 44/44 (100%)
Query: 14 KTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
KTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMAR
Sbjct: 206 KTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAR 249
>gi|194765156|ref|XP_001964693.1| GF23322 [Drosophila ananassae]
gi|190614965|gb|EDV30489.1| GF23322 [Drosophila ananassae]
Length = 402
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 239/301 (79%), Positives = 257/301 (85%), Gaps = 30/301 (9%)
Query: 78 SSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGE 137
S GF Y+ KI ELQ IV E++++L RLQAQRNELN+KVR+LREELQLLQEQGSY+GE
Sbjct: 13 SGPGFHSYFTQKISELQFIVMERQKDLLRLQAQRNELNSKVRLLREELQLLQEQGSYIGE 72
Query: 138 VVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLV 197
VVKPMDK KVLVKVHPEGK+VVD+DK+I+I DVTP+ RVALRNESYTLHKILPNKVDPLV
Sbjct: 73 VVKPMDKNKVLVKVHPEGKYVVDVDKSINIKDVTPSSRVALRNESYTLHKILPNKVDPLV 132
Query: 198 SLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTG 257
SLM+VEKVPDSTYEMVGGLD QI+EIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTG
Sbjct: 133 SLMLVEKVPDSTYEMVGGLDKQIQEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTG 192
Query: 258 KTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSL 317
KTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA
Sbjct: 193 KTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA----------------- 235
Query: 318 LTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEAT 377
REHAPSIIFMDEIDSIGSSR+E+G+ GDSEVQRTMLELLNQLDGFEAT
Sbjct: 236 ------------REHAPSIIFMDEIDSIGSSRLETGT-GDSEVQRTMLELLNQLDGFEAT 282
Query: 378 K 378
K
Sbjct: 283 K 283
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/68 (75%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR S MD
Sbjct: 191 TGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPS----IIFMD 246
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 247 EIDSIGSS 254
>gi|6752880|gb|AAF27916.1|AF220199_1 26S proteasome regulatory subunit 8 [Pinus taeda]
Length = 433
Score = 446 bits (1148), Expect = e-123, Method: Compositional matrix adjust.
Identities = 223/303 (73%), Positives = 249/303 (82%), Gaps = 30/303 (9%)
Query: 76 IKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYV 135
+K EG + YY+ I +LQL V +K NL RL+AQRN+LN+KVR LREELQLLQE GSYV
Sbjct: 40 VKHGEGLRQYYLQHIHDLQLQVRQKTHNLNRLEAQRNDLNSKVRALREELQLLQEPGSYV 99
Query: 136 GEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDP 195
GEVVK M K KVLVKVHPEGK+VVD+DKNIDI +TP+ RVALRN+SY LH ILP+KVDP
Sbjct: 100 GEVVKVMGKSKVLVKVHPEGKYVVDVDKNIDITKITPSTRVALRNDSYVLHLILPSKVDP 159
Query: 196 LVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPG 255
LV+LM VEKVPDSTY+M+GGLD QIKEIKEVIELP+KHPELF++LGIAQPKGVLLYGPPG
Sbjct: 160 LVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPG 219
Query: 256 TGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFW 315
TGKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 220 TGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMA--------------- 264
Query: 316 SLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSG-GDSEVQRTMLELLNQLDGF 374
REHAPSIIFMDEIDSIGS+R+ESG+G GDSEVQRTMLELLNQLDGF
Sbjct: 265 --------------REHAPSIIFMDEIDSIGSARMESGTGNGDSEVQRTMLELLNQLDGF 310
Query: 375 EAT 377
EA+
Sbjct: 311 EAS 313
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 43/46 (93%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMAR
Sbjct: 220 TGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAR 265
>gi|225442805|ref|XP_002285273.1| PREDICTED: 26S protease regulatory subunit 8 homolog A [Vitis
vinifera]
gi|297743378|emb|CBI36245.3| unnamed protein product [Vitis vinifera]
Length = 417
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 224/302 (74%), Positives = 248/302 (82%), Gaps = 30/302 (9%)
Query: 77 KSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVG 136
+ EG K YY+ +LQL V +K NL RL+AQRN+LN++VRMLREELQLLQE GSYVG
Sbjct: 25 QQGEGLKQYYLQHNHDLQLQVRQKAHNLNRLEAQRNDLNSRVRMLREELQLLQEPGSYVG 84
Query: 137 EVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPL 196
EVVK M K KVLVKVHPEGK+VVDIDKNIDI +TP+ RVALRN+SY LH ILP+KVDPL
Sbjct: 85 EVVKVMGKSKVLVKVHPEGKYVVDIDKNIDITKITPSTRVALRNDSYVLHLILPSKVDPL 144
Query: 197 VSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGT 256
V+LM VEKVPDSTY+M+GGLD QIKEIKEVIELP+KHPELF++LGIAQPKGVLLYGPPGT
Sbjct: 145 VNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGT 204
Query: 257 GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWS 316
GKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 205 GKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMA---------------- 248
Query: 317 LLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSG-GDSEVQRTMLELLNQLDGFE 375
REHAPSIIFMDEIDSIGS+R+ESGSG GDSEVQRTMLELLNQLDGFE
Sbjct: 249 -------------REHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFE 295
Query: 376 AT 377
A+
Sbjct: 296 AS 297
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 43/46 (93%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMAR
Sbjct: 204 TGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAR 249
>gi|167536758|ref|XP_001750050.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771560|gb|EDQ85225.1| predicted protein [Monosiga brevicollis MX1]
Length = 418
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 227/306 (74%), Positives = 253/306 (82%), Gaps = 33/306 (10%)
Query: 77 KSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVG 136
KS+ G Y+VTKI+ L+++VAEK QNLRRL+AQRNELNAKVR LREEL LLQE SYVG
Sbjct: 23 KSAAGVNDYFVTKIDALKVVVAEKTQNLRRLEAQRNELNAKVRALREELVLLQEPASYVG 82
Query: 137 EVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPL 196
EV K M KKKVLVKV PEGK+VVD+DK+ID+ ++PN RVALR++SYTLHKILPNK+DPL
Sbjct: 83 EVAKVMGKKKVLVKVQPEGKYVVDLDKSIDVGKLSPNTRVALRSDSYTLHKILPNKIDPL 142
Query: 197 VSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGT 256
VSLMM+EKVPDSTY+MVGGLD QIKEIKEVIELPVKHPELF+ALGIAQPKGVLLYGPPGT
Sbjct: 143 VSLMMLEKVPDSTYDMVGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGT 202
Query: 257 GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWS 316
GKTLLARAVAHHT+C+FIRVSG+ELVQK+IGEG+RMVRELFVMA
Sbjct: 203 GKTLLARAVAHHTDCSFIRVSGAELVQKYIGEGARMVRELFVMA---------------- 246
Query: 317 LLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIES----GSGGDSEVQRTMLELLNQLD 372
REHAPSIIFMDEIDSIGS+R ES G GGDSEVQRTMLELLNQLD
Sbjct: 247 -------------REHAPSIIFMDEIDSIGSTRSESGGGGGGGGDSEVQRTMLELLNQLD 293
Query: 373 GFEATK 378
GFEAT+
Sbjct: 294 GFEATQ 299
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 40/46 (86%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+C+FIRVSG+ELVQK+IGEG+RMVRELFVMAR
Sbjct: 202 TGKTLLARAVAHHTDCSFIRVSGAELVQKYIGEGARMVRELFVMAR 247
>gi|359806735|ref|NP_001241552.1| uncharacterized protein LOC100812783 [Glycine max]
gi|255639529|gb|ACU20059.1| unknown [Glycine max]
Length = 418
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 223/302 (73%), Positives = 248/302 (82%), Gaps = 30/302 (9%)
Query: 77 KSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVG 136
K EG + YY I E QL++ +K NL RL+AQRN+LN++VRMLREELQLLQE GSYVG
Sbjct: 26 KQGEGLRHYYSLNIHEHQLLLRQKTHNLNRLEAQRNDLNSRVRMLREELQLLQEPGSYVG 85
Query: 137 EVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPL 196
EVVK M K KVLVKVHPEGK+VVDIDKNIDI +TP+ RVALRN+SY LH +LP+KVDPL
Sbjct: 86 EVVKVMGKNKVLVKVHPEGKYVVDIDKNIDITKITPSTRVALRNDSYVLHLVLPSKVDPL 145
Query: 197 VSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGT 256
V+LM VEKVPDSTY+M+GGLD QIKEIKEVIELP+KHPELF++LGIAQPKGVLLYGPPGT
Sbjct: 146 VNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGT 205
Query: 257 GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWS 316
GKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 206 GKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMA---------------- 249
Query: 317 LLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSG-GDSEVQRTMLELLNQLDGFE 375
REHAPSIIFMDEIDSIGS+R+ESGSG GDSEVQRTMLELLNQLDGFE
Sbjct: 250 -------------REHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFE 296
Query: 376 AT 377
A+
Sbjct: 297 AS 298
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/46 (93%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMAR
Sbjct: 205 TGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAR 250
>gi|15241241|ref|NP_197500.1| AAA-type ATPase family protein [Arabidopsis thaliana]
gi|75165109|sp|Q94BQ2.1|PRS8B_ARATH RecName: Full=26S protease regulatory subunit 8 homolog B; AltName:
Full=26S proteasome AAA-ATPase subunit RPT6b; AltName:
Full=26S proteasome subunit 8 homolog B; AltName:
Full=Regulatory particle triple-A ATPase subunit 6b
gi|14532682|gb|AAK64142.1| putative 26S proteasome AAA-ATPase subunit RPT6a [Arabidopsis
thaliana]
gi|19310807|gb|AAL85134.1| putative 26S proteasome AAA-ATPase subunit RPT6a [Arabidopsis
thaliana]
gi|21593097|gb|AAM65046.1| 26S proteasome AAA-ATPase subunit RPT6a-like protein [Arabidopsis
thaliana]
gi|110740531|dbj|BAE98371.1| 26S proteasome AAA-ATPase subunit RPT6a - like protein [Arabidopsis
thaliana]
gi|332005395|gb|AED92778.1| AAA-type ATPase family protein [Arabidopsis thaliana]
Length = 419
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 224/304 (73%), Positives = 249/304 (81%), Gaps = 30/304 (9%)
Query: 75 AIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSY 134
A K EG YY+ ++ELQ + EK NL RL+AQRNELN++VRMLREELQLLQE GSY
Sbjct: 25 AAKQGEGLNKYYLQHLDELQRLQREKSYNLNRLEAQRNELNSRVRMLREELQLLQEPGSY 84
Query: 135 VGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVD 194
VGEVVK M K KVLVKVHPEGK+VVDIDK+IDI +TP+ RVALRN+SY LH +LP+KVD
Sbjct: 85 VGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKLTPSTRVALRNDSYVLHLVLPSKVD 144
Query: 195 PLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPP 254
PLV+LM VEKVPDSTY+M+GGLD QIKEIKEVIELP+KHPELF++LGIAQPKGVLLYGPP
Sbjct: 145 PLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPP 204
Query: 255 GTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLF 314
GTGKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 205 GTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMA-------------- 250
Query: 315 WSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSG-GDSEVQRTMLELLNQLDG 373
REHAPSIIFMDEIDSIGS+R+ESGSG GDSEVQRTMLELLNQLDG
Sbjct: 251 ---------------REHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDG 295
Query: 374 FEAT 377
FEA+
Sbjct: 296 FEAS 299
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 43/46 (93%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMAR
Sbjct: 206 TGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAR 251
>gi|24651451|ref|NP_651811.1| Rpt6R [Drosophila melanogaster]
gi|7301963|gb|AAF57069.1| Rpt6R [Drosophila melanogaster]
gi|21430822|gb|AAM51089.1| SD17676p [Drosophila melanogaster]
gi|220959236|gb|ACL92161.1| CG2241-PA [synthetic construct]
Length = 399
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 238/302 (78%), Positives = 254/302 (84%), Gaps = 30/302 (9%)
Query: 77 KSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVG 136
+ SEGF YY KI ELQ V E+++NL RLQAQRNELN KVR+LREELQLLQEQGSY+
Sbjct: 9 EGSEGFHSYYTQKISELQFTVNERQKNLLRLQAQRNELNLKVRLLREELQLLQEQGSYIA 68
Query: 137 EVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPL 196
EVVKPMDK KVLVKVHPEGK+VVD+DK I+I DVTP+ RVALRNESYTLHKILPNKVDPL
Sbjct: 69 EVVKPMDKNKVLVKVHPEGKYVVDVDKTINIKDVTPSSRVALRNESYTLHKILPNKVDPL 128
Query: 197 VSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGT 256
VSLM+VEKVPDSTYEMVGGLD QI+EIKEVIELPVKHPELFDALGI QPKGVLLYGPPGT
Sbjct: 129 VSLMLVEKVPDSTYEMVGGLDKQIQEIKEVIELPVKHPELFDALGITQPKGVLLYGPPGT 188
Query: 257 GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWS 316
GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA
Sbjct: 189 GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA---------------- 232
Query: 317 LLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
REHAPSIIFMDEIDSIGS+R+E+G+ GDSEVQRTMLELLNQLDGFEA
Sbjct: 233 -------------REHAPSIIFMDEIDSIGSARLETGT-GDSEVQRTMLELLNQLDGFEA 278
Query: 377 TK 378
TK
Sbjct: 279 TK 280
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/46 (97%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR
Sbjct: 188 TGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 233
>gi|195341572|ref|XP_002037380.1| GM12144 [Drosophila sechellia]
gi|194131496|gb|EDW53539.1| GM12144 [Drosophila sechellia]
Length = 400
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 238/308 (77%), Positives = 257/308 (83%), Gaps = 30/308 (9%)
Query: 71 DVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQE 130
D+ + S+GF Y+ KI ELQ V E+++NL RLQAQRNELN KVR+LREELQLLQE
Sbjct: 4 DLGAPSEGSDGFHSYFTQKISELQFTVNERQKNLLRLQAQRNELNLKVRLLREELQLLQE 63
Query: 131 QGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILP 190
QGSY+ EVVKPMDK KVLVKVHPEGK+VVD+DK I+I DVTP+ RVALRNESYTLHKILP
Sbjct: 64 QGSYIAEVVKPMDKNKVLVKVHPEGKYVVDVDKTINIKDVTPSSRVALRNESYTLHKILP 123
Query: 191 NKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLL 250
NKVDPLVSLM+VEKVPDSTYEMVGGLD QI+EIKEVIELPVKHPELFDALGIAQPKGVLL
Sbjct: 124 NKVDPLVSLMLVEKVPDSTYEMVGGLDKQIQEIKEVIELPVKHPELFDALGIAQPKGVLL 183
Query: 251 YGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHH 310
YGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA
Sbjct: 184 YGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA---------- 233
Query: 311 PLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQ 370
REHAPSIIFMDEIDSIGS+R+E+G+ GDSEVQRTMLELLNQ
Sbjct: 234 -------------------REHAPSIIFMDEIDSIGSARLETGT-GDSEVQRTMLELLNQ 273
Query: 371 LDGFEATK 378
LDGFEATK
Sbjct: 274 LDGFEATK 281
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/46 (97%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR
Sbjct: 189 TGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 234
>gi|402900768|ref|XP_003913339.1| PREDICTED: 26S protease regulatory subunit 8 [Papio anubis]
Length = 423
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 243/326 (74%), Positives = 260/326 (79%), Gaps = 47/326 (14%)
Query: 70 MDVDEAIKSSEGFKPYYVTKIEELQLIVA-----------------EKEQNLRRLQAQRN 112
M+++E K+ G + YY++KIEELQLI+ AQRN
Sbjct: 9 MELEEG-KAGSGLRQYYLSKIEELQLILTCEVLAKILPPXXXXXXXXXXXXXXXXXAQRN 67
Query: 113 ELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTP 172
ELNAKVR+LREELQLLQEQGSYVGEVV+ MDKKKVLVKVHPEGKFVVD+DKNIDINDVTP
Sbjct: 68 ELNAKVRLLREELQLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTP 127
Query: 173 NCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVK 232
NCRVALRN+SYTLHKILPNKVDPLVSLMMVEKVPDSTYEM+GGLD QIKEIKEVIELPVK
Sbjct: 128 NCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVK 187
Query: 233 HPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRM 292
HPELF+ALGIAQPKGVLLYGPPGTGKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RM
Sbjct: 188 HPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARM 247
Query: 293 VRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIES 352
VRELFVMA REHAPSIIFMDEIDSIGSSR+E
Sbjct: 248 VRELFVMA-----------------------------REHAPSIIFMDEIDSIGSSRLEG 278
Query: 353 GSGGDSEVQRTMLELLNQLDGFEATK 378
GSGGDSEVQRTMLELLNQLDGFEATK
Sbjct: 279 GSGGDSEVQRTMLELLNQLDGFEATK 304
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/68 (72%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMAR S MD
Sbjct: 211 TGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPS----IIFMD 266
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 267 EIDSIGSS 274
>gi|195575129|ref|XP_002105532.1| GD16958 [Drosophila simulans]
gi|194201459|gb|EDX15035.1| GD16958 [Drosophila simulans]
Length = 400
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 237/302 (78%), Positives = 255/302 (84%), Gaps = 30/302 (9%)
Query: 77 KSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVG 136
+ S+GF Y+ KI ELQ V E+++NL RLQAQRNELN KVR+LREELQLLQEQGSY+
Sbjct: 10 EGSDGFHSYFTQKISELQFTVNERQKNLLRLQAQRNELNLKVRLLREELQLLQEQGSYIA 69
Query: 137 EVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPL 196
EVVKPMDK KVLVKVHPEGK+VVD+DK I+I DVTP+ RVALRNESYTLHKILPNKVDPL
Sbjct: 70 EVVKPMDKNKVLVKVHPEGKYVVDVDKTINIKDVTPSSRVALRNESYTLHKILPNKVDPL 129
Query: 197 VSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGT 256
VSLM+VEKVPDSTYEMVGGLD QI+EIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGT
Sbjct: 130 VSLMLVEKVPDSTYEMVGGLDKQIQEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGT 189
Query: 257 GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWS 316
GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA
Sbjct: 190 GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA---------------- 233
Query: 317 LLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
REHAPSIIFMDEIDSIGS+R+E+G+ GDSEVQRTMLELLNQLDGFEA
Sbjct: 234 -------------REHAPSIIFMDEIDSIGSARLETGT-GDSEVQRTMLELLNQLDGFEA 279
Query: 377 TK 378
TK
Sbjct: 280 TK 281
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/46 (97%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR
Sbjct: 189 TGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 234
>gi|224099663|ref|XP_002311569.1| predicted protein [Populus trichocarpa]
gi|222851389|gb|EEE88936.1| predicted protein [Populus trichocarpa]
Length = 407
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 224/304 (73%), Positives = 248/304 (81%), Gaps = 30/304 (9%)
Query: 75 AIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSY 134
A K EG K YY+ I EL L V +K NL RL+AQRN++N++VRMLREELQLLQE GSY
Sbjct: 13 AAKQGEGLKQYYIQHIHELLLHVRQKTHNLNRLEAQRNDINSRVRMLREELQLLQEPGSY 72
Query: 135 VGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVD 194
VGEVVK M K KVLVKVHPEGK+VVDIDK+IDI +TP+ RVALRN+SY LH ILP+KVD
Sbjct: 73 VGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYVLHLILPSKVD 132
Query: 195 PLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPP 254
PLV+LM VEKVPDSTY+M+GGLD QIKEIKEVIELP+KHPELF++LGIAQPKGVLLYGPP
Sbjct: 133 PLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPP 192
Query: 255 GTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLF 314
GTGKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 193 GTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMA-------------- 238
Query: 315 WSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSG-GDSEVQRTMLELLNQLDG 373
R HAPSIIFMDEIDSIGS+R+ESGSG GDSEVQRTMLELLNQLDG
Sbjct: 239 ---------------RSHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDG 283
Query: 374 FEAT 377
FEA+
Sbjct: 284 FEAS 287
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMAR S MD
Sbjct: 194 TGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMARSHAPS----IIFMD 249
Query: 72 VDEAIKSS 79
++I S+
Sbjct: 250 EIDSIGSA 257
>gi|281205166|gb|EFA79359.1| 26S proteasome subunit ATPase 5 [Polysphondylium pallidum PN500]
Length = 412
Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust.
Identities = 225/301 (74%), Positives = 253/301 (84%), Gaps = 14/301 (4%)
Query: 79 SEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEV 138
++G K YYV+KIEEL++ V EK Q+LRRL+AQRNELN +VRML+EELQLL GS+V EV
Sbjct: 6 TKGIKSYYVSKIEELEIKVNEKAQDLRRLEAQRNELNNRVRMLKEELQLLTNPGSHVAEV 65
Query: 139 VKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVS 198
VK M K KVLVKV+PEGKFVVDID +IDI +TP+ R AL++ESYTLH+ILPNK+DPLVS
Sbjct: 66 VKLMGKNKVLVKVNPEGKFVVDIDPSIDIAKLTPSTRAALKHESYTLHRILPNKIDPLVS 125
Query: 199 LMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGK 258
LM VEK+PDSTY+MVGGLD QIKEIKEVIELP+KHPELF++LGIAQPKGVLLYGPPGTGK
Sbjct: 126 LMKVEKIPDSTYDMVGGLDKQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGK 185
Query: 259 TLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLL 318
TLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELF+MAS +
Sbjct: 186 TLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFIMASFNLIILI---------- 235
Query: 319 TILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSG-GDSEVQRTMLELLNQLDGFEAT 377
I N REHAPSIIFMDEIDSIGSSRIE GSG DSEVQRTMLELLNQLDGFE+T
Sbjct: 236 ---FIIITINHREHAPSIIFMDEIDSIGSSRIEGGSGSSDSEVQRTMLELLNQLDGFEST 292
Query: 378 K 378
K
Sbjct: 293 K 293
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 41/45 (91%), Positives = 45/45 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELF+MA
Sbjct: 183 TGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFIMA 227
>gi|326494092|dbj|BAJ85508.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 418
Score = 443 bits (1139), Expect = e-122, Method: Compositional matrix adjust.
Identities = 223/310 (71%), Positives = 253/310 (81%), Gaps = 34/310 (10%)
Query: 73 DEAIKSS----EGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLL 128
DE+ K + EG + YY+ I +LQL + +K NL RL+AQRN+LN++VRMLREELQLL
Sbjct: 18 DESAKGARGGGEGLRQYYLQHIHDLQLQIRQKTHNLNRLEAQRNDLNSRVRMLREELQLL 77
Query: 129 QEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKI 188
QE GSYVGEVVK M K KVLVKVHPEGK+VVDIDK+IDI +TP+ RVALRN+SY LH +
Sbjct: 78 QEPGSYVGEVVKVMGKSKVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYMLHLV 137
Query: 189 LPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGV 248
LP+KVDPLV+LM VEKVPDSTY+M+GGLD QIKEIKEVIELP+KHPELF++LGIAQPKGV
Sbjct: 138 LPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGV 197
Query: 249 LLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFA 308
LLYGPPGTGKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 198 LLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMA-------- 249
Query: 309 HHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSG-GDSEVQRTMLEL 367
REHAPSIIFMDEIDSIGS+R+ESG+G GDSEVQRTMLEL
Sbjct: 250 ---------------------REHAPSIIFMDEIDSIGSARMESGTGNGDSEVQRTMLEL 288
Query: 368 LNQLDGFEAT 377
LNQLDGFEA+
Sbjct: 289 LNQLDGFEAS 298
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 43/46 (93%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMAR
Sbjct: 205 TGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAR 250
>gi|168052699|ref|XP_001778777.1| 26S proteasome regulatory complex, ATPase RPT6 [Physcomitrella
patens subsp. patens]
gi|162669783|gb|EDQ56363.1| 26S proteasome regulatory complex, ATPase RPT6 [Physcomitrella
patens subsp. patens]
Length = 410
Score = 443 bits (1139), Expect = e-122, Method: Compositional matrix adjust.
Identities = 222/306 (72%), Positives = 252/306 (82%), Gaps = 30/306 (9%)
Query: 73 DEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQG 132
+++ +S EG + YY++ I +L L + K NL RL+AQRN+LN+KVRMLREELQLLQE G
Sbjct: 9 NKSARSGEGLRHYYLSHIHDLLLQLRVKTHNLHRLEAQRNDLNSKVRMLREELQLLQEPG 68
Query: 133 SYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNK 192
SYVGEVVK M K KVLVKVHPEGK+VVD+DK+IDIN +TP RVALRN+SY LH ILP+K
Sbjct: 69 SYVGEVVKVMGKTKVLVKVHPEGKYVVDLDKSIDINKITPTTRVALRNDSYVLHLILPSK 128
Query: 193 VDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYG 252
VDPLV+LM VEKVPDSTY+M+GGLD QIKEIKEVIELP+KHPELF++LGIAQPKGVLLYG
Sbjct: 129 VDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYG 188
Query: 253 PPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPL 312
PPGTGKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 189 PPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMA------------ 236
Query: 313 LFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSG-GDSEVQRTMLELLNQL 371
REHAPSIIFMDEIDSIGS+R+ESG+G GDSEVQRTMLELLNQL
Sbjct: 237 -----------------REHAPSIIFMDEIDSIGSARVESGNGNGDSEVQRTMLELLNQL 279
Query: 372 DGFEAT 377
DGFEA+
Sbjct: 280 DGFEAS 285
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/46 (93%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMAR
Sbjct: 192 TGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAR 237
>gi|340370262|ref|XP_003383665.1| PREDICTED: 26S protease regulatory subunit 8-like [Amphimedon
queenslandica]
Length = 398
Score = 442 bits (1138), Expect = e-122, Method: Compositional matrix adjust.
Identities = 236/298 (79%), Positives = 253/298 (84%), Gaps = 29/298 (9%)
Query: 81 GFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVK 140
G YYVTKIE LQL ++EK QNLRRL+AQRNELNAKVR+LREELQLLQEQGS+VGEV+K
Sbjct: 11 GIHQYYVTKIEGLQLNLSEKSQNLRRLEAQRNELNAKVRLLREELQLLQEQGSHVGEVIK 70
Query: 141 PMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLM 200
MDKKKVLVKVHPEGK+VVD+DK I++NDV PNCRVAL+NESY LHKILP KVDPLVSLM
Sbjct: 71 AMDKKKVLVKVHPEGKYVVDLDKGIEMNDVQPNCRVALKNESYRLHKILPTKVDPLVSLM 130
Query: 201 MVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTL 260
MVEKVPDSTY+++GGLD QIKEIKEVIELPVKHPELFD+LGIAQPKGVLLYGPPGTGKTL
Sbjct: 131 MVEKVPDSTYDVIGGLDKQIKEIKEVIELPVKHPELFDSLGIAQPKGVLLYGPPGTGKTL 190
Query: 261 LARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTI 320
LARAVAHHTECTFIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 191 LARAVAHHTECTFIRVSGSELVQKYIGEGSRMVRELFVMA-------------------- 230
Query: 321 LTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGSSRI SGS DSEVQRTMLELLNQLDGFE T+
Sbjct: 231 ---------REHAPSIIFMDEIDSIGSSRIGSGSNSDSEVQRTMLELLNQLDGFEPTQ 279
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/68 (73%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHTECTFIRVSGSELVQK+IGEGSRMVRELFVMAR S MD
Sbjct: 186 TGKTLLARAVAHHTECTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPS----IIFMD 241
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 242 EIDSIGSS 249
>gi|326515000|dbj|BAJ99861.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326520663|dbj|BAJ92695.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 423
Score = 442 bits (1138), Expect = e-122, Method: Compositional matrix adjust.
Identities = 221/299 (73%), Positives = 247/299 (82%), Gaps = 30/299 (10%)
Query: 80 EGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVV 139
EG + YY+ I +LQL + K NL RL+AQRN+LN++VRMLREELQLLQE GSYVGEVV
Sbjct: 34 EGLRQYYLQHIHDLQLQIRTKTHNLNRLEAQRNDLNSRVRMLREELQLLQEPGSYVGEVV 93
Query: 140 KPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSL 199
K M K KVLVKVHPEGK+VVD+DK+IDI +TP+ RVALRN+SY LH ILP+KVDPLV+L
Sbjct: 94 KVMGKSKVLVKVHPEGKYVVDLDKSIDITKITPSTRVALRNDSYMLHLILPSKVDPLVNL 153
Query: 200 MMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKT 259
M VEKVPDSTY+M+GGLD QIKEIKEVIELP+KHPELF++LGIAQPKGVLLYGPPGTGKT
Sbjct: 154 MKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKT 213
Query: 260 LLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLT 319
LLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 214 LLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMA------------------- 254
Query: 320 ILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSG-GDSEVQRTMLELLNQLDGFEAT 377
REHAPSIIFMDEIDSIGS+R+ESGSG GDSEVQRTMLELLNQLDGFEA+
Sbjct: 255 ----------REHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEAS 303
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 43/46 (93%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMAR
Sbjct: 210 TGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAR 255
>gi|363807884|ref|NP_001242190.1| uncharacterized protein LOC100776268 [Glycine max]
gi|255634811|gb|ACU17766.1| unknown [Glycine max]
Length = 395
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 223/302 (73%), Positives = 248/302 (82%), Gaps = 30/302 (9%)
Query: 77 KSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVG 136
K EG + YY I E QL++ +K NL RL+AQRNELN++VRMLREELQLLQE GSYVG
Sbjct: 26 KQGEGLRHYYSHNIHEHQLLLRQKTHNLNRLEAQRNELNSRVRMLREELQLLQEPGSYVG 85
Query: 137 EVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPL 196
EVVK M K KVLVKVHPEGK+VVDIDK+IDI +TP+ RVALRN+SY LH +LP+KVDPL
Sbjct: 86 EVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYVLHLVLPSKVDPL 145
Query: 197 VSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGT 256
V+LM VEKVPDSTY+M+GGLD QIKEIKEVIELP+KHPELF++LGIAQPKGVLLYGPPGT
Sbjct: 146 VNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGT 205
Query: 257 GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWS 316
GKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 206 GKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMA---------------- 249
Query: 317 LLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSG-GDSEVQRTMLELLNQLDGFE 375
REHAPSIIFMDEIDSIGS+R+ESGSG GDSEVQRTMLELLNQLDGFE
Sbjct: 250 -------------REHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFE 296
Query: 376 AT 377
A+
Sbjct: 297 AS 298
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/46 (93%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMAR
Sbjct: 205 TGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAR 250
>gi|242064454|ref|XP_002453516.1| hypothetical protein SORBIDRAFT_04g007170 [Sorghum bicolor]
gi|241933347|gb|EES06492.1| hypothetical protein SORBIDRAFT_04g007170 [Sorghum bicolor]
Length = 422
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 220/299 (73%), Positives = 248/299 (82%), Gaps = 30/299 (10%)
Query: 80 EGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVV 139
EG + YY+ I +LQL + +K NL RL+AQRN+LN++VRMLREELQLLQE GSYVGEVV
Sbjct: 33 EGLRQYYLQHIHDLQLQIRQKTHNLNRLEAQRNDLNSRVRMLREELQLLQEPGSYVGEVV 92
Query: 140 KPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSL 199
K M K KVLVKVHPEGK+VVD+DK+IDI +TP+ RVALRN+SY LH ILP+KVDPLV+L
Sbjct: 93 KVMGKSKVLVKVHPEGKYVVDLDKSIDITKITPSTRVALRNDSYMLHLILPSKVDPLVNL 152
Query: 200 MMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKT 259
M VEKVPDSTY+M+GGLD QIKEIKEVIELP+KHPELF++LGIAQPKGVLLYGPPGTGKT
Sbjct: 153 MKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKT 212
Query: 260 LLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLT 319
LLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 213 LLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMA------------------- 253
Query: 320 ILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSG-GDSEVQRTMLELLNQLDGFEAT 377
REHAPSIIFMDEIDSIGS+R+ESG+G GDSEVQRTMLELLNQLDGFEA+
Sbjct: 254 ----------REHAPSIIFMDEIDSIGSARMESGTGNGDSEVQRTMLELLNQLDGFEAS 302
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 43/46 (93%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMAR
Sbjct: 209 TGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAR 254
>gi|194905344|ref|XP_001981178.1| GG11925 [Drosophila erecta]
gi|190655816|gb|EDV53048.1| GG11925 [Drosophila erecta]
Length = 401
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 236/297 (79%), Positives = 251/297 (84%), Gaps = 30/297 (10%)
Query: 82 FKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKP 141
F Y+ KI ELQ V E+ +NL RLQAQRNELN+KVR+LREELQLLQEQGSY+ EVVKP
Sbjct: 16 FHSYFTQKISELQFTVNERHKNLLRLQAQRNELNSKVRLLREELQLLQEQGSYIAEVVKP 75
Query: 142 MDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMM 201
MDK KVLVKVHPEGK+VVD+DK I+I DVTPN RVALRNESYTLHKILPNKVDPLVSLM+
Sbjct: 76 MDKNKVLVKVHPEGKYVVDVDKAINIKDVTPNSRVALRNESYTLHKILPNKVDPLVSLML 135
Query: 202 VEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLL 261
VEKVPDSTYEMVGGLD QI+EIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLL
Sbjct: 136 VEKVPDSTYEMVGGLDKQIQEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLL 195
Query: 262 ARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTIL 321
ARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA
Sbjct: 196 ARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA--------------------- 234
Query: 322 TNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGS+R+E+G+ GDSEVQRTMLELLNQLDGFEATK
Sbjct: 235 --------REHAPSIIFMDEIDSIGSARMETGT-GDSEVQRTMLELLNQLDGFEATK 282
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/51 (90%), Positives = 47/51 (92%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
+GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR S
Sbjct: 190 TGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPS 240
>gi|299472009|emb|CBN80092.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 398
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 219/298 (73%), Positives = 244/298 (81%), Gaps = 29/298 (9%)
Query: 81 GFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVK 140
G YY KI+E++L+V ++ QNL RL+AQRNELNAKVR+LREEL LQE GSYVGEVVK
Sbjct: 11 GVHSYYQGKIDEMELVVRDRTQNLERLKAQRNELNAKVRLLREELHHLQESGSYVGEVVK 70
Query: 141 PMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLM 200
M KKKVLVKV+PEGK+VVDIDK+ID+N TPN RVALRN+SY LHKILP KVDPLVSLM
Sbjct: 71 AMGKKKVLVKVNPEGKYVVDIDKDIDVNKCTPNTRVALRNDSYVLHKILPTKVDPLVSLM 130
Query: 201 MVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTL 260
VEKVPDSTY+M+GGL+ QI+EIKEVIELP+KHPELF++LG+AQPKGVLLYGPPGTGKTL
Sbjct: 131 KVEKVPDSTYDMIGGLEKQIREIKEVIELPIKHPELFESLGVAQPKGVLLYGPPGTGKTL 190
Query: 261 LARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTI 320
LARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 191 LARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMA-------------------- 230
Query: 321 LTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
RE APSIIFMDEIDSIGSSR+E GGDSEVQRTMLELLNQLDGFE T+
Sbjct: 231 ---------REAAPSIIFMDEIDSIGSSRVEGSEGGDSEVQRTMLELLNQLDGFEPTQ 279
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 49/68 (72%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMAR S MD
Sbjct: 186 TGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREAAPS----IIFMD 241
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 242 EIDSIGSS 249
>gi|158828259|gb|ABW81135.1| unknown [Capsella rubella]
Length = 419
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 223/304 (73%), Positives = 247/304 (81%), Gaps = 30/304 (9%)
Query: 75 AIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSY 134
A K EG K YY I E Q + +K NL RL+AQRNELN++VRMLREELQLLQE GSY
Sbjct: 25 AAKQGEGLKQYYFQHIHEHQRQLRQKTNNLNRLEAQRNELNSRVRMLREELQLLQEPGSY 84
Query: 135 VGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVD 194
VGEVVK M K KVLVKVHPEGK+VVD+DK+IDI +TP+ RVALRN+SY LH +LP+KVD
Sbjct: 85 VGEVVKVMGKNKVLVKVHPEGKYVVDVDKSIDITKLTPSTRVALRNDSYVLHLVLPSKVD 144
Query: 195 PLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPP 254
PLV+LM VEKVPDSTY+M+GGLD QIKEIKEVIELP+KHPELF++LGIAQPKGVLLYGPP
Sbjct: 145 PLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPP 204
Query: 255 GTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLF 314
GTGKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 205 GTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMA-------------- 250
Query: 315 WSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSG-GDSEVQRTMLELLNQLDG 373
REHAPSIIFMDEIDSIGS+R+ESGSG GDSEVQRTMLELLNQLDG
Sbjct: 251 ---------------REHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDG 295
Query: 374 FEAT 377
FEA+
Sbjct: 296 FEAS 299
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/46 (93%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMAR
Sbjct: 206 TGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAR 251
>gi|11993907|gb|AAG42150.1| 26S proteasome RPT6a subunit [Dactylis glomerata]
Length = 452
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 222/304 (73%), Positives = 247/304 (81%), Gaps = 30/304 (9%)
Query: 75 AIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSY 134
A EG + YY+ I +LQL + K NL RL+AQRN+LN+KVR LREELQLLQE GSY
Sbjct: 58 ARAGGEGLRQYYLQHIHDLQLQIRTKTHNLNRLEAQRNDLNSKVRALREELQLLQEPGSY 117
Query: 135 VGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVD 194
VGEVVK M K KVLVKVHPEGK+VVDIDK+IDI +TP+ RVALRN+SY LH ILP+KVD
Sbjct: 118 VGEVVKVMGKSKVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYMLHLILPSKVD 177
Query: 195 PLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPP 254
PLV+LM VEKVPDSTY+M+GGLD QIKEIKEVIELP+KHPELF++LGIAQPKGVLLYGPP
Sbjct: 178 PLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPP 237
Query: 255 GTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLF 314
GTGKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 238 GTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMA-------------- 283
Query: 315 WSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSG-GDSEVQRTMLELLNQLDG 373
REHAPSIIFMDEIDSIGS+R+ESG+G GDSEVQRTMLELLNQLDG
Sbjct: 284 ---------------REHAPSIIFMDEIDSIGSARMESGTGNGDSEVQRTMLELLNQLDG 328
Query: 374 FEAT 377
FEA+
Sbjct: 329 FEAS 332
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 43/46 (93%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMAR
Sbjct: 239 TGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAR 284
>gi|357123964|ref|XP_003563677.1| PREDICTED: 26S protease regulatory subunit 8 homolog A-like
[Brachypodium distachyon]
Length = 422
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 220/299 (73%), Positives = 247/299 (82%), Gaps = 30/299 (10%)
Query: 80 EGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVV 139
EG + YY I +LQL + +K NL RL+AQRN+LN++VRMLREELQLLQE GSYVGEVV
Sbjct: 33 EGLRQYYQQHIHDLQLQIRQKTHNLNRLEAQRNDLNSRVRMLREELQLLQEPGSYVGEVV 92
Query: 140 KPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSL 199
K M K KVLVKVHPEGK+VVD+DK+IDI +TP+ RVALRN+SY LH ILP+KVDPLV+L
Sbjct: 93 KVMGKSKVLVKVHPEGKYVVDLDKSIDITKITPSTRVALRNDSYMLHLILPSKVDPLVNL 152
Query: 200 MMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKT 259
M VEKVPDSTY+M+GGLD QIKEIKEVIELP+KHPELF++LGIAQPKGVLLYGPPGTGKT
Sbjct: 153 MKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKT 212
Query: 260 LLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLT 319
LLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 213 LLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMA------------------- 253
Query: 320 ILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSG-GDSEVQRTMLELLNQLDGFEAT 377
REHAPSIIFMDEIDSIGS+R+ESG+G GDSEVQRTMLELLNQLDGFEA+
Sbjct: 254 ----------REHAPSIIFMDEIDSIGSARMESGTGNGDSEVQRTMLELLNQLDGFEAS 302
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 43/46 (93%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMAR
Sbjct: 209 TGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAR 254
>gi|357139043|ref|XP_003571095.1| PREDICTED: 26S protease regulatory subunit 8 homolog A-like
[Brachypodium distachyon]
Length = 512
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 221/299 (73%), Positives = 248/299 (82%), Gaps = 30/299 (10%)
Query: 80 EGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVV 139
EG + YY+ I +LQL + +K NL RL+AQRN+LN++VRMLREELQLLQE GSYVGEVV
Sbjct: 123 EGLRQYYLQHIHDLQLQIRQKTHNLNRLEAQRNDLNSRVRMLREELQLLQEPGSYVGEVV 182
Query: 140 KPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSL 199
K M K KVLVKVHPEGK+VVDIDK+IDI +TP+ RVALRN+SY LH ILP+KVDPLV+L
Sbjct: 183 KVMGKSKVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYMLHLILPSKVDPLVNL 242
Query: 200 MMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKT 259
M VEKVPDSTY+M+GGLD QIKEIKEVIELP+KHPELF++LGIAQPKGVLLYGPPGTGKT
Sbjct: 243 MKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKT 302
Query: 260 LLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLT 319
LLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 303 LLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMA------------------- 343
Query: 320 ILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSG-GDSEVQRTMLELLNQLDGFEAT 377
REHAPSIIFMDEIDSIGS+R+ESG+G GDSEVQRTMLELLNQLDGFEA+
Sbjct: 344 ----------REHAPSIIFMDEIDSIGSARMESGTGNGDSEVQRTMLELLNQLDGFEAS 392
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 43/46 (93%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMAR
Sbjct: 299 TGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAR 344
>gi|341881375|gb|EGT37310.1| hypothetical protein CAEBREN_16307 [Caenorhabditis brenneri]
Length = 411
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 218/312 (69%), Positives = 248/312 (79%), Gaps = 32/312 (10%)
Query: 67 FFTMDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQ 126
F +D + S + Y+ TK+E+ + +VA K+ N+ RLQAQ+N LN KVRML+EE+
Sbjct: 13 LFALDANS---SEHTLRAYFKTKVEQTEQLVAAKQVNVSRLQAQKNGLNGKVRMLKEEIN 69
Query: 127 LLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLH 186
+L EQ S+VGEVVK MD KKVLVK HP+GK++VD+DK+IDI+ +T RVALR +SYTLH
Sbjct: 70 MLHEQASHVGEVVKAMDAKKVLVKNHPDGKYIVDVDKSIDISKLTAGSRVALRADSYTLH 129
Query: 187 KILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPK 246
KILPN+VDPLVSLMMVEKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELFDALGIAQPK
Sbjct: 130 KILPNRVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPK 189
Query: 247 GVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLA 306
GVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEG+RMVRELFVMA
Sbjct: 190 GVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMA------ 243
Query: 307 FAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLE 366
REH+PSIIFMDEIDSIGS+R++ GGDSEVQRTMLE
Sbjct: 244 -----------------------REHSPSIIFMDEIDSIGSARLDGNRGGDSEVQRTMLE 280
Query: 367 LLNQLDGFEATK 378
LLNQLDGFE+TK
Sbjct: 281 LLNQLDGFESTK 292
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/46 (95%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHTECTFIRVSGSELVQKFIGEG+RMVRELFVMAR
Sbjct: 199 TGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMAR 244
>gi|195505230|ref|XP_002099414.1| GE23375 [Drosophila yakuba]
gi|194185515|gb|EDW99126.1| GE23375 [Drosophila yakuba]
Length = 401
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 236/297 (79%), Positives = 251/297 (84%), Gaps = 30/297 (10%)
Query: 82 FKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKP 141
F Y+ KI ELQ V E+ +NL RLQAQRNELN+KVR+LREELQLLQEQGSY+ EVVKP
Sbjct: 16 FHSYFTQKISELQFTVNERFKNLLRLQAQRNELNSKVRLLREELQLLQEQGSYIAEVVKP 75
Query: 142 MDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMM 201
MDK KVLVKVHPEGK+VVD+DK I+I DVTPN RVALRNESYTLHKILPNKVDPLVSLM+
Sbjct: 76 MDKNKVLVKVHPEGKYVVDVDKAINIKDVTPNSRVALRNESYTLHKILPNKVDPLVSLML 135
Query: 202 VEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLL 261
VEKVPDSTYEMVGGLD QI+EIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLL
Sbjct: 136 VEKVPDSTYEMVGGLDKQIQEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLL 195
Query: 262 ARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTIL 321
ARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA
Sbjct: 196 ARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA--------------------- 234
Query: 322 TNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGS+R+E+G+ GDSEVQRTMLELLNQLDGFEATK
Sbjct: 235 --------REHAPSIIFMDEIDSIGSARMETGT-GDSEVQRTMLELLNQLDGFEATK 282
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/51 (90%), Positives = 47/51 (92%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
+GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR S
Sbjct: 190 TGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPS 240
>gi|326433232|gb|EGD78802.1| peptidase 26S subunit [Salpingoeca sp. ATCC 50818]
Length = 411
Score = 440 bits (1131), Expect = e-121, Method: Compositional matrix adjust.
Identities = 220/308 (71%), Positives = 247/308 (80%), Gaps = 30/308 (9%)
Query: 72 VDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQ 131
DE +G Y +K+ L +++ +K+QNLRRL+A+RNELN +VR L+EEL LL E
Sbjct: 14 ADERDAKDKGATAYLESKVNGLTVVLNDKKQNLRRLEAERNELNGRVRQLKEELTLLHEP 73
Query: 132 GSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPN 191
GSYVGEV K M KKKVLVK HPEGK+VVDI+KNIDI +TPN RVALR++SYTLHK+LPN
Sbjct: 74 GSYVGEVAKVMGKKKVLVKTHPEGKYVVDIEKNIDITKLTPNTRVALRSDSYTLHKVLPN 133
Query: 192 KVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLY 251
KVDPLVSLMM+EKVPDSTY+MVGGLD QIKEIKEVIELPVKHPELF+ALGIAQPKGVLLY
Sbjct: 134 KVDPLVSLMMLEKVPDSTYDMVGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLY 193
Query: 252 GPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHP 311
GPPGTGKTLLARAVAHHTEC+FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 194 GPPGTGKTLLARAVAHHTECSFIRVSGSELVQKYIGEGSRMVRELFVMA----------- 242
Query: 312 LLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESG-SGGDSEVQRTMLELLNQ 370
R+HAPSIIFMDEIDSIGS+R+ G GGDSEVQRTMLELLNQ
Sbjct: 243 ------------------RQHAPSIIFMDEIDSIGSARMSGGKGGGDSEVQRTMLELLNQ 284
Query: 371 LDGFEATK 378
LDGFEAT+
Sbjct: 285 LDGFEATQ 292
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 44/51 (86%), Positives = 47/51 (92%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
+GKTLLARAVAHHTEC+FIRVSGSELVQK+IGEGSRMVRELFVMAR S
Sbjct: 198 TGKTLLARAVAHHTECSFIRVSGSELVQKYIGEGSRMVRELFVMARQHAPS 248
>gi|302838905|ref|XP_002951010.1| 26S proteasome regulatory complex [Volvox carteri f. nagariensis]
gi|300263705|gb|EFJ47904.1| 26S proteasome regulatory complex [Volvox carteri f. nagariensis]
Length = 396
Score = 440 bits (1131), Expect = e-121, Method: Compositional matrix adjust.
Identities = 221/301 (73%), Positives = 245/301 (81%), Gaps = 30/301 (9%)
Query: 78 SSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGE 137
EG K YY KIEEL+L V +K NLRRL+AQRNELN++VRML+EE+QLLQE GSYVGE
Sbjct: 5 GGEGLKGYYRAKIEELELQVKDKTHNLRRLEAQRNELNSQVRMLKEEIQLLQEPGSYVGE 64
Query: 138 VVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLV 197
V+K M K KVLVKVHPEGK+VVDIDK+I I+ + P RVALRN+SYTLH +LP KVDPLV
Sbjct: 65 VIKLMGKNKVLVKVHPEGKYVVDIDKDISIDKLNPGARVALRNDSYTLHLVLPTKVDPLV 124
Query: 198 SLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTG 257
SLM VEKVPDSTY+M+GG D QIKEIKEVIELP+KHPELF++LGIAQPKGVLLYGPPGTG
Sbjct: 125 SLMKVEKVPDSTYDMIGGADQQIKEIKEVIELPLKHPELFESLGIAQPKGVLLYGPPGTG 184
Query: 258 KTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSL 317
KTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 185 KTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMA----------------- 227
Query: 318 LTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIE-SGSGGDSEVQRTMLELLNQLDGFEA 376
REHAPSIIFMDE+DSIGS+R E SG GGDSEVQRTMLELLNQLDGFEA
Sbjct: 228 ------------REHAPSIIFMDEVDSIGSARTENSGGGGDSEVQRTMLELLNQLDGFEA 275
Query: 377 T 377
+
Sbjct: 276 S 276
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/46 (93%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMAR
Sbjct: 183 TGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAR 228
>gi|226492191|ref|NP_001142276.1| uncharacterized protein LOC100274445 [Zea mays]
gi|194707966|gb|ACF88067.1| unknown [Zea mays]
gi|195638490|gb|ACG38713.1| 26S protease regulatory subunit 8 [Zea mays]
gi|413926163|gb|AFW66095.1| 26S protease regulatory subunit 8 [Zea mays]
Length = 422
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 219/297 (73%), Positives = 246/297 (82%), Gaps = 30/297 (10%)
Query: 82 FKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKP 141
+ YY+ I +LQL + +K NL RL+AQRN+LN++VRMLREELQLLQE GSYVGEVVK
Sbjct: 35 LRQYYLQHIHDLQLQIRQKTHNLNRLEAQRNDLNSRVRMLREELQLLQEPGSYVGEVVKV 94
Query: 142 MDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMM 201
M K KVLVKVHPEGK+VVDIDK+IDI +TP+ RVALRN+SY LH ILP+KVDPLV+LM
Sbjct: 95 MGKSKVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYMLHLILPSKVDPLVNLMK 154
Query: 202 VEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLL 261
VEKVPDSTY+M+GGLD QIKEIKEVIELP+KHPELF++LGIAQPKGVLLYGPPGTGKTLL
Sbjct: 155 VEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLL 214
Query: 262 ARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTIL 321
ARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 215 ARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMA--------------------- 253
Query: 322 TNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSG-GDSEVQRTMLELLNQLDGFEAT 377
REHAPSIIFMDEIDSIGS+R+ESG+G GDSEVQRTMLELLNQLDGFEA+
Sbjct: 254 --------REHAPSIIFMDEIDSIGSARMESGTGNGDSEVQRTMLELLNQLDGFEAS 302
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 43/46 (93%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMAR
Sbjct: 209 TGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAR 254
>gi|219886375|gb|ACL53562.1| unknown [Zea mays]
Length = 422
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 219/297 (73%), Positives = 246/297 (82%), Gaps = 30/297 (10%)
Query: 82 FKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKP 141
+ YY+ I +LQL + +K NL RL+AQRN+LN++VRMLREELQLLQE GSYVGEVVK
Sbjct: 35 LRQYYLQHIHDLQLQIRQKTHNLNRLEAQRNDLNSRVRMLREELQLLQEPGSYVGEVVKV 94
Query: 142 MDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMM 201
M K KVLVKVHPEGK+VVDIDK+IDI +TP+ RVALRN+SY LH ILP+KVDPLV+LM
Sbjct: 95 MGKSKVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYMLHLILPSKVDPLVNLMK 154
Query: 202 VEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLL 261
VEKVPDSTY+M+GGLD QIKEIKEVIELP+KHPELF++LGIAQPKGVLLYGPPGTGKTLL
Sbjct: 155 VEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLL 214
Query: 262 ARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTIL 321
ARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 215 ARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMA--------------------- 253
Query: 322 TNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSG-GDSEVQRTMLELLNQLDGFEAT 377
REHAPSIIFMDEIDSIGS+R+ESG+G GDSEVQRTMLELLNQLDGFEA+
Sbjct: 254 --------REHAPSIIFMDEIDSIGSARMESGTGNGDSEVQRTMLELLNQLDGFEAS 302
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 43/46 (93%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMAR
Sbjct: 209 TGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAR 254
>gi|226505738|ref|NP_001140953.1| uncharacterized protein LOC100273032 [Zea mays]
gi|194701920|gb|ACF85044.1| unknown [Zea mays]
gi|194708276|gb|ACF88222.1| unknown [Zea mays]
gi|413936840|gb|AFW71391.1| hypothetical protein ZEAMMB73_600751 [Zea mays]
gi|413936841|gb|AFW71392.1| hypothetical protein ZEAMMB73_600751 [Zea mays]
Length = 422
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 219/297 (73%), Positives = 246/297 (82%), Gaps = 30/297 (10%)
Query: 82 FKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKP 141
+ YY+ I +LQL + +K NL RL+AQRN+LN++VRMLREELQLLQE GSYVGEVVK
Sbjct: 35 LRQYYLQHIHDLQLQIRQKTHNLNRLEAQRNDLNSRVRMLREELQLLQEPGSYVGEVVKV 94
Query: 142 MDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMM 201
M K KVLVKVHPEGK+VVDIDK+IDI +TP+ RVALRN+SY LH ILP+KVDPLV+LM
Sbjct: 95 MGKSKVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYMLHLILPSKVDPLVNLMK 154
Query: 202 VEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLL 261
VEKVPDSTY+M+GGLD QIKEIKEVIELP+KHPELF++LGIAQPKGVLLYGPPGTGKTLL
Sbjct: 155 VEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLL 214
Query: 262 ARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTIL 321
ARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 215 ARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMA--------------------- 253
Query: 322 TNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSG-GDSEVQRTMLELLNQLDGFEAT 377
REHAPSIIFMDEIDSIGS+R+ESG+G GDSEVQRTMLELLNQLDGFEA+
Sbjct: 254 --------REHAPSIIFMDEIDSIGSARMESGTGNGDSEVQRTMLELLNQLDGFEAS 302
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 43/46 (93%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMAR
Sbjct: 209 TGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAR 254
>gi|330798429|ref|XP_003287255.1| 26S proteasome subunit ATPase 5 [Dictyostelium purpureum]
gi|325082715|gb|EGC36188.1| 26S proteasome subunit ATPase 5 [Dictyostelium purpureum]
Length = 398
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 219/301 (72%), Positives = 249/301 (82%), Gaps = 30/301 (9%)
Query: 79 SEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEV 138
++G K YY +KIE+L++ V EK Q+LRRL+AQRNELN +VRML+EELQLL GS+V EV
Sbjct: 8 TKGIKSYYCSKIEDLEIRVNEKAQDLRRLEAQRNELNNRVRMLKEELQLLTNPGSHVAEV 67
Query: 139 VKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVS 198
VK M K KVLVKV+PEGKFVVDID +D++ +TP+ R AL++ESYTLH+ILPNK+DPLVS
Sbjct: 68 VKLMGKNKVLVKVNPEGKFVVDIDPQVDVSKLTPSTRAALKHESYTLHRILPNKIDPLVS 127
Query: 199 LMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGK 258
LM VEK+PDSTY+MVGGLD QIKEIKEVIELP+KHPELF++LGIAQPKGVLLYGPPGTGK
Sbjct: 128 LMKVEKIPDSTYDMVGGLDKQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGK 187
Query: 259 TLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLL 318
TLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELF+MA
Sbjct: 188 TLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFIMA------------------ 229
Query: 319 TILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGS-GGDSEVQRTMLELLNQLDGFEAT 377
REHAPSIIFMDEIDSIGSSR ESGS GGDSEVQRTMLELLNQLDGFE+T
Sbjct: 230 -----------REHAPSIIFMDEIDSIGSSRTESGSGGGDSEVQRTMLELLNQLDGFEST 278
Query: 378 K 378
K
Sbjct: 279 K 279
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELF+MAR S MD
Sbjct: 185 TGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFIMAREHAPS----IIFMD 240
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 241 EIDSIGSS 248
>gi|115444937|ref|NP_001046248.1| Os02g0205300 [Oryza sativa Japonica Group]
gi|11094194|dbj|BAB17626.1| 26S proteasome regulatory particle triple-A ATPase subunit6 [Oryza
sativa Japonica Group]
gi|11991116|dbj|BAB19880.1| 26S proteasome ATPase subunit Rpt6 [Oryza sativa]
gi|46390529|dbj|BAD16017.1| 26S proteasome regulatory particle triple-A ATPase subunit6 [Oryza
sativa Japonica Group]
gi|51536269|dbj|BAD38437.1| 26S proteasome regulatory particle triple-A ATPase subunit6 [Oryza
sativa Japonica Group]
gi|113535779|dbj|BAF08162.1| Os02g0205300 [Oryza sativa Japonica Group]
gi|125538544|gb|EAY84939.1| hypothetical protein OsI_06305 [Oryza sativa Indica Group]
gi|125581230|gb|EAZ22161.1| hypothetical protein OsJ_05824 [Oryza sativa Japonica Group]
gi|215692677|dbj|BAG88097.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215717117|dbj|BAG95480.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215741151|dbj|BAG97646.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 424
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 219/297 (73%), Positives = 246/297 (82%), Gaps = 30/297 (10%)
Query: 82 FKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKP 141
+ YY+ I +LQL + +K NL RL+AQRN+LN++VRMLREELQLLQE GSYVGEVVK
Sbjct: 37 LRQYYLQHIHDLQLQIRQKTHNLNRLEAQRNDLNSRVRMLREELQLLQEPGSYVGEVVKV 96
Query: 142 MDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMM 201
M K KVLVKVHPEGK+VVDIDK+IDI +TP+ RVALRN+SY LH ILP+KVDPLV+LM
Sbjct: 97 MGKSKVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYMLHLILPSKVDPLVNLMK 156
Query: 202 VEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLL 261
VEKVPDSTY+M+GGLD QIKEIKEVIELP+KHPELF++LGIAQPKGVLLYGPPGTGKTLL
Sbjct: 157 VEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLL 216
Query: 262 ARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTIL 321
ARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 217 ARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMA--------------------- 255
Query: 322 TNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSG-GDSEVQRTMLELLNQLDGFEAT 377
REHAPSIIFMDEIDSIGS+R+ESG+G GDSEVQRTMLELLNQLDGFEA+
Sbjct: 256 --------REHAPSIIFMDEIDSIGSARMESGTGNGDSEVQRTMLELLNQLDGFEAS 304
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 43/46 (93%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMAR
Sbjct: 211 TGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAR 256
>gi|413926162|gb|AFW66094.1| hypothetical protein ZEAMMB73_419750 [Zea mays]
Length = 477
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 219/297 (73%), Positives = 246/297 (82%), Gaps = 30/297 (10%)
Query: 82 FKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKP 141
+ YY+ I +LQL + +K NL RL+AQRN+LN++VRMLREELQLLQE GSYVGEVVK
Sbjct: 35 LRQYYLQHIHDLQLQIRQKTHNLNRLEAQRNDLNSRVRMLREELQLLQEPGSYVGEVVKV 94
Query: 142 MDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMM 201
M K KVLVKVHPEGK+VVDIDK+IDI +TP+ RVALRN+SY LH ILP+KVDPLV+LM
Sbjct: 95 MGKSKVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYMLHLILPSKVDPLVNLMK 154
Query: 202 VEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLL 261
VEKVPDSTY+M+GGLD QIKEIKEVIELP+KHPELF++LGIAQPKGVLLYGPPGTGKTLL
Sbjct: 155 VEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLL 214
Query: 262 ARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTIL 321
ARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 215 ARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMA--------------------- 253
Query: 322 TNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSG-GDSEVQRTMLELLNQLDGFEAT 377
REHAPSIIFMDEIDSIGS+R+ESG+G GDSEVQRTMLELLNQLDGFEA+
Sbjct: 254 --------REHAPSIIFMDEIDSIGSARMESGTGNGDSEVQRTMLELLNQLDGFEAS 302
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/46 (93%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMAR
Sbjct: 209 TGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAR 254
>gi|17385640|dbj|BAA87070.2| TAT-binding protein homolog [Matricaria chamomilla]
Length = 414
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 219/302 (72%), Positives = 247/302 (81%), Gaps = 30/302 (9%)
Query: 77 KSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVG 136
K+ EG + YY+ I + QL V +K NL RL+AQRNELN++V ML+EELQLLQE GSYVG
Sbjct: 22 KTGEGLRQYYLQHIHDAQLQVRQKTHNLNRLEAQRNELNSRVGMLKEELQLLQEPGSYVG 81
Query: 137 EVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPL 196
EVVK M K KVLVKVHPEGK+VVDIDK+IDI +TP+ RVALRN+SY LH +LP+KVDPL
Sbjct: 82 EVVKVMGKSKVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYVLHLVLPSKVDPL 141
Query: 197 VSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGT 256
V+LM VEKVPDSTY+M+GGLD QIKEIKEVIELP+KHPELF++LGIAQPKGVLLYGPPGT
Sbjct: 142 VNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGT 201
Query: 257 GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWS 316
GKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 202 GKTLLARAVAHHTDCAFIRVSGSELVQKYIGEGSRMVRELFVMA---------------- 245
Query: 317 LLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSG-GDSEVQRTMLELLNQLDGFE 375
REHAPSIIFMDEIDSIGS+R+ESGSG GDSEVQRTMLELLNQLDGFE
Sbjct: 246 -------------REHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFE 292
Query: 376 AT 377
++
Sbjct: 293 SS 294
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/46 (91%), Positives = 45/46 (97%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMAR
Sbjct: 201 TGKTLLARAVAHHTDCAFIRVSGSELVQKYIGEGSRMVRELFVMAR 246
>gi|197312891|gb|ACH63226.1| putative 26S proteasome AAA-ATPase subunit RPT6a [Rheum australe]
Length = 395
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 219/302 (72%), Positives = 250/302 (82%), Gaps = 30/302 (9%)
Query: 77 KSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVG 136
K EG + YY+ +I ELQL + +K NL+RL+AQRN+LN++VR L+EELQLLQE GSYVG
Sbjct: 23 KPGEGLRQYYLQRIHELQLQLRQKVNNLQRLEAQRNDLNSRVRALKEELQLLQEPGSYVG 82
Query: 137 EVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPL 196
EVVK M K KVLVKVHPEGK+VVDIDK+IDI +TP+ RVAL+N+SY LH +LP+KVDPL
Sbjct: 83 EVVKVMGKSKVLVKVHPEGKYVVDIDKSIDITKITPSTRVALKNDSYVLHLVLPSKVDPL 142
Query: 197 VSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGT 256
V+LM VEKVPDSTY+M+GGLD QIKEIKEVIELP+KHPELF++LGIAQPKGVLLYGPPGT
Sbjct: 143 VNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGT 202
Query: 257 GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWS 316
GKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 203 GKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMA---------------- 246
Query: 317 LLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSG-GDSEVQRTMLELLNQLDGFE 375
REHAPSIIFMDEIDSIGS+R+ESGSG GDSEV+RTMLELLNQLDGFE
Sbjct: 247 -------------REHAPSIIFMDEIDSIGSARMESGSGNGDSEVRRTMLELLNQLDGFE 293
Query: 376 AT 377
A+
Sbjct: 294 AS 295
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/46 (93%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMAR
Sbjct: 202 TGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAR 247
>gi|341881398|gb|EGT37333.1| hypothetical protein CAEBREN_12847 [Caenorhabditis brenneri]
Length = 411
Score = 436 bits (1122), Expect = e-120, Method: Compositional matrix adjust.
Identities = 217/312 (69%), Positives = 247/312 (79%), Gaps = 32/312 (10%)
Query: 67 FFTMDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQ 126
F +D + S + Y+ TK+E+ + +VA K+ N+ RLQAQ+N LN KVRML+EE+
Sbjct: 13 LFALDANS---SEHTLRAYFKTKVEQTEQLVAAKQVNVCRLQAQKNGLNGKVRMLKEEIN 69
Query: 127 LLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLH 186
+L EQ S+VGEVVK MD KKVLVK HP+GK++VD+DK+IDI+ + RVALR +SYTLH
Sbjct: 70 MLHEQASHVGEVVKAMDAKKVLVKNHPDGKYIVDVDKSIDISKLAAGSRVALRADSYTLH 129
Query: 187 KILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPK 246
KILPN+VDPLVSLMMVEKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELFDALGIAQPK
Sbjct: 130 KILPNRVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPK 189
Query: 247 GVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLA 306
GVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEG+RMVRELFVMA
Sbjct: 190 GVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMA------ 243
Query: 307 FAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLE 366
REH+PSIIFMDEIDSIGS+R++ GGDSEVQRTMLE
Sbjct: 244 -----------------------REHSPSIIFMDEIDSIGSARLDGNRGGDSEVQRTMLE 280
Query: 367 LLNQLDGFEATK 378
LLNQLDGFE+TK
Sbjct: 281 LLNQLDGFESTK 292
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/46 (95%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHTECTFIRVSGSELVQKFIGEG+RMVRELFVMAR
Sbjct: 199 TGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMAR 244
>gi|308505464|ref|XP_003114915.1| hypothetical protein CRE_28272 [Caenorhabditis remanei]
gi|308259097|gb|EFP03050.1| hypothetical protein CRE_28272 [Caenorhabditis remanei]
Length = 409
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 215/294 (73%), Positives = 240/294 (81%), Gaps = 29/294 (9%)
Query: 85 YYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDK 144
Y+ TK++E + V +KEQN+RRLQAQ+NELN KV +L++E+Q L EQ S+VGEV K MDK
Sbjct: 26 YWATKVDEAEQAVTKKEQNVRRLQAQKNELNGKVALLKDEIQRLHEQASHVGEVCKAMDK 85
Query: 145 KKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEK 204
KKVLVK +P+GK++VD+DK+IDIN + RVA++ ESY +HKILPNKVDPLVSLMMVEK
Sbjct: 86 KKVLVKNNPDGKYIVDVDKDIDINQLVAGTRVAMKAESYMIHKILPNKVDPLVSLMMVEK 145
Query: 205 VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 264
VPDSTYEMVGGLD QIKEIKEVIELPVKHPELFDALGI QPKGVLLYGPPGTGKTLLARA
Sbjct: 146 VPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIEQPKGVLLYGPPGTGKTLLARA 205
Query: 265 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNT 324
VAHHTECTFIRVSGSELVQKFIGEG+RMVRELFVMA
Sbjct: 206 VAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMA------------------------ 241
Query: 325 IVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REH+PSIIFMDEIDSIGSSR+E GGDSEVQRTMLELLNQLDGFEATK
Sbjct: 242 -----REHSPSIIFMDEIDSIGSSRLEGSRGGDSEVQRTMLELLNQLDGFEATK 290
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/68 (73%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHTECTFIRVSGSELVQKFIGEG+RMVRELFVMAR S MD
Sbjct: 197 TGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMAREHSPS----IIFMD 252
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 253 EIDSIGSS 260
>gi|452821525|gb|EME28554.1| AAA-type ATPase [Galdieria sulphuraria]
Length = 407
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 218/293 (74%), Positives = 244/293 (83%), Gaps = 31/293 (10%)
Query: 85 YYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDK 144
YY K++EL+ + EKE NLRRL+AQRN+LN+KV+ LREEL +LQE GSYVGEVVK M +
Sbjct: 22 YYERKLDELEGFIREKEDNLRRLEAQRNDLNSKVKNLREELHILQEPGSYVGEVVKVMGR 81
Query: 145 KKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEK 204
KVLVKV PEGK+VVD+DK IDIN +TPN RVALRN+SY+LHKILP+KVDPLVSLM VEK
Sbjct: 82 SKVLVKVQPEGKYVVDLDKEIDINSITPNLRVALRNDSYSLHKILPSKVDPLVSLMRVEK 141
Query: 205 VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 264
VPDSTY+M+GGLD QIKEIKEVIELP+KHPELF++LGIAQPKGVLLYGPPGTGKTLLARA
Sbjct: 142 VPDSTYDMIGGLDKQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARA 201
Query: 265 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNT 324
VAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 202 VAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMA------------------------ 237
Query: 325 IVCNFREHAPSIIFMDEIDSIGSSRIESGS--GGDSEVQRTMLELLNQLDGFE 375
REHAPSIIFMDEIDSIGS+RI+SG+ GGDSEVQRTMLELLNQLDGFE
Sbjct: 238 -----REHAPSIIFMDEIDSIGSTRIDSGNSGGGDSEVQRTMLELLNQLDGFE 285
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/46 (93%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMAR
Sbjct: 193 TGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAR 238
>gi|302774182|ref|XP_002970508.1| hypothetical protein SELMODRAFT_441130 [Selaginella moellendorffii]
gi|302793650|ref|XP_002978590.1| hypothetical protein SELMODRAFT_177014 [Selaginella moellendorffii]
gi|300153939|gb|EFJ20576.1| hypothetical protein SELMODRAFT_177014 [Selaginella moellendorffii]
gi|300162024|gb|EFJ28638.1| hypothetical protein SELMODRAFT_441130 [Selaginella moellendorffii]
Length = 395
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 219/302 (72%), Positives = 246/302 (81%), Gaps = 30/302 (9%)
Query: 77 KSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVG 136
+ EGF YY ++I + + K NL RL+AQRN+LN+KVRMLREELQLLQE GSYVG
Sbjct: 3 RCGEGFHDYYTSRIHDASQQLRIKGNNLARLEAQRNDLNSKVRMLREELQLLQEPGSYVG 62
Query: 137 EVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPL 196
EVVK M K KVLVKVHPEGK+VVD+DK+ID++ +TP RVALRN+SY LH ILP+KVDPL
Sbjct: 63 EVVKVMGKSKVLVKVHPEGKYVVDVDKSIDMSKITPTTRVALRNDSYVLHLILPSKVDPL 122
Query: 197 VSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGT 256
V+LM VEKVPDSTY+M+GGLD QIKEIKEVIELP+KHPELF++LGIAQPKGVLLYGPPGT
Sbjct: 123 VNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGT 182
Query: 257 GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWS 316
GKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 183 GKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMA---------------- 226
Query: 317 LLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSG-GDSEVQRTMLELLNQLDGFE 375
REHAPSIIFMDEIDSIGSSR+ESG+G GDSEVQRTMLELLNQLDGFE
Sbjct: 227 -------------REHAPSIIFMDEIDSIGSSRMESGNGNGDSEVQRTMLELLNQLDGFE 273
Query: 376 AT 377
A+
Sbjct: 274 AS 275
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 49/68 (72%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMAR S MD
Sbjct: 182 TGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPS----IIFMD 237
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 238 EIDSIGSS 245
>gi|6599051|emb|CAB63651.1| 26S proteasome subunit 8 [Fagus sylvatica]
Length = 418
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 223/304 (73%), Positives = 244/304 (80%), Gaps = 31/304 (10%)
Query: 77 KSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVG 136
K EG K YY+ I E QL V +K NL RL+AQRNE N++VRMLREELQLLQE GSYVG
Sbjct: 23 KQGEGLKQYYLQHIHEHQLQVRQKTHNLNRLEAQRNEFNSRVRMLREELQLLQEPGSYVG 82
Query: 137 EVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPL 196
EVVK M K KVLVKVH EGK+VVDIDKNIDI +TP+ RVALRN+SY LH ILP+KVDPL
Sbjct: 83 EVVKVMGKNKVLVKVHSEGKYVVDIDKNIDITKITPSTRVALRNDSYVLHLILPSKVDPL 142
Query: 197 VSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELF-DALGIAQPKGVLLYGPPG 255
V+LM VEKVPDSTY+M+GGLD QIKEIKEVIELP+KHPELF ++LGIAQPKGVLLYGPPG
Sbjct: 143 VNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFLESLGIAQPKGVLLYGPPG 202
Query: 256 TGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFW 315
TGKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 203 TGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMA--------------- 247
Query: 316 SLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSG-GDSEVQRTMLELLNQLDGF 374
REHAPSIIFMDEIDSIGS+R+ESGSG GDSEVQ MLELLNQLDGF
Sbjct: 248 --------------REHAPSIIFMDEIDSIGSARMESGSGNGDSEVQDHMLELLNQLDGF 293
Query: 375 EATK 378
E+ K
Sbjct: 294 ESIK 297
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/46 (93%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMAR
Sbjct: 203 TGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAR 248
>gi|448085163|ref|XP_004195789.1| Piso0_005206 [Millerozyma farinosa CBS 7064]
gi|359377211|emb|CCE85594.1| Piso0_005206 [Millerozyma farinosa CBS 7064]
Length = 401
Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust.
Identities = 213/298 (71%), Positives = 245/298 (82%), Gaps = 29/298 (9%)
Query: 81 GFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVK 140
G KPY+ +I++ +L + +NLRRL+AQRN+LN KVR L++EL+LLQE GSYVGEVVK
Sbjct: 14 GIKPYFEQQIQDTELKIQGTTENLRRLEAQRNKLNNKVRQLKDELRLLQEPGSYVGEVVK 73
Query: 141 PMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLM 200
M KKVLVK+HPEGK++V+I K++DI +TP+CRV L+ +SY LHKILPNKVDPLVSLM
Sbjct: 74 VMGLKKVLVKIHPEGKYIVNISKDVDIKKLTPSCRVCLKADSYDLHKILPNKVDPLVSLM 133
Query: 201 MVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTL 260
M+EKVPDSTY+MVGGLDNQIKEIKEVIELPVKHPELF++LGIAQPKGV+LYGPPGTGKTL
Sbjct: 134 MLEKVPDSTYDMVGGLDNQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTL 193
Query: 261 LARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTI 320
LAR+VAHHTEC FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 194 LARSVAHHTECKFIRVSGSELVQKYIGEGSRMVRELFVMA-------------------- 233
Query: 321 LTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGSSR+E SGGDSEVQRTMLELLNQLDGFE++K
Sbjct: 234 ---------REHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFESSK 282
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 53/68 (77%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLAR+VAHHTEC FIRVSGSELVQK+IGEGSRMVRELFVMAR S MD
Sbjct: 189 TGKTLLARSVAHHTECKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPS----IIFMD 244
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 245 EIDSIGSS 252
>gi|448080676|ref|XP_004194697.1| Piso0_005206 [Millerozyma farinosa CBS 7064]
gi|359376119|emb|CCE86701.1| Piso0_005206 [Millerozyma farinosa CBS 7064]
Length = 401
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 213/298 (71%), Positives = 244/298 (81%), Gaps = 29/298 (9%)
Query: 81 GFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVK 140
G KPY+ +I++ +L + +NLRRL+AQRN+LN KVR L++EL+LLQE GSYVGEVVK
Sbjct: 14 GIKPYFEQQIQDTELKIQGTTENLRRLEAQRNKLNNKVRQLKDELRLLQEPGSYVGEVVK 73
Query: 141 PMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLM 200
M KKVLVK+HPEGK++V+I K++DI +TP+CRV L+ +SY LHKILPNKVDPLVSLM
Sbjct: 74 VMGLKKVLVKIHPEGKYIVNISKDVDIKKLTPSCRVCLKADSYDLHKILPNKVDPLVSLM 133
Query: 201 MVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTL 260
MVEKVPDSTY+MVGGLD QIKEIKEVIELPVKHPELF++LGIAQPKGV+LYGPPGTGKTL
Sbjct: 134 MVEKVPDSTYDMVGGLDKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTL 193
Query: 261 LARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTI 320
LAR+VAHHTEC FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 194 LARSVAHHTECKFIRVSGSELVQKYIGEGSRMVRELFVMA-------------------- 233
Query: 321 LTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGSSR+E SGGDSEVQRTMLELLNQLDGFE++K
Sbjct: 234 ---------REHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFESSK 282
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 53/68 (77%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLAR+VAHHTEC FIRVSGSELVQK+IGEGSRMVRELFVMAR S MD
Sbjct: 189 TGKTLLARSVAHHTECKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPS----IIFMD 244
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 245 EIDSIGSS 252
>gi|126135282|ref|XP_001384165.1| protease regulatory subunit 8 homolog (SUG1 protein) (CIM3 protein)
(TAT-binding protein TBY1) [Scheffersomyces stipitis CBS
6054]
gi|126091363|gb|ABN66136.1| protease regulatory subunit 8 homolog (SUG1 protein) (CIM3 protein)
(TAT-binding protein TBY1) [Scheffersomyces stipitis CBS
6054]
Length = 402
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 212/298 (71%), Positives = 245/298 (82%), Gaps = 29/298 (9%)
Query: 81 GFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVK 140
G +PY+ +I++ ++ + + QNLRRL+AQRN+LN KVR L++EL+LLQE GSYVGEVVK
Sbjct: 15 GIRPYFEQQIQDTEIKIQQTTQNLRRLEAQRNKLNNKVRQLKDELRLLQEPGSYVGEVVK 74
Query: 141 PMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLM 200
M KKVLVK+HPEGK++V++ K+IDI +TP+ RV L+++SY LHKILPNKVDPLVSLM
Sbjct: 75 VMGLKKVLVKIHPEGKYIVNVTKDIDIKKLTPSIRVCLKSDSYDLHKILPNKVDPLVSLM 134
Query: 201 MVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTL 260
MVEKVPDSTY+MVGGLD QIKEIKEVIELPVKHPELF++LGIAQPKGV+LYGPPGTGKTL
Sbjct: 135 MVEKVPDSTYDMVGGLDKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTL 194
Query: 261 LARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTI 320
LARAVAHHTEC FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 195 LARAVAHHTECKFIRVSGSELVQKYIGEGSRMVRELFVMA-------------------- 234
Query: 321 LTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGSSR+E SGGDSEVQRTMLELLNQLDGFE++K
Sbjct: 235 ---------REHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFESSK 283
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/68 (72%), Positives = 53/68 (77%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHTEC FIRVSGSELVQK+IGEGSRMVRELFVMAR S MD
Sbjct: 190 TGKTLLARAVAHHTECKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPS----IIFMD 245
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 246 EIDSIGSS 253
>gi|405122785|gb|AFR97551.1| endopeptidase [Cryptococcus neoformans var. grubii H99]
Length = 407
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 223/313 (71%), Positives = 245/313 (78%), Gaps = 32/313 (10%)
Query: 69 TMDVDEAIKSSEG--FKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQ 126
T + +A S+ G K YY KIE +L + K QNLRRL+AQRN LNA+VR+LREELQ
Sbjct: 5 TQKMPKAPTSTPGGSIKTYYQNKIEAAELDITRKTQNLRRLEAQRNALNARVRLLREELQ 64
Query: 127 LLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLH 186
+LQE GSYVGEV+K M KKKVLVKV PEGK+VVD +I I+ +TPN RV+LR +SY LH
Sbjct: 65 VLQEPGSYVGEVIKVMGKKKVLVKVQPEGKYVVDFSPDIPISALTPNIRVSLRADSYLLH 124
Query: 187 KILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPK 246
ILPNK+DPLVSLMMVEKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELF++LGIAQPK
Sbjct: 125 SILPNKIDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFESLGIAQPK 184
Query: 247 GVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLA 306
GVLLYGPPGTGKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 185 GVLLYGPPGTGKTLLARAVAHHTDCRFIRVSGSELVQKYIGEGSRMVRELFVMA------ 238
Query: 307 FAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGS-GGDSEVQRTML 365
REHAPSIIFMDEIDSIGSSR E G GDSEVQRTM+
Sbjct: 239 -----------------------REHAPSIIFMDEIDSIGSSRGEGGGKSGDSEVQRTMM 275
Query: 366 ELLNQLDGFEATK 378
ELLNQLDGFEATK
Sbjct: 276 ELLNQLDGFEATK 288
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/70 (70%), Positives = 54/70 (77%), Gaps = 4/70 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMAR S MD
Sbjct: 194 TGKTLLARAVAHHTDCRFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPS----IIFMD 249
Query: 72 VDEAIKSSEG 81
++I SS G
Sbjct: 250 EIDSIGSSRG 259
>gi|25144278|ref|NP_741099.1| Protein F56F11.4, isoform a [Caenorhabditis elegans]
gi|351063790|emb|CCD72012.1| Protein F56F11.4, isoform a [Caenorhabditis elegans]
Length = 411
Score = 429 bits (1104), Expect = e-118, Method: Compositional matrix adjust.
Identities = 213/305 (69%), Positives = 242/305 (79%), Gaps = 29/305 (9%)
Query: 74 EAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGS 133
+A + +PY+ TK+E+ + VAEK N+RRL AQ+ ELN KVR+L+EE+ L EQGS
Sbjct: 17 DANSDEQTLRPYFKTKVEQAEQTVAEKSINVRRLMAQQKELNGKVRLLKEEISHLHEQGS 76
Query: 134 YVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKV 193
+VGEV K MDKKKVLVK HP+GK++VD+ ++DI+ + RVALR ++Y +H++LP+KV
Sbjct: 77 HVGEVCKAMDKKKVLVKNHPDGKYIVDVAASVDISTLAAGTRVALRADNYAIHEVLPSKV 136
Query: 194 DPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGP 253
DPLVSLMMVEKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGP
Sbjct: 137 DPLVSLMMVEKVPDSTYEMVGGLDTQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGP 196
Query: 254 PGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLL 313
PGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEG+RMVRELFVMA
Sbjct: 197 PGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMA------------- 243
Query: 314 FWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDG 373
REHAPSIIFMDEIDSIGSSR+E GGDSEVQRTMLELLNQLDG
Sbjct: 244 ----------------REHAPSIIFMDEIDSIGSSRVEGSRGGDSEVQRTMLELLNQLDG 287
Query: 374 FEATK 378
FEATK
Sbjct: 288 FEATK 292
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/68 (73%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHTECTFIRVSGSELVQKFIGEG+RMVRELFVMAR S MD
Sbjct: 199 TGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPS----IIFMD 254
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 255 EIDSIGSS 262
>gi|25144281|ref|NP_741098.1| Protein F56F11.4, isoform b [Caenorhabditis elegans]
gi|351063791|emb|CCD72013.1| Protein F56F11.4, isoform b [Caenorhabditis elegans]
Length = 432
Score = 429 bits (1104), Expect = e-118, Method: Compositional matrix adjust.
Identities = 213/305 (69%), Positives = 242/305 (79%), Gaps = 29/305 (9%)
Query: 74 EAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGS 133
+A + +PY+ TK+E+ + VAEK N+RRL AQ+ ELN KVR+L+EE+ L EQGS
Sbjct: 38 DANSDEQTLRPYFKTKVEQAEQTVAEKSINVRRLMAQQKELNGKVRLLKEEISHLHEQGS 97
Query: 134 YVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKV 193
+VGEV K MDKKKVLVK HP+GK++VD+ ++DI+ + RVALR ++Y +H++LP+KV
Sbjct: 98 HVGEVCKAMDKKKVLVKNHPDGKYIVDVAASVDISTLAAGTRVALRADNYAIHEVLPSKV 157
Query: 194 DPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGP 253
DPLVSLMMVEKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGP
Sbjct: 158 DPLVSLMMVEKVPDSTYEMVGGLDTQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGP 217
Query: 254 PGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLL 313
PGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEG+RMVRELFVMA
Sbjct: 218 PGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMA------------- 264
Query: 314 FWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDG 373
REHAPSIIFMDEIDSIGSSR+E GGDSEVQRTMLELLNQLDG
Sbjct: 265 ----------------REHAPSIIFMDEIDSIGSSRVEGSRGGDSEVQRTMLELLNQLDG 308
Query: 374 FEATK 378
FEATK
Sbjct: 309 FEATK 313
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/68 (73%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHTECTFIRVSGSELVQKFIGEG+RMVRELFVMAR S MD
Sbjct: 220 TGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPS----IIFMD 275
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 276 EIDSIGSS 283
>gi|68483105|ref|XP_714488.1| likely 26S proteasome regulatory particle ATPase Rpt6p [Candida
albicans SC5314]
gi|46436058|gb|EAK95427.1| likely 26S proteasome regulatory particle ATPase Rpt6p [Candida
albicans SC5314]
Length = 401
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 212/311 (68%), Positives = 249/311 (80%), Gaps = 29/311 (9%)
Query: 68 FTMDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQL 127
T +D++ G +PY+ +I++ ++ + + QNLRRL+AQRN+LN KVR L++EL+L
Sbjct: 1 MTTSIDKSYVHEGGIRPYFEQQIQDTEIRIQQTTQNLRRLEAQRNKLNNKVRQLKDELKL 60
Query: 128 LQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHK 187
LQE GSYVGEVVK M KKVLVK+HPEGKF+V++ K+ID+ +TP+ RV L+ +S+ L+K
Sbjct: 61 LQEPGSYVGEVVKVMGLKKVLVKIHPEGKFIVNVTKDIDVKKLTPSIRVCLKADSHDLYK 120
Query: 188 ILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKG 247
ILPNKVDPLVSLMMVEKVPDSTY+MVGGLD QIKEIKEVIELPVKHPELF++LGIAQPKG
Sbjct: 121 ILPNKVDPLVSLMMVEKVPDSTYDMVGGLDKQIKEIKEVIELPVKHPELFESLGIAQPKG 180
Query: 248 VLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAF 307
V+LYGPPGTGKTLLARAVAHHTEC FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 181 VILYGPPGTGKTLLARAVAHHTECKFIRVSGSELVQKYIGEGSRMVRELFVMA------- 233
Query: 308 AHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLEL 367
REHAPSIIFMDEIDSIGSSR+E SGGDSEVQRTMLEL
Sbjct: 234 ----------------------REHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLEL 271
Query: 368 LNQLDGFEATK 378
LNQLDGFE++K
Sbjct: 272 LNQLDGFESSK 282
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/68 (72%), Positives = 53/68 (77%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHTEC FIRVSGSELVQK+IGEGSRMVRELFVMAR S MD
Sbjct: 189 TGKTLLARAVAHHTECKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPS----IIFMD 244
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 245 EIDSIGSS 252
>gi|58260138|ref|XP_567479.1| endopeptidase [Cryptococcus neoformans var. neoformans JEC21]
gi|134116600|ref|XP_772972.1| hypothetical protein CNBJ2480 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255592|gb|EAL18325.1| hypothetical protein CNBJ2480 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57229529|gb|AAW45962.1| endopeptidase, putative [Cryptococcus neoformans var. neoformans
JEC21]
Length = 407
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 222/313 (70%), Positives = 245/313 (78%), Gaps = 32/313 (10%)
Query: 69 TMDVDEAIKSSEG--FKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQ 126
T + +A S+ G K YY KIE +L + K QNLRRL+AQRN LNA+VR+LREELQ
Sbjct: 5 TQKMPKAPTSAPGGSIKTYYQNKIEAAELDITRKTQNLRRLEAQRNALNARVRLLREELQ 64
Query: 127 LLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLH 186
+LQE GSYVGEV+K M KKKVLVKV PEGK+VVD +I I+ +TPN RV+LR +SY LH
Sbjct: 65 VLQEPGSYVGEVIKVMGKKKVLVKVQPEGKYVVDFSPDIPISALTPNIRVSLRADSYLLH 124
Query: 187 KILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPK 246
ILPNK+DPLVSLMMVEKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELF++LGIAQPK
Sbjct: 125 SILPNKIDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFESLGIAQPK 184
Query: 247 GVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLA 306
GVLLYGPPGTGKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 185 GVLLYGPPGTGKTLLARAVAHHTDCRFIRVSGSELVQKYIGEGSRMVRELFVMA------ 238
Query: 307 FAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIE-SGSGGDSEVQRTML 365
REHAPSIIFMDEIDSIG SR E +G GDSEVQRTM+
Sbjct: 239 -----------------------REHAPSIIFMDEIDSIGGSRGEGAGKSGDSEVQRTMM 275
Query: 366 ELLNQLDGFEATK 378
ELLNQLDGFEATK
Sbjct: 276 ELLNQLDGFEATK 288
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/70 (68%), Positives = 53/70 (75%), Gaps = 4/70 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMAR S MD
Sbjct: 194 TGKTLLARAVAHHTDCRFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPS----IIFMD 249
Query: 72 VDEAIKSSEG 81
++I S G
Sbjct: 250 EIDSIGGSRG 259
>gi|344229180|gb|EGV61066.1| 26S proteasome subunit P45 [Candida tenuis ATCC 10573]
gi|344229181|gb|EGV61067.1| hypothetical protein CANTEDRAFT_116302 [Candida tenuis ATCC 10573]
Length = 401
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 211/311 (67%), Positives = 247/311 (79%), Gaps = 29/311 (9%)
Query: 68 FTMDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQL 127
T+ +D + G KPY+ +I++ ++ V +NLRRL+AQRN+LN KVR L++EL+L
Sbjct: 1 MTVSIDNSYVHEGGIKPYFEQQIQDTEISVQNTTENLRRLEAQRNKLNNKVRQLKDELRL 60
Query: 128 LQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHK 187
LQE GSYVGEV+K M KVLVK+HPEGK++V++ K+IDI +TP+ RV L+ +SY LHK
Sbjct: 61 LQEPGSYVGEVIKVMGLNKVLVKIHPEGKYIVNVSKDIDIKKLTPSLRVCLKADSYDLHK 120
Query: 188 ILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKG 247
ILPNKVDPLVSLMMVEKVPDSTY+MVGGLD QIKEIKEVIELPVKHPELF++LGIAQPKG
Sbjct: 121 ILPNKVDPLVSLMMVEKVPDSTYDMVGGLDKQIKEIKEVIELPVKHPELFESLGIAQPKG 180
Query: 248 VLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAF 307
V+LYGPPGTGKTLLAR+VAHHTEC FIRVSGSELVQK+IGEGSRMVRELF+MA
Sbjct: 181 VILYGPPGTGKTLLARSVAHHTECKFIRVSGSELVQKYIGEGSRMVRELFIMA------- 233
Query: 308 AHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLEL 367
REHAPSIIFMDEIDSIGSSR+E SGGDSEVQRTMLEL
Sbjct: 234 ----------------------REHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLEL 271
Query: 368 LNQLDGFEATK 378
LNQLDGFE++K
Sbjct: 272 LNQLDGFESSK 282
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 53/68 (77%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLAR+VAHHTEC FIRVSGSELVQK+IGEGSRMVRELF+MAR S MD
Sbjct: 189 TGKTLLARSVAHHTECKFIRVSGSELVQKYIGEGSRMVRELFIMAREHAPS----IIFMD 244
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 245 EIDSIGSS 252
>gi|321258374|ref|XP_003193908.1| 26S protease regulatory subunit 6B [Cryptococcus gattii WM276]
gi|317460378|gb|ADV22121.1| 26S protease regulatory subunit 6B, putative [Cryptococcus gattii
WM276]
Length = 407
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 218/298 (73%), Positives = 238/298 (79%), Gaps = 30/298 (10%)
Query: 82 FKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKP 141
K YY KIE +L + K QNLRRL+AQRN LNA+VR+LREELQ+LQE GSYVGEV+K
Sbjct: 20 IKTYYQNKIEAAELDITRKTQNLRRLEAQRNALNARVRLLREELQVLQEPGSYVGEVIKV 79
Query: 142 MDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMM 201
M KKKVLVKV PEGK+VVD +I ++ +TPN RV+LR +SY LH ILPNK+DPLVSLMM
Sbjct: 80 MGKKKVLVKVQPEGKYVVDFSPDIPVSALTPNIRVSLRADSYLLHSILPNKIDPLVSLMM 139
Query: 202 VEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLL 261
VEKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELF++LGIAQPKGVLLYGPPGTGKTLL
Sbjct: 140 VEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFESLGIAQPKGVLLYGPPGTGKTLL 199
Query: 262 ARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTIL 321
ARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 200 ARAVAHHTDCRFIRVSGSELVQKYIGEGSRMVRELFVMA--------------------- 238
Query: 322 TNTIVCNFREHAPSIIFMDEIDSIGSSRIESGS-GGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGSSR E G GDSEVQRTM+ELLNQLDGFEATK
Sbjct: 239 --------REHAPSIIFMDEIDSIGSSRGEGGGKSGDSEVQRTMMELLNQLDGFEATK 288
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/70 (70%), Positives = 54/70 (77%), Gaps = 4/70 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMAR S MD
Sbjct: 194 TGKTLLARAVAHHTDCRFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPS----IIFMD 249
Query: 72 VDEAIKSSEG 81
++I SS G
Sbjct: 250 EIDSIGSSRG 259
>gi|238883749|gb|EEQ47387.1| 26S protease regulatory subunit 8 [Candida albicans WO-1]
Length = 401
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 212/311 (68%), Positives = 249/311 (80%), Gaps = 29/311 (9%)
Query: 68 FTMDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQL 127
T +D++ G +PY+ +I++ ++ + + QNLRRL+AQRN+LN KVR L++EL+L
Sbjct: 1 MTTSIDKSYVHEGGIRPYFEQQIQDTEIRIQQTTQNLRRLEAQRNKLNNKVRQLKDELRL 60
Query: 128 LQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHK 187
LQE GSYVGEVVK M KKVLVK+HPEGKF+V++ K+ID+ +TP+ RV L+ +S+ L+K
Sbjct: 61 LQEPGSYVGEVVKVMGLKKVLVKIHPEGKFIVNVTKDIDVKKLTPSIRVCLKADSHDLYK 120
Query: 188 ILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKG 247
ILPNKVDPLVSLMMVEKVPDSTY+MVGGLD QIKEIKEVIELPVKHPELF++LGIAQPKG
Sbjct: 121 ILPNKVDPLVSLMMVEKVPDSTYDMVGGLDKQIKEIKEVIELPVKHPELFESLGIAQPKG 180
Query: 248 VLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAF 307
V+LYGPPGTGKTLLARAVAHHTEC FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 181 VILYGPPGTGKTLLARAVAHHTECKFIRVSGSELVQKYIGEGSRMVRELFVMA------- 233
Query: 308 AHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLEL 367
REHAPSIIFMDEIDSIGSSR+E SGGDSEVQRTMLEL
Sbjct: 234 ----------------------REHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLEL 271
Query: 368 LNQLDGFEATK 378
LNQLDGFE++K
Sbjct: 272 LNQLDGFESSK 282
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/68 (72%), Positives = 53/68 (77%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHTEC FIRVSGSELVQK+IGEGSRMVRELFVMAR S MD
Sbjct: 189 TGKTLLARAVAHHTECKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPS----IIFMD 244
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 245 EIDSIGSS 252
>gi|164661922|ref|XP_001732083.1| hypothetical protein MGL_0676 [Malassezia globosa CBS 7966]
gi|159105985|gb|EDP44869.1| hypothetical protein MGL_0676 [Malassezia globosa CBS 7966]
Length = 421
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 214/298 (71%), Positives = 241/298 (80%), Gaps = 29/298 (9%)
Query: 81 GFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVK 140
G + ++++KI+ +L + EK QNLRRL+AQRN LNA+VR++ EELQLLQE GSYVGEV K
Sbjct: 34 GVQSFFLSKIQSYELTINEKAQNLRRLEAQRNALNARVRLIHEELQLLQEPGSYVGEVEK 93
Query: 141 PMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLM 200
M KKKVLVK+ PEGK+VV I +ID+ + P+ RVALR++SYTLHKILPNK+DPLVSLM
Sbjct: 94 VMGKKKVLVKIQPEGKYVVGIAPDIDVTQLKPSLRVALRSDSYTLHKILPNKIDPLVSLM 153
Query: 201 MVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTL 260
MVEKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELF++LGIAQPKGVLLYGPPGTGKTL
Sbjct: 154 MVEKVPDSTYEMVGGLDRQIKEIKEVIELPVKHPELFESLGIAQPKGVLLYGPPGTGKTL 213
Query: 261 LARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTI 320
LARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 214 LARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMA-------------------- 253
Query: 321 LTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGSSR + G GDSEVQRTMLELLNQLDGFE T+
Sbjct: 254 ---------REHAPSIIFMDEIDSIGSSRGDDGGNGDSEVQRTMLELLNQLDGFEGTQ 302
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/70 (70%), Positives = 54/70 (77%), Gaps = 4/70 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMAR S MD
Sbjct: 209 TGKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPS----IIFMD 264
Query: 72 VDEAIKSSEG 81
++I SS G
Sbjct: 265 EIDSIGSSRG 274
>gi|50419163|ref|XP_458104.1| DEHA2C09658p [Debaryomyces hansenii CBS767]
gi|49653770|emb|CAG86175.1| DEHA2C09658p [Debaryomyces hansenii CBS767]
Length = 401
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 212/298 (71%), Positives = 242/298 (81%), Gaps = 29/298 (9%)
Query: 81 GFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVK 140
G KPY+ +I++ ++ + QNLRRL+AQRN+LN KVR L++EL+LLQE GSYVGEVVK
Sbjct: 14 GIKPYFEQQIQDAEIKIQTTTQNLRRLEAQRNKLNNKVRQLKDELRLLQEPGSYVGEVVK 73
Query: 141 PMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLM 200
M KKVLVK+HPEGK++V+I K+IDI +TP+ RV L+ +SY LHKILPNKVDPLVSLM
Sbjct: 74 VMGLKKVLVKIHPEGKYIVNISKDIDIKKLTPSLRVCLKADSYDLHKILPNKVDPLVSLM 133
Query: 201 MVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTL 260
MVEKVPDSTY+MVGGLD QIKEIKEVIELPVKHPELF++LGIAQPKGV+LYGPPGTGKTL
Sbjct: 134 MVEKVPDSTYDMVGGLDKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTL 193
Query: 261 LARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTI 320
LAR+VAHHTEC FIRVSGSELVQK+IGEGSRMVRELF+MA
Sbjct: 194 LARSVAHHTECKFIRVSGSELVQKYIGEGSRMVRELFIMA-------------------- 233
Query: 321 LTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGSSR+E SGGDSEVQRTMLELLNQLDGFE +K
Sbjct: 234 ---------REHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFENSK 282
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 53/68 (77%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLAR+VAHHTEC FIRVSGSELVQK+IGEGSRMVRELF+MAR S MD
Sbjct: 189 TGKTLLARSVAHHTECKFIRVSGSELVQKYIGEGSRMVRELFIMAREHAPS----IIFMD 244
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 245 EIDSIGSS 252
>gi|190347389|gb|EDK39646.2| hypothetical protein PGUG_03744 [Meyerozyma guilliermondii ATCC
6260]
Length = 421
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 216/316 (68%), Positives = 249/316 (78%), Gaps = 31/316 (9%)
Query: 65 TEFFTM--DVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLR 122
T F TM +V G KP++ +I++ ++ + QNLRRL+AQRN+LN KVR LR
Sbjct: 16 TTFHTMTAEVTNRYVHQGGIKPFFEQQIQDAEIKIQTTTQNLRRLEAQRNKLNNKVRQLR 75
Query: 123 EELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNES 182
+EL+LLQE GSYVGEVVK M KKVLVK+HPEGK++V+I K+IDI +TP+ RV L+ +S
Sbjct: 76 DELRLLQEPGSYVGEVVKVMGLKKVLVKIHPEGKYIVNISKDIDIKKLTPSLRVCLKADS 135
Query: 183 YTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGI 242
Y LHKILPNKVDPLVSLMMVEKVPDSTY+MVGGLD QIKEI+EVIELPVKHPELF++LGI
Sbjct: 136 YDLHKILPNKVDPLVSLMMVEKVPDSTYDMVGGLDKQIKEIREVIELPVKHPELFESLGI 195
Query: 243 AQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASL 302
AQPKGV+LYGPPGTGKTLLAR+VA+HTEC FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 196 AQPKGVILYGPPGTGKTLLARSVAYHTECKFIRVSGSELVQKYIGEGSRMVRELFVMA-- 253
Query: 303 KKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQR 362
REHAPSIIFMDEIDSIGSSR+E SGGDSEVQR
Sbjct: 254 ---------------------------REHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQR 286
Query: 363 TMLELLNQLDGFEATK 378
TMLELLNQLDGFE++K
Sbjct: 287 TMLELLNQLDGFESSK 302
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 53/68 (77%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLAR+VA+HTEC FIRVSGSELVQK+IGEGSRMVRELFVMAR S MD
Sbjct: 209 TGKTLLARSVAYHTECKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPS----IIFMD 264
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 265 EIDSIGSS 272
>gi|241952094|ref|XP_002418769.1| 26S protease regulatory subunit, putative [Candida dubliniensis
CD36]
gi|223642108|emb|CAX44074.1| 26S protease regulatory subunit, putative [Candida dubliniensis
CD36]
Length = 463
Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust.
Identities = 211/311 (67%), Positives = 248/311 (79%), Gaps = 29/311 (9%)
Query: 68 FTMDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQL 127
T +D+ G +PY+ +I++ ++ + + QNLRRL+AQRN+LN KVR L++EL+L
Sbjct: 63 MTTSIDKPYVHEGGIRPYFEQQIQDTEIRIQQTTQNLRRLEAQRNKLNNKVRQLKDELRL 122
Query: 128 LQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHK 187
LQE GSYVGEVVK M KKVLVK+HPEGKF+V++ K+ID+ +TP+ RV L+ +S+ L+K
Sbjct: 123 LQEPGSYVGEVVKVMGLKKVLVKIHPEGKFIVNVTKDIDVKKLTPSIRVCLKADSHDLYK 182
Query: 188 ILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKG 247
ILPNK+DPLVSLMMVEKVPDSTY+MVGGLD QIKEIKEVIELPVKHPELF++LGIAQPKG
Sbjct: 183 ILPNKIDPLVSLMMVEKVPDSTYDMVGGLDKQIKEIKEVIELPVKHPELFESLGIAQPKG 242
Query: 248 VLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAF 307
V+LYGPPGTGKTLLARAVAHHTEC FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 243 VILYGPPGTGKTLLARAVAHHTECKFIRVSGSELVQKYIGEGSRMVRELFVMA------- 295
Query: 308 AHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLEL 367
REHAPSIIFMDEIDSIGSSR+E SGGDSEVQRTMLEL
Sbjct: 296 ----------------------REHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLEL 333
Query: 368 LNQLDGFEATK 378
LNQLDGFE++K
Sbjct: 334 LNQLDGFESSK 344
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/68 (72%), Positives = 53/68 (77%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHTEC FIRVSGSELVQK+IGEGSRMVRELFVMAR S MD
Sbjct: 251 TGKTLLARAVAHHTECKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPS----IIFMD 306
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 307 EIDSIGSS 314
>gi|281351659|gb|EFB27243.1| hypothetical protein PANDA_013936 [Ailuropoda melanoleuca]
Length = 357
Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust.
Identities = 226/267 (84%), Positives = 235/267 (88%), Gaps = 29/267 (10%)
Query: 112 NELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVT 171
NELNAKVR+LREELQLLQEQGSYVGEVV+ MDKKKVLVKVHPEGKFVVD+DKNIDINDVT
Sbjct: 1 NELNAKVRLLREELQLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVT 60
Query: 172 PNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPV 231
PNCRVALRN+SYTLHKILPNKVDPLVSLMMVEKVPDSTYEM+GGLD QIKEIKEVIELPV
Sbjct: 61 PNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPV 120
Query: 232 KHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSR 291
KHPELF+ALGIAQPKGVLLYGPPGTGKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+R
Sbjct: 121 KHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGAR 180
Query: 292 MVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIE 351
MVRELFVMA REHAPSIIFMDEIDSIGSSR+E
Sbjct: 181 MVRELFVMA-----------------------------REHAPSIIFMDEIDSIGSSRLE 211
Query: 352 SGSGGDSEVQRTMLELLNQLDGFEATK 378
GSGGDSEVQRTMLELLNQLDGFEATK
Sbjct: 212 GGSGGDSEVQRTMLELLNQLDGFEATK 238
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/68 (72%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMAR S MD
Sbjct: 145 TGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPS----IIFMD 200
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 201 EIDSIGSS 208
>gi|255725408|ref|XP_002547633.1| 26S protease regulatory subunit 8 [Candida tropicalis MYA-3404]
gi|240135524|gb|EER35078.1| 26S protease regulatory subunit 8 [Candida tropicalis MYA-3404]
Length = 419
Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust.
Identities = 210/298 (70%), Positives = 244/298 (81%), Gaps = 29/298 (9%)
Query: 81 GFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVK 140
G +PY+ +I++ ++ + + QNLRRL+AQRN+LN KVR L++EL+LLQE GSYVGEVVK
Sbjct: 32 GIRPYFEQQIQDTEIRIQQTTQNLRRLEAQRNKLNNKVRQLKDELRLLQEPGSYVGEVVK 91
Query: 141 PMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLM 200
M KKVLVK+HPEGKF+V++ K+ID+ +TP+ RV L+ +S+ L+KILPNKVDPLVSLM
Sbjct: 92 VMGLKKVLVKIHPEGKFIVNVTKDIDVKKLTPSIRVCLKADSHDLYKILPNKVDPLVSLM 151
Query: 201 MVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTL 260
MVEKVPDSTY+MVGGLD QIKEIKEVIELPVKHPELF++LGIAQPKGV+LYGPPGTGKTL
Sbjct: 152 MVEKVPDSTYDMVGGLDKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTL 211
Query: 261 LARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTI 320
LARAVAHHTEC FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 212 LARAVAHHTECKFIRVSGSELVQKYIGEGSRMVRELFVMA-------------------- 251
Query: 321 LTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGSSR+E SGGDSEVQRTMLELLNQLDGFE++K
Sbjct: 252 ---------REHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFESSK 300
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/68 (72%), Positives = 53/68 (77%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHTEC FIRVSGSELVQK+IGEGSRMVRELFVMAR S MD
Sbjct: 207 TGKTLLARAVAHHTECKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPS----IIFMD 262
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 263 EIDSIGSS 270
>gi|68483210|ref|XP_714440.1| likely 26S proteasome regulatory particle ATPase Rpt6p [Candida
albicans SC5314]
gi|46436003|gb|EAK95373.1| likely 26S proteasome regulatory particle ATPase Rpt6p [Candida
albicans SC5314]
Length = 401
Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust.
Identities = 211/311 (67%), Positives = 248/311 (79%), Gaps = 29/311 (9%)
Query: 68 FTMDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQL 127
T +D++ G +PY+ +I++ ++ + + QNLRRL+AQRN+LN KVR L++EL+L
Sbjct: 1 MTTSIDKSYVHEGGIRPYFEQQIQDTEIRIQQTTQNLRRLEAQRNKLNNKVRQLKDELKL 60
Query: 128 LQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHK 187
LQE GSYVGEVVK M KKVLVK+HPEGKF+V++ K+ID+ +TP+ RV L+ +S+ L+K
Sbjct: 61 LQEPGSYVGEVVKVMGLKKVLVKIHPEGKFIVNVTKDIDVKKLTPSIRVCLKPDSHDLYK 120
Query: 188 ILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKG 247
ILP KVDPLVSLMMVEKVPDSTY+MVGGLD QIKEIKEVIELPVKHPELF++LGIAQPKG
Sbjct: 121 ILPTKVDPLVSLMMVEKVPDSTYDMVGGLDKQIKEIKEVIELPVKHPELFESLGIAQPKG 180
Query: 248 VLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAF 307
V+LYGPPGTGKTLLARAVAHHTEC FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 181 VILYGPPGTGKTLLARAVAHHTECKFIRVSGSELVQKYIGEGSRMVRELFVMA------- 233
Query: 308 AHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLEL 367
REHAPSIIFMDEIDSIGSSR+E SGGDSEVQRTMLEL
Sbjct: 234 ----------------------REHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLEL 271
Query: 368 LNQLDGFEATK 378
LNQLDGFE++K
Sbjct: 272 LNQLDGFESSK 282
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/68 (72%), Positives = 53/68 (77%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHTEC FIRVSGSELVQK+IGEGSRMVRELFVMAR S MD
Sbjct: 189 TGKTLLARAVAHHTECKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPS----IIFMD 244
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 245 EIDSIGSS 252
>gi|50550915|ref|XP_502931.1| YALI0D17204p [Yarrowia lipolytica]
gi|49648799|emb|CAG81122.1| YALI0D17204p [Yarrowia lipolytica CLIB122]
Length = 406
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 216/304 (71%), Positives = 247/304 (81%), Gaps = 32/304 (10%)
Query: 78 SSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGE 137
SS G P++ +IE+ +L + +K QNLRRL+AQRN LN KVR+L++EL +LQE GSYVGE
Sbjct: 13 SSSGIAPFFAQQIEDFELKINKKLQNLRRLEAQRNALNTKVRLLKDELHVLQESGSYVGE 72
Query: 138 VVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLV 197
V+K M K+KVLVKVHPEGK+VVDI ++DI +TP+ RV LR++SYTLH+ILPNKVDPLV
Sbjct: 73 VIKIMGKQKVLVKVHPEGKYVVDIAPDLDIKKITPSLRVCLRSDSYTLHQILPNKVDPLV 132
Query: 198 SLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTG 257
SLMMVEKVPDSTY+MVGGLD QIKEIKEVIELPVKHPELF++LGIAQPKGV+LYGPPGTG
Sbjct: 133 SLMMVEKVPDSTYDMVGGLDQQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTG 192
Query: 258 KTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSL 317
KTLLARAVAHHTEC FIRVSGSELVQK+IGEGSRMVRELF+MA
Sbjct: 193 KTLLARAVAHHTECKFIRVSGSELVQKYIGEGSRMVRELFIMA----------------- 235
Query: 318 LTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIES---GSGGDSEVQRTMLELLNQLDGF 374
REHAPSIIFMDEIDSIGS+R ES G GGDSEVQRTMLELLNQLDGF
Sbjct: 236 ------------REHAPSIIFMDEIDSIGSARTESGGGGGGGDSEVQRTMLELLNQLDGF 283
Query: 375 EATK 378
E++K
Sbjct: 284 ESSK 287
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/46 (91%), Positives = 45/46 (97%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHTEC FIRVSGSELVQK+IGEGSRMVRELF+MAR
Sbjct: 191 TGKTLLARAVAHHTECKFIRVSGSELVQKYIGEGSRMVRELFIMAR 236
>gi|146416787|ref|XP_001484363.1| hypothetical protein PGUG_03744 [Meyerozyma guilliermondii ATCC
6260]
Length = 421
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 215/316 (68%), Positives = 248/316 (78%), Gaps = 31/316 (9%)
Query: 65 TEFFTM--DVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLR 122
T F TM +V G KP++ +I++ ++ + QNLRRL+AQRN+LN KVR LR
Sbjct: 16 TTFHTMTAEVTNRYVHQGGIKPFFEQQIQDAEIKIQTTTQNLRRLEAQRNKLNNKVRQLR 75
Query: 123 EELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNES 182
+EL+LLQE GSYVGEVVK M KKVLVK+HPEGK++V+I K+IDI +TP+ RV L+ +S
Sbjct: 76 DELRLLQEPGSYVGEVVKVMGLKKVLVKIHPEGKYIVNISKDIDIKKLTPSLRVCLKADS 135
Query: 183 YTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGI 242
Y LHKILPNKVDPLVSLMMVEKVPDSTY+MVGGLD QIKEI+EVIELPVKHPELF++LGI
Sbjct: 136 YDLHKILPNKVDPLVSLMMVEKVPDSTYDMVGGLDKQIKEIREVIELPVKHPELFESLGI 195
Query: 243 AQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASL 302
AQPKGV+LYGPPGTGKTLLAR+VA+HTEC FIRV GSELVQK+IGEGSRMVRELFVMA
Sbjct: 196 AQPKGVILYGPPGTGKTLLARSVAYHTECKFIRVLGSELVQKYIGEGSRMVRELFVMA-- 253
Query: 303 KKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQR 362
REHAPSIIFMDEIDSIGSSR+E SGGDSEVQR
Sbjct: 254 ---------------------------REHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQR 286
Query: 363 TMLELLNQLDGFEATK 378
TMLELLNQLDGFE++K
Sbjct: 287 TMLELLNQLDGFESSK 302
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/68 (67%), Positives = 52/68 (76%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLAR+VA+HTEC FIRV GSELVQK+IGEGSRMVRELFVMAR S MD
Sbjct: 209 TGKTLLARSVAYHTECKFIRVLGSELVQKYIGEGSRMVRELFVMAREHAPS----IIFMD 264
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 265 EIDSIGSS 272
>gi|448522247|ref|XP_003868648.1| Rpt6 ATPase of the 19S regulatory particle of the 26S proteasome
[Candida orthopsilosis Co 90-125]
gi|380352988|emb|CCG25744.1| Rpt6 ATPase of the 19S regulatory particle of the 26S proteasome
[Candida orthopsilosis]
Length = 415
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 211/324 (65%), Positives = 252/324 (77%), Gaps = 38/324 (11%)
Query: 64 GTEFFTMDVDEAIKSSE---------GFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNEL 114
T+ FT+D I S+ G +PY+ +I++ ++ + ++ QNLRRL+AQRN+L
Sbjct: 2 ATQLFTLDTSPTIMSTTIDKPYVHEGGIRPYFEQQIQDTEIEIQQRTQNLRRLEAQRNKL 61
Query: 115 NAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNC 174
N VR L++EL+LLQE GS+VGEV+K M KKVLVK+HPEGK++V++ K+IDI +TP+
Sbjct: 62 NNSVRQLKDELRLLQEPGSFVGEVIKVMGTKKVLVKIHPEGKYIVNVTKDIDIKKLTPSI 121
Query: 175 RVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHP 234
RV L+ +S+ L+KILPNKVDPLVSLMMVEKVPDSTY+MVGGLD QIKEIKEVIELPVK+P
Sbjct: 122 RVCLKADSHDLYKILPNKVDPLVSLMMVEKVPDSTYDMVGGLDKQIKEIKEVIELPVKYP 181
Query: 235 ELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVR 294
ELF +LGIAQPKGV+LYGPPGTGKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVR
Sbjct: 182 ELFSSLGIAQPKGVILYGPPGTGKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVR 241
Query: 295 ELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGS 354
ELFVMA REHAPSIIFMDEIDSIGSSR+E S
Sbjct: 242 ELFVMA-----------------------------REHAPSIIFMDEIDSIGSSRVEGSS 272
Query: 355 GGDSEVQRTMLELLNQLDGFEATK 378
GGDSEVQRTMLELLNQLDGFE++K
Sbjct: 273 GGDSEVQRTMLELLNQLDGFESSK 296
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 53/68 (77%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMAR S MD
Sbjct: 203 TGKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPS----IIFMD 258
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 259 EIDSIGSS 266
>gi|115468800|ref|NP_001057999.1| Os06g0600100 [Oryza sativa Japonica Group]
gi|50725031|dbj|BAD32833.1| putative 26S proteasome regulatory particle triple-A ATPase
subunit6 [Oryza sativa Japonica Group]
gi|50725483|dbj|BAD32954.1| putative 26S proteasome regulatory particle triple-A ATPase
subunit6 [Oryza sativa Japonica Group]
gi|113596039|dbj|BAF19913.1| Os06g0600100 [Oryza sativa Japonica Group]
gi|215686740|dbj|BAG89590.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222635839|gb|EEE65971.1| hypothetical protein OsJ_21883 [Oryza sativa Japonica Group]
Length = 423
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 212/299 (70%), Positives = 244/299 (81%), Gaps = 30/299 (10%)
Query: 80 EGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVV 139
+G +PYY ++I +LQL + + NL RL+AQRN LN++V L EEL++L E GSYVGEVV
Sbjct: 34 DGLRPYYQSRIHDLQLQIRQGTDNLSRLEAQRNVLNSQVITLGEELKVLHEPGSYVGEVV 93
Query: 140 KPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSL 199
K M K KVLVKVHPEGK+VVD+DK+IDI ++P+ RVALRN+SY LH ILP+KVDPLV+L
Sbjct: 94 KVMGKSKVLVKVHPEGKYVVDVDKSIDITKLSPSTRVALRNDSYMLHLILPSKVDPLVNL 153
Query: 200 MMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKT 259
M VEKVPDSTY+M+GGLD QIKEIKEVIELP+KHPELF++LGIAQPKGVLLYGPPGTGKT
Sbjct: 154 MKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKT 213
Query: 260 LLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLT 319
LLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 214 LLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMA------------------- 254
Query: 320 ILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGS-GGDSEVQRTMLELLNQLDGFEAT 377
REHAPSIIFMDEIDSIGS+R++SGS GGDSEVQRTMLELLNQLDGFEA+
Sbjct: 255 ----------REHAPSIIFMDEIDSIGSARMQSGSGGGDSEVQRTMLELLNQLDGFEAS 303
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 43/46 (93%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMAR
Sbjct: 210 TGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAR 255
>gi|344302603|gb|EGW32877.1| protease regulatory subunit 8 (TAT-binding protein TBY1)
[Spathaspora passalidarum NRRL Y-27907]
Length = 402
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 208/310 (67%), Positives = 247/310 (79%), Gaps = 29/310 (9%)
Query: 69 TMDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLL 128
T +D G +PY+ +I++ ++ + + QNLRRL+AQRN+LN KVR L++EL+LL
Sbjct: 3 TASIDRPYVHEGGIRPYFEQQIQDTEIRIQQTTQNLRRLEAQRNKLNNKVRQLKDELRLL 62
Query: 129 QEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKI 188
QE GS+VGEV+K M KKVLVK+HPEGK++V++ K+ID+ +TP+ RV L+ +S+ L+KI
Sbjct: 63 QEPGSFVGEVIKVMGLKKVLVKIHPEGKYIVNVTKDIDVKKLTPSIRVCLKADSHDLYKI 122
Query: 189 LPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGV 248
LPNKVDPLVSLMMVEKVPDSTY+MVGGLD QIKEIKEVIELPVKHPELF++LGIAQPKGV
Sbjct: 123 LPNKVDPLVSLMMVEKVPDSTYDMVGGLDKQIKEIKEVIELPVKHPELFESLGIAQPKGV 182
Query: 249 LLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFA 308
+LYGPPGTGKTLLARAVAHHTEC FIRVSGSELVQK+IGEGSRMVRELF+MA
Sbjct: 183 ILYGPPGTGKTLLARAVAHHTECKFIRVSGSELVQKYIGEGSRMVRELFIMA-------- 234
Query: 309 HHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELL 368
REHAPSIIFMDEIDSIGSSR+E SGGDSEVQRTMLELL
Sbjct: 235 ---------------------REHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELL 273
Query: 369 NQLDGFEATK 378
NQLDGFE++K
Sbjct: 274 NQLDGFESSK 283
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 53/68 (77%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHTEC FIRVSGSELVQK+IGEGSRMVRELF+MAR S MD
Sbjct: 190 TGKTLLARAVAHHTECKFIRVSGSELVQKYIGEGSRMVRELFIMAREHAPS----IIFMD 245
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 246 EIDSIGSS 253
>gi|408474490|gb|AFU72269.1| proteasome 26S subunit, partial [Solen grandis]
Length = 244
Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust.
Identities = 210/232 (90%), Positives = 219/232 (94%), Gaps = 1/232 (0%)
Query: 70 MDVDEAIKSS-EGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLL 128
M+VD+ + EG K YY +KIE LQL+V +K QNLRRL+AQRNELNAKVRMLREELQLL
Sbjct: 6 MEVDDGPPPNHEGIKQYYGSKIETLQLVVTDKTQNLRRLEAQRNELNAKVRMLREELQLL 65
Query: 129 QEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKI 188
QEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRN+SYTLHKI
Sbjct: 66 QEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNDSYTLHKI 125
Query: 189 LPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGV 248
LPNKVDPLVSLMMVEKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELF+ALGIAQPKGV
Sbjct: 126 LPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGV 185
Query: 249 LLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
LL GPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA
Sbjct: 186 LLCGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 237
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/46 (97%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR
Sbjct: 193 TGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 238
>gi|406601656|emb|CCH46709.1| 26S protease regulatory subunit [Wickerhamomyces ciferrii]
Length = 395
Score = 423 bits (1087), Expect = e-116, Method: Compositional matrix adjust.
Identities = 210/298 (70%), Positives = 242/298 (81%), Gaps = 30/298 (10%)
Query: 81 GFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVK 140
G KP +I++ ++ + K NLRRL+AQRN LN++VR+L++EL+LLQE GSYVGEVVK
Sbjct: 9 GIKPVK-QRIQDTEIQINSKTLNLRRLEAQRNTLNSRVRLLKDELKLLQEPGSYVGEVVK 67
Query: 141 PMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLM 200
P+ KKK+LVK+HPEGK++V++ ID+ DV P+ RV L+++SYTLHKILPNKVDPLVSLM
Sbjct: 68 PLSKKKILVKMHPEGKYIVNLAPEIDVKDVKPSLRVCLKSDSYTLHKILPNKVDPLVSLM 127
Query: 201 MVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTL 260
MVEKVPDSTY+MVGGL QIKEIKEVIELPVKHPELF++LGIAQPKGV+LYGPPGTGKTL
Sbjct: 128 MVEKVPDSTYDMVGGLTKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTL 187
Query: 261 LARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTI 320
LARAVAHHTEC FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 188 LARAVAHHTECKFIRVSGSELVQKYIGEGSRMVRELFVMA-------------------- 227
Query: 321 LTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGSSR+E SGGDSEVQRTMLELLNQLDGFE +K
Sbjct: 228 ---------REHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFENSK 276
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/68 (72%), Positives = 53/68 (77%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHTEC FIRVSGSELVQK+IGEGSRMVRELFVMAR S MD
Sbjct: 183 TGKTLLARAVAHHTECKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPS----IIFMD 238
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 239 EIDSIGSS 246
>gi|218198492|gb|EEC80919.1| hypothetical protein OsI_23597 [Oryza sativa Indica Group]
Length = 423
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 211/299 (70%), Positives = 244/299 (81%), Gaps = 30/299 (10%)
Query: 80 EGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVV 139
+G +PYY ++I +L+L + + NL RL+AQRN LN++V L EEL++L E GSYVGEVV
Sbjct: 34 DGLRPYYQSRIHDLELQIRQGTDNLSRLEAQRNVLNSQVITLGEELKVLHEPGSYVGEVV 93
Query: 140 KPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSL 199
K M K KVLVKVHPEGK+VVD+DK+IDI ++P+ RVALRN+SY LH ILP+KVDPLV+L
Sbjct: 94 KVMGKSKVLVKVHPEGKYVVDVDKSIDITKLSPSTRVALRNDSYMLHLILPSKVDPLVNL 153
Query: 200 MMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKT 259
M VEKVPDSTY+M+GGLD QIKEIKEVIELP+KHPELF++LGIAQPKGVLLYGPPGTGKT
Sbjct: 154 MKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKT 213
Query: 260 LLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLT 319
LLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 214 LLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMA------------------- 254
Query: 320 ILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGS-GGDSEVQRTMLELLNQLDGFEAT 377
REHAPSIIFMDEIDSIGS+R++SGS GGDSEVQRTMLELLNQLDGFEA+
Sbjct: 255 ----------REHAPSIIFMDEIDSIGSARMQSGSGGGDSEVQRTMLELLNQLDGFEAS 303
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/46 (93%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMAR
Sbjct: 210 TGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAR 255
>gi|268561690|ref|XP_002646506.1| Hypothetical protein CBG20339 [Caenorhabditis briggsae]
gi|268561700|ref|XP_002646508.1| Hypothetical protein CBG20343 [Caenorhabditis briggsae]
Length = 415
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 211/298 (70%), Positives = 238/298 (79%), Gaps = 30/298 (10%)
Query: 82 FKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKP 141
+ Y+ TK++E + V EKEQ +RRL A +NELN KV L+EE+ L EQ S+VGEV K
Sbjct: 28 LRQYWKTKLDEAEQQVREKEQTIRRLGASKNELNGKVGQLKEEINRLHEQASHVGEVCKA 87
Query: 142 MDKKKVLVKVHPEGKFVVDIDK-NIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLM 200
MDKKKVLVK HP+GK++V++D ++D++ +T RVA++ +SY +HK+LPNKVDPLVSLM
Sbjct: 88 MDKKKVLVKSHPDGKYIVNVDSVSVDMSQMTAGTRVAMKADSYMIHKVLPNKVDPLVSLM 147
Query: 201 MVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTL 260
MVEKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTL
Sbjct: 148 MVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTL 207
Query: 261 LARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTI 320
LARAVAHHTECTFIRVSGSELVQKFIGEG+RMVRELFVMA
Sbjct: 208 LARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMA-------------------- 247
Query: 321 LTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGSSR+E SGGDSEVQRTMLELLNQLDGFEATK
Sbjct: 248 ---------REHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFEATK 296
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/68 (73%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHTECTFIRVSGSELVQKFIGEG+RMVRELFVMAR S MD
Sbjct: 203 TGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPS----IIFMD 258
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 259 EIDSIGSS 266
>gi|149240323|ref|XP_001526037.1| 26S protease regulatory subunit 8 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146450160|gb|EDK44416.1| 26S protease regulatory subunit 8 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 401
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 207/307 (67%), Positives = 245/307 (79%), Gaps = 29/307 (9%)
Query: 72 VDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQ 131
VD+ G +PY+ +I++ ++ + + QNLRRL+AQRN+LN VR L++EL+LLQE
Sbjct: 5 VDKPYTHESGIRPYFEQQIQDTEIEIQQTTQNLRRLEAQRNKLNNSVRQLKDELRLLQEP 64
Query: 132 GSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPN 191
GSYVGEV+K M KKVLVK+HPEGK++V++ K++DI +TP+ RV L+ +S+ L+KILPN
Sbjct: 65 GSYVGEVIKVMGTKKVLVKIHPEGKYIVNVTKDVDIKKLTPSIRVCLKADSHDLYKILPN 124
Query: 192 KVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLY 251
KVDPLVSLMMVEKVPDSTY+MVGGLD QIKEIKEVIELPVK+PELF +LGIAQPKGV+LY
Sbjct: 125 KVDPLVSLMMVEKVPDSTYDMVGGLDKQIKEIKEVIELPVKYPELFSSLGIAQPKGVILY 184
Query: 252 GPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHP 311
GPPGTGKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 185 GPPGTGKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMA----------- 233
Query: 312 LLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQL 371
REHAPSIIFMDEIDSIGSSR+E SGGDSEVQRTMLELLNQL
Sbjct: 234 ------------------REHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQL 275
Query: 372 DGFEATK 378
DGFE++K
Sbjct: 276 DGFESSK 282
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 53/68 (77%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMAR S MD
Sbjct: 189 TGKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPS----IIFMD 244
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 245 EIDSIGSS 252
>gi|428178522|gb|EKX47397.1| 26S proteasome regulatory complex, ATPase RPT6 [Guillardia theta
CCMP2712]
Length = 403
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 221/323 (68%), Positives = 249/323 (77%), Gaps = 40/323 (12%)
Query: 55 MARCKGSSRGTEFFTMDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNEL 114
MA CK + +F S G YY KIEEL+ + EK QNLRRL+AQRNEL
Sbjct: 1 MASCKAQAANPQF-----------SAGIHSYYQGKIEELEAVYREKAQNLRRLEAQRNEL 49
Query: 115 NAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNC 174
N KVR+LREEL LLQE SYVGEVVK M K KVLVKV+P+GK+VVD+D +ID++++ PN
Sbjct: 50 NTKVRLLREELLLLQEPSSYVGEVVKAMGKNKVLVKVNPDGKYVVDLDSSIDVSEIKPNI 109
Query: 175 RVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHP 234
RVALRN+SY LHKILP+KVDPLVSLM VEKVPDSTYE +GGLD Q+KEIKEVIELP+KHP
Sbjct: 110 RVALRNDSYVLHKILPSKVDPLVSLMRVEKVPDSTYETIGGLDKQVKEIKEVIELPIKHP 169
Query: 235 ELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVR 294
E+F++LGIAQPKGVLLYGPPGTGKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVR
Sbjct: 170 EIFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCCFIRVSGSELVQKYIGEGSRMVR 229
Query: 295 ELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGS 354
ELFVMA REHAPSIIFMDE+DSIGSSRIE
Sbjct: 230 ELFVMA-----------------------------REHAPSIIFMDEVDSIGSSRIEGSE 260
Query: 355 GGDSEVQRTMLELLNQLDGFEAT 377
GGDSEVQRTMLELLNQLDGFE++
Sbjct: 261 GGDSEVQRTMLELLNQLDGFESS 283
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 53/68 (77%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMAR S MD
Sbjct: 191 TGKTLLARAVAHHTDCCFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPS----IIFMD 246
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 247 EVDSIGSS 254
>gi|83315560|ref|XP_730846.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23490696|gb|EAA22411.1| tat-binding protein homolog [Plasmodium yoelii yoelii]
Length = 442
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 214/306 (69%), Positives = 241/306 (78%), Gaps = 32/306 (10%)
Query: 73 DEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQG 132
DE +S G K YY KIEE + I+ +K QN +RL+AQRNELN +VR LR+E+Q L E
Sbjct: 30 DEETQS--GIKTYYEMKIEEYESIINKKLQNKKRLEAQRNELNTRVRELRDEIQYLLEAA 87
Query: 133 SYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNK 192
SYVGE+ KPM K KVLVK++PEGK+VVDI +IDI TPN RVAL N+SY LHKILP+K
Sbjct: 88 SYVGEIAKPMGKNKVLVKINPEGKYVVDIASHIDIAKCTPNTRVALYNDSYKLHKILPSK 147
Query: 193 VDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYG 252
VDPLVSLM VEKVPDSTYEMVGGLD Q+KE+KEVIELPVKHPE+F++LGI+QPKGVLLYG
Sbjct: 148 VDPLVSLMKVEKVPDSTYEMVGGLDQQVKEVKEVIELPVKHPEIFESLGISQPKGVLLYG 207
Query: 253 PPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPL 312
PPGTGKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 208 PPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMA------------ 255
Query: 313 LFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLD 372
REHAPSIIFMDEIDSIGS RIE G GDSEVQRTM+ELLNQLD
Sbjct: 256 -----------------REHAPSIIFMDEIDSIGSQRIE-GEHGDSEVQRTMMELLNQLD 297
Query: 373 GFEATK 378
GFE+T+
Sbjct: 298 GFESTQ 303
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 43/46 (93%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMAR
Sbjct: 211 TGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAR 256
>gi|328865731|gb|EGG14117.1| 26S proteasome subunit ATPase 5 [Dictyostelium fasciculatum]
Length = 396
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 216/301 (71%), Positives = 246/301 (81%), Gaps = 30/301 (9%)
Query: 79 SEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEV 138
++G K YYV+KIEEL++ V EK Q+LRRL+AQRNELN +VRML+EELQLL GS+V EV
Sbjct: 6 TKGIKSYYVSKIEELEIRVNEKSQDLRRLEAQRNELNNRVRMLKEELQLLTNPGSHVAEV 65
Query: 139 VKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVS 198
VK M + KVLVKV+PEGKFVVDID +ID++ +TP+ R AL++ESYTLH+ILPNK+DPLVS
Sbjct: 66 VKLMGRNKVLVKVNPEGKFVVDIDPSIDVSKLTPSTRAALKHESYTLHRILPNKIDPLVS 125
Query: 199 LMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGK 258
LM VEK+PDSTY+MVGGLD QIKEIKEVIELP+KHPELF++LGIAQPKGVLLYGPPGTGK
Sbjct: 126 LMKVEKIPDSTYDMVGGLDKQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGK 185
Query: 259 TLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLL 318
TLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELF+MA
Sbjct: 186 TLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFIMA------------------ 227
Query: 319 TILTNTIVCNFREHAPSIIFMDEIDSIGSSRI-ESGSGGDSEVQRTMLELLNQLDGFEAT 377
REHAPSIIFMDEIDSIGSSRI DSEVQRTMLELLNQLDGFE+T
Sbjct: 228 -----------REHAPSIIFMDEIDSIGSSRIESGSGSSDSEVQRTMLELLNQLDGFEST 276
Query: 378 K 378
K
Sbjct: 277 K 277
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELF+MAR S MD
Sbjct: 183 TGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFIMAREHAPS----IIFMD 238
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 239 EIDSIGSS 246
>gi|68067983|ref|XP_675910.1| tat-binding protein [Plasmodium berghei strain ANKA]
gi|56495356|emb|CAH93865.1| tat-binding protein homolog, putative [Plasmodium berghei]
Length = 422
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 214/306 (69%), Positives = 242/306 (79%), Gaps = 32/306 (10%)
Query: 73 DEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQG 132
DE ++S G K YY KIEE + I+ +K QN +RL+AQRNELN +VR LR+E+Q L E
Sbjct: 30 DEEMQS--GIKTYYEMKIEEYESIINKKLQNKKRLEAQRNELNTRVRELRDEIQYLLEAA 87
Query: 133 SYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNK 192
SYVGE+ KPM K KVLVK++PEGK+VVDI +IDI TPN RVAL N+SY LHKILP+K
Sbjct: 88 SYVGEIAKPMGKNKVLVKINPEGKYVVDIASHIDITKCTPNTRVALYNDSYKLHKILPSK 147
Query: 193 VDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYG 252
VDPLVSLM VEKVPDSTYEMVGGLD Q+KE+KEVIELPVKHPE+F++LGI+QPKGVLLYG
Sbjct: 148 VDPLVSLMKVEKVPDSTYEMVGGLDQQVKEVKEVIELPVKHPEIFESLGISQPKGVLLYG 207
Query: 253 PPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPL 312
PPGTGKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 208 PPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMA------------ 255
Query: 313 LFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLD 372
REHAPSIIFMDEIDSIGS RIE G GDSEVQRTM+ELLNQLD
Sbjct: 256 -----------------REHAPSIIFMDEIDSIGSQRIE-GEHGDSEVQRTMMELLNQLD 297
Query: 373 GFEATK 378
GFE+T+
Sbjct: 298 GFESTQ 303
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 43/46 (93%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMAR
Sbjct: 211 TGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAR 256
>gi|242093492|ref|XP_002437236.1| hypothetical protein SORBIDRAFT_10g023320 [Sorghum bicolor]
gi|241915459|gb|EER88603.1| hypothetical protein SORBIDRAFT_10g023320 [Sorghum bicolor]
Length = 419
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 209/298 (70%), Positives = 240/298 (80%), Gaps = 29/298 (9%)
Query: 80 EGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVV 139
EG YY I++L L V ++ +L RL+AQRN+LN++V+M REEL LLQE GS+VGEVV
Sbjct: 31 EGLGKYYNQHIQDLLLAVQQRISDLSRLEAQRNDLNSQVKMCREELHLLQEPGSHVGEVV 90
Query: 140 KPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSL 199
K M K KVLVKVHPEGK++VD+DK+IDI +TP+ RVALR+ SY LH ILP+KVDPLV+L
Sbjct: 91 KVMSKSKVLVKVHPEGKYIVDVDKSIDIAKLTPSTRVALRSGSYMLHVILPSKVDPLVNL 150
Query: 200 MMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKT 259
M VEKVP+STY+M+GGLD QIKEIKEVIELP+KHPELF++LGIAQPKGV+LYGPPGTGKT
Sbjct: 151 MKVEKVPNSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVILYGPPGTGKT 210
Query: 260 LLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLT 319
LLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 211 LLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMA------------------- 251
Query: 320 ILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEAT 377
REHAPSIIFMDEIDSIGS+R+ES GDSEVQRTMLELLNQLDGFEAT
Sbjct: 252 ----------REHAPSIIFMDEIDSIGSARMESSGSGDSEVQRTMLELLNQLDGFEAT 299
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/46 (93%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMAR
Sbjct: 207 TGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAR 252
>gi|313227570|emb|CBY22717.1| unnamed protein product [Oikopleura dioica]
Length = 447
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 226/307 (73%), Positives = 250/307 (81%), Gaps = 31/307 (10%)
Query: 70 MDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQ 129
MD+D ++ G YY +++ EL I +KEQN+RRL+AQRN LN++VR+LREELQLLQ
Sbjct: 49 MDIDNQVQEG-GIANYYQSQLLELNAIKNDKEQNVRRLEAQRNSLNSQVRLLREELQLLQ 107
Query: 130 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKIL 189
EQGSYVGEV+KPM K KVLVK+HPEGKFVVDID I I D+ RVAL+++SY LHKIL
Sbjct: 108 EQGSYVGEVIKPMTKNKVLVKIHPEGKFVVDIDSKIKIEDLKATTRVALKSDSYLLHKIL 167
Query: 190 PNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVL 249
PNK+DPLVSLMMVEKVPDSTYEM+GGLD QIKEIKEVIELPVKHPELF+ALGIAQPKGVL
Sbjct: 168 PNKIDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVL 227
Query: 250 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAH 309
LYGPPGTGKTLLARAVAHHT+CTFIRVSGSELVQKFIGEGSRMVRELFVMA
Sbjct: 228 LYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGSRMVRELFVMA--------- 278
Query: 310 HPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGS-GGDSEVQRTMLELL 368
REH+PSIIFMDEIDSIGSSR+ESGS GGDSEVQRTMLELL
Sbjct: 279 --------------------REHSPSIIFMDEIDSIGSSRMESGSGGGDSEVQRTMLELL 318
Query: 369 NQLDGFE 375
NQLDGFE
Sbjct: 319 NQLDGFE 325
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/68 (73%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+CTFIRVSGSELVQKFIGEGSRMVRELFVMAR S MD
Sbjct: 234 TGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGSRMVRELFVMAREHSPS----IIFMD 289
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 290 EIDSIGSS 297
>gi|354547897|emb|CCE44632.1| hypothetical protein CPAR2_404360 [Candida parapsilosis]
Length = 401
Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust.
Identities = 206/307 (67%), Positives = 246/307 (80%), Gaps = 29/307 (9%)
Query: 72 VDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQ 131
+D+ G +PY+ +I++ ++ + ++ QNLRRL+AQRN+LN VR L++EL+LLQE
Sbjct: 5 IDKPYVHEGGIRPYFEQQIQDTEIEIQQRTQNLRRLEAQRNKLNNSVRQLKDELRLLQEP 64
Query: 132 GSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPN 191
GS+VGEV+K M KKVLVK+HPEGK++V++ K+IDI +TP+ RV L+ +S+ L+KILPN
Sbjct: 65 GSFVGEVIKVMGTKKVLVKIHPEGKYIVNVTKDIDIKKLTPSIRVCLKADSHDLYKILPN 124
Query: 192 KVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLY 251
KVDPLVSLMMVEKVPDSTY+MVGGLD QIKEIKEVIELPVK+PELF +LGIAQPKGV+LY
Sbjct: 125 KVDPLVSLMMVEKVPDSTYDMVGGLDKQIKEIKEVIELPVKYPELFSSLGIAQPKGVILY 184
Query: 252 GPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHP 311
GPPGTGKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 185 GPPGTGKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMA----------- 233
Query: 312 LLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQL 371
REHAPSIIFMDEIDSIGSSR+E SGGDSEVQRTMLELLNQL
Sbjct: 234 ------------------REHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQL 275
Query: 372 DGFEATK 378
DGFE++K
Sbjct: 276 DGFESSK 282
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 53/68 (77%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMAR S MD
Sbjct: 189 TGKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPS----IIFMD 244
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 245 EIDSIGSS 252
>gi|313218802|emb|CBY42601.1| unnamed protein product [Oikopleura dioica]
Length = 350
Score = 419 bits (1078), Expect = e-115, Method: Compositional matrix adjust.
Identities = 226/307 (73%), Positives = 250/307 (81%), Gaps = 31/307 (10%)
Query: 70 MDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQ 129
MD+D ++ G YY +++ EL I +KEQN+RRL+AQRN LN++VR+LREELQLLQ
Sbjct: 49 MDIDNQVQEG-GIANYYQSQLLELNAIKNDKEQNVRRLEAQRNSLNSQVRLLREELQLLQ 107
Query: 130 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKIL 189
EQGSYVGEV+KPM K KVLVK+HPEGKFVVDID I I D+ RVAL+++SY LHKIL
Sbjct: 108 EQGSYVGEVIKPMTKNKVLVKIHPEGKFVVDIDSKIKIEDLKATTRVALKSDSYLLHKIL 167
Query: 190 PNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVL 249
PNK+DPLVSLMMVEKVPDSTYEM+GGLD QIKEIKEVIELPVKHPELF+ALGIAQPKGVL
Sbjct: 168 PNKIDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVL 227
Query: 250 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAH 309
LYGPPGTGKTLLARAVAHHT+CTFIRVSGSELVQKFIGEGSRMVRELFVMA
Sbjct: 228 LYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGSRMVRELFVMA--------- 278
Query: 310 HPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGS-GGDSEVQRTMLELL 368
REH+PSIIFMDEIDSIGSSR+ESGS GGDSEVQRTMLELL
Sbjct: 279 --------------------REHSPSIIFMDEIDSIGSSRMESGSGGGDSEVQRTMLELL 318
Query: 369 NQLDGFE 375
NQLDGFE
Sbjct: 319 NQLDGFE 325
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/68 (73%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+CTFIRVSGSELVQKFIGEGSRMVRELFVMAR S MD
Sbjct: 234 TGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGSRMVRELFVMAREHSPS----IIFMD 289
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 290 EIDSIGSS 297
>gi|384246699|gb|EIE20188.1| 26S proteasome AAA-ATPase subunit RPT6a [Coccomyxa subellipsoidea
C-169]
Length = 396
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 221/300 (73%), Positives = 247/300 (82%), Gaps = 30/300 (10%)
Query: 79 SEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEV 138
+G K YY TKIEEL+++ +K+ NLRRL+AQRNELN KVR+LREELQLLQE GSYVGEV
Sbjct: 6 GDGLKSYYKTKIEELEILARDKQHNLRRLEAQRNELNTKVRLLREELQLLQEPGSYVGEV 65
Query: 139 VKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVS 198
+K M K KVLVKVHPEGK+VVD+DK+IDI VT RVALRN+SYTLH +LP KVDPLVS
Sbjct: 66 LKVMGKNKVLVKVHPEGKYVVDLDKSIDITQVTTGARVALRNDSYTLHLLLPTKVDPLVS 125
Query: 199 LMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGK 258
LM VEKVPDSTY+M+GGLD QIKEIKEVIELP+KHPELF++LG+AQPKGVLLYGPPGTGK
Sbjct: 126 LMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGVAQPKGVLLYGPPGTGK 185
Query: 259 TLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLL 318
TLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 186 TLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMA------------------ 227
Query: 319 TILTNTIVCNFREHAPSIIFMDEIDSIGSSRIES-GSGGDSEVQRTMLELLNQLDGFEAT 377
REHAPSIIFMDE+DSIGS+R ++ G GGDSEVQRTMLELLNQLDGFEAT
Sbjct: 228 -----------REHAPSIIFMDEVDSIGSARTDNGGGGGDSEVQRTMLELLNQLDGFEAT 276
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/46 (93%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMAR
Sbjct: 183 TGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAR 228
>gi|351704431|gb|EHB07350.1| 26S protease regulatory subunit 8 [Heterocephalus glaber]
Length = 545
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 207/247 (83%), Positives = 215/247 (87%), Gaps = 29/247 (11%)
Query: 132 GSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPN 191
GSYVGEVV+ MDKKKVLVKVHPEGKFVVD+DKNIDINDVTPNCRVALRN+SYTLHKILPN
Sbjct: 209 GSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPN 268
Query: 192 KVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLY 251
KVDPLVSLMMVEKVPDSTYEM+GGLD QIKEIKEVIELPVKHPELF+ALGIAQPKGVLLY
Sbjct: 269 KVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLY 328
Query: 252 GPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHP 311
GPPGTGKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMA
Sbjct: 329 GPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMA----------- 377
Query: 312 LLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQL 371
REHAPSIIFMDEIDSIGSSR+E GSGGDSEVQRTMLELLNQL
Sbjct: 378 ------------------REHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQL 419
Query: 372 DGFEATK 378
DGFEATK
Sbjct: 420 DGFEATK 426
Score = 258 bits (658), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 141/171 (82%), Positives = 155/171 (90%), Gaps = 1/171 (0%)
Query: 69 TMDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLL 128
M+++E K+ G + YY++KIEELQLIV +K QNLRRLQAQRNELNAKVR+LREELQLL
Sbjct: 21 AMELEEG-KAGSGLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLL 79
Query: 129 QEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKI 188
QEQGSYVGEVV+ MDKKKVLVKVHPEGKFVVD+DKNIDINDVTPNCRVALRN+SYTLHKI
Sbjct: 80 QEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKI 139
Query: 189 LPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDA 239
LPNKVDPLVSLMMVEKVPDSTYEM+GGLD QIKEIKEVIELPVK + D
Sbjct: 140 LPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKQQKAGDT 190
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/68 (72%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMAR S MD
Sbjct: 333 TGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPS----IIFMD 388
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 389 EIDSIGSS 396
>gi|124806952|ref|XP_001350873.1| tat-binding protein homolog [Plasmodium falciparum 3D7]
gi|23497002|gb|AAN36553.1|AE014851_72 tat-binding protein homolog [Plasmodium falciparum 3D7]
Length = 435
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 211/298 (70%), Positives = 240/298 (80%), Gaps = 30/298 (10%)
Query: 81 GFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVK 140
G K YY KIEE + I+ +K QN +RL+AQRNELNA+VR L +E+Q L E SYVGE+VK
Sbjct: 49 GIKRYYELKIEEYESIINKKLQNKKRLEAQRNELNARVRELCDEIQYLLEAASYVGEIVK 108
Query: 141 PMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLM 200
PM K KVLVK++PEGK+VVDI ++I+I+ TPN RVAL N+SY LHKILP+KVDPLVSLM
Sbjct: 109 PMGKNKVLVKINPEGKYVVDIARHINISHCTPNTRVALYNDSYKLHKILPSKVDPLVSLM 168
Query: 201 MVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTL 260
VEKVPDSTYEMVGGLD Q+KE+KEVIELPVKHPE+F++LGI+QPKGVLLYGPPGTGKTL
Sbjct: 169 KVEKVPDSTYEMVGGLDQQVKEVKEVIELPVKHPEIFESLGISQPKGVLLYGPPGTGKTL 228
Query: 261 LARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTI 320
LARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 229 LARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMA-------------------- 268
Query: 321 LTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGS RIE G GDSEVQRTM+ELLNQLDGFE+T+
Sbjct: 269 ---------REHAPSIIFMDEIDSIGSQRIE-GEHGDSEVQRTMMELLNQLDGFESTQ 316
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 43/46 (93%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMAR
Sbjct: 224 TGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAR 269
>gi|1078797|pir||S51042 tat-binding protein homolog - malaria parasite (Plasmodium
falciparum)
Length = 435
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 211/298 (70%), Positives = 240/298 (80%), Gaps = 30/298 (10%)
Query: 81 GFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVK 140
G K YY KIEE + I+ +K QN +RL+AQRNELNA+VR L +E+Q L E SYVGE+VK
Sbjct: 49 GIKRYYELKIEEYESIINKKLQNKKRLEAQRNELNARVRELCDEIQYLLEAASYVGEIVK 108
Query: 141 PMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLM 200
PM K KVLVK++PEGK+VVDI ++I+I+ TPN RVAL N+SY LHKILP+KVDPLVSLM
Sbjct: 109 PMGKNKVLVKINPEGKYVVDIARHINISHCTPNTRVALYNDSYKLHKILPSKVDPLVSLM 168
Query: 201 MVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTL 260
VEKVPDSTYEMVGGLD Q+KE+KEVIELPVKHPE+F++LGI+QPKGVLLYGPPGTGKTL
Sbjct: 169 KVEKVPDSTYEMVGGLDQQVKEVKEVIELPVKHPEIFESLGISQPKGVLLYGPPGTGKTL 228
Query: 261 LARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTI 320
LARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 229 LARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMA-------------------- 268
Query: 321 LTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGS RIE G GDSEVQRTM+ELLNQLDGFE+T+
Sbjct: 269 ---------REHAPSIIFMDEIDSIGSQRIE-GEHGDSEVQRTMMELLNQLDGFESTQ 316
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 43/46 (93%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMAR
Sbjct: 224 TGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAR 269
>gi|290986472|ref|XP_002675948.1| 26S proteosome subunit P45 [Naegleria gruberi]
gi|284089547|gb|EFC43204.1| 26S proteosome subunit P45 [Naegleria gruberi]
Length = 407
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 213/302 (70%), Positives = 248/302 (82%), Gaps = 30/302 (9%)
Query: 78 SSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGE 137
S+ G K YY+ KI+E ++++ +K +NLRRLQAQRNELN +VR L+EELQ LQE GS+VGE
Sbjct: 16 SANGLKNYYIAKIQEKEIVLKDKIENLRRLQAQRNELNGRVRSLKEELQQLQEPGSHVGE 75
Query: 138 VVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLV 197
VVK M KKKVL+K+ EGK++VDIDK+I++ D++P RVALRN+SY LHKILPNK+DPLV
Sbjct: 76 VVKVMGKKKVLIKISQEGKYIVDIDKSIELKDLSPGVRVALRNDSYALHKILPNKIDPLV 135
Query: 198 SLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTG 257
SLM VEKVPD+TYEMVGGLD QIKE+KEVIELP+KHPELF++LGIAQPKGV++YGPPGTG
Sbjct: 136 SLMKVEKVPDATYEMVGGLDEQIKEVKEVIELPIKHPELFESLGIAQPKGVIMYGPPGTG 195
Query: 258 KTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSL 317
KTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 196 KTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMA----------------- 238
Query: 318 LTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESG-SGGDSEVQRTMLELLNQLDGFEA 376
REHAPSIIFMDEIDSIGS+R E G GGDSEVQRTMLELLNQLDGFE+
Sbjct: 239 ------------REHAPSIIFMDEIDSIGSTRTEGGKGGGDSEVQRTMLELLNQLDGFES 286
Query: 377 TK 378
T+
Sbjct: 287 TQ 288
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 43/46 (93%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMAR
Sbjct: 194 TGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAR 239
>gi|348675858|gb|EGZ15676.1| hypothetical protein PHYSODRAFT_546373 [Phytophthora sojae]
Length = 401
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 227/312 (72%), Positives = 248/312 (79%), Gaps = 33/312 (10%)
Query: 70 MDVDEAIKS---SEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQ 126
M D A+ S S G YY KIE L+L V ++ QNLRRLQAQRNELN+KVR+LREELQ
Sbjct: 1 MTADVAMASADESAGLTSYYEQKIEHLELTVRDETQNLRRLQAQRNELNSKVRLLREELQ 60
Query: 127 LLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLH 186
LLQE GSYVGEVVK M K KVLVKV+PEGK+VVD+DK IDI TPN RVALRN+SY LH
Sbjct: 61 LLQEPGSYVGEVVKQMGKSKVLVKVNPEGKYVVDVDKTIDIAKCTPNTRVALRNDSYVLH 120
Query: 187 KILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPK 246
KILP KVDPLVSLM VEKVPDSTY+M+GGLD QI+EIKEVIELP+KHPELFDALG+AQPK
Sbjct: 121 KILPTKVDPLVSLMKVEKVPDSTYDMIGGLDKQIREIKEVIELPIKHPELFDALGVAQPK 180
Query: 247 GVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLA 306
GVLLYGPPGTGKTLLARAVAHHT+CTFIRVSG+ELVQK+IGEGSRMVRELFVMA
Sbjct: 181 GVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGAELVQKYIGEGSRMVRELFVMA------ 234
Query: 307 FAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLE 366
RE +PSIIFMDEIDSIGSSR+E G GGDSEVQRTMLE
Sbjct: 235 -----------------------REASPSIIFMDEIDSIGSSRME-GGGGDSEVQRTMLE 270
Query: 367 LLNQLDGFEATK 378
LLNQLDGFE +
Sbjct: 271 LLNQLDGFEPAQ 282
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+CTFIRVSG+ELVQK+IGEGSRMVRELFVMAR S MD
Sbjct: 190 TGKTLLARAVAHHTDCTFIRVSGAELVQKYIGEGSRMVRELFVMAREASPS----IIFMD 245
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 246 EIDSIGSS 253
>gi|301122931|ref|XP_002909192.1| 26S protease regulatory subunit 8 [Phytophthora infestans T30-4]
gi|262099954|gb|EEY58006.1| 26S protease regulatory subunit 8 [Phytophthora infestans T30-4]
Length = 401
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 227/312 (72%), Positives = 248/312 (79%), Gaps = 33/312 (10%)
Query: 70 MDVDEAIKS---SEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQ 126
M D A+ S S G YY KIE L+L V ++ QNLRRLQAQRNELN+KVR+LREELQ
Sbjct: 1 MTADVAMTSADDSAGLTSYYEQKIEHLELTVRDETQNLRRLQAQRNELNSKVRLLREELQ 60
Query: 127 LLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLH 186
LLQE GSYVGEVVK M K KVLVKV+PEGK+VVD+DK IDI TPN RVALRN+SY LH
Sbjct: 61 LLQEPGSYVGEVVKQMGKSKVLVKVNPEGKYVVDVDKTIDIAKCTPNTRVALRNDSYVLH 120
Query: 187 KILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPK 246
KILP KVDPLVSLM VEKVPDSTY+M+GGLD QI+EIKEVIELP+KHPELFDALG+AQPK
Sbjct: 121 KILPTKVDPLVSLMKVEKVPDSTYDMIGGLDKQIREIKEVIELPIKHPELFDALGVAQPK 180
Query: 247 GVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLA 306
GVLLYGPPGTGKTLLARAVAHHT+CTFIRVSG+ELVQK+IGEGSRMVRELFVMA
Sbjct: 181 GVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGAELVQKYIGEGSRMVRELFVMA------ 234
Query: 307 FAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLE 366
RE +PSIIFMDEIDSIGSSR+E G GGDSEVQRTMLE
Sbjct: 235 -----------------------REASPSIIFMDEIDSIGSSRME-GGGGDSEVQRTMLE 270
Query: 367 LLNQLDGFEATK 378
LLNQLDGFE +
Sbjct: 271 LLNQLDGFEPAQ 282
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+CTFIRVSG+ELVQK+IGEGSRMVRELFVMAR S MD
Sbjct: 190 TGKTLLARAVAHHTDCTFIRVSGAELVQKYIGEGSRMVRELFVMAREASPS----IIFMD 245
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 246 EIDSIGSS 253
>gi|7504439|pir||T33633 hypothetical protein F56F11.4 - Caenorhabditis elegans
Length = 443
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 211/289 (73%), Positives = 234/289 (80%), Gaps = 30/289 (10%)
Query: 90 IEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLV 149
IE+LQ VAEK N+RRL AQ+ ELN KVR+L+EE+ L EQGS+VGEV K MDKKKVLV
Sbjct: 66 IEKLQ-TVAEKSINVRRLMAQQKELNGKVRLLKEEISHLHEQGSHVGEVCKAMDKKKVLV 124
Query: 150 KVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDST 209
K HP+GK++VD+ ++DI+ + RVALR ++Y +H++LP+KVDPLVSLMMVEKVPDST
Sbjct: 125 KNHPDGKYIVDVAASVDISTLAAGTRVALRADNYAIHEVLPSKVDPLVSLMMVEKVPDST 184
Query: 210 YEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 269
YEMVGGLD QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHT
Sbjct: 185 YEMVGGLDTQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 244
Query: 270 ECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNF 329
ECTFIRVSGSELVQKFIGEG+RMVRELFVMA
Sbjct: 245 ECTFIRVSGSELVQKFIGEGARMVRELFVMA----------------------------- 275
Query: 330 REHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGSSR+E GGDSEVQRTMLELLNQLDGFEATK
Sbjct: 276 REHAPSIIFMDEIDSIGSSRVEGSRGGDSEVQRTMLELLNQLDGFEATK 324
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/68 (73%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHTECTFIRVSGSELVQKFIGEG+RMVRELFVMAR S MD
Sbjct: 231 TGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPS----IIFMD 286
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 287 EIDSIGSS 294
>gi|146162295|ref|XP_001009196.2| 26S proteasome subunit P45 family protein [Tetrahymena thermophila]
gi|146146457|gb|EAR88951.2| 26S proteasome subunit P45 family protein [Tetrahymena thermophila
SB210]
Length = 395
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 202/303 (66%), Positives = 239/303 (78%), Gaps = 29/303 (9%)
Query: 75 AIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSY 134
++ G K +Y++KIEEL L V EK QN++RL+AQRNE N +VRML+EE LQ SY
Sbjct: 2 SVSQGAGLKAFYLSKIEELSLKVNEKSQNIKRLEAQRNEYNNQVRMLKEEFYSLQSPHSY 61
Query: 135 VGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVD 194
VGEVVKPM K KVLVK+ P+GK+VV+IDK+I I D PN RVAL+ +SY LHK+LP KVD
Sbjct: 62 VGEVVKPMGKSKVLVKISPDGKYVVNIDKSIKIEDCLPNTRVALKGDSYVLHKLLPTKVD 121
Query: 195 PLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPP 254
PLVSLM VEKVPDSTY+M+GGLD Q+KE+KEVIELP+KHPE+F++LGIAQPKGVLLYGPP
Sbjct: 122 PLVSLMKVEKVPDSTYDMIGGLDQQVKEVKEVIELPIKHPEIFESLGIAQPKGVLLYGPP 181
Query: 255 GTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLF 314
GTGKTLLARA+AHHT+CTFIRVSGSELVQK+IGEG+RMVRELFVMA
Sbjct: 182 GTGKTLLARAIAHHTDCTFIRVSGSELVQKYIGEGARMVRELFVMA-------------- 227
Query: 315 WSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGF 374
R+HAP +IF+DE+DSIG +RI+S GGDSEVQRTMLELLNQLDGF
Sbjct: 228 ---------------RQHAPCLIFIDEVDSIGGARIDSDRGGDSEVQRTMLELLNQLDGF 272
Query: 375 EAT 377
E+T
Sbjct: 273 EST 275
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/46 (89%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARA+AHHT+CTFIRVSGSELVQK+IGEG+RMVRELFVMAR
Sbjct: 183 TGKTLLARAIAHHTDCTFIRVSGSELVQKYIGEGARMVRELFVMAR 228
>gi|170581732|ref|XP_001895811.1| 26S protease regulatory subunit 8 [Brugia malayi]
gi|158597104|gb|EDP35330.1| 26S protease regulatory subunit 8, putative [Brugia malayi]
Length = 349
Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust.
Identities = 207/259 (79%), Positives = 217/259 (83%), Gaps = 29/259 (11%)
Query: 120 MLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALR 179
ML+EELQ L EQGSYVGEV K MDKKKVLVKVHPEGK+VVD+DK IDIN +T CRVALR
Sbjct: 1 MLKEELQQLHEQGSYVGEVSKAMDKKKVLVKVHPEGKYVVDLDKGIDINSITSGCRVALR 60
Query: 180 NESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDA 239
+SY LHK+LPNK+DPLVSLMMVEKVPDSTYEM+GGLD QIKEIKEVIELPVKHPELFDA
Sbjct: 61 ADSYALHKVLPNKIDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFDA 120
Query: 240 LGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVM 299
LGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEG+RMVRELFVM
Sbjct: 121 LGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVM 180
Query: 300 ASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSE 359
A REHAPSIIFMDEIDSIGSSR+E SGGDSE
Sbjct: 181 A-----------------------------REHAPSIIFMDEIDSIGSSRVEGSSGGDSE 211
Query: 360 VQRTMLELLNQLDGFEATK 378
VQRTMLELLNQLDGFEATK
Sbjct: 212 VQRTMLELLNQLDGFEATK 230
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/68 (73%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHTECTFIRVSGSELVQKFIGEG+RMVRELFVMAR S MD
Sbjct: 137 TGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPS----IIFMD 192
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 193 EIDSIGSS 200
>gi|449015639|dbj|BAM79041.1| 26S proteasome ATP-dependent regulatory subunit [Cyanidioschyzon
merolae strain 10D]
Length = 397
Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust.
Identities = 204/300 (68%), Positives = 237/300 (79%), Gaps = 30/300 (10%)
Query: 79 SEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEV 138
S G + YY TKI+E + ++ EK + +RRL+AQRNELN +VR LREELQLLQE GSYVGEV
Sbjct: 7 SSGLRLYYQTKIDEFESLIQEKAETVRRLEAQRNELNGRVRGLREELQLLQEPGSYVGEV 66
Query: 139 VKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVS 198
VKP+ K K LVKVHPEGK++VD++K + + V P RVALRN+SY LH +LP+K DPLVS
Sbjct: 67 VKPVGKNKALVKVHPEGKYIVDVEKQVAASSVKPGARVALRNDSYALHLVLPSKFDPLVS 126
Query: 199 LMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGK 258
LM VEKVPDSTY+M+GGLD QIK+IKEVIELP+KHPELFDALGIAQPKGVLLYGPPGTGK
Sbjct: 127 LMKVEKVPDSTYDMIGGLDEQIKQIKEVIELPIKHPELFDALGIAQPKGVLLYGPPGTGK 186
Query: 259 TLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLL 318
TLLARAVAHHT+CTFIRVSG ELVQK+IGEGS+++R +F +A
Sbjct: 187 TLLARAVAHHTDCTFIRVSGGELVQKYIGEGSKLIRSVFALA------------------ 228
Query: 319 TILTNTIVCNFREHAPSIIFMDEIDSIGSSRIE-SGSGGDSEVQRTMLELLNQLDGFEAT 377
REHAPSIIFMDE+DSIGS+RI+ S GGDSEVQRTMLELLNQLDGFE T
Sbjct: 229 -----------REHAPSIIFMDEVDSIGSARIDNSRGGGDSEVQRTMLELLNQLDGFEPT 277
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/46 (76%), Positives = 43/46 (93%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+CTFIRVSG ELVQK+IGEGS+++R +F +AR
Sbjct: 184 TGKTLLARAVAHHTDCTFIRVSGGELVQKYIGEGSKLIRSVFALAR 229
>gi|301090485|ref|XP_002895455.1| 26S protease regulatory subunit 8 [Phytophthora infestans T30-4]
gi|262098635|gb|EEY56687.1| 26S protease regulatory subunit 8 [Phytophthora infestans T30-4]
Length = 326
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 227/312 (72%), Positives = 248/312 (79%), Gaps = 33/312 (10%)
Query: 70 MDVDEAIKS---SEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQ 126
M D A+ S S G YY KIE L+L V ++ QNLRRLQAQRNELN+KVR+LREELQ
Sbjct: 1 MTADVAMTSADDSAGLTSYYEQKIEHLELTVRDETQNLRRLQAQRNELNSKVRLLREELQ 60
Query: 127 LLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLH 186
LLQE GSYVGEVVK M K KVLVKV+PEGK+VVD+DK IDI TPN RVALRN+SY LH
Sbjct: 61 LLQEPGSYVGEVVKQMGKSKVLVKVNPEGKYVVDVDKTIDIAKCTPNTRVALRNDSYVLH 120
Query: 187 KILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPK 246
KILP KVDPLVSLM VEKVPDSTY+M+GGLD QI+EIKEVIELP+KHPELFDALG+AQPK
Sbjct: 121 KILPTKVDPLVSLMKVEKVPDSTYDMIGGLDKQIREIKEVIELPIKHPELFDALGVAQPK 180
Query: 247 GVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLA 306
GVLLYGPPGTGKTLLARAVAHHT+CTFIRVSG+ELVQK+IGEGSRMVRELFVMA
Sbjct: 181 GVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGAELVQKYIGEGSRMVRELFVMA------ 234
Query: 307 FAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLE 366
RE +PSIIFMDEIDSIGSSR+E G GGDSEVQRTMLE
Sbjct: 235 -----------------------REASPSIIFMDEIDSIGSSRME-GGGGDSEVQRTMLE 270
Query: 367 LLNQLDGFEATK 378
LLNQLDGFE +
Sbjct: 271 LLNQLDGFEPAQ 282
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+CTFIRVSG+ELVQK+IGEGSRMVRELFVMAR S MD
Sbjct: 190 TGKTLLARAVAHHTDCTFIRVSGAELVQKYIGEGSRMVRELFVMAREASPS----IIFMD 245
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 246 EIDSIGSS 253
>gi|389586576|dbj|GAB69305.1| 26S protease regulatory subunit 8 [Plasmodium cynomolgi strain B]
Length = 409
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 210/298 (70%), Positives = 237/298 (79%), Gaps = 30/298 (10%)
Query: 81 GFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVK 140
G K YY KIEE + I+ +K QN +RL+AQRNELN +VR L +E+Q L E SYVGE+VK
Sbjct: 38 GIKTYYEMKIEEYESIINKKLQNKKRLEAQRNELNTRVRELCDEIQYLLEAASYVGEIVK 97
Query: 141 PMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLM 200
PM K KVLVK++PEGK+VVDI +I+I TPN RVAL N+SY LHKILP+KVDPLVSLM
Sbjct: 98 PMGKNKVLVKINPEGKYVVDIAHSINIAQCTPNTRVALYNDSYKLHKILPSKVDPLVSLM 157
Query: 201 MVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTL 260
VEKVPDSTYEMVGGLD Q+KE+KEVIELPVKHPE+F++LGI+QPKGVLLYGPPGTGKTL
Sbjct: 158 KVEKVPDSTYEMVGGLDQQVKEVKEVIELPVKHPEIFESLGISQPKGVLLYGPPGTGKTL 217
Query: 261 LARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTI 320
LARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 218 LARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMA-------------------- 257
Query: 321 LTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGS RIE G GDSEVQRTM+ELLNQLDGFE+T+
Sbjct: 258 ---------REHAPSIIFMDEIDSIGSQRIE-GEHGDSEVQRTMMELLNQLDGFESTQ 305
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 43/46 (93%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMAR
Sbjct: 213 TGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAR 258
>gi|2492521|sp|Q25544.1|PRS8_NAEFO RecName: Full=26S protease regulatory subunit 8 homolog; AltName:
Full=Tat-binding protein homolog
gi|1353667|gb|AAB01762.1| Tat-binding protein homolog [Naegleria fowleri]
Length = 414
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 213/299 (71%), Positives = 246/299 (82%), Gaps = 30/299 (10%)
Query: 81 GFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVK 140
G K YY+ KI+E ++++ +K +NLRRLQAQRNELN +VR L+EELQ LQE GS+VGEVVK
Sbjct: 26 GLKNYYIAKIQEKEIVLRDKIENLRRLQAQRNELNGRVRSLKEELQQLQEPGSHVGEVVK 85
Query: 141 PMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLM 200
M KKKVL+K+ EGK++VDIDK+I++ D+TP RVALRN+SY LHKILPNK+DPLVSLM
Sbjct: 86 VMGKKKVLIKISQEGKYIVDIDKSIELKDLTPGVRVALRNDSYALHKILPNKIDPLVSLM 145
Query: 201 MVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTL 260
VEKVPD+TYEMVGGLD QIKEIKEVIELP+KHPELF++LGIAQPKGV++YGPPGTGKTL
Sbjct: 146 KVEKVPDATYEMVGGLDEQIKEIKEVIELPIKHPELFESLGIAQPKGVIMYGPPGTGKTL 205
Query: 261 LARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTI 320
LARAVAHHT+CTFIRVSGSELVQK+IGEGS+MVRELFVMA
Sbjct: 206 LARAVAHHTDCTFIRVSGSELVQKYIGEGSKMVRELFVMA-------------------- 245
Query: 321 LTNTIVCNFREHAPSIIFMDEIDSIGSSRIESG-SGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGS+R E G GGDSEVQRTMLELLNQLDGFE+T+
Sbjct: 246 ---------REHAPSIIFMDEIDSIGSTRTEGGKGGGDSEVQRTMLELLNQLDGFESTQ 295
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/46 (91%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGS+MVRELFVMAR
Sbjct: 201 TGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSKMVRELFVMAR 246
>gi|301125838|ref|XP_002909803.1| 26S protease regulatory subunit 8 [Phytophthora infestans T30-4]
gi|262104053|gb|EEY62105.1| 26S protease regulatory subunit 8 [Phytophthora infestans T30-4]
Length = 326
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 227/312 (72%), Positives = 248/312 (79%), Gaps = 33/312 (10%)
Query: 70 MDVDEAIKS---SEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQ 126
M D A+ S S G YY KIE L+L V ++ QNLRRLQAQRNELN+KVR+LREELQ
Sbjct: 1 MTADVAMTSADDSAGLTSYYEQKIEHLELTVRDETQNLRRLQAQRNELNSKVRLLREELQ 60
Query: 127 LLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLH 186
LLQE GSYVGEVVK M K KVLVKV+PEGK+VVD+DK IDI TPN RVALRN+SY LH
Sbjct: 61 LLQEPGSYVGEVVKQMGKSKVLVKVNPEGKYVVDVDKTIDIAKCTPNTRVALRNDSYVLH 120
Query: 187 KILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPK 246
KILP KVDPLVSLM VEKVPDSTY+M+GGLD QI+EIKEVIELP+KHPELFDALG+AQPK
Sbjct: 121 KILPTKVDPLVSLMKVEKVPDSTYDMIGGLDKQIREIKEVIELPIKHPELFDALGVAQPK 180
Query: 247 GVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLA 306
GVLLYGPPGTGKTLLARAVAHHT+CTFIRVSG+ELVQK+IGEGSRMVRELFVMA
Sbjct: 181 GVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGAELVQKYIGEGSRMVRELFVMA------ 234
Query: 307 FAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLE 366
RE +PSIIFMDEIDSIGSSR+E G GGDSEVQRTMLE
Sbjct: 235 -----------------------REASPSIIFMDEIDSIGSSRME-GGGGDSEVQRTMLE 270
Query: 367 LLNQLDGFEATK 378
LLNQLDGFE +
Sbjct: 271 LLNQLDGFEPAQ 282
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+CTFIRVSG+ELVQK+IGEGSRMVRELFVMAR S MD
Sbjct: 190 TGKTLLARAVAHHTDCTFIRVSGAELVQKYIGEGSRMVRELFVMAREASPS----IIFMD 245
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 246 EIDSIGSS 253
>gi|449443117|ref|XP_004139327.1| PREDICTED: 26S protease regulatory subunit 8 homolog A-like
[Cucumis sativus]
Length = 418
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 223/310 (71%), Positives = 250/310 (80%), Gaps = 30/310 (9%)
Query: 69 TMDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLL 128
T A K EG + YY+ I++LQL + K NL RL+AQRNELN++VR+LREELQLL
Sbjct: 18 TCSAKPATKHGEGLRHYYLQHIQDLQLQLRLKTHNLNRLEAQRNELNSRVRLLREELQLL 77
Query: 129 QEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKI 188
QE GSYVGEVVK M K KVLVKVHPEGK+VVDIDK+IDI +TP+ RVALRN+SY LH +
Sbjct: 78 QEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYVLHLV 137
Query: 189 LPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGV 248
LP+KVDPLV+LM VEKVPDSTY+M+GGLD QIKEIKEVIELP+KHPELF++LGIAQPKGV
Sbjct: 138 LPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGV 197
Query: 249 LLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFA 308
LLYGPPGTGKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 198 LLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMA-------- 249
Query: 309 HHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGG-DSEVQRTMLEL 367
REHAPSIIFMDEIDSIGS+R+ESGSG DSEVQRTMLEL
Sbjct: 250 ---------------------REHAPSIIFMDEIDSIGSARMESGSGNSDSEVQRTMLEL 288
Query: 368 LNQLDGFEAT 377
LNQLDGFEA+
Sbjct: 289 LNQLDGFEAS 298
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 43/46 (93%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMAR
Sbjct: 205 TGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAR 250
>gi|254586757|ref|XP_002498946.1| ZYRO0G22330p [Zygosaccharomyces rouxii]
gi|238941840|emb|CAR30013.1| ZYRO0G22330p [Zygosaccharomyces rouxii]
Length = 405
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 205/298 (68%), Positives = 238/298 (79%), Gaps = 29/298 (9%)
Query: 81 GFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVK 140
G KPY+ KI+E ++ + K +NLRRL+AQRN LN KVR +++EL+LLQE GSYVGEV+K
Sbjct: 18 GIKPYFEQKIQETEINIRAKTENLRRLEAQRNALNDKVRFIKDELRLLQEPGSYVGEVIK 77
Query: 141 PMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLM 200
+ KKVLVKV PEGK++VDI K+I+I D+ P+ RV L+++SYTLHKIL NK DPLVSLM
Sbjct: 78 VVSDKKVLVKVQPEGKYIVDISKDINIKDLKPSQRVCLKSDSYTLHKILENKADPLVSLM 137
Query: 201 MVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTL 260
MVEKVPDSTY+M+GGL QIKEIKEVIELPVKHPELF++LGI QPKGV+LYGPPGTGKTL
Sbjct: 138 MVEKVPDSTYDMLGGLTKQIKEIKEVIELPVKHPELFESLGITQPKGVILYGPPGTGKTL 197
Query: 261 LARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTI 320
LARAVAHHT+C FIRVSG+ELVQK+IGEGSRMVRELFVMA
Sbjct: 198 LARAVAHHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMA-------------------- 237
Query: 321 LTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
RE+APSIIFMDEIDSIGSSR+E GGDSEVQRTMLELLNQLDGFE +K
Sbjct: 238 ---------RENAPSIIFMDEIDSIGSSRVEGSGGGDSEVQRTMLELLNQLDGFETSK 286
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 53/68 (77%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+C FIRVSG+ELVQK+IGEGSRMVRELFVMAR S MD
Sbjct: 193 TGKTLLARAVAHHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMARENAPS----IIFMD 248
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 249 EIDSIGSS 256
>gi|339245313|ref|XP_003378582.1| 26S protease regulatory subunit 8 [Trichinella spiralis]
gi|316972496|gb|EFV56173.1| 26S protease regulatory subunit 8 [Trichinella spiralis]
Length = 349
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 208/259 (80%), Positives = 218/259 (84%), Gaps = 29/259 (11%)
Query: 120 MLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALR 179
ML+EEL LL EQGSYVGEVV+ MDKKKVLVKVHPEGK+VVD+DKNIDI +TPN RVALR
Sbjct: 1 MLKEELSLLHEQGSYVGEVVRVMDKKKVLVKVHPEGKYVVDVDKNIDIGKITPNSRVALR 60
Query: 180 NESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDA 239
+SY LHKILPNKVDPLVSLMMVEKVPDSTYEM+GGLD QIKEIKEVIELPVKHPELF+A
Sbjct: 61 ADSYVLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEA 120
Query: 240 LGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVM 299
LGI QPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEG+RMVRELFVM
Sbjct: 121 LGIEQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVM 180
Query: 300 ASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSE 359
A REHAPSIIFMDEIDSIGSSRI+S SG DSE
Sbjct: 181 A-----------------------------REHAPSIIFMDEIDSIGSSRIDSNSGSDSE 211
Query: 360 VQRTMLELLNQLDGFEATK 378
VQRTMLELLNQLDGFEATK
Sbjct: 212 VQRTMLELLNQLDGFEATK 230
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/68 (73%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHTECTFIRVSGSELVQKFIGEG+RMVRELFVMAR S MD
Sbjct: 137 TGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPS----IIFMD 192
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 193 EIDSIGSS 200
>gi|449509455|ref|XP_004163594.1| PREDICTED: 26S protease regulatory subunit 8 homolog A-like
[Cucumis sativus]
Length = 418
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 223/310 (71%), Positives = 250/310 (80%), Gaps = 30/310 (9%)
Query: 69 TMDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLL 128
T A K EG + YY+ I++LQL + K NL RL+AQRNELN++VR+LREELQLL
Sbjct: 18 TCSAKPATKHGEGLRHYYLQHIQDLQLQLRLKTHNLNRLEAQRNELNSRVRLLREELQLL 77
Query: 129 QEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKI 188
QE GSYVGEVVK M K KVLVKVHPEGK+VVDIDK+IDI +TP+ RVALRN+SY LH +
Sbjct: 78 QEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYVLHLV 137
Query: 189 LPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGV 248
LP+KVDPLV+LM VEKVPDSTY+M+GGLD QIKEIKEVIELP+KHPELF++LGIAQPKGV
Sbjct: 138 LPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGV 197
Query: 249 LLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFA 308
LLYGPPGTGKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 198 LLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMA-------- 249
Query: 309 HHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGG-DSEVQRTMLEL 367
REHAPSIIFMDEIDSIGS+R+ESGSG DSEVQRTMLEL
Sbjct: 250 ---------------------REHAPSIIFMDEIDSIGSARMESGSGNSDSEVQRTMLEL 288
Query: 368 LNQLDGFEAT 377
LNQLDGFEA+
Sbjct: 289 LNQLDGFEAS 298
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 43/46 (93%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMAR
Sbjct: 205 TGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAR 250
>gi|156095959|ref|XP_001614014.1| 26S protease regulatory subunit 8 [Plasmodium vivax Sal-1]
gi|148802888|gb|EDL44287.1| 26S protease regulatory subunit 8, putative [Plasmodium vivax]
Length = 424
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 209/298 (70%), Positives = 237/298 (79%), Gaps = 30/298 (10%)
Query: 81 GFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVK 140
G K YY KIEE + I+ +K QN +RL+AQRNELN +VR L +E+Q L E SYVGE+VK
Sbjct: 38 GIKTYYEMKIEEYESIINKKLQNKKRLEAQRNELNTRVRELCDEIQYLLEAASYVGEIVK 97
Query: 141 PMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLM 200
PM K KVLVK++PEGK+VVDI +++I TPN RVAL N+SY LHKILP+KVDPLVSLM
Sbjct: 98 PMGKNKVLVKINPEGKYVVDISHSVNIAQCTPNTRVALYNDSYKLHKILPSKVDPLVSLM 157
Query: 201 MVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTL 260
VEKVPDSTYEMVGGLD Q+KE+KEVIELPVKHPE+F++LGI+QPKGVLLYGPPGTGKTL
Sbjct: 158 KVEKVPDSTYEMVGGLDQQVKEVKEVIELPVKHPEIFESLGISQPKGVLLYGPPGTGKTL 217
Query: 261 LARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTI 320
LARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 218 LARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMA-------------------- 257
Query: 321 LTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGS RIE G GDSEVQRTM+ELLNQLDGFE+T+
Sbjct: 258 ---------REHAPSIIFMDEIDSIGSQRIE-GEHGDSEVQRTMMELLNQLDGFESTQ 305
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 43/46 (93%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMAR
Sbjct: 213 TGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAR 258
>gi|380796069|gb|AFE69910.1| 26S protease regulatory subunit 8 isoform 1, partial [Macaca
mulatta]
Length = 354
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 206/246 (83%), Positives = 214/246 (86%), Gaps = 29/246 (11%)
Query: 133 SYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNK 192
SYVGEVV+ MDKKKVLVKVHPEGKFVVD+DKNIDINDVTPNCRVALRN+SYTLHKILPNK
Sbjct: 19 SYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNK 78
Query: 193 VDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYG 252
VDPLVSLMMVEKVPDSTYEM+GGLD QIKEIKEVIELPVKHPELF+ALGIAQPKGVLLYG
Sbjct: 79 VDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYG 138
Query: 253 PPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPL 312
PPGTGKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMA
Sbjct: 139 PPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMA------------ 186
Query: 313 LFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLD 372
REHAPSIIFMDEIDSIGSSR+E GSGGDSEVQRTMLELLNQLD
Sbjct: 187 -----------------REHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLD 229
Query: 373 GFEATK 378
GFEATK
Sbjct: 230 GFEATK 235
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 49/68 (72%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMAR S MD
Sbjct: 142 TGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPS----IIFMD 197
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 198 EIDSIGSS 205
>gi|303286279|ref|XP_003062429.1| proteasomal ATPase [Micromonas pusilla CCMP1545]
gi|226455946|gb|EEH53248.1| proteasomal ATPase [Micromonas pusilla CCMP1545]
Length = 402
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 209/309 (67%), Positives = 243/309 (78%), Gaps = 34/309 (11%)
Query: 72 VDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQ 131
V+ + + +G + YY KIEE ++ V +K QNLRRL+AQRNELN KVRMLREE+QLLQE
Sbjct: 5 VETSQPAKDGLRGYYSAKIEEYEIAVRDKTQNLRRLEAQRNELNHKVRMLREEIQLLQEP 64
Query: 132 GSYVGEVVKPMDKKKVLVK---VHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKI 188
GSYVGEVVK M K KVL K VHPEGK+VVDI K+IDIN +T RVAL+N+SY LH I
Sbjct: 65 GSYVGEVVKVMGKTKVLCKARLVHPEGKYVVDIAKDIDINTLTTGARVALKNDSYALHLI 124
Query: 189 LPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGV 248
LP+ VDPLVSLM VEKVPDST++M+GGLD Q+KEIKEV+ELP+KHPELF++LGIAQPKGV
Sbjct: 125 LPSLVDPLVSLMKVEKVPDSTFDMIGGLDEQVKEIKEVVELPIKHPELFESLGIAQPKGV 184
Query: 249 LLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFA 308
+LYGPPGTGKTLLARAVAHHT+C FIRVSGSELVQK+IGEG+RMVRELFVMA
Sbjct: 185 ILYGPPGTGKTLLARAVAHHTDCCFIRVSGSELVQKYIGEGARMVRELFVMA-------- 236
Query: 309 HHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELL 368
RE+AP+I+FMDE+DSIGS+R GGDSEVQRTMLELL
Sbjct: 237 ---------------------RENAPAILFMDEVDSIGSAR--GSGGGDSEVQRTMLELL 273
Query: 369 NQLDGFEAT 377
NQLDGFEA+
Sbjct: 274 NQLDGFEAS 282
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/70 (65%), Positives = 54/70 (77%), Gaps = 4/70 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEG+RMVRELFVMAR + MD
Sbjct: 192 TGKTLLARAVAHHTDCCFIRVSGSELVQKYIGEGARMVRELFVMARENAPA----ILFMD 247
Query: 72 VDEAIKSSEG 81
++I S+ G
Sbjct: 248 EVDSIGSARG 257
>gi|221061983|ref|XP_002262561.1| tat-binding protein homolog [Plasmodium knowlesi strain H]
gi|193811711|emb|CAQ42439.1| tat-binding protein homolog, putative [Plasmodium knowlesi strain
H]
Length = 424
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 210/298 (70%), Positives = 237/298 (79%), Gaps = 30/298 (10%)
Query: 81 GFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVK 140
G K YY KIEE + I+ +K QN +RL+AQRNELN +VR L +E+Q L E SYVGE+VK
Sbjct: 38 GIKTYYEMKIEEYESIINKKLQNKKRLEAQRNELNTRVRELCDEIQYLLEAASYVGEIVK 97
Query: 141 PMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLM 200
PM K KVLVK++PEGK+VVDI +I+I TPN RVAL N+SY LHKILP+KVDPLVSLM
Sbjct: 98 PMGKNKVLVKINPEGKYVVDIAHSINIAQCTPNTRVALYNDSYKLHKILPSKVDPLVSLM 157
Query: 201 MVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTL 260
VEKVPDSTYEMVGGL+ Q+KE+KEVIELPVKHPE+F++LGI+QPKGVLLYGPPGTGKTL
Sbjct: 158 KVEKVPDSTYEMVGGLEQQVKEVKEVIELPVKHPEIFESLGISQPKGVLLYGPPGTGKTL 217
Query: 261 LARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTI 320
LARAVAHHTECTFIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 218 LARAVAHHTECTFIRVSGSELVQKYIGEGSRMVRELFVMA-------------------- 257
Query: 321 LTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGS RIE G GDSEVQRTM+ELLNQLDGFE+T+
Sbjct: 258 ---------REHAPSIIFMDEIDSIGSQRIE-GEHGDSEVQRTMMELLNQLDGFESTQ 305
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/46 (95%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHTECTFIRVSGSELVQK+IGEGSRMVRELFVMAR
Sbjct: 213 TGKTLLARAVAHHTECTFIRVSGSELVQKYIGEGSRMVRELFVMAR 258
>gi|50302545|ref|XP_451208.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49640339|emb|CAH02796.1| KLLA0A04752p [Kluyveromyces lactis]
Length = 404
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 205/298 (68%), Positives = 239/298 (80%), Gaps = 29/298 (9%)
Query: 81 GFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVK 140
G KP++ KI+E +L + EK NLRRL+AQRN LN KVR +++EL+LLQE GSYVGEV+K
Sbjct: 17 GIKPFFDQKIQESELRIREKTSNLRRLEAQRNALNDKVRFIKDELRLLQESGSYVGEVLK 76
Query: 141 PMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLM 200
+ +KKVLVKV PEGK++VD+ K+I++ D+ + RV L+++SY LHK+L NKVDPLVSLM
Sbjct: 77 VISEKKVLVKVQPEGKYIVDVAKDINVKDLKVSQRVCLKSDSYQLHKVLENKVDPLVSLM 136
Query: 201 MVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTL 260
MVEKVPDSTY+MVGGL QIKEIKEVIELPVKHPELF++LGIAQPKGV+LYGPPGTGKTL
Sbjct: 137 MVEKVPDSTYDMVGGLTKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTL 196
Query: 261 LARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTI 320
LARAVAHHT+C FIRVSG+ELVQK+IGEGSRMVRELFVMA
Sbjct: 197 LARAVAHHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMA-------------------- 236
Query: 321 LTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGSSR+E GGDSEVQRTMLELLNQLDGFE +K
Sbjct: 237 ---------REHAPSIIFMDEIDSIGSSRVEGSGGGDSEVQRTMLELLNQLDGFETSK 285
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 53/68 (77%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+C FIRVSG+ELVQK+IGEGSRMVRELFVMAR S MD
Sbjct: 192 TGKTLLARAVAHHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMAREHAPS----IIFMD 247
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 248 EIDSIGSS 255
>gi|255075347|ref|XP_002501348.1| proteasomal ATPase [Micromonas sp. RCC299]
gi|226516612|gb|ACO62606.1| proteasomal ATPase [Micromonas sp. RCC299]
Length = 399
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 205/298 (68%), Positives = 240/298 (80%), Gaps = 31/298 (10%)
Query: 80 EGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVV 139
+G + YY KIEE ++ V +K QNLRRL+AQRNELN KVRMLREE+QLLQE GSYVGEVV
Sbjct: 13 DGLRSYYRAKIEEYEVAVRDKTQNLRRLEAQRNELNHKVRMLREEIQLLQEPGSYVGEVV 72
Query: 140 KPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSL 199
K M K KVLVKVHPEGK+VVD+ K+I+I ++ RVAL+N+SYTLH +LP+ VDPLVSL
Sbjct: 73 KVMGKTKVLVKVHPEGKYVVDVAKDIEIEKLSTGQRVALKNDSYTLHLVLPSLVDPLVSL 132
Query: 200 MMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKT 259
M VEKVPDST++M+GGLD Q+KEIKEV+ELP+KHPELF++LGIAQPKGV+LYGPPGTGKT
Sbjct: 133 MKVEKVPDSTFDMIGGLDQQVKEIKEVVELPIKHPELFESLGIAQPKGVILYGPPGTGKT 192
Query: 260 LLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLT 319
LLARAVAHHT+C FIRVSGSELVQK+IGEG+RMVRELFVMA
Sbjct: 193 LLARAVAHHTDCCFIRVSGSELVQKYIGEGARMVRELFVMA------------------- 233
Query: 320 ILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEAT 377
RE+AP+I+FMDE+DSIGS+R GGDSEVQRTMLELLNQLDGFEA+
Sbjct: 234 ----------RENAPAILFMDEVDSIGSAR--GSGGGDSEVQRTMLELLNQLDGFEAS 279
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/70 (65%), Positives = 54/70 (77%), Gaps = 4/70 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEG+RMVRELFVMAR + MD
Sbjct: 189 TGKTLLARAVAHHTDCCFIRVSGSELVQKYIGEGARMVRELFVMARENAPA----ILFMD 244
Query: 72 VDEAIKSSEG 81
++I S+ G
Sbjct: 245 EVDSIGSARG 254
>gi|384497030|gb|EIE87521.1| 26S protease regulatory subunit 8 [Rhizopus delemar RA 99-880]
Length = 392
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 231/299 (77%), Positives = 249/299 (83%), Gaps = 29/299 (9%)
Query: 80 EGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVV 139
EG K YY KIE+ +LI+ EK Q+LRRL+AQRN LNAKVR+L+EELQLLQE GSYVGEVV
Sbjct: 4 EGIKSYYQAKIEDCELILNEKSQDLRRLEAQRNALNAKVRLLKEELQLLQEPGSYVGEVV 63
Query: 140 KPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSL 199
K M KKKVLVKVHPEGKFVVDI +IDI +TP RVALRN+SY LHK+LPNK+DPLVSL
Sbjct: 64 KVMGKKKVLVKVHPEGKFVVDIASDIDIAQLTPTTRVALRNDSYQLHKVLPNKIDPLVSL 123
Query: 200 MMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKT 259
MMVEKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELF++LGIAQPKGVLLYGPPGTGKT
Sbjct: 124 MMVEKVPDSTYEMVGGLDQQIKEIKEVIELPVKHPELFESLGIAQPKGVLLYGPPGTGKT 183
Query: 260 LLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLT 319
LLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 184 LLARAVAHHTDCRFIRVSGSELVQKYIGEGSRMVRELFVMA------------------- 224
Query: 320 ILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGS+R+ESG GGDSEVQRTMLELLNQLDGFEATK
Sbjct: 225 ----------REHAPSIIFMDEIDSIGSARMESGGGGDSEVQRTMLELLNQLDGFEATK 273
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/46 (91%), Positives = 45/46 (97%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMAR
Sbjct: 180 TGKTLLARAVAHHTDCRFIRVSGSELVQKYIGEGSRMVRELFVMAR 225
>gi|401842796|gb|EJT44848.1| RPT6-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 405
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 203/298 (68%), Positives = 237/298 (79%), Gaps = 29/298 (9%)
Query: 81 GFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVK 140
G KPY+ KI+E +L + K +N+RRL+AQRN LN KVR +++EL+LLQE GSYVGEV+K
Sbjct: 18 GIKPYFEQKIQETELKIRSKTENVRRLEAQRNALNDKVRFIKDELRLLQEPGSYVGEVIK 77
Query: 141 PMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLM 200
+ KKVLVKV PEGK++VD+ K+I++ D+ + RV LR++SY LHK+L NK DPLVSLM
Sbjct: 78 IVSDKKVLVKVQPEGKYIVDVAKDINVKDLKASQRVCLRSDSYMLHKVLENKADPLVSLM 137
Query: 201 MVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTL 260
MVEKVPDSTY+MVGGL QIKEIKEVIELPVKHPELF++LGIAQPKGV+LYGPPGTGKTL
Sbjct: 138 MVEKVPDSTYDMVGGLTKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTL 197
Query: 261 LARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTI 320
LARAVAHHT+C FIRVSG+ELVQK+IGEGSRMVRELFVMA
Sbjct: 198 LARAVAHHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMA-------------------- 237
Query: 321 LTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGS+R+E GGDSEVQRTMLELLNQLDGFE +K
Sbjct: 238 ---------REHAPSIIFMDEIDSIGSTRVEGSGGGDSEVQRTMLELLNQLDGFETSK 286
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 41/46 (89%), Positives = 45/46 (97%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+C FIRVSG+ELVQK+IGEGSRMVRELFVMAR
Sbjct: 193 TGKTLLARAVAHHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMAR 238
>gi|256271329|gb|EEU06395.1| Rpt6p [Saccharomyces cerevisiae JAY291]
Length = 405
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 203/298 (68%), Positives = 237/298 (79%), Gaps = 29/298 (9%)
Query: 81 GFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVK 140
G KPY+ KI+E +L + K +N+RRL+AQRN LN KVR +++EL+LLQE GSYVGEV+K
Sbjct: 18 GIKPYFEQKIQETELKIRSKTENVRRLEAQRNALNDKVRFIKDELRLLQEPGSYVGEVIK 77
Query: 141 PMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLM 200
+ KKVLVKV PEGK++VD+ K+I++ D+ + RV LR++SY LHK+L NK DPLVSLM
Sbjct: 78 IVSDKKVLVKVQPEGKYIVDVAKDINVKDLKASQRVCLRSDSYMLHKVLENKADPLVSLM 137
Query: 201 MVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTL 260
MVEKVPDSTY+MVGGL QIKEIKEVIELPVKHPELF++LGIAQPKGV+LYGPPGTGKTL
Sbjct: 138 MVEKVPDSTYDMVGGLTKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTL 197
Query: 261 LARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTI 320
LARAVAHHT+C FIRVSG+ELVQK+IGEGSRMVRELFVMA
Sbjct: 198 LARAVAHHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMA-------------------- 237
Query: 321 LTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGS+R+E GGDSEVQRTMLELLNQLDGFE +K
Sbjct: 238 ---------REHAPSIIFMDEIDSIGSTRVEGSGGGDSEVQRTMLELLNQLDGFETSK 286
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 41/46 (89%), Positives = 45/46 (97%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+C FIRVSG+ELVQK+IGEGSRMVRELFVMAR
Sbjct: 193 TGKTLLARAVAHHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMAR 238
>gi|6321390|ref|NP_011467.1| proteasome regulatory particle base subunit RPT6 [Saccharomyces
cerevisiae S288c]
gi|1709801|sp|Q01939.4|PRS8_YEAST RecName: Full=26S protease regulatory subunit 8 homolog; AltName:
Full=Protein CIM3; AltName: Full=Protein SUG1; AltName:
Full=Tat-binding protein TBY1
gi|403071970|pdb|4B4T|J Chain J, Near-Atomic Resolution Structural Model Of The Yeast 26s
Proteasome
gi|172878|gb|AAA35138.1| Tat-binding protein [Saccharomyces cerevisiae]
gi|1322539|emb|CAA96750.1| SUG1 [Saccharomyces cerevisiae]
gi|51013721|gb|AAT93154.1| YGL048C [Saccharomyces cerevisiae]
gi|151943244|gb|EDN61557.1| ATPase [Saccharomyces cerevisiae YJM789]
gi|190407011|gb|EDV10278.1| 26S protease regulatory subunit 8 [Saccharomyces cerevisiae
RM11-1a]
gi|207345311|gb|EDZ72174.1| YGL048Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|259146455|emb|CAY79712.1| Rpt6p [Saccharomyces cerevisiae EC1118]
gi|285812153|tpg|DAA08053.1| TPA: proteasome regulatory particle base subunit RPT6
[Saccharomyces cerevisiae S288c]
gi|323309082|gb|EGA62310.1| Rpt6p [Saccharomyces cerevisiae FostersO]
gi|323333434|gb|EGA74828.1| Rpt6p [Saccharomyces cerevisiae AWRI796]
gi|323348524|gb|EGA82768.1| Rpt6p [Saccharomyces cerevisiae Lalvin QA23]
gi|323354945|gb|EGA86776.1| Rpt6p [Saccharomyces cerevisiae VL3]
gi|349578175|dbj|GAA23341.1| K7_Rpt6p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365765579|gb|EHN07086.1| Rpt6p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392299212|gb|EIW10306.1| Rpt6p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 405
Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust.
Identities = 203/298 (68%), Positives = 237/298 (79%), Gaps = 29/298 (9%)
Query: 81 GFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVK 140
G KPY+ KI+E +L + K +N+RRL+AQRN LN KVR +++EL+LLQE GSYVGEV+K
Sbjct: 18 GIKPYFEQKIQETELKIRSKTENVRRLEAQRNALNDKVRFIKDELRLLQEPGSYVGEVIK 77
Query: 141 PMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLM 200
+ KKVLVKV PEGK++VD+ K+I++ D+ + RV LR++SY LHK+L NK DPLVSLM
Sbjct: 78 IVSDKKVLVKVQPEGKYIVDVAKDINVKDLKASQRVCLRSDSYMLHKVLENKADPLVSLM 137
Query: 201 MVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTL 260
MVEKVPDSTY+MVGGL QIKEIKEVIELPVKHPELF++LGIAQPKGV+LYGPPGTGKTL
Sbjct: 138 MVEKVPDSTYDMVGGLTKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTL 197
Query: 261 LARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTI 320
LARAVAHHT+C FIRVSG+ELVQK+IGEGSRMVRELFVMA
Sbjct: 198 LARAVAHHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMA-------------------- 237
Query: 321 LTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGS+R+E GGDSEVQRTMLELLNQLDGFE +K
Sbjct: 238 ---------REHAPSIIFMDEIDSIGSTRVEGSGGGDSEVQRTMLELLNQLDGFETSK 286
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 41/46 (89%), Positives = 45/46 (97%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+C FIRVSG+ELVQK+IGEGSRMVRELFVMAR
Sbjct: 193 TGKTLLARAVAHHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMAR 238
>gi|401625774|gb|EJS43767.1| rpt6p [Saccharomyces arboricola H-6]
Length = 405
Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust.
Identities = 202/298 (67%), Positives = 237/298 (79%), Gaps = 29/298 (9%)
Query: 81 GFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVK 140
G KPY+ KI+E ++ + K +N+RRL+AQRN LN KVR +++EL+LLQE GSYVGEV+K
Sbjct: 18 GIKPYFEQKIQETEIKIRSKTENVRRLEAQRNALNDKVRFIKDELRLLQEPGSYVGEVIK 77
Query: 141 PMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLM 200
+ KKVLVKV PEGK++VD+ K+I++ D+ + RV LR++SY LHK+L NK DPLVSLM
Sbjct: 78 IVSDKKVLVKVQPEGKYIVDVAKDINVKDLKASQRVCLRSDSYMLHKVLENKADPLVSLM 137
Query: 201 MVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTL 260
MVEKVPDSTY+MVGGL QIKEIKEVIELPVKHPELF++LGIAQPKGV+LYGPPGTGKTL
Sbjct: 138 MVEKVPDSTYDMVGGLTKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTL 197
Query: 261 LARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTI 320
LARAVAHHT+C FIRVSG+ELVQK+IGEGSRMVRELFVMA
Sbjct: 198 LARAVAHHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMA-------------------- 237
Query: 321 LTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGS+R+E GGDSEVQRTMLELLNQLDGFE +K
Sbjct: 238 ---------REHAPSIIFMDEIDSIGSTRVEGSGGGDSEVQRTMLELLNQLDGFETSK 286
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 41/46 (89%), Positives = 45/46 (97%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+C FIRVSG+ELVQK+IGEGSRMVRELFVMAR
Sbjct: 193 TGKTLLARAVAHHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMAR 238
>gi|237831913|ref|XP_002365254.1| 26S protease regulatory subunit 8, putative [Toxoplasma gondii
ME49]
gi|211962918|gb|EEA98113.1| 26S protease regulatory subunit 8, putative [Toxoplasma gondii
ME49]
gi|221486895|gb|EEE25141.1| 26S protease regulatory subunit, putative [Toxoplasma gondii GT1]
gi|221506585|gb|EEE32202.1| 26S protease regulatory subunit, putative [Toxoplasma gondii VEG]
Length = 409
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 209/300 (69%), Positives = 238/300 (79%), Gaps = 30/300 (10%)
Query: 79 SEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEV 138
S G + YY KI+ LQ ++ K Q+ RRL+AQRNELNAKVR LR+ELQ+L E GSYVGEV
Sbjct: 21 SSGLQTYYEQKIDNLQRVINAKTQDKRRLEAQRNELNAKVRELRDELQVLLEPGSYVGEV 80
Query: 139 VKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVS 198
VK M + KVLVKV+PEGK+VVD+ KNID++ T N RVAL N+SY LHKILP K+DPLVS
Sbjct: 81 VKVMGRNKVLVKVNPEGKYVVDVAKNIDLSQCTVNTRVALLNDSYRLHKILPTKIDPLVS 140
Query: 199 LMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGK 258
LM VEKVP+STYEMVGGL+ Q+KE+KEVIELP+KHPELF++LGI+QPKGVLLYGPPGTGK
Sbjct: 141 LMKVEKVPESTYEMVGGLEQQVKEVKEVIELPIKHPELFESLGISQPKGVLLYGPPGTGK 200
Query: 259 TLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLL 318
TLLARAVAHHT+CTFIRVSG ELVQK+IGEGSRMVRELFVMA
Sbjct: 201 TLLARAVAHHTDCTFIRVSGGELVQKYIGEGSRMVRELFVMA------------------ 242
Query: 319 TILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGS R E G GDSEVQRTM+ELLNQLDGFE+T+
Sbjct: 243 -----------REHAPSIIFMDEIDSIGSQRTE-GEHGDSEVQRTMMELLNQLDGFESTQ 290
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/46 (91%), Positives = 45/46 (97%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+CTFIRVSG ELVQK+IGEGSRMVRELFVMAR
Sbjct: 198 TGKTLLARAVAHHTDCTFIRVSGGELVQKYIGEGSRMVRELFVMAR 243
>gi|365760725|gb|EHN02423.1| Rpt6p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 332
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 203/298 (68%), Positives = 237/298 (79%), Gaps = 29/298 (9%)
Query: 81 GFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVK 140
G KPY+ KI+E +L + K +N+RRL+AQRN LN KVR +++EL+LLQE GSYVGEV+K
Sbjct: 18 GIKPYFEQKIQETELKIRSKTENVRRLEAQRNALNDKVRFIKDELRLLQEPGSYVGEVIK 77
Query: 141 PMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLM 200
+ KKVLVKV PEGK++VD+ K+I++ D+ + RV LR++SY LHK+L NK DPLVSLM
Sbjct: 78 IVSDKKVLVKVQPEGKYIVDVAKDINVKDLKASQRVCLRSDSYMLHKVLENKADPLVSLM 137
Query: 201 MVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTL 260
MVEKVPDSTY+MVGGL QIKEIKEVIELPVKHPELF++LGIAQPKGV+LYGPPGTGKTL
Sbjct: 138 MVEKVPDSTYDMVGGLTKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTL 197
Query: 261 LARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTI 320
LARAVAHHT+C FIRVSG+ELVQK+IGEGSRMVRELFVMA
Sbjct: 198 LARAVAHHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMA-------------------- 237
Query: 321 LTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGS+R+E GGDSEVQRTMLELLNQLDGFE +K
Sbjct: 238 ---------REHAPSIIFMDEIDSIGSTRVEGSGGGDSEVQRTMLELLNQLDGFETSK 286
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 41/46 (89%), Positives = 45/46 (97%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+C FIRVSG+ELVQK+IGEGSRMVRELFVMAR
Sbjct: 193 TGKTLLARAVAHHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMAR 238
>gi|410080922|ref|XP_003958041.1| hypothetical protein KAFR_0F03100 [Kazachstania africana CBS 2517]
gi|372464628|emb|CCF58906.1| hypothetical protein KAFR_0F03100 [Kazachstania africana CBS 2517]
Length = 405
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 209/319 (65%), Positives = 246/319 (77%), Gaps = 35/319 (10%)
Query: 61 SSRGTEFFTMDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRM 120
+S + +M E+ G KPY+ KI+E +L + K NL+RL+AQRN LN +VR
Sbjct: 2 TSAAVQILSMQSHES-----GIKPYFEQKIQETELKIRAKTDNLKRLEAQRNSLNERVRF 56
Query: 121 LREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRN 180
+++EL+LLQE GSYVGEV+K + KKVLVKV PEGK++VD+ K+I++ D+ + RV L++
Sbjct: 57 IKDELRLLQEPGSYVGEVLKVVSDKKVLVKVQPEGKYIVDVAKDINVKDLKVSQRVCLKS 116
Query: 181 ESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDAL 240
+SY LHKIL NK DPLVSLMMVEKVPDSTY+MVGGL QIKEIKEVIELPVKHPELF++L
Sbjct: 117 DSYMLHKILENKADPLVSLMMVEKVPDSTYDMVGGLTKQIKEIKEVIELPVKHPELFESL 176
Query: 241 GIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
GIAQPKGV+LYGPPGTGKTLLARAVAHHT+C FIRVSG+ELVQK+IGEGSRMVRELFVMA
Sbjct: 177 GIAQPKGVILYGPPGTGKTLLARAVAHHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMA 236
Query: 301 SLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGS-GGDSE 359
REHAPSIIFMDEIDSIGSSR+ESGS GGDSE
Sbjct: 237 -----------------------------REHAPSIIFMDEIDSIGSSRVESGSGGGDSE 267
Query: 360 VQRTMLELLNQLDGFEATK 378
VQRTMLELLNQLDGFE +K
Sbjct: 268 VQRTMLELLNQLDGFETSK 286
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 53/68 (77%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+C FIRVSG+ELVQK+IGEGSRMVRELFVMAR S MD
Sbjct: 192 TGKTLLARAVAHHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMAREHAPS----IIFMD 247
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 248 EIDSIGSS 255
>gi|4591|emb|CAA47023.1| sug1 [Saccharomyces cerevisiae]
gi|1195528|gb|AAB35417.1| 26S protease subunit S8=SUG1 homolog [human, erythrocytes, Peptide,
405 aa]
Length = 405
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 203/298 (68%), Positives = 236/298 (79%), Gaps = 29/298 (9%)
Query: 81 GFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVK 140
G KPY+ KI+E +L + K +N RRL+AQRN LN KVR +++EL+LLQE GSYVGEV+K
Sbjct: 18 GIKPYFEQKIQETELKIRSKTENGRRLEAQRNALNDKVRFIKDELRLLQEPGSYVGEVIK 77
Query: 141 PMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLM 200
+ KKVLVKV PEGK++VD+ K+I++ D+ + RV LR++SY LHK+L NK DPLVSLM
Sbjct: 78 IVSDKKVLVKVQPEGKYIVDVAKDINVKDLKASQRVCLRSDSYMLHKVLENKADPLVSLM 137
Query: 201 MVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTL 260
MVEKVPDSTY+MVGGL QIKEIKEVIELPVKHPELF++LGIAQPKGV+LYGPPGTGKTL
Sbjct: 138 MVEKVPDSTYDMVGGLTKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTL 197
Query: 261 LARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTI 320
LARAVAHHT+C FIRVSG+ELVQK+IGEGSRMVRELFVMA
Sbjct: 198 LARAVAHHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMA-------------------- 237
Query: 321 LTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGS+R+E GGDSEVQRTMLELLNQLDGFE +K
Sbjct: 238 ---------REHAPSIIFMDEIDSIGSTRVEGSGGGDSEVQRTMLELLNQLDGFETSK 286
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 41/46 (89%), Positives = 45/46 (97%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+C FIRVSG+ELVQK+IGEGSRMVRELFVMAR
Sbjct: 193 TGKTLLARAVAHHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMAR 238
>gi|228885|prf||1813279A SUG1 gene
Length = 400
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 203/298 (68%), Positives = 236/298 (79%), Gaps = 29/298 (9%)
Query: 81 GFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVK 140
G KPY+ KI+E +L + K +N RRL+AQRN LN KVR +++EL+LLQE GSYVGEV+K
Sbjct: 18 GIKPYFEQKIQETELKIRSKTENGRRLEAQRNALNDKVRFIKDELRLLQEPGSYVGEVIK 77
Query: 141 PMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLM 200
+ KKVLVKV PEGK++VD+ K+I++ D+ + RV LR++SY LHK+L NK DPLVSLM
Sbjct: 78 IVSDKKVLVKVQPEGKYIVDVAKDINVKDLKASQRVCLRSDSYMLHKVLENKADPLVSLM 137
Query: 201 MVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTL 260
MVEKVPDSTY+MVGGL QIKEIKEVIELPVKHPELF++LGIAQPKGV+LYGPPGTGKTL
Sbjct: 138 MVEKVPDSTYDMVGGLTKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTL 197
Query: 261 LARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTI 320
LARAVAHHT+C FIRVSG+ELVQK+IGEGSRMVRELFVMA
Sbjct: 198 LARAVAHHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMA-------------------- 237
Query: 321 LTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGS+R+E GGDSEVQRTMLELLNQLDGFE +K
Sbjct: 238 ---------REHAPSIIFMDEIDSIGSTRVEGSGGGDSEVQRTMLELLNQLDGFETSK 286
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 41/46 (89%), Positives = 45/46 (97%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+C FIRVSG+ELVQK+IGEGSRMVRELFVMAR
Sbjct: 193 TGKTLLARAVAHHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMAR 238
>gi|325189289|emb|CCA23809.1| conserved unknown protein putative [Albugo laibachii Nc14]
Length = 407
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 221/308 (71%), Positives = 248/308 (80%), Gaps = 32/308 (10%)
Query: 73 DEAIKSSEGFK--PYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQE 130
D+ I + F+ YY KIE+L+L V EK QNLRRLQAQRNELN+KVR+LREELQLLQE
Sbjct: 11 DDQILDGDHFRLTSYYQQKIEQLELTVREKTQNLRRLQAQRNELNSKVRLLREELQLLQE 70
Query: 131 QGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILP 190
GSYVGEV+K M K KVLVK++PEGK+VV++D++IDI TPN RVALRN+SY +HKILP
Sbjct: 71 PGSYVGEVIKQMGKSKVLVKINPEGKYVVEVDRSIDITKCTPNTRVALRNDSYLIHKILP 130
Query: 191 NKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLL 250
KVDPLVSLM VEKVPDSTY+M+GGL QI+EIKEVIELP+KHPELF+ALG+AQPKGVLL
Sbjct: 131 TKVDPLVSLMKVEKVPDSTYDMIGGLGKQIREIKEVIELPIKHPELFEALGVAQPKGVLL 190
Query: 251 YGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHH 310
YGPPGTGKTLLARAVAHHTECTFIRVSG+ELVQK+IGEGSRMVRELFVMA
Sbjct: 191 YGPPGTGKTLLARAVAHHTECTFIRVSGAELVQKYIGEGSRMVRELFVMA---------- 240
Query: 311 PLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQ 370
RE APSIIFMDEIDSIGSSR+E G GGDSEVQRTMLELLNQ
Sbjct: 241 -------------------REAAPSIIFMDEIDSIGSSRME-GGGGDSEVQRTMLELLNQ 280
Query: 371 LDGFEATK 378
LDGFE +
Sbjct: 281 LDGFEPAQ 288
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/68 (72%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHTECTFIRVSG+ELVQK+IGEGSRMVRELFVMAR S MD
Sbjct: 196 TGKTLLARAVAHHTECTFIRVSGAELVQKYIGEGSRMVRELFVMAREAAPS----IIFMD 251
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 252 EIDSIGSS 259
>gi|320581811|gb|EFW96030.1| 26S protease regulatory subunit 8 [Ogataea parapolymorpha DL-1]
Length = 398
Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust.
Identities = 217/299 (72%), Positives = 247/299 (82%), Gaps = 30/299 (10%)
Query: 81 GFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVK 140
G KP++ KI++ ++ V +K QNLRRL+AQRN LNAKVR L++EL+LLQE GSYVGEVVK
Sbjct: 10 GIKPFFKQKIQDFEIQVNDKTQNLRRLEAQRNALNAKVRALKDELKLLQEPGSYVGEVVK 69
Query: 141 PMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLM 200
M KKKVLVKVHPEGK+VV++ +IDI +TP+ RV LR+++Y LH+ILPNKVDPLVSLM
Sbjct: 70 VMGKKKVLVKVHPEGKYVVNVANDIDIKKITPSLRVCLRSDTYELHQILPNKVDPLVSLM 129
Query: 201 MVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTL 260
MVEKVPDSTY+MVGGLD QIKEIKEVIELPVKHPELF++LGIAQPKGV+LYGPPGTGKTL
Sbjct: 130 MVEKVPDSTYDMVGGLDKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTL 189
Query: 261 LARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTI 320
LARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 190 LARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMA-------------------- 229
Query: 321 LTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGS-GGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGSSR+ES S GGDSEVQRTMLELLNQLDGFE++K
Sbjct: 230 ---------REHAPSIIFMDEIDSIGSSRVESSSGGGDSEVQRTMLELLNQLDGFESSK 279
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 53/68 (77%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMAR S MD
Sbjct: 185 TGKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPS----IIFMD 240
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 241 EIDSIGSS 248
>gi|112253387|gb|ABI14281.1| ATP-dependent 26S proteasome regulatory subunit [Pfiesteria
piscicida]
Length = 402
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 202/297 (68%), Positives = 230/297 (77%), Gaps = 29/297 (9%)
Query: 81 GFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVK 140
G + YY T I+EL+ + E++ N RRL+AQRNELNA+VR+LREEL +L E S GE++K
Sbjct: 15 GIQSYYDTNIQELEARIRERKLNNRRLEAQRNELNARVRLLREELHMLLEPASNCGEIIK 74
Query: 141 PMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLM 200
M K K+LVK EGK+VVD DK+I I + PN RVALR++SY LHKILP+KVDPLV LM
Sbjct: 75 AMGKDKILVKCGQEGKYVVDKDKDITIEECKPNARVALRSDSYVLHKILPSKVDPLVQLM 134
Query: 201 MVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTL 260
VEK PDSTYEMVGG+D QIKEIKEVIELP+KHPE+F++LGIAQPKGVLLYGPPGTGKTL
Sbjct: 135 RVEKTPDSTYEMVGGVDKQIKEIKEVIELPIKHPEIFESLGIAQPKGVLLYGPPGTGKTL 194
Query: 261 LARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTI 320
LARAVAHHT+C FIRVSG ELVQK+IGEGSRMVRELFVMA
Sbjct: 195 LARAVAHHTQCCFIRVSGGELVQKYIGEGSRMVRELFVMA-------------------- 234
Query: 321 LTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEAT 377
REHAPSIIFMDE+DSIGSSR+E GGDSEVQRTMLELLNQLDGFEA
Sbjct: 235 ---------REHAPSIIFMDEVDSIGSSRVEGSEGGDSEVQRTMLELLNQLDGFEAA 282
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 52/68 (76%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+C FIRVSG ELVQK+IGEGSRMVRELFVMAR S MD
Sbjct: 190 TGKTLLARAVAHHTQCCFIRVSGGELVQKYIGEGSRMVRELFVMAREHAPS----IIFMD 245
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 246 EVDSIGSS 253
>gi|195060996|ref|XP_001995904.1| GH14117 [Drosophila grimshawi]
gi|193891696|gb|EDV90562.1| GH14117 [Drosophila grimshawi]
Length = 407
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 214/300 (71%), Positives = 244/300 (81%), Gaps = 29/300 (9%)
Query: 77 KSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVG 136
++S G Y KI ELQ I++EK++NL+RL+AQRNELN+KVR+LREEL LL E GSYV
Sbjct: 16 QTSNGLSSYCEQKIAELQFILSEKKRNLQRLEAQRNELNSKVRLLREELLLLHEHGSYVA 75
Query: 137 EVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPL 196
EVVK +D KKVLVKV +GK+VVD+D+++DIN +T N RVALR +SY LHKILP+KVDP+
Sbjct: 76 EVVKSIDTKKVLVKVRHDGKYVVDVDESLDINAITRNSRVALRRDSYQLHKILPSKVDPV 135
Query: 197 VSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGT 256
VSLM+VEKVPDSTYEMVGGL QI EIKEVIELP+KHPELFDALGIAQPKGVLL+GPPGT
Sbjct: 136 VSLMLVEKVPDSTYEMVGGLSTQITEIKEVIELPIKHPELFDALGIAQPKGVLLFGPPGT 195
Query: 257 GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWS 316
GKTLLARAVAHHTECTFIRVSGSELVQK+IGEGSR+VRELFVMA
Sbjct: 196 GKTLLARAVAHHTECTFIRVSGSELVQKYIGEGSRLVRELFVMA---------------- 239
Query: 317 LLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
REHAPSIIFMDEIDSIGS+R++SG G DSEVQRTMLELLNQLDGFE+
Sbjct: 240 -------------REHAPSIIFMDEIDSIGSARVKSGHGADSEVQRTMLELLNQLDGFES 286
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/46 (93%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHTECTFIRVSGSELVQK+IGEGSR+VRELFVMAR
Sbjct: 195 TGKTLLARAVAHHTECTFIRVSGSELVQKYIGEGSRLVRELFVMAR 240
>gi|328350112|emb|CCA36512.1| 26S protease regulatory subunit 8 [Komagataella pastoris CBS 7435]
Length = 397
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 212/305 (69%), Positives = 249/305 (81%), Gaps = 30/305 (9%)
Query: 75 AIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSY 134
A+ G +P++ KI++ ++ +A K QNLRRL+AQRN LN+KVR L++EL+LLQE GSY
Sbjct: 3 AMTHQGGVRPFFAQKIQDTEIQIAAKTQNLRRLEAQRNSLNSKVRALKDELKLLQEPGSY 62
Query: 135 VGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVD 194
VGEVVK M KKKVLVK+HPEGK++V++ +IDI ++P+ RV L++++Y LH+ILPNKVD
Sbjct: 63 VGEVVKVMGKKKVLVKIHPEGKYIVNLAPDIDIKKISPSLRVCLKSDTYELHQILPNKVD 122
Query: 195 PLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPP 254
PLVSLMMVEKVPDSTY+MVGGLD QIKEIKEVIELPVKHPELF++LGIAQPKGV+LYGPP
Sbjct: 123 PLVSLMMVEKVPDSTYDMVGGLDQQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPP 182
Query: 255 GTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLF 314
GTGKTLLARAVAHHTEC FIRVSGSELVQK+IGEGSRMVRELF+MA
Sbjct: 183 GTGKTLLARAVAHHTECKFIRVSGSELVQKYIGEGSRMVRELFIMA-------------- 228
Query: 315 WSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGS-GGDSEVQRTMLELLNQLDG 373
REHAPSIIFMDEIDSIGSSR+ES S GGDSEVQRTMLELLNQLDG
Sbjct: 229 ---------------REHAPSIIFMDEIDSIGSSRVESSSGGGDSEVQRTMLELLNQLDG 273
Query: 374 FEATK 378
FE++K
Sbjct: 274 FESSK 278
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 53/68 (77%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHTEC FIRVSGSELVQK+IGEGSRMVRELF+MAR S MD
Sbjct: 184 TGKTLLARAVAHHTECKFIRVSGSELVQKYIGEGSRMVRELFIMAREHAPS----IIFMD 239
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 240 EIDSIGSS 247
>gi|19112662|ref|NP_595870.1| 19S proteasome regulatory subunit Rpt6 (predicted)
[Schizosaccharomyces pombe 972h-]
gi|1170767|sp|P41836.1|PRS8_SCHPO RecName: Full=26S protease regulatory subunit 8 homolog; AltName:
Full=Protein let1
gi|406051|gb|AAA61615.1| Let1 [Schizosaccharomyces pombe]
gi|4106689|emb|CAA22628.1| 19S proteasome regulatory subunit Rpt6 (predicted)
[Schizosaccharomyces pombe]
Length = 403
Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust.
Identities = 217/315 (68%), Positives = 243/315 (77%), Gaps = 33/315 (10%)
Query: 65 TEFFTMDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREE 124
TE +V ++S+E YY KI++ +L + +K QNLRRL+AQRN LNA+VR+LREE
Sbjct: 2 TEVLKTNV---LQSNENIVQYYTQKIQDAELAILQKTQNLRRLEAQRNGLNARVRLLREE 58
Query: 125 LQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYT 184
+QLLQE GSYVGEV+K M K KVLVKVHPEGK+VVDI +IDI ++ PN RVALRN+SY
Sbjct: 59 IQLLQEPGSYVGEVIKTMGKNKVLVKVHPEGKYVVDISPDIDIKEIKPNIRVALRNDSYQ 118
Query: 185 LHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQ 244
L KILPNKVDPLVSLMMVEK+PDSTYEMVGGL+ QIKEIKEVIELPVKHPELF++LGI Q
Sbjct: 119 LIKILPNKVDPLVSLMMVEKIPDSTYEMVGGLEKQIKEIKEVIELPVKHPELFESLGIPQ 178
Query: 245 PKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKK 304
PKG+LLYGPPGTGKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 179 PKGILLYGPPGTGKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMA---- 234
Query: 305 LAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEI-DSIGSSRIESGSGGDSEVQRT 363
REHAPSIIFMDEI S SG GDSEVQRT
Sbjct: 235 -------------------------REHAPSIIFMDEIDSIGSSRSDSSGGSGDSEVQRT 269
Query: 364 MLELLNQLDGFEATK 378
MLELLNQLDGFEATK
Sbjct: 270 MLELLNQLDGFEATK 284
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/51 (84%), Positives = 46/51 (90%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMAR S
Sbjct: 190 TGKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPS 240
>gi|209877256|ref|XP_002140070.1| 26S protease regulatory subunit 8 [Cryptosporidium muris RN66]
gi|209555676|gb|EEA05721.1| 26S protease regulatory subunit 8, putative [Cryptosporidium muris
RN66]
Length = 396
Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust.
Identities = 204/294 (69%), Positives = 236/294 (80%), Gaps = 30/294 (10%)
Query: 85 YYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDK 144
YY ++IE+L++ ++ ++ N+RRL AQRNELN KVR LREELQ L E SYVGEV+K M +
Sbjct: 14 YYKSRIEQLKVAISSQQLNIRRLHAQRNELNFKVRELREELQYLLESNSYVGEVIKVMGR 73
Query: 145 KKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEK 204
KVLVK++PEGKF+VDI KNIDI+ T N RVAL ++S+ LH+I P+KVDPLVSLM VEK
Sbjct: 74 NKVLVKLNPEGKFLVDIAKNIDISQCTTNTRVALLSDSFKLHRIFPSKVDPLVSLMKVEK 133
Query: 205 VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 264
VPDSTY++VGGLD QIKEIKEVIELP+KHPE+F++LGIAQPKGVLLYGPPGTGKTLLARA
Sbjct: 134 VPDSTYDIVGGLDEQIKEIKEVIELPIKHPEIFESLGIAQPKGVLLYGPPGTGKTLLARA 193
Query: 265 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNT 324
VAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 194 VAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMA------------------------ 229
Query: 325 IVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPS+IFMDEIDSIGS R E G GDSEVQRTMLELLNQLDGFE+T+
Sbjct: 230 -----REHAPSLIFMDEIDSIGSQRTE-GETGDSEVQRTMLELLNQLDGFESTQ 277
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 43/46 (93%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMAR
Sbjct: 185 TGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAR 230
>gi|66801413|ref|XP_629632.1| 26S proteasome subunit ATPase 5 [Dictyostelium discoideum AX4]
gi|166208497|sp|P34124.2|PRS8_DICDI RecName: Full=26S protease regulatory subunit 8; AltName: Full=26S
proteasome AAA-ATPase subunit RPT6; AltName:
Full=Proteasome 26S subunit ATPase 5; AltName:
Full=Tat-binding protein homolog 10
gi|60462974|gb|EAL61170.1| 26S proteasome subunit ATPase 5 [Dictyostelium discoideum AX4]
Length = 403
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 212/301 (70%), Positives = 239/301 (79%), Gaps = 30/301 (9%)
Query: 79 SEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEV 138
++G K YY +KIEEL++ V EK Q+LRRL+AQRNELN +VRML+EELQLL GS+V EV
Sbjct: 13 TKGIKSYYCSKIEELEIKVNEKAQDLRRLEAQRNELNNRVRMLKEELQLLTNPGSHVAEV 72
Query: 139 VKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVS 198
VK M K KVLVKV+PEGKFVVDID +DI +TP+ R AL++ESYTLH+ILPNK+DPLVS
Sbjct: 73 VKLMGKNKVLVKVNPEGKFVVDIDPTVDIAKLTPSTRAALKHESYTLHRILPNKIDPLVS 132
Query: 199 LMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGK 258
LM VEK+PDSTY+MVGGLD QIKEIKEVIELP+KHPELF++LGIAQPKGVLLYGPPGTGK
Sbjct: 133 LMKVEKIPDSTYDMVGGLDKQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGK 192
Query: 259 TLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLL 318
TLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELF+MA
Sbjct: 193 TLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFIMA------------------ 234
Query: 319 TILTNTIVCNFREHAPSIIFMDEID-SIGSSRIESGSGGDSEVQRTMLELLNQLDGFEAT 377
REHAPSIIFMDEID S GGDSEVQRTMLELLNQLDGFE+T
Sbjct: 235 -----------REHAPSIIFMDEIDSIGSSRGESGSGGGDSEVQRTMLELLNQLDGFEST 283
Query: 378 K 378
K
Sbjct: 284 K 284
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/46 (91%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELF+MAR
Sbjct: 190 TGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFIMAR 235
>gi|156843550|ref|XP_001644842.1| hypothetical protein Kpol_1041p42 [Vanderwaltozyma polyspora DSM
70294]
gi|156115493|gb|EDO16984.1| hypothetical protein Kpol_1041p42 [Vanderwaltozyma polyspora DSM
70294]
Length = 403
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 204/299 (68%), Positives = 239/299 (79%), Gaps = 30/299 (10%)
Query: 81 GFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVK 140
G KPY+ KI+E +L + EK +NLRRL+AQRN LN KVR +++EL+LLQE GSYVGEV+K
Sbjct: 15 GIKPYFEQKIQETELKIHEKTENLRRLEAQRNALNDKVRFIKDELRLLQEPGSYVGEVIK 74
Query: 141 PMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLM 200
+ K+VLVKV PEGK++VD+ K+I++ D+ P+ RV L++++Y LHK+L NK DPLVSLM
Sbjct: 75 VVSDKRVLVKVQPEGKYIVDVAKDINVKDLKPSQRVCLKSDTYMLHKVLENKADPLVSLM 134
Query: 201 MVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTL 260
MVEKVPDSTY+MVGGL QIKEIKEVIELPVKHPELF++LGIAQPKGV+LYGPPGTGKTL
Sbjct: 135 MVEKVPDSTYDMVGGLTKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTL 194
Query: 261 LARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTI 320
LARAVAHHT+C FIRVSG+ELVQK+IGEGSRMVRELFVMA
Sbjct: 195 LARAVAHHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMA-------------------- 234
Query: 321 LTNTIVCNFREHAPSIIFMDEIDSIGSSRIE-SGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGSSR+E GGDSEVQRTMLELLNQLDGFE +K
Sbjct: 235 ---------REHAPSIIFMDEIDSIGSSRVEGGSGGGDSEVQRTMLELLNQLDGFETSK 284
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 53/68 (77%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+C FIRVSG+ELVQK+IGEGSRMVRELFVMAR S MD
Sbjct: 190 TGKTLLARAVAHHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMAREHAPS----IIFMD 245
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 246 EIDSIGSS 253
>gi|145531483|ref|XP_001451508.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124419163|emb|CAK84111.1| unnamed protein product [Paramecium tetraurelia]
Length = 393
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 196/297 (65%), Positives = 238/297 (80%), Gaps = 29/297 (9%)
Query: 82 FKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKP 141
+K Y K++ L+ ++AEK+ N++R +AQRNELN++VR ++EELQ LQE SYVG+VVK
Sbjct: 7 YKQYIQGKLDLLEFMIAEKQANVKRQEAQRNELNSQVRQVKEELQALQEPHSYVGDVVKQ 66
Query: 142 MDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMM 201
M K KVLVKV+PEGK+VV +DKNI I D PN RVAL+++SY LHKILP KVDPLVSLM
Sbjct: 67 MGKDKVLVKVNPEGKYVVTLDKNIKIEDCKPNTRVALKSDSYVLHKILPTKVDPLVSLMK 126
Query: 202 VEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLL 261
VEKVPDSTY+M+GGLD Q+KE+KEVIELP+KHPE+F++LGIAQPKGVLLYGPPGTGKTLL
Sbjct: 127 VEKVPDSTYDMIGGLDQQVKEVKEVIELPIKHPEIFESLGIAQPKGVLLYGPPGTGKTLL 186
Query: 262 ARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTIL 321
ARA+AHHT+CTFIRVSGSELVQK+IGEG+RMVRELFVMA
Sbjct: 187 ARAIAHHTDCTFIRVSGSELVQKYIGEGARMVRELFVMA--------------------- 225
Query: 322 TNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
R+H+P +IF+DE+DSIG +R+E GGDSEVQRTMLELLNQLDGFE+T+
Sbjct: 226 --------RQHSPCLIFIDEVDSIGGARMEGERGGDSEVQRTMLELLNQLDGFESTQ 274
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/46 (89%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARA+AHHT+CTFIRVSGSELVQK+IGEG+RMVRELFVMAR
Sbjct: 181 TGKTLLARAIAHHTDCTFIRVSGSELVQKYIGEGARMVRELFVMAR 226
>gi|126649271|ref|XP_001388307.1| 26s protease regulatory subunit 8 [Cryptosporidium parvum Iowa II]
gi|32398680|emb|CAD98640.1| 26s protease regulatory subunit 8, probable [Cryptosporidium
parvum]
gi|126117401|gb|EAZ51501.1| 26s protease regulatory subunit 8, putative [Cryptosporidium parvum
Iowa II]
Length = 393
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 202/294 (68%), Positives = 235/294 (79%), Gaps = 30/294 (10%)
Query: 85 YYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDK 144
YY +IE L++++ K+ ++RRL AQRNELN+KV+ L++ELQ L E SYVGEV+K M +
Sbjct: 11 YYSKRIEHLKILIDSKKLDIRRLHAQRNELNSKVKELKDELQYLLESNSYVGEVIKVMGR 70
Query: 145 KKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEK 204
KVLVK++PEGKF+VD+ KNIDI+ T N RVAL ++S+ LH+I PNKVDPLVSLM VEK
Sbjct: 71 NKVLVKLNPEGKFLVDVSKNIDISKCTTNTRVALLSDSFKLHRIFPNKVDPLVSLMKVEK 130
Query: 205 VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 264
VPDSTY+MVGGLD QIKEIKEVIELP+KHPE+F++LGIAQPKGVLLYGPPGTGKTLLARA
Sbjct: 131 VPDSTYDMVGGLDEQIKEIKEVIELPIKHPEIFESLGIAQPKGVLLYGPPGTGKTLLARA 190
Query: 265 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNT 324
VAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 191 VAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMA------------------------ 226
Query: 325 IVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPS+IFMDEIDSIGS R E G GDSEVQRTMLELLNQLDGFE+T+
Sbjct: 227 -----REHAPSLIFMDEIDSIGSQRTE-GESGDSEVQRTMLELLNQLDGFESTQ 274
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 43/46 (93%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMAR
Sbjct: 182 TGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAR 227
>gi|444317336|ref|XP_004179325.1| hypothetical protein TBLA_0B09880 [Tetrapisispora blattae CBS 6284]
gi|387512365|emb|CCH59806.1| hypothetical protein TBLA_0B09880 [Tetrapisispora blattae CBS 6284]
Length = 401
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 202/299 (67%), Positives = 240/299 (80%), Gaps = 30/299 (10%)
Query: 81 GFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVK 140
G KPY+ KI++++L + K +NLRRL+AQRN+LN KVR +R+EL+LLQE GSYVGE++K
Sbjct: 13 GIKPYFEQKIQDIELQIRAKTENLRRLEAQRNQLNDKVRFIRDELRLLQEPGSYVGEIIK 72
Query: 141 PMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLM 200
+ K+VLVK+ PEGK++VD+ K+I+I ++ P+ RV L+++SY LHK+L NK DPLVSLM
Sbjct: 73 IISDKRVLVKIQPEGKYIVDVAKDINIKELKPSQRVCLKSDSYLLHKVLKNKSDPLVSLM 132
Query: 201 MVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTL 260
MVEKVPDSTY+MVGGL QIKEIKEVIELPVKHPELF++LGIAQPKGV+LYGPPGTGKTL
Sbjct: 133 MVEKVPDSTYDMVGGLTKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTL 192
Query: 261 LARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTI 320
LARAVAHHT+C FIRVSG+ELVQK+IGEGSRMVRELFVMA
Sbjct: 193 LARAVAHHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMA-------------------- 232
Query: 321 LTNTIVCNFREHAPSIIFMDEIDSIGSSRIE-SGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGSSR+E GGDSEVQRTMLELLNQLDGFE +K
Sbjct: 233 ---------REHAPSIIFMDEIDSIGSSRVEGGSGGGDSEVQRTMLELLNQLDGFETSK 282
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 53/68 (77%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+C FIRVSG+ELVQK+IGEGSRMVRELFVMAR S MD
Sbjct: 188 TGKTLLARAVAHHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMAREHAPS----IIFMD 243
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 244 EIDSIGSS 251
>gi|365986020|ref|XP_003669842.1| hypothetical protein NDAI_0D02850 [Naumovozyma dairenensis CBS 421]
gi|343768611|emb|CCD24599.1| hypothetical protein NDAI_0D02850 [Naumovozyma dairenensis CBS 421]
Length = 405
Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust.
Identities = 204/299 (68%), Positives = 238/299 (79%), Gaps = 30/299 (10%)
Query: 81 GFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVK 140
G KPY+ +I+E +L + K +NLRRL+AQRN LN KVR +++EL+LLQE GSYVGEV+K
Sbjct: 17 GIKPYFDQQIQETELKIRSKTENLRRLEAQRNALNDKVRFIKDELRLLQEPGSYVGEVIK 76
Query: 141 PMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLM 200
+ KKVLVKV PEGK++VD+ K+IDI ++ P+ RV L+++SY LHK+L NK DPLVSLM
Sbjct: 77 VVSDKKVLVKVQPEGKYIVDVAKDIDIKNLKPSQRVCLKSDSYMLHKVLENKSDPLVSLM 136
Query: 201 MVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTL 260
MVEKVPDSTY+MVGGL QIKEIKEVIELPVKHPELF++LGIAQPKGV+LYGPPGTGKTL
Sbjct: 137 MVEKVPDSTYDMVGGLTKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTL 196
Query: 261 LARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTI 320
LARAVAHHT+C FIRVSG+ELVQK+IGEGSRMVRELFVMA
Sbjct: 197 LARAVAHHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMA-------------------- 236
Query: 321 LTNTIVCNFREHAPSIIFMDEIDSIGSSRIE-SGSGGDSEVQRTMLELLNQLDGFEATK 378
R+HAPSIIFMDEIDSIGSSR+E GGDSEVQRTMLELLNQLDGFE +K
Sbjct: 237 ---------RQHAPSIIFMDEIDSIGSSRVEGGSGGGDSEVQRTMLELLNQLDGFETSK 286
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 53/68 (77%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+C FIRVSG+ELVQK+IGEGSRMVRELFVMAR S MD
Sbjct: 192 TGKTLLARAVAHHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMARQHAPS----IIFMD 247
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 248 EIDSIGSS 255
>gi|353237411|emb|CCA69384.1| probable RPT6-26S proteasome regulatory subunit [Piriformospora
indica DSM 11827]
Length = 523
Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust.
Identities = 219/299 (73%), Positives = 238/299 (79%), Gaps = 30/299 (10%)
Query: 81 GFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVK 140
G K YY KIE +L + E+ QNLRRL+AQRN LNA+VR+LREELQLL E GSYVGEVVK
Sbjct: 135 GIKAYYQAKIEAAELTINERTQNLRRLEAQRNALNARVRLLREELQLLMEPGSYVGEVVK 194
Query: 141 PMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLM 200
M K KVLVKV PEGK++VD+D +ID+N +TPN RVALR+++Y LHKILPNKVDPLVSLM
Sbjct: 195 AMGKTKVLVKVQPEGKYIVDLDPDIDVNKLTPNLRVALRSDNYLLHKILPNKVDPLVSLM 254
Query: 201 MVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTL 260
MVEKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELF++LGIAQPKGVLLYGPPGTGKTL
Sbjct: 255 MVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFESLGIAQPKGVLLYGPPGTGKTL 314
Query: 261 LARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTI 320
LARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 315 LARAVAHHTDCRFIRVSGSELVQKYIGEGSRMVRELFVMA-------------------- 354
Query: 321 LTNTIVCNFREHAPSIIFMDEID-SIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEID S GS GDSEVQRTMLELLNQLDGFEATK
Sbjct: 355 ---------REHAPSIIFMDEIDSIGSSRGEGGGSNGDSEVQRTMLELLNQLDGFEATK 404
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/46 (91%), Positives = 45/46 (97%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMAR
Sbjct: 310 TGKTLLARAVAHHTDCRFIRVSGSELVQKYIGEGSRMVRELFVMAR 355
>gi|403331712|gb|EJY64820.1| hypothetical protein OXYTRI_15032 [Oxytricha trifallax]
gi|403339348|gb|EJY68933.1| hypothetical protein OXYTRI_10451 [Oxytricha trifallax]
Length = 404
Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust.
Identities = 202/299 (67%), Positives = 237/299 (79%), Gaps = 30/299 (10%)
Query: 79 SEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEV 138
S+G + YY K+EEL+L + EK+ NLRRL+AQRNE+N V+ L+EEL LL + S +GEV
Sbjct: 17 SQGLESYYKKKVEELELKILEKKSNLRRLEAQRNEMNNLVKNLKEELYLLLQPASQIGEV 76
Query: 139 VKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVS 198
K M KKK LVK+ EGK+VVD+D+ I+++ +TPN RVAL+++SY LHKILP+K DPLV+
Sbjct: 77 TKMMGKKKCLVKIGGEGKYVVDVDRKINVDLLTPNTRVALKSDSYLLHKILPSKTDPLVN 136
Query: 199 LMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGK 258
LM VEKVPDSTY+MVGGLD QIKE+KEVIELP+KHPE+F++LGI+QPKGVLLYGPPGTGK
Sbjct: 137 LMKVEKVPDSTYDMVGGLDQQIKEVKEVIELPIKHPEIFESLGISQPKGVLLYGPPGTGK 196
Query: 259 TLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLL 318
TLLARAVAHHT+CTFIRVSGSELVQK+IGEG+RMVRELFVMA
Sbjct: 197 TLLARAVAHHTDCTFIRVSGSELVQKYIGEGARMVRELFVMA------------------ 238
Query: 319 TILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEAT 377
R HAPSIIFMDEIDSIG RIE GS GDSEVQRTMLELLNQLDGFEAT
Sbjct: 239 -----------RAHAPSIIFMDEIDSIGGQRIE-GSRGDSEVQRTMLELLNQLDGFEAT 285
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 43/51 (84%), Positives = 47/51 (92%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
+GKTLLARAVAHHT+CTFIRVSGSELVQK+IGEG+RMVRELFVMAR S
Sbjct: 194 TGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGARMVRELFVMARAHAPS 244
>gi|320166895|gb|EFW43794.1| tat-binding protein 10 [Capsaspora owczarzaki ATCC 30864]
Length = 425
Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust.
Identities = 219/299 (73%), Positives = 241/299 (80%), Gaps = 30/299 (10%)
Query: 81 GFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVK 140
G + Y+ +KI+ELQL V K QNLRRLQAQRNELN+KVR+LREELQLL E GSYVGEVVK
Sbjct: 37 GIRQYFTSKIQELQLTVQTKTQNLRRLQAQRNELNSKVRLLREELQLLLEPGSYVGEVVK 96
Query: 141 PMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLM 200
M K KVLVKVHP+GK+VVD+DK ++++ +TPN RVALRN++Y +HKILPNK+DPLVSLM
Sbjct: 97 IMGKTKVLVKVHPDGKYVVDLDKGVEMSQLTPNLRVALRNDTYAIHKILPNKIDPLVSLM 156
Query: 201 MVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTL 260
MVEKVPDSTYEMVGGLD QIKEIKEVIELP KHPELFD+LGI QPKGVLLYGPPGTGKTL
Sbjct: 157 MVEKVPDSTYEMVGGLDKQIKEIKEVIELPFKHPELFDSLGIDQPKGVLLYGPPGTGKTL 216
Query: 261 LARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTI 320
LARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 217 LARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMA-------------------- 256
Query: 321 LTNTIVCNFREHAPSIIFMDEIDSI-GSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSI + GDSEVQRTMLELLNQLDGFEATK
Sbjct: 257 ---------REHAPSIIFMDEIDSIGSTRSEGGSGSGDSEVQRTMLELLNQLDGFEATK 306
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 43/46 (93%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMAR
Sbjct: 212 TGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAR 257
>gi|213403224|ref|XP_002172384.1| 19S proteasome regulatory subunit Rpt6 [Schizosaccharomyces
japonicus yFS275]
gi|212000431|gb|EEB06091.1| 19S proteasome regulatory subunit Rpt6 [Schizosaccharomyces
japonicus yFS275]
gi|289449226|dbj|BAI77476.1| 19S protesome regulatory subunit Rpt6 [Schizosaccharomyces
japonicus]
Length = 403
Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust.
Identities = 207/295 (70%), Positives = 230/295 (77%), Gaps = 30/295 (10%)
Query: 85 YYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDK 144
YY KI++++ + + NLRRL+AQRNELNAKVR+LREE+QLLQE GSYVGEVVK M K
Sbjct: 19 YYTQKIQDVEAAIIRRTHNLRRLEAQRNELNAKVRLLREEIQLLQEPGSYVGEVVKMMGK 78
Query: 145 KKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEK 204
KVLVKVHPEGK+VVDI ++D+ ++ PN RVALRN+SY L K+LPNKVDPLVSLMMVEK
Sbjct: 79 NKVLVKVHPEGKYVVDIAPDVDVREIKPNMRVALRNDSYQLIKVLPNKVDPLVSLMMVEK 138
Query: 205 VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 264
+PDSTY MVGGL+ QIKEIKEVIELPVKHPELF++LGI QPKGVLLYGPPGTGKTLLARA
Sbjct: 139 IPDSTYSMVGGLEKQIKEIKEVIELPVKHPELFESLGIPQPKGVLLYGPPGTGKTLLARA 198
Query: 265 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNT 324
VAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 199 VAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMA------------------------ 234
Query: 325 IVCNFREHAPSIIFMDEID-SIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEID S GDSEVQRTMLELLNQLDGFE TK
Sbjct: 235 -----REHAPSIIFMDEIDSIGSSRSESGSGNGDSEVQRTMLELLNQLDGFEPTK 284
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/51 (84%), Positives = 46/51 (90%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMAR S
Sbjct: 190 TGKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPS 240
>gi|260945577|ref|XP_002617086.1| hypothetical protein CLUG_02530 [Clavispora lusitaniae ATCC 42720]
gi|238848940|gb|EEQ38404.1| hypothetical protein CLUG_02530 [Clavispora lusitaniae ATCC 42720]
Length = 399
Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust.
Identities = 201/298 (67%), Positives = 238/298 (79%), Gaps = 30/298 (10%)
Query: 81 GFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVK 140
G KPY+ +I++ ++ + QNLRRL+AQRN+LN KVR L++EL+LL+ S + + K
Sbjct: 13 GIKPYFAQQIQDTEIKIQTTTQNLRRLEAQRNKLNTKVRQLKDELRLLRAW-STLEKWSK 71
Query: 141 PMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLM 200
M KKVLVKV+PEGK++V++ K+IDI +TP+ RV L+++SY LHKILPNKVDPLVSLM
Sbjct: 72 VMGLKKVLVKVNPEGKYIVNVTKDIDIKKLTPSLRVCLKSDSYDLHKILPNKVDPLVSLM 131
Query: 201 MVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTL 260
MVEKVPDSTY+MVGGLD QIKEIKEVIELPVKHPELF++LGIAQPKGV+LYGPPGTGKTL
Sbjct: 132 MVEKVPDSTYDMVGGLDKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTL 191
Query: 261 LARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTI 320
LAR+VAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 192 LARSVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMA-------------------- 231
Query: 321 LTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDE+DSIGSSR+E SGGDSEVQRTMLELLNQLDGFE++K
Sbjct: 232 ---------REHAPSIIFMDEVDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFESSK 280
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 53/68 (77%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLAR+VAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMAR S MD
Sbjct: 187 TGKTLLARSVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPS----IIFMD 242
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 243 EVDSIGSS 250
>gi|195145904|ref|XP_002013930.1| GL24409 [Drosophila persimilis]
gi|194102873|gb|EDW24916.1| GL24409 [Drosophila persimilis]
Length = 569
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 198/238 (83%), Positives = 212/238 (89%), Gaps = 7/238 (2%)
Query: 70 MDVDEAIKSSEG-------FKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLR 122
MD+D A+ + G F+ Y++ KI ELQ VAEK NLRRLQAQRNELN VRMLR
Sbjct: 1 MDIDIALVAVNGGAVKGLGFQSYFMQKISELQFTVAEKNANLRRLQAQRNELNGNVRMLR 60
Query: 123 EELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNES 182
EELQ+L EQGSYVGEV+KPMDK KVLVKVHPEGK+VVD+DK IDI DV P+CRVALRNES
Sbjct: 61 EELQMLLEQGSYVGEVIKPMDKNKVLVKVHPEGKYVVDVDKGIDIKDVVPSCRVALRNES 120
Query: 183 YTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGI 242
YTLHKILP+KVDPLVSLM+VEKVPDSTYEMVGGLD QIKEIKEVIELP+KHPELFDALGI
Sbjct: 121 YTLHKILPSKVDPLVSLMLVEKVPDSTYEMVGGLDKQIKEIKEVIELPIKHPELFDALGI 180
Query: 243 AQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
AQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA
Sbjct: 181 AQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 238
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/46 (97%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR
Sbjct: 194 TGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 239
>gi|294888080|ref|XP_002772340.1| tat-binding protein, putative [Perkinsus marinus ATCC 50983]
gi|239876459|gb|EER04156.1| tat-binding protein, putative [Perkinsus marinus ATCC 50983]
Length = 408
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 212/300 (70%), Positives = 238/300 (79%), Gaps = 29/300 (9%)
Query: 78 SSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGE 137
SS K Y +K+E L+ I+ EK+QN+ RL+AQRNELN+ VR LREELQLL E S VGE
Sbjct: 18 SSSRVKSYMASKVEALEAIIREKQQNVNRLEAQRNELNSSVRQLREELQLLLEPCSSVGE 77
Query: 138 VVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLV 197
VVKPM K +VLVK EGK+VVD+D +IDI TP RVALR+++YTLHK+LP+KVDPLV
Sbjct: 78 VVKPMGKNRVLVKSGSEGKYVVDVDPSIDITKCTPTTRVALRSDTYTLHKLLPSKVDPLV 137
Query: 198 SLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTG 257
SLM VEKVPDSTYEMVGGLD QIKE+KEVIELP+KHPE+F++LGIAQPKGVLLYGPPGTG
Sbjct: 138 SLMKVEKVPDSTYEMVGGLDKQIKEVKEVIELPIKHPEIFESLGIAQPKGVLLYGPPGTG 197
Query: 258 KTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSL 317
KTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 198 KTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMA----------------- 240
Query: 318 LTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEAT 377
REHAPSIIFMDEIDSIG R+E SGGDSEVQRTMLELLNQLDGFEA+
Sbjct: 241 ------------REHAPSIIFMDEIDSIGGQRVEGESGGDSEVQRTMLELLNQLDGFEAS 288
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 43/46 (93%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMAR
Sbjct: 196 TGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAR 241
>gi|294931935|ref|XP_002780060.1| tat-binding protein, putative [Perkinsus marinus ATCC 50983]
gi|239889904|gb|EER11855.1| tat-binding protein, putative [Perkinsus marinus ATCC 50983]
Length = 408
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 212/300 (70%), Positives = 238/300 (79%), Gaps = 29/300 (9%)
Query: 78 SSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGE 137
SS K Y +K+E L+ I+ EK+QN+ RL+AQRNELN+ VR LREELQLL E S VGE
Sbjct: 18 SSSRVKSYMASKVEALEAIIREKQQNVNRLEAQRNELNSSVRQLREELQLLLEPCSSVGE 77
Query: 138 VVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLV 197
VVKPM K +VLVK EGK+VVD+D +IDI TP RVALR+++YTLHK+LP+KVDPLV
Sbjct: 78 VVKPMGKNRVLVKSGSEGKYVVDVDPSIDITKCTPTTRVALRSDTYTLHKLLPSKVDPLV 137
Query: 198 SLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTG 257
SLM VEKVPDSTYEMVGGLD QIKE+KEVIELP+KHPE+F++LGIAQPKGVLLYGPPGTG
Sbjct: 138 SLMKVEKVPDSTYEMVGGLDKQIKEVKEVIELPIKHPEIFESLGIAQPKGVLLYGPPGTG 197
Query: 258 KTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSL 317
KTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 198 KTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMA----------------- 240
Query: 318 LTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEAT 377
REHAPSIIFMDEIDSIG R+E SGGDSEVQRTMLELLNQLDGFEA+
Sbjct: 241 ------------REHAPSIIFMDEIDSIGGQRVEGESGGDSEVQRTMLELLNQLDGFEAS 288
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 43/46 (93%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMAR
Sbjct: 196 TGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAR 241
>gi|366987525|ref|XP_003673529.1| hypothetical protein NCAS_0A05880 [Naumovozyma castellii CBS 4309]
gi|342299392|emb|CCC67146.1| hypothetical protein NCAS_0A05880 [Naumovozyma castellii CBS 4309]
Length = 407
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 205/299 (68%), Positives = 237/299 (79%), Gaps = 30/299 (10%)
Query: 81 GFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVK 140
G KPY+ +I+E +L + K +NLRRL+AQRN LN KVR +++EL+LLQE GSYVGEV+K
Sbjct: 19 GIKPYFEQQIQETELKIRTKTENLRRLEAQRNALNDKVRFIKDELRLLQEPGSYVGEVLK 78
Query: 141 PMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLM 200
+ KKVLVKV PEGK++VDI K+I++ D+ + RV L+++SY LHKIL NK DPLVSLM
Sbjct: 79 VVSDKKVLVKVQPEGKYIVDIAKDINVKDLKTSQRVCLKSDSYMLHKILENKADPLVSLM 138
Query: 201 MVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTL 260
MVEKVPDSTY+MVGGL QIKEIKEVIELPVKHPELF++LGIAQPKGV+LYGPPGTGKTL
Sbjct: 139 MVEKVPDSTYDMVGGLTKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTL 198
Query: 261 LARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTI 320
LARAVAHHT+C FIRVSG+ELVQK+IGEGSRMVRELFVMA
Sbjct: 199 LARAVAHHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMA-------------------- 238
Query: 321 LTNTIVCNFREHAPSIIFMDEIDSIGSSRIE-SGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGSSR+E GGDSEVQRTMLELLNQLDGFE +K
Sbjct: 239 ---------REHAPSIIFMDEIDSIGSSRVEGGSGGGDSEVQRTMLELLNQLDGFETSK 288
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 53/68 (77%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+C FIRVSG+ELVQK+IGEGSRMVRELFVMAR S MD
Sbjct: 194 TGKTLLARAVAHHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMAREHAPS----IIFMD 249
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 250 EIDSIGSS 257
>gi|328767128|gb|EGF77179.1| 26S protease subunit [Batrachochytrium dendrobatidis JAM81]
Length = 400
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 221/309 (71%), Positives = 249/309 (80%), Gaps = 34/309 (11%)
Query: 75 AIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSY 134
A ++ G YY++KIE L++ NLRRL+AQRN+LNAKVR+LREELQLLQE GSY
Sbjct: 2 AATAAVGISEYYMSKIEGLEVKSNSMTHNLRRLEAQRNQLNAKVRLLREELQLLQEPGSY 61
Query: 135 VGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVD 194
VGEVVK M K KVLVKV+PEGK+VVDI +ID++ +TPN RVALR++SY L+K+LPNK+D
Sbjct: 62 VGEVVKVMGKTKVLVKVNPEGKYVVDIHPSIDLSQLTPNVRVALRHDSYQLYKVLPNKID 121
Query: 195 PLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPP 254
PLVSLMMVEKVPDSTYEM+GGL+NQIKEIKEVIELPVKHPELF++LGIAQPKGVLLYGPP
Sbjct: 122 PLVSLMMVEKVPDSTYEMIGGLENQIKEIKEVIELPVKHPELFESLGIAQPKGVLLYGPP 181
Query: 255 GTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLF 314
GTGKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 182 GTGKTLLARAVAHHTDCRFIRVSGSELVQKYIGEGSRMVRELFVMA-------------- 227
Query: 315 WSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIE-----SGSGGDSEVQRTMLELLN 369
REHAPSIIFMDEIDSIGSSR+E G GGDSEVQRTMLELLN
Sbjct: 228 ---------------REHAPSIIFMDEIDSIGSSRMEGGGGGGGGGGDSEVQRTMLELLN 272
Query: 370 QLDGFEATK 378
QLDGFEAT+
Sbjct: 273 QLDGFEATQ 281
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 53/68 (77%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMAR S MD
Sbjct: 183 TGKTLLARAVAHHTDCRFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPS----IIFMD 238
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 239 EIDSIGSS 246
>gi|401880976|gb|EJT45284.1| 26S protease regulatory subunit 6B [Trichosporon asahii var. asahii
CBS 2479]
gi|406697075|gb|EKD00343.1| 26S protease regulatory subunit 6B [Trichosporon asahii var. asahii
CBS 8904]
Length = 402
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 214/302 (70%), Positives = 233/302 (77%), Gaps = 30/302 (9%)
Query: 78 SSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGE 137
+ G K YY KIE + + +K QNLRRL+AQRN LN +VR+LREELQ+LQE GSYVGE
Sbjct: 11 AGSGLKTYYRNKIEAAEHEITKKTQNLRRLEAQRNALNTRVRLLREELQVLQEPGSYVGE 70
Query: 138 VVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLV 197
V+K M KKKVLVKV PEGK+VVD +I + +TPN RVALR +SY LH ILPNKVDPLV
Sbjct: 71 VIKVMGKKKVLVKVQPEGKYVVDFSPDIPASSLTPNLRVALRADSYLLHSILPNKVDPLV 130
Query: 198 SLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTG 257
SLMMVEKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELF++LGIAQPKGVLLYGPPGTG
Sbjct: 131 SLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFESLGIAQPKGVLLYGPPGTG 190
Query: 258 KTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSL 317
KTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 191 KTLLARAVAHHTDCRFIRVSGSELVQKYIGEGSRMVRELFVMA----------------- 233
Query: 318 LTILTNTIVCNFREHAPSIIFMDEID-SIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
REHAPSIIFMDEID S E G GGDSEVQRTM+ELLNQLDGFE
Sbjct: 234 ------------REHAPSIIFMDEIDSIGSSRGGEGGGGGDSEVQRTMMELLNQLDGFEP 281
Query: 377 TK 378
TK
Sbjct: 282 TK 283
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/46 (91%), Positives = 45/46 (97%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMAR
Sbjct: 189 TGKTLLARAVAHHTDCRFIRVSGSELVQKYIGEGSRMVRELFVMAR 234
>gi|145486497|ref|XP_001429255.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124396346|emb|CAK61857.1| unnamed protein product [Paramecium tetraurelia]
Length = 393
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 193/299 (64%), Positives = 236/299 (78%), Gaps = 29/299 (9%)
Query: 80 EGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVV 139
+ K Y K++ L+ ++AEK+ N++R +AQRNELN+ VR ++EEL +QE SYVG+VV
Sbjct: 5 QSVKQYIQGKLDLLEFMIAEKQANVKRQEAQRNELNSLVRQVKEELSAMQEPHSYVGDVV 64
Query: 140 KPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSL 199
K M K KVLVKV+PEGK+VV +DK+I I D PN RVAL+++SY LHKILP KVDPLVSL
Sbjct: 65 KQMGKDKVLVKVNPEGKYVVTLDKSIKIEDCKPNTRVALKSDSYVLHKILPTKVDPLVSL 124
Query: 200 MMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKT 259
M VEKVPDSTY+M+GGLD Q+KE+KEVIELP+KHPE+F++LGIAQPKGVLLYGPPGTGKT
Sbjct: 125 MKVEKVPDSTYDMIGGLDQQVKEVKEVIELPIKHPEIFESLGIAQPKGVLLYGPPGTGKT 184
Query: 260 LLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLT 319
LLARA+AHHT+CTFIRVSGSELVQK+IGEG+RMVRELFVMA
Sbjct: 185 LLARAIAHHTDCTFIRVSGSELVQKYIGEGARMVRELFVMA------------------- 225
Query: 320 ILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
R+H+P +IF+DE+DSIG +R+E GGDSEVQRTMLELLNQLDGFE+T+
Sbjct: 226 ----------RQHSPCLIFIDEVDSIGGARMEGERGGDSEVQRTMLELLNQLDGFESTQ 274
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/46 (89%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARA+AHHT+CTFIRVSGSELVQK+IGEG+RMVRELFVMAR
Sbjct: 181 TGKTLLARAIAHHTDCTFIRVSGSELVQKYIGEGARMVRELFVMAR 226
>gi|290057|gb|AAA33254.1| HIV1 TAT-binding protein, partial [Dictyostelium discoideum]
Length = 389
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 209/294 (71%), Positives = 234/294 (79%), Gaps = 30/294 (10%)
Query: 86 YVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKK 145
Y +KIEEL++ V EK Q+LRRL+AQRNELN +VRML+EELQLL GS+V EVVK M K
Sbjct: 6 YCSKIEELEIKVNEKAQDLRRLEAQRNELNNRVRMLKEELQLLTNPGSHVAEVVKLMGKN 65
Query: 146 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
KVLVKV+PEGKFVVDID +DI +TP+ R AL++ESYTLH+ILPNK+DPLVSLM VEK+
Sbjct: 66 KVLVKVNPEGKFVVDIDPTVDIAKLTPSTRAALKHESYTLHRILPNKIDPLVSLMKVEKI 125
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
PDSTY+MVGGLD QIKEIKEVIELP+KHPELF++LGIAQPKGVLLYGPPGTGKTLLARAV
Sbjct: 126 PDSTYDMVGGLDKQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAV 185
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTI 325
AHHT+CTFIRVSGSELVQK+IGEGSRMVRELF+MA
Sbjct: 186 AHHTDCTFIRVSGSELVQKYIGEGSRMVRELFIMA------------------------- 220
Query: 326 VCNFREHAPSIIFMDEID-SIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEID S GGDSEVQRTMLELLNQLDGFE+TK
Sbjct: 221 ----REHAPSIIFMDEIDSIGSSRGESGSGGGDSEVQRTMLELLNQLDGFESTK 270
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/46 (91%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELF+MAR
Sbjct: 176 TGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFIMAR 221
>gi|145344112|ref|XP_001416582.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576808|gb|ABO94875.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 398
Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust.
Identities = 215/309 (69%), Positives = 245/309 (79%), Gaps = 32/309 (10%)
Query: 70 MDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQ 129
MDVD + G + YY KIEEL++ + +K QNLRRL+AQRNELN +VR LREEL +LQ
Sbjct: 1 MDVD--ARPQTGLRAYYDAKIEELEVRLRDKTQNLRRLEAQRNELNGRVRSLREELHMLQ 58
Query: 130 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKIL 189
E GSYVGEVVK M KKKVLVKVHPEGK+V D+DK+ID+ +T RVALRN+SYTLH IL
Sbjct: 59 EPGSYVGEVVKVMGKKKVLVKVHPEGKYVCDMDKSIDVTKLTAGTRVALRNDSYTLHVIL 118
Query: 190 PNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVL 249
P+ +DPLVSLM VEKVPDST++M+GGLD Q+KEIKEV+ELP+KHPELFDALGIAQPKGV+
Sbjct: 119 PSNIDPLVSLMKVEKVPDSTFDMIGGLDQQVKEIKEVVELPIKHPELFDALGIAQPKGVI 178
Query: 250 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAH 309
LYGPPGTGKTLLARAVAHHT+C FIRVSGSELVQK+IGEG+RMVRELFVMA
Sbjct: 179 LYGPPGTGKTLLARAVAHHTDCCFIRVSGSELVQKYIGEGARMVRELFVMA--------- 229
Query: 310 HPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSR-IESGSGGDSEVQRTMLELL 368
REHAPSI+FMDE+DSIGS+R G GGDSEVQRTMLELL
Sbjct: 230 --------------------REHAPSILFMDEVDSIGSARDGGGGGGGDSEVQRTMLELL 269
Query: 369 NQLDGFEAT 377
NQLDGFEAT
Sbjct: 270 NQLDGFEAT 278
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/46 (89%), Positives = 45/46 (97%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEG+RMVRELFVMAR
Sbjct: 185 TGKTLLARAVAHHTDCCFIRVSGSELVQKYIGEGARMVRELFVMAR 230
>gi|145532457|ref|XP_001451984.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124419661|emb|CAK84587.1| unnamed protein product [Paramecium tetraurelia]
Length = 393
Score = 396 bits (1017), Expect = e-108, Method: Compositional matrix adjust.
Identities = 192/297 (64%), Positives = 236/297 (79%), Gaps = 29/297 (9%)
Query: 82 FKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKP 141
+K Y K++ L+ ++AEK+ N++R +AQRNELN+ VR ++EELQ LQE SYVG+VVK
Sbjct: 7 YKQYIQGKLDLLEFMIAEKQANVKRQEAQRNELNSLVRQVKEELQALQEPHSYVGDVVKQ 66
Query: 142 MDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMM 201
M K KVLVK++ +GK+VV +DK+I I D PN RVAL+++SY LHKILP KVDPLVSLM
Sbjct: 67 MGKDKVLVKLNSDGKYVVTLDKSIKIEDCKPNTRVALKSDSYVLHKILPTKVDPLVSLMK 126
Query: 202 VEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLL 261
VEKVPDSTY+M+GGLD Q+KE+KEVIELP+KHPE+F++LGIAQPKGVLLYGPPGTGKTLL
Sbjct: 127 VEKVPDSTYDMIGGLDQQVKEVKEVIELPIKHPEIFESLGIAQPKGVLLYGPPGTGKTLL 186
Query: 262 ARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTIL 321
ARA+AHHT+CTFIRVSGSELVQK+IGEG+RMVRELFVMA
Sbjct: 187 ARAIAHHTDCTFIRVSGSELVQKYIGEGARMVRELFVMA--------------------- 225
Query: 322 TNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
R+H+P +IF+DE+DSIG +R+E GGDSEVQRTMLELLNQLDGFE+T+
Sbjct: 226 --------RQHSPCLIFIDEVDSIGGARMEGERGGDSEVQRTMLELLNQLDGFESTQ 274
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/46 (89%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARA+AHHT+CTFIRVSGSELVQK+IGEG+RMVRELFVMAR
Sbjct: 181 TGKTLLARAIAHHTDCTFIRVSGSELVQKYIGEGARMVRELFVMAR 226
>gi|291398411|ref|XP_002715511.1| PREDICTED: protease (prosome, macropain) 26S subunit, ATPase
5-like, partial [Oryctolagus cuniculus]
Length = 334
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/244 (81%), Positives = 207/244 (84%), Gaps = 29/244 (11%)
Query: 135 VGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVD 194
VGEVV+ MDKKKVLVKVHPEGKFVVD+DKNIDINDVTPNCRVALRN+SYTLHKILPNKVD
Sbjct: 1 VGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVD 60
Query: 195 PLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPP 254
PLVSLMMVEKVPDSTYEM+GGLD QIKEIKEVIELPVKH E F+ALGIAQ KGVLLYGPP
Sbjct: 61 PLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHLEFFEALGIAQSKGVLLYGPP 120
Query: 255 GTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLF 314
GTGKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVREL VMA
Sbjct: 121 GTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELLVMA-------------- 166
Query: 315 WSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGF 374
REHAPSIIFMDEIDSIGSSR+E GSGGDSEVQR MLELLNQLDGF
Sbjct: 167 ---------------REHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRMMLELLNQLDGF 211
Query: 375 EATK 378
EATK
Sbjct: 212 EATK 215
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 53/68 (77%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVREL VMAR S MD
Sbjct: 122 TGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELLVMAREHAPS----IIFMD 177
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 178 EIDSIGSS 185
>gi|254565165|ref|XP_002489693.1| One of six ATPases of the 19S regulatory particle of the 26S
proteasome involved in the degradation [Komagataella
pastoris GS115]
gi|238029489|emb|CAY67412.1| One of six ATPases of the 19S regulatory particle of the 26S
proteasome involved in the degradation [Komagataella
pastoris GS115]
Length = 385
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 207/289 (71%), Positives = 240/289 (83%), Gaps = 30/289 (10%)
Query: 91 EELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVK 150
++ ++ +A K QNLRRL+AQRN LN+KVR L++EL+LLQE GSYVGEVVK M KKKVLVK
Sbjct: 7 QDTEIQIAAKTQNLRRLEAQRNSLNSKVRALKDELKLLQEPGSYVGEVVKVMGKKKVLVK 66
Query: 151 VHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTY 210
+HPEGK++V++ +IDI ++P+ RV L++++Y LH+ILPNKVDPLVSLMMVEKVPDSTY
Sbjct: 67 IHPEGKYIVNLAPDIDIKKISPSLRVCLKSDTYELHQILPNKVDPLVSLMMVEKVPDSTY 126
Query: 211 EMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTE 270
+MVGGLD QIKEIKEVIELPVKHPELF++LGIAQPKGV+LYGPPGTGKTLLARAVAHHTE
Sbjct: 127 DMVGGLDQQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVAHHTE 186
Query: 271 CTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFR 330
C FIRVSGSELVQK+IGEGSRMVRELF+MA R
Sbjct: 187 CKFIRVSGSELVQKYIGEGSRMVRELFIMA-----------------------------R 217
Query: 331 EHAPSIIFMDEIDSIGSSRIESGS-GGDSEVQRTMLELLNQLDGFEATK 378
EHAPSIIFMDEIDSIGSSR+ES S GGDSEVQRTMLELLNQLDGFE++K
Sbjct: 218 EHAPSIIFMDEIDSIGSSRVESSSGGGDSEVQRTMLELLNQLDGFESSK 266
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 53/68 (77%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHTEC FIRVSGSELVQK+IGEGSRMVRELF+MAR S MD
Sbjct: 172 TGKTLLARAVAHHTECKFIRVSGSELVQKYIGEGSRMVRELFIMAREHAPS----IIFMD 227
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 228 EIDSIGSS 235
>gi|340507636|gb|EGR33568.1| hypothetical protein IMG5_049440 [Ichthyophthirius multifiliis]
Length = 395
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 195/297 (65%), Positives = 230/297 (77%), Gaps = 29/297 (9%)
Query: 81 GFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVK 140
G K YY +KIEE++L V EK N +RL+AQRNE N +VR L+EE LQ SYVG+VVK
Sbjct: 8 GLKAYYQSKIEEIRLKVNEKISNNKRLEAQRNEYNNQVRTLKEEYYSLQSPHSYVGDVVK 67
Query: 141 PMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLM 200
+ K KVLVK+ +GK+VV+IDK+I I + PN RVAL+ +SY LHKILP KVDPLVS+M
Sbjct: 68 AIGKNKVLVKISTDGKYVVNIDKSIKIEECLPNTRVALKGDSYVLHKILPTKVDPLVSMM 127
Query: 201 MVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTL 260
VEKVPDSTY+M+GGLD Q+KE+KEVIELP+KHPE+F+ALGIAQPKGVLLYGPPGTGKTL
Sbjct: 128 KVEKVPDSTYDMIGGLDQQVKEVKEVIELPIKHPEIFEALGIAQPKGVLLYGPPGTGKTL 187
Query: 261 LARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTI 320
LARA+AHHT+CTFIRVSGSELVQK+IGEG+RMVRELFVMA
Sbjct: 188 LARAIAHHTDCTFIRVSGSELVQKYIGEGARMVRELFVMA-------------------- 227
Query: 321 LTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEAT 377
R H+P +IF+DE+DSIG +RI+S GGDSEVQRTMLELLNQLDGFE T
Sbjct: 228 ---------RMHSPCLIFIDEVDSIGGARIDSDKGGDSEVQRTMLELLNQLDGFETT 275
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/46 (89%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARA+AHHT+CTFIRVSGSELVQK+IGEG+RMVRELFVMAR
Sbjct: 183 TGKTLLARAIAHHTDCTFIRVSGSELVQKYIGEGARMVRELFVMAR 228
>gi|156082451|ref|XP_001608710.1| tat-binding protein-like protein [Babesia bovis T2Bo]
gi|154795959|gb|EDO05142.1| tat-binding protein-like protein [Babesia bovis]
Length = 405
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/295 (67%), Positives = 230/295 (77%), Gaps = 30/295 (10%)
Query: 81 GFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVK 140
G YY +I + + ++ EKEQ RRL AQRNELNAKVR L++EL L E GS+VGEVVK
Sbjct: 19 GLLTYYRYRIADYEALLNEKEQTRRRLVAQRNELNAKVRALKDELHALLESGSFVGEVVK 78
Query: 141 PMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLM 200
M + KVLVK+ EGK+VVD+ K++DI+ TP+ RVAL ++SY LHKILP KVDPLV+LM
Sbjct: 79 QMCQDKVLVKISLEGKYVVDVSKDVDISKCTPSTRVALMSDSYKLHKILPTKVDPLVALM 138
Query: 201 MVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTL 260
VEKVPDSTYEMVGGL+ Q+KE+KEVIELP+KHPE+F++LGI+QPKGVLLYGPPGTGKTL
Sbjct: 139 KVEKVPDSTYEMVGGLEQQVKEVKEVIELPIKHPEIFESLGISQPKGVLLYGPPGTGKTL 198
Query: 261 LARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTI 320
LARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 199 LARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMA-------------------- 238
Query: 321 LTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
R HAPSIIFMDEIDSIGS R +SG GDSEVQRTMLELLNQLDGFE
Sbjct: 239 ---------RAHAPSIIFMDEIDSIGSQRTDSGH-GDSEVQRTMLELLNQLDGFE 283
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/97 (54%), Positives = 61/97 (62%), Gaps = 18/97 (18%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK------------ 59
+GKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMAR
Sbjct: 194 TGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMARAHAPSIIFMDEIDS 253
Query: 60 -GSSR-----GTEFFTMDVDEAIKSSEGFKPYYVTKI 90
GS R G + E + +GF+PY K+
Sbjct: 254 IGSQRTDSGHGDSEVQRTMLELLNQLDGFEPYQNIKV 290
>gi|367002462|ref|XP_003685965.1| hypothetical protein TPHA_0F00440 [Tetrapisispora phaffii CBS 4417]
gi|357524265|emb|CCE63531.1| hypothetical protein TPHA_0F00440 [Tetrapisispora phaffii CBS 4417]
Length = 403
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/299 (66%), Positives = 236/299 (78%), Gaps = 30/299 (10%)
Query: 81 GFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVK 140
G KP++ KI+E ++ V + +NLRRL+AQRN LN KVR + +EL+LLQE GSYVGEV+K
Sbjct: 15 GIKPFFEQKIQETEIKVHARTENLRRLEAQRNALNDKVRFIEDELRLLQEPGSYVGEVIK 74
Query: 141 PMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLM 200
+ K+VLVKV PEGK++VD+ +I++ ++ P+ RV L+++SY LHK+L NK DPLVSLM
Sbjct: 75 VVSDKRVLVKVQPEGKYIVDVAPDINVKELKPSQRVCLKSDSYLLHKVLDNKADPLVSLM 134
Query: 201 MVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTL 260
MVEKVPDSTY+MVGGL QI+EIKEVIELPVKHPELF++LGIAQPKGV+LYGPPGTGKTL
Sbjct: 135 MVEKVPDSTYDMVGGLTKQIREIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTL 194
Query: 261 LARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTI 320
LARAVAHHT+C FIRVSG+ELVQK+IGEGSRMVRELFVMA
Sbjct: 195 LARAVAHHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMA-------------------- 234
Query: 321 LTNTIVCNFREHAPSIIFMDEIDSIGSSRIE-SGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGSSR+E GGDSEVQRTMLELLNQLDGFE +K
Sbjct: 235 ---------REHAPSIIFMDEIDSIGSSRVEGGSGGGDSEVQRTMLELLNQLDGFETSK 284
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 53/68 (77%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+C FIRVSG+ELVQK+IGEGSRMVRELFVMAR S MD
Sbjct: 190 TGKTLLARAVAHHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMAREHAPS----IIFMD 245
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 246 EIDSIGSS 253
>gi|367015041|ref|XP_003682020.1| hypothetical protein TDEL_0E05660 [Torulaspora delbrueckii]
gi|359749681|emb|CCE92809.1| hypothetical protein TDEL_0E05660 [Torulaspora delbrueckii]
Length = 406
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 211/324 (65%), Positives = 244/324 (75%), Gaps = 37/324 (11%)
Query: 55 MARCKGSSRGTEFFTMDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNEL 114
MA SS+ T T D G +PY+ KI+E +L + K NLRRL+AQRN L
Sbjct: 1 MAAVAKSSKTTLLNTHD--------SGIRPYFEQKIQEAELKIRSKTDNLRRLEAQRNTL 52
Query: 115 NAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNC 174
N KVR +++EL+LLQE GSYVGEVVK + KKVLVKV PEGK++VDI K+I+I ++ P+
Sbjct: 53 NDKVRFIKDELRLLQEPGSYVGEVVKVVSDKKVLVKVQPEGKYIVDISKDINIKELKPSQ 112
Query: 175 RVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHP 234
RV L+++SY LHK+L NK DPLVSLMMVEKVPDSTY+M+GGL QIKEIKEVIELPVKHP
Sbjct: 113 RVCLKSDSYMLHKVLENKADPLVSLMMVEKVPDSTYDMLGGLTKQIKEIKEVIELPVKHP 172
Query: 235 ELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVR 294
ELF++LGI QPKGV+LYGPPGTGKTLLARAVAHHT+C FIRVSG+ELVQK+IGEGSRMVR
Sbjct: 173 ELFESLGITQPKGVILYGPPGTGKTLLARAVAHHTDCKFIRVSGAELVQKYIGEGSRMVR 232
Query: 295 ELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGS 354
ELFVMA REHAPSIIFMDEIDSIGSSR+E
Sbjct: 233 ELFVMA-----------------------------REHAPSIIFMDEIDSIGSSRVEGSG 263
Query: 355 GGDSEVQRTMLELLNQLDGFEATK 378
GGDSEVQRTMLELLNQLDGFE +K
Sbjct: 264 GGDSEVQRTMLELLNQLDGFETSK 287
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 53/68 (77%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+C FIRVSG+ELVQK+IGEGSRMVRELFVMAR S MD
Sbjct: 194 TGKTLLARAVAHHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMAREHAPS----IIFMD 249
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 250 EIDSIGSS 257
>gi|336364144|gb|EGN92507.1| hypothetical protein SERLA73DRAFT_190996 [Serpula lacrymans var.
lacrymans S7.3]
gi|336388301|gb|EGO29445.1| hypothetical protein SERLADRAFT_457206 [Serpula lacrymans var.
lacrymans S7.9]
Length = 410
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 218/299 (72%), Positives = 237/299 (79%), Gaps = 30/299 (10%)
Query: 81 GFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVK 140
G K YY KIE +L++ +K QNLRRL+AQRN LNA+VR+LREELQLL E GSYVGEVVK
Sbjct: 22 GVKSYYQAKIEAAELLINQKTQNLRRLEAQRNALNARVRLLREELQLLHEPGSYVGEVVK 81
Query: 141 PMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLM 200
M K KVLVKV PEGK++VD+D IDI+ +TP+ RVALR++SYT+HKILPNKVDPLVSLM
Sbjct: 82 VMGKTKVLVKVQPEGKYIVDLDSEIDISSLTPSLRVALRSDSYTIHKILPNKVDPLVSLM 141
Query: 201 MVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTL 260
MVEKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELF+ALGIAQPKGVLLYGPPGTGKTL
Sbjct: 142 MVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTL 201
Query: 261 LARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTI 320
LARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 202 LARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMA-------------------- 241
Query: 321 LTNTIVCNFREHAPSIIFMDEID-SIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEID S GGDSEVQRTMLELLNQLDGFE TK
Sbjct: 242 ---------REHAPSIIFMDEIDSIGSSRGESGSGGGDSEVQRTMLELLNQLDGFEPTK 291
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 42/46 (91%), Positives = 45/46 (97%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMAR
Sbjct: 197 TGKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAR 242
>gi|302677713|ref|XP_003028539.1| hypothetical protein SCHCODRAFT_85835 [Schizophyllum commune H4-8]
gi|300102228|gb|EFI93636.1| hypothetical protein SCHCODRAFT_85835 [Schizophyllum commune H4-8]
Length = 401
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 217/299 (72%), Positives = 240/299 (80%), Gaps = 30/299 (10%)
Query: 81 GFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVK 140
G K YY KIE +L++ +K QNLRRL+AQRN LNA+VR+LREELQLL E GSYVGEVVK
Sbjct: 13 GIKAYYQAKIEAAELLINQKTQNLRRLEAQRNALNARVRLLREELQLLHEPGSYVGEVVK 72
Query: 141 PMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLM 200
M K KVLVKV PEGK++VD+D +ID+N +TP+ RVALR++SYT+HKILPNKVDPLVSLM
Sbjct: 73 VMGKTKVLVKVQPEGKYIVDVDSDIDVNTLTPSLRVALRSDSYTIHKILPNKVDPLVSLM 132
Query: 201 MVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTL 260
MVEKVP+STYEMVGGLD QIKEIKEVIELPVKHPELF++LGIAQPKGVLLYGPPGTGKTL
Sbjct: 133 MVEKVPESTYEMVGGLDKQIKEIKEVIELPVKHPELFESLGIAQPKGVLLYGPPGTGKTL 192
Query: 261 LARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTI 320
LARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 193 LARAVAHHTDCRFIRVSGSELVQKYIGEGSRMVRELFVMA-------------------- 232
Query: 321 LTNTIVCNFREHAPSIIFMDEID-SIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEID S G GGDSEVQRTMLELLNQLDGFE+TK
Sbjct: 233 ---------REHAPSIIFMDEIDSIGSSRGEGGGGGGDSEVQRTMLELLNQLDGFESTK 282
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 42/46 (91%), Positives = 45/46 (97%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMAR
Sbjct: 188 TGKTLLARAVAHHTDCRFIRVSGSELVQKYIGEGSRMVRELFVMAR 233
>gi|393247165|gb|EJD54673.1| 26S proteasome regulatory complex, ATPase RPT6 [Auricularia
delicata TFB-10046 SS5]
Length = 401
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 219/305 (71%), Positives = 240/305 (78%), Gaps = 31/305 (10%)
Query: 75 AIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSY 134
A+ S E K YY KIE +L + +K QNLRRL+AQRN LNA+VR+LREELQLL E GSY
Sbjct: 8 AVPSGE-LKAYYQAKIEAAELTINQKTQNLRRLEAQRNALNARVRLLREELQLLHEPGSY 66
Query: 135 VGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVD 194
VGEVVK M K KVLVKV PEGK++VDID IDI+ +TP+ RVALR++SYT+HKILPNKVD
Sbjct: 67 VGEVVKVMGKNKVLVKVQPEGKYIVDIDSEIDISQLTPSLRVALRSDSYTIHKILPNKVD 126
Query: 195 PLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPP 254
PLVSLMMVEKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELF++LGIAQPKGVLLYGPP
Sbjct: 127 PLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFESLGIAQPKGVLLYGPP 186
Query: 255 GTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLF 314
GTGKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 187 GTGKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMA-------------- 232
Query: 315 WSLLTILTNTIVCNFREHAPSIIFMDEID-SIGSSRIESGSGGDSEVQRTMLELLNQLDG 373
REHAPSIIFMDEID S GGDSEVQRTMLELLNQLDG
Sbjct: 233 ---------------REHAPSIIFMDEIDSIGSSRGESGSGGGDSEVQRTMLELLNQLDG 277
Query: 374 FEATK 378
FE+T+
Sbjct: 278 FESTQ 282
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 42/46 (91%), Positives = 45/46 (97%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMAR
Sbjct: 188 TGKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAR 233
>gi|325303762|tpg|DAA34390.1| TPA_inf: 26S proteasome regulatory complex ATPase RPT6 [Amblyomma
variegatum]
Length = 225
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 192/224 (85%), Positives = 204/224 (91%), Gaps = 1/224 (0%)
Query: 58 CKGSSRGTEFFTMDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAK 117
G+ + M+VD A +G K YY+TKIEELQL+V++K QNLRRLQAQRNELNAK
Sbjct: 3 AAGAVESSAPVKMEVD-APSKGDGLKQYYITKIEELQLVVSDKTQNLRRLQAQRNELNAK 61
Query: 118 VRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVA 177
VRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDI +VTPN RVA
Sbjct: 62 VRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDIANVTPNSRVA 121
Query: 178 LRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELF 237
LRN+SYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELF
Sbjct: 122 LRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELF 181
Query: 238 DALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSEL 281
+ALGIAQPKGVLLYGPPGTGKTLLARAVAHHT+CTFIRVSGSEL
Sbjct: 182 EALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSEL 225
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 26/26 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSEL 37
+GKTLLARAVAHHT+CTFIRVSGSEL
Sbjct: 200 TGKTLLARAVAHHTDCTFIRVSGSEL 225
>gi|171683752|ref|XP_001906818.1| hypothetical protein [Podospora anserina S mat+]
gi|170941836|emb|CAP67489.1| unnamed protein product [Podospora anserina S mat+]
Length = 389
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 207/294 (70%), Positives = 234/294 (79%), Gaps = 29/294 (9%)
Query: 85 YYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDK 144
YY KIE +QL + + + LRRL+AQRN+ N++VR+LREEL LLQ+ GSYVGEVVK M
Sbjct: 6 YYHNKIESMQLEILKGQAVLRRLEAQRNDYNSRVRLLREELGLLQQPGSYVGEVVKVMGT 65
Query: 145 KKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEK 204
KKVLVKVHPEGK+VVDI ++DI +TP RV L ++SY L K+LP+ VDPLVSLMMVEK
Sbjct: 66 KKVLVKVHPEGKYVVDIADSVDITKLTPGKRVTLLSDSYKLEKMLPSSVDPLVSLMMVEK 125
Query: 205 VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 264
VPDSTY+M+GGLD QIKEIKEVIEL +KHPELF++LGIAQPKGVLLYGPPGTGKTLLARA
Sbjct: 126 VPDSTYDMIGGLDQQIKEIKEVIELGLKHPELFESLGIAQPKGVLLYGPPGTGKTLLARA 185
Query: 265 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNT 324
VAHHT+C FIRVSGSELVQK+IGEGSRMVRELF+MA
Sbjct: 186 VAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFIMA------------------------ 221
Query: 325 IVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGSSR+E SGGDSEVQRTMLELLNQLDGFE TK
Sbjct: 222 -----REHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFEPTK 270
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 53/68 (77%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELF+MAR S MD
Sbjct: 177 TGKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFIMAREHAPS----IIFMD 232
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 233 EIDSIGSS 240
>gi|340517742|gb|EGR47985.1| predicted protein [Trichoderma reesei QM6a]
Length = 389
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 205/294 (69%), Positives = 234/294 (79%), Gaps = 29/294 (9%)
Query: 85 YYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDK 144
YY KIE ++L + + + LRRL+AQRN+ N++VR+LREEL LLQ+ GSYVGEVVK M
Sbjct: 6 YYRNKIEAMKLEILKGQAALRRLEAQRNDYNSRVRLLREELGLLQQPGSYVGEVVKVMST 65
Query: 145 KKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEK 204
KKVLVKVHPEGK+VVD+ N++I+ +TP RV L ++SY L K+LP+ VDPLVSLMMVEK
Sbjct: 66 KKVLVKVHPEGKYVVDVSDNVEISKLTPGKRVTLLSDSYKLEKMLPSSVDPLVSLMMVEK 125
Query: 205 VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 264
VPDSTY+M+GGLD QIKEIKEVIEL +KHPELF++LGIAQPKGVLLYGPPGTGKTLLARA
Sbjct: 126 VPDSTYDMIGGLDQQIKEIKEVIELGLKHPELFESLGIAQPKGVLLYGPPGTGKTLLARA 185
Query: 265 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNT 324
VAHHT C FIRVSGSELVQK+IGEGSRMVRELF+MA
Sbjct: 186 VAHHTACKFIRVSGSELVQKYIGEGSRMVRELFIMA------------------------ 221
Query: 325 IVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGSSR+E SGGDSEVQRTMLELLNQLDGFE TK
Sbjct: 222 -----REHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFEPTK 270
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 52/68 (76%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT C FIRVSGSELVQK+IGEGSRMVRELF+MAR S MD
Sbjct: 177 TGKTLLARAVAHHTACKFIRVSGSELVQKYIGEGSRMVRELFIMAREHAPS----IIFMD 232
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 233 EIDSIGSS 240
>gi|302907229|ref|XP_003049600.1| 26S proteasome regulatory complex, ATPase RPT6 [Nectria
haematococca mpVI 77-13-4]
gi|256730536|gb|EEU43887.1| 26S proteasome regulatory complex, ATPase RPT6 [Nectria
haematococca mpVI 77-13-4]
Length = 389
Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust.
Identities = 206/294 (70%), Positives = 233/294 (79%), Gaps = 29/294 (9%)
Query: 85 YYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDK 144
YY KIE ++L + + + LRRL+AQRN+ N++VR+LREEL LLQ+ GSYVGEVVK M
Sbjct: 6 YYHNKIEAMKLEILKGQAALRRLEAQRNDYNSRVRLLREELGLLQQPGSYVGEVVKVMST 65
Query: 145 KKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEK 204
KKVLVKVHPEGK+VVD+ ++DI +TP RV L ++SY L K+LP+ VDPLVSLMMVEK
Sbjct: 66 KKVLVKVHPEGKYVVDVSDSVDIGKLTPGKRVTLLSDSYKLEKMLPSSVDPLVSLMMVEK 125
Query: 205 VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 264
VPDSTY+M+GGLD QIKEIKEVIEL +KHPELF++LGIAQPKGVLLYGPPGTGKTLLARA
Sbjct: 126 VPDSTYDMIGGLDQQIKEIKEVIELGLKHPELFESLGIAQPKGVLLYGPPGTGKTLLARA 185
Query: 265 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNT 324
VAHHT C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 186 VAHHTACKFIRVSGSELVQKYIGEGSRMVRELFVMA------------------------ 221
Query: 325 IVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGSSR+E SGGDSEVQRTMLELLNQLDGFE TK
Sbjct: 222 -----REHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFEPTK 270
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 52/68 (76%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT C FIRVSGSELVQK+IGEGSRMVRELFVMAR S MD
Sbjct: 177 TGKTLLARAVAHHTACKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPS----IIFMD 232
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 233 EIDSIGSS 240
>gi|170107177|ref|XP_001884799.1| 26S proteasome regulatory complex, ATPase RPT6 [Laccaria bicolor
S238N-H82]
gi|164640361|gb|EDR04627.1| 26S proteasome regulatory complex, ATPase RPT6 [Laccaria bicolor
S238N-H82]
Length = 401
Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust.
Identities = 215/299 (71%), Positives = 235/299 (78%), Gaps = 30/299 (10%)
Query: 81 GFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVK 140
G K YY KIE ++++ +K QNLRRL+AQRN LNA+VR+LREELQLL E GSYVGEV+K
Sbjct: 13 GVKSYYQAKIESAEILINQKTQNLRRLEAQRNALNARVRLLREELQLLHEPGSYVGEVIK 72
Query: 141 PMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLM 200
M K KVLVKV PEGK++VD+D IDIN + RVALR++SYT+HKILPNKVDPLVSLM
Sbjct: 73 VMGKNKVLVKVQPEGKYIVDLDSEIDINSLKATLRVALRSDSYTIHKILPNKVDPLVSLM 132
Query: 201 MVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTL 260
MVEKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELF+ALGIAQPKGVLLYGPPGTGKTL
Sbjct: 133 MVEKVPDSTYEMVGGLDQQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTL 192
Query: 261 LARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTI 320
LARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 193 LARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMA-------------------- 232
Query: 321 LTNTIVCNFREHAPSIIFMDEID-SIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEID S GGDSEVQRTMLELLNQLDGFE+TK
Sbjct: 233 ---------REHAPSIIFMDEIDSIGSSRGESGSGGGDSEVQRTMLELLNQLDGFESTK 282
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 42/46 (91%), Positives = 45/46 (97%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMAR
Sbjct: 188 TGKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAR 233
>gi|429856756|gb|ELA31652.1| 26s protease regulatory subunit 8 [Colletotrichum gloeosporioides
Nara gc5]
Length = 389
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 207/294 (70%), Positives = 233/294 (79%), Gaps = 29/294 (9%)
Query: 85 YYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDK 144
YY KIE ++L + + + LRRL+AQRN+ N++VR+LREEL LLQ+ GSYVGEVVK M
Sbjct: 6 YYQNKIEAMKLEILKGQAVLRRLEAQRNDYNSRVRLLREELGLLQQPGSYVGEVVKVMST 65
Query: 145 KKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEK 204
KKVLVKVHPEGK+VVDI N+DI +T RV L ++SY L K+LP+ VDPLVSLMMVEK
Sbjct: 66 KKVLVKVHPEGKYVVDISDNVDITKLTVGKRVTLLSDSYKLEKMLPSSVDPLVSLMMVEK 125
Query: 205 VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 264
VPDSTY+M+GGLD QIKEIKEVIEL +KHPELF++LGIAQPKGVLLYGPPGTGKTLLARA
Sbjct: 126 VPDSTYDMIGGLDQQIKEIKEVIELGLKHPELFESLGIAQPKGVLLYGPPGTGKTLLARA 185
Query: 265 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNT 324
VAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 186 VAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMA------------------------ 221
Query: 325 IVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGSSR+E SGGDSEVQRTMLELLNQLDGFE TK
Sbjct: 222 -----REHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFEPTK 270
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 53/68 (77%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMAR S MD
Sbjct: 177 TGKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPS----IIFMD 232
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 233 EIDSIGSS 240
>gi|358378367|gb|EHK16049.1| hypothetical protein TRIVIDRAFT_184509 [Trichoderma virens Gv29-8]
gi|358397132|gb|EHK46507.1| ATPase Rpt6 of the 19S regulatory particle of the 26S proteasome
[Trichoderma atroviride IMI 206040]
Length = 389
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 205/294 (69%), Positives = 233/294 (79%), Gaps = 29/294 (9%)
Query: 85 YYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDK 144
YY KIE ++L + + + LRRL+AQRN+ N++VR+LREEL LLQ+ GSYVGEVVK M
Sbjct: 6 YYRNKIEAMKLEILKGQAALRRLEAQRNDYNSRVRLLREELGLLQQPGSYVGEVVKVMST 65
Query: 145 KKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEK 204
KKVLVKVHPEGK+VVD+ N++I +TP RV L ++SY L K+LP+ VDPLVSLMMVEK
Sbjct: 66 KKVLVKVHPEGKYVVDVSDNVEIAKLTPGKRVTLLSDSYKLEKMLPSSVDPLVSLMMVEK 125
Query: 205 VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 264
VPDSTY+M+GGLD QIKEIKEVIEL +KHPELF++LGIAQPKGVLLYGPPGTGKTLLARA
Sbjct: 126 VPDSTYDMIGGLDQQIKEIKEVIELGLKHPELFESLGIAQPKGVLLYGPPGTGKTLLARA 185
Query: 265 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNT 324
VAHHT C FIRVSGSELVQK+IGEGSRMVRELF+MA
Sbjct: 186 VAHHTACKFIRVSGSELVQKYIGEGSRMVRELFIMA------------------------ 221
Query: 325 IVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGSSR+E SGGDSEVQRTMLELLNQLDGFE TK
Sbjct: 222 -----REHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFEPTK 270
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 52/68 (76%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT C FIRVSGSELVQK+IGEGSRMVRELF+MAR S MD
Sbjct: 177 TGKTLLARAVAHHTACKFIRVSGSELVQKYIGEGSRMVRELFIMAREHAPS----IIFMD 232
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 233 EIDSIGSS 240
>gi|342871467|gb|EGU74064.1| hypothetical protein FOXB_15454 [Fusarium oxysporum Fo5176]
Length = 389
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 205/294 (69%), Positives = 233/294 (79%), Gaps = 29/294 (9%)
Query: 85 YYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDK 144
YY KIE ++L + + + LRRL+AQRN+ N++VR+LREEL LLQ+ GSYVGEVVK M
Sbjct: 6 YYHNKIEAMKLEILKGQAALRRLEAQRNDYNSRVRLLREELGLLQQPGSYVGEVVKVMST 65
Query: 145 KKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEK 204
KK+LVKVHPEGK+VVD+ ++DI +TP RV L ++SY L K+LP+ VDPLVSLMMVEK
Sbjct: 66 KKILVKVHPEGKYVVDVSDSVDIGKLTPGKRVTLLSDSYKLEKMLPSSVDPLVSLMMVEK 125
Query: 205 VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 264
VPDSTY+M+GGLD QIKEIKEVIEL +KHPELF++LGIAQPKGVLLYGPPGTGKTLLARA
Sbjct: 126 VPDSTYDMIGGLDQQIKEIKEVIELGLKHPELFESLGIAQPKGVLLYGPPGTGKTLLARA 185
Query: 265 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNT 324
VAHHT C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 186 VAHHTACKFIRVSGSELVQKYIGEGSRMVRELFVMA------------------------ 221
Query: 325 IVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGSSR+E SGGDSEVQRTMLELLNQLDGFE TK
Sbjct: 222 -----REHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFEPTK 270
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 52/68 (76%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT C FIRVSGSELVQK+IGEGSRMVRELFVMAR S MD
Sbjct: 177 TGKTLLARAVAHHTACKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPS----IIFMD 232
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 233 EIDSIGSS 240
>gi|115388861|ref|XP_001211936.1| 26S protease regulatory subunit 8 [Aspergillus terreus NIH2624]
gi|114196020|gb|EAU37720.1| 26S protease regulatory subunit 8 [Aspergillus terreus NIH2624]
Length = 389
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 207/294 (70%), Positives = 234/294 (79%), Gaps = 29/294 (9%)
Query: 85 YYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDK 144
YY KIE ++L + + + LRRL+AQRN+ N++VR+LREEL LLQ+ GSYVGEVVK M
Sbjct: 6 YYRNKIESMKLEIIQGQAVLRRLEAQRNDYNSRVRLLREELGLLQQPGSYVGEVVKVMST 65
Query: 145 KKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEK 204
KKVLVKVHPEGK+VVDI +DI+ +T RVAL ++SY L K+LP+ VDPLVSLMMVEK
Sbjct: 66 KKVLVKVHPEGKYVVDIADGVDISKLTVGKRVALLSDSYKLEKMLPSSVDPLVSLMMVEK 125
Query: 205 VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 264
VPDSTY+M+GGLD QIKEIKEVIEL +KHPELF++LGIAQPKGVLLYGPPGTGKTLLARA
Sbjct: 126 VPDSTYDMIGGLDQQIKEIKEVIELGLKHPELFESLGIAQPKGVLLYGPPGTGKTLLARA 185
Query: 265 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNT 324
VAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 186 VAHHTDCRFIRVSGSELVQKYIGEGSRMVRELFVMA------------------------ 221
Query: 325 IVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGSSRI+S GGDSEVQRTMLELLNQLDGFE TK
Sbjct: 222 -----REHAPSIIFMDEIDSIGSSRIDSAGGGDSEVQRTMLELLNQLDGFEPTK 270
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 53/68 (77%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMAR S MD
Sbjct: 177 TGKTLLARAVAHHTDCRFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPS----IIFMD 232
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 233 EIDSIGSS 240
>gi|449543757|gb|EMD34732.1| hypothetical protein CERSUDRAFT_86159 [Ceriporiopsis subvermispora
B]
Length = 401
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 216/299 (72%), Positives = 236/299 (78%), Gaps = 30/299 (10%)
Query: 81 GFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVK 140
G K YY KIE +L + +K QNLRRL+AQRN LNA+VR+LREELQLL E GSYVGEVVK
Sbjct: 13 GIKAYYQAKIEAAELEINQKTQNLRRLEAQRNALNARVRLLREELQLLHEPGSYVGEVVK 72
Query: 141 PMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLM 200
M K KVLVKV PEGK++VD D +ID+ +TP+ RVALR++SYT+HKILPNKVDPLVSLM
Sbjct: 73 VMGKNKVLVKVQPEGKYIVDFDADIDVASLTPSLRVALRSDSYTIHKILPNKVDPLVSLM 132
Query: 201 MVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTL 260
MVEKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELF++LGIAQPKGVLLYGPPGTGKTL
Sbjct: 133 MVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFESLGIAQPKGVLLYGPPGTGKTL 192
Query: 261 LARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTI 320
LARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 193 LARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMA-------------------- 232
Query: 321 LTNTIVCNFREHAPSIIFMDEID-SIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEID S GGDSEVQRTMLELLNQLDGFE+TK
Sbjct: 233 ---------REHAPSIIFMDEIDSIGSSRGESGSGGGDSEVQRTMLELLNQLDGFESTK 282
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 42/46 (91%), Positives = 45/46 (97%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMAR
Sbjct: 188 TGKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAR 233
>gi|296411170|ref|XP_002835307.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629084|emb|CAZ79464.1| unnamed protein product [Tuber melanosporum]
Length = 389
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 204/298 (68%), Positives = 235/298 (78%), Gaps = 29/298 (9%)
Query: 81 GFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVK 140
++ KIE L+L + E+ LRRL+AQRN+ N++VR+LREEL LLQ+ GSYVGEVVK
Sbjct: 2 ALNSFFHNKIESLELEIIERNSKLRRLEAQRNDYNSRVRLLREELGLLQQPGSYVGEVVK 61
Query: 141 PMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLM 200
M K+VLVKVHPEGK+VVD+ ++DI+ +TP RV L +++Y L K+LP+ VDPLVSLM
Sbjct: 62 VMGSKRVLVKVHPEGKYVVDVADSVDISKLTPGKRVTLLSDTYRLEKMLPSSVDPLVSLM 121
Query: 201 MVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTL 260
MVEKVPDSTY+M+GGLD QIKEIKEVIEL +KHPELF++LGIAQPKGVLLYGPPGTGKTL
Sbjct: 122 MVEKVPDSTYDMIGGLDQQIKEIKEVIELGLKHPELFESLGIAQPKGVLLYGPPGTGKTL 181
Query: 261 LARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTI 320
LARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 182 LARAVAHHTDCRFIRVSGSELVQKYIGEGSRMVRELFVMA-------------------- 221
Query: 321 LTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGSSR+E SGGDSEVQRTMLELLNQLDGFE TK
Sbjct: 222 ---------REHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFEPTK 270
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 53/68 (77%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMAR S MD
Sbjct: 177 TGKTLLARAVAHHTDCRFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPS----IIFMD 232
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 233 EIDSIGSS 240
>gi|310795736|gb|EFQ31197.1| 26S proteasome subunit P45 family protein [Glomerella graminicola
M1.001]
gi|380487258|emb|CCF38155.1| 26S protease regulatory subunit 8 [Colletotrichum higginsianum]
Length = 389
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 206/294 (70%), Positives = 233/294 (79%), Gaps = 29/294 (9%)
Query: 85 YYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDK 144
YY KIE ++L + + + LRRL+AQRN+ N++VR+LREEL LLQ+ GSYVGEVVK M
Sbjct: 6 YYQNKIEAMKLEILKGQAVLRRLEAQRNDYNSRVRLLREELGLLQQPGSYVGEVVKVMST 65
Query: 145 KKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEK 204
KKVLVKVHPEGK+VVD+ N+DI +T RV L ++SY L K+LP+ VDPLVSLMMVEK
Sbjct: 66 KKVLVKVHPEGKYVVDVSDNVDITKLTVGKRVTLLSDSYKLEKMLPSSVDPLVSLMMVEK 125
Query: 205 VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 264
VPDSTY+M+GGLD QIKEIKEVIEL +KHPELF++LGIAQPKGVLLYGPPGTGKTLLARA
Sbjct: 126 VPDSTYDMIGGLDQQIKEIKEVIELGLKHPELFESLGIAQPKGVLLYGPPGTGKTLLARA 185
Query: 265 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNT 324
VAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 186 VAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMA------------------------ 221
Query: 325 IVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGSSR+E SGGDSEVQRTMLELLNQLDGFE TK
Sbjct: 222 -----REHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFEPTK 270
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 53/68 (77%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMAR S MD
Sbjct: 177 TGKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPS----IIFMD 232
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 233 EIDSIGSS 240
>gi|167378436|ref|XP_001734800.1| 26S protease regulatory subunit [Entamoeba dispar SAW760]
gi|165903522|gb|EDR29030.1| 26S protease regulatory subunit, putative [Entamoeba dispar SAW760]
Length = 398
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 195/294 (66%), Positives = 229/294 (77%), Gaps = 29/294 (9%)
Query: 85 YYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDK 144
YY KI+++ + + QN RRL ++RN+LN +VR ++EELQLL E VGEV+K + K
Sbjct: 15 YYKHKIDQMTYEYSSELQNQRRLISKRNQLNDQVRRMKEELQLLSEPSCSVGEVIKAVGK 74
Query: 145 KKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEK 204
KVLVK EGK+VV ++ IDI + PN RVAL++++Y++ K+LPN+VDPLVSLM VEK
Sbjct: 75 DKVLVKSAQEGKYVVKVEAGIDIKSLKPNQRVALKSDTYSICKVLPNQVDPLVSLMRVEK 134
Query: 205 VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 264
VPDSTY+M+GGLD QIKEIKEVIELP+KHPELF++LGIAQPKGVLLYGPPGTGKTLLARA
Sbjct: 135 VPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARA 194
Query: 265 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNT 324
VAHHT+CTFIRVSG+ELVQK+IGEGSRMVRELFVMA
Sbjct: 195 VAHHTDCTFIRVSGTELVQKYIGEGSRMVRELFVMA------------------------ 230
Query: 325 IVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGSSRIE SGGDSEVQRTMLEL+NQLDGFE TK
Sbjct: 231 -----REHAPSIIFMDEIDSIGSSRIEGKSGGDSEVQRTMLELVNQLDGFEPTK 279
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+CTFIRVSG+ELVQK+IGEGSRMVRELFVMAR S MD
Sbjct: 186 TGKTLLARAVAHHTDCTFIRVSGTELVQKYIGEGSRMVRELFVMAREHAPS----IIFMD 241
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 242 EIDSIGSS 249
>gi|85068355|ref|XP_963354.1| 26S protease regulatory subunit 8 [Neurospora crassa OR74A]
gi|7800937|emb|CAB91305.1| probable 26S protease subunit RPT6 [Neurospora crassa]
gi|28925031|gb|EAA34118.1| 26S protease regulatory subunit 8 [Neurospora crassa OR74A]
gi|336468690|gb|EGO56853.1| hypothetical protein NEUTE1DRAFT_117508 [Neurospora tetrasperma
FGSC 2508]
gi|350289032|gb|EGZ70257.1| 26S protease regulatory subunit 8 [Neurospora tetrasperma FGSC
2509]
Length = 389
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 206/294 (70%), Positives = 233/294 (79%), Gaps = 29/294 (9%)
Query: 85 YYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDK 144
YY KIE ++L + + + LRRL+AQRN+ N++VR+LREEL LLQ+ GSYVGEVVK M
Sbjct: 6 YYHNKIEAMKLEILKGQAVLRRLEAQRNDYNSRVRLLREELGLLQQPGSYVGEVVKVMST 65
Query: 145 KKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEK 204
KKVLVKVHPEGK+VVD+ N+DI +T RV L ++SY L K+LP+ VDPLVSLMMVEK
Sbjct: 66 KKVLVKVHPEGKYVVDVSDNVDITKLTVGKRVTLLSDSYKLEKMLPSSVDPLVSLMMVEK 125
Query: 205 VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 264
VPDSTY+M+GGLD QIKEIKEVIEL +KHPELF++LGIAQPKGVLLYGPPGTGKTLLARA
Sbjct: 126 VPDSTYDMIGGLDQQIKEIKEVIELGLKHPELFESLGIAQPKGVLLYGPPGTGKTLLARA 185
Query: 265 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNT 324
VAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 186 VAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMA------------------------ 221
Query: 325 IVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGSSR+E SGGDSEVQRTMLELLNQLDGFE TK
Sbjct: 222 -----REHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFEPTK 270
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 53/68 (77%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMAR S MD
Sbjct: 177 TGKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPS----IIFMD 232
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 233 EIDSIGSS 240
>gi|409047494|gb|EKM56973.1| hypothetical protein PHACADRAFT_119097 [Phanerochaete carnosa
HHB-10118-sp]
Length = 400
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 215/299 (71%), Positives = 236/299 (78%), Gaps = 30/299 (10%)
Query: 81 GFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVK 140
G K YY KIE +L++ +K QNLRRL+AQRN LNA+VR+LREELQLL E GSYVGEVVK
Sbjct: 12 GLKSYYQAKIEAAELLINQKTQNLRRLEAQRNALNARVRLLREELQLLHEPGSYVGEVVK 71
Query: 141 PMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLM 200
M K KVLVKV PEGK++VD D I+IN +TP+ RVALR+++YT+HKILPNKVDPLVSLM
Sbjct: 72 AMGKNKVLVKVQPEGKYIVDTDSEININLLTPSLRVALRSDTYTIHKILPNKVDPLVSLM 131
Query: 201 MVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTL 260
MVEKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELF++LGIAQPKGVLLYGPPGTGKTL
Sbjct: 132 MVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFESLGIAQPKGVLLYGPPGTGKTL 191
Query: 261 LARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTI 320
LARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 192 LARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMA-------------------- 231
Query: 321 LTNTIVCNFREHAPSIIFMDEID-SIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEID S GGDSEVQRTMLELLNQLDGFE +K
Sbjct: 232 ---------REHAPSIIFMDEIDSIGSSRGESGSGGGDSEVQRTMLELLNQLDGFEPSK 281
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 42/46 (91%), Positives = 45/46 (97%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMAR
Sbjct: 187 TGKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAR 232
>gi|219127011|ref|XP_002183738.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217404975|gb|EEC44920.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 403
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 209/305 (68%), Positives = 236/305 (77%), Gaps = 32/305 (10%)
Query: 74 EAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGS 133
+A SS G YY +KI EL+ V E+ +L RLQA+RNE+NA VRMLREEL LQE GS
Sbjct: 12 DATGSSTG--KYYASKIAELRETVQERSADLLRLQARRNEINAHVRMLREELYHLQEPGS 69
Query: 134 YVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKV 193
YVGEVVKPM K+LVK++PEGK++VD+DK+IDI PN RVALRN+SYTLHKILP KV
Sbjct: 70 YVGEVVKPMGLNKILVKINPEGKYIVDLDKDIDIQSCQPNTRVALRNDSYTLHKILPTKV 129
Query: 194 DPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGP 253
DPLVSLM VE VPDSTY+M+GGL+ Q+ EIKEVIELP+KHPELF++LG+AQPKGVLLYGP
Sbjct: 130 DPLVSLMKVEAVPDSTYDMIGGLEKQVMEIKEVIELPIKHPELFESLGVAQPKGVLLYGP 189
Query: 254 PGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLL 313
PGTGKTLLARAVAHHT+CTFIRVSG+ELVQK+IGEGSRMVRELFVMA
Sbjct: 190 PGTGKTLLARAVAHHTDCTFIRVSGAELVQKYIGEGSRMVRELFVMA------------- 236
Query: 314 FWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDG 373
RE APSIIFMDEIDSIG SR SG G SEVQRTMLELLNQLDG
Sbjct: 237 ----------------REAAPSIIFMDEIDSIGQSRGGSGGGD-SEVQRTMLELLNQLDG 279
Query: 374 FEATK 378
FE +
Sbjct: 280 FEPAQ 284
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/46 (91%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+CTFIRVSG+ELVQK+IGEGSRMVRELFVMAR
Sbjct: 192 TGKTLLARAVAHHTDCTFIRVSGAELVQKYIGEGSRMVRELFVMAR 237
>gi|400598235|gb|EJP65952.1| 26S proteasome regulatory complex, ATPase RPT6 [Beauveria bassiana
ARSEF 2860]
Length = 389
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 205/294 (69%), Positives = 232/294 (78%), Gaps = 29/294 (9%)
Query: 85 YYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDK 144
YY KIE ++L + + + LRRL+AQRN+ N++VR+LREEL LLQ+ GSYVGEVVK M
Sbjct: 6 YYHNKIEAMKLEILKGQAALRRLEAQRNDYNSRVRLLREELGLLQQPGSYVGEVVKVMGT 65
Query: 145 KKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEK 204
KKVLVKVHPEGK+VVDI N+D+ +T RV L ++SY L K+LP+ VDPLVSLMMVEK
Sbjct: 66 KKVLVKVHPEGKYVVDISDNVDVTKLTAGKRVTLLSDSYKLEKMLPSSVDPLVSLMMVEK 125
Query: 205 VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 264
VPDSTY+M+GGLD QIKEIKEVIEL +KHPELF++LGIAQPKGVLLYGPPGTGKTLLARA
Sbjct: 126 VPDSTYDMIGGLDQQIKEIKEVIELGLKHPELFESLGIAQPKGVLLYGPPGTGKTLLARA 185
Query: 265 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNT 324
VAHHT C FIRVSGSELVQK+IGEGSRMVRELF+MA
Sbjct: 186 VAHHTACKFIRVSGSELVQKYIGEGSRMVRELFIMA------------------------ 221
Query: 325 IVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGSSR+E SGGDSEVQRTMLELLNQLDGFE TK
Sbjct: 222 -----REHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFEPTK 270
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/98 (52%), Positives = 59/98 (60%), Gaps = 19/98 (19%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA--------------- 56
+GKTLLARAVAHHT C FIRVSGSELVQK+IGEGSRMVRELF+MA
Sbjct: 177 TGKTLLARAVAHHTACKFIRVSGSELVQKYIGEGSRMVRELFIMAREHAPSIIFMDEIDS 236
Query: 57 ----RCKGSSRGTEFFTMDVDEAIKSSEGFKPYYVTKI 90
R +GSS G + E + +GF+P KI
Sbjct: 237 IGSSRVEGSSGGDSEVQRTMLELLNQLDGFEPTKNIKI 274
>gi|428672564|gb|EKX73477.1| 26S protease regulatory subunit, putative [Babesia equi]
Length = 395
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 200/306 (65%), Positives = 232/306 (75%), Gaps = 33/306 (10%)
Query: 70 MDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQ 129
MD EA+ G YY KIE+ + ++++K RL+AQRNELN +VR L++ELQ L
Sbjct: 1 MDSSEAVC---GLISYYRHKIEDCEALLSQKLATRSRLEAQRNELNTRVRELKDELQCLL 57
Query: 130 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKIL 189
+ GS+VGEVVK M + KVLVK+ EGK+VVD+ +IDI TPN RVAL +SY LHKIL
Sbjct: 58 DSGSFVGEVVKVMCEDKVLVKISLEGKYVVDVASDIDITKCTPNTRVALMTDSYKLHKIL 117
Query: 190 PNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVL 249
P KVDPLV+LM VEKVPDSTY+MVGGLD Q+K++KEVIELP+KHPE+F++LGI+QPKGVL
Sbjct: 118 PTKVDPLVALMKVEKVPDSTYDMVGGLDEQVKQVKEVIELPIKHPEIFESLGISQPKGVL 177
Query: 250 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAH 309
LYGPPGTGKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 178 LYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMA--------- 228
Query: 310 HPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN 369
R HAPSIIFMDEIDSIGS R +S S GDSEVQRTMLELLN
Sbjct: 229 --------------------RSHAPSIIFMDEIDSIGSQRSDS-SHGDSEVQRTMLELLN 267
Query: 370 QLDGFE 375
QLDGFE
Sbjct: 268 QLDGFE 273
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/97 (53%), Positives = 60/97 (61%), Gaps = 18/97 (18%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKG----------- 60
+GKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMAR
Sbjct: 184 TGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMARSHAPSIIFMDEIDS 243
Query: 61 -------SSRGTEFFTMDVDEAIKSSEGFKPYYVTKI 90
SS G + E + +GF+PY K+
Sbjct: 244 IGSQRSDSSHGDSEVQRTMLELLNQLDGFEPYQNIKV 280
>gi|395331178|gb|EJF63559.1| endopeptidase [Dichomitus squalens LYAD-421 SS1]
Length = 401
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 215/301 (71%), Positives = 235/301 (78%), Gaps = 30/301 (9%)
Query: 79 SEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEV 138
S G YY KIE +L + +K QNLRRL+AQRN LNA+VR+LREELQLL E GSYVGEV
Sbjct: 11 SSGLSSYYQAKIEAAELEINQKTQNLRRLEAQRNALNARVRLLREELQLLHEPGSYVGEV 70
Query: 139 VKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVS 198
VK M K KVLVKV PEGK++VD D ID+ +TP+ R+ALR++SYT+HKILPNKVDPLVS
Sbjct: 71 VKVMGKNKVLVKVQPEGKYIVDFDSEIDVASLTPSLRIALRSDSYTIHKILPNKVDPLVS 130
Query: 199 LMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGK 258
LMMVEKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELF++LGIAQPKGVLLYGPPGTGK
Sbjct: 131 LMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFESLGIAQPKGVLLYGPPGTGK 190
Query: 259 TLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLL 318
TLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 191 TLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMA------------------ 232
Query: 319 TILTNTIVCNFREHAPSIIFMDEID-SIGSSRIESGSGGDSEVQRTMLELLNQLDGFEAT 377
REHAPSIIFMDEID S GGDSEVQRTMLELLNQLDGFE+T
Sbjct: 233 -----------REHAPSIIFMDEIDSIGSSRGESGSGGGDSEVQRTMLELLNQLDGFEST 281
Query: 378 K 378
K
Sbjct: 282 K 282
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 42/46 (91%), Positives = 45/46 (97%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMAR
Sbjct: 188 TGKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAR 233
>gi|121714277|ref|XP_001274749.1| proteasome regulatory particle subunit Rpt6, putative [Aspergillus
clavatus NRRL 1]
gi|119402903|gb|EAW13323.1| proteasome regulatory particle subunit Rpt6, putative [Aspergillus
clavatus NRRL 1]
Length = 389
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 206/294 (70%), Positives = 233/294 (79%), Gaps = 29/294 (9%)
Query: 85 YYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDK 144
YY KIE ++L + + + LRRL+AQRN+ N++VR+LREEL LLQ+ GSYVGEVVK M
Sbjct: 6 YYRNKIESMKLEIIQGQAVLRRLEAQRNDYNSRVRLLREELGLLQQPGSYVGEVVKVMST 65
Query: 145 KKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEK 204
KKVLVKVHPEGK+VVDI + +DI +T RVAL ++SY L K+LP+ VDPLVSLMMVEK
Sbjct: 66 KKVLVKVHPEGKYVVDIAEGVDITKLTVGKRVALLSDSYKLEKMLPSSVDPLVSLMMVEK 125
Query: 205 VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 264
VPDSTY+M+GGLD QIKEIKEVIEL +KHPELF++LGIAQPKGVLLYGPPGTGKTLLARA
Sbjct: 126 VPDSTYDMIGGLDQQIKEIKEVIELGLKHPELFESLGIAQPKGVLLYGPPGTGKTLLARA 185
Query: 265 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNT 324
VAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 186 VAHHTDCRFIRVSGSELVQKYIGEGSRMVRELFVMA------------------------ 221
Query: 325 IVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGSSRI+S GDSEVQRTMLELLNQLDGFE TK
Sbjct: 222 -----REHAPSIIFMDEIDSIGSSRIDSAGSGDSEVQRTMLELLNQLDGFEPTK 270
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 53/68 (77%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMAR S MD
Sbjct: 177 TGKTLLARAVAHHTDCRFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPS----IIFMD 232
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 233 EIDSIGSS 240
>gi|145248616|ref|XP_001400647.1| 26S protease subunit rpt4 [Aspergillus niger CBS 513.88]
gi|134081314|emb|CAK41817.1| unnamed protein product [Aspergillus niger]
gi|350639179|gb|EHA27533.1| hypothetical protein ASPNIDRAFT_53717 [Aspergillus niger ATCC 1015]
gi|358370646|dbj|GAA87257.1| proteasome regulatory particle subunit Rpt6 [Aspergillus kawachii
IFO 4308]
Length = 389
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 206/294 (70%), Positives = 233/294 (79%), Gaps = 29/294 (9%)
Query: 85 YYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDK 144
YY KIE ++L + + + LRRL+AQRN+ N++VR+LREEL LLQ+ GSYVGEVVK M
Sbjct: 6 YYRNKIESMKLEIIQGQAVLRRLEAQRNDYNSRVRLLREELGLLQQPGSYVGEVVKVMST 65
Query: 145 KKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEK 204
KKVLVKVHPEGK+VVDI +DI+ +T RVAL ++SY L K+LP+ VDPLVSLMMVEK
Sbjct: 66 KKVLVKVHPEGKYVVDIADGVDISKLTVGKRVALLSDSYKLEKMLPSSVDPLVSLMMVEK 125
Query: 205 VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 264
VPDSTY+M+GGLD QIKEIKEVIEL +KHPELF++LGIAQPKGVLLYGPPGTGKTLLARA
Sbjct: 126 VPDSTYDMIGGLDQQIKEIKEVIELGLKHPELFESLGIAQPKGVLLYGPPGTGKTLLARA 185
Query: 265 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNT 324
VAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 186 VAHHTDCRFIRVSGSELVQKYIGEGSRMVRELFVMA------------------------ 221
Query: 325 IVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGSSRI+S GDSEVQRTMLELLNQLDGFE TK
Sbjct: 222 -----REHAPSIIFMDEIDSIGSSRIDSAGSGDSEVQRTMLELLNQLDGFEPTK 270
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 53/68 (77%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMAR S MD
Sbjct: 177 TGKTLLARAVAHHTDCRFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPS----IIFMD 232
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 233 EIDSIGSS 240
>gi|392558439|gb|EIW51627.1| 26S proteasome regulatory complex ATPase RPT6 [Trametes versicolor
FP-101664 SS1]
Length = 401
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 215/301 (71%), Positives = 235/301 (78%), Gaps = 30/301 (9%)
Query: 79 SEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEV 138
+ G K YY KIE +L + +K QNLRRL+AQRN LNA+VR+LREELQLL E GSYVGEV
Sbjct: 11 ATGLKAYYQAKIEAAELEINQKTQNLRRLEAQRNALNARVRLLREELQLLHEPGSYVGEV 70
Query: 139 VKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVS 198
VK M K KVLVKV PEGK++VD D ID+ +TP+ RVALR++SYT+HKILPNK+DPLVS
Sbjct: 71 VKVMGKNKVLVKVQPEGKYIVDFDSEIDVATLTPSLRVALRSDSYTIHKILPNKIDPLVS 130
Query: 199 LMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGK 258
LMMVEKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELF++LGIAQPKGVLLYGPPGTGK
Sbjct: 131 LMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFESLGIAQPKGVLLYGPPGTGK 190
Query: 259 TLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLL 318
TLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 191 TLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMA------------------ 232
Query: 319 TILTNTIVCNFREHAPSIIFMDEID-SIGSSRIESGSGGDSEVQRTMLELLNQLDGFEAT 377
REHAPSIIFMDEID S GGDSEVQRTMLELLNQLDGFE T
Sbjct: 233 -----------REHAPSIIFMDEIDSIGSSRGESGSGGGDSEVQRTMLELLNQLDGFEPT 281
Query: 378 K 378
K
Sbjct: 282 K 282
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 42/46 (91%), Positives = 45/46 (97%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMAR
Sbjct: 188 TGKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAR 233
>gi|389740732|gb|EIM81922.1| 26S proteasome regulatory complex ATPase RPT6 [Stereum hirsutum
FP-91666 SS1]
Length = 425
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 212/299 (70%), Positives = 234/299 (78%), Gaps = 30/299 (10%)
Query: 81 GFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVK 140
G K YY KIE ++++ +K QNLRRL+AQRN LNA+VR+LREELQLL E GSYVGEVVK
Sbjct: 13 GVKSYYQAKIEAAEILINQKTQNLRRLEAQRNALNARVRLLREELQLLHEPGSYVGEVVK 72
Query: 141 PMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLM 200
M K KVLVKV PEGK++VD D+ +D+ +TP+ RVALR++SYT+HKILPNKVDPLVSLM
Sbjct: 73 VMGKNKVLVKVQPEGKYIVDFDQEVDVATLTPSLRVALRSDSYTIHKILPNKVDPLVSLM 132
Query: 201 MVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTL 260
MVEKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELF++LGIAQPKGVLLYGPPGTGKTL
Sbjct: 133 MVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFESLGIAQPKGVLLYGPPGTGKTL 192
Query: 261 LARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTI 320
LARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 193 LARAVAHHTDCRFIRVSGSELVQKYIGEGSRMVRELFVMA-------------------- 232
Query: 321 LTNTIVCNFREHAPSIIFMDEID-SIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEID S DSEVQRTMLELLNQLDGFE TK
Sbjct: 233 ---------REHAPSIIFMDEIDSIGSSRGDGGSGSSDSEVQRTMLELLNQLDGFEPTK 282
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/46 (91%), Positives = 45/46 (97%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMAR
Sbjct: 188 TGKTLLARAVAHHTDCRFIRVSGSELVQKYIGEGSRMVRELFVMAR 233
>gi|296819695|ref|XP_002849889.1| 26S protease regulatory subunit 8 [Arthroderma otae CBS 113480]
gi|238840342|gb|EEQ30004.1| 26S protease regulatory subunit 8 [Arthroderma otae CBS 113480]
Length = 389
Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust.
Identities = 206/294 (70%), Positives = 233/294 (79%), Gaps = 29/294 (9%)
Query: 85 YYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDK 144
YY KIE ++L + + + LRRL+AQRN+ N++VR+LREEL LLQ+ GSYVGEVVK M
Sbjct: 6 YYRNKIESMKLEIIQGQAVLRRLEAQRNDYNSRVRLLREELGLLQQPGSYVGEVVKVMGT 65
Query: 145 KKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEK 204
KKVLVKVHPEGK+VVDI +DI +T RV+L ++SY L K+LP+ VDPLVSLMMVEK
Sbjct: 66 KKVLVKVHPEGKYVVDIADGVDIAKLTVGKRVSLLSDSYKLEKMLPSSVDPLVSLMMVEK 125
Query: 205 VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 264
VPDSTY+M+GGLD QIKEIKEVIEL +KHPELF++LGIAQPKGVLLYGPPGTGKTLLARA
Sbjct: 126 VPDSTYDMIGGLDQQIKEIKEVIELGLKHPELFESLGIAQPKGVLLYGPPGTGKTLLARA 185
Query: 265 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNT 324
VAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 186 VAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMA------------------------ 221
Query: 325 IVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGSSR+E SGGDSEVQRTMLELLNQLDGFE TK
Sbjct: 222 -----REHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFEPTK 270
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/98 (53%), Positives = 60/98 (61%), Gaps = 19/98 (19%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA--------------- 56
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 177 TGKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDS 236
Query: 57 ----RCKGSSRGTEFFTMDVDEAIKSSEGFKPYYVTKI 90
R +GSS G + E + +GF+P KI
Sbjct: 237 IGSSRVEGSSGGDSEVQRTMLELLNQLDGFEPTKNIKI 274
>gi|242794403|ref|XP_002482365.1| proteasome regulatory particle subunit Rpt6, putative [Talaromyces
stipitatus ATCC 10500]
gi|218718953|gb|EED18373.1| proteasome regulatory particle subunit Rpt6, putative [Talaromyces
stipitatus ATCC 10500]
Length = 389
Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust.
Identities = 204/294 (69%), Positives = 234/294 (79%), Gaps = 29/294 (9%)
Query: 85 YYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDK 144
YY KIE ++L + + + LRRL+AQRN+ N++VR+LREEL LLQ+ GSYVGEVVK M
Sbjct: 6 YYRNKIESMKLEIIQGQAVLRRLEAQRNDYNSRVRLLREELGLLQQPGSYVGEVVKVMGT 65
Query: 145 KKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEK 204
KKVLVKVHPEGK+VVDI N+D++ +T RV+L +++Y L K+LP+ VDPLVSLMMVEK
Sbjct: 66 KKVLVKVHPEGKYVVDIADNVDVSKLTVGKRVSLLSDTYKLEKMLPSSVDPLVSLMMVEK 125
Query: 205 VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 264
VPDSTY+M+GGLD QIKEIKEVIEL +KHPELF++LGIAQPKGVLLYGPPGTGKTLLARA
Sbjct: 126 VPDSTYDMIGGLDQQIKEIKEVIELGLKHPELFESLGIAQPKGVLLYGPPGTGKTLLARA 185
Query: 265 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNT 324
VAHH +C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 186 VAHHADCKFIRVSGSELVQKYIGEGSRMVRELFVMA------------------------ 221
Query: 325 IVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGSSR+E SGGDSEVQRTMLELLNQLDGFE TK
Sbjct: 222 -----REHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFEPTK 270
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 52/68 (76%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHH +C FIRVSGSELVQK+IGEGSRMVRELFVMAR S MD
Sbjct: 177 TGKTLLARAVAHHADCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPS----IIFMD 232
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 233 EIDSIGSS 240
>gi|212535936|ref|XP_002148124.1| proteasome regulatory particle subunit Rpt6, putative [Talaromyces
marneffei ATCC 18224]
gi|210070523|gb|EEA24613.1| proteasome regulatory particle subunit Rpt6, putative [Talaromyces
marneffei ATCC 18224]
Length = 389
Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust.
Identities = 204/294 (69%), Positives = 234/294 (79%), Gaps = 29/294 (9%)
Query: 85 YYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDK 144
YY KIE ++L + + + LRRL+AQRN+ N++VR+LREEL LLQ+ GSYVGEVVK M
Sbjct: 6 YYRNKIESMKLEIIQGQAVLRRLEAQRNDYNSRVRLLREELGLLQQPGSYVGEVVKVMGT 65
Query: 145 KKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEK 204
KKVLVKVHPEGK+VVDI N+D++ +T RV+L +++Y L K+LP+ VDPLVSLMMVEK
Sbjct: 66 KKVLVKVHPEGKYVVDIADNVDVSKLTVGKRVSLLSDTYKLEKMLPSSVDPLVSLMMVEK 125
Query: 205 VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 264
VPDSTY+M+GGLD QIKEIKEVIEL +KHPELF++LGIAQPKGVLLYGPPGTGKTLLARA
Sbjct: 126 VPDSTYDMIGGLDQQIKEIKEVIELGLKHPELFESLGIAQPKGVLLYGPPGTGKTLLARA 185
Query: 265 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNT 324
VAHH +C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 186 VAHHADCKFIRVSGSELVQKYIGEGSRMVRELFVMA------------------------ 221
Query: 325 IVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGSSR+E SGGDSEVQRTMLELLNQLDGFE TK
Sbjct: 222 -----REHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFEPTK 270
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 51/98 (52%), Positives = 59/98 (60%), Gaps = 19/98 (19%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA--------------- 56
+GKTLLARAVAHH +C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 177 TGKTLLARAVAHHADCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDS 236
Query: 57 ----RCKGSSRGTEFFTMDVDEAIKSSEGFKPYYVTKI 90
R +GSS G + E + +GF+P KI
Sbjct: 237 IGSSRVEGSSGGDSEVQRTMLELLNQLDGFEPTKNIKI 274
>gi|70982247|ref|XP_746652.1| proteasome regulatory particle subunit Rpt6 [Aspergillus fumigatus
Af293]
gi|119486698|ref|XP_001262335.1| proteasome regulatory particle subunit Rpt6, putative [Neosartorya
fischeri NRRL 181]
gi|66844275|gb|EAL84614.1| proteasome regulatory particle subunit Rpt6, putative [Aspergillus
fumigatus Af293]
gi|119410492|gb|EAW20438.1| proteasome regulatory particle subunit Rpt6, putative [Neosartorya
fischeri NRRL 181]
gi|159122112|gb|EDP47234.1| proteasome regulatory particle subunit Rpt6, putative [Aspergillus
fumigatus A1163]
Length = 389
Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust.
Identities = 206/294 (70%), Positives = 232/294 (78%), Gaps = 29/294 (9%)
Query: 85 YYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDK 144
YY KIE ++L + + + LRRL+AQRN+ N++VR+LREEL LLQ+ GSYVGEVVK M
Sbjct: 6 YYRNKIESMKLEIIQGQAVLRRLEAQRNDYNSRVRLLREELGLLQQPGSYVGEVVKVMST 65
Query: 145 KKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEK 204
KKVLVKVHPEGK+VVDI +DI +T RVAL ++SY L K+LP+ VDPLVSLMMVEK
Sbjct: 66 KKVLVKVHPEGKYVVDIADGVDITKLTVGKRVALLSDSYKLEKMLPSSVDPLVSLMMVEK 125
Query: 205 VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 264
VPDSTY+M+GGLD QIKEIKEVIEL +KHPELF++LGIAQPKGVLLYGPPGTGKTLLARA
Sbjct: 126 VPDSTYDMIGGLDQQIKEIKEVIELGLKHPELFESLGIAQPKGVLLYGPPGTGKTLLARA 185
Query: 265 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNT 324
VAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 186 VAHHTDCRFIRVSGSELVQKYIGEGSRMVRELFVMA------------------------ 221
Query: 325 IVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGSSRI+S GDSEVQRTMLELLNQLDGFE TK
Sbjct: 222 -----REHAPSIIFMDEIDSIGSSRIDSAGSGDSEVQRTMLELLNQLDGFEPTK 270
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 53/68 (77%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMAR S MD
Sbjct: 177 TGKTLLARAVAHHTDCRFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPS----IIFMD 232
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 233 EIDSIGSS 240
>gi|67541649|ref|XP_664592.1| hypothetical protein AN6988.2 [Aspergillus nidulans FGSC A4]
gi|40742444|gb|EAA61634.1| conserved hypothetical protein [Aspergillus nidulans FGSC A4]
gi|259483704|tpe|CBF79312.1| TPA: hypothetical protein similar to proteasome p45/SUG (Broad)
[Aspergillus nidulans FGSC A4]
Length = 389
Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust.
Identities = 206/294 (70%), Positives = 232/294 (78%), Gaps = 29/294 (9%)
Query: 85 YYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDK 144
YY KIE ++L + + + LRRL+AQRN+ N++VR+LREEL LLQ+ GSYVGEVVK M
Sbjct: 6 YYRNKIESMKLEIIQGQAVLRRLEAQRNDYNSRVRLLREELGLLQQPGSYVGEVVKVMST 65
Query: 145 KKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEK 204
KKVLVKVHPEGK+VVDI +DI +T RVAL ++SY L K+LP+ VDPLVSLMMVEK
Sbjct: 66 KKVLVKVHPEGKYVVDIADGVDIGKLTVGKRVALLSDSYKLEKMLPSSVDPLVSLMMVEK 125
Query: 205 VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 264
VPDSTY+M+GGLD QIKEIKEVIEL +KHPELF++LGIAQPKGVLLYGPPGTGKTLLARA
Sbjct: 126 VPDSTYDMIGGLDQQIKEIKEVIELGLKHPELFESLGIAQPKGVLLYGPPGTGKTLLARA 185
Query: 265 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNT 324
VAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 186 VAHHTDCRFIRVSGSELVQKYIGEGSRMVRELFVMA------------------------ 221
Query: 325 IVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGSSRI+S GDSEVQRTMLELLNQLDGFE TK
Sbjct: 222 -----REHAPSIIFMDEIDSIGSSRIDSAGSGDSEVQRTMLELLNQLDGFEPTK 270
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 53/68 (77%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMAR S MD
Sbjct: 177 TGKTLLARAVAHHTDCRFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPS----IIFMD 232
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 233 EIDSIGSS 240
>gi|169784139|ref|XP_001826531.1| 26S protease subunit rpt4 [Aspergillus oryzae RIB40]
gi|238508808|ref|XP_002385587.1| proteasome regulatory particle subunit Rpt6, putative [Aspergillus
flavus NRRL3357]
gi|83775276|dbj|BAE65398.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220688479|gb|EED44832.1| proteasome regulatory particle subunit Rpt6, putative [Aspergillus
flavus NRRL3357]
gi|391868543|gb|EIT77757.1| 26S proteasome regulatory complex, ATPase RPT6 [Aspergillus oryzae
3.042]
Length = 389
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 206/294 (70%), Positives = 233/294 (79%), Gaps = 29/294 (9%)
Query: 85 YYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDK 144
YY KIE ++L + + + LRRL+AQRN+ N++VR+LREEL LLQ+ GSYVGEVVK M
Sbjct: 6 YYHNKIESMKLEIIQGQAVLRRLEAQRNDYNSRVRLLREELGLLQQPGSYVGEVVKVMST 65
Query: 145 KKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEK 204
KKVLVKVHPEGK+VVDI +DI+ +T RVAL ++SY L K+LP+ VDPLVSLMMVEK
Sbjct: 66 KKVLVKVHPEGKYVVDIADGVDISKLTVGKRVALLSDSYKLEKMLPSSVDPLVSLMMVEK 125
Query: 205 VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 264
VPDSTY+M+GGLD QIKEIKEVIEL +KHPELF++LGIAQPKGVLLYGPPGTGKTLLARA
Sbjct: 126 VPDSTYDMIGGLDQQIKEIKEVIELGLKHPELFESLGIAQPKGVLLYGPPGTGKTLLARA 185
Query: 265 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNT 324
VAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 186 VAHHTDCRFIRVSGSELVQKYIGEGSRMVRELFVMA------------------------ 221
Query: 325 IVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGSSRI+S GDSEVQRTMLELLNQLDGFE TK
Sbjct: 222 -----REHAPSIIFMDEIDSIGSSRIDSAGSGDSEVQRTMLELLNQLDGFEPTK 270
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 53/68 (77%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMAR S MD
Sbjct: 177 TGKTLLARAVAHHTDCRFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPS----IIFMD 232
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 233 EIDSIGSS 240
>gi|402078378|gb|EJT73643.1| 26S protease regulatory subunit 8 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 389
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 206/294 (70%), Positives = 233/294 (79%), Gaps = 29/294 (9%)
Query: 85 YYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDK 144
YY KIE ++L + + + LRRL+AQRN+ N++VR+LREEL LLQ+ GSYVGEVVK M
Sbjct: 6 YYHNKIEAMKLEILKGQAVLRRLEAQRNDYNSRVRLLREELGLLQQPGSYVGEVVKVMST 65
Query: 145 KKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEK 204
KKVLVKVHPEGK+VVDI ++DI +T RV L ++SY L K+LP+ VDPLVSLMMVEK
Sbjct: 66 KKVLVKVHPEGKYVVDIADSVDITKLTVGKRVTLLSDSYKLEKMLPSSVDPLVSLMMVEK 125
Query: 205 VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 264
VPDSTY+M+GGLD QIKEIKEVIEL +KHPELF++LGIAQPKGVLLYGPPGTGKTLLARA
Sbjct: 126 VPDSTYDMIGGLDQQIKEIKEVIELGLKHPELFESLGIAQPKGVLLYGPPGTGKTLLARA 185
Query: 265 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNT 324
VAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 186 VAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMA------------------------ 221
Query: 325 IVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGSSR+E SGGDSEVQRTMLELLNQLDGFE TK
Sbjct: 222 -----REHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFEPTK 270
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/98 (53%), Positives = 60/98 (61%), Gaps = 19/98 (19%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA--------------- 56
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 177 TGKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDS 236
Query: 57 ----RCKGSSRGTEFFTMDVDEAIKSSEGFKPYYVTKI 90
R +GSS G + E + +GF+P KI
Sbjct: 237 IGSSRVEGSSGGDSEVQRTMLELLNQLDGFEPTKNIKI 274
>gi|406863196|gb|EKD16244.1| 26S protease regulatory subunit 8 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 389
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 206/294 (70%), Positives = 233/294 (79%), Gaps = 29/294 (9%)
Query: 85 YYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDK 144
YY KIE ++L + + + LRRL+AQRN+ N++VR+LREEL LLQ+ GSYVGEVVK M
Sbjct: 6 YYHNKIEGMKLEIIQGQAVLRRLEAQRNDYNSRVRLLREELGLLQQPGSYVGEVVKVMGT 65
Query: 145 KKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEK 204
KKVLVKVHPEGK+VVDI N+DI+ + RV L ++SY L K+LP+ VDPLVSLMMVEK
Sbjct: 66 KKVLVKVHPEGKYVVDISDNVDISKLIVGKRVTLLSDSYKLEKMLPSSVDPLVSLMMVEK 125
Query: 205 VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 264
VPDSTY+M+GGLD QIKEIKEVIEL +KHPELF++LGIAQPKGVLLYGPPGTGKTLLARA
Sbjct: 126 VPDSTYDMIGGLDQQIKEIKEVIELGLKHPELFESLGIAQPKGVLLYGPPGTGKTLLARA 185
Query: 265 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNT 324
VAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 186 VAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMA------------------------ 221
Query: 325 IVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGSSR+E SGGDSEVQRTMLELLNQLDGFE TK
Sbjct: 222 -----REHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFEPTK 270
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 53/68 (77%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMAR S MD
Sbjct: 177 TGKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPS----IIFMD 232
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 233 EIDSIGSS 240
>gi|393219973|gb|EJD05459.1| 26S proteasome regulatory complex, ATPase RPT6 [Fomitiporia
mediterranea MF3/22]
Length = 401
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 213/299 (71%), Positives = 234/299 (78%), Gaps = 30/299 (10%)
Query: 81 GFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVK 140
G K YY KIE +L + K QNLRRL+AQRN LNA+VR+LREELQLL E GSYVGEVVK
Sbjct: 13 GIKSYYQAKIEAAELTINHKTQNLRRLEAQRNALNARVRLLREELQLLHEPGSYVGEVVK 72
Query: 141 PMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLM 200
M K KVLVKV PEGK++VD D++ID+ + P+ R+ALR++SYT+HK+LPNKVDPLVSLM
Sbjct: 73 VMGKNKVLVKVQPEGKYIVDCDQDIDVATLKPSLRIALRSDSYTVHKVLPNKVDPLVSLM 132
Query: 201 MVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTL 260
MVEKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELF+ALGIAQPKGVLLYGPPGTGKTL
Sbjct: 133 MVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTL 192
Query: 261 LARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTI 320
LARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 193 LARAVAHHTDCQFIRVSGSELVQKYIGEGSRMVRELFVMA-------------------- 232
Query: 321 LTNTIVCNFREHAPSIIFMDEID-SIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEID S GDSEVQRTMLELLNQLDGFE+TK
Sbjct: 233 ---------REHAPSIIFMDEIDSIGSSRGEGGSGSGDSEVQRTMLELLNQLDGFESTK 282
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 42/46 (91%), Positives = 45/46 (97%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMAR
Sbjct: 188 TGKTLLARAVAHHTDCQFIRVSGSELVQKYIGEGSRMVRELFVMAR 233
>gi|32400818|gb|AAP80641.1|AF475120_1 26S proteasome ATPase subunit [Triticum aestivum]
Length = 287
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 198/278 (71%), Positives = 221/278 (79%), Gaps = 31/278 (11%)
Query: 102 QNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDI 161
NL RL+AQRN+LN++VRMLREELQLLQE GSYVGEVVK M K KVLVKVHPEGK+VVD+
Sbjct: 14 HNLNRLEAQRNDLNSRVRMLREELQLLQEPGSYVGEVVKVMGKSKVLVKVHPEGKYVVDL 73
Query: 162 DKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIK 221
DK+IDI +TP+ RVALRN+SY LH ILP+KVDPLV+LM VEKVPDSTY+M+GGLD QIK
Sbjct: 74 DKSIDITKITPSTRVALRNDSYMLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIK 133
Query: 222 EIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSEL 281
EIKEVIELP+KHPELF++LGIAQPKGVLLYGPPGTGKTLLARAVAHHT+CTFIRVSGSEL
Sbjct: 134 EIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSEL 193
Query: 282 VQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDE 341
VQK+IGEGSRMVRELFVMA REHAPSIIFMDE
Sbjct: 194 VQKYIGEGSRMVRELFVMA-----------------------------REHAPSIIFMDE 224
Query: 342 IDSIGSSRIESGSGGDSEVQRTML--ELLNQLDGFEAT 377
IDSIGS+R+E G +L EL NQLDGFE +
Sbjct: 225 IDSIGSARMEFGDLAMVIAXFXVLCXELXNQLDGFEXS 262
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/46 (93%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMAR
Sbjct: 168 TGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAR 213
>gi|169599382|ref|XP_001793114.1| hypothetical protein SNOG_02510 [Phaeosphaeria nodorum SN15]
gi|160704593|gb|EAT90722.2| hypothetical protein SNOG_02510 [Phaeosphaeria nodorum SN15]
Length = 389
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 203/294 (69%), Positives = 234/294 (79%), Gaps = 29/294 (9%)
Query: 85 YYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDK 144
++ KIE ++L + + + LRRL+AQRN+ N++VR+LREEL LLQ+ GSYVGEVVK M
Sbjct: 6 FFHNKIEAMKLEIIQGQAKLRRLEAQRNDYNSRVRLLREELGLLQQPGSYVGEVVKVMGT 65
Query: 145 KKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEK 204
KKVLVKVHPEGK+VVDI ++DI+ +TP RV L ++SY L K+LP+ VDPLVSLMMVEK
Sbjct: 66 KKVLVKVHPEGKYVVDIADSVDISKLTPGKRVTLLSDSYKLEKLLPSSVDPLVSLMMVEK 125
Query: 205 VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 264
VPDSTY+M+GGLD QIKEIKEVIEL ++HPELF++LGIAQPKGVLLYGPPGTGKTLLARA
Sbjct: 126 VPDSTYDMIGGLDQQIKEIKEVIELGLQHPELFESLGIAQPKGVLLYGPPGTGKTLLARA 185
Query: 265 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNT 324
VAHH +C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 186 VAHHADCKFIRVSGSELVQKYIGEGSRMVRELFVMA------------------------ 221
Query: 325 IVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGSSR+E SGGDSEVQRTMLELLNQLDGFE TK
Sbjct: 222 -----REHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFEPTK 270
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 51/98 (52%), Positives = 59/98 (60%), Gaps = 19/98 (19%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA--------------- 56
+GKTLLARAVAHH +C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 177 TGKTLLARAVAHHADCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDS 236
Query: 57 ----RCKGSSRGTEFFTMDVDEAIKSSEGFKPYYVTKI 90
R +GSS G + E + +GF+P KI
Sbjct: 237 IGSSRVEGSSGGDSEVQRTMLELLNQLDGFEPTKNIKI 274
>gi|223994953|ref|XP_002287160.1| 26S proteasome ATPase regulatory subunit 6 [Thalassiosira
pseudonana CCMP1335]
gi|220976276|gb|EED94603.1| 26S proteasome ATPase regulatory subunit 6 [Thalassiosira
pseudonana CCMP1335]
Length = 404
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 205/298 (68%), Positives = 235/298 (78%), Gaps = 31/298 (10%)
Query: 81 GFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVK 140
G YY +KI L ++ + +L+RL+A+RNELNAKVRMLREEL LQE GSYVGEV+K
Sbjct: 19 GMDKYYFSKISALSSTISTRTSDLQRLKARRNELNAKVRMLREELYHLQEPGSYVGEVIK 78
Query: 141 PMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLM 200
M +KKVLVK++PEGK+VVDIDK+IDIND+ PN RVALRN+SYTLHKILP KVDPLVSLM
Sbjct: 79 QMGQKKVLVKINPEGKYVVDIDKDIDINDLKPNTRVALRNDSYTLHKILPTKVDPLVSLM 138
Query: 201 MVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTL 260
VE VPDSTY+M+GGL+ Q+ EIKEVIELP+KHPELF++LG+AQPKGVLLYGPPGTGKTL
Sbjct: 139 KVEAVPDSTYDMIGGLEKQVMEIKEVIELPIKHPELFESLGVAQPKGVLLYGPPGTGKTL 198
Query: 261 LARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTI 320
LARAVAHHT+CTFIRVSG+ELVQK+IGEGSRMVRELF+MA
Sbjct: 199 LARAVAHHTDCTFIRVSGAELVQKYIGEGSRMVRELFIMA-------------------- 238
Query: 321 LTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
RE +PSIIFMDEIDSIG SR G DSEVQRTMLELLNQLDGFE +
Sbjct: 239 ---------REASPSIIFMDEIDSIGQSRGGGGG--DSEVQRTMLELLNQLDGFEPAQ 285
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/46 (89%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+CTFIRVSG+ELVQK+IGEGSRMVRELF+MAR
Sbjct: 194 TGKTLLARAVAHHTDCTFIRVSGAELVQKYIGEGSRMVRELFIMAR 239
>gi|67465840|ref|XP_649078.1| 26S protease regulatory subunit [Entamoeba histolytica HM-1:IMSS]
gi|56465447|gb|EAL43703.1| 26S protease regulatory subunit, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449710816|gb|EMD49819.1| 26S protease regulatory subunit, putative [Entamoeba histolytica
KU27]
Length = 398
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/294 (65%), Positives = 228/294 (77%), Gaps = 29/294 (9%)
Query: 85 YYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDK 144
YY KI+E+ + QN RRL ++RN+LN +VR ++EELQLL E VGEV++ + K
Sbjct: 15 YYKHKIDEMTYEYCTELQNQRRLISKRNQLNDQVRRMKEELQLLSEPSCSVGEVIRAVGK 74
Query: 145 KKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEK 204
KVLVK EGK+VV ++ IDI + PN RVAL++++Y++ K+LPN+VDPL+SLM VEK
Sbjct: 75 DKVLVKSTQEGKYVVKVEAGIDIRALKPNQRVALKSDTYSICKVLPNQVDPLISLMRVEK 134
Query: 205 VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 264
VPDSTY+M+GGLD QIKEIKEVIELP+KHPELF++LGIAQPKGVLLYGPPGTGKTLLARA
Sbjct: 135 VPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARA 194
Query: 265 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNT 324
VAHHT+CTFIRVSG+ELVQK+IGEGSRMVRELFVMA
Sbjct: 195 VAHHTDCTFIRVSGTELVQKYIGEGSRMVRELFVMA------------------------ 230
Query: 325 IVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGSSRIE SGGDSEVQRTMLEL+NQLDGFE TK
Sbjct: 231 -----REHAPSIIFMDEIDSIGSSRIEGKSGGDSEVQRTMLELVNQLDGFEPTK 279
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+CTFIRVSG+ELVQK+IGEGSRMVRELFVMAR S MD
Sbjct: 186 TGKTLLARAVAHHTDCTFIRVSGTELVQKYIGEGSRMVRELFVMAREHAPS----IIFMD 241
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 242 EIDSIGSS 249
>gi|212535938|ref|XP_002148125.1| proteasome regulatory particle subunit Rpt6, putative [Talaromyces
marneffei ATCC 18224]
gi|210070524|gb|EEA24614.1| proteasome regulatory particle subunit Rpt6, putative [Talaromyces
marneffei ATCC 18224]
Length = 321
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 204/294 (69%), Positives = 234/294 (79%), Gaps = 29/294 (9%)
Query: 85 YYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDK 144
YY KIE ++L + + + LRRL+AQRN+ N++VR+LREEL LLQ+ GSYVGEVVK M
Sbjct: 6 YYRNKIESMKLEIIQGQAVLRRLEAQRNDYNSRVRLLREELGLLQQPGSYVGEVVKVMGT 65
Query: 145 KKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEK 204
KKVLVKVHPEGK+VVDI N+D++ +T RV+L +++Y L K+LP+ VDPLVSLMMVEK
Sbjct: 66 KKVLVKVHPEGKYVVDIADNVDVSKLTVGKRVSLLSDTYKLEKMLPSSVDPLVSLMMVEK 125
Query: 205 VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 264
VPDSTY+M+GGLD QIKEIKEVIEL +KHPELF++LGIAQPKGVLLYGPPGTGKTLLARA
Sbjct: 126 VPDSTYDMIGGLDQQIKEIKEVIELGLKHPELFESLGIAQPKGVLLYGPPGTGKTLLARA 185
Query: 265 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNT 324
VAHH +C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 186 VAHHADCKFIRVSGSELVQKYIGEGSRMVRELFVMA------------------------ 221
Query: 325 IVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGSSR+E SGGDSEVQRTMLELLNQLDGFE TK
Sbjct: 222 -----REHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFEPTK 270
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 51/98 (52%), Positives = 59/98 (60%), Gaps = 19/98 (19%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA--------------- 56
+GKTLLARAVAHH +C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 177 TGKTLLARAVAHHADCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDS 236
Query: 57 ----RCKGSSRGTEFFTMDVDEAIKSSEGFKPYYVTKI 90
R +GSS G + E + +GF+P KI
Sbjct: 237 IGSSRVEGSSGGDSEVQRTMLELLNQLDGFEPTKNIKI 274
>gi|346972539|gb|EGY15991.1| 26S protease regulatory subunit 8 [Verticillium dahliae VdLs.17]
Length = 389
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 205/294 (69%), Positives = 233/294 (79%), Gaps = 29/294 (9%)
Query: 85 YYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDK 144
YY KIE ++L + + + LRRL+AQRN+ N++VR+LREEL LLQ+ GSYVGEVVK M
Sbjct: 6 YYQNKIEAMKLEILKGQAVLRRLEAQRNDYNSRVRLLREELGLLQQPGSYVGEVVKVMGT 65
Query: 145 KKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEK 204
KKVLVKVHPEGK+VVDI ++D+ +T RV L ++SY L K+LP+ VDPLVSLMMVEK
Sbjct: 66 KKVLVKVHPEGKYVVDIADSVDVTKLTVGKRVTLLSDSYKLEKMLPSSVDPLVSLMMVEK 125
Query: 205 VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 264
VPDSTY+M+GGLD QIKEIKEVIEL +KHPELF++LGIAQPKGVLLYGPPGTGKTLLARA
Sbjct: 126 VPDSTYDMIGGLDQQIKEIKEVIELGLKHPELFESLGIAQPKGVLLYGPPGTGKTLLARA 185
Query: 265 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNT 324
VAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 186 VAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMA------------------------ 221
Query: 325 IVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGSSR+E SGGDSEVQRTMLELLNQLDGFE TK
Sbjct: 222 -----REHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFEPTK 270
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/98 (53%), Positives = 60/98 (61%), Gaps = 19/98 (19%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA--------------- 56
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 177 TGKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDS 236
Query: 57 ----RCKGSSRGTEFFTMDVDEAIKSSEGFKPYYVTKI 90
R +GSS G + E + +GF+P KI
Sbjct: 237 IGSSRVEGSSGGDSEVQRTMLELLNQLDGFEPTKNIKI 274
>gi|452977138|gb|EME76911.1| hypothetical protein MYCFIDRAFT_60582 [Pseudocercospora fijiensis
CIRAD86]
Length = 389
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 205/294 (69%), Positives = 233/294 (79%), Gaps = 29/294 (9%)
Query: 85 YYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDK 144
++ KIE ++L + + + LRRL+AQRNE N++VR+LREEL LLQ+ GSYVGEVVK M
Sbjct: 6 FFHNKIESMKLEIIQGQAVLRRLEAQRNEYNSRVRLLREELGLLQQPGSYVGEVVKVMGT 65
Query: 145 KKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEK 204
KKVLVKVHPEGK+VVDI NIDI+ +T RV L ++SY L +LP+ VDPLVSLMMVEK
Sbjct: 66 KKVLVKVHPEGKYVVDIADNIDISKLTAGKRVTLLSDSYKLSSLLPSSVDPLVSLMMVEK 125
Query: 205 VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 264
VPDSTY+M+GGLD QIK+IKEVIEL +KHPELF++LGIAQPKGVLLYGPPGTGKTLLARA
Sbjct: 126 VPDSTYDMIGGLDEQIKQIKEVIELGLKHPELFESLGIAQPKGVLLYGPPGTGKTLLARA 185
Query: 265 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNT 324
VAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 186 VAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMA------------------------ 221
Query: 325 IVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGSSR+E SGGDSEVQRTMLELLNQLDGFE TK
Sbjct: 222 -----REHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFEPTK 270
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 53/68 (77%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMAR S MD
Sbjct: 177 TGKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPS----IIFMD 232
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 233 EIDSIGSS 240
>gi|302507490|ref|XP_003015706.1| hypothetical protein ARB_06017 [Arthroderma benhamiae CBS 112371]
gi|291179274|gb|EFE35061.1| hypothetical protein ARB_06017 [Arthroderma benhamiae CBS 112371]
Length = 415
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 205/294 (69%), Positives = 233/294 (79%), Gaps = 29/294 (9%)
Query: 85 YYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDK 144
YY KIE ++L + + + LRRL+AQRN+ N++VR+LREEL LLQ+ GSYVGEVVK M
Sbjct: 6 YYRNKIESMKLEIIQGQAVLRRLEAQRNDYNSRVRLLREELGLLQQPGSYVGEVVKVMGT 65
Query: 145 KKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEK 204
KKVLVKVHPEGK+VVDI +DI +T RV+L +++Y L K+LP+ VDPLVSLMMVEK
Sbjct: 66 KKVLVKVHPEGKYVVDIADGVDIAKLTVGKRVSLLSDTYKLEKMLPSSVDPLVSLMMVEK 125
Query: 205 VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 264
VPDSTY+M+GGLD QIKEIKEVIEL +KHPELF++LGIAQPKGVLLYGPPGTGKTLLARA
Sbjct: 126 VPDSTYDMIGGLDQQIKEIKEVIELGLKHPELFESLGIAQPKGVLLYGPPGTGKTLLARA 185
Query: 265 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNT 324
VAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 186 VAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMA------------------------ 221
Query: 325 IVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGSSR+E SGGDSEVQRTMLELLNQLDGFE TK
Sbjct: 222 -----REHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFEPTK 270
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/98 (53%), Positives = 60/98 (61%), Gaps = 19/98 (19%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA--------------- 56
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 177 TGKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDS 236
Query: 57 ----RCKGSSRGTEFFTMDVDEAIKSSEGFKPYYVTKI 90
R +GSS G + E + +GF+P KI
Sbjct: 237 IGSSRVEGSSGGDSEVQRTMLELLNQLDGFEPTKNIKI 274
>gi|407927212|gb|EKG20111.1| ATPase AAA+ type core [Macrophomina phaseolina MS6]
Length = 389
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 203/294 (69%), Positives = 233/294 (79%), Gaps = 29/294 (9%)
Query: 85 YYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDK 144
++ KIE ++L + + + LRRL+AQRN+ N++VR+LREEL LLQ+ GSYVGEVVK M
Sbjct: 6 FFHNKIESMKLEIIQGQAKLRRLEAQRNDYNSRVRLLREELGLLQQPGSYVGEVVKVMGT 65
Query: 145 KKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEK 204
KKVLVKVHPEGK+VVD+ +DI+ +T RV L ++SY L K+LP+ VDPLVSLMMVEK
Sbjct: 66 KKVLVKVHPEGKYVVDVSDQVDISKLTAGKRVTLLSDSYKLEKMLPSSVDPLVSLMMVEK 125
Query: 205 VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 264
VPDSTY+M+GGLD QIKEIKEVIEL +KHPELF++LGIAQPKGVLLYGPPGTGKTLLARA
Sbjct: 126 VPDSTYDMIGGLDQQIKEIKEVIELGLKHPELFESLGIAQPKGVLLYGPPGTGKTLLARA 185
Query: 265 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNT 324
VAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 186 VAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMA------------------------ 221
Query: 325 IVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGSSR+E SGGDSEVQRTMLELLNQLDGFE TK
Sbjct: 222 -----REHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFEPTK 270
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/98 (53%), Positives = 60/98 (61%), Gaps = 19/98 (19%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA--------------- 56
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 177 TGKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDS 236
Query: 57 ----RCKGSSRGTEFFTMDVDEAIKSSEGFKPYYVTKI 90
R +GSS G + E + +GF+P KI
Sbjct: 237 IGSSRVEGSSGGDSEVQRTMLELLNQLDGFEPTKNIKI 274
>gi|327292511|ref|XP_003230954.1| 26S protease regulatory subunit 8 [Trichophyton rubrum CBS 118892]
gi|326466891|gb|EGD92344.1| 26S protease regulatory subunit 8 [Trichophyton rubrum CBS 118892]
Length = 389
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 205/294 (69%), Positives = 233/294 (79%), Gaps = 29/294 (9%)
Query: 85 YYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDK 144
YY KIE ++L + + + LRRL+AQRN+ N++VR+LREEL LLQ+ GSYVGEVVK M
Sbjct: 6 YYRNKIESMKLEIIQGQAVLRRLEAQRNDYNSRVRLLREELGLLQQPGSYVGEVVKVMGT 65
Query: 145 KKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEK 204
KKVLVKVHPEGK+VVDI +DI +T RV+L +++Y L K+LP+ VDPLVSLMMVEK
Sbjct: 66 KKVLVKVHPEGKYVVDIADGVDIAKLTVGKRVSLLSDTYKLEKMLPSSVDPLVSLMMVEK 125
Query: 205 VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 264
VPDSTY+M+GGLD QIKEIKEVIEL +KHPELF++LGIAQPKGVLLYGPPGTGKTLLARA
Sbjct: 126 VPDSTYDMIGGLDQQIKEIKEVIELGLKHPELFESLGIAQPKGVLLYGPPGTGKTLLARA 185
Query: 265 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNT 324
VAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 186 VAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMA------------------------ 221
Query: 325 IVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGSSR+E SGGDSEVQRTMLELLNQLDGFE TK
Sbjct: 222 -----REHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFEPTK 270
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/98 (53%), Positives = 60/98 (61%), Gaps = 19/98 (19%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA--------------- 56
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 177 TGKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDS 236
Query: 57 ----RCKGSSRGTEFFTMDVDEAIKSSEGFKPYYVTKI 90
R +GSS G + E + +GF+P KI
Sbjct: 237 IGSSRVEGSSGGDSEVQRTMLELLNQLDGFEPTKNIKI 274
>gi|302666131|ref|XP_003024668.1| hypothetical protein TRV_01185 [Trichophyton verrucosum HKI 0517]
gi|291188734|gb|EFE44057.1| hypothetical protein TRV_01185 [Trichophyton verrucosum HKI 0517]
Length = 415
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 205/294 (69%), Positives = 233/294 (79%), Gaps = 29/294 (9%)
Query: 85 YYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDK 144
YY KIE ++L + + + LRRL+AQRN+ N++VR+LREEL LLQ+ GSYVGEVVK M
Sbjct: 6 YYRNKIESMKLEIIQGQAVLRRLEAQRNDYNSRVRLLREELGLLQQPGSYVGEVVKVMGT 65
Query: 145 KKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEK 204
KKVLVKVHPEGK+VVDI +DI +T RV+L +++Y L K+LP+ VDPLVSLMMVEK
Sbjct: 66 KKVLVKVHPEGKYVVDIADGVDIAKLTVGKRVSLLSDTYKLEKMLPSSVDPLVSLMMVEK 125
Query: 205 VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 264
VPDSTY+M+GGLD QIKEIKEVIEL +KHPELF++LGIAQPKGVLLYGPPGTGKTLLARA
Sbjct: 126 VPDSTYDMIGGLDQQIKEIKEVIELGLKHPELFESLGIAQPKGVLLYGPPGTGKTLLARA 185
Query: 265 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNT 324
VAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 186 VAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMA------------------------ 221
Query: 325 IVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGSSR+E SGGDSEVQRTMLELLNQLDGFE TK
Sbjct: 222 -----REHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFEPTK 270
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/98 (53%), Positives = 60/98 (61%), Gaps = 19/98 (19%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA--------------- 56
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 177 TGKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDS 236
Query: 57 ----RCKGSSRGTEFFTMDVDEAIKSSEGFKPYYVTKI 90
R +GSS G + E + +GF+P KI
Sbjct: 237 IGSSRVEGSSGGDSEVQRTMLELLNQLDGFEPTKNIKI 274
>gi|345569440|gb|EGX52306.1| hypothetical protein AOL_s00043g95 [Arthrobotrys oligospora ATCC
24927]
Length = 389
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 206/294 (70%), Positives = 231/294 (78%), Gaps = 29/294 (9%)
Query: 85 YYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDK 144
YY KIE ++L + LRRL+A RN+LN+KVR+LREEL LLQ+ GSYVGEVVK M
Sbjct: 6 YYQNKIESVKLEIIHSTAVLRRLEATRNDLNSKVRLLREELTLLQQHGSYVGEVVKVMGT 65
Query: 145 KKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEK 204
K+VLVKVHPEGK+VVDI ++I +T RVAL +E+Y L +ILP+ VDPLVSLMMVEK
Sbjct: 66 KRVLVKVHPEGKYVVDIADGVEIAKLTAGKRVALLHENYRLERILPSSVDPLVSLMMVEK 125
Query: 205 VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 264
VPDSTY+M+GGLD QIKEIKEVIEL +KHPELF++LGIAQPKGVLLYGPPGTGKTLLARA
Sbjct: 126 VPDSTYDMIGGLDQQIKEIKEVIELGLKHPELFESLGIAQPKGVLLYGPPGTGKTLLARA 185
Query: 265 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNT 324
VAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 186 VAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMA------------------------ 221
Query: 325 IVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGSSR+E SGGDSEVQRTMLELLNQLDGFE TK
Sbjct: 222 -----REHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFEPTK 270
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 53/68 (77%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMAR S MD
Sbjct: 177 TGKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPS----IIFMD 232
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 233 EIDSIGSS 240
>gi|320594034|gb|EFX06437.1| 26S protease regulatory subunit 8 [Grosmannia clavigera kw1407]
Length = 389
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 205/294 (69%), Positives = 233/294 (79%), Gaps = 29/294 (9%)
Query: 85 YYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDK 144
YY KIE ++L + + + LRRL+AQRN+ N++VR+LREEL LLQ+ GSYVGEVVK M
Sbjct: 6 YYHNKIEAMKLEILKGQAVLRRLEAQRNDYNSRVRLLREELGLLQQAGSYVGEVVKVMGT 65
Query: 145 KKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEK 204
KKVLVKVHPEGK+VVD+ ++DI +T RV L ++SY L K+LP+ VDPLVSLMMVEK
Sbjct: 66 KKVLVKVHPEGKYVVDVADSVDIAKLTVGKRVTLLSDSYKLEKMLPSSVDPLVSLMMVEK 125
Query: 205 VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 264
VPDSTY+M+GGLD QIKEIKEVIEL +KHPELF++LGIAQPKGVLLYGPPGTGKTLLARA
Sbjct: 126 VPDSTYDMIGGLDQQIKEIKEVIELGLKHPELFESLGIAQPKGVLLYGPPGTGKTLLARA 185
Query: 265 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNT 324
VAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 186 VAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMA------------------------ 221
Query: 325 IVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGSSR+E SGGDSEVQRTMLELLNQLDGFE TK
Sbjct: 222 -----REHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFEPTK 270
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 53/68 (77%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMAR S MD
Sbjct: 177 TGKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPS----IIFMD 232
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 233 EIDSIGSS 240
>gi|440631778|gb|ELR01697.1| 26S protease regulatory subunit 8 [Geomyces destructans 20631-21]
Length = 389
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 205/294 (69%), Positives = 233/294 (79%), Gaps = 29/294 (9%)
Query: 85 YYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDK 144
++ KIE ++L + + + LRRL+AQRN+ N++VR+LREEL LLQ+ GSYVGEVVK M
Sbjct: 6 FFHNKIESMKLEIIQGQAVLRRLEAQRNDYNSRVRLLREELGLLQQPGSYVGEVVKVMGT 65
Query: 145 KKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEK 204
KKVLVKVHPEGK+VVDI N+DI +T RV L ++SY L K+LP+ VDPLVSLMMVEK
Sbjct: 66 KKVLVKVHPEGKYVVDISDNVDIAKLTVGKRVTLLSDSYKLEKMLPSSVDPLVSLMMVEK 125
Query: 205 VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 264
VPDSTY+M+GGLD QIKEIKEVIEL +KHPELF++LGIAQPKGVLLYGPPGTGKTLLARA
Sbjct: 126 VPDSTYDMIGGLDQQIKEIKEVIELGLKHPELFESLGIAQPKGVLLYGPPGTGKTLLARA 185
Query: 265 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNT 324
VAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 186 VAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMA------------------------ 221
Query: 325 IVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGSSR+E SGGDSEVQRTMLELLNQLDGFE TK
Sbjct: 222 -----REHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFEPTK 270
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 53/68 (77%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMAR S MD
Sbjct: 177 TGKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPS----IIFMD 232
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 233 EIDSIGSS 240
>gi|189204256|ref|XP_001938463.1| 26S protease regulatory subunit 8 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|330929511|ref|XP_003302669.1| hypothetical protein PTT_14578 [Pyrenophora teres f. teres 0-1]
gi|187985562|gb|EDU51050.1| 26S protease regulatory subunit 8 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|311321811|gb|EFQ89225.1| hypothetical protein PTT_14578 [Pyrenophora teres f. teres 0-1]
Length = 389
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 202/294 (68%), Positives = 234/294 (79%), Gaps = 29/294 (9%)
Query: 85 YYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDK 144
++ KIE ++L + + + LRRL+AQRN+ N++VR+LREEL LLQ+ GSYVGEVVK M
Sbjct: 6 FFHNKIEAMKLEIIQGQAKLRRLEAQRNDYNSRVRLLREELGLLQQPGSYVGEVVKVMGT 65
Query: 145 KKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEK 204
KKVLVKVHPEGK+VVD+ ++DI+ +TP RV L ++SY L K+LP+ VDPLVSLMMVEK
Sbjct: 66 KKVLVKVHPEGKYVVDVADSVDISKLTPGKRVTLLSDSYKLEKLLPSSVDPLVSLMMVEK 125
Query: 205 VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 264
VPDSTY+M+GGLD QIKEIKEVIEL ++HPELF++LGIAQPKGVLLYGPPGTGKTLLARA
Sbjct: 126 VPDSTYDMIGGLDQQIKEIKEVIELGLQHPELFESLGIAQPKGVLLYGPPGTGKTLLARA 185
Query: 265 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNT 324
VAHH +C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 186 VAHHADCKFIRVSGSELVQKYIGEGSRMVRELFVMA------------------------ 221
Query: 325 IVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGSSR+E SGGDSEVQRTMLELLNQLDGFE TK
Sbjct: 222 -----REHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFEPTK 270
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 51/98 (52%), Positives = 59/98 (60%), Gaps = 19/98 (19%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA--------------- 56
+GKTLLARAVAHH +C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 177 TGKTLLARAVAHHADCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDS 236
Query: 57 ----RCKGSSRGTEFFTMDVDEAIKSSEGFKPYYVTKI 90
R +GSS G + E + +GF+P KI
Sbjct: 237 IGSSRVEGSSGGDSEVQRTMLELLNQLDGFEPTKNIKI 274
>gi|391338748|ref|XP_003743717.1| PREDICTED: 26S protease regulatory subunit 8-like [Metaseiulus
occidentalis]
Length = 424
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/305 (63%), Positives = 235/305 (77%), Gaps = 29/305 (9%)
Query: 74 EAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGS 133
E + ++ K Y +KI+ L + +AE+ + LRRL+AQRNELN V LR +LQ L+E S
Sbjct: 30 ERTRQNDFIKEYLTSKIDNLSIEIAERTKTLRRLEAQRNELNTNVLELRVQLQKLREPPS 89
Query: 134 YVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKV 193
YVGEVVK +++ KV VK+ EGKFVV++ K I+ D+ P+ RVAL ++SY LH+ILP+K+
Sbjct: 90 YVGEVVKVIERNKVYVKIPNEGKFVVEVSKAINPKDLKPSVRVALNSDSYFLHRILPSKI 149
Query: 194 DPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGP 253
DP+VSLM VEK+PDS+++++GGLD QI+EIKEV+ELP+KHPELF+ALGI QPKGVLLYGP
Sbjct: 150 DPVVSLMRVEKIPDSSFDLIGGLDKQIREIKEVVELPIKHPELFEALGIEQPKGVLLYGP 209
Query: 254 PGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLL 313
PGTGKTLLARAVAHHT+CTF+RVSGSELVQKFIGEGSRMVRELFVMA
Sbjct: 210 PGTGKTLLARAVAHHTDCTFMRVSGSELVQKFIGEGSRMVRELFVMA------------- 256
Query: 314 FWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDG 373
RE APSIIFMDEIDSIGS+R +SG+ DSEVQRTMLELLNQLDG
Sbjct: 257 ----------------REKAPSIIFMDEIDSIGSTRNDSGANNDSEVQRTMLELLNQLDG 300
Query: 374 FEATK 378
FEATK
Sbjct: 301 FEATK 305
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/51 (88%), Positives = 48/51 (94%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
+GKTLLARAVAHHT+CTF+RVSGSELVQKFIGEGSRMVRELFVMAR K S
Sbjct: 212 TGKTLLARAVAHHTDCTFMRVSGSELVQKFIGEGSRMVRELFVMAREKAPS 262
>gi|226471660|emb|CAX70911.1| Tat-binding protein 10 [Schistosoma japonicum]
Length = 282
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 190/248 (76%), Positives = 211/248 (85%), Gaps = 5/248 (2%)
Query: 72 VDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQ 131
++ + ++G K YY+ KI+E Q I EK NLRRL+AQRNELNAKVRMLREELQLLQEQ
Sbjct: 34 LEPTLPPTDGIKNYYMNKIDEHQFIYTEKVLNLRRLEAQRNELNAKVRMLREELQLLQEQ 93
Query: 132 GSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPN 191
GS+VGEV+K MDKKKVLVKV PEGK+VVDIDKNI+++ ++PNCRVALR++SY LHKILP+
Sbjct: 94 GSFVGEVIKAMDKKKVLVKVQPEGKYVVDIDKNIEMSQISPNCRVALRSDSYILHKILPS 153
Query: 192 KVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLY 251
KVDPLVSLMMVEKVPDSTYEM+GGLD QIKEIKEVIELPVKHPELFDALGIAQPKGVLLY
Sbjct: 154 KVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLY 213
Query: 252 GPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHP 311
GPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEG+RMVR L H P
Sbjct: 214 GPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGARMVRNY-----LSWRENMHRP 268
Query: 312 LLFWSLLT 319
W LT
Sbjct: 269 SFSWMKLT 276
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/39 (94%), Positives = 39/39 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVR 50
+GKTLLARAVAHHTECTFIRVSGSELVQKFIGEG+RMVR
Sbjct: 218 TGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGARMVR 256
>gi|148702336|gb|EDL34283.1| protease (prosome, macropain) 26S subunit, ATPase 5, isoform CRA_b
[Mus musculus]
Length = 326
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 190/229 (82%), Positives = 198/229 (86%), Gaps = 29/229 (12%)
Query: 150 KVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDST 209
+VHPEGKFVVD+DKNIDINDVTPNCRVALRN+SYTLHKILPNKVDPLVSLMMVEKVPDST
Sbjct: 8 QVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDST 67
Query: 210 YEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 269
YEM+GGLD QIKEIKEVIELPVKHPELF+ALGIAQPKGVLLYGPPGTGKTLLARAVAHHT
Sbjct: 68 YEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 127
Query: 270 ECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNF 329
+CTFIRVSGSELVQKFIGEG+RMVRELFVMA
Sbjct: 128 DCTFIRVSGSELVQKFIGEGARMVRELFVMA----------------------------- 158
Query: 330 REHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGSSR+E GSGGDSEVQRTMLELLNQLDGFEATK
Sbjct: 159 REHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATK 207
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/68 (72%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMAR S MD
Sbjct: 114 TGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPS----IIFMD 169
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 170 EIDSIGSS 177
>gi|255713214|ref|XP_002552889.1| KLTH0D03806p [Lachancea thermotolerans]
gi|238934269|emb|CAR22451.1| KLTH0D03806p [Lachancea thermotolerans CBS 6340]
Length = 405
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 205/299 (68%), Positives = 238/299 (79%), Gaps = 30/299 (10%)
Query: 81 GFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVK 140
G KP++ KI++ +L + K QNLRRL+AQRN LN KVR +++EL+LLQE GSYVGEVVK
Sbjct: 17 GIKPFFDQKIQDTELKIRAKTQNLRRLEAQRNALNDKVRFIKDELRLLQEPGSYVGEVVK 76
Query: 141 PMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLM 200
+ KKVLVK+ PEGK++VDI K+I++ D+ + RV L+++SY LHKIL NKVDPLVSLM
Sbjct: 77 VVSDKKVLVKIQPEGKYIVDIAKDINVKDLKASQRVCLKSDSYALHKILENKVDPLVSLM 136
Query: 201 MVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTL 260
MVEKVPDSTY+MVGGL QIKEIKEVIELPVKHPELF++LGIAQPKGV+LYGPPGTGKTL
Sbjct: 137 MVEKVPDSTYDMVGGLTKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTL 196
Query: 261 LARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTI 320
LARAVAHHT+C FIRVSG+ELVQK+IGEGSRMVRELF+MA
Sbjct: 197 LARAVAHHTDCKFIRVSGAELVQKYIGEGSRMVRELFIMA-------------------- 236
Query: 321 LTNTIVCNFREHAPSIIFMDEIDSIGSSRIE-SGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGSSR+E GGDSEVQRTMLELLNQLDGFE +K
Sbjct: 237 ---------REHAPSIIFMDEIDSIGSSRVEGGSGGGDSEVQRTMLELLNQLDGFETSK 286
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 46/68 (67%), Positives = 53/68 (77%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+C FIRVSG+ELVQK+IGEGSRMVRELF+MAR S MD
Sbjct: 192 TGKTLLARAVAHHTDCKFIRVSGAELVQKYIGEGSRMVRELFIMAREHAPS----IIFMD 247
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 248 EIDSIGSS 255
>gi|440473143|gb|ELQ41963.1| 26S protease regulatory subunit 8 [Magnaporthe oryzae Y34]
gi|440485340|gb|ELQ65308.1| 26S protease regulatory subunit 8 [Magnaporthe oryzae P131]
Length = 389
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 206/294 (70%), Positives = 233/294 (79%), Gaps = 29/294 (9%)
Query: 85 YYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDK 144
YY KIE ++L + + + LRRL+AQRN+ N++VR+LREEL LLQ+ GSYVGEVVK M
Sbjct: 6 YYHNKIEAMKLEILKGQAVLRRLEAQRNDYNSRVRLLREELGLLQQPGSYVGEVVKVMGT 65
Query: 145 KKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEK 204
KKVLVKVHPEGK+VVDI ++DI +T RV L ++SY L K+LP+ VDPLVSLMMVEK
Sbjct: 66 KKVLVKVHPEGKYVVDIADSVDITKLTVGKRVTLLSDSYKLEKMLPSSVDPLVSLMMVEK 125
Query: 205 VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 264
VPDSTY+M+GGLD QIKEIKEVIEL +KHPELF++LGIAQPKGVLLYGPPGTGKTLLARA
Sbjct: 126 VPDSTYDMIGGLDQQIKEIKEVIELGLKHPELFESLGIAQPKGVLLYGPPGTGKTLLARA 185
Query: 265 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNT 324
VAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 186 VAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMA------------------------ 221
Query: 325 IVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGSSR+E SGGDSEVQRTMLELLNQLDGFE TK
Sbjct: 222 -----REHAPSIIFMDEIDSIGSSRVEGTSGGDSEVQRTMLELLNQLDGFEPTK 270
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 53/68 (77%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMAR S MD
Sbjct: 177 TGKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPS----IIFMD 232
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 233 EIDSIGSS 240
>gi|409076106|gb|EKM76480.1| hypothetical protein AGABI1DRAFT_115807 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426194449|gb|EKV44380.1| 26S proteasome regulatory complex ATPase RPT6 [Agaricus bisporus
var. bisporus H97]
Length = 402
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 215/299 (71%), Positives = 237/299 (79%), Gaps = 30/299 (10%)
Query: 81 GFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVK 140
G K YY KIE +L++ +K QNLRRL+AQRN LNA+VR+LREELQLLQE GSYVGEVVK
Sbjct: 14 GIKQYYQAKIESAELLINQKTQNLRRLEAQRNALNARVRLLREELQLLQEPGSYVGEVVK 73
Query: 141 PMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLM 200
M K KVLVKV PEGK++VDID +++++ + RVALR++SYT+HKILPNKVDPLVSLM
Sbjct: 74 VMGKNKVLVKVQPEGKYIVDIDSDVEVSALKATLRVALRSDSYTIHKILPNKVDPLVSLM 133
Query: 201 MVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTL 260
MVEKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELF+ALGIAQPKGVLLYGPPGTGKTL
Sbjct: 134 MVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTL 193
Query: 261 LARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTI 320
LARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 194 LARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMA-------------------- 233
Query: 321 LTNTIVCNFREHAPSIIFMDEID-SIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEID S GGDSEVQRTMLELLNQLDGFE+TK
Sbjct: 234 ---------REHAPSIIFMDEIDSIGSSRGESGSGGGDSEVQRTMLELLNQLDGFESTK 283
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 42/46 (91%), Positives = 45/46 (97%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMAR
Sbjct: 189 TGKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAR 234
>gi|119179612|ref|XP_001241366.1| hypothetical protein CIMG_08529 [Coccidioides immitis RS]
gi|258577791|ref|XP_002543077.1| 26S protease regulatory subunit 8 [Uncinocarpus reesii 1704]
gi|303320933|ref|XP_003070461.1| 26S proteasome subunit P45 family protein [Coccidioides posadasii
C735 delta SOWgp]
gi|237903343|gb|EEP77744.1| 26S protease regulatory subunit 8 [Uncinocarpus reesii 1704]
gi|240110157|gb|EER28316.1| 26S proteasome subunit P45 family protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320036118|gb|EFW18058.1| 26S protease regulatory subunit 8 [Coccidioides posadasii str.
Silveira]
gi|392866715|gb|EAS30111.2| 26S protease regulatory subunit 8 [Coccidioides immitis RS]
Length = 389
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 204/294 (69%), Positives = 233/294 (79%), Gaps = 29/294 (9%)
Query: 85 YYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDK 144
Y+ KIE ++L + + + LRRL+AQRN+ N++VR+LREEL LLQ+ GSYVGEVVK M
Sbjct: 6 YFRNKIESMKLEIIKGQAVLRRLEAQRNDYNSRVRLLREELGLLQQPGSYVGEVVKVMST 65
Query: 145 KKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEK 204
KKVLVKVHPEGK+VVD+ +DI +T RV+L ++SY L K+LP+ VDPLVSLMMVEK
Sbjct: 66 KKVLVKVHPEGKYVVDVADGVDIAKLTVGKRVSLMSDSYKLEKMLPSSVDPLVSLMMVEK 125
Query: 205 VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 264
VPDSTY+M+GGLD QIKEIKEVIEL +KHPELF++LGIAQPKGVLLYGPPGTGKTLLARA
Sbjct: 126 VPDSTYDMIGGLDQQIKEIKEVIELGLKHPELFESLGIAQPKGVLLYGPPGTGKTLLARA 185
Query: 265 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNT 324
VAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 186 VAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMA------------------------ 221
Query: 325 IVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGSSR+E SGGDSEVQRTMLELLNQLDGFE TK
Sbjct: 222 -----REHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFEPTK 270
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 53/68 (77%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMAR S MD
Sbjct: 177 TGKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPS----IIFMD 232
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 233 EIDSIGSS 240
>gi|261188087|ref|XP_002620460.1| 26S protease regulatory subunit 8 [Ajellomyces dermatitidis
SLH14081]
gi|239593335|gb|EEQ75916.1| 26S protease regulatory subunit 8 [Ajellomyces dermatitidis
SLH14081]
gi|239609078|gb|EEQ86065.1| 26S protease regulatory subunit 8 [Ajellomyces dermatitidis ER-3]
gi|327356435|gb|EGE85292.1| 26S protease regulatory subunit 8 [Ajellomyces dermatitidis ATCC
18188]
Length = 389
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 203/294 (69%), Positives = 233/294 (79%), Gaps = 29/294 (9%)
Query: 85 YYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDK 144
Y+ KIE ++L + + + LRRL+AQRN+ N++VR+LREEL LLQ+ GSYVGEVVK M
Sbjct: 6 YFRNKIESMKLEIIQGQAVLRRLEAQRNDYNSRVRLLREELGLLQQPGSYVGEVVKVMGT 65
Query: 145 KKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEK 204
KKVLVKVHPEGK+VVDI N+DI+ +T RV+L ++SY L K+LP+ VDPLVSLMMVEK
Sbjct: 66 KKVLVKVHPEGKYVVDIADNVDISKLTVGKRVSLLSDSYKLEKMLPSSVDPLVSLMMVEK 125
Query: 205 VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 264
VPDSTY+M+GGLD QIKEIKEVIEL + HPELF++LGIAQPKGVLLYGPPGTGKTLLARA
Sbjct: 126 VPDSTYDMIGGLDQQIKEIKEVIELGLNHPELFESLGIAQPKGVLLYGPPGTGKTLLARA 185
Query: 265 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNT 324
VAHH +C FIRVSGSELVQK+IGEGSRMVRELF+MA
Sbjct: 186 VAHHADCKFIRVSGSELVQKYIGEGSRMVRELFIMA------------------------ 221
Query: 325 IVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGSSR+E SGGDSEVQRTMLELLNQLDGFE TK
Sbjct: 222 -----REHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFEPTK 270
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/98 (51%), Positives = 59/98 (60%), Gaps = 19/98 (19%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA--------------- 56
+GKTLLARAVAHH +C FIRVSGSELVQK+IGEGSRMVRELF+MA
Sbjct: 177 TGKTLLARAVAHHADCKFIRVSGSELVQKYIGEGSRMVRELFIMAREHAPSIIFMDEIDS 236
Query: 57 ----RCKGSSRGTEFFTMDVDEAIKSSEGFKPYYVTKI 90
R +GSS G + E + +GF+P KI
Sbjct: 237 IGSSRVEGSSGGDSEVQRTMLELLNQLDGFEPTKNIKI 274
>gi|389633333|ref|XP_003714319.1| 26S protease regulatory subunit 8 [Magnaporthe oryzae 70-15]
gi|351646652|gb|EHA54512.1| 26S protease regulatory subunit 8 [Magnaporthe oryzae 70-15]
Length = 430
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 206/294 (70%), Positives = 233/294 (79%), Gaps = 29/294 (9%)
Query: 85 YYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDK 144
YY KIE ++L + + + LRRL+AQRN+ N++VR+LREEL LLQ+ GSYVGEVVK M
Sbjct: 6 YYHNKIEAMKLEILKGQAVLRRLEAQRNDYNSRVRLLREELGLLQQPGSYVGEVVKVMGT 65
Query: 145 KKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEK 204
KKVLVKVHPEGK+VVDI ++DI +T RV L ++SY L K+LP+ VDPLVSLMMVEK
Sbjct: 66 KKVLVKVHPEGKYVVDIADSVDITKLTVGKRVTLLSDSYKLEKMLPSSVDPLVSLMMVEK 125
Query: 205 VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 264
VPDSTY+M+GGLD QIKEIKEVIEL +KHPELF++LGIAQPKGVLLYGPPGTGKTLLARA
Sbjct: 126 VPDSTYDMIGGLDQQIKEIKEVIELGLKHPELFESLGIAQPKGVLLYGPPGTGKTLLARA 185
Query: 265 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNT 324
VAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 186 VAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMA------------------------ 221
Query: 325 IVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGSSR+E SGGDSEVQRTMLELLNQLDGFE TK
Sbjct: 222 -----REHAPSIIFMDEIDSIGSSRVEGTSGGDSEVQRTMLELLNQLDGFEPTK 270
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 53/68 (77%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMAR S MD
Sbjct: 177 TGKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPS----IIFMD 232
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 233 EIDSIGSS 240
>gi|45201053|ref|NP_986623.1| AGL043Cp [Ashbya gossypii ATCC 10895]
gi|44985836|gb|AAS54447.1| AGL043Cp [Ashbya gossypii ATCC 10895]
gi|374109874|gb|AEY98779.1| FAGL043Cp [Ashbya gossypii FDAG1]
Length = 405
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 206/299 (68%), Positives = 237/299 (79%), Gaps = 30/299 (10%)
Query: 81 GFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVK 140
G KPY+ KI+E +L + K NLRRL+AQRN LN KVR +++EL+LLQE GSYVGEVVK
Sbjct: 17 GVKPYFEQKIQETELRIRTKTANLRRLEAQRNALNDKVRFIKDELRLLQEPGSYVGEVVK 76
Query: 141 PMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLM 200
+ KKVLVK+ PEGK++VDI K+I++ D+ + RV L+++SY LHK+L NKVDPLVSLM
Sbjct: 77 VVSDKKVLVKIQPEGKYIVDIAKDINVKDLKVSQRVCLKSDSYVLHKVLENKVDPLVSLM 136
Query: 201 MVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTL 260
MVEKVPDSTY+MVGGL QIKEIKEVIELPVKHPELF++LGIAQPKGV+LYGPPGTGKTL
Sbjct: 137 MVEKVPDSTYDMVGGLTKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTL 196
Query: 261 LARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTI 320
LARAVAHHT+C FIRVSG+ELVQK+IGEGSRMVRELFVMA
Sbjct: 197 LARAVAHHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMA-------------------- 236
Query: 321 LTNTIVCNFREHAPSIIFMDEIDSIGSSRIE-SGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGSSR+E GGDSEVQRTMLELLNQLDGFE +K
Sbjct: 237 ---------REHAPSIIFMDEIDSIGSSRVEGGSGGGDSEVQRTMLELLNQLDGFETSK 286
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 53/68 (77%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+C FIRVSG+ELVQK+IGEGSRMVRELFVMAR S MD
Sbjct: 192 TGKTLLARAVAHHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMAREHAPS----IIFMD 247
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 248 EIDSIGSS 255
>gi|225555079|gb|EEH03372.1| 26S protease regulatory subunit [Ajellomyces capsulatus G186AR]
gi|240281287|gb|EER44790.1| 26S protease regulatory subunit 8 [Ajellomyces capsulatus H143]
gi|325092219|gb|EGC45529.1| 26S protease regulatory subunit 8 [Ajellomyces capsulatus H88]
Length = 389
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 202/294 (68%), Positives = 233/294 (79%), Gaps = 29/294 (9%)
Query: 85 YYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDK 144
Y+ KIE ++L + + + LRRL+AQRN+ N++VR+LREEL LLQ+ GSYVGEVVK M
Sbjct: 6 YFRNKIESMKLEIIQGQAVLRRLEAQRNDYNSRVRLLREELGLLQQPGSYVGEVVKVMGT 65
Query: 145 KKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEK 204
KKVLVKVHPEGK+VVD+ N+DI+ +T RV+L ++SY L K+LP+ VDPLVSLMMVEK
Sbjct: 66 KKVLVKVHPEGKYVVDVADNVDISKLTVGKRVSLLSDSYKLEKMLPSSVDPLVSLMMVEK 125
Query: 205 VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 264
VPDSTY+M+GGLD QIKEIKEVIEL + HPELF++LGIAQPKGVLLYGPPGTGKTLLARA
Sbjct: 126 VPDSTYDMIGGLDQQIKEIKEVIELGLNHPELFESLGIAQPKGVLLYGPPGTGKTLLARA 185
Query: 265 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNT 324
VAHH +C FIRVSGSELVQK+IGEGSRMVRELF+MA
Sbjct: 186 VAHHADCKFIRVSGSELVQKYIGEGSRMVRELFIMA------------------------ 221
Query: 325 IVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGSSR+E SGGDSEVQRTMLELLNQLDGFE TK
Sbjct: 222 -----REHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFEPTK 270
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/98 (51%), Positives = 59/98 (60%), Gaps = 19/98 (19%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA--------------- 56
+GKTLLARAVAHH +C FIRVSGSELVQK+IGEGSRMVRELF+MA
Sbjct: 177 TGKTLLARAVAHHADCKFIRVSGSELVQKYIGEGSRMVRELFIMAREHAPSIIFMDEIDS 236
Query: 57 ----RCKGSSRGTEFFTMDVDEAIKSSEGFKPYYVTKI 90
R +GSS G + E + +GF+P KI
Sbjct: 237 IGSSRVEGSSGGDSEVQRTMLELLNQLDGFEPTKNIKI 274
>gi|154273042|ref|XP_001537373.1| 26S protease regulatory subunit 8 [Ajellomyces capsulatus NAm1]
gi|150415885|gb|EDN11229.1| 26S protease regulatory subunit 8 [Ajellomyces capsulatus NAm1]
Length = 389
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 202/294 (68%), Positives = 233/294 (79%), Gaps = 29/294 (9%)
Query: 85 YYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDK 144
Y+ KIE ++L + + + LRRL+AQRN+ N++VR+LREEL LLQ+ GSYVGEVVK M
Sbjct: 6 YFRNKIESMKLEIIQGQAVLRRLEAQRNDYNSRVRLLREELGLLQQPGSYVGEVVKVMGT 65
Query: 145 KKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEK 204
KKVLVKVHPEGK+VVD+ N+DI+ +T RV+L ++SY L K+LP+ VDPLVSLMMVEK
Sbjct: 66 KKVLVKVHPEGKYVVDVADNVDISKLTVGKRVSLLSDSYKLEKMLPSSVDPLVSLMMVEK 125
Query: 205 VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 264
VPDSTY+M+GGLD QIKEIKEVIEL + HPELF++LGIAQPKGVLLYGPPGTGKTLLARA
Sbjct: 126 VPDSTYDMIGGLDQQIKEIKEVIELGLNHPELFESLGIAQPKGVLLYGPPGTGKTLLARA 185
Query: 265 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNT 324
VAHH +C FIRVSGSELVQK+IGEGSRMVRELF+MA
Sbjct: 186 VAHHADCKFIRVSGSELVQKYIGEGSRMVRELFIMA------------------------ 221
Query: 325 IVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGSSR+E SGGDSEVQRTMLELLNQLDGFE TK
Sbjct: 222 -----REHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFEPTK 270
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/98 (51%), Positives = 59/98 (60%), Gaps = 19/98 (19%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA--------------- 56
+GKTLLARAVAHH +C FIRVSGSELVQK+IGEGSRMVRELF+MA
Sbjct: 177 TGKTLLARAVAHHADCKFIRVSGSELVQKYIGEGSRMVRELFIMAREHAPSIIFMDEIDS 236
Query: 57 ----RCKGSSRGTEFFTMDVDEAIKSSEGFKPYYVTKI 90
R +GSS G + E + +GF+P KI
Sbjct: 237 IGSSRVEGSSGGDSEVQRTMLELLNQLDGFEPTKNIKI 274
>gi|425777740|gb|EKV15896.1| Proteasome regulatory particle subunit Rpt6, putative [Penicillium
digitatum PHI26]
gi|425782669|gb|EKV20566.1| Proteasome regulatory particle subunit Rpt6, putative [Penicillium
digitatum Pd1]
Length = 389
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 204/294 (69%), Positives = 232/294 (78%), Gaps = 29/294 (9%)
Query: 85 YYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDK 144
YY KIE ++L + + + LRRL+AQRN+ N++VR+LREEL LLQ+ GSYVGEVVK M
Sbjct: 6 YYRNKIEGMKLEIIQGQAVLRRLEAQRNDYNSRVRLLREELGLLQQPGSYVGEVVKVMST 65
Query: 145 KKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEK 204
KKVLVKVHPEGK+VVDI +DI+ + RVAL ++SY L K+LP+ VDPLV+LMMVEK
Sbjct: 66 KKVLVKVHPEGKYVVDISDGVDISKLVVGKRVALLSDSYKLEKMLPSSVDPLVALMMVEK 125
Query: 205 VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 264
VPDSTY+M+GGLD QIKEIKEVIEL +KHPELF++LGIAQPKGVLLYGPPGTGKTLLARA
Sbjct: 126 VPDSTYDMIGGLDQQIKEIKEVIELGLKHPELFESLGIAQPKGVLLYGPPGTGKTLLARA 185
Query: 265 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNT 324
AHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 186 AAHHTDCRFIRVSGSELVQKYIGEGSRMVRELFVMA------------------------ 221
Query: 325 IVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGSSRI+S GGDSEVQRTMLELLNQLDGFE TK
Sbjct: 222 -----REHAPSIIFMDEIDSIGSSRIDSSGGGDSEVQRTMLELLNQLDGFEPTK 270
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 52/68 (76%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARA AHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMAR S MD
Sbjct: 177 TGKTLLARAAAHHTDCRFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPS----IIFMD 232
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 233 EIDSIGSS 240
>gi|412990311|emb|CCO19629.1| 26S protease regulatory subunit 8 [Bathycoccus prasinos]
Length = 406
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/298 (65%), Positives = 233/298 (78%), Gaps = 30/298 (10%)
Query: 81 GFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVK 140
G KP++ K+E L++ V + QNLRRL+AQRNELN++VR L+EEL LLQE GSY+GEVVK
Sbjct: 18 GLKPFFKGKVEALEIAVRDGTQNLRRLEAQRNELNSRVRALKEELSLLQEPGSYIGEVVK 77
Query: 141 PMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLM 200
M K KVLVK HP+GK+VVD D++ID+ +TP RVAL+N+SY LH ILP+ +DPLVSLM
Sbjct: 78 VMGKTKVLVKAHPDGKYVVDFDRSIDLAKLTPGVRVALKNDSYALHYILPSMIDPLVSLM 137
Query: 201 MVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTL 260
VEKVPDST++M+GGLD Q+KEIKEV+ELP+KHPELFD+LGIAQPKGV+LYGPPGTGKTL
Sbjct: 138 KVEKVPDSTFDMIGGLDQQVKEIKEVVELPIKHPELFDSLGIAQPKGVILYGPPGTGKTL 197
Query: 261 LARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTI 320
LARAVAHHT+C FIRVSGSELVQK+IGEG+RMVRELFVMA
Sbjct: 198 LARAVAHHTDCCFIRVSGSELVQKYIGEGARMVRELFVMA-------------------- 237
Query: 321 LTNTIVCNFREHAPSIIFMDEID-SIGSSRIESGSGGDSEVQRTMLELLNQLDGFEAT 377
RE+ P+I+FMDE+D + GSGGDSEVQRTMLELLNQLDGFEA+
Sbjct: 238 ---------RENEPAILFMDEVDSIGSARGGGGGSGGDSEVQRTMLELLNQLDGFEAS 286
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 41/46 (89%), Positives = 45/46 (97%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEG+RMVRELFVMAR
Sbjct: 193 TGKTLLARAVAHHTDCCFIRVSGSELVQKYIGEGARMVRELFVMAR 238
>gi|295671849|ref|XP_002796471.1| 26S protease regulatory subunit 8 [Paracoccidioides sp. 'lutzii'
Pb01]
gi|225681373|gb|EEH19657.1| 26S protease regulatory subunit 8 [Paracoccidioides brasiliensis
Pb03]
gi|226283451|gb|EEH39017.1| 26S protease regulatory subunit 8 [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 389
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 202/294 (68%), Positives = 233/294 (79%), Gaps = 29/294 (9%)
Query: 85 YYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDK 144
Y+ KIE ++L + + + LRRL+AQRN+ N++VR+LREEL LLQ+ GSYVGEVVK M
Sbjct: 6 YFRNKIESMKLEIIQGQAVLRRLEAQRNDYNSRVRLLREELGLLQQPGSYVGEVVKVMGT 65
Query: 145 KKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEK 204
KKVLVKVHPEGK+VVD+ N+DI+ +T RV+L ++SY L K+LP+ VDPLVSLMMVEK
Sbjct: 66 KKVLVKVHPEGKYVVDVADNVDISKLTVGKRVSLLSDSYKLEKMLPSSVDPLVSLMMVEK 125
Query: 205 VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 264
VPDSTY+M+GGLD QIKEIKEVIEL + HPELF++LGIAQPKGVLLYGPPGTGKTLLARA
Sbjct: 126 VPDSTYDMIGGLDQQIKEIKEVIELGLNHPELFESLGIAQPKGVLLYGPPGTGKTLLARA 185
Query: 265 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNT 324
VAHH +C FIRVSGSELVQK+IGEGSRMVRELF+MA
Sbjct: 186 VAHHADCKFIRVSGSELVQKYIGEGSRMVRELFIMA------------------------ 221
Query: 325 IVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGSSR+E SGGDSEVQRTMLELLNQLDGFE TK
Sbjct: 222 -----REHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFEPTK 270
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/68 (67%), Positives = 52/68 (76%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHH +C FIRVSGSELVQK+IGEGSRMVRELF+MAR S MD
Sbjct: 177 TGKTLLARAVAHHADCKFIRVSGSELVQKYIGEGSRMVRELFIMAREHAPS----IIFMD 232
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 233 EIDSIGSS 240
>gi|452839275|gb|EME41214.1| hypothetical protein DOTSEDRAFT_73588 [Dothistroma septosporum
NZE10]
Length = 389
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 203/294 (69%), Positives = 233/294 (79%), Gaps = 29/294 (9%)
Query: 85 YYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDK 144
++ KIE ++L + + + LRRL+AQRNE N++VR+LREEL LLQ+ GSYVGEVVK M
Sbjct: 6 FFHNKIESMKLEIIQGQAVLRRLEAQRNEYNSRVRLLREELGLLQQPGSYVGEVVKVMST 65
Query: 145 KKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEK 204
KKVLVKVHPEGK+VVD+ +IDI+ +T RV L ++SY L +LP+ VDPLVSLMMVEK
Sbjct: 66 KKVLVKVHPEGKYVVDVADSIDISKLTAGKRVTLLSDSYKLSSLLPSSVDPLVSLMMVEK 125
Query: 205 VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 264
VPDSTY+M+GGLD QIK+IKEVIEL +KHPELF++LGIAQPKGVLLYGPPGTGKTLLARA
Sbjct: 126 VPDSTYDMIGGLDEQIKQIKEVIELGLKHPELFESLGIAQPKGVLLYGPPGTGKTLLARA 185
Query: 265 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNT 324
VAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 186 VAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMA------------------------ 221
Query: 325 IVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGSSR+E SGGDSEVQRTMLELLNQLDGFE TK
Sbjct: 222 -----REHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFEPTK 270
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 53/68 (77%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMAR S MD
Sbjct: 177 TGKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPS----IIFMD 232
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 233 EIDSIGSS 240
>gi|378733524|gb|EHY59983.1| 26S protease regulatory subunit 8 [Exophiala dermatitidis
NIH/UT8656]
Length = 389
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 204/294 (69%), Positives = 233/294 (79%), Gaps = 29/294 (9%)
Query: 85 YYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDK 144
+Y KIE L+L + + + LRRL+AQRN+ N++VR+LREEL LLQ+ GSYVGEVVK M
Sbjct: 6 FYRNKIESLKLEIIQGQAVLRRLEAQRNDYNSRVRLLREELGLLQQPGSYVGEVVKVMST 65
Query: 145 KKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEK 204
KKVLVKVHPEGK+VVDI ++DI+ +T RV+L ++SY L K+LP+ VDPLVSLMMVEK
Sbjct: 66 KKVLVKVHPEGKYVVDIADSVDISKLTVGKRVSLLSDSYKLEKMLPSSVDPLVSLMMVEK 125
Query: 205 VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 264
VPDSTY+M+GGLD QIKEIKEVIEL + HPELF++LGIAQPKGVLLYGPPGTGKTLLARA
Sbjct: 126 VPDSTYDMIGGLDQQIKEIKEVIELGLNHPELFESLGIAQPKGVLLYGPPGTGKTLLARA 185
Query: 265 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNT 324
VAHH +C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 186 VAHHADCKFIRVSGSELVQKYIGEGSRMVRELFVMA------------------------ 221
Query: 325 IVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGSSR+E SGGDSEVQRTMLELLNQLDGFE TK
Sbjct: 222 -----REHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFEPTK 270
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 52/68 (76%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHH +C FIRVSGSELVQK+IGEGSRMVRELFVMAR S MD
Sbjct: 177 TGKTLLARAVAHHADCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPS----IIFMD 232
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 233 EIDSIGSS 240
>gi|398404908|ref|XP_003853920.1| proteasome regulatory particle subunit RPT6 [Zymoseptoria tritici
IPO323]
gi|339473803|gb|EGP88896.1| 26S proteasome regulatory complex, ATPase RPT6 [Zymoseptoria
tritici IPO323]
Length = 389
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 203/294 (69%), Positives = 233/294 (79%), Gaps = 29/294 (9%)
Query: 85 YYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDK 144
++ KIE ++L + + + LRRL+AQRNE N++VR+LREEL LLQ+ GSYVGEVVK M
Sbjct: 6 FFNNKIESMKLEIIQGQAVLRRLEAQRNEYNSRVRLLREELGLLQQPGSYVGEVVKVMGT 65
Query: 145 KKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEK 204
KKVLVKVHPEGK+VVD+ +IDI+ +T RV L ++SY L +LP+ VDPLVSLMMVEK
Sbjct: 66 KKVLVKVHPEGKYVVDVADSIDISKLTAGKRVTLLSDSYKLSSLLPSSVDPLVSLMMVEK 125
Query: 205 VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 264
VPDSTY+M+GGLD QIK+IKEVIEL +KHPELF++LGIAQPKGVLLYGPPGTGKTLLARA
Sbjct: 126 VPDSTYDMIGGLDEQIKQIKEVIELGLKHPELFESLGIAQPKGVLLYGPPGTGKTLLARA 185
Query: 265 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNT 324
VAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 186 VAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMA------------------------ 221
Query: 325 IVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGSSR+E SGGDSEVQRTMLELLNQLDGFE TK
Sbjct: 222 -----REHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFEPTK 270
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 53/68 (77%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMAR S MD
Sbjct: 177 TGKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPS----IIFMD 232
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 233 EIDSIGSS 240
>gi|403222534|dbj|BAM40666.1| 26S proteasome ATPase subunit [Theileria orientalis strain
Shintoku]
Length = 390
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 197/291 (67%), Positives = 229/291 (78%), Gaps = 30/291 (10%)
Query: 85 YYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDK 144
YY + IE+ + I+ ++ RL+AQRNELN +VR L++EL L E GS+VGEV+K M+
Sbjct: 9 YYNSLIEDYESILNQRLITKSRLEAQRNELNLRVRELKDELHSLLESGSFVGEVIKAMNN 68
Query: 145 KKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEK 204
+KVLVK+ EGK+VV++ +IDI+ VTPN RVAL ++SY LHKILP KVDPLV+LM VEK
Sbjct: 69 EKVLVKISLEGKYVVEVANDIDISLVTPNTRVALMSDSYKLHKILPTKVDPLVALMKVEK 128
Query: 205 VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 264
VPDSTYEMVGGL +QIK++KEVIELP+KHPE+FDALGI+QPKGVLLYGPPGTGKTLLARA
Sbjct: 129 VPDSTYEMVGGLQDQIKQVKEVIELPIKHPEIFDALGISQPKGVLLYGPPGTGKTLLARA 188
Query: 265 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNT 324
VAHHTECTFIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 189 VAHHTECTFIRVSGSELVQKYIGEGSRMVRELFVMA------------------------ 224
Query: 325 IVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
R HAPSIIFMDEIDSIGS+R E GS GDSEVQRTMLELL+QLDGFE
Sbjct: 225 -----RNHAPSIIFMDEIDSIGSTRSE-GSRGDSEVQRTMLELLSQLDGFE 269
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/97 (53%), Positives = 60/97 (61%), Gaps = 18/97 (18%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKG----------- 60
+GKTLLARAVAHHTECTFIRVSGSELVQK+IGEGSRMVRELFVMAR
Sbjct: 180 TGKTLLARAVAHHTECTFIRVSGSELVQKYIGEGSRMVRELFVMARNHAPSIIFMDEIDS 239
Query: 61 -------SSRGTEFFTMDVDEAIKSSEGFKPYYVTKI 90
SRG + E + +GF+P+ K+
Sbjct: 240 IGSTRSEGSRGDSEVQRTMLELLSQLDGFEPFQNIKV 276
>gi|255935967|ref|XP_002559010.1| Pc13g05760 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211583630|emb|CAP91645.1| Pc13g05760 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 389
Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust.
Identities = 204/294 (69%), Positives = 231/294 (78%), Gaps = 29/294 (9%)
Query: 85 YYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDK 144
YY KIE ++L + + + LRRL+AQRN+ N++VR+LREEL LLQ+ GSYVGEVVK M
Sbjct: 6 YYRNKIEGMKLEIIQGQAVLRRLEAQRNDYNSRVRLLREELGLLQQPGSYVGEVVKVMST 65
Query: 145 KKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEK 204
KKVLVKVHPEGK+VVDI +DI + RVAL ++SY L K+LP+ VDPLV+LMMVEK
Sbjct: 66 KKVLVKVHPEGKYVVDISDGVDIGKLVVGKRVALLSDSYKLEKMLPSSVDPLVALMMVEK 125
Query: 205 VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 264
VPDSTY+M+GGLD QIKEIKEVIEL +KHPELF++LGIAQPKGVLLYGPPGTGKTLLARA
Sbjct: 126 VPDSTYDMIGGLDQQIKEIKEVIELGLKHPELFESLGIAQPKGVLLYGPPGTGKTLLARA 185
Query: 265 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNT 324
AHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 186 AAHHTDCRFIRVSGSELVQKYIGEGSRMVRELFVMA------------------------ 221
Query: 325 IVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGSSRI+S GGDSEVQRTMLELLNQLDGFE TK
Sbjct: 222 -----REHAPSIIFMDEIDSIGSSRIDSSGGGDSEVQRTMLELLNQLDGFEPTK 270
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 52/68 (76%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARA AHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMAR S MD
Sbjct: 177 TGKTLLARAAAHHTDCRFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPS----IIFMD 232
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 233 EIDSIGSS 240
>gi|402219220|gb|EJT99294.1| 26S proteasome regulatory complex ATPase RPT6 [Dacryopinax sp.
DJM-731 SS1]
Length = 402
Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust.
Identities = 217/302 (71%), Positives = 236/302 (78%), Gaps = 30/302 (9%)
Query: 78 SSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGE 137
SS G K YY KIE ++ + K QNLRRL+AQRN LNA+VR+LREELQLLQE GSYVGE
Sbjct: 11 SSPGIKAYYQAKIEAAEITINSKTQNLRRLEAQRNALNARVRLLREELQLLQEPGSYVGE 70
Query: 138 VVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLV 197
VVK M K KVLVKV PEGK+VVD+D I ++ +TP+ RV+LR++SY +HKILPNKVDPLV
Sbjct: 71 VVKVMGKNKVLVKVQPEGKYVVDVDPEIVLSTLTPSLRVSLRSDSYQIHKILPNKVDPLV 130
Query: 198 SLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTG 257
SLMMVEKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELF+ALGIAQPKGVLLYGPPGTG
Sbjct: 131 SLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTG 190
Query: 258 KTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSL 317
KTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 191 KTLLARAVAHHTDCRFIRVSGSELVQKYIGEGSRMVRELFVMA----------------- 233
Query: 318 LTILTNTIVCNFREHAPSIIFMDEID-SIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
REHAPSIIFMDEID S GGDSEVQRTMLELLNQLDGFE
Sbjct: 234 ------------REHAPSIIFMDEIDSIGSSRGESGSGGGDSEVQRTMLELLNQLDGFEP 281
Query: 377 TK 378
TK
Sbjct: 282 TK 283
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 42/46 (91%), Positives = 45/46 (97%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMAR
Sbjct: 189 TGKTLLARAVAHHTDCRFIRVSGSELVQKYIGEGSRMVRELFVMAR 234
>gi|388578866|gb|EIM19199.1| 26S proteasome subunit P45 [Wallemia sebi CBS 633.66]
Length = 401
Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust.
Identities = 215/304 (70%), Positives = 239/304 (78%), Gaps = 30/304 (9%)
Query: 76 IKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYV 135
+K + G + YY +KIEE +L + + QNLRRL+AQRN LN KVR+LREELQLLQE GSYV
Sbjct: 8 VKPAGGIQNYYTSKIEEAELAIHARTQNLRRLEAQRNALNTKVRLLREELQLLQEPGSYV 67
Query: 136 GEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDP 195
GEVVK M K KVLVKV PEGKF+VD ++I I+D+ P+ RVALR++SYTLHKILPNKVDP
Sbjct: 68 GEVVKVMGKTKVLVKVQPEGKFIVDFAQDIKIDDLKPSLRVALRSDSYTLHKILPNKVDP 127
Query: 196 LVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPG 255
LVSLMMVEKVPDSTYE VGGLD QIKEIKEVIELPVKHPELF++LGIAQPKGVLLYGPPG
Sbjct: 128 LVSLMMVEKVPDSTYENVGGLDKQIKEIKEVIELPVKHPELFESLGIAQPKGVLLYGPPG 187
Query: 256 TGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFW 315
TGKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 188 TGKTLLARAVAHHTDCAFIRVSGSELVQKYIGEGSRMVRELFVMA--------------- 232
Query: 316 SLLTILTNTIVCNFREHAPSIIFMDEID-SIGSSRIESGSGGDSEVQRTMLELLNQLDGF 374
R+HAPSIIFMDEID S GGDSEVQRTMLELLNQLDGF
Sbjct: 233 --------------RDHAPSIIFMDEIDSIGSSRGESGSGGGDSEVQRTMLELLNQLDGF 278
Query: 375 EATK 378
E++K
Sbjct: 279 ESSK 282
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/46 (91%), Positives = 45/46 (97%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMAR
Sbjct: 188 TGKTLLARAVAHHTDCAFIRVSGSELVQKYIGEGSRMVRELFVMAR 233
>gi|315040553|ref|XP_003169654.1| 26S protease regulatory subunit 8 [Arthroderma gypseum CBS 118893]
gi|311346344|gb|EFR05547.1| 26S protease regulatory subunit 8 [Arthroderma gypseum CBS 118893]
Length = 350
Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust.
Identities = 203/295 (68%), Positives = 231/295 (78%), Gaps = 29/295 (9%)
Query: 82 FKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKP 141
YY KIE ++L + + + LRRL+AQRN+ N++VR+LREEL LLQ+ GSYVGEVVK
Sbjct: 3 LDSYYRNKIESMKLEIIQGQAVLRRLEAQRNDYNSRVRLLREELGLLQQPGSYVGEVVKV 62
Query: 142 MDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMM 201
M KKVLVKVHPEGK+VVDI +DI +T RV+L +++Y L K+LP+ VDPLVSLMM
Sbjct: 63 MGTKKVLVKVHPEGKYVVDIADGVDIAKLTVGKRVSLLSDTYKLEKMLPSSVDPLVSLMM 122
Query: 202 VEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLL 261
VEKVPDSTY+M+GGLD QIKEIKEVIEL +KHPELF++LGIAQPKGVLLYGPPGTGKTLL
Sbjct: 123 VEKVPDSTYDMIGGLDQQIKEIKEVIELGLKHPELFESLGIAQPKGVLLYGPPGTGKTLL 182
Query: 262 ARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTIL 321
ARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 183 ARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMA--------------------- 221
Query: 322 TNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
REHAPSIIFMDEIDSIGSSR+E SGGDSEVQRTMLELLNQLDG EA
Sbjct: 222 --------REHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGVEA 268
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 53/68 (77%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMAR S MD
Sbjct: 177 TGKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPS----IIFMD 232
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 233 EIDSIGSS 240
>gi|226288499|gb|EEH44011.1| 26S protease regulatory subunit 8 [Paracoccidioides brasiliensis
Pb18]
Length = 520
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 202/294 (68%), Positives = 233/294 (79%), Gaps = 29/294 (9%)
Query: 85 YYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDK 144
Y+ KIE ++L + + + LRRL+AQRN+ N++VR+LREEL LLQ+ GSYVGEVVK M
Sbjct: 137 YFRNKIESMKLEIIQGQAVLRRLEAQRNDYNSRVRLLREELGLLQQPGSYVGEVVKVMGT 196
Query: 145 KKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEK 204
KKVLVKVHPEGK+VVD+ N+DI+ +T RV+L ++SY L K+LP+ VDPLVSLMMVEK
Sbjct: 197 KKVLVKVHPEGKYVVDVADNVDISKLTVGKRVSLLSDSYKLEKMLPSSVDPLVSLMMVEK 256
Query: 205 VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 264
VPDSTY+M+GGLD QIKEIKEVIEL + HPELF++LGIAQPKGVLLYGPPGTGKTLLARA
Sbjct: 257 VPDSTYDMIGGLDQQIKEIKEVIELGLNHPELFESLGIAQPKGVLLYGPPGTGKTLLARA 316
Query: 265 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNT 324
VAHH +C FIRVSGSELVQK+IGEGSRMVRELF+MA
Sbjct: 317 VAHHADCKFIRVSGSELVQKYIGEGSRMVRELFIMA------------------------ 352
Query: 325 IVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGSSR+E SGGDSEVQRTMLELLNQLDGFE TK
Sbjct: 353 -----REHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFEPTK 401
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/68 (67%), Positives = 52/68 (76%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHH +C FIRVSGSELVQK+IGEGSRMVRELF+MAR S MD
Sbjct: 308 TGKTLLARAVAHHADCKFIRVSGSELVQKYIGEGSRMVRELFIMAREHAPS----IIFMD 363
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 364 EIDSIGSS 371
>gi|154292987|ref|XP_001547053.1| 26S protease regulatory subunit 8 [Botryotinia fuckeliana B05.10]
Length = 389
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 203/294 (69%), Positives = 234/294 (79%), Gaps = 29/294 (9%)
Query: 85 YYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDK 144
++ KIE ++L + + + LRRL+AQRN+ N++VR+LREEL LLQ+ GSYVGEVVK M
Sbjct: 6 FFHNKIESMKLEIIQGQAVLRRLEAQRNDYNSRVRLLREELGLLQQPGSYVGEVVKVMGT 65
Query: 145 KKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEK 204
KKVLVKVHPEGK+VVDI ++DI+ +T RV L ++SY L K+LP+ VDPLVSLMMVEK
Sbjct: 66 KKVLVKVHPEGKYVVDIADSVDISKLTVGKRVTLLSDSYKLEKMLPSSVDPLVSLMMVEK 125
Query: 205 VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 264
VPDSTY+M+GGLD Q+KEIKEVIEL +KHPELF++LGIAQPKGVLLYGPPGTGKTLLARA
Sbjct: 126 VPDSTYDMIGGLDQQVKEIKEVIELGLKHPELFESLGIAQPKGVLLYGPPGTGKTLLARA 185
Query: 265 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNT 324
VAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 186 VAHHTDCRFIRVSGSELVQKYIGEGSRMVRELFVMA------------------------ 221
Query: 325 IVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGSSR+E SGGDSEVQRTMLELLNQLDGFE TK
Sbjct: 222 -----REHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFEPTK 270
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 53/68 (77%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMAR S MD
Sbjct: 177 TGKTLLARAVAHHTDCRFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPS----IIFMD 232
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 233 EIDSIGSS 240
>gi|451847489|gb|EMD60796.1| hypothetical protein COCSADRAFT_39515 [Cochliobolus sativus ND90Pr]
gi|451996556|gb|EMD89022.1| hypothetical protein COCHEDRAFT_1140735 [Cochliobolus
heterostrophus C5]
Length = 389
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 201/294 (68%), Positives = 232/294 (78%), Gaps = 29/294 (9%)
Query: 85 YYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDK 144
++ KIE ++L + + + LRRL+AQRN+ N++VR+LREEL LLQ+ GSYVGEVVK M
Sbjct: 6 FFHNKIEAMKLEIIQGQAKLRRLEAQRNDYNSRVRLLREELGLLQQPGSYVGEVVKVMGT 65
Query: 145 KKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEK 204
KKVLVKVHPEGK+VVD+ ++DI +T RV L ++SY L K+LP+ VDPLVSLMMVEK
Sbjct: 66 KKVLVKVHPEGKYVVDVADSVDITKLTAGKRVTLLSDSYKLEKLLPSSVDPLVSLMMVEK 125
Query: 205 VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 264
VPDSTY+M+GGLD QIKEIKEVIEL ++HPELF++LGIAQPKGVLLYGPPGTGKTLLARA
Sbjct: 126 VPDSTYDMIGGLDQQIKEIKEVIELGLQHPELFESLGIAQPKGVLLYGPPGTGKTLLARA 185
Query: 265 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNT 324
VAHH +C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 186 VAHHADCKFIRVSGSELVQKYIGEGSRMVRELFVMA------------------------ 221
Query: 325 IVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGSSR+E SGGDSEVQRTMLELLNQLDGFE TK
Sbjct: 222 -----REHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFEPTK 270
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 51/98 (52%), Positives = 59/98 (60%), Gaps = 19/98 (19%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA--------------- 56
+GKTLLARAVAHH +C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 177 TGKTLLARAVAHHADCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDS 236
Query: 57 ----RCKGSSRGTEFFTMDVDEAIKSSEGFKPYYVTKI 90
R +GSS G + E + +GF+P KI
Sbjct: 237 IGSSRVEGSSGGDSEVQRTMLELLNQLDGFEPTKNIKI 274
>gi|401828697|ref|XP_003888062.1| ATP-dependent 26S proteasome regulatory subunit [Encephalitozoon
hellem ATCC 50504]
gi|392999136|gb|AFM99081.1| ATP-dependent 26S proteasome regulatory subunit [Encephalitozoon
hellem ATCC 50504]
Length = 392
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 191/299 (63%), Positives = 233/299 (77%), Gaps = 30/299 (10%)
Query: 79 SEGF-KPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGE 137
SEGF K +Y K++ L++++A+K + LR L+ +R ELN +VR LREE+ ++QE S VG
Sbjct: 2 SEGFCKNFYSNKLDHLEVLIAKKAKVLRVLEQKRAELNRRVRFLREEISIVQEPSSNVGI 61
Query: 138 VVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLV 197
VV+ M K +VLVK +P+GK++V ++ ++ +D+ P RVALR++SY +H+ILP KVDPLV
Sbjct: 62 VVEKMGKMQVLVKTNPDGKYLVKVEHGVNYDDLKPGVRVALRSDSYDVHRILPTKVDPLV 121
Query: 198 SLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTG 257
SLMMVEKVPDSTY+M+GGLD QIKEI+EVIELP+KHPELF+ LGIAQPKGVLLYGPPGTG
Sbjct: 122 SLMMVEKVPDSTYQMIGGLDEQIKEIREVIELPIKHPELFENLGIAQPKGVLLYGPPGTG 181
Query: 258 KTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSL 317
KTLLARAVAHHT+C FIRVSGSELVQK+IGEGSR+VRELFVMA
Sbjct: 182 KTLLARAVAHHTQCKFIRVSGSELVQKYIGEGSRLVRELFVMA----------------- 224
Query: 318 LTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
REHAPSIIFMDEIDSIGS+R +S G DSEVQRTMLELLNQLDGFE+
Sbjct: 225 ------------REHAPSIIFMDEIDSIGSTRGDSNKGSDSEVQRTMLELLNQLDGFES 271
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/70 (67%), Positives = 54/70 (77%), Gaps = 4/70 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSR+VRELFVMAR S MD
Sbjct: 180 TGKTLLARAVAHHTQCKFIRVSGSELVQKYIGEGSRLVRELFVMAREHAPS----IIFMD 235
Query: 72 VDEAIKSSEG 81
++I S+ G
Sbjct: 236 EIDSIGSTRG 245
>gi|453083399|gb|EMF11445.1| 26S protease regulatory subunit 8 [Mycosphaerella populorum SO2202]
Length = 389
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 202/294 (68%), Positives = 233/294 (79%), Gaps = 29/294 (9%)
Query: 85 YYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDK 144
++ KIE ++L + + + LRRL+AQRNE N++VR+LREEL LLQ+ GSYVGEVVK M
Sbjct: 6 FFHNKIESMKLEIIQGQAVLRRLEAQRNEYNSRVRLLREELGLLQQPGSYVGEVVKVMGT 65
Query: 145 KKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEK 204
KKVLVKVHPEGK+VVD+ +IDI+ +T RV L ++SY L +LP+ VDPLVSLMMVEK
Sbjct: 66 KKVLVKVHPEGKYVVDVADSIDISKLTAGKRVTLLSDSYKLSSLLPSSVDPLVSLMMVEK 125
Query: 205 VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 264
VPDSTY+M+GGLD QIK+IKEVIEL ++HPELF++LGIAQPKGVLLYGPPGTGKTLLARA
Sbjct: 126 VPDSTYDMIGGLDEQIKQIKEVIELGLRHPELFESLGIAQPKGVLLYGPPGTGKTLLARA 185
Query: 265 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNT 324
VAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 186 VAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMA------------------------ 221
Query: 325 IVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGSSR+E SGGDSEVQRTMLELLNQLDGFE TK
Sbjct: 222 -----REHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFEPTK 270
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 53/68 (77%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMAR S MD
Sbjct: 177 TGKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPS----IIFMD 232
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 233 EIDSIGSS 240
>gi|346324323|gb|EGX93920.1| 26S protease regulatory subunit 8 [Cordyceps militaris CM01]
Length = 396
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 205/301 (68%), Positives = 233/301 (77%), Gaps = 36/301 (11%)
Query: 85 YYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDK 144
YY KIE ++L + + + LRRL+AQRN+ N++VR+LREEL LLQ+ GSYVGEVVK M
Sbjct: 6 YYHNKIEAMKLEILKGQAALRRLEAQRNDYNSRVRLLREELGLLQQPGSYVGEVVKVMGT 65
Query: 145 KKVLVKVHPEGKFV-------VDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLV 197
KKVLVKVHPEGK+V VDI N+D++ +T RV L ++SY L K+LP+ VDPLV
Sbjct: 66 KKVLVKVHPEGKYVILIHATVVDISDNVDVSKLTAGKRVTLLSDSYKLEKMLPSSVDPLV 125
Query: 198 SLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTG 257
SLMMVEKVPDSTY+M+GGLD QIKEIKEVIEL +KHPELF++LGIAQPKGVLLYGPPGTG
Sbjct: 126 SLMMVEKVPDSTYDMIGGLDQQIKEIKEVIELGLKHPELFESLGIAQPKGVLLYGPPGTG 185
Query: 258 KTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSL 317
KTLLARAVAHHT C FIRVSGSELVQK+IGEGSRMVRELF+MA
Sbjct: 186 KTLLARAVAHHTACKFIRVSGSELVQKYIGEGSRMVRELFIMA----------------- 228
Query: 318 LTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEAT 377
REHAPSIIFMDEIDSIGSSR+E SGGDSEVQRTMLELLNQLDGFE T
Sbjct: 229 ------------REHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFEPT 276
Query: 378 K 378
K
Sbjct: 277 K 277
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/98 (52%), Positives = 59/98 (60%), Gaps = 19/98 (19%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA--------------- 56
+GKTLLARAVAHHT C FIRVSGSELVQK+IGEGSRMVRELF+MA
Sbjct: 184 TGKTLLARAVAHHTACKFIRVSGSELVQKYIGEGSRMVRELFIMAREHAPSIIFMDEIDS 243
Query: 57 ----RCKGSSRGTEFFTMDVDEAIKSSEGFKPYYVTKI 90
R +GSS G + E + +GF+P KI
Sbjct: 244 IGSSRVEGSSGGDSEVQRTMLELLNQLDGFEPTKNIKI 281
>gi|167378685|ref|XP_001734886.1| 26S protease regulatory subunit [Entamoeba dispar SAW760]
gi|165903356|gb|EDR28931.1| 26S protease regulatory subunit, putative [Entamoeba dispar SAW760]
Length = 376
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 191/277 (68%), Positives = 220/277 (79%), Gaps = 29/277 (10%)
Query: 102 QNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDI 161
QN RRL ++RN+LN +VR ++EELQLL E VGEV+K + K KVLVK EGK+VV +
Sbjct: 10 QNQRRLISKRNQLNDQVRRMKEELQLLSEPSCSVGEVIKAVGKDKVLVKSAQEGKYVVKV 69
Query: 162 DKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIK 221
+ IDI + PN RVAL++++Y++ K+LPN+VDPLVSLM VEKVPDSTY+M+GGLD QIK
Sbjct: 70 EAGIDIKSLKPNQRVALKSDTYSICKVLPNQVDPLVSLMRVEKVPDSTYDMIGGLDQQIK 129
Query: 222 EIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSEL 281
EIKEVIELP+KHPELF++LGIAQPKGVLLYGPPGTGKTLLARAVAHHT+CTFIRVSG+EL
Sbjct: 130 EIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGTEL 189
Query: 282 VQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDE 341
VQK+IGEGSRMVRELFVMA REHAPSIIFMDE
Sbjct: 190 VQKYIGEGSRMVRELFVMA-----------------------------REHAPSIIFMDE 220
Query: 342 IDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
IDSIGSSRIE SGGDSEVQRTMLEL+NQLDGFE TK
Sbjct: 221 IDSIGSSRIEGKSGGDSEVQRTMLELVNQLDGFEPTK 257
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+CTFIRVSG+ELVQK+IGEGSRMVRELFVMAR S MD
Sbjct: 164 TGKTLLARAVAHHTDCTFIRVSGTELVQKYIGEGSRMVRELFVMAREHAPS----IIFMD 219
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 220 EIDSIGSS 227
>gi|399217791|emb|CCF74678.1| unnamed protein product [Babesia microti strain RI]
Length = 398
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 196/310 (63%), Positives = 233/310 (75%), Gaps = 37/310 (11%)
Query: 76 IKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYV 135
+++S YY KI + ++A++ QN +RL+A+RNELN KVR LREELQ L E GSYV
Sbjct: 1 METSACVDAYYRDKISTYESLLAQRLQNNKRLEARRNELNNKVRDLREELQALLEPGSYV 60
Query: 136 GEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDP 195
EV+KPM + KVLVK+ EGK+VVDI +IDI+ N RVAL ++SY LHKILP+KVDP
Sbjct: 61 AEVIKPMGQNKVLVKISLEGKYVVDISSDIDISKCVANTRVALLSDSYKLHKILPSKVDP 120
Query: 196 LVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPG 255
LV+LM VEKVPD+TYEM+GGLD QIK++KEVIELP+KHPE+F++LGIAQPKGVLLYGPPG
Sbjct: 121 LVALMKVEKVPDATYEMIGGLDEQIKQVKEVIELPIKHPEIFESLGIAQPKGVLLYGPPG 180
Query: 256 T-------GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFA 308
T GKTLLARAVAH T+CTFIRVSGSELVQK+IGEGSR+VRELFVMA
Sbjct: 181 TGTIFIYLGKTLLARAVAHETDCTFIRVSGSELVQKYIGEGSRIVRELFVMA-------- 232
Query: 309 HHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELL 368
R H+PSIIFMDEIDSIG R+E G GDSEVQRTMLELL
Sbjct: 233 ---------------------RAHSPSIIFMDEIDSIGGQRVE-GEQGDSEVQRTMLELL 270
Query: 369 NQLDGFEATK 378
NQLDGFE+++
Sbjct: 271 NQLDGFESSQ 280
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/54 (79%), Positives = 47/54 (87%)
Query: 9 WIVSGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
+I GKTLLARAVAH T+CTFIRVSGSELVQK+IGEGSR+VRELFVMAR S
Sbjct: 185 FIYLGKTLLARAVAHETDCTFIRVSGSELVQKYIGEGSRIVRELFVMARAHSPS 238
>gi|390599630|gb|EIN09026.1| endopeptidase [Punctularia strigosozonata HHB-11173 SS5]
Length = 408
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 216/306 (70%), Positives = 233/306 (76%), Gaps = 37/306 (12%)
Query: 81 GFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVK 140
G + YY KIE ++ + +K QNLRRL+AQRN LNA+VR+LREELQLL E GSYVGEVVK
Sbjct: 13 GIRAYYQAKIEAAEITINQKTQNLRRLEAQRNALNARVRLLREELQLLHEPGSYVGEVVK 72
Query: 141 PMDKKKVLVKVHPEGKF-------VVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKV 193
M K KVLVKV PEGK+ VVDID ID +TP RVALR++SYTLHK+LPNKV
Sbjct: 73 VMGKNKVLVKVQPEGKYTEQRSPVVVDIDSEIDQATLTPTLRVALRSDSYTLHKVLPNKV 132
Query: 194 DPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGP 253
DPLVSLMMVEKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELF+ALGIAQPKGVLLYGP
Sbjct: 133 DPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGP 192
Query: 254 PGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLL 313
PGTGKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 193 PGTGKTLLARAVAHHTDCRFIRVSGSELVQKYIGEGSRMVRELFVMA------------- 239
Query: 314 FWSLLTILTNTIVCNFREHAPSIIFMDEID-SIGSSRIESGSGGDSEVQRTMLELLNQLD 372
REHAPSIIFMDEID S S GDSEVQRTMLELLNQLD
Sbjct: 240 ----------------REHAPSIIFMDEIDSIGSSRGDGGSSSGDSEVQRTMLELLNQLD 283
Query: 373 GFEATK 378
GFE +K
Sbjct: 284 GFEPSK 289
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 42/46 (91%), Positives = 45/46 (97%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMAR
Sbjct: 195 TGKTLLARAVAHHTDCRFIRVSGSELVQKYIGEGSRMVRELFVMAR 240
>gi|50286501|ref|XP_445679.1| hypothetical protein [Candida glabrata CBS 138]
gi|49524984|emb|CAG58590.1| unnamed protein product [Candida glabrata]
Length = 400
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 199/300 (66%), Positives = 231/300 (77%), Gaps = 31/300 (10%)
Query: 81 GFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVK 140
G KPY+ KI+E +L + K +NLRRL+AQRN LN +VR +++EL+LLQE GSYVGEV+K
Sbjct: 11 GIKPYFEHKIQETELKIRGKTENLRRLEAQRNALNDEVRFIKDELRLLQEPGSYVGEVIK 70
Query: 141 PMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLM 200
+ KKVLVKV PEGK++VD+ K+I++ D+ + RV LR++SY LHK+L NK DPLVSLM
Sbjct: 71 VVSDKKVLVKVQPEGKYIVDVAKDINVKDLKASQRVCLRSDSYMLHKVLVNKADPLVSLM 130
Query: 201 MVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTL 260
MVEKVPDSTY+MVGGL QIKEIKEVIELPVKHPELF++LGIAQPKGV+LYGPPGTGKTL
Sbjct: 131 MVEKVPDSTYDMVGGLTKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTL 190
Query: 261 LARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTI 320
LARAVAHHT+C FIRVSG+ELVQK+IGEGSRMVRELFVMA
Sbjct: 191 LARAVAHHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMA-------------------- 230
Query: 321 LTNTIVCNFREHAPSIIFMDEIDSI--GSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSI GGDSEVQRTMLELLNQLDGFE +K
Sbjct: 231 ---------REHAPSIIFMDEIDSIGSSRVEGGGSGGGDSEVQRTMLELLNQLDGFETSK 281
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/46 (89%), Positives = 45/46 (97%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+C FIRVSG+ELVQK+IGEGSRMVRELFVMAR
Sbjct: 186 TGKTLLARAVAHHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMAR 231
>gi|403414515|emb|CCM01215.1| predicted protein [Fibroporia radiculosa]
Length = 1356
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 213/299 (71%), Positives = 231/299 (77%), Gaps = 30/299 (10%)
Query: 81 GFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVK 140
G + YY KIE +L + +K QNLRRL+AQRN LNA+VR+LREELQLL E GSYVGEVVK
Sbjct: 13 GIRAYYQAKIESAELDINQKTQNLRRLEAQRNALNARVRLLREELQLLHEPGSYVGEVVK 72
Query: 141 PMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLM 200
M K KVLVKV PEGK++VD D ID+ + RVALR++SYT+HKILPNKVDPLVSLM
Sbjct: 73 VMGKNKVLVKVQPEGKYIVDFDSEIDVASLKATLRVALRSDSYTIHKILPNKVDPLVSLM 132
Query: 201 MVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTL 260
MVEKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELF++LGIAQPKGVLLYGPPGTGKTL
Sbjct: 133 MVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFESLGIAQPKGVLLYGPPGTGKTL 192
Query: 261 LARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTI 320
LARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 193 LARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMA-------------------- 232
Query: 321 LTNTIVCNFREHAPSIIFMDEID-SIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEID S GGDSEVQRTMLELLNQLDGFE TK
Sbjct: 233 ---------REHAPSIIFMDEIDSIGSSRGESGSGGGDSEVQRTMLELLNQLDGFEPTK 282
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 42/46 (91%), Positives = 45/46 (97%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMAR
Sbjct: 188 TGKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAR 233
>gi|396082191|gb|AFN83802.1| 26S proteasome regulatory subunit 8 [Encephalitozoon romaleae
SJ-2008]
Length = 392
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 190/299 (63%), Positives = 233/299 (77%), Gaps = 30/299 (10%)
Query: 79 SEGF-KPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGE 137
+EGF K +Y K++ L++++A+K + LR L+ +R ELN +VR LREE+ ++QE S VG
Sbjct: 2 AEGFCKNFYNNKLDHLEVLIAKKAKVLRVLEQKRAELNRRVRFLREEISIVQEPSSNVGI 61
Query: 138 VVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLV 197
VV+ M K +VLVK +P+GK++V ++ ++ +D+ P RVALR++SY +H+ILP KVDPLV
Sbjct: 62 VVEKMGKMQVLVKTNPDGKYLVKVEHGVNYDDLRPGVRVALRSDSYDVHRILPTKVDPLV 121
Query: 198 SLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTG 257
SLMMVEKVPDSTY+M+GGLD QIKEI+EVIELP+KHPELF+ LGIAQPKGVLLYGPPGTG
Sbjct: 122 SLMMVEKVPDSTYQMIGGLDEQIKEIREVIELPIKHPELFENLGIAQPKGVLLYGPPGTG 181
Query: 258 KTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSL 317
KTLLARAVAHHT+C FIRVSGSELVQK+IGEGSR+VRELFVMA
Sbjct: 182 KTLLARAVAHHTQCKFIRVSGSELVQKYIGEGSRLVRELFVMA----------------- 224
Query: 318 LTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
REHAPSIIFMDEIDSIGS+R +S G DSEVQRTMLELLNQLDGFE+
Sbjct: 225 ------------REHAPSIIFMDEIDSIGSTRGDSNKGSDSEVQRTMLELLNQLDGFES 271
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/70 (67%), Positives = 54/70 (77%), Gaps = 4/70 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSR+VRELFVMAR S MD
Sbjct: 180 TGKTLLARAVAHHTQCKFIRVSGSELVQKYIGEGSRLVRELFVMAREHAPS----IIFMD 235
Query: 72 VDEAIKSSEG 81
++I S+ G
Sbjct: 236 EIDSIGSTRG 245
>gi|440301401|gb|ELP93787.1| 26S protease regulatory subunit, putative [Entamoeba invadens IP1]
Length = 398
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/294 (64%), Positives = 228/294 (77%), Gaps = 29/294 (9%)
Query: 85 YYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDK 144
YY +KI+ + + + Q+ RRL ++RN+LN +VR ++EE+QLL E VGEVV+ + K
Sbjct: 15 YYRSKIDSMTYEYSTQLQDQRRLVSKRNQLNEQVRKMKEEIQLLSEPSCSVGEVVRAVGK 74
Query: 145 KKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEK 204
KVLVK EGK++V ++ NI+I + N RVAL+ +SY++ K+LPN+VDPLVSLM VEK
Sbjct: 75 DKVLVKSAQEGKYIVSVEPNIEIKSLKTNQRVALKADSYSITKVLPNQVDPLVSLMRVEK 134
Query: 205 VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 264
VPDSTY+M+GGLD QIKEIKEVIELP+KHPELF++LGIAQPKGVLLYGPPGTGKTLLARA
Sbjct: 135 VPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARA 194
Query: 265 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNT 324
VAHHT+CTFIRVSG+ELVQK+IGEGSRMVRELFVMA
Sbjct: 195 VAHHTDCTFIRVSGTELVQKYIGEGSRMVRELFVMA------------------------ 230
Query: 325 IVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGS+R+E +GGDSEVQRTMLEL+NQLDGFE TK
Sbjct: 231 -----REHAPSIIFMDEIDSIGSTRVEGNNGGDSEVQRTMLELVNQLDGFEPTK 279
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/46 (91%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+CTFIRVSG+ELVQK+IGEGSRMVRELFVMAR
Sbjct: 186 TGKTLLARAVAHHTDCTFIRVSGTELVQKYIGEGSRMVRELFVMAR 231
>gi|396491345|ref|XP_003843546.1| similar to 26S protease regulatory subunit 8 [Leptosphaeria
maculans JN3]
gi|312220125|emb|CBY00067.1| similar to 26S protease regulatory subunit 8 [Leptosphaeria
maculans JN3]
Length = 389
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 199/294 (67%), Positives = 232/294 (78%), Gaps = 29/294 (9%)
Query: 85 YYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDK 144
++ KIE ++L + + + LRRL+AQRN+ N++VR+LREEL LLQ+ GSYVGEVVK M
Sbjct: 6 FFHNKIESMKLEIIQGQAKLRRLEAQRNDYNSRVRLLREELGLLQQPGSYVGEVVKVMGT 65
Query: 145 KKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEK 204
KKVLVKVHPEGK+VVD+ +D++ +T RV L ++SY L K+LP+ VDPLVSLMMVEK
Sbjct: 66 KKVLVKVHPEGKYVVDVADGVDLSKLTAGKRVTLLSDSYKLEKLLPSSVDPLVSLMMVEK 125
Query: 205 VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 264
VPDSTY+M+GGLD QIKEIKEVIEL ++HPELF++LGIAQPKGVLLYGPPGTGKTLLARA
Sbjct: 126 VPDSTYDMIGGLDQQIKEIKEVIELGLQHPELFESLGIAQPKGVLLYGPPGTGKTLLARA 185
Query: 265 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNT 324
VAHH +C FIRVSGSELVQK+IGEGSRMVRELF+MA
Sbjct: 186 VAHHADCKFIRVSGSELVQKYIGEGSRMVRELFIMA------------------------ 221
Query: 325 IVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGSSR+E SGGDSEVQRTMLELLNQLDGFE TK
Sbjct: 222 -----REHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFEPTK 270
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/98 (51%), Positives = 59/98 (60%), Gaps = 19/98 (19%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA--------------- 56
+GKTLLARAVAHH +C FIRVSGSELVQK+IGEGSRMVRELF+MA
Sbjct: 177 TGKTLLARAVAHHADCKFIRVSGSELVQKYIGEGSRMVRELFIMAREHAPSIIFMDEIDS 236
Query: 57 ----RCKGSSRGTEFFTMDVDEAIKSSEGFKPYYVTKI 90
R +GSS G + E + +GF+P KI
Sbjct: 237 IGSSRVEGSSGGDSEVQRTMLELLNQLDGFEPTKNIKI 274
>gi|303390889|ref|XP_003073675.1| 26S proteasome regulatory subunit 8 [Encephalitozoon intestinalis
ATCC 50506]
gi|303302822|gb|ADM12315.1| 26S proteasome regulatory subunit 8 [Encephalitozoon intestinalis
ATCC 50506]
Length = 392
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 188/298 (63%), Positives = 231/298 (77%), Gaps = 30/298 (10%)
Query: 80 EGF-KPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEV 138
EGF K +Y K++ L++++A+K + LR L+ +R ELN +VR LREE+ ++QE S VG +
Sbjct: 3 EGFCKNFYSNKLDHLEVLIAKKSKVLRVLEQKRAELNRRVRFLREEISIVQEPSSNVGVI 62
Query: 139 VKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVS 198
V+ M K +VLVK +P+GK++ ++ ++ +D+ P RVALR++SY +H+ILP KVDPLVS
Sbjct: 63 VEKMGKMQVLVKTNPDGKYLAKVEPGVNYDDLKPGVRVALRSDSYDVHRILPTKVDPLVS 122
Query: 199 LMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGK 258
LMMVEKVPDSTY+M+GGLD QIKEI+EVIELP+KHPELF+ LGIAQPKGVLLYGPPGTGK
Sbjct: 123 LMMVEKVPDSTYQMIGGLDEQIKEIREVIELPIKHPELFENLGIAQPKGVLLYGPPGTGK 182
Query: 259 TLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLL 318
TLLARAVAHHT+C FIRVSGSELVQK+IGEGSR+VRELFVMA
Sbjct: 183 TLLARAVAHHTQCKFIRVSGSELVQKYIGEGSRLVRELFVMA------------------ 224
Query: 319 TILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
REHAPSIIFMDEIDSIGS+R +S G DSEVQRTMLELLNQLDGFE+
Sbjct: 225 -----------REHAPSIIFMDEIDSIGSTRGDSNKGSDSEVQRTMLELLNQLDGFES 271
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/70 (67%), Positives = 54/70 (77%), Gaps = 4/70 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSR+VRELFVMAR S MD
Sbjct: 180 TGKTLLARAVAHHTQCKFIRVSGSELVQKYIGEGSRLVRELFVMAREHAPS----IIFMD 235
Query: 72 VDEAIKSSEG 81
++I S+ G
Sbjct: 236 EIDSIGSTRG 245
>gi|156063050|ref|XP_001597447.1| hypothetical protein SS1G_01641 [Sclerotinia sclerotiorum 1980]
gi|154696977|gb|EDN96715.1| hypothetical protein SS1G_01641 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 391
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 203/296 (68%), Positives = 234/296 (79%), Gaps = 31/296 (10%)
Query: 85 YYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDK 144
++ KIE ++L + + + LRRL+AQRN+ N++VR+LREEL LLQ+ GSYVGEVVK M
Sbjct: 6 FFHNKIESMKLEIIQGQAVLRRLEAQRNDYNSRVRLLREELGLLQQPGSYVGEVVKVMGT 65
Query: 145 KKVLVKVHPEGKF--VVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMV 202
KKVLVKVHPEGK+ VVDI ++DI+ +T RV L ++SY L K+LP+ VDPLVSLMMV
Sbjct: 66 KKVLVKVHPEGKYDKVVDIADSVDISKLTVGKRVTLLSDSYKLEKMLPSSVDPLVSLMMV 125
Query: 203 EKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 262
EKVPDSTY+M+GGLD Q+KEIKEVIEL +KHPELF++LGIAQPKGVLLYGPPGTGKTLLA
Sbjct: 126 EKVPDSTYDMIGGLDQQVKEIKEVIELGLKHPELFESLGIAQPKGVLLYGPPGTGKTLLA 185
Query: 263 RAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILT 322
RAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 186 RAVAHHTDCRFIRVSGSELVQKYIGEGSRMVRELFVMA---------------------- 223
Query: 323 NTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGSSR+E SGGDSEVQRTMLELLNQLDGFE TK
Sbjct: 224 -------REHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFEPTK 272
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 53/68 (77%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMAR S MD
Sbjct: 179 TGKTLLARAVAHHTDCRFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPS----IIFMD 234
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 235 EIDSIGSS 242
>gi|449296968|gb|EMC92987.1| hypothetical protein BAUCODRAFT_37896 [Baudoinia compniacensis UAMH
10762]
Length = 376
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 200/286 (69%), Positives = 227/286 (79%), Gaps = 29/286 (10%)
Query: 93 LQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVH 152
++L + + + LRRL+AQRNE N++VR+LREEL LLQ+ GSYVGEVVK M KKVLVKVH
Sbjct: 1 MKLEILQGQAVLRRLEAQRNEYNSRVRLLREELGLLQQPGSYVGEVVKAMGTKKVLVKVH 60
Query: 153 PEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEM 212
PEGK+VVD+ +IDI +T RV L ++SY L +LP+ VDPLVSLMMVEKVPDSTY+M
Sbjct: 61 PEGKYVVDVADSIDIAKLTAGKRVTLLSDSYKLSSLLPSSVDPLVSLMMVEKVPDSTYDM 120
Query: 213 VGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECT 272
+GGLD QIK+IKEVIEL +KHPELF++LGIAQPKGVLLYGPPGTGKTLLARAVAHHT+C
Sbjct: 121 IGGLDEQIKQIKEVIELGLKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCK 180
Query: 273 FIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREH 332
FIRVSGSELVQK+IGEGSRMVRELFVMA REH
Sbjct: 181 FIRVSGSELVQKYIGEGSRMVRELFVMA-----------------------------REH 211
Query: 333 APSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
APSIIFMDEIDSIGSSR+E SGGDSEVQRTMLELLNQLDGFE TK
Sbjct: 212 APSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFEPTK 257
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 53/68 (77%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMAR S MD
Sbjct: 164 TGKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPS----IIFMD 219
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 220 EIDSIGSS 227
>gi|300708503|ref|XP_002996429.1| hypothetical protein NCER_100476 [Nosema ceranae BRL01]
gi|239605731|gb|EEQ82758.1| hypothetical protein NCER_100476 [Nosema ceranae BRL01]
Length = 392
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 183/301 (60%), Positives = 235/301 (78%), Gaps = 29/301 (9%)
Query: 78 SSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGE 137
S+ + +YV +I+++ +++ +K+++L L+ +R+ELN ++R+LREE+ ++QE S VG
Sbjct: 2 STSYCRDFYVNEIDKIDVLIEKKKKSLLHLEQERSELNKQIRILREEISIVQEPSSNVGT 61
Query: 138 VVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLV 197
V + M ++V+VK P+GK++V ++ +++ +++ P RVALR++SY +H+ILP KVDPLV
Sbjct: 62 VSEKMGNRQVIVKTSPDGKYLVKVEPHVNYDELKPGVRVALRSDSYEVHRILPLKVDPLV 121
Query: 198 SLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTG 257
SLMMVEKVPDSTY M+GGLD QIKEI+EVIELP+KHPELF+ LGIAQPKGVLLYGPPGTG
Sbjct: 122 SLMMVEKVPDSTYAMIGGLDEQIKEIQEVIELPIKHPELFENLGIAQPKGVLLYGPPGTG 181
Query: 258 KTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSL 317
KTLLARAVAHHT+C FIRVSGSELVQK+IGEGSR+VRELFVMA
Sbjct: 182 KTLLARAVAHHTKCKFIRVSGSELVQKYIGEGSRLVRELFVMA----------------- 224
Query: 318 LTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEAT 377
REHAPSIIFMDEIDSIGSSR +S SGGDSEVQRTMLELLNQLDGFE+
Sbjct: 225 ------------REHAPSIIFMDEIDSIGSSRTDSSSGGDSEVQRTMLELLNQLDGFESQ 272
Query: 378 K 378
+
Sbjct: 273 Q 273
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/105 (54%), Positives = 68/105 (64%), Gaps = 11/105 (10%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSR+VRELFVMAR S MD
Sbjct: 180 TGKTLLARAVAHHTKCKFIRVSGSELVQKYIGEGSRLVRELFVMAREHAPS----IIFMD 235
Query: 72 VDEAIKSSE------GFKPYYVTKIEEL-QLIVAEKEQNLRRLQA 109
++I SS G T +E L QL E +QN++ + A
Sbjct: 236 EIDSIGSSRTDSSSGGDSEVQRTMLELLNQLDGFESQQNIKVIMA 280
>gi|326470321|gb|EGD94330.1| 26S protease regulatory subunit 8 [Trichophyton tonsurans CBS
112818]
gi|326481161|gb|EGE05171.1| 26S protease regulatory subunit 8 [Trichophyton equinum CBS 127.97]
Length = 400
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 204/305 (66%), Positives = 233/305 (76%), Gaps = 40/305 (13%)
Query: 85 YYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDK 144
YY KIE ++L + + + LRRL+AQRN+ N++VR+LREEL LLQ+ GSYVGEVVK M
Sbjct: 6 YYRNKIESMKLEIIQGQAVLRRLEAQRNDYNSRVRLLREELGLLQQPGSYVGEVVKVMGT 65
Query: 145 KKVLVKVHPEGKF-----------VVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKV 193
KKVLVKVHPEGK+ +VDI +DI +T RV+L +++Y L K+LP+ V
Sbjct: 66 KKVLVKVHPEGKYGKFTLESVHRSLVDIADGVDIAKLTVGKRVSLLSDTYKLEKMLPSSV 125
Query: 194 DPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGP 253
DPLVSLMMVEKVPDSTY+M+GGLD QIKEIKEVIEL +KHPELF++LGIAQPKGVLLYGP
Sbjct: 126 DPLVSLMMVEKVPDSTYDMIGGLDQQIKEIKEVIELGLKHPELFESLGIAQPKGVLLYGP 185
Query: 254 PGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLL 313
PGTGKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 186 PGTGKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMA------------- 232
Query: 314 FWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDG 373
REHAPSIIFMDEIDSIGSSR+E SGGDSEVQRTMLELLNQLDG
Sbjct: 233 ----------------REHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDG 276
Query: 374 FEATK 378
FE TK
Sbjct: 277 FEPTK 281
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/98 (53%), Positives = 60/98 (61%), Gaps = 19/98 (19%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA--------------- 56
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 188 TGKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDS 247
Query: 57 ----RCKGSSRGTEFFTMDVDEAIKSSEGFKPYYVTKI 90
R +GSS G + E + +GF+P KI
Sbjct: 248 IGSSRVEGSSGGDSEVQRTMLELLNQLDGFEPTKNIKI 285
>gi|342320107|gb|EGU12050.1| Endopeptidase [Rhodotorula glutinis ATCC 204091]
Length = 409
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 215/302 (71%), Positives = 234/302 (77%), Gaps = 31/302 (10%)
Query: 79 SEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEV 138
+ G Y+ +KIE + ++ K Q+LRRL+AQRN LNA+VR+LREELQLLQE GSYVGEV
Sbjct: 18 AAGLTSYFSSKIEAAEQLIHTKSQDLRRLEAQRNALNARVRLLREELQLLQEPGSYVGEV 77
Query: 139 VKPMDKKKVLVKVHPEGKF-VVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLV 197
+K M KKKVLVKV PEGK+ VVD NID+ +TPN RVALR++SY LH ILP K DPLV
Sbjct: 78 IKVMGKKKVLVKVQPEGKYAVVDFASNIDVAQLTPNLRVALRSDSYQLHSILPTKQDPLV 137
Query: 198 SLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTG 257
+LMMVEKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTG
Sbjct: 138 ALMMVEKVPDSTYEMVGGLDQQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTG 197
Query: 258 KTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSL 317
KTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 198 KTLLARAVAHHTDCRFIRVSGSELVQKYIGEGSRMVRELFVMA----------------- 240
Query: 318 LTILTNTIVCNFREHAPSIIFMDEID-SIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
REHAPSIIFMDEID S G GGDSEVQRTMLELLNQLDGFEA
Sbjct: 241 ------------REHAPSIIFMDEIDSIGSSRGGSGGGGGDSEVQRTMLELLNQLDGFEA 288
Query: 377 TK 378
TK
Sbjct: 289 TK 290
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/46 (91%), Positives = 45/46 (97%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMAR
Sbjct: 196 TGKTLLARAVAHHTDCRFIRVSGSELVQKYIGEGSRMVRELFVMAR 241
>gi|154346282|ref|XP_001569078.1| proteasome regulatory ATPase subunit [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134066420|emb|CAM44212.1| proteasome regulatory ATPase subunit [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 409
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 193/303 (63%), Positives = 226/303 (74%), Gaps = 31/303 (10%)
Query: 78 SSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGE 137
S+ Y++ KI EL+ N +RL+AQRN+LN +VR L+EE+Q+LQE GS V +
Sbjct: 17 SNTAVSDYFLQKIHELRATQKRTLDNFQRLEAQRNDLNRRVRHLKEEVQMLQESGSLVVD 76
Query: 138 VVKPMDKKKVLVKVHP-EGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPL 196
VV+ M K KVLVK +GK VVD+DK +D ++TPN RVALR+ + +H ILP KVDPL
Sbjct: 77 VVRVMGKNKVLVKADSGQGKMVVDVDKTVDFKELTPNARVALRSGTSAIHYILPTKVDPL 136
Query: 197 VSLMMVEKV-PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPG 255
VSLM VEK +STY+ +GGL Q+KEIKEVIELPVKHP+LF+ALGI QPKGVLLYGPPG
Sbjct: 137 VSLMKVEKAGKESTYDEIGGLSRQVKEIKEVIELPVKHPKLFEALGIEQPKGVLLYGPPG 196
Query: 256 TGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFW 315
TGKTLLARAVAHHTECTFIRVSG+ELVQK+IGEG+RMVRELFVMA
Sbjct: 197 TGKTLLARAVAHHTECTFIRVSGAELVQKYIGEGARMVRELFVMA--------------- 241
Query: 316 SLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
REH+PSIIFMDEIDSIGSSR+ESG GDSEVQRTMLELLNQLDGFE
Sbjct: 242 --------------REHSPSIIFMDEIDSIGSSRLESGENGDSEVQRTMLELLNQLDGFE 287
Query: 376 ATK 378
A+K
Sbjct: 288 ASK 290
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHTECTFIRVSG+ELVQK+IGEG+RMVRELFVMAR S MD
Sbjct: 197 TGKTLLARAVAHHTECTFIRVSGAELVQKYIGEGARMVRELFVMAREHSPS----IIFMD 252
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 253 EIDSIGSS 260
>gi|146105219|ref|XP_001470007.1| proteasome regulatory ATPase subunit [Leishmania infantum JPCM5]
gi|398024820|ref|XP_003865571.1| proteasome regulatory ATPase subunit [Leishmania donovani]
gi|134074377|emb|CAM73128.1| proteasome regulatory ATPase subunit [Leishmania infantum JPCM5]
gi|322503808|emb|CBZ38894.1| proteasome regulatory ATPase subunit [Leishmania donovani]
Length = 409
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 193/303 (63%), Positives = 226/303 (74%), Gaps = 31/303 (10%)
Query: 78 SSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGE 137
S+ Y++ KI EL+ N RL+AQRN+LN +VR L+EE+Q+LQE GS V +
Sbjct: 17 SNTAVSDYFLQKIHELRATQKRTLDNFERLEAQRNDLNRRVRHLKEEVQMLQESGSLVVD 76
Query: 138 VVKPMDKKKVLVKVHP-EGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPL 196
VV+ M K KVLVK +GK VVD+DK++D D+TPN RVALR+ + +H ILP KVDPL
Sbjct: 77 VVRVMGKNKVLVKAGSGQGKMVVDVDKSVDFKDLTPNARVALRSGTSAIHYILPTKVDPL 136
Query: 197 VSLMMVEKV-PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPG 255
VSLM VEK +STY+ +GGL Q+KEIKEVIELPVKHP+LF+ALGI QPKGVLLYGPPG
Sbjct: 137 VSLMKVEKAGKESTYDEIGGLSRQVKEIKEVIELPVKHPKLFEALGIEQPKGVLLYGPPG 196
Query: 256 TGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFW 315
TGKTLLARAVAHHT+CTFIRVSG+ELVQK+IGEG+RMVRELFVMA
Sbjct: 197 TGKTLLARAVAHHTDCTFIRVSGAELVQKYIGEGARMVRELFVMA--------------- 241
Query: 316 SLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
REH+PSIIFMDEIDSIGSSR+ESG GDSEVQRTMLELLNQLDGFE
Sbjct: 242 --------------REHSPSIIFMDEIDSIGSSRLESGENGDSEVQRTMLELLNQLDGFE 287
Query: 376 ATK 378
A+K
Sbjct: 288 ASK 290
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+CTFIRVSG+ELVQK+IGEG+RMVRELFVMAR S MD
Sbjct: 197 TGKTLLARAVAHHTDCTFIRVSGAELVQKYIGEGARMVRELFVMAREHSPS----IIFMD 252
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 253 EIDSIGSS 260
>gi|341039065|gb|EGS24057.1| 26S protease regulatory subunit 8-like protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 389
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 206/294 (70%), Positives = 235/294 (79%), Gaps = 29/294 (9%)
Query: 85 YYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDK 144
YY KIE ++L + + + LRRL+AQRN+ N++VR+LREEL LLQ+ GSYVGEVVK M
Sbjct: 6 YYQNKIEAMRLEIIKGQAVLRRLEAQRNDYNSRVRLLREELGLLQQPGSYVGEVVKVMST 65
Query: 145 KKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEK 204
KKVLVKVHPEGK+VVD+ ++D++ +TP RV L ++SY L KILP+ VDPLVSLMMVEK
Sbjct: 66 KKVLVKVHPEGKYVVDVADSVDVSKLTPGKRVTLLSDSYKLEKILPSSVDPLVSLMMVEK 125
Query: 205 VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 264
VPDSTY+M+GGLD QIKEIKEVIEL +KHPELF++LGIAQPKGVLLYGPPGTGKTLLARA
Sbjct: 126 VPDSTYDMIGGLDQQIKEIKEVIELGLKHPELFESLGIAQPKGVLLYGPPGTGKTLLARA 185
Query: 265 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNT 324
VAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 186 VAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMA------------------------ 221
Query: 325 IVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGSSR+E SGGDSEVQRTMLELLNQLDGFE TK
Sbjct: 222 -----REHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFEPTK 270
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 53/68 (77%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMAR S MD
Sbjct: 177 TGKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPS----IIFMD 232
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 233 EIDSIGSS 240
>gi|401420610|ref|XP_003874794.1| proteasome regulatory ATPase subunit [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322491030|emb|CBZ26294.1| proteasome regulatory ATPase subunit [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 409
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 193/303 (63%), Positives = 226/303 (74%), Gaps = 31/303 (10%)
Query: 78 SSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGE 137
S+ Y++ KI EL+ N RL+AQRN+LN +VR L+EE+Q+LQE GS V +
Sbjct: 17 SNTAVSDYFLQKIHELRATQKRTLDNFERLEAQRNDLNRRVRHLKEEVQMLQESGSLVVD 76
Query: 138 VVKPMDKKKVLVKVHP-EGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPL 196
VV+ M K KVLVK +GK VVD+DK++D D+TPN RVALR+ + +H ILP KVDPL
Sbjct: 77 VVRVMGKNKVLVKAGSGQGKMVVDVDKSVDFKDLTPNARVALRSGTSAIHYILPTKVDPL 136
Query: 197 VSLMMVEKV-PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPG 255
VSLM VEK +STY+ +GGL Q+KEIKEVIELPVKHP+LF+ALGI QPKGVLLYGPPG
Sbjct: 137 VSLMKVEKAGKESTYDEIGGLSRQVKEIKEVIELPVKHPKLFEALGIEQPKGVLLYGPPG 196
Query: 256 TGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFW 315
TGKTLLARAVAHHT+CTFIRVSG+ELVQK+IGEG+RMVRELFVMA
Sbjct: 197 TGKTLLARAVAHHTDCTFIRVSGAELVQKYIGEGARMVRELFVMA--------------- 241
Query: 316 SLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
REH+PSIIFMDEIDSIGSSR+ESG GDSEVQRTMLELLNQLDGFE
Sbjct: 242 --------------REHSPSIIFMDEIDSIGSSRLESGENGDSEVQRTMLELLNQLDGFE 287
Query: 376 ATK 378
A+K
Sbjct: 288 ASK 290
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+CTFIRVSG+ELVQK+IGEG+RMVRELFVMAR S MD
Sbjct: 197 TGKTLLARAVAHHTDCTFIRVSGAELVQKYIGEGARMVRELFVMAREHSPS----IIFMD 252
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 253 EIDSIGSS 260
>gi|403215567|emb|CCK70066.1| hypothetical protein KNAG_0D03200 [Kazachstania naganishii CBS
8797]
Length = 400
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 194/302 (64%), Positives = 233/302 (77%), Gaps = 33/302 (10%)
Query: 81 GFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVK 140
G +P++ K++E +L++ K +N+RRL+AQRN LN +VR +++EL+LLQE GSYVGEV+K
Sbjct: 9 GVRPFFEQKVQETELLIRAKSENVRRLEAQRNTLNERVRFIKDELRLLQEPGSYVGEVLK 68
Query: 141 PMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLM 200
+ KVLVKV PEGK++VD+ K+I++ ++ + RV L+++SY LHK+L NK DPLVSLM
Sbjct: 69 VISDTKVLVKVQPEGKYIVDVAKDINVKELKVSQRVCLKSDSYMLHKVLENKADPLVSLM 128
Query: 201 MVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTL 260
MVEKVPDSTY+MVGGL QIKEIKEVIELPVKHPELF++LGIAQPKGV+LYGPPGTGKTL
Sbjct: 129 MVEKVPDSTYDMVGGLTKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTL 188
Query: 261 LARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTI 320
LARAVAHHT+C FIRVSG+ELVQK+IGEGSRMVRELFVMA
Sbjct: 189 LARAVAHHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMA-------------------- 228
Query: 321 LTNTIVCNFREHAPSIIFMDEIDSI----GSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
REHAPSIIFMDEIDSI S G GGDSEVQRTMLELLNQLDGFE
Sbjct: 229 ---------REHAPSIIFMDEIDSIGSSRVESSSGGGGGGDSEVQRTMLELLNQLDGFET 279
Query: 377 TK 378
+K
Sbjct: 280 SK 281
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/46 (89%), Positives = 45/46 (97%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+C FIRVSG+ELVQK+IGEGSRMVRELFVMAR
Sbjct: 184 TGKTLLARAVAHHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMAR 229
>gi|157877405|ref|XP_001687020.1| proteasome regulatory ATPase subunit [Leishmania major strain
Friedlin]
gi|68130095|emb|CAJ09403.1| proteasome regulatory ATPase subunit [Leishmania major strain
Friedlin]
Length = 410
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 192/296 (64%), Positives = 224/296 (75%), Gaps = 31/296 (10%)
Query: 85 YYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDK 144
Y++ KI EL+ N RL+AQRN+LN +VR L+EE+Q+LQE GS V +VV+ M K
Sbjct: 25 YFLQKIHELRATQKRTLDNFERLEAQRNDLNRRVRHLKEEVQMLQESGSLVVDVVRVMGK 84
Query: 145 KKVLVKVHP-EGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVE 203
KVLVK +GK VVD+DK++D D+TPN RVALR+ + +H ILP KVDPLVSLM VE
Sbjct: 85 NKVLVKAGSGQGKMVVDVDKSVDFKDLTPNARVALRSGTSAIHYILPTKVDPLVSLMKVE 144
Query: 204 KV-PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 262
K +STY+ +GGL Q+KEIKEVIELPVKHP+LF+ALGI QPKGVLLYGPPGTGKTLLA
Sbjct: 145 KAGKESTYDEIGGLSRQVKEIKEVIELPVKHPKLFEALGIEQPKGVLLYGPPGTGKTLLA 204
Query: 263 RAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILT 322
RAVAHHT+CTFIRVSG+ELVQK+IGEG+RMVRELFVMA
Sbjct: 205 RAVAHHTDCTFIRVSGAELVQKYIGEGARMVRELFVMA---------------------- 242
Query: 323 NTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REH+PSIIFMDEIDSIGSSR+ESG GDSEVQRTMLELLNQLDGFEA+K
Sbjct: 243 -------REHSPSIIFMDEIDSIGSSRLESGENGDSEVQRTMLELLNQLDGFEASK 291
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+CTFIRVSG+ELVQK+IGEG+RMVRELFVMAR S MD
Sbjct: 198 TGKTLLARAVAHHTDCTFIRVSGAELVQKYIGEGARMVRELFVMAREHSPS----IIFMD 253
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 254 EIDSIGSS 261
>gi|85014485|ref|XP_955738.1| 26S proteasome regulatory subunit 8 [Encephalitozoon cuniculi
GB-M1]
gi|74697469|sp|Q8SQK0.1|PRS8_ENCCU RecName: Full=26S protease regulatory subunit 8 homolog
gi|449330049|gb|AGE96314.1| 26S proteasome regulatory subunit 8 [Encephalitozoon cuniculi]
Length = 453
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 187/301 (62%), Positives = 232/301 (77%), Gaps = 30/301 (9%)
Query: 77 KSSEGF-KPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYV 135
+ +EGF K +Y K++ L++ +A+K + LR L+ +R ELN +VR LREE+ ++QE S V
Sbjct: 61 RMAEGFCKNFYSNKLDHLEVQIAKKTKILRVLEQKRAELNRRVRFLREEISIVQEPSSNV 120
Query: 136 GEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDP 195
G VV+ M K +VLVK +P+GK++V ++ ++ +++ RVALR++SY +H+ILP KVDP
Sbjct: 121 GVVVEKMGKMQVLVKTNPDGKYLVKVEPGVNYDELKAGVRVALRSDSYDVHRILPTKVDP 180
Query: 196 LVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPG 255
LVSLMMVEKVPDSTY+M+GGLD QIKEI+EVIELP+KHPELF+ LGIAQPKGVLLYGPPG
Sbjct: 181 LVSLMMVEKVPDSTYQMIGGLDEQIKEIREVIELPIKHPELFENLGIAQPKGVLLYGPPG 240
Query: 256 TGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFW 315
TGKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSR+VRELF+MA
Sbjct: 241 TGKTLLARAVAHHTQCKFIRVSGSELVQKYIGEGSRLVRELFIMA--------------- 285
Query: 316 SLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
REHAPSIIFMDEIDSIGS+R +S G DSEVQRTMLELLNQLDGFE
Sbjct: 286 --------------REHAPSIIFMDEIDSIGSTRGDSNKGSDSEVQRTMLELLNQLDGFE 331
Query: 376 A 376
+
Sbjct: 332 S 332
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 46/70 (65%), Positives = 54/70 (77%), Gaps = 4/70 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSR+VRELF+MAR S MD
Sbjct: 241 TGKTLLARAVAHHTQCKFIRVSGSELVQKYIGEGSRLVRELFIMAREHAPS----IIFMD 296
Query: 72 VDEAIKSSEG 81
++I S+ G
Sbjct: 297 EIDSIGSTRG 306
>gi|392513022|emb|CAD27157.2| 26S PROTEASOME REGULATORY SUBUNIT 8 [Encephalitozoon cuniculi
GB-M1]
Length = 392
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 187/299 (62%), Positives = 231/299 (77%), Gaps = 30/299 (10%)
Query: 79 SEGF-KPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGE 137
+EGF K +Y K++ L++ +A+K + LR L+ +R ELN +VR LREE+ ++QE S VG
Sbjct: 2 AEGFCKNFYSNKLDHLEVQIAKKTKILRVLEQKRAELNRRVRFLREEISIVQEPSSNVGV 61
Query: 138 VVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLV 197
VV+ M K +VLVK +P+GK++V ++ ++ +++ RVALR++SY +H+ILP KVDPLV
Sbjct: 62 VVEKMGKMQVLVKTNPDGKYLVKVEPGVNYDELKAGVRVALRSDSYDVHRILPTKVDPLV 121
Query: 198 SLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTG 257
SLMMVEKVPDSTY+M+GGLD QIKEI+EVIELP+KHPELF+ LGIAQPKGVLLYGPPGTG
Sbjct: 122 SLMMVEKVPDSTYQMIGGLDEQIKEIREVIELPIKHPELFENLGIAQPKGVLLYGPPGTG 181
Query: 258 KTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSL 317
KTLLARAVAHHT+C FIRVSGSELVQK+IGEGSR+VRELF+MA
Sbjct: 182 KTLLARAVAHHTQCKFIRVSGSELVQKYIGEGSRLVRELFIMA----------------- 224
Query: 318 LTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
REHAPSIIFMDEIDSIGS+R +S G DSEVQRTMLELLNQLDGFE+
Sbjct: 225 ------------REHAPSIIFMDEIDSIGSTRGDSNKGSDSEVQRTMLELLNQLDGFES 271
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/70 (65%), Positives = 54/70 (77%), Gaps = 4/70 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSR+VRELF+MAR S MD
Sbjct: 180 TGKTLLARAVAHHTQCKFIRVSGSELVQKYIGEGSRLVRELFIMAREHAPS----IIFMD 235
Query: 72 VDEAIKSSEG 81
++I S+ G
Sbjct: 236 EIDSIGSTRG 245
>gi|392578098|gb|EIW71226.1| hypothetical protein TREMEDRAFT_60161 [Tremella mesenterica DSM
1558]
Length = 403
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 220/298 (73%), Positives = 237/298 (79%), Gaps = 33/298 (11%)
Query: 82 FKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKP 141
K YY KIE +L + +K QNLRRL+AQRN LN +VR+LREELQLLQE GSYVGEVVK
Sbjct: 19 IKTYYQNKIEAAELEITKKTQNLRRLEAQRNALNTRVRLLREELQLLQEPGSYVGEVVKV 78
Query: 142 MDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMM 201
M KKKVLVKV PEGKFVVD+ +I + +TPN RV+LR +SYTL ILP+KVDPLVSLMM
Sbjct: 79 MSKKKVLVKVSPEGKFVVDLSPDIPASSLTPNLRVSLRADSYTLQSILPSKVDPLVSLMM 138
Query: 202 VEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLL 261
VEKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELF+ALGIAQPKGVLLYGPPGTGKTLL
Sbjct: 139 VEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLL 198
Query: 262 ARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTIL 321
ARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 199 ARAVAHHTDCRFIRVSGSELVQKYIGEGSRMVRELFVMA--------------------- 237
Query: 322 TNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSG-GDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGSSR G G GDSEVQRTM+ELLNQLDGFE TK
Sbjct: 238 --------REHAPSIIFMDEIDSIGSSR---GDGKGDSEVQRTMMELLNQLDGFEPTK 284
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/70 (70%), Positives = 54/70 (77%), Gaps = 4/70 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMAR S MD
Sbjct: 193 TGKTLLARAVAHHTDCRFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPS----IIFMD 248
Query: 72 VDEAIKSSEG 81
++I SS G
Sbjct: 249 EIDSIGSSRG 258
>gi|367053940|ref|XP_003657348.1| hypothetical protein THITE_2122931 [Thielavia terrestris NRRL 8126]
gi|347004614|gb|AEO71012.1| hypothetical protein THITE_2122931 [Thielavia terrestris NRRL 8126]
Length = 389
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 206/294 (70%), Positives = 233/294 (79%), Gaps = 29/294 (9%)
Query: 85 YYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDK 144
YY KIE +QL + + + LRRL+AQRN+ N++VR+LREEL LLQ+ GSYVGEVVK M
Sbjct: 6 YYHNKIEAMQLEILKGQAVLRRLEAQRNDYNSRVRLLREELGLLQQPGSYVGEVVKVMST 65
Query: 145 KKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEK 204
KKVLVKVHPEGK+VVD+ ++D+ +T RV L ++SY L KILP+ VDPLVSLMMVEK
Sbjct: 66 KKVLVKVHPEGKYVVDVADSVDVTKLTVGKRVTLLSDSYKLEKILPSSVDPLVSLMMVEK 125
Query: 205 VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 264
VPDSTY+M+GGLD QIKEIKEVIEL +KHPELF++LGIAQPKGVLLYGPPGTGKTLLARA
Sbjct: 126 VPDSTYDMIGGLDQQIKEIKEVIELGLKHPELFESLGIAQPKGVLLYGPPGTGKTLLARA 185
Query: 265 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNT 324
VAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 186 VAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMA------------------------ 221
Query: 325 IVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGSSR+E SGGDSEVQRTMLELLNQLDGFE TK
Sbjct: 222 -----REHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFEPTK 270
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 53/68 (77%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMAR S MD
Sbjct: 177 TGKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPS----IIFMD 232
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 233 EIDSIGSS 240
>gi|46109446|ref|XP_381781.1| hypothetical protein FG01605.1 [Gibberella zeae PH-1]
gi|408390430|gb|EKJ69829.1| hypothetical protein FPSE_09998 [Fusarium pseudograminearum CS3096]
Length = 389
Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust.
Identities = 204/294 (69%), Positives = 233/294 (79%), Gaps = 29/294 (9%)
Query: 85 YYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDK 144
YY KIE ++L + + + LRRL+AQRN+ N++VR+LREEL LLQ+ GSYVGEVVK M
Sbjct: 6 YYHNKIEAMKLEILKGQAALRRLEAQRNDYNSRVRLLREELGLLQQPGSYVGEVVKVMST 65
Query: 145 KKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEK 204
KK+LVKVHPEGK+VVD+ ++D+ +TP RV L ++SY L K+LP+ VDPLVSLMMVEK
Sbjct: 66 KKILVKVHPEGKYVVDVSDSVDVAKLTPGKRVTLLSDSYKLEKMLPSSVDPLVSLMMVEK 125
Query: 205 VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 264
VPDSTY+M+GGLD QIKEIKEVIEL +KHPELF++LGIAQPKGVLLYGPPGTGKTLLARA
Sbjct: 126 VPDSTYDMIGGLDQQIKEIKEVIELGLKHPELFESLGIAQPKGVLLYGPPGTGKTLLARA 185
Query: 265 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNT 324
VAHHT C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 186 VAHHTACKFIRVSGSELVQKYIGEGSRMVRELFVMA------------------------ 221
Query: 325 IVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGSSR+E SGGDSEVQRTMLELLNQLDGFE TK
Sbjct: 222 -----REHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFEPTK 270
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 52/68 (76%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT C FIRVSGSELVQK+IGEGSRMVRELFVMAR S MD
Sbjct: 177 TGKTLLARAVAHHTACKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPS----IIFMD 232
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 233 EIDSIGSS 240
>gi|302793644|ref|XP_002978587.1| hypothetical protein SELMODRAFT_108927 [Selaginella moellendorffii]
gi|300153936|gb|EFJ20573.1| hypothetical protein SELMODRAFT_108927 [Selaginella moellendorffii]
Length = 352
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 189/250 (75%), Positives = 208/250 (83%), Gaps = 31/250 (12%)
Query: 130 EQGSYVGEVVKPMDKKKVLVKV-HPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKI 188
E GSYVGEVVK M K KVLVKV HPEGK+VVD+DK+ID++ +TP RVALRN+SY LH I
Sbjct: 12 EPGSYVGEVVKVMGKSKVLVKVLHPEGKYVVDVDKSIDMSKITPTTRVALRNDSYVLHLI 71
Query: 189 LPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGV 248
LP+KVDPLV+LM VEKVPDSTY+M+GGLD QIKEIKEVIELP+KHPELF++LGIAQPKGV
Sbjct: 72 LPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGV 131
Query: 249 LLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFA 308
LLYGPPGTGKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 132 LLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMA-------- 183
Query: 309 HHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSG-GDSEVQRTMLEL 367
REHAPSIIFMDEIDSIGSSR+ESG+G GDSEVQRTMLEL
Sbjct: 184 ---------------------REHAPSIIFMDEIDSIGSSRMESGNGNGDSEVQRTMLEL 222
Query: 368 LNQLDGFEAT 377
LNQLDGFEA+
Sbjct: 223 LNQLDGFEAS 232
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/68 (72%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMAR S MD
Sbjct: 139 TGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPS----IIFMD 194
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 195 EIDSIGSS 202
>gi|302826746|ref|XP_002994774.1| hypothetical protein SELMODRAFT_139105 [Selaginella moellendorffii]
gi|300136905|gb|EFJ04162.1| hypothetical protein SELMODRAFT_139105 [Selaginella moellendorffii]
Length = 352
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 189/250 (75%), Positives = 208/250 (83%), Gaps = 31/250 (12%)
Query: 130 EQGSYVGEVVKPMDKKKVLVKV-HPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKI 188
E GSYVGEVVK M K KVLVKV HPEGK+VVD+DK+ID++ +TP RVALRN+SY LH I
Sbjct: 12 EPGSYVGEVVKVMGKSKVLVKVLHPEGKYVVDVDKSIDMSKITPTTRVALRNDSYVLHLI 71
Query: 189 LPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGV 248
LP+KVDPLV+LM VEKVPDSTY+M+GGLD QIKEIKEVIELP+KHPELF++LGIAQPKGV
Sbjct: 72 LPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGV 131
Query: 249 LLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFA 308
LLYGPPGTGKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 132 LLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMA-------- 183
Query: 309 HHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSG-GDSEVQRTMLEL 367
REHAPSIIFMDEIDSIGSSR+ESG+G GDSEVQRTMLEL
Sbjct: 184 ---------------------REHAPSIIFMDEIDSIGSSRMESGNGNGDSEVQRTMLEL 222
Query: 368 LNQLDGFEAT 377
LNQLDGFEA+
Sbjct: 223 LNQLDGFEAS 232
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/68 (72%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMAR S MD
Sbjct: 139 TGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPS----IIFMD 194
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 195 EIDSIGSS 202
>gi|322704317|gb|EFY95913.1| 26S protease regulatory subunit 8 [Metarhizium anisopliae ARSEF 23]
Length = 389
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 204/294 (69%), Positives = 233/294 (79%), Gaps = 29/294 (9%)
Query: 85 YYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDK 144
YY KIE ++L + + + LRRL+AQRN+ N++VR+LREEL LLQ+ GSYVGEVVK M
Sbjct: 6 YYHNKIEAMKLEILKGQAALRRLEAQRNDYNSRVRLLREELGLLQQPGSYVGEVVKVMGT 65
Query: 145 KKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEK 204
KKVLVKVHPEGK+VVD+ ++D+ +TP RV L ++SY L K+LP+ VDPLVSLMMVEK
Sbjct: 66 KKVLVKVHPEGKYVVDVSDSVDVAKLTPGKRVTLLSDSYKLEKLLPSSVDPLVSLMMVEK 125
Query: 205 VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 264
VPDSTY+M+GGLD QIKEIKEVIEL +KHPELF++LGIAQPKGVLLYGPPGTGKTLLARA
Sbjct: 126 VPDSTYDMIGGLDQQIKEIKEVIELGLKHPELFESLGIAQPKGVLLYGPPGTGKTLLARA 185
Query: 265 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNT 324
VAHHT C FIRVSGSELVQK+IGEGSRMVRELF+MA
Sbjct: 186 VAHHTACKFIRVSGSELVQKYIGEGSRMVRELFIMA------------------------ 221
Query: 325 IVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGSSR+E SGGDSEVQRTMLELLNQLDGFE TK
Sbjct: 222 -----REHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFEPTK 270
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 51/98 (52%), Positives = 59/98 (60%), Gaps = 19/98 (19%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA--------------- 56
+GKTLLARAVAHHT C FIRVSGSELVQK+IGEGSRMVRELF+MA
Sbjct: 177 TGKTLLARAVAHHTACKFIRVSGSELVQKYIGEGSRMVRELFIMAREHAPSIIFMDEIDS 236
Query: 57 ----RCKGSSRGTEFFTMDVDEAIKSSEGFKPYYVTKI 90
R +GSS G + E + +GF+P KI
Sbjct: 237 IGSSRVEGSSGGDSEVQRTMLELLNQLDGFEPTKNIKI 274
>gi|367034500|ref|XP_003666532.1| hypothetical protein MYCTH_2084256 [Myceliophthora thermophila ATCC
42464]
gi|347013805|gb|AEO61287.1| hypothetical protein MYCTH_2084256 [Myceliophthora thermophila ATCC
42464]
Length = 389
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 206/294 (70%), Positives = 234/294 (79%), Gaps = 29/294 (9%)
Query: 85 YYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDK 144
YY KIE +QL + + + LRRL+AQRN+ N++VR+LREEL LLQ+ GSYVGEVVK M
Sbjct: 6 YYHNKIEAMQLEILKGQAVLRRLEAQRNDYNSRVRLLREELGLLQQPGSYVGEVVKVMST 65
Query: 145 KKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEK 204
KKVLVKVHPEGK+VVD+ ++D++ +T RV L ++SY L KILP+ VDPLVSLMMVEK
Sbjct: 66 KKVLVKVHPEGKYVVDVADSVDVSKLTVGKRVTLLSDSYKLEKILPSSVDPLVSLMMVEK 125
Query: 205 VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 264
VPDSTY+M+GGLD QIKEIKEVIEL +KHPELF++LGIAQPKGVLLYGPPGTGKTLLARA
Sbjct: 126 VPDSTYDMIGGLDQQIKEIKEVIELGLKHPELFESLGIAQPKGVLLYGPPGTGKTLLARA 185
Query: 265 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNT 324
VAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 186 VAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMA------------------------ 221
Query: 325 IVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGSSR+E SGGDSEVQRTMLELLNQLDGFE TK
Sbjct: 222 -----REHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFEPTK 270
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 53/68 (77%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMAR S MD
Sbjct: 177 TGKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPS----IIFMD 232
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 233 EIDSIGSS 240
>gi|322699346|gb|EFY91108.1| 26S protease regulatory subunit 8 [Metarhizium acridum CQMa 102]
Length = 389
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 204/294 (69%), Positives = 233/294 (79%), Gaps = 29/294 (9%)
Query: 85 YYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDK 144
YY KIE ++L + + + LRRL+AQRN+ N++VR+LREEL LLQ+ GSYVGEVVK M
Sbjct: 6 YYHNKIEAMKLEILKGQAALRRLEAQRNDYNSRVRLLREELGLLQQPGSYVGEVVKVMGT 65
Query: 145 KKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEK 204
KKVLVKVHPEGK+VVD+ ++D+ +TP RV L ++SY L K+LP+ VDPLVSLMMVEK
Sbjct: 66 KKVLVKVHPEGKYVVDVSDSVDVAKLTPGKRVTLLSDSYKLEKLLPSSVDPLVSLMMVEK 125
Query: 205 VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 264
VPDSTY+M+GGLD QIKEIKEVIEL +KHPELF++LGIAQPKGVLLYGPPGTGKTLLARA
Sbjct: 126 VPDSTYDMIGGLDQQIKEIKEVIELGLKHPELFESLGIAQPKGVLLYGPPGTGKTLLARA 185
Query: 265 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNT 324
VAHHT C FIRVSGSELVQK+IGEGSRMVRELF+MA
Sbjct: 186 VAHHTACKFIRVSGSELVQKYIGEGSRMVRELFIMA------------------------ 221
Query: 325 IVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGSSR+E SGGDSEVQRTMLELLNQLDGFE TK
Sbjct: 222 -----REHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFEPTK 270
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 51/98 (52%), Positives = 59/98 (60%), Gaps = 19/98 (19%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA--------------- 56
+GKTLLARAVAHHT C FIRVSGSELVQK+IGEGSRMVRELF+MA
Sbjct: 177 TGKTLLARAVAHHTACKFIRVSGSELVQKYIGEGSRMVRELFIMAREHAPSIIFMDEIDS 236
Query: 57 ----RCKGSSRGTEFFTMDVDEAIKSSEGFKPYYVTKI 90
R +GSS G + E + +GF+P KI
Sbjct: 237 IGSSRVEGSSGGDSEVQRTMLELLNQLDGFEPTKNIKI 274
>gi|71031638|ref|XP_765461.1| 26S proteasome regulatory subunit [Theileria parva strain Muguga]
gi|68352417|gb|EAN33178.1| 26S proteasome regulatory subunit, putative [Theileria parva]
Length = 393
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 199/295 (67%), Positives = 229/295 (77%), Gaps = 29/295 (9%)
Query: 81 GFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVK 140
G + YY IE+ Q ++++K RL+AQRNELN +VR L++EL L E GS+VGEVVK
Sbjct: 6 GLQSYYTHLIEDYQALLSQKLMTKSRLEAQRNELNLRVRELKDELHSLLESGSFVGEVVK 65
Query: 141 PMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLM 200
M K+LVK+ EGK+VVD+ +ID+N VTPN RVAL ++SY LHKILP KVDPLV+LM
Sbjct: 66 SMCNDKILVKISLEGKYVVDLASDIDVNLVTPNTRVALMSDSYKLHKILPTKVDPLVALM 125
Query: 201 MVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTL 260
VEKVPDSTY+MVGGL+ QIK++KEVIELP+KHPE+FD+LGI+QPKGVLLYGPPGTGKTL
Sbjct: 126 KVEKVPDSTYDMVGGLEEQIKQVKEVIELPIKHPEIFDSLGISQPKGVLLYGPPGTGKTL 185
Query: 261 LARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTI 320
LARAVAHHTECTFIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 186 LARAVAHHTECTFIRVSGSELVQKYIGEGSRMVRELFVMA-------------------- 225
Query: 321 LTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
R HAPSIIFMDEIDSIGSSR + SGGDSEVQRTMLELLNQLDGFE
Sbjct: 226 ---------RSHAPSIIFMDEIDSIGSSRGDGSSGGDSEVQRTMLELLNQLDGFE 271
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/51 (88%), Positives = 47/51 (92%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
+GKTLLARAVAHHTECTFIRVSGSELVQK+IGEGSRMVRELFVMAR S
Sbjct: 181 TGKTLLARAVAHHTECTFIRVSGSELVQKYIGEGSRMVRELFVMARSHAPS 231
>gi|407415171|gb|EKF36782.1| proteasome regulatory ATPase subunit 2, putative [Trypanosoma cruzi
marinkellei]
Length = 404
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 191/297 (64%), Positives = 227/297 (76%), Gaps = 32/297 (10%)
Query: 85 YYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDK 144
Y++ KI+EL+ N RL++QRNELN +VR L+EE+Q+LQE GS V +VV+ + K
Sbjct: 18 YFLQKIQELRAQEKRLLDNYLRLESQRNELNRRVRQLKEEVQMLQESGSTVADVVQVLGK 77
Query: 145 KKVLVKVHP-EGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVE 203
KVLV V +GK +VD++K ID+ ++T N RVALRN +Y +H ILP KVDPLVSLM VE
Sbjct: 78 NKVLVNVSSNQGKLIVDVEKTIDVAELTRNTRVALRNATYAIHYILPTKVDPLVSLMKVE 137
Query: 204 KV-PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 262
K DSTY+ +GGL Q+KEIKEVIELPVKHPELF+ALGIAQPKGVLLYGPPGTGKTLLA
Sbjct: 138 KAGSDSTYDEIGGLSRQVKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLA 197
Query: 263 RAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILT 322
RAVAHHT+CTFIRVSG+ELVQK+IGEG+R+VRELFVMA
Sbjct: 198 RAVAHHTDCTFIRVSGAELVQKYIGEGARLVRELFVMA---------------------- 235
Query: 323 NTIVCNFREHAPSIIFMDEIDSIGSSRIE-SGSGGDSEVQRTMLELLNQLDGFEATK 378
REH+PSIIFMDEIDSIGSSR+E +G GGDSEVQRTMLELLNQLDGFE+T+
Sbjct: 236 -------REHSPSIIFMDEIDSIGSSRLENTGRGGDSEVQRTMLELLNQLDGFESTQ 285
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/68 (67%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+CTFIRVSG+ELVQK+IGEG+R+VRELFVMAR S MD
Sbjct: 191 TGKTLLARAVAHHTDCTFIRVSGAELVQKYIGEGARLVRELFVMAREHSPS----IIFMD 246
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 247 EIDSIGSS 254
>gi|407849457|gb|EKG04192.1| proteasome regulatory ATPase subunit 2, putative [Trypanosoma
cruzi]
Length = 404
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 191/297 (64%), Positives = 227/297 (76%), Gaps = 32/297 (10%)
Query: 85 YYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDK 144
Y++ KI+EL+ N RL++QRNELN +VR L+EE+Q+LQE GS V +VV+ + K
Sbjct: 18 YFLQKIQELRAQEKRLLDNYLRLESQRNELNRRVRQLKEEVQMLQESGSTVADVVQVLGK 77
Query: 145 KKVLVKVHP-EGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVE 203
KVLV V +GK +VD++K ID+ ++T N RVALRN +Y +H ILP KVDPLVSLM VE
Sbjct: 78 NKVLVNVSSNQGKLIVDVEKTIDVAELTRNTRVALRNATYAIHYILPTKVDPLVSLMKVE 137
Query: 204 KV-PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 262
K DSTY+ +GGL Q+KEIKEVIELPVKHPELF+ALGIAQPKGVLLYGPPGTGKTLLA
Sbjct: 138 KAGSDSTYDEIGGLSRQVKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLA 197
Query: 263 RAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILT 322
RAVAHHT+CTFIRVSG+ELVQK+IGEG+R+VRELFVMA
Sbjct: 198 RAVAHHTDCTFIRVSGAELVQKYIGEGARLVRELFVMA---------------------- 235
Query: 323 NTIVCNFREHAPSIIFMDEIDSIGSSRIE-SGSGGDSEVQRTMLELLNQLDGFEATK 378
REH+PSIIFMDEIDSIGSSR+E +G GGDSEVQRTMLELLNQLDGFE+T+
Sbjct: 236 -------REHSPSIIFMDEIDSIGSSRLENTGRGGDSEVQRTMLELLNQLDGFESTQ 285
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/68 (67%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+CTFIRVSG+ELVQK+IGEG+R+VRELFVMAR S MD
Sbjct: 191 TGKTLLARAVAHHTDCTFIRVSGAELVQKYIGEGARLVRELFVMAREHSPS----IIFMD 246
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 247 EIDSIGSS 254
>gi|71665751|ref|XP_819842.1| proteasome regulatory ATPase subunit [Trypanosoma cruzi strain CL
Brener]
gi|70885161|gb|EAN97991.1| proteasome regulatory ATPase subunit, putative [Trypanosoma cruzi]
Length = 404
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 191/297 (64%), Positives = 227/297 (76%), Gaps = 32/297 (10%)
Query: 85 YYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDK 144
Y++ KI+EL+ N RL++QRNELN +VR L+EE+Q+LQE GS V +VV+ + K
Sbjct: 18 YFLQKIQELRAQEKRLLDNYLRLESQRNELNRRVRQLKEEVQMLQESGSTVADVVQVLGK 77
Query: 145 KKVLVKVHP-EGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVE 203
KVLV V +GK +VD++K ID+ ++T N RVALRN +Y +H ILP KVDPLVSLM VE
Sbjct: 78 NKVLVNVSSNQGKLIVDVEKTIDVAELTRNTRVALRNATYAIHYILPTKVDPLVSLMKVE 137
Query: 204 KV-PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 262
K DSTY+ +GGL Q+KEIKEVIELPVKHPELF+ALGIAQPKGVLLYGPPGTGKTLLA
Sbjct: 138 KAGSDSTYDEIGGLSRQVKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLA 197
Query: 263 RAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILT 322
RAVAHHT+CTFIRVSG+ELVQK+IGEG+R+VRELFVMA
Sbjct: 198 RAVAHHTDCTFIRVSGAELVQKYIGEGARLVRELFVMA---------------------- 235
Query: 323 NTIVCNFREHAPSIIFMDEIDSIGSSRIE-SGSGGDSEVQRTMLELLNQLDGFEATK 378
REH+PSIIFMDEIDSIGSSR+E +G GGDSEVQRTMLELLNQLDGFE+T+
Sbjct: 236 -------REHSPSIIFMDEIDSIGSSRLENTGRGGDSEVQRTMLELLNQLDGFESTQ 285
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/68 (67%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+CTFIRVSG+ELVQK+IGEG+R+VRELFVMAR S MD
Sbjct: 191 TGKTLLARAVAHHTDCTFIRVSGAELVQKYIGEGARLVRELFVMAREHSPS----IIFMD 246
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 247 EIDSIGSS 254
>gi|323450278|gb|EGB06160.1| hypothetical protein AURANDRAFT_72053 [Aureococcus anophagefferens]
Length = 1445
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 206/309 (66%), Positives = 231/309 (74%), Gaps = 42/309 (13%)
Query: 70 MDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQ 129
M+VD +S+G YY TKI L+ EK NL+RL AQRNELN ++
Sbjct: 1060 MEVDGG-STSKGMTSYYATKIGGLERETREKTLNLQRLTAQRNELN------------MR 1106
Query: 130 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKIL 189
E GSYVGEVVK M + K+LVKV+PEGK+VVD+ K ID+ TPN RVALRN+SY LHKIL
Sbjct: 1107 EPGSYVGEVVKAMSQTKILVKVNPEGKYVVDLGKGIDVGKCTPNTRVALRNDSYELHKIL 1166
Query: 190 PNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVL 249
P KVDPLVSLM VEKVPDSTY+MVGGL+ QI+EIKEVIELP+KHPELFDALG+AQPKGVL
Sbjct: 1167 PTKVDPLVSLMKVEKVPDSTYDMVGGLEKQIREIKEVIELPIKHPELFDALGVAQPKGVL 1226
Query: 250 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAH 309
LYGPPGTGKTLLARAVAHHT+CTF+RVSG+ELVQK+IGEGSRMVRELFVMA
Sbjct: 1227 LYGPPGTGKTLLARAVAHHTDCTFVRVSGAELVQKYIGEGSRMVRELFVMA--------- 1277
Query: 310 HPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN 369
RE APSIIFMDE+DSIGSSR E G GGDSEV RTMLELLN
Sbjct: 1278 --------------------REAAPSIIFMDEVDSIGSSRGEGGEGGDSEVGRTMLELLN 1317
Query: 370 QLDGFEATK 378
QLDGFE T+
Sbjct: 1318 QLDGFEPTQ 1326
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 41/46 (89%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+CTF+RVSG+ELVQK+IGEGSRMVRELFVMAR
Sbjct: 1233 TGKTLLARAVAHHTDCTFVRVSGAELVQKYIGEGSRMVRELFVMAR 1278
>gi|397594574|gb|EJK56278.1| hypothetical protein THAOC_23874 [Thalassiosira oceanica]
Length = 397
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 205/301 (68%), Positives = 235/301 (78%), Gaps = 30/301 (9%)
Query: 79 SEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEV 138
++G YY +KI +L + E+ +L+RL+AQRNELNAKVRMLREEL LQE GSYVGEV
Sbjct: 7 AQGVDKYYSSKIGDLSSTIEERTSDLQRLKAQRNELNAKVRMLREELYHLQEPGSYVGEV 66
Query: 139 VKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVS 198
+K M +KKVLVK++PEGK+VVDIDK+IDIND+ PN RVALRN+SYTLHKILP KVDPLVS
Sbjct: 67 IKQMGQKKVLVKINPEGKYVVDIDKDIDINDLKPNTRVALRNDSYTLHKILPTKVDPLVS 126
Query: 199 LMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGK 258
LM VE VPDSTY+M+GGL+ Q+ EIKEVIELP+KHPELF++LG+AQPKGVLLYGPPGTGK
Sbjct: 127 LMKVEAVPDSTYDMIGGLEKQVMEIKEVIELPIKHPELFESLGVAQPKGVLLYGPPGTGK 186
Query: 259 TLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLL 318
TLLARAVAHHT+CTFIRVSG+ELVQK+IGEGSRMVRELFVMA
Sbjct: 187 TLLARAVAHHTDCTFIRVSGAELVQKYIGEGSRMVRELFVMA------------------ 228
Query: 319 TILTNTIVCNFREHAPSIIFMDEID-SIGSSRIESGSGGDSEVQRTMLELLNQLDGFEAT 377
RE +PSIIFMDEID S GGDSEVQRTMLELLNQLDGFE
Sbjct: 229 -----------REASPSIIFMDEIDSIGQSRGGGGSGGGDSEVQRTMLELLNQLDGFEPA 277
Query: 378 K 378
+
Sbjct: 278 Q 278
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/46 (91%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+CTFIRVSG+ELVQK+IGEGSRMVRELFVMAR
Sbjct: 184 TGKTLLARAVAHHTDCTFIRVSGAELVQKYIGEGSRMVRELFVMAR 229
>gi|443895610|dbj|GAC72956.1| 26S proteasome regulatory complex, ATPase RPT6 [Pseudozyma
antarctica T-34]
Length = 424
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 220/305 (72%), Positives = 243/305 (79%), Gaps = 30/305 (9%)
Query: 75 AIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSY 134
A S+ G + +Y +KI ++++ +K QNLRRL+AQRN LNA+VR+LREELQLLQE GSY
Sbjct: 30 ASASALGIQSFYQSKIRSYEILINQKTQNLRRLEAQRNALNARVRLLREELQLLQEPGSY 89
Query: 135 VGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVD 194
VGEVVK M KKKVLVKV PEGK+VVDI +IDI+ +TP RVALR++SYTLHK+LPNK+D
Sbjct: 90 VGEVVKVMGKKKVLVKVQPEGKYVVDIASDIDISTLTPTLRVALRSDSYTLHKVLPNKID 149
Query: 195 PLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPP 254
PLVSLMMVEKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELF+ALGIAQPKGVLLYGPP
Sbjct: 150 PLVSLMMVEKVPDSTYEMVGGLDRQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPP 209
Query: 255 GTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLF 314
GTGKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 210 GTGKTLLARAVAHHTDCRFIRVSGSELVQKYIGEGSRMVRELFVMA-------------- 255
Query: 315 WSLLTILTNTIVCNFREHAPSIIFMDEIDSI-GSSRIESGSGGDSEVQRTMLELLNQLDG 373
REHAPSIIFMDEIDSI S GGDSEVQRTMLELLNQLDG
Sbjct: 256 ---------------REHAPSIIFMDEIDSIGSSRGDGGSRGGDSEVQRTMLELLNQLDG 300
Query: 374 FEATK 378
FE TK
Sbjct: 301 FEGTK 305
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 42/46 (91%), Positives = 45/46 (97%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMAR
Sbjct: 211 TGKTLLARAVAHHTDCRFIRVSGSELVQKYIGEGSRMVRELFVMAR 256
>gi|340057565|emb|CCC51911.1| putative 19S proteasome regulatory subunit [Trypanosoma vivax Y486]
Length = 406
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 190/297 (63%), Positives = 227/297 (76%), Gaps = 32/297 (10%)
Query: 85 YYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDK 144
Y++ KI+EL+ + N RL+AQRNELN +VR L+EE+Q+LQE GS V +VV+ M +
Sbjct: 20 YFLQKIQELRAQEKRLQDNYLRLEAQRNELNRRVRHLKEEVQMLQESGSVVADVVQVMSR 79
Query: 145 KKVLVKVHP-EGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVE 203
KVLV + +GK VVD++K +D D++ N RVALRN SY +H ILP KVDPL+SLM VE
Sbjct: 80 GKVLVNMSSNQGKLVVDVEKTVDTADLSRNVRVALRNGSYAIHYILPTKVDPLISLMKVE 139
Query: 204 KV-PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 262
K +STY+ +GGL Q+KEIKEVIELPVKHPELF+ALGIAQPKGVLLYGPPGTGKTLLA
Sbjct: 140 KAGSESTYDEIGGLSRQVKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLA 199
Query: 263 RAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILT 322
RAVAHHT+CTFIRVSG+ELVQK+IGEG+R+VRELFVMA
Sbjct: 200 RAVAHHTDCTFIRVSGAELVQKYIGEGARLVRELFVMA---------------------- 237
Query: 323 NTIVCNFREHAPSIIFMDEIDSIGSSRIE-SGSGGDSEVQRTMLELLNQLDGFEATK 378
REH+PSIIFMDEIDSIGSSR++ +G GGDSEVQRTMLELLNQLDGFEAT+
Sbjct: 238 -------REHSPSIIFMDEIDSIGSSRLDNTGRGGDSEVQRTMLELLNQLDGFEATQ 287
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 46/68 (67%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+CTFIRVSG+ELVQK+IGEG+R+VRELFVMAR S MD
Sbjct: 193 TGKTLLARAVAHHTDCTFIRVSGAELVQKYIGEGARLVRELFVMAREHSPS----IIFMD 248
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 249 EIDSIGSS 256
>gi|342184603|emb|CCC94085.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 400
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 192/297 (64%), Positives = 229/297 (77%), Gaps = 32/297 (10%)
Query: 85 YYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDK 144
Y++ KI+EL+ + N RL+AQR+ELN +VR L+EE+QLLQE GS V +VV+ M K
Sbjct: 14 YFLLKIQELRAQEKRLQDNYLRLEAQRSELNRRVRHLKEEVQLLQESGSTVADVVRVMSK 73
Query: 145 KKVLVKVHP-EGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVE 203
KVLV V +GK VVD++KNIDI D++ N RVALR+ ++ +H ILP KVDPLVSLM VE
Sbjct: 74 GKVLVNVSSSQGKLVVDVEKNIDIADLSRNVRVALRSGTFAIHYILPTKVDPLVSLMKVE 133
Query: 204 KV-PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 262
V +STY+ +GGL Q+KEIKEVIELPVKHPELF+ALGIAQPKGVLLYGPPGTGKTLLA
Sbjct: 134 NVGSESTYDEIGGLSRQVKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLA 193
Query: 263 RAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILT 322
RAVAHHT+CTFIRVSG+ELVQK+IGEG+R+VRELFVMA
Sbjct: 194 RAVAHHTDCTFIRVSGAELVQKYIGEGARLVRELFVMA---------------------- 231
Query: 323 NTIVCNFREHAPSIIFMDEIDSIGSSRIE-SGSGGDSEVQRTMLELLNQLDGFEATK 378
REH+PSIIFMDEIDSIGS+R+E +G GGDSEVQRTMLELLNQLDGFE+T+
Sbjct: 232 -------REHSPSIIFMDEIDSIGSTRLENTGRGGDSEVQRTMLELLNQLDGFESTQ 281
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/46 (86%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+CTFIRVSG+ELVQK+IGEG+R+VRELFVMAR
Sbjct: 187 TGKTLLARAVAHHTDCTFIRVSGAELVQKYIGEGARLVRELFVMAR 232
>gi|355714055|gb|AES04877.1| proteasome 26S subunit, ATPase, 5 [Mustela putorius furo]
Length = 228
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 193/218 (88%), Positives = 208/218 (95%), Gaps = 1/218 (0%)
Query: 70 MDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQ 129
M+++E K+ G + YY++KIEELQLIV +K QNLRRLQAQRNELNAKVR+LREELQLLQ
Sbjct: 12 MELEEG-KAGSGLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQ 70
Query: 130 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKIL 189
EQGSYVGEVV+ MDKKKVLVKVHPEGKFVVD+DKNIDINDVTPNCRVALRN+SYTLHKIL
Sbjct: 71 EQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKIL 130
Query: 190 PNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVL 249
PNKVDPLVSLMMVEKVPDSTYEM+GGLD QIKEIKEVIELPVKHPELF+ALGIAQPKGVL
Sbjct: 131 PNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVL 190
Query: 250 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIG 287
LYGPPGTGKTLLARAVAHHT+CTFIRVSGSELVQKFIG
Sbjct: 191 LYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIG 228
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/32 (93%), Positives = 32/32 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIG 43
+GKTLLARAVAHHT+CTFIRVSGSELVQKFIG
Sbjct: 197 TGKTLLARAVAHHTDCTFIRVSGSELVQKFIG 228
>gi|1079323|pir||S52928 XSUG1 protein - African clawed frog
Length = 283
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 205/300 (68%), Positives = 231/300 (77%), Gaps = 33/300 (11%)
Query: 70 MDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQ 129
M++DE+ + G + YY++KIE+LQL+V +K QNLRRLQAQRNELNAKVR+LREELQLLQ
Sbjct: 4 MEMDES-RGGTGLRQYYLSKIEDLQLVVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQ 62
Query: 130 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKIL 189
EQG + +++ + + P GKFVVD+DKNIDINDVTPNCRVALRN+SYTLHKIL
Sbjct: 63 EQGILRRRSGQSYGQEESVGQGSPGGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKIL 122
Query: 190 PNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVL 249
PNKVDPLVSLMMVEKVPDSTYEM+GGLD QIKEIKEVIELPVKHPE F+ALGIAQPKGVL
Sbjct: 123 PNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPEHFEALGIAQPKGVL 182
Query: 250 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAH 309
LYGPPGTGKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMA
Sbjct: 183 LYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMA--------- 233
Query: 310 HPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN 369
REHAPSIIFMDEIDSIGS G E R+ + L+
Sbjct: 234 --------------------REHAPSIIFMDEIDSIGS---RGSRGAREETARSSAQCLS 270
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/46 (93%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMAR
Sbjct: 189 TGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAR 234
>gi|308801421|ref|XP_003078024.1| 26S proteasome regulatory complex, ATPase RPT4 (ISS) [Ostreococcus
tauri]
gi|116056475|emb|CAL52764.1| 26S proteasome regulatory complex, ATPase RPT4 (ISS) [Ostreococcus
tauri]
Length = 442
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 212/354 (59%), Positives = 245/354 (69%), Gaps = 74/354 (20%)
Query: 65 TEFFTMDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAK------- 117
T+ T D A +G + YY KIE+L++ + +K NLRRL+AQRN LN +
Sbjct: 2 TDVLTSDAPRA----QGLRAYYDAKIEQLEVALRDKTMNLRRLEAQRNALNGRGASWARD 57
Query: 118 ----VRM----------------------------LREELQLLQEQGSYVGEVVKPMDKK 145
VR LREEL +LQE GSYVGEVVK M KK
Sbjct: 58 DAYIVRATSFVGRARAMGEREGEFLGDRAERRLTSLREELHMLQEPGSYVGEVVKVMGKK 117
Query: 146 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
KVLVKVHPEGK+V D+DK+ID+ +TP RVALRN+SYTLH ILP+ +DPLVSLM VEKV
Sbjct: 118 KVLVKVHPEGKYVCDMDKSIDVTKLTPGTRVALRNDSYTLHVILPSNIDPLVSLMKVEKV 177
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
PDST++M+GGLD Q+KEIKEV+ELP+KHPELFD+LGIAQPKGV+LYGPPGTGKTLLARAV
Sbjct: 178 PDSTFDMIGGLDQQVKEIKEVVELPIKHPELFDSLGIAQPKGVILYGPPGTGKTLLARAV 237
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTI 325
AHHT+C FIRVSGSELVQK+IGEG+RMVRELFVMA
Sbjct: 238 AHHTDCCFIRVSGSELVQKYIGEGARMVRELFVMA------------------------- 272
Query: 326 VCNFREHAPSIIFMDEIDSIGSSR--IESGSGGDSEVQRTMLELLNQLDGFEAT 377
REHAPSI+FMDE+DSIGS+R G GGDSEVQRTMLELLNQLDGFEAT
Sbjct: 273 ----REHAPSILFMDEVDSIGSARDSGGGGGGGDSEVQRTMLELLNQLDGFEAT 322
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/46 (89%), Positives = 45/46 (97%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEG+RMVRELFVMAR
Sbjct: 228 TGKTLLARAVAHHTDCCFIRVSGSELVQKYIGEGARMVRELFVMAR 273
>gi|84994200|ref|XP_951822.1| 26S proteasome ATPase subunit (Rpt6A homologue) [Theileria annulata
strain Ankara]
gi|65301983|emb|CAI74090.1| 26S proteasome ATPase subunit (Rpt6A homologue), putative
[Theileria annulata]
Length = 393
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 198/295 (67%), Positives = 229/295 (77%), Gaps = 29/295 (9%)
Query: 81 GFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVK 140
G + YY IE+ Q ++++K RL+AQRNELN +VR L++EL L E GS+VGEVVK
Sbjct: 6 GLQSYYTHLIEDYQALLSQKLMTKSRLEAQRNELNLRVRELKDELHSLLESGSFVGEVVK 65
Query: 141 PMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLM 200
M K+LVK+ EGK+VVD+ +ID++ VTPN RVAL ++SY LHKILP KVDPLV+LM
Sbjct: 66 SMCNDKILVKISLEGKYVVDLASDIDVSLVTPNTRVALMSDSYKLHKILPTKVDPLVALM 125
Query: 201 MVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTL 260
VEKVPDSTY+MVGGL+ QIK++KEVIELP+KHPE+FD+LGI+QPKGVLLYGPPGTGKTL
Sbjct: 126 KVEKVPDSTYDMVGGLEEQIKQVKEVIELPIKHPEIFDSLGISQPKGVLLYGPPGTGKTL 185
Query: 261 LARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTI 320
LARAVAHHTECTFIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 186 LARAVAHHTECTFIRVSGSELVQKYIGEGSRMVRELFVMA-------------------- 225
Query: 321 LTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
R HAPSIIFMDEIDSIGSSR + SGGDSEVQRTMLELLNQLDGFE
Sbjct: 226 ---------RSHAPSIIFMDEIDSIGSSRGDGSSGGDSEVQRTMLELLNQLDGFE 271
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/51 (88%), Positives = 47/51 (92%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
+GKTLLARAVAHHTECTFIRVSGSELVQK+IGEGSRMVRELFVMAR S
Sbjct: 181 TGKTLLARAVAHHTECTFIRVSGSELVQKYIGEGSRMVRELFVMARSHAPS 231
>gi|443919966|gb|ELU39987.1| 26S proteasome regulatory complex, ATPase RPT6 [Rhizoctonia solani
AG-1 IA]
Length = 434
Score = 367 bits (943), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 211/311 (67%), Positives = 232/311 (74%), Gaps = 36/311 (11%)
Query: 75 AIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSY 134
A ++ G K YY KIE + ++ K QNLRRL+AQRN+LNA+VR+LREELQLL E GSY
Sbjct: 7 ASRAGGGVKSYYQAKIEAAEHLINVKTQNLRRLEAQRNKLNARVRLLREELQLLSEPGSY 66
Query: 135 VGEVVKPMDKKKVLVKVHPEGKFV------VDIDKNIDINDVTPNCRVALRNESYTLHKI 188
VGEVVK M K KVLVKV PEGK+ + + IDI +TP RVALR++SY +HKI
Sbjct: 67 VGEVVKVMGKDKVLVKVQPEGKYSKQSTEKLHCMREIDIGAITPTLRVALRSDSYQIHKI 126
Query: 189 LPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGV 248
LPNKVDPLVSLMMVEKVPDSTY+MVGGLD QIKEIKEVIELPVKHPELF++LGIAQPKGV
Sbjct: 127 LPNKVDPLVSLMMVEKVPDSTYDMVGGLDKQIKEIKEVIELPVKHPELFESLGIAQPKGV 186
Query: 249 LLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFA 308
LLYGPPGTGKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 187 LLYGPPGTGKTLLARAVAHHTDCRFIRVSGSELVQKYIGEGSRMVRELFVMA-------- 238
Query: 309 HHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEID-SIGSSRIESGSGGDSEVQRTMLEL 367
REHAPSIIFMDEID S GDSEVQRTMLEL
Sbjct: 239 ---------------------REHAPSIIFMDEIDSIGSSRGEGGSGSGDSEVQRTMLEL 277
Query: 368 LNQLDGFEATK 378
LNQLDGFE TK
Sbjct: 278 LNQLDGFEPTK 288
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 42/46 (91%), Positives = 45/46 (97%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMAR
Sbjct: 194 TGKTLLARAVAHHTDCRFIRVSGSELVQKYIGEGSRMVRELFVMAR 239
>gi|9651743|gb|AAF91248.1|AF227504_1 proteasome regulatory ATPase subunit 6 [Trypanosoma brucei]
Length = 408
Score = 366 bits (939), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 188/297 (63%), Positives = 227/297 (76%), Gaps = 32/297 (10%)
Query: 85 YYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDK 144
Y++ KI+EL+ + N RL+AQRNELN +VR L+EE+QLLQE GS V +VV+ M K
Sbjct: 22 YFLQKIQELRAQEKRLQDNYMRLEAQRNELNRRVRHLKEEVQLLQESGSIVADVVRVMSK 81
Query: 145 KKVLVKVHP-EGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVE 203
KVLV V +GK VVD++K ++I+D++ N RVALR+ ++ +H ILP KVDPLVSLM VE
Sbjct: 82 GKVLVNVSSSQGKLVVDVEKTVNIDDLSRNVRVALRSGTFAIHYILPTKVDPLVSLMKVE 141
Query: 204 KV-PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 262
+STY+ +GGL Q+KEIKEVIEL VKHPELF+ALGIAQPKGVLLYGPPGTGKTLLA
Sbjct: 142 NAGSESTYDEIGGLSRQVKEIKEVIELSVKHPELFEALGIAQPKGVLLYGPPGTGKTLLA 201
Query: 263 RAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILT 322
RAVAHHT+CTFIRVSG+ELVQK+IGEG+R+VRELFVMA
Sbjct: 202 RAVAHHTDCTFIRVSGAELVQKYIGEGARLVRELFVMA---------------------- 239
Query: 323 NTIVCNFREHAPSIIFMDEIDSIGSSRIE-SGSGGDSEVQRTMLELLNQLDGFEATK 378
REH+PSIIFMDEIDSIGS+R+E +G GGDSEVQRTMLELLNQLDGFE+T+
Sbjct: 240 -------REHSPSIIFMDEIDSIGSTRLENTGRGGDSEVQRTMLELLNQLDGFESTQ 289
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/46 (86%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+CTFIRVSG+ELVQK+IGEG+R+VRELFVMAR
Sbjct: 195 TGKTLLARAVAHHTDCTFIRVSGAELVQKYIGEGARLVRELFVMAR 240
>gi|388851353|emb|CCF54938.1| probable RPT6-26S proteasome regulatory subunit [Ustilago hordei]
Length = 424
Score = 365 bits (937), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 218/322 (67%), Positives = 245/322 (76%), Gaps = 30/322 (9%)
Query: 58 CKGSSRGTEFFTMDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAK 117
G S T + A ++ G + +Y +KI ++++ +K QNLRRL+AQRN LNA+
Sbjct: 13 ATGHSSSTNLANIGGAAASANALGIQSFYQSKIRSYEILINQKTQNLRRLEAQRNALNAR 72
Query: 118 VRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVA 177
VR+LREELQLLQE GSYVGEVVK M KKKVLVKV PEGK+VVDI +ID++ +TP RVA
Sbjct: 73 VRLLREELQLLQEPGSYVGEVVKVMGKKKVLVKVQPEGKYVVDIASDIDVSTLTPTLRVA 132
Query: 178 LRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELF 237
LR++SYTLHK+LPNK+DPLVSLMMVEKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELF
Sbjct: 133 LRSDSYTLHKVLPNKIDPLVSLMMVEKVPDSTYEMVGGLDRQIKEIKEVIELPVKHPELF 192
Query: 238 DALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 297
++LGIAQPKGVLLYGPPGTGKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELF
Sbjct: 193 ESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCRFIRVSGSELVQKYIGEGSRMVRELF 252
Query: 298 VMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEID-SIGSSRIESGSGG 356
VMA REHAPSIIFMDEID S GG
Sbjct: 253 VMA-----------------------------REHAPSIIFMDEIDSIGSSRGESGSGGG 283
Query: 357 DSEVQRTMLELLNQLDGFEATK 378
DSEVQRTMLELLNQLDGFE TK
Sbjct: 284 DSEVQRTMLELLNQLDGFEGTK 305
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/46 (91%), Positives = 45/46 (97%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMAR
Sbjct: 211 TGKTLLARAVAHHTDCRFIRVSGSELVQKYIGEGSRMVRELFVMAR 256
>gi|71748282|ref|XP_823196.1| proteasome regulatory ATPase subunit 6 [Trypanosoma brucei TREU927]
gi|70832864|gb|EAN78368.1| proteasome regulatory ATPase subunit 6 [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
gi|261333101|emb|CBH16096.1| 19S proteasome regulatory subunit [Trypanosoma brucei gambiense
DAL972]
Length = 408
Score = 365 bits (937), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 188/297 (63%), Positives = 227/297 (76%), Gaps = 32/297 (10%)
Query: 85 YYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDK 144
Y++ KI+EL+ + N RL+AQRNELN +VR L+EE+QLLQE GS V +VV+ M K
Sbjct: 22 YFLQKIQELRAQEKRLQDNYMRLEAQRNELNRRVRHLKEEVQLLQESGSIVADVVRVMSK 81
Query: 145 KKVLVKVHP-EGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVE 203
KVLV V +GK VVD++K ++I+D++ N RVALR+ ++ +H ILP KVDPLVSLM VE
Sbjct: 82 GKVLVNVSSSQGKLVVDVEKTVNIDDLSRNVRVALRSGTFAIHYILPTKVDPLVSLMKVE 141
Query: 204 KV-PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 262
+STY+ +GGL Q+KEIKEVIEL VKHPELF+ALGIAQPKGVLLYGPPGTGKTLLA
Sbjct: 142 NAGSESTYDEIGGLSRQVKEIKEVIELSVKHPELFEALGIAQPKGVLLYGPPGTGKTLLA 201
Query: 263 RAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILT 322
RAVAHHT+CTFIRVSG+ELVQK+IGEG+R+VRELFVMA
Sbjct: 202 RAVAHHTDCTFIRVSGAELVQKYIGEGARLVRELFVMA---------------------- 239
Query: 323 NTIVCNFREHAPSIIFMDEIDSIGSSRIE-SGSGGDSEVQRTMLELLNQLDGFEATK 378
REH+PSIIFMDEIDSIGS+R+E +G GGDSEVQRTMLELLNQLDGFE+T+
Sbjct: 240 -------REHSPSIIFMDEIDSIGSTRLENTGRGGDSEVQRTMLELLNQLDGFESTQ 289
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/46 (86%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+CTFIRVSG+ELVQK+IGEG+R+VRELFVMAR
Sbjct: 195 TGKTLLARAVAHHTDCTFIRVSGAELVQKYIGEGARLVRELFVMAR 240
>gi|384497989|gb|EIE88480.1| 26S protease regulatory subunit 8 [Rhizopus delemar RA 99-880]
Length = 367
Score = 365 bits (937), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 195/247 (78%), Positives = 206/247 (83%), Gaps = 29/247 (11%)
Query: 132 GSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPN 191
GSYVGEVVK M KKKVLVKVHPEGKFVVDI +IDI +TP RVALRN+SY LHK+LPN
Sbjct: 31 GSYVGEVVKVMGKKKVLVKVHPEGKFVVDIASDIDIAQLTPTTRVALRNDSYQLHKVLPN 90
Query: 192 KVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLY 251
K+DPLVSLMMVEKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELF++LGIAQPKGVLLY
Sbjct: 91 KIDPLVSLMMVEKVPDSTYEMVGGLDQQIKEIKEVIELPVKHPELFESLGIAQPKGVLLY 150
Query: 252 GPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHP 311
GPPGTGKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 151 GPPGTGKTLLARAVAHHTDCRFIRVSGSELVQKYIGEGSRMVRELFVMA----------- 199
Query: 312 LLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQL 371
REHAPSIIFMDEIDSIGS+R+ESG GGDSEVQRTMLELLNQL
Sbjct: 200 ------------------REHAPSIIFMDEIDSIGSARMESGGGGDSEVQRTMLELLNQL 241
Query: 372 DGFEATK 378
DGFEATK
Sbjct: 242 DGFEATK 248
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/46 (91%), Positives = 45/46 (97%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMAR
Sbjct: 155 TGKTLLARAVAHHTDCRFIRVSGSELVQKYIGEGSRMVRELFVMAR 200
>gi|358056745|dbj|GAA97408.1| hypothetical protein E5Q_04086 [Mixia osmundae IAM 14324]
Length = 406
Score = 365 bits (936), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 222/306 (72%), Positives = 239/306 (78%), Gaps = 32/306 (10%)
Query: 74 EAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGS 133
EA SS G YY KIE L L V +K QNLRRL+AQRN LNA+VR+LREELQLLQE GS
Sbjct: 13 EASDSSLGT--YYRAKIESLSLTVNQKAQNLRRLEAQRNALNARVRLLREELQLLQEPGS 70
Query: 134 YVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKV 193
YVGEVVK M KKKVLVKV PEGK+VVD NID+N++ PN RVALR++SY LH+ILPNK
Sbjct: 71 YVGEVVKVMGKKKVLVKVQPEGKYVVDFAPNIDLNELKPNLRVALRSDSYQLHQILPNKT 130
Query: 194 DPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGP 253
DPLV+LMMVEKVPDSTYEMVGGLD QIKE+KEVIELP+KHPELFD+LGIAQPKGVLLYGP
Sbjct: 131 DPLVALMMVEKVPDSTYEMVGGLDKQIKEVKEVIELPIKHPELFDSLGIAQPKGVLLYGP 190
Query: 254 PGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLL 313
PGTGKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 191 PGTGKTLLARAVAHHTDCRFIRVSGSELVQKYIGEGSRMVRELFVMA------------- 237
Query: 314 FWSLLTILTNTIVCNFREHAPSIIFMDEID-SIGSSRIESGSGGDSEVQRTMLELLNQLD 372
REHAPSIIFMDEID S SG DSEVQRTMLELLNQLD
Sbjct: 238 ----------------REHAPSIIFMDEIDSIGSSRGEGGSSGSDSEVQRTMLELLNQLD 281
Query: 373 GFEATK 378
GFEATK
Sbjct: 282 GFEATK 287
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 42/46 (91%), Positives = 45/46 (97%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMAR
Sbjct: 193 TGKTLLARAVAHHTDCRFIRVSGSELVQKYIGEGSRMVRELFVMAR 238
>gi|336263826|ref|XP_003346692.1| hypothetical protein SMAC_04125 [Sordaria macrospora k-hell]
gi|380091399|emb|CCC10895.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 376
Score = 365 bits (936), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 200/294 (68%), Positives = 223/294 (75%), Gaps = 42/294 (14%)
Query: 85 YYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDK 144
YY KIE ++L + + + LRRL+AQRN+ N++VR+LREEL LLQ+ GSYVGEVVK M
Sbjct: 6 YYHNKIEAMKLEILKGQAVLRRLEAQRNDYNSRVRLLREELGLLQQPGSYVGEVVKVMST 65
Query: 145 KKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEK 204
KKVLVKVHPEGK V RV L ++SY L K+LP+ VDPLVSLMMVEK
Sbjct: 66 KKVLVKVHPEGKLTV-------------GKRVTLLSDSYKLEKMLPSSVDPLVSLMMVEK 112
Query: 205 VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 264
VPDSTY+M+GGLD QIKEIKEVIEL +KHPELF++LGIAQPKGVLLYGPPGTGKTLLARA
Sbjct: 113 VPDSTYDMIGGLDQQIKEIKEVIELGLKHPELFESLGIAQPKGVLLYGPPGTGKTLLARA 172
Query: 265 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNT 324
VAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 173 VAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMA------------------------ 208
Query: 325 IVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGSSR+E SGGDSEVQRTMLELLNQLDGFE TK
Sbjct: 209 -----REHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFEPTK 257
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 53/68 (77%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMAR S MD
Sbjct: 164 TGKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPS----IIFMD 219
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 220 EIDSIGSS 227
>gi|392585032|gb|EIW74373.1| 26S proteasome regulatory complex ATPase RPT6 [Coniophora puteana
RWD-64-598 SS2]
Length = 401
Score = 365 bits (936), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 216/298 (72%), Positives = 236/298 (79%), Gaps = 30/298 (10%)
Query: 82 FKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKP 141
K YY KIE +L++ +K QNLRRL+AQRN LNA+VR+LREELQLL E GSYVGEVVK
Sbjct: 14 IKAYYQAKIEAAELLINQKTQNLRRLEAQRNALNARVRLLREELQLLHEPGSYVGEVVKV 73
Query: 142 MDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMM 201
M KKKVLVKV PEGK++VD + +ID+ +TP+ RVALR++SYT+HKILPNKVDPLVSLMM
Sbjct: 74 MGKKKVLVKVQPEGKYIVDFNSDIDVASLTPSIRVALRSDSYTIHKILPNKVDPLVSLMM 133
Query: 202 VEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLL 261
VEKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELF+ALGIAQPKGVLLYGPPGTGKTLL
Sbjct: 134 VEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLL 193
Query: 262 ARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTIL 321
ARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 194 ARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMA--------------------- 232
Query: 322 TNTIVCNFREHAPSIIFMDEID-SIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEID S GGDSEVQRTMLELLNQLDGFE TK
Sbjct: 233 --------REHAPSIIFMDEIDSIGSSRGDSGSGGGDSEVQRTMLELLNQLDGFEGTK 282
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 42/46 (91%), Positives = 45/46 (97%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMAR
Sbjct: 188 TGKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAR 233
>gi|378756633|gb|EHY66657.1| 26S protease regulatory subunit 8 [Nematocida sp. 1 ERTm2]
Length = 389
Score = 364 bits (934), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 182/295 (61%), Positives = 221/295 (74%), Gaps = 30/295 (10%)
Query: 82 FKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKP 141
+ Y ++ EEL++ + +K+QN+ RL +N LN +VR L+EE+ ++QE VGEV K
Sbjct: 4 LQQYNTSRAEELKVRIEKKQQNIERLDKIKNTLNDRVRQLKEEIAIIQEPSCTVGEVSKK 63
Query: 142 MDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMM 201
M K +LVK EGK +V ++ +D + + P RVALR ++Y L+KILP+KVDP++SLMM
Sbjct: 64 MGKNIILVKTTTEGKHLVQVEPQVDYDSLKPGMRVALRGDTYALYKILPSKVDPIISLMM 123
Query: 202 VEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLL 261
VEK PDSTY+M+GGL +QIKE+KEVIELP+KHPELF++LGIAQPKGVLLYGPPGTGKTLL
Sbjct: 124 VEKSPDSTYDMIGGLSDQIKEVKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLL 183
Query: 262 ARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTIL 321
ARAVAHHT+C FIRVSGSELVQK+IGEGSR+VRELFVMA
Sbjct: 184 ARAVAHHTQCRFIRVSGSELVQKYIGEGSRLVRELFVMA--------------------- 222
Query: 322 TNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
REHAPSIIFMDEIDSIGS R+E GS G SEVQRTMLELLNQLDGFEA
Sbjct: 223 --------REHAPSIIFMDEIDSIGSVRME-GSNGSSEVQRTMLELLNQLDGFEA 268
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/104 (54%), Positives = 67/104 (64%), Gaps = 10/104 (9%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSR+VRELFVMAR S MD
Sbjct: 178 TGKTLLARAVAHHTQCRFIRVSGSELVQKYIGEGSRLVRELFVMAREHAPS----IIFMD 233
Query: 72 VDEAIKS-----SEGFKPYYVTKIEEL-QLIVAEKEQNLRRLQA 109
++I S S G T +E L QL E QN++ + A
Sbjct: 234 EIDSIGSVRMEGSNGSSEVQRTMLELLNQLDGFEAHQNIKVIMA 277
>gi|299740233|ref|XP_001838951.2| endopeptidase [Coprinopsis cinerea okayama7#130]
gi|298404149|gb|EAU82882.2| endopeptidase [Coprinopsis cinerea okayama7#130]
Length = 408
Score = 364 bits (934), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 219/306 (71%), Positives = 237/306 (77%), Gaps = 37/306 (12%)
Query: 81 GFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVK 140
G K YY KIE ++++ +K QNLRRL+AQRN LNA+VR+LREELQLL E GSYVGEVVK
Sbjct: 13 GIKSYYQAKIEAAEILINQKTQNLRRLEAQRNALNARVRLLREELQLLHEPGSYVGEVVK 72
Query: 141 PMDKKKVLVKVHPEGKF-------VVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKV 193
M KKKVLVKV PEGK+ VVDID IDIN + P RVALR++SYT+H+ILPNKV
Sbjct: 73 VMGKKKVLVKVQPEGKYTNSNDELVVDIDSEIDINSLKPTLRVALRSDSYTIHRILPNKV 132
Query: 194 DPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGP 253
DPLVSLMMVEKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELF+ALGIAQPKGVLLYGP
Sbjct: 133 DPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGP 192
Query: 254 PGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLL 313
PGTGKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 193 PGTGKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMA------------- 239
Query: 314 FWSLLTILTNTIVCNFREHAPSIIFMDEID-SIGSSRIESGSGGDSEVQRTMLELLNQLD 372
REHAPSIIFMDEID S GGDSEVQRTMLELLNQLD
Sbjct: 240 ----------------REHAPSIIFMDEIDSIGSSRGESGSGGGDSEVQRTMLELLNQLD 283
Query: 373 GFEATK 378
GFE+TK
Sbjct: 284 GFESTK 289
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 42/46 (91%), Positives = 45/46 (97%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMAR
Sbjct: 195 TGKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAR 240
>gi|226467159|emb|CAX76060.1| Tat-binding protein 10 [Schistosoma japonicum]
Length = 431
Score = 363 bits (933), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 191/297 (64%), Positives = 222/297 (74%), Gaps = 28/297 (9%)
Query: 79 SEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEV 138
++G K YY+ KI+E Q I EK NLRRL+AQRNELNAKVRMLREELQLLQEQGS+VGEV
Sbjct: 41 TDGIKNYYMNKIDEHQFIYTEKVLNLRRLEAQRNELNAKVRMLREELQLLQEQGSFVGEV 100
Query: 139 VKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVS 198
+K MDKKKVLVKV PEGK+VVDIDKNI+++ ++PNCRVALR++SY LHKILP+KVDPLVS
Sbjct: 101 IKAMDKKKVLVKVQPEGKYVVDIDKNIEMSQISPNCRVALRSDSYILHKILPSKVDPLVS 160
Query: 199 LMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGK 258
LMMVEKVPDSTYEM+GGLD QIKEIKEVIELPVKHPELFDALGIAQPKG ++ K
Sbjct: 161 LMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGRVIIWTTRYRK 220
Query: 259 TLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLL 318
L+ + T + VS +V LF +S K+L +
Sbjct: 221 NLIGPGLLLITLNVHLSVS--------------VVPSLFKNSSAKELEWC---------- 256
Query: 319 TILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
+ REHAPSIIFMDE+DSIGS+R+ESG+GGDSEVQRTMLELLNQLDGFE
Sbjct: 257 ----GNLFVMAREHAPSIIFMDEVDSIGSTRLESGTGGDSEVQRTMLELLNQLDGFE 309
>gi|343426693|emb|CBQ70221.1| probable RPT6-26S proteasome regulatory subunit [Sporisorium
reilianum SRZ2]
Length = 422
Score = 363 bits (933), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 214/299 (71%), Positives = 238/299 (79%), Gaps = 30/299 (10%)
Query: 81 GFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVK 140
G + +Y +KI ++++ +K QNLRRL+AQRN LNA+VR+LREELQLLQE GSYVGEVVK
Sbjct: 34 GIQSFYQSKIRSYEILINQKTQNLRRLEAQRNALNARVRLLREELQLLQEPGSYVGEVVK 93
Query: 141 PMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLM 200
M KKKVLVKV PEGK+VVDI +ID++ +TP RVALR++SYTLHK+LPNK+DPLVSLM
Sbjct: 94 VMGKKKVLVKVQPEGKYVVDIASDIDVSTLTPTLRVALRSDSYTLHKVLPNKIDPLVSLM 153
Query: 201 MVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTL 260
MVEKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELF++LGIAQPKGVLLYGPPGTGKTL
Sbjct: 154 MVEKVPDSTYEMVGGLDRQIKEIKEVIELPVKHPELFESLGIAQPKGVLLYGPPGTGKTL 213
Query: 261 LARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTI 320
LARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 214 LARAVAHHTDCRFIRVSGSELVQKYIGEGSRMVRELFVMA-------------------- 253
Query: 321 LTNTIVCNFREHAPSIIFMDEID-SIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEID S GGDSEVQRTMLELLNQLDGFE TK
Sbjct: 254 ---------REHAPSIIFMDEIDSIGSSRGESGSGGGDSEVQRTMLELLNQLDGFEGTK 303
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 42/46 (91%), Positives = 45/46 (97%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMAR
Sbjct: 209 TGKTLLARAVAHHTDCRFIRVSGSELVQKYIGEGSRMVRELFVMAR 254
>gi|71004628|ref|XP_756980.1| hypothetical protein UM00833.1 [Ustilago maydis 521]
gi|46096674|gb|EAK81907.1| hypothetical protein UM00833.1 [Ustilago maydis 521]
Length = 424
Score = 363 bits (933), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 215/299 (71%), Positives = 238/299 (79%), Gaps = 30/299 (10%)
Query: 81 GFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVK 140
G + +Y +KI ++++ +K QNLRRL+AQRN LNA+VR+LREELQLLQE GSYVGEVVK
Sbjct: 36 GIQSFYQSKIRSYEILINQKTQNLRRLEAQRNALNARVRLLREELQLLQEPGSYVGEVVK 95
Query: 141 PMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLM 200
M KKKVLVKV PEGK+VVDI +IDI+ +TP RVALR++SYTLHK+LPNK+DPLVSLM
Sbjct: 96 VMGKKKVLVKVQPEGKYVVDIASDIDISALTPTLRVALRSDSYTLHKVLPNKIDPLVSLM 155
Query: 201 MVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTL 260
MVEKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELF++LGIAQPKGVLLYGPPGTGKTL
Sbjct: 156 MVEKVPDSTYEMVGGLDRQIKEIKEVIELPVKHPELFESLGIAQPKGVLLYGPPGTGKTL 215
Query: 261 LARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTI 320
LARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 216 LARAVAHHTDCRFIRVSGSELVQKYIGEGSRMVRELFVMA-------------------- 255
Query: 321 LTNTIVCNFREHAPSIIFMDEID-SIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEID S GGDSEVQRTMLELLNQLDGFE TK
Sbjct: 256 ---------REHAPSIIFMDEIDSIGSSRGESGSGGGDSEVQRTMLELLNQLDGFEGTK 305
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/46 (91%), Positives = 45/46 (97%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMAR
Sbjct: 211 TGKTLLARAVAHHTDCRFIRVSGSELVQKYIGEGSRMVRELFVMAR 256
>gi|13278504|gb|AAH04052.1| Psmc5 protein, partial [Mus musculus]
Length = 306
Score = 360 bits (924), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 179/216 (82%), Positives = 185/216 (85%), Gaps = 29/216 (13%)
Query: 163 KNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKE 222
KNIDINDVTPNCRVALRN+SYTLHKILPNKVDPLVSLMMVEKVPDSTYEM+GGLD QIKE
Sbjct: 1 KNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKE 60
Query: 223 IKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELV 282
IKEVIELPVKHPELF+ALGIAQPKGVLLYGPPGTGKTLLARAVAHHT+CTFIRVSGSELV
Sbjct: 61 IKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELV 120
Query: 283 QKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEI 342
QKFIGEG+RMVRELFVMA REHAPSIIFMDEI
Sbjct: 121 QKFIGEGARMVRELFVMA-----------------------------REHAPSIIFMDEI 151
Query: 343 DSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
DSIGSSR+E GSGGDSEVQRTMLELLNQLDGFEATK
Sbjct: 152 DSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATK 187
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 49/68 (72%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMAR S MD
Sbjct: 94 TGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPS----IIFMD 149
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 150 EIDSIGSS 157
>gi|429962460|gb|ELA42004.1| 26S protease regulatory subunit 8 [Vittaforma corneae ATCC 50505]
Length = 361
Score = 358 bits (920), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 175/270 (64%), Positives = 207/270 (76%), Gaps = 30/270 (11%)
Query: 107 LQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNID 166
++ QRN LN +VR +R+E+ ++QE S VG VV M KKK LVK P+GK+ V+++ +D
Sbjct: 1 MEQQRNSLNQQVRSIRDEISIVQEASSSVGTVVNKMGKKKCLVKTQPDGKYTVNVEDGVD 60
Query: 167 INDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEV 226
+ + P RVALR+++Y +H+ILP VDP+VSLMMVEKVPDSTY M+GGLD QIKEI+EV
Sbjct: 61 YDSLKPGTRVALRSDTYDIHRILPTSVDPIVSLMMVEKVPDSTYSMIGGLDEQIKEIREV 120
Query: 227 IELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFI 286
IE+P+KHPELF+ LGIAQPKGVLLYGPPGTGKTLLARAVAHHT+C FIRVSGSELVQK+I
Sbjct: 121 IEMPIKHPELFENLGIAQPKGVLLYGPPGTGKTLLARAVAHHTQCKFIRVSGSELVQKYI 180
Query: 287 GEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIG 346
GEGSR+VRELFVMA REHAPSIIFMDEIDSIG
Sbjct: 181 GEGSRLVRELFVMA-----------------------------REHAPSIIFMDEIDSIG 211
Query: 347 SSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
S+R + G GDSEVQRTMLELLNQLDGFEA
Sbjct: 212 SARTD-GKSGDSEVQRTMLELLNQLDGFEA 240
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/46 (89%), Positives = 45/46 (97%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSR+VRELFVMAR
Sbjct: 150 TGKTLLARAVAHHTQCKFIRVSGSELVQKYIGEGSRLVRELFVMAR 195
>gi|387594496|gb|EIJ89520.1| 26s proteasome regulatory subunit 8 [Nematocida parisii ERTm3]
gi|387596662|gb|EIJ94283.1| 26s proteasome regulatory subunit 8 [Nematocida parisii ERTm1]
Length = 389
Score = 358 bits (919), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 178/295 (60%), Positives = 221/295 (74%), Gaps = 30/295 (10%)
Query: 82 FKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKP 141
+ Y ++ EEL++ + +K+ N+ RL +N LN +VR L+EE+ ++QE VGE+ K
Sbjct: 4 LQQYNTSRAEELKVRIEKKQHNIERLDKIKNTLNHQVRQLKEEIAIIQEPSCTVGEIAKK 63
Query: 142 MDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMM 201
M K +LVK EGK +V ++ +D + + RVALR+++Y L+K+LP+KVDP+VSLMM
Sbjct: 64 MGKNIILVKTTTEGKHLVQVEPQVDYDSLKLGMRVALRSDTYALYKVLPSKVDPIVSLMM 123
Query: 202 VEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLL 261
VEK PDSTY+M+GGL++QIKE+KEVIELP+KHPELF++LGIAQPKGVLLYGPPGTGKTLL
Sbjct: 124 VEKTPDSTYDMIGGLNDQIKEVKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLL 183
Query: 262 ARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTIL 321
ARAVAHHT+C FIRVSGSELVQK+IGEGSR+VRELF+MA
Sbjct: 184 ARAVAHHTQCRFIRVSGSELVQKYIGEGSRLVRELFIMA--------------------- 222
Query: 322 TNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
REHAPSIIFMDEIDSIGS R+E GS G SEVQRTMLELLNQLDGFEA
Sbjct: 223 --------REHAPSIIFMDEIDSIGSVRME-GSNGSSEVQRTMLELLNQLDGFEA 268
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 56/104 (53%), Positives = 67/104 (64%), Gaps = 10/104 (9%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSR+VRELF+MAR S MD
Sbjct: 178 TGKTLLARAVAHHTQCRFIRVSGSELVQKYIGEGSRLVRELFIMAREHAPS----IIFMD 233
Query: 72 VDEAIKS-----SEGFKPYYVTKIEEL-QLIVAEKEQNLRRLQA 109
++I S S G T +E L QL E QN++ + A
Sbjct: 234 EIDSIGSVRMEGSNGSSEVQRTMLELLNQLDGFEAHQNIKVIMA 277
>gi|328856114|gb|EGG05237.1| ATP-dependent 26S proteasome regulatory subunit [Melampsora
larici-populina 98AG31]
Length = 408
Score = 358 bits (918), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 218/302 (72%), Positives = 233/302 (77%), Gaps = 30/302 (9%)
Query: 78 SSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGE 137
S G YY TK E LQL + K QNLRRL+AQRN LNA+VR+LREELQLLQE GSYVGE
Sbjct: 17 SQGGIGSYYQTKTESLQLTINRKTQNLRRLEAQRNSLNARVRLLREELQLLQEPGSYVGE 76
Query: 138 VVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLV 197
VVK M KKKVLVKV PEGK+VVD +I ++ +TP RVALR++SY LH ILP+KVDPLV
Sbjct: 77 VVKVMGKKKVLVKVQPEGKYVVDFAPSIQLSQLTPALRVALRSDSYQLHSILPSKVDPLV 136
Query: 198 SLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTG 257
SLMMVEKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTG
Sbjct: 137 SLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTG 196
Query: 258 KTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSL 317
KTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 197 KTLLARAVAHHTDCRFIRVSGSELVQKYIGEGSRMVRELFVMA----------------- 239
Query: 318 LTILTNTIVCNFREHAPSIIFMDEID-SIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
REHAPSIIFMDEID S GGDSEVQRTMLELLNQLDGFE
Sbjct: 240 ------------REHAPSIIFMDEIDSIGSSRGESGSGGGDSEVQRTMLELLNQLDGFEP 287
Query: 377 TK 378
+K
Sbjct: 288 SK 289
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 42/46 (91%), Positives = 45/46 (97%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMAR
Sbjct: 195 TGKTLLARAVAHHTDCRFIRVSGSELVQKYIGEGSRMVRELFVMAR 240
>gi|331231102|ref|XP_003328215.1| 26S protease regulatory subunit 8 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309307205|gb|EFP83796.1| 26S protease regulatory subunit 8 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 407
Score = 356 bits (913), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 218/299 (72%), Positives = 232/299 (77%), Gaps = 30/299 (10%)
Query: 81 GFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVK 140
G YY TK E LQL V K QNLRRL+AQRN LNA+VR+LREELQLLQE GSYVGEVVK
Sbjct: 19 GIGSYYQTKTEYLQLAVNRKTQNLRRLEAQRNSLNARVRLLREELQLLQEPGSYVGEVVK 78
Query: 141 PMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLM 200
M KKKVLVKV PEGK+VVD +I ++ +TP RVALR++SY LH ILP+KVDPLVSLM
Sbjct: 79 VMGKKKVLVKVQPEGKYVVDFAPSIQLSQLTPALRVALRSDSYQLHSILPSKVDPLVSLM 138
Query: 201 MVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTL 260
MVEKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTL
Sbjct: 139 MVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTL 198
Query: 261 LARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTI 320
LARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 199 LARAVAHHTDCRFIRVSGSELVQKYIGEGSRMVRELFVMA-------------------- 238
Query: 321 LTNTIVCNFREHAPSIIFMDEID-SIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEID S GGDSEVQRTMLELLNQLDGFE +K
Sbjct: 239 ---------REHAPSIIFMDEIDSIGSSRGESGSGGGDSEVQRTMLELLNQLDGFEPSK 288
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 42/46 (91%), Positives = 45/46 (97%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMAR
Sbjct: 194 TGKTLLARAVAHHTDCRFIRVSGSELVQKYIGEGSRMVRELFVMAR 239
>gi|198414075|ref|XP_002131047.1| PREDICTED: similar to MGC80185 protein [Ciona intestinalis]
Length = 311
Score = 356 bits (913), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 170/195 (87%), Positives = 183/195 (93%)
Query: 81 GFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVK 140
G + YY KI++LQ++V EK +N+RRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVK
Sbjct: 117 GVEQYYHVKIQDLQVVVNEKAKNVRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVK 176
Query: 141 PMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLM 200
P+DKKKVLVKVHPEGKFVVDIDK I I DVT NCRVALR++SY LHK+LPNKVDPLVSLM
Sbjct: 177 PIDKKKVLVKVHPEGKFVVDIDKAIKIEDVTANCRVALRSDSYVLHKVLPNKVDPLVSLM 236
Query: 201 MVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTL 260
MVEKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELF+ALGIAQPKGVLLYGPPGTGKTL
Sbjct: 237 MVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTL 296
Query: 261 LARAVAHHTECTFIR 275
LARAVAHHT+CTFIR
Sbjct: 297 LARAVAHHTDCTFIR 311
Score = 45.1 bits (105), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 18/20 (90%), Positives = 20/20 (100%)
Query: 12 SGKTLLARAVAHHTECTFIR 31
+GKTLLARAVAHHT+CTFIR
Sbjct: 292 TGKTLLARAVAHHTDCTFIR 311
>gi|255576968|ref|XP_002529369.1| 26S protease regulatory subunit, putative [Ricinus communis]
gi|223531189|gb|EEF33036.1| 26S protease regulatory subunit, putative [Ricinus communis]
Length = 382
Score = 355 bits (911), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 190/304 (62%), Positives = 213/304 (70%), Gaps = 67/304 (22%)
Query: 75 AIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSY 134
A+K EG + YY+ I E QL V +K NL RL+AQRNELN++VRMLREELQLLQE GSY
Sbjct: 25 AVKQGEGLRQYYLQHIHEHQLQVRQKTHNLNRLEAQRNELNSRVRMLREELQLLQEPGSY 84
Query: 135 VGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVD 194
VGEVVK M K KVLVKVHPEGK+VVDIDKNIDI +TP+ RVALRN+SY LH +LP+KVD
Sbjct: 85 VGEVVKVMGKNKVLVKVHPEGKYVVDIDKNIDITKITPSTRVALRNDSYVLHLVLPSKVD 144
Query: 195 PLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPP 254
PLV+LM VEKVPDSTY+M+GGLD QIKEIKEVIELP+KHPELF++LGIAQPK
Sbjct: 145 PLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPK-------- 196
Query: 255 GTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLF 314
K+IGEGSRMVRELFVMA
Sbjct: 197 -----------------------------KYIGEGSRMVRELFVMA-------------- 213
Query: 315 WSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSG-GDSEVQRTMLELLNQLDG 373
REHAPSIIFMDEIDSIGS+R+ESGSG GDSEVQRTMLELLNQLDG
Sbjct: 214 ---------------REHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDG 258
Query: 374 FEAT 377
FEA+
Sbjct: 259 FEAS 262
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/19 (89%), Positives = 19/19 (100%)
Query: 39 QKFIGEGSRMVRELFVMAR 57
+K+IGEGSRMVRELFVMAR
Sbjct: 196 KKYIGEGSRMVRELFVMAR 214
>gi|440493925|gb|ELQ76346.1| 26S proteasome regulatory complex, ATPase RPT6 [Trachipleistophora
hominis]
Length = 389
Score = 354 bits (909), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 177/291 (60%), Positives = 219/291 (75%), Gaps = 30/291 (10%)
Query: 85 YYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDK 144
Y++ + + L + K+ L++L +R +LN +VRML+EE++++QE + VG V+K M K
Sbjct: 7 YFMNETQRLHSEIENKKMELKKLNKKRYDLNNQVRMLKEEIRIVQEPSANVGTVIKKMGK 66
Query: 145 KKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEK 204
KVLVK P+GK++VD+D I+I ++ N RVALR+++Y L + LP VDP+VSLMMVEK
Sbjct: 67 NKVLVKTQPDGKYLVDVDDKINIEELKLNTRVALRSDNYKLIRALPTIVDPIVSLMMVEK 126
Query: 205 VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 264
VPD+TY+M+GGL QIKEI+EVIELP+K PELF+ LGI QPKGVLLYGPPGTGKTLLARA
Sbjct: 127 VPDATYDMIGGLKQQIKEIREVIELPIKSPELFENLGITQPKGVLLYGPPGTGKTLLARA 186
Query: 265 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNT 324
VAHHT+C FIRVSG+ELVQK+IGEGSR+VRELFVMA
Sbjct: 187 VAHHTDCKFIRVSGTELVQKYIGEGSRLVRELFVMA------------------------ 222
Query: 325 IVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
REHAPSIIFMDEIDSIGS+RIE G G+SEVQRTMLELLNQLDGFE
Sbjct: 223 -----REHAPSIIFMDEIDSIGSTRIEGGP-GNSEVQRTMLELLNQLDGFE 267
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/46 (86%), Positives = 45/46 (97%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+C FIRVSG+ELVQK+IGEGSR+VRELFVMAR
Sbjct: 178 TGKTLLARAVAHHTDCKFIRVSGTELVQKYIGEGSRLVRELFVMAR 223
>gi|169806084|ref|XP_001827787.1| 19S-PA700 proteasome regulatory particle subunit Rpt6p-S8
[Enterocytozoon bieneusi H348]
gi|161779073|gb|EDQ31099.1| 19S-PA700 proteasome regulatory particle subunit Rpt6p-S8
[Enterocytozoon bieneusi H348]
Length = 391
Score = 353 bits (907), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 172/294 (58%), Positives = 216/294 (73%), Gaps = 29/294 (9%)
Query: 85 YYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDK 144
YY +K E Q + + +++L+ +R L +VR +REE+ ++ + S VG V M
Sbjct: 9 YYASKEENAQKDILLLTERIKKLEQERESLTKQVREIREEISIITDSSSNVGVVCNKMGD 68
Query: 145 KKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEK 204
+K +VK+ P+GK++ +++ +ID N + PN RVALR ++Y +H+ILP KVDP+VSLMMVEK
Sbjct: 69 RKCMVKMQPDGKYICNVEPHIDYNALKPNTRVALRADNYDIHRILPTKVDPIVSLMMVEK 128
Query: 205 VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 264
VPDSTY M+GGLD QIKEI+EVIELP++HPELF+ LGIAQPKGVLLYGPPGTGKTLLARA
Sbjct: 129 VPDSTYSMIGGLDEQIKEIREVIELPIRHPELFENLGIAQPKGVLLYGPPGTGKTLLARA 188
Query: 265 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNT 324
VAHHT+C FIRVSGSELVQK++GEGSR+VRELF+MA
Sbjct: 189 VAHHTKCKFIRVSGSELVQKYVGEGSRLVRELFIMA------------------------ 224
Query: 325 IVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGS+R + G D+EVQRTMLELLNQLDGFE+ K
Sbjct: 225 -----REHAPSIIFMDEIDSIGSTRGDGGRSSDNEVQRTMLELLNQLDGFESEK 273
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/70 (64%), Positives = 54/70 (77%), Gaps = 4/70 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+C FIRVSGSELVQK++GEGSR+VRELF+MAR S MD
Sbjct: 180 TGKTLLARAVAHHTKCKFIRVSGSELVQKYVGEGSRLVRELFIMAREHAPS----IIFMD 235
Query: 72 VDEAIKSSEG 81
++I S+ G
Sbjct: 236 EIDSIGSTRG 245
>gi|123445295|ref|XP_001311409.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121893217|gb|EAX98479.1| conserved hypothetical protein [Trichomonas vaginalis G3]
Length = 388
Score = 353 bits (907), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 178/294 (60%), Positives = 221/294 (75%), Gaps = 30/294 (10%)
Query: 84 PYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMD 143
P+ ++I EL+ I++EK++N+ RLQAQRN+LN +VR L++E+ LQE S + E+V+ +
Sbjct: 5 PFISSRIAELESIISEKKRNVARLQAQRNDLNKQVRDLKDEIFHLQENPSEIAELVRKVG 64
Query: 144 KKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVE 203
K K L + EGKF+V +D +DI RVALR+++ LH+ILP KVDPLV+LM V+
Sbjct: 65 KNKALTSNNHEGKFLVTVDDEVDITGYPSGTRVALRSDTMVLHRILPTKVDPLVALMKVD 124
Query: 204 KVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLAR 263
KVPDST+EM+GG D QIK IKEVIELP+KHPE+F++LGI QPKGVLLYGPPGTGKTLLAR
Sbjct: 125 KVPDSTFEMIGGCDRQIKMIKEVIELPIKHPEIFESLGIPQPKGVLLYGPPGTGKTLLAR 184
Query: 264 AVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTN 323
AVAHHT+ TFIRVSGSELVQK+IGEG+RMVRELFVMA
Sbjct: 185 AVAHHTDTTFIRVSGSELVQKYIGEGARMVRELFVMA----------------------- 221
Query: 324 TIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEAT 377
R+HAPSIIFMDEIDSIGS+R +G+ D+EVQRTMLELLNQLDGFEA+
Sbjct: 222 ------RQHAPSIIFMDEIDSIGSAR-GAGARSDTEVQRTMLELLNQLDGFEAS 268
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/84 (58%), Positives = 59/84 (70%), Gaps = 4/84 (4%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+ TFIRVSGSELVQK+IGEG+RMVRELFVMAR S MD
Sbjct: 177 TGKTLLARAVAHHTDTTFIRVSGSELVQKYIGEGARMVRELFVMARQHAPS----IIFMD 232
Query: 72 VDEAIKSSEGFKPYYVTKIEELQL 95
++I S+ G T+++ L
Sbjct: 233 EIDSIGSARGAGARSDTEVQRTML 256
>gi|145494081|ref|XP_001433035.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124400151|emb|CAK65638.1| unnamed protein product [Paramecium tetraurelia]
Length = 387
Score = 352 bits (903), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 180/299 (60%), Positives = 225/299 (75%), Gaps = 35/299 (11%)
Query: 80 EGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVV 139
+ + Y K++ L+ ++AEK+ N++R +AQRNELN+ VR ++EEL +QE SYVG+VV
Sbjct: 5 QSVRQYIQGKLDLLEFMIAEKQANVKRQEAQRNELNSLVRQVKEELSAMQEPHSYVGDVV 64
Query: 140 KPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSL 199
K M K KVLVKV+PEGK+VV +DK+I I D PN RVAL+++SY LHKILP KVDPLVSL
Sbjct: 65 KQMGKDKVLVKVNPEGKYVVTLDKSIKIEDCKPNTRVALKSDSYVLHKILPTKVDPLVSL 124
Query: 200 MMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKT 259
M VEKVPDSTY+M+GGLD Q+KE+KEVIELP+KHPE+F++LGIAQPKGVLLYGPPGTGKT
Sbjct: 125 MKVEKVPDSTYDMIGGLDQQVKEVKEVIELPIKHPEIFESLGIAQPKGVLLYGPPGTGKT 184
Query: 260 LLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLT 319
LLARA+AHHT+CTFIRVSGSEL K+L ++ LL+ L++
Sbjct: 185 LLARAIAHHTDCTFIRVSGSEL---------------------KELEWSESYLLW--LVS 221
Query: 320 ILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
I HA S F+DE+DSIG +R+E GGDSEVQRTMLELLNQLDGFE+T+
Sbjct: 222 I----------HHAQS--FIDEVDSIGGARMEGERGGDSEVQRTMLELLNQLDGFESTQ 268
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/26 (88%), Positives = 26/26 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSEL 37
+GKTLLARA+AHHT+CTFIRVSGSEL
Sbjct: 181 TGKTLLARAIAHHTDCTFIRVSGSEL 206
>gi|429964826|gb|ELA46824.1| 26S proteasome subunit P45 family protein [Vavraia culicis
'floridensis']
Length = 389
Score = 352 bits (902), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 175/291 (60%), Positives = 219/291 (75%), Gaps = 30/291 (10%)
Query: 85 YYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDK 144
Y++ + + L + K L++L ++ +LN +VRML+EE++++QE + VG V+K M K
Sbjct: 7 YFMNETQRLHNEIENKRMELKKLNKKQYDLNNQVRMLKEEIRIVQEPSANVGTVIKKMGK 66
Query: 145 KKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEK 204
KVLVK P+GK++VD+D+ I++ ++ N RVALR+++Y L + LP VDP+VSLMMVEK
Sbjct: 67 NKVLVKTQPDGKYMVDVDEKINMEELKLNTRVALRSDNYKLIRTLPTIVDPIVSLMMVEK 126
Query: 205 VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 264
VPD+TY+M+GGL QIKEI+EVIELP+K+PELF+ LGI QPKGVLLYGPPGTGKTLLARA
Sbjct: 127 VPDATYDMIGGLKQQIKEIREVIELPIKNPELFENLGITQPKGVLLYGPPGTGKTLLARA 186
Query: 265 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNT 324
VAHHT+C FIRVSG+ELVQK+IGEGSR+VRELFVMA
Sbjct: 187 VAHHTDCKFIRVSGTELVQKYIGEGSRLVRELFVMA------------------------ 222
Query: 325 IVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
REHAPSIIFMDEIDSIGS+R E G GDSEVQRTMLELLNQLDGFE
Sbjct: 223 -----REHAPSIIFMDEIDSIGSTRSEGGK-GDSEVQRTMLELLNQLDGFE 267
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 49/74 (66%), Positives = 56/74 (75%), Gaps = 6/74 (8%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+C FIRVSG+ELVQK+IGEGSR+VRELFVMAR S MD
Sbjct: 178 TGKTLLARAVAHHTDCKFIRVSGTELVQKYIGEGSRLVRELFVMAREHAPS----IIFMD 233
Query: 72 VDEAIKS--SEGFK 83
++I S SEG K
Sbjct: 234 EIDSIGSTRSEGGK 247
>gi|385301840|gb|EIF46002.1| 26s protease regulatory subunit 8 [Dekkera bruxellensis AWRI1499]
Length = 347
Score = 349 bits (895), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 175/243 (72%), Positives = 199/243 (81%), Gaps = 30/243 (12%)
Query: 137 EVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPL 196
+++K +++KVLVKVHPEGK+VV++ +IDI DVT RV LR+++Y LHKILPNKVDPL
Sbjct: 15 KLLKLWERRKVLVKVHPEGKYVVNVADSIDIKDVTAGLRVCLRSDTYELHKILPNKVDPL 74
Query: 197 VSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGT 256
+SLMMVEKVPDSTY+M+GGLD QIKEIKEVIELPVKHPELF++LGIAQPKGV+LYGPPGT
Sbjct: 75 ISLMMVEKVPDSTYDMIGGLDKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGT 134
Query: 257 GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWS 316
GKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMV ELFVMA
Sbjct: 135 GKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVXELFVMA---------------- 178
Query: 317 LLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGS-GGDSEVQRTMLELLNQLDGFE 375
REHAPSIIFMDEIDSIGSSR+ES S GGDSEVQRTMLELLNQLDGFE
Sbjct: 179 -------------REHAPSIIFMDEIDSIGSSRVESSSGGGDSEVQRTMLELLNQLDGFE 225
Query: 376 ATK 378
++K
Sbjct: 226 SSK 228
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 52/68 (76%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMV ELFVMAR S MD
Sbjct: 134 TGKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVXELFVMAREHAPS----IIFMD 189
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 190 EIDSIGSS 197
>gi|401406842|ref|XP_003882870.1| 26S proteasome regulatory subunit S4 like AAA ATpase, related
[Neospora caninum Liverpool]
gi|325117286|emb|CBZ52838.1| 26S proteasome regulatory subunit S4 like AAA ATpase, related
[Neospora caninum Liverpool]
Length = 375
Score = 338 bits (868), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 184/300 (61%), Positives = 206/300 (68%), Gaps = 64/300 (21%)
Query: 79 SEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEV 138
S G + YY KI+ LQ ++ EK Q+ RRL+AQRNELNAKVR LR+ELQ+L E GSYVGEV
Sbjct: 21 SSGLRHYYEQKIDGLQRVINEKSQDKRRLEAQRNELNAKVRELRDELQVLLEPGSYVGEV 80
Query: 139 VKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVS 198
VK M + KVLVKV+PEGK+VVD+ KNID++ T N RVAL N+SY LHKILP K+DPLVS
Sbjct: 81 VKVMGRNKVLVKVNPEGKYVVDVAKNIDLSQCTVNTRVALLNDSYRLHKILPTKIDPLVS 140
Query: 199 LMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGK 258
LM VEKVP+STYEM GVLLYGPPGTGK
Sbjct: 141 LMKVEKVPESTYEM----------------------------------GVLLYGPPGTGK 166
Query: 259 TLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLL 318
TLLARAVAHHT+CTFIRVSG ELVQK+IGEGSRMVRELFVMA
Sbjct: 167 TLLARAVAHHTDCTFIRVSGGELVQKYIGEGSRMVRELFVMA------------------ 208
Query: 319 TILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGS R E G GDSEVQRTM+ELLNQLDGFE+T+
Sbjct: 209 -----------REHAPSIIFMDEIDSIGSQRTE-GEHGDSEVQRTMMELLNQLDGFESTQ 256
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 42/46 (91%), Positives = 45/46 (97%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+CTFIRVSG ELVQK+IGEGSRMVRELFVMAR
Sbjct: 164 TGKTLLARAVAHHTDCTFIRVSGGELVQKYIGEGSRMVRELFVMAR 209
>gi|402467217|gb|EJW02555.1| 26S proteasome subunit P45 family protein [Edhazardia aedis USNM
41457]
Length = 387
Score = 331 bits (848), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 174/299 (58%), Positives = 216/299 (72%), Gaps = 34/299 (11%)
Query: 82 FKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKP 141
F YY K +EL ++E+ + L+ +R++LN +R ++EEL ++ + S +G VVK
Sbjct: 2 FDQYYSNKSKELLSQQVDEERAILILEQKRDDLNNLIRKIKEELTMVTDYSSNIGTVVKR 61
Query: 142 MDKKKVLVKVHPEGKFVVDIDKNIDIN--DVTPNCRVALRNESYTLHKILPNKVDPLVSL 199
M K LVK + +GK++ + N +N D+ RVALR+++Y +HKILP+ VDPLVSL
Sbjct: 62 MGKF-TLVKSNYDGKYLCKCESNSKLNPEDLKSGTRVALRSDNYAIHKILPSIVDPLVSL 120
Query: 200 MMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKT 259
MMVEKVPDSTY+ +GGLD Q +E+KEVIELP+KHPELF+ LGI+QPKGVLLYGPPGTGKT
Sbjct: 121 MMVEKVPDSTYDQIGGLDMQKQEMKEVIELPIKHPELFENLGISQPKGVLLYGPPGTGKT 180
Query: 260 LLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLT 319
LLARAVAHHT+C FIRVSGSELVQK+IGEGSR+VRELFVMA
Sbjct: 181 LLARAVAHHTKCRFIRVSGSELVQKYIGEGSRLVRELFVMA------------------- 221
Query: 320 ILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIG +R + GGDSEVQRTMLELLNQLDGFE+T+
Sbjct: 222 ----------REHAPSIIFMDEIDSIGQARTD--KGGDSEVQRTMLELLNQLDGFESTQ 268
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/46 (89%), Positives = 45/46 (97%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSR+VRELFVMAR
Sbjct: 177 TGKTLLARAVAHHTKCRFIRVSGSELVQKYIGEGSRLVRELFVMAR 222
>gi|300175281|emb|CBK20592.2| unnamed protein product [Blastocystis hominis]
Length = 402
Score = 328 bits (842), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 177/312 (56%), Positives = 218/312 (69%), Gaps = 34/312 (10%)
Query: 70 MDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQ 129
M+V+ ++ YY +IE+ Q V EK Q + RL+ QRN+LNA+VR L++E++ L
Sbjct: 1 MEVESETTQNDWIGSYYARRIEDKQREVNEKRQEMERLEKQRNQLNAEVRGLQDEIRRLL 60
Query: 130 EQGSYVGEVVK--PMD-KKKVLVKV-HPEGKFVVDIDKNIDINDVTPNCRVALRNESYTL 185
+ +++K MD K K +VK + VVDID+ I I+ + PN RVAL S +
Sbjct: 61 APSWSIAQIIKVVKMDGKNKAIVKDGMMDSDCVVDIDETIPIDQLKPNTRVALHAHSQKV 120
Query: 186 HKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQP 245
KI+P+KVDP+VSLM VEKVPDSTY+M GGLD QI EIKEVIELP KHPELF+ALG+ QP
Sbjct: 121 AKIMPSKVDPIVSLMKVEKVPDSTYDMCGGLDKQIAEIKEVIELPFKHPELFEALGVQQP 180
Query: 246 KGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKL 305
KGVLLYGPPGTGKTLLARAVAHHT+C+FIR+SGSELVQK+IGEG+RMVRELFV A
Sbjct: 181 KGVLLYGPPGTGKTLLARAVAHHTDCSFIRLSGSELVQKYIGEGARMVRELFVSA----- 235
Query: 306 AFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTML 365
REH P +IFMDEIDSIGS+R ES GG++EVQRTM+
Sbjct: 236 ------------------------REHEPCLIFMDEIDSIGSTRRES-RGGENEVQRTMM 270
Query: 366 ELLNQLDGFEAT 377
ELLNQLDGFE +
Sbjct: 271 ELLNQLDGFEPS 282
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/46 (84%), Positives = 45/46 (97%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+C+FIR+SGSELVQK+IGEG+RMVRELFV AR
Sbjct: 191 TGKTLLARAVAHHTDCSFIRLSGSELVQKYIGEGARMVRELFVSAR 236
>gi|183234769|ref|XP_001914077.1| 26S protease regulatory subunit [Entamoeba histolytica HM-1:IMSS]
gi|169800916|gb|EDS89146.1| 26S protease regulatory subunit, putative [Entamoeba histolytica
HM-1:IMSS]
Length = 375
Score = 318 bits (815), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 167/294 (56%), Positives = 204/294 (69%), Gaps = 52/294 (17%)
Query: 85 YYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDK 144
YY KI+E+ + QN RRL ++RN+LN +VR ++EELQLL E VGEV++ + K
Sbjct: 15 YYKHKIDEMTYEYCTELQNQRRLISKRNQLNDQVRRMKEELQLLSEPSCSVGEVIRAVGK 74
Query: 145 KKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEK 204
KVLVK EGK+VV ++ IDI + PN RVAL++++Y++ K+LPN+VDPL+SLM VEK
Sbjct: 75 DKVLVKSTQEGKYVVKVEAGIDIRALKPNQRVALKSDTYSICKVLPNQVDPLISLMRVEK 134
Query: 205 VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 264
VPDSTY+M+GGLD QIKEIKEVIELP+KHPELF++LGIAQPKGVLLYGPPGTGKTLLARA
Sbjct: 135 VPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARA 194
Query: 265 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNT 324
VAHHT+CTFIRVSG+ELVQK+ M +E+
Sbjct: 195 VAHHTDCTFIRVSGTELVQKY------MEKEI---------------------------- 220
Query: 325 IVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
DSIGSSR+E SGGDSEVQRTMLEL+NQLDGFE TK
Sbjct: 221 ------------------DSIGSSRMEGESGGDSEVQRTMLELVNQLDGFEPTK 256
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 51/81 (62%), Gaps = 8/81 (9%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVM--ARCKGSSRGTEFFT 69
+GKTLLARAVAHHT+CTFIRVSG+ELVQK+ M +E+ + +R +G S G
Sbjct: 186 TGKTLLARAVAHHTDCTFIRVSGTELVQKY------MEKEIDSIGSSRMEGESGGDSEVQ 239
Query: 70 MDVDEAIKSSEGFKPYYVTKI 90
+ E + +GF+P K+
Sbjct: 240 RTMLELVNQLDGFEPTKNIKV 260
>gi|442750009|gb|JAA67164.1| Putative 26s proteasome regulatory complex atpase rpt6 [Ixodes
ricinus]
Length = 226
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 151/173 (87%), Positives = 163/173 (94%), Gaps = 1/173 (0%)
Query: 70 MDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQ 129
M+VD++ K +G K Y++TKIEELQL+V+ K QNLRRLQAQRNELNAKVRMLREELQLLQ
Sbjct: 17 MEVDDSPKG-DGLKQYHITKIEELQLVVSGKTQNLRRLQAQRNELNAKVRMLREELQLLQ 75
Query: 130 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKIL 189
EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDI +VTPN RVALRN+SYTLHKIL
Sbjct: 76 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDIANVTPNSRVALRNDSYTLHKIL 135
Query: 190 PNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGI 242
PNKVDPLVSLMMVEKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELF+ALG+
Sbjct: 136 PNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFEALGM 188
>gi|395738588|ref|XP_003777113.1| PREDICTED: LOW QUALITY PROTEIN: 26S protease regulatory subunit
8-like [Pongo abelii]
Length = 406
Score = 304 bits (779), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 184/309 (59%), Positives = 215/309 (69%), Gaps = 49/309 (15%)
Query: 70 MDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQ 129
M+++E K+ G YY++KIEELQLI+ +K QNL R Q RN LNAKV +L+EELQLLQ
Sbjct: 9 MELEEE-KAGSGLCQYYLSKIEELQLILNDKTQNLWRRQVHRNALNAKVCLLQEELQLLQ 67
Query: 130 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKIL 189
EQ S V EVV+ MDKKKVLVKVH +GKFV+D++KNI I+DVTP+ V LRN+SYTL+KIL
Sbjct: 68 EQDSCVREVVQAMDKKKVLVKVHLKGKFVIDVEKNISISDVTPSSLVVLRNDSYTLYKIL 127
Query: 190 PNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVL 249
PNKVD LVSLMMV+KVPDSTYEM+G LD QIKEIKEVI LP KHPELF ALGIAQPKG+L
Sbjct: 128 PNKVDSLVSLMMVKKVPDSTYEMIGRLDRQIKEIKEVINLPAKHPELFKALGIAQPKGML 187
Query: 250 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAH 309
L G+ LA AVAHH +CTFI VSGSELVQKFIGE
Sbjct: 188 L------GRH-LAWAVAHHRDCTFIHVSGSELVQKFIGE--------------------- 219
Query: 310 HPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN 369
L W + S+IFMDEIDS SS +E +GG+SEVQ+TML
Sbjct: 220 --FLXW--------------QRKCSSVIFMDEIDSFSSSELEGDAGGNSEVQQTML---- 259
Query: 370 QLDGFEATK 378
+ DGFEATK
Sbjct: 260 RXDGFEATK 268
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/28 (85%), Positives = 25/28 (89%)
Query: 17 LARAVAHHTECTFIRVSGSELVQKFIGE 44
LA AVAHH +CTFI VSGSELVQKFIGE
Sbjct: 192 LAWAVAHHRDCTFIHVSGSELVQKFIGE 219
>gi|160331725|ref|XP_001712569.1| prsS8 [Hemiselmis andersenii]
gi|159766018|gb|ABW98244.1| prsS8 [Hemiselmis andersenii]
Length = 407
Score = 304 bits (778), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 154/282 (54%), Positives = 202/282 (71%), Gaps = 33/282 (11%)
Query: 101 EQNLRRLQAQRNE---LNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKF 157
E+N+ + Q LN +++ +E+ LL+++ S++GEVV+ ++K K+LVK++ +GKF
Sbjct: 35 EKNILKFQKNLTSIEILNEQLKNFLQEIFLLKKEFSFIGEVVQRINKDKILVKINQDGKF 94
Query: 158 VVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLD 217
+V+ K ++ +P R+A+R+ +Y H+IL +K DPLVSLM +E VP STY+ +GGLD
Sbjct: 95 LVNCGKKMERIQTSPGARIAIRSNNYIAHRILSSKTDPLVSLMKIENVPLSTYDSIGGLD 154
Query: 218 NQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVS 277
QI +IKEVIE P+K PE+F+ LG+ QPKGVLLYGPPGTGKTLLARAVAHH+ CTFIR+S
Sbjct: 155 FQIIQIKEVIEFPIKFPEIFETLGVTQPKGVLLYGPPGTGKTLLARAVAHHSGCTFIRMS 214
Query: 278 GSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSII 337
GSELVQK+IGEGSRMVRE+F+MA + HAPSII
Sbjct: 215 GSELVQKYIGEGSRMVREIFLMA-----------------------------KTHAPSII 245
Query: 338 FMDEIDSIGSSRIES-GSGGDSEVQRTMLELLNQLDGFEATK 378
FMDE+DS+GSSR S S GDSEVQRTMLELLNQLDGFEA +
Sbjct: 246 FMDEVDSVGSSRGNSEDSNGDSEVQRTMLELLNQLDGFEAQQ 287
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/117 (47%), Positives = 71/117 (60%), Gaps = 8/117 (6%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHH+ CTFIR+SGSELVQK+IGEGSRMVRE+F+MA+ S MD
Sbjct: 193 TGKTLLARAVAHHSGCTFIRMSGSELVQKYIGEGSRMVREIFLMAKTHAPS----IIFMD 248
Query: 72 VDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLL 128
+++ SS G E+Q + E L +AQ+ N KV M L +L
Sbjct: 249 EVDSVGSSRG-NSEDSNGDSEVQRTMLELLNQLDGFEAQQ---NIKVMMATNRLDVL 301
>gi|2661071|gb|AAB88187.1| similar to 26S proteasome subunit p45 [Homo sapiens]
Length = 280
Score = 301 bits (771), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 152/188 (80%), Positives = 157/188 (83%), Gaps = 29/188 (15%)
Query: 191 NKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLL 250
NKVDPLVSLMMVEKVPDSTYEM+GGLD QIKEIKEVIELPVKHPELF+ALGIAQPKGVLL
Sbjct: 3 NKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLL 62
Query: 251 YGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHH 310
YGPPGTGKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMA
Sbjct: 63 YGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMA---------- 112
Query: 311 PLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQ 370
REHAPSIIFMDEIDSIGSSR+E GSGGDSEVQRTMLELLNQ
Sbjct: 113 -------------------REHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQ 153
Query: 371 LDGFEATK 378
LDGFEATK
Sbjct: 154 LDGFEATK 161
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 49/68 (72%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMAR S MD
Sbjct: 68 TGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPS----IIFMD 123
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 124 EIDSIGSS 131
>gi|410058735|ref|XP_003951025.1| PREDICTED: LOW QUALITY PROTEIN: 26S protease regulatory subunit
8-like [Pan troglodytes]
Length = 388
Score = 293 bits (751), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 176/297 (59%), Positives = 204/297 (68%), Gaps = 45/297 (15%)
Query: 70 MDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQ 129
M+++E K+ G YY++KIEELQLI+ +K QNL R Q RNELN KV +L+EELQLLQ
Sbjct: 9 MELEEE-KAGSGLCQYYLSKIEELQLILNDKTQNLWRRQVHRNELNVKVCLLQEELQLLQ 67
Query: 130 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKIL 189
S V EVV+ M KKKVLVKVH + KFVVD+DKNI I+DVTP+ V LRN+SYTLHKIL
Sbjct: 68 XXDSCVREVVQAMGKKKVLVKVHLKDKFVVDVDKNISISDVTPSSLVVLRNDSYTLHKIL 127
Query: 190 PNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVL 249
PNKVD LVSLMMV+KVPDS YEM+G LD QIKEIKEVI+LP KHPELF ALGIAQ KG+L
Sbjct: 128 PNKVDSLVSLMMVKKVPDSAYEMIGRLDRQIKEIKEVIDLPAKHPELFKALGIAQTKGML 187
Query: 250 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAH 309
L K LLA A+AHH +CTFI VSGSELVQKFIGE
Sbjct: 188 LX------KRLLAWALAHHRDCTFIHVSGSELVQKFIGE--------------------- 220
Query: 310 HPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESG-SGGDSEVQRTML 365
L W + S+IFMDEIDS GSS +E G +GG+SEVQ+TML
Sbjct: 221 --FLXW--------------QRKCSSVIFMDEIDSFGSSELEEGDAGGNSEVQQTML 261
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/31 (80%), Positives = 27/31 (87%)
Query: 14 KTLLARAVAHHTECTFIRVSGSELVQKFIGE 44
K LLA A+AHH +CTFI VSGSELVQKFIGE
Sbjct: 190 KRLLAWALAHHRDCTFIHVSGSELVQKFIGE 220
>gi|449690257|ref|XP_002168405.2| PREDICTED: 26S protease regulatory subunit 8-like, partial [Hydra
magnipapillata]
Length = 296
Score = 291 bits (745), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 157/206 (76%), Positives = 162/206 (78%), Gaps = 31/206 (15%)
Query: 175 RVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHP 234
RVALRN+SYTLHKILPNKVDPLVSLM EKVPDSTYEM+GGLD QIKEIKEVIELPVKHP
Sbjct: 1 RVALRNDSYTLHKILPNKVDPLVSLMRGEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHP 60
Query: 235 ELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVR 294
ELF+ALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVR
Sbjct: 61 ELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVR 120
Query: 295 ELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSI--GSSRIES 352
ELFV+A REHAPSIIFMDEIDSI
Sbjct: 121 ELFVLA-----------------------------REHAPSIIFMDEIDSIGSSRIESGG 151
Query: 353 GSGGDSEVQRTMLELLNQLDGFEATK 378
GGDSEVQRTMLELLNQLDGFE T+
Sbjct: 152 SGGGDSEVQRTMLELLNQLDGFEPTQ 177
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/46 (95%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFV+AR
Sbjct: 82 TGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVLAR 127
>gi|323337619|gb|EGA78864.1| Rpt6p [Saccharomyces cerevisiae Vin13]
Length = 285
Score = 291 bits (745), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 145/194 (74%), Positives = 156/194 (80%), Gaps = 29/194 (14%)
Query: 185 LHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQ 244
LHK+L NK DPLVSLMMVEKVPDSTY+MVGGL QIKEIKEVIELPVKHPELF++LGIAQ
Sbjct: 2 LHKVLENKADPLVSLMMVEKVPDSTYDMVGGLTKQIKEIKEVIELPVKHPELFESLGIAQ 61
Query: 245 PKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKK 304
PKGV+LYGPPGTGKTLLARAVAHHT+C FIRVSG+ELVQK+IGEGSRMVRELFVMA
Sbjct: 62 PKGVILYGPPGTGKTLLARAVAHHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMA---- 117
Query: 305 LAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTM 364
REHAPSIIFMDEIDSIGS+R+E GGDSEVQRTM
Sbjct: 118 -------------------------REHAPSIIFMDEIDSIGSTRVEGSGGGDSEVQRTM 152
Query: 365 LELLNQLDGFEATK 378
LELLNQLDGFE +K
Sbjct: 153 LELLNQLDGFETSK 166
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/46 (89%), Positives = 45/46 (97%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+C FIRVSG+ELVQK+IGEGSRMVRELFVMAR
Sbjct: 73 TGKTLLARAVAHHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMAR 118
>gi|195164327|ref|XP_002023000.1| GL16409 [Drosophila persimilis]
gi|194105062|gb|EDW27105.1| GL16409 [Drosophila persimilis]
Length = 269
Score = 291 bits (744), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 149/179 (83%), Positives = 149/179 (83%), Gaps = 29/179 (16%)
Query: 200 MMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKT 259
MMVEKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKT
Sbjct: 1 MMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKT 60
Query: 260 LLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLT 319
LLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA
Sbjct: 61 LLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA------------------- 101
Query: 320 ILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK
Sbjct: 102 ----------REHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 150
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/68 (75%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR S MD
Sbjct: 57 TGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPS----IIFMD 112
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 113 EIDSIGSS 120
>gi|148909913|gb|ABR18043.1| unknown [Picea sitchensis]
Length = 288
Score = 290 bits (743), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 146/191 (76%), Positives = 159/191 (83%), Gaps = 30/191 (15%)
Query: 188 ILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKG 247
ILP+KVDPLV+LM VEKVPDSTY+M+GGLD QIKEIKEVIELP+KHPELF++LGIAQPKG
Sbjct: 7 ILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKG 66
Query: 248 VLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAF 307
VLLYGPPGTGKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 67 VLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMA------- 119
Query: 308 AHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSG-GDSEVQRTMLE 366
REHAPSIIFMDEIDSIGS+R+ESG+G GDSEVQRTMLE
Sbjct: 120 ----------------------REHAPSIIFMDEIDSIGSARMESGTGNGDSEVQRTMLE 157
Query: 367 LLNQLDGFEAT 377
LLNQLDGFEA+
Sbjct: 158 LLNQLDGFEAS 168
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/46 (93%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMAR
Sbjct: 75 TGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAR 120
>gi|268568260|ref|XP_002647983.1| Hypothetical protein CBG23920 [Caenorhabditis briggsae]
Length = 269
Score = 285 bits (730), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 145/179 (81%), Positives = 147/179 (82%), Gaps = 29/179 (16%)
Query: 200 MMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKT 259
MMVEKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKT
Sbjct: 1 MMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKT 60
Query: 260 LLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLT 319
LLARAVAHHTECTFIRVSGSELVQKFIGEG+RMVRELFVMA
Sbjct: 61 LLARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMA------------------- 101
Query: 320 ILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGSSR+E SGGDSEVQRTMLELLNQLDGFEATK
Sbjct: 102 ----------REHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFEATK 150
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/68 (73%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHTECTFIRVSGSELVQKFIGEG+RMVRELFVMAR S MD
Sbjct: 57 TGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPS----IIFMD 112
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 113 EIDSIGSS 120
>gi|149054559|gb|EDM06376.1| peptidase (prosome, macropain) 26S subunit, ATPase 5, isoform CRA_e
[Rattus norvegicus]
Length = 269
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 143/179 (79%), Positives = 148/179 (82%), Gaps = 29/179 (16%)
Query: 200 MMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKT 259
MMVEKVPDSTYEM+GGLD QIKEIKEVIELPVKHPELF+ALGIAQPKGVLLYGPPGTGKT
Sbjct: 1 MMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKT 60
Query: 260 LLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLT 319
LLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMA
Sbjct: 61 LLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMA------------------- 101
Query: 320 ILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGSSR+E GSGGDSEVQRTMLELLNQLDGFEATK
Sbjct: 102 ----------REHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATK 150
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 49/68 (72%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMAR S MD
Sbjct: 57 TGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPS----IIFMD 112
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 113 EIDSIGSS 120
>gi|402580721|gb|EJW74670.1| 26S protease regulatory subunit 8 [Wuchereria bancrofti]
Length = 268
Score = 283 bits (723), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 143/178 (80%), Positives = 146/178 (82%), Gaps = 29/178 (16%)
Query: 201 MVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTL 260
MVEKVPDSTYEM+GGLD QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTL
Sbjct: 1 MVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTL 60
Query: 261 LARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTI 320
LARAVAHHTECTFIRVSGSELVQKFIGEG+RMVRELFVMA
Sbjct: 61 LARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMA-------------------- 100
Query: 321 LTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGSSR+E SGGDSEVQRTMLELLNQLDGFEATK
Sbjct: 101 ---------REHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFEATK 149
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/68 (73%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHTECTFIRVSGSELVQKFIGEG+RMVRELFVMAR S MD
Sbjct: 56 TGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPS----IIFMD 111
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 112 EIDSIGSS 119
>gi|162605842|ref|XP_001713436.1| 26S proteasome SU [Guillardia theta]
gi|13794368|gb|AAK39745.1|AF083031_102 26S proteasome SU [Guillardia theta]
Length = 400
Score = 279 bits (714), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 148/295 (50%), Positives = 200/295 (67%), Gaps = 31/295 (10%)
Query: 86 YVTKIEELQLIVAEKEQNLRRLQAQR-NELNAKVRMLREELQLLQEQGSYVGEVVKPMDK 144
Y K + VA+ ++ +R N N K+ +EL L ++ S +GE++K +
Sbjct: 16 YFQKKNLYKSFVAKIISDIENFNYKRINVTNKKIIQFIKELSNLHKESSLIGEILKINSQ 75
Query: 145 KKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEK 204
++VK++P+GKF++ + K I++ + RVA+RNESY +HK+LP+K DPLVSLM +E
Sbjct: 76 NDIVVKINPDGKFILKLGKKINLKKIKIGDRVAIRNESYEIHKVLPSKTDPLVSLMKIEN 135
Query: 205 VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 264
VP Y M+GGL++QI +IKE+IELP+K+PE+F+ LG+ QPKG+LLYGPPGTGKTL+ARA
Sbjct: 136 VPFCNYNMIGGLESQIGKIKEIIELPLKYPEIFEILGVFQPKGILLYGPPGTGKTLIARA 195
Query: 265 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNT 324
VA H+ C+FIRVSGSELVQK+IGEG RMVRE+F +A
Sbjct: 196 VAFHSNCSFIRVSGSELVQKYIGEGGRMVREIFSIA------------------------ 231
Query: 325 IVCNFREHAPSIIFMDEIDSIGSSRIES-GSGGDSEVQRTMLELLNQLDGFEATK 378
++++PSIIFMDE+DSIGS R + S GDSEVQRTMLELLNQLDGFE K
Sbjct: 232 -----KKNSPSIIFMDEVDSIGSHRKKHVSSTGDSEVQRTMLELLNQLDGFEEHK 281
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/46 (73%), Positives = 42/46 (91%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTL+ARAVA H+ C+FIRVSGSELVQK+IGEG RMVRE+F +A+
Sbjct: 187 TGKTLIARAVAFHSNCSFIRVSGSELVQKYIGEGGRMVREIFSIAK 232
>gi|307106438|gb|EFN54684.1| 26S proteasome AAA-ATPase subunit RPT6a [Chlorella variabilis]
Length = 349
Score = 277 bits (708), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 167/303 (55%), Positives = 193/303 (63%), Gaps = 82/303 (27%)
Query: 76 IKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYV 135
++ G + YY KI+EL++ + +K NL R++AQRNELN++VR+LREELQLLQE GSYV
Sbjct: 8 VQPGHGLRDYYRGKIQELEIAIRDKHHNLHRIEAQRNELNSRVRLLREELQLLQEPGSYV 67
Query: 136 GEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDP 195
GEV+K M K KVLVKV+PEGK+VV D+ + ++ R
Sbjct: 68 GEVIKLMGKSKVLVKVNPEGKYVV------DLGECGAEAQMEAR---------------- 105
Query: 196 LVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPG 255
VIELP+KHPELFDALGIAQPKGVLLYGPPG
Sbjct: 106 ------------------------------VIELPLKHPELFDALGIAQPKGVLLYGPPG 135
Query: 256 TGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFW 315
TGKTLLARAVAHHT+CTFIRVSG ELVQK+IGEGSRMVRELFVMA
Sbjct: 136 TGKTLLARAVAHHTDCTFIRVSGGELVQKYIGEGSRMVRELFVMA--------------- 180
Query: 316 SLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIE-SGSGGDSEVQRTMLELLNQLDGF 374
REHAPSIIFMDE+DSIGS+R + SG GDSEVQRTMLELLNQLDGF
Sbjct: 181 --------------REHAPSIIFMDEVDSIGSARTDNSGGSGDSEVQRTMLELLNQLDGF 226
Query: 375 EAT 377
EAT
Sbjct: 227 EAT 229
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/46 (91%), Positives = 45/46 (97%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+CTFIRVSG ELVQK+IGEGSRMVRELFVMAR
Sbjct: 136 TGKTLLARAVAHHTDCTFIRVSGGELVQKYIGEGSRMVRELFVMAR 181
>gi|159490282|ref|XP_001703109.1| 26S proteasome regulatory subunit [Chlamydomonas reinhardtii]
gi|158270805|gb|EDO96639.1| 26S proteasome regulatory subunit [Chlamydomonas reinhardtii]
Length = 294
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 143/216 (66%), Positives = 158/216 (73%), Gaps = 41/216 (18%)
Query: 78 SSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGE 137
EG K YY KIEEL+L V +K NLRRL+AQRNELN+ VRML+EELQLLQE GSYVGE
Sbjct: 5 GGEGLKGYYRAKIEELELQVKDKTHNLRRLEAQRNELNSHVRMLKEELQLLQEPGSYVGE 64
Query: 138 VVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLV 197
V+K M K KVLVKVHPEGK+VVDIDK
Sbjct: 65 VIKLMGKNKVLVKVHPEGKYVVDIDK---------------------------------- 90
Query: 198 SLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTG 257
VPDSTY+M+GG + QIKEIKEVIELP+KHPELF++LGIAQPKGVLLYGPPGTG
Sbjct: 91 -------VPDSTYDMIGGAEQQIKEIKEVIELPLKHPELFESLGIAQPKGVLLYGPPGTG 143
Query: 258 KTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMV 293
KTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMV
Sbjct: 144 KTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMV 179
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 35/38 (92%), Positives = 38/38 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMV 49
+GKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMV
Sbjct: 142 TGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMV 179
>gi|308160004|gb|EFO62517.1| 26S protease regulatory subunit 8 [Giardia lamblia P15]
Length = 401
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 139/291 (47%), Positives = 190/291 (65%), Gaps = 29/291 (9%)
Query: 85 YYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDK 144
YY ++E Q +V +K Q L + +R+ELN +V+ L+EEL LQE +GEV++P+
Sbjct: 17 YYKARLENTQALVLKKRQELETILFRRSELNNQVKHLKEELATLQEPACDIGEVIRPLPD 76
Query: 145 KKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEK 204
K +K + K +V++ + ++D+ P RVALR+ + ILP VDP +SLM ++K
Sbjct: 77 NKCYIKSSVDDKQIVNVSSKVSMSDLKPGLRVALRSSDSEIVMILPKHVDPAISLMKLDK 136
Query: 205 VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 264
VPD +Y+ +GGL Q+ E++E++ELP+KHPE+F LGI PKGVLLYG PG GK+ +ARA
Sbjct: 137 VPDQSYDDIGGLSKQVLELREILELPIKHPEVFKRLGIPMPKGVLLYGAPGCGKSAVARA 196
Query: 265 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNT 324
VAHH CTFIRVSGSEL+ K+IGEGSRMVR++F MA L N
Sbjct: 197 VAHHCGCTFIRVSGSELLSKYIGEGSRMVRQVFQMA--------------------LKN- 235
Query: 325 IVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
AP+I+F+DE DSIG+ R E GG+SEV RTM ELL+Q+DGFE
Sbjct: 236 --------APAIVFIDECDSIGTKRSEDSHGGESEVNRTMTELLSQVDGFE 278
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 39/44 (88%)
Query: 13 GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
GK+ +ARAVAHH CTFIRVSGSEL+ K+IGEGSRMVR++F MA
Sbjct: 189 GKSAVARAVAHHCGCTFIRVSGSELLSKYIGEGSRMVRQVFQMA 232
>gi|253743444|gb|EES99838.1| 26S protease regulatory subunit 8 [Giardia intestinalis ATCC 50581]
Length = 410
Score = 274 bits (700), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 138/291 (47%), Positives = 189/291 (64%), Gaps = 29/291 (9%)
Query: 85 YYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDK 144
YY ++E Q +V +K Q L + + +ELN +V+ L+EEL LQE +GEV++P+
Sbjct: 26 YYRMRLENTQALVLKKRQELETILFRHSELNNQVKHLKEELATLQEPACDIGEVIRPLPD 85
Query: 145 KKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEK 204
K +K + K +V++ + ++D+ P RVALR+ + ILP VDP +SLM ++K
Sbjct: 86 NKCYIKSSMDDKQIVNVSSKVSMSDLKPGLRVALRSSDSEIVMILPKHVDPAISLMKLDK 145
Query: 205 VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 264
VPD +Y+ +GGL Q+ E++E++ELP+KHPE+F LGI PKGVLLYG PG GK+ +ARA
Sbjct: 146 VPDQSYDDIGGLSKQVLELREILELPIKHPEVFKRLGIPMPKGVLLYGAPGCGKSAVARA 205
Query: 265 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNT 324
VAHH CTFIRVSGSEL+ K+IGEGSRMVR++F MA L N
Sbjct: 206 VAHHCGCTFIRVSGSELLSKYIGEGSRMVRQVFQMA--------------------LKN- 244
Query: 325 IVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
AP+I+F+DE DSIG+ R E GG+SEV RTM ELL+Q+DGFE
Sbjct: 245 --------APAIVFIDECDSIGTKRSEDAHGGESEVNRTMTELLSQVDGFE 287
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 39/44 (88%)
Query: 13 GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
GK+ +ARAVAHH CTFIRVSGSEL+ K+IGEGSRMVR++F MA
Sbjct: 198 GKSAVARAVAHHCGCTFIRVSGSELLSKYIGEGSRMVRQVFQMA 241
>gi|159113065|ref|XP_001706760.1| 26S protease regulatory subunit 8 [Giardia lamblia ATCC 50803]
gi|157434859|gb|EDO79086.1| 26S protease regulatory subunit 8 [Giardia lamblia ATCC 50803]
Length = 401
Score = 274 bits (700), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 138/291 (47%), Positives = 190/291 (65%), Gaps = 29/291 (9%)
Query: 85 YYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDK 144
YY ++E + +V +K Q L + +R+ELN +V+ L+EEL LQE +GEV++P+
Sbjct: 17 YYKARLENTRALVFKKRQELETILFRRSELNNQVKHLKEELATLQEPACDIGEVIRPLPD 76
Query: 145 KKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEK 204
K +K + K +V++ + ++D+ P RVALR+ + ILP VDP +SLM ++K
Sbjct: 77 NKCYIKSSVDDKQIVNVSSKVSMSDLKPGLRVALRSSDSEIVMILPKHVDPAISLMKLDK 136
Query: 205 VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 264
VPD +Y+ +GGL Q+ E++E++ELP+KHPE+F LGI PKGVLLYG PG GK+ +ARA
Sbjct: 137 VPDQSYDDIGGLSKQVLELREILELPIKHPEVFKRLGIPMPKGVLLYGAPGCGKSAVARA 196
Query: 265 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNT 324
VAHH CTFIRVSGSEL+ K+IGEGSRMVR++F MA L N
Sbjct: 197 VAHHCGCTFIRVSGSELLSKYIGEGSRMVRQVFQMA--------------------LKN- 235
Query: 325 IVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
AP+I+F+DE DSIG+ R E GG+SEV RTM ELL+Q+DGFE
Sbjct: 236 --------APAIVFIDECDSIGTKRSEDSHGGESEVNRTMTELLSQVDGFE 278
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 39/44 (88%)
Query: 13 GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
GK+ +ARAVAHH CTFIRVSGSEL+ K+IGEGSRMVR++F MA
Sbjct: 189 GKSAVARAVAHHCGCTFIRVSGSELLSKYIGEGSRMVRQVFQMA 232
>gi|183237345|ref|XP_001914603.1| 26S protease regulatory subunit 8 [Entamoeba histolytica HM-1:IMSS]
gi|169799168|gb|EDS88621.1| 26S protease regulatory subunit 8, putative [Entamoeba histolytica
HM-1:IMSS]
Length = 211
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 131/197 (66%), Positives = 163/197 (82%)
Query: 85 YYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDK 144
YY KI+E+ + QN RRL ++RN+LN +VR ++EELQLL E VGEV++ + K
Sbjct: 15 YYKHKIDEMTYEYCTELQNQRRLISKRNQLNDQVRRMKEELQLLSEPSCSVGEVIRAVGK 74
Query: 145 KKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEK 204
KVLVK EGK+VV ++ IDI + PN RVAL++++Y++ K+LPN+VDPL+SLM VEK
Sbjct: 75 DKVLVKSTQEGKYVVKVEAGIDIRALKPNQRVALKSDTYSICKVLPNQVDPLISLMRVEK 134
Query: 205 VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 264
VPDSTY+M+GGLD QIKEIKEVIELP+KHPELF++LGIAQPKGVLLYGPPGTGKTLLARA
Sbjct: 135 VPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARA 194
Query: 265 VAHHTECTFIRVSGSEL 281
VAHHT+CTFIRVSG+EL
Sbjct: 195 VAHHTDCTFIRVSGTEL 211
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/26 (88%), Positives = 26/26 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSEL 37
+GKTLLARAVAHHT+CTFIRVSG+EL
Sbjct: 186 TGKTLLARAVAHHTDCTFIRVSGTEL 211
>gi|379994200|gb|AFD22727.1| proteasome subunit gamma type 5, partial [Collodictyon triciliatum]
Length = 182
Score = 271 bits (692), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 135/181 (74%), Positives = 151/181 (83%)
Query: 70 MDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQ 129
M + + G + YY K+EEL+L + EK N+RRL+AQRN+ N KVR LREELQLL
Sbjct: 1 MSTEGKAAPAAGIQSYYEGKLEELELKIREKTLNVRRLEAQRNDANTKVRQLREELQLLH 60
Query: 130 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKIL 189
E GSYVGEVVKPM K KVLVKV PEGK+VVD+DK+IDI TPN RVALRN+SYTLHKIL
Sbjct: 61 EPGSYVGEVVKPMGKTKVLVKVQPEGKYVVDLDKSIDIAKCTPNTRVALRNDSYTLHKIL 120
Query: 190 PNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVL 249
PNKVDPLVSLM VEKVPDSTYEMVGGLD QIKEIKEVIELP+KHPELF++LGIAQPKGVL
Sbjct: 121 PNKVDPLVSLMRVEKVPDSTYEMVGGLDKQIKEIKEVIELPIKHPELFESLGIAQPKGVL 180
Query: 250 L 250
L
Sbjct: 181 L 181
>gi|116200303|ref|XP_001225963.1| hypothetical protein CHGG_08307 [Chaetomium globosum CBS 148.51]
gi|88179586|gb|EAQ87054.1| hypothetical protein CHGG_08307 [Chaetomium globosum CBS 148.51]
Length = 269
Score = 269 bits (687), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 136/179 (75%), Positives = 144/179 (80%), Gaps = 29/179 (16%)
Query: 200 MMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKT 259
MMVEKVPDSTY+M+GGLD QIKEIKEVIEL +KHPELF++LGIAQPKGVLLYGPPGTGKT
Sbjct: 1 MMVEKVPDSTYDMIGGLDQQIKEIKEVIELGLKHPELFESLGIAQPKGVLLYGPPGTGKT 60
Query: 260 LLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLT 319
LLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 61 LLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMA------------------- 101
Query: 320 ILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPSIIFMDEIDSIGSSR+E SGGDSEVQRTMLELLNQLDGFE TK
Sbjct: 102 ----------REHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFEPTK 150
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 53/68 (77%), Gaps = 4/68 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMAR S MD
Sbjct: 57 TGKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPS----IIFMD 112
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 113 EIDSIGSS 120
>gi|209737910|gb|ACI69824.1| 26S protease regulatory subunit 8 [Salmo salar]
Length = 210
Score = 262 bits (669), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 149/191 (78%), Positives = 159/191 (83%), Gaps = 3/191 (1%)
Query: 74 EAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGS 133
E K G + YY +KIEELQL V +K QNLRRLQAQRNELNAKVR+LREELQLLQEQGS
Sbjct: 13 EDSKGGSGLRQYYQSKIEELQLTVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGS 72
Query: 134 YVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKV 193
YVGEVV+ MDKKKVLVKVHPEGKFVVD+DKNIDINDVTPNCRVALRN+SYTLHKILPNKV
Sbjct: 73 YVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKV 132
Query: 194 DPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPE-LFDALGIAQPKGVLLYG 252
DPLVSLMMVEKVPDSTYEM+GGLD QIKEIKEVIELPVKHPE L L + P V
Sbjct: 133 DPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPEPLGLKLRVCAPSQVCT-- 190
Query: 253 PPGTGKTLLAR 263
P G G+ R
Sbjct: 191 PSGRGECTSTR 201
>gi|67582656|ref|XP_664935.1| hypothetical protein [Cryptosporidium hominis TU502]
gi|54655117|gb|EAL34705.1| hypothetical protein Chro.60119, partial [Cryptosporidium hominis]
Length = 172
Score = 261 bits (666), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 133/179 (74%), Positives = 143/179 (79%), Gaps = 30/179 (16%)
Query: 200 MMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKT 259
M VEKVPDSTY+MVGGLD QIKEIKEVIELP+KHPE+F++LGIAQPKGVLLYGPPGTGKT
Sbjct: 1 MKVEKVPDSTYDMVGGLDEQIKEIKEVIELPIKHPEIFESLGIAQPKGVLLYGPPGTGKT 60
Query: 260 LLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLT 319
LLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 61 LLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMA------------------- 101
Query: 320 ILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
REHAPS+IFMDEIDSIGS R E G GDSEVQRTMLELLNQLDGFE+T+
Sbjct: 102 ----------REHAPSLIFMDEIDSIGSQRTE-GESGDSEVQRTMLELLNQLDGFESTQ 149
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/46 (93%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMAR
Sbjct: 57 TGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAR 102
>gi|390466625|ref|XP_003733622.1| PREDICTED: LOW QUALITY PROTEIN: 26S protease regulatory subunit
8-like [Callithrix jacchus]
Length = 429
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 164/293 (55%), Positives = 192/293 (65%), Gaps = 55/293 (18%)
Query: 89 KIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVL 148
+++ QLIV +K QNL R Q RNEL AKV EL LLQEQ S V EVV+ MDKKKVL
Sbjct: 37 RLKNSQLIVNDKTQNLWRQQVHRNELKAKVXE---ELXLLQEQNSCVREVVQAMDKKKVL 93
Query: 149 VKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDS 208
++VHP+ KFV+D+DKN I+DVTP+ V LRN+SYTL+KILPNKVDPLVS+MMV+KVPDS
Sbjct: 94 IQVHPKDKFVIDVDKNTSISDVTPSSWVVLRNDSYTLYKILPNKVDPLVSMMMVKKVPDS 153
Query: 209 TYEMVGG-LDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAH 267
TYEM+GG LD QIKEIKEVIELP KHP+LF ALGIAQPKGVLL KTLLA A+AH
Sbjct: 154 TYEMIGGLLDRQIKEIKEVIELPDKHPQLFKALGIAQPKGVLLX------KTLLAWALAH 207
Query: 268 HTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVC 327
H + TFI VSGSEL QKFIGE F++ K
Sbjct: 208 HKDQTFIHVSGSELGQKFIGE--------FLLXQRK------------------------ 235
Query: 328 NFREHAPSIIFMDEIDSIGSSRIE--SGSGGDSEVQRTMLELLNQLDGFEATK 378
S++FMDEI IGSS++E + GG + R E DGFEATK
Sbjct: 236 -----CSSVVFMDEI-FIGSSQLEGIATGGGTMKCSRRCFE-----DGFEATK 277
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 29/39 (74%)
Query: 6 HPTWIVSGKTLLARAVAHHTECTFIRVSGSELVQKFIGE 44
P ++ KTLLA A+AHH + TFI VSGSEL QKFIGE
Sbjct: 190 QPKGVLLXKTLLAWALAHHKDQTFIHVSGSELGQKFIGE 228
>gi|330040472|ref|XP_003239927.1| 26S proteasome SU [Cryptomonas paramecium]
gi|327206853|gb|AEA39029.1| 26S proteasome SU [Cryptomonas paramecium]
Length = 403
Score = 256 bits (655), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 131/297 (44%), Positives = 193/297 (64%), Gaps = 32/297 (10%)
Query: 85 YYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDK 144
+++ + + I+ + ++ + + LN + +L+ E LQ++G Y+ +++K + K
Sbjct: 13 FFINRFLRTKKIICNLKYGIKTINNREFLLNRYINLLQGEFFSLQKEGLYIADIIKRIKK 72
Query: 145 KKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEK 204
LVK + +GK V++ + + N R+ LRN ++++++IL + + L L+ VEK
Sbjct: 73 NIFLVKTNTDGKLVINFSNDTKKIICSENSRIVLRNHNHSVYRILDSIKNSLSYLIHVEK 132
Query: 205 --VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 262
STY+ +GGLD QI+++KEVIELP+K PE+F+ LG+ QPKGVL+YGPPGTGKTLLA
Sbjct: 133 NKTVTSTYKEIGGLDFQIEQLKEVIELPIKFPEMFEILGVCQPKGVLMYGPPGTGKTLLA 192
Query: 263 RAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILT 322
RAVA+H CTFI+VS SELVQK+IGEG +M+R +F MA
Sbjct: 193 RAVAYHANCTFIKVSSSELVQKYIGEGGKMIRNIFKMA---------------------- 230
Query: 323 NTIVCNFREHAPSIIFMDEIDSIGSSRIESGS-GGDSEVQRTMLELLNQLDGFEATK 378
++++PSI+F+DE+DSIGSSRI + S GGD EVQRTMLELLNQLDGFE+ K
Sbjct: 231 -------KDYSPSIVFIDEVDSIGSSRISNDSTGGDLEVQRTMLELLNQLDGFESEK 280
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/46 (69%), Positives = 40/46 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA+H CTFI+VS SELVQK+IGEG +M+R +F MA+
Sbjct: 186 TGKTLLARAVAYHANCTFIKVSSSELVQKYIGEGGKMIRNIFKMAK 231
>gi|194707936|gb|ACF88052.1| unknown [Zea mays]
gi|413926164|gb|AFW66096.1| hypothetical protein ZEAMMB73_419750 [Zea mays]
Length = 204
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 124/170 (72%), Positives = 146/170 (85%)
Query: 82 FKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKP 141
+ YY+ I +LQL + +K NL RL+AQRN+LN++VRMLREELQLLQE GSYVGEVVK
Sbjct: 35 LRQYYLQHIHDLQLQIRQKTHNLNRLEAQRNDLNSRVRMLREELQLLQEPGSYVGEVVKV 94
Query: 142 MDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMM 201
M K KVLVKVHPEGK+VVDIDK+IDI +TP+ RVALRN+SY LH ILP+KVDPLV+LM
Sbjct: 95 MGKSKVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYMLHLILPSKVDPLVNLMK 154
Query: 202 VEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLY 251
VEKVPDSTY+M+GGLD QIKEIKEVIELP+KHPELF++LGIAQPK L+
Sbjct: 155 VEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKVCFLF 204
>gi|150401457|ref|YP_001325223.1| proteasome-activating nucleotidase [Methanococcus aeolicus
Nankai-3]
gi|150014160|gb|ABR56611.1| 26S proteasome subunit P45 family [Methanococcus aeolicus Nankai-3]
Length = 408
Score = 244 bits (624), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 129/289 (44%), Positives = 185/289 (64%), Gaps = 29/289 (10%)
Query: 88 TKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKV 147
KI EL+ + + R L ELN +V +LR EL+ L+ +G V + K+K
Sbjct: 26 AKIAELESTILRMDLEKRGLLKANEELNKEVEVLRRELEKLRVPPLIIGTVTDKVGKEKA 85
Query: 148 LVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPD 207
+VK F+V I K ID N++ P R+ L ++ ++ +ILPN+ D M +E+ PD
Sbjct: 86 VVKSSTGPSFLVSISKFIDSNEIVPGTRICLNQQTLSVVEILPNEKDYRALAMEIEEKPD 145
Query: 208 STYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAH 267
T++ +GGLD QIKE+KEV+ELP+ HPELF+ +GI PKGVLLYGPPGTGKTLLA+AVA+
Sbjct: 146 ITFDKIGGLDKQIKEVKEVVELPLTHPELFEKVGIEPPKGVLLYGPPGTGKTLLAKAVAN 205
Query: 268 HTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVC 327
T +FI++ GSELV+KFIGEG+++V+++F +A
Sbjct: 206 ETNASFIKLVGSELVKKFIGEGAKLVKDVFKLA--------------------------- 238
Query: 328 NFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
RE+AP+IIF+DEID++ S R ES +GGD EVQRT+++LL ++DGFE+
Sbjct: 239 --RENAPTIIFIDEIDAVASKRTESLTGGDREVQRTLMQLLAEMDGFES 285
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 41/46 (89%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLA+AVA+ T +FI++ GSELV+KFIGEG+++V+++F +AR
Sbjct: 194 TGKTLLAKAVANETNASFIKLVGSELVKKFIGEGAKLVKDVFKLAR 239
>gi|213511834|ref|NP_001134720.1| 26S protease regulatory subunit 8 [Salmo salar]
gi|209735444|gb|ACI68591.1| 26S protease regulatory subunit 8 [Salmo salar]
Length = 274
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 132/156 (84%), Positives = 142/156 (91%)
Query: 74 EAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGS 133
E K G + YY +KIEELQL V +K QNLRRLQAQRNELNAKVR+LREELQLLQEQGS
Sbjct: 13 EDSKGGSGLRQYYQSKIEELQLTVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGS 72
Query: 134 YVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKV 193
YVGEVV+ MDKKKVLVKVHPEGKFVVD+ KNIDINDVTPNCRVALRN+SYTLHKILPNKV
Sbjct: 73 YVGEVVRAMDKKKVLVKVHPEGKFVVDVGKNIDINDVTPNCRVALRNDSYTLHKILPNKV 132
Query: 194 DPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIEL 229
DPLVSLMMVEKVPDSTYEM+GGLD QIKEIKEVI++
Sbjct: 133 DPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIDI 168
>gi|296109413|ref|YP_003616362.1| 26S proteasome subunit P45 family [methanocaldococcus infernus ME]
gi|295434227|gb|ADG13398.1| 26S proteasome subunit P45 family [Methanocaldococcus infernus ME]
Length = 421
Score = 237 bits (604), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 127/288 (44%), Positives = 183/288 (63%), Gaps = 29/288 (10%)
Query: 88 TKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKV 147
KI EL+ + + E R L+ + +L+ +V +LR EL ++ VG +V + ++K
Sbjct: 40 AKIAELESKILKLEIEKRELERENIQLSKEVEILRRELDRMRVPPLLVGTIVDKIGERKA 99
Query: 148 LVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPD 207
+VK F+V+I ++ +D+TP RVAL ++ T+ +LP D M +E+ P+
Sbjct: 100 IVKSSSGPSFLVNISHFVNPDDLTPGTRVALNQQTLTIVDVLPETKDYRAKAMEIEERPN 159
Query: 208 STYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAH 267
YE +GGLD QI+EI+EV+ELP+KHPELF+ +GI PKGVLLYGPPGTGKTLLA+AVA
Sbjct: 160 VRYEDIGGLDKQIQEIREVVELPLKHPELFEKIGIEPPKGVLLYGPPGTGKTLLAKAVAR 219
Query: 268 HTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVC 327
T TFIRV GSELV+KFIGEG+ +V+++F +A
Sbjct: 220 ETNATFIRVVGSELVKKFIGEGASLVKDIFKLA--------------------------- 252
Query: 328 NFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
+E APSIIF+DEID+I + R E+ +GGD EVQRT+++LL ++DGF+
Sbjct: 253 --KEKAPSIIFIDEIDAIAAKRTEALTGGDREVQRTLMQLLAEMDGFD 298
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 41/51 (80%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
+GKTLLA+AVA T TFIRV GSELV+KFIGEG+ +V+++F +A+ K S
Sbjct: 208 TGKTLLAKAVARETNATFIRVVGSELVKKFIGEGASLVKDIFKLAKEKAPS 258
>gi|116753771|ref|YP_842889.1| proteasome-activating nucleotidase [Methanosaeta thermophila PT]
gi|116665222|gb|ABK14249.1| Proteasome-activating nucleotidase [Methanosaeta thermophila PT]
Length = 404
Score = 235 bits (600), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 130/306 (42%), Positives = 192/306 (62%), Gaps = 37/306 (12%)
Query: 77 KSSEGFKPYYVTK---IEELQLIVAEK----EQNLRRLQAQRNELNAKVRMLREELQLLQ 129
+S F Y + + +EE L + E+ E R ++ Q+ + + R LR EL+ L+
Sbjct: 5 QSGPDFSKYILDRMKQLEERNLALREQKDRAEGEKRLIENQKLKYEREARKLRSELERLR 64
Query: 130 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKIL 189
VG VV+ +D+ +V+VK + VV + + I+ ++ P +V L +++ + +L
Sbjct: 65 VGPMIVGTVVEVLDESRVIVKSSTGPRLVVSVSQFIE-EELRPGVQVGLNQQTFAVMCVL 123
Query: 190 PNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVL 249
P+ DP+V M VE+VPD T+ +GGLD+QI E++E++ELP+K PELF A+GI PKGVL
Sbjct: 124 PSPRDPMVFGMEVEEVPDVTFASIGGLDSQIAELREIVELPLKRPELFHAVGIEPPKGVL 183
Query: 250 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAH 309
LYGPPGTGKTLLA+AVA+ TE TF+RV GSE VQK+IGEG+R+VRELF +A
Sbjct: 184 LYGPPGTGKTLLAKAVANSTEATFLRVVGSEFVQKYIGEGARLVRELFDLA--------- 234
Query: 310 HPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN 369
+ AP+IIF+DE+D+IGS RI+ + GD EVQRT+++LL
Sbjct: 235 --------------------KSRAPAIIFIDELDAIGSRRIDGATSGDREVQRTLMQLLA 274
Query: 370 QLDGFE 375
++DGF+
Sbjct: 275 EMDGFD 280
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 49/67 (73%), Gaps = 4/67 (5%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLA+AVA+ TE TF+RV GSE VQK+IGEG+R+VRELF +A+ SR +D
Sbjct: 190 TGKTLLAKAVANSTEATFLRVVGSEFVQKYIGEGARLVRELFDLAK----SRAPAIIFID 245
Query: 72 VDEAIKS 78
+AI S
Sbjct: 246 ELDAIGS 252
>gi|312136744|ref|YP_004004081.1| proteasome-activating nucleotidase [Methanothermus fervidus DSM
2088]
gi|311224463|gb|ADP77319.1| Proteasome-activating nucleotidase [Methanothermus fervidus DSM
2088]
Length = 410
Score = 234 bits (598), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 119/270 (44%), Positives = 174/270 (64%), Gaps = 29/270 (10%)
Query: 107 LQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNID 166
++ ++ L+ +VR LR E++ L+ +G V + +D ++V VK FVV+ KN+D
Sbjct: 47 IENEKMRLDREVRSLRSEIERLRTPPLVIGTVTEILDDERVAVKSSTGPYFVVNRPKNLD 106
Query: 167 INDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEV 226
+ P RVAL +++ + +LP++ DP V M VEK P+ Y+ +GGL QI+E++E
Sbjct: 107 GKKIEPGTRVALNQQTFNIVDVLPSEKDPAVVGMEVEKRPEVGYDQIGGLKKQIREVRET 166
Query: 227 IELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFI 286
+ELP+K PELF+ +GI PKGVLLYGPPGTGKTLLA+AVAH T TFI+V SE V+K+I
Sbjct: 167 VELPLKKPELFEKVGIEPPKGVLLYGPPGTGKTLLAKAVAHETNATFIKVVASEFVRKYI 226
Query: 287 GEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIG 346
GEG+R+VRE+F +A +E +PSIIF+DEID++
Sbjct: 227 GEGARLVREVFELA-----------------------------KEKSPSIIFIDEIDAVA 257
Query: 347 SSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
+ R+ S + GD EVQRT+++LL +LDGFE+
Sbjct: 258 ARRLRSSTSGDREVQRTLMQLLAELDGFES 287
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 41/51 (80%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
+GKTLLA+AVAH T TFI+V SE V+K+IGEG+R+VRE+F +A+ K S
Sbjct: 196 TGKTLLAKAVAHETNATFIKVVASEFVRKYIGEGARLVREVFELAKEKSPS 246
>gi|268323400|emb|CBH36988.1| proteasome-activating nucleotidase [uncultured archaeon]
Length = 410
Score = 234 bits (596), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 129/314 (41%), Positives = 192/314 (61%), Gaps = 43/314 (13%)
Query: 76 IKSSEGFKP-------YYVTKIEELQLI-------VAEKEQNLRRLQAQRNELNAKVRML 121
+K+S G P + + +I++L+ + +A+ E+ R +A R + +VR L
Sbjct: 1 MKASSGSAPVGDEYSRFLLDRIKQLEEVNYGLKGQLAQIEEGGRDYEAMRMQYEREVRKL 60
Query: 122 REELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNE 181
R EL+ L+ +G VV+ +D K+++VK KFVV+ + ID +V P +V + +
Sbjct: 61 RSELEKLRASPLIIGTVVEVIDNKRMVVKSSTGPKFVVNYSQFIDTKEVVPGAQVGMNQQ 120
Query: 182 SYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALG 241
S + +LP+ DP V M V + PD YE++GGL+ QI+EI+EV+ELP+ P++F+ +G
Sbjct: 121 SLAVVSVLPSAKDPAVYGMEVIESPDVGYEIIGGLNKQIEEIREVVELPLTKPKMFERIG 180
Query: 242 IAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAS 301
+ PKGVLL G PGTGKTLLA++ A+ T TFIRV GSELVQK+IGEG+RMVRELF +A
Sbjct: 181 VEPPKGVLLVGAPGTGKTLLAKSAANRTAATFIRVVGSELVQKYIGEGARMVRELFELAE 240
Query: 302 LKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQ 361
E APSI+F+DEID+I + R+E G+ G+ EVQ
Sbjct: 241 -----------------------------EKAPSIVFIDEIDAIAARRLEDGTTGEREVQ 271
Query: 362 RTMLELLNQLDGFE 375
RTM++LL ++DGF+
Sbjct: 272 RTMMQLLAEIDGFD 285
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 41/51 (80%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
+GKTLLA++ A+ T TFIRV GSELVQK+IGEG+RMVRELF +A K S
Sbjct: 195 TGKTLLAKSAANRTAATFIRVVGSELVQKYIGEGARMVRELFELAEEKAPS 245
>gi|383319993|ref|YP_005380834.1| proteasome-activating nucleotidase [Methanocella conradii HZ254]
gi|379321363|gb|AFD00316.1| Proteasome-activating nucleotidase [Methanocella conradii HZ254]
Length = 412
Score = 234 bits (596), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 132/313 (42%), Positives = 194/313 (61%), Gaps = 37/313 (11%)
Query: 70 MDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNEL-NAKVRMLRE----- 123
+D+ E + S+ F Y + ++ +L+ ++ R+++ ++ + N KV+ RE
Sbjct: 7 IDIHEDVPMSD-FSKYLLDRVRQLEERNVRLKEEYRKIELEKKSVENKKVQYERENRKLT 65
Query: 124 -ELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNES 182
EL L+ VG V+ + K+++K KFVV+ + I+ D+ P +VAL +S
Sbjct: 66 AELDRLKTPPLLVGTVIDILANNKLVIKSSSGPKFVVNSSQFINSKDIYPGAKVALNQQS 125
Query: 183 YTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGI 242
+ ++LP DP+V M V + PD Y+ +GGL+ QIKEIKE +ELP+ PELF+ +GI
Sbjct: 126 LAVIEVLPPVKDPMVLGMEVIEAPDIDYDSIGGLEEQIKEIKETVELPLLKPELFERVGI 185
Query: 243 AQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASL 302
PKGVLLYGPPGTGKTLLA+AVAH T+ +FIR+ GSELVQK+IGEG+RMVRELF +A
Sbjct: 186 QPPKGVLLYGPPGTGKTLLAKAVAHSTKASFIRIIGSELVQKYIGEGARMVRELFELA-- 243
Query: 303 KKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQR 362
+E +PSIIF+DEIDSIG+ R++S + GD EVQR
Sbjct: 244 ---------------------------KEKSPSIIFIDEIDSIGAKRLDSITSGDREVQR 276
Query: 363 TMLELLNQLDGFE 375
T+++LL ++DGF+
Sbjct: 277 TLVQLLAEMDGFD 289
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/51 (68%), Positives = 44/51 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
+GKTLLA+AVAH T+ +FIR+ GSELVQK+IGEG+RMVRELF +A+ K S
Sbjct: 199 TGKTLLAKAVAHSTKASFIRIIGSELVQKYIGEGARMVRELFELAKEKSPS 249
>gi|20094314|ref|NP_614161.1| proteasome-activating nucleotidase [Methanopyrus kandleri AV19]
gi|22096006|sp|Q8TX03.1|PAN_METKA RecName: Full=Proteasome-activating nucleotidase; Short=PAN;
AltName: Full=Proteasomal ATPase; AltName:
Full=Proteasome regulatory ATPase; AltName:
Full=Proteasome regulatory particle
gi|19887363|gb|AAM02091.1| ATP-dependent 26S proteasome regulatory subunit [Methanopyrus
kandleri AV19]
Length = 436
Score = 233 bits (594), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 128/292 (43%), Positives = 181/292 (61%), Gaps = 34/292 (11%)
Query: 89 KIEELQLIVAEKEQNLRRLQAQ--RNELNAK---VRMLREELQLLQEQGSYVGEVVKPMD 143
+IE + EKE + R + R EL K + LR +LQ +++ VG V + +D
Sbjct: 52 RIEARRRKTLEKELEMERDEKAELREELRRKEVMIEKLRSDLQRMKKPPLIVGTVEEILD 111
Query: 144 KKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVE 203
+V+VK KFV ++ +D N++ P VAL +S + +LP++ D V M V+
Sbjct: 112 DGRVIVKSSTGPKFVSNVSPTVDRNELEPGANVALNQQSMAVVDVLPSEKDSRVLAMEVD 171
Query: 204 KVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLAR 263
+ PD +Y+ +GGLD QI+EI+EV+E P+K PELF+ +G+ PKGVLLYGPPGTGKTLLA+
Sbjct: 172 ESPDVSYDDIGGLDEQIREIREVVEKPLKEPELFEKVGVEPPKGVLLYGPPGTGKTLLAK 231
Query: 264 AVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTN 323
AVA+H + TFIR++ ELVQKFIGEG+R+VRELF +A
Sbjct: 232 AVANHADATFIRLAAPELVQKFIGEGARLVRELFELA----------------------- 268
Query: 324 TIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
RE APSIIF+DEID+IG+ R+ + GD EVQRT+ +LL ++DGF+
Sbjct: 269 ------REKAPSIIFIDEIDAIGARRMRDATSGDREVQRTLTQLLAEMDGFD 314
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 43/51 (84%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
+GKTLLA+AVA+H + TFIR++ ELVQKFIGEG+R+VRELF +AR K S
Sbjct: 224 TGKTLLAKAVANHADATFIRLAAPELVQKFIGEGARLVRELFELAREKAPS 274
>gi|282163672|ref|YP_003356057.1| proteasome-activating nucleotidase [Methanocella paludicola SANAE]
gi|282155986|dbj|BAI61074.1| proteasome-activating nucleotidase [Methanocella paludicola SANAE]
Length = 412
Score = 233 bits (594), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 132/313 (42%), Positives = 194/313 (61%), Gaps = 37/313 (11%)
Query: 70 MDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNEL-NAKVRMLRE----- 123
+D+ E + S+ F Y + ++ +L+ ++ R+++ ++ + N KV+ RE
Sbjct: 7 VDIQEDVPVSD-FSKYLLDRVRQLEERNVRLKEEYRKIELEKKSVENKKVQYERENRKLT 65
Query: 124 -ELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNES 182
EL L+ VG VV M K+++K KFVV+ + I+ D+ P +VAL +S
Sbjct: 66 AELDRLKTPPLLVGTVVDVMANNKLVIKSSSGPKFVVNSSQFINSKDIFPGAKVALNQQS 125
Query: 183 YTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGI 242
+ ++LP DP+V M V + P+ Y+ +GGL++QI EIKE +ELP+ PELF+ +GI
Sbjct: 126 LAVIEVLPPVKDPMVLGMEVIEAPNIDYQNIGGLEDQINEIKETVELPLLKPELFEKVGI 185
Query: 243 AQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASL 302
PKGVLLYGPPGTGKTLLA+AVAH T+ +FIR+ GSELVQK+IGEG+RMVRELF +A
Sbjct: 186 QPPKGVLLYGPPGTGKTLLAKAVAHSTKASFIRIIGSELVQKYIGEGARMVRELFELA-- 243
Query: 303 KKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQR 362
+E +PSIIF+DEIDSIG+ R++S + GD EVQR
Sbjct: 244 ---------------------------KEKSPSIIFIDEIDSIGAKRLDSITSGDREVQR 276
Query: 363 TMLELLNQLDGFE 375
T+++LL ++DGF+
Sbjct: 277 TLVQLLAEMDGFD 289
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/51 (68%), Positives = 44/51 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
+GKTLLA+AVAH T+ +FIR+ GSELVQK+IGEG+RMVRELF +A+ K S
Sbjct: 199 TGKTLLAKAVAHSTKASFIRIIGSELVQKYIGEGARMVRELFELAKEKSPS 249
>gi|444706545|gb|ELW47882.1| 26S protease regulatory subunit 8 [Tupaia chinensis]
Length = 173
Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 138/193 (71%), Positives = 154/193 (79%), Gaps = 28/193 (14%)
Query: 70 MDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQ 129
M+++E K+ G YY++KIEELQLIV +K QNLR+ RNELNAKVR+LREELQLLQ
Sbjct: 9 MELEEG-KAGSGLCQYYLSKIEELQLIVNDKSQNLRK----RNELNAKVRLLREELQLLQ 63
Query: 130 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKIL 189
EQGS+VGEVV+ MDK+KVLVKVHPEGK N+SYTLHKIL
Sbjct: 64 EQGSFVGEVVQAMDKRKVLVKVHPEGK-----------------------NDSYTLHKIL 100
Query: 190 PNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVL 249
PNKVDPLVSLMMVEKVPDS YEM+GGLD QIK+IKEVIELPVKHPELF+ALGIAQPKGVL
Sbjct: 101 PNKVDPLVSLMMVEKVPDSNYEMIGGLDKQIKKIKEVIELPVKHPELFEALGIAQPKGVL 160
Query: 250 LYGPPGTGKTLLA 262
LYGPPGTGKTLLA
Sbjct: 161 LYGPPGTGKTLLA 173
>gi|15678755|ref|NP_275871.1| proteasome-activating nucleotidase [Methanothermobacter
thermautotrophicus str. Delta H]
gi|3122631|sp|O26824.1|PAN_METTH RecName: Full=Proteasome-activating nucleotidase; Short=PAN;
AltName: Full=Proteasomal ATPase; AltName:
Full=Proteasome regulatory ATPase; AltName:
Full=Proteasome regulatory particle
gi|2621817|gb|AAB85233.1| ATP-dependent 26S protease regulatory subunit 4
[Methanothermobacter thermautotrophicus str. Delta H]
Length = 410
Score = 231 bits (590), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 114/270 (42%), Positives = 175/270 (64%), Gaps = 29/270 (10%)
Query: 107 LQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNID 166
++ +R L+ +V+ LR E++ + + V + +D +V VK FV++ + ID
Sbjct: 47 IENERTRLDREVKSLRGEIERFRTPPLVIATVTEVLDDHRVAVKSTTGPHFVINYSRFID 106
Query: 167 INDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEV 226
+ P RVAL +++++ +LP++ DP+V+ M VE+ PD +YE +GGL+ Q++E+KE
Sbjct: 107 RKQLEPGARVALNQQTFSIVDVLPSEKDPVVTGMEVEEKPDVSYEQIGGLEEQVREVKET 166
Query: 227 IELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFI 286
+ELP+K PELF+ +GI PKGVLLYGPPGTGKTLLA+AVAH T TFI++ SE V+K+I
Sbjct: 167 VELPLKKPELFEKIGIEPPKGVLLYGPPGTGKTLLAKAVAHETNATFIKIVASEFVRKYI 226
Query: 287 GEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIG 346
GEG+R+VR +F +A +E +PSIIF+DEID++
Sbjct: 227 GEGARLVRGVFELA-----------------------------KEKSPSIIFIDEIDAVA 257
Query: 347 SSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
+ R++S + GD EVQRT+++LL +LDGFE+
Sbjct: 258 AKRLKSSTSGDREVQRTLMQLLAELDGFES 287
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 40/51 (78%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
+GKTLLA+AVAH T TFI++ SE V+K+IGEG+R+VR +F +A+ K S
Sbjct: 196 TGKTLLAKAVAHETNATFIKIVASEFVRKYIGEGARLVRGVFELAKEKSPS 246
>gi|304314884|ref|YP_003850031.1| proteasome-activating nucleotidase [Methanothermobacter
marburgensis str. Marburg]
gi|302588343|gb|ADL58718.1| predicted proteasome-activating nucleotidase [Methanothermobacter
marburgensis str. Marburg]
Length = 410
Score = 231 bits (589), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 113/270 (41%), Positives = 175/270 (64%), Gaps = 29/270 (10%)
Query: 107 LQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNID 166
++ ++ L+ +V+ LR E++ + + + + +D +V VK FV++ + ID
Sbjct: 47 IENEKTRLDREVKSLRGEIERFRTPPLVIATITEVLDDHRVAVKSSTGPHFVINYSRFID 106
Query: 167 INDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEV 226
+ P RVAL +++++ +LP++ DP+V+ M VE+ PD +YE +GGL+ Q++E+KE
Sbjct: 107 KKQLEPGARVALNQQTFSIVDVLPSEKDPVVTGMEVEEKPDVSYEQIGGLEEQVREVKET 166
Query: 227 IELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFI 286
+ELP+K PELF+ +GI PKGVLLYGPPGTGKTLLA+AVAH T TFI++ SE V+K+I
Sbjct: 167 VELPLKKPELFEKIGIEPPKGVLLYGPPGTGKTLLAKAVAHETNATFIKIVASEFVRKYI 226
Query: 287 GEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIG 346
GEG+R+VR +F +A +E APSIIF+DEID++
Sbjct: 227 GEGARLVRGVFELA-----------------------------KEKAPSIIFIDEIDAVA 257
Query: 347 SSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
+ R++S + GD EVQRT+++LL +LDGFE+
Sbjct: 258 AKRLKSSTSGDREVQRTLMQLLAELDGFES 287
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 40/51 (78%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
+GKTLLA+AVAH T TFI++ SE V+K+IGEG+R+VR +F +A+ K S
Sbjct: 196 TGKTLLAKAVAHETNATFIKIVASEFVRKYIGEGARLVRGVFELAKEKAPS 246
>gi|432115825|gb|ELK36973.1| 26S protease regulatory subunit 4 [Myotis davidii]
Length = 498
Score = 231 bits (589), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 132/321 (41%), Positives = 189/321 (58%), Gaps = 37/321 (11%)
Query: 63 RGTEFFTMDVDEAIKSSEGFKPYYVTKIEELQLIVAEK-------EQNLRRLQAQRNELN 115
R ++ M+ +E I++ E KP + L+L+ E+ E+ R Q Q L
Sbjct: 89 RIKDYLLME-EEFIRNQEQMKPLEEKQECRLKLLKLERIKDYLLMEEEFIRNQEQMKPLE 147
Query: 116 AKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCR 175
K R ++ L+ VG + + +D +V + V I +D + + P C
Sbjct: 148 EKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCS 207
Query: 176 VALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPE 235
V L ++ + + +L + DPLV++M VEK P TY +GGLDNQI+EIKE +ELP+ HPE
Sbjct: 208 VLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPE 267
Query: 236 LFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRE 295
++ +GI PKGV+LYGPPGTGKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRE
Sbjct: 268 YYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRE 327
Query: 296 LFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSG 355
LF +A EHAPSI+F+DEID+IG+ R +S SG
Sbjct: 328 LFRVAE-----------------------------EHAPSIVFIDEIDAIGTKRYDSNSG 358
Query: 356 GDSEVQRTMLELLNQLDGFEA 376
G+ E+QRTMLELLNQLDGF++
Sbjct: 359 GEREIQRTMLELLNQLDGFDS 379
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 288 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 332
>gi|395645670|ref|ZP_10433530.1| Proteasome-activating nucleotidase [Methanofollis liminatans DSM
4140]
gi|395442410|gb|EJG07167.1| Proteasome-activating nucleotidase [Methanofollis liminatans DSM
4140]
Length = 412
Score = 231 bits (588), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 125/307 (40%), Positives = 185/307 (60%), Gaps = 36/307 (11%)
Query: 77 KSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAK-------VRMLREELQLLQ 129
++SE Y + +I L+ E + +R++++++ + + +R LR E++ L+
Sbjct: 12 QNSEELCKYLLERISNLENRNLELRERMRQMESEKRYVETQKIRYEREMRKLRSEIEQLR 71
Query: 130 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKIL 189
VGE++ +D +V+V+ +F+V + + ID D+ R L +S L ++L
Sbjct: 72 SPPLVVGEIIDIIDNNRVVVRSSAGPRFLVRVSQFIDPKDLRSGSRCTLNQQSLALIEVL 131
Query: 190 PNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVL 249
PN DP + M +E+ P Y +GGL+ Q++E+KE +ELP+ P LF+ +GI PKGVL
Sbjct: 132 PNNYDPQIYGMELEERPGEIYSDIGGLEAQVQELKEAVELPLTKPHLFEQVGIRPPKGVL 191
Query: 250 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAH 309
LYGPPGTGKTLLARAVAH T F+RV GSELVQK+IGEG+R+VRELF +A
Sbjct: 192 LYGPPGTGKTLLARAVAHETNAHFLRVVGSELVQKYIGEGARLVRELFEIA--------- 242
Query: 310 HPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN 369
RE AP+IIF+DEID++G+ R ES + GD EVQRT+++LL
Sbjct: 243 --------------------REKAPAIIFIDEIDAVGAHRTESVTSGDREVQRTLMQLLA 282
Query: 370 QLDGFEA 376
+DGFEA
Sbjct: 283 GMDGFEA 289
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/51 (68%), Positives = 42/51 (82%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
+GKTLLARAVAH T F+RV GSELVQK+IGEG+R+VRELF +AR K +
Sbjct: 198 TGKTLLARAVAHETNAHFLRVVGSELVQKYIGEGARLVRELFEIAREKAPA 248
>gi|386001528|ref|YP_005919827.1| proteasome-activating nucleotidase [Methanosaeta harundinacea 6Ac]
gi|357209584|gb|AET64204.1| Proteasome-activating nucleotidase [Methanosaeta harundinacea 6Ac]
Length = 406
Score = 229 bits (585), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 125/291 (42%), Positives = 183/291 (62%), Gaps = 34/291 (11%)
Query: 89 KIEELQLIVAEKEQNL----RRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDK 144
++EE L + E++ + R ++ Q+ + +VR LR EL+ L+ VG + +D
Sbjct: 20 QLEERNLALREQKDRVEGEKRIMENQKLKFEREVRKLRSELERLRTGPLIVGTIQDVLDD 79
Query: 145 KKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEK 204
+V+VK +FVV++ + I+ ++ P RVAL +S+++ +LP+ DP V M +E
Sbjct: 80 NRVVVKSSTGPRFVVNVSQFIE-GELRPGTRVALNQQSFSVMFVLPSSRDPAVFGMEIED 138
Query: 205 VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 264
P + +GGL +QI EI+E++ELP+K P+LF +GI PKGVLLYGPPGTGKTLLA+A
Sbjct: 139 APAVDFSQIGGLGDQISEIREIVELPMKRPDLFVKVGIEPPKGVLLYGPPGTGKTLLAKA 198
Query: 265 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNT 324
VA TE TF+RV GSELVQK+IGEG+RMVRELF +A K
Sbjct: 199 VASSTEATFLRVVGSELVQKYIGEGARMVRELFELAQNK--------------------- 237
Query: 325 IVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
AP+IIF+DE+D+IGS R++ + GD EVQRT+++LL ++DGF+
Sbjct: 238 --------APAIIFVDELDAIGSRRMDGATSGDREVQRTLMQLLAEMDGFD 280
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/51 (68%), Positives = 43/51 (84%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
+GKTLLA+AVA TE TF+RV GSELVQK+IGEG+RMVRELF +A+ K +
Sbjct: 190 TGKTLLAKAVASSTEATFLRVVGSELVQKYIGEGARMVRELFELAQNKAPA 240
>gi|16741033|gb|AAH16368.1| Proteasome (prosome, macropain) 26S subunit, ATPase, 1 [Homo
sapiens]
Length = 440
Score = 229 bits (585), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 122/276 (44%), Positives = 170/276 (61%), Gaps = 29/276 (10%)
Query: 101 EQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVD 160
E+ R Q Q L K R ++ L+ VG + + +D + +V + V
Sbjct: 75 EEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNRAIVSTSVGSEHYVS 134
Query: 161 IDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQI 220
I +D + + P C V L ++ + + +L + DPLV++M VEK P TY +GGLDNQI
Sbjct: 135 ILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQI 194
Query: 221 KEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSE 280
+EIKE +ELP+ HPE ++ +GI PKGV+LYGPPGTGKTLLA+AVA+ T TF+RV GSE
Sbjct: 195 QEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSE 254
Query: 281 LVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMD 340
L+QK++G+G ++VRELF +A EHAPSI+F+D
Sbjct: 255 LIQKYLGDGPKLVRELFRVAE-----------------------------EHAPSIVFID 285
Query: 341 EIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
EID+IG+ R +S SGG+ E+QRTMLELLNQLDGF++
Sbjct: 286 EIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDS 321
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 230 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 274
>gi|425873543|gb|AFY06993.1| 26S protease regulatory subunit 7 [Apostichopus japonicus]
Length = 434
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 137/319 (42%), Positives = 181/319 (56%), Gaps = 53/319 (16%)
Query: 73 DEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNEL-----------NAKVRML 121
D A+ S G PY + + E E +++ + + NEL N + L
Sbjct: 30 DIALLKSYGAGPYSSS--------IKEAETDIQNVFKRVNELTGIKESDTGLANPALWDL 81
Query: 122 REELQ-LLQEQGSYVGEVVKPM----DKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRV 176
+ + Q L QEQ V K + D K ++ V KFVVD+ + D+ RV
Sbjct: 82 QADKQALTQEQPLQVARCTKILNADTDDAKYIINVKQFAKFVVDLHDTVAPTDIEEGMRV 141
Query: 177 ALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPEL 236
+ Y +H LP K+DP V++M VE+ PD TY +GG QI++++EV+E P+ HPE
Sbjct: 142 GVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIEKLREVVETPLLHPER 201
Query: 237 FDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVREL 296
F +LGI PKGVLLYGPPGTGKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVREL
Sbjct: 202 FVSLGIEPPKGVLLYGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVREL 261
Query: 297 FVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGG 356
F MA KK C +IF DEID+IG +R + G+GG
Sbjct: 262 FEMARSKK---------------------AC--------LIFFDEIDAIGGARFDDGAGG 292
Query: 357 DSEVQRTMLELLNQLDGFE 375
D+EVQRTMLEL+NQLDGF+
Sbjct: 293 DNEVQRTMLELINQLDGFD 311
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 221 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARSK 268
>gi|452823509|gb|EME30519.1| AAA-type ATPase [Galdieria sulphuraria]
Length = 426
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 136/315 (43%), Positives = 182/315 (57%), Gaps = 43/315 (13%)
Query: 73 DEAIKSSEGFKPYYVT----------KIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLR 122
D A+ S G PY + K+ + I KE + + +L A + ++
Sbjct: 22 DIALMKSYGLGPYALNIRKLEQEVKDKLTHINQICGIKESDTGLAPPSQWDLVADRQTMQ 81
Query: 123 EELQLLQEQGSYVGEVVKP-MDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNE 181
EE L Q + +++ P + K ++ V KFVV + + + D+ RV +
Sbjct: 82 EEQPL---QVARCTKIINPNTEDAKYMINVKQIAKFVVGLGEKVAPTDIEEGMRVGVDRN 138
Query: 182 SYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALG 241
Y + LP K+DP V++M VE+ PD TY VGG QI++I+EV+ELP+ +PE F ALG
Sbjct: 139 KYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGSKEQIEKIREVVELPLLNPEKFIALG 198
Query: 242 IAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAS 301
I PKGVLLYGPPGTGKTLLARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MA
Sbjct: 199 IDPPKGVLLYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMAR 258
Query: 302 LKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQ 361
KK C IIF DEID+IG +R + G+GGD+EVQ
Sbjct: 259 SKK---------------------AC--------IIFFDEIDAIGGARFDDGAGGDNEVQ 289
Query: 362 RTMLELLNQLDGFEA 376
RTMLE++NQLDGF+A
Sbjct: 290 RTMLEIVNQLDGFDA 304
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTLLARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 213 TGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSK 260
>gi|221481315|gb|EEE19709.1| 26S proteasome subunit, putative [Toxoplasma gondii GT1]
gi|221502038|gb|EEE27784.1| 26S proteasome subunit, putative [Toxoplasma gondii VEG]
Length = 441
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 113/242 (46%), Positives = 163/242 (67%), Gaps = 29/242 (11%)
Query: 135 VGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVD 194
VG + + +D++ +V ++ V+I +D + + P C V L N++ ++ IL ++VD
Sbjct: 110 VGNLEEIIDEQHAIVSSSIGPEYYVNILSFVDKDLLEPGCSVLLHNKTSSIVGILNDEVD 169
Query: 195 PLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPP 254
PL+S+M VEK P TY +GGL+ QI+E+KE +E P+ HPE FD +GI+ PKGV+LYGPP
Sbjct: 170 PLISVMKVEKAPLETYADIGGLEKQIQEVKEAVEFPLTHPEFFDDIGISPPKGVILYGPP 229
Query: 255 GTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLF 314
GTGKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRE+F +A
Sbjct: 230 GTGKTLLAKAVANETSATFLRVVGSELIQKYLGDGPKLVREMFKLA-------------- 275
Query: 315 WSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGF 374
EHAPSI+F+DEID++G+ R ++ SGG+ E+QRTMLELLNQLDGF
Sbjct: 276 ---------------HEHAPSIVFIDEIDAVGTKRYDATSGGEKEIQRTMLELLNQLDGF 320
Query: 375 EA 376
E+
Sbjct: 321 ES 322
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRE+F +A
Sbjct: 231 TGKTLLAKAVANETSATFLRVVGSELIQKYLGDGPKLVREMFKLA 275
>gi|67970603|dbj|BAE01644.1| unnamed protein product [Macaca fascicularis]
Length = 440
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 122/276 (44%), Positives = 169/276 (61%), Gaps = 29/276 (10%)
Query: 101 EQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVD 160
E+ R Q Q L K R ++ L+ VG + + +D +V + V
Sbjct: 75 EEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVSSEHYVS 134
Query: 161 IDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQI 220
I +D + + P C V L ++ + + +L + DPLV++M VEK P TY +GGLDNQI
Sbjct: 135 ILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQI 194
Query: 221 KEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSE 280
+EIKE +ELP+ HPE ++ +GI PKGV+LYGPPGTGKTLLA+AVA+ T TF+RV GSE
Sbjct: 195 QEIKESVELPLTHPEYYEEMGIRPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSE 254
Query: 281 LVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMD 340
L+QK++G+G ++VRELF +A EHAPSI+F+D
Sbjct: 255 LIQKYLGDGPKLVRELFRVAE-----------------------------EHAPSIVFID 285
Query: 341 EIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
EID+IG+ R +S SGG+ E+QRTMLELLNQLDGF++
Sbjct: 286 EIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDS 321
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 230 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 274
>gi|237838979|ref|XP_002368787.1| 26S proteasome subunit 4, putative [Toxoplasma gondii ME49]
gi|211966451|gb|EEB01647.1| 26S proteasome subunit 4, putative [Toxoplasma gondii ME49]
Length = 441
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 113/242 (46%), Positives = 163/242 (67%), Gaps = 29/242 (11%)
Query: 135 VGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVD 194
VG + + +D++ +V ++ V+I +D + + P C V L N++ ++ IL ++VD
Sbjct: 110 VGNLEEIIDEQHAIVSSSIGPEYYVNILSFVDKDLLEPGCSVLLHNKTSSIVGILNDEVD 169
Query: 195 PLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPP 254
PL+S+M VEK P TY +GGL+ QI+E+KE +E P+ HPE FD +GI+ PKGV+LYGPP
Sbjct: 170 PLISVMKVEKAPLETYADIGGLEKQIQEVKEAVEFPLTHPEFFDDIGISPPKGVILYGPP 229
Query: 255 GTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLF 314
GTGKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRE+F +A
Sbjct: 230 GTGKTLLAKAVANETSATFLRVVGSELIQKYLGDGPKLVREMFKLA-------------- 275
Query: 315 WSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGF 374
EHAPSI+F+DEID++G+ R ++ SGG+ E+QRTMLELLNQLDGF
Sbjct: 276 ---------------HEHAPSIVFIDEIDAVGTKRYDATSGGEKEIQRTMLELLNQLDGF 320
Query: 375 EA 376
E+
Sbjct: 321 ES 322
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRE+F +A
Sbjct: 231 TGKTLLAKAVANETSATFLRVVGSELIQKYLGDGPKLVREMFKLA 275
>gi|401400795|ref|XP_003880859.1| probable 26S protease regulatory subunit 6B,related [Neospora
caninum Liverpool]
gi|325115271|emb|CBZ50826.1| probable 26S protease regulatory subunit 6B,related [Neospora
caninum Liverpool]
Length = 443
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 113/242 (46%), Positives = 163/242 (67%), Gaps = 29/242 (11%)
Query: 135 VGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVD 194
VG + + +D++ +V ++ V+I +D + + P C V L N++ ++ IL ++VD
Sbjct: 112 VGNLEEIIDEQHAIVSSSIGPEYYVNILSFVDKDILEPGCSVLLHNKTSSIVGILNDEVD 171
Query: 195 PLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPP 254
PL+S+M VEK P TY +GGL+ QI+E+KE +E P+ HPE FD +GI+ PKGV+LYGPP
Sbjct: 172 PLISVMKVEKAPLETYADIGGLEKQIQEVKEAVEFPLTHPEFFDDIGISPPKGVILYGPP 231
Query: 255 GTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLF 314
GTGKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRE+F +A
Sbjct: 232 GTGKTLLAKAVANETSATFLRVVGSELIQKYLGDGPKLVREMFKLA-------------- 277
Query: 315 WSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGF 374
EHAPSI+F+DEID++G+ R ++ SGG+ E+QRTMLELLNQLDGF
Sbjct: 278 ---------------HEHAPSIVFIDEIDAVGTKRYDATSGGEKEIQRTMLELLNQLDGF 322
Query: 375 EA 376
E+
Sbjct: 323 ES 324
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRE+F +A
Sbjct: 233 TGKTLLAKAVANETSATFLRVVGSELIQKYLGDGPKLVREMFKLA 277
>gi|395503740|ref|XP_003756221.1| PREDICTED: 26S protease regulatory subunit 4 [Sarcophilus harrisii]
Length = 523
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 122/276 (44%), Positives = 169/276 (61%), Gaps = 29/276 (10%)
Query: 101 EQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVD 160
E+ R Q Q L K R ++ L+ VG + + +D +V + V
Sbjct: 158 EEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVS 217
Query: 161 IDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQI 220
I +D + + P C V L ++ + + +L + DPLV++M VEK P TY +GGLDNQI
Sbjct: 218 ILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQI 277
Query: 221 KEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSE 280
+EIKE +ELP+ HPE ++ +GI PKGV+LYGPPGTGKTLLA+AVA+ T TF+RV GSE
Sbjct: 278 QEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSE 337
Query: 281 LVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMD 340
L+QK++G+G ++VRELF +A EHAPSI+F+D
Sbjct: 338 LIQKYLGDGPKLVRELFRVAE-----------------------------EHAPSIVFID 368
Query: 341 EIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
EID+IG+ R +S SGG+ E+QRTMLELLNQLDGF++
Sbjct: 369 EIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDS 404
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 313 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 357
>gi|291406631|ref|XP_002719731.1| PREDICTED: protease (prosome, macropain) 26S subunit, ATPase 1-like
[Oryctolagus cuniculus]
Length = 511
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 122/276 (44%), Positives = 169/276 (61%), Gaps = 29/276 (10%)
Query: 101 EQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVD 160
E+ R Q Q L K R ++ L+ VG + + +D +V + V
Sbjct: 146 EEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVS 205
Query: 161 IDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQI 220
I +D + + P C V L ++ + + +L + DPLV++M VEK P TY +GGLDNQI
Sbjct: 206 ILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQI 265
Query: 221 KEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSE 280
+EIKE +ELP+ HPE ++ +GI PKGV+LYGPPGTGKTLLA+AVA+ T TF+RV GSE
Sbjct: 266 QEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSE 325
Query: 281 LVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMD 340
L+QK++G+G ++VRELF +A EHAPSI+F+D
Sbjct: 326 LIQKYLGDGPKLVRELFRVAE-----------------------------EHAPSIVFID 356
Query: 341 EIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
EID+IG+ R +S SGG+ E+QRTMLELLNQLDGF++
Sbjct: 357 EIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDS 392
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 301 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 345
>gi|384080897|dbj|BAM11111.1| proteasome (prosome, macropain) 26S subunit, ATPase, 1, partial
[Siebenrockiella crassicollis]
Length = 363
Score = 228 bits (582), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 122/276 (44%), Positives = 169/276 (61%), Gaps = 29/276 (10%)
Query: 101 EQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVD 160
E+ R Q Q L K R ++ L+ VG + + +D +V + V
Sbjct: 33 EEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVS 92
Query: 161 IDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQI 220
I +D + + P C V L ++ + + +L + DPLV++M VEK P TY +GGLDNQI
Sbjct: 93 ILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQI 152
Query: 221 KEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSE 280
+EIKE +ELP+ HPE ++ +GI PKGV+LYGPPGTGKTLLA+AVA+ T TF+RV GSE
Sbjct: 153 QEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSE 212
Query: 281 LVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMD 340
L+QK++G+G ++VRELF +A EHAPSI+F+D
Sbjct: 213 LIQKYLGDGPKLVRELFRVAE-----------------------------EHAPSIVFID 243
Query: 341 EIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
EID+IG+ R +S SGG+ E+QRTMLELLNQLDGF++
Sbjct: 244 EIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDS 279
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 188 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 232
>gi|344273631|ref|XP_003408624.1| PREDICTED: 26S protease regulatory subunit 4-like [Loxodonta
africana]
Length = 451
Score = 228 bits (582), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 122/276 (44%), Positives = 169/276 (61%), Gaps = 29/276 (10%)
Query: 101 EQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVD 160
E+ R Q Q L K R ++ L+ VG + + +D +V + V
Sbjct: 86 EEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVS 145
Query: 161 IDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQI 220
I +D + + P C V L ++ + + +L + DPLV++M VEK P TY +GGLDNQI
Sbjct: 146 ILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQI 205
Query: 221 KEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSE 280
+EIKE +ELP+ HPE ++ +GI PKGV+LYGPPGTGKTLLA+AVA+ T TF+RV GSE
Sbjct: 206 QEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSE 265
Query: 281 LVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMD 340
L+QK++G+G ++VRELF +A EHAPSI+F+D
Sbjct: 266 LIQKYLGDGPKLVRELFRVAE-----------------------------EHAPSIVFID 296
Query: 341 EIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
EID+IG+ R +S SGG+ E+QRTMLELLNQLDGF++
Sbjct: 297 EIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDS 332
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 241 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 285
>gi|387017822|gb|AFJ51029.1| 26S protease regulatory subunit 4 [Crotalus adamanteus]
Length = 440
Score = 228 bits (582), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 122/276 (44%), Positives = 169/276 (61%), Gaps = 29/276 (10%)
Query: 101 EQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVD 160
E+ R Q Q L K R ++ L+ VG + + +D +V + V
Sbjct: 75 EEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVS 134
Query: 161 IDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQI 220
I +D + + P C V L ++ + + +L + DPLV++M VEK P TY +GGLDNQI
Sbjct: 135 ILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQI 194
Query: 221 KEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSE 280
+EIKE +ELP+ HPE ++ +GI PKGV+LYGPPGTGKTLLA+AVA+ T TF+RV GSE
Sbjct: 195 QEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSE 254
Query: 281 LVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMD 340
L+QK++G+G ++VRELF +A EHAPSI+F+D
Sbjct: 255 LIQKYLGDGPKLVRELFRVAE-----------------------------EHAPSIVFID 285
Query: 341 EIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
EID+IG+ R +S SGG+ E+QRTMLELLNQLDGF++
Sbjct: 286 EIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDS 321
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 230 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 274
>gi|114654363|ref|XP_001142024.1| PREDICTED: 26S protease regulatory subunit 4 isoform 1 [Pan
troglodytes]
gi|332223520|ref|XP_003260921.1| PREDICTED: 26S protease regulatory subunit 4 isoform 2 [Nomascus
leucogenys]
gi|338720044|ref|XP_003364111.1| PREDICTED: 26S protease regulatory subunit 4 isoform 2 [Equus
caballus]
gi|395756094|ref|XP_003780072.1| PREDICTED: 26S protease regulatory subunit 4-like isoform 2 [Pongo
abelii]
gi|397525729|ref|XP_003832808.1| PREDICTED: 26S protease regulatory subunit 4 isoform 2 [Pan
paniscus]
gi|402876939|ref|XP_003902205.1| PREDICTED: 26S protease regulatory subunit 4 isoform 2 [Papio
anubis]
gi|426233770|ref|XP_004010887.1| PREDICTED: 26S protease regulatory subunit 4 [Ovis aries]
gi|194386730|dbj|BAG61175.1| unnamed protein product [Homo sapiens]
Length = 367
Score = 228 bits (582), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 122/276 (44%), Positives = 169/276 (61%), Gaps = 29/276 (10%)
Query: 101 EQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVD 160
E+ R Q Q L K R ++ L+ VG + + +D +V + V
Sbjct: 2 EEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVS 61
Query: 161 IDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQI 220
I +D + + P C V L ++ + + +L + DPLV++M VEK P TY +GGLDNQI
Sbjct: 62 ILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQI 121
Query: 221 KEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSE 280
+EIKE +ELP+ HPE ++ +GI PKGV+LYGPPGTGKTLLA+AVA+ T TF+RV GSE
Sbjct: 122 QEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSE 181
Query: 281 LVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMD 340
L+QK++G+G ++VRELF +A EHAPSI+F+D
Sbjct: 182 LIQKYLGDGPKLVRELFRVAE-----------------------------EHAPSIVFID 212
Query: 341 EIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
EID+IG+ R +S SGG+ E+QRTMLELLNQLDGF++
Sbjct: 213 EIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDS 248
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 157 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 201
>gi|45767857|gb|AAH67741.1| Proteasome (prosome, macropain) 26S subunit, ATPase, 1 [Homo
sapiens]
Length = 440
Score = 228 bits (582), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 122/276 (44%), Positives = 169/276 (61%), Gaps = 29/276 (10%)
Query: 101 EQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVD 160
E+ R Q Q L K R ++ L+ VG + + +D +V + V
Sbjct: 75 EEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVS 134
Query: 161 IDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQI 220
I +D + + P C V L ++ + + +L + DPLV++M VEK P TY +GGLDNQI
Sbjct: 135 ILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQI 194
Query: 221 KEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSE 280
+EIKE +ELP+ HPE ++ +GI PKGV+LYGPPGTGKTLLA+AVA+ T TF+RV GSE
Sbjct: 195 QEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSE 254
Query: 281 LVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMD 340
L+QK++G+G ++VRELF +A EHAPSI+F+D
Sbjct: 255 LIQKYLGDGPKLVRELFRVAE-----------------------------EHAPSIVFID 285
Query: 341 EIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
EID+IG+ R +S SGG+ E+QRTMLELLNQLDGF++
Sbjct: 286 EIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDS 321
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 230 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 274
>gi|410962805|ref|XP_003987959.1| PREDICTED: 26S protease regulatory subunit 4 isoform 1 [Felis
catus]
Length = 440
Score = 228 bits (582), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 122/276 (44%), Positives = 169/276 (61%), Gaps = 29/276 (10%)
Query: 101 EQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVD 160
E+ R Q Q L K R ++ L+ VG + + +D +V + V
Sbjct: 75 EEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVS 134
Query: 161 IDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQI 220
I +D + + P C V L ++ + + +L + DPLV++M VEK P TY +GGLDNQI
Sbjct: 135 ILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQI 194
Query: 221 KEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSE 280
+EIKE +ELP+ HPE ++ +GI PKGV+LYGPPGTGKTLLA+AVA+ T TF+RV GSE
Sbjct: 195 QEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSE 254
Query: 281 LVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMD 340
L+QK++G+G ++VRELF +A EHAPSI+F+D
Sbjct: 255 LIQKYLGDGPKLVRELFRVAE-----------------------------EHAPSIVFID 285
Query: 341 EIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
EID+IG+ R +S SGG+ E+QRTMLELLNQLDGF++
Sbjct: 286 EIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDS 321
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 230 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 274
>gi|149486736|ref|XP_001517805.1| PREDICTED: 26S protease regulatory subunit 4-like, partial
[Ornithorhynchus anatinus]
Length = 388
Score = 228 bits (582), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 122/276 (44%), Positives = 169/276 (61%), Gaps = 29/276 (10%)
Query: 101 EQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVD 160
E+ R Q Q L K R ++ L+ VG + + +D +V + V
Sbjct: 23 EEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVS 82
Query: 161 IDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQI 220
I +D + + P C V L ++ + + +L + DPLV++M VEK P TY +GGLDNQI
Sbjct: 83 ILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQI 142
Query: 221 KEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSE 280
+EIKE +ELP+ HPE ++ +GI PKGV+LYGPPGTGKTLLA+AVA+ T TF+RV GSE
Sbjct: 143 QEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSE 202
Query: 281 LVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMD 340
L+QK++G+G ++VRELF +A EHAPSI+F+D
Sbjct: 203 LIQKYLGDGPKLVRELFRVAE-----------------------------EHAPSIVFID 233
Query: 341 EIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
EID+IG+ R +S SGG+ E+QRTMLELLNQLDGF++
Sbjct: 234 EIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDS 269
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 178 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 222
>gi|62896895|dbj|BAD96388.1| proteasome 26S ATPase subunit 1 variant [Homo sapiens]
Length = 440
Score = 228 bits (582), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 122/276 (44%), Positives = 169/276 (61%), Gaps = 29/276 (10%)
Query: 101 EQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVD 160
E+ R Q Q L K R ++ L+ VG + + +D +V + V
Sbjct: 75 EEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVS 134
Query: 161 IDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQI 220
I +D + + P C V L ++ + + +L + DPLV++M VEK P TY +GGLDNQI
Sbjct: 135 ILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQI 194
Query: 221 KEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSE 280
+EIKE +ELP+ HPE ++ +GI PKGV+LYGPPGTGKTLLA+AVA+ T TF+RV GSE
Sbjct: 195 QEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSE 254
Query: 281 LVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMD 340
L+QK++G+G ++VRELF +A EHAPSI+F+D
Sbjct: 255 LIQKYLGDGPKLVRELFRVAE-----------------------------EHAPSIVFID 285
Query: 341 EIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
EID+IG+ R +S SGG+ E+QRTMLELLNQLDGF++
Sbjct: 286 EIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDS 321
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 230 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 274
>gi|403456|gb|AAA35484.1| 26S protease (S4) regulatory subunit [Homo sapiens]
Length = 440
Score = 228 bits (582), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 122/276 (44%), Positives = 169/276 (61%), Gaps = 29/276 (10%)
Query: 101 EQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVD 160
E+ R Q Q L K R ++ L+ VG + + +D +V + V
Sbjct: 75 EEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVS 134
Query: 161 IDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQI 220
I +D + + P C V L ++ + + +L + DPLV++M VEK P TY +GGLDNQI
Sbjct: 135 ILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQI 194
Query: 221 KEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSE 280
+EIKE +ELP+ HPE ++ +GI PKGV+LYGPPGTGKTLLA+AVA+ T TF+RV GSE
Sbjct: 195 QEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSE 254
Query: 281 LVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMD 340
L+QK++G+G ++VRELF +A EHAPSI+F+D
Sbjct: 255 LIQKYLGDGPKLVRELFRVAE-----------------------------EHAPSIVFID 285
Query: 341 EIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
EID+IG+ R +S SGG+ E+QRTMLELLNQLDGF++
Sbjct: 286 EIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDS 321
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 230 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 274
>gi|6679501|ref|NP_032973.1| 26S protease regulatory subunit 4 [Mus musculus]
gi|16923972|ref|NP_476464.1| 26S protease regulatory subunit 4 [Rattus norvegicus]
gi|24430151|ref|NP_002793.2| 26S protease regulatory subunit 4 [Homo sapiens]
gi|113931412|ref|NP_001039154.1| proteasome (prosome, macropain) 26S subunit, ATPase, 1 [Xenopus
(Silurana) tropicalis]
gi|346421411|ref|NP_001231080.1| proteasome (prosome, macropain) 26S subunit, ATPase, 1 [Sus scrofa]
gi|354459384|ref|NP_001238880.1| 26S protease regulatory subunit 4 [Canis lupus familiaris]
gi|388453421|ref|NP_001253262.1| proteasome (prosome, macropain) 26S subunit, ATPase, 1 [Macaca
mulatta]
gi|114654359|ref|XP_510114.2| PREDICTED: 26S protease regulatory subunit 4 isoform 3 [Pan
troglodytes]
gi|194225274|ref|XP_001494140.2| PREDICTED: 26S protease regulatory subunit 4 isoform 1 [Equus
caballus]
gi|296215716|ref|XP_002754239.1| PREDICTED: 26S protease regulatory subunit 4 [Callithrix jacchus]
gi|297714911|ref|XP_002833857.1| PREDICTED: 26S protease regulatory subunit 4-like isoform 1 [Pongo
abelii]
gi|332223518|ref|XP_003260920.1| PREDICTED: 26S protease regulatory subunit 4 isoform 1 [Nomascus
leucogenys]
gi|334310732|ref|XP_001371702.2| PREDICTED: 26S protease regulatory subunit 4-like [Monodelphis
domestica]
gi|354478471|ref|XP_003501438.1| PREDICTED: 26S protease regulatory subunit 4-like [Cricetulus
griseus]
gi|397525727|ref|XP_003832807.1| PREDICTED: 26S protease regulatory subunit 4 isoform 1 [Pan
paniscus]
gi|402876937|ref|XP_003902204.1| PREDICTED: 26S protease regulatory subunit 4 isoform 1 [Papio
anubis]
gi|49065780|sp|P62193.1|PRS4_RAT RecName: Full=26S protease regulatory subunit 4; Short=P26s4;
AltName: Full=26S proteasome AAA-ATPase subunit RPT2;
AltName: Full=Proteasome 26S subunit ATPase 1
gi|49065817|sp|P62191.1|PRS4_HUMAN RecName: Full=26S protease regulatory subunit 4; Short=P26s4;
AltName: Full=26S proteasome AAA-ATPase subunit RPT2;
AltName: Full=Proteasome 26S subunit ATPase 1
gi|49065818|sp|P62192.1|PRS4_MOUSE RecName: Full=26S protease regulatory subunit 4; Short=P26s4;
AltName: Full=26S proteasome AAA-ATPase subunit RPT2;
AltName: Full=Proteasome 26S subunit ATPase 1
gi|1066067|gb|AAB34137.1| P26s4 [Mus musculus]
gi|1395182|dbj|BAA09341.1| proteasomal ATPase (S4) [Rattus norvegicus]
gi|12653481|gb|AAH00512.1| Proteasome (prosome, macropain) 26S subunit, ATPase, 1 [Homo
sapiens]
gi|13277996|gb|AAH03860.1| Protease (prosome, macropain) 26S subunit, ATPase 1 [Mus musculus]
gi|26353418|dbj|BAC40339.1| unnamed protein product [Mus musculus]
gi|32879995|gb|AAP88828.1| proteasome (prosome, macropain) 26S subunit, ATPase, 1 [Homo
sapiens]
gi|38970033|gb|AAH63157.1| Proteasome (prosome, macropain) 26S subunit, ATPase, 1 [Rattus
norvegicus]
gi|48146205|emb|CAG33325.1| PSMC1 [Homo sapiens]
gi|49522871|gb|AAH73818.1| Proteasome (prosome, macropain) 26S subunit, ATPase, 1 [Homo
sapiens]
gi|61359328|gb|AAX41701.1| proteasome 26S subunit 1 [synthetic construct]
gi|61359333|gb|AAX41702.1| proteasome 26S subunit 1 [synthetic construct]
gi|61359339|gb|AAX41703.1| proteasome 26S subunit 1 [synthetic construct]
gi|74139332|dbj|BAE40812.1| unnamed protein product [Mus musculus]
gi|74177859|dbj|BAE39016.1| unnamed protein product [Mus musculus]
gi|74179883|dbj|BAE36506.1| unnamed protein product [Mus musculus]
gi|74223651|dbj|BAE28695.1| unnamed protein product [Mus musculus]
gi|74228913|dbj|BAE21929.1| unnamed protein product [Mus musculus]
gi|89272512|emb|CAJ83548.1| proteasome (prosome, macropain) 26S subunit, ATPase, 1 [Xenopus
(Silurana) tropicalis]
gi|119601825|gb|EAW81419.1| proteasome (prosome, macropain) 26S subunit, ATPase, 1, isoform
CRA_a [Homo sapiens]
gi|123981600|gb|ABM82629.1| proteasome (prosome, macropain) 26S subunit, ATPase, 1 [synthetic
construct]
gi|123996411|gb|ABM85807.1| proteasome (prosome, macropain) 26S subunit, ATPase, 1 [synthetic
construct]
gi|133778179|gb|AAI23488.1| Proteasome (prosome, macropain) 26S subunit, ATPase, 1 [Bos taurus]
gi|148686957|gb|EDL18904.1| mCG122657 [Mus musculus]
gi|149025345|gb|EDL81712.1| peptidase (prosome, macropain) 26S subunit, ATPase 1 [Rattus
norvegicus]
gi|189055350|dbj|BAG36130.1| unnamed protein product [Homo sapiens]
gi|197692323|dbj|BAG70125.1| proteasome 26S ATPase subunit 1 [Homo sapiens]
gi|197692583|dbj|BAG70255.1| proteasome 26S ATPase subunit 1 [Homo sapiens]
gi|208965388|dbj|BAG72708.1| proteasome (prosome, macropain) 26S subunit, ATPase, 1 [synthetic
construct]
gi|296482890|tpg|DAA25005.1| TPA: proteasome 26S ATPase subunit 1 [Bos taurus]
gi|380814860|gb|AFE79304.1| 26S protease regulatory subunit 4 [Macaca mulatta]
gi|384948366|gb|AFI37788.1| 26S protease regulatory subunit 4 [Macaca mulatta]
gi|410264742|gb|JAA20337.1| proteasome (prosome, macropain) 26S subunit, ATPase, 1 [Pan
troglodytes]
gi|410288484|gb|JAA22842.1| proteasome (prosome, macropain) 26S subunit, ATPase, 1 [Pan
troglodytes]
gi|410336969|gb|JAA37431.1| proteasome (prosome, macropain) 26S subunit, ATPase, 1 [Pan
troglodytes]
Length = 440
Score = 228 bits (582), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 122/276 (44%), Positives = 169/276 (61%), Gaps = 29/276 (10%)
Query: 101 EQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVD 160
E+ R Q Q L K R ++ L+ VG + + +D +V + V
Sbjct: 75 EEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVS 134
Query: 161 IDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQI 220
I +D + + P C V L ++ + + +L + DPLV++M VEK P TY +GGLDNQI
Sbjct: 135 ILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQI 194
Query: 221 KEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSE 280
+EIKE +ELP+ HPE ++ +GI PKGV+LYGPPGTGKTLLA+AVA+ T TF+RV GSE
Sbjct: 195 QEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSE 254
Query: 281 LVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMD 340
L+QK++G+G ++VRELF +A EHAPSI+F+D
Sbjct: 255 LIQKYLGDGPKLVRELFRVAE-----------------------------EHAPSIVFID 285
Query: 341 EIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
EID+IG+ R +S SGG+ E+QRTMLELLNQLDGF++
Sbjct: 286 EIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDS 321
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 230 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 274
>gi|426377736|ref|XP_004055613.1| PREDICTED: 26S protease regulatory subunit 4 isoform 2 [Gorilla
gorilla gorilla]
Length = 367
Score = 228 bits (582), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 122/276 (44%), Positives = 169/276 (61%), Gaps = 29/276 (10%)
Query: 101 EQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVD 160
E+ R Q Q L K R ++ L+ VG + + +D +V + V
Sbjct: 2 EEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVS 61
Query: 161 IDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQI 220
I +D + + P C V L ++ + + +L + DPLV++M VEK P TY +GGLDNQI
Sbjct: 62 ILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQI 121
Query: 221 KEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSE 280
+EIKE +ELP+ HPE ++ +GI PKGV+LYGPPGTGKTLLA+AVA+ T TF+RV GSE
Sbjct: 122 QEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSE 181
Query: 281 LVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMD 340
L+QK++G+G ++VRELF +A EHAPSI+F+D
Sbjct: 182 LIQKYLGDGPKLVRELFRVAE-----------------------------EHAPSIVFID 212
Query: 341 EIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
EID+IG+ R +S SGG+ E+QRTMLELLNQLDGF++
Sbjct: 213 EIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDS 248
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 157 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 201
>gi|417410858|gb|JAA51895.1| Putative 26s proteasome regulatory complex atpase rpt6, partial
[Desmodus rotundus]
Length = 456
Score = 228 bits (582), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 122/276 (44%), Positives = 169/276 (61%), Gaps = 29/276 (10%)
Query: 101 EQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVD 160
E+ R Q Q L K R ++ L+ VG + + +D +V + V
Sbjct: 91 EEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVS 150
Query: 161 IDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQI 220
I +D + + P C V L ++ + + +L + DPLV++M VEK P TY +GGLDNQI
Sbjct: 151 ILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQI 210
Query: 221 KEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSE 280
+EIKE +ELP+ HPE ++ +GI PKGV+LYGPPGTGKTLLA+AVA+ T TF+RV GSE
Sbjct: 211 QEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSE 270
Query: 281 LVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMD 340
L+QK++G+G ++VRELF +A EHAPSI+F+D
Sbjct: 271 LIQKYLGDGPKLVRELFRVAE-----------------------------EHAPSIVFID 301
Query: 341 EIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
EID+IG+ R +S SGG+ E+QRTMLELLNQLDGF++
Sbjct: 302 EIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDS 337
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 246 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 290
>gi|326920936|ref|XP_003206722.1| PREDICTED: 26S protease regulatory subunit 4-like, partial
[Meleagris gallopavo]
Length = 429
Score = 228 bits (582), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 122/276 (44%), Positives = 169/276 (61%), Gaps = 29/276 (10%)
Query: 101 EQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVD 160
E+ R Q Q L K R ++ L+ VG + + +D +V + V
Sbjct: 64 EEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVS 123
Query: 161 IDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQI 220
I +D + + P C V L ++ + + +L + DPLV++M VEK P TY +GGLDNQI
Sbjct: 124 ILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQI 183
Query: 221 KEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSE 280
+EIKE +ELP+ HPE ++ +GI PKGV+LYGPPGTGKTLLA+AVA+ T TF+RV GSE
Sbjct: 184 QEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSE 243
Query: 281 LVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMD 340
L+QK++G+G ++VRELF +A EHAPSI+F+D
Sbjct: 244 LIQKYLGDGPKLVRELFRVAE-----------------------------EHAPSIVFID 274
Query: 341 EIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
EID+IG+ R +S SGG+ E+QRTMLELLNQLDGF++
Sbjct: 275 EIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDS 310
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 219 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 263
>gi|348506376|ref|XP_003440735.1| PREDICTED: 26S protease regulatory subunit 4-like [Oreochromis
niloticus]
gi|410916059|ref|XP_003971504.1| PREDICTED: 26S protease regulatory subunit 4-like [Takifugu
rubripes]
Length = 440
Score = 228 bits (582), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 122/276 (44%), Positives = 169/276 (61%), Gaps = 29/276 (10%)
Query: 101 EQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVD 160
E+ R Q Q L K R ++ L+ VG + + +D +V + V
Sbjct: 75 EEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVS 134
Query: 161 IDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQI 220
I +D + + P C V L ++ + + +L + DPLV++M VEK P TY +GGLDNQI
Sbjct: 135 ILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQI 194
Query: 221 KEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSE 280
+EIKE +ELP+ HPE ++ +GI PKGV+LYGPPGTGKTLLA+AVA+ T TF+RV GSE
Sbjct: 195 QEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSE 254
Query: 281 LVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMD 340
L+QK++G+G ++VRELF +A EHAPSI+F+D
Sbjct: 255 LIQKYLGDGPKLVRELFRVAE-----------------------------EHAPSIVFID 285
Query: 341 EIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
EID+IG+ R +S SGG+ E+QRTMLELLNQLDGF++
Sbjct: 286 EIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDS 321
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 230 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 274
>gi|410962807|ref|XP_003987960.1| PREDICTED: 26S protease regulatory subunit 4 isoform 2 [Felis
catus]
Length = 367
Score = 228 bits (582), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 122/276 (44%), Positives = 169/276 (61%), Gaps = 29/276 (10%)
Query: 101 EQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVD 160
E+ R Q Q L K R ++ L+ VG + + +D +V + V
Sbjct: 2 EEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVS 61
Query: 161 IDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQI 220
I +D + + P C V L ++ + + +L + DPLV++M VEK P TY +GGLDNQI
Sbjct: 62 ILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQI 121
Query: 221 KEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSE 280
+EIKE +ELP+ HPE ++ +GI PKGV+LYGPPGTGKTLLA+AVA+ T TF+RV GSE
Sbjct: 122 QEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSE 181
Query: 281 LVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMD 340
L+QK++G+G ++VRELF +A EHAPSI+F+D
Sbjct: 182 LIQKYLGDGPKLVRELFRVAE-----------------------------EHAPSIVFID 212
Query: 341 EIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
EID+IG+ R +S SGG+ E+QRTMLELLNQLDGF++
Sbjct: 213 EIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDS 248
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 157 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 201
>gi|432945647|ref|XP_004083702.1| PREDICTED: 26S protease regulatory subunit 4-like [Oryzias latipes]
Length = 440
Score = 228 bits (582), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 122/276 (44%), Positives = 169/276 (61%), Gaps = 29/276 (10%)
Query: 101 EQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVD 160
E+ R Q Q L K R ++ L+ VG + + +D +V + V
Sbjct: 75 EEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVS 134
Query: 161 IDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQI 220
I +D + + P C V L ++ + + +L + DPLV++M VEK P TY +GGLDNQI
Sbjct: 135 ILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQI 194
Query: 221 KEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSE 280
+EIKE +ELP+ HPE ++ +GI PKGV+LYGPPGTGKTLLA+AVA+ T TF+RV GSE
Sbjct: 195 QEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSE 254
Query: 281 LVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMD 340
L+QK++G+G ++VRELF +A EHAPSI+F+D
Sbjct: 255 LIQKYLGDGPKLVRELFRVAE-----------------------------EHAPSIVFID 285
Query: 341 EIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
EID+IG+ R +S SGG+ E+QRTMLELLNQLDGF++
Sbjct: 286 EIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDS 321
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 230 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 274
>gi|426377734|ref|XP_004055612.1| PREDICTED: 26S protease regulatory subunit 4 isoform 1 [Gorilla
gorilla gorilla]
Length = 440
Score = 228 bits (582), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 122/276 (44%), Positives = 169/276 (61%), Gaps = 29/276 (10%)
Query: 101 EQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVD 160
E+ R Q Q L K R ++ L+ VG + + +D +V + V
Sbjct: 75 EEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVS 134
Query: 161 IDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQI 220
I +D + + P C V L ++ + + +L + DPLV++M VEK P TY +GGLDNQI
Sbjct: 135 ILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQI 194
Query: 221 KEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSE 280
+EIKE +ELP+ HPE ++ +GI PKGV+LYGPPGTGKTLLA+AVA+ T TF+RV GSE
Sbjct: 195 QEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSE 254
Query: 281 LVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMD 340
L+QK++G+G ++VRELF +A EHAPSI+F+D
Sbjct: 255 LIQKYLGDGPKLVRELFRVAE-----------------------------EHAPSIVFID 285
Query: 341 EIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
EID+IG+ R +S SGG+ E+QRTMLELLNQLDGF++
Sbjct: 286 EIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDS 321
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 230 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 274
>gi|47222682|emb|CAG00116.1| unnamed protein product [Tetraodon nigroviridis]
Length = 440
Score = 228 bits (582), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 122/276 (44%), Positives = 169/276 (61%), Gaps = 29/276 (10%)
Query: 101 EQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVD 160
E+ R Q Q L K R ++ L+ VG + + +D +V + V
Sbjct: 75 EEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVS 134
Query: 161 IDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQI 220
I +D + + P C V L ++ + + +L + DPLV++M VEK P TY +GGLDNQI
Sbjct: 135 ILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQI 194
Query: 221 KEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSE 280
+EIKE +ELP+ HPE ++ +GI PKGV+LYGPPGTGKTLLA+AVA+ T TF+RV GSE
Sbjct: 195 QEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSE 254
Query: 281 LVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMD 340
L+QK++G+G ++VRELF +A EHAPSI+F+D
Sbjct: 255 LIQKYLGDGPKLVRELFRVAE-----------------------------EHAPSIVFID 285
Query: 341 EIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
EID+IG+ R +S SGG+ E+QRTMLELLNQLDGF++
Sbjct: 286 EIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDS 321
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 230 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 274
>gi|62460402|ref|NP_001014855.1| 26S protease regulatory subunit 4 [Bos taurus]
gi|59858331|gb|AAX09000.1| proteasome 26S ATPase subunit 1 [Bos taurus]
Length = 440
Score = 228 bits (581), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 122/276 (44%), Positives = 169/276 (61%), Gaps = 29/276 (10%)
Query: 101 EQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVD 160
E+ R Q Q L K R ++ L+ VG + + +D +V + V
Sbjct: 75 EEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVS 134
Query: 161 IDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQI 220
I +D + + P C V L ++ + + +L + DPLV++M VEK P TY +GGLDNQI
Sbjct: 135 ILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQI 194
Query: 221 KEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSE 280
+EIKE +ELP+ HPE ++ +GI PKGV+LYGPPGTGKTLLA+AVA+ T TF+RV GSE
Sbjct: 195 QEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSE 254
Query: 281 LVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMD 340
L+QK++G+G ++VRELF +A EHAPSI+F+D
Sbjct: 255 LIQKYLGDGPKLVRELFRVAE-----------------------------EHAPSIVFID 285
Query: 341 EIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
EID+IG+ R +S SGG+ E+QRTMLELLNQLDGF++
Sbjct: 286 EIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDS 321
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 230 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 274
>gi|351699682|gb|EHB02601.1| 26S protease regulatory subunit 4, partial [Heterocephalus glaber]
Length = 440
Score = 228 bits (581), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 122/276 (44%), Positives = 169/276 (61%), Gaps = 29/276 (10%)
Query: 101 EQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVD 160
E+ R Q Q L K R ++ L+ VG + + +D +V + V
Sbjct: 75 EEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVS 134
Query: 161 IDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQI 220
I +D + + P C V L ++ + + +L + DPLV++M VEK P TY +GGLDNQI
Sbjct: 135 ILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQI 194
Query: 221 KEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSE 280
+EIKE +ELP+ HPE ++ +GI PKGV+LYGPPGTGKTLLA+AVA+ T TF+RV GSE
Sbjct: 195 QEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSE 254
Query: 281 LVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMD 340
L+QK++G+G ++VRELF +A EHAPSI+F+D
Sbjct: 255 LIQKYLGDGPKLVRELFRVAE-----------------------------EHAPSIVFID 285
Query: 341 EIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
EID+IG+ R +S SGG+ E+QRTMLELLNQLDGF++
Sbjct: 286 EIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDS 321
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 230 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 274
>gi|301770835|ref|XP_002920836.1| PREDICTED: 26S protease regulatory subunit 4-like [Ailuropoda
melanoleuca]
Length = 454
Score = 228 bits (581), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 122/276 (44%), Positives = 169/276 (61%), Gaps = 29/276 (10%)
Query: 101 EQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVD 160
E+ R Q Q L K R ++ L+ VG + + +D +V + V
Sbjct: 89 EEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVS 148
Query: 161 IDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQI 220
I +D + + P C V L ++ + + +L + DPLV++M VEK P TY +GGLDNQI
Sbjct: 149 ILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQI 208
Query: 221 KEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSE 280
+EIKE +ELP+ HPE ++ +GI PKGV+LYGPPGTGKTLLA+AVA+ T TF+RV GSE
Sbjct: 209 QEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSE 268
Query: 281 LVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMD 340
L+QK++G+G ++VRELF +A EHAPSI+F+D
Sbjct: 269 LIQKYLGDGPKLVRELFRVAE-----------------------------EHAPSIVFID 299
Query: 341 EIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
EID+IG+ R +S SGG+ E+QRTMLELLNQLDGF++
Sbjct: 300 EIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDS 335
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 244 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 288
>gi|431839200|gb|ELK01127.1| 26S protease regulatory subunit 4 [Pteropus alecto]
Length = 498
Score = 228 bits (581), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 122/276 (44%), Positives = 169/276 (61%), Gaps = 29/276 (10%)
Query: 101 EQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVD 160
E+ R Q Q L K R ++ L+ VG + + +D +V + V
Sbjct: 133 EEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVS 192
Query: 161 IDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQI 220
I +D + + P C V L ++ + + +L + DPLV++M VEK P TY +GGLDNQI
Sbjct: 193 ILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQI 252
Query: 221 KEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSE 280
+EIKE +ELP+ HPE ++ +GI PKGV+LYGPPGTGKTLLA+AVA+ T TF+RV GSE
Sbjct: 253 QEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSE 312
Query: 281 LVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMD 340
L+QK++G+G ++VRELF +A EHAPSI+F+D
Sbjct: 313 LIQKYLGDGPKLVRELFRVAE-----------------------------EHAPSIVFID 343
Query: 341 EIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
EID+IG+ R +S SGG+ E+QRTMLELLNQLDGF++
Sbjct: 344 EIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDS 379
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 288 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 332
>gi|343959924|dbj|BAK63819.1| 26S protease regulatory subunit 4 [Pan troglodytes]
Length = 349
Score = 228 bits (581), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 122/276 (44%), Positives = 169/276 (61%), Gaps = 29/276 (10%)
Query: 101 EQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVD 160
E+ R Q Q L K R ++ L+ VG + + +D +V + V
Sbjct: 75 EEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVS 134
Query: 161 IDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQI 220
I +D + + P C V L ++ + + +L + DPLV++M VEK P TY +GGLDNQI
Sbjct: 135 ILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQI 194
Query: 221 KEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSE 280
+EIKE +ELP+ HPE ++ +GI PKGV+LYGPPGTGKTLLA+AVA+ T TF+RV GSE
Sbjct: 195 QEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSE 254
Query: 281 LVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMD 340
L+QK++G+G ++VRELF +A EHAPSI+F+D
Sbjct: 255 LIQKYLGDGPKLVRELFRVA-----------------------------EEHAPSIVFID 285
Query: 341 EIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
EID+IG+ R +S SGG+ E+QRTMLELLNQLDGF++
Sbjct: 286 EIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDS 321
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 230 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 274
>gi|327259152|ref|XP_003214402.1| PREDICTED: 26S protease regulatory subunit 4-like [Anolis
carolinensis]
Length = 440
Score = 228 bits (580), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 122/276 (44%), Positives = 169/276 (61%), Gaps = 29/276 (10%)
Query: 101 EQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVD 160
E+ R Q Q L K R ++ L+ VG + + +D +V + V
Sbjct: 75 EEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVS 134
Query: 161 IDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQI 220
I +D + + P C V L ++ + + +L + DPLV++M VEK P TY +GGLDNQI
Sbjct: 135 ILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQI 194
Query: 221 KEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSE 280
+EIKE +ELP+ HPE ++ +GI PKGV+LYGPPGTGKTLLA+AVA+ T TF+RV GSE
Sbjct: 195 QEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSE 254
Query: 281 LVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMD 340
L+QK++G+G ++VRELF +A EHAPSI+F+D
Sbjct: 255 LIQKYLGDGPKLVRELFRVAE-----------------------------EHAPSIVFID 285
Query: 341 EIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
EID+IG+ R +S SGG+ E+QRTMLELLNQLDGF++
Sbjct: 286 EIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDS 321
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 230 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 274
>gi|109104429|ref|XP_001103312.1| PREDICTED: 26S protease regulatory subunit 4-like [Macaca mulatta]
Length = 440
Score = 228 bits (580), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 121/276 (43%), Positives = 169/276 (61%), Gaps = 29/276 (10%)
Query: 101 EQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVD 160
E+ R Q Q L K R ++ L+ VG + + +D +V + +
Sbjct: 75 EEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYIS 134
Query: 161 IDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQI 220
I +D + + P C V L ++ + + +L + DPLV++M VEK P TY +GGLDNQI
Sbjct: 135 ILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQI 194
Query: 221 KEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSE 280
+EIKE +ELP+ HPE ++ +GI PKGV+LYGPPGTGKTLLA+AVA+ T TF+RV GSE
Sbjct: 195 QEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSE 254
Query: 281 LVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMD 340
L+QK++G+G ++VRELF +A EHAPSI+F+D
Sbjct: 255 LIQKYLGDGPKLVRELFRVAE-----------------------------EHAPSIVFID 285
Query: 341 EIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
EID+IG+ R +S SGG+ E+QRTMLELLNQLDGF++
Sbjct: 286 EIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDS 321
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 230 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 274
>gi|348573225|ref|XP_003472392.1| PREDICTED: 26S protease regulatory subunit 4-like [Cavia porcellus]
Length = 564
Score = 228 bits (580), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 122/276 (44%), Positives = 169/276 (61%), Gaps = 29/276 (10%)
Query: 101 EQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVD 160
E+ R Q Q L K R ++ L+ VG + + +D +V + V
Sbjct: 199 EEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVS 258
Query: 161 IDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQI 220
I +D + + P C V L ++ + + +L + DPLV++M VEK P TY +GGLDNQI
Sbjct: 259 ILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQI 318
Query: 221 KEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSE 280
+EIKE +ELP+ HPE ++ +GI PKGV+LYGPPGTGKTLLA+AVA+ T TF+RV GSE
Sbjct: 319 QEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSE 378
Query: 281 LVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMD 340
L+QK++G+G ++VRELF +A EHAPSI+F+D
Sbjct: 379 LIQKYLGDGPKLVRELFRVAE-----------------------------EHAPSIVFID 409
Query: 341 EIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
EID+IG+ R +S SGG+ E+QRTMLELLNQLDGF++
Sbjct: 410 EIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDS 445
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 354 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 398
>gi|449436203|ref|XP_004135883.1| PREDICTED: 26S protease regulatory subunit 7-like [Cucumis sativus]
gi|449491091|ref|XP_004158796.1| PREDICTED: 26S protease regulatory subunit 7-like [Cucumis sativus]
Length = 426
Score = 228 bits (580), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 133/312 (42%), Positives = 183/312 (58%), Gaps = 37/312 (11%)
Query: 73 DEAIKSSEGFKPY--YVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRM-LREELQLLQ 129
D A+ + G PY Y+ K+E+ +A+K +L ++ L A + L + Q++Q
Sbjct: 22 DIALLKTYGLGPYSTYIKKVEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQ 81
Query: 130 E----QGSYVGEVVKP-MDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYT 184
E Q + +++ P + K ++ V KFVV + + D+ RV + Y
Sbjct: 82 EEQPLQVARCTKIINPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQ 141
Query: 185 LHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQ 244
+ LP K+DP V++M VE+ PD TY VGG QI++++EV+ELP+ HPE F LGI
Sbjct: 142 IQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDP 201
Query: 245 PKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKK 304
PKGVL YGPPGTGKTLLARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 202 PKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKK 261
Query: 305 LAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTM 364
I+F DE+D+IG +R + G GGD+EVQRTM
Sbjct: 262 AC-----------------------------IVFFDEVDAIGGARFDDGVGGDNEVQRTM 292
Query: 365 LELLNQLDGFEA 376
LE++NQLDGF+A
Sbjct: 293 LEIVNQLDGFDA 304
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTLLARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 213 TGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSK 260
>gi|339239261|ref|XP_003381185.1| 26S protease regulatory subunit 4 [Trichinella spiralis]
gi|316975801|gb|EFV59199.1| 26S protease regulatory subunit 4 [Trichinella spiralis]
Length = 646
Score = 228 bits (580), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 115/242 (47%), Positives = 159/242 (65%), Gaps = 29/242 (11%)
Query: 135 VGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVD 194
VG + + +D +V + V I +D + + P C V L ++++++ +L + D
Sbjct: 315 VGTLEEVIDDTHAIVSTSVGSEHYVTILSFVDKDQLEPGCTVLLNHKTHSVIGVLTDDTD 374
Query: 195 PLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPP 254
P+VS+M +EK P TY VGGLDNQI+EIKE +ELP+ HPEL++ +GI PKGV+LYG P
Sbjct: 375 PMVSVMKLEKAPKETYADVGGLDNQIQEIKESVELPLTHPELYEEMGIRPPKGVILYGAP 434
Query: 255 GTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLF 314
GTGKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 435 GTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAE------------- 481
Query: 315 WSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGF 374
EHAPSI+F+DEID+IG+ R ES SGG+ E+QRTMLELLNQLDGF
Sbjct: 482 ----------------EHAPSIVFIDEIDAIGTKRYESNSGGEREIQRTMLELLNQLDGF 525
Query: 375 EA 376
++
Sbjct: 526 DS 527
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 436 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 480
>gi|408382733|ref|ZP_11180275.1| proteasome-activating nucleotidase [Methanobacterium formicicum DSM
3637]
gi|407814535|gb|EKF85160.1| proteasome-activating nucleotidase [Methanobacterium formicicum DSM
3637]
Length = 410
Score = 228 bits (580), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 116/270 (42%), Positives = 173/270 (64%), Gaps = 29/270 (10%)
Query: 107 LQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNID 166
++ ++ L+ +V+ LR E++ + + V + +D+ KV+VK FV+ + +D
Sbjct: 47 IENEKMRLDREVKSLRGEIERFRSPPLVIATVTEVLDEGKVVVKSSTGPHFVIGYSRFLD 106
Query: 167 INDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEV 226
+ P RVAL +++++ +LP++ DPLV+ M VE+ P+ +YE +GGL+ QI EIKE
Sbjct: 107 EKSLEPGARVALNQQTFSIVSVLPSEKDPLVTGMEVEEKPNVSYEKIGGLEEQIVEIKET 166
Query: 227 IELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFI 286
+ELP+K PELF +GI PKGVLLYGPPGTGKTLLA+AVAH T TFI++ SE V+K+I
Sbjct: 167 VELPLKKPELFTKIGIEPPKGVLLYGPPGTGKTLLAKAVAHETNATFIKIVASEFVKKYI 226
Query: 287 GEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIG 346
GEG+R+VR +F +A +E APSIIF+DEID+I
Sbjct: 227 GEGARLVRGVFELA-----------------------------KEKAPSIIFIDEIDAIA 257
Query: 347 SSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
+ R++S + GD EVQRT+++LL ++DGFE
Sbjct: 258 AKRLKSSTSGDREVQRTLMQLLAEMDGFEG 287
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 40/51 (78%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
+GKTLLA+AVAH T TFI++ SE V+K+IGEG+R+VR +F +A+ K S
Sbjct: 196 TGKTLLAKAVAHETNATFIKIVASEFVKKYIGEGARLVRGVFELAKEKAPS 246
>gi|410972650|ref|XP_003992771.1| PREDICTED: 26S protease regulatory subunit 4-like [Felis catus]
Length = 440
Score = 227 bits (579), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 121/276 (43%), Positives = 172/276 (62%), Gaps = 36/276 (13%)
Query: 101 EQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVD 160
++ ++ L+ ++ E +KV LR L VG + + +D +V + V
Sbjct: 82 QEQMKPLEEKQEEERSKVDDLRGTLM-------SVGTLEEIIDDNHAIVSTSVGSEHYVS 134
Query: 161 IDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQI 220
I +D + + P C V L ++ + + +L + DPLV++M VEK P TY +GGLDNQI
Sbjct: 135 ILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQI 194
Query: 221 KEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSE 280
+EIKE +ELP+ HPE ++ +GI PKGV+LYGPPGTGKTLLA+AVA+ T TF+RV GSE
Sbjct: 195 QEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSE 254
Query: 281 LVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMD 340
L+QK++G+G ++VRELF +A EHAPSI+F+D
Sbjct: 255 LIQKYLGDGPKLVRELFRVAE-----------------------------EHAPSIVFID 285
Query: 341 EIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
EID+IG+ R +S SGG+ E+QRTMLELLNQLDGF++
Sbjct: 286 EIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDS 321
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 230 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 274
>gi|403298191|ref|XP_003939915.1| PREDICTED: 26S protease regulatory subunit 4 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 367
Score = 227 bits (579), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 122/276 (44%), Positives = 169/276 (61%), Gaps = 29/276 (10%)
Query: 101 EQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVD 160
E+ R Q Q L K R ++ L+ VG + + +D +V + V
Sbjct: 2 EEEFIRNQEQMKPLEEKQEEERSKVDDLRGIPMSVGTLEEIIDDNHAIVSTSVGSEHYVS 61
Query: 161 IDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQI 220
I +D + + P C V L ++ + + +L + DPLV++M VEK P TY +GGLDNQI
Sbjct: 62 ILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQI 121
Query: 221 KEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSE 280
+EIKE +ELP+ HPE ++ +GI PKGV+LYGPPGTGKTLLA+AVA+ T TF+RV GSE
Sbjct: 122 QEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSE 181
Query: 281 LVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMD 340
L+QK++G+G ++VRELF +A EHAPSI+F+D
Sbjct: 182 LIQKYLGDGPKLVRELFRVAE-----------------------------EHAPSIVFID 212
Query: 341 EIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
EID+IG+ R +S SGG+ E+QRTMLELLNQLDGF++
Sbjct: 213 EIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDS 248
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 157 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 201
>gi|403298189|ref|XP_003939914.1| PREDICTED: 26S protease regulatory subunit 4 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 440
Score = 227 bits (579), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 122/276 (44%), Positives = 169/276 (61%), Gaps = 29/276 (10%)
Query: 101 EQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVD 160
E+ R Q Q L K R ++ L+ VG + + +D +V + V
Sbjct: 75 EEEFIRNQEQMKPLEEKQEEERSKVDDLRGIPMSVGTLEEIIDDNHAIVSTSVGSEHYVS 134
Query: 161 IDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQI 220
I +D + + P C V L ++ + + +L + DPLV++M VEK P TY +GGLDNQI
Sbjct: 135 ILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQI 194
Query: 221 KEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSE 280
+EIKE +ELP+ HPE ++ +GI PKGV+LYGPPGTGKTLLA+AVA+ T TF+RV GSE
Sbjct: 195 QEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSE 254
Query: 281 LVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMD 340
L+QK++G+G ++VRELF +A EHAPSI+F+D
Sbjct: 255 LIQKYLGDGPKLVRELFRVAE-----------------------------EHAPSIVFID 285
Query: 341 EIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
EID+IG+ R +S SGG+ E+QRTMLELLNQLDGF++
Sbjct: 286 EIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDS 321
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 230 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 274
>gi|219851580|ref|YP_002466012.1| proteasome-activating nucleotidase [Methanosphaerula palustris
E1-9c]
gi|254783493|sp|B8GGN4.1|PAN_METPE RecName: Full=Proteasome-activating nucleotidase; Short=PAN;
AltName: Full=Proteasomal ATPase; AltName:
Full=Proteasome regulatory ATPase; AltName:
Full=Proteasome regulatory particle
gi|219545839|gb|ACL16289.1| 26S proteasome subunit P45 family [Methanosphaerula palustris
E1-9c]
Length = 412
Score = 227 bits (578), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 122/284 (42%), Positives = 175/284 (61%), Gaps = 33/284 (11%)
Query: 91 EELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVK 150
E+L+ I A+K R L+ Q+ +VR + E++ ++ +G V +D+ +V+V+
Sbjct: 37 EQLRQIEADK----RYLETQKVRYEREVRKFKGEIEQMKSPPLVIGTVTDLIDENRVIVR 92
Query: 151 VHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTY 210
+F+V I ++++I ++ P R L +S + +ILP D + M V + P Y
Sbjct: 93 SSAGPRFLVGISQSLNIEEIKPGARCTLNQQSLAIVEILPTNYDAQIYGMEVIEAPSERY 152
Query: 211 EMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTE 270
E +GGL+ QI EI+E +ELP+K PE+F +GI PKGVLL+GPPGTGKTLLARAVAH TE
Sbjct: 153 EEIGGLEKQINEIREAVELPLKKPEVFRKMGIEPPKGVLLHGPPGTGKTLLARAVAHQTE 212
Query: 271 CTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFR 330
F+RV GSELVQK+IGEG+R+VRELF +A K
Sbjct: 213 AHFLRVVGSELVQKYIGEGARLVRELFELAKKK--------------------------- 245
Query: 331 EHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGF 374
+PSIIF+DEID+IG+SR ES + GD EV RT+++LL ++DGF
Sbjct: 246 --SPSIIFIDEIDAIGASRTESNTSGDREVHRTLMQLLAEMDGF 287
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/51 (70%), Positives = 43/51 (84%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
+GKTLLARAVAH TE F+RV GSELVQK+IGEG+R+VRELF +A+ K S
Sbjct: 198 TGKTLLARAVAHQTEAHFLRVVGSELVQKYIGEGARLVRELFELAKKKSPS 248
>gi|350536343|ref|NP_001232241.1| putative 26S ATPase complex subunit 4 [Taeniopygia guttata]
gi|197127956|gb|ACH44454.1| putative 26S ATPase complex subunit 4 [Taeniopygia guttata]
Length = 440
Score = 227 bits (578), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 122/276 (44%), Positives = 168/276 (60%), Gaps = 29/276 (10%)
Query: 101 EQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVD 160
E+ R Q Q L K R ++ L+ VG + + +D +V + V
Sbjct: 75 EEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVS 134
Query: 161 IDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQI 220
I +D + + P C V L ++ + + +L + DPLV++M VEK P TY +GGLDNQI
Sbjct: 135 ILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQI 194
Query: 221 KEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSE 280
+EIKE +ELP+ HPE ++ +GI PKGV+LYGPPGTGKTLLA+AVA+ T TF RV GSE
Sbjct: 195 QEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFXRVVGSE 254
Query: 281 LVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMD 340
L+QK++G+G ++VRELF +A EHAPSI+F+D
Sbjct: 255 LIQKYLGDGPKLVRELFRVAE-----------------------------EHAPSIVFID 285
Query: 341 EIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
EID+IG+ R +S SGG+ E+QRTMLELLNQLDGF++
Sbjct: 286 EIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDS 321
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 38/45 (84%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF RV GSEL+QK++G+G ++VRELF +A
Sbjct: 230 TGKTLLAKAVANQTSATFXRVVGSELIQKYLGDGPKLVRELFRVA 274
>gi|320168088|gb|EFW44987.1| proteasome 26S subunit [Capsaspora owczarzaki ATCC 30864]
Length = 449
Score = 227 bits (578), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 124/276 (44%), Positives = 174/276 (63%), Gaps = 37/276 (13%)
Query: 103 NLRRLQAQRNELNAKVRMLREELQLLQEQGS--YVGEVVKPMDKKKVLVKVHPEGKFVVD 160
N RL+ Q E N + R+ +EL+ GS VG + + +D +V +F V
Sbjct: 90 NQERLKPQ-EEKNQEERVKVDELR-----GSPMLVGTLEEIIDDSHAIVSSAIGPEFYVT 143
Query: 161 IDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQI 220
I +D + + P C V L N+ ++ +L + DP+V++M +EK P TY +GGLD+QI
Sbjct: 144 IMSFVDKDQLEPGCTVLLHNKLNSVIGVLADDADPMVNVMKIEKAPRETYADIGGLDSQI 203
Query: 221 KEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSE 280
+EIKE +ELP+ HPEL++ +GI PKGV+LYGPPGTGKTLLA+AVA+ T TF+RV GSE
Sbjct: 204 QEIKESVELPLTHPELYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSE 263
Query: 281 LVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMD 340
L+QK++G+G ++VRELF +A EHAPSI+F+D
Sbjct: 264 LIQKYLGDGPKLVRELFRVAE-----------------------------EHAPSIVFID 294
Query: 341 EIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
EID++G+ R +S SGG+ E+QRTMLELLNQLDGF+
Sbjct: 295 EIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDT 330
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 239 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 283
>gi|288560704|ref|YP_003424190.1| proteasome-activating nucleotidase [Methanobrevibacter ruminantium
M1]
gi|288543414|gb|ADC47298.1| proteasome-activating nucleotidase [Methanobrevibacter ruminantium
M1]
Length = 424
Score = 227 bits (578), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 125/309 (40%), Positives = 190/309 (61%), Gaps = 44/309 (14%)
Query: 83 KPYYVTKIE-ELQLIVAEKEQNLRRLQAQRNEL--------NAKVRMLRE------ELQL 127
+P V +++ EL L+ AE ++ R L + +L N K+R+ RE E++
Sbjct: 22 EPKTVDELQKELDLLKAENQKTKRNLMWKVRKLEKDKILTENEKIRLERELKSLRGEVER 81
Query: 128 LQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHK 187
+ + + + +D ++ VK F+++ K +D + + P RVAL +++ + +
Sbjct: 82 FRSPPLVIATITEIIDDSRMTVKSSTGPSFLINYSKFLDEDLLKPGSRVALNQQTFGVVE 141
Query: 188 ILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKG 247
+LP++ D VS M +E PD TY+M+GGLD QI E+KE +ELP+KHPELF+ +GI PKG
Sbjct: 142 VLPSEKDANVSGMEIEAKPDVTYDMIGGLDEQIIEVKETVELPLKHPELFEKVGIDPPKG 201
Query: 248 VLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAF 307
+LLYGPPGTGKTLLA+AVA+ T TFI+V SE V+K+IGEG+RMVRE+F +A
Sbjct: 202 ILLYGPPGTGKTLLAKAVANETNATFIKVVASEFVKKYIGEGARMVREVFELA------- 254
Query: 308 AHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLEL 367
+E APSIIF+DE+D++ + R++S + GD EVQRT+++L
Sbjct: 255 ----------------------KEKAPSIIFIDELDAVAAQRLKSSTSGDREVQRTLMQL 292
Query: 368 LNQLDGFEA 376
L +LDGFE+
Sbjct: 293 LAELDGFES 301
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 41/51 (80%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
+GKTLLA+AVA+ T TFI+V SE V+K+IGEG+RMVRE+F +A+ K S
Sbjct: 210 TGKTLLAKAVANETNATFIKVVASEFVKKYIGEGARMVREVFELAKEKAPS 260
>gi|11499558|ref|NP_070800.1| proteasome-activating nucleotidase [Archaeoglobus fulgidus DSM
4304]
gi|3122632|sp|O28303.1|PAN_ARCFU RecName: Full=Proteasome-activating nucleotidase; Short=PAN;
AltName: Full=Proteasomal ATPase; AltName:
Full=Proteasome regulatory ATPase; AltName:
Full=Proteasome regulatory particle
gi|2648566|gb|AAB89280.1| 26S protease regulatory subunit 4 [Archaeoglobus fulgidus DSM 4304]
Length = 398
Score = 227 bits (578), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 121/269 (44%), Positives = 169/269 (62%), Gaps = 29/269 (10%)
Query: 107 LQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNID 166
++++R +VR LR E++ L+ VG V ++ +V+VK KFVV+ + I+
Sbjct: 37 IESERIRYEREVRRLRSEVERLRSPPLLVGVVSDILEDGRVVVKSSTGPKFVVNTSQYIN 96
Query: 167 INDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEV 226
++ P RVAL ++ + +LP DP+V VE+ P+ +YE +GGLD QI+EI+E
Sbjct: 97 EEELKPGARVALNQQTLAIVNVLPTSKDPMVYGFEVEEKPEVSYEDIGGLDVQIEEIREA 156
Query: 227 IELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFI 286
+ELP+ PELF +GI PKGVLLYGPPGTGKTLLA+AVA+ T TFIRV GSE VQK+I
Sbjct: 157 VELPLLKPELFAEVGIEPPKGVLLYGPPGTGKTLLAKAVANQTRATFIRVVGSEFVQKYI 216
Query: 287 GEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIG 346
GEG+R+VRE+F +A +E APSIIF+DE+D+I
Sbjct: 217 GEGARLVREVFQLA-----------------------------KEKAPSIIFIDELDAIA 247
Query: 347 SSRIESGSGGDSEVQRTMLELLNQLDGFE 375
+ R S + GD EVQRTM++LL +LDGF+
Sbjct: 248 ARRTNSDTSGDREVQRTMMQLLAELDGFD 276
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 42/51 (82%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
+GKTLLA+AVA+ T TFIRV GSE VQK+IGEG+R+VRE+F +A+ K S
Sbjct: 186 TGKTLLAKAVANQTRATFIRVVGSEFVQKYIGEGARLVREVFQLAKEKAPS 236
>gi|327400885|ref|YP_004341724.1| proteasome-activating nucleotidase [Archaeoglobus veneficus SNP6]
gi|327316393|gb|AEA47009.1| Proteasome-activating nucleotidase [Archaeoglobus veneficus SNP6]
Length = 409
Score = 227 bits (578), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 119/275 (43%), Positives = 172/275 (62%), Gaps = 29/275 (10%)
Query: 101 EQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVD 160
E R ++++R +VR LR E++ L+ VG V + +V+VK KFVV
Sbjct: 41 EDEKRFVESERIRYEREVRRLRSEIERLRSPPLLVGVVSDVLSDGRVVVKSSTGPKFVVH 100
Query: 161 IDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQI 220
++I +++ P RVA+ ++ + ILP DP V +E+ P+ TY+ +GGL+ Q+
Sbjct: 101 ASQHISKDELRPGARVAMNQQTLAVVSILPPPKDPTVYGFEIEERPNVTYQDIGGLEKQV 160
Query: 221 KEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSE 280
+EI+E IELP+ P+LF+ +GI PKGVLLYGPPGTGKTLLA+AVAHHT+ TFIR+ GSE
Sbjct: 161 EEIREAIELPLLKPDLFEEVGIEPPKGVLLYGPPGTGKTLLAKAVAHHTQATFIRIVGSE 220
Query: 281 LVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMD 340
VQK+IGEG+R+VRE+F +A +E APSIIF+D
Sbjct: 221 FVQKYIGEGARLVREVFQLA-----------------------------KEKAPSIIFID 251
Query: 341 EIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
E+D+I + R S + GD EVQRT+++LL ++DGF+
Sbjct: 252 EVDAIAARRTSSDTSGDREVQRTLMQLLAEMDGFD 286
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 44/51 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
+GKTLLA+AVAHHT+ TFIR+ GSE VQK+IGEG+R+VRE+F +A+ K S
Sbjct: 196 TGKTLLAKAVAHHTQATFIRIVGSEFVQKYIGEGARLVREVFQLAKEKAPS 246
>gi|198413872|ref|XP_002128188.1| PREDICTED: similar to proteasome (prosome, macropain) 26S subunit,
ATPase 2 [Ciona intestinalis]
Length = 433
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 116/233 (49%), Positives = 148/233 (63%), Gaps = 29/233 (12%)
Query: 143 DKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMV 202
D K ++ V KFVVD+ + D+ RV + Y +H LP K+DP V++M V
Sbjct: 107 DNAKYIINVKQFAKFVVDLGDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQV 166
Query: 203 EKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 262
E+ PD TY VGG QI++++EV+E P+ HPE F LGI PKG+LL+GPPGTGKTL A
Sbjct: 167 EEKPDVTYSDVGGCKEQIQKLREVVETPLLHPERFITLGIDPPKGILLFGPPGTGKTLCA 226
Query: 263 RAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILT 322
RAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 227 RAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKK------------------ 268
Query: 323 NTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C +IF DEID+IG +R + G+GGD+EVQRTMLEL+NQLDGF+
Sbjct: 269 ---AC--------LIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFD 310
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 220 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTK 267
>gi|294932527|ref|XP_002780317.1| 26S protease regulatory subunit S10B, putative [Perkinsus marinus
ATCC 50983]
gi|239890239|gb|EER12112.1| 26S protease regulatory subunit S10B, putative [Perkinsus marinus
ATCC 50983]
Length = 398
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 121/290 (41%), Positives = 174/290 (60%), Gaps = 33/290 (11%)
Query: 86 YVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKK 145
Y++K++E + E+E + L+ Q E+ + L+ LQ G VGEV+K +D++
Sbjct: 21 YISKVKEHR----EREARCKELREQIKEVENDFETSEDHLKALQSVGQIVGEVLKQLDEE 76
Query: 146 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
+ +VK ++VV + +D +T RVAL + T+ K +P +VDPLV M+ E
Sbjct: 77 RFIVKASSGPRYVVTCKQRLDAAKLTTGTRVALDITTLTIMKAMPREVDPLVFSMLSEDP 136
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
+ Y VGGL+ QI+ ++EV+ELP+ +PELF +GI PKGVLLYGPPGTGKTLLARA+
Sbjct: 137 GEVRYSEVGGLNEQIRAMREVVELPLTNPELFKRVGINTPKGVLLYGPPGTGKTLLARAM 196
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTI 325
AH+ +FI+V S +V K+IGE +R++RE+F A
Sbjct: 197 AHNMTASFIKVVASAIVDKYIGESARVIREMFGYA------------------------- 231
Query: 326 VCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
+EH P IIFMDEID+IG R G+ D E+QRT++ELLNQLDGF+
Sbjct: 232 ----KEHQPCIIFMDEIDAIGGKRFGQGTSADREIQRTLMELLNQLDGFD 277
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 36/46 (78%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARA+AH+ +FI+V S +V K+IGE +R++RE+F A+
Sbjct: 187 TGKTLLARAMAHNMTASFIKVVASAIVDKYIGESARVIREMFGYAK 232
>gi|332019605|gb|EGI60083.1| 26S protease regulatory subunit 7 [Acromyrmex echinatior]
Length = 434
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 117/233 (50%), Positives = 150/233 (64%), Gaps = 29/233 (12%)
Query: 143 DKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMV 202
D K ++ V KFVVD+ ++ D+ RV + Y +H LP+K+DP V++M V
Sbjct: 108 DDPKYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPSKIDPTVTMMQV 167
Query: 203 EKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 262
E+ PD TY VGG QI++++EV+E P+ HPE F LGI PKGVLL+GPPGTGKTL A
Sbjct: 168 EEKPDVTYSDVGGCKEQIEKLREVVETPLLHPEKFVNLGIEPPKGVLLFGPPGTGKTLCA 227
Query: 263 RAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILT 322
RAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 228 RAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARSKK------------------ 269
Query: 323 NTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C +IF DEID+IG +R + G+GGD+EVQRTMLEL+NQLDGF+
Sbjct: 270 ---AC--------LIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFD 311
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 221 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARSK 268
>gi|115948410|ref|XP_794594.2| PREDICTED: LOW QUALITY PROTEIN: 26S protease regulatory subunit
7-like, partial [Strongylocentrotus purpuratus]
Length = 409
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 117/230 (50%), Positives = 147/230 (63%), Gaps = 29/230 (12%)
Query: 146 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
K ++ V KFVVD+ N+ D+ RV + Y +H LP K+DP V++M VE+
Sbjct: 86 KYIINVKQFAKFVVDLHDNVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEK 145
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
PD TY +GG QI +++EV+E P+ HPE F LGI PKGVLLYGPPGTGKTL ARAV
Sbjct: 146 PDVTYSDIGGCKEQIDKLREVVETPLLHPERFVNLGIEPPKGVLLYGPPGTGKTLCARAV 205
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTI 325
A+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 206 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARGKK--------------------- 244
Query: 326 VCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C +IF DEID+IG +R + G+GGD+EVQRTMLEL+NQLDGF+
Sbjct: 245 AC--------LIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFD 286
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 196 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARGK 243
>gi|322799608|gb|EFZ20880.1| hypothetical protein SINV_01171 [Solenopsis invicta]
Length = 434
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 117/233 (50%), Positives = 150/233 (64%), Gaps = 29/233 (12%)
Query: 143 DKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMV 202
D K ++ V KFVVD+ ++ D+ RV + Y +H LP+K+DP V++M V
Sbjct: 108 DDPKYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPSKIDPTVTMMQV 167
Query: 203 EKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 262
E+ PD TY VGG QI++++EV+E P+ HPE F LGI PKGVLL+GPPGTGKTL A
Sbjct: 168 EEKPDVTYSDVGGCKEQIEKLREVVETPLLHPEKFVNLGIEPPKGVLLFGPPGTGKTLCA 227
Query: 263 RAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILT 322
RAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 228 RAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARSKK------------------ 269
Query: 323 NTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C +IF DEID+IG +R + G+GGD+EVQRTMLEL+NQLDGF+
Sbjct: 270 ---AC--------LIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFD 311
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 221 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARSK 268
>gi|432950932|ref|XP_004084680.1| PREDICTED: 26S protease regulatory subunit 7-like [Oryzias latipes]
Length = 433
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 116/230 (50%), Positives = 148/230 (64%), Gaps = 29/230 (12%)
Query: 146 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
K ++ V KFVVD+ + D+ RV + Y +H LP K+DP V++M VE+
Sbjct: 110 KYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEK 169
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
PD TY VGG QI++++EV+E P+ HPE F +LGI PKGVLL+GPPGTGKTL ARAV
Sbjct: 170 PDVTYSDVGGCKEQIEKLREVVETPLLHPERFVSLGIEPPKGVLLFGPPGTGKTLCARAV 229
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTI 325
A+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 230 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKK--------------------- 268
Query: 326 VCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C +IF DEID+IG +R + G+GGD+EVQRTMLEL+NQLDGF+
Sbjct: 269 AC--------LIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFD 310
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 220 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTK 267
>gi|225711196|gb|ACO11444.1| 26S protease regulatory subunit 7 [Caligus rogercresseyi]
Length = 435
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 115/233 (49%), Positives = 149/233 (63%), Gaps = 29/233 (12%)
Query: 143 DKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMV 202
D + ++ V KFVVD+ +++ D+ RV + Y +H LP K+DP+V++M V
Sbjct: 109 DNPQYIINVKQFAKFVVDLAESVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPIVTMMQV 168
Query: 203 EKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 262
E+ PD TY VGG QI++++EV+E P+ HPE F LGI PKGVLLYGPPGTGKTL A
Sbjct: 169 EEKPDVTYGDVGGCKEQIEKLREVVETPLIHPERFVNLGIEPPKGVLLYGPPGTGKTLCA 228
Query: 263 RAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILT 322
RAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK F
Sbjct: 229 RAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACF--------------- 273
Query: 323 NTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
IF DEID++G +R + G+GGD+EVQRTMLE +NQLDGF+
Sbjct: 274 --------------IFFDEIDAVGGARYDDGAGGDNEVQRTMLEFINQLDGFD 312
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 222 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTK 269
>gi|321476874|gb|EFX87834.1| hypothetical protein DAPPUDRAFT_306359 [Daphnia pulex]
Length = 434
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 117/233 (50%), Positives = 149/233 (63%), Gaps = 29/233 (12%)
Query: 143 DKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMV 202
D K ++ V KFVVD+ ++ D+ RV + Y +H LP K+DP V++M V
Sbjct: 108 DDPKYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQV 167
Query: 203 EKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 262
E+ PD TY VGG QI++++EV+E P+ HPE F LGI PKGVLL+GPPGTGKTL A
Sbjct: 168 EEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCA 227
Query: 263 RAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILT 322
RAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 228 RAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKK------------------ 269
Query: 323 NTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C +IF DEID+IG +R + G+GGD+EVQRTMLEL+NQLDGF+
Sbjct: 270 ---AC--------LIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFD 311
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 221 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTK 268
>gi|307197198|gb|EFN78520.1| 26S protease regulatory subunit 7 [Harpegnathos saltator]
Length = 434
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 117/233 (50%), Positives = 150/233 (64%), Gaps = 29/233 (12%)
Query: 143 DKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMV 202
D K ++ V KFVVD+ ++ D+ RV + Y +H LP+K+DP V++M V
Sbjct: 108 DDPKYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPSKIDPTVTMMQV 167
Query: 203 EKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 262
E+ PD TY VGG QI++++EV+E P+ HPE F LGI PKGVLL+GPPGTGKTL A
Sbjct: 168 EEKPDVTYSDVGGCKEQIEKLREVVETPLLHPEKFVNLGIEPPKGVLLFGPPGTGKTLCA 227
Query: 263 RAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILT 322
RAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 228 RAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARSKK------------------ 269
Query: 323 NTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C +IF DEID+IG +R + G+GGD+EVQRTMLEL+NQLDGF+
Sbjct: 270 ---AC--------LIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFD 311
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 221 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARSK 268
>gi|307172188|gb|EFN63713.1| 26S protease regulatory subunit 7 [Camponotus floridanus]
Length = 434
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 117/233 (50%), Positives = 150/233 (64%), Gaps = 29/233 (12%)
Query: 143 DKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMV 202
D K ++ V KFVVD+ ++ D+ RV + Y +H LP+K+DP V++M V
Sbjct: 108 DDPKYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPSKIDPTVTMMQV 167
Query: 203 EKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 262
E+ PD TY VGG QI++++EV+E P+ HPE F LGI PKGVLL+GPPGTGKTL A
Sbjct: 168 EEKPDVTYSDVGGCKEQIEKLREVVETPLLHPEKFVNLGIEPPKGVLLFGPPGTGKTLCA 227
Query: 263 RAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILT 322
RAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 228 RAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARSKK------------------ 269
Query: 323 NTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C +IF DEID+IG +R + G+GGD+EVQRTMLEL+NQLDGF+
Sbjct: 270 ---AC--------LIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFD 311
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 221 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARSK 268
>gi|302806994|ref|XP_002985228.1| hypothetical protein SELMODRAFT_181466 [Selaginella moellendorffii]
gi|300147056|gb|EFJ13722.1| hypothetical protein SELMODRAFT_181466 [Selaginella moellendorffii]
Length = 428
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 132/312 (42%), Positives = 182/312 (58%), Gaps = 37/312 (11%)
Query: 73 DEAIKSSEGFKPYYVT--KIEELQLIVAEKEQNLRRLQAQRNELNAKVRM-LREELQLLQ 129
D A+ + G PY + K+E+ +A+K +L ++ L A + L + Q++Q
Sbjct: 24 DIALLKTYGLGPYATSTKKVEKEIKELAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQ 83
Query: 130 E----QGSYVGEVVKP-MDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYT 184
E Q + +++ P D K ++ V KFVV + + D+ RV + Y
Sbjct: 84 EEQPLQVARCTKIINPGADDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQ 143
Query: 185 LHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQ 244
+ LP K+DP V++M VE+ PD TY +GG QI++++EV+ELP+ HPE F LGI
Sbjct: 144 IQIPLPPKIDPSVTMMTVEEKPDVTYNDIGGCKEQIEKMREVVELPMLHPEKFIKLGIDP 203
Query: 245 PKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKK 304
PKGVL YGPPGTGKTLLARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 204 PKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKK 263
Query: 305 LAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTM 364
I+F DE+D+IG +R + G GGD+EVQRTM
Sbjct: 264 AC-----------------------------IVFFDEVDAIGGARFDDGIGGDNEVQRTM 294
Query: 365 LELLNQLDGFEA 376
LE++NQLDGF+A
Sbjct: 295 LEIVNQLDGFDA 306
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTLLARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 215 TGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSK 262
>gi|29825445|gb|AAO92283.1| 26S proteasome regulatory subunit [Dermacentor variabilis]
Length = 402
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 123/297 (41%), Positives = 174/297 (58%), Gaps = 33/297 (11%)
Query: 80 EGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVV 139
E ++ Y K+ E + E E L+ ++ Q ELN + +L+ LQ G VGEV+
Sbjct: 19 EKYREDYRKKLTEHK----EVESRLKEMREQLKELNKQYEKSENDLKALQSVGQIVGEVL 74
Query: 140 KPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSL 199
K + ++K +VK ++VV + +D + P RVAL + T+ + LP +VDPLV
Sbjct: 75 KQLTEEKFIVKATNGPRYVVGCRRQLDKAKLKPGTRVALDMTTLTIMRYLPREVDPLVYN 134
Query: 200 MMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKT 259
M E + +Y M+GGL QI+E++EVIELP+ +PELF +GI PKG LLYGPPGTGKT
Sbjct: 135 MSHEDPGNISYSMIGGLAEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKT 194
Query: 260 LLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLT 319
LLARAVA E F++V S +V K+IGE +R++RE+F A
Sbjct: 195 LLARAVASQIEANFLKVVSSAIVDKYIGESARLIREMFNYA------------------- 235
Query: 320 ILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
R+H P +IFMDEID+IG R G+ D E+QRT++ELLNQ+DGF++
Sbjct: 236 ----------RDHQPCVIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDS 282
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 34/46 (73%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA E F++V S +V K+IGE +R++RE+F AR
Sbjct: 191 TGKTLLARAVASQIEANFLKVVSSAIVDKYIGESARLIREMFNYAR 236
>gi|302773239|ref|XP_002970037.1| hypothetical protein SELMODRAFT_146742 [Selaginella moellendorffii]
gi|300162548|gb|EFJ29161.1| hypothetical protein SELMODRAFT_146742 [Selaginella moellendorffii]
Length = 428
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 132/312 (42%), Positives = 182/312 (58%), Gaps = 37/312 (11%)
Query: 73 DEAIKSSEGFKPYYVT--KIEELQLIVAEKEQNLRRLQAQRNELNAKVRM-LREELQLLQ 129
D A+ + G PY + K+E+ +A+K +L ++ L A + L + Q++Q
Sbjct: 24 DIALLKTYGLGPYATSTKKVEKEIKELAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQ 83
Query: 130 E----QGSYVGEVVKP-MDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYT 184
E Q + +++ P D K ++ V KFVV + + D+ RV + Y
Sbjct: 84 EEQPLQVARCTKIINPGADDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQ 143
Query: 185 LHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQ 244
+ LP K+DP V++M VE+ PD TY +GG QI++++EV+ELP+ HPE F LGI
Sbjct: 144 IQIPLPPKIDPSVTMMTVEEKPDVTYNDIGGCKEQIEKMREVVELPMLHPEKFIKLGIDP 203
Query: 245 PKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKK 304
PKGVL YGPPGTGKTLLARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 204 PKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKK 263
Query: 305 LAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTM 364
I+F DE+D+IG +R + G GGD+EVQRTM
Sbjct: 264 AC-----------------------------IVFFDEVDAIGGARFDDGIGGDNEVQRTM 294
Query: 365 LELLNQLDGFEA 376
LE++NQLDGF+A
Sbjct: 295 LEIVNQLDGFDA 306
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTLLARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 215 TGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSK 262
>gi|209876752|ref|XP_002139818.1| 26S proteasome regulatory subunit S10B [Cryptosporidium muris RN66]
gi|209555424|gb|EEA05469.1| 26S proteasome regulatory subunit S10B, putative [Cryptosporidium
muris RN66]
Length = 391
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 117/275 (42%), Positives = 164/275 (59%), Gaps = 29/275 (10%)
Query: 101 EQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVD 160
E L++ + + EL+ E L+ LQ G +GEV++ +D +K +VK ++VV
Sbjct: 25 EVKLKKKRLEIKELSKNYEKTEENLRALQSVGQIIGEVLRQLDNEKCIVKASTGPRYVVG 84
Query: 161 IDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQI 220
+D + RVAL + T+ +ILP +VDP+V M+ E TY VGGL+ QI
Sbjct: 85 CRSKLDRKKLVSGTRVALDATTLTIMRILPREVDPMVYNMLHEDPGSVTYSQVGGLNEQI 144
Query: 221 KEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSE 280
+EI+EV+ELP+ +PELF +GI PKGVLLYGPPGTGKTLLARA+A C+F++V S
Sbjct: 145 REIREVVELPLTNPELFKRVGIKTPKGVLLYGPPGTGKTLLARAMASSMSCSFMKVVASA 204
Query: 281 LVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMD 340
+V K+IGE +R++RE+F A +EH P +IFMD
Sbjct: 205 IVDKYIGESARVIREMFGYA-----------------------------KEHQPCVIFMD 235
Query: 341 EIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
EID+IG R G+ D E+QRT++ELLNQLDGF+
Sbjct: 236 EIDAIGGKRFSQGTSADREIQRTLMELLNQLDGFD 270
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 35/46 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARA+A C+F++V S +V K+IGE +R++RE+F A+
Sbjct: 180 TGKTLLARAMASSMSCSFMKVVASAIVDKYIGESARVIREMFGYAK 225
>gi|432329083|ref|YP_007247227.1| 26S proteasome subunit P45 family [Aciduliprofundum sp. MAR08-339]
gi|432135792|gb|AGB05061.1| 26S proteasome subunit P45 family [Aciduliprofundum sp. MAR08-339]
Length = 395
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 117/285 (41%), Positives = 174/285 (61%), Gaps = 29/285 (10%)
Query: 91 EELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVK 150
EELQ V E R L+A+ L ++ LR+E+ ++ VG + +D K++V+
Sbjct: 19 EELQRQVRILEDEKRYLEAELRRLQGEIERLRKEINRMKTPPLLVGTIEDVIDDNKIVVR 78
Query: 151 VHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTY 210
F+V++ + + P +VAL +++ + ++P DP ++ + + P+ TY
Sbjct: 79 SSAGPTFIVNVSSYVPRESIKPGAKVALNKQTFAIVHMIPESYDPSIAAAEIIEKPNVTY 138
Query: 211 EMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTE 270
+ +GGLD QI+EI+E +ELP+ PEL+ +GI PKGVLL GPPGTGKTLLA+AVAHHT
Sbjct: 139 DDIGGLDKQIREIREAVELPLLKPELYKKVGIEPPKGVLLAGPPGTGKTLLAKAVAHHTH 198
Query: 271 CTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFR 330
TFIR GSELV+K+IGEG+++VRELF +A R
Sbjct: 199 ATFIRTVGSELVRKYIGEGAKLVRELFDLA-----------------------------R 229
Query: 331 EHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
+ APSI+F+DEID+IG+ R++ + GD EVQRT+++LL +LDGFE
Sbjct: 230 KKAPSIVFIDEIDAIGARRLDMATSGDREVQRTLMQLLAELDGFE 274
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/51 (68%), Positives = 43/51 (84%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
+GKTLLA+AVAHHT TFIR GSELV+K+IGEG+++VRELF +AR K S
Sbjct: 184 TGKTLLAKAVAHHTHATFIRTVGSELVRKYIGEGAKLVRELFDLARKKAPS 234
>gi|449683560|ref|XP_004210394.1| PREDICTED: 26S protease regulatory subunit 7-like [Hydra
magnipapillata]
Length = 435
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 117/233 (50%), Positives = 147/233 (63%), Gaps = 29/233 (12%)
Query: 143 DKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMV 202
D + ++ V KFVVD+ + D+ RV + Y +H LP K+DP V++M V
Sbjct: 109 DDPQYIINVKQFAKFVVDLGDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQV 168
Query: 203 EKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 262
E+ PD TY VGG QI +++EV+E P+ HPE F LGI PKGVLLYGPPGTGKTL A
Sbjct: 169 EEKPDVTYADVGGCKEQIDKLREVVETPLLHPERFINLGIDPPKGVLLYGPPGTGKTLCA 228
Query: 263 RAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILT 322
RAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 229 RAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARSKK------------------ 270
Query: 323 NTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C IIF DEID++G +R + G+GGD+EVQRTMLEL+NQLDGF+
Sbjct: 271 ---AC--------IIFFDEIDAVGGARFDDGAGGDNEVQRTMLELINQLDGFD 312
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 222 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARSK 269
>gi|45384432|ref|NP_990289.1| 26S protease regulatory subunit 4 [Gallus gallus]
gi|2492516|sp|Q90732.1|PRS4_CHICK RecName: Full=26S protease regulatory subunit 4; Short=P26s4;
AltName: Full=26S proteasome AAA-ATPase subunit RPT2;
AltName: Full=Proteasome 26S subunit ATPase 1
gi|1399943|gb|AAC60013.1| 26S ATPase complex subunit 4 [Gallus gallus]
Length = 440
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 120/276 (43%), Positives = 168/276 (60%), Gaps = 29/276 (10%)
Query: 101 EQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVD 160
E+ R Q Q L K R ++ L+ VG + + +D +V + V
Sbjct: 75 EEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVS 134
Query: 161 IDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQI 220
I +D + + P C V L ++ + + +L + DPLV++M +EK P TY +GGLDNQI
Sbjct: 135 ILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKLEKAPQETYADIGGLDNQI 194
Query: 221 KEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSE 280
+EIKE +ELP+ HPE ++ +GI PKGV+LYGPPGTGKTLLA+AVA+ T TF+RV GSE
Sbjct: 195 QEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSE 254
Query: 281 LVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMD 340
L+QK++G+G ++VRELF +A EH PSI+F+D
Sbjct: 255 LIQKYLGDGPKLVRELFRVAE-----------------------------EHGPSIVFID 285
Query: 341 EIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
EID+IG+ R +S SGG+ E+QRTMLELLNQLDGF++
Sbjct: 286 EIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDS 321
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 41/51 (80%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A G S
Sbjct: 230 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHGPS 280
>gi|449016634|dbj|BAM80036.1| 26S proteasome ATP-dependent regulatory subunit [Cyanidioschyzon
merolae strain 10D]
Length = 425
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 128/308 (41%), Positives = 183/308 (59%), Gaps = 41/308 (13%)
Query: 79 SEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVR------MLREELQLLQEQG 132
S G PY +I++L+ + E +N+ L R EL+ + ++ ++ + +EQ
Sbjct: 27 SYGLGPYS-NRIKQLEKEIEECTKNIDELVGVR-ELDTGLAAPSSWDLVADKQAMQEEQP 84
Query: 133 SYVGEVVKPMD----KKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKI 188
V K +D + K ++ + K+VV + + + D+ RV + + +
Sbjct: 85 LQVARCTKIIDEGAERAKYVINIRQIAKYVVGLGERVAPTDIEEGMRVGVDRNKFQIQLP 144
Query: 189 LPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGV 248
LP ++DP V++M VE+ PD TY +GG+ QI+ I+EV+ELP+ HPE F LGI PKGV
Sbjct: 145 LPPRIDPSVTMMTVEEKPDVTYADIGGVKEQIERIREVVELPLLHPERFIELGIDPPKGV 204
Query: 249 LLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFA 308
LLYGPPGTGKTLLARAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF +A K+ A
Sbjct: 205 LLYGPPGTGKTLLARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFQLARSKRAA-- 262
Query: 309 HHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELL 368
I+F DE+D+IG +R + G GGD+EVQRTMLE++
Sbjct: 263 ---------------------------IVFFDEVDAIGGARYDDGQGGDNEVQRTMLEIV 295
Query: 369 NQLDGFEA 376
NQLDGF+A
Sbjct: 296 NQLDGFDA 303
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/51 (70%), Positives = 45/51 (88%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
+GKTLLARAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF +AR K ++
Sbjct: 212 TGKTLLARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFQLARSKRAA 262
>gi|390179732|ref|XP_003736959.1| GA12266 [Drosophila pseudoobscura pseudoobscura]
gi|388859948|gb|EIM53032.1| GA12266 [Drosophila pseudoobscura pseudoobscura]
Length = 433
Score = 225 bits (574), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 125/260 (48%), Positives = 159/260 (61%), Gaps = 34/260 (13%)
Query: 121 LREELQLLQ-EQGSYVGEVVKPM----DKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCR 175
L + Q+LQ EQ V K + D K ++ V KFVVD+ ++ D+ R
Sbjct: 80 LAADKQILQNEQPLQVARCTKIINADSDDPKYIINVKQFAKFVVDLADSVATTDIEEGMR 139
Query: 176 VALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPE 235
V + Y +H LP K+DP V++M VE PD TY VGG QI++++EV+E P+ HPE
Sbjct: 140 VGVDRNKYQIHIPLPPKIDPTVTMMQVEDKPDVTYSDVGGCKEQIEKLREVVETPLLHPE 199
Query: 236 LFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRE 295
F LGI PKGVLL+GPPGTGKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRE
Sbjct: 200 KFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRE 259
Query: 296 LFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSG 355
LF MA KK C +IF DEID+IG +R + G+G
Sbjct: 260 LFEMARSKK---------------------AC--------LIFFDEIDAIGGARFDDGAG 290
Query: 356 GDSEVQRTMLELLNQLDGFE 375
GD+EVQRTMLEL+NQLDGF+
Sbjct: 291 GDNEVQRTMLELINQLDGFD 310
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 220 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARSK 267
>gi|224088623|ref|XP_002308501.1| predicted protein [Populus trichocarpa]
gi|222854477|gb|EEE92024.1| predicted protein [Populus trichocarpa]
Length = 429
Score = 225 bits (574), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 135/312 (43%), Positives = 185/312 (59%), Gaps = 37/312 (11%)
Query: 73 DEAIKSSEGFKPYYVT-KIEELQL-IVAEKEQNLRRLQAQRNELNAKVRM-LREELQLLQ 129
D A+ + G PY + K EE ++ +A+K +LR ++ L A + L + Q++Q
Sbjct: 25 DIALLKTYGLGPYSNSIKKEEKEIKDLAKKINDLRGIKESDTGLAAPSQWDLVSDKQMMQ 84
Query: 130 E----QGSYVGEVVKP-MDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYT 184
E Q + +++ P + K ++ V KFVV + + D+ RV + Y
Sbjct: 85 EEQPLQVARCTKIINPNTEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQ 144
Query: 185 LHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQ 244
+ LP K+DP V++M VE+ PD TY VGG QI++++EV+ELP+ HPE F LGI
Sbjct: 145 IQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDP 204
Query: 245 PKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKK 304
PKGVL YGPPGTGKTLLARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 205 PKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKK 264
Query: 305 LAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTM 364
C I+F DE+D+IG +R + G GGD+EVQRTM
Sbjct: 265 ---------------------AC--------IVFFDEVDAIGGARFDDGVGGDNEVQRTM 295
Query: 365 LELLNQLDGFEA 376
LE++NQLDGF+A
Sbjct: 296 LEIVNQLDGFDA 307
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTLLARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 216 TGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSK 263
>gi|91088885|ref|XP_972389.1| PREDICTED: similar to Rpt1 CG1341-PA [Tribolium castaneum]
gi|270012350|gb|EFA08798.1| hypothetical protein TcasGA2_TC006492 [Tribolium castaneum]
Length = 434
Score = 225 bits (574), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 117/233 (50%), Positives = 149/233 (63%), Gaps = 29/233 (12%)
Query: 143 DKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMV 202
D K ++ V KFVVD+ ++ D+ RV + Y +H LP K+DP V++M V
Sbjct: 108 DDPKYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQV 167
Query: 203 EKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 262
E+ PD TY VGG QI++++EV+E P+ HPE F LGI PKGVLL+GPPGTGKTL A
Sbjct: 168 EEKPDVTYSDVGGCKEQIEKLREVVETPLLHPEKFVKLGIEPPKGVLLFGPPGTGKTLCA 227
Query: 263 RAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILT 322
RAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 228 RAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARSKK------------------ 269
Query: 323 NTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C +IF DEID+IG +R + G+GGD+EVQRTMLEL+NQLDGF+
Sbjct: 270 ---AC--------LIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFD 311
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 221 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARSK 268
>gi|212224536|ref|YP_002307772.1| proteasome-activating nucleotidase [Thermococcus onnurineus NA1]
gi|226723242|sp|B6YXR2.1|PAN_THEON RecName: Full=Proteasome-activating nucleotidase; Short=PAN;
AltName: Full=Proteasomal ATPase; AltName:
Full=Proteasome regulatory ATPase; AltName:
Full=Proteasome regulatory particle
gi|212009493|gb|ACJ16875.1| proteasome-activating nucleotidase [Thermococcus onnurineus NA1]
Length = 398
Score = 225 bits (574), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 125/308 (40%), Positives = 190/308 (61%), Gaps = 39/308 (12%)
Query: 73 DEAIKSSEGFKPY--YVTK-IEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQ 129
D IK SE + Y Y+ K I +L+L V R L+A + L ++ LR E+ L+
Sbjct: 5 DVGIKPSEEYDDYIMYLKKRIRQLELQV-------RTLEADKERLERELSRLRMEMSRLR 57
Query: 130 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKIL 189
+ ++ G +++ +D+ + +V+ + +FVV I I+ ++ P RVAL + + ++L
Sbjct: 58 QPPAFAGTLIELLDEDRAIVQNYNGPRFVVRIAPWIERENLKPGARVALDQRTMAIVELL 117
Query: 190 PNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVL 249
P++ DP V V + P +Y +GGLD Q++E++E IELP+KHPELF+ +GI PKGVL
Sbjct: 118 PSEKDPSVLGFEVIERPTVSYNDIGGLDKQLQELREAIELPLKHPELFEKVGIEPPKGVL 177
Query: 250 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAH 309
LYGPPG GKTL+A+A+AH TFIRV GSELV+KFIGEG+R+V ELF +A
Sbjct: 178 LYGPPGCGKTLMAKALAHEVNATFIRVVGSELVRKFIGEGARLVHELFELA--------- 228
Query: 310 HPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN 369
+E AP+IIF+DEID+IG+ R++ +GG+ EV RT+++LL
Sbjct: 229 --------------------KEKAPAIIFIDEIDAIGAKRMDETTGGEREVNRTLMQLLA 268
Query: 370 QLDGFEAT 377
++DGF+ +
Sbjct: 269 EMDGFDPS 276
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 40/50 (80%)
Query: 13 GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
GKTL+A+A+AH TFIRV GSELV+KFIGEG+R+V ELF +A+ K +
Sbjct: 185 GKTLMAKALAHEVNATFIRVVGSELVRKFIGEGARLVHELFELAKEKAPA 234
>gi|350419438|ref|XP_003492182.1| PREDICTED: 26S protease regulatory subunit 7-like [Bombus
impatiens]
Length = 434
Score = 225 bits (573), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 117/233 (50%), Positives = 149/233 (63%), Gaps = 29/233 (12%)
Query: 143 DKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMV 202
D K ++ V KFVVD+ ++ D+ RV + Y +H LP K+DP V++M V
Sbjct: 108 DDPKYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQV 167
Query: 203 EKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 262
E+ PD TY VGG QI++++EV+E P+ HPE F LGI PKGVLL+GPPGTGKTL A
Sbjct: 168 EEKPDVTYSDVGGCKEQIEKLREVVETPLLHPEKFVNLGIEPPKGVLLFGPPGTGKTLCA 227
Query: 263 RAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILT 322
RAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 228 RAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARSKK------------------ 269
Query: 323 NTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C +IF DEID+IG +R + G+GGD+EVQRTMLEL+NQLDGF+
Sbjct: 270 ---AC--------LIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFD 311
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 221 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARSK 268
>gi|74147276|dbj|BAE27531.1| unnamed protein product [Mus musculus]
Length = 433
Score = 225 bits (573), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 116/230 (50%), Positives = 147/230 (63%), Gaps = 29/230 (12%)
Query: 146 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
K ++ V KFVVD+ + D+ RV + Y +H LP K+DP V++M VE+
Sbjct: 110 KYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEK 169
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
PD TY VGG QI++++EV+E P+ HPE F LGI PKGVLL+GPPGTGKTL ARAV
Sbjct: 170 PDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 229
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTI 325
A+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 230 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKK--------------------- 268
Query: 326 VCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C +IF DEID+IG +R + G+GGD+EVQRTMLEL+NQLDGF+
Sbjct: 269 AC--------LIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFD 310
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 220 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTK 267
>gi|167524855|ref|XP_001746763.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775033|gb|EDQ88659.1| predicted protein [Monosiga brevicollis MX1]
Length = 437
Score = 225 bits (573), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 132/304 (43%), Positives = 178/304 (58%), Gaps = 37/304 (12%)
Query: 75 AIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREE--LQLLQEQG 132
AIK +E + KI+E+ I KE + +L A +M+ EE LQ+ +
Sbjct: 47 AIKDAEKDVNTRLKKIKEMTGI---KESDTGLAHPSLWDLAADKQMMSEEHPLQVARCTK 103
Query: 133 SYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNK 192
G+ D+ K L+ + KFVV + + + D+ RV + Y +H LP K
Sbjct: 104 IMAGDT---EDENKYLIHIKQIAKFVVALHEKVAPTDIEEGMRVGVDRTKYQIHIPLPPK 160
Query: 193 VDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYG 252
+D V++M VE PD TY VGG QI++++EV+ELP+ HPE F LGI PKG+LLYG
Sbjct: 161 IDASVTMMQVEDKPDVTYADVGGCKEQIQKLREVVELPLLHPERFVDLGIDPPKGILLYG 220
Query: 253 PPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPL 312
PPGTGKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRE+F +A KK A
Sbjct: 221 PPGTGKTLCARAVANRTDAAFIRVIGSELVQKYVGEGARMVREIFELARTKKAA------ 274
Query: 313 LFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLD 372
IIF DE+D+IG +R++ G+GGD+EVQRTMLEL+ QLD
Sbjct: 275 -----------------------IIFFDEVDAIGGARVDDGAGGDNEVQRTMLELITQLD 311
Query: 373 GFEA 376
GF+A
Sbjct: 312 GFDA 315
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 43/51 (84%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRE+F +AR K ++
Sbjct: 224 TGKTLCARAVANRTDAAFIRVIGSELVQKYVGEGARMVREIFELARTKKAA 274
>gi|33859604|ref|NP_035318.1| 26S protease regulatory subunit 7 [Mus musculus]
gi|26345730|dbj|BAC36516.1| unnamed protein product [Mus musculus]
Length = 475
Score = 225 bits (573), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 116/230 (50%), Positives = 147/230 (63%), Gaps = 29/230 (12%)
Query: 146 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
K ++ V KFVVD+ + D+ RV + Y +H LP K+DP V++M VE+
Sbjct: 152 KYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEK 211
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
PD TY VGG QI++++EV+E P+ HPE F LGI PKGVLL+GPPGTGKTL ARAV
Sbjct: 212 PDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 271
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTI 325
A+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 272 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKK--------------------- 310
Query: 326 VCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C +IF DEID+IG +R + G+GGD+EVQRTMLEL+NQLDGF+
Sbjct: 311 AC--------LIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFD 352
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 262 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTK 309
>gi|409108336|gb|AFV13466.1| 26S protease regulatory subunit 7 [Coix lacryma-jobi]
Length = 426
Score = 225 bits (573), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 133/312 (42%), Positives = 181/312 (58%), Gaps = 37/312 (11%)
Query: 73 DEAIKSSEGFKPYY--VTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRM-LREELQLLQ 129
D A+ + G PY + K+E+ +A+K +L ++ L + L + Q++Q
Sbjct: 22 DIALLKTYGLGPYSTSIKKVEKELKELAKKINDLCGIKESDTGLAPPSQWDLVSDKQMMQ 81
Query: 130 E----QGSYVGEVVKP-MDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYT 184
E Q + +++ P D K L+ V KFVV + + D+ RV + Y
Sbjct: 82 EEQPLQVARCTKIISPNTDDAKYLINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQ 141
Query: 185 LHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQ 244
+ LP K+DP V++M VE+ PD TY VGG QI++++EV+ELP+ HPE F LGI
Sbjct: 142 IQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDP 201
Query: 245 PKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKK 304
PKGVL YGPPGTGKTLLARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 202 PKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKK 261
Query: 305 LAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTM 364
I+F DE+D+IG +R + G GGD+EVQRTM
Sbjct: 262 AC-----------------------------IVFFDEVDAIGGARFDDGVGGDNEVQRTM 292
Query: 365 LELLNQLDGFEA 376
LE++NQLDGF+A
Sbjct: 293 LEIVNQLDGFDA 304
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTLLARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 213 TGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSK 260
>gi|126340424|ref|XP_001364875.1| PREDICTED: 26S protease regulatory subunit 7-like [Monodelphis
domestica]
gi|395539130|ref|XP_003771526.1| PREDICTED: 26S protease regulatory subunit 7 [Sarcophilus harrisii]
gi|20532410|sp|P46471.5|PRS7_MOUSE RecName: Full=26S protease regulatory subunit 7; AltName: Full=26S
proteasome AAA-ATPase subunit RPT1; AltName:
Full=Proteasome 26S subunit ATPase 2; AltName:
Full=Protein MSS1
gi|12836770|dbj|BAB23807.1| unnamed protein product [Mus musculus]
gi|13529470|gb|AAH05462.1| Psmc2 protein [Mus musculus]
gi|74214370|dbj|BAE40423.1| unnamed protein product [Mus musculus]
gi|148671245|gb|EDL03192.1| proteasome (prosome, macropain) 26S subunit, ATPase 2, isoform
CRA_e [Mus musculus]
Length = 433
Score = 225 bits (573), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 116/230 (50%), Positives = 147/230 (63%), Gaps = 29/230 (12%)
Query: 146 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
K ++ V KFVVD+ + D+ RV + Y +H LP K+DP V++M VE+
Sbjct: 110 KYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEK 169
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
PD TY VGG QI++++EV+E P+ HPE F LGI PKGVLL+GPPGTGKTL ARAV
Sbjct: 170 PDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 229
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTI 325
A+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 230 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKK--------------------- 268
Query: 326 VCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C +IF DEID+IG +R + G+GGD+EVQRTMLEL+NQLDGF+
Sbjct: 269 AC--------LIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFD 310
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 220 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTK 267
>gi|345795599|ref|XP_003434055.1| PREDICTED: 26S protease regulatory subunit 10B-like [Canis lupus
familiaris]
Length = 418
Score = 225 bits (573), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 125/318 (39%), Positives = 183/318 (57%), Gaps = 47/318 (14%)
Query: 77 KSSEGFKPYYVTKIEELQLIVAEKE----QNLRRLQAQRNELNAKVRMLREELQLLQEQ- 131
+ S+G + + IE LI+A+ Q+ R+ + E++ +++ LRE+L+ L +Q
Sbjct: 10 RRSDGQETISIKNIERRLLIMADPRDKALQDYRKKLLEHKEIDGRLKELREQLKELTKQY 69
Query: 132 -------------GSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVAL 178
G VGEV+K + ++K +VK ++VV + +D + + P RVAL
Sbjct: 70 EKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVAL 129
Query: 179 RNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFD 238
+ T+ + LP +VDPLV M E + +Y +GGL QI+E++EVIELP+ +PELF
Sbjct: 130 DMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQ 189
Query: 239 ALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFV 298
+GI PKG LLYGPPGTGKTLLARAVA +C F++V S +V K+IGE +R++RE+F
Sbjct: 190 RVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFN 249
Query: 299 MASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDS 358
A R+H P IIFMDEID+IG R G+ D
Sbjct: 250 YA-----------------------------RDHQPCIIFMDEIDAIGGRRFSEGTSADR 280
Query: 359 EVQRTMLELLNQLDGFEA 376
E+QRT++ELLNQ+DGF+
Sbjct: 281 EIQRTLMELLNQMDGFDT 298
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 35/46 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA +C F++V S +V K+IGE +R++RE+F AR
Sbjct: 207 TGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYAR 252
>gi|258596995|ref|XP_001347366.2| 26S proteasome regulatory subunit 4, putative [Plasmodium
falciparum 3D7]
gi|254922393|gb|AAN35279.2| 26S proteasome regulatory subunit 4, putative [Plasmodium
falciparum 3D7]
Length = 448
Score = 225 bits (573), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 113/230 (49%), Positives = 158/230 (68%), Gaps = 31/230 (13%)
Query: 147 VLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVP 206
+ V PE + V+I +D + + P C V L N++ ++ IL ++VDPLVS+M VEK P
Sbjct: 131 IATSVGPE--YYVNILSFVDKDLLEPGCSVLLNNKTNSVVGILLDEVDPLVSVMKVEKAP 188
Query: 207 DSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVA 266
+Y +GGL++QI+EIKE +ELP+ HPEL++ +GI PKGV+LYGPPGTGKTLLA+AVA
Sbjct: 189 LESYADIGGLESQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGPPGTGKTLLAKAVA 248
Query: 267 HHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIV 326
+ T TF+RV GSEL+QK++G+G ++VRE+F +A
Sbjct: 249 NETSATFLRVVGSELIQKYLGDGPKLVREMFKVA-------------------------- 282
Query: 327 CNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
EHAPSI+F+DEID++G+ R E+ SGG+ E+QRTMLELLNQLDGF++
Sbjct: 283 ---EEHAPSIVFIDEIDAVGTKRYEATSGGEREIQRTMLELLNQLDGFDS 329
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRE+F +A
Sbjct: 238 TGKTLLAKAVANETSATFLRVVGSELIQKYLGDGPKLVREMFKVA 282
>gi|194209436|ref|XP_001914838.1| PREDICTED: 26S protease regulatory subunit 7 isoform 1 [Equus
caballus]
gi|338723876|ref|XP_003364820.1| PREDICTED: 26S protease regulatory subunit 7 isoform 2 [Equus
caballus]
Length = 433
Score = 225 bits (573), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 116/230 (50%), Positives = 147/230 (63%), Gaps = 29/230 (12%)
Query: 146 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
K ++ V KFVVD+ + D+ RV + Y +H LP K+DP V++M VE+
Sbjct: 110 KYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEK 169
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
PD TY VGG QI++++EV+E P+ HPE F LGI PKGVLL+GPPGTGKTL ARAV
Sbjct: 170 PDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 229
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTI 325
A+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 230 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKK--------------------- 268
Query: 326 VCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C +IF DEID+IG +R + G+GGD+EVQRTMLEL+NQLDGF+
Sbjct: 269 AC--------LIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFD 310
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 220 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTK 267
>gi|58377204|ref|XP_309476.2| AGAP011174-PA [Anopheles gambiae str. PEST]
gi|55244811|gb|EAA05145.2| AGAP011174-PA [Anopheles gambiae str. PEST]
Length = 434
Score = 225 bits (573), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 125/260 (48%), Positives = 160/260 (61%), Gaps = 34/260 (13%)
Query: 121 LREELQLLQ-EQGSYVGEVVKPM----DKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCR 175
L + Q+LQ EQ V K + D K ++ V KFVVD+ ++ D+ R
Sbjct: 81 LASDKQILQNEQPLQVARCTKIINADSDDPKYIINVKQFAKFVVDLADSVAPTDIEEGMR 140
Query: 176 VALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPE 235
V + Y +H LP K+DP V++M VE+ PD TY VGG QI++++EV+E P+ HPE
Sbjct: 141 VGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPE 200
Query: 236 LFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRE 295
F LGI PKGVLL+GPPGTGKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRE
Sbjct: 201 KFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRE 260
Query: 296 LFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSG 355
LF MA KK C +IF DEID+IG +R + G+G
Sbjct: 261 LFEMARSKK---------------------AC--------LIFFDEIDAIGGARFDDGAG 291
Query: 356 GDSEVQRTMLELLNQLDGFE 375
GD+EVQRTMLEL+NQLDGF+
Sbjct: 292 GDNEVQRTMLELINQLDGFD 311
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 221 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARSK 268
>gi|431839409|gb|ELK01335.1| 26S protease regulatory subunit 7 [Pteropus alecto]
Length = 433
Score = 225 bits (573), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 116/230 (50%), Positives = 147/230 (63%), Gaps = 29/230 (12%)
Query: 146 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
K ++ V KFVVD+ + D+ RV + Y +H LP K+DP V++M VE+
Sbjct: 110 KYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEK 169
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
PD TY VGG QI++++EV+E P+ HPE F LGI PKGVLL+GPPGTGKTL ARAV
Sbjct: 170 PDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 229
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTI 325
A+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 230 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKK--------------------- 268
Query: 326 VCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C +IF DEID+IG +R + G+GGD+EVQRTMLEL+NQLDGF+
Sbjct: 269 AC--------LIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFD 310
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 220 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTK 267
>gi|308503911|ref|XP_003114139.1| CRE-RPT-1 protein [Caenorhabditis remanei]
gi|308261524|gb|EFP05477.1| CRE-RPT-1 protein [Caenorhabditis remanei]
Length = 435
Score = 225 bits (573), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 115/230 (50%), Positives = 148/230 (64%), Gaps = 29/230 (12%)
Query: 146 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
+ L+ V KFVVD+ ++ D+ RV + Y +H LP K+DP V++M VE+
Sbjct: 112 RYLINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHLPLPAKIDPTVTMMQVEEK 171
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
PD TY VGG +QI++++EV+E P+ HPE + LGI PKGVLLYGPPGTGKTL ARAV
Sbjct: 172 PDVTYSDVGGCKDQIEKLREVVETPLLHPERYVNLGIEPPKGVLLYGPPGTGKTLCARAV 231
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTI 325
A+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 232 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKK--------------------- 270
Query: 326 VCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C +IF DEID++G +R + G GGD+EVQRTMLEL+NQLDGF+
Sbjct: 271 AC--------LIFFDEIDAVGGARFDDGQGGDNEVQRTMLELINQLDGFD 312
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 222 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTK 269
>gi|332158359|ref|YP_004423638.1| proteasome-activating nucleotidase [Pyrococcus sp. NA2]
gi|331033822|gb|AEC51634.1| proteasome-activating nucleotidase [Pyrococcus sp. NA2]
Length = 396
Score = 225 bits (573), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 121/294 (41%), Positives = 180/294 (61%), Gaps = 29/294 (9%)
Query: 82 FKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKP 141
F+ Y I L+ + + E +R L+A + L ++ LR E+ L++ ++ G V++
Sbjct: 8 FEGNYDDYITYLKRRIRQLELQVRMLEADKERLERELSRLRSEMARLRQPPAFAGTVIEV 67
Query: 142 MDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMM 201
+D + +V+ + +FVV I ID + P RVAL + + +ILP+ DP V
Sbjct: 68 LDDDRAIVQNYNGPRFVVRIAPWIDRKKLRPGTRVALDQRTMAVIEILPSSKDPAVLGFE 127
Query: 202 VEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLL 261
V + P+ TY +GGL Q++E++E IELP+KHPELF+ +GI PKGVLLYGPPG GKTL+
Sbjct: 128 VIERPNVTYNDIGGLKKQLQELREAIELPLKHPELFEEVGIDPPKGVLLYGPPGCGKTLM 187
Query: 262 ARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTIL 321
A+A+AH TFIRV GSELV+K+IGEG+R+V ELF +A
Sbjct: 188 AKALAHEVNATFIRVVGSELVRKYIGEGARLVHELFELA--------------------- 226
Query: 322 TNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
+E APSIIF+DEID+IG+ R++ +GG+ EV RT+++LL ++DGF+
Sbjct: 227 --------KEKAPSIIFIDEIDAIGAKRMDETTGGEREVNRTLMQLLAEMDGFD 272
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 40/50 (80%)
Query: 13 GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
GKTL+A+A+AH TFIRV GSELV+K+IGEG+R+V ELF +A+ K S
Sbjct: 183 GKTLMAKALAHEVNATFIRVVGSELVRKYIGEGARLVHELFELAKEKAPS 232
>gi|197098688|ref|NP_001126144.1| 26S protease regulatory subunit 7 [Pongo abelii]
gi|75070629|sp|Q5R8D7.3|PRS7_PONAB RecName: Full=26S protease regulatory subunit 7; AltName: Full=26S
proteasome AAA-ATPase subunit RPT1; AltName:
Full=Proteasome 26S subunit ATPase 2
gi|55730503|emb|CAH91973.1| hypothetical protein [Pongo abelii]
Length = 433
Score = 225 bits (573), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 116/230 (50%), Positives = 147/230 (63%), Gaps = 29/230 (12%)
Query: 146 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
K ++ V KFVVD+ + D+ RV + Y +H LP K+DP V++M VE+
Sbjct: 110 KYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEK 169
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
PD TY VGG QI++++EV+E P+ HPE F LGI PKGVLL+GPPGTGKTL ARAV
Sbjct: 170 PDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 229
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTI 325
A+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 230 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKK--------------------- 268
Query: 326 VCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C +IF DEID+IG +R + G+GGD+EVQRTMLEL+NQLDGF+
Sbjct: 269 AC--------LIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFD 310
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 220 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTK 267
>gi|290981028|ref|XP_002673233.1| predicted protein [Naegleria gruberi]
gi|284086815|gb|EFC40489.1| predicted protein [Naegleria gruberi]
Length = 445
Score = 225 bits (573), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 115/231 (49%), Positives = 148/231 (64%), Gaps = 29/231 (12%)
Query: 146 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
K L+ V K+VV + +N+ D+ R+ + Y + LP K+D V++M VE+
Sbjct: 119 KYLINVRQIAKYVVGLGENVAPTDIEEGMRIGVDRTKYQIRIPLPPKIDASVTMMTVEEK 178
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
PD TY +GG QI +I+EV+E P+ HPE F+ LGI PKGVLLYGPPGTGKTLLARAV
Sbjct: 179 PDITYNDIGGSKEQIDKIREVVETPLLHPEKFEGLGIDPPKGVLLYGPPGTGKTLLARAV 238
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTI 325
A+ T+ TFIRV GSELVQK++GEG+RMVRELF MA
Sbjct: 239 ANRTDATFIRVIGSELVQKYVGEGARMVRELFQMA------------------------- 273
Query: 326 VCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
R+ IIF DE+D+IG +R + G+GGD+EVQRTMLE++NQLDGFEA
Sbjct: 274 ----RQRKACIIFFDEVDAIGGTRFDDGAGGDNEVQRTMLEIVNQLDGFEA 320
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/46 (78%), Positives = 42/46 (91%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MAR
Sbjct: 229 TGKTLLARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFQMAR 274
>gi|355560891|gb|EHH17577.1| hypothetical protein EGK_14010 [Macaca mulatta]
gi|355747904|gb|EHH52401.1| hypothetical protein EGM_12835 [Macaca fascicularis]
Length = 433
Score = 225 bits (573), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 116/230 (50%), Positives = 147/230 (63%), Gaps = 29/230 (12%)
Query: 146 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
K ++ V KFVVD+ + D+ RV + Y +H LP K+DP V++M VE+
Sbjct: 110 KYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEK 169
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
PD TY VGG QI++++EV+E P+ HPE F LGI PKGVLL+GPPGTGKTL ARAV
Sbjct: 170 PDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 229
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTI 325
A+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 230 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKK--------------------- 268
Query: 326 VCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C +IF DEID+IG +R + G+GGD+EVQRTMLEL+NQLDGF+
Sbjct: 269 AC--------LIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFD 310
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 220 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTK 267
>gi|4506209|ref|NP_002794.1| 26S protease regulatory subunit 7 isoform 1 [Homo sapiens]
gi|62751409|ref|NP_001015639.1| 26S protease regulatory subunit 7 [Bos taurus]
gi|350529411|ref|NP_001231937.1| proteasome (prosome, macropain) 26S subunit, ATPase, 2 [Sus scrofa]
gi|114615262|ref|XP_519288.2| PREDICTED: 26S protease regulatory subunit 7 isoform 2 [Pan
troglodytes]
gi|301786591|ref|XP_002928709.1| PREDICTED: 26S protease regulatory subunit 7-like [Ailuropoda
melanoleuca]
gi|332238048|ref|XP_003268215.1| PREDICTED: 26S protease regulatory subunit 7 [Nomascus leucogenys]
gi|344270825|ref|XP_003407242.1| PREDICTED: 26S protease regulatory subunit 7-like [Loxodonta
africana]
gi|345782896|ref|XP_533103.3| PREDICTED: 26S protease regulatory subunit 7 [Canis lupus
familiaris]
gi|395818492|ref|XP_003782660.1| PREDICTED: 26S protease regulatory subunit 7 [Otolemur garnettii]
gi|402864446|ref|XP_003896476.1| PREDICTED: 26S protease regulatory subunit 7 [Papio anubis]
gi|410059494|ref|XP_003951151.1| PREDICTED: 26S protease regulatory subunit 7 [Pan troglodytes]
gi|410952120|ref|XP_003982735.1| PREDICTED: 26S protease regulatory subunit 7 [Felis catus]
gi|426227541|ref|XP_004007876.1| PREDICTED: 26S protease regulatory subunit 7 [Ovis aries]
gi|426357418|ref|XP_004046038.1| PREDICTED: 26S protease regulatory subunit 7 [Gorilla gorilla
gorilla]
gi|547930|sp|P35998.3|PRS7_HUMAN RecName: Full=26S protease regulatory subunit 7; AltName: Full=26S
proteasome AAA-ATPase subunit RPT1; AltName:
Full=Proteasome 26S subunit ATPase 2; AltName:
Full=Protein MSS1
gi|75070030|sp|Q5E9F9.3|PRS7_BOVIN RecName: Full=26S protease regulatory subunit 7; AltName: Full=26S
proteasome AAA-ATPase subunit RPT1; AltName:
Full=Proteasome 26S subunit ATPase 2
gi|75075782|sp|Q4R4R0.3|PRS7_MACFA RecName: Full=26S protease regulatory subunit 7; AltName: Full=26S
proteasome AAA-ATPase subunit RPT1; AltName:
Full=Proteasome 26S subunit ATPase 2
gi|219931|dbj|BAA01868.1| mammalian suppressor of sgv1 [Homo sapiens]
gi|12803525|gb|AAH02589.1| Proteasome (prosome, macropain) 26S subunit, ATPase, 2 [Homo
sapiens]
gi|51095169|gb|EAL24412.1| proteasome (prosome, macropain) 26S subunit, ATPase, 2 [Homo
sapiens]
gi|59858287|gb|AAX08978.1| proteasome 26S ATPase subunit 2 [Bos taurus]
gi|67971146|dbj|BAE01915.1| unnamed protein product [Macaca fascicularis]
gi|119603738|gb|EAW83332.1| proteasome (prosome, macropain) 26S subunit, ATPase, 2, isoform
CRA_b [Homo sapiens]
gi|149046588|gb|EDL99413.1| proteasome (prosome, macropain) 26S subunit, ATPase 2, isoform
CRA_d [Rattus norvegicus]
gi|158455000|gb|AAI02392.2| Proteasome (prosome, macropain) 26S subunit, ATPase, 2 [Bos taurus]
gi|261858398|dbj|BAI45721.1| proteasome (prosome, macropain) 26S subunit, ATPase, 2 [synthetic
construct]
gi|296488578|tpg|DAA30691.1| TPA: 26S protease regulatory subunit 7 [Bos taurus]
gi|351706042|gb|EHB08961.1| 26S protease regulatory subunit 7 [Heterocephalus glaber]
gi|380814866|gb|AFE79307.1| 26S protease regulatory subunit 7 isoform 1 [Macaca mulatta]
gi|383409593|gb|AFH28010.1| 26S protease regulatory subunit 7 isoform 1 [Macaca mulatta]
gi|384943162|gb|AFI35186.1| 26S protease regulatory subunit 7 isoform 1 [Macaca mulatta]
gi|410207620|gb|JAA01029.1| proteasome (prosome, macropain) 26S subunit, ATPase, 2 [Pan
troglodytes]
gi|410253844|gb|JAA14889.1| proteasome (prosome, macropain) 26S subunit, ATPase, 2 [Pan
troglodytes]
gi|410304868|gb|JAA31034.1| proteasome (prosome, macropain) 26S subunit, ATPase, 2 [Pan
troglodytes]
gi|410337209|gb|JAA37551.1| proteasome (prosome, macropain) 26S subunit, ATPase, 2 [Pan
troglodytes]
gi|440906482|gb|ELR56736.1| 26S protease regulatory subunit 7 [Bos grunniens mutus]
gi|444731740|gb|ELW72088.1| 26S protease regulatory subunit 7 [Tupaia chinensis]
gi|228886|prf||1813280A tat-mediated transactivation modulator
Length = 433
Score = 225 bits (573), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 116/230 (50%), Positives = 147/230 (63%), Gaps = 29/230 (12%)
Query: 146 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
K ++ V KFVVD+ + D+ RV + Y +H LP K+DP V++M VE+
Sbjct: 110 KYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEK 169
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
PD TY VGG QI++++EV+E P+ HPE F LGI PKGVLL+GPPGTGKTL ARAV
Sbjct: 170 PDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 229
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTI 325
A+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 230 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKK--------------------- 268
Query: 326 VCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C +IF DEID+IG +R + G+GGD+EVQRTMLEL+NQLDGF+
Sbjct: 269 AC--------LIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFD 310
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 220 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTK 267
>gi|17563248|ref|NP_506005.1| Protein RPT-1 [Caenorhabditis elegans]
gi|2492520|sp|Q18787.1|PRS7_CAEEL RecName: Full=26S protease regulatory subunit 7; AltName: Full=26S
proteasome AAA-ATPase subunit rpt-1; AltName:
Full=Proteasome 26S subunit ATPase 2
gi|3875191|emb|CAB01414.1| Protein RPT-1 [Caenorhabditis elegans]
Length = 435
Score = 225 bits (573), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 115/230 (50%), Positives = 148/230 (64%), Gaps = 29/230 (12%)
Query: 146 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
+ L+ V KFVVD+ ++ D+ RV + Y +H LP K+DP V++M VE+
Sbjct: 112 RYLINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHLPLPAKIDPTVTMMQVEEK 171
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
PD TY VGG +QI++++EV+E P+ HPE + LGI PKGVLLYGPPGTGKTL ARAV
Sbjct: 172 PDVTYSDVGGCKDQIEKLREVVETPLLHPERYVNLGIEPPKGVLLYGPPGTGKTLCARAV 231
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTI 325
A+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 232 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKK--------------------- 270
Query: 326 VCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C +IF DEID++G +R + G GGD+EVQRTMLEL+NQLDGF+
Sbjct: 271 AC--------LIFFDEIDAVGGARFDDGQGGDNEVQRTMLELINQLDGFD 312
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 222 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTK 269
>gi|355714044|gb|AES04872.1| proteasome 26S subunit, ATPase, 2 [Mustela putorius furo]
Length = 430
Score = 225 bits (573), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 116/230 (50%), Positives = 147/230 (63%), Gaps = 29/230 (12%)
Query: 146 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
K ++ V KFVVD+ + D+ RV + Y +H LP K+DP V++M VE+
Sbjct: 118 KYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEK 177
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
PD TY VGG QI++++EV+E P+ HPE F LGI PKGVLL+GPPGTGKTL ARAV
Sbjct: 178 PDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 237
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTI 325
A+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 238 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKK--------------------- 276
Query: 326 VCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C +IF DEID+IG +R + G+GGD+EVQRTMLEL+NQLDGF+
Sbjct: 277 AC--------LIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFD 318
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 228 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTK 275
>gi|281342914|gb|EFB18498.1| hypothetical protein PANDA_018742 [Ailuropoda melanoleuca]
Length = 397
Score = 225 bits (573), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 116/230 (50%), Positives = 147/230 (63%), Gaps = 29/230 (12%)
Query: 146 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
K ++ V KFVVD+ + D+ RV + Y +H LP K+DP V++M VE+
Sbjct: 74 KYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEK 133
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
PD TY VGG QI++++EV+E P+ HPE F LGI PKGVLL+GPPGTGKTL ARAV
Sbjct: 134 PDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 193
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTI 325
A+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 194 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKK--------------------- 232
Query: 326 VCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C +IF DEID+IG +R + G+GGD+EVQRTMLEL+NQLDGF+
Sbjct: 233 AC--------LIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFD 274
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 184 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTK 231
>gi|223478158|ref|YP_002582482.1| proteasome-activating AAA-ATPase [Thermococcus sp. AM4]
gi|214033384|gb|EEB74211.1| Proteasome-activating AAA-ATPase (PAN) archaeal [Thermococcus sp.
AM4]
Length = 397
Score = 225 bits (573), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 119/290 (41%), Positives = 180/290 (62%), Gaps = 29/290 (10%)
Query: 86 YVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKK 145
Y I L+ + + E +R L+A + L ++ LR E+ L++ ++ G V++ +D
Sbjct: 13 YDDYITFLKRRIRQLELQVRTLEADKERLERELSRLRTEMSRLRQPPAFAGNVIEVLDDD 72
Query: 146 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
+ +V+ + +FVV I I+ + + P RVAL + + ++LP + DP V V +
Sbjct: 73 RAIVQNYNGPRFVVRIAPWIERDKLKPGSRVALDQRTMAIVELLPTEKDPSVLGFEVIEK 132
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
P TY+ +GGLD Q+ E++E +ELP+KHPELF+ +GI PKGVLLYGPPG GKTL+A+AV
Sbjct: 133 PRVTYQDIGGLDRQLAELREAVELPLKHPELFEEVGIEPPKGVLLYGPPGCGKTLMAKAV 192
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTI 325
A+H TFIRV GSELV+KFIGEG+R+V ELF +A
Sbjct: 193 ANHVNATFIRVVGSELVRKFIGEGARLVHELFELA------------------------- 227
Query: 326 VCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
+E AP+IIF+DEID+IG+ R++ +GG+ EV RT+++LL ++DGF+
Sbjct: 228 ----KEKAPTIIFIDEIDAIGAKRMDETTGGEREVNRTLMQLLAEMDGFD 273
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/50 (64%), Positives = 41/50 (82%)
Query: 13 GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
GKTL+A+AVA+H TFIRV GSELV+KFIGEG+R+V ELF +A+ K +
Sbjct: 184 GKTLMAKAVANHVNATFIRVVGSELVRKFIGEGARLVHELFELAKEKAPT 233
>gi|51262008|gb|AAH80137.1| 26S protease regulatory subunit 7 [Xenopus (Silurana) tropicalis]
Length = 433
Score = 225 bits (573), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 116/230 (50%), Positives = 147/230 (63%), Gaps = 29/230 (12%)
Query: 146 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
K ++ V KFVVD+ + D+ RV + Y +H LP K+DP V++M VE+
Sbjct: 110 KYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEK 169
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
PD TY VGG QI++++EV+E P+ HPE F LGI PKGVLL+GPPGTGKTL ARAV
Sbjct: 170 PDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 229
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTI 325
A+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 230 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKK--------------------- 268
Query: 326 VCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C +IF DEID+IG +R + G+GGD+EVQRTMLEL+NQLDGF+
Sbjct: 269 AC--------LIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFD 310
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 220 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTK 267
>gi|256810123|ref|YP_003127492.1| proteasome-activating nucleotidase [Methanocaldococcus fervens
AG86]
gi|256793323|gb|ACV23992.1| 26S proteasome subunit P45 family [Methanocaldococcus fervens AG86]
Length = 430
Score = 225 bits (573), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 118/257 (45%), Positives = 166/257 (64%), Gaps = 29/257 (11%)
Query: 120 MLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALR 179
+LR EL ++ VG VV + ++KV+VK F+V+I ++ D+TP RV L
Sbjct: 79 ILRRELDRMRIPPLIVGTVVDRVGERKVVVKSSTGPSFLVNISHFVNPEDLTPGKRVCLN 138
Query: 180 NESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDA 239
++ T+ +LP D M V++ P+ YE +GGLD QI+EI+EV+ELP+KHPELF+
Sbjct: 139 QQTLTVVDVLPENKDYRAKAMEVDERPNVRYEDIGGLDKQIQEIREVVELPLKHPELFEK 198
Query: 240 LGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVM 299
+GI PKG+LLYGPPGTGKTLLA+AVA T TFIRV GSELV+KFIGEG+ +V+++F +
Sbjct: 199 IGIEPPKGILLYGPPGTGKTLLAKAVARETNATFIRVVGSELVKKFIGEGATLVKDIFKL 258
Query: 300 ASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSE 359
A +E APSIIF+DEID+I + R ++ +GGD E
Sbjct: 259 A-----------------------------KEKAPSIIFIDEIDAIAAKRTDALTGGDRE 289
Query: 360 VQRTMLELLNQLDGFEA 376
VQRT+++LL ++DGF+A
Sbjct: 290 VQRTLMQLLAEMDGFDA 306
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 41/51 (80%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
+GKTLLA+AVA T TFIRV GSELV+KFIGEG+ +V+++F +A+ K S
Sbjct: 215 TGKTLLAKAVARETNATFIRVVGSELVKKFIGEGATLVKDIFKLAKEKAPS 265
>gi|38181888|gb|AAH61542.1| Proteasome (prosome, macropain) 26S subunit, ATPase 2 [Rattus
norvegicus]
Length = 433
Score = 225 bits (573), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 116/230 (50%), Positives = 147/230 (63%), Gaps = 29/230 (12%)
Query: 146 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
K ++ V KFVVD+ + D+ RV + Y +H LP K+DP V++M VE+
Sbjct: 110 KYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEK 169
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
PD TY VGG QI++++EV+E P+ HPE F LGI PKGVLL+GPPGTGKTL ARAV
Sbjct: 170 PDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 229
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTI 325
A+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 230 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKK--------------------- 268
Query: 326 VCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C +IF DEID+IG +R + G+GGD+EVQRTMLEL+NQLDGF+
Sbjct: 269 AC--------LIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFD 310
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 220 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTK 267
>gi|344240909|gb|EGV97012.1| 26S protease regulatory subunit 7 [Cricetulus griseus]
Length = 410
Score = 225 bits (573), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 116/230 (50%), Positives = 147/230 (63%), Gaps = 29/230 (12%)
Query: 146 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
K ++ V KFVVD+ + D+ RV + Y +H LP K+DP V++M VE+
Sbjct: 87 KYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEK 146
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
PD TY VGG QI++++EV+E P+ HPE F LGI PKGVLL+GPPGTGKTL ARAV
Sbjct: 147 PDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 206
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTI 325
A+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 207 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKK--------------------- 245
Query: 326 VCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C +IF DEID+IG +R + G+GGD+EVQRTMLEL+NQLDGF+
Sbjct: 246 AC--------LIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFD 287
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 197 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTK 244
>gi|341878046|gb|EGT33981.1| hypothetical protein CAEBREN_28758 [Caenorhabditis brenneri]
gi|341904462|gb|EGT60295.1| CBN-RPT-1 protein [Caenorhabditis brenneri]
Length = 435
Score = 225 bits (573), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 115/230 (50%), Positives = 148/230 (64%), Gaps = 29/230 (12%)
Query: 146 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
+ L+ V KFVVD+ ++ D+ RV + Y +H LP K+DP V++M VE+
Sbjct: 112 RYLINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHLPLPAKIDPTVTMMQVEEK 171
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
PD TY VGG +QI++++EV+E P+ HPE + LGI PKGVLLYGPPGTGKTL ARAV
Sbjct: 172 PDVTYSDVGGCKDQIEKLREVVETPLLHPERYVNLGIEPPKGVLLYGPPGTGKTLCARAV 231
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTI 325
A+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 232 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKK--------------------- 270
Query: 326 VCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C +IF DEID++G +R + G GGD+EVQRTMLEL+NQLDGF+
Sbjct: 271 AC--------LIFFDEIDAVGGARFDDGQGGDNEVQRTMLELINQLDGFD 312
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 222 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTK 269
>gi|76879893|dbj|BAE45763.1| putative protein product of Nbla10058 [Homo sapiens]
Length = 433
Score = 225 bits (573), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 116/230 (50%), Positives = 147/230 (63%), Gaps = 29/230 (12%)
Query: 146 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
K ++ V KFVVD+ + D+ RV + Y +H LP K+DP V++M VE+
Sbjct: 110 KYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEK 169
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
PD TY VGG QI++++EV+E P+ HPE F LGI PKGVLL+GPPGTGKTL ARAV
Sbjct: 170 PDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 229
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTI 325
A+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 230 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKK--------------------- 268
Query: 326 VCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C +IF DEID+IG +R + G+GGD+EVQRTMLEL+NQLDGF+
Sbjct: 269 AC--------LIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFD 310
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 220 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTK 267
>gi|397510781|ref|XP_003846216.1| PREDICTED: LOW QUALITY PROTEIN: 26S protease regulatory subunit 7
[Pan paniscus]
Length = 433
Score = 225 bits (573), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 115/230 (50%), Positives = 146/230 (63%), Gaps = 29/230 (12%)
Query: 146 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
K ++ V KFVVD+ + D+ RV + Y +H LP K+DP V++M VE+
Sbjct: 110 KYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEK 169
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
PD TY VGG QI++++EV+E P+ HPE F LGI PKGVLL+GPPGTGKTL ARAV
Sbjct: 170 PDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 229
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTI 325
A+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 230 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKXC------------------- 270
Query: 326 VCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
+IF DEID+IG +R + G+GGD+EVQRTMLEL+NQLDGF+
Sbjct: 271 ----------LIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFD 310
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 220 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTK 267
>gi|41472112|gb|AAS07429.1| unknown [Homo sapiens]
gi|449278820|gb|EMC86559.1| 26S protease regulatory subunit 7, partial [Columba livia]
Length = 409
Score = 225 bits (573), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 116/230 (50%), Positives = 147/230 (63%), Gaps = 29/230 (12%)
Query: 146 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
K ++ V KFVVD+ + D+ RV + Y +H LP K+DP V++M VE+
Sbjct: 86 KYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEK 145
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
PD TY VGG QI++++EV+E P+ HPE F LGI PKGVLL+GPPGTGKTL ARAV
Sbjct: 146 PDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 205
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTI 325
A+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 206 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKK--------------------- 244
Query: 326 VCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C +IF DEID+IG +R + G+GGD+EVQRTMLEL+NQLDGF+
Sbjct: 245 AC--------LIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFD 286
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 196 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTK 243
>gi|410930350|ref|XP_003978561.1| PREDICTED: 26S protease regulatory subunit 7-like [Takifugu
rubripes]
Length = 433
Score = 225 bits (573), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 116/230 (50%), Positives = 147/230 (63%), Gaps = 29/230 (12%)
Query: 146 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
K ++ V KFVVD+ + D+ RV + Y +H LP K+DP V++M VE+
Sbjct: 110 KYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEK 169
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
PD TY VGG QI++++EV+E P+ HPE F LGI PKGVLL+GPPGTGKTL ARAV
Sbjct: 170 PDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 229
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTI 325
A+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 230 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKK--------------------- 268
Query: 326 VCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C +IF DEID+IG +R + G+GGD+EVQRTMLEL+NQLDGF+
Sbjct: 269 AC--------LIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFD 310
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 220 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTK 267
>gi|167773595|gb|ABZ92232.1| proteasome (prosome, macropain) 26S subunit, ATPase, 2 [synthetic
construct]
Length = 433
Score = 225 bits (573), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 116/230 (50%), Positives = 147/230 (63%), Gaps = 29/230 (12%)
Query: 146 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
K ++ V KFVVD+ + D+ RV + Y +H LP K+DP V++M VE+
Sbjct: 110 KYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEK 169
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
PD TY VGG QI++++EV+E P+ HPE F LGI PKGVLL+GPPGTGKTL ARAV
Sbjct: 170 PDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 229
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTI 325
A+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 230 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKK--------------------- 268
Query: 326 VCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C +IF DEID+IG +R + G+GGD+EVQRTMLEL+NQLDGF+
Sbjct: 269 AC--------LIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFD 310
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 220 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTK 267
>gi|41055738|ref|NP_957260.1| 26S protease regulatory subunit 7 [Danio rerio]
gi|31419198|gb|AAH53187.1| Proteasome (prosome, macropain) 26S subunit, ATPase 2 [Danio rerio]
gi|182890060|gb|AAI65223.1| Psmc2 protein [Danio rerio]
Length = 433
Score = 225 bits (573), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 116/230 (50%), Positives = 147/230 (63%), Gaps = 29/230 (12%)
Query: 146 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
K ++ V KFVVD+ + D+ RV + Y +H LP K+DP V++M VE+
Sbjct: 110 KYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEK 169
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
PD TY VGG QI++++EV+E P+ HPE F LGI PKGVLL+GPPGTGKTL ARAV
Sbjct: 170 PDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 229
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTI 325
A+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 230 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKK--------------------- 268
Query: 326 VCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C +IF DEID+IG +R + G+GGD+EVQRTMLEL+NQLDGF+
Sbjct: 269 AC--------LIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFD 310
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 220 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTK 267
>gi|157134067|ref|XP_001663131.1| 26S protease regulatory subunit [Aedes aegypti]
gi|108870627|gb|EAT34852.1| AAEL012943-PA [Aedes aegypti]
Length = 434
Score = 225 bits (573), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 125/260 (48%), Positives = 160/260 (61%), Gaps = 34/260 (13%)
Query: 121 LREELQLLQ-EQGSYVGEVVKPM----DKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCR 175
L + Q+LQ EQ V K + D K ++ V KFVVD+ ++ D+ R
Sbjct: 81 LAADKQILQNEQPLQVARCTKIINADSDDPKYIINVKQFAKFVVDLADSVAPTDIEEGMR 140
Query: 176 VALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPE 235
V + Y +H LP K+DP V++M VE+ PD TY VGG QI++++EV+E P+ HPE
Sbjct: 141 VGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPE 200
Query: 236 LFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRE 295
F LGI PKGVLL+GPPGTGKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRE
Sbjct: 201 KFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRE 260
Query: 296 LFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSG 355
LF MA KK C +IF DEID+IG +R + G+G
Sbjct: 261 LFEMARSKK---------------------AC--------LIFFDEIDAIGGARFDDGAG 291
Query: 356 GDSEVQRTMLELLNQLDGFE 375
GD+EVQRTMLEL+NQLDGF+
Sbjct: 292 GDNEVQRTMLELINQLDGFD 311
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 221 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARSK 268
>gi|444707425|gb|ELW48702.1| 26S protease regulatory subunit 4 [Tupaia chinensis]
Length = 426
Score = 225 bits (573), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 114/242 (47%), Positives = 157/242 (64%), Gaps = 29/242 (11%)
Query: 135 VGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVD 194
VG + + +D +V + V I +D + + P C V L ++ + + +L + D
Sbjct: 95 VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTD 154
Query: 195 PLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPP 254
PLV++M VEK P TY +GGLDNQI+EIKE +ELP+ HPE ++ +GI PKGV+LYGPP
Sbjct: 155 PLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPP 214
Query: 255 GTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLF 314
GTGKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 215 GTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA-------------- 260
Query: 315 WSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGF 374
EHAPSI+F+DEID+IG+ R +S SGG+ E+QRTMLELLNQLDGF
Sbjct: 261 ---------------EEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGF 305
Query: 375 EA 376
++
Sbjct: 306 DS 307
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 216 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 260
>gi|45359210|ref|NP_988767.1| proteasome-activating nucleotidase [Methanococcus maripaludis S2]
gi|340624961|ref|YP_004743414.1| proteasome-activating nucleotidase [Methanococcus maripaludis X1]
gi|59798294|sp|Q6LWR0.1|PAN_METMP RecName: Full=Proteasome-activating nucleotidase; Short=PAN;
AltName: Full=Proteasomal ATPase; AltName:
Full=Proteasome regulatory ATPase; AltName:
Full=Proteasome regulatory particle
gi|45048085|emb|CAF31203.1| proteasome-activating nucleotidase (PAN) [Methanococcus maripaludis
S2]
gi|339905229|gb|AEK20671.1| proteasome-activating nucleotidase [Methanococcus maripaludis X1]
Length = 407
Score = 225 bits (573), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 114/287 (39%), Positives = 185/287 (64%), Gaps = 36/287 (12%)
Query: 97 VAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGS-------YVGEVVKPMDKKKVLV 149
+AE E + RL+ + ++N + +++E ++L+ + +G ++ ++++K +V
Sbjct: 27 IAELESKVLRLELKNKDINRENVQIKKENEILKRELDKLRIPPLILGTILDKVNERKAVV 86
Query: 150 KVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDST 209
K F+V++ + +D D+ P RV L ++ + ++LP + D M +E+ PD +
Sbjct: 87 KSSTGPNFLVNLSQFVDPEDIVPGARVCLNQQTLAIVEVLPKEKDYRAMAMEIEEKPDIS 146
Query: 210 YEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 269
+E +GGL+NQI++IKEV+ELP+K+PELF+ +GI PKGVLLYGPPGTGKTLLA+AVA+ T
Sbjct: 147 FEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPKGVLLYGPPGTGKTLLAKAVAYET 206
Query: 270 ECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNF 329
+F+RV GSELV+KFIGEG+++VR++F +A
Sbjct: 207 NASFVRVVGSELVKKFIGEGAKLVRDVFKLA----------------------------- 237
Query: 330 REHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
+E +P IIF+DEID++ S R ES +GGD EVQRT+++LL ++DGF++
Sbjct: 238 KEKSPCIIFIDEIDAVASKRTESLTGGDREVQRTLMQLLAEMDGFDS 284
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTLLA+AVA+ T +F+RV GSELV+KFIGEG+++VR++F +A+ K
Sbjct: 193 TGKTLLAKAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEK 240
>gi|260831900|ref|XP_002610896.1| hypothetical protein BRAFLDRAFT_126283 [Branchiostoma floridae]
gi|229296265|gb|EEN66906.1| hypothetical protein BRAFLDRAFT_126283 [Branchiostoma floridae]
Length = 433
Score = 225 bits (573), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 116/233 (49%), Positives = 150/233 (64%), Gaps = 29/233 (12%)
Query: 143 DKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMV 202
D K ++ V KFVVD+ +++ D+ RV + Y +H LP K+DP V+++ V
Sbjct: 107 DDAKYIINVKQFAKFVVDLAESVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPAVTMLQV 166
Query: 203 EKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 262
E+ PD TY VGG QI++++EV+E P+ HPE F LGI PKGVLL+GPPGTGKTL A
Sbjct: 167 EEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCA 226
Query: 263 RAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILT 322
RAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 227 RAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKK------------------ 268
Query: 323 NTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C +IF DEID+IG +R + G+GGD+EVQRTMLEL+NQLDGF+
Sbjct: 269 ---AC--------LIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFD 310
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 220 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTK 267
>gi|184185457|gb|ACC68862.1| proteasome 26S ATPase subunit 1 (predicted) [Rhinolophus
ferrumequinum]
Length = 356
Score = 225 bits (573), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 114/242 (47%), Positives = 157/242 (64%), Gaps = 29/242 (11%)
Query: 135 VGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVD 194
VG + + +D +V + V I +D + + P C V L ++ + + +L + D
Sbjct: 25 VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTD 84
Query: 195 PLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPP 254
PLV++M VEK P TY +GGLDNQI+EIKE +ELP+ HPE ++ +GI PKGV+LYGPP
Sbjct: 85 PLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPP 144
Query: 255 GTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLF 314
GTGKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 145 GTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAE------------- 191
Query: 315 WSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGF 374
EHAPSI+F+DEID+IG+ R +S SGG+ E+QRTMLELLNQLDGF
Sbjct: 192 ----------------EHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGF 235
Query: 375 EA 376
++
Sbjct: 236 DS 237
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 146 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 190
>gi|346465895|gb|AEO32792.1| hypothetical protein [Amblyomma maculatum]
Length = 468
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 116/230 (50%), Positives = 149/230 (64%), Gaps = 29/230 (12%)
Query: 146 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
K ++ V KFVVD+ ++ D+ RV + Y +H LP K+DP V++M VE+
Sbjct: 145 KYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEK 204
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
PD TY VGG QI++++EV+E+P+ HPE F LGI PKGVLL+GPPGTGKTL ARAV
Sbjct: 205 PDVTYADVGGCKEQIEKLREVVEMPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 264
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTI 325
A+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 265 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARSKK--------------------- 303
Query: 326 VCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C +IF DEID+IG +R + G+GGD+EVQRTMLEL+NQLDGF+
Sbjct: 304 AC--------LIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFD 345
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 255 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARSK 302
>gi|405955604|gb|EKC22660.1| 26S protease regulatory subunit 7 [Crassostrea gigas]
Length = 417
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 117/233 (50%), Positives = 148/233 (63%), Gaps = 29/233 (12%)
Query: 143 DKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMV 202
D K ++ V KFVVD+ + D+ RV + Y +H LP K+DP V++M V
Sbjct: 91 DDPKYIINVKQFAKFVVDLGDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPSVTMMQV 150
Query: 203 EKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 262
E+ PD TY VGG QI++++EV+E P+ HPE F LGI PKGVLL+GPPGTGKTL A
Sbjct: 151 EEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCA 210
Query: 263 RAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILT 322
RAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 211 RAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARNKK------------------ 252
Query: 323 NTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C IIF DEID++G +R + G+GGD+EVQRTMLEL+NQLDGF+
Sbjct: 253 ---AC--------IIFFDEIDAVGGARFDDGAGGDNEVQRTMLELINQLDGFD 294
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 204 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARNK 251
>gi|387017882|gb|AFJ51059.1| 26S protease regulatory subunit 7 [Crotalus adamanteus]
Length = 435
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 116/230 (50%), Positives = 147/230 (63%), Gaps = 29/230 (12%)
Query: 146 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
K ++ V KFVVD+ + D+ RV + Y +H LP K+DP V++M VE+
Sbjct: 112 KYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEK 171
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
PD TY VGG QI++++EV+E P+ HPE F LGI PKGVLL+GPPGTGKTL ARAV
Sbjct: 172 PDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 231
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTI 325
A+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 232 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKK--------------------- 270
Query: 326 VCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C +IF DEID+IG +R + G+GGD+EVQRTMLEL+NQLDGF+
Sbjct: 271 AC--------LIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFD 312
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 222 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTK 269
>gi|391341081|ref|XP_003744860.1| PREDICTED: 26S protease regulatory subunit 7-like isoform 1
[Metaseiulus occidentalis]
Length = 439
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 116/230 (50%), Positives = 149/230 (64%), Gaps = 29/230 (12%)
Query: 146 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
K ++ V KFVVD+ +++ D+ RV + Y +H LP K+DP V++M VE+
Sbjct: 116 KYMINVKQFAKFVVDLAESVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEK 175
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
PD TY VGG QI++++EV+E P+ HPE F LGI PKGVLL+GPPGTGKTL ARAV
Sbjct: 176 PDVTYTDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 235
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTI 325
A+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 236 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKK--------------------- 274
Query: 326 VCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C +IF DEID+IG +R + G+GGD+EVQRTMLEL+NQLDGF+
Sbjct: 275 AC--------LIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFD 316
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 226 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTK 273
>gi|66357072|ref|XP_625714.1| 26S proteasome regulatory subunit S4 like AAA ATpase
[Cryptosporidium parvum Iowa II]
gi|67592589|ref|XP_665653.1| 26S proteasome AAA-ATPase subunit RPT2a [Cryptosporidium hominis
TU502]
gi|46226649|gb|EAK87628.1| 26S proteasome regulatory subunit S4 like AAA ATpase
[Cryptosporidium parvum Iowa II]
gi|54656441|gb|EAL35425.1| 26S proteasome AAA-ATPase subunit RPT2a [Cryptosporidium hominis]
Length = 445
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 113/242 (46%), Positives = 162/242 (66%), Gaps = 29/242 (11%)
Query: 135 VGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVD 194
+G + + +D+ +V ++ V+I +D N + P V L N+ Y++ I+ ++VD
Sbjct: 114 IGTLEEIIDENHAIVSSSVGSEYYVNILSFVDKNQLEPGSSVLLHNKVYSVVGIMNDEVD 173
Query: 195 PLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPP 254
PLVS+M V+K P +Y +GGL+ QI+EIKE +E+P+ HPEL+D +GI PKGV+LYGPP
Sbjct: 174 PLVSVMKVDKAPLESYADIGGLEQQIQEIKEAVEIPLTHPELYDDIGIKPPKGVILYGPP 233
Query: 255 GTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLF 314
GTGKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 234 GTGKTLLAKAVANETSATFLRVVGSELIQKYLGDGPKLVRELFRVAE------------- 280
Query: 315 WSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGF 374
E+APSI+F+DEID++G+ R +S SGG+ ++QRTMLELLNQLDGF
Sbjct: 281 ----------------ENAPSIVFIDEIDAVGTKRHDSQSGGERDIQRTMLELLNQLDGF 324
Query: 375 EA 376
EA
Sbjct: 325 EA 326
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 235 TGKTLLAKAVANETSATFLRVVGSELIQKYLGDGPKLVRELFRVA 279
>gi|50344836|ref|NP_001002091.1| proteasome (prosome, macropain) 26S subunit, ATPase, 1b [Danio
rerio]
gi|48734936|gb|AAH71538.1| Proteasome (prosome, macropain) 26S subunit, ATPase, 1b [Danio
rerio]
Length = 440
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 121/276 (43%), Positives = 168/276 (60%), Gaps = 29/276 (10%)
Query: 101 EQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVD 160
E+ R Q Q L K R ++ L+ VG + + +D +V + V
Sbjct: 75 EEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVS 134
Query: 161 IDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQI 220
I +D + + P C V L ++ + + +L + DPLV++M VEK P TY +GGLDNQI
Sbjct: 135 ILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQI 194
Query: 221 KEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSE 280
+EIKE +ELP+ HPE ++ +GI PKGV+LYG PGTGKTLLA+AVA+ T TF+RV GSE
Sbjct: 195 QEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSE 254
Query: 281 LVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMD 340
L+QK++G+G ++VRELF +A EHAPSI+F+D
Sbjct: 255 LIQKYLGDGPKLVRELFRVAE-----------------------------EHAPSIVFID 285
Query: 341 EIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
EID+IG+ R +S SGG+ E+QRTMLELLNQLDGF++
Sbjct: 286 EIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDS 321
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 230 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 274
>gi|134046787|ref|YP_001098272.1| proteasome-activating nucleotidase [Methanococcus maripaludis C5]
gi|166199291|sp|A4G0S4.1|PAN_METM5 RecName: Full=Proteasome-activating nucleotidase; Short=PAN;
AltName: Full=Proteasomal ATPase; AltName:
Full=Proteasome regulatory ATPase; AltName:
Full=Proteasome regulatory particle
gi|132664412|gb|ABO36058.1| Proteasome-activating nucleotidase [Methanococcus maripaludis C5]
Length = 407
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 116/289 (40%), Positives = 185/289 (64%), Gaps = 29/289 (10%)
Query: 88 TKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKV 147
T+I EL+ V E + + + ++ + +L+ EL L+ +G ++ ++++K
Sbjct: 25 TQIAELESKVLRLELKNKDISRENVQIKKENEILKRELDKLRIPPLILGTILDRVNERKA 84
Query: 148 LVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPD 207
+VK F+V++ + +D +D+ P RV L ++ + ++LP + D M +E+ PD
Sbjct: 85 VVKSSTGPNFLVNLSQFVDPDDIVPGARVCLNQQTLAIVEVLPKEKDYRAMAMEIEEKPD 144
Query: 208 STYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAH 267
++E +GGL+NQI++IKEV+ELP+K+PELF+ +GI PKGVLLYGPPGTGKTLLA+AVA+
Sbjct: 145 ISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPKGVLLYGPPGTGKTLLAKAVAY 204
Query: 268 HTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVC 327
T +F+RV GSELV+KFIGEG+++VR++F +A
Sbjct: 205 ETNASFVRVVGSELVKKFIGEGAKLVRDVFKLA--------------------------- 237
Query: 328 NFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
+E +P IIF+DEID++ S R ES +GGD EVQRT+++LL ++DGF++
Sbjct: 238 --KEKSPCIIFIDEIDAVASKRTESLTGGDREVQRTLMQLLAEMDGFDS 284
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTLLA+AVA+ T +F+RV GSELV+KFIGEG+++VR++F +A+ K
Sbjct: 193 TGKTLLAKAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEK 240
>gi|57525333|ref|NP_001006225.1| 26S protease regulatory subunit 7 [Gallus gallus]
gi|350537583|ref|NP_001232055.1| putative 26S protease regulatory subunit 7 [Taeniopygia guttata]
gi|327273622|ref|XP_003221579.1| PREDICTED: 26S protease regulatory subunit 7-like [Anolis
carolinensis]
gi|53127484|emb|CAG31125.1| hypothetical protein RCJMB04_2j13 [Gallus gallus]
gi|197129090|gb|ACH45588.1| putative 26S protease regulatory subunit 7 [Taeniopygia guttata]
Length = 433
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 116/230 (50%), Positives = 147/230 (63%), Gaps = 29/230 (12%)
Query: 146 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
K ++ V KFVVD+ + D+ RV + Y +H LP K+DP V++M VE+
Sbjct: 110 KYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEK 169
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
PD TY VGG QI++++EV+E P+ HPE F LGI PKGVLL+GPPGTGKTL ARAV
Sbjct: 170 PDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 229
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTI 325
A+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 230 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKK--------------------- 268
Query: 326 VCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C +IF DEID+IG +R + G+GGD+EVQRTMLEL+NQLDGF+
Sbjct: 269 AC--------LIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFD 310
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 220 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTK 267
>gi|387017828|gb|AFJ51032.1| 26S protease regulatory subunit 7 [Crotalus adamanteus]
Length = 433
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 116/230 (50%), Positives = 147/230 (63%), Gaps = 29/230 (12%)
Query: 146 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
K ++ V KFVVD+ + D+ RV + Y +H LP K+DP V++M VE+
Sbjct: 110 KYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEK 169
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
PD TY VGG QI++++EV+E P+ HPE F LGI PKGVLL+GPPGTGKTL ARAV
Sbjct: 170 PDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 229
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTI 325
A+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 230 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKK--------------------- 268
Query: 326 VCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C +IF DEID+IG +R + G+GGD+EVQRTMLEL+NQLDGF+
Sbjct: 269 AC--------LIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFD 310
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 220 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTK 267
>gi|27735425|gb|AAH41186.1| Psmc2 protein [Xenopus laevis]
Length = 444
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 116/230 (50%), Positives = 147/230 (63%), Gaps = 29/230 (12%)
Query: 146 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
K ++ V KFVVD+ + D+ RV + Y +H LP K+DP V++M VE+
Sbjct: 121 KYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEK 180
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
PD TY VGG QI++++EV+E P+ HPE F LGI PKGVLL+GPPGTGKTL ARAV
Sbjct: 181 PDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 240
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTI 325
A+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 241 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKK--------------------- 279
Query: 326 VCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C +IF DEID+IG +R + G+GGD+EVQRTMLEL+NQLDGF+
Sbjct: 280 AC--------LIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFD 321
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 231 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTK 278
>gi|45361037|ref|NP_989155.1| proteasome (prosome, macropain) 26S subunit, ATPase, 2 [Xenopus
(Silurana) tropicalis]
gi|147901369|ref|NP_001084136.1| 26S protease regulatory subunit 7 [Xenopus laevis]
gi|1172640|sp|P46472.1|PRS7_XENLA RecName: Full=26S protease regulatory subunit 7; AltName: Full=26S
proteasome AAA-ATPase subunit RPT1; AltName:
Full=Proteasome 26S subunit ATPase 2; AltName:
Full=Protein MSS1; Short=xMSS1
gi|695772|emb|CAA56438.1| xMSS1 [Xenopus laevis]
gi|32450021|gb|AAH54143.1| XMSS1 protein [Xenopus laevis]
gi|38494277|gb|AAH61627.1| 26S protease regulatory subunit 7 [Xenopus (Silurana) tropicalis]
gi|89267871|emb|CAJ83029.1| proteasome (prosome, macropain) 26S subunit, ATPase 2 [Xenopus
(Silurana) tropicalis]
gi|163916327|gb|AAI57415.1| XMSS1 protein [Xenopus laevis]
gi|1095500|prf||2109230A MSS1-like protein
Length = 433
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 116/230 (50%), Positives = 147/230 (63%), Gaps = 29/230 (12%)
Query: 146 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
K ++ V KFVVD+ + D+ RV + Y +H LP K+DP V++M VE+
Sbjct: 110 KYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEK 169
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
PD TY VGG QI++++EV+E P+ HPE F LGI PKGVLL+GPPGTGKTL ARAV
Sbjct: 170 PDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 229
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTI 325
A+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 230 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKK--------------------- 268
Query: 326 VCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C +IF DEID+IG +R + G+GGD+EVQRTMLEL+NQLDGF+
Sbjct: 269 AC--------LIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFD 310
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 220 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTK 267
>gi|225714250|gb|ACO12971.1| 26S protease regulatory subunit 7 [Lepeophtheirus salmonis]
Length = 435
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 116/233 (49%), Positives = 150/233 (64%), Gaps = 29/233 (12%)
Query: 143 DKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMV 202
D + ++ V KFVVD+ +++ D+ RV + Y +H LP K+DP V++M V
Sbjct: 109 DNPQYIINVKQFAKFVVDLAESVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQV 168
Query: 203 EKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 262
E+ PD TY VGG QI++++EV+E P+ HPE F LGI PKGVLLYGPPGTGKTL A
Sbjct: 169 EEKPDVTYGDVGGCKEQIEKLREVVETPLIHPERFVNLGIEPPKGVLLYGPPGTGKTLCA 228
Query: 263 RAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILT 322
RAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 229 RAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKK------------------ 270
Query: 323 NTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C +IF DEID++G +R + G+GGD+EVQRTMLEL+NQLDGF+
Sbjct: 271 ---AC--------LIFFDEIDAVGGARYDDGAGGDNEVQRTMLELINQLDGFD 312
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 222 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTK 269
>gi|148671241|gb|EDL03188.1| proteasome (prosome, macropain) 26S subunit, ATPase 2, isoform
CRA_a [Mus musculus]
Length = 394
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 116/230 (50%), Positives = 147/230 (63%), Gaps = 29/230 (12%)
Query: 146 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
K ++ V KFVVD+ + D+ RV + Y +H LP K+DP V++M VE+
Sbjct: 71 KYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEK 130
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
PD TY VGG QI++++EV+E P+ HPE F LGI PKGVLL+GPPGTGKTL ARAV
Sbjct: 131 PDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 190
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTI 325
A+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 191 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKK--------------------- 229
Query: 326 VCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C +IF DEID+IG +R + G+GGD+EVQRTMLEL+NQLDGF+
Sbjct: 230 AC--------LIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFD 271
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 181 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTK 228
>gi|57529874|ref|NP_001006494.1| 26S protease regulatory subunit S10B [Gallus gallus]
gi|53130584|emb|CAG31621.1| hypothetical protein RCJMB04_8n6 [Gallus gallus]
Length = 389
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 119/278 (42%), Positives = 165/278 (59%), Gaps = 29/278 (10%)
Query: 99 EKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFV 158
E + L+ L+ Q EL + +L+ LQ G VGEV+K + ++K +VK ++V
Sbjct: 21 EIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYV 80
Query: 159 VDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDN 218
V + +D + + P RVAL + T+ + LP +VDPLV M E D +Y +GGL
Sbjct: 81 VGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDVSYSEIGGLSE 140
Query: 219 QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSG 278
QI+E++EVIELP+ +PELF +GI PKG LLYGPPGTGKTLLARAVA +C F++V
Sbjct: 141 QIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVS 200
Query: 279 SELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIF 338
S +V K+IGE +R++RE+F A R+H P IIF
Sbjct: 201 SSIVDKYIGESARLIREMFNYA-----------------------------RDHQPCIIF 231
Query: 339 MDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
MDEID+IG R G+ D E+QRT++ELLNQ+DGF+
Sbjct: 232 MDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDT 269
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 35/46 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA +C F++V S +V K+IGE +R++RE+F AR
Sbjct: 178 TGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYAR 223
>gi|392879060|gb|AFM88362.1| 26S protease regulatory subunit 7 isoform 1 [Callorhinchus milii]
Length = 435
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 116/230 (50%), Positives = 147/230 (63%), Gaps = 29/230 (12%)
Query: 146 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
K ++ V KFVVD+ + D+ RV + Y +H LP K+DP V++M VE+
Sbjct: 112 KYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEK 171
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
PD TY VGG QI++++EV+E P+ HPE F LGI PKGVLL+GPPGTGKTL ARAV
Sbjct: 172 PDVTYSDVGGCKEQIEKLREVVETPLLHPESFVNLGIEPPKGVLLFGPPGTGKTLCARAV 231
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTI 325
A+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 232 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKK--------------------- 270
Query: 326 VCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C +IF DEID+IG +R + G+GGD+EVQRTMLEL+NQLDGF+
Sbjct: 271 AC--------LIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFD 312
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 222 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTK 269
>gi|213510772|ref|NP_001133113.1| 26S protease regulatory subunit 7 [Salmo salar]
gi|197631973|gb|ACH70710.1| 26S protease regulatory subunit 7 [Salmo salar]
gi|209732288|gb|ACI67013.1| 26S protease regulatory subunit 7 [Salmo salar]
Length = 434
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 116/230 (50%), Positives = 147/230 (63%), Gaps = 29/230 (12%)
Query: 146 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
K ++ V KFVVD+ + D+ RV + Y +H LP K+DP V++M VE+
Sbjct: 111 KYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEK 170
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
PD TY VGG QI++++EV+E P+ HPE F LGI PKGVLL+GPPGTGKTL ARAV
Sbjct: 171 PDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 230
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTI 325
A+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 231 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKK--------------------- 269
Query: 326 VCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C +IF DEID+IG +R + G+GGD+EVQRTMLEL+NQLDGF+
Sbjct: 270 AC--------LIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFD 311
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 221 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTK 268
>gi|345327832|ref|XP_001507929.2| PREDICTED: 26S protease regulatory subunit 7-like [Ornithorhynchus
anatinus]
Length = 425
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 116/230 (50%), Positives = 147/230 (63%), Gaps = 29/230 (12%)
Query: 146 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
K ++ V KFVVD+ + D+ RV + Y +H LP K+DP V++M VE+
Sbjct: 102 KYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEK 161
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
PD TY VGG QI++++EV+E P+ HPE F LGI PKGVLL+GPPGTGKTL ARAV
Sbjct: 162 PDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 221
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTI 325
A+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 222 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKK--------------------- 260
Query: 326 VCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C +IF DEID+IG +R + G+GGD+EVQRTMLEL+NQLDGF+
Sbjct: 261 AC--------LIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFD 302
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 212 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTK 259
>gi|443730648|gb|ELU16072.1| hypothetical protein CAPTEDRAFT_155993 [Capitella teleta]
Length = 433
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 116/233 (49%), Positives = 148/233 (63%), Gaps = 29/233 (12%)
Query: 143 DKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMV 202
D K ++ V KFVV++ + D+ RV + Y +H LP K+DP V++M V
Sbjct: 107 DDPKYIINVKQFAKFVVELSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQV 166
Query: 203 EKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 262
E+ PD TY VGG QI++++EV+E P+ HPE F LGI PKGVLL+GPPGTGKTL A
Sbjct: 167 EEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCA 226
Query: 263 RAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILT 322
RAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 227 RAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKK------------------ 268
Query: 323 NTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C I+F DEID+IG +R + G+GGD+EVQRTMLEL+NQLDGF+
Sbjct: 269 ---AC--------IVFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFD 310
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 220 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTK 267
>gi|268557298|ref|XP_002636638.1| C. briggsae CBR-RPT-1 protein [Caenorhabditis briggsae]
Length = 435
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 115/230 (50%), Positives = 148/230 (64%), Gaps = 29/230 (12%)
Query: 146 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
+ L+ V KFVVD+ ++ D+ RV + Y +H LP K+DP V++M VE+
Sbjct: 112 RYLINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHLPLPAKIDPTVTMMQVEEK 171
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
PD TY VGG +QI++++EV+E P+ HPE + LGI PKGVLLYGPPGTGKTL ARAV
Sbjct: 172 PDVTYSDVGGCKDQIEKLREVVETPLLHPERYVNLGIEPPKGVLLYGPPGTGKTLCARAV 231
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTI 325
A+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 232 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKK--------------------- 270
Query: 326 VCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C +IF DEID++G +R + G GGD+EVQRTMLEL+NQLDGF+
Sbjct: 271 AC--------LIFFDEIDAVGGARFDDGQGGDNEVQRTMLELINQLDGFD 312
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 222 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTK 269
>gi|148906531|gb|ABR16418.1| unknown [Picea sitchensis]
Length = 425
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 133/312 (42%), Positives = 181/312 (58%), Gaps = 37/312 (11%)
Query: 73 DEAIKSSEGFKPY--YVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRM-LREELQLLQ 129
D A+ + G PY + K E+ +A+K +L ++ L A + L + Q++Q
Sbjct: 21 DIALLKTYGLGPYSTAIKKAEKEIKEMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQ 80
Query: 130 E----QGSYVGEVVKP-MDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYT 184
E Q + +++ P D K ++ V KFVV + + D+ RV + Y
Sbjct: 81 EEQPLQVARCTKIINPNTDDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQ 140
Query: 185 LHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQ 244
+ LP K+DP V++M VE+ PD TY VGG QI++++EV+ELP+ HPE F LGI
Sbjct: 141 IQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDP 200
Query: 245 PKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKK 304
PKGVL YGPPGTGKTLLARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 201 PKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKK 260
Query: 305 LAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTM 364
I+F DE+D+IG +R + G GGD+EVQRTM
Sbjct: 261 AC-----------------------------IVFFDEVDAIGGARFDDGLGGDNEVQRTM 291
Query: 365 LELLNQLDGFEA 376
LE++NQLDGF+A
Sbjct: 292 LEIVNQLDGFDA 303
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTLLARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 212 TGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSK 259
>gi|291391275|ref|XP_002712149.1| PREDICTED: proteasome 26S ATPase subunit 2 [Oryctolagus cuniculus]
Length = 521
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 116/230 (50%), Positives = 147/230 (63%), Gaps = 29/230 (12%)
Query: 146 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
K ++ V KFVVD+ + D+ RV + Y +H LP K+DP V++M VE+
Sbjct: 198 KYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEK 257
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
PD TY VGG QI++++EV+E P+ HPE F LGI PKGVLL+GPPGTGKTL ARAV
Sbjct: 258 PDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 317
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTI 325
A+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 318 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKK--------------------- 356
Query: 326 VCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C +IF DEID+IG +R + G+GGD+EVQRTMLEL+NQLDGF+
Sbjct: 357 AC--------LIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFD 398
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 308 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTK 355
>gi|156550335|ref|XP_001603253.1| PREDICTED: 26S protease regulatory subunit 7-like [Nasonia
vitripennis]
Length = 434
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 117/233 (50%), Positives = 149/233 (63%), Gaps = 29/233 (12%)
Query: 143 DKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMV 202
D K ++ V KFVVD+ ++ D+ RV + Y +H LP K+DP V++M V
Sbjct: 108 DDPKYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQV 167
Query: 203 EKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 262
E+ PD TY VGG QI++++EV+E P+ HPE F LGI PKGVLL+GPPGTGKTL A
Sbjct: 168 EEKPDVTYSDVGGCKEQIEKLREVVETPLLHPEKFVNLGIEPPKGVLLFGPPGTGKTLCA 227
Query: 263 RAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILT 322
RAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 228 RAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARSKK------------------ 269
Query: 323 NTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C +IF DEID+IG +R + G+GGD+EVQRTMLEL+NQLDGF+
Sbjct: 270 ---AC--------LIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFD 311
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 221 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARSK 268
>gi|403377096|gb|EJY88541.1| 26S protease regulatory subunit 4 [Oxytricha trifallax]
Length = 451
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 124/277 (44%), Positives = 178/277 (64%), Gaps = 37/277 (13%)
Query: 102 QNLRRLQAQRNELNAKVRMLREELQLLQEQGS--YVGEVVKPMDKKKVLVKVHPEGKFVV 159
+N RL+ Q E N + +E L++ + +G+ VG + + +D + +V H ++ V
Sbjct: 91 KNQERLKPQ--EENKE----KERLKVDELRGTPLTVGTLEEIIDDEHAIVTPHVGLEYYV 144
Query: 160 DIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQ 219
I +D + + P C V L + S+ + IL + +DP+VS+M VEK P +Y +GGL+ Q
Sbjct: 145 PILSIVDKDQLEPGCSVLLNHRSHAIVGILQDDIDPMVSVMKVEKAPLESYADIGGLEAQ 204
Query: 220 IKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGS 279
I+EIKE +ELP+ +PEL++ LGI PKGV+LYG PGTGKTLLA+AVA+ T TF+RV GS
Sbjct: 205 IREIKEAVELPLTNPELYEDLGIKPPKGVILYGEPGTGKTLLAKAVANQTSATFLRVVGS 264
Query: 280 ELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFM 339
EL++K++GEG ++VRE+F +A EHAPSIIFM
Sbjct: 265 ELIKKYLGEGPKLVREIFRIAE-----------------------------EHAPSIIFM 295
Query: 340 DEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
DEID+IG+ R ++ SGG+ EVQRTMLELLNQLDGF++
Sbjct: 296 DEIDAIGTKRYDTSSGGEKEVQRTMLELLNQLDGFDS 332
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL++K++GEG ++VRE+F +A
Sbjct: 241 TGKTLLAKAVANQTSATFLRVVGSELIKKYLGEGPKLVREIFRIA 285
>gi|170055071|ref|XP_001863417.1| 26S protease regulatory subunit 7 [Culex quinquefasciatus]
gi|167875161|gb|EDS38544.1| 26S protease regulatory subunit 7 [Culex quinquefasciatus]
Length = 433
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 125/260 (48%), Positives = 160/260 (61%), Gaps = 34/260 (13%)
Query: 121 LREELQLLQ-EQGSYVGEVVKPM----DKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCR 175
L + Q+LQ EQ V K + D K ++ V KFVVD+ ++ D+ R
Sbjct: 80 LAADKQILQNEQPLQVARCTKIINADSDDPKYIINVKQFAKFVVDLADSVAPTDIEEGMR 139
Query: 176 VALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPE 235
V + Y +H LP K+DP V++M VE+ PD TY VGG QI++++EV+E P+ HPE
Sbjct: 140 VGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPE 199
Query: 236 LFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRE 295
F LGI PKGVLL+GPPGTGKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRE
Sbjct: 200 KFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRE 259
Query: 296 LFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSG 355
LF MA KK C +IF DEID+IG +R + G+G
Sbjct: 260 LFEMARSKK---------------------AC--------LIFFDEIDAIGGARFDDGAG 290
Query: 356 GDSEVQRTMLELLNQLDGFE 375
GD+EVQRTMLEL+NQLDGF+
Sbjct: 291 GDNEVQRTMLELINQLDGFD 310
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 220 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARSK 267
>gi|195442210|ref|XP_002068851.1| GK17804 [Drosophila willistoni]
gi|194164936|gb|EDW79837.1| GK17804 [Drosophila willistoni]
Length = 698
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 125/260 (48%), Positives = 159/260 (61%), Gaps = 34/260 (13%)
Query: 121 LREELQLLQ-EQGSYVGEVVKPM----DKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCR 175
L + Q+LQ EQ V K + D K ++ V KFVVD+ ++ D+ R
Sbjct: 270 LAADKQILQNEQPLQVARCTKIINADSDDPKYIINVKQFAKFVVDLADSVAPTDIEEGMR 329
Query: 176 VALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPE 235
V + Y +H LP K+DP V++M VE PD TY VGG QI++++EV+E P+ HPE
Sbjct: 330 VGVDRNKYQIHIPLPPKIDPTVTMMQVEDKPDVTYSDVGGCKEQIEKLREVVETPLLHPE 389
Query: 236 LFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRE 295
F LGI PKGVLL+GPPGTGKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRE
Sbjct: 390 KFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRE 449
Query: 296 LFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSG 355
LF MA KK C +IF DEID+IG +R + G+G
Sbjct: 450 LFEMARSKK---------------------AC--------LIFFDEIDAIGGARFDDGAG 480
Query: 356 GDSEVQRTMLELLNQLDGFE 375
GD+EVQRTMLEL+NQLDGF+
Sbjct: 481 GDNEVQRTMLELINQLDGFD 500
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 410 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARSK 457
>gi|374630437|ref|ZP_09702822.1| Proteasome-activating nucleotidase [Methanoplanus limicola DSM
2279]
gi|373908550|gb|EHQ36654.1| Proteasome-activating nucleotidase [Methanoplanus limicola DSM
2279]
Length = 412
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 124/286 (43%), Positives = 170/286 (59%), Gaps = 33/286 (11%)
Query: 91 EELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVK 150
EEL+ + +EK R ++ Q+ ++R L+ E++ L+ +G + + +V+
Sbjct: 37 EELRQLESEK----RFIETQKIRFEREIRKLKGEVEKLRSPPLIIGTITDIAGDSRYVVQ 92
Query: 151 VHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTY 210
KF+V +D D+ R L +S T+ ILP D + M + +P+ TY
Sbjct: 93 SSAGPKFMVRASGFLDTADLKQGARCTLNQQSLTIVDILPVSFDSQIYGMEISNIPEETY 152
Query: 211 EMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTE 270
+ VGGL+ QI EI+E +ELP+ PE+F +GI PKGVLLYGPPGTGKTLLARAVAHHTE
Sbjct: 153 DDVGGLEYQITEIREAVELPLTKPEIFTRIGITPPKGVLLYGPPGTGKTLLARAVAHHTE 212
Query: 271 CTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFR 330
F+RV GSELVQK+IGEG+R+VRELF +A R
Sbjct: 213 AKFLRVVGSELVQKYIGEGARLVRELFELA-----------------------------R 243
Query: 331 EHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
+ APSIIF+DEID+IG+ R E + GD EVQRT+++LL LDGFEA
Sbjct: 244 KSAPSIIFIDEIDAIGAHRTEGITSGDREVQRTLMQLLADLDGFEA 289
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/51 (72%), Positives = 43/51 (84%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
+GKTLLARAVAHHTE F+RV GSELVQK+IGEG+R+VRELF +AR S
Sbjct: 198 TGKTLLARAVAHHTEAKFLRVVGSELVQKYIGEGARLVRELFELARKSAPS 248
>gi|158291405|ref|XP_312923.4| AGAP003215-PA [Anopheles gambiae str. PEST]
gi|158291407|ref|XP_312924.4| AGAP003216-PA [Anopheles gambiae str. PEST]
gi|157017759|gb|EAA08386.4| AGAP003215-PA [Anopheles gambiae str. PEST]
gi|157017760|gb|EAA08387.4| AGAP003216-PA [Anopheles gambiae str. PEST]
Length = 438
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 120/288 (41%), Positives = 176/288 (61%), Gaps = 33/288 (11%)
Query: 89 KIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVL 148
+I++ L+ E +N RL+ Q K+ R ++ L+ VG + + +D +
Sbjct: 65 RIKDYLLMEEEFIRNQERLKPQEE----KIEEERSKVDDLRGSPMSVGTLEEIIDDNHAI 120
Query: 149 VKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDS 208
V + V I +D + + P C V L ++ + + +L + DP+V++M +EK P
Sbjct: 121 VSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLGDDTDPMVTVMKLEKAPQE 180
Query: 209 TYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH 268
TY +GGLD QI+EIKE +ELP+ HPE ++ +GI PKGV+LYGPPGTGKTLLA+AVA+
Sbjct: 181 TYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQ 240
Query: 269 TECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCN 328
T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 241 TSATFLRVVGSELIQKYLGDGPKLVRELFRVAE--------------------------- 273
Query: 329 FREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
EHAPSI+F+DEID++G+ R +S SGG+ E+QRTMLELLNQLDGF++
Sbjct: 274 --EHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDS 319
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 228 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 272
>gi|289740279|gb|ADD18887.1| 26S proteasome regulatory complex ATPase RPT1 [Glossina morsitans
morsitans]
Length = 433
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 125/260 (48%), Positives = 159/260 (61%), Gaps = 34/260 (13%)
Query: 121 LREELQLLQ-EQGSYVGEVVKPM----DKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCR 175
L + Q+LQ EQ V K + D K ++ V KFVVD+ ++ D+ R
Sbjct: 80 LAADKQILQNEQPLQVARCTKIINADSDDPKYIINVKQFAKFVVDLADSVAPTDIEEGMR 139
Query: 176 VALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPE 235
V + Y +H LP K+DP V++M VE PD TY VGG QI++++EV+E P+ HPE
Sbjct: 140 VGVDRNKYQIHIPLPPKIDPTVTMMQVEDKPDVTYSDVGGCKEQIEKLREVVETPLLHPE 199
Query: 236 LFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRE 295
F LGI PKGVLL+GPPGTGKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRE
Sbjct: 200 KFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRE 259
Query: 296 LFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSG 355
LF MA KK C +IF DEID+IG +R + G+G
Sbjct: 260 LFEMARSKK---------------------AC--------LIFFDEIDAIGGARFDDGAG 290
Query: 356 GDSEVQRTMLELLNQLDGFE 375
GD+EVQRTMLEL+NQLDGF+
Sbjct: 291 GDNEVQRTMLELINQLDGFD 310
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 220 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARSK 267
>gi|14590135|ref|NP_142199.1| proteasome-activating nucleotidase [Pyrococcus horikoshii OT3]
gi|20532203|sp|O57940.1|PAN_PYRHO RecName: Full=Proteasome-activating nucleotidase; Short=PAN;
AltName: Full=Proteasomal ATPase; AltName:
Full=Proteasome regulatory ATPase; AltName:
Full=Proteasome regulatory particle
gi|3256587|dbj|BAA29270.1| 399aa long hypothetical 26S protease regulatory subunit [Pyrococcus
horikoshii OT3]
Length = 399
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 120/294 (40%), Positives = 180/294 (61%), Gaps = 29/294 (9%)
Query: 82 FKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKP 141
F+ Y I L+ + + E +R L+A + L ++ LR E+ L++ ++ G V++
Sbjct: 11 FQGDYDDYITYLKRRIRQLELQVRMLEADKERLERELSRLRSEMSRLRQPPAFAGTVIEV 70
Query: 142 MDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMM 201
+D+ + +V+ + +FVV I ID + P RVAL + + +ILP DP V
Sbjct: 71 LDEDRAIVQNYNGPRFVVRIAPWIDRKKLRPGTRVALDQRTMAVVEILPTSKDPTVLGFE 130
Query: 202 VEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLL 261
V + P+ TY +GGL Q++E++E IELP+KHPELF+ +GI PKGVLLYGPPG GKTL+
Sbjct: 131 VIERPNVTYNDIGGLKKQLQELREAIELPLKHPELFEEVGIDPPKGVLLYGPPGCGKTLM 190
Query: 262 ARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTIL 321
A+A+AH TFIRV GSELV+K+IGEG+R+V ELF +A
Sbjct: 191 AKALAHEVNATFIRVVGSELVRKYIGEGARLVHELFELA--------------------- 229
Query: 322 TNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
+E AP+IIF+DEID+IG+ R++ +GG+ EV RT+++LL ++DGF+
Sbjct: 230 --------KEKAPTIIFIDEIDAIGAKRMDETTGGEREVNRTLMQLLAEMDGFD 275
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 40/50 (80%)
Query: 13 GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
GKTL+A+A+AH TFIRV GSELV+K+IGEG+R+V ELF +A+ K +
Sbjct: 186 GKTLMAKALAHEVNATFIRVVGSELVRKYIGEGARLVHELFELAKEKAPT 235
>gi|348542493|ref|XP_003458719.1| PREDICTED: 26S protease regulatory subunit 7-like [Oreochromis
niloticus]
Length = 433
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 116/230 (50%), Positives = 147/230 (63%), Gaps = 29/230 (12%)
Query: 146 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
K ++ V KFVVD+ + D+ RV + Y +H LP K+DP V++M VE+
Sbjct: 110 KYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEK 169
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
PD TY VGG QI++++EV+E P+ HPE F LGI PKGVLL+GPPGTGKTL ARAV
Sbjct: 170 PDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 229
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTI 325
A+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 230 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKK--------------------- 268
Query: 326 VCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C +IF DEID+IG +R + G+GGD+EVQRTMLEL+NQLDGF+
Sbjct: 269 AC--------LIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFD 310
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 220 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTK 267
>gi|57642187|ref|YP_184665.1| proteasome-activating nucleotidase [Thermococcus kodakarensis KOD1]
gi|73921838|sp|Q5JHS5.1|PAN_PYRKO RecName: Full=Proteasome-activating nucleotidase; Short=PAN;
AltName: Full=Proteasomal ATPase; AltName:
Full=Proteasome regulatory ATPase; AltName:
Full=Proteasome regulatory particle
gi|57160511|dbj|BAD86441.1| proteasome-activating nucleotidase [Thermococcus kodakarensis KOD1]
Length = 397
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 121/306 (39%), Positives = 188/306 (61%), Gaps = 33/306 (10%)
Query: 70 MDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQ 129
M ++ EG+ Y + L+ + + E +R L+A + L ++ LR E+ L+
Sbjct: 1 MSIENTDVHPEGYDDY----VTFLKRRIRQLELQVRTLEADKERLERELSRLRMEMSRLR 56
Query: 130 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKIL 189
+ ++ G V++ +D ++ +V+ + +FVV I I+ + + P RVAL + + ++L
Sbjct: 57 QPPAFAGNVIEVLDDERAIVQNYNGPRFVVRIAPWIERDKLKPGARVALDQRTMAIVELL 116
Query: 190 PNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVL 249
P++ DP V V + P TY +GGL+ Q++E++E IELP+KHPELF+ +GI PKGVL
Sbjct: 117 PSEKDPSVLGFEVIERPKVTYNDIGGLEKQLQELREAIELPLKHPELFEQVGIEPPKGVL 176
Query: 250 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAH 309
LYGPPG GKTL+A+AVA+H TFIRV GSELV+KFIGEG+R+V ELF +A
Sbjct: 177 LYGPPGCGKTLMAKAVANHVNATFIRVVGSELVRKFIGEGARLVHELFELA--------- 227
Query: 310 HPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN 369
+E AP+IIF+DEID+IG+ R++ +GG+ EV RT+++LL
Sbjct: 228 --------------------KEKAPTIIFIDEIDAIGAKRMDETTGGEREVNRTLMQLLA 267
Query: 370 QLDGFE 375
++DGF+
Sbjct: 268 EMDGFD 273
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/50 (64%), Positives = 41/50 (82%)
Query: 13 GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
GKTL+A+AVA+H TFIRV GSELV+KFIGEG+R+V ELF +A+ K +
Sbjct: 184 GKTLMAKAVANHVNATFIRVVGSELVRKFIGEGARLVHELFELAKEKAPT 233
>gi|346469537|gb|AEO34613.1| hypothetical protein [Amblyomma maculatum]
Length = 435
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 116/230 (50%), Positives = 149/230 (64%), Gaps = 29/230 (12%)
Query: 146 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
K ++ V KFVVD+ ++ D+ RV + Y +H LP K+DP V++M VE+
Sbjct: 112 KYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEK 171
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
PD TY VGG QI++++EV+E+P+ HPE F LGI PKGVLL+GPPGTGKTL ARAV
Sbjct: 172 PDVTYADVGGCKEQIEKLREVVEMPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 231
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTI 325
A+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 232 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARSKK--------------------- 270
Query: 326 VCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C +IF DEID+IG +R + G+GGD+EVQRTMLEL+NQLDGF+
Sbjct: 271 AC--------LIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFD 312
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 222 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARSK 269
>gi|28278099|gb|AAH45087.1| Psmc6 protein, partial [Xenopus laevis]
Length = 403
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 119/278 (42%), Positives = 165/278 (59%), Gaps = 29/278 (10%)
Query: 99 EKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFV 158
E + L+ L+ Q EL + +L+ LQ G VGEV+K + ++K +VK ++V
Sbjct: 35 EIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYV 94
Query: 159 VDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDN 218
V + +D + + P RVAL + T+ + LP +VDPLV M E D +Y +GGL
Sbjct: 95 VGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDVSYSEIGGLSE 154
Query: 219 QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSG 278
QI+E++EVIELP+ +PELF +GI PKG LLYGPPGTGKTLLARAVA +C F++V
Sbjct: 155 QIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVS 214
Query: 279 SELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIF 338
S +V K+IGE +R++RE+F A R+H P IIF
Sbjct: 215 SSIVDKYIGESARLIREMFNYA-----------------------------RDHQPCIIF 245
Query: 339 MDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
MDEID+IG R G+ D E+QRT++ELLNQ+DGF+
Sbjct: 246 MDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDT 283
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 35/46 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA +C F++V S +V K+IGE +R++RE+F AR
Sbjct: 192 TGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYAR 237
>gi|17137738|ref|NP_477473.1| regulatory particle triple-A ATPase 1 [Drosophila melanogaster]
gi|6434952|gb|AAF08388.1|AF145307_1 26S proteasome regulatory complex subunit p48B [Drosophila
melanogaster]
gi|7304183|gb|AAF59219.1| regulatory particle triple-A ATPase 1 [Drosophila melanogaster]
gi|16769870|gb|AAL29154.1| SD07148p [Drosophila melanogaster]
gi|220946836|gb|ACL85961.1| Rpt1-PA [synthetic construct]
Length = 433
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 125/260 (48%), Positives = 159/260 (61%), Gaps = 34/260 (13%)
Query: 121 LREELQLLQ-EQGSYVGEVVKPM----DKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCR 175
L + Q+LQ EQ V K + D K ++ V KFVVD+ ++ D+ R
Sbjct: 80 LAADKQILQNEQPLQVARCTKIINADSDDPKYIINVKQFAKFVVDLADSVAPTDIEEGMR 139
Query: 176 VALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPE 235
V + Y +H LP K+DP V++M VE PD TY VGG QI++++EV+E P+ HPE
Sbjct: 140 VGVDRNKYQIHIPLPPKIDPTVTMMQVEDKPDVTYSDVGGCKEQIEKLREVVETPLLHPE 199
Query: 236 LFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRE 295
F LGI PKGVLL+GPPGTGKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRE
Sbjct: 200 KFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRE 259
Query: 296 LFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSG 355
LF MA KK C +IF DEID+IG +R + G+G
Sbjct: 260 LFEMARSKK---------------------AC--------LIFFDEIDAIGGARFDDGAG 290
Query: 356 GDSEVQRTMLELLNQLDGFE 375
GD+EVQRTMLEL+NQLDGF+
Sbjct: 291 GDNEVQRTMLELINQLDGFD 310
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 220 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARSK 267
>gi|354480225|ref|XP_003502308.1| PREDICTED: 26S protease regulatory subunit 7-like [Cricetulus
griseus]
Length = 546
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 116/230 (50%), Positives = 147/230 (63%), Gaps = 29/230 (12%)
Query: 146 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
K ++ V KFVVD+ + D+ RV + Y +H LP K+DP V++M VE+
Sbjct: 223 KYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEK 282
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
PD TY VGG QI++++EV+E P+ HPE F LGI PKGVLL+GPPGTGKTL ARAV
Sbjct: 283 PDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 342
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTI 325
A+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 343 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKK--------------------- 381
Query: 326 VCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C +IF DEID+IG +R + G+GGD+EVQRTMLEL+NQLDGF+
Sbjct: 382 AC--------LIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFD 423
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 333 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTK 380
>gi|225707392|gb|ACO09542.1| 26S protease regulatory subunit 7 [Osmerus mordax]
Length = 433
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 116/230 (50%), Positives = 147/230 (63%), Gaps = 29/230 (12%)
Query: 146 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
K ++ V KFVVD+ + D+ RV + Y +H LP K+DP V++M VE+
Sbjct: 110 KYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEK 169
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
PD TY VGG QI++++EV+E P+ HPE F LGI PKGVLL+GPPGTGKTL ARAV
Sbjct: 170 PDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 229
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTI 325
A+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 230 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKK--------------------- 268
Query: 326 VCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C +IF DEID+IG +R + G+GGD+EVQRTMLEL+NQLDGF+
Sbjct: 269 AC--------LIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFD 310
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 220 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTK 267
>gi|390466836|ref|XP_002751728.2| PREDICTED: 26S protease regulatory subunit 7 [Callithrix jacchus]
Length = 437
Score = 224 bits (572), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 116/230 (50%), Positives = 147/230 (63%), Gaps = 29/230 (12%)
Query: 146 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
K ++ V KFVVD+ + D+ RV + Y +H LP K+DP V++M VE+
Sbjct: 114 KYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEK 173
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
PD TY VGG QI++++EV+E P+ HPE F LGI PKGVLL+GPPGTGKTL ARAV
Sbjct: 174 PDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 233
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTI 325
A+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 234 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKK--------------------- 272
Query: 326 VCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C +IF DEID+IG +R + G+GGD+EVQRTMLEL+NQLDGF+
Sbjct: 273 AC--------LIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFD 314
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 224 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTK 271
>gi|255071147|ref|XP_002507655.1| predicted protein [Micromonas sp. RCC299]
gi|226522930|gb|ACO68913.1| predicted protein [Micromonas sp. RCC299]
Length = 427
Score = 224 bits (572), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 134/324 (41%), Positives = 188/324 (58%), Gaps = 54/324 (16%)
Query: 70 MDVDE-AIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNEL-----------NAK 117
+D D+ A+ + G PY + I+ L E +LR + + NEL
Sbjct: 19 LDADDIALLKTYGLGPYS-SSIKTL-------ETDLRNISNRVNELCGIKESDTGLAQPS 70
Query: 118 VRMLREELQLLQE----QGSYVGEVVKP-MDKKKVLVKVHPEGKFVVDIDKNIDINDVTP 172
L ++ Q++QE Q + +++ P D + ++ V KFVV + +++ D+
Sbjct: 71 QWDLTQDKQVMQEEQPLQVARCTKIINPNTDDAQYIINVKQIAKFVVGLGQHVAPTDIEE 130
Query: 173 NCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVK 232
RV + Y +H LP K+DP V++M VE+ PD TY VGG +Q+++++EV+ELP+
Sbjct: 131 GMRVGVDRTKYFIHIPLPPKIDPSVTMMTVEEKPDVTYNDVGGSKDQVEKLREVVELPLL 190
Query: 233 HPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRM 292
HPE F LGI PKGVL YGPPGTGKTLLARAVA+ T+ FIRV GSELVQK++GEG+R+
Sbjct: 191 HPEKFVQLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARL 250
Query: 293 VRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIES 352
VRELF MA KK C +IF DE+D+IG +R +
Sbjct: 251 VRELFQMARSKK---------------------AC--------LIFFDEVDAIGGARFDD 281
Query: 353 GSGGDSEVQRTMLELLNQLDGFEA 376
G GGD+EVQRTMLE++NQLDGF+A
Sbjct: 282 GQGGDNEVQRTMLEIVNQLDGFDA 305
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTLLARAVA+ T+ FIRV GSELVQK++GEG+R+VRELF MAR K
Sbjct: 214 TGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARLVRELFQMARSK 261
>gi|193695148|ref|XP_001948503.1| PREDICTED: 26S protease regulatory subunit 7-like [Acyrthosiphon
pisum]
Length = 437
Score = 224 bits (572), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 117/233 (50%), Positives = 148/233 (63%), Gaps = 29/233 (12%)
Query: 143 DKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMV 202
D K ++ V KFVVD+ ++ D+ RV + Y +H LP K+DP V++M V
Sbjct: 111 DDPKYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQV 170
Query: 203 EKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 262
E+ PD TY VGG QI +++EV+E P+ HPE F LGI PKGVLL+GPPGTGKTL A
Sbjct: 171 EEKPDVTYSDVGGCKEQIDKLREVVETPLLHPEKFVNLGIEPPKGVLLFGPPGTGKTLCA 230
Query: 263 RAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILT 322
RAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 231 RAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARSKK------------------ 272
Query: 323 NTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C +IF DEID+IG +R + G+GGD+EVQRTMLEL+NQLDGF+
Sbjct: 273 ---AC--------LIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFD 314
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 224 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARSK 271
>gi|49258183|gb|AAH73644.1| Psmc6 protein, partial [Xenopus laevis]
Length = 392
Score = 224 bits (572), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 119/278 (42%), Positives = 165/278 (59%), Gaps = 29/278 (10%)
Query: 99 EKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFV 158
E + L+ L+ Q EL + +L+ LQ G VGEV+K + ++K +VK ++V
Sbjct: 24 EIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYV 83
Query: 159 VDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDN 218
V + +D + + P RVAL + T+ + LP +VDPLV M E D +Y +GGL
Sbjct: 84 VGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDVSYSEIGGLSE 143
Query: 219 QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSG 278
QI+E++EVIELP+ +PELF +GI PKG LLYGPPGTGKTLLARAVA +C F++V
Sbjct: 144 QIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVS 203
Query: 279 SELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIF 338
S +V K+IGE +R++RE+F A R+H P IIF
Sbjct: 204 SSIVDKYIGESARLIREMFNYA-----------------------------RDHQPCIIF 234
Query: 339 MDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
MDEID+IG R G+ D E+QRT++ELLNQ+DGF+
Sbjct: 235 MDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDT 272
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 35/46 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA +C F++V S +V K+IGE +R++RE+F AR
Sbjct: 181 TGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYAR 226
>gi|410722363|ref|ZP_11361664.1| 26S proteasome subunit P45 family [Methanobacterium sp. Maddingley
MBC34]
gi|410597107|gb|EKQ51744.1| 26S proteasome subunit P45 family [Methanobacterium sp. Maddingley
MBC34]
Length = 410
Score = 224 bits (571), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 114/270 (42%), Positives = 172/270 (63%), Gaps = 29/270 (10%)
Query: 107 LQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNID 166
++ ++ L+ +V+ LR E++ + + V + +D+ KV+VK FV+ + +D
Sbjct: 47 IENEKMRLDREVKSLRGEIERFRSPPLVIATVTEVLDEGKVVVKSSTGPHFVIGYSRFLD 106
Query: 167 INDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEV 226
+ P RVAL +++++ +LP++ DPLV+ M VE+ P+ +Y +GGL+ QI EIKE
Sbjct: 107 EKSLEPGARVALNQQTFSIVSVLPSEKDPLVTGMEVEEKPNVSYAKIGGLEEQIVEIKET 166
Query: 227 IELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFI 286
+ELP+K PELF +GI PKGVLLYGPPGTGKTLLA+AVAH T TFI++ SE V+K+I
Sbjct: 167 VELPLKKPELFTKIGIEPPKGVLLYGPPGTGKTLLAKAVAHETNATFIKIVASEFVKKYI 226
Query: 287 GEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIG 346
GEG+R+VR +F +A +E +PSIIF+DEID+I
Sbjct: 227 GEGARLVRGVFELA-----------------------------KEKSPSIIFIDEIDAIA 257
Query: 347 SSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
+ R++S + GD EVQRT+++LL ++DGFE
Sbjct: 258 AKRLKSSTSGDREVQRTLMQLLAEMDGFEG 287
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 40/51 (78%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
+GKTLLA+AVAH T TFI++ SE V+K+IGEG+R+VR +F +A+ K S
Sbjct: 196 TGKTLLAKAVAHETNATFIKIVASEFVKKYIGEGARLVRGVFELAKEKSPS 246
>gi|195448324|ref|XP_002071607.1| GK10072 [Drosophila willistoni]
gi|194167692|gb|EDW82593.1| GK10072 [Drosophila willistoni]
Length = 433
Score = 224 bits (571), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 125/260 (48%), Positives = 159/260 (61%), Gaps = 34/260 (13%)
Query: 121 LREELQLLQ-EQGSYVGEVVKPM----DKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCR 175
L + Q+LQ EQ V K + D K ++ V KFVVD+ ++ D+ R
Sbjct: 80 LAADKQILQNEQPLQVARCTKIINADSDDPKYIINVKQFAKFVVDLADSVAPTDIEEGMR 139
Query: 176 VALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPE 235
V + Y +H LP K+DP V++M VE PD TY VGG QI++++EV+E P+ HPE
Sbjct: 140 VGVDRNKYQIHIPLPPKIDPTVTMMQVEDKPDVTYSDVGGCKEQIEKLREVVETPLLHPE 199
Query: 236 LFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRE 295
F LGI PKGVLL+GPPGTGKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRE
Sbjct: 200 KFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRE 259
Query: 296 LFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSG 355
LF MA KK C +IF DEID+IG +R + G+G
Sbjct: 260 LFEMARSKK---------------------AC--------LIFFDEIDAIGGARFDDGAG 290
Query: 356 GDSEVQRTMLELLNQLDGFE 375
GD+EVQRTMLEL+NQLDGF+
Sbjct: 291 GDNEVQRTMLELINQLDGFD 310
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 220 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARSK 267
>gi|54287934|gb|AAV31414.1| 26S protease regulatory subunit-like protein [Toxoptera citricida]
Length = 437
Score = 224 bits (571), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 117/233 (50%), Positives = 148/233 (63%), Gaps = 29/233 (12%)
Query: 143 DKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMV 202
D K ++ V KFVVD+ ++ D+ RV + Y +H LP K+DP V++M V
Sbjct: 111 DDPKYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQV 170
Query: 203 EKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 262
E+ PD TY VGG QI +++EV+E P+ HPE F LGI PKGVLL+GPPGTGKTL A
Sbjct: 171 EEKPDVTYSDVGGCKEQIDKLREVVETPLLHPEKFVNLGIEPPKGVLLFGPPGTGKTLCA 230
Query: 263 RAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILT 322
RAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 231 RAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARSKK------------------ 272
Query: 323 NTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C +IF DEID+IG +R + G+GGD+EVQRTMLEL+NQLDGF+
Sbjct: 273 ---AC--------LIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFD 314
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 224 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARSK 271
>gi|335308136|ref|XP_003361115.1| PREDICTED: 26S protease regulatory subunit 7-like [Sus scrofa]
Length = 480
Score = 224 bits (571), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 116/230 (50%), Positives = 147/230 (63%), Gaps = 29/230 (12%)
Query: 146 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
K ++ V KFVVD+ + D+ RV + Y +H LP K+DP V++M VE+
Sbjct: 157 KYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEK 216
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
PD TY VGG QI++++EV+E P+ HPE F LGI PKGVLL+GPPGTGKTL ARAV
Sbjct: 217 PDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 276
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTI 325
A+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 277 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKK--------------------- 315
Query: 326 VCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C +IF DEID+IG +R + G+GGD+EVQRTMLEL+NQLDGF+
Sbjct: 316 AC--------LIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFD 357
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 267 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTK 314
>gi|3914449|sp|O64982.1|PRS7_PRUPE RecName: Full=26S protease regulatory subunit 7; AltName: Full=26S
proteasome AAA-ATPase subunit RPT1; AltName: Full=26S
proteasome subunit 7; AltName: Full=Regulatory particle
triple-A ATPase subunit 1
gi|3172331|gb|AAC18523.1| 26S proteasome subunit 7 [Prunus persica]
Length = 425
Score = 224 bits (571), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 132/312 (42%), Positives = 182/312 (58%), Gaps = 37/312 (11%)
Query: 73 DEAIKSSEGFKPY--YVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRM-LREELQLLQ 129
D A+ + G PY ++ K E+ +A+K +L ++ L A + L + Q++Q
Sbjct: 21 DIALLKTYGLGPYSTHIKKAEKEVKDLAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQ 80
Query: 130 E----QGSYVGEVVKP-MDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYT 184
E Q + +++ P + K ++ V KFVV + + D+ RV + Y
Sbjct: 81 EEQPLQVARCTKIINPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQ 140
Query: 185 LHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQ 244
+ LP K+DP V++M VE+ PD TY VGG QI++++EV+ELP+ HPE F LGI
Sbjct: 141 IQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDP 200
Query: 245 PKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKK 304
PKGVL YGPPGTGKTLLARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 201 PKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKK 260
Query: 305 LAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTM 364
I+F DE+D+IG +R + G GGD+EVQRTM
Sbjct: 261 AC-----------------------------IVFFDEVDAIGGARFDDGVGGDNEVQRTM 291
Query: 365 LELLNQLDGFEA 376
LE++NQLDGF+A
Sbjct: 292 LEIVNQLDGFDA 303
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTLLARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 212 TGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSK 259
>gi|355572388|ref|ZP_09043532.1| Proteasome-activating nucleotidase [Methanolinea tarda NOBI-1]
gi|354824762|gb|EHF09004.1| Proteasome-activating nucleotidase [Methanolinea tarda NOBI-1]
Length = 412
Score = 224 bits (571), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 124/288 (43%), Positives = 172/288 (59%), Gaps = 29/288 (10%)
Query: 88 TKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKV 147
T+ EL+ + + E + R ++ Q+ +VR L+ E++ L+ +G + +D +V
Sbjct: 30 TRNLELREQIRQIESDKRYIETQKIRYEREVRKLKSEIEQLRSPPLIIGTITDVLDNGRV 89
Query: 148 LVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPD 207
+V+ +F+V ID + P R L +S + ILP D V M V + PD
Sbjct: 90 VVRSSAGPRFMVRSSMCIDPEKLKPGVRCTLNQQSLAVIDILPESYDAQVYGMEVVESPD 149
Query: 208 STYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAH 267
TY +GGLD QI EI+E +ELP++ PELF+ +GI PKGVLL+GPPGTGKTLLARAVAH
Sbjct: 150 ETYADIGGLDAQINEIREAVELPLRRPELFERVGIEPPKGVLLHGPPGTGKTLLARAVAH 209
Query: 268 HTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVC 327
T F+RV GSELVQK+IGEG+R+VRELF +A K
Sbjct: 210 ETNAHFLRVVGSELVQKYIGEGARLVRELFDLAKKK------------------------ 245
Query: 328 NFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
AP+IIF+DEID++G+SR ES + GD EVQRT+++LL +DGFE
Sbjct: 246 -----APTIIFIDEIDAVGASRTESTTSGDREVQRTLMQLLAGMDGFE 288
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 42/51 (82%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
+GKTLLARAVAH T F+RV GSELVQK+IGEG+R+VRELF +A+ K +
Sbjct: 198 TGKTLLARAVAHETNAHFLRVVGSELVQKYIGEGARLVRELFDLAKKKAPT 248
>gi|355763161|gb|EHH62123.1| hypothetical protein EGM_20328, partial [Macaca fascicularis]
Length = 440
Score = 224 bits (571), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 121/276 (43%), Positives = 168/276 (60%), Gaps = 29/276 (10%)
Query: 101 EQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVD 160
E+ R Q Q L K R + L+ VG + + +D +V + V
Sbjct: 75 EEEFIRNQEQMKPLEEKQEEERSKGDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVS 134
Query: 161 IDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQI 220
I +D + + P C V L ++ + + +L + DPLV++M VEK P TY +GGLDNQI
Sbjct: 135 ILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQI 194
Query: 221 KEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSE 280
+EIKE +ELP+ HPE ++ +GI PKGV+LYGPPGTGKTLLA+AVA+ T TF+RV GSE
Sbjct: 195 QEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSE 254
Query: 281 LVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMD 340
L+QK++G+G ++VRELF +A EHAPSI+F+D
Sbjct: 255 LIQKYLGDGPKLVRELFRVAE-----------------------------EHAPSIVFID 285
Query: 341 EIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
EID+IG+ R +S SGG+ E+QRTMLELL+QLDGF++
Sbjct: 286 EIDAIGTKRYDSNSGGEREIQRTMLELLHQLDGFDS 321
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 230 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 274
>gi|312384064|gb|EFR28883.1| hypothetical protein AND_02632 [Anopheles darlingi]
gi|312384065|gb|EFR28884.1| hypothetical protein AND_02633 [Anopheles darlingi]
Length = 438
Score = 224 bits (571), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 120/288 (41%), Positives = 176/288 (61%), Gaps = 33/288 (11%)
Query: 89 KIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVL 148
+I++ L+ E +N RL+ Q K+ R ++ L+ VG + + +D +
Sbjct: 65 RIKDYLLMEEEFIRNQERLKPQEE----KIEEERSKVDDLRGTPMSVGTLEEIIDDNHAI 120
Query: 149 VKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDS 208
V + V I +D + + P C V L ++ + + +L + DP+V++M +EK P
Sbjct: 121 VSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLGDDTDPMVTVMKLEKAPQE 180
Query: 209 TYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH 268
TY +GGLD QI+EIKE +ELP+ HPE ++ +GI PKGV+LYGPPGTGKTLLA+AVA+
Sbjct: 181 TYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQ 240
Query: 269 TECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCN 328
T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 241 TSATFLRVVGSELIQKYLGDGPKLVRELFRVAE--------------------------- 273
Query: 329 FREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
EHAPSI+F+DEID++G+ R +S SGG+ E+QRTMLELLNQLDGF++
Sbjct: 274 --EHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDS 319
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 228 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 272
>gi|363806968|ref|NP_001242057.1| uncharacterized protein LOC100808239 [Glycine max]
gi|255641390|gb|ACU20972.1| unknown [Glycine max]
Length = 426
Score = 224 bits (571), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 132/312 (42%), Positives = 182/312 (58%), Gaps = 37/312 (11%)
Query: 73 DEAIKSSEGFKPYY--VTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRM-LREELQLLQ 129
D A+ + G PY + K+E+ +A+K +L ++ L A + L + Q++Q
Sbjct: 22 DIALLKTYGLGPYSTSIKKVEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQ 81
Query: 130 E----QGSYVGEVVKP-MDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYT 184
E Q + +++ P + K ++ V KFVV + + D+ RV + Y
Sbjct: 82 EEQPLQVARCTKIINPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQ 141
Query: 185 LHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQ 244
+ LP K+DP V++M VE+ PD TY VGG QI++++EV+ELP+ HPE F LGI
Sbjct: 142 IQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDP 201
Query: 245 PKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKK 304
PKGVL YGPPGTGKTLLARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 202 PKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKK 261
Query: 305 LAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTM 364
I+F DE+D+IG +R + G GGD+EVQRTM
Sbjct: 262 AC-----------------------------IVFFDEVDAIGGARFDDGVGGDNEVQRTM 292
Query: 365 LELLNQLDGFEA 376
LE++NQLDGF+A
Sbjct: 293 LEIVNQLDGFDA 304
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTLLARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 213 TGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSK 260
>gi|18976487|ref|NP_577844.1| proteasome-activating nucleotidase [Pyrococcus furiosus DSM 3638]
gi|397652173|ref|YP_006492754.1| proteasome-activating nucleotidase [Pyrococcus furiosus COM1]
gi|22096009|sp|Q8U4H3.1|PAN_PYRFU RecName: Full=Proteasome-activating nucleotidase; Short=PAN;
AltName: Full=Proteasomal ATPase; AltName:
Full=Proteasome regulatory ATPase; AltName:
Full=Proteasome regulatory particle
gi|18892030|gb|AAL80239.1| ATP-dependent 26S protease regulatory subunit [Pyrococcus furiosus
DSM 3638]
gi|393189764|gb|AFN04462.1| proteasome-activating nucleotidase [Pyrococcus furiosus COM1]
Length = 396
Score = 224 bits (571), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 119/294 (40%), Positives = 179/294 (60%), Gaps = 29/294 (9%)
Query: 82 FKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKP 141
F Y + L+ + + E +R L+A + L ++ LR E+ L++ ++ G V++
Sbjct: 8 FHGNYDDYVTYLKRRIRQLELQVRMLEADKERLERELSRLRSEMSRLRQPPAFAGSVIEV 67
Query: 142 MDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMM 201
+D + +V+ + +FVV I ID + + P RVAL + + +ILP DP V
Sbjct: 68 LDDDRAIVQNYNGPRFVVRIAPWIDKSKLRPGTRVALDQRTMAIIEILPASKDPAVLGFE 127
Query: 202 VEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLL 261
V + P+ TY +GGL Q++E++E IELP+KHPELF+ +GI PKGVLLYGPPG GKTL+
Sbjct: 128 VVERPNVTYNDIGGLKKQLQELREAIELPLKHPELFEEVGIDPPKGVLLYGPPGCGKTLM 187
Query: 262 ARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTIL 321
A+A+AH TFIRV GSELV+K+IGEG+R+V ELF +A
Sbjct: 188 AKAIAHEVNATFIRVVGSELVRKYIGEGARLVHELFELA--------------------- 226
Query: 322 TNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
+E AP+IIF+DEID+IG+ R++ +GG+ EV RT+++LL ++DGF+
Sbjct: 227 --------KEKAPTIIFIDEIDAIGAKRLDETTGGEREVNRTLMQLLAEMDGFD 272
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 40/50 (80%)
Query: 13 GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
GKTL+A+A+AH TFIRV GSELV+K+IGEG+R+V ELF +A+ K +
Sbjct: 183 GKTLMAKAIAHEVNATFIRVVGSELVRKYIGEGARLVHELFELAKEKAPT 232
>gi|393221025|gb|EJD06510.1| 26S proteasome subunit P45 [Fomitiporia mediterranea MF3/22]
Length = 447
Score = 224 bits (571), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 126/291 (43%), Positives = 180/291 (61%), Gaps = 38/291 (13%)
Query: 89 KIEELQLIVAEKEQNLRRL--QAQRNELNAKVRMLREELQLLQEQGS--YVGEVVKPMDK 144
+I++ L+ E QN RL ++ R E N + R ++L+ GS VG + + +D
Sbjct: 71 RIKDYLLLEEEFIQNQERLRPESAREEKNEEDRTKVDDLR-----GSPMAVGTLEEIIDD 125
Query: 145 KKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEK 204
++ +F V I +D + + P C V L +++ + +L + DP+VS+M ++K
Sbjct: 126 DHAIISTSSGPEFYVSIMSFVDKDALEPGCSVLLHHKNQAVVGVLEDDTDPMVSVMKLDK 185
Query: 205 VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 264
P +Y VGGLD QI+EIKE +ELP+ HPEL++ +GI PKGV+LYG PGTGKTLLA+A
Sbjct: 186 APTESYADVGGLDQQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGVPGTGKTLLAKA 245
Query: 265 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNT 324
VA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 246 VANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAE----------------------- 282
Query: 325 IVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
EHAPSI+F+DEID+IG+ R ES SGG+ E+QRTMLELLNQLDGF+
Sbjct: 283 ------EHAPSIVFIDEIDAIGTKRYESTSGGEREIQRTMLELLNQLDGFD 327
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 237 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 281
>gi|343961529|dbj|BAK62354.1| 26S protease regulatory subunit 7 [Pan troglodytes]
Length = 433
Score = 224 bits (571), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 116/230 (50%), Positives = 146/230 (63%), Gaps = 29/230 (12%)
Query: 146 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
K ++ V KFVVD+ + D+ RV + Y +H LP K+DP V++M VE+
Sbjct: 110 KYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEK 169
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
PD TY VGG QI++++EV+E P+ HPE F LGI PKGVLL+GPPGTGKTL ARAV
Sbjct: 170 PDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 229
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTI 325
A+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 230 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKK--------------------- 268
Query: 326 VCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C +IF DEID IG +R + G+GGD+EVQRTMLEL+NQLDGF+
Sbjct: 269 AC--------LIFFDEIDGIGGARFDDGAGGDNEVQRTMLELINQLDGFD 310
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 220 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTK 267
>gi|240103465|ref|YP_002959774.1| proteasome-activating nucleotidase [Thermococcus gammatolerans EJ3]
gi|259535124|sp|C5A6P8.1|PAN_THEGJ RecName: Full=Proteasome-activating nucleotidase; Short=PAN;
AltName: Full=Proteasomal ATPase; AltName:
Full=Proteasome regulatory ATPase; AltName:
Full=Proteasome regulatory particle
gi|239911019|gb|ACS33910.1| ATP-dependent 26S proteasome regulatory subunit P45 family
[Thermococcus gammatolerans EJ3]
Length = 397
Score = 224 bits (571), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 119/290 (41%), Positives = 180/290 (62%), Gaps = 29/290 (10%)
Query: 86 YVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKK 145
Y I L+ + + E +R L+A + L ++ LR E+ L++ ++ G V++ +D
Sbjct: 13 YEDYITFLKRRIRQLELQVRTLEADKERLERELSRLRTEMSRLRQPPAFAGTVIEVLDDD 72
Query: 146 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
+ +V+ + +FVV I I+ + + P RVAL + + ++LP + DP V V +
Sbjct: 73 RAIVQNYNGPRFVVRIAPWIERDKLKPGSRVALDQRTMAIVELLPTEKDPSVLGFEVIEK 132
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
P TY+ +GGL+ Q+ E++E +ELP+KHPELF+ +GI PKGVLLYGPPG GKTL+A+AV
Sbjct: 133 PRVTYQDIGGLERQLAELREAVELPLKHPELFEKVGIEPPKGVLLYGPPGCGKTLMAKAV 192
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTI 325
A+H TFIRV GSELV+KFIGEG+R+V ELF MA
Sbjct: 193 ANHVNATFIRVVGSELVRKFIGEGARLVHELFEMA------------------------- 227
Query: 326 VCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
+E AP+IIF+DEID+IG+ R++ +GG+ EV RT+++LL ++DGF+
Sbjct: 228 ----KEKAPTIIFIDEIDAIGAKRMDETTGGEREVNRTLMQLLAEMDGFD 273
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/50 (66%), Positives = 41/50 (82%)
Query: 13 GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
GKTL+A+AVA+H TFIRV GSELV+KFIGEG+R+V ELF MA+ K +
Sbjct: 184 GKTLMAKAVANHVNATFIRVVGSELVRKFIGEGARLVHELFEMAKEKAPT 233
>gi|82704989|ref|XP_726782.1| 26S proteasome subunit 4 protein [Plasmodium yoelii yoelii 17XNL]
gi|23482335|gb|EAA18347.1| 26S proteasome subunit 4-like protein [Plasmodium yoelii yoelii]
Length = 447
Score = 224 bits (571), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 112/230 (48%), Positives = 158/230 (68%), Gaps = 31/230 (13%)
Query: 147 VLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVP 206
+ V PE + V+I +D + + P C V L N++ ++ IL ++VDPLVS+M VEK P
Sbjct: 130 IATSVGPE--YYVNILSFVDKDLLEPGCSVLLNNKTNSVVGILLDEVDPLVSVMKVEKAP 187
Query: 207 DSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVA 266
+Y +GGL++QI+EIKE +ELP+ HPEL++ +GI PKGV+LYGPPGTGKTLLA+AVA
Sbjct: 188 LESYADIGGLESQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGPPGTGKTLLAKAVA 247
Query: 267 HHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIV 326
+ T TF+RV GSEL+QK++G+G ++VRE+F +A
Sbjct: 248 NETSATFLRVVGSELIQKYLGDGPKLVREMFKVA-------------------------- 281
Query: 327 CNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
+HAPSI+F+DEID++G+ R E+ SGG+ E+QRTMLELLNQLDGF++
Sbjct: 282 ---EDHAPSIVFIDEIDAVGTKRYEATSGGEREIQRTMLELLNQLDGFDS 328
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRE+F +A
Sbjct: 237 TGKTLLAKAVANETSATFLRVVGSELIQKYLGDGPKLVREMFKVA 281
>gi|341038686|gb|EGS23678.1| 26S protease subunit RPT4 (26S protease subunit SUG2)-like protein
[Chaetomium thermophilum var. thermophilum DSM 1495]
Length = 391
Score = 224 bits (571), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 119/277 (42%), Positives = 167/277 (60%), Gaps = 29/277 (10%)
Query: 99 EKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFV 158
E E L+ L+ + EL + E ++ LQ G VGEV+K +D ++ +VK ++V
Sbjct: 23 EWETKLKNLRLEIKELQKEYDRTEENIKALQSVGQIVGEVLKQLDDERFIVKASSGPRYV 82
Query: 159 VDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDN 218
V +D + + RVAL + T+ ++LP +VDPLV M +E ++ +GGL++
Sbjct: 83 VGCRSKVDKSKLKQGTRVALDMTTLTIMRMLPREVDPLVYNMSLEDPGQVSFAGIGGLND 142
Query: 219 QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSG 278
QI+E++EVIELP+K+PELF +GI PKGVLLYGPPGTGKTLLARAVA E F++V
Sbjct: 143 QIRELREVIELPLKNPELFQRVGIKPPKGVLLYGPPGTGKTLLARAVASSLETNFLKVVS 202
Query: 279 SELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIF 338
S +V K+IGE +R++RE+F A +EH P IIF
Sbjct: 203 SAIVDKYIGESARLIREMFGYA-----------------------------KEHEPCIIF 233
Query: 339 MDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
MDEID+IG R G+ D E+QRT++ELLNQLDGF+
Sbjct: 234 MDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFD 270
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 34/46 (73%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA E F++V S +V K+IGE +R++RE+F A+
Sbjct: 180 TGKTLLARAVASSLETNFLKVVSSAIVDKYIGESARLIREMFGYAK 225
>gi|150402844|ref|YP_001330138.1| proteasome-activating nucleotidase [Methanococcus maripaludis C7]
gi|166199292|sp|A6VHR1.1|PAN_METM7 RecName: Full=Proteasome-activating nucleotidase; Short=PAN;
AltName: Full=Proteasomal ATPase; AltName:
Full=Proteasome regulatory ATPase; AltName:
Full=Proteasome regulatory particle
gi|150033874|gb|ABR65987.1| 26S proteasome subunit P45 family [Methanococcus maripaludis C7]
Length = 407
Score = 224 bits (570), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 116/287 (40%), Positives = 185/287 (64%), Gaps = 36/287 (12%)
Query: 97 VAEKEQNLRRLQAQRNEL---NAKVR----MLREELQLLQEQGSYVGEVVKPMDKKKVLV 149
+AE E + RL+ + ++ N +++ +L+ EL L+ +G ++ ++++K +V
Sbjct: 27 IAELESKVLRLELKNKDVTRENVQIKKENEILKRELDKLRIPPLILGTILDKVNERKAVV 86
Query: 150 KVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDST 209
K F+V++ + +D D+ P RV L ++ + ++LP + D M +E+ PD +
Sbjct: 87 KSSTGPNFLVNLSQFVDPEDIVPGARVCLNQQTLAIVEVLPKEKDYRAMAMEIEEKPDIS 146
Query: 210 YEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 269
+E +GGL+NQI++IKEV+ELP+K+PELF+ +GI PKGVLLYGPPGTGKTLLA+AVA+ T
Sbjct: 147 FEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPKGVLLYGPPGTGKTLLAKAVAYET 206
Query: 270 ECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNF 329
+F+RV GSELV+KFIGEG+++VR++F +A
Sbjct: 207 NASFVRVVGSELVKKFIGEGAKLVRDVFKLA----------------------------- 237
Query: 330 REHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
+E +P IIF+DEID++ S R ES +GGD EVQRT+++LL ++DGF++
Sbjct: 238 KEKSPCIIFIDEIDAVASKRTESLTGGDREVQRTLMQLLAEMDGFDS 284
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTLLA+AVA+ T +F+RV GSELV+KFIGEG+++VR++F +A+ K
Sbjct: 193 TGKTLLAKAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEK 240
>gi|333986657|ref|YP_004519264.1| proteasome-activating nucleotidase [Methanobacterium sp. SWAN-1]
gi|333824801|gb|AEG17463.1| Proteasome-activating nucleotidase [Methanobacterium sp. SWAN-1]
Length = 403
Score = 224 bits (570), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 113/270 (41%), Positives = 173/270 (64%), Gaps = 29/270 (10%)
Query: 107 LQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNID 166
++ ++ L+ + + LR E++ + + V + +D +V+VK FV+ + ++
Sbjct: 40 IENEKMRLDREAKTLRGEIERFRSPPLVIATVTEVLDDGRVVVKSSTGPNFVIGYSRFLN 99
Query: 167 INDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEV 226
++ P RVAL +++++ ILP++ DPLV M VE+ PD +Y+ +GGL++Q+ EIKE
Sbjct: 100 KKELEPGVRVALNQQTFSIVHILPSEKDPLVMGMEVEEKPDVSYKQIGGLEDQVVEIKET 159
Query: 227 IELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFI 286
+ELP+K PELF +GI PKGVLLYGPPGTGKTLLA+AVAH T TFI++ +E V+K+I
Sbjct: 160 VELPLKKPELFTNIGIEPPKGVLLYGPPGTGKTLLAKAVAHETNATFIKIVAAEFVRKYI 219
Query: 287 GEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIG 346
GEG+R+VR +F +A +E APSIIF+DEID+I
Sbjct: 220 GEGARLVRGVFELA-----------------------------KEKAPSIIFIDEIDAIA 250
Query: 347 SSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
+ R++S + GD EVQRT+++LL ++DGFEA
Sbjct: 251 AKRLKSSTSGDREVQRTLMQLLAEMDGFEA 280
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 40/51 (78%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
+GKTLLA+AVAH T TFI++ +E V+K+IGEG+R+VR +F +A+ K S
Sbjct: 189 TGKTLLAKAVAHETNATFIKIVAAEFVRKYIGEGARLVRGVFELAKEKAPS 239
>gi|290988944|ref|XP_002677130.1| predicted protein [Naegleria gruberi]
gi|284090736|gb|EFC44386.1| predicted protein [Naegleria gruberi]
Length = 452
Score = 224 bits (570), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 118/263 (44%), Positives = 167/263 (63%), Gaps = 32/263 (12%)
Query: 117 KVRMLREELQLLQE-QGS--YVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPN 173
K + + EE ++ E +GS VG + + +D +V +F V I +D + + P
Sbjct: 100 KSKDMEEERNMVDELRGSPMAVGTLEEIIDDNHAIVSSSVGPEFYVSILSIVDKDQLEPG 159
Query: 174 CRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKH 233
C + + N + IL ++ DP+VS+M V+K P +Y +GGL++QI+EIKE +E P+ H
Sbjct: 160 CSILMHNRYLAVVGILQDEADPMVSVMKVDKAPLESYSQIGGLEDQIQEIKEAVEFPLTH 219
Query: 234 PELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMV 293
PEL++ +GI PKGV+LYG PGTGKTLLA+AVAHHT TF+RV GSEL+QK++GEG ++V
Sbjct: 220 PELYEDIGIKPPKGVILYGEPGTGKTLLAKAVAHHTSATFLRVVGSELIQKYLGEGPKLV 279
Query: 294 RELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESG 353
RELF +A E APSI+F+DEID+IG+ R +S
Sbjct: 280 RELFRVAE-----------------------------ELAPSIVFIDEIDAIGTKRFDST 310
Query: 354 SGGDSEVQRTMLELLNQLDGFEA 376
SGG+ E+QRTMLELLNQLDGF++
Sbjct: 311 SGGEREIQRTMLELLNQLDGFDS 333
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 40/45 (88%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVAHHT TF+RV GSEL+QK++GEG ++VRELF +A
Sbjct: 242 TGKTLLAKAVAHHTSATFLRVVGSELIQKYLGEGPKLVRELFRVA 286
>gi|254574136|ref|XP_002494177.1| One of six ATPases of the 19S regulatory particle of the 26S
proteasome [Komagataella pastoris GS115]
gi|238033976|emb|CAY71998.1| One of six ATPases of the 19S regulatory particle of the 26S
proteasome [Komagataella pastoris GS115]
gi|328354003|emb|CCA40400.1| 26S protease regulatory subunit 7 [Komagataella pastoris CBS 7435]
Length = 441
Score = 224 bits (570), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 116/240 (48%), Positives = 151/240 (62%), Gaps = 29/240 (12%)
Query: 136 GEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDP 195
GE +P +K K ++ + KFVV + + + D+ RV + Y + LP ++DP
Sbjct: 108 GEGSEPTEKSKYVINIKQIAKFVVGLGERVSPTDIEEGMRVGVDRTKYEIQLPLPPRIDP 167
Query: 196 LVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPG 255
V++M VE+ PD TY VGG QI +++EV+ELP+ PE F LGI PKG+LLYGPPG
Sbjct: 168 TVTMMTVEEKPDVTYSDVGGCKEQIDKLREVVELPLLSPERFVKLGIDPPKGILLYGPPG 227
Query: 256 TGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFW 315
TGKTL ARAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 228 TGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKK----------- 276
Query: 316 SLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C IIF DE+D+IG +R + G+GGD+EVQRTMLEL+ QLDGF+
Sbjct: 277 ----------AC--------IIFFDEVDAIGGARFDDGAGGDNEVQRTMLELITQLDGFD 318
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 228 TGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTK 275
>gi|389583281|dbj|GAB66016.1| 26S proteasome regulatory subunit 4 [Plasmodium cynomolgi strain B]
Length = 447
Score = 224 bits (570), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 112/230 (48%), Positives = 158/230 (68%), Gaps = 31/230 (13%)
Query: 147 VLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVP 206
+ V PE + V+I +D + + P C V L N++ ++ IL ++VDPLVS+M VEK P
Sbjct: 130 IATSVGPE--YYVNILSFVDKDLLEPGCSVLLNNKTNSVVGILLDEVDPLVSVMKVEKAP 187
Query: 207 DSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVA 266
+Y +GGL++QI+EIKE +ELP+ HPEL++ +GI PKGV+LYGPPGTGKTLLA+AVA
Sbjct: 188 LESYADIGGLESQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGPPGTGKTLLAKAVA 247
Query: 267 HHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIV 326
+ T TF+RV GSEL+QK++G+G ++VRE+F +A
Sbjct: 248 NETSATFLRVVGSELIQKYLGDGPKLVREMFKVA-------------------------- 281
Query: 327 CNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
+HAPSI+F+DEID++G+ R E+ SGG+ E+QRTMLELLNQLDGF++
Sbjct: 282 ---EDHAPSIVFIDEIDAVGTKRYEATSGGEREIQRTMLELLNQLDGFDS 328
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRE+F +A
Sbjct: 237 TGKTLLAKAVANETSATFLRVVGSELIQKYLGDGPKLVREMFKVA 281
>gi|224137776|ref|XP_002326437.1| predicted protein [Populus trichocarpa]
gi|222833759|gb|EEE72236.1| predicted protein [Populus trichocarpa]
Length = 428
Score = 224 bits (570), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 133/312 (42%), Positives = 181/312 (58%), Gaps = 37/312 (11%)
Query: 73 DEAIKSSEGFKPYY--VTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRM-LREELQLLQ 129
D A+ + G PY + K E+ +A+K +L ++ L A + L + Q++Q
Sbjct: 24 DIALLKTYGLGPYSASIKKAEKEIKEMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQ 83
Query: 130 E----QGSYVGEVVKP-MDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYT 184
E Q + +++ P + K ++ V KFVV + + D+ RV + Y
Sbjct: 84 EEQPLQVARCTKIISPNTEDAKYMINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQ 143
Query: 185 LHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQ 244
+ LP K+DP V++M VE+ PD TY VGG QI++++EV+ELP+ HPE F LGI
Sbjct: 144 IQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDP 203
Query: 245 PKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKK 304
PKGVL YGPPGTGKTLLARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 204 PKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKK 263
Query: 305 LAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTM 364
I+F DEID+IG +R + G GGD+EVQRTM
Sbjct: 264 AC-----------------------------IVFFDEIDAIGGARFDDGVGGDNEVQRTM 294
Query: 365 LELLNQLDGFEA 376
LE++NQLDGF+A
Sbjct: 295 LEIVNQLDGFDA 306
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTLLARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 215 TGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSK 262
>gi|209736078|gb|ACI68908.1| 26S protease regulatory subunit 4 [Salmo salar]
Length = 440
Score = 224 bits (570), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 120/276 (43%), Positives = 168/276 (60%), Gaps = 29/276 (10%)
Query: 101 EQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVD 160
E+ R Q Q L K R ++ L+ VG + + +D +V + V
Sbjct: 75 EEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGNLEEIIDDNHAIVSTSVGSEHYVS 134
Query: 161 IDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQI 220
I +D + + P C V L ++ + + +L + DPLV++M VEK P TY +GGLDNQI
Sbjct: 135 ILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQI 194
Query: 221 KEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSE 280
+EIKE +ELP+ HPE ++ +GI PKGV+LYG PGTGKTLLA+AVA+ T TF+RV GSE
Sbjct: 195 QEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSE 254
Query: 281 LVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMD 340
L+QK++G+G ++VRELF +A EHAPSI+F+D
Sbjct: 255 LIQKYLGDGPKLVRELFRVAE-----------------------------EHAPSIVFID 285
Query: 341 EIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
EID+IG+ R +S SGG+ E+QRT+LELLNQLDGF++
Sbjct: 286 EIDAIGTKRYDSNSGGEREIQRTLLELLNQLDGFDS 321
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 230 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 274
>gi|389851712|ref|YP_006353946.1| Proteasome regulatory ATPase [Pyrococcus sp. ST04]
gi|388249018|gb|AFK21871.1| putative Proteasome regulatory ATPase [Pyrococcus sp. ST04]
Length = 396
Score = 224 bits (570), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 120/294 (40%), Positives = 179/294 (60%), Gaps = 29/294 (9%)
Query: 82 FKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKP 141
F+ Y I L+ + E +R L+A + L ++ LR E+ L++ ++ G V++
Sbjct: 8 FQGNYDDYITYLKRRIRNLELQVRMLEADKERLERELSRLRSEMSRLRQPPAFAGTVIEV 67
Query: 142 MDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMM 201
+D + +V+ + +FVV I ID + + P RVAL + + +ILP DP V
Sbjct: 68 LDDDRAIVQNYNGPRFVVRIAPWIDKSKLRPGTRVALDQRTMAVVEILPTSKDPTVLGFE 127
Query: 202 VEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLL 261
V + P+ TY +GGL Q++E++E IELP+KHPELF+ +GI PKGVLLYGPPG GKTL+
Sbjct: 128 VIERPNVTYNDIGGLKKQLQELREAIELPLKHPELFEEVGIDPPKGVLLYGPPGCGKTLM 187
Query: 262 ARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTIL 321
A+A+AH TFIRV GSELV+K+IGEG+R+V ELF +A
Sbjct: 188 AKALAHEVNATFIRVVGSELVRKYIGEGARLVHELFELA--------------------- 226
Query: 322 TNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
+E AP+IIF+DEID+IG+ R++ +GG+ EV RT+++LL ++DGF+
Sbjct: 227 --------KEKAPTIIFIDEIDAIGAKRMDETTGGEREVNRTLMQLLAEMDGFD 272
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 40/50 (80%)
Query: 13 GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
GKTL+A+A+AH TFIRV GSELV+K+IGEG+R+V ELF +A+ K +
Sbjct: 183 GKTLMAKALAHEVNATFIRVVGSELVRKYIGEGARLVHELFELAKEKAPT 232
>gi|452821838|gb|EME28864.1| AAA-type ATPase [Galdieria sulphuraria]
Length = 406
Score = 224 bits (570), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 117/289 (40%), Positives = 174/289 (60%), Gaps = 32/289 (11%)
Query: 90 IEELQLIVAEK---EQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKK 146
++E Q ++++ E +RRL+ + L + ++L+ LQ G +GEV++ +D++K
Sbjct: 21 LKEYQRVLSQHRDIEHRVRRLREEVKGLKQQFDKTEDDLKALQSVGQIIGEVLRAIDQEK 80
Query: 147 VLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVP 206
+VK ++VV ID + + RV+L + T+ +ILP +VDPLV M+ E
Sbjct: 81 YIVKASSGPRYVVGCRNKIDRDKLIQGARVSLDMTTLTIMRILPREVDPLVYNMLTEDPG 140
Query: 207 DSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVA 266
Y VGGL Q++E++EV+ELP+ +PELF +GI PKGVLLYGPPGTGKTLLARA+A
Sbjct: 141 HVPYSDVGGLSEQLRELREVVELPLTNPELFQRVGIKTPKGVLLYGPPGTGKTLLARAIA 200
Query: 267 HHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIV 326
+ +C+F++V S +V K+IGE +R++RE+F A
Sbjct: 201 SNMDCSFLKVVASAIVDKYIGESARIIREMFQYA-------------------------- 234
Query: 327 CNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
+ H P IIFMDEID+IG R G+ D E+QRT++ELLNQLDGF+
Sbjct: 235 ---KAHEPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFD 280
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 37/47 (78%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARC 58
+GKTLLARA+A + +C+F++V S +V K+IGE +R++RE+F A+
Sbjct: 190 TGKTLLARAIASNMDCSFLKVVASAIVDKYIGESARIIREMFQYAKA 236
>gi|156096715|ref|XP_001614391.1| 26S proteasome regulatory subunit 4 [Plasmodium vivax Sal-1]
gi|148803265|gb|EDL44664.1| 26S proteasome regulatory subunit 4, putative [Plasmodium vivax]
Length = 447
Score = 224 bits (570), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 112/230 (48%), Positives = 158/230 (68%), Gaps = 31/230 (13%)
Query: 147 VLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVP 206
+ V PE + V+I +D + + P C V L N++ ++ IL ++VDPLVS+M VEK P
Sbjct: 130 IATSVGPE--YYVNILSFVDKDLLEPGCSVLLNNKTNSVVGILLDEVDPLVSVMKVEKAP 187
Query: 207 DSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVA 266
+Y +GGL++QI+EIKE +ELP+ HPEL++ +GI PKGV+LYGPPGTGKTLLA+AVA
Sbjct: 188 LESYADIGGLESQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGPPGTGKTLLAKAVA 247
Query: 267 HHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIV 326
+ T TF+RV GSEL+QK++G+G ++VRE+F +A
Sbjct: 248 NETSATFLRVVGSELIQKYLGDGPKLVREMFKVA-------------------------- 281
Query: 327 CNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
+HAPSI+F+DEID++G+ R E+ SGG+ E+QRTMLELLNQLDGF++
Sbjct: 282 ---EDHAPSIVFIDEIDAVGTKRYEATSGGEREIQRTMLELLNQLDGFDS 328
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRE+F +A
Sbjct: 237 TGKTLLAKAVANETSATFLRVVGSELIQKYLGDGPKLVREMFKVA 281
>gi|403224252|dbj|BAM42382.1| 26S proteasome ATPase subunit [Theileria orientalis strain
Shintoku]
Length = 487
Score = 224 bits (570), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 127/295 (43%), Positives = 172/295 (58%), Gaps = 39/295 (13%)
Query: 86 YVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKK 145
YV K+ E + E E L++L+ + NELN K E+L+ LQ G VG V++ +D
Sbjct: 106 YVRKVREHR----ELESKLKKLRTEMNELNQKDNKTEEDLKALQSIGQIVGHVLRQIDDN 161
Query: 146 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLV-----SLM 200
K +VK ++VV NID + RVAL + T+ K LP +VDP+V L
Sbjct: 162 KFIVKASSGPRYVVCCKVNIDPKTLVSGVRVALDMTTLTIMKKLPREVDPVVFNMLNDLT 221
Query: 201 MVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTL 260
V K D TY +GGL QI+E++EVIELP+K+P LF +GI PKGVLLYGPPGTGKTL
Sbjct: 222 AVGKNKD-TYSSIGGLSRQIREMREVIELPLKNPFLFKRVGIKAPKGVLLYGPPGTGKTL 280
Query: 261 LARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTI 320
LARA+A+ EC F++V S +V K+IGE ++++RE+F A
Sbjct: 281 LARALANDIECNFLKVVASAVVDKYIGESAKIIREMFGYA-------------------- 320
Query: 321 LTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
+EH P IIFMDE+D+IG R G+ D E+QRT++ELL LDGF+
Sbjct: 321 ---------KEHQPCIIFMDEVDAIGGRRFSQGTSADREIQRTLMELLTHLDGFD 366
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 36/46 (78%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARA+A+ EC F++V S +V K+IGE ++++RE+F A+
Sbjct: 276 TGKTLLARALANDIECNFLKVVASAVVDKYIGESAKIIREMFGYAK 321
>gi|242053915|ref|XP_002456103.1| hypothetical protein SORBIDRAFT_03g030500 [Sorghum bicolor]
gi|241928078|gb|EES01223.1| hypothetical protein SORBIDRAFT_03g030500 [Sorghum bicolor]
Length = 426
Score = 224 bits (570), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 132/312 (42%), Positives = 181/312 (58%), Gaps = 37/312 (11%)
Query: 73 DEAIKSSEGFKPYY--VTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRM-LREELQLLQ 129
D A+ + G PY + K+E+ +A+K +L ++ L + L + Q++Q
Sbjct: 22 DIALLKTYGLGPYSTSIKKVEKEIKEMAKKINDLCGIKESDTGLAPPSQWDLVSDKQMMQ 81
Query: 130 E----QGSYVGEVVKP-MDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYT 184
E Q + +++ P D K ++ V KFVV + + D+ RV + Y
Sbjct: 82 EEQPLQVARCTKIISPNTDDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQ 141
Query: 185 LHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQ 244
+ LP K+DP V++M VE+ PD TY VGG QI++++EV+ELP+ HPE F LGI
Sbjct: 142 IQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDP 201
Query: 245 PKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKK 304
PKGVL YGPPGTGKTLLARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 202 PKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKK 261
Query: 305 LAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTM 364
I+F DE+D+IG +R + G GGD+EVQRTM
Sbjct: 262 AC-----------------------------IVFFDEVDAIGGARFDDGVGGDNEVQRTM 292
Query: 365 LELLNQLDGFEA 376
LE++NQLDGF+A
Sbjct: 293 LEIVNQLDGFDA 304
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTLLARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 213 TGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSK 260
>gi|147919399|ref|YP_686862.1| proteasome-activating nucleotidase [Methanocella arvoryzae MRE50]
gi|121685313|sp|Q0W257.1|PAN_UNCMA RecName: Full=Proteasome-activating nucleotidase; Short=PAN;
AltName: Full=Proteasomal ATPase; AltName:
Full=Proteasome regulatory ATPase; AltName:
Full=Proteasome regulatory particle
gi|110622258|emb|CAJ37536.1| 26s proteasome, regulatory subunit (proteasome-activating
nucleotidase) [Methanocella arvoryzae MRE50]
Length = 417
Score = 224 bits (570), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 124/301 (41%), Positives = 182/301 (60%), Gaps = 36/301 (11%)
Query: 82 FKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAK-------VRMLREELQLLQEQGSY 134
F Y + ++++L+ ++ R+++ ++ + K +R L EL L+
Sbjct: 23 FSKYLLDRVKQLEERNVRLKEEYRKIELEKKSVENKKVQYEREIRKLTSELDRLKTPPLI 82
Query: 135 VGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVD 194
VG ++ M K+++K KFVV+ + I+ +V P +VAL +S + ++LP D
Sbjct: 83 VGTILDVMANGKMIIKSSTGPKFVVNSSQFINSKEVYPGAKVALNQQSLAVIEVLPTVKD 142
Query: 195 PLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPP 254
P V M V P+ Y+ +GGL+ QI E+KE +ELP+ PELF +GI PKGVLLYGPP
Sbjct: 143 PSVLGMEVVDSPEIDYQSIGGLEAQINELKETVELPLLKPELFQKVGIEPPKGVLLYGPP 202
Query: 255 GTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLF 314
GTGKTLLA+AVA+ T+ TFIR+ GSELVQK+IGEG+RMVRELF +A
Sbjct: 203 GTGKTLLAKAVANRTKATFIRIIGSELVQKYIGEGARMVRELFELA-------------- 248
Query: 315 WSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGF 374
+E +PSIIF+DEIDSIG+ R++S + GD EVQRT+++LL ++DGF
Sbjct: 249 ---------------KEKSPSIIFIDEIDSIGAKRLDSITSGDREVQRTLVQLLAEMDGF 293
Query: 375 E 375
+
Sbjct: 294 D 294
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/51 (68%), Positives = 44/51 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
+GKTLLA+AVA+ T+ TFIR+ GSELVQK+IGEG+RMVRELF +A+ K S
Sbjct: 204 TGKTLLAKAVANRTKATFIRIIGSELVQKYIGEGARMVRELFELAKEKSPS 254
>gi|392594618|gb|EIW83942.1| 26S proteasome subunit P45 [Coniophora puteana RWD-64-598 SS2]
Length = 449
Score = 224 bits (570), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 124/289 (42%), Positives = 178/289 (61%), Gaps = 34/289 (11%)
Query: 89 KIEELQLIVAEKEQNLRRL--QAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKK 146
+I++ L+ E QN RL ++ R E N + R + L+ VG + + +D
Sbjct: 73 RIKDYLLLEEEFIQNQERLKPESSREEKNEEDRT---RVDGLRGSPMVVGTLEEIVDDDH 129
Query: 147 VLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVP 206
++ + V I +D + + P C V L ++SY + +L + DPLVS+M ++K P
Sbjct: 130 AIISTATGPESYVAIMSFVDKDRLEPGCSVLLHHKSYAVIGVLEDDADPLVSVMKLDKAP 189
Query: 207 DSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVA 266
+Y VGGL+NQI+EIKE +ELP+ HPEL++ +GI PKGV+LYG PGTGKTLLA+AVA
Sbjct: 190 SESYADVGGLENQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGVPGTGKTLLAKAVA 249
Query: 267 HHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIV 326
+ T TF+RV GSEL+QK++G+G ++VRE+F +A
Sbjct: 250 NQTSATFLRVVGSELIQKYLGDGPKLVREMFRVAE------------------------- 284
Query: 327 CNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
EHAPSI+F+DEID+IG+ R +S SGG+ E+QRTMLELLNQLDGF+
Sbjct: 285 ----EHAPSIVFIDEIDAIGTKRYDSTSGGEREIQRTMLELLNQLDGFD 329
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRE+F +A
Sbjct: 239 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVREMFRVA 283
>gi|125596332|gb|EAZ36112.1| hypothetical protein OsJ_20424 [Oryza sativa Japonica Group]
Length = 417
Score = 224 bits (570), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 132/312 (42%), Positives = 181/312 (58%), Gaps = 37/312 (11%)
Query: 73 DEAIKSSEGFKPYY--VTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRM-LREELQLLQ 129
D A+ + G PY + K+E+ +A+K +L ++ L + L + Q++Q
Sbjct: 13 DIALLKTYGLGPYSTSIKKVEKEIKEMAKKINDLCGIKESDTGLAPPSQWDLVSDKQMMQ 72
Query: 130 E----QGSYVGEVVKP-MDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYT 184
E Q + +++ P D K ++ V KFVV + + D+ RV + Y
Sbjct: 73 EEQPLQVARCTKIISPNTDDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQ 132
Query: 185 LHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQ 244
+ LP K+DP V++M VE+ PD TY VGG QI++++EV+ELP+ HPE F LGI
Sbjct: 133 IQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDP 192
Query: 245 PKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKK 304
PKGVL YGPPGTGKTLLARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 193 PKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKK 252
Query: 305 LAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTM 364
I+F DE+D+IG +R + G GGD+EVQRTM
Sbjct: 253 AC-----------------------------IVFFDEVDAIGGARFDDGVGGDNEVQRTM 283
Query: 365 LELLNQLDGFEA 376
LE++NQLDGF+A
Sbjct: 284 LEIVNQLDGFDA 295
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTLLARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 204 TGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSK 251
>gi|449515756|ref|XP_004164914.1| PREDICTED: 26S protease regulatory subunit S10B homolog B-like
[Cucumis sativus]
Length = 398
Score = 224 bits (570), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 118/288 (40%), Positives = 171/288 (59%), Gaps = 43/288 (14%)
Query: 102 QNLRRLQAQRNELNAKVRMLRE--------------ELQLLQEQGSYVGEVVKPMDKKKV 147
+ R+ Q EL+A+VR LRE +L+ LQ G +GEV++P+D +++
Sbjct: 15 NDYRKKLLQHKELDARVRSLRENLRGAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERL 74
Query: 148 LVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPD 207
+VK ++VV +D + +T RV L + T+ + LP +VDP+V M+ E +
Sbjct: 75 IVKASSGPRYVVGCRNKVDKDKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGN 134
Query: 208 STYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAH 267
+Y VGGL +QI+E++E IELP+ +PELF +GI PKGVLLYGPPGTGKTLLARA+A
Sbjct: 135 VSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIAS 194
Query: 268 HTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVC 327
+ + F++V S ++ K+IGE +R++RE+F A
Sbjct: 195 NIDANFLKVVSSAIIDKYIGESARLIREMFGYA--------------------------- 227
Query: 328 NFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
R+H P IIFMDEID+IG R G+ D E+QRT++ELLNQLDGF+
Sbjct: 228 --RDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFD 273
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 35/46 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARA+A + + F++V S ++ K+IGE +R++RE+F AR
Sbjct: 183 TGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYAR 228
>gi|312065779|ref|XP_003135955.1| RPT-2 protein [Loa loa]
gi|307768874|gb|EFO28108.1| 26S protease regulatory subunit 4 [Loa loa]
Length = 443
Score = 224 bits (570), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 112/242 (46%), Positives = 158/242 (65%), Gaps = 29/242 (11%)
Query: 135 VGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVD 194
VG + + +D + +V + + V+I +D + P C V L ++++ + +L + D
Sbjct: 112 VGNLEEIIDDQHAIVSTNVGSEHYVNILSFVDKEQLEPGCAVLLNHKTHAVIGVLADDTD 171
Query: 195 PLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPP 254
P+VS+M +EK P TY VGGLD QI+EIKE +ELP+ HPE ++ +GI PKGV+LYG P
Sbjct: 172 PMVSVMKLEKAPQETYADVGGLDQQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGCP 231
Query: 255 GTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLF 314
GTGKTLLA+AVA+ T TF+RV GSEL+QK++G+G +MVRELF +A
Sbjct: 232 GTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKMVRELFRVAE------------- 278
Query: 315 WSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGF 374
EHAPSI+F+DEID++G+ R +S SGG+ E+QRTMLELLNQLDGF
Sbjct: 279 ----------------EHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGF 322
Query: 375 EA 376
++
Sbjct: 323 DS 324
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G +MVRELF +A
Sbjct: 233 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKMVRELFRVA 277
>gi|115466876|ref|NP_001057037.1| Os06g0192600 [Oryza sativa Japonica Group]
gi|226497700|ref|NP_001141915.1| uncharacterized protein LOC100274064 [Zea mays]
gi|226499298|ref|NP_001140694.1| uncharacterized protein LOC100272769 [Zea mays]
gi|242066762|ref|XP_002454670.1| hypothetical protein SORBIDRAFT_04g035230 [Sorghum bicolor]
gi|28558165|sp|Q9FXT9.1|PRS7_ORYSJ RecName: Full=26S protease regulatory subunit 7; AltName: Full=26S
proteasome AAA-ATPase subunit RPT1; AltName: Full=26S
proteasome subunit 7; AltName: Full=Regulatory particle
triple-A ATPase subunit 1
gi|11094190|dbj|BAB17624.1| 26S proteasome regulatory particle triple-A ATPase subunit1 [Oryza
sativa Japonica Group]
gi|47497255|dbj|BAD19299.1| 26S proteasome regulatory particle triple-A ATPase subunit1 [Oryza
sativa Japonica Group]
gi|51090788|dbj|BAD35266.1| 26S protease regulatory subunit 7 [Oryza sativa Japonica Group]
gi|51091125|dbj|BAD35822.1| 26S protease regulatory subunit 7 [Oryza sativa Japonica Group]
gi|113595077|dbj|BAF18951.1| Os06g0192600 [Oryza sativa Japonica Group]
gi|125541384|gb|EAY87779.1| hypothetical protein OsI_09197 [Oryza sativa Indica Group]
gi|125554381|gb|EAY99986.1| hypothetical protein OsI_21990 [Oryza sativa Indica Group]
gi|125583923|gb|EAZ24854.1| hypothetical protein OsJ_08636 [Oryza sativa Japonica Group]
gi|194700610|gb|ACF84389.1| unknown [Zea mays]
gi|194706436|gb|ACF87302.1| unknown [Zea mays]
gi|215692740|dbj|BAG88160.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215697824|dbj|BAG92017.1| unnamed protein product [Oryza sativa Japonica Group]
gi|241934501|gb|EES07646.1| hypothetical protein SORBIDRAFT_04g035230 [Sorghum bicolor]
gi|413924303|gb|AFW64235.1| hypothetical protein ZEAMMB73_507184 [Zea mays]
gi|413939237|gb|AFW73788.1| hypothetical protein ZEAMMB73_970549 [Zea mays]
Length = 426
Score = 224 bits (570), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 132/312 (42%), Positives = 181/312 (58%), Gaps = 37/312 (11%)
Query: 73 DEAIKSSEGFKPYY--VTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRM-LREELQLLQ 129
D A+ + G PY + K+E+ +A+K +L ++ L + L + Q++Q
Sbjct: 22 DIALLKTYGLGPYSTSIKKVEKEIKEMAKKINDLCGIKESDTGLAPPSQWDLVSDKQMMQ 81
Query: 130 E----QGSYVGEVVKP-MDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYT 184
E Q + +++ P D K ++ V KFVV + + D+ RV + Y
Sbjct: 82 EEQPLQVARCTKIISPNTDDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQ 141
Query: 185 LHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQ 244
+ LP K+DP V++M VE+ PD TY VGG QI++++EV+ELP+ HPE F LGI
Sbjct: 142 IQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDP 201
Query: 245 PKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKK 304
PKGVL YGPPGTGKTLLARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 202 PKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKK 261
Query: 305 LAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTM 364
I+F DE+D+IG +R + G GGD+EVQRTM
Sbjct: 262 AC-----------------------------IVFFDEVDAIGGARFDDGVGGDNEVQRTM 292
Query: 365 LELLNQLDGFEA 376
LE++NQLDGF+A
Sbjct: 293 LEIVNQLDGFDA 304
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTLLARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 213 TGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSK 260
>gi|340371903|ref|XP_003384484.1| PREDICTED: 26S protease regulatory subunit 4-like [Amphimedon
queenslandica]
Length = 395
Score = 224 bits (570), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 122/288 (42%), Positives = 177/288 (61%), Gaps = 33/288 (11%)
Query: 89 KIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVL 148
+I++ L+ E QN RL+ Q K + R ++ L+ VG + + +D +
Sbjct: 61 RIKDFLLMEQEFIQNQERLKPQEE----KNQEERSKVDDLRGSPMAVGTLEEIIDDNHAI 116
Query: 149 VKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDS 208
V ++ V++ +D + + P C V L N+ + + +L + DP+VS+M +EK P
Sbjct: 117 VSNSVGSEYYVNMLSFVDKDLIEPGCTVLLNNKLHAVVGVLMDDTDPMVSVMKLEKAPSE 176
Query: 209 TYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH 268
+Y +GGLD QI+EIKE +ELP+ HPE ++ +GI PKGV+LYG PGTGKTLLA+AVA+
Sbjct: 177 SYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQ 236
Query: 269 TECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCN 328
T TF+RV GSEL+QK++GEG ++VRELF +A
Sbjct: 237 TSATFLRVCGSELIQKYLGEGPKLVRELFRVAE--------------------------- 269
Query: 329 FREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
EH+PSI+F+DEID+IG+ R ES SGG+ E+QRTMLELLNQLDGF++
Sbjct: 270 --EHSPSIVFIDEIDAIGTKRYESHSGGEREIQRTMLELLNQLDGFDS 315
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++GEG ++VRELF +A
Sbjct: 224 TGKTLLAKAVANQTSATFLRVCGSELIQKYLGEGPKLVRELFRVA 268
>gi|156373877|ref|XP_001629536.1| predicted protein [Nematostella vectensis]
gi|156216539|gb|EDO37473.1| predicted protein [Nematostella vectensis]
Length = 434
Score = 224 bits (570), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 115/230 (50%), Positives = 146/230 (63%), Gaps = 29/230 (12%)
Query: 146 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
K ++ V KFVVD+ + D+ RV + Y +H LP K+DP V++M VE+
Sbjct: 111 KYIINVKQFAKFVVDLGDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEK 170
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
PD TY +GG QI +++EV+E P+ HPE F LGI PKGVLL+GPPGTGKTL ARAV
Sbjct: 171 PDVTYSDIGGCKEQIDKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 230
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTI 325
A+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 231 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKK--------------------- 269
Query: 326 VCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C I+F DEID+IG +R + G+GGD+EVQRTMLEL+NQLDGF+
Sbjct: 270 AC--------IVFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFD 311
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 221 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTK 268
>gi|448398882|ref|ZP_21570237.1| proteasome-activating nucleotidase [Haloterrigena limicola JCM
13563]
gi|445670355|gb|ELZ22957.1| proteasome-activating nucleotidase [Haloterrigena limicola JCM
13563]
Length = 410
Score = 224 bits (570), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 121/298 (40%), Positives = 180/298 (60%), Gaps = 36/298 (12%)
Query: 80 EGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVV 139
E + +Y E+L + + + L + +R L KV + E ++L+ Y+ V
Sbjct: 26 EALRGHY----EDLVDVNEQLSEQLDDAEDRRERLQGKVDRIERENEMLKSSSLYIATVE 81
Query: 140 KPMDKKKVLVKVHPEGKFVV-DIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVS 198
+D ++V+VK H + V+ D+ + ++ V RVA+ N+S+ + IL + D
Sbjct: 82 DVLDDEQVIVKQHGNNQEVLTDVSSRM-VDRVEAGDRVAV-NDSFAIQTILNAETDARAQ 139
Query: 199 LMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGK 258
M + + PD TY +GG+D Q++E++E +E P+ PELFD +GI P GVLLYGPPGTGK
Sbjct: 140 SMEITEKPDVTYADIGGIDEQVREVREAVEQPLSEPELFDEVGIDPPSGVLLYGPPGTGK 199
Query: 259 TLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLL 318
T+LA+AVAH T+ TFI+++GSELV+KFIGEGSR+VR+LF MA
Sbjct: 200 TMLAKAVAHETDATFIKMAGSELVRKFIGEGSRLVRDLFEMA------------------ 241
Query: 319 TILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
RE P+IIF+DEID+I + R ES + GD+EVQRTM++LL+++DGFEA
Sbjct: 242 -----------REREPAIIFIDEIDAIATRRTESKTSGDAEVQRTMMQLLSEMDGFEA 288
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 44/48 (91%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKT+LA+AVAH T+ TFI+++GSELV+KFIGEGSR+VR+LF MAR +
Sbjct: 197 TGKTMLAKAVAHETDATFIKMAGSELVRKFIGEGSRLVRDLFEMARER 244
>gi|148671243|gb|EDL03190.1| proteasome (prosome, macropain) 26S subunit, ATPase 2, isoform
CRA_c [Mus musculus]
Length = 359
Score = 224 bits (570), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 116/230 (50%), Positives = 147/230 (63%), Gaps = 29/230 (12%)
Query: 146 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
K ++ V KFVVD+ + D+ RV + Y +H LP K+DP V++M VE+
Sbjct: 71 KYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEK 130
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
PD TY VGG QI++++EV+E P+ HPE F LGI PKGVLL+GPPGTGKTL ARAV
Sbjct: 131 PDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 190
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTI 325
A+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 191 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKK--------------------- 229
Query: 326 VCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C +IF DEID+IG +R + G+GGD+EVQRTMLEL+NQLDGF+
Sbjct: 230 AC--------LIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFD 271
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 181 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTK 228
>gi|221055153|ref|XP_002258715.1| 26S proteasome regulatory subunit 4 [Plasmodium knowlesi strain H]
gi|193808785|emb|CAQ39487.1| 26S proteasome regulatory subunit 4, putative [Plasmodium knowlesi
strain H]
Length = 447
Score = 224 bits (570), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 112/230 (48%), Positives = 158/230 (68%), Gaps = 31/230 (13%)
Query: 147 VLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVP 206
+ V PE + V+I +D + + P C V L N++ ++ IL ++VDPLVS+M VEK P
Sbjct: 130 IATSVGPE--YYVNILSFVDKDLLEPGCSVLLNNKTNSVVGILLDEVDPLVSVMKVEKAP 187
Query: 207 DSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVA 266
+Y +GGL++QI+EIKE +ELP+ HPEL++ +GI PKGV+LYGPPGTGKTLLA+AVA
Sbjct: 188 LESYADIGGLESQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGPPGTGKTLLAKAVA 247
Query: 267 HHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIV 326
+ T TF+RV GSEL+QK++G+G ++VRE+F +A
Sbjct: 248 NETSATFLRVVGSELIQKYLGDGPKLVREMFKVA-------------------------- 281
Query: 327 CNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
+HAPSI+F+DEID++G+ R E+ SGG+ E+QRTMLELLNQLDGF++
Sbjct: 282 ---EDHAPSIVFIDEIDAVGTKRYEATSGGEREIQRTMLELLNQLDGFDS 328
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRE+F +A
Sbjct: 237 TGKTLLAKAVANETSATFLRVVGSELIQKYLGDGPKLVREMFKVA 281
>gi|159905409|ref|YP_001549071.1| proteasome-activating nucleotidase [Methanococcus maripaludis C6]
gi|226723241|sp|A9A916.1|PAN_METM6 RecName: Full=Proteasome-activating nucleotidase; Short=PAN;
AltName: Full=Proteasomal ATPase; AltName:
Full=Proteasome regulatory ATPase; AltName:
Full=Proteasome regulatory particle
gi|159886902|gb|ABX01839.1| 26S proteasome subunit P45 family [Methanococcus maripaludis C6]
Length = 407
Score = 224 bits (570), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 116/289 (40%), Positives = 184/289 (63%), Gaps = 29/289 (10%)
Query: 88 TKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKV 147
T+I EL+ V E + + + ++ + +L+ EL L+ +G ++ ++++K
Sbjct: 25 TQIAELESKVLRLELKNKDISRENVQIKKENEILKRELDKLRIPPLILGTILDRVNERKA 84
Query: 148 LVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPD 207
+VK F+V++ + +D D+ P RV L ++ + ++LP + D M +E+ PD
Sbjct: 85 VVKSSTGPNFLVNLSQFVDPEDIVPGARVCLNQQTLAIVEVLPKEKDYRAMAMEIEEKPD 144
Query: 208 STYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAH 267
++E +GGL+NQI++IKEV+ELP+K+PELF+ +GI PKGVLLYGPPGTGKTLLA+AVA+
Sbjct: 145 ISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPKGVLLYGPPGTGKTLLAKAVAY 204
Query: 268 HTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVC 327
T +F+RV GSELV+KFIGEG+++VR++F +A
Sbjct: 205 ETNASFVRVVGSELVKKFIGEGAKLVRDVFKLA--------------------------- 237
Query: 328 NFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
+E +P IIF+DEID++ S R ES +GGD EVQRT+++LL ++DGF++
Sbjct: 238 --KEKSPCIIFIDEIDAVASKRTESLTGGDREVQRTLMQLLAEMDGFDS 284
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTLLA+AVA+ T +F+RV GSELV+KFIGEG+++VR++F +A+ K
Sbjct: 193 TGKTLLAKAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEK 240
>gi|324516307|gb|ADY46490.1| 26S protease regulatory subunit 7, partial [Ascaris suum]
Length = 436
Score = 223 bits (569), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 115/230 (50%), Positives = 148/230 (64%), Gaps = 29/230 (12%)
Query: 146 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
+ ++ V KFVVD+ + + D+ RV + Y +H LP K+DP V++M VE+
Sbjct: 113 RYMINVKQFAKFVVDLAETVAPTDIEEGMRVGVDRNKYQIHLPLPAKIDPSVTMMQVEEK 172
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
PD TY VGG +QI++++EV+E P+ HPE F LGI PKGVLLYGPPGTGKTL ARAV
Sbjct: 173 PDVTYADVGGCKDQIEKLREVVETPLLHPERFVNLGIEPPKGVLLYGPPGTGKTLCARAV 232
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTI 325
A+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 233 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKK--------------------- 271
Query: 326 VCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C +IF DEID++G +R + G GGD+EVQRTMLEL+NQLDGF+
Sbjct: 272 AC--------LIFFDEIDAVGGARFDDGMGGDNEVQRTMLELINQLDGFD 313
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 223 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTK 270
>gi|413939236|gb|AFW73787.1| hypothetical protein ZEAMMB73_970549 [Zea mays]
Length = 349
Score = 223 bits (569), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 132/312 (42%), Positives = 181/312 (58%), Gaps = 37/312 (11%)
Query: 73 DEAIKSSEGFKPYY--VTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRM-LREELQLLQ 129
D A+ + G PY + K+E+ +A+K +L ++ L + L + Q++Q
Sbjct: 22 DIALLKTYGLGPYSTSIKKVEKEIKEMAKKINDLCGIKESDTGLAPPSQWDLVSDKQMMQ 81
Query: 130 E----QGSYVGEVVKP-MDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYT 184
E Q + +++ P D K ++ V KFVV + + D+ RV + Y
Sbjct: 82 EEQPLQVARCTKIISPNTDDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQ 141
Query: 185 LHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQ 244
+ LP K+DP V++M VE+ PD TY VGG QI++++EV+ELP+ HPE F LGI
Sbjct: 142 IQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDP 201
Query: 245 PKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKK 304
PKGVL YGPPGTGKTLLARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 202 PKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKK 261
Query: 305 LAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTM 364
I+F DE+D+IG +R + G GGD+EVQRTM
Sbjct: 262 AC-----------------------------IVFFDEVDAIGGARFDDGVGGDNEVQRTM 292
Query: 365 LELLNQLDGFEA 376
LE++NQLDGF+A
Sbjct: 293 LEIVNQLDGFDA 304
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTLLARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 213 TGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSK 260
>gi|242022643|ref|XP_002431748.1| 26S protease regulatory subunit, putative [Pediculus humanus
corporis]
gi|212517073|gb|EEB19010.1| 26S protease regulatory subunit, putative [Pediculus humanus
corporis]
Length = 440
Score = 223 bits (569), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 124/290 (42%), Positives = 179/290 (61%), Gaps = 37/290 (12%)
Query: 89 KIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGS--YVGEVVKPMDKKK 146
+I++ L+ E +N RL+ Q E N + R +EL+ G+ VG + + +D
Sbjct: 67 RIKDYLLMEEEFIRNQERLKPQ-EEKNEEERSKVDELR-----GTPMSVGTLEEIIDDNH 120
Query: 147 VLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVP 206
+V + V I +D + + P C V L ++ + + +L + DPLV++M +EK P
Sbjct: 121 AIVSTAVGSEHYVSIFSIVDKDQLEPGCSVLLNHKVHAVVGVLSDDTDPLVTVMKLEKAP 180
Query: 207 DSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVA 266
TY +GGLD QI+EIKE +ELP+ HPE ++ +GI PKGV+LYGPPGTGKTLLA+AVA
Sbjct: 181 QETYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVA 240
Query: 267 HHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIV 326
+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 241 NQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAE------------------------- 275
Query: 327 CNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
EHAPSI+F+DEID++G+ R +S SGG+ E+QRTMLELLNQLDGF++
Sbjct: 276 ----EHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDS 321
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 230 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 274
>gi|170098953|ref|XP_001880695.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164644220|gb|EDR08470.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 449
Score = 223 bits (569), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 126/291 (43%), Positives = 181/291 (62%), Gaps = 38/291 (13%)
Query: 89 KIEELQLIVAEKEQNLRRL--QAQRNELNAKVRMLREELQLLQEQGS--YVGEVVKPMDK 144
+I++ L+ E QN RL +A R E N + R ++L+ GS VG + + +D
Sbjct: 73 RIKDYLLLEEEFVQNQERLKPEATREEKNEEDRSRVDDLR-----GSPMAVGTMEEIIDD 127
Query: 145 KKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEK 204
++ + V I +D + + P C+V L +++ + +L + DPLVS+M ++K
Sbjct: 128 DHAIISTASGPEHYVSIMSYVDKDLLEPGCQVLLHHKTQAIVGVLQDDADPLVSIMKLDK 187
Query: 205 VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 264
P +Y VGGL+NQI+EIKE +ELP+ HPEL++ +GI PKGV+LYG PGTGKTLLA+A
Sbjct: 188 APTESYADVGGLENQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGVPGTGKTLLAKA 247
Query: 265 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNT 324
VA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 248 VANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAE----------------------- 284
Query: 325 IVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
EHAPSI+F+DEID+IG+ R +S SGG+ E+QRTMLELLNQLDGF+
Sbjct: 285 ------EHAPSIVFIDEIDAIGTKRYDSTSGGEREIQRTMLELLNQLDGFD 329
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 239 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 283
>gi|1066065|gb|AAB34134.1| P26s4 [Drosophila melanogaster]
Length = 439
Score = 223 bits (569), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 117/275 (42%), Positives = 169/275 (61%), Gaps = 33/275 (12%)
Query: 102 QNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDI 161
+N RL+ Q + K R ++ L+ VG + + +D +V + V I
Sbjct: 79 RNQERLKPQ----DEKNEEERSKVDDLRGTPMSVGNLEEIIDDNHAIVSTSVGSEHYVSI 134
Query: 162 DKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIK 221
+D + + P C V L ++ + + +L + DP+V++M +EK P TY +GGLD QI+
Sbjct: 135 LSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTDPMVTMMKLEKAPQETYADIGGLDTQIQ 194
Query: 222 EIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSEL 281
EIKE +ELP+ HPE ++ +GI PKGV+LYGPPGTGKTLLA+AVA+ T TF+RV GSEL
Sbjct: 195 EIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSEL 254
Query: 282 VQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDE 341
+QK++G+G ++VRELF +A EHAPSI+F+DE
Sbjct: 255 IQKYLGDGPKLVRELFRVAE-----------------------------EHAPSIVFIDE 285
Query: 342 IDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
ID++G+ R +S SGG+ E+QRTMLELLNQLDGF++
Sbjct: 286 IDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDS 320
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 229 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 273
>gi|357621953|gb|EHJ73593.1| hypothetical protein KGM_14469 [Danaus plexippus]
Length = 434
Score = 223 bits (569), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 116/230 (50%), Positives = 148/230 (64%), Gaps = 29/230 (12%)
Query: 146 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
K ++ V KFVVD+ ++ D+ RV + Y +H LP K+DP V++M VE+
Sbjct: 111 KYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEK 170
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
PD TY VGG QI++++EV+E P+ HPE F LGI PKGVLL+GPPGTGKTL ARAV
Sbjct: 171 PDVTYSDVGGCKEQIEKLREVVETPLLHPEKFVKLGIEPPKGVLLFGPPGTGKTLCARAV 230
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTI 325
A+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 231 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARSKK--------------------- 269
Query: 326 VCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C +IF DEID+IG +R + G+GGD+EVQRTMLEL+NQLDGF+
Sbjct: 270 AC--------LIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFD 311
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 221 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARSK 268
>gi|336363535|gb|EGN91920.1| hypothetical protein SERLA73DRAFT_80029 [Serpula lacrymans var.
lacrymans S7.3]
gi|336383310|gb|EGO24459.1| hypothetical protein SERLADRAFT_348772 [Serpula lacrymans var.
lacrymans S7.9]
Length = 442
Score = 223 bits (569), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 123/292 (42%), Positives = 182/292 (62%), Gaps = 38/292 (13%)
Query: 89 KIEELQLIVAEKEQNLRRLQAQ--RNELNAKVRMLREELQLLQEQGS--YVGEVVKPMDK 144
+I++ L+ E QN R++ + R E N + R ++L+ GS VG + + +D
Sbjct: 66 RIKDYLLMEEEFVQNQERMKPETTREEKNEEDRTKVDDLR-----GSPMAVGTLEEIIDD 120
Query: 145 KKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEK 204
+V ++ V I +D + + P C+V L +++ + +L + DP+VS+M ++K
Sbjct: 121 DHAIVSTASGPEYYVSIMSFVDKDRIEPGCQVLLHHKTQAVVGVLQDDADPMVSVMKLDK 180
Query: 205 VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 264
P +Y +GGL+NQI+EIKE +ELP+ HPEL++ +GI PKGV+LYG PGTGKTLLA+A
Sbjct: 181 APTESYADIGGLENQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGVPGTGKTLLAKA 240
Query: 265 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNT 324
VA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 241 VANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAE----------------------- 277
Query: 325 IVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
EHAPSI+F+DEID+IG+ R +S SGG+ E+QRTMLELLNQLDGF+
Sbjct: 278 ------EHAPSIVFIDEIDAIGTKRYDSTSGGEREIQRTMLELLNQLDGFDT 323
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 232 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 276
>gi|302841577|ref|XP_002952333.1| 26S proteasome regulatory complex [Volvox carteri f. nagariensis]
gi|300262269|gb|EFJ46476.1| 26S proteasome regulatory complex [Volvox carteri f. nagariensis]
Length = 426
Score = 223 bits (569), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 125/288 (43%), Positives = 173/288 (60%), Gaps = 33/288 (11%)
Query: 90 IEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKP-MDKKKVL 148
I+ + + KE + R +L + +M +EE L Q + +++ P D+ K +
Sbjct: 49 IKRINDLCGVKESDTGLAPPSRWDLVSDKQMQQEEQPL---QVARCTKIINPGTDEAKYV 105
Query: 149 VKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDS 208
+ V KFVV + + D+ RV + Y + LP K+DP V++M VE+ PD
Sbjct: 106 INVKQIAKFVVGLGDKVAPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDI 165
Query: 209 TYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH 268
TY +GG Q+++++EV+ELP+ HPE F LGI PKGVL+YGPPGTGKTLLARAVA+
Sbjct: 166 TYSDIGGSKEQMEKMREVVELPMLHPEKFVQLGIDPPKGVLMYGPPGTGKTLLARAVANR 225
Query: 269 TECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCN 328
T+ FIRV GSELVQK++GEG+RMVRELF MA KK C
Sbjct: 226 TDACFIRVIGSELVQKYVGEGARMVRELFQMARSKK---------------------AC- 263
Query: 329 FREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
I+F DE+D+IG +R + G+GGD+EVQRTMLE++NQLDGF+A
Sbjct: 264 -------IVFFDEVDAIGGARFDDGAGGDNEVQRTMLEIVNQLDGFDA 304
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTLLARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 213 TGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSK 260
>gi|324515312|gb|ADY46161.1| 26S protease regulatory subunit 4, partial [Ascaris suum]
Length = 458
Score = 223 bits (569), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 112/242 (46%), Positives = 156/242 (64%), Gaps = 29/242 (11%)
Query: 135 VGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVD 194
VG + + +D + +V + + V I +D + P C V L ++++ + +L D
Sbjct: 127 VGSLEEIIDDQHAIVSTNVGSEHYVSILSFVDKEQLEPGCAVLLNHKTHAVIGVLAEDTD 186
Query: 195 PLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPP 254
P+VS+M +EK P TY VGGLD QI+EIKE +ELP+ HPE ++ +GI PKGV+LYG P
Sbjct: 187 PMVSVMKLEKAPQETYADVGGLDQQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGSP 246
Query: 255 GTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLF 314
GTGKTLLA+AVA+ T TF+RV GSEL+QK++G+G +MVRELF +A
Sbjct: 247 GTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKMVRELFRVAE------------- 293
Query: 315 WSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGF 374
EHAPSI+F+DEID++G+ R +S SGG+ E+QRTMLELLNQLDGF
Sbjct: 294 ----------------EHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGF 337
Query: 375 EA 376
++
Sbjct: 338 DS 339
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G +MVRELF +A
Sbjct: 248 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKMVRELFRVA 292
>gi|15239140|ref|NP_199115.1| regulatory particle triple-A ATPase 4A [Arabidopsis thaliana]
gi|75337115|sp|Q9SEI3.1|PS10A_ARATH RecName: Full=26S protease regulatory subunit 10B homolog A;
AltName: Full=26S proteasome AAA-ATPase subunit RPT4a;
AltName: Full=26S proteasome subunit 10B homolog A;
AltName: Full=Regulatory particle triple-A ATPase
subunit 4a
gi|6652884|gb|AAF22524.1|AF123393_1 26S proteasome AAA-ATPase subunit RPT4a [Arabidopsis thaliana]
gi|13937183|gb|AAK50085.1|AF372945_1 AT5g43010/MBD2_21 [Arabidopsis thaliana]
gi|9758590|dbj|BAB09203.1| 26S proteasome AAA-ATPase subunit RPT4a [Arabidopsis thaliana]
gi|18700262|gb|AAL77741.1| AT5g43010/MBD2_21 [Arabidopsis thaliana]
gi|332007517|gb|AED94900.1| regulatory particle triple-A ATPase 4A [Arabidopsis thaliana]
Length = 399
Score = 223 bits (569), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 122/308 (39%), Positives = 180/308 (58%), Gaps = 39/308 (12%)
Query: 71 DVDEAIKSSEGFKPYYVTKI---EELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQL 127
DVDE+++ Y K+ +EL+ V +NLR + + N+ ++L+
Sbjct: 3 DVDESVRRRTAAVSEYRKKLLQHKELESRVRTARENLRGAKKEFNKTE-------DDLKS 55
Query: 128 LQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHK 187
LQ G +GEV++P+D ++++VK ++VV +D +T RV L + T+ +
Sbjct: 56 LQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMR 115
Query: 188 ILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKG 247
LP +VDP+V M+ E + +Y VGGL +QI+E++E IELP+ +PELF +GI PKG
Sbjct: 116 ALPREVDPVVYNMLHEDPGNISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKG 175
Query: 248 VLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAF 307
VLLYGPPGTGKTLLARA+A + + F++V S ++ K+IGE +R++RE+F A
Sbjct: 176 VLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYA------- 228
Query: 308 AHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLEL 367
REH P IIFMDEID+IG R G+ D E+QRT++EL
Sbjct: 229 ----------------------REHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMEL 266
Query: 368 LNQLDGFE 375
LNQLDGF+
Sbjct: 267 LNQLDGFD 274
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 35/46 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARA+A + + F++V S ++ K+IGE +R++RE+F AR
Sbjct: 184 TGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAR 229
>gi|449469945|ref|XP_004152679.1| PREDICTED: 26S protease regulatory subunit S10B homolog B-like
[Cucumis sativus]
Length = 398
Score = 223 bits (569), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 118/288 (40%), Positives = 171/288 (59%), Gaps = 43/288 (14%)
Query: 102 QNLRRLQAQRNELNAKVRMLRE--------------ELQLLQEQGSYVGEVVKPMDKKKV 147
+ R+ Q EL+A+VR LRE +L+ LQ G +GEV++P+D +++
Sbjct: 15 NDYRKKLLQHKELDARVRSLRENLRGAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERL 74
Query: 148 LVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPD 207
+VK ++VV +D + +T RV L + T+ + LP +VDP+V M+ E +
Sbjct: 75 IVKASSGPRYVVGCRNKVDKDKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGN 134
Query: 208 STYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAH 267
+Y VGGL +QI+E++E IELP+ +PELF +GI PKGVLLYGPPGTGKTLLARA+A
Sbjct: 135 ISYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIAS 194
Query: 268 HTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVC 327
+ + F++V S ++ K+IGE +R++RE+F A
Sbjct: 195 NIDANFLKVVSSAIIDKYIGESARLIREMFGYA--------------------------- 227
Query: 328 NFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
R+H P IIFMDEID+IG R G+ D E+QRT++ELLNQLDGF+
Sbjct: 228 --RDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFD 273
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 35/46 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARA+A + + F++V S ++ K+IGE +R++RE+F AR
Sbjct: 183 TGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYAR 228
>gi|405964277|gb|EKC29780.1| 26S protease regulatory subunit 4 [Crassostrea gigas]
Length = 879
Score = 223 bits (569), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 119/288 (41%), Positives = 176/288 (61%), Gaps = 33/288 (11%)
Query: 89 KIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVL 148
+I++ L+ E +N RL+ Q + + R ++ L+ VG + + +D +
Sbjct: 506 RIKDYLLMEEEFIRNQERLKPQEEKHEEE----RTKVDELRGSPMSVGTLEEIIDDNHAI 561
Query: 149 VKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDS 208
V + V I +D + + P C V L ++ + + +L + DP+V++M +EK P
Sbjct: 562 VSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLGDDTDPMVTVMKLEKAPQE 621
Query: 209 TYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH 268
TY +GGLD QI+EIKE +ELP+ HPE ++ +GI PKGV+LYGPPGTGKTLLA+AVA+
Sbjct: 622 TYADIGGLDQQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQ 681
Query: 269 TECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCN 328
T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 682 TSATFLRVVGSELIQKYLGDGPKLVRELFRVA---------------------------- 713
Query: 329 FREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
EHAPSI+F+DEID++G+ R +S SGG+ E+QRTMLELLNQLDGF++
Sbjct: 714 -EEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDS 760
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 669 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 713
>gi|389609441|dbj|BAM18332.1| 26S protease regulatory subunit rpt1 [Papilio xuthus]
Length = 434
Score = 223 bits (569), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 116/230 (50%), Positives = 148/230 (64%), Gaps = 29/230 (12%)
Query: 146 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
K ++ V KFVVD+ ++ D+ RV + Y +H LP K+DP V++M VE+
Sbjct: 111 KYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEK 170
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
PD TY VGG QI++++EV+E P+ HPE F LGI PKGVLL+GPPGTGKTL ARAV
Sbjct: 171 PDVTYSDVGGCKEQIEKLREVVETPLLHPEKFVKLGIEPPKGVLLFGPPGTGKTLCARAV 230
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTI 325
A+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 231 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARSKK--------------------- 269
Query: 326 VCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C +IF DEID+IG +R + G+GGD+EVQRTMLEL+NQLDGF+
Sbjct: 270 AC--------LIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFD 311
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 221 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARSK 268
>gi|402585533|gb|EJW79473.1| 26S protease regulatory subunit 4, partial [Wuchereria bancrofti]
Length = 333
Score = 223 bits (569), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 112/242 (46%), Positives = 158/242 (65%), Gaps = 29/242 (11%)
Query: 135 VGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVD 194
VG + + +D + +V + + V+I +D + P C V L ++++ + +L + D
Sbjct: 120 VGNLEEIIDDQHAIVSTNVGSEHYVNILSFVDKEQLEPGCAVLLNHKTHAVIGVLADDTD 179
Query: 195 PLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPP 254
P+VS+M +EK P TY VGGLD QI+EIKE +ELP+ HPE ++ +GI PKGV+LYG P
Sbjct: 180 PMVSVMKLEKAPQETYADVGGLDQQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGCP 239
Query: 255 GTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLF 314
GTGKTLLA+AVA+ T TF+RV GSEL+QK++G+G +MVRELF +A
Sbjct: 240 GTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKMVRELFRVAE------------- 286
Query: 315 WSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGF 374
EHAPSI+F+DEID++G+ R +S SGG+ E+QRTMLELLNQLDGF
Sbjct: 287 ----------------EHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGF 330
Query: 375 EA 376
++
Sbjct: 331 DS 332
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G +MVRELF +A
Sbjct: 241 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKMVRELFRVA 285
>gi|406607742|emb|CCH40847.1| 26S protease regulatory [Wickerhamomyces ciferrii]
Length = 438
Score = 223 bits (569), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 116/234 (49%), Positives = 149/234 (63%), Gaps = 29/234 (12%)
Query: 143 DKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMV 202
DK K ++ + KFVV + + + D+ RV + Y + LP K+DP V++M V
Sbjct: 112 DKSKYVINIKQIAKFVVALGEKVSPTDIEEAMRVGVDRTKYEIQLPLPPKIDPSVTMMTV 171
Query: 203 EKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 262
E PD TY VGG QI++++EV+ELP+ PE F LGI PKG+LLYGPPGTGKTL A
Sbjct: 172 EDKPDVTYSDVGGCKEQIEKLREVVELPLLSPERFVKLGIDPPKGILLYGPPGTGKTLCA 231
Query: 263 RAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILT 322
RAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 232 RAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKK------------------ 273
Query: 323 NTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
C IIF DEID++G +R++ G+GGD+EVQRTMLEL+ QLDGF+A
Sbjct: 274 ---AC--------IIFFDEIDAVGGARVDDGAGGDNEVQRTMLELITQLDGFDA 316
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 225 TGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTK 272
>gi|339248051|ref|XP_003375659.1| 26S protease regulatory subunit 7 [Trichinella spiralis]
gi|316970971|gb|EFV54822.1| 26S protease regulatory subunit 7 [Trichinella spiralis]
Length = 433
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 122/258 (47%), Positives = 157/258 (60%), Gaps = 34/258 (13%)
Query: 123 EELQLLQEQGSYVGEVVKPM-----DKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVA 177
++L L QEQ V K + D + ++ V KFVVD+ + D+ RV
Sbjct: 82 DKLTLQQEQPLQVARCTKIIAGETEDSNRYIINVKQFAKFVVDLADQVAPTDIEEGMRVG 141
Query: 178 LRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELF 237
+ Y +H LP K+DP V++M VE+ PD TY VGG QI++++EV+E P+ +P+ F
Sbjct: 142 VDRNKYQIHLPLPPKIDPTVTVMQVEEKPDVTYNDVGGCKEQIEKLREVVETPLLYPDKF 201
Query: 238 DALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 297
LGI PKGVLLYGPPGTGKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF
Sbjct: 202 VNLGIEPPKGVLLYGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELF 261
Query: 298 VMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGD 357
MA KK C +IF DEID+IG +R + G GGD
Sbjct: 262 EMARSKK---------------------AC--------LIFFDEIDAIGGARFDDGMGGD 292
Query: 358 SEVQRTMLELLNQLDGFE 375
+EVQRTMLEL+NQLDGF+
Sbjct: 293 NEVQRTMLELINQLDGFD 310
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 220 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARSK 267
>gi|82617273|emb|CAI64178.1| proteasome-activating nucleotidase (proteasome regulatroy subunit)
[uncultured archaeon]
Length = 440
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 126/314 (40%), Positives = 188/314 (59%), Gaps = 37/314 (11%)
Query: 70 MDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQA-------QRNELNAKVRMLR 122
MDVD + S+E F Y V ++++L+L E+ ++++ QR + ++R LR
Sbjct: 36 MDVDADMDSTE-FSKYVVDRMQQLELKNDLLEKQYQKVETEKQLAEDQRLKYERELRKLR 94
Query: 123 EELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNES 182
EL L+ VG +V +++ K +V+ +F+V + I D+ P +VAL E
Sbjct: 95 SELDKLKTTPQLVGTLVSILEEGKSIVRSSTGPEFIVGSSQFIKDGDLKPGVQVALNKEH 154
Query: 183 YTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGI 242
++ ++P DPLV M V + PD Y+ +GGLD QI+ ++ +E + PE+F+ +GI
Sbjct: 155 LSIVAVIPRSEDPLVQAMEVIESPDIDYDQIGGLDKQIEVLRGAVEFALTKPEIFERIGI 214
Query: 243 AQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASL 302
PKGVLL+GPPGTGKTLLA+AVA TE TFIRV GSELVQK+IGEG+RMVR++F MA
Sbjct: 215 DPPKGVLLFGPPGTGKTLLAKAVATRTEATFIRVVGSELVQKYIGEGARMVRDVFEMA-- 272
Query: 303 KKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQR 362
R+ AP+IIF+DE+DSIG+ R++ S G EVQR
Sbjct: 273 ---------------------------RKKAPAIIFIDELDSIGAVRLDDASSGGREVQR 305
Query: 363 TMLELLNQLDGFEA 376
T+++LL+++DGF +
Sbjct: 306 TLMQLLSEMDGFNS 319
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/51 (70%), Positives = 43/51 (84%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
+GKTLLA+AVA TE TFIRV GSELVQK+IGEG+RMVR++F MAR K +
Sbjct: 228 TGKTLLAKAVATRTEATFIRVVGSELVQKYIGEGARMVRDVFEMARKKAPA 278
>gi|320167662|gb|EFW44561.1| 26S protease regulatory subunit [Capsaspora owczarzaki ATCC 30864]
Length = 440
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 120/267 (44%), Positives = 166/267 (62%), Gaps = 32/267 (11%)
Query: 113 ELNAKVRMLREELQLLQEQGSYVGEVVKPMDKK---KVLVKVHPEGKFVVDIDKNIDIND 169
+L A +M++EE L + + + V P K+ + ++ + KFVV + N+ +D
Sbjct: 81 DLAADKQMMQEEQSLQVARCTKIINVANPGPKEAASQYVINIKQLAKFVVGLADNVAPSD 140
Query: 170 VTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIEL 229
+ RV + Y +H LP ++DP V++M VE+ PD TY VGG QI++++EV+E
Sbjct: 141 IEEGMRVGVDRGKYQIHLPLPPRIDPTVTMMQVEEKPDVTYADVGGCKEQIEKLREVVET 200
Query: 230 PVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEG 289
P+ HPE F LGI PKGVLL+GPPGTGKTL ARAVA+ T+ FIRV GSELVQK++GEG
Sbjct: 201 PLLHPERFVNLGIDPPKGVLLFGPPGTGKTLSARAVANRTDACFIRVIGSELVQKYVGEG 260
Query: 290 SRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSR 349
+R+VR+LF MA KK C +IF DEID++G +R
Sbjct: 261 ARLVRDLFDMARSKK---------------------AC--------VIFFDEIDAVGGAR 291
Query: 350 IESGSGGDSEVQRTMLELLNQLDGFEA 376
+ G+GGD+EVQRTMLEL+NQLDGF+A
Sbjct: 292 FDDGAGGDNEVQRTMLELINQLDGFDA 318
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+R+VR+LF MAR K
Sbjct: 227 TGKTLSARAVANRTDACFIRVIGSELVQKYVGEGARLVRDLFDMARSK 274
>gi|194707130|gb|ACF87649.1| unknown [Zea mays]
Length = 356
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 121/259 (46%), Positives = 159/259 (61%), Gaps = 33/259 (12%)
Query: 119 RMLREELQLLQEQGSYVGEVVKP-MDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVA 177
+M++EE L Q + +++ P D K ++ V KFVV + + D+ RV
Sbjct: 8 QMMQEEQPL---QVARCTKIISPNTDDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVG 64
Query: 178 LRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELF 237
+ Y + LP K+DP V++M VE+ PD TY VGG QI++++EV+ELP+ HPE F
Sbjct: 65 VDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKF 124
Query: 238 DALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 297
LGI PKGVL YGPPGTGKTLLARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF
Sbjct: 125 VKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELF 184
Query: 298 VMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGD 357
MA KK I+F DE+D+IG +R + G GGD
Sbjct: 185 QMARSKKAC-----------------------------IVFFDEVDAIGGARFDDGVGGD 215
Query: 358 SEVQRTMLELLNQLDGFEA 376
+EVQRTMLE++NQLDGF+A
Sbjct: 216 NEVQRTMLEIVNQLDGFDA 234
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTLLARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 143 TGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSK 190
>gi|157131453|ref|XP_001655853.1| 26S protease regulatory subunit [Aedes aegypti]
gi|94468994|gb|ABF18346.1| 26S proteasome regulatory chain 4 [Aedes aegypti]
gi|108871524|gb|EAT35749.1| AAEL012095-PA [Aedes aegypti]
Length = 438
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 120/288 (41%), Positives = 176/288 (61%), Gaps = 33/288 (11%)
Query: 89 KIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVL 148
+I++ L+ E +N RL+ Q + K R ++ L+ VG + + +D +
Sbjct: 65 RIKDYLLMEEEFIRNQERLKPQ----DEKNEEERSKVDDLRGTPMSVGNLEEIIDDNHAI 120
Query: 149 VKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDS 208
V + V I +D + + P C V L ++ + + +L + DP+V++M +EK P
Sbjct: 121 VSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLGDDTDPMVTVMKLEKAPQE 180
Query: 209 TYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH 268
TY +GGLD QI+EIKE +ELP+ HPE ++ +GI PKGV+LYGPPGTGKTLLA+AVA+
Sbjct: 181 TYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQ 240
Query: 269 TECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCN 328
T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 241 TSATFLRVVGSELIQKYLGDGPKLVRELFRVAE--------------------------- 273
Query: 329 FREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
EHAPSI+F+DEID++G+ R +S SGG+ E+QRTMLELLNQLDGF++
Sbjct: 274 --EHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDS 319
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 228 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 272
>gi|357124950|ref|XP_003564159.1| PREDICTED: 26S protease regulatory subunit 7-like [Brachypodium
distachyon]
Length = 426
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 122/265 (46%), Positives = 162/265 (61%), Gaps = 33/265 (12%)
Query: 113 ELNAKVRMLREELQLLQEQGSYVGEVVKP-MDKKKVLVKVHPEGKFVVDIDKNIDINDVT 171
+L + +M++EE L Q + +++ P D K ++ V KFVV + + D+
Sbjct: 72 DLVSDKQMMQEEQPL---QVARCTKIISPNTDDAKYVINVKQIAKFVVGLGDKVSPTDIE 128
Query: 172 PNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPV 231
RV + Y + LP K+DP V++M VE+ PD TY VGG QI++++EV+ELP+
Sbjct: 129 EGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPM 188
Query: 232 KHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSR 291
HPE F LGI PKGVL YGPPGTGKTLLARAVA+ T+ FIRV GSELVQK++GEG+R
Sbjct: 189 LHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGAR 248
Query: 292 MVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIE 351
MVRELF MA KK I+F DE+D+IG +R +
Sbjct: 249 MVRELFQMARSKKAC-----------------------------IVFFDEVDAIGGARFD 279
Query: 352 SGSGGDSEVQRTMLELLNQLDGFEA 376
G GGD+EVQRTMLE++NQLDGF+A
Sbjct: 280 DGVGGDNEVQRTMLEIVNQLDGFDA 304
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTLLARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 213 TGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSK 260
>gi|170051679|ref|XP_001861875.1| 26S protease regulatory subunit 4 [Culex quinquefasciatus]
gi|167872831|gb|EDS36214.1| 26S protease regulatory subunit 4 [Culex quinquefasciatus]
Length = 438
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 120/288 (41%), Positives = 176/288 (61%), Gaps = 33/288 (11%)
Query: 89 KIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVL 148
+I++ L+ E +N RL+ Q + K R ++ L+ VG + + +D +
Sbjct: 65 RIKDYLLMEEEFIRNQERLKPQ----DEKNEEERSKVDDLRGTPMSVGNLEEIIDDNHAI 120
Query: 149 VKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDS 208
V + V I +D + + P C V L ++ + + +L + DP+V++M +EK P
Sbjct: 121 VSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLGDDTDPMVTVMKLEKAPQE 180
Query: 209 TYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH 268
TY +GGLD QI+EIKE +ELP+ HPE ++ +GI PKGV+LYGPPGTGKTLLA+AVA+
Sbjct: 181 TYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQ 240
Query: 269 TECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCN 328
T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 241 TSATFLRVVGSELIQKYLGDGPKLVRELFRVAE--------------------------- 273
Query: 329 FREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
EHAPSI+F+DEID++G+ R +S SGG+ E+QRTMLELLNQLDGF++
Sbjct: 274 --EHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDS 319
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 228 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 272
>gi|389611682|dbj|BAM19425.1| proteasome 26S subunit subunit 4 ATPase, partial [Papilio xuthus]
Length = 441
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 121/288 (42%), Positives = 175/288 (60%), Gaps = 33/288 (11%)
Query: 89 KIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVL 148
+I++ L+ E +N RL+ Q K+ R ++ L+ VG + + +D +
Sbjct: 68 RIKDYLLMEEEFIRNQERLKPQEE----KIEEERSKVDDLRGTPMSVGNLEEIIDDNHAI 123
Query: 149 VKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDS 208
V + V I D + + P C V L ++ + + +L + DP+VS+M +EK P
Sbjct: 124 VSTSVGSEHYVSILSFEDKDQLEPGCSVLLNHKVHAVVGVLGDDTDPMVSVMKLEKAPQE 183
Query: 209 TYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH 268
TY +GGLD QI+EIKE +ELP+ HPE ++ +GI PKGV+LYGPPGTGKTLLA+AVA+
Sbjct: 184 TYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQ 243
Query: 269 TECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCN 328
T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 244 TSATFLRVVGSELIQKYLGDGPKLVRELFRVAE--------------------------- 276
Query: 329 FREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
EHAPSI+F+DEID++G+ R +S SGG+ E+QRTMLELLNQLDGF++
Sbjct: 277 --EHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDS 322
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 231 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 275
>gi|52549234|gb|AAU83083.1| ATP-dependent 26S proteasome regulatory subunit [uncultured
archaeon GZfos26E7]
Length = 409
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 126/314 (40%), Positives = 187/314 (59%), Gaps = 37/314 (11%)
Query: 70 MDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQA-------QRNELNAKVRMLR 122
MDVD I S+E F Y V ++++L+L E+ ++++ QR + ++R LR
Sbjct: 5 MDVDADIDSTE-FSKYVVDRMQQLELKNNLLEKQYQKVETEKQLAEDQRLKYERELRKLR 63
Query: 123 EELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNES 182
EL L+ VG +V +++ K +V+ +F+V + I D+ P +VAL E
Sbjct: 64 SELDKLKTTPQLVGTLVNVLEEGKSIVRSSTGPEFIVGSSQFIKDGDLKPGVQVALNKEH 123
Query: 183 YTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGI 242
++ ++P DPLV M V + PD Y +GGLD QI+ ++ +E + PE+F+ +GI
Sbjct: 124 LSIVAVIPGSEDPLVQAMEVIESPDIDYNQIGGLDKQIEVLRGAVEFALTKPEIFERIGI 183
Query: 243 AQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASL 302
PKGVLL+GPPGTGKTLLA+AVA T+ TFIRV GSELVQK+IGEG+RMVR++F MA
Sbjct: 184 DPPKGVLLFGPPGTGKTLLAKAVATRTDATFIRVVGSELVQKYIGEGARMVRDVFEMA-- 241
Query: 303 KKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQR 362
R+ AP+IIF+DE+DSIG+ R++ S G EVQR
Sbjct: 242 ---------------------------RKKAPAIIFIDELDSIGAVRLDDASSGGREVQR 274
Query: 363 TMLELLNQLDGFEA 376
T+++LL+++DGF +
Sbjct: 275 TLMQLLSEMDGFNS 288
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/51 (68%), Positives = 43/51 (84%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
+GKTLLA+AVA T+ TFIRV GSELVQK+IGEG+RMVR++F MAR K +
Sbjct: 197 TGKTLLAKAVATRTDATFIRVVGSELVQKYIGEGARMVRDVFEMARKKAPA 247
>gi|195425397|ref|XP_002060996.1| GK10708 [Drosophila willistoni]
gi|194157081|gb|EDW71982.1| GK10708 [Drosophila willistoni]
Length = 433
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 124/260 (47%), Positives = 159/260 (61%), Gaps = 34/260 (13%)
Query: 121 LREELQLLQ-EQGSYVGEVVKPM----DKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCR 175
L + Q+LQ EQ V K + D K ++ V KFVVD+ + D+ R
Sbjct: 80 LAADKQILQNEQPLQVARCTKIINADSDDPKYIINVKQFAKFVVDLADTVAPTDIEEGMR 139
Query: 176 VALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPE 235
+ + Y +H LP K+DP V++M VE+ PD TY VGG QI++++EV+E P+ HPE
Sbjct: 140 LGVDRTKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPE 199
Query: 236 LFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRE 295
F LGI PKGVLL+GPPGTGKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRE
Sbjct: 200 KFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRE 259
Query: 296 LFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSG 355
LF MA KK C +IF DEID+IG +R + G+G
Sbjct: 260 LFEMARSKK---------------------AC--------LIFFDEIDAIGGARFDDGAG 290
Query: 356 GDSEVQRTMLELLNQLDGFE 375
GD+EVQRTMLEL+NQLDGF+
Sbjct: 291 GDNEVQRTMLELINQLDGFD 310
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 220 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARSK 267
>gi|383850981|ref|XP_003701042.1| PREDICTED: 26S protease regulatory subunit 7-like [Megachile
rotundata]
Length = 434
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 116/230 (50%), Positives = 148/230 (64%), Gaps = 29/230 (12%)
Query: 146 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
K ++ V KFVVD+ ++ D+ RV + Y +H LP K+DP V++M VE+
Sbjct: 111 KYVINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEK 170
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
PD TY VGG QI++++EV+E P+ HPE F LGI PKGVLL+GPPGTGKTL ARAV
Sbjct: 171 PDVTYSDVGGCKEQIEKLREVVETPLLHPEKFVYLGIEPPKGVLLFGPPGTGKTLCARAV 230
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTI 325
A+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 231 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARSKK--------------------- 269
Query: 326 VCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C +IF DEID+IG +R + G+GGD+EVQRTMLEL+NQLDGF+
Sbjct: 270 AC--------LIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFD 311
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 221 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARSK 268
>gi|307199279|gb|EFN79932.1| 26S protease regulatory subunit 4 [Harpegnathos saltator]
Length = 486
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 119/288 (41%), Positives = 176/288 (61%), Gaps = 33/288 (11%)
Query: 89 KIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVL 148
+I++ L+ E +N RL+ Q + + R ++ L+ VG + + +D +
Sbjct: 113 RIKDYLLMEEEFIRNQERLKPQEEKNEEE----RSKVDDLRGTPMSVGTLEEIIDDNHAI 168
Query: 149 VKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDS 208
V + V I +D + + P C V L ++ + + +L + DP+V++M +EK P
Sbjct: 169 VSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLGDDTDPMVTVMKLEKAPQE 228
Query: 209 TYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH 268
TY +GGLD QI+EIKE +ELP+ HPE ++ +GI PKGV+LYGPPGTGKTLLA+AVA+
Sbjct: 229 TYTDIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQ 288
Query: 269 TECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCN 328
T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 289 TSATFLRVVGSELIQKYLGDGPKLVRELFRVAE--------------------------- 321
Query: 329 FREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
EHAPSI+F+DEID++G+ R +S SGG+ E+QRTMLELLNQLDGF++
Sbjct: 322 --EHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDS 367
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 276 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 320
>gi|355714057|gb|AES04878.1| proteasome 26S ATPase subunit 6 [Mustela putorius furo]
Length = 370
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 118/278 (42%), Positives = 165/278 (59%), Gaps = 29/278 (10%)
Query: 99 EKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFV 158
E + L+ L+ Q EL + +L+ LQ G VGEV+K + ++K +VK ++V
Sbjct: 2 EIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYV 61
Query: 159 VDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDN 218
V + +D + + P RVAL + T+ + LP +VDPLV M E + +Y +GGL
Sbjct: 62 VGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSE 121
Query: 219 QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSG 278
QI+E++EVIELP+ +PELF +GI PKG LLYGPPGTGKTLLARAVA +C F++V
Sbjct: 122 QIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVS 181
Query: 279 SELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIF 338
S +V K+IGE +R++RE+F A R+H P IIF
Sbjct: 182 SSIVDKYIGESARLIREMFNYA-----------------------------RDHQPCIIF 212
Query: 339 MDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
MDEID+IG R G+ D E+QRT++ELLNQ+DGF+
Sbjct: 213 MDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDT 250
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 35/46 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA +C F++V S +V K+IGE +R++RE+F AR
Sbjct: 159 TGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYAR 204
>gi|427789601|gb|JAA60252.1| Putative 26s protease regulatory subunit 7 [Rhipicephalus
pulchellus]
Length = 435
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 115/230 (50%), Positives = 149/230 (64%), Gaps = 29/230 (12%)
Query: 146 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
K ++ V KFVVD+ ++ D+ RV + Y +H LP K+DP V++M VE+
Sbjct: 112 KYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEK 171
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
PD TY VGG QI++++EV+E+P+ HPE F LGI PKGVLL+GPPGTGKTL ARAV
Sbjct: 172 PDVTYADVGGCKEQIEKLREVVEMPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 231
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTI 325
A+ T+ FIRV GSELVQK++GEG+RMVRELF +A KK
Sbjct: 232 ANRTDACFIRVIGSELVQKYVGEGARMVRELFELARSKK--------------------- 270
Query: 326 VCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C +IF DEID+IG +R + G+GGD+EVQRTMLEL+NQLDGF+
Sbjct: 271 AC--------LIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFD 312
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF +AR K
Sbjct: 222 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFELARSK 269
>gi|34783985|gb|AAH57997.1| Psmc6 protein, partial [Mus musculus]
Length = 382
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 118/278 (42%), Positives = 165/278 (59%), Gaps = 29/278 (10%)
Query: 99 EKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFV 158
E + L+ L+ Q EL + +L+ LQ G VGEV+K + ++K +VK ++V
Sbjct: 14 EIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYV 73
Query: 159 VDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDN 218
V + +D + + P RVAL + T+ + LP +VDPLV M E + +Y +GGL
Sbjct: 74 VGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSE 133
Query: 219 QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSG 278
QI+E++EVIELP+ +PELF +GI PKG LLYGPPGTGKTLLARAVA +C F++V
Sbjct: 134 QIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVS 193
Query: 279 SELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIF 338
S +V K+IGE +R++RE+F A R+H P IIF
Sbjct: 194 SSIVDKYIGESARLIREMFNYA-----------------------------RDHQPCIIF 224
Query: 339 MDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
MDEID+IG R G+ D E+QRT++ELLNQ+DGF+
Sbjct: 225 MDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDT 262
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 35/46 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA +C F++V S +V K+IGE +R++RE+F AR
Sbjct: 171 TGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYAR 216
>gi|159469321|ref|XP_001692816.1| 26S proteasome regulatory subunit [Chlamydomonas reinhardtii]
gi|158278069|gb|EDP03835.1| 26S proteasome regulatory subunit [Chlamydomonas reinhardtii]
Length = 427
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 131/317 (41%), Positives = 181/317 (57%), Gaps = 43/317 (13%)
Query: 71 DVDEAIKSSEGFKPYY--VTKIEE--------LQLIVAEKEQNLRRLQAQRNELNAKVRM 120
+ D A + G PY + K+E+ + + KE + R +L + +M
Sbjct: 21 ETDIAFLKNYGLGPYAAPIKKVEQDVKDVLKRINDVCGVKESDTGLAPPSRWDLVSDKQM 80
Query: 121 LREELQLLQEQGSYVGEVVKP-MDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALR 179
+EE L Q + +++ P D K ++ V KFVV + + D+ RV +
Sbjct: 81 QQEEQPL---QVARCTKIINPNTDDAKYVINVKQIAKFVVGLGDKVAPTDIEEGMRVGVD 137
Query: 180 NESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDA 239
Y + LP K+DP V++M VE+ PD TY +GG Q+ +++EV+ELP+ HPE F
Sbjct: 138 RTKYQIQIPLPPKIDPSVTMMTVEEKPDITYSDIGGSKEQMDKMREVVELPMLHPEKFVQ 197
Query: 240 LGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVM 299
LGI PKGVL+YGPPGTGKTLLARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF M
Sbjct: 198 LGIDPPKGVLMYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQM 257
Query: 300 ASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSE 359
A KK C I+F DE+D+IG +R + G+GGD+E
Sbjct: 258 ARSKK---------------------AC--------IVFFDEVDAIGGARFDDGAGGDNE 288
Query: 360 VQRTMLELLNQLDGFEA 376
VQRTMLE++NQLDGF+A
Sbjct: 289 VQRTMLEIVNQLDGFDA 305
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTLLARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 214 TGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSK 261
>gi|125775059|ref|XP_001358781.1| GA18789 [Drosophila pseudoobscura pseudoobscura]
gi|54638522|gb|EAL27924.1| GA18789 [Drosophila pseudoobscura pseudoobscura]
Length = 439
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 119/288 (41%), Positives = 176/288 (61%), Gaps = 33/288 (11%)
Query: 89 KIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVL 148
+I++ ++ E +N RL+ Q + K R ++ L+ VG + + +D +
Sbjct: 66 RIKDYLMMEDEFIRNQERLKPQ----DEKNEEERSKVDDLRGTPMSVGNLEEIIDDNHAI 121
Query: 149 VKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDS 208
V + V I +D + + P C V L ++ + + +L + DP+V++M +EK P
Sbjct: 122 VSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTDPMVTVMKLEKAPQE 181
Query: 209 TYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH 268
TY +GGLD QI+EIKE +ELP+ HPE ++ +GI PKGV+LYGPPGTGKTLLA+AVA+
Sbjct: 182 TYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQ 241
Query: 269 TECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCN 328
T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 242 TSATFLRVVGSELIQKYLGDGPKLVRELFRVAE--------------------------- 274
Query: 329 FREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
EHAPSI+F+DEID++G+ R +S SGG+ E+QRTMLELLNQLDGF++
Sbjct: 275 --EHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDS 320
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 229 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 273
>gi|37932204|gb|AAP72958.1| 26S proteasome subunit 7-like protein [Lactuca sativa]
Length = 426
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 121/265 (45%), Positives = 163/265 (61%), Gaps = 33/265 (12%)
Query: 113 ELNAKVRMLREELQLLQEQGSYVGEVVKP-MDKKKVLVKVHPEGKFVVDIDKNIDINDVT 171
+L + +M++EE L Q + +++ P + K ++ V KFVV + + D+
Sbjct: 72 DLVSDKQMMQEEQPL---QVARCTKIINPNTEDAKYVINVKQIAKFVVGLGDKVSPTDIE 128
Query: 172 PNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPV 231
RV + Y + LP K+DP V++M VE+ PD TY VGG QI++++EV+ELP+
Sbjct: 129 EGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPM 188
Query: 232 KHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSR 291
HPE F LGI PKGVL YGPPGTGKTLLARAVA+ T+ FIRV GSELVQK++GEG+R
Sbjct: 189 LHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGAR 248
Query: 292 MVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIE 351
MVRELF MA KK I+F DE+D+IG +R +
Sbjct: 249 MVRELFQMARSKKAC-----------------------------IVFFDEVDAIGGARFD 279
Query: 352 SGSGGDSEVQRTMLELLNQLDGFEA 376
G+GGD+EVQRTMLE++NQLDGF+A
Sbjct: 280 DGAGGDNEVQRTMLEIVNQLDGFDA 304
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTLLARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 213 TGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSK 260
>gi|37932196|gb|AAP72957.1| 26S proteasome subunit 7-like protein [Lactuca sativa]
Length = 426
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 121/265 (45%), Positives = 163/265 (61%), Gaps = 33/265 (12%)
Query: 113 ELNAKVRMLREELQLLQEQGSYVGEVVKP-MDKKKVLVKVHPEGKFVVDIDKNIDINDVT 171
+L + +M++EE L Q + +++ P + K ++ V KFVV + + D+
Sbjct: 72 DLVSDKQMMQEEQPL---QVARCTKIINPNTEDAKYVINVKQIAKFVVGLGDKVSPTDIE 128
Query: 172 PNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPV 231
RV + Y + LP K+DP V++M VE+ PD TY VGG QI++++EV+ELP+
Sbjct: 129 EGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPM 188
Query: 232 KHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSR 291
HPE F LGI PKGVL YGPPGTGKTLLARAVA+ T+ FIRV GSELVQK++GEG+R
Sbjct: 189 LHPEKFVQLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGAR 248
Query: 292 MVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIE 351
MVRELF MA KK I+F DE+D+IG +R +
Sbjct: 249 MVRELFQMARSKKAC-----------------------------IVFFDEVDAIGGARFD 279
Query: 352 SGSGGDSEVQRTMLELLNQLDGFEA 376
G+GGD+EVQRTMLE++NQLDGF+A
Sbjct: 280 DGAGGDNEVQRTMLEIVNQLDGFDA 304
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTLLARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 213 TGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSK 260
>gi|357620831|gb|EHJ72875.1| 26S protease regulatory subunit [Danaus plexippus]
Length = 334
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 111/242 (45%), Positives = 156/242 (64%), Gaps = 29/242 (11%)
Query: 135 VGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVD 194
VG + + +D +V + V I +D + + P C V L ++ + + +L + D
Sbjct: 3 VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLGDDTD 62
Query: 195 PLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPP 254
P+VS+M +EK P TY +GGLD QI+EIKE +ELP+ HPE ++ +GI PKGV+LYGPP
Sbjct: 63 PMVSVMKLEKAPQETYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPP 122
Query: 255 GTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLF 314
GTGKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 123 GTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA-------------- 168
Query: 315 WSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGF 374
EHAPSI+F+DEID++G+ R +S SGG+ E+QRTMLELLNQLDGF
Sbjct: 169 ---------------EEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGF 213
Query: 375 EA 376
++
Sbjct: 214 DS 215
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 124 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 168
>gi|2492519|sp|Q41365.1|PRS7_SPIOL RecName: Full=26S protease regulatory subunit 7; AltName: Full=26S
proteasome AAA-ATPase subunit RPT1; AltName: Full=26S
proteasome subunit 7; AltName: Full=Regulatory particle
triple-A ATPase subunit 1
gi|1395191|dbj|BAA13021.1| 26S proteasome ATPase subunit [Spinacia oleracea]
Length = 426
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 131/312 (41%), Positives = 182/312 (58%), Gaps = 37/312 (11%)
Query: 73 DEAIKSSEGFKPYY--VTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRM-LREELQLLQ 129
D A+ + G PY + K+E+ +++K +L ++ L A + L + Q++Q
Sbjct: 22 DIALLKTYGLGPYSASIKKVEKEIKDMSKKVNDLIGIKESDTGLAAPSQWDLVSDKQMMQ 81
Query: 130 E----QGSYVGEVVKP-MDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYT 184
E Q + +++ P + K ++ V KFVV + + D+ RV + Y
Sbjct: 82 EEQPLQVARCTKIINPNTEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQ 141
Query: 185 LHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQ 244
+ LP K+DP V++M VE+ PD TY VGG QI++++EV+ELP+ HPE F LGI
Sbjct: 142 IQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDP 201
Query: 245 PKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKK 304
PKGVL YGPPGTGKTLLARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 202 PKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKK 261
Query: 305 LAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTM 364
I+F DE+D+IG +R + G GGD+EVQRTM
Sbjct: 262 AC-----------------------------IVFFDEVDAIGGARFDDGVGGDNEVQRTM 292
Query: 365 LELLNQLDGFEA 376
LE++NQLDGF+A
Sbjct: 293 LEIVNQLDGFDA 304
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTLLARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 213 TGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSK 260
>gi|392883036|gb|AFM90350.1| 26S protease regulatory subunit 7 isoform 1 [Callorhinchus milii]
Length = 435
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 115/230 (50%), Positives = 146/230 (63%), Gaps = 29/230 (12%)
Query: 146 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
K ++ V KFVVD+ + D+ RV + Y +H LP K+DP V++M VE+
Sbjct: 112 KYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEK 171
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
PD TY VGG QI++++EV+E P+ HPE F LGI PKGVLL+GPPGTGKTL ARAV
Sbjct: 172 PDVTYSDVGGCKEQIEKLREVVETPLLHPESFVNLGIEPPKGVLLFGPPGTGKTLCARAV 231
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTI 325
+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 232 TNRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKK--------------------- 270
Query: 326 VCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C +IF DEID+IG +R + G+GGD+EVQRTMLEL+NQLDGF+
Sbjct: 271 AC--------LIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFD 312
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 40/48 (83%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAV + T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 222 TGKTLCARAVTNRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTK 269
>gi|396472968|ref|XP_003839239.1| similar to 26S protease regulatory subunit 7 [Leptosphaeria
maculans JN3]
gi|312215808|emb|CBX95760.1| similar to 26S protease regulatory subunit 7 [Leptosphaeria
maculans JN3]
Length = 439
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 121/264 (45%), Positives = 162/264 (61%), Gaps = 29/264 (10%)
Query: 113 ELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTP 172
++ A + ++EE L + + + + K DK K ++ V KFVV++ + + D+
Sbjct: 83 DIAADRQRMQEEQPLQVARCTKIIQDDKDPDKSKYVINVKQIAKFVVNLGERVSPTDIEE 142
Query: 173 NCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVK 232
RV + Y + LP K+DP V++M VE PD TY VGG QI++++EV+E+P+
Sbjct: 143 GMRVGVDRNKYQIMLPLPPKIDPSVTMMTVEDKPDVTYGDVGGCKEQIEKLREVVEMPLL 202
Query: 233 HPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRM 292
PE F LGI PKG LLYGPPGTGKTL ARAVA+ T+ TFIRV GSELVQK++GEG+RM
Sbjct: 203 SPERFVNLGIDPPKGALLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARM 262
Query: 293 VRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIES 352
VRELF MA KK C IIF DEID++G +R +
Sbjct: 263 VRELFEMARTKK---------------------AC--------IIFFDEIDAVGGARFDD 293
Query: 353 GSGGDSEVQRTMLELLNQLDGFEA 376
G+GGD+EVQRTMLEL+ QLDGF+A
Sbjct: 294 GAGGDNEVQRTMLELITQLDGFDA 317
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 226 TGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTK 273
>gi|288930996|ref|YP_003435056.1| 26S proteasome subunit P45 family [Ferroglobus placidus DSM 10642]
gi|288893244|gb|ADC64781.1| 26S proteasome subunit P45 family [Ferroglobus placidus DSM 10642]
Length = 400
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 122/284 (42%), Positives = 169/284 (59%), Gaps = 29/284 (10%)
Query: 91 EELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVK 150
E L+ + E R ++++R +VR LR E++ L+ VG V ++ +V+VK
Sbjct: 21 ERLKELYRRLEDEKRYVESERIRYEREVRRLRSEIERLRSPPLLVGTVSDVLEDGRVIVK 80
Query: 151 VHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTY 210
KFVV ++ D+ P RVAL ++ + +LP DP+V V++ P+ Y
Sbjct: 81 SSTGPKFVVHASTYVNPADLKPGVRVALNQQTLAIVSVLPQSKDPMVYAFEVDEKPNVRY 140
Query: 211 EMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTE 270
+GGL+ QI+EI+E IELP+ P LF+ +GI PKGVLLYGPPGTGKTLLA+AVA T
Sbjct: 141 TDIGGLEKQIEEIREAIELPLLKPHLFEEIGIEPPKGVLLYGPPGTGKTLLAKAVATETN 200
Query: 271 CTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFR 330
TFIRV GSE VQK+IGEG+R+VRE+F +A R
Sbjct: 201 ATFIRVVGSEFVQKYIGEGARLVREVFQLA-----------------------------R 231
Query: 331 EHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGF 374
E APSIIF+DEID+I + R S + GD EVQRT+++LL ++DGF
Sbjct: 232 EKAPSIIFIDEIDAIAARRTASDTSGDREVQRTLMQLLAEMDGF 275
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 41/51 (80%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
+GKTLLA+AVA T TFIRV GSE VQK+IGEG+R+VRE+F +AR K S
Sbjct: 186 TGKTLLAKAVATETNATFIRVVGSEFVQKYIGEGARLVREVFQLAREKAPS 236
>gi|195112656|ref|XP_002000888.1| GI22277 [Drosophila mojavensis]
gi|193917482|gb|EDW16349.1| GI22277 [Drosophila mojavensis]
Length = 439
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 119/288 (41%), Positives = 176/288 (61%), Gaps = 33/288 (11%)
Query: 89 KIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVL 148
+I++ ++ E +N RL+ Q + K R ++ L+ VG + + +D +
Sbjct: 66 RIKDYLMMEDEFIRNQERLKPQ----DEKNEEERSKVDDLRGTPMSVGNLEEIIDDNHAI 121
Query: 149 VKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDS 208
V + V I +D + + P C V L ++ + + +L + DP+V++M +EK P
Sbjct: 122 VSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTDPMVTVMKLEKAPQE 181
Query: 209 TYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH 268
TY +GGLD QI+EIKE +ELP+ HPE ++ +GI PKGV+LYGPPGTGKTLLA+AVA+
Sbjct: 182 TYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQ 241
Query: 269 TECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCN 328
T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 242 TSATFLRVVGSELIQKYLGDGPKLVRELFRVAE--------------------------- 274
Query: 329 FREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
EHAPSI+F+DEID++G+ R +S SGG+ E+QRTMLELLNQLDGF++
Sbjct: 275 --EHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDS 320
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 229 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 273
>gi|81294202|gb|AAI07951.1| Psmc6 protein [Rattus norvegicus]
Length = 381
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 118/278 (42%), Positives = 165/278 (59%), Gaps = 29/278 (10%)
Query: 99 EKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFV 158
E + L+ L+ Q EL + +L+ LQ G VGEV+K + ++K +VK ++V
Sbjct: 13 EIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYV 72
Query: 159 VDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDN 218
V + +D + + P RVAL + T+ + LP +VDPLV M E + +Y +GGL
Sbjct: 73 VGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSE 132
Query: 219 QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSG 278
QI+E++EVIELP+ +PELF +GI PKG LLYGPPGTGKTLLARAVA +C F++V
Sbjct: 133 QIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVS 192
Query: 279 SELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIF 338
S +V K+IGE +R++RE+F A R+H P IIF
Sbjct: 193 SSIVDKYIGESARLIREMFNYA-----------------------------RDHQPCIIF 223
Query: 339 MDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
MDEID+IG R G+ D E+QRT++ELLNQ+DGF+
Sbjct: 224 MDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDT 261
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 35/46 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA +C F++V S +V K+IGE +R++RE+F AR
Sbjct: 170 TGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYAR 215
>gi|194742744|ref|XP_001953861.1| GF17023 [Drosophila ananassae]
gi|190626898|gb|EDV42422.1| GF17023 [Drosophila ananassae]
Length = 446
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 117/275 (42%), Positives = 169/275 (61%), Gaps = 33/275 (12%)
Query: 102 QNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDI 161
+N RL+ Q + K R ++ L+ VG + + +D +V + V I
Sbjct: 86 RNQERLKPQ----DEKNEEERSKVDDLRGTPMSVGNLEEIIDDNHAIVSTSVGSEHYVSI 141
Query: 162 DKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIK 221
+D + + P C V L ++ + + +L + DP+V++M +EK P TY +GGLD QI+
Sbjct: 142 LSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTDPMVTVMKLEKAPQETYADIGGLDTQIQ 201
Query: 222 EIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSEL 281
EIKE +ELP+ HPE ++ +GI PKGV+LYGPPGTGKTLLA+AVA+ T TF+RV GSEL
Sbjct: 202 EIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSEL 261
Query: 282 VQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDE 341
+QK++G+G ++VRELF +A EHAPSI+F+DE
Sbjct: 262 IQKYLGDGPKLVRELFRVAE-----------------------------EHAPSIVFIDE 292
Query: 342 IDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
ID++G+ R +S SGG+ E+QRTMLELLNQLDGF++
Sbjct: 293 IDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDS 327
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 236 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 280
>gi|41053325|ref|NP_956327.1| proteasome (prosome, macropain) 26S subunit, ATPase, 1 [Danio
rerio]
gi|29436782|gb|AAH49471.1| Proteasome (prosome, macropain) 26S subunit, ATPase, 1a [Danio
rerio]
Length = 440
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 120/276 (43%), Positives = 168/276 (60%), Gaps = 29/276 (10%)
Query: 101 EQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVD 160
E+ R Q Q L K R ++ L+ VG + + +D +V + V
Sbjct: 75 EEEFIRDQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVS 134
Query: 161 IDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQI 220
I +D + + P C V L ++ + + +L + DPLV++M VEK P TY +GGLD+QI
Sbjct: 135 ILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDSQI 194
Query: 221 KEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSE 280
+EIKE +ELP+ HPE ++ +GI PKGV+LYG PGTGKTLLA+AVA+ T TF+RV GSE
Sbjct: 195 QEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSE 254
Query: 281 LVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMD 340
L+QK++G+G ++VRELF +A EHAPSI+F+D
Sbjct: 255 LIQKYLGDGPKLVRELFRVAE-----------------------------EHAPSIVFID 285
Query: 341 EIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
EID+IG+ R +S SGG+ E+QRTMLELLNQLDGF++
Sbjct: 286 EIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDS 321
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 230 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 274
>gi|291234647|ref|XP_002737255.1| PREDICTED: proteasome 26S ATPase subunit 2-like [Saccoglossus
kowalevskii]
Length = 435
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 134/311 (43%), Positives = 178/311 (57%), Gaps = 37/311 (11%)
Query: 73 DEAIKSSEGFKPYY--VTKIEELQLIVAEKEQNLRRLQAQRNEL-NAKVRMLREELQLLQ 129
D A+ + G PY + ++E+ + +K L ++ L N + L + Q LQ
Sbjct: 31 DIALLKTYGVGPYAKSIKQVEDDISNITKKVNELTGIKESDTGLANPALWDLAADKQTLQ 90
Query: 130 -EQGSYVGEVVKPMDKK----KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYT 184
EQ V K ++ K ++ V KFVVD+ + D+ RV + Y
Sbjct: 91 SEQPLQVARCTKIINADSEDAKYIINVKQFAKFVVDLHDQVAPTDIEEGMRVGVDRNKYQ 150
Query: 185 LHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQ 244
+H LP K+DP V++M VE+ PD TY VGG QI +++EV+E P+ HPE F LGI
Sbjct: 151 IHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIDKLREVVETPLLHPERFVNLGIEP 210
Query: 245 PKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKK 304
PKGVLL+GPPGTGKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 211 PKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARSKK 270
Query: 305 LAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTM 364
C +IF DEID+IG +R + G+GGD+EVQRTM
Sbjct: 271 ---------------------AC--------LIFFDEIDAIGGARFDDGAGGDNEVQRTM 301
Query: 365 LELLNQLDGFE 375
LEL+NQLDGF+
Sbjct: 302 LELINQLDGFD 312
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 222 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARSK 269
>gi|289740351|gb|ADD18923.1| 26S proteasome regulatory complex ATPase RPT2 [Glossina morsitans
morsitans]
Length = 439
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 117/275 (42%), Positives = 169/275 (61%), Gaps = 33/275 (12%)
Query: 102 QNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDI 161
+N RL+ Q + K R ++ L+ VG + + +D +V + V I
Sbjct: 79 RNQERLKPQ----DEKNEEERSKVDDLRGTPMSVGNLEEIIDDNHAIVSTSVGSEHYVSI 134
Query: 162 DKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIK 221
+D + + P C V L ++ + + +L + DP+V++M +EK P TY +GGLD QI+
Sbjct: 135 LSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTDPMVTVMKLEKAPQETYADIGGLDTQIQ 194
Query: 222 EIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSEL 281
EIKE +ELP+ HPE ++ +GI PKGV+LYGPPGTGKTLLA+AVA+ T TF+RV GSEL
Sbjct: 195 EIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSEL 254
Query: 282 VQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDE 341
+QK++G+G ++VRELF +A EHAPSI+F+DE
Sbjct: 255 IQKYLGDGPKLVRELFRVAE-----------------------------EHAPSIVFIDE 285
Query: 342 IDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
ID++G+ R +S SGG+ E+QRTMLELLNQLDGF++
Sbjct: 286 IDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDS 320
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 229 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 273
>gi|195390229|ref|XP_002053771.1| GJ24070 [Drosophila virilis]
gi|194151857|gb|EDW67291.1| GJ24070 [Drosophila virilis]
Length = 444
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 119/288 (41%), Positives = 176/288 (61%), Gaps = 33/288 (11%)
Query: 89 KIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVL 148
+I++ ++ E +N RL+ Q + K R ++ L+ VG + + +D +
Sbjct: 71 RIKDYLMMEDEFIRNQERLKPQ----DEKNEEERSKVDDLRGTPMSVGNLEEIIDDNHAI 126
Query: 149 VKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDS 208
V + V I +D + + P C V L ++ + + +L + DP+V++M +EK P
Sbjct: 127 VSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTDPMVTVMKLEKAPQE 186
Query: 209 TYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH 268
TY +GGLD QI+EIKE +ELP+ HPE ++ +GI PKGV+LYGPPGTGKTLLA+AVA+
Sbjct: 187 TYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQ 246
Query: 269 TECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCN 328
T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 247 TSATFLRVVGSELIQKYLGDGPKLVRELFRVAE--------------------------- 279
Query: 329 FREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
EHAPSI+F+DEID++G+ R +S SGG+ E+QRTMLELLNQLDGF++
Sbjct: 280 --EHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDS 325
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 234 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 278
>gi|326921318|ref|XP_003206908.1| PREDICTED: 26S protease regulatory subunit 10B-like [Meleagris
gallopavo]
Length = 372
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 117/272 (43%), Positives = 163/272 (59%), Gaps = 29/272 (10%)
Query: 105 RRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKN 164
++L+ Q EL + +L+ LQ G VGEV+K + ++K +VK ++VV +
Sbjct: 10 QQLREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQ 69
Query: 165 IDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIK 224
+D + + P RVAL + T+ + LP +VDPLV M E D +Y +GGL QI+E++
Sbjct: 70 LDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDVSYSEIGGLSEQIRELR 129
Query: 225 EVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQK 284
EVIELP+ +PELF +GI PKG LLYGPPGTGKTLLARAVA +C F++V S +V K
Sbjct: 130 EVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDK 189
Query: 285 FIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDS 344
+IGE +R++RE+F A R+H P IIFMDEID+
Sbjct: 190 YIGESARLIREMFNYA-----------------------------RDHQPCIIFMDEIDA 220
Query: 345 IGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
IG R G+ D E+QRT++ELLNQ+DGF+
Sbjct: 221 IGGRRFSEGTSADREIQRTLMELLNQMDGFDT 252
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 35/46 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA +C F++V S +V K+IGE +R++RE+F AR
Sbjct: 161 TGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYAR 206
>gi|50555003|ref|XP_504910.1| YALI0F02585p [Yarrowia lipolytica]
gi|49650780|emb|CAG77715.1| YALI0F02585p [Yarrowia lipolytica CLIB122]
Length = 436
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 121/287 (42%), Positives = 179/287 (62%), Gaps = 33/287 (11%)
Query: 89 KIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVL 148
+I++ L+ E QN RL N L+ KV R ++ L+ VG + + +D +
Sbjct: 63 RIKDHLLLEEEFVQNQERL----NPLDDKVAEERSKVDTLRGSPMGVGTLEEIIDDDHAI 118
Query: 149 VKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDS 208
V ++ V I +D + + P C V L +++ ++ +L + DP+VS+M ++K P
Sbjct: 119 VSSTSGPEYYVSIMSFVDKDLLEPGCSVLLHHKTVSVVGVLQDDADPMVSVMKLDKAPTE 178
Query: 209 TYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH 268
+Y +GGL++QI+EIKE +ELP+ HPEL++ +GI PKGV+LYG PGTGKTLLA+AVA+
Sbjct: 179 SYADIGGLESQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQ 238
Query: 269 TECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCN 328
T TF+R+ GSEL+QK++G+G R+ R++F +A+
Sbjct: 239 TSATFLRIVGSELIQKYLGDGPRLCRQIFQIAA--------------------------- 271
Query: 329 FREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
EHAPSI+F+DEID+IG+ R ES SGG+ EVQRTMLELLNQLDGF+
Sbjct: 272 --EHAPSIVFIDEIDAIGTKRYESTSGGEREVQRTMLELLNQLDGFD 316
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 38/45 (84%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+R+ GSEL+QK++G+G R+ R++F +A
Sbjct: 226 TGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPRLCRQIFQIA 270
>gi|24649446|ref|NP_524469.2| proteasome 26S subunit subunit 4 ATPase [Drosophila melanogaster]
gi|195331448|ref|XP_002032413.1| GM23527 [Drosophila sechellia]
gi|195573289|ref|XP_002104626.1| GD18337 [Drosophila simulans]
gi|30581054|sp|P48601.2|PRS4_DROME RecName: Full=26S protease regulatory subunit 4; Short=P26s4
gi|7301070|gb|AAF56205.1| proteasome 26S subunit subunit 4 ATPase [Drosophila melanogaster]
gi|16198307|gb|AAL13988.1| SD02658p [Drosophila melanogaster]
gi|194121356|gb|EDW43399.1| GM23527 [Drosophila sechellia]
gi|194200553|gb|EDX14129.1| GD18337 [Drosophila simulans]
gi|220956224|gb|ACL90655.1| Pros26.4-PA [synthetic construct]
Length = 439
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 117/275 (42%), Positives = 169/275 (61%), Gaps = 33/275 (12%)
Query: 102 QNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDI 161
+N RL+ Q + K R ++ L+ VG + + +D +V + V I
Sbjct: 79 RNQERLKPQ----DEKNEEERSKVDDLRGTPMSVGNLEEIIDDNHAIVSTSVGSEHYVSI 134
Query: 162 DKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIK 221
+D + + P C V L ++ + + +L + DP+V++M +EK P TY +GGLD QI+
Sbjct: 135 LSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTDPMVTVMKLEKAPQETYADIGGLDTQIQ 194
Query: 222 EIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSEL 281
EIKE +ELP+ HPE ++ +GI PKGV+LYGPPGTGKTLLA+AVA+ T TF+RV GSEL
Sbjct: 195 EIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSEL 254
Query: 282 VQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDE 341
+QK++G+G ++VRELF +A EHAPSI+F+DE
Sbjct: 255 IQKYLGDGPKLVRELFRVAE-----------------------------EHAPSIVFIDE 285
Query: 342 IDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
ID++G+ R +S SGG+ E+QRTMLELLNQLDGF++
Sbjct: 286 IDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDS 320
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 229 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 273
>gi|258575429|ref|XP_002541896.1| 26S protease regulatory subunit 7 [Uncinocarpus reesii 1704]
gi|237902162|gb|EEP76563.1| 26S protease regulatory subunit 7 [Uncinocarpus reesii 1704]
Length = 439
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 117/237 (49%), Positives = 149/237 (62%), Gaps = 29/237 (12%)
Query: 140 KPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSL 199
K DK K ++ V KFVV+I + + D+ RV + Y + LP K+DP V++
Sbjct: 110 KDPDKSKYVINVKQIAKFVVNIGERVSPTDIEEGMRVGVDRNKYQILLPLPPKIDPSVTM 169
Query: 200 MMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKT 259
M VE PD TY +GG QI++++EV+E+P+ PE F LGI PKG LLYGPPGTGKT
Sbjct: 170 MTVEDKPDVTYGDIGGCKEQIEKLREVVEMPLLSPERFVGLGIDPPKGALLYGPPGTGKT 229
Query: 260 LLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLT 319
L ARAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 230 LCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKK--------------- 274
Query: 320 ILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
C IIF DEID++G +R + G+GGD+EVQRTMLEL+ QLDGF+A
Sbjct: 275 ------AC--------IIFFDEIDAVGGARFDDGAGGDNEVQRTMLELITQLDGFDA 317
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 226 TGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTK 273
>gi|1526426|dbj|BAA11338.1| proteasome subunit p42 [Homo sapiens]
Length = 389
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 118/278 (42%), Positives = 165/278 (59%), Gaps = 29/278 (10%)
Query: 99 EKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFV 158
E + L+ L+ Q EL + +L+ LQ G VGEV+K + ++K +VK ++V
Sbjct: 21 EIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYV 80
Query: 159 VDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDN 218
V + +D + + P RVAL + T+ + LP +VDPLV M E + +Y +GGL
Sbjct: 81 VGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSE 140
Query: 219 QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSG 278
QI+E++EVIELP+ +PELF +GI PKG LLYGPPGTGKTLLARAVA +C F++V
Sbjct: 141 QIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVS 200
Query: 279 SELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIF 338
S +V K+IGE +R++RE+F A R+H P IIF
Sbjct: 201 SSIVDKYIGESARLIREMFNYA-----------------------------RDHQPCIIF 231
Query: 339 MDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
MDEID+IG R G+ D E+QRT++ELLNQ+DGF+
Sbjct: 232 MDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDT 269
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 35/46 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA +C F++V S +V K+IGE +R++RE+F AR
Sbjct: 178 TGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYAR 223
>gi|114053003|ref|NP_001039705.1| 26S protease regulatory subunit 10B [Bos taurus]
gi|119390895|sp|Q2KIW6.1|PRS10_BOVIN RecName: Full=26S protease regulatory subunit 10B; AltName:
Full=26S proteasome AAA-ATPase subunit RPT4; AltName:
Full=Proteasome 26S subunit ATPase 6
gi|86827363|gb|AAI12483.1| Proteasome (prosome, macropain) 26S subunit, ATPase, 6 [Bos taurus]
Length = 389
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 118/278 (42%), Positives = 165/278 (59%), Gaps = 29/278 (10%)
Query: 99 EKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFV 158
E + L+ L+ Q EL + +L+ LQ G VGEV+K + ++K +VK ++V
Sbjct: 21 EIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYV 80
Query: 159 VDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDN 218
V + +D + + P RVAL + T+ + LP +VDPLV M E + +Y +GGL
Sbjct: 81 VGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSE 140
Query: 219 QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSG 278
QI+E++EVIELP+ +PELF +GI PKG LLYGPPGTGKTLLARAVA +C F++V
Sbjct: 141 QIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVS 200
Query: 279 SELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIF 338
S +V K+IGE +R++RE+F A R+H P IIF
Sbjct: 201 SSIVDKYIGESARLIREMFNYA-----------------------------RDHQPCIIF 231
Query: 339 MDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
MDEID+IG R G+ D E+QRT++ELLNQ+DGF+
Sbjct: 232 MDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDT 269
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 35/46 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA +C F++V S +V K+IGE +R++RE+F AR
Sbjct: 178 TGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYAR 223
>gi|27754103|ref|NP_080235.2| 26S protease regulatory subunit 10B [Mus musculus]
gi|354497334|ref|XP_003510776.1| PREDICTED: 26S protease regulatory subunit 10B [Cricetulus griseus]
gi|51702772|sp|P62333.1|PRS10_HUMAN RecName: Full=26S protease regulatory subunit 10B; AltName:
Full=26S proteasome AAA-ATPase subunit RPT4; AltName:
Full=Proteasome 26S subunit ATPase 6; AltName:
Full=Proteasome subunit p42
gi|55977306|sp|P62334.1|PRS10_MOUSE RecName: Full=26S protease regulatory subunit 10B; AltName:
Full=26S proteasome AAA-ATPase subunit RPT4; AltName:
Full=Proteasome 26S subunit ATPase 6; AltName:
Full=Proteasome subunit p42
gi|59800155|sp|P62335.1|PRS10_SPETR RecName: Full=26S protease regulatory subunit 10B; AltName:
Full=26S proteasome AAA-ATPase subunit RPT4; AltName:
Full=Conserved ATPase domain protein 44; Short=CADp44;
AltName: Full=Proteasome 26S subunit ATPase 6; AltName:
Full=Proteasome subunit p42
gi|1045497|gb|AAB40354.1| conserved ATPase domain protein 44 [Spermophilus tridecemlineatus]
gi|2213932|gb|AAB61616.1| 26S proteasome regulatory subunit [Homo sapiens]
gi|12848757|dbj|BAB28078.1| unnamed protein product [Mus musculus]
gi|13529266|gb|AAH05390.1| Proteasome (prosome, macropain) 26S subunit, ATPase, 6 [Homo
sapiens]
gi|30582525|gb|AAP35489.1| proteasome (prosome, macropain) 26S subunit, ATPase, 6 [Homo
sapiens]
gi|48145535|emb|CAG32990.1| PSMC6 [Homo sapiens]
gi|61361236|gb|AAX42017.1| proteasome 26S subunit 6 [synthetic construct]
gi|61361244|gb|AAX42018.1| proteasome 26S subunit 6 [synthetic construct]
gi|74185083|dbj|BAE39144.1| unnamed protein product [Mus musculus]
gi|74194908|dbj|BAE26034.1| unnamed protein product [Mus musculus]
gi|109733764|gb|AAI16753.1| Proteasome (prosome, macropain) 26S subunit, ATPase, 6 [Mus
musculus]
gi|111601154|gb|AAI19169.1| Proteasome (prosome, macropain) 26S subunit, ATPase, 6 [Mus
musculus]
gi|119586049|gb|EAW65645.1| proteasome (prosome, macropain) 26S subunit, ATPase, 6 [Homo
sapiens]
gi|123994057|gb|ABM84630.1| proteasome (prosome, macropain) 26S subunit, ATPase, 6 [synthetic
construct]
gi|148688745|gb|EDL20692.1| proteasome (prosome, macropain) 26S subunit, ATPase, 6, isoform
CRA_b [Mus musculus]
gi|189053915|dbj|BAG36422.1| unnamed protein product [Homo sapiens]
gi|208967156|dbj|BAG73592.1| proteasome (prosome, macropain) 26S subunit, ATPase, 6 [synthetic
construct]
gi|296483635|tpg|DAA25750.1| TPA: 26S protease regulatory subunit S10B [Bos taurus]
gi|335775939|gb|AEH58739.1| 26S protease regulatory subunit S10B-like protein [Equus caballus]
Length = 389
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 118/278 (42%), Positives = 165/278 (59%), Gaps = 29/278 (10%)
Query: 99 EKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFV 158
E + L+ L+ Q EL + +L+ LQ G VGEV+K + ++K +VK ++V
Sbjct: 21 EIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYV 80
Query: 159 VDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDN 218
V + +D + + P RVAL + T+ + LP +VDPLV M E + +Y +GGL
Sbjct: 81 VGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSE 140
Query: 219 QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSG 278
QI+E++EVIELP+ +PELF +GI PKG LLYGPPGTGKTLLARAVA +C F++V
Sbjct: 141 QIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVS 200
Query: 279 SELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIF 338
S +V K+IGE +R++RE+F A R+H P IIF
Sbjct: 201 SSIVDKYIGESARLIREMFNYA-----------------------------RDHQPCIIF 231
Query: 339 MDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
MDEID+IG R G+ D E+QRT++ELLNQ+DGF+
Sbjct: 232 MDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDT 269
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 35/46 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA +C F++V S +V K+IGE +R++RE+F AR
Sbjct: 178 TGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYAR 223
>gi|195053572|ref|XP_001993700.1| GH19692 [Drosophila grimshawi]
gi|193895570|gb|EDV94436.1| GH19692 [Drosophila grimshawi]
Length = 439
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 117/275 (42%), Positives = 169/275 (61%), Gaps = 33/275 (12%)
Query: 102 QNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDI 161
+N RL+ Q + K R ++ L+ VG + + +D +V + V I
Sbjct: 79 RNQERLKPQ----DEKNEEERSKVDDLRGTPMSVGNLEEIIDDNHAIVSTSVGSEHYVSI 134
Query: 162 DKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIK 221
+D + + P C V L ++ + + +L + DP+V++M +EK P TY +GGLD QI+
Sbjct: 135 LSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTDPMVTVMKLEKAPQETYADIGGLDTQIQ 194
Query: 222 EIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSEL 281
EIKE +ELP+ HPE ++ +GI PKGV+LYGPPGTGKTLLA+AVA+ T TF+RV GSEL
Sbjct: 195 EIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSEL 254
Query: 282 VQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDE 341
+QK++G+G ++VRELF +A EHAPSI+F+DE
Sbjct: 255 IQKYLGDGPKLVRELFRVAE-----------------------------EHAPSIVFIDE 285
Query: 342 IDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
ID++G+ R +S SGG+ E+QRTMLELLNQLDGF++
Sbjct: 286 IDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDS 320
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 229 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 273
>gi|313239604|emb|CBY14503.1| unnamed protein product [Oikopleura dioica]
Length = 435
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 123/290 (42%), Positives = 179/290 (61%), Gaps = 37/290 (12%)
Query: 89 KIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGS--YVGEVVKPMDKKK 146
+I++ L+ E +N R+ Q ++ N + R EE++ GS VG + + +D+
Sbjct: 62 RIKDFLLMEEEYIKNQERMNPQEDK-NEEERSKIEEVR-----GSPMAVGSLEEIIDENH 115
Query: 147 VLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVP 206
+V + V+I +D + + P C V + ++ + + +L + DPLVS+M +EK P
Sbjct: 116 AIVSTSVGSEHYVNIYSFVDKDQLEPGCTVLMNHKVHAVVGVLSDDTDPLVSVMKLEKAP 175
Query: 207 DSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVA 266
TY +GGLD QI EIKE +ELP+ HPE ++ +GI PKGV+LYGPPGTGKTLLA+AVA
Sbjct: 176 TETYADIGGLDQQITEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVA 235
Query: 267 HHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIV 326
+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 236 NQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAE------------------------- 270
Query: 327 CNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
++APSI+FMDEID+IG R +S SGG+ E+QRTMLELLNQLDGF++
Sbjct: 271 ----DNAPSIVFMDEIDAIGMKRYDSNSGGEREIQRTMLELLNQLDGFDS 316
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 40/51 (78%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A S
Sbjct: 225 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEDNAPS 275
>gi|194910105|ref|XP_001982075.1| GG12390 [Drosophila erecta]
gi|195445240|ref|XP_002070237.1| GK11948 [Drosophila willistoni]
gi|195505012|ref|XP_002099325.1| GE10845 [Drosophila yakuba]
gi|190656713|gb|EDV53945.1| GG12390 [Drosophila erecta]
gi|194166322|gb|EDW81223.1| GK11948 [Drosophila willistoni]
gi|194185426|gb|EDW99037.1| GE10845 [Drosophila yakuba]
Length = 439
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 117/275 (42%), Positives = 169/275 (61%), Gaps = 33/275 (12%)
Query: 102 QNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDI 161
+N RL+ Q + K R ++ L+ VG + + +D +V + V I
Sbjct: 79 RNQERLKPQ----DEKNEEERSKVDDLRGTPMSVGNLEEIIDDNHAIVSTSVGSEHYVSI 134
Query: 162 DKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIK 221
+D + + P C V L ++ + + +L + DP+V++M +EK P TY +GGLD QI+
Sbjct: 135 LSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTDPMVTVMKLEKAPQETYADIGGLDTQIQ 194
Query: 222 EIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSEL 281
EIKE +ELP+ HPE ++ +GI PKGV+LYGPPGTGKTLLA+AVA+ T TF+RV GSEL
Sbjct: 195 EIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSEL 254
Query: 282 VQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDE 341
+QK++G+G ++VRELF +A EHAPSI+F+DE
Sbjct: 255 IQKYLGDGPKLVRELFRVAE-----------------------------EHAPSIVFIDE 285
Query: 342 IDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
ID++G+ R +S SGG+ E+QRTMLELLNQLDGF++
Sbjct: 286 IDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDS 320
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 229 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 273
>gi|52548689|gb|AAU82538.1| ATP-dependent 26S proteasome regulatory subunit [uncultured
archaeon GZfos18C8]
Length = 497
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 126/314 (40%), Positives = 186/314 (59%), Gaps = 37/314 (11%)
Query: 70 MDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQA-------QRNELNAKVRMLR 122
MDVD I S+E F Y V ++++L+L E+ ++++ QR + ++R LR
Sbjct: 93 MDVDADIDSTE-FSKYVVDRMQQLELKNNLLEKQYQKVETEKQLAEDQRLKYERELRKLR 151
Query: 123 EELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNES 182
EL L+ VG +V +++ K +V+ +F+V + I D+ P +VAL E
Sbjct: 152 SELDKLKTTPQLVGTLVNVLEEGKSIVRSSTGPEFIVGSSQFIKDGDLKPGVQVALNKEH 211
Query: 183 YTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGI 242
++ ++P DPLV M V + PD Y +GGLD QI+ ++ +E + PE+F+ +GI
Sbjct: 212 LSIVAVIPGSEDPLVQAMEVIESPDIDYNQIGGLDKQIEVLRGAVEFALTKPEIFERIGI 271
Query: 243 AQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASL 302
PKGVLL+GPPGTGKTLLA+AVA T+ TFIRV GSELVQK+IGEG+RMVR++F MA
Sbjct: 272 DPPKGVLLFGPPGTGKTLLAKAVATRTDATFIRVVGSELVQKYIGEGARMVRDVFEMA-- 329
Query: 303 KKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQR 362
R+ AP+IIF+DE+DSIG+ R++ S G EVQR
Sbjct: 330 ---------------------------RKKAPAIIFIDELDSIGAVRLDDASSGGREVQR 362
Query: 363 TMLELLNQLDGFEA 376
T+++LL ++DGF +
Sbjct: 363 TLMQLLAEMDGFNS 376
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/51 (68%), Positives = 43/51 (84%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
+GKTLLA+AVA T+ TFIRV GSELVQK+IGEG+RMVR++F MAR K +
Sbjct: 285 TGKTLLAKAVATRTDATFIRVVGSELVQKYIGEGARMVRDVFEMARKKAPA 335
>gi|158254352|gb|AAI54337.1| Proteasome (prosome, macropain) 26S subunit, ATPase, 1a [Danio
rerio]
Length = 440
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 120/276 (43%), Positives = 168/276 (60%), Gaps = 29/276 (10%)
Query: 101 EQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVD 160
E+ R Q Q L K R ++ L+ VG + + +D +V + V
Sbjct: 75 EEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVS 134
Query: 161 IDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQI 220
I +D + + P C V L ++ + + +L + DPLV++M VEK P TY +GGLD+QI
Sbjct: 135 ILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDSQI 194
Query: 221 KEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSE 280
+EIKE +ELP+ HPE ++ +GI PKGV+LYG PGTGKTLLA+AVA+ T TF+RV GSE
Sbjct: 195 QEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSE 254
Query: 281 LVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMD 340
L+QK++G+G ++VRELF +A EHAPSI+F+D
Sbjct: 255 LIQKYLGDGPKLVRELFRVAE-----------------------------EHAPSIVFID 285
Query: 341 EIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
EID+IG+ R +S SGG+ E+QRTMLELLNQLDGF++
Sbjct: 286 EIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDS 321
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 230 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 274
>gi|170590440|ref|XP_001899980.1| Probable 26S protease regulatory subunit 7 [Brugia malayi]
gi|158592612|gb|EDP31210.1| Probable 26S protease regulatory subunit 7, putative [Brugia
malayi]
Length = 435
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 116/230 (50%), Positives = 146/230 (63%), Gaps = 29/230 (12%)
Query: 146 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
+ L+ V KFVVD+ + D+ RV + Y +H LP K+DP V++M VE+
Sbjct: 112 RYLINVKQFAKFVVDLADTVAPTDIEEGMRVGVDRNKYQIHLPLPAKIDPSVTMMQVEEK 171
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
PD TY VGG QI++++EV+E P+ HPE F LGI PKGVLLYGPPGTGKTL ARAV
Sbjct: 172 PDVTYADVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLYGPPGTGKTLCARAV 231
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTI 325
A+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 232 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARSKK--------------------- 270
Query: 326 VCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C +IF DEID++G +R + G GGD+EVQRTMLEL+NQLDGF+
Sbjct: 271 AC--------LIFFDEIDAVGGARFDDGMGGDNEVQRTMLELINQLDGFD 312
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 222 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARSK 269
>gi|312072869|ref|XP_003139262.1| hypothetical protein LOAG_03677 [Loa loa]
gi|307765567|gb|EFO24801.1| 26S protease regulatory subunit 7 [Loa loa]
Length = 435
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 116/230 (50%), Positives = 146/230 (63%), Gaps = 29/230 (12%)
Query: 146 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
+ L+ V KFVVD+ + D+ RV + Y +H LP K+DP V++M VE+
Sbjct: 112 RYLINVKQFAKFVVDLADTVAPTDIEEGMRVGVDRNKYQIHLPLPAKIDPSVTMMQVEEK 171
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
PD TY VGG QI++++EV+E P+ HPE F LGI PKGVLLYGPPGTGKTL ARAV
Sbjct: 172 PDVTYADVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLYGPPGTGKTLCARAV 231
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTI 325
A+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 232 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARSKK--------------------- 270
Query: 326 VCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C +IF DEID++G +R + G GGD+EVQRTMLEL+NQLDGF+
Sbjct: 271 AC--------LIFFDEIDAVGGARFDDGMGGDNEVQRTMLELINQLDGFD 312
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 222 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARSK 269
>gi|45361531|ref|NP_989342.1| proteasome (prosome, macropain) 26S subunit, ATPase, 6 [Xenopus
(Silurana) tropicalis]
gi|39850228|gb|AAH64227.1| proteasome (prosome, macropain) 26S subunit, ATPase, 6 [Xenopus
(Silurana) tropicalis]
gi|89266829|emb|CAJ83423.1| proteasome (prosome, macropain) 26S subunit, ATPase, 6 [Xenopus
(Silurana) tropicalis]
Length = 389
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 118/278 (42%), Positives = 164/278 (58%), Gaps = 29/278 (10%)
Query: 99 EKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFV 158
E + L+ L+ Q EL + +L+ LQ G VGEV+K + ++K +VK ++V
Sbjct: 21 EIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYV 80
Query: 159 VDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDN 218
V + +D + P RVAL + T+ + LP +VDPLV M E + +Y +GGL
Sbjct: 81 VGCRRQLDKTKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSE 140
Query: 219 QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSG 278
QI+E++EVIELP+ +PELF +GI PKG LLYGPPGTGKTLLARAVA +C F++V
Sbjct: 141 QIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVS 200
Query: 279 SELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIF 338
S +V K+IGE +R++RE+F A R+H P IIF
Sbjct: 201 SSIVDKYIGESARLIREMFNYA-----------------------------RDHQPCIIF 231
Query: 339 MDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
MDEID+IG R G+ D E+QRT++ELLNQ+DGF+
Sbjct: 232 MDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDT 269
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 35/46 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA +C F++V S +V K+IGE +R++RE+F AR
Sbjct: 178 TGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYAR 223
>gi|393911847|gb|EJD76478.1| 26S protease regulatory subunit 7, variant [Loa loa]
Length = 347
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 116/230 (50%), Positives = 146/230 (63%), Gaps = 29/230 (12%)
Query: 146 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
+ L+ V KFVVD+ + D+ RV + Y +H LP K+DP V++M VE+
Sbjct: 24 RYLINVKQFAKFVVDLADTVAPTDIEEGMRVGVDRNKYQIHLPLPAKIDPSVTMMQVEEK 83
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
PD TY VGG QI++++EV+E P+ HPE F LGI PKGVLLYGPPGTGKTL ARAV
Sbjct: 84 PDVTYADVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLYGPPGTGKTLCARAV 143
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTI 325
A+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 144 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARSKK--------------------- 182
Query: 326 VCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C +IF DEID++G +R + G GGD+EVQRTMLEL+NQLDGF+
Sbjct: 183 AC--------LIFFDEIDAVGGARFDDGMGGDNEVQRTMLELINQLDGFD 224
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 134 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARSK 181
>gi|356520182|ref|XP_003528743.1| PREDICTED: 26S protease regulatory subunit 7-like [Glycine max]
gi|356559376|ref|XP_003547975.1| PREDICTED: 26S protease regulatory subunit 7-like [Glycine max]
Length = 426
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 132/312 (42%), Positives = 181/312 (58%), Gaps = 37/312 (11%)
Query: 73 DEAIKSSEGFKPYY--VTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRM-LREELQLLQ 129
D A+ + G PY + K E+ +A+K +L ++ L A + L + Q++Q
Sbjct: 22 DIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQ 81
Query: 130 E----QGSYVGEVVKP-MDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYT 184
E Q + +++ P + K ++ V KFVV + + D+ RV + Y
Sbjct: 82 EEQPLQVARCTKIINPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQ 141
Query: 185 LHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQ 244
+ LP K+DP V++M VE+ PD TY VGG QI++++EV+ELP+ HPE F LGI
Sbjct: 142 IQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDP 201
Query: 245 PKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKK 304
PKGVL YGPPGTGKTLLARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 202 PKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKK 261
Query: 305 LAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTM 364
I+F DE+D+IG +R + G GGD+EVQRTM
Sbjct: 262 AC-----------------------------IVFFDEVDAIGGARFDDGVGGDNEVQRTM 292
Query: 365 LELLNQLDGFEA 376
LE++NQLDGF+A
Sbjct: 293 LEIVNQLDGFDA 304
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTLLARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 213 TGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSK 260
>gi|213972598|ref|NP_001093979.1| proteasome (prosome, macropain) 26S subunit, ATPase, 6 [Rattus
norvegicus]
gi|149033503|gb|EDL88301.1| rCG61291 [Rattus norvegicus]
Length = 403
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 118/278 (42%), Positives = 165/278 (59%), Gaps = 29/278 (10%)
Query: 99 EKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFV 158
E + L+ L+ Q EL + +L+ LQ G VGEV+K + ++K +VK ++V
Sbjct: 35 EIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYV 94
Query: 159 VDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDN 218
V + +D + + P RVAL + T+ + LP +VDPLV M E + +Y +GGL
Sbjct: 95 VGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSE 154
Query: 219 QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSG 278
QI+E++EVIELP+ +PELF +GI PKG LLYGPPGTGKTLLARAVA +C F++V
Sbjct: 155 QIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVS 214
Query: 279 SELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIF 338
S +V K+IGE +R++RE+F A R+H P IIF
Sbjct: 215 SSIVDKYIGESARLIREMFNYA-----------------------------RDHQPCIIF 245
Query: 339 MDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
MDEID+IG R G+ D E+QRT++ELLNQ+DGF+
Sbjct: 246 MDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDT 283
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 35/46 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA +C F++V S +V K+IGE +R++RE+F AR
Sbjct: 192 TGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYAR 237
>gi|30583901|gb|AAP36199.1| Homo sapiens proteasome (prosome, macropain) 26S subunit, ATPase, 6
[synthetic construct]
gi|60653563|gb|AAX29475.1| proteasome 26S subunit 6 [synthetic construct]
Length = 390
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 118/278 (42%), Positives = 165/278 (59%), Gaps = 29/278 (10%)
Query: 99 EKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFV 158
E + L+ L+ Q EL + +L+ LQ G VGEV+K + ++K +VK ++V
Sbjct: 21 EIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYV 80
Query: 159 VDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDN 218
V + +D + + P RVAL + T+ + LP +VDPLV M E + +Y +GGL
Sbjct: 81 VGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSE 140
Query: 219 QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSG 278
QI+E++EVIELP+ +PELF +GI PKG LLYGPPGTGKTLLARAVA +C F++V
Sbjct: 141 QIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVS 200
Query: 279 SELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIF 338
S +V K+IGE +R++RE+F A R+H P IIF
Sbjct: 201 SSIVDKYIGESARLIREMFNYA-----------------------------RDHQPCIIF 231
Query: 339 MDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
MDEID+IG R G+ D E+QRT++ELLNQ+DGF+
Sbjct: 232 MDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDT 269
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 35/46 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA +C F++V S +V K+IGE +R++RE+F AR
Sbjct: 178 TGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYAR 223
>gi|195539395|ref|NP_002797.3| 26S protease regulatory subunit 10B [Homo sapiens]
gi|73963837|ref|XP_535701.2| PREDICTED: 26S protease regulatory subunit 10B [Canis lupus
familiaris]
gi|114653051|ref|XP_001159476.1| PREDICTED: 26S protease regulatory subunit 10B isoform 2 [Pan
troglodytes]
gi|291403875|ref|XP_002718294.1| PREDICTED: proteasome 26S ATPase subunit 6 [Oryctolagus cuniculus]
gi|296215034|ref|XP_002753956.1| PREDICTED: 26S protease regulatory subunit 10B [Callithrix jacchus]
gi|297695107|ref|XP_002824794.1| PREDICTED: 26S protease regulatory subunit 10B [Pongo abelii]
gi|332237110|ref|XP_003267746.1| PREDICTED: 26S protease regulatory subunit 10B [Nomascus
leucogenys]
gi|344273723|ref|XP_003408668.1| PREDICTED: 26S protease regulatory subunit 10B-like [Loxodonta
africana]
gi|348572189|ref|XP_003471876.1| PREDICTED: 26S protease regulatory subunit 10B-like [Cavia
porcellus]
gi|397523475|ref|XP_003831757.1| PREDICTED: 26S protease regulatory subunit 10B [Pan paniscus]
gi|410962256|ref|XP_003987690.1| PREDICTED: 26S protease regulatory subunit 10B [Felis catus]
gi|426232518|ref|XP_004010269.1| PREDICTED: 26S protease regulatory subunit 10B [Ovis aries]
gi|426376918|ref|XP_004055227.1| PREDICTED: 26S protease regulatory subunit 10B-like [Gorilla
gorilla gorilla]
gi|351707287|gb|EHB10206.1| 26S protease regulatory subunit S10B [Heterocephalus glaber]
gi|380814880|gb|AFE79314.1| 26S protease regulatory subunit 10B [Macaca mulatta]
gi|410216102|gb|JAA05270.1| proteasome (prosome, macropain) 26S subunit, ATPase, 6 [Pan
troglodytes]
gi|410290648|gb|JAA23924.1| proteasome (prosome, macropain) 26S subunit, ATPase, 6 [Pan
troglodytes]
gi|417400316|gb|JAA47112.1| Putative 26s protease regulatory subunit s10b-like protein
[Desmodus rotundus]
gi|431895846|gb|ELK05264.1| 26S protease regulatory subunit S10B [Pteropus alecto]
Length = 403
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 118/278 (42%), Positives = 165/278 (59%), Gaps = 29/278 (10%)
Query: 99 EKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFV 158
E + L+ L+ Q EL + +L+ LQ G VGEV+K + ++K +VK ++V
Sbjct: 35 EIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYV 94
Query: 159 VDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDN 218
V + +D + + P RVAL + T+ + LP +VDPLV M E + +Y +GGL
Sbjct: 95 VGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSE 154
Query: 219 QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSG 278
QI+E++EVIELP+ +PELF +GI PKG LLYGPPGTGKTLLARAVA +C F++V
Sbjct: 155 QIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVS 214
Query: 279 SELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIF 338
S +V K+IGE +R++RE+F A R+H P IIF
Sbjct: 215 SSIVDKYIGESARLIREMFNYA-----------------------------RDHQPCIIF 245
Query: 339 MDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
MDEID+IG R G+ D E+QRT++ELLNQ+DGF+
Sbjct: 246 MDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDT 283
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 35/46 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA +C F++V S +V K+IGE +R++RE+F AR
Sbjct: 192 TGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYAR 237
>gi|334310858|ref|XP_001365047.2| PREDICTED: 26S protease regulatory subunit 10B-like [Monodelphis
domestica]
Length = 403
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 118/278 (42%), Positives = 165/278 (59%), Gaps = 29/278 (10%)
Query: 99 EKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFV 158
E + L+ L+ Q EL + +L+ LQ G VGEV+K + ++K +VK ++V
Sbjct: 35 EIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYV 94
Query: 159 VDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDN 218
V + +D + + P RVAL + T+ + LP +VDPLV M E + +Y +GGL
Sbjct: 95 VGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSE 154
Query: 219 QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSG 278
QI+E++EVIELP+ +PELF +GI PKG LLYGPPGTGKTLLARAVA +C F++V
Sbjct: 155 QIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVS 214
Query: 279 SELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIF 338
S +V K+IGE +R++RE+F A R+H P IIF
Sbjct: 215 SSIVDKYIGESARLIREMFNYA-----------------------------RDHQPCIIF 245
Query: 339 MDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
MDEID+IG R G+ D E+QRT++ELLNQ+DGF+
Sbjct: 246 MDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDT 283
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 35/46 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA +C F++V S +V K+IGE +R++RE+F AR
Sbjct: 192 TGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYAR 237
>gi|395838570|ref|XP_003792186.1| PREDICTED: 26S protease regulatory subunit 10B [Otolemur garnettii]
Length = 403
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 118/278 (42%), Positives = 165/278 (59%), Gaps = 29/278 (10%)
Query: 99 EKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFV 158
E + L+ L+ Q EL + +L+ LQ G VGEV+K + ++K +VK ++V
Sbjct: 35 EIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYV 94
Query: 159 VDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDN 218
V + +D + + P RVAL + T+ + LP +VDPLV M E + +Y +GGL
Sbjct: 95 VGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSE 154
Query: 219 QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSG 278
QI+E++EVIELP+ +PELF +GI PKG LLYGPPGTGKTLLARAVA +C F++V
Sbjct: 155 QIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVS 214
Query: 279 SELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIF 338
S +V K+IGE +R++RE+F A R+H P IIF
Sbjct: 215 SSIVDKYIGESARLIREMFNYA-----------------------------RDHQPCIIF 245
Query: 339 MDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
MDEID+IG R G+ D E+QRT++ELLNQ+DGF+
Sbjct: 246 MDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDT 283
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 35/46 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA +C F++V S +V K+IGE +R++RE+F AR
Sbjct: 192 TGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYAR 237
>gi|335280279|ref|XP_001928782.2| PREDICTED: 26S protease regulatory subunit 10B [Sus scrofa]
Length = 403
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 118/278 (42%), Positives = 165/278 (59%), Gaps = 29/278 (10%)
Query: 99 EKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFV 158
E + L+ L+ Q EL + +L+ LQ G VGEV+K + ++K +VK ++V
Sbjct: 35 EIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYV 94
Query: 159 VDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDN 218
V + +D + + P RVAL + T+ + LP +VDPLV M E + +Y +GGL
Sbjct: 95 VGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSE 154
Query: 219 QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSG 278
QI+E++EVIELP+ +PELF +GI PKG LLYGPPGTGKTLLARAVA +C F++V
Sbjct: 155 QIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVS 214
Query: 279 SELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIF 338
S +V K+IGE +R++RE+F A R+H P IIF
Sbjct: 215 SSIVDKYIGESARLIREMFNYA-----------------------------RDHQPCIIF 245
Query: 339 MDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
MDEID+IG R G+ D E+QRT++ELLNQ+DGF+
Sbjct: 246 MDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDT 283
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 35/46 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA +C F++V S +V K+IGE +R++RE+F AR
Sbjct: 192 TGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYAR 237
>gi|363807752|ref|NP_001242685.1| uncharacterized protein LOC100796358 [Glycine max]
gi|255639927|gb|ACU20256.1| unknown [Glycine max]
Length = 426
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 132/312 (42%), Positives = 181/312 (58%), Gaps = 37/312 (11%)
Query: 73 DEAIKSSEGFKPYY--VTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRM-LREELQLLQ 129
D A+ + G PY + K E+ +A+K +L ++ L A + L + Q++Q
Sbjct: 22 DIALLKTYGLGPYSTSIKKAEKEIKEMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQ 81
Query: 130 E----QGSYVGEVVKP-MDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYT 184
E Q + +++ P + K ++ V KFVV + + D+ RV + Y
Sbjct: 82 EEQPLQVARCTKIINPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQ 141
Query: 185 LHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQ 244
+ LP K+DP V++M VE+ PD TY VGG QI++++EV+ELP+ HPE F LGI
Sbjct: 142 IQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDP 201
Query: 245 PKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKK 304
PKGVL YGPPGTGKTLLARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 202 PKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKK 261
Query: 305 LAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTM 364
I+F DE+D+IG +R + G GGD+EVQRTM
Sbjct: 262 AC-----------------------------IVFFDEVDAIGGARFDDGVGGDNEVQRTM 292
Query: 365 LELLNQLDGFEA 376
LE++NQLDGF+A
Sbjct: 293 LEIVNQLDGFDA 304
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTLLARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 213 TGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSK 260
>gi|448312904|ref|ZP_21502637.1| proteasome-activating nucleotidase [Natronolimnobius
innermongolicus JCM 12255]
gi|445600022|gb|ELY54042.1| proteasome-activating nucleotidase [Natronolimnobius
innermongolicus JCM 12255]
Length = 410
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 118/277 (42%), Positives = 172/277 (62%), Gaps = 32/277 (11%)
Query: 101 EQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVV- 159
EQ L + +R L +V + E + L+ Y+ V MD ++V+VK H + V+
Sbjct: 43 EQQLEEAEDRRQRLRERVDRIERENETLKSSSLYIATVEDVMDGEEVVVKQHGNNQEVLT 102
Query: 160 DIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQ 219
++ I ++ V P RVA+ N+S+ + +L + D M + + P+ TY +GG+D Q
Sbjct: 103 EVSPRI-VDQVEPGDRVAV-NDSFAIQTVLNAETDARAQSMEITERPEVTYGEIGGIDEQ 160
Query: 220 IKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGS 279
++E++E +E P+ PELFD +GI P GVLLYGPPGTGKT+LA+AVAH T+ TFI+++GS
Sbjct: 161 VREVREAVEQPLAEPELFDEVGIEPPSGVLLYGPPGTGKTMLAKAVAHETDATFIKMAGS 220
Query: 280 ELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFM 339
ELV+KFIGEGSR+VR+LF MA RE P+IIF+
Sbjct: 221 ELVRKFIGEGSRLVRDLFEMA-----------------------------REREPAIIFI 251
Query: 340 DEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
DEID+I + R ES + GD+EVQRTM++LL+++DGFEA
Sbjct: 252 DEIDAIATRRSESKTSGDAEVQRTMMQLLSEMDGFEA 288
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 44/48 (91%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKT+LA+AVAH T+ TFI+++GSELV+KFIGEGSR+VR+LF MAR +
Sbjct: 197 TGKTMLAKAVAHETDATFIKMAGSELVRKFIGEGSRLVRDLFEMARER 244
>gi|28175479|gb|AAH43044.1| Psmc6 protein [Mus musculus]
Length = 390
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 118/278 (42%), Positives = 165/278 (59%), Gaps = 29/278 (10%)
Query: 99 EKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFV 158
E + L+ L+ Q EL + +L+ LQ G VGEV+K + ++K +VK ++V
Sbjct: 22 EIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYV 81
Query: 159 VDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDN 218
V + +D + + P RVAL + T+ + LP +VDPLV M E + +Y +GGL
Sbjct: 82 VGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSE 141
Query: 219 QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSG 278
QI+E++EVIELP+ +PELF +GI PKG LLYGPPGTGKTLLARAVA +C F++V
Sbjct: 142 QIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVS 201
Query: 279 SELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIF 338
S +V K+IGE +R++RE+F A R+H P IIF
Sbjct: 202 SSIVDKYIGESARLIREMFNYA-----------------------------RDHQPCIIF 232
Query: 339 MDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
MDEID+IG R G+ D E+QRT++ELLNQ+DGF+
Sbjct: 233 MDEIDAIGGPRFSEGTSADREIQRTLMELLNQMDGFDT 270
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 35/46 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA +C F++V S +V K+IGE +R++RE+F AR
Sbjct: 179 TGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYAR 224
>gi|333910700|ref|YP_004484433.1| proteasome-activating nucleotidase [Methanotorris igneus Kol 5]
gi|333751289|gb|AEF96368.1| Proteasome-activating nucleotidase [Methanotorris igneus Kol 5]
Length = 407
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 118/287 (41%), Positives = 181/287 (63%), Gaps = 36/287 (12%)
Query: 97 VAEKEQNLRRLQAQRNELN-------AKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLV 149
+AE E L R++ ++ +L + +L+ EL L+ +G V++ + +KV+V
Sbjct: 27 IAELESKLLRMEMEKRDLERENLQLIKENEILKRELDRLRVPPLIIGTVIEKVSDRKVIV 86
Query: 150 KVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDST 209
K F+V++ + ++ +D+TP RV L ++ ++ +LP + D M V++ P +
Sbjct: 87 KSSTGPHFLVNVSQFVNPDDLTPGTRVCLNQQTLSVVDVLPKEKDLRAMAMEVDERPKVS 146
Query: 210 YEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 269
+ +GGL QI+EIKEV+ELP+KHPELF+ +GI PKGVLLYGPPGTGKTLLA+AVA T
Sbjct: 147 FSDIGGLAKQIQEIKEVVELPLKHPELFEKVGIEPPKGVLLYGPPGTGKTLLAKAVAAET 206
Query: 270 ECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNF 329
TFI++ GSELV+KFIGEG+++VR++F +A
Sbjct: 207 NATFIKIVGSELVKKFIGEGAKLVRDVFKLA----------------------------- 237
Query: 330 REHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
+E APSIIF+DEID++ + R E+ +GGD EVQRT+++LL ++DGF+A
Sbjct: 238 KEKAPSIIFIDEIDAVAAKRTEALTGGDREVQRTLMQLLAEMDGFDA 284
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 42/51 (82%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
+GKTLLA+AVA T TFI++ GSELV+KFIGEG+++VR++F +A+ K S
Sbjct: 193 TGKTLLAKAVAAETNATFIKIVGSELVKKFIGEGAKLVRDVFKLAKEKAPS 243
>gi|145234069|ref|XP_001400407.1| 26S protease regulatory subunit 7 [Aspergillus niger CBS 513.88]
gi|134057348|emb|CAK44546.1| unnamed protein product [Aspergillus niger]
gi|350635114|gb|EHA23476.1| hypothetical protein ASPNIDRAFT_52442 [Aspergillus niger ATCC 1015]
gi|358367742|dbj|GAA84360.1| 26S protease regulatory subunit 7 [Aspergillus kawachii IFO 4308]
Length = 439
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 117/237 (49%), Positives = 149/237 (62%), Gaps = 29/237 (12%)
Query: 140 KPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSL 199
K DK K ++ V KFVV++ + + D+ RV + Y + LP K+DP V++
Sbjct: 110 KDSDKSKYVINVKQIAKFVVNLGERVSPTDIEEGMRVGVDRNKYQIMLPLPPKIDPSVTM 169
Query: 200 MMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKT 259
M VE PD TY VGG QI++++EV+E+P+ PE F LGI PKG LLYGPPGTGKT
Sbjct: 170 MTVEDKPDVTYGDVGGCKEQIEKLREVVEMPLLSPERFVNLGIDPPKGALLYGPPGTGKT 229
Query: 260 LLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLT 319
L ARAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 230 LCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKK--------------- 274
Query: 320 ILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
C IIF DEID++G +R + G+GGD+EVQRTMLEL+ QLDGF+A
Sbjct: 275 ------AC--------IIFFDEIDAVGGARFDDGAGGDNEVQRTMLELITQLDGFDA 317
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 226 TGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTK 273
>gi|242023637|ref|XP_002432238.1| 26S protease regulatory subunit, putative [Pediculus humanus
corporis]
gi|212517640|gb|EEB19500.1| 26S protease regulatory subunit, putative [Pediculus humanus
corporis]
Length = 426
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 116/233 (49%), Positives = 148/233 (63%), Gaps = 29/233 (12%)
Query: 143 DKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMV 202
D K ++ V KFVVD+ ++ D+ RV + Y +H LP K+DP V++M V
Sbjct: 100 DNPKYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQV 159
Query: 203 EKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 262
E+ PD TY +GG QI++++EV+E P+ HPE F LGI PKGVLL+GPPGTGKTL A
Sbjct: 160 EEKPDVTYSDIGGCKEQIEKLREVVETPLLHPEKFVNLGIEPPKGVLLFGPPGTGKTLCA 219
Query: 263 RAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILT 322
RAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 220 RAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARSKK------------------ 261
Query: 323 NTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C +IF DEID+IG +R + GSGG +EVQRTMLEL+NQLDGF+
Sbjct: 262 ---AC--------VIFFDEIDAIGGARFDDGSGGVNEVQRTMLELINQLDGFD 303
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 213 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARSK 260
>gi|115385026|ref|XP_001209060.1| 26S protease regulatory subunit 7 [Aspergillus terreus NIH2624]
gi|114196752|gb|EAU38452.1| 26S protease regulatory subunit 7 [Aspergillus terreus NIH2624]
Length = 439
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 117/237 (49%), Positives = 149/237 (62%), Gaps = 29/237 (12%)
Query: 140 KPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSL 199
K DK K ++ V KFVV++ + + D+ RV + Y + LP K+DP V++
Sbjct: 110 KDSDKSKYVINVKQIAKFVVNLGERVSPTDIEEGMRVGVDRNKYQIMLPLPPKIDPSVTM 169
Query: 200 MMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKT 259
M VE PD TY VGG QI++++EV+E+P+ PE F LGI PKG LLYGPPGTGKT
Sbjct: 170 MTVEDKPDVTYGDVGGCKEQIEKLREVVEMPLLSPERFVNLGIDPPKGALLYGPPGTGKT 229
Query: 260 LLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLT 319
L ARAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 230 LCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKK--------------- 274
Query: 320 ILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
C IIF DEID++G +R + G+GGD+EVQRTMLEL+ QLDGF+A
Sbjct: 275 ------AC--------IIFFDEIDAVGGARFDDGAGGDNEVQRTMLELITQLDGFDA 317
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 226 TGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTK 273
>gi|169780544|ref|XP_001824736.1| 26S protease regulatory subunit 7 [Aspergillus oryzae RIB40]
gi|238505286|ref|XP_002383872.1| proteasome regulatory particle subunit Rpt1, putative [Aspergillus
flavus NRRL3357]
gi|83773476|dbj|BAE63603.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220689986|gb|EED46336.1| proteasome regulatory particle subunit Rpt1, putative [Aspergillus
flavus NRRL3357]
gi|391872042|gb|EIT81185.1| 26S proteasome regulatory complex, ATPase RPT1 [Aspergillus oryzae
3.042]
Length = 439
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 117/237 (49%), Positives = 149/237 (62%), Gaps = 29/237 (12%)
Query: 140 KPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSL 199
K DK K ++ V KFVV++ + + D+ RV + Y + LP K+DP V++
Sbjct: 110 KDSDKSKYVINVKQIAKFVVNLGERVSPTDIEEGMRVGVDRNKYQIMLPLPPKIDPSVTM 169
Query: 200 MMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKT 259
M VE PD TY VGG QI++++EV+E+P+ PE F LGI PKG LLYGPPGTGKT
Sbjct: 170 MTVEDKPDVTYGDVGGCKEQIEKLREVVEMPLLSPERFVNLGIDPPKGALLYGPPGTGKT 229
Query: 260 LLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLT 319
L ARAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 230 LCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKK--------------- 274
Query: 320 ILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
C IIF DEID++G +R + G+GGD+EVQRTMLEL+ QLDGF+A
Sbjct: 275 ------AC--------IIFFDEIDAVGGARFDDGAGGDNEVQRTMLELITQLDGFDA 317
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 226 TGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTK 273
>gi|289192286|ref|YP_003458227.1| 26S proteasome subunit P45 family [Methanocaldococcus sp. FS406-22]
gi|288938736|gb|ADC69491.1| 26S proteasome subunit P45 family [Methanocaldococcus sp. FS406-22]
Length = 430
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 116/257 (45%), Positives = 165/257 (64%), Gaps = 29/257 (11%)
Query: 120 MLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALR 179
+LR EL ++ VG VV + ++KV+VK F+V++ ++ D+ P RV L
Sbjct: 79 ILRRELDRMRVPPLIVGTVVDKVGERKVVVKSSTGPSFLVNVSHFVNPEDLAPGKRVCLN 138
Query: 180 NESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDA 239
++ T+ +LP D M V++ P+ YE +GGLD QI+EI+EV+ELP+KHPELF+
Sbjct: 139 QQTLTVVDVLPENKDYRAKAMEVDERPNVRYEDIGGLDKQIQEIREVVELPLKHPELFEK 198
Query: 240 LGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVM 299
+GI PKG+LLYGPPGTGKTLLA+AVA T TFIRV GSELV+KFIGEG+ +V+++F +
Sbjct: 199 VGIEPPKGILLYGPPGTGKTLLAKAVATETNATFIRVVGSELVKKFIGEGASLVKDIFKL 258
Query: 300 ASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSE 359
A +E APSIIF+DEID+I + R ++ +GGD E
Sbjct: 259 A-----------------------------KEKAPSIIFIDEIDAIAAKRTDALTGGDRE 289
Query: 360 VQRTMLELLNQLDGFEA 376
VQRT+++LL ++DGF+A
Sbjct: 290 VQRTLMQLLAEMDGFDA 306
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 41/51 (80%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
+GKTLLA+AVA T TFIRV GSELV+KFIGEG+ +V+++F +A+ K S
Sbjct: 215 TGKTLLAKAVATETNATFIRVVGSELVKKFIGEGASLVKDIFKLAKEKAPS 265
>gi|297297860|ref|XP_001082028.2| PREDICTED: 26S protease regulatory subunit S10B-like [Macaca
mulatta]
Length = 409
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 117/278 (42%), Positives = 164/278 (58%), Gaps = 29/278 (10%)
Query: 99 EKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFV 158
E + L+ L+ Q EL + +L+ LQ G VGEV+K + +K +VK ++V
Sbjct: 41 EIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTAEKFIVKATNGPRYV 100
Query: 159 VDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDN 218
V + +D + + P RVAL + T+ + LP +VDPLV M E + +Y +GGL
Sbjct: 101 VGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVCNMSHEDPGNVSYSEIGGLSE 160
Query: 219 QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSG 278
QI+E++EVIELP+ +PELF +GI PKG LLYGPPGTGKTLLARAVA +C F++V
Sbjct: 161 QIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVS 220
Query: 279 SELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIF 338
S +V K+IGE +R++RE+F A R+H P IIF
Sbjct: 221 SSIVDKYIGESARLIREMFNYA-----------------------------RDHQPCIIF 251
Query: 339 MDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
MDEID+IG R G+ D E+QRT+++LLNQ+DGF+
Sbjct: 252 MDEIDAIGGRRFSEGTSADREIQRTLMDLLNQMDGFDT 289
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 35/46 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA +C F++V S +V K+IGE +R++RE+F AR
Sbjct: 198 TGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYAR 243
>gi|91086399|ref|XP_974859.1| PREDICTED: similar to 26S protease regulatory subunit 4 [Tribolium
castaneum]
gi|270010293|gb|EFA06741.1| hypothetical protein TcasGA2_TC009675 [Tribolium castaneum]
Length = 438
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 119/288 (41%), Positives = 176/288 (61%), Gaps = 33/288 (11%)
Query: 89 KIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVL 148
+I++ L+ E +N RL+ Q + + R ++ L+ VG + + +D +
Sbjct: 65 RIKDYLLMEEEFIRNQERLKPQEEKNEEE----RSKVDDLRGTPMSVGNLEEIIDDNHAI 120
Query: 149 VKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDS 208
V + V I +D + + P C V L ++ + + +L + DP+V++M +EK P
Sbjct: 121 VSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLGDDTDPMVTVMKLEKAPQE 180
Query: 209 TYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH 268
TY +GGLD QI+EIKE +ELP+ HPE ++ +GI PKGV+LYGPPGTGKTLLA+AVA+
Sbjct: 181 TYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQ 240
Query: 269 TECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCN 328
T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 241 TSATFLRVVGSELIQKYLGDGPKLVRELFRVAE--------------------------- 273
Query: 329 FREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
EHAPSI+F+DEID++G+ R +S SGG+ E+QRTMLELLNQLDGF++
Sbjct: 274 --EHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDS 319
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 228 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 272
>gi|51467888|ref|NP_001003832.1| 26S protease regulatory subunit S10B [Danio rerio]
gi|49619121|gb|AAT68145.1| 26S protease regulatory subunit S10B [Danio rerio]
gi|54035446|gb|AAH83283.1| Proteasome (prosome, macropain) 26S subunit, ATPase, 6 [Danio
rerio]
gi|94734053|emb|CAK10966.1| proteasome (prosome, macropain) 26S subunit, ATPase, 6 [Danio
rerio]
gi|156230928|gb|AAI52261.1| Proteasome (prosome, macropain) 26S subunit, ATPase, 6 [Danio
rerio]
gi|161611577|gb|AAI55770.1| Proteasome (prosome, macropain) 26S subunit, ATPase, 6 [Danio
rerio]
gi|182890938|gb|AAI65828.1| Psmc6 protein [Danio rerio]
Length = 389
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 118/278 (42%), Positives = 164/278 (58%), Gaps = 29/278 (10%)
Query: 99 EKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFV 158
E + L+ L+ Q EL + +L+ LQ G VGEV+K + ++K +VK ++V
Sbjct: 21 EIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYV 80
Query: 159 VDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDN 218
V + +D + + P RVAL + T+ + LP +VDPLV M E +Y +GGL
Sbjct: 81 VGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGSVSYSEIGGLSE 140
Query: 219 QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSG 278
QI+E++EVIELP+ +PELF +GI PKG LLYGPPGTGKTLLARAVA +C F++V
Sbjct: 141 QIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVS 200
Query: 279 SELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIF 338
S +V K+IGE +R++RE+F A R+H P IIF
Sbjct: 201 SSIVDKYIGESARLIREMFNYA-----------------------------RDHQPCIIF 231
Query: 339 MDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
MDEID+IG R G+ D E+QRT++ELLNQ+DGF+
Sbjct: 232 MDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDT 269
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 35/46 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA +C F++V S +V K+IGE +R++RE+F AR
Sbjct: 178 TGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYAR 223
>gi|403278020|ref|XP_003930633.1| PREDICTED: 26S protease regulatory subunit 10B [Saimiri boliviensis
boliviensis]
Length = 428
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 118/277 (42%), Positives = 165/277 (59%), Gaps = 29/277 (10%)
Query: 99 EKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFV 158
E + L+ L+ Q EL + +L+ LQ G VGEV+K + ++K +VK ++V
Sbjct: 35 EIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYV 94
Query: 159 VDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDN 218
V + +D + + P RVAL + T+ + LP +VDPLV M E + +Y +GGL
Sbjct: 95 VGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSE 154
Query: 219 QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSG 278
QI+E++EVIELP+ +PELF +GI PKG LLYGPPGTGKTLLARAVA +C F++V
Sbjct: 155 QIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVS 214
Query: 279 SELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIF 338
S +V K+IGE +R++RE+F A R+H P IIF
Sbjct: 215 SSIVDKYIGESARLIREMFNYA-----------------------------RDHQPCIIF 245
Query: 339 MDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
MDEID+IG R G+ D E+QRT++ELLNQ+DGF+
Sbjct: 246 MDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFD 282
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 35/46 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA +C F++V S +V K+IGE +R++RE+F AR
Sbjct: 192 TGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYAR 237
>gi|380025926|ref|XP_003696714.1| PREDICTED: 26S protease regulatory subunit 4-like [Apis florea]
Length = 440
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 119/288 (41%), Positives = 176/288 (61%), Gaps = 33/288 (11%)
Query: 89 KIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVL 148
+I++ L+ E +N RL+ Q + + R ++ L+ VG + + +D +
Sbjct: 67 RIKDYLLMEEEFIRNQERLKPQEEKNEEE----RSKVDDLRGTPMSVGTLEEIIDDNHAI 122
Query: 149 VKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDS 208
V + V I +D + + P C V L ++ + + +L + DP+V++M +EK P
Sbjct: 123 VSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLGDDTDPMVTVMKLEKAPQE 182
Query: 209 TYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH 268
TY +GGLD QI+EIKE +ELP+ HPE ++ +GI PKGV+LYGPPGTGKTLLA+AVA+
Sbjct: 183 TYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQ 242
Query: 269 TECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCN 328
T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 243 TSATFLRVVGSELIQKYLGDGPKLVRELFRVAE--------------------------- 275
Query: 329 FREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
EHAPSI+F+DEID++G+ R +S SGG+ E+QRTMLELLNQLDGF++
Sbjct: 276 --EHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDS 321
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 230 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 274
>gi|303321742|ref|XP_003070865.1| 26S protease regulatory subunit, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|240110562|gb|EER28720.1| 26S protease regulatory subunit, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|320040354|gb|EFW22287.1| 26S protease regulatory subunit 7 [Coccidioides posadasii str.
Silveira]
gi|392862229|gb|EAS37145.2| 26S protease regulatory subunit 7 [Coccidioides immitis RS]
Length = 439
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 117/237 (49%), Positives = 149/237 (62%), Gaps = 29/237 (12%)
Query: 140 KPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSL 199
K DK K ++ V KFVV++ + + D+ RV + Y + LP K+DP V++
Sbjct: 110 KDPDKSKYVINVKQIAKFVVNLGERVSPTDIEEGMRVGVDRNKYQILLPLPPKIDPSVTM 169
Query: 200 MMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKT 259
M VE PD TY +GG QI++++EV+E+P+ PE F LGI PKG LLYGPPGTGKT
Sbjct: 170 MTVEDKPDVTYGDIGGCKEQIEKLREVVEMPLLSPERFVGLGIDPPKGALLYGPPGTGKT 229
Query: 260 LLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLT 319
L ARAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 230 LCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKK--------------- 274
Query: 320 ILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
C IIF DEID+IG +R + G+GGD+EVQRTMLEL+ QLDGF+A
Sbjct: 275 ------AC--------IIFFDEIDAIGGARFDDGAGGDNEVQRTMLELITQLDGFDA 317
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 226 TGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTK 273
>gi|367042920|ref|XP_003651840.1| hypothetical protein THITE_2112577 [Thielavia terrestris NRRL 8126]
gi|346999102|gb|AEO65504.1| hypothetical protein THITE_2112577 [Thielavia terrestris NRRL 8126]
Length = 391
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 118/277 (42%), Positives = 167/277 (60%), Gaps = 29/277 (10%)
Query: 99 EKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFV 158
E E L+ L+ + +L K E ++ LQ G +GEV+K +D ++ +VK ++V
Sbjct: 23 EWETKLKNLRLEIKDLQKKYDETEENIKALQSVGQIIGEVLKQLDDERFIVKASSGPRYV 82
Query: 159 VDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDN 218
V +D + + RVAL + T+ ++LP +VDPLV M +E ++ +GGL++
Sbjct: 83 VGCRSKVDKSKLKQGTRVALDMTTLTIMRMLPREVDPLVYNMSLEDPGQVSFAGIGGLND 142
Query: 219 QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSG 278
QI+E++EVIELP+K+PELF +GI PKGVLLYGPPGTGKTLLARAVA E F++V
Sbjct: 143 QIRELREVIELPLKNPELFMRVGIKPPKGVLLYGPPGTGKTLLARAVASSLETNFLKVVS 202
Query: 279 SELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIF 338
S +V K+IGE +R++RE+F A +EH P IIF
Sbjct: 203 SAIVDKYIGESARLIREMFGYA-----------------------------KEHEPCIIF 233
Query: 339 MDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
MDEID+IG R G+ D E+QRT++ELLNQLDGF+
Sbjct: 234 MDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFD 270
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 34/46 (73%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA E F++V S +V K+IGE +R++RE+F A+
Sbjct: 180 TGKTLLARAVASSLETNFLKVVSSAIVDKYIGESARLIREMFGYAK 225
>gi|24745880|dbj|BAC23035.1| 26S proteasome AAA-ATPase subunit RPT4a [Solanum tuberosum]
gi|76160929|gb|ABA40428.1| 26S proteasome AAA-ATPase subunit RPT4a-like protein [Solanum
tuberosum]
Length = 398
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 117/287 (40%), Positives = 170/287 (59%), Gaps = 43/287 (14%)
Query: 103 NLRRLQAQRNELNAKVRMLRE--------------ELQLLQEQGSYVGEVVKPMDKKKVL 148
+ R+ Q EL+A+VR +RE +L+ LQ G +GEV++P+D ++++
Sbjct: 16 DYRKKLLQHKELDARVRTVRENLRATKKEYAKTEDDLKSLQSVGQIIGEVLRPLDNERLI 75
Query: 149 VKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDS 208
VK ++VV +D +T RV L + T+ + LP +VDP+V M+ E +
Sbjct: 76 VKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNI 135
Query: 209 TYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH 268
+Y VGGL +QI+E++E IELP+ +PELF +GI PKGVLLYGPPGTGKTLLARA+A +
Sbjct: 136 SYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASN 195
Query: 269 TECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCN 328
+ F++V S ++ K+IGE +R++RE+F A
Sbjct: 196 IDANFLKVVSSAIIDKYIGESARLIREMFNYA---------------------------- 227
Query: 329 FREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
R+H P IIFMDEID+IG R G+ D E+QRT++ELLNQLDGF+
Sbjct: 228 -RDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFD 273
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 35/46 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARA+A + + F++V S ++ K+IGE +R++RE+F AR
Sbjct: 183 TGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAR 228
>gi|66509032|ref|XP_623527.1| PREDICTED: 26S protease regulatory subunit 4 isoform 1 [Apis
mellifera]
Length = 440
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 119/288 (41%), Positives = 176/288 (61%), Gaps = 33/288 (11%)
Query: 89 KIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVL 148
+I++ L+ E +N RL+ Q + + R ++ L+ VG + + +D +
Sbjct: 67 RIKDYLLMEEEFIRNQERLKPQEEKNEEE----RSKVDDLRGTPMSVGTLEEIIDDNHAI 122
Query: 149 VKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDS 208
V + V I +D + + P C V L ++ + + +L + DP+V++M +EK P
Sbjct: 123 VSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLGDDTDPMVTVMKLEKAPQE 182
Query: 209 TYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH 268
TY +GGLD QI+EIKE +ELP+ HPE ++ +GI PKGV+LYGPPGTGKTLLA+AVA+
Sbjct: 183 TYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQ 242
Query: 269 TECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCN 328
T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 243 TSATFLRVVGSELIQKYLGDGPKLVRELFRVAE--------------------------- 275
Query: 329 FREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
EHAPSI+F+DEID++G+ R +S SGG+ E+QRTMLELLNQLDGF++
Sbjct: 276 --EHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDS 321
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 230 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 274
>gi|297297857|ref|XP_001099493.2| PREDICTED: 26S protease regulatory subunit S10B-like, partial
[Macaca mulatta]
Length = 352
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 118/278 (42%), Positives = 165/278 (59%), Gaps = 29/278 (10%)
Query: 99 EKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFV 158
E + L+ L+ Q EL + +L+ LQ G VGEV+K + ++K +VK ++V
Sbjct: 35 EIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYV 94
Query: 159 VDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDN 218
V + +D + + P RVAL + T+ + LP +VDPLV M E + +Y +GGL
Sbjct: 95 VGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSE 154
Query: 219 QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSG 278
QI+E++EVIELP+ +PELF +GI PKG LLYGPPGTGKTLLARAVA +C F++V
Sbjct: 155 QIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVS 214
Query: 279 SELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIF 338
S +V K+IGE +R++RE+F A R+H P IIF
Sbjct: 215 SSIVDKYIGESARLIREMFNYA-----------------------------RDHQPCIIF 245
Query: 339 MDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
MDEID+IG R G+ D E+QRT++ELLNQ+DGF+
Sbjct: 246 MDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDT 283
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 35/46 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA +C F++V S +V K+IGE +R++RE+F AR
Sbjct: 192 TGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYAR 237
>gi|225441955|ref|XP_002263826.1| PREDICTED: 26S protease regulatory subunit 7 [Vitis vinifera]
gi|297742918|emb|CBI35785.3| unnamed protein product [Vitis vinifera]
Length = 426
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 132/312 (42%), Positives = 181/312 (58%), Gaps = 37/312 (11%)
Query: 73 DEAIKSSEGFKPYY--VTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRM-LREELQLLQ 129
D A+ + G PY + K E+ +A+K +L ++ L A + L + Q++Q
Sbjct: 22 DIALLKTYGLGPYSAPIKKTEKEIKEMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQ 81
Query: 130 E----QGSYVGEVVKP-MDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYT 184
E Q + +++ P + K ++ V KFVV + + D+ RV + Y
Sbjct: 82 EEQPLQVARCTKIISPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQ 141
Query: 185 LHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQ 244
+ LP K+DP V++M VE+ PD TY VGG QI++++EV+ELP+ HPE F LGI
Sbjct: 142 IQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDP 201
Query: 245 PKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKK 304
PKGVL YGPPGTGKTLLARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 202 PKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKK 261
Query: 305 LAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTM 364
I+F DE+D+IG +R + G GGD+EVQRTM
Sbjct: 262 AC-----------------------------IVFFDEVDAIGGARFDDGVGGDNEVQRTM 292
Query: 365 LELLNQLDGFEA 376
LE++NQLDGF+A
Sbjct: 293 LEIVNQLDGFDA 304
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTLLARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 213 TGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSK 260
>gi|340714610|ref|XP_003395819.1| PREDICTED: 26S protease regulatory subunit 4-like [Bombus
terrestris]
gi|350410918|ref|XP_003489177.1| PREDICTED: 26S protease regulatory subunit 4-like [Bombus
impatiens]
Length = 440
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 119/288 (41%), Positives = 176/288 (61%), Gaps = 33/288 (11%)
Query: 89 KIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVL 148
+I++ L+ E +N RL+ Q + + R ++ L+ VG + + +D +
Sbjct: 67 RIKDYLLMEEEFIRNQERLKPQEEKNEEE----RSKVDDLRGTPMSVGTLEEIIDDNHAI 122
Query: 149 VKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDS 208
V + V I +D + + P C V L ++ + + +L + DP+V++M +EK P
Sbjct: 123 VSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLGDDTDPMVTVMKLEKAPQE 182
Query: 209 TYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH 268
TY +GGLD QI+EIKE +ELP+ HPE ++ +GI PKGV+LYGPPGTGKTLLA+AVA+
Sbjct: 183 TYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQ 242
Query: 269 TECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCN 328
T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 243 TSATFLRVVGSELIQKYLGDGPKLVRELFRVAE--------------------------- 275
Query: 329 FREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
EHAPSI+F+DEID++G+ R +S SGG+ E+QRTMLELLNQLDGF++
Sbjct: 276 --EHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDS 321
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 230 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 274
>gi|332375398|gb|AEE62840.1| unknown [Dendroctonus ponderosae]
Length = 438
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 119/288 (41%), Positives = 176/288 (61%), Gaps = 33/288 (11%)
Query: 89 KIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVL 148
+I++ L+ E +N RL+ Q + + R ++ L+ VG + + +D +
Sbjct: 65 RIKDYLLMEEEFIRNQERLKPQEEKNEEE----RSKVDDLRGTPMSVGNLEEIIDDNHAI 120
Query: 149 VKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDS 208
V + V I +D + + P C V L ++ + + +L + DP+V++M +EK P
Sbjct: 121 VSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLGDDTDPMVTVMKLEKAPQE 180
Query: 209 TYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH 268
TY +GGLD QI+EIKE +ELP+ HPE ++ +GI PKGV+LYGPPGTGKTLLA+AVA+
Sbjct: 181 TYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQ 240
Query: 269 TECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCN 328
T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 241 TSATFLRVVGSELIQKYLGDGPKLVRELFRVAE--------------------------- 273
Query: 329 FREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
EHAPSI+F+DEID++G+ R +S SGG+ E+QRTMLELLNQLDGF++
Sbjct: 274 --EHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDS 319
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 228 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 272
>gi|303273262|ref|XP_003055992.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226462076|gb|EEH59368.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 439
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 114/234 (48%), Positives = 152/234 (64%), Gaps = 29/234 (12%)
Query: 143 DKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMV 202
D+ K ++ V KFVV + +++ D+ RV + Y +H LP K+DP V++M V
Sbjct: 101 DEAKYMINVKQIAKFVVGLGQHVAPTDIEEGMRVGVDRTKYFIHVPLPPKIDPSVTMMTV 160
Query: 203 EKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 262
E+ PD TY VGG +Q+++++EV+ELP+ HPE F LGI PKGVL YGPPGTGKTLLA
Sbjct: 161 EEKPDVTYSDVGGSKDQVEKLREVVELPLLHPEKFVQLGIDPPKGVLCYGPPGTGKTLLA 220
Query: 263 RAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILT 322
RAVA+ T+ FIRV GSELVQK++GEG+R+VRELF +A KK
Sbjct: 221 RAVANRTDACFIRVIGSELVQKYVGEGARLVRELFQLARSKK------------------ 262
Query: 323 NTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
C +IF DE+D+IG +R + G GGD+EVQRTMLE++NQLDGF+A
Sbjct: 263 ---AC--------LIFFDEVDAIGGARFDDGQGGDNEVQRTMLEIVNQLDGFDA 305
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTLLARAVA+ T+ FIRV GSELVQK++GEG+R+VRELF +AR K
Sbjct: 214 TGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARLVRELFQLARSK 261
>gi|294494986|ref|YP_003541479.1| proteasome-activating nucleotidase [Methanohalophilus mahii DSM
5219]
gi|292665985|gb|ADE35834.1| Proteasome-activating nucleotidase [Methanohalophilus mahii DSM
5219]
Length = 429
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 122/306 (39%), Positives = 189/306 (61%), Gaps = 36/306 (11%)
Query: 77 KSSEGFKPYYVTKIEELQLIVAE-KEQ------NLRRLQAQRNELNAKVRMLREELQLLQ 129
+ E F Y + ++++L+ ++ KEQ + +++Q+ + +VR LR E+ L+
Sbjct: 30 EGDEDFSKYLLDRMKQLESRNSKLKEQCDQIESEKKYVESQKVKYEREVRKLRSEINRLK 89
Query: 130 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKIL 189
V ++ +D KVL++ +F+V + + ID + + RVAL ++ ++ +L
Sbjct: 90 TVPLIVANIIDVIDSNKVLIRSSSGPQFMVGVSQYIDDSRLVAGVRVALNQQTLSIVDVL 149
Query: 190 PNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVL 249
P+ +P VS M V + D +YE +GGLDNQI++I E +ELP+ PE F+ +G+ PKGVL
Sbjct: 150 PSTEEPEVSAMEVLESQDISYEDIGGLDNQIQDIIECVELPLIKPESFERVGVEPPKGVL 209
Query: 250 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAH 309
L+GPPGTGKT++A+AVAH T+ TFIRV GSELVQK+IGEGSR+VRE+F MA
Sbjct: 210 LHGPPGTGKTMMAKAVAHRTDATFIRVVGSELVQKYIGEGSRLVREVFDMA--------- 260
Query: 310 HPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN 369
R+ APSIIF+DE+D+I ++R+ +G D EVQRT+++LL
Sbjct: 261 --------------------RKKAPSIIFIDELDAIAATRLSDTNGADREVQRTLMQLLA 300
Query: 370 QLDGFE 375
++DGFE
Sbjct: 301 EMDGFE 306
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/51 (70%), Positives = 44/51 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
+GKT++A+AVAH T+ TFIRV GSELVQK+IGEGSR+VRE+F MAR K S
Sbjct: 216 TGKTMMAKAVAHRTDATFIRVVGSELVQKYIGEGSRLVREVFDMARKKAPS 266
>gi|148234030|ref|NP_001080548.1| proteasome (prosome, macropain) 26S subunit, ATPase, 1 [Xenopus
laevis]
gi|32484378|gb|AAH54287.1| Pros26.4-prov protein [Xenopus laevis]
Length = 440
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 120/276 (43%), Positives = 167/276 (60%), Gaps = 29/276 (10%)
Query: 101 EQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVD 160
E+ R Q Q L K R ++ L+ VG + + +D +V + V
Sbjct: 75 EEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVS 134
Query: 161 IDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQI 220
I +D + + P C V L ++ + + +L + DPLV++M VEK P TY +GGLDNQI
Sbjct: 135 ILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQI 194
Query: 221 KEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSE 280
+EIKE +ELP+ HPE ++ +GI PKGV+LYG PGTGKTLLA+AVA+ T TF+RV G E
Sbjct: 195 QEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGLE 254
Query: 281 LVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMD 340
L+QK++G+G ++VRELF +A EHAPSI+F+D
Sbjct: 255 LIQKYLGDGPKLVRELFRVAE-----------------------------EHAPSIVFID 285
Query: 341 EIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
EID+IG+ R +S SGG+ E+QRTMLELLNQLDGF++
Sbjct: 286 EIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDS 321
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 38/45 (84%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV G EL+QK++G+G ++VRELF +A
Sbjct: 230 TGKTLLAKAVANQTSATFLRVVGLELIQKYLGDGPKLVRELFRVA 274
>gi|403221202|dbj|BAM39335.1| 26S proteasome subunit 4 [Theileria orientalis strain Shintoku]
Length = 438
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 112/242 (46%), Positives = 163/242 (67%), Gaps = 29/242 (11%)
Query: 135 VGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVD 194
VG + + +D+ +V ++ V I +D + P C V L N+++++ IL + VD
Sbjct: 107 VGTLEEIIDENHAIVTSSIGPEYYVTILSFVDKELLEPGCSVLLHNKTHSIVGILLDDVD 166
Query: 195 PLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPP 254
PL+S+M V+K P +Y+ +GGL++QI+EIKE +ELP+ PEL+D +GI PKGV+LYGPP
Sbjct: 167 PLISVMKVDKAPLESYDDIGGLEDQIQEIKEAVELPLTRPELYDDIGIKPPKGVILYGPP 226
Query: 255 GTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLF 314
GTGKTLLA+AVA+ T TF+RV GSEL+QK++GEG ++VRE+F +A
Sbjct: 227 GTGKTLLAKAVANETSATFLRVVGSELIQKYLGEGPKLVREMFKVA-------------- 272
Query: 315 WSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGF 374
+++APSIIF+DEID+IG+ R ++ SGG+ E+QRTMLELLNQLDGF
Sbjct: 273 ---------------QDNAPSIIFIDEIDAIGTKRYDATSGGEKEIQRTMLELLNQLDGF 317
Query: 375 EA 376
++
Sbjct: 318 DS 319
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 41/51 (80%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
+GKTLLA+AVA+ T TF+RV GSEL+QK++GEG ++VRE+F +A+ S
Sbjct: 228 TGKTLLAKAVANETSATFLRVVGSELIQKYLGEGPKLVREMFKVAQDNAPS 278
>gi|323508164|emb|CBQ68035.1| probable RPT1-26S proteasome regulatory subunit [Sporisorium
reilianum SRZ2]
Length = 477
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 117/234 (50%), Positives = 150/234 (64%), Gaps = 29/234 (12%)
Query: 143 DKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMV 202
++ K ++ V KFVV + + + D+ RV + Y + LP K+DP V++M V
Sbjct: 151 EEDKYVINVKQIAKFVVSLGERVAPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMQV 210
Query: 203 EKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 262
E+ PD TY VGG QI++++EV+ELP+ PE F LGI PKGVLLYGPPGTGKTL A
Sbjct: 211 EEKPDVTYGDVGGCKEQIEKLREVVELPLLSPERFVNLGIDPPKGVLLYGPPGTGKTLCA 270
Query: 263 RAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILT 322
RAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 271 RAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKK------------------ 312
Query: 323 NTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
C IIF DE+D+IG +R + G+GGD+EVQRTMLEL+NQLDGF+A
Sbjct: 313 ---AC--------IIFFDEVDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDA 355
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 264 TGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTK 311
>gi|74142439|dbj|BAE31973.1| unnamed protein product [Mus musculus]
Length = 433
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 114/230 (49%), Positives = 147/230 (63%), Gaps = 29/230 (12%)
Query: 146 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
K ++ V +FVVD+ + D+ RV + Y +H LP K+DP V++M VE+
Sbjct: 110 KYIINVKQFAEFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEK 169
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
PD TY VGG QI++++EV+E P+ HPE F LGI PKGVLL+GPPGTGKTL ARAV
Sbjct: 170 PDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 229
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTI 325
A+ ++ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 230 ANRSDACFIRVIGSELVQKYVGEGARMVRELFEMARTKK--------------------- 268
Query: 326 VCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C +IF DEID+IG +R + G+GGD+EVQRTMLEL+NQLDGF+
Sbjct: 269 AC--------LIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFD 310
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ ++ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 220 TGKTLCARAVANRSDACFIRVIGSELVQKYVGEGARMVRELFEMARTK 267
>gi|121709954|ref|XP_001272593.1| proteasome regulatory particle subunit Rpt4, putative [Aspergillus
clavatus NRRL 1]
gi|119400743|gb|EAW11167.1| proteasome regulatory particle subunit Rpt4, putative [Aspergillus
clavatus NRRL 1]
Length = 393
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 118/277 (42%), Positives = 167/277 (60%), Gaps = 29/277 (10%)
Query: 99 EKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFV 158
E E LR L+ +L + + E ++ LQ G +GEV+K +D+++ +VK ++V
Sbjct: 25 EWEAKLRNLRLGIKDLQREFDISEENIKALQSVGQIIGEVLKQLDEERFIVKASSGPRYV 84
Query: 159 VDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDN 218
V +D + + RVAL + T+ ++LP +VDPLV M +E + +GGL++
Sbjct: 85 VGCRSKVDKSKLKQGTRVALDMTTLTIMRMLPREVDPLVYNMSLEDPGQVNFAGIGGLND 144
Query: 219 QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSG 278
QI+E++EVIELP+K+PELF +GI PKGVLLYGPPGTGKTLLARAVA E F++V
Sbjct: 145 QIRELREVIELPLKNPELFQRVGIKPPKGVLLYGPPGTGKTLLARAVASSMETNFLKVVS 204
Query: 279 SELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIF 338
S +V K+IGE +R++RE+F A +EH P IIF
Sbjct: 205 SAIVDKYIGESARLIREMFGYA-----------------------------KEHEPCIIF 235
Query: 339 MDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
MDEID+IG R G+ D E+QRT++ELLNQLDGF+
Sbjct: 236 MDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFD 272
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 34/46 (73%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA E F++V S +V K+IGE +R++RE+F A+
Sbjct: 182 TGKTLLARAVASSMETNFLKVVSSAIVDKYIGESARLIREMFGYAK 227
>gi|255550263|ref|XP_002516182.1| 26S protease regulatory subunit, putative [Ricinus communis]
gi|223544668|gb|EEF46184.1| 26S protease regulatory subunit, putative [Ricinus communis]
Length = 430
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 133/312 (42%), Positives = 183/312 (58%), Gaps = 37/312 (11%)
Query: 73 DEAIKSSEGFKPYYVT-KIEELQL-IVAEKEQNLRRLQAQRNELNAKVRM-LREELQLLQ 129
D A+ + G PY + K EE ++ +A+K +L ++ L A + L + Q++Q
Sbjct: 26 DIALLKTYGLGPYSNSIKKEEKEIKDLAKKINDLCGIKESDTGLAAPSQWDLVSDKQMMQ 85
Query: 130 E----QGSYVGEVVKP-MDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYT 184
E Q + +++ P + K ++ V KFVV + + D+ RV + Y
Sbjct: 86 EEQPLQVARCTKIISPNTEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQ 145
Query: 185 LHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQ 244
+ LP K+DP V++M VE+ PD TY VGG QI++++EV+ELP+ HPE F LGI
Sbjct: 146 IQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDP 205
Query: 245 PKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKK 304
PKGVL YGPPGTGKTLLARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 206 PKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKK 265
Query: 305 LAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTM 364
I+F DE+D+IG +R + G GGD+EVQRTM
Sbjct: 266 AC-----------------------------IVFFDEVDAIGGARFDDGVGGDNEVQRTM 296
Query: 365 LELLNQLDGFEA 376
LE++NQLDGF+A
Sbjct: 297 LEIVNQLDGFDA 308
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTLLARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 217 TGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSK 264
>gi|71000273|ref|XP_754831.1| proteasome regulatory particle subunit Rpt1 [Aspergillus fumigatus
Af293]
gi|119492632|ref|XP_001263660.1| proteasome regulatory particle subunit Rpt1, putative [Neosartorya
fischeri NRRL 181]
gi|66852468|gb|EAL92793.1| proteasome regulatory particle subunit Rpt1, putative [Aspergillus
fumigatus Af293]
gi|119411820|gb|EAW21763.1| proteasome regulatory particle subunit Rpt1, putative [Neosartorya
fischeri NRRL 181]
gi|159127842|gb|EDP52957.1| proteasome regulatory particle subunit Rpt1, putative [Aspergillus
fumigatus A1163]
Length = 439
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 117/237 (49%), Positives = 149/237 (62%), Gaps = 29/237 (12%)
Query: 140 KPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSL 199
K DK K ++ V KFVV++ + + D+ RV + Y + LP K+DP V++
Sbjct: 110 KDPDKSKYVINVKQIAKFVVNLGERVSPTDIEEGMRVGVDRNKYQIMLPLPPKIDPSVTM 169
Query: 200 MMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKT 259
M VE PD TY VGG QI++++EV+E+P+ PE F LGI PKG LLYGPPGTGKT
Sbjct: 170 MTVEDKPDVTYGDVGGCKEQIEKLREVVEMPLLSPERFVNLGIDPPKGALLYGPPGTGKT 229
Query: 260 LLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLT 319
L ARAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 230 LCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKK--------------- 274
Query: 320 ILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
C IIF DEID++G +R + G+GGD+EVQRTMLEL+ QLDGF+A
Sbjct: 275 ------AC--------IIFFDEIDAVGGARFDDGAGGDNEVQRTMLELITQLDGFDA 317
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 226 TGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTK 273
>gi|391341083|ref|XP_003744861.1| PREDICTED: 26S protease regulatory subunit 7-like isoform 2
[Metaseiulus occidentalis]
Length = 411
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 114/221 (51%), Positives = 145/221 (65%), Gaps = 29/221 (13%)
Query: 155 GKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVG 214
KFVVD+ +++ D+ RV + Y +H LP K+DP V++M VE+ PD TY VG
Sbjct: 97 AKFVVDLAESVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYTDVG 156
Query: 215 GLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFI 274
G QI++++EV+E P+ HPE F LGI PKGVLL+GPPGTGKTL ARAVA+ T+ FI
Sbjct: 157 GCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFI 216
Query: 275 RVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAP 334
RV GSELVQK++GEG+RMVRELF MA KK C
Sbjct: 217 RVIGSELVQKYVGEGARMVRELFEMARTKK---------------------AC------- 248
Query: 335 SIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
+IF DEID+IG +R + G+GGD+EVQRTMLEL+NQLDGF+
Sbjct: 249 -LIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFD 288
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 198 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTK 245
>gi|313238058|emb|CBY13177.1| unnamed protein product [Oikopleura dioica]
Length = 389
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 118/291 (40%), Positives = 172/291 (59%), Gaps = 33/291 (11%)
Query: 86 YVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKK 145
Y K++E +L+ E L+ + + +L + +L+ LQ G VGEV+K + +
Sbjct: 12 YRRKLQETRLL----ESKLKNTRQKEKDLQKEYEKSENDLKALQSVGQIVGEVLKQLTDE 67
Query: 146 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
K +VK ++VV + +D N++ RVAL + T+ + LP +VDPLV M E
Sbjct: 68 KFIVKATNGPRYVVGCRRQVDKNELKAGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDP 127
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
+ +Y +GGL +Q++E++EVIELP+ +PELF +GI+ PKG LLYGPPGTGKTLLARAV
Sbjct: 128 GNISYSEIGGLSDQVRELREVIELPLNNPELFQRVGISPPKGCLLYGPPGTGKTLLARAV 187
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTI 325
A + F++V S +V K+IGE +R++RE+F A
Sbjct: 188 ASQLDANFLKVVSSAIVDKYIGESARLIREMFNYA------------------------- 222
Query: 326 VCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
R+H P IIFMDEID+IG R G+ D E+QRT++ELLNQ+DGF+A
Sbjct: 223 ----RDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDA 269
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 34/46 (73%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA + F++V S +V K+IGE +R++RE+F AR
Sbjct: 178 TGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYAR 223
>gi|67603252|ref|XP_666536.1| 26S proteasome regulatory subunit [Cryptosporidium hominis TU502]
gi|54657551|gb|EAL36305.1| 26S proteasome regulatory subunit [Cryptosporidium hominis]
Length = 391
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 119/290 (41%), Positives = 173/290 (59%), Gaps = 33/290 (11%)
Query: 86 YVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKK 145
Y K++E + E E +L++ + + EL+ ++L+ LQ G +GEV++ +D +
Sbjct: 14 YAQKVKEHR----ELEVSLKKKRMEIRELSKVYDKTEDDLKALQSVGQIIGEVLRHLDDE 69
Query: 146 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
K +VK ++VV +D + +T RVAL + T+ + LP +VDP+V M+ E
Sbjct: 70 KCIVKASTGPRYVVGCRSKLDKSKLTSGTRVALDATTLTIMRRLPREVDPMVYNMLHEDP 129
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
+Y VGGL+ QI+EI+EVIELP+ +PELF +GI PKGVLLYGPPGTGKTLLARA+
Sbjct: 130 GSVSYSQVGGLNEQIREIREVIELPLTNPELFKRVGIKTPKGVLLYGPPGTGKTLLARAM 189
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTI 325
A C F++V S +V K+IGE +R++RE+F A
Sbjct: 190 ASSMNCNFMKVVASAIVDKYIGESARVIREMFGYA------------------------- 224
Query: 326 VCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
++H P +IFMDEID+IG R G+ D E+QRT++ELLNQLDGF+
Sbjct: 225 ----KDHQPCVIFMDEIDAIGGKRFSQGTSADREIQRTLMELLNQLDGFD 270
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 34/46 (73%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARA+A C F++V S +V K+IGE +R++RE+F A+
Sbjct: 180 TGKTLLARAMASSMNCNFMKVVASAIVDKYIGESARVIREMFGYAK 225
>gi|196007252|ref|XP_002113492.1| conserved hypothetical protein [Trichoplax adhaerens]
gi|190583896|gb|EDV23966.1| conserved hypothetical protein [Trichoplax adhaerens]
Length = 434
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 115/230 (50%), Positives = 147/230 (63%), Gaps = 29/230 (12%)
Query: 146 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
+ ++ V KFVVD+ ++ D+ RV + Y +H LP K+DP V++M VE
Sbjct: 111 RYIINVKQFAKFVVDLKDHVAPTDIEEGMRVGVDRNKYQIHLPLPPKIDPAVTMMQVEDK 170
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
PD TY VGG QI +++EV+E+P+ HPE F LGI PKGVLL+GPPGTGKTL ARAV
Sbjct: 171 PDVTYSDVGGCKEQIDKLREVVEMPMLHPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAV 230
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTI 325
A+ T+ FIRV GSELVQK++GEG+RMVRELF +A KK
Sbjct: 231 ANRTDACFIRVIGSELVQKYVGEGARMVRELFELARSKK--------------------- 269
Query: 326 VCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C IIF DEID+IG +R + G+GGD+EVQRTMLEL+NQLDGF+
Sbjct: 270 AC--------IIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFD 311
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF +AR K
Sbjct: 221 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFELARSK 268
>gi|387912852|sp|Q9V287.2|PAN_PYRAB RecName: Full=Proteasome-activating nucleotidase; Short=PAN;
AltName: Full=Proteasomal ATPase; AltName:
Full=Proteasome regulatory ATPase; AltName:
Full=Proteasome regulatory particle
gi|380740929|tpe|CCE69563.1| TPA: proteasome-activating nucleotidase [Pyrococcus abyssi GE5]
Length = 396
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 118/294 (40%), Positives = 180/294 (61%), Gaps = 29/294 (9%)
Query: 82 FKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKP 141
F Y I L+ + + E +R L+A + L ++ LR E+ L++ ++ G V++
Sbjct: 8 FHENYDDYITYLKRRIRQLELQVRMLEADKERLERELSRLRSEMSRLRQPPAFAGTVIEV 67
Query: 142 MDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMM 201
+D + +V+ + +FVV I I+ + + P RVAL + + ++LP+ DP V
Sbjct: 68 LDDDRAIVQNYNGPRFVVRIAPWIERDKLRPGARVALDQRTMAIIELLPSSKDPTVLGFE 127
Query: 202 VEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLL 261
V + P+ TY +GGL Q++E++E IELP+KHPELF+ +GI PKGVLLYGPPG GKTL+
Sbjct: 128 VIERPNVTYNDIGGLKKQLQELREAIELPLKHPELFEEVGIDPPKGVLLYGPPGCGKTLM 187
Query: 262 ARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTIL 321
A+A+AH TFIRV GSELV+K+IGEG+R+V ELF +A
Sbjct: 188 AKALAHEVNATFIRVVGSELVRKYIGEGARLVHELFELA--------------------- 226
Query: 322 TNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
+E AP+IIF+DEID+IG+ R++ +GG+ EV RT+++LL ++DGF+
Sbjct: 227 --------KEKAPTIIFIDEIDAIGAKRMDETTGGEREVNRTLMQLLAEMDGFD 272
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 40/50 (80%)
Query: 13 GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
GKTL+A+A+AH TFIRV GSELV+K+IGEG+R+V ELF +A+ K +
Sbjct: 183 GKTLMAKALAHEVNATFIRVVGSELVRKYIGEGARLVHELFELAKEKAPT 232
>gi|71004206|ref|XP_756769.1| hypothetical protein UM00622.1 [Ustilago maydis 521]
gi|46095658|gb|EAK80891.1| hypothetical protein UM00622.1 [Ustilago maydis 521]
Length = 478
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 117/234 (50%), Positives = 150/234 (64%), Gaps = 29/234 (12%)
Query: 143 DKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMV 202
++ K ++ V KFVV + + + D+ RV + Y + LP K+DP V++M V
Sbjct: 152 EEDKYVINVKQIAKFVVSLGERVAPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMQV 211
Query: 203 EKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 262
E+ PD TY VGG QI++++EV+ELP+ PE F LGI PKGVLLYGPPGTGKTL A
Sbjct: 212 EEKPDVTYGDVGGCKEQIEKLREVVELPLLSPERFVNLGIDPPKGVLLYGPPGTGKTLCA 271
Query: 263 RAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILT 322
RAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 272 RAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKK------------------ 313
Query: 323 NTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
C IIF DE+D+IG +R + G+GGD+EVQRTMLEL+NQLDGF+A
Sbjct: 314 ---AC--------IIFFDEVDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDA 356
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 265 TGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTK 312
>gi|332031295|gb|EGI70823.1| 26S protease regulatory subunit 4 [Acromyrmex echinatior]
Length = 439
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 119/288 (41%), Positives = 176/288 (61%), Gaps = 33/288 (11%)
Query: 89 KIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVL 148
+I++ L+ E +N RL+ Q + + R ++ L+ VG + + +D +
Sbjct: 66 RIKDYLLMEEEFIRNQERLKPQEEKNEEE----RSKVDDLRGTPMSVGTLEEIIDDNHAI 121
Query: 149 VKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDS 208
V + V I +D + + P C V L ++ + + +L + DP+V++M +EK P
Sbjct: 122 VSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLGDDTDPMVTVMKLEKAPQE 181
Query: 209 TYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH 268
TY +GGLD QI+EIKE +ELP+ HPE ++ +GI PKGV+LYGPPGTGKTLLA+AVA+
Sbjct: 182 TYTDIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQ 241
Query: 269 TECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCN 328
T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 242 TSATFLRVVGSELIQKYLGDGPKLVRELFRVAE--------------------------- 274
Query: 329 FREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
EHAPSI+F+DEID++G+ R +S SGG+ E+QRTMLELLNQLDGF++
Sbjct: 275 --EHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDS 320
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 229 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 273
>gi|328767732|gb|EGF77781.1| hypothetical protein BATDEDRAFT_32324 [Batrachochytrium
dendrobatidis JAM81]
Length = 440
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 122/288 (42%), Positives = 176/288 (61%), Gaps = 33/288 (11%)
Query: 89 KIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVL 148
+I++ L+ E QN RL+ Q AK + R + L+ VG + + +D +
Sbjct: 67 RIKDYLLLEEEFVQNQERLKPQ----EAKNQAERSNVDDLRGTPMNVGSLEEIIDDDHAI 122
Query: 149 VKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDS 208
V + V I +D + + P C V L +++ + +L + DP+VS+M +EK P
Sbjct: 123 VSISTGPDHYVSIMSFVDKDLLEPGCAVLLHHKTMAVVGVLQDDADPMVSVMKLEKAPTE 182
Query: 209 TYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH 268
+Y VGGL+ QI+EIKE +ELP+ HPEL++ +GI PKGV+LYG PGTGKTLLA+AVA+
Sbjct: 183 SYADVGGLEQQIQEIKEAVELPLTHPELYEEMGIKPPKGVILYGVPGTGKTLLAKAVANQ 242
Query: 269 TECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCN 328
T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 243 TSATFLRVVGSELIQKYLGDGPKLVRELFRVAE--------------------------- 275
Query: 329 FREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
+HAPSI+F+DEID+IG+ R +S SGG+ E+QRTMLELLNQLDGF++
Sbjct: 276 --DHAPSIVFIDEIDAIGTKRYDSTSGGEREIQRTMLELLNQLDGFDS 321
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 40/51 (78%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A S
Sbjct: 230 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEDHAPS 280
>gi|66359630|ref|XP_626993.1| 26S proteasome regulatory subunit S10b like AAA+ ATpase
[Cryptosporidium parvum Iowa II]
gi|46228795|gb|EAK89665.1| 26S proteasome regulatory subunit S10b like AAA+ ATpase
[Cryptosporidium parvum Iowa II]
Length = 406
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 119/290 (41%), Positives = 173/290 (59%), Gaps = 33/290 (11%)
Query: 86 YVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKK 145
Y K++E + E E +L++ + + EL+ ++L+ LQ G +GEV++ +D +
Sbjct: 29 YAQKVKEHR----ELEVSLKKKRMEIRELSKVYDKTEDDLKALQSVGQIIGEVLRHLDDE 84
Query: 146 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
K +VK ++VV +D + +T RVAL + T+ + LP +VDP+V M+ E
Sbjct: 85 KCIVKASTGPRYVVGCRSKLDKSKLTSGTRVALDATTLTIMRRLPREVDPMVYNMLHEDP 144
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
+Y VGGL+ QI+EI+EVIELP+ +PELF +GI PKGVLLYGPPGTGKTLLARA+
Sbjct: 145 GSVSYSQVGGLNEQIREIREVIELPLTNPELFKRVGIKTPKGVLLYGPPGTGKTLLARAM 204
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTI 325
A C F++V S +V K+IGE +R++RE+F A
Sbjct: 205 ASSMNCNFMKVVASAIVDKYIGESARVIREMFGYA------------------------- 239
Query: 326 VCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
++H P +IFMDEID+IG R G+ D E+QRT++ELLNQLDGF+
Sbjct: 240 ----KDHQPCVIFMDEIDAIGGKRFSQGTSADREIQRTLMELLNQLDGFD 285
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 34/46 (73%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARA+A C F++V S +V K+IGE +R++RE+F A+
Sbjct: 195 TGKTLLARAMASSMNCNFMKVVASAIVDKYIGESARVIREMFGYAK 240
>gi|388855210|emb|CCF51104.1| probable RPT1-26S proteasome regulatory subunit [Ustilago hordei]
Length = 471
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 117/234 (50%), Positives = 150/234 (64%), Gaps = 29/234 (12%)
Query: 143 DKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMV 202
++ K ++ V KFVV + + + D+ RV + Y + LP K+DP V++M V
Sbjct: 145 EEDKYVINVKQIAKFVVSLGERVAPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMQV 204
Query: 203 EKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 262
E+ PD TY VGG QI++++EV+ELP+ PE F LGI PKGVLLYGPPGTGKTL A
Sbjct: 205 EEKPDVTYGDVGGCKEQIEKLREVVELPLLSPERFVNLGIDPPKGVLLYGPPGTGKTLCA 264
Query: 263 RAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILT 322
RAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 265 RAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKK------------------ 306
Query: 323 NTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
C IIF DE+D+IG +R + G+GGD+EVQRTMLEL+NQLDGF+A
Sbjct: 307 ---AC--------IIFFDEVDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDA 349
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 258 TGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTK 305
>gi|313237711|emb|CBY12850.1| unnamed protein product [Oikopleura dioica]
gi|313245264|emb|CBY40047.1| unnamed protein product [Oikopleura dioica]
Length = 437
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 115/231 (49%), Positives = 150/231 (64%), Gaps = 29/231 (12%)
Query: 146 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
K ++ V KFVVD+ + + D+ RV + Y ++ LP K+DP V++M VE+
Sbjct: 114 KYIINVKQFAKFVVDLGQQVAPTDIEEGMRVGVDRTKYQINIPLPPKIDPSVTMMTVEEK 173
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
PD TY VGG + I++++EV+E+P+ +PE F LGI PKGVL+YGPPGTGKTL ARAV
Sbjct: 174 PDVTYSDVGGCKDAIEKMREVVEIPLLNPEKFVNLGIDPPKGVLMYGPPGTGKTLCARAV 233
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTI 325
A+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 234 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKK--------------------- 272
Query: 326 VCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
C IIF DEID++G +R + GSGGD+EVQRTMLEL+NQLDGF+A
Sbjct: 273 AC--------IIFFDEIDAVGGARFDDGSGGDNEVQRTMLELINQLDGFDA 315
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 224 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTK 271
>gi|14520405|ref|NP_125880.1| proteasome-activating nucleotidase [Pyrococcus abyssi GE5]
gi|5457620|emb|CAB49111.1| 26S protease regulatory subunit 4 [Pyrococcus abyssi GE5]
Length = 399
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 118/294 (40%), Positives = 180/294 (61%), Gaps = 29/294 (9%)
Query: 82 FKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKP 141
F Y I L+ + + E +R L+A + L ++ LR E+ L++ ++ G V++
Sbjct: 11 FHENYDDYITYLKRRIRQLELQVRMLEADKERLERELSRLRSEMSRLRQPPAFAGTVIEV 70
Query: 142 MDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMM 201
+D + +V+ + +FVV I I+ + + P RVAL + + ++LP+ DP V
Sbjct: 71 LDDDRAIVQNYNGPRFVVRIAPWIERDKLRPGARVALDQRTMAIIELLPSSKDPTVLGFE 130
Query: 202 VEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLL 261
V + P+ TY +GGL Q++E++E IELP+KHPELF+ +GI PKGVLLYGPPG GKTL+
Sbjct: 131 VIERPNVTYNDIGGLKKQLQELREAIELPLKHPELFEEVGIDPPKGVLLYGPPGCGKTLM 190
Query: 262 ARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTIL 321
A+A+AH TFIRV GSELV+K+IGEG+R+V ELF +A
Sbjct: 191 AKALAHEVNATFIRVVGSELVRKYIGEGARLVHELFELA--------------------- 229
Query: 322 TNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
+E AP+IIF+DEID+IG+ R++ +GG+ EV RT+++LL ++DGF+
Sbjct: 230 --------KEKAPTIIFIDEIDAIGAKRMDETTGGEREVNRTLMQLLAEMDGFD 275
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 40/50 (80%)
Query: 13 GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
GKTL+A+A+AH TFIRV GSELV+K+IGEG+R+V ELF +A+ K +
Sbjct: 186 GKTLMAKALAHEVNATFIRVVGSELVRKYIGEGARLVHELFELAKEKAPT 235
>gi|307175886|gb|EFN65701.1| 26S protease regulatory subunit 4 [Camponotus floridanus]
Length = 440
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 119/288 (41%), Positives = 176/288 (61%), Gaps = 33/288 (11%)
Query: 89 KIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVL 148
+I++ L+ E +N RL+ Q + + R ++ L+ VG + + +D +
Sbjct: 67 RIKDYLLMEEEFIRNQERLKPQEEKNEEE----RSKVDDLRGTPMSVGTLEEIIDDNHAI 122
Query: 149 VKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDS 208
V + V I +D + + P C V L ++ + + +L + DP+V++M +EK P
Sbjct: 123 VSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLGDDTDPMVTVMKLEKAPQE 182
Query: 209 TYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH 268
TY +GGLD QI+EIKE +ELP+ HPE ++ +GI PKGV+LYGPPGTGKTLLA+AVA+
Sbjct: 183 TYTDIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQ 242
Query: 269 TECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCN 328
T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 243 TSATFLRVVGSELIQKYLGDGPKLVRELFRVAE--------------------------- 275
Query: 329 FREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
EHAPSI+F+DEID++G+ R +S SGG+ E+QRTMLELLNQLDGF++
Sbjct: 276 --EHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDS 321
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 230 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 274
>gi|391344100|ref|XP_003746341.1| PREDICTED: 26S protease regulatory subunit 4-like [Metaseiulus
occidentalis]
Length = 438
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 110/242 (45%), Positives = 156/242 (64%), Gaps = 29/242 (11%)
Query: 135 VGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVD 194
VG + + +D +V + V I +D + + P C V L ++ + + +L + D
Sbjct: 107 VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTD 166
Query: 195 PLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPP 254
P+V++M +EK P TY +GGLD QI+EIKE +ELP+ HPE ++ +GI PKGV+LYGPP
Sbjct: 167 PMVTVMKLEKAPQETYADIGGLDQQIQEIKESVELPLTHPEYYEEMGIRPPKGVILYGPP 226
Query: 255 GTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLF 314
GTGKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 227 GTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAE------------- 273
Query: 315 WSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGF 374
EHAPSI+F+DEID++G+ R +S SGG+ E+QRTMLELLNQLDGF
Sbjct: 274 ----------------EHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGF 317
Query: 375 EA 376
++
Sbjct: 318 DS 319
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 228 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 272
>gi|384251663|gb|EIE25140.1| 26S proteasome subunit P45 [Coccomyxa subellipsoidea C-169]
Length = 424
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 125/291 (42%), Positives = 174/291 (59%), Gaps = 36/291 (12%)
Query: 87 VTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKP-MDKK 145
V K+ E+ + KE + R +L + + ++EE L Q + +++KP ++
Sbjct: 47 VKKVNEVSGV---KESDTGLAPPSRWDLVSDKQAMQEEQPL---QVARCTKIIKPGTEEA 100
Query: 146 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
K ++ V KFVV + + D+ RV + Y + LP K+DP V++M VE+
Sbjct: 101 KYVINVKQIAKFVVGLGDRVAPTDIEEGMRVGVDRNKYQIQIPLPPKIDPTVTMMTVEEK 160
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
PD TY +GG QI++++EV+ELP+ HPE F LGI PKGVL YGPPGTGKTLLARAV
Sbjct: 161 PDVTYSDIGGCKEQIEKMREVVELPMLHPEKFVQLGIDPPKGVLCYGPPGTGKTLLARAV 220
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTI 325
A+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 221 ANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKAC------------------- 261
Query: 326 VCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
++F DEID+IG +R + G+GGD+EVQRTMLE++NQLDGF++
Sbjct: 262 ----------LVFFDEIDAIGGARFDDGAGGDNEVQRTMLEIVNQLDGFDS 302
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTLLARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 211 TGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSK 258
>gi|449469943|ref|XP_004152678.1| PREDICTED: 26S protease regulatory subunit S10B homolog B-like
[Cucumis sativus]
gi|449515750|ref|XP_004164911.1| PREDICTED: 26S protease regulatory subunit S10B homolog B-like
[Cucumis sativus]
Length = 398
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 118/288 (40%), Positives = 169/288 (58%), Gaps = 43/288 (14%)
Query: 102 QNLRRLQAQRNELNAKVRMLRE--------------ELQLLQEQGSYVGEVVKPMDKKKV 147
+ R+ Q EL A+VR LRE +L+ LQ G +GEV++P+D +++
Sbjct: 15 NDYRKKLLQHKELEARVRSLRENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERL 74
Query: 148 LVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPD 207
+VK ++VV +D +T RV L + T+ + LP +VDP+V M+ E +
Sbjct: 75 IVKASSGPRYVVGCRNKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGN 134
Query: 208 STYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAH 267
+Y VGGL +QI+E++E IELP+ +PELF +GI PKGVLLYGPPGTGKTLLARA+A
Sbjct: 135 VSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIAS 194
Query: 268 HTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVC 327
+ + F++V S ++ K+IGE +R++RE+F A
Sbjct: 195 NIDANFLKVVSSAIIDKYIGESARLIREMFGYA--------------------------- 227
Query: 328 NFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
R+H P IIFMDEID+IG R G+ D E+QRT++ELLNQLDGF+
Sbjct: 228 --RDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFD 273
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 35/46 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARA+A + + F++V S ++ K+IGE +R++RE+F AR
Sbjct: 183 TGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYAR 228
>gi|6652878|gb|AAF22521.1|AF123390_1 26S proteasome AAA-ATPase subunit RPT1a [Arabidopsis thaliana]
Length = 426
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 131/312 (41%), Positives = 181/312 (58%), Gaps = 37/312 (11%)
Query: 73 DEAIKSSEGFKPYY--VTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRM-LREELQLLQ 129
D A+ + G PY + K+E+ +A+K +L ++ L + L + Q++Q
Sbjct: 22 DIALLKTYGLGPYSAPIKKVEKEIKDLAKKINDLCGIKESDTGLAPPSQWDLVSDKQMMQ 81
Query: 130 E----QGSYVGEVVKP-MDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYT 184
E Q + +++ P + K ++ V KFVV + + D+ RV + Y
Sbjct: 82 EEQPLQVARCTKIISPNTEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQ 141
Query: 185 LHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQ 244
+ LP K+DP V++M VE+ PD TY VGG QI++++EV+ELP+ HPE F LGI
Sbjct: 142 IQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDP 201
Query: 245 PKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKK 304
PKGVL YGPPGTGKTLLARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 202 PKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKK 261
Query: 305 LAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTM 364
I+F DE+D+IG +R + G GGD+EVQRTM
Sbjct: 262 AC-----------------------------IVFFDEVDAIGGARFDDGVGGDNEVQRTM 292
Query: 365 LELLNQLDGFEA 376
LE++NQLDGF+A
Sbjct: 293 LEIVNQLDGFDA 304
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTLLARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 213 TGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSK 260
>gi|402581050|gb|EJW74999.1| 26S protease regulatory subunit 7, partial [Wuchereria bancrofti]
Length = 360
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 116/230 (50%), Positives = 146/230 (63%), Gaps = 29/230 (12%)
Query: 146 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
+ L+ V KFVVD+ + D+ RV + Y +H LP K+DP V++M VE+
Sbjct: 107 RYLINVKQFAKFVVDLADTVAPTDIEEGMRVGVDRNKYQIHLPLPAKIDPSVTMMQVEEK 166
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
PD TY VGG QI++++EV+E P+ HPE F LGI PKGVLLYGPPGTGKTL ARAV
Sbjct: 167 PDVTYADVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLYGPPGTGKTLCARAV 226
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTI 325
A+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 227 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARSKK--------------------- 265
Query: 326 VCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C +IF DEID++G +R + G GGD+EVQRTMLEL+NQLDGF+
Sbjct: 266 AC--------LIFFDEIDAVGGARFDDGMGGDNEVQRTMLELINQLDGFD 307
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 217 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARSK 264
>gi|375081910|ref|ZP_09728985.1| proteasome-activating nucleotidase [Thermococcus litoralis DSM
5473]
gi|374743447|gb|EHR79810.1| proteasome-activating nucleotidase [Thermococcus litoralis DSM
5473]
Length = 399
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 120/303 (39%), Positives = 184/303 (60%), Gaps = 33/303 (10%)
Query: 73 DEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQG 132
D +K EG+ Y + L+ + + E +R L+A + L ++ LR E+ +++
Sbjct: 6 DVNVKHEEGYDDY----VYYLKRRIRQFELQVRTLEADKERLERELSRLRMEMSRMRQPP 61
Query: 133 SYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNK 192
++ G +++ +D+ + +V+ + +FVV I I+ + P RVAL + + ++LP++
Sbjct: 62 AFAGTLIELLDEDRAIVQNYNGPRFVVRIAPWIEREKLKPGARVALDQRTMAVIELLPSQ 121
Query: 193 VDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYG 252
DP V V + P TY +GGL Q+ E++E IELP+KHPELF+ +GI PKGVLLYG
Sbjct: 122 KDPSVLGFEVIERPKVTYNDIGGLKKQLMELREAIELPLKHPELFERVGIEPPKGVLLYG 181
Query: 253 PPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPL 312
PPG GKTL+A+A+AH TFIRV GSELV+K+IGEG+R+V ELF +A
Sbjct: 182 PPGCGKTLMAKALAHEVNATFIRVVGSELVRKYIGEGARLVSELFELA------------ 229
Query: 313 LFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLD 372
RE APSI+F+DEID+IG+ R++ +GG+ EV RT+++LL +LD
Sbjct: 230 -----------------REKAPSIVFIDEIDAIGAKRLDETTGGEREVNRTLMQLLAELD 272
Query: 373 GFE 375
GF+
Sbjct: 273 GFD 275
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/50 (64%), Positives = 40/50 (80%)
Query: 13 GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
GKTL+A+A+AH TFIRV GSELV+K+IGEG+R+V ELF +AR K S
Sbjct: 186 GKTLMAKALAHEVNATFIRVVGSELVRKYIGEGARLVSELFELAREKAPS 235
>gi|356510076|ref|XP_003523766.1| PREDICTED: 26S protease regulatory subunit S10B homolog B-like
isoform 2 [Glycine max]
gi|356518573|ref|XP_003527953.1| PREDICTED: 26S protease regulatory subunit S10B homolog B-like
isoform 2 [Glycine max]
Length = 334
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 121/302 (40%), Positives = 174/302 (57%), Gaps = 52/302 (17%)
Query: 97 VAEKEQNLRRLQA---------QRNELNAKVRMLRE--------------ELQLLQEQGS 133
+AE E +RR A Q EL ++VR +RE +L+ LQ G
Sbjct: 1 MAEAEDAVRRRNAVAEYRKKLLQHKELESRVRSVRENLRASKKEFNKTEDDLKSLQSVGQ 60
Query: 134 YVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKV 193
+GEV++P+D ++++VK ++VV +D +T RV L + T+ + LP +V
Sbjct: 61 IIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREV 120
Query: 194 DPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGP 253
DP+V M+ E + +Y VGGL +QI+E++E IELP+ +PELF +GI PKGVLLYGP
Sbjct: 121 DPVVYNMLHEDPGNISYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGP 180
Query: 254 PGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLL 313
PGTGKTLLARA+A + + F++V S ++ K+IGE +R++RE+F A
Sbjct: 181 PGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYA------------- 227
Query: 314 FWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDG 373
R+H P IIFMDEID+IG R G+ D E+QRT++ELLNQLDG
Sbjct: 228 ----------------RDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDG 271
Query: 374 FE 375
F+
Sbjct: 272 FD 273
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 35/46 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARA+A + + F++V S ++ K+IGE +R++RE+F AR
Sbjct: 183 TGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYAR 228
>gi|15220930|ref|NP_175778.1| regulatory particle triple-A 1A [Arabidopsis thaliana]
gi|297853156|ref|XP_002894459.1| regulatory particle triple-a 1A [Arabidopsis lyrata subsp. lyrata]
gi|28558169|sp|Q9SSB5.1|PRS7A_ARATH RecName: Full=26S protease regulatory subunit 7 homolog A; AltName:
Full=26S proteasome AAA-ATPase subunit RPT1a; AltName:
Full=26S proteasome subunit 7 homolog A; AltName:
Full=Regulatory particle triple-A ATPase subunit 1a
gi|6056388|gb|AAF02852.1|AC009324_1 26S proteasome ATPase subunit [Arabidopsis thaliana]
gi|12324021|gb|AAG51970.1|AC024260_8 26S proteasome ATPase subunit; 3861-6264 [Arabidopsis thaliana]
gi|17065568|gb|AAL32938.1| 26S proteasome ATPase subunit [Arabidopsis thaliana]
gi|23197722|gb|AAN15388.1| 26S proteasome ATPase subunit [Arabidopsis thaliana]
gi|297340301|gb|EFH70718.1| regulatory particle triple-a 1A [Arabidopsis lyrata subsp. lyrata]
gi|332194871|gb|AEE32992.1| regulatory particle triple-A 1A [Arabidopsis thaliana]
Length = 426
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 131/312 (41%), Positives = 181/312 (58%), Gaps = 37/312 (11%)
Query: 73 DEAIKSSEGFKPYY--VTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRM-LREELQLLQ 129
D A+ + G PY + K+E+ +A+K +L ++ L + L + Q++Q
Sbjct: 22 DIALLKTYGLGPYSAPIKKVEKEIKDLAKKINDLCGIKESDTGLAPPSQWDLVSDKQMMQ 81
Query: 130 E----QGSYVGEVVKP-MDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYT 184
E Q + +++ P + K ++ V KFVV + + D+ RV + Y
Sbjct: 82 EEQPLQVARCTKIISPNTEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQ 141
Query: 185 LHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQ 244
+ LP K+DP V++M VE+ PD TY VGG QI++++EV+ELP+ HPE F LGI
Sbjct: 142 IQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDP 201
Query: 245 PKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKK 304
PKGVL YGPPGTGKTLLARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 202 PKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKK 261
Query: 305 LAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTM 364
I+F DE+D+IG +R + G GGD+EVQRTM
Sbjct: 262 AC-----------------------------IVFFDEVDAIGGARFDDGVGGDNEVQRTM 292
Query: 365 LELLNQLDGFEA 376
LE++NQLDGF+A
Sbjct: 293 LEIVNQLDGFDA 304
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTLLARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 213 TGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSK 260
>gi|388581467|gb|EIM21775.1| 26S proteasome subunit P45 [Wallemia sebi CBS 633.66]
Length = 477
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 115/231 (49%), Positives = 149/231 (64%), Gaps = 29/231 (12%)
Query: 146 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
K ++ + KFVV + I DV RV + + Y + LP ++DP V++M VE+
Sbjct: 154 KYVIDIKHVAKFVVGLGDRIAPTDVEEGMRVGVDRQKYQIQIPLPPRIDPTVTMMQVEEK 213
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
PD TY VGG QI++++EV+ELP+ PE F+ LGI PKGVLLYGPPGTGKTL ARAV
Sbjct: 214 PDITYSDVGGCKEQIEKLREVVELPLLSPERFEKLGIDPPKGVLLYGPPGTGKTLCARAV 273
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTI 325
A+ T+ TFIRV GSELVQ+++GEG+RMVRELF MA K+
Sbjct: 274 ANRTDSTFIRVIGSELVQRYVGEGARMVRELFEMARSKR--------------------- 312
Query: 326 VCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
C IIF DE+D+IG +R + G+GGD+EVQRTMLEL+NQLDGF+A
Sbjct: 313 AC--------IIFFDEVDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDA 355
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ TFIRV GSELVQ+++GEG+RMVRELF MAR K
Sbjct: 264 TGKTLCARAVANRTDSTFIRVIGSELVQRYVGEGARMVRELFEMARSK 311
>gi|148910381|gb|ABR18268.1| unknown [Picea sitchensis]
Length = 425
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 132/312 (42%), Positives = 181/312 (58%), Gaps = 37/312 (11%)
Query: 73 DEAIKSSEGFKPYY--VTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRM-LREELQLLQ 129
D A+ + G PY + K E+ +A+K +L ++ L A + L + Q++Q
Sbjct: 21 DIALLKTYGLGPYSTSIKKAEKEIKEMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQ 80
Query: 130 E----QGSYVGEVVKP-MDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYT 184
E Q + +++ P + K ++ V KFVV + + D+ RV + Y
Sbjct: 81 EEQPLQVARCTKIINPNTEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYH 140
Query: 185 LHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQ 244
+ LP K+DP V++M VE+ PD TY VGG QI++++EV+ELP+ HPE F LGI
Sbjct: 141 IQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDP 200
Query: 245 PKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKK 304
PKGVL YGPPGTGKTLLARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 201 PKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKK 260
Query: 305 LAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTM 364
I+F DE+D+IG +R + G GGD+EVQRTM
Sbjct: 261 AC-----------------------------IVFFDEVDAIGGARFDDGLGGDNEVQRTM 291
Query: 365 LELLNQLDGFEA 376
LE++NQLDGF+A
Sbjct: 292 LEIVNQLDGFDA 303
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTLLARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 212 TGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSK 259
>gi|71033449|ref|XP_766366.1| 26S proteasome regulatory subunit 4 [Theileria parva strain Muguga]
gi|68353323|gb|EAN34083.1| 26S proteasome regulatory subunit 4, putative [Theileria parva]
Length = 415
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 114/242 (47%), Positives = 161/242 (66%), Gaps = 29/242 (11%)
Query: 135 VGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVD 194
VG + + +D+ +V ++ V+I +D + P C V L N++ ++ IL + VD
Sbjct: 84 VGTLEEIIDENHAIVTSSIGPEYYVNILSFVDKELLEPGCSVLLHNKTNSIVGILLDDVD 143
Query: 195 PLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPP 254
PLVS+M VEK P +Y+ +GGL+ QI+EIKE +ELP+ PEL+D +GI PKGV+LYGPP
Sbjct: 144 PLVSVMKVEKAPLESYDDIGGLEEQIQEIKEAVELPLTRPELYDDIGIKPPKGVILYGPP 203
Query: 255 GTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLF 314
GTGKTLLA+AVA+ T TF+RV GSEL+QK++GEG ++VRE+F +A
Sbjct: 204 GTGKTLLAKAVANETSATFLRVVGSELIQKYLGEGPKLVREMFKVAE------------- 250
Query: 315 WSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGF 374
++APSIIF+DEID+IG+ R ++ SGG+ E+QRTMLELLNQLDGF
Sbjct: 251 ----------------DNAPSIIFIDEIDAIGTKRYDATSGGEKEIQRTMLELLNQLDGF 294
Query: 375 EA 376
++
Sbjct: 295 DS 296
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 40/51 (78%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
+GKTLLA+AVA+ T TF+RV GSEL+QK++GEG ++VRE+F +A S
Sbjct: 205 TGKTLLAKAVANETSATFLRVVGSELIQKYLGEGPKLVREMFKVAEDNAPS 255
>gi|443896519|dbj|GAC73863.1| 26S proteasome regulatory complex [Pseudozyma antarctica T-34]
Length = 480
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 117/234 (50%), Positives = 150/234 (64%), Gaps = 29/234 (12%)
Query: 143 DKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMV 202
++ K ++ V KFVV + + + D+ RV + Y + LP K+DP V++M V
Sbjct: 154 EEDKYVINVKQIAKFVVSLGERVAPTDIEEGMRVGVDRTKYQIQIPLPPKIDPSVTMMQV 213
Query: 203 EKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 262
E+ PD TY VGG QI++++EV+ELP+ PE F LGI PKGVLLYGPPGTGKTL A
Sbjct: 214 EEKPDVTYGDVGGCKEQIEKLREVVELPLLSPERFVNLGIDPPKGVLLYGPPGTGKTLCA 273
Query: 263 RAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILT 322
RAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 274 RAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKK------------------ 315
Query: 323 NTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
C IIF DE+D+IG +R + G+GGD+EVQRTMLEL+NQLDGF+A
Sbjct: 316 ---AC--------IIFFDEVDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDA 358
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 267 TGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTK 314
>gi|383863989|ref|XP_003707462.1| PREDICTED: 26S protease regulatory subunit 4-like [Megachile
rotundata]
Length = 466
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 110/242 (45%), Positives = 156/242 (64%), Gaps = 29/242 (11%)
Query: 135 VGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVD 194
VG + + +D +V + V I +D + + P C V L ++ + + +L + D
Sbjct: 135 VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLGDDTD 194
Query: 195 PLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPP 254
P+V++M +EK P TY +GGLD QI+EIKE +ELP+ HPE ++ +GI PKGV+LYGPP
Sbjct: 195 PMVTVMKLEKAPQETYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPP 254
Query: 255 GTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLF 314
GTGKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 255 GTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAE------------- 301
Query: 315 WSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGF 374
EHAPSI+F+DEID++G+ R +S SGG+ E+QRTMLELLNQLDGF
Sbjct: 302 ----------------EHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGF 345
Query: 375 EA 376
++
Sbjct: 346 DS 347
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 256 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 300
>gi|325959942|ref|YP_004291408.1| proteasome-activating nucleotidase [Methanobacterium sp. AL-21]
gi|325331374|gb|ADZ10436.1| Proteasome-activating nucleotidase [Methanobacterium sp. AL-21]
Length = 410
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 126/315 (40%), Positives = 187/315 (59%), Gaps = 47/315 (14%)
Query: 80 EGFKPYYVTKIEELQL-IVAEKEQN----------LRRLQAQR----NE---LNAKVRML 121
E P + KIE+L+ I KE N +R+L+ + NE L+ +V+ L
Sbjct: 2 ENMSPNVLKKIEDLKKEIKILKEDNTKTKRNLMWKVRKLEKDKVLIENEKMRLDREVKSL 61
Query: 122 REELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNE 181
R E++ + + V + +D +V+VK FV+ + +D + P RVAL +
Sbjct: 62 RGEIERFRSPPLVIATVTEVLDDGRVVVKSSTGPNFVIGYSRFLDEKSLEPGVRVALNQQ 121
Query: 182 SYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALG 241
++++ +LP++ DPLV+ M V++ PD Y +GGL+ Q+ EIKE +ELP+K PELF +G
Sbjct: 122 TFSIVHVLPSEKDPLVTGMEVDEKPDVEYAQIGGLEEQVVEIKETVELPLKKPELFTNIG 181
Query: 242 IAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAS 301
I PKGVLLYGPPGTGKTLLA+AVAH T TFI++ SE V+K+IGEG+R+VR +F +A
Sbjct: 182 IEPPKGVLLYGPPGTGKTLLAKAVAHETNATFIKIVASEFVKKYIGEGARLVRGVFELA- 240
Query: 302 LKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQ 361
+E +PSIIF+DEID+I + R++S + GD EVQ
Sbjct: 241 ----------------------------KEKSPSIIFIDEIDAIAAKRLKSSTSGDREVQ 272
Query: 362 RTMLELLNQLDGFEA 376
RT+++LL ++DGFE
Sbjct: 273 RTLMQLLAEMDGFEG 287
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 40/51 (78%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
+GKTLLA+AVAH T TFI++ SE V+K+IGEG+R+VR +F +A+ K S
Sbjct: 196 TGKTLLAKAVAHETNATFIKIVASEFVKKYIGEGARLVRGVFELAKEKSPS 246
>gi|149622137|ref|XP_001521658.1| PREDICTED: 26S protease regulatory subunit 10B-like, partial
[Ornithorhynchus anatinus]
Length = 400
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 116/271 (42%), Positives = 162/271 (59%), Gaps = 29/271 (10%)
Query: 106 RLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNI 165
+L+ Q EL + +L+ LQ G VGEV+K + ++K +VK ++VV + +
Sbjct: 39 KLREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQL 98
Query: 166 DINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKE 225
D + + P RVAL + T+ + LP +VDPLV M E + +Y +GGL QI+E++E
Sbjct: 99 DKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELRE 158
Query: 226 VIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKF 285
VIELP+ +PELF +GI PKG LLYGPPGTGKTLLARAVA +C F++V S +V K+
Sbjct: 159 VIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKY 218
Query: 286 IGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSI 345
IGE +R++RE+F A R+H P IIFMDEID+I
Sbjct: 219 IGESARLIREMFNYA-----------------------------RDHQPCIIFMDEIDAI 249
Query: 346 GSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
G R G+ D E+QRT++ELLNQ+DGF+
Sbjct: 250 GGRRFSEGTSADREIQRTLMELLNQMDGFDT 280
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 35/46 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA +C F++V S +V K+IGE +R++RE+F AR
Sbjct: 189 TGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYAR 234
>gi|340371582|ref|XP_003384324.1| PREDICTED: 26S protease regulatory subunit 7-like [Amphimedon
queenslandica]
Length = 434
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 119/233 (51%), Positives = 146/233 (62%), Gaps = 29/233 (12%)
Query: 143 DKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMV 202
D K ++ V KFVV++ KN+ D+ RV + Y +H LP K+DP V++M V
Sbjct: 108 DHPKYVIHVKQFAKFVVNLHKNLAPTDIEEGMRVGVDRNKYEIHLPLPPKIDPTVTMMQV 167
Query: 203 EKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 262
E+ PD TY VGG QI+++KEV+E P+ HPE F LGI PKGVLL+GPPGTGKTL A
Sbjct: 168 EEKPDVTYGDVGGCKEQIEKLKEVVETPLLHPEKFVKLGIEPPKGVLLFGPPGTGKTLCA 227
Query: 263 RAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILT 322
RAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 228 RAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKK------------------ 269
Query: 323 NTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C IIF DEID+IG +R G G +EVQRTMLEL+NQLDGFE
Sbjct: 270 ---AC--------IIFFDEIDAIGGTRYSDGDGSSNEVQRTMLELINQLDGFE 311
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 221 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTK 268
>gi|15100181|ref|NP_150239.1| 26S protease regulatory subunit 7 [Rattus norvegicus]
gi|2492518|sp|Q63347.3|PRS7_RAT RecName: Full=26S protease regulatory subunit 7; AltName: Full=26S
proteasome AAA-ATPase subunit RPT1; AltName:
Full=Proteasome 26S subunit ATPase 2; AltName:
Full=Protein MSS1
gi|1395179|dbj|BAA09339.1| proteasomal ATPase (MSS1) [Rattus norvegicus]
Length = 433
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 115/230 (50%), Positives = 146/230 (63%), Gaps = 29/230 (12%)
Query: 146 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
K ++ V KFVVD+ + D+ RV + Y +H LP K+DP V++M VE+
Sbjct: 110 KYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEK 169
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
PD TY VGG QI++++EV+E P+ HPE F LGI PKGVLL+GPPGTGKTL ARAV
Sbjct: 170 PDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 229
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTI 325
A+ T+ FI V GSELVQK++GEG+RMVRELF MA KK
Sbjct: 230 ANRTDACFIPVIGSELVQKYVGEGARMVRELFEMARTKK--------------------- 268
Query: 326 VCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C +IF DEID+IG +R + G+GGD+EVQRTMLEL+NQLDGF+
Sbjct: 269 AC--------LIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFD 310
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 40/48 (83%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FI V GSELVQK++GEG+RMVRELF MAR K
Sbjct: 220 TGKTLCARAVANRTDACFIPVIGSELVQKYVGEGARMVRELFEMARTK 267
>gi|385302411|gb|EIF46543.1| 26s protease regulatory subunit 7 [Dekkera bruxellensis AWRI1499]
Length = 397
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 114/236 (48%), Positives = 151/236 (63%), Gaps = 29/236 (12%)
Query: 140 KPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSL 199
+P +K K ++ + KFVV + + + D+ RV + + Y + LP ++DP V++
Sbjct: 68 EPDEKSKYVINIKQIAKFVVGLGERVSPTDIEEGMRVGVDRQKYHIELPLPPRIDPTVTM 127
Query: 200 MMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKT 259
M VE+ PD TY +GG QI++++EV+ELP+ PE F LGI PKG+LLYGPPGTGKT
Sbjct: 128 MTVEEKPDVTYSDIGGCKEQIEKLREVVELPLLSPERFAKLGIDPPKGILLYGPPGTGKT 187
Query: 260 LLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLT 319
L ARAVA+ TE TFIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 188 LCARAVANRTEATFIRVIGSELVQKYVGEGARMVRELFEMARRKK--------------- 232
Query: 320 ILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C IIF DE+D+IG +R + G+GGD+EVQRTMLEL+ QLDGF+
Sbjct: 233 ------AC--------IIFFDEVDAIGGARFDDGAGGDNEVQRTMLELITQLDGFD 274
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/48 (77%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ TE TFIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 184 TGKTLCARAVANRTEATFIRVIGSELVQKYVGEGARMVRELFEMARRK 231
>gi|198285461|gb|ACH85269.1| proteasome (prosome, macropain) 26S subunit, ATPase 1a [Salmo
salar]
Length = 438
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 119/276 (43%), Positives = 168/276 (60%), Gaps = 29/276 (10%)
Query: 101 EQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVD 160
E+ R Q Q L K R ++ L+ VG + + +D +V + V
Sbjct: 73 EEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGNLEEIIDDNHAIVSTSVGSEHYVS 132
Query: 161 IDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQI 220
I +D + + P C V L ++ + + +L + DPLV++M VEK P TY +GGLD+QI
Sbjct: 133 ILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDSQI 192
Query: 221 KEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSE 280
+EIKE +ELP+ HPE ++ +GI PKGV+LYG PGTGKTLLA+AVA+ T TF+RV GSE
Sbjct: 193 QEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSE 252
Query: 281 LVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMD 340
L+QK++G+G ++VRELF +A EHAPSI+F+D
Sbjct: 253 LIQKYLGDGPKLVRELFRVAE-----------------------------EHAPSIVFID 283
Query: 341 EIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
EID+IG+ R +S SGG+ E+QRT+LELLNQLDGF++
Sbjct: 284 EIDAIGTKRYDSNSGGEREIQRTLLELLNQLDGFDS 319
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 228 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 272
>gi|344232112|gb|EGV63991.1| hypothetical protein CANTEDRAFT_130346 [Candida tenuis ATCC 10573]
gi|344232113|gb|EGV63992.1| 26S proteasome subunit P45 [Candida tenuis ATCC 10573]
Length = 441
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 113/254 (44%), Positives = 161/254 (63%), Gaps = 29/254 (11%)
Query: 122 REELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNE 181
RE L L+ VG + + +D +V ++ V I +D + P C V L ++
Sbjct: 97 RENLDELRGYPMSVGNLEEIIDDDHAIVSSTAGSEYYVSIMSFVDKGLLEPGCTVLLHHK 156
Query: 182 SYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALG 241
+ + +L + DP+VS+M ++K P TY +GGL+ QI+EIKE +ELP+ HPEL++ +G
Sbjct: 157 TVAIVGVLQDDADPMVSVMKLDKSPTETYADIGGLEAQIQEIKEAVELPLTHPELYEEMG 216
Query: 242 IAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAS 301
I PKGV+LYG PGTGKTLLA+AVA+ T TF+R+ GSEL+QK++G+G R+VR++F +A+
Sbjct: 217 IKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPRLVRQIFQVAA 276
Query: 302 LKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQ 361
EHAPSI+F+DEID+IG+ R ES SGG+ E+Q
Sbjct: 277 -----------------------------EHAPSIVFIDEIDAIGTKRYESSSGGEREIQ 307
Query: 362 RTMLELLNQLDGFE 375
RTMLELLNQLDGF+
Sbjct: 308 RTMLELLNQLDGFD 321
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+R+ GSEL+QK++G+G R+VR++F +A
Sbjct: 231 TGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPRLVRQIFQVA 275
>gi|223648476|gb|ACN10996.1| 26S protease regulatory subunit 4 [Salmo salar]
Length = 440
Score = 221 bits (564), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 119/276 (43%), Positives = 168/276 (60%), Gaps = 29/276 (10%)
Query: 101 EQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVD 160
E+ R Q Q L K R ++ L+ VG + + +D +V + V
Sbjct: 75 EEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGNLEEIIDDNHAIVSTSVGSEHYVS 134
Query: 161 IDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQI 220
I +D + + P C V L ++ + + +L + DPLV++M VEK P TY +GGLD+QI
Sbjct: 135 ILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDSQI 194
Query: 221 KEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSE 280
+EIKE +ELP+ HPE ++ +GI PKGV+LYG PGTGKTLLA+AVA+ T TF+RV GSE
Sbjct: 195 QEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSE 254
Query: 281 LVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMD 340
L+QK++G+G ++VRELF +A EHAPSI+F+D
Sbjct: 255 LIQKYLGDGPKLVRELFRVAE-----------------------------EHAPSIVFID 285
Query: 341 EIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
EID+IG+ R +S SGG+ E+QRT+LELLNQLDGF++
Sbjct: 286 EIDAIGTKRYDSNSGGEREIQRTLLELLNQLDGFDS 321
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 230 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 274
>gi|355745594|gb|EHH50219.1| hypothetical protein EGM_01010, partial [Macaca fascicularis]
Length = 392
Score = 221 bits (564), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 116/278 (41%), Positives = 164/278 (58%), Gaps = 29/278 (10%)
Query: 99 EKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFV 158
E + L+ L+ Q EL + +L+ LQ G VGEV+K + +K +VK ++V
Sbjct: 24 EIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTAEKFIVKATNGPRYV 83
Query: 159 VDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDN 218
V + +D + + P RVAL + T+ + LP +VDPLV M E + +Y +GGL
Sbjct: 84 VGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVCNMSHEDPGNVSYSEIGGLSE 143
Query: 219 QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSG 278
QI+E++EVIELP+ +PELF +GI PKG LLYGPPGTGKTLLARA+A +C F++V
Sbjct: 144 QIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAIASQLDCNFLKVVS 203
Query: 279 SELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIF 338
S +V K+IGE +R++RE+F A R+H P IIF
Sbjct: 204 SSIVDKYIGESARLIREMFNYA-----------------------------RDHQPCIIF 234
Query: 339 MDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
MDEID+IG R G+ D E+QRT+++LLNQ+DGF+
Sbjct: 235 MDEIDAIGGRRFSEGTSADREIQRTLMDLLNQMDGFDT 272
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 35/46 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARA+A +C F++V S +V K+IGE +R++RE+F AR
Sbjct: 181 TGKTLLARAIASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYAR 226
>gi|121705070|ref|XP_001270798.1| proteasome regulatory particle subunit Rpt1, putative [Aspergillus
clavatus NRRL 1]
gi|119398944|gb|EAW09372.1| proteasome regulatory particle subunit Rpt1, putative [Aspergillus
clavatus NRRL 1]
Length = 439
Score = 221 bits (564), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 117/237 (49%), Positives = 149/237 (62%), Gaps = 29/237 (12%)
Query: 140 KPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSL 199
K DK K ++ V KFVV++ + + D+ RV + Y + LP K+DP V++
Sbjct: 110 KDPDKSKYVINVKQIAKFVVNLGERVSPTDIEEGMRVGVDRNKYQIMLPLPPKIDPSVTM 169
Query: 200 MMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKT 259
M VE PD TY VGG QI++++EV+E+P+ PE F LGI PKG LLYGPPGTGKT
Sbjct: 170 MTVEDKPDVTYGDVGGCKEQIEKLREVVEMPLLSPERFVNLGIDPPKGALLYGPPGTGKT 229
Query: 260 LLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLT 319
L ARAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 230 LCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKK--------------- 274
Query: 320 ILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
C IIF DEID++G +R + G+GGD+EVQRTMLEL+ QLDGF+A
Sbjct: 275 ------AC--------IIFFDEIDAVGGARFDDGAGGDNEVQRTMLELITQLDGFDA 317
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 226 TGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTK 273
>gi|336121896|ref|YP_004576671.1| proteasome-activating nucleotidase [Methanothermococcus okinawensis
IH1]
gi|334856417|gb|AEH06893.1| Proteasome-activating nucleotidase [Methanothermococcus okinawensis
IH1]
Length = 408
Score = 221 bits (564), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 127/308 (41%), Positives = 190/308 (61%), Gaps = 34/308 (11%)
Query: 71 DVDEAIKSS-EGFK-PYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLL 128
DV+E K + E FK YV ++E L + + ++L R AQ L + +L+ EL L
Sbjct: 10 DVEEKNKVNIEEFKEKTYVAELESKVLRMELENRDLNRENAQ---LKKENEILKRELDKL 66
Query: 129 QEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKI 188
+ +G V+ ++ +KV+VK F+V I ++ +++ P RV L ++ + I
Sbjct: 67 RIPPLILGTVIDRVEDRKVVVKSSTGPSFLVTISNFVNKDEIVPGARVCLNQQTLAIVDI 126
Query: 189 LPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGV 248
LP + D M V++ P+ ++ +GGL+ QIKE+KEV+ELP+ HPELF+ +GI PKGV
Sbjct: 127 LPKEKDYRAMAMEVDERPNISFSDIGGLEEQIKEVKEVVELPLTHPELFEKVGIEPPKGV 186
Query: 249 LLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFA 308
LLYGPPGTGKTLLA+AVAH T +FI++ GSELV+KFIGEG+++V+++F +A
Sbjct: 187 LLYGPPGTGKTLLAKAVAHETNASFIKIVGSELVKKFIGEGAKLVKDVFKLA-------- 238
Query: 309 HHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELL 368
+E AP IIF+DEID++ S R ES +GGD EVQRT+++LL
Sbjct: 239 ---------------------KEKAPCIIFIDEIDAVASRRTESLTGGDREVQRTLMQLL 277
Query: 369 NQLDGFEA 376
++DGFE+
Sbjct: 278 AEMDGFES 285
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 42/49 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKG 60
+GKTLLA+AVAH T +FI++ GSELV+KFIGEG+++V+++F +A+ K
Sbjct: 194 TGKTLLAKAVAHETNASFIKIVGSELVKKFIGEGAKLVKDVFKLAKEKA 242
>gi|443709650|gb|ELU04242.1| hypothetical protein CAPTEDRAFT_149757 [Capitella teleta]
Length = 393
Score = 221 bits (564), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 118/278 (42%), Positives = 164/278 (58%), Gaps = 29/278 (10%)
Query: 99 EKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFV 158
E E L+ ++ Q +L + +L+ LQ G VGEV+K + + K +VK ++V
Sbjct: 25 ELEARLKEMREQLKDLTKQYDKSENDLKALQSVGQIVGEVLKQLSEDKFIVKATNGPRYV 84
Query: 159 VDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDN 218
V + ID + + RVAL + T+ + LP +VDPLV M +E D Y +GGL
Sbjct: 85 VGCRRQIDKSKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSIEDPGDIGYSAIGGLGE 144
Query: 219 QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSG 278
QI+E++EVIELP+ +PELF+ +GI PKG LLYGPPGTGKTLLARAVA + F++V
Sbjct: 145 QIRELREVIELPLLNPELFERVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVS 204
Query: 279 SELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIF 338
S +V K+IGE +R++RE+F A R+H P IIF
Sbjct: 205 SAIVDKYIGESARLIREMFGYA-----------------------------RDHQPCIIF 235
Query: 339 MDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
MDEID+IG R G+ D E+QRT++ELLNQ+DGF+A
Sbjct: 236 MDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDA 273
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 34/46 (73%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA + F++V S +V K+IGE +R++RE+F AR
Sbjct: 182 TGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFGYAR 227
>gi|84998430|ref|XP_953936.1| 26S proteasome subunit 4 [Theileria annulata]
gi|65304934|emb|CAI73259.1| 26S proteasome subunit 4, putative [Theileria annulata]
Length = 438
Score = 221 bits (564), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 114/242 (47%), Positives = 161/242 (66%), Gaps = 29/242 (11%)
Query: 135 VGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVD 194
VG + + +D+ +V ++ V+I +D + P C V L N++ ++ IL + VD
Sbjct: 107 VGTLEEIIDENHAIVTSSIGPEYYVNILSFVDKELLEPGCSVLLHNKTNSIVGILLDDVD 166
Query: 195 PLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPP 254
PLVS+M VEK P +Y+ +GGL+ QI+EIKE +ELP+ PEL+D +GI PKGV+LYGPP
Sbjct: 167 PLVSVMKVEKAPLESYDDIGGLEEQIQEIKEAVELPLTRPELYDDIGIKPPKGVILYGPP 226
Query: 255 GTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLF 314
GTGKTLLA+AVA+ T TF+RV GSEL+QK++GEG ++VRE+F +A
Sbjct: 227 GTGKTLLAKAVANETSATFLRVVGSELIQKYLGEGPKLVREMFKVAE------------- 273
Query: 315 WSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGF 374
++APSIIF+DEID+IG+ R ++ SGG+ E+QRTMLELLNQLDGF
Sbjct: 274 ----------------DNAPSIIFIDEIDAIGTKRYDATSGGEKEIQRTMLELLNQLDGF 317
Query: 375 EA 376
++
Sbjct: 318 DS 319
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 40/51 (78%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
+GKTLLA+AVA+ T TF+RV GSEL+QK++GEG ++VRE+F +A S
Sbjct: 228 TGKTLLAKAVANETSATFLRVVGSELIQKYLGEGPKLVREMFKVAEDNAPS 278
>gi|403257095|ref|XP_003921172.1| PREDICTED: 26S protease regulatory subunit 7 [Saimiri boliviensis
boliviensis]
Length = 433
Score = 221 bits (564), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 115/230 (50%), Positives = 146/230 (63%), Gaps = 29/230 (12%)
Query: 146 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
K ++ V KFVVD+ + D+ RV + Y +H LP K+DP V++M VE+
Sbjct: 110 KYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEK 169
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
PD TY VGG QI++++EV+E P+ HPE F LGI PKGVLL+GPPGTGKTL A AV
Sbjct: 170 PDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCAWAV 229
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTI 325
A+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 230 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKK--------------------- 268
Query: 326 VCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C +IF DEID+IG +R + G+GGD+EVQRTMLEL+NQLDGF+
Sbjct: 269 AC--------LIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFD 310
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 40/48 (83%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL A AVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 220 TGKTLCAWAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTK 267
>gi|315230714|ref|YP_004071150.1| proteasome-activating AAA-ATPase [Thermococcus barophilus MP]
gi|315183742|gb|ADT83927.1| proteasome-activating AAA-ATPase [Thermococcus barophilus MP]
Length = 398
Score = 221 bits (564), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 119/305 (39%), Positives = 186/305 (60%), Gaps = 33/305 (10%)
Query: 71 DVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQE 130
D+++ +KS + + Y + L+ + + E +R L+A + L ++ LR E+ L++
Sbjct: 3 DINDVVKSHDEYDDYIIY----LKRRIRQLELQVRTLEADKERLERELSRLRMEMSRLRQ 58
Query: 131 QGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILP 190
++ G +++ +D + +V+ + +FVV I I+ + P RVAL + + +ILP
Sbjct: 59 PPAFAGTLLEILDDDRAIVQNYNGPRFVVRIAPWIEKEKLKPGSRVALDQRTMAVVEILP 118
Query: 191 NKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLL 250
+ DP V V P+ TY+ +GGL Q++E++E +ELP+KHPELF+ +GI PKGVLL
Sbjct: 119 SPKDPSVLGFEVIDRPNVTYDDIGGLKKQLQELREAVELPLKHPELFEKVGIEPPKGVLL 178
Query: 251 YGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHH 310
YGPPG GKTL+A+A+A TFIRV GSELV+K+IGEG+R+V ELF +A
Sbjct: 179 YGPPGCGKTLMAKALAREVNATFIRVVGSELVRKYIGEGARLVHELFELA---------- 228
Query: 311 PLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQ 370
+E AP+IIF+DEID+IG+ R+E +GG+ EV RT+++LL +
Sbjct: 229 -------------------KEKAPTIIFIDEIDAIGAKRLEETTGGEREVNRTLMQLLAE 269
Query: 371 LDGFE 375
LDGF+
Sbjct: 270 LDGFD 274
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 39/50 (78%)
Query: 13 GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
GKTL+A+A+A TFIRV GSELV+K+IGEG+R+V ELF +A+ K +
Sbjct: 185 GKTLMAKALAREVNATFIRVVGSELVRKYIGEGARLVHELFELAKEKAPT 234
>gi|156086888|ref|XP_001610851.1| 26S protease regulatory subunit 4 [Babesia bovis T2Bo]
gi|154798104|gb|EDO07283.1| 26S protease regulatory subunit 4, putative [Babesia bovis]
Length = 438
Score = 221 bits (564), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 125/287 (43%), Positives = 181/287 (63%), Gaps = 33/287 (11%)
Query: 89 KIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVL 148
+I++ L+ E N RL +N+ + +LR L+ L+ VG + + +D +
Sbjct: 65 RIKDYLLLEEEYVANKIRLNPTKNK--NQDDLLR--LEDLRGSPMSVGTMEEMIDDNHAI 120
Query: 149 VKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDS 208
V ++ V+I +D + P C V L N++ ++ IL + +DPLVSLM VE+ P
Sbjct: 121 VTSSMGPEYYVNILSFVDKTLLEPGCSVLLHNKTNSVVGILLDAIDPLVSLMKVERAPLE 180
Query: 209 TYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH 268
+Y +GGL++QI+EIKE +ELP+ HPEL++ +GI PKGV+LYGPPGTGKTLLA+AVA+
Sbjct: 181 SYSDIGGLEDQIQEIKEAVELPLTHPELYEEVGIRPPKGVILYGPPGTGKTLLAKAVANE 240
Query: 269 TECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCN 328
T TF+RV GSEL+QK++GEG ++VRE+F +A
Sbjct: 241 TCATFLRVVGSELIQKYLGEGPKLVREMFRVAE--------------------------- 273
Query: 329 FREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
E+APSIIF+DEID+IG+ R ++ SGG+ E+QRTMLELLNQLDGF+
Sbjct: 274 --ENAPSIIFIDEIDAIGTKRYDATSGGEKEIQRTMLELLNQLDGFD 318
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++GEG ++VRE+F +A
Sbjct: 228 TGKTLLAKAVANETCATFLRVVGSELIQKYLGEGPKLVREMFRVA 272
>gi|145550951|ref|XP_001461153.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124428986|emb|CAK93780.1| unnamed protein product [Paramecium tetraurelia]
Length = 393
Score = 221 bits (564), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 123/296 (41%), Positives = 173/296 (58%), Gaps = 38/296 (12%)
Query: 91 EELQLI--VAEKEQNLRRLQAQRNELNAKVRML-------REELQLLQEQGSYVGEVVKP 141
EEL+L + KEQ L L Q L + L REEL+ +Q VG +
Sbjct: 11 EELELFKQLKLKEQELEYLDIQEQYLKDDQKRLKRELVRSREELKRIQAVPLTVGHFNEM 70
Query: 142 MDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMM 201
M++ L+ + V + +D + PN +AL S+++ ILP + D + +M
Sbjct: 71 MNENYALINSNGGATLYVRVLSTLDREKLKPNTSIALHRHSHSVVDILPTETDSSIQMMH 130
Query: 202 VEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLL 261
V + PD +Y+ +GGLD Q +EIKE IELP+ PEL+ +GI P+GVLLYGPPGTGKT++
Sbjct: 131 VTEKPDVSYQDIGGLDQQKQEIKEAIELPLSCPELYRQIGIDPPRGVLLYGPPGTGKTMI 190
Query: 262 ARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTIL 321
A+AVAHHT +FIRV GSE VQK++GEG RMVR++F +A
Sbjct: 191 AKAVAHHTTASFIRVVGSEFVQKYLGEGPRMVRDVFRLA--------------------- 229
Query: 322 TNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEAT 377
RE+APSIIF+DE+DSI + R ++ +G D EVQR ++ELLNQ+DGF+ +
Sbjct: 230 --------RENAPSIIFIDEVDSIATKRFDAQTGADREVQRILIELLNQMDGFDQS 277
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 41/51 (80%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
+GKT++A+AVAHHT +FIRV GSE VQK++GEG RMVR++F +AR S
Sbjct: 185 TGKTMIAKAVAHHTTASFIRVVGSEFVQKYLGEGPRMVRDVFRLARENAPS 235
>gi|284162725|ref|YP_003401348.1| 26S proteasome subunit P45 family [Archaeoglobus profundus DSM
5631]
gi|284012722|gb|ADB58675.1| 26S proteasome subunit P45 family [Archaeoglobus profundus DSM
5631]
Length = 407
Score = 221 bits (564), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 113/252 (44%), Positives = 161/252 (63%), Gaps = 29/252 (11%)
Query: 124 ELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESY 183
E++ L+ +G + +D +V+VK KF+V + + +D D+ P RVA+ ++
Sbjct: 64 EIERLRSPPLLIGTISDVLDDGRVIVKSSTGPKFLVHVSQFVDPKDLKPGARVAMNQQTL 123
Query: 184 TLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIA 243
+ +LP DP+V VE+ P+ TYE +GGL+ QI+EI+E IELP+ PELF+ +GI
Sbjct: 124 AVVSVLPPSKDPMVYAFEVEERPNVTYEDIGGLEKQIEEIREAIELPLLKPELFEEVGIE 183
Query: 244 QPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLK 303
PKGVLLYGPPGTGKTLLA+AVA+ T+ TFIRV GSE VQK+IGEG+R+VRE+F +A
Sbjct: 184 PPKGVLLYGPPGTGKTLLAKAVANKTKATFIRVVGSEFVQKYIGEGARLVREVFELA--- 240
Query: 304 KLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRT 363
RE +PSIIF+DE+D+I + R S + GD EVQRT
Sbjct: 241 --------------------------REKSPSIIFIDELDAIAARRTSSDTSGDREVQRT 274
Query: 364 MLELLNQLDGFE 375
+++LL ++DGF+
Sbjct: 275 LMQLLAEMDGFD 286
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 43/51 (84%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
+GKTLLA+AVA+ T+ TFIRV GSE VQK+IGEG+R+VRE+F +AR K S
Sbjct: 196 TGKTLLAKAVANKTKATFIRVVGSEFVQKYIGEGARLVREVFELAREKSPS 246
>gi|384484678|gb|EIE76858.1| 26S protease regulatory subunit 7 [Rhizopus delemar RA 99-880]
Length = 435
Score = 221 bits (564), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 116/230 (50%), Positives = 148/230 (64%), Gaps = 29/230 (12%)
Query: 146 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
K ++ V KFVV++ +++ D+ RV + Y + LP K+DP V++M VE+
Sbjct: 112 KYVINVKQIAKFVVELVRHVSPTDIEEGMRVGVDRTKYQIQIPLPPKIDPSVTMMQVEEK 171
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
PD TY VGG QI+ ++EV+ELP+ PE F LGI PKGVLLYGPPGTGKTL ARAV
Sbjct: 172 PDVTYSDVGGCKEQIERLREVVELPLLQPERFVNLGIDPPKGVLLYGPPGTGKTLCARAV 231
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTI 325
A+ T+ TFIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 232 ANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKK--------------------- 270
Query: 326 VCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C IIF DE+D+IG +R + G+GGD+EVQRTMLEL+NQLDGF+
Sbjct: 271 AC--------IIFFDEVDAIGGARFDDGAGGDNEVQRTMLELINQLDGFD 312
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 222 TGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTK 269
>gi|449278480|gb|EMC86302.1| 26S protease regulatory subunit S10B, partial [Columba livia]
Length = 361
Score = 221 bits (564), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 116/270 (42%), Positives = 161/270 (59%), Gaps = 29/270 (10%)
Query: 107 LQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNID 166
++ Q EL + +L+ LQ G VGEV+K + ++K +VK ++VV + +D
Sbjct: 1 VREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLD 60
Query: 167 INDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEV 226
+ + P RVAL + T+ + LP +VDPLV M E D +Y +GGL QI+E++EV
Sbjct: 61 KSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDVSYSEIGGLSEQIRELREV 120
Query: 227 IELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFI 286
IELP+ +PELF +GI PKG LLYGPPGTGKTLLARAVA +C F++V S +V K+I
Sbjct: 121 IELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYI 180
Query: 287 GEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIG 346
GE +R++RE+F A R+H P IIFMDEID+IG
Sbjct: 181 GESARLIREMFNYA-----------------------------RDHQPCIIFMDEIDAIG 211
Query: 347 SSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
R G+ D E+QRT++ELLNQ+DGF+
Sbjct: 212 GRRFSEGTSADREIQRTLMELLNQMDGFDT 241
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 35/46 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA +C F++V S +V K+IGE +R++RE+F AR
Sbjct: 150 TGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYAR 195
>gi|193617698|ref|XP_001948523.1| PREDICTED: 26S protease regulatory subunit 4-like [Acyrthosiphon
pisum]
Length = 440
Score = 221 bits (564), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 110/242 (45%), Positives = 156/242 (64%), Gaps = 29/242 (11%)
Query: 135 VGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVD 194
VG + + +D +V + V I +D + + P C V L ++ + + +L + D
Sbjct: 109 VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTD 168
Query: 195 PLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPP 254
P+V++M +EK P TY +GGLD QI+EIKE +ELP+ HPE ++ +GI PKGV+LYGPP
Sbjct: 169 PMVTVMKLEKAPQETYGDIGGLDQQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPP 228
Query: 255 GTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLF 314
GTGKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 229 GTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAE------------- 275
Query: 315 WSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGF 374
EHAPSI+F+DEID++G+ R +S SGG+ E+QRTMLELLNQLDGF
Sbjct: 276 ----------------EHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGF 319
Query: 375 EA 376
++
Sbjct: 320 DS 321
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 230 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 274
>gi|378733123|gb|EHY59582.1| 26S protease regulatory subunit 7 [Exophiala dermatitidis
NIH/UT8656]
Length = 439
Score = 221 bits (564), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 116/237 (48%), Positives = 151/237 (63%), Gaps = 29/237 (12%)
Query: 140 KPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSL 199
K +K K ++ V KFVV++ + + D+ RV + + Y++ LP K+DP V++
Sbjct: 110 KDPEKSKYVINVKQIAKFVVNLGERVSPTDIEEGMRVGVDRQKYSIMLPLPPKIDPSVTM 169
Query: 200 MMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKT 259
M VE PD TY VGG QI++++EV+E+P+ PE F LGI PKG LLYGPPGTGKT
Sbjct: 170 MTVEDKPDVTYGDVGGCKEQIEKLREVVEMPLLSPERFVNLGIDPPKGALLYGPPGTGKT 229
Query: 260 LLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLT 319
L ARAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 230 LCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKK--------------- 274
Query: 320 ILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
C IIF DEID+IG +R + G+GGD+EVQRTMLEL+ QLDGF++
Sbjct: 275 ------AC--------IIFFDEIDAIGGARFDDGAGGDNEVQRTMLELITQLDGFDS 317
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 226 TGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTK 273
>gi|168040186|ref|XP_001772576.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676131|gb|EDQ62618.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 425
Score = 221 bits (564), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 128/312 (41%), Positives = 181/312 (58%), Gaps = 37/312 (11%)
Query: 73 DEAIKSSEGFKPY--YVTKIEELQLIVAEKEQNLRRLQAQRNELN--AKVRMLREELQLL 128
D A+ + G PY + + E+ ++A+K +L ++ L ++ ++ ++ +
Sbjct: 21 DIALLKTYGLGPYANLIKRTEKDIKVMAKKVNDLCGIKESDTGLAVPSQWDLVSDKQMMQ 80
Query: 129 QEQGSYVGEVVKPM----DKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYT 184
+EQ V K + D K ++ V KFVV + + + D+ RV + Y
Sbjct: 81 EEQPLQVARCTKIINANTDDSKYVINVKQIAKFVVGLGEKVSPTDIEEGMRVGVDRNKYQ 140
Query: 185 LHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQ 244
+ LP K+DP V++M VE+ PD TY +GG QI++++EV+ELP+ HPE F LGI
Sbjct: 141 IQIPLPPKIDPSVTMMTVEEKPDVTYNDIGGCKEQIEKMREVVELPMLHPEKFVKLGIDP 200
Query: 245 PKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKK 304
PKGVL YGPPGTGKTLLARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 201 PKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKK 260
Query: 305 LAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTM 364
I+F DE+D+IG +R + G GGD+EVQRTM
Sbjct: 261 AC-----------------------------IVFFDEVDAIGGARFDDGLGGDNEVQRTM 291
Query: 365 LELLNQLDGFEA 376
LE++NQLDGF+A
Sbjct: 292 LEIVNQLDGFDA 303
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTLLARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 212 TGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSK 259
>gi|346469169|gb|AEO34429.1| hypothetical protein [Amblyomma maculatum]
Length = 444
Score = 221 bits (564), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 118/288 (40%), Positives = 176/288 (61%), Gaps = 33/288 (11%)
Query: 89 KIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVL 148
+I++ L+ E +N RL+ Q + + R ++ L+ VG + + +D +
Sbjct: 71 RIKDYLLLEDEFLRNQERLKPQEEKHEEE----RSKVDDLRGSPMSVGTLEEIIDDSHAI 126
Query: 149 VKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDS 208
V + V + +D + + P C V L ++ + + +L + DP+V++M +EK P
Sbjct: 127 VSTSVGSEHYVSMLSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDADPMVAVMKLEKAPQE 186
Query: 209 TYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH 268
TY +GGLD QI+EIKE +ELP+ HPE ++ +GI PKGV+LYGPPGTGKTLLA+AVA+
Sbjct: 187 TYADIGGLDQQIQEIKESVELPLTHPEYYEEMGIRPPKGVILYGPPGTGKTLLAKAVANQ 246
Query: 269 TECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCN 328
T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 247 TSATFLRVVGSELIQKYLGDGPKLVRELFRVAE--------------------------- 279
Query: 329 FREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
EHAPSI+F+DEID++G+ R +S SGG+ E+QRTMLELLNQLDGF++
Sbjct: 280 --EHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDS 325
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 234 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 278
>gi|356551906|ref|XP_003544313.1| PREDICTED: 26S protease regulatory subunit 10B homolog A-like
isoform 2 [Glycine max]
Length = 335
Score = 221 bits (564), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 116/280 (41%), Positives = 166/280 (59%), Gaps = 43/280 (15%)
Query: 110 QRNELNAKVRMLRE--------------ELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEG 155
Q EL ++VR +RE +L+ LQ G +GEV++P+D ++++VK
Sbjct: 24 QHKELESRVRSVRENLRASKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGP 83
Query: 156 KFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGG 215
++VV +D +T RV L + T+ + LP +VDP+V M+ E + +Y VGG
Sbjct: 84 RYVVGCRSKVDKEKLTAGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNISYSAVGG 143
Query: 216 LDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIR 275
L +QI+E++E IELP+ +PELF +GI PKGVLLYGPPGTGKTLLARA+A + E F++
Sbjct: 144 LSDQIRELRESIELPLMNPELFIRVGIKPPKGVLLYGPPGTGKTLLARAIASNIEANFLK 203
Query: 276 VSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPS 335
V S ++ K+IGE +R++RE+F A R+H P
Sbjct: 204 VVSSAIIDKYIGESARLIREMFGYA-----------------------------RDHQPC 234
Query: 336 IIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
IIFMDEID+IG R G+ D E+QRT++ELLNQLDGF+
Sbjct: 235 IIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFD 274
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 35/46 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARA+A + E F++V S ++ K+IGE +R++RE+F AR
Sbjct: 184 TGKTLLARAIASNIEANFLKVVSSAIIDKYIGESARLIREMFGYAR 229
>gi|260836933|ref|XP_002613460.1| hypothetical protein BRAFLDRAFT_119863 [Branchiostoma floridae]
gi|229298845|gb|EEN69469.1| hypothetical protein BRAFLDRAFT_119863 [Branchiostoma floridae]
Length = 441
Score = 221 bits (564), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 118/288 (40%), Positives = 176/288 (61%), Gaps = 33/288 (11%)
Query: 89 KIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVL 148
+I++ L+ E +N RL+ Q + +V R ++ L+ VG + + +D +
Sbjct: 68 RIKDYMLMEEEFIRNQERLKPQ----DERVEEERSKVDDLRGSPMSVGSLEEIIDDNHAI 123
Query: 149 VKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDS 208
V + V I +D + + P C V + ++ + + +L + DP+V++M +EK P
Sbjct: 124 VSTSVGSEHYVSILSFVDKDQLEPGCSVLMNHKVHAIVGVLGDDTDPMVTVMKLEKAPKE 183
Query: 209 TYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH 268
+Y +GGLD QI+EIKE +ELP+ HPE ++ +GI PKGV+LYG PGTGKTLLA+AVA+
Sbjct: 184 SYADIGGLDQQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQ 243
Query: 269 TECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCN 328
T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 244 TSATFLRVVGSELIQKYLGDGPKLVRELFRVAE--------------------------- 276
Query: 329 FREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
EHAPSI+F+DEID++G+ R ES SGG+ E+QRTMLELLNQLDGF++
Sbjct: 277 --EHAPSIVFIDEIDAVGTKRYESNSGGEREIQRTMLELLNQLDGFDS 322
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 231 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 275
>gi|70991445|ref|XP_750571.1| proteasome regulatory particle subunit Rpt4 [Aspergillus fumigatus
Af293]
gi|66848204|gb|EAL88533.1| proteasome regulatory particle subunit Rpt4, putative [Aspergillus
fumigatus Af293]
gi|159124127|gb|EDP49245.1| proteasome regulatory particle subunit Rpt4, putative [Aspergillus
fumigatus A1163]
Length = 393
Score = 221 bits (564), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 117/277 (42%), Positives = 168/277 (60%), Gaps = 29/277 (10%)
Query: 99 EKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFV 158
E E L+ L+ +L + + E ++ LQ G +GEV+K +D+++ +VK ++V
Sbjct: 25 EWEAKLKNLRMGIKDLQREFDISEENIKALQSVGQIIGEVLKQLDEERFIVKASSGPRYV 84
Query: 159 VDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDN 218
V +D + + RVAL + T+ ++LP +VDPLV M +E ++ +GGL++
Sbjct: 85 VGCRSKVDKSKLKQGTRVALDMTTLTIMRMLPREVDPLVYNMSLEDPGQISFAGIGGLND 144
Query: 219 QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSG 278
QI+E++EVIELP+K+PELF +GI PKGVLLYGPPGTGKTLLARAVA E F++V
Sbjct: 145 QIRELREVIELPLKNPELFQRVGIKPPKGVLLYGPPGTGKTLLARAVASSMETNFLKVVS 204
Query: 279 SELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIF 338
S +V K+IGE +R++RE+F A +EH P IIF
Sbjct: 205 SAIVDKYIGESARLIREMFGYA-----------------------------KEHEPCIIF 235
Query: 339 MDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
MDEID+IG R G+ D E+QRT++ELLNQLDGF+
Sbjct: 236 MDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFD 272
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 34/46 (73%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA E F++V S +V K+IGE +R++RE+F A+
Sbjct: 182 TGKTLLARAVASSMETNFLKVVSSAIVDKYIGESARLIREMFGYAK 227
>gi|425765575|gb|EKV04246.1| hypothetical protein PDIG_90030 [Penicillium digitatum PHI26]
gi|425783551|gb|EKV21396.1| hypothetical protein PDIP_06950 [Penicillium digitatum Pd1]
Length = 439
Score = 221 bits (564), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 116/237 (48%), Positives = 149/237 (62%), Gaps = 29/237 (12%)
Query: 140 KPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSL 199
K DK K ++ V KFVV++ + + D+ RV + Y + LP K+DP V++
Sbjct: 110 KDSDKSKYVINVKQIAKFVVNLGERVSPTDIEEGMRVGVERNKYQIMLPLPPKIDPSVTM 169
Query: 200 MMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKT 259
M VE PD TY VGG QI++++EV+E+P+ PE F LGI PKG LLYGPPGTGKT
Sbjct: 170 MTVEDKPDVTYGDVGGCKEQIEKLREVVEMPLLSPERFVNLGIDPPKGALLYGPPGTGKT 229
Query: 260 LLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLT 319
L ARAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 230 LCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKK--------------- 274
Query: 320 ILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
C IIF DEID++G +R + G+GGD+EVQRTMLEL+ QLDGF++
Sbjct: 275 ------AC--------IIFFDEIDAVGGARFDDGAGGDNEVQRTMLELITQLDGFDS 317
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 226 TGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTK 273
>gi|384496140|gb|EIE86631.1| 26S protease regulatory subunit 7 [Rhizopus delemar RA 99-880]
Length = 435
Score = 221 bits (564), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 116/230 (50%), Positives = 148/230 (64%), Gaps = 29/230 (12%)
Query: 146 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
K ++ V KFVV++ +++ D+ RV + Y + LP K+DP V++M VE+
Sbjct: 112 KYVINVKQIAKFVVELVRHVSPTDIEEGMRVGVDRTKYQIQIPLPPKIDPSVTMMQVEEK 171
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
PD TY VGG QI+ ++EV+ELP+ PE F LGI PKGVLLYGPPGTGKTL ARAV
Sbjct: 172 PDVTYSDVGGCKEQIERLREVVELPLLQPERFVNLGIDPPKGVLLYGPPGTGKTLCARAV 231
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTI 325
A+ T+ TFIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 232 ANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKK--------------------- 270
Query: 326 VCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C IIF DE+D+IG +R + G+GGD+EVQRTMLEL+NQLDGF+
Sbjct: 271 AC--------IIFFDEVDAIGGARFDDGAGGDNEVQRTMLELINQLDGFD 312
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 222 TGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTK 269
>gi|336455143|ref|NP_001229616.1| proteasome 26S subunit subunit 4 ATPase-like [Strongylocentrotus
purpuratus]
Length = 443
Score = 221 bits (564), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 120/288 (41%), Positives = 175/288 (60%), Gaps = 33/288 (11%)
Query: 89 KIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVL 148
+I++ L+ E +N RL+ Q + + R ++ L+ VG + + +D +
Sbjct: 70 RIKDYLLMEEEFIRNQERLKPQEEKDEEE----RSKVDDLRGTPMSVGSLEEIIDDNHAI 125
Query: 149 VKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDS 208
V ++ V I +D + + P C V L ++ + +L + DP+VS+M +EK P
Sbjct: 126 VSASVGSEYYVSILSFVDKDQLEPGCTVLLNHKVLAIVGVLGDDTDPMVSVMKLEKAPQE 185
Query: 209 TYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH 268
+Y +GGLD QI+EIKE +ELP+ HPE ++ +GI PKGV+LYG PGTGKTLLA+AVA+
Sbjct: 186 SYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIRPPKGVILYGAPGTGKTLLAKAVANQ 245
Query: 269 TECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCN 328
T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 246 TSATFLRVVGSELIQKYLGDGPKLVRELFRVAE--------------------------- 278
Query: 329 FREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
EHAPSI+F+DEID+IG+ R ES SGG+ E+QRTMLELLNQLDGF++
Sbjct: 279 --EHAPSIVFIDEIDAIGTKRYESNSGGEREIQRTMLELLNQLDGFDS 324
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 233 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 277
>gi|387915818|gb|AFK11518.1| proteasome (prosome, macropain) 26S subunit, ATPase, 6
[Callorhinchus milii]
Length = 389
Score = 221 bits (564), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 118/278 (42%), Positives = 165/278 (59%), Gaps = 29/278 (10%)
Query: 99 EKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFV 158
E + L+ L+ Q EL + +L+ LQ G VGEV+K + ++K +VK ++V
Sbjct: 21 EIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYV 80
Query: 159 VDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDN 218
V + ++ + + P RVAL + T+ + LP +VDPLV M E + TY +GGL
Sbjct: 81 VGCRRQLEKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVTYSEIGGLAE 140
Query: 219 QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSG 278
QI+E++EVIELP+ +PELF +GI PKG LLYGPPGTGKTLLARAVA +C F++V
Sbjct: 141 QIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVS 200
Query: 279 SELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIF 338
S +V K+IGE +R++RE+F A R+H P IIF
Sbjct: 201 SSIVDKYIGESARLIREMFNYA-----------------------------RDHQPCIIF 231
Query: 339 MDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
MDEID+IG R G+ D E+QRT++ELLNQ+DGF+
Sbjct: 232 MDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDT 269
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 35/46 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA +C F++V S +V K+IGE +R++RE+F AR
Sbjct: 178 TGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYAR 223
>gi|345566815|gb|EGX49757.1| hypothetical protein AOL_s00078g246 [Arthrobotrys oligospora ATCC
24927]
Length = 439
Score = 221 bits (564), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 117/233 (50%), Positives = 148/233 (63%), Gaps = 29/233 (12%)
Query: 143 DKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMV 202
DK K ++ V KFVVD+ + + D+ RV + Y + LP K+DP V++M V
Sbjct: 113 DKAKYVINVKQIAKFVVDLGERVSPTDIEEGMRVGVDRNKYQILLPLPPKIDPSVTMMTV 172
Query: 203 EKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 262
E+ PD TY VGG QI++++EV+E P+ PE F LGI PKGVLLYGPPGTGKTL A
Sbjct: 173 EEKPDVTYGDVGGCKEQIEKLREVVETPLLSPERFVNLGIDPPKGVLLYGPPGTGKTLCA 232
Query: 263 RAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILT 322
RAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 233 RAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKK------------------ 274
Query: 323 NTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C IIF DE+D+IG +R + G+GGD+EVQRTMLEL+ QLDGF+
Sbjct: 275 ---AC--------IIFFDEVDAIGGARFDDGAGGDNEVQRTMLELITQLDGFD 316
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 226 TGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTK 273
>gi|308322419|gb|ADO28347.1| 26S protease regulatory subunit s10b [Ictalurus furcatus]
Length = 389
Score = 221 bits (564), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 119/278 (42%), Positives = 163/278 (58%), Gaps = 29/278 (10%)
Query: 99 EKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFV 158
E + L+ L+ Q EL + +L+ LQ G VGEV+K + ++K +VK ++V
Sbjct: 21 EIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYV 80
Query: 159 VDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDN 218
V + +D + P RVAL + T+ + LP +VDPLV M E +Y +GGL
Sbjct: 81 VGCRRQLDKTKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGIVSYSEIGGLSE 140
Query: 219 QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSG 278
QI+E++EVIELP+ +PELF +GI PKG LLYGPPGTGKTLLARAVA +C F++V
Sbjct: 141 QIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVS 200
Query: 279 SELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIF 338
S +V K+IGE +R++RE+F A R+H P IIF
Sbjct: 201 SSIVDKYIGESARLIREMFNYA-----------------------------RDHQPCIIF 231
Query: 339 MDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
MDEID+IG R G+ D EVQRT++ELLNQ+DGF+
Sbjct: 232 MDEIDAIGGRRFSEGTSADREVQRTLMELLNQMDGFDT 269
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 35/46 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA +C F++V S +V K+IGE +R++RE+F AR
Sbjct: 178 TGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYAR 223
>gi|353243708|emb|CCA75216.1| probable RPT2-26S proteasome regulatory subunit [Piriformospora
indica DSM 11827]
Length = 418
Score = 221 bits (563), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 111/241 (46%), Positives = 159/241 (65%), Gaps = 29/241 (12%)
Query: 135 VGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVD 194
VG + + +D+ +V ++ V + +D + + P C V L ++++ + +L + D
Sbjct: 87 VGTLEELIDEDHAIVSTSSGPEYYVAVMSFVDKDMLEPGCTVLLHHKTHAVVGVLQDDQD 146
Query: 195 PLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPP 254
P+VS+M +EK P +Y +GGLD QI+EIKE +ELP+ HPEL++ +GI PKGV+LYG P
Sbjct: 147 PMVSVMKLEKAPTESYADIGGLDAQIQEIKEAVELPLTHPELYEEMGINPPKGVILYGVP 206
Query: 255 GTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLF 314
GTGKTLLA+AVA+ T TF+RV+GSEL+QK++G+G ++VRELF +A
Sbjct: 207 GTGKTLLAKAVANSTSATFLRVTGSELIQKYLGDGPKLVRELFRVAE------------- 253
Query: 315 WSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGF 374
EHAPSI+F+DEID+IGS R +S SGG+ E+QRTMLELLNQLDGF
Sbjct: 254 ----------------EHAPSIVFIDEIDAIGSKRYDSTSGGEREIQRTMLELLNQLDGF 297
Query: 375 E 375
+
Sbjct: 298 D 298
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 40/45 (88%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV+GSEL+QK++G+G ++VRELF +A
Sbjct: 208 TGKTLLAKAVANSTSATFLRVTGSELIQKYLGDGPKLVRELFRVA 252
>gi|327286230|ref|XP_003227834.1| PREDICTED: 26S protease regulatory subunit 10B-like, partial
[Anolis carolinensis]
Length = 382
Score = 221 bits (563), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 122/290 (42%), Positives = 167/290 (57%), Gaps = 37/290 (12%)
Query: 87 VTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKK 146
V I L +VA +EQ EL + +L+ LQ G VGEV+K + ++K
Sbjct: 10 VHSISPLLFLVAVREQ--------LKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEK 61
Query: 147 VLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVP 206
+VK ++VV + +D + + P RVAL + T+ + LP +VDPLV M E
Sbjct: 62 FIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPG 121
Query: 207 DSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVA 266
D +Y +GGL QI+E++EVIELP+ +PELF +GI PKG LLYGPPGTGKTLLARAVA
Sbjct: 122 DVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVA 181
Query: 267 HHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIV 326
+C F++V S +V K+IGE +R++RE+F A
Sbjct: 182 SQLDCNFLKVVSSSIVDKYIGESARLIREMFNYA-------------------------- 215
Query: 327 CNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
R+H P IIFMDEID+IG R G+ D E+QRT++ELLNQ+DGF+
Sbjct: 216 ---RDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDT 262
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 35/46 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA +C F++V S +V K+IGE +R++RE+F AR
Sbjct: 171 TGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYAR 216
>gi|308500902|ref|XP_003112636.1| CRE-RPT-2 protein [Caenorhabditis remanei]
gi|308267204|gb|EFP11157.1| CRE-RPT-2 protein [Caenorhabditis remanei]
Length = 443
Score = 221 bits (563), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 110/242 (45%), Positives = 158/242 (65%), Gaps = 29/242 (11%)
Query: 135 VGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVD 194
VG + + +D + +V + + V+I +D + P C V L ++++ + +L + D
Sbjct: 112 VGSLEEIIDDQHAIVSTNVGSEHYVNIMSFVDKEQLEPGCSVLLNHKNHAVIGVLSDDTD 171
Query: 195 PLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPP 254
P+VS+M +EK P TY VGGLD QI+EIKE +ELP+ HPE ++ +GI PKGV+LYG P
Sbjct: 172 PMVSVMKLEKAPQETYADVGGLDQQIQEIKEAVELPLTHPEYYEEMGIRPPKGVILYGCP 231
Query: 255 GTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLF 314
GTGKTLLA+AVA+ T TF+R+ GSEL+QK++G+G +MVRELF +A
Sbjct: 232 GTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPKMVRELFRVAE------------- 278
Query: 315 WSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGF 374
E+APSI+F+DEID++G+ R +S SGG+ E+QRTMLELLNQLDGF
Sbjct: 279 ----------------ENAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGF 322
Query: 375 EA 376
++
Sbjct: 323 DS 324
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+R+ GSEL+QK++G+G +MVRELF +A
Sbjct: 233 TGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPKMVRELFRVA 277
>gi|261402636|ref|YP_003246860.1| proteasome-activating nucleotidase [Methanocaldococcus vulcanius
M7]
gi|261369629|gb|ACX72378.1| 26S proteasome subunit P45 family [Methanocaldococcus vulcanius M7]
Length = 432
Score = 221 bits (563), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 115/257 (44%), Positives = 165/257 (64%), Gaps = 29/257 (11%)
Query: 120 MLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALR 179
+LR EL ++ VG VV + ++KV+VK F+V+I ++ D+TP RV L
Sbjct: 81 ILRRELDRMRVPPLIVGTVVDKIGERKVVVKSSTGPSFLVNISHFVNPEDLTPGKRVCLN 140
Query: 180 NESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDA 239
++ T+ +LP D M +++ P YE +GGL+ QI+E++EV+ELP+KHPELF+
Sbjct: 141 QQTLTVVDVLPENKDYRAKAMEIDEKPSVKYEDIGGLEKQIQEVREVVELPLKHPELFEK 200
Query: 240 LGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVM 299
+GI PKG+LLYGPPGTGKTLLA+AVA T TFIRV GSELV+KFIGEG+ +V+++F +
Sbjct: 201 IGIEPPKGILLYGPPGTGKTLLAKAVATETNATFIRVVGSELVKKFIGEGASLVKDIFKL 260
Query: 300 ASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSE 359
A +E APSIIF+DEID+I + R ++ +GGD E
Sbjct: 261 A-----------------------------KEKAPSIIFIDEIDAIAAKRTDALTGGDRE 291
Query: 360 VQRTMLELLNQLDGFEA 376
VQRT+++LL ++DGF+A
Sbjct: 292 VQRTLMQLLAEMDGFDA 308
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 41/51 (80%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
+GKTLLA+AVA T TFIRV GSELV+KFIGEG+ +V+++F +A+ K S
Sbjct: 217 TGKTLLAKAVATETNATFIRVVGSELVKKFIGEGASLVKDIFKLAKEKAPS 267
>gi|441621510|ref|XP_004088749.1| PREDICTED: 26S protease regulatory subunit 4-like [Nomascus
leucogenys]
Length = 336
Score = 221 bits (563), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 107/212 (50%), Positives = 144/212 (67%), Gaps = 29/212 (13%)
Query: 165 IDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIK 224
+D + + P C V L ++ + + +L + DPLV++M VEK P TY +GGLDNQI+EIK
Sbjct: 35 VDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIK 94
Query: 225 EVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQK 284
E +ELP+ HPE ++ +GI PKGV+LYGPPGTGKTLLA+AVA+ T TF+RV GSEL QK
Sbjct: 95 ESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELTQK 154
Query: 285 FIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDS 344
++G+G ++VRELF +A EHAPSI+F DEID+
Sbjct: 155 YLGDGPKLVRELFRVAE-----------------------------EHAPSIVFTDEIDA 185
Query: 345 IGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
IG+ R +S SGG+ E+QRTMLE+LNQLDGF++
Sbjct: 186 IGTKRYDSNSGGEREIQRTMLEMLNQLDGFDS 217
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 38/45 (84%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL QK++G+G ++VRELF +A
Sbjct: 126 TGKTLLAKAVANQTSATFLRVVGSELTQKYLGDGPKLVRELFRVA 170
>gi|17563250|ref|NP_504558.1| Protein RPT-2 [Caenorhabditis elegans]
gi|3122624|sp|O16368.1|PRS4_CAEEL RecName: Full=Probable 26S protease regulatory subunit 4
gi|351050057|emb|CCD64135.1| Protein RPT-2 [Caenorhabditis elegans]
Length = 443
Score = 221 bits (563), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 110/242 (45%), Positives = 158/242 (65%), Gaps = 29/242 (11%)
Query: 135 VGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVD 194
VG + + +D + +V + + V+I +D + P C V L ++++ + +L + D
Sbjct: 112 VGSLEEIIDDQHAIVSTNVGSEHYVNIMSFVDKEQLEPGCSVLLNHKNHAVIGVLSDDTD 171
Query: 195 PLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPP 254
P+VS+M +EK P TY VGGLD QI+EIKE +ELP+ HPE ++ +GI PKGV+LYG P
Sbjct: 172 PMVSVMKLEKAPQETYADVGGLDQQIQEIKEAVELPLTHPEYYEEMGIRPPKGVILYGCP 231
Query: 255 GTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLF 314
GTGKTLLA+AVA+ T TF+R+ GSEL+QK++G+G +MVRELF +A
Sbjct: 232 GTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPKMVRELFRVAE------------- 278
Query: 315 WSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGF 374
E+APSI+F+DEID++G+ R +S SGG+ E+QRTMLELLNQLDGF
Sbjct: 279 ----------------ENAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGF 322
Query: 375 EA 376
++
Sbjct: 323 DS 324
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+R+ GSEL+QK++G+G +MVRELF +A
Sbjct: 233 TGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPKMVRELFRVA 277
>gi|341891111|gb|EGT47046.1| hypothetical protein CAEBREN_12205 [Caenorhabditis brenneri]
Length = 443
Score = 221 bits (563), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 110/242 (45%), Positives = 158/242 (65%), Gaps = 29/242 (11%)
Query: 135 VGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVD 194
VG + + +D + +V + + V+I +D + P C V L ++++ + +L + D
Sbjct: 112 VGSLEEIIDDQHAIVSTNVGSEHYVNIMSFVDKEQLEPGCSVLLNHKNHAVIGVLSDDTD 171
Query: 195 PLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPP 254
P+VS+M +EK P TY VGGLD QI+EIKE +ELP+ HPE ++ +GI PKGV+LYG P
Sbjct: 172 PMVSVMKLEKAPQETYADVGGLDQQIQEIKEAVELPLTHPEYYEEMGIRPPKGVILYGCP 231
Query: 255 GTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLF 314
GTGKTLLA+AVA+ T TF+R+ GSEL+QK++G+G +MVRELF +A
Sbjct: 232 GTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPKMVRELFRVAE------------- 278
Query: 315 WSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGF 374
E+APSI+F+DEID++G+ R +S SGG+ E+QRTMLELLNQLDGF
Sbjct: 279 ----------------ENAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGF 322
Query: 375 EA 376
++
Sbjct: 323 DS 324
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+R+ GSEL+QK++G+G +MVRELF +A
Sbjct: 233 TGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPKMVRELFRVA 277
>gi|268557664|ref|XP_002636822.1| C. briggsae CBR-RPT-2 protein [Caenorhabditis briggsae]
Length = 443
Score = 221 bits (563), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 110/242 (45%), Positives = 158/242 (65%), Gaps = 29/242 (11%)
Query: 135 VGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVD 194
VG + + +D + +V + + V+I +D + P C V L ++++ + +L + D
Sbjct: 112 VGSLEEIIDDQHAIVSTNVGSEHYVNIMSFVDKEQLEPGCSVLLNHKNHAVIGVLSDDTD 171
Query: 195 PLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPP 254
P+VS+M +EK P TY VGGLD QI+EIKE +ELP+ HPE ++ +GI PKGV+LYG P
Sbjct: 172 PMVSVMKLEKAPQETYADVGGLDQQIQEIKEAVELPLTHPEYYEEMGIRPPKGVILYGCP 231
Query: 255 GTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLF 314
GTGKTLLA+AVA+ T TF+R+ GSEL+QK++G+G +MVRELF +A
Sbjct: 232 GTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPKMVRELFRVAE------------- 278
Query: 315 WSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGF 374
E+APSI+F+DEID++G+ R +S SGG+ E+QRTMLELLNQLDGF
Sbjct: 279 ----------------ENAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGF 322
Query: 375 EA 376
++
Sbjct: 323 DS 324
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+R+ GSEL+QK++G+G +MVRELF +A
Sbjct: 233 TGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPKMVRELFRVA 277
>gi|410928215|ref|XP_003977496.1| PREDICTED: 26S protease regulatory subunit 10B-like isoform 1
[Takifugu rubripes]
Length = 389
Score = 221 bits (563), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 117/278 (42%), Positives = 164/278 (58%), Gaps = 29/278 (10%)
Query: 99 EKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFV 158
E + L+ L+ Q E + +L+ LQ G VGEV+K + ++K +VK ++V
Sbjct: 21 EVDGRLKELREQLREQTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYV 80
Query: 159 VDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDN 218
V + +D + + P RVAL + T+ + LP +VDPLV M E + +Y +GGL
Sbjct: 81 VGCRRQLDKSQLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSE 140
Query: 219 QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSG 278
QI+E++EVIELP+ +PELF +GI PKG LLYGPPGTGKTLLARAVA +C F++V
Sbjct: 141 QIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVS 200
Query: 279 SELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIF 338
S +V K+IGE +R++RE+F A R+H P IIF
Sbjct: 201 SSIVDKYIGESARLIREMFNYA-----------------------------RDHQPCIIF 231
Query: 339 MDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
MDEID+IG R G+ D E+QRT++ELLNQ+DGF+
Sbjct: 232 MDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDT 269
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 35/46 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA +C F++V S +V K+IGE +R++RE+F AR
Sbjct: 178 TGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYAR 223
>gi|116788974|gb|ABK25069.1| unknown [Picea sitchensis]
Length = 398
Score = 221 bits (563), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 121/302 (40%), Positives = 173/302 (57%), Gaps = 52/302 (17%)
Query: 97 VAEKEQNLRRLQA---------QRNELNAKVRMLRE--------------ELQLLQEQGS 133
+AE + RL A Q E +A+VR LRE +L+ LQ G
Sbjct: 1 MAEADDAAARLHAVNEYRKKLLQHKEFDARVRTLRENLRTAKKDFDKTEDDLKSLQSVGQ 60
Query: 134 YVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKV 193
+GEV++P+D ++++VK ++VV +D +T RV L + T+ + LP +V
Sbjct: 61 IIGEVLRPLDNERLIVKASSGPRYVVGCRNKVDKEKLTAGTRVVLDMTTLTIMRALPREV 120
Query: 194 DPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGP 253
DP+V M+ E + +Y VGGL +QI+E++E IELP+ +PELF +GI PKGVLLYGP
Sbjct: 121 DPVVYNMLHEDPGNVSYSAVGGLADQIRELRESIELPLMNPELFIRVGIKPPKGVLLYGP 180
Query: 254 PGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLL 313
PGTGKTLLARA+A + + F++V S ++ K+IGE +R++RE+F A
Sbjct: 181 PGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYA------------- 227
Query: 314 FWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDG 373
R+H P IIFMDEID+IG R G+ D E+QRT++ELLNQLDG
Sbjct: 228 ----------------RDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDG 271
Query: 374 FE 375
F+
Sbjct: 272 FD 273
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 35/46 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARA+A + + F++V S ++ K+IGE +R++RE+F AR
Sbjct: 183 TGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYAR 228
>gi|148907029|gb|ABR16658.1| unknown [Picea sitchensis]
Length = 398
Score = 221 bits (563), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 116/280 (41%), Positives = 166/280 (59%), Gaps = 43/280 (15%)
Query: 110 QRNELNAKVRMLRE--------------ELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEG 155
Q E +A+VR LR+ +L+ LQ G +GEV++P+D ++++VK
Sbjct: 23 QHKEFDARVRALRDNLRAAKKEFDKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGP 82
Query: 156 KFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGG 215
++VV +D +T RV L + T+ + LP +VDP+V M+ E + +Y VGG
Sbjct: 83 RYVVGCRNKVDKEKLTAGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGG 142
Query: 216 LDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIR 275
L +QI+E++E IELP+ +PELF +GI PKGVLLYGPPGTGKTLLARA+A + E F++
Sbjct: 143 LADQIRELRESIELPLMNPELFIRVGIKPPKGVLLYGPPGTGKTLLARAIASNIEANFLK 202
Query: 276 VSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPS 335
V S ++ K+IGE +R++RE+F A R+H P
Sbjct: 203 VVSSAIIDKYIGESARLIREMFGYA-----------------------------RDHQPC 233
Query: 336 IIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
IIFMDEID+IG R G+ D E+QRT++ELLNQLDGF+
Sbjct: 234 IIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFD 273
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 35/46 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARA+A + E F++V S ++ K+IGE +R++RE+F AR
Sbjct: 183 TGKTLLARAIASNIEANFLKVVSSAIIDKYIGESARLIREMFGYAR 228
>gi|156551041|ref|XP_001604655.1| PREDICTED: 26S protease regulatory subunit 4-like [Nasonia
vitripennis]
Length = 464
Score = 221 bits (563), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 119/288 (41%), Positives = 176/288 (61%), Gaps = 33/288 (11%)
Query: 89 KIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVL 148
+I++ L+ E +N RL+ Q + + R ++ L+ VG + + +D +
Sbjct: 67 RIKDYLLMEEEFIRNQERLKPQEEKNEEE----RSKVDDLRGTPMSVGTLEEIIDDNHAI 122
Query: 149 VKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDS 208
V + V I +D + + P C V L ++ + + +L + DP+V++M +EK P
Sbjct: 123 VSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLGDDTDPMVTVMKLEKAPQE 182
Query: 209 TYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH 268
TY +GGLD QI+EIKE +ELP+ HPE ++ +GI PKGV+LYGPPGTGKTLLA+AVA+
Sbjct: 183 TYADIGGLDVQIQEIKESVELPMTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQ 242
Query: 269 TECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCN 328
T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 243 TSATFLRVVGSELIQKYLGDGPKLVRELFRVAE--------------------------- 275
Query: 329 FREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
EHAPSI+F+DEID++G+ R +S SGG+ E+QRTMLELLNQLDGF++
Sbjct: 276 --EHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDS 321
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 230 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 274
>gi|47208144|emb|CAF93400.1| unnamed protein product [Tetraodon nigroviridis]
Length = 434
Score = 221 bits (563), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 117/231 (50%), Positives = 147/231 (63%), Gaps = 30/231 (12%)
Query: 146 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
K ++ V KFVVD+ + D+ RV + Y +H LP K+DP V++M VE+
Sbjct: 110 KYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEK 169
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
PD TY VGG QI++++EV+E P+ HPE F LGI PKGVLL+GPPGTGKTL ARAV
Sbjct: 170 PDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 229
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTI 325
A+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 230 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKK--------------------- 268
Query: 326 VCNFREHAPSIIFMDEIDSIGS-SRIESGSGGDSEVQRTMLELLNQLDGFE 375
C +IF DEID+IG SR + G+GGD+EVQRTMLEL+NQLDGF+
Sbjct: 269 AC--------LIFFDEIDAIGGKSRFDDGAGGDNEVQRTMLELINQLDGFD 311
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 220 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTK 267
>gi|168018023|ref|XP_001761546.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687230|gb|EDQ73614.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 425
Score = 221 bits (563), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 115/234 (49%), Positives = 148/234 (63%), Gaps = 29/234 (12%)
Query: 143 DKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMV 202
D K ++ V KFVV + + + D+ RV + Y + LP K+DP V++M V
Sbjct: 99 DDSKYVINVKQIAKFVVGLGEKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTV 158
Query: 203 EKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 262
E+ PD TY +GG QI++++EV+ELP+ HPE F LGI PKGVL YGPPGTGKTLLA
Sbjct: 159 EEKPDVTYNDIGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLA 218
Query: 263 RAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILT 322
RAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 219 RAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKK------------------ 260
Query: 323 NTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
C I+F DE+D+IG +R + G GGD+EVQRTMLE++NQLDGF+A
Sbjct: 261 ---AC--------IVFFDEVDAIGGARFDDGLGGDNEVQRTMLEIVNQLDGFDA 303
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTLLARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 212 TGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSK 259
>gi|47205942|emb|CAF93631.1| unnamed protein product [Tetraodon nigroviridis]
Length = 389
Score = 221 bits (563), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 117/278 (42%), Positives = 164/278 (58%), Gaps = 29/278 (10%)
Query: 99 EKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFV 158
E + L+ L+ Q E + +L+ LQ G VGEV+K + ++K +VK ++V
Sbjct: 21 EVDGRLKELREQLREQTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYV 80
Query: 159 VDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDN 218
V + +D + + P RVAL + T+ + LP +VDPLV M E + +Y +GGL
Sbjct: 81 VGCRRQLDKSQLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSE 140
Query: 219 QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSG 278
QI+E++EVIELP+ +PELF +GI PKG LLYGPPGTGKTLLARAVA +C F++V
Sbjct: 141 QIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVS 200
Query: 279 SELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIF 338
S +V K+IGE +R++RE+F A R+H P IIF
Sbjct: 201 SSIVDKYIGESARLIREMFNYA-----------------------------RDHQPCIIF 231
Query: 339 MDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
MDEID+IG R G+ D E+QRT++ELLNQ+DGF+
Sbjct: 232 MDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDT 269
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 35/46 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA +C F++V S +V K+IGE +R++RE+F AR
Sbjct: 178 TGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYAR 223
>gi|356510074|ref|XP_003523765.1| PREDICTED: 26S protease regulatory subunit S10B homolog B-like
isoform 1 [Glycine max]
gi|356518571|ref|XP_003527952.1| PREDICTED: 26S protease regulatory subunit S10B homolog B-like
isoform 1 [Glycine max]
Length = 398
Score = 221 bits (563), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 121/302 (40%), Positives = 174/302 (57%), Gaps = 52/302 (17%)
Query: 97 VAEKEQNLRRLQA---------QRNELNAKVRMLRE--------------ELQLLQEQGS 133
+AE E +RR A Q EL ++VR +RE +L+ LQ G
Sbjct: 1 MAEAEDAVRRRNAVAEYRKKLLQHKELESRVRSVRENLRASKKEFNKTEDDLKSLQSVGQ 60
Query: 134 YVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKV 193
+GEV++P+D ++++VK ++VV +D +T RV L + T+ + LP +V
Sbjct: 61 IIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREV 120
Query: 194 DPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGP 253
DP+V M+ E + +Y VGGL +QI+E++E IELP+ +PELF +GI PKGVLLYGP
Sbjct: 121 DPVVYNMLHEDPGNISYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGP 180
Query: 254 PGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLL 313
PGTGKTLLARA+A + + F++V S ++ K+IGE +R++RE+F A
Sbjct: 181 PGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYA------------- 227
Query: 314 FWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDG 373
R+H P IIFMDEID+IG R G+ D E+QRT++ELLNQLDG
Sbjct: 228 ----------------RDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDG 271
Query: 374 FE 375
F+
Sbjct: 272 FD 273
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 35/46 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARA+A + + F++V S ++ K+IGE +R++RE+F AR
Sbjct: 183 TGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYAR 228
>gi|330506810|ref|YP_004383238.1| proteasome-activating nucleotidase [Methanosaeta concilii GP6]
gi|328927618|gb|AEB67420.1| Proteasome-activating nucleotidase [Methanosaeta concilii GP6]
Length = 411
Score = 221 bits (563), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 123/317 (38%), Positives = 190/317 (59%), Gaps = 40/317 (12%)
Query: 70 MDVDEAIKSSEG---FKPYYVTK---IEELQLIVAEKEQNL----RRLQAQRNELNAKVR 119
MD E + S F Y + + +EE L + E++ + R ++ Q+ + + R
Sbjct: 1 MDSGEGMNESGAGADFSRYILDRMRQLEERNLALREQKDRVEGEKRLIENQKLKFEREAR 60
Query: 120 MLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALR 179
LR EL+ L+ VG +V +D+ +V+VK +FVV + + I+ ++ +V L
Sbjct: 61 KLRSELERLRVGPMIVGTIVDVLDENRVIVKSSTGPRFVVSLSQFIE-EEIKVGAQVGLN 119
Query: 180 NESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDA 239
+S+ + +LP+ DP V M +E+ PD + +GGLD QI EI+E++ELP+K P+LF +
Sbjct: 120 QQSFAVMCVLPSPRDPAVFGMEIEEAPDVQFSQIGGLDTQISEIREIVELPLKRPDLFTS 179
Query: 240 LGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVM 299
+GI PKGVLL+GPPGTGKT+LA+AVA TE TF+RV GSE VQK+IGEG+R+VRELF +
Sbjct: 180 VGIEPPKGVLLHGPPGTGKTILAKAVAQSTEATFMRVVGSEFVQKYIGEGARLVRELFEL 239
Query: 300 ASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSE 359
A K +P+II +DE+D+IG+ R++ + GD E
Sbjct: 240 AKSK-----------------------------SPAIILIDELDAIGARRMDGATSGDRE 270
Query: 360 VQRTMLELLNQLDGFEA 376
VQRT++++L ++DGF+A
Sbjct: 271 VQRTLMQILAEMDGFDA 287
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKT+LA+AVA TE TF+RV GSE VQK+IGEG+R+VRELF +A+ K
Sbjct: 196 TGKTILAKAVAQSTEATFMRVVGSEFVQKYIGEGARLVRELFELAKSK 243
>gi|307109493|gb|EFN57731.1| hypothetical protein CHLNCDRAFT_56078 [Chlorella variabilis]
Length = 399
Score = 221 bits (563), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 120/288 (41%), Positives = 169/288 (58%), Gaps = 43/288 (14%)
Query: 102 QNLRRLQAQRNELNAKVRMLREE--------------LQLLQEQGSYVGEVVKPMDKKKV 147
++ +R Q E+++KVR LRE+ L+ LQ G +GEV++ +D+++
Sbjct: 13 EDYKRKLLQHKEVDSKVRALREDVKTSKKEYDKTEDDLKALQSVGQIIGEVLRQLDEERF 72
Query: 148 LVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPD 207
+VK ++VV +D +TPN RVAL + T+ +ILP +VDP+V M E
Sbjct: 73 IVKSSSGPRYVVGCRSKVDKEKLTPNTRVALDVTTLTIMRILPREVDPVVFNMTQEDPGK 132
Query: 208 STYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAH 267
Y +GGL QI+E++E +ELP+ +PELF +GI P GVLLYGPPGTGKTLLA+A+A
Sbjct: 133 VDYSSIGGLSEQIRELREAVELPLINPELFARVGIKPPTGVLLYGPPGTGKTLLAKAIAS 192
Query: 268 HTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVC 327
+ E F++V S +V K+IGE +R++RE+F A
Sbjct: 193 NIEANFLKVVASGVVDKYIGESARVIREMFGYA--------------------------- 225
Query: 328 NFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
REH P IIFMDEID+IG R G+ D EVQRT++ELL+QLDGFE
Sbjct: 226 --REHQPCIIFMDEIDAIGGKRFSEGTSADREVQRTLMELLSQLDGFE 271
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 35/46 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLA+A+A + E F++V S +V K+IGE +R++RE+F AR
Sbjct: 181 TGKTLLAKAIASNIEANFLKVVASGVVDKYIGESARVIREMFGYAR 226
>gi|195997743|ref|XP_002108740.1| conserved hypothetical protein [Trichoplax adhaerens]
gi|190589516|gb|EDV29538.1| conserved hypothetical protein [Trichoplax adhaerens]
Length = 387
Score = 221 bits (563), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 121/289 (41%), Positives = 168/289 (58%), Gaps = 43/289 (14%)
Query: 102 QNLRRLQAQRNELNAKVRMLR--------------EELQLLQEQGSYVGEVVKPMDKKKV 147
QN R+ + EL K++ LR + L+ LQ G VGEV++ + ++K
Sbjct: 8 QNYRKKLLRHRELEVKLKDLRMKLKDLSKEYEKSEDNLKALQSVGQIVGEVLRQLAEEKY 67
Query: 148 LVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPD 207
+VK ++VV + + ID N + RVAL + T+ + LP +VDPLV M E D
Sbjct: 68 IVKATNGPRYVVGVRRRIDKNKLKAGTRVALDMTTLTIMRCLPREVDPLVYNMSHEDPGD 127
Query: 208 STYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAH 267
++ +GGL QI+E++EVIELP+ +PELF +GI PKGVLLYGPPGTGKTLLARAVA
Sbjct: 128 VSFSGIGGLSEQIRELREVIELPLLNPELFQRVGINPPKGVLLYGPPGTGKTLLARAVAS 187
Query: 268 HTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVC 327
+ F++V S +V K+IGE +R++RE+F A
Sbjct: 188 QLDANFLKVVSSAIVDKYIGESARLIREMFAYA--------------------------- 220
Query: 328 NFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
R+H P IIFMDEID+IG R G+ D E+QRT++ELLNQ+DGF+A
Sbjct: 221 --RDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDA 267
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 34/46 (73%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA + F++V S +V K+IGE +R++RE+F AR
Sbjct: 176 TGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFAYAR 221
>gi|154151004|ref|YP_001404622.1| proteasome-activating nucleotidase [Methanoregula boonei 6A8]
gi|166199290|sp|A7I8B8.1|PAN_METB6 RecName: Full=Proteasome-activating nucleotidase; Short=PAN;
AltName: Full=Proteasomal ATPase; AltName:
Full=Proteasome regulatory ATPase; AltName:
Full=Proteasome regulatory particle
gi|153999556|gb|ABS55979.1| 26S proteasome subunit P45 family [Methanoregula boonei 6A8]
Length = 436
Score = 221 bits (563), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 118/284 (41%), Positives = 170/284 (59%), Gaps = 29/284 (10%)
Query: 92 ELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKV 151
EL+ + + E + R ++ Q+ +VR L+ E + L+ +G VV +D +V+V+
Sbjct: 59 ELREQIRQAEADKRYIETQKIRYEREVRKLKSESEQLRSPPLIIGTVVDVVDANRVIVRS 118
Query: 152 HPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYE 211
+F+V +++ +D+ P R L +S + ++LP+ D V M + P Y
Sbjct: 119 SAGPRFLVRSSPSVNPDDIKPGARCTLNQQSLAIVELLPSSFDAQVYGMELVDSPQECYT 178
Query: 212 MVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTEC 271
+GGL QI E++E +ELP+K PELF +GI PKGVLLYGPPGTGKTLLA+AVAH T
Sbjct: 179 DIGGLKEQINEVREAVELPLKRPELFTQIGIEPPKGVLLYGPPGTGKTLLAKAVAHETNA 238
Query: 272 TFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFRE 331
F+RV GSELVQK+IGEG+R+VRELF +A K
Sbjct: 239 HFMRVVGSELVQKYIGEGARLVRELFDLAKKK---------------------------- 270
Query: 332 HAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
AP+IIF+DEID++G+SR E+ + GD EVQRT+++LL +DGFE
Sbjct: 271 -APTIIFIDEIDAVGASRTEANTSGDREVQRTLMQLLAGMDGFE 313
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 42/51 (82%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
+GKTLLA+AVAH T F+RV GSELVQK+IGEG+R+VRELF +A+ K +
Sbjct: 223 TGKTLLAKAVAHETNAHFMRVVGSELVQKYIGEGARLVRELFDLAKKKAPT 273
>gi|261203275|ref|XP_002628851.1| 26S protease regulatory subunit [Ajellomyces dermatitidis SLH14081]
gi|239586636|gb|EEQ69279.1| 26S protease regulatory subunit [Ajellomyces dermatitidis SLH14081]
gi|239608325|gb|EEQ85312.1| proteasome regulatory particle subunit Rpt1 [Ajellomyces
dermatitidis ER-3]
gi|327349523|gb|EGE78380.1| hypothetical protein BDDG_01317 [Ajellomyces dermatitidis ATCC
18188]
Length = 439
Score = 221 bits (563), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 133/316 (42%), Positives = 180/316 (56%), Gaps = 39/316 (12%)
Query: 71 DVDEAIKSSEGFKPYYVT------KIEELQLIVAEK----EQNLRRLQAQRNELNAKVRM 120
D D + + G PY +I+E Q V EK E + ++ A +
Sbjct: 31 DEDIQVLKTYGAAPYAAALKKLEKQIKEKQASVNEKIGVKESDTGLAPPHLWDVAADRQR 90
Query: 121 LREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRN 180
++EE L + + + + K +K K ++ V KFVV++ + I D+ RV +
Sbjct: 91 MQEEQPLQVARCTKIIQDEKDPEKSKYVINVKQIAKFVVNLGERISPTDIEEGMRVGVDR 150
Query: 181 ESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDAL 240
Y + LP K+DP V++M VE PD TY VGG QI++++EV+E+P+ PE F +L
Sbjct: 151 NKYQILLPLPPKIDPSVTMMTVEDKPDVTYGDVGGCKEQIEKLREVVEMPLLSPERFVSL 210
Query: 241 GIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
GI PKG LLYGPPGTGKTL ARAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MA
Sbjct: 211 GIDPPKGALLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMA 270
Query: 301 SLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEV 360
KK C IIF DEID+IG +R + G+GGD+EV
Sbjct: 271 RTKK---------------------AC--------IIFFDEIDAIGGARFDDGAGGDNEV 301
Query: 361 QRTMLELLNQLDGFEA 376
QRTMLEL+ QLDGF++
Sbjct: 302 QRTMLELITQLDGFDS 317
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 226 TGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTK 273
>gi|154275720|ref|XP_001538711.1| proteasome-activating nucleotidase [Ajellomyces capsulatus NAm1]
gi|150415151|gb|EDN10513.1| proteasome-activating nucleotidase [Ajellomyces capsulatus NAm1]
gi|225556435|gb|EEH04723.1| 26S protease regulatory subunit [Ajellomyces capsulatus G186AR]
gi|240273543|gb|EER37063.1| 26S protease regulatory subunit 7 [Ajellomyces capsulatus H143]
gi|325087446|gb|EGC40756.1| 26S protease regulatory subunit 7 [Ajellomyces capsulatus H88]
Length = 439
Score = 221 bits (563), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 121/264 (45%), Positives = 163/264 (61%), Gaps = 29/264 (10%)
Query: 113 ELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTP 172
++ A + ++EE L + + + + K +K K ++ V KFVV++ + I D+
Sbjct: 83 DVAADRQRMQEEQPLQVARCTKIIQDEKDPEKSKYVINVKQIAKFVVNLGERISPTDIEE 142
Query: 173 NCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVK 232
RV + Y + LP K+DP V++M VE PD TY VGG QI++++EV+E+P+
Sbjct: 143 GMRVGVDRNKYQILLPLPPKIDPSVTMMTVEDKPDVTYGDVGGCKEQIEKLREVVEMPLL 202
Query: 233 HPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRM 292
PE F +LGI PKG LLYGPPGTGKTL ARAVA+ T+ TFIRV GSELVQK++GEG+RM
Sbjct: 203 SPERFVSLGIDPPKGALLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARM 262
Query: 293 VRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIES 352
VRELF MA KK C IIF DEID+IG +R +
Sbjct: 263 VRELFEMARTKK---------------------AC--------IIFFDEIDAIGGARFDD 293
Query: 353 GSGGDSEVQRTMLELLNQLDGFEA 376
G+GGD+EVQRTMLEL+ QLDGF++
Sbjct: 294 GAGGDNEVQRTMLELITQLDGFDS 317
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 226 TGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTK 273
>gi|428673032|gb|EKX73945.1| 26S proteasome subunit 4, putative [Babesia equi]
Length = 439
Score = 221 bits (563), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 112/242 (46%), Positives = 162/242 (66%), Gaps = 29/242 (11%)
Query: 135 VGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVD 194
VG + + +D+ +V ++ V+I +D + P C V L N++ ++ IL + VD
Sbjct: 108 VGTLEEIIDENHAIVTSSIGPEYYVNILSFVDKELLEPGCSVLLHNKTNSIVGILLDDVD 167
Query: 195 PLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPP 254
PL+++M VEK P +Y+ +GGL++QI+EIKE +ELP+ PEL+D +GI PKGV+LYGPP
Sbjct: 168 PLITVMKVEKAPLESYDDIGGLEDQIQEIKEAVELPLTRPELYDDIGIKPPKGVILYGPP 227
Query: 255 GTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLF 314
GTGKTLLA+AVA+ T TF+RV GSEL+QK++GEG ++VRE+F +A
Sbjct: 228 GTGKTLLAKAVANETSATFLRVVGSELIQKYLGEGPKLVREMFKVAE------------- 274
Query: 315 WSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGF 374
++APSIIF+DEID+IG+ R ++ SGG+ E+QRTMLELLNQLDGF
Sbjct: 275 ----------------DNAPSIIFIDEIDAIGTKRYDATSGGEKEIQRTMLELLNQLDGF 318
Query: 375 EA 376
++
Sbjct: 319 DS 320
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 40/51 (78%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
+GKTLLA+AVA+ T TF+RV GSEL+QK++GEG ++VRE+F +A S
Sbjct: 229 TGKTLLAKAVANETSATFLRVVGSELIQKYLGEGPKLVREMFKVAEDNAPS 279
>gi|340517376|gb|EGR47620.1| predicted protein [Trichoderma reesei QM6a]
Length = 391
Score = 221 bits (563), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 117/277 (42%), Positives = 167/277 (60%), Gaps = 29/277 (10%)
Query: 99 EKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFV 158
E E L+ L+ + +L + E ++ LQ G +GEV+K +D ++ +VK ++V
Sbjct: 23 EWEAKLKNLRLEIKDLQKEYDRTEENIKALQSVGQIIGEVLKQLDDERFIVKASSGPRYV 82
Query: 159 VDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDN 218
V +D + + RVAL + T+ ++LP +VDPLV M +E ++ +GGL++
Sbjct: 83 VGCRSKVDKSKMKQGTRVALDMTTLTIMRMLPREVDPLVYNMSLEDPGQVSFAGIGGLND 142
Query: 219 QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSG 278
QI+E++EVIELP+K+PELF +GI PKGVLLYGPPGTGKTLLARAVA E F++V
Sbjct: 143 QIRELREVIELPLKNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAVASSLETNFLKVVS 202
Query: 279 SELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIF 338
S +V K+IGE +R++RE+F A +EH P IIF
Sbjct: 203 SAIVDKYIGESARLIREMFGYA-----------------------------KEHEPCIIF 233
Query: 339 MDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
MDEID+IG R G+ D E+QRT++ELLNQLDGF+
Sbjct: 234 MDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFD 270
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 34/46 (73%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA E F++V S +V K+IGE +R++RE+F A+
Sbjct: 180 TGKTLLARAVASSLETNFLKVVSSAIVDKYIGESARLIREMFGYAK 225
>gi|313217267|emb|CBY38404.1| unnamed protein product [Oikopleura dioica]
Length = 370
Score = 221 bits (563), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 115/231 (49%), Positives = 150/231 (64%), Gaps = 29/231 (12%)
Query: 146 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
K ++ V KFVVD+ + + D+ RV + Y ++ LP K+DP V++M VE+
Sbjct: 114 KYIINVKQFAKFVVDLGQQVAPTDIEEGMRVGVDRTKYQINIPLPPKIDPSVTMMTVEEK 173
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
PD TY VGG + I++++EV+E+P+ +PE F LGI PKGVL+YGPPGTGKTL ARAV
Sbjct: 174 PDVTYSDVGGCKDAIEKMREVVEIPLLNPEKFVNLGIDPPKGVLMYGPPGTGKTLCARAV 233
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTI 325
A+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 234 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKK--------------------- 272
Query: 326 VCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
C IIF DEID++G +R + GSGGD+EVQRTMLEL+NQLDGF+A
Sbjct: 273 AC--------IIFFDEIDAVGGARFDDGSGGDNEVQRTMLELINQLDGFDA 315
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 224 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTK 271
>gi|145550604|ref|XP_001460980.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124428812|emb|CAK93583.1| unnamed protein product [Paramecium tetraurelia]
Length = 393
Score = 221 bits (563), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 122/296 (41%), Positives = 173/296 (58%), Gaps = 38/296 (12%)
Query: 91 EELQLI--VAEKEQNLRRLQAQRNELNAKVRML-------REELQLLQEQGSYVGEVVKP 141
EEL+L + +EQ L L Q L + L REEL+ +Q VG +
Sbjct: 11 EELELFKQLKLREQELEYLDIQEQYLKDDQKRLKRELVRSREELKRIQAVPLTVGHFNEM 70
Query: 142 MDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMM 201
M++ L+ + V + +D + PN +AL S+++ ILP + D + +M
Sbjct: 71 MNENYALINSNGGATLYVRVLSTLDREKLKPNTSIALHRHSHSVVDILPTETDSSIQMMH 130
Query: 202 VEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLL 261
V + PD +Y+ +GGLD Q +EIKE IELP+ PEL+ +GI P+GVLLYGPPGTGKT++
Sbjct: 131 VTEKPDVSYQDIGGLDQQKQEIKEAIELPLSCPELYKQIGIDPPRGVLLYGPPGTGKTMI 190
Query: 262 ARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTIL 321
A+AVAHHT +FIRV GSE VQK++GEG RMVR++F +A
Sbjct: 191 AKAVAHHTTASFIRVVGSEFVQKYLGEGPRMVRDVFRLA--------------------- 229
Query: 322 TNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEAT 377
RE+APSIIF+DE+DSI + R ++ +G D EVQR ++ELLNQ+DGF+ +
Sbjct: 230 --------RENAPSIIFIDEVDSIATKRFDAQTGADREVQRILIELLNQMDGFDQS 277
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 41/51 (80%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
+GKT++A+AVAHHT +FIRV GSE VQK++GEG RMVR++F +AR S
Sbjct: 185 TGKTMIAKAVAHHTTASFIRVVGSEFVQKYLGEGPRMVRDVFRLARENAPS 235
>gi|451849896|gb|EMD63199.1| hypothetical protein COCSADRAFT_172590 [Cochliobolus sativus
ND90Pr]
Length = 439
Score = 221 bits (563), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 120/264 (45%), Positives = 162/264 (61%), Gaps = 29/264 (10%)
Query: 113 ELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTP 172
++ A + ++EE L + + + + K +K K ++ V KFVV++ + + D+
Sbjct: 83 DIAADRQRMQEEQPLQVARCTKIIQDEKDSEKSKYVINVKQIAKFVVNLGERVSPTDIEE 142
Query: 173 NCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVK 232
RV + Y + LP K+DP V++M VE PD TY VGG QI++++EV+E+P+
Sbjct: 143 GMRVGVDRNKYQILLPLPPKIDPSVTMMTVEDKPDVTYGDVGGCKEQIEKLREVVEMPLL 202
Query: 233 HPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRM 292
PE F LGI PKG LLYGPPGTGKTL ARAVA+ T+ TFIRV GSELVQK++GEG+RM
Sbjct: 203 SPERFVNLGIDPPKGALLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARM 262
Query: 293 VRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIES 352
VRELF MA KK C IIF DEID++G +R +
Sbjct: 263 VRELFEMARTKK---------------------AC--------IIFFDEIDAVGGARFDD 293
Query: 353 GSGGDSEVQRTMLELLNQLDGFEA 376
G+GGD+EVQRTMLEL+ QLDGF+A
Sbjct: 294 GAGGDNEVQRTMLELITQLDGFDA 317
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 226 TGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTK 273
>gi|186489067|ref|NP_001117440.1| AAA-type ATPase family protein [Arabidopsis thaliana]
gi|332193952|gb|AEE32073.1| AAA-type ATPase family protein [Arabidopsis thaliana]
Length = 335
Score = 221 bits (563), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 123/308 (39%), Positives = 178/308 (57%), Gaps = 39/308 (12%)
Query: 71 DVDEAIKSSEGFKPYYVTKI---EELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQL 127
D D+A + Y K+ +EL+ V +NLR A + E N ++L+
Sbjct: 3 DGDDAARRRTAAVTDYRKKLLHHKELESRVRTARENLR---AAKKEFNKT----EDDLKS 55
Query: 128 LQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHK 187
LQ G +GEV++P+D ++++VK ++VV +D +T RV L + T+ +
Sbjct: 56 LQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMR 115
Query: 188 ILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKG 247
LP +VDP+V M+ E + +Y VGGL +QI+E++E IELP+ +PELF +GI PKG
Sbjct: 116 ALPREVDPVVYNMLHEDPGNISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKG 175
Query: 248 VLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAF 307
VLLYGPPGTGKTLLARA+A + + F++V S ++ K+IGE +R++RE+F A
Sbjct: 176 VLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYA------- 228
Query: 308 AHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLEL 367
REH P IIFMDEID+IG R G+ D E+QRT++EL
Sbjct: 229 ----------------------REHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMEL 266
Query: 368 LNQLDGFE 375
LNQLDGF+
Sbjct: 267 LNQLDGFD 274
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 35/46 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARA+A + + F++V S ++ K+IGE +R++RE+F AR
Sbjct: 184 TGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAR 229
>gi|346472533|gb|AEO36111.1| hypothetical protein [Amblyomma maculatum]
Length = 361
Score = 221 bits (562), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 116/270 (42%), Positives = 162/270 (60%), Gaps = 29/270 (10%)
Query: 107 LQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNID 166
++ Q ELN + +L+ LQ G VGEV+K + ++K +VK ++VV + +D
Sbjct: 1 MREQLKELNKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLD 60
Query: 167 INDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEV 226
+ P RVAL + T+ + LP +VDPLV M E + +Y M+GGL QI+E++EV
Sbjct: 61 KAKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNISYAMIGGLAEQIRELREV 120
Query: 227 IELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFI 286
IELP+ +PELF +GI PKG LLYGPPGTGKTLLARAVA E F++V S +V K+I
Sbjct: 121 IELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQIEANFLKVVSSAIVDKYI 180
Query: 287 GEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIG 346
GE +R++RE+F A R+H P +IFMDEID+IG
Sbjct: 181 GESARLIREMFNYA-----------------------------RDHQPCVIFMDEIDAIG 211
Query: 347 SSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
R G+ D E+QRT++ELLNQ+DGF++
Sbjct: 212 GRRFSEGTSADREIQRTLMELLNQMDGFDS 241
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 34/46 (73%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA E F++V S +V K+IGE +R++RE+F AR
Sbjct: 150 TGKTLLARAVASQIEANFLKVVSSAIVDKYIGESARLIREMFNYAR 195
>gi|358335598|dbj|GAA29830.2| 26S proteasome regulatory subunit T1 [Clonorchis sinensis]
Length = 433
Score = 221 bits (562), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 115/230 (50%), Positives = 145/230 (63%), Gaps = 29/230 (12%)
Query: 146 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
K ++ V KFVVD+ + D+ RV + Y +H LP K+DP V++M VE
Sbjct: 110 KYIINVKQFAKFVVDLADTVAPTDIEEGMRVGVDRTKYQIHIPLPPKIDPSVTMMQVEDK 169
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
PD TY VGG QI+ ++EV+ELP+ HPE F LGI PKGVLL+GPPGTGKTL ARAV
Sbjct: 170 PDVTYSDVGGCKEQIERLREVVELPLLHPEQFVNLGIEPPKGVLLFGPPGTGKTLCARAV 229
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTI 325
A+ T+ FIRV GSELVQK++GEG+RMVRELF +A KK
Sbjct: 230 ANRTDACFIRVIGSELVQKYVGEGARMVRELFELARSKK--------------------- 268
Query: 326 VCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C IIF DEID++G +R + G+G D+EVQRTMLEL+NQLDGF+
Sbjct: 269 AC--------IIFFDEIDAVGGARFDDGAGSDNEVQRTMLELINQLDGFD 310
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF +AR K
Sbjct: 220 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFELARSK 267
>gi|330915288|ref|XP_003296969.1| hypothetical protein PTT_07229 [Pyrenophora teres f. teres 0-1]
gi|311330604|gb|EFQ94933.1| hypothetical protein PTT_07229 [Pyrenophora teres f. teres 0-1]
Length = 439
Score = 221 bits (562), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 120/264 (45%), Positives = 162/264 (61%), Gaps = 29/264 (10%)
Query: 113 ELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTP 172
++ A + ++EE L + + + + K +K K ++ V KFVV++ + + D+
Sbjct: 83 DIAADRQRMQEEQPLQVARCTKIIQDEKDSEKSKYVINVKQIAKFVVNLGERVSPTDIEE 142
Query: 173 NCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVK 232
RV + Y + LP K+DP V++M VE PD TY VGG QI++++EV+E+P+
Sbjct: 143 GMRVGVDRNKYQILLPLPPKIDPSVTMMTVEDKPDVTYGDVGGCKEQIEKLREVVEMPLL 202
Query: 233 HPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRM 292
PE F LGI PKG LLYGPPGTGKTL ARAVA+ T+ TFIRV GSELVQK++GEG+RM
Sbjct: 203 SPERFVNLGIDPPKGALLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARM 262
Query: 293 VRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIES 352
VRELF MA KK C IIF DEID++G +R +
Sbjct: 263 VRELFEMARTKK---------------------AC--------IIFFDEIDAVGGARFDD 293
Query: 353 GSGGDSEVQRTMLELLNQLDGFEA 376
G+GGD+EVQRTMLEL+ QLDGF+A
Sbjct: 294 GAGGDNEVQRTMLELITQLDGFDA 317
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 226 TGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTK 273
>gi|255944731|ref|XP_002563133.1| Pc20g06040 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211587868|emb|CAP85933.1| Pc20g06040 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 439
Score = 221 bits (562), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 116/237 (48%), Positives = 149/237 (62%), Gaps = 29/237 (12%)
Query: 140 KPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSL 199
K DK K ++ V KFVV++ + + D+ RV + Y + LP K+DP V++
Sbjct: 110 KDSDKSKYVINVKQIAKFVVNLGERVSPTDIEEGMRVGVDRNKYQIMLPLPPKIDPSVTM 169
Query: 200 MMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKT 259
M VE PD TY VGG QI++++EV+E+P+ PE F LGI PKG LLYGPPGTGKT
Sbjct: 170 MTVEDKPDVTYGDVGGSKEQIEKLREVVEMPLLSPERFVNLGIDPPKGALLYGPPGTGKT 229
Query: 260 LLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLT 319
L ARAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 230 LCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKK--------------- 274
Query: 320 ILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
C IIF DEID++G +R + G+GGD+EVQRTMLEL+ QLDGF++
Sbjct: 275 ------AC--------IIFFDEIDAVGGARFDDGAGGDNEVQRTMLELITQLDGFDS 317
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 226 TGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTK 273
>gi|452001718|gb|EMD94177.1| hypothetical protein COCHEDRAFT_1222749 [Cochliobolus
heterostrophus C5]
Length = 439
Score = 221 bits (562), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 120/264 (45%), Positives = 162/264 (61%), Gaps = 29/264 (10%)
Query: 113 ELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTP 172
++ A + ++EE L + + + + K +K K ++ V KFVV++ + + D+
Sbjct: 83 DIAADRQRMQEEQPLQVARCTKIIQDEKDSEKSKYVINVKQIAKFVVNLGERVSPTDIEE 142
Query: 173 NCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVK 232
RV + Y + LP K+DP V++M VE PD TY VGG QI++++EV+E+P+
Sbjct: 143 GMRVGVDRNKYQILLPLPPKIDPSVTMMTVEDKPDVTYGDVGGCKEQIEKLREVVEMPLL 202
Query: 233 HPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRM 292
PE F LGI PKG LLYGPPGTGKTL ARAVA+ T+ TFIRV GSELVQK++GEG+RM
Sbjct: 203 SPERFVNLGIDPPKGALLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARM 262
Query: 293 VRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIES 352
VRELF MA KK C IIF DEID++G +R +
Sbjct: 263 VRELFEMARTKK---------------------AC--------IIFFDEIDAVGGARFDD 293
Query: 353 GSGGDSEVQRTMLELLNQLDGFEA 376
G+GGD+EVQRTMLEL+ QLDGF+A
Sbjct: 294 GAGGDNEVQRTMLELITQLDGFDA 317
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 226 TGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTK 273
>gi|440797367|gb|ELR18455.1| 26S proteasome AAAATPase subunit RPT4a, putative [Acanthamoeba
castellanii str. Neff]
Length = 391
Score = 221 bits (562), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 116/280 (41%), Positives = 166/280 (59%), Gaps = 43/280 (15%)
Query: 110 QRNELNAKVRMLREE--------------LQLLQEQGSYVGEVVKPMDKKKVLVKVHPEG 155
Q E+N +VR +RE+ L+ LQ G +GEV++ +D +K +VK
Sbjct: 20 QHKEVNDRVRSMREDFKTQKRAYDKSEDDLKALQSVGQIIGEVLRQLDDEKFIVKASSGP 79
Query: 156 KFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGG 215
++VV K ++ + RVAL + T+ + LP +VDP+V M+ E + +Y +GG
Sbjct: 80 RYVVGCRKRVEKKKLIAGTRVALDMTTLTIMRALPREVDPVVFKMLSEDPGEVSYSSIGG 139
Query: 216 LDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIR 275
L+ QI++++E IELP+ +PELF +GI PKGVLLYGPPGTGKTLLARA+AH+ E F++
Sbjct: 140 LNEQIRDLRETIELPLTNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAMAHNVEAKFMK 199
Query: 276 VSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPS 335
V S +V K+IGE +R++RE+F A REH P
Sbjct: 200 VVSSAIVDKYIGESARLIREMFGYA-----------------------------REHQPC 230
Query: 336 IIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
IIFMDEID+IG R G+ D E+QRT++ELLNQ+DGF+
Sbjct: 231 IIFMDEIDAIGGRRFSQGTSADREIQRTLMELLNQMDGFD 270
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 36/46 (78%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARA+AH+ E F++V S +V K+IGE +R++RE+F AR
Sbjct: 180 TGKTLLARAMAHNVEAKFMKVVSSAIVDKYIGESARLIREMFGYAR 225
>gi|167520500|ref|XP_001744589.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776920|gb|EDQ90538.1| predicted protein [Monosiga brevicollis MX1]
Length = 388
Score = 221 bits (562), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 119/282 (42%), Positives = 167/282 (59%), Gaps = 32/282 (11%)
Query: 97 VAEKEQNLRRLQAQR---NELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHP 153
+ E +Q RL+ +R +L AK ++LQ LQ G +GEV+K + ++K +VK
Sbjct: 15 LVEHKQLSARLKQKRESAKDLRAKYEKSEDDLQALQSVGQIIGEVLKQLTEEKFIVKASS 74
Query: 154 EGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMV 213
++VV + +D + P RV L + T+ +ILP +VDP+V M E Y V
Sbjct: 75 GPRYVVACRRGLDRAKLKPTTRVTLDMTTLTIMRILPREVDPMVYNMSHEDPGAVAYSSV 134
Query: 214 GGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTF 273
GGL Q++E++EVIELP+K+PELF +GI PKG LLYGPPGTGKTLLARAVA + + F
Sbjct: 135 GGLSQQLRELREVIELPLKNPELFIRIGIKPPKGCLLYGPPGTGKTLLARAVASNVDANF 194
Query: 274 IRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHA 333
++V S +V K+IGE +R++RE+F A R+H
Sbjct: 195 LKVVSSAIVDKYIGESARLIREMFGYA-----------------------------RDHE 225
Query: 334 PSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
P IIFMDEID+IG R G+ D E+QRT++ELLNQ+DGF+
Sbjct: 226 PCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFD 267
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 35/46 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA + + F++V S +V K+IGE +R++RE+F AR
Sbjct: 177 TGKTLLARAVASNVDANFLKVVSSAIVDKYIGESARLIREMFGYAR 222
>gi|358388832|gb|EHK26425.1| hypothetical protein TRIVIDRAFT_111074 [Trichoderma virens Gv29-8]
Length = 391
Score = 221 bits (562), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 117/277 (42%), Positives = 166/277 (59%), Gaps = 29/277 (10%)
Query: 99 EKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFV 158
E E L+ L+ + +L + E ++ LQ G +GEV+K +D ++ +VK ++V
Sbjct: 23 EWEAKLKNLRLEIKDLQKEYDRTEENIKALQSVGQIIGEVLKQLDDERFIVKASSGPRYV 82
Query: 159 VDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDN 218
V +D + RVAL + T+ ++LP +VDPLV M +E ++ +GGL++
Sbjct: 83 VGCRSKVDKTKMKQGTRVALDMTTLTIMRMLPREVDPLVYNMSLEDPGQVSFAGIGGLND 142
Query: 219 QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSG 278
QI+E++EVIELP+K+PELF +GI PKGVLLYGPPGTGKTLLARAVA E F++V
Sbjct: 143 QIRELREVIELPLKNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAVASSLETNFLKVVS 202
Query: 279 SELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIF 338
S +V K+IGE +R++RE+F A +EH P IIF
Sbjct: 203 SAIVDKYIGESARLIREMFGYA-----------------------------KEHEPCIIF 233
Query: 339 MDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
MDEID+IG R G+ D E+QRT++ELLNQLDGF+
Sbjct: 234 MDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFD 270
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 34/46 (73%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA E F++V S +V K+IGE +R++RE+F A+
Sbjct: 180 TGKTLLARAVASSLETNFLKVVSSAIVDKYIGESARLIREMFGYAK 225
>gi|412993952|emb|CCO14463.1| 26S protease regulatory subunit 7 [Bathycoccus prasinos]
Length = 433
Score = 221 bits (562), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 128/319 (40%), Positives = 183/319 (57%), Gaps = 44/319 (13%)
Query: 70 MDVDE-AIKSSEGFKPY----------YVTKIEELQLIVAEKEQNLRRLQAQRNELNAKV 118
+D D+ A+ + G PY V+ + ++ + KE + R +L A
Sbjct: 25 LDADDIALLKTYGVGPYGTLIKNLETDLVSCVSRVEKLCGIKESDTGLAPPSRWDLTADK 84
Query: 119 RMLREELQLLQEQGSYVGEVVKP-MDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVA 177
+ +EE L Q + +++ P + ++ V KFVV + +++ D+ RV
Sbjct: 85 QATQEEHPL---QVARCTKIINPGTTDAQYVINVKQIAKFVVGLGQHVAPTDIEEGMRVG 141
Query: 178 LRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELF 237
+ Y++ LP K+DP V++M VE+ PD TY VGG +QI++++EV+ELP+ HPE F
Sbjct: 142 VDRTKYSIQIPLPPKIDPSVTMMTVEEKPDVTYADVGGNKDQIEKLREVVELPLLHPEKF 201
Query: 238 DALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 297
LGI PKG+L YGPPGTGKTLLARAVA+ T+ FIRV GSELVQK++GEG+R+VRELF
Sbjct: 202 VTLGIDPPKGILCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARLVRELF 261
Query: 298 VMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGD 357
MA KK +IF DE+D+IG +R + G GGD
Sbjct: 262 QMARSKKAC-----------------------------LIFFDEVDAIGGARFDDGQGGD 292
Query: 358 SEVQRTMLELLNQLDGFEA 376
+EVQRTMLE++NQLDGF+A
Sbjct: 293 NEVQRTMLEIVNQLDGFDA 311
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTLLARAVA+ T+ FIRV GSELVQK++GEG+R+VRELF MAR K
Sbjct: 220 TGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARLVRELFQMARSK 267
>gi|413954589|gb|AFW87238.1| hypothetical protein ZEAMMB73_492879 [Zea mays]
Length = 447
Score = 221 bits (562), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 117/273 (42%), Positives = 167/273 (61%), Gaps = 32/273 (11%)
Query: 106 RLQAQRNEL-NAKVRMLR--EELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDID 162
R++ R L NAK + + E+L+ LQ G +GEV++P+DK++ +VK ++VV
Sbjct: 79 RVKTGRENLKNAKKNLEKTEEDLKSLQSVGQIIGEVLRPLDKERFIVKASSGPRYVVACR 138
Query: 163 KNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKE 222
+D + RV L + T+ +ILP +VDP+V M+ E + +Y VGGL +QI+E
Sbjct: 139 SKVDKEKLIAGTRVVLDMTTLTIMRILPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRE 198
Query: 223 IKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELV 282
++E IELP+ +PELF +GI PKGVLLYGPPGTGKTLLARA+A + + F++V S ++
Sbjct: 199 LRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAII 258
Query: 283 QKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEI 342
K+IGE +R++RE+F A REH P IIFMDEI
Sbjct: 259 DKYIGESARLIREMFNYA-----------------------------REHQPCIIFMDEI 289
Query: 343 DSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
D+IG R G+ D E+QRT++ELLNQLDGF+
Sbjct: 290 DAIGGRRFSEGTSADREIQRTLMELLNQLDGFD 322
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 35/46 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARA+A + + F++V S ++ K+IGE +R++RE+F AR
Sbjct: 232 TGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAR 277
>gi|356551904|ref|XP_003544312.1| PREDICTED: 26S protease regulatory subunit 10B homolog A-like
isoform 1 [Glycine max]
Length = 399
Score = 221 bits (562), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 116/280 (41%), Positives = 166/280 (59%), Gaps = 43/280 (15%)
Query: 110 QRNELNAKVRMLRE--------------ELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEG 155
Q EL ++VR +RE +L+ LQ G +GEV++P+D ++++VK
Sbjct: 24 QHKELESRVRSVRENLRASKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGP 83
Query: 156 KFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGG 215
++VV +D +T RV L + T+ + LP +VDP+V M+ E + +Y VGG
Sbjct: 84 RYVVGCRSKVDKEKLTAGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNISYSAVGG 143
Query: 216 LDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIR 275
L +QI+E++E IELP+ +PELF +GI PKGVLLYGPPGTGKTLLARA+A + E F++
Sbjct: 144 LSDQIRELRESIELPLMNPELFIRVGIKPPKGVLLYGPPGTGKTLLARAIASNIEANFLK 203
Query: 276 VSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPS 335
V S ++ K+IGE +R++RE+F A R+H P
Sbjct: 204 VVSSAIIDKYIGESARLIREMFGYA-----------------------------RDHQPC 234
Query: 336 IIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
IIFMDEID+IG R G+ D E+QRT++ELLNQLDGF+
Sbjct: 235 IIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFD 274
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 35/46 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARA+A + E F++V S ++ K+IGE +R++RE+F AR
Sbjct: 184 TGKTLLARAIASNIEANFLKVVSSAIIDKYIGESARLIREMFGYAR 229
>gi|449297493|gb|EMC93511.1| hypothetical protein BAUCODRAFT_141988 [Baudoinia compniacensis
UAMH 10762]
Length = 439
Score = 221 bits (562), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 115/237 (48%), Positives = 150/237 (63%), Gaps = 29/237 (12%)
Query: 140 KPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSL 199
K +K K ++ V KFVV++ + + D+ RV + Y + LP K+DP V++
Sbjct: 110 KDTEKSKYVINVKQIAKFVVNLGERVSPTDIEEGMRVGVDRNKYQIMLPLPPKIDPSVTM 169
Query: 200 MMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKT 259
M VE PD TY VGG QI++++EV+E+P+ PE F +LGI PKG LLYGPPGTGKT
Sbjct: 170 MTVEDKPDVTYGDVGGCKEQIEKLREVVEMPLLSPERFVSLGIDPPKGALLYGPPGTGKT 229
Query: 260 LLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLT 319
L ARAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 230 LCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKK--------------- 274
Query: 320 ILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
C IIF DEID++G +R + G+GGD+EVQRTMLEL+ QLDGF++
Sbjct: 275 ------AC--------IIFFDEIDAVGGARFDDGAGGDNEVQRTMLELITQLDGFDS 317
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 226 TGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTK 273
>gi|295672343|ref|XP_002796718.1| 26S protease regulatory subunit 8 [Paracoccidioides sp. 'lutzii'
Pb01]
gi|225683273|gb|EEH21557.1| 26S protease regulatory subunit 7 [Paracoccidioides brasiliensis
Pb03]
gi|226283698|gb|EEH39264.1| 26S protease regulatory subunit 8 [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226288250|gb|EEH43762.1| 26S protease regulatory subunit 8 [Paracoccidioides brasiliensis
Pb18]
Length = 439
Score = 221 bits (562), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 120/264 (45%), Positives = 163/264 (61%), Gaps = 29/264 (10%)
Query: 113 ELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTP 172
++ A + ++EE L + + + + K +K K ++ V KFVV++ + + D+
Sbjct: 83 DVAADRQRMQEEQPLQVARCTKIIQDEKDPEKSKYVINVKQIAKFVVNLGERVSPTDIEE 142
Query: 173 NCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVK 232
RV + Y + LP K+DP V++M VE PD TY VGG QI++++EV+E+P+
Sbjct: 143 GMRVGVDRNKYQILLPLPPKIDPSVTMMTVEDKPDVTYGDVGGCKEQIEKLREVVEMPLL 202
Query: 233 HPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRM 292
PE F +LGI PKG LLYGPPGTGKTL ARAVA+ T+ TFIRV GSELVQK++GEG+RM
Sbjct: 203 SPERFVSLGIDPPKGALLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARM 262
Query: 293 VRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIES 352
VRELF MA KK C IIF DEID+IG +R +
Sbjct: 263 VRELFEMARTKK---------------------AC--------IIFFDEIDAIGGARFDD 293
Query: 353 GSGGDSEVQRTMLELLNQLDGFEA 376
G+GGD+EVQRTMLEL+ QLDGF++
Sbjct: 294 GAGGDNEVQRTMLELITQLDGFDS 317
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 226 TGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTK 273
>gi|123478150|ref|XP_001322239.1| proteasome endopeptidase complex [Trichomonas vaginalis G3]
gi|121905081|gb|EAY10016.1| proteasome endopeptidase complex, putative [Trichomonas vaginalis
G3]
Length = 423
Score = 221 bits (562), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 114/234 (48%), Positives = 148/234 (63%), Gaps = 29/234 (12%)
Query: 143 DKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMV 202
+K + ++ + KFVV I KNI +D+T RV + Y + LP ++DP+V+ M V
Sbjct: 97 EKARYIISISHVAKFVVGIGKNIAPSDITEGMRVGVDRRRYAIQLPLPPRIDPIVTTMQV 156
Query: 203 EKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 262
E+ PD TY +GG QI++++E+IE+P+ HPE F+ LGI PKGVLLYGPPGTGKTLLA
Sbjct: 157 EEKPDITYADIGGCHEQIEKLREIIEMPLLHPERFETLGIDPPKGVLLYGPPGTGKTLLA 216
Query: 263 RAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILT 322
RAVA+ TE FIRV GSELVQK+IGEG+RMVRE+F MA KK
Sbjct: 217 RAVANRTESVFIRVIGSELVQKYIGEGARMVREIFQMARSKK------------------ 258
Query: 323 NTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
IIF DE+D+ G +R G ++EVQRTMLEL+ QLDGF+A
Sbjct: 259 -----------SCIIFFDEVDAFGGARNSDSDGAENEVQRTMLELITQLDGFDA 301
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/50 (76%), Positives = 43/50 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGS 61
+GKTLLARAVA+ TE FIRV GSELVQK+IGEG+RMVRE+F MAR K S
Sbjct: 210 TGKTLLARAVANRTESVFIRVIGSELVQKYIGEGARMVREIFQMARSKKS 259
>gi|428169110|gb|EKX38047.1| 26S proteasome regulatory complex, subunit RPT1 [Guillardia theta
CCMP2712]
Length = 435
Score = 221 bits (562), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 131/346 (37%), Positives = 190/346 (54%), Gaps = 65/346 (18%)
Query: 58 CKGSSRGTEFFTMDVDEAIKSSEGFKPYYVTKIEELQLI----VAEKEQNLRRLQAQRNE 113
C+ ++RG ++ + D DE KP E+++L+ + ++++ L+ ++
Sbjct: 6 CQTTNRG-DYASDDEDE--------KPVQALDEEDIELLKTYGLGPYTKSIKELEEDISK 56
Query: 114 LNAKVRMLR-------------------EELQLLQEQGSYVGEVVKPM----DKKKVLVK 150
+N +V +R ++ + QEQ V K + D K ++
Sbjct: 57 MNKRVNDIRGVKESDTGLAPPSMWDVVADKEMMQQEQPLQVARCTKILNAGQDDAKYMIN 116
Query: 151 VHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTY 210
V KFVV + + D+ RV + Y + LP K+DP V++M VE PD TY
Sbjct: 117 VKQIAKFVVGLGDRVAATDIEEGMRVGVDRTKYQIQIPLPPKIDPTVTMMQVEDKPDVTY 176
Query: 211 EMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTE 270
VGG +++++EV+ELP+ HPE F ALGI PKG+LLYGPPGTGKTL ARAVA+ T+
Sbjct: 177 NDVGGCKESLEKLREVVELPLLHPEKFVALGIDPPKGILLYGPPGTGKTLSARAVANRTD 236
Query: 271 CTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFR 330
FIRV GSELVQK++GEG+RMVRELF +A KK
Sbjct: 237 ACFIRVIGSELVQKYVGEGARMVRELFQLARSKKAC------------------------ 272
Query: 331 EHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
I+F DE+D+IG +R + G+GGD+EVQRTMLE++NQLDGF+A
Sbjct: 273 -----IVFFDEVDAIGGARFDDGAGGDNEVQRTMLEIVNQLDGFDA 313
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF +AR K
Sbjct: 222 TGKTLSARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQLARSK 269
>gi|119467978|ref|XP_001257795.1| proteasome regulatory particle subunit Rpt4, putative [Neosartorya
fischeri NRRL 181]
gi|119405947|gb|EAW15898.1| proteasome regulatory particle subunit Rpt4, putative [Neosartorya
fischeri NRRL 181]
Length = 393
Score = 221 bits (562), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 117/277 (42%), Positives = 167/277 (60%), Gaps = 29/277 (10%)
Query: 99 EKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFV 158
E E L+ L+ +L + + E ++ LQ G +GEV+K +D+++ +VK ++V
Sbjct: 25 EWEAKLKNLRMGIKDLQREFDISEENIKALQSVGQIIGEVLKQLDEERFIVKASSGPRYV 84
Query: 159 VDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDN 218
V +D + + RVAL + T+ ++LP +VDPLV M +E + +GGL++
Sbjct: 85 VGCRSKVDKSKLKQGTRVALDMTTLTIMRMLPREVDPLVYNMSLEDPGQINFAGIGGLND 144
Query: 219 QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSG 278
QI+E++EVIELP+K+PELF +GI PKGVLLYGPPGTGKTLLARAVA E F++V
Sbjct: 145 QIRELREVIELPLKNPELFQRVGIKPPKGVLLYGPPGTGKTLLARAVASSMETNFLKVVS 204
Query: 279 SELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIF 338
S +V K+IGE +R++RE+F A +EH P IIF
Sbjct: 205 SAIVDKYIGESARLIREMFGYA-----------------------------KEHEPCIIF 235
Query: 339 MDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
MDEID+IG R G+ D E+QRT++ELLNQLDGF+
Sbjct: 236 MDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFD 272
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 34/46 (73%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA E F++V S +V K+IGE +R++RE+F A+
Sbjct: 182 TGKTLLARAVASSMETNFLKVVSSAIVDKYIGESARLIREMFGYAK 227
>gi|358395878|gb|EHK45265.1| ATPase Rpt4 of the 19S regulatory particle of the 26S proteasome
[Trichoderma atroviride IMI 206040]
Length = 391
Score = 220 bits (561), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 117/277 (42%), Positives = 166/277 (59%), Gaps = 29/277 (10%)
Query: 99 EKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFV 158
E E L+ L+ + +L + E ++ LQ G +GEV+K +D ++ +VK ++V
Sbjct: 23 EWEAKLKNLRLEIKDLQKEYDRTEENIKALQSVGQIIGEVLKQLDDERFIVKASSGPRYV 82
Query: 159 VDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDN 218
V +D + RVAL + T+ ++LP +VDPLV M +E ++ +GGL++
Sbjct: 83 VGCRSKVDKTKLKQGTRVALDMTTLTIMRMLPREVDPLVYNMSLEDPGQVSFAGIGGLND 142
Query: 219 QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSG 278
QI+E++EVIELP+K+PELF +GI PKGVLLYGPPGTGKTLLARAVA E F++V
Sbjct: 143 QIRELREVIELPLKNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAVASSLETNFLKVVS 202
Query: 279 SELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIF 338
S +V K+IGE +R++RE+F A +EH P IIF
Sbjct: 203 SAIVDKYIGESARLIREMFGYA-----------------------------KEHEPCIIF 233
Query: 339 MDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
MDEID+IG R G+ D E+QRT++ELLNQLDGF+
Sbjct: 234 MDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFD 270
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 34/46 (73%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA E F++V S +V K+IGE +R++RE+F A+
Sbjct: 180 TGKTLLARAVASSLETNFLKVVSSAIVDKYIGESARLIREMFGYAK 225
>gi|297791633|ref|XP_002863701.1| regulatory particle triple-a 4A [Arabidopsis lyrata subsp. lyrata]
gi|297309536|gb|EFH39960.1| regulatory particle triple-a 4A [Arabidopsis lyrata subsp. lyrata]
Length = 400
Score = 220 bits (561), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 121/308 (39%), Positives = 179/308 (58%), Gaps = 39/308 (12%)
Query: 71 DVDEAIKSSEGFKPYYVTKI---EELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQL 127
DVDE+++ Y K+ +EL+ V +NLR + + N+ ++L+
Sbjct: 3 DVDESVRRRTAAVSEYRKKLLQHKELESRVRTARENLRGAKKEFNKTE-------DDLKS 55
Query: 128 LQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHK 187
LQ G +GEV++P+D ++++VK ++VV +D +T RV L + T+ +
Sbjct: 56 LQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMR 115
Query: 188 ILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKG 247
LP +VDP+V M+ E + +Y VGGL +QI+E++E IELP+ +PELF +GI PK
Sbjct: 116 ALPREVDPVVYNMLHEDPGNISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKC 175
Query: 248 VLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAF 307
VLLYGPPGTGKTLLARA+A + + F++V S ++ K+IGE +R++RE+F A
Sbjct: 176 VLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYA------- 228
Query: 308 AHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLEL 367
REH P IIFMDEID+IG R G+ D E+QRT++EL
Sbjct: 229 ----------------------REHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMEL 266
Query: 368 LNQLDGFE 375
LNQLDGF+
Sbjct: 267 LNQLDGFD 274
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 35/46 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARA+A + + F++V S ++ K+IGE +R++RE+F AR
Sbjct: 184 TGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAR 229
>gi|300124005|emb|CBK25276.2| unnamed protein product [Blastocystis hominis]
Length = 388
Score = 220 bits (561), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 112/254 (44%), Positives = 160/254 (62%), Gaps = 29/254 (11%)
Query: 121 LREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRN 180
++ +L Q G +G+VV ++ ++VLVK+ ++VV++ K++D++ + RVAL
Sbjct: 39 IKRKLTAFQSVGHSIGDVVCVLNDEEVLVKLSLGSRYVVNVKKSVDMSSLQQGTRVALDT 98
Query: 181 ESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDAL 240
+ + + LP KVDP VS MM E + +GGL++QI+EI+EVIELP+ PE F
Sbjct: 99 TTKMIMQSLPPKVDPSVSAMMEESTEQIKWSDIGGLNDQIREIREVIELPLVRPEFFVRT 158
Query: 241 GIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
GI PKGVLLYGPPGTGKTL+A+A+A + TFI+ S L++K++GE SR+VRELF A
Sbjct: 159 GIKAPKGVLLYGPPGTGKTLIAKALASSIKATFIKTVASSLIEKYVGESSRVVRELFNYA 218
Query: 301 SLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEV 360
R+H P+++F+DEID+IGS R E+GSG D E+
Sbjct: 219 -----------------------------RQHTPAVVFIDEIDAIGSKRRENGSGADREI 249
Query: 361 QRTMLELLNQLDGF 374
QR M+ELLNQLDGF
Sbjct: 250 QRAMMELLNQLDGF 263
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 35/46 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTL+A+A+A + TFI+ S L++K++GE SR+VRELF AR
Sbjct: 174 TGKTLIAKALASSIKATFIKTVASSLIEKYVGESSRVVRELFNYAR 219
>gi|209879531|ref|XP_002141206.1| 26S proteasome subunit 4 [Cryptosporidium muris RN66]
gi|209556812|gb|EEA06857.1| 26S proteasome subunit 4, putative [Cryptosporidium muris RN66]
Length = 447
Score = 220 bits (561), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 109/242 (45%), Positives = 162/242 (66%), Gaps = 29/242 (11%)
Query: 135 VGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVD 194
+G + + +D+ +V ++ V+I +D + + P V L N+ Y++ I+ ++VD
Sbjct: 116 IGNLEEIIDENHAIVSSSVGSEYYVNILSFVDKSQLQPGSSVLLHNKVYSIVGIMSDEVD 175
Query: 195 PLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPP 254
PLV++M V+K P +Y +GGL+ QI+EIKE +E+P+ HPEL+D +GI PKGV+LYGPP
Sbjct: 176 PLVTVMKVDKAPLESYADIGGLEQQIQEIKEAVEIPLTHPELYDDIGIKPPKGVILYGPP 235
Query: 255 GTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLF 314
GTGKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 236 GTGKTLLAKAVANETSATFLRVVGSELIQKYLGDGPKLVRELFRVAE------------- 282
Query: 315 WSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGF 374
E+APSI+F+DEID++G+ R ++ SGG+ ++QRTMLELLNQLDGF
Sbjct: 283 ----------------ENAPSIVFIDEIDAVGTKRHDAHSGGERDIQRTMLELLNQLDGF 326
Query: 375 EA 376
E+
Sbjct: 327 ES 328
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 237 TGKTLLAKAVANETSATFLRVVGSELIQKYLGDGPKLVRELFRVA 281
>gi|224008308|ref|XP_002293113.1| 26S proteasome ATPase regulatory subunit [Thalassiosira pseudonana
CCMP1335]
gi|220971239|gb|EED89574.1| 26S proteasome ATPase regulatory subunit [Thalassiosira pseudonana
CCMP1335]
Length = 413
Score = 220 bits (561), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 123/311 (39%), Positives = 177/311 (56%), Gaps = 39/311 (12%)
Query: 71 DVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQE 130
DV A+ + Y KI E + E E L+R++ L A+ + ++L LQ
Sbjct: 15 DVAPAVSERDQVLEQYRAKIREHR----ETEARLKRMREDVKGLVARYQKTEDDLTALQS 70
Query: 131 QGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILP 190
G +G+V+K +D + +VK ++VV ++ + + P RVAL + T+ +ILP
Sbjct: 71 VGQIIGDVLKRLDNDRFIVKASSGPRYVVGCRSRLNQDKLKPGTRVALDMTTLTIMRILP 130
Query: 191 NKVDPLVSLMMVEKVPDS------TYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQ 244
+VDP V M + D +Y +GGL+ QI+E++EVIELP+ +PELF +GI
Sbjct: 131 REVDPTVFHMQSTEEEDEKGGKKVSYSDIGGLNEQIRELREVIELPLTNPELFIRVGIKA 190
Query: 245 PKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKK 304
PKGVLLYGPPGTGKTLLARA+A + TF++V S +V K+IGE +R++RE+F A
Sbjct: 191 PKGVLLYGPPGTGKTLLARALASNISATFLKVVASAIVDKYIGESARIIREMFGFA---- 246
Query: 305 LAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTM 364
R+H P +IFMDEID+IG SR G+ D E+QRT+
Sbjct: 247 -------------------------RDHQPCVIFMDEIDAIGGSRFSEGTSADREIQRTL 281
Query: 365 LELLNQLDGFE 375
+ELLNQ+DGFE
Sbjct: 282 MELLNQMDGFE 292
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 35/46 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARA+A + TF++V S +V K+IGE +R++RE+F AR
Sbjct: 202 TGKTLLARALASNISATFLKVVASAIVDKYIGESARIIREMFGFAR 247
>gi|348537164|ref|XP_003456065.1| PREDICTED: 26S protease regulatory subunit 10B [Oreochromis
niloticus]
Length = 389
Score = 220 bits (561), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 117/278 (42%), Positives = 163/278 (58%), Gaps = 29/278 (10%)
Query: 99 EKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFV 158
E + L+ L+ Q E + +L+ LQ G VGEV+K + ++K +VK ++V
Sbjct: 21 EVDGRLKELREQLREQTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYV 80
Query: 159 VDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDN 218
V + +D + + P RVAL + T+ + LP +VDPLV M E +Y +GGL
Sbjct: 81 VGCRRQLDKSQLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGSVSYSEIGGLSE 140
Query: 219 QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSG 278
QI+E++EVIELP+ +PELF +GI PKG LLYGPPGTGKTLLARAVA +C F++V
Sbjct: 141 QIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVS 200
Query: 279 SELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIF 338
S +V K+IGE +R++RE+F A R+H P IIF
Sbjct: 201 SSIVDKYIGESARLIREMFNYA-----------------------------RDHQPCIIF 231
Query: 339 MDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
MDEID+IG R G+ D E+QRT++ELLNQ+DGF+
Sbjct: 232 MDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDT 269
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 35/46 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA +C F++V S +V K+IGE +R++RE+F AR
Sbjct: 178 TGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYAR 223
>gi|302675238|ref|XP_003027303.1| hypothetical protein SCHCODRAFT_238082 [Schizophyllum commune H4-8]
gi|300100989|gb|EFI92400.1| hypothetical protein SCHCODRAFT_238082 [Schizophyllum commune H4-8]
Length = 446
Score = 220 bits (561), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 121/291 (41%), Positives = 182/291 (62%), Gaps = 37/291 (12%)
Query: 89 KIEELQLIVAEKEQNLRRLQAQ-RNELNAKVRMLREELQLLQEQGS--YVGEVVKPMDKK 145
+I++ L+ E QN RL+ + R E N + R ++L+ GS VG + + +D
Sbjct: 71 RIKDYLLMEEEFIQNQERLKPETREEKNEEDRSKVDDLR-----GSPMAVGTMEEIVDDD 125
Query: 146 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
++ +F V I +D + + P C+V L +++ ++ +L + DP+VS+M ++K
Sbjct: 126 HAIISTSSGPEFYVSIMSYVDKDLLEPGCQVLLHHKTQSIVGVLQDDADPMVSVMKLDKA 185
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
P +Y +GGL+ QI+EIKE +ELP+ HPEL++ +GI PKGV+LYG PGTGKTLLA+AV
Sbjct: 186 PTESYADIGGLEQQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGVPGTGKTLLAKAV 245
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTI 325
A+ T TF+R+ GSEL+QK++G+G ++VRELF +A
Sbjct: 246 ANQTSATFLRIVGSELIQKYLGDGPKLVRELFRVAE------------------------ 281
Query: 326 VCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
EHAPSI+F+DEID++G+ R +S SGG+ E+QRTMLELLNQLDGF+
Sbjct: 282 -----EHAPSIVFIDEIDAVGTKRYDSTSGGEREIQRTMLELLNQLDGFDT 327
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+R+ GSEL+QK++G+G ++VRELF +A
Sbjct: 236 TGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPKLVRELFRVA 280
>gi|221127943|ref|XP_002165829.1| PREDICTED: 26S protease regulatory subunit 4-like [Hydra
magnipapillata]
Length = 441
Score = 220 bits (561), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 120/288 (41%), Positives = 176/288 (61%), Gaps = 33/288 (11%)
Query: 89 KIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVL 148
+I++ L+ E QN RL+ Q + + R ++ L+ VG + + +D +
Sbjct: 68 RIKDFLLMEEEFIQNQERLKPQEEKHEEE----RSKVDDLRGTPMSVGSLEEIIDDNHAI 123
Query: 149 VKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDS 208
V + V+I +D + + P C V L ++ + + +L DP+VS+M +EK P
Sbjct: 124 VSTSVGSEHYVNILSFVDKDLLEPGCSVLLNHKVHAVVGVLGEDTDPMVSVMKLEKAPTE 183
Query: 209 TYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH 268
TY +GGLD QI+EIKE +ELP+ HPEL++ +GI PKGV+LYG PGTGKTLLA+AVA+
Sbjct: 184 TYADIGGLDTQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGEPGTGKTLLAKAVANQ 243
Query: 269 TECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCN 328
T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 244 TSATFLRVVGSELIQKYLGDGPKLVRELFRVAE--------------------------- 276
Query: 329 FREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
EH+PSI+F+DEID++G+ R +S SGG+ E+QRTMLELLNQLDGF++
Sbjct: 277 --EHSPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDS 322
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 231 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 275
>gi|15219503|ref|NP_175120.1| AAA-type ATPase family protein [Arabidopsis thaliana]
gi|297846852|ref|XP_002891307.1| hypothetical protein ARALYDRAFT_891428 [Arabidopsis lyrata subsp.
lyrata]
gi|75336159|sp|Q9MAK9.1|PS10B_ARATH RecName: Full=26S protease regulatory subunit S10B homolog B;
AltName: Full=26S proteasome AAA-ATPase subunit RPT4b;
AltName: Full=26S proteasome subunit S10B homolog B;
AltName: Full=Regulatory particle triple-A ATPase
subunit 4b
gi|7767657|gb|AAF69154.1|AC007915_6 F27F5.8 [Arabidopsis thaliana]
gi|17065266|gb|AAL32787.1| similar to 26S proteasome AAA-ATPase subunit RPT4a [Arabidopsis
thaliana]
gi|21387177|gb|AAM47992.1| 26S proteasome AAA-ATPase subunit RPT4a-like protein [Arabidopsis
thaliana]
gi|297337149|gb|EFH67566.1| hypothetical protein ARALYDRAFT_891428 [Arabidopsis lyrata subsp.
lyrata]
gi|332193951|gb|AEE32072.1| AAA-type ATPase family protein [Arabidopsis thaliana]
Length = 399
Score = 220 bits (561), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 123/308 (39%), Positives = 178/308 (57%), Gaps = 39/308 (12%)
Query: 71 DVDEAIKSSEGFKPYYVTKI---EELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQL 127
D D+A + Y K+ +EL+ V +NLR A + E N ++L+
Sbjct: 3 DGDDAARRRTAAVTDYRKKLLHHKELESRVRTARENLR---AAKKEFNKT----EDDLKS 55
Query: 128 LQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHK 187
LQ G +GEV++P+D ++++VK ++VV +D +T RV L + T+ +
Sbjct: 56 LQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMR 115
Query: 188 ILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKG 247
LP +VDP+V M+ E + +Y VGGL +QI+E++E IELP+ +PELF +GI PKG
Sbjct: 116 ALPREVDPVVYNMLHEDPGNISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKG 175
Query: 248 VLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAF 307
VLLYGPPGTGKTLLARA+A + + F++V S ++ K+IGE +R++RE+F A
Sbjct: 176 VLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYA------- 228
Query: 308 AHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLEL 367
REH P IIFMDEID+IG R G+ D E+QRT++EL
Sbjct: 229 ----------------------REHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMEL 266
Query: 368 LNQLDGFE 375
LNQLDGF+
Sbjct: 267 LNQLDGFD 274
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 35/46 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARA+A + + F++V S ++ K+IGE +R++RE+F AR
Sbjct: 184 TGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAR 229
>gi|229367834|gb|ACQ58897.1| 26S protease regulatory subunit S10B [Anoplopoma fimbria]
Length = 389
Score = 220 bits (561), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 118/289 (40%), Positives = 168/289 (58%), Gaps = 43/289 (14%)
Query: 102 QNLRRLQAQRNELNAKVRMLRE--------------ELQLLQEQGSYVGEVVKPMDKKKV 147
Q+ R+ + E++ +++ LRE +L+ LQ G VGEV+K + ++K
Sbjct: 10 QDYRKKLLEHKEIDGRLKELREQLREQTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKF 69
Query: 148 LVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPD 207
+VK ++VV + +D + + P RVAL + T+ + LP +VDPLV M E
Sbjct: 70 IVKATNGPRYVVGCRRQLDKSQLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGS 129
Query: 208 STYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAH 267
+Y +GGL QI+E++EVIELP+ +PELF +GI PKG LLYGPPGTGKTLLARAVA
Sbjct: 130 VSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVAS 189
Query: 268 HTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVC 327
+C F++V S +V K+IGE +R++RE+F A
Sbjct: 190 QLDCNFLKVVSSSIVDKYIGESARLIREMFNYA--------------------------- 222
Query: 328 NFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
R+H P IIFMDEID+IG R G+ D E+QRT++ELLNQ+DGF+
Sbjct: 223 --RDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDT 269
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 35/46 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA +C F++V S +V K+IGE +R++RE+F AR
Sbjct: 178 TGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYAR 223
>gi|442753613|gb|JAA68966.1| Putative 26s proteasome regulatory complex atpase rpt4 [Ixodes
ricinus]
Length = 404
Score = 220 bits (561), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 117/278 (42%), Positives = 165/278 (59%), Gaps = 29/278 (10%)
Query: 99 EKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFV 158
E E L+ ++ Q ELN + +L+ LQ G VGEV+K + ++K +VK ++V
Sbjct: 36 EIESRLKEMREQLKELNKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYV 95
Query: 159 VDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDN 218
V + +D + RVAL + T+ + LP +VDPLV M E + +Y M+GGL
Sbjct: 96 VGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNISYSMIGGLGE 155
Query: 219 QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSG 278
QI+E++EVIELP+ +PELF +GI PKG LLYGPPGTGKTLLARAVA + F++V
Sbjct: 156 QIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVATQIDANFLKVVS 215
Query: 279 SELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIF 338
S +V K+IGE +R++RE+F A R+H P +IF
Sbjct: 216 SAIVDKYIGESARLIREMFNYA-----------------------------RDHQPCVIF 246
Query: 339 MDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
MDEID+IG R G+ D E+QRT++ELLNQ+DGF++
Sbjct: 247 MDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDS 284
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 34/46 (73%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA + F++V S +V K+IGE +R++RE+F AR
Sbjct: 193 TGKTLLARAVATQIDANFLKVVSSAIVDKYIGESARLIREMFNYAR 238
>gi|449504593|ref|XP_002200452.2| PREDICTED: 26S protease regulatory subunit 10B [Taeniopygia
guttata]
Length = 391
Score = 220 bits (561), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 118/271 (43%), Positives = 162/271 (59%), Gaps = 32/271 (11%)
Query: 106 RLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNI 165
RL+ Q EL + +L+ LQ G VGEV+K + ++K +VK ++VV + +
Sbjct: 33 RLREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGV---L 89
Query: 166 DINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKE 225
D + + P RVAL + T+ + LP +VDPLV M E D +Y +GGL QI+E++E
Sbjct: 90 DKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDVSYSEIGGLSEQIRELRE 149
Query: 226 VIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKF 285
VIELP+ +PELF +GI PKG LLYGPPGTGKTLLARAVA +C F++V S +V K+
Sbjct: 150 VIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKY 209
Query: 286 IGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSI 345
IGE +R++RE+F A R+H P IIFMDEID+I
Sbjct: 210 IGESARLIREMFNYA-----------------------------RDHQPCIIFMDEIDAI 240
Query: 346 GSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
G R G+ D E+QRT++ELLNQ+DGF+
Sbjct: 241 GGRRFSEGTSADREIQRTLMELLNQMDGFDT 271
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 35/46 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA +C F++V S +V K+IGE +R++RE+F AR
Sbjct: 180 TGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYAR 225
>gi|168017225|ref|XP_001761148.1| 26S proteasome regulatory complex, ATPase RPT4 [Physcomitrella
patens subsp. patens]
gi|162687488|gb|EDQ73870.1| 26S proteasome regulatory complex, ATPase RPT4 [Physcomitrella
patens subsp. patens]
Length = 392
Score = 220 bits (561), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 118/285 (41%), Positives = 168/285 (58%), Gaps = 43/285 (15%)
Query: 105 RRLQAQRNELNAKVRMLRE--------------ELQLLQEQGSYVGEVVKPMDKKKVLVK 150
RR Q EL+A++R LRE +L+ LQ G +GEV++ +D ++++VK
Sbjct: 12 RRKLLQHKELDARLRNLRENVKAARKEFDKTEDDLKALQSVGQIIGEVLRQLDSERLIVK 71
Query: 151 VHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTY 210
++VV +D + RVAL + T+ + LP +VDP+V M+ E + +Y
Sbjct: 72 ASSGPRYVVGCRNKVDKEKLVAGTRVALDMTTLTIMRALPREVDPVVYNMLHEDPGNISY 131
Query: 211 EMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTE 270
VGGL +QI+E++E IELP+ +PELF +GI PKGVLLYGPPGTGKTLLARA+A + +
Sbjct: 132 SAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNID 191
Query: 271 CTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFR 330
F++V S +V K+IGE +R++RE+F A R
Sbjct: 192 ANFLKVVSSAIVDKYIGESARLIREMFSYA-----------------------------R 222
Query: 331 EHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
+H P IIFMDEID+IG R G+ D E+QRT++ELLNQLDGF+
Sbjct: 223 DHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFD 267
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 35/46 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARA+A + + F++V S +V K+IGE +R++RE+F AR
Sbjct: 177 TGKTLLARAIASNIDANFLKVVSSAIVDKYIGESARLIREMFSYAR 222
>gi|50422143|ref|XP_459634.1| DEHA2E07436p [Debaryomyces hansenii CBS767]
gi|49655302|emb|CAG87864.1| DEHA2E07436p [Debaryomyces hansenii CBS767]
Length = 446
Score = 220 bits (561), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 113/233 (48%), Positives = 150/233 (64%), Gaps = 29/233 (12%)
Query: 143 DKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMV 202
+K K ++ + KFVV + + + D+ RV + + Y + LP ++DP V++M V
Sbjct: 120 NKSKYVINIKQIAKFVVGLGERVSPTDIEEGMRVGVDRQKYEIQLPLPPRIDPSVTMMTV 179
Query: 203 EKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 262
E+ PD TY VGG +QI++++EV+ELP+ PE F LGI PKG+LLYGPPGTGKTL A
Sbjct: 180 EEKPDVTYSDVGGCKDQIEKLREVVELPLLSPERFVKLGIDPPKGILLYGPPGTGKTLCA 239
Query: 263 RAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILT 322
RAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 240 RAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKK------------------ 281
Query: 323 NTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C I+F DEID+IG +R + G+GGD+EVQRTMLEL+ QLDGF+
Sbjct: 282 ---AC--------IVFFDEIDAIGGARFDDGAGGDNEVQRTMLELITQLDGFD 323
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 233 TGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTK 280
>gi|259484776|tpe|CBF81287.1| TPA: hypothetical protein similar to PSMC6 subunit (Broad)
[Aspergillus nidulans FGSC A4]
Length = 393
Score = 220 bits (561), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 118/281 (41%), Positives = 169/281 (60%), Gaps = 29/281 (10%)
Query: 95 LIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPE 154
L + E E L+ L+ +L + + E ++ LQ G +GEV+K +D+++ +VK
Sbjct: 21 LDLREWEAKLKALRMGIKDLQREFDISEENIKALQSVGQIIGEVLKQLDEERFIVKASSG 80
Query: 155 GKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVG 214
++VV +D + + RVAL + T+ ++LP +VDPLV M +E + +G
Sbjct: 81 PRYVVGCRSKVDRSKLKQGTRVALDMTTLTIMRMLPREVDPLVYNMSLEDPGQINFAGIG 140
Query: 215 GLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFI 274
GL++QI+E++EVIELP+K+PELF +GI PKGVLLYGPPGTGKTLLARAVA E F+
Sbjct: 141 GLNDQIRELREVIELPLKNPELFQRVGIKPPKGVLLYGPPGTGKTLLARAVASSMETNFL 200
Query: 275 RVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAP 334
+V S +V K+IGE +R++RE+F A +EH P
Sbjct: 201 KVVSSAIVDKYIGESARLIREMFGYA-----------------------------KEHEP 231
Query: 335 SIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
IIFMDEID+IG R G+ D E+QRT++ELLNQLDGF+
Sbjct: 232 CIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFD 272
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 34/46 (73%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA E F++V S +V K+IGE +R++RE+F A+
Sbjct: 182 TGKTLLARAVASSMETNFLKVVSSAIVDKYIGESARLIREMFGYAK 227
>gi|392564425|gb|EIW57603.1| 26S proteasome subunit P45 [Trametes versicolor FP-101664 SS1]
Length = 448
Score = 220 bits (561), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 123/291 (42%), Positives = 181/291 (62%), Gaps = 38/291 (13%)
Query: 89 KIEELQLIVAEKEQNLRRLQAQ--RNELNAKVRMLREELQLLQEQGS--YVGEVVKPMDK 144
+I++ L+ E QN RL+ + R E N + R ++L+ GS VG + + +D
Sbjct: 72 RIKDYLLMEEEFIQNQERLKPESAREEKNEEDRTKVDDLR-----GSPMAVGTLEEIIDD 126
Query: 145 KKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEK 204
++ +F V I +D + + P C+V L +++ + +L + DP+VS+M ++K
Sbjct: 127 DHAIISTASGPEFYVSIMSFVDKDLLEPGCQVLLHHKNQAVVGVLQDDADPMVSVMKLDK 186
Query: 205 VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 264
P +Y +GGL+ QI+EIKE +ELP+ HPEL++ +GI PKGV+LYG PGTGKTLLA+A
Sbjct: 187 APTESYADIGGLEQQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGVPGTGKTLLAKA 246
Query: 265 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNT 324
VA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 247 VANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAE----------------------- 283
Query: 325 IVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
EHAPSI+F+DEID+IG+ R +S SGG+ E+QRTMLELLNQLDGF+
Sbjct: 284 ------EHAPSIVFIDEIDAIGTKRYDSTSGGEREIQRTMLELLNQLDGFD 328
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 238 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 282
>gi|169626507|ref|XP_001806653.1| hypothetical protein SNOG_16544 [Phaeosphaeria nodorum SN15]
gi|111054964|gb|EAT76084.1| hypothetical protein SNOG_16544 [Phaeosphaeria nodorum SN15]
Length = 439
Score = 220 bits (561), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 120/264 (45%), Positives = 161/264 (60%), Gaps = 29/264 (10%)
Query: 113 ELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTP 172
++ A + ++EE L + + + + K +K K ++ V KFVV++ + D+
Sbjct: 83 DIAADRQRMQEEQPLQVARCTKIIQDDKDSEKSKYVINVKQIAKFVVNLGDRVSPTDIEE 142
Query: 173 NCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVK 232
RV + Y + LP K+DP V++M VE PD TY VGG QI++++EV+E+P+
Sbjct: 143 GMRVGVDRNKYQILLPLPPKIDPSVTMMTVEDKPDVTYGDVGGCKEQIEKLREVVEMPLL 202
Query: 233 HPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRM 292
PE F LGI PKG LLYGPPGTGKTL ARAVA+ T+ TFIRV GSELVQK++GEG+RM
Sbjct: 203 SPERFVNLGIDPPKGALLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARM 262
Query: 293 VRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIES 352
VRELF MA KK C IIF DEID++G +R +
Sbjct: 263 VRELFEMARTKK---------------------AC--------IIFFDEIDAVGGARFDD 293
Query: 353 GSGGDSEVQRTMLELLNQLDGFEA 376
G+GGD+EVQRTMLEL+ QLDGF+A
Sbjct: 294 GAGGDNEVQRTMLELITQLDGFDA 317
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 226 TGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTK 273
>gi|118383904|ref|XP_001025106.1| 26S proteasome subunit P45 family protein [Tetrahymena thermophila]
gi|89306873|gb|EAS04861.1| 26S proteasome subunit P45 family protein [Tetrahymena thermophila
SB210]
Length = 390
Score = 220 bits (561), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 114/278 (41%), Positives = 173/278 (62%), Gaps = 29/278 (10%)
Query: 101 EQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVD 160
E +L++ + +LN ++ ++L+ +Q G +GEV+K ++++K +VK ++VV
Sbjct: 23 EIDLKKQRFNLRDLNKQLDKTDDQLKAIQSVGQPIGEVLKQINEEKYIVKSSSGPRYVVG 82
Query: 161 IDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQI 220
+ I+ + RVAL +YT+ +ILP +VDP+V M+ E T++ VGGLD+QI
Sbjct: 83 VKSKINREKLVIGARVALDQNTYTIVRILPREVDPMVYHMLHEDPGKVTFDDVGGLDDQI 142
Query: 221 KEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSE 280
+ ++E IELP+ +PELF +G+ PKG L+YGPPGTGKTL+ARA+A++ + F++V S
Sbjct: 143 RTLRETIELPITNPELFRRVGVKPPKGCLMYGPPGTGKTLIARALANNVDAKFLKVVASG 202
Query: 281 LVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMD 340
+V K+IGE +R++RE+F AFA REH P IIFMD
Sbjct: 203 IVDKYIGESARVIREMF--------AFA---------------------REHEPCIIFMD 233
Query: 341 EIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 378
EID+IG R GS D E+QRT++ELLNQ+DGF+ K
Sbjct: 234 EIDAIGGRRFSEGSSADREIQRTLMELLNQIDGFDDLK 271
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 36/46 (78%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTL+ARA+A++ + F++V S +V K+IGE +R++RE+F AR
Sbjct: 178 TGKTLIARALANNVDAKFLKVVASGIVDKYIGESARVIREMFAFAR 223
>gi|12852148|dbj|BAB29293.1| unnamed protein product [Mus musculus]
Length = 389
Score = 220 bits (561), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 117/279 (41%), Positives = 166/279 (59%), Gaps = 31/279 (11%)
Query: 99 EKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFV 158
E + L+ L+ Q EL + +L+ LQ G VGEV+K + ++K +VK ++V
Sbjct: 21 EIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYV 80
Query: 159 VDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDN 218
V + +D + + P RVAL + T+ + LP +VDPLV M E + +Y +GGL
Sbjct: 81 VGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSE 140
Query: 219 QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSG 278
QI++++EVIELP+ +PELF +GI PKG LLYGPPGTGKTLLARAVA +C F++V
Sbjct: 141 QIRDLREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVS 200
Query: 279 SELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNF-REHAPSII 337
S +V K+IGE +R++RE+F N+ R+H P II
Sbjct: 201 SSIVDKYIGESARLIREMF------------------------------NYVRDHQPCII 230
Query: 338 FMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
FMDEID+IG R G+ D E+QRT++ELLNQ+DGF+
Sbjct: 231 FMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDT 269
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 34/46 (73%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA +C F++V S +V K+IGE +R++RE+F R
Sbjct: 178 TGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYVR 223
>gi|345567910|gb|EGX50812.1| hypothetical protein AOL_s00054g898 [Arthrobotrys oligospora ATCC
24927]
Length = 393
Score = 220 bits (560), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 119/277 (42%), Positives = 165/277 (59%), Gaps = 29/277 (10%)
Query: 99 EKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFV 158
E + L+ L+ + L E L+ LQ G VGEV+K +D +++LVK ++V
Sbjct: 25 EWDAKLKSLRLELKSLQKSYDHTEENLKALQSVGQIVGEVLKQIDDERILVKASSGPRYV 84
Query: 159 VDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDN 218
V +D + + RVAL + T+ ++LP +VDPLV M +E ++ +GGL+
Sbjct: 85 VGCRSKVDKSKLKQGTRVALDMTTLTIMRMLPREVDPLVYNMSLEDPGQVSFGGIGGLNE 144
Query: 219 QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSG 278
QI+E++EVIELP+K+PELF +GI PKGVLLYGPPGTGKTLLARAVA E F++V
Sbjct: 145 QIRELREVIELPLKNPELFIRVGIKPPKGVLLYGPPGTGKTLLARAVASTLETNFLKVVS 204
Query: 279 SELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIF 338
S +V K+IGE +R++RE+F A +EH P IIF
Sbjct: 205 SAIVDKYIGESARLIREMFGYA-----------------------------KEHEPCIIF 235
Query: 339 MDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
MDEID+IG R G+ D E+QRT++ELLNQLDGF+
Sbjct: 236 MDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFD 272
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 34/46 (73%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA E F++V S +V K+IGE +R++RE+F A+
Sbjct: 182 TGKTLLARAVASTLETNFLKVVSSAIVDKYIGESARLIREMFGYAK 227
>gi|389642247|ref|XP_003718756.1| 26S protease subunit rpt4 [Magnaporthe oryzae 70-15]
gi|351641309|gb|EHA49172.1| 26S protease subunit rpt4 [Magnaporthe oryzae 70-15]
gi|440468085|gb|ELQ37268.1| proteasome-activating nucleotidase [Magnaporthe oryzae Y34]
gi|440489045|gb|ELQ68726.1| proteasome-activating nucleotidase [Magnaporthe oryzae P131]
Length = 391
Score = 220 bits (560), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 117/277 (42%), Positives = 165/277 (59%), Gaps = 29/277 (10%)
Query: 99 EKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFV 158
E E L+ L+ + L E ++ LQ G +GEV+K +D ++ +VK ++V
Sbjct: 23 EWESKLKNLRIEIKGLQKDFDQTEENIKALQSVGQIIGEVLKQLDDERFIVKASSGPRYV 82
Query: 159 VDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDN 218
V +D + + RVAL + T+ ++LP +VDPLV M +E ++ +GGL++
Sbjct: 83 VGCRSKVDKDKLKQGTRVALDMTTLTIMRMLPREVDPLVYNMSLEDPGQVSFAGIGGLND 142
Query: 219 QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSG 278
QI+E++EVIELP+K+PELF +GI PKGVLLYGPPGTGKTLLARAVA E F++V
Sbjct: 143 QIRELREVIELPLKNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAVASSLETNFLKVVS 202
Query: 279 SELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIF 338
S +V K+IGE +R++RE+F A +EH P IIF
Sbjct: 203 SAIVDKYIGESARLIREMFGYA-----------------------------KEHEPCIIF 233
Query: 339 MDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
MDEID+IG R G+ D E+QRT++ELLNQLDGF+
Sbjct: 234 MDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFD 270
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 34/46 (73%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA E F++V S +V K+IGE +R++RE+F A+
Sbjct: 180 TGKTLLARAVASSLETNFLKVVSSAIVDKYIGESARLIREMFGYAK 225
>gi|390961498|ref|YP_006425332.1| proteasome-activating nucleotidase [Thermococcus sp. CL1]
gi|390519806|gb|AFL95538.1| proteasome-activating nucleotidase [Thermococcus sp. CL1]
Length = 398
Score = 220 bits (560), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 119/297 (40%), Positives = 183/297 (61%), Gaps = 31/297 (10%)
Query: 81 GFKPY--YVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEV 138
G KP Y + L+ + + E +R L+A + L ++ LR E+ L++ ++ G +
Sbjct: 7 GVKPSDEYDDYVTYLKRRIRQLELQVRTLEADKERLERELSRLRMEMSRLRQPPAFAGTL 66
Query: 139 VKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVS 198
++ +D + +V+ +FVV I I+ + + P RVAL + + ++LP++ DP V
Sbjct: 67 LEVLDDDRAIVQNFNGPRFVVRIAPWIERDKLKPGSRVALDQRTMAVVELLPSEKDPSVL 126
Query: 199 LMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGK 258
V + P +Y+ +GGLD Q++E++E IELP+KHPELF+ +GI PKGVLLYGPPG GK
Sbjct: 127 GFEVIERPKVSYDDIGGLDKQLQELREAIELPLKHPELFERVGIEPPKGVLLYGPPGCGK 186
Query: 259 TLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLL 318
TL+A+A+AH TFIRV GSELV+KFIGEG+R+V ELF +A
Sbjct: 187 TLMAKALAHEANATFIRVVGSELVRKFIGEGARLVHELFELA------------------ 228
Query: 319 TILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
+E AP+IIF+DEID+IG+ R++ +GG+ EV RT+++LL ++DGF+
Sbjct: 229 -----------KEKAPTIIFIDEIDAIGAKRMDETTGGEREVNRTLMQLLAEMDGFD 274
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 40/50 (80%)
Query: 13 GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
GKTL+A+A+AH TFIRV GSELV+KFIGEG+R+V ELF +A+ K +
Sbjct: 185 GKTLMAKALAHEANATFIRVVGSELVRKFIGEGARLVHELFELAKEKAPT 234
>gi|198418062|ref|XP_002127866.1| PREDICTED: similar to AGAP003215-PA [Ciona intestinalis]
Length = 443
Score = 220 bits (560), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 112/242 (46%), Positives = 156/242 (64%), Gaps = 29/242 (11%)
Query: 135 VGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVD 194
VG + + +D+ +V + V I +D + + P C V + ++ + + L + VD
Sbjct: 112 VGTLEEIIDENHAIVSTSVGSEHYVSILSFVDKDLLEPGCTVLMNHKVHAVVGFLGDDVD 171
Query: 195 PLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPP 254
PLV++M +EK P +Y +GGLD QI EIKE +ELP+ HPE ++ +GI PKGV+LYGPP
Sbjct: 172 PLVTVMKLEKAPKESYADIGGLDTQITEIKESVELPLTHPEYYEEMGIKPPKGVILYGPP 231
Query: 255 GTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLF 314
GTGKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 232 GTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAE------------- 278
Query: 315 WSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGF 374
EHAPSI+F+DEID+IG+ R ES SGG+ E+QRTMLELLNQLDGF
Sbjct: 279 ----------------EHAPSIVFIDEIDAIGTKRYESNSGGEREIQRTMLELLNQLDGF 322
Query: 375 EA 376
++
Sbjct: 323 DS 324
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 233 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 277
>gi|389625377|ref|XP_003710342.1| 26S protease regulatory subunit 4 [Magnaporthe oryzae 70-15]
gi|351649871|gb|EHA57730.1| 26S protease regulatory subunit 4 [Magnaporthe oryzae 70-15]
gi|440471361|gb|ELQ40381.1| 26S protease regulatory subunit 4 [Magnaporthe oryzae Y34]
gi|440487997|gb|ELQ67753.1| 26S protease regulatory subunit 4 [Magnaporthe oryzae P131]
Length = 459
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 119/285 (41%), Positives = 180/285 (63%), Gaps = 37/285 (12%)
Query: 99 EKEQNLRRLQAQRN------ELNAKVRMLREELQLLQEQGS--YVGEVVKPMDKKKVLVK 150
E ++ LRR++A ++ +L+A RM E ++ +GS VG + + +D +V
Sbjct: 84 ENQERLRRVKAAKDSNAPASDLDAGDRMADERGRVDDMRGSPMGVGTLEEMIDDDHAIVS 143
Query: 151 VHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTY 210
++ V I +D + + P V L ++S ++ +L + DPLVS+M ++K P +Y
Sbjct: 144 STTGPEYYVSIMSFVDKDLLEPGASVLLHHKSVSIVGVLTDDADPLVSVMKLDKAPTESY 203
Query: 211 EMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTE 270
+GGL+ QI+E++E +ELP+ HPEL++ +GI PKGV+LYG PGTGKTLLA+AVA+ T
Sbjct: 204 ADIGGLEQQIQEVRESVELPLLHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTS 263
Query: 271 CTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFR 330
TF+R+ GSEL+QK++G+G R+VR+LF +A+
Sbjct: 264 ATFLRIVGSELIQKYLGDGPRLVRQLFQVAA----------------------------- 294
Query: 331 EHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
E+APSI+F+DEID+IG+ R +S SGG+ EVQRTMLELLNQLDGF+
Sbjct: 295 ENAPSIVFIDEIDAIGTKRYDSTSGGEREVQRTMLELLNQLDGFD 339
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+R+ GSEL+QK++G+G R+VR+LF +A
Sbjct: 249 TGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPRLVRQLFQVA 293
>gi|225709404|gb|ACO10548.1| 26S protease regulatory subunit 4 [Caligus rogercresseyi]
Length = 440
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 118/276 (42%), Positives = 167/276 (60%), Gaps = 29/276 (10%)
Query: 101 EQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVD 160
E+ R Q Q L K R ++ L+ VG + + +D +V + V
Sbjct: 75 EEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGNLEEIIDDNHAIVSTSVGSEHYVS 134
Query: 161 IDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQI 220
I +D + + P C V L ++ + + +L + DPLV++M VEK P TY +GGLD+QI
Sbjct: 135 ILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDSQI 194
Query: 221 KEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSE 280
+EIKE +ELP+ HPE ++ +GI PKGV+LYG PGTGKTLL +AVA+ T TF+RV GSE
Sbjct: 195 QEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLTKAVANQTSATFLRVVGSE 254
Query: 281 LVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMD 340
L+QK++G+G ++VRELF +A EHAPSI+F+D
Sbjct: 255 LIQKYLGDGPKLVRELFRVAE-----------------------------EHAPSIVFID 285
Query: 341 EIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
EID+IG+ R +S SGG+ E+QRT+LELLNQLDGF++
Sbjct: 286 EIDAIGTKRYDSNSGGEREIQRTLLELLNQLDGFDS 321
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 38/45 (84%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLL +AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 230 TGKTLLTKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 274
>gi|384248894|gb|EIE22377.1| 26S proteasome regulatory subunit [Coccomyxa subellipsoidea C-169]
Length = 398
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 118/288 (40%), Positives = 167/288 (57%), Gaps = 43/288 (14%)
Query: 102 QNLRRLQAQRNELNAKVRMLRE--------------ELQLLQEQGSYVGEVVKPMDKKKV 147
Q R+ Q E++AKVR LRE +L+ LQ G + EV++ +D+++
Sbjct: 12 QEYRKKLLQHKEIDAKVRTLREQVKAAKKDYDKTEDDLKALQSVGQIIAEVLRQLDEERF 71
Query: 148 LVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPD 207
+VK ++VV +D +T RVAL + T+ + LP +VDP+V M+ E
Sbjct: 72 IVKASSGPRYVVGCRSKVDKAKLTAGTRVALDMTTLTIMRYLPREVDPVVYNMLQEDPGK 131
Query: 208 STYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAH 267
Y M+GGL QI+E++E IELP+ +PELF +GI PKGVLLYGPPGTGKTLLARA+A
Sbjct: 132 VDYSMIGGLSEQIRELRESIELPLMNPELFQRVGIKPPKGVLLYGPPGTGKTLLARAIAS 191
Query: 268 HTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVC 327
+ + F++V S +V K+IGE +R++RE+F A
Sbjct: 192 NIDANFLKVVSSAIVDKYIGESARLIREMFGYA--------------------------- 224
Query: 328 NFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
+EH P IIFMDEID+IG R G+ D E+QRT++ELL+QLDGF+
Sbjct: 225 --KEHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLSQLDGFD 270
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 35/46 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARA+A + + F++V S +V K+IGE +R++RE+F A+
Sbjct: 180 TGKTLLARAIASNIDANFLKVVSSAIVDKYIGESARLIREMFGYAK 225
>gi|326437775|gb|EGD83345.1| 26S proteasome regulatory complex ATPase RPT4 [Salpingoeca sp. ATCC
50818]
Length = 391
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 118/285 (41%), Positives = 168/285 (58%), Gaps = 43/285 (15%)
Query: 105 RRLQAQRNELNAKVRMLREE--------------LQLLQEQGSYVGEVVKPMDKKKVLVK 150
RR +R EL+A+ R +E+ ++ LQ G +GEV+K +D++K +VK
Sbjct: 15 RRHLLERQELDARYRACQEKHQELLKQYDESEEAIKTLQSVGQIIGEVLKQLDEEKFIVK 74
Query: 151 VHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTY 210
++VV + +D + + RV L + T+ +ILP +VDPLV M E + Y
Sbjct: 75 ASSGPRYVVACRRGLDRSKLKQGTRVTLDMTTLTIMRILPREVDPLVYNMTAEDPGNVQY 134
Query: 211 EMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTE 270
+GGL Q++E++EVIELP+K+PELF +G+ PKG LLYGPPGTGKTLLARAVA + E
Sbjct: 135 NSIGGLSKQVRELREVIELPLKNPELFLRVGVNPPKGCLLYGPPGTGKTLLARAVASNVE 194
Query: 271 CTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFR 330
+F++V S +V K+IGE +RM+RE+F A R
Sbjct: 195 ASFLKVVSSAIVDKYIGESARMIREMFGYA-----------------------------R 225
Query: 331 EHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
+H P IIFMDEID+IG R G+ D E+QRT++ELL+QLDGF+
Sbjct: 226 DHEPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLHQLDGFD 270
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 36/46 (78%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA + E +F++V S +V K+IGE +RM+RE+F AR
Sbjct: 180 TGKTLLARAVASNVEASFLKVVSSAIVDKYIGESARMIREMFGYAR 225
>gi|168029577|ref|XP_001767302.1| 26S proteasome regulatory complex, ATPase RPT4 [Physcomitrella
patens subsp. patens]
gi|162681557|gb|EDQ67983.1| 26S proteasome regulatory complex, ATPase RPT4 [Physcomitrella
patens subsp. patens]
Length = 392
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 118/285 (41%), Positives = 168/285 (58%), Gaps = 43/285 (15%)
Query: 105 RRLQAQRNELNAKVRMLRE--------------ELQLLQEQGSYVGEVVKPMDKKKVLVK 150
RR Q EL+A++R LRE +L+ LQ G +GEV++ +D ++++VK
Sbjct: 12 RRKLLQHKELDARLRNLRENVKAARKEFDKTEDDLKALQSVGQIIGEVLRQLDSERLIVK 71
Query: 151 VHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTY 210
++VV +D + RVAL + T+ + LP +VDP+V M+ E + +Y
Sbjct: 72 ASSGPRYVVGCRNKVDKEKLMAGTRVALDMTTLTIMRALPREVDPVVYNMLHEDPGNISY 131
Query: 211 EMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTE 270
VGGL +QI+E++E IELP+ +PELF +GI PKGVLLYGPPGTGKTLLARA+A + +
Sbjct: 132 SAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNID 191
Query: 271 CTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFR 330
F++V S +V K+IGE +R++RE+F A R
Sbjct: 192 ANFLKVVSSAIVDKYIGESARLIREMFSYA-----------------------------R 222
Query: 331 EHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
+H P IIFMDEID+IG R G+ D E+QRT++ELLNQLDGF+
Sbjct: 223 DHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFD 267
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 35/46 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARA+A + + F++V S +V K+IGE +R++RE+F AR
Sbjct: 177 TGKTLLARAIASNIDANFLKVVSSAIVDKYIGESARLIREMFSYAR 222
>gi|440792774|gb|ELR13982.1| 26S proteasome AAAATPase subunit RPT2a, putative [Acanthamoeba
castellanii str. Neff]
Length = 445
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 122/288 (42%), Positives = 181/288 (62%), Gaps = 33/288 (11%)
Query: 89 KIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVL 148
+I++ L+ E QN L+ Q K + R ++ L+ VG + + +D+ +
Sbjct: 72 RIKDWLLMEEEFVQNQEVLKPQEE----KAQEERTKVDELRGSPMGVGTLEERIDENHAI 127
Query: 149 VKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDS 208
V ++ V I +D + + P C V L N++ ++ IL ++VDPLVS+M V+K P
Sbjct: 128 VGSSVGPEYYVTIMSFVDKDLLEPGCSVLLHNKALSVVGILSDEVDPLVSVMKVDKAPLE 187
Query: 209 TYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH 268
+Y +GGL++QI+EIKE +ELP+ HPEL++ +GI PKGV+LYG PGTGKTLLA+AVA+
Sbjct: 188 SYADIGGLESQIQEIKEAVELPLTHPELYEEIGINPPKGVILYGEPGTGKTLLAKAVANS 247
Query: 269 TECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCN 328
T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 248 TSATFLRVVGSELIQKYLGDGPKLVRELFRVAE--------------------------- 280
Query: 329 FREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
EH+PSI+F+DEID+IG+ R ++ SGG+ E+QRTMLELLNQLDGF++
Sbjct: 281 --EHSPSIVFIDEIDAIGTKRYDATSGGEREIQRTMLELLNQLDGFDS 326
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 235 TGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 279
>gi|359474942|ref|XP_003631557.1| PREDICTED: 26S protease regulatory subunit S10B homolog B isoform 2
[Vitis vinifera]
Length = 335
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 116/287 (40%), Positives = 169/287 (58%), Gaps = 43/287 (14%)
Query: 103 NLRRLQAQRNELNAKVRMLRE--------------ELQLLQEQGSYVGEVVKPMDKKKVL 148
+ R+ Q EL ++VR +RE +L+ LQ G +GEV++P+D ++++
Sbjct: 17 DYRKKLLQHKELESRVRSVRENLRAAKKEYAKTEDDLKSLQSVGQIIGEVLRPLDNERLI 76
Query: 149 VKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDS 208
VK ++VV +D +T RV L + T+ + LP +VDP+V M+ E +
Sbjct: 77 VKASSGPRYVVGCRSKVDKEKLTAGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNV 136
Query: 209 TYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH 268
+Y VGGL +QI+E++E IELP+ +PELF +GI PKGVLLYGPPGTGKTLLARA+A +
Sbjct: 137 SYAAVGGLSDQIRELRESIELPLMNPELFIRVGIKPPKGVLLYGPPGTGKTLLARAIASN 196
Query: 269 TECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCN 328
+ F++V S ++ K+IGE +R++RE+F A
Sbjct: 197 IDANFLKVVSSAIIDKYIGESARLIREMFGYA---------------------------- 228
Query: 329 FREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
R+H P IIFMDEID+IG R G+ D E+QRT++ELLNQLDGF+
Sbjct: 229 -RDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFD 274
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 35/46 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARA+A + + F++V S ++ K+IGE +R++RE+F AR
Sbjct: 184 TGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYAR 229
>gi|356564312|ref|XP_003550399.1| PREDICTED: proteasome-activating nucleotidase-like [Glycine max]
Length = 833
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 115/280 (41%), Positives = 166/280 (59%), Gaps = 43/280 (15%)
Query: 110 QRNELNAKVRMLRE--------------ELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEG 155
Q EL ++VR +RE +L+ LQ G +GEV++P+D ++++VK
Sbjct: 458 QHKELESRVRSVRENLRASKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGP 517
Query: 156 KFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGG 215
++VV +D +T RV L + T+ + LP +VDP+V M+ E + +Y VGG
Sbjct: 518 RYVVGCRSKVDKEKLTAGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNISYSAVGG 577
Query: 216 LDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIR 275
L +QI+E++E IELP+ +PELF +GI PKGVLLYGPPGTGKTLLARA+A + + F++
Sbjct: 578 LSDQIRELRESIELPLMNPELFIRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLK 637
Query: 276 VSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPS 335
V S ++ K+IGE +R++RE+F A R+H P
Sbjct: 638 VVSSAIIDKYIGESARLIREMFGYA-----------------------------RDHQPC 668
Query: 336 IIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
IIFMDEID+IG R G+ D E+QRT++ELLNQLDGF+
Sbjct: 669 IIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFD 708
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 35/46 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARA+A + + F++V S ++ K+IGE +R++RE+F AR
Sbjct: 618 TGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYAR 663
>gi|255538750|ref|XP_002510440.1| 26S protease regulatory subunit S10b, putative [Ricinus communis]
gi|223551141|gb|EEF52627.1| 26S protease regulatory subunit S10b, putative [Ricinus communis]
Length = 399
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 115/280 (41%), Positives = 167/280 (59%), Gaps = 43/280 (15%)
Query: 110 QRNELNAKVRMLRE--------------ELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEG 155
Q EL ++VR++RE +L+ LQ G +GEV++P+D ++++VK
Sbjct: 24 QHKELESRVRVVRESLRSAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGP 83
Query: 156 KFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGG 215
++VV +D +T RV L + T+ + LP +VDP+V M+ E + +Y VGG
Sbjct: 84 RYVVGCRSKVDKEKLTAGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGG 143
Query: 216 LDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIR 275
L +QI+E++E IELP+ +PELF +GI PKGVLLYGPPGTGKTLLARA+A + + F++
Sbjct: 144 LSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLK 203
Query: 276 VSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPS 335
V S ++ K+IGE +R++RE+F A R+H P
Sbjct: 204 VVSSAIIDKYIGESARLIREMFGYA-----------------------------RDHQPC 234
Query: 336 IIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
IIFMDEID+IG R G+ D E+QRT++ELLNQLDGF+
Sbjct: 235 IIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFD 274
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 35/46 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARA+A + + F++V S ++ K+IGE +R++RE+F AR
Sbjct: 184 TGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYAR 229
>gi|225703928|gb|ACO07810.1| 26S protease regulatory subunit 4 [Oncorhynchus mykiss]
Length = 440
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 118/276 (42%), Positives = 166/276 (60%), Gaps = 29/276 (10%)
Query: 101 EQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVD 160
E+ R Q Q L K R ++ L+ VG + + +D +V + V
Sbjct: 75 EEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGNLEEIIDDNHAIVSTSVGSEHCVS 134
Query: 161 IDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQI 220
I +D + + P C V L ++ + + +L + DPLV++M VEK P TY +GGLD QI
Sbjct: 135 ILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDQQI 194
Query: 221 KEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSE 280
+EIKE +ELP+ HPE ++ +GI PKGV+LYG PGTGKTLLA+AVA+ T TF+R GSE
Sbjct: 195 QEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRAVGSE 254
Query: 281 LVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMD 340
L+QK++G+G ++VRELF +A EHAPSI+F+D
Sbjct: 255 LIQKYLGDGPKLVRELFRVAE-----------------------------EHAPSIVFID 285
Query: 341 EIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
EID+IG+ R +S SGG+ E+QRT+LELLNQLDGF++
Sbjct: 286 EIDAIGTKRYDSNSGGEREIQRTLLELLNQLDGFDS 321
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 38/45 (84%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+R GSEL+QK++G+G ++VRELF +A
Sbjct: 230 TGKTLLAKAVANQTSATFLRAVGSELIQKYLGDGPKLVRELFRVA 274
>gi|126274173|ref|XP_001387450.1| protease subunit component [Scheffersomyces stipitis CBS 6054]
gi|126213320|gb|EAZ63427.1| protease subunit component [Scheffersomyces stipitis CBS 6054]
Length = 446
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 114/243 (46%), Positives = 152/243 (62%), Gaps = 29/243 (11%)
Query: 133 SYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNK 192
+ G + +K K ++ + KFVV + + + D+ RV + + Y + LP +
Sbjct: 110 AQAGAIQNADNKSKYVINIKQIAKFVVGLGERVSPTDIEEGMRVGVDRQKYEIQLPLPPR 169
Query: 193 VDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYG 252
+DP V++M VE+ PD TY VGG QI++++EV+ELP+ PE F LGI PKG+LLYG
Sbjct: 170 IDPSVTMMTVEEKPDVTYSDVGGCKEQIEKLREVVELPLLSPERFVKLGIDPPKGILLYG 229
Query: 253 PPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPL 312
PPGTGKTL ARAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 230 PPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKK-------- 281
Query: 313 LFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLD 372
C IIF DE+D+IG +R + G+GGD+EVQRTMLEL+ QLD
Sbjct: 282 -------------AC--------IIFFDEVDAIGGARFDDGAGGDNEVQRTMLELITQLD 320
Query: 373 GFE 375
GF+
Sbjct: 321 GFD 323
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 233 TGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTK 280
>gi|321476819|gb|EFX87779.1| hypothetical protein DAPPUDRAFT_306388 [Daphnia pulex]
Length = 442
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 121/290 (41%), Positives = 176/290 (60%), Gaps = 37/290 (12%)
Query: 89 KIEELQLIVAEKEQNLRRL--QAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKK 146
+I++ L+ E +N RL Q +RNE R ++ L+ VG + + +D
Sbjct: 69 RIKDYLLMEEEFIRNQERLKPQEERNEEE------RSKVDDLRGTPMSVGTLEEIIDDTH 122
Query: 147 VLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVP 206
+V + V I +D + + P C V L ++ + + +L + DP+V++M +EK P
Sbjct: 123 AIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAIVGVLSDDTDPMVTVMKLEKAP 182
Query: 207 DSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVA 266
TY +GGLD QI+EIKE +ELP+ HPE ++ +GI PKGV+LYG PGTGKTLLA+AVA
Sbjct: 183 QETYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVA 242
Query: 267 HHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIV 326
+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 243 NQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAE------------------------- 277
Query: 327 CNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
EH+PSI+F+DEID+IG+ R +S SGG+ E+QRTMLELLNQLDGF++
Sbjct: 278 ----EHSPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDS 323
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 232 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 276
>gi|367020878|ref|XP_003659724.1| hypothetical protein MYCTH_2076503 [Myceliophthora thermophila ATCC
42464]
gi|347006991|gb|AEO54479.1| hypothetical protein MYCTH_2076503 [Myceliophthora thermophila ATCC
42464]
Length = 391
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 117/277 (42%), Positives = 165/277 (59%), Gaps = 29/277 (10%)
Query: 99 EKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFV 158
E E L+ L+ + L + E ++ LQ G +GEV+K +D ++ +VK ++V
Sbjct: 23 EWETKLKNLRMEIKSLQKEYEQTEENIKALQSVGQIIGEVLKQLDDERFIVKASSGPRYV 82
Query: 159 VDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDN 218
V +D + + RVAL + T+ ++LP +VDPLV M +E ++ +GGL+
Sbjct: 83 VGCRSKVDKSKLKQGTRVALDMTTLTIMRMLPREVDPLVYNMSLEDPGQVSFAGIGGLNE 142
Query: 219 QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSG 278
QI+E++EVIELP+K+PELF +GI PKGVLLYGPPGTGKTLLARAVA E F++V
Sbjct: 143 QIRELREVIELPLKNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAVASSLETNFLKVVS 202
Query: 279 SELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIF 338
S +V K+IGE +R++RE+F A +EH P IIF
Sbjct: 203 SAIVDKYIGESARLIREMFGYA-----------------------------KEHEPCIIF 233
Query: 339 MDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
MDEID+IG R G+ D E+QRT++ELLNQLDGF+
Sbjct: 234 MDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFD 270
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 34/46 (73%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA E F++V S +V K+IGE +R++RE+F A+
Sbjct: 180 TGKTLLARAVASSLETNFLKVVSSAIVDKYIGESARLIREMFGYAK 225
>gi|344304859|gb|EGW35091.1| protease subunit component [Spathaspora passalidarum NRRL Y-27907]
Length = 448
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 114/232 (49%), Positives = 148/232 (63%), Gaps = 29/232 (12%)
Query: 144 KKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVE 203
K K ++ + KFVV + + + D+ RV + + Y + LP ++DP V++M VE
Sbjct: 123 KSKYVINIKQIAKFVVGLGERVSPTDIEEGMRVGVDRQKYEIQLPLPPRIDPTVTMMTVE 182
Query: 204 KVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLAR 263
+ PD TY VGG +QI++++EV+ELP+ PE F LGI PKG+LLYGPPGTGKTL AR
Sbjct: 183 EKPDVTYSDVGGCKDQIEKLREVVELPLLSPERFVKLGIDPPKGILLYGPPGTGKTLCAR 242
Query: 264 AVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTN 323
AVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 243 AVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKK------------------- 283
Query: 324 TIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C IIF DEID+IG R + G+GGD+EVQRTMLEL+ QLDGF+
Sbjct: 284 --AC--------IIFFDEIDAIGGVRFDDGAGGDNEVQRTMLELITQLDGFD 325
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 235 TGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTK 282
>gi|14601782|ref|NP_148323.1| proteasome-activating nucleotidase [Aeropyrum pernix K1]
gi|20532220|sp|Q9YAC7.1|PAN_AERPE RecName: Full=Proteasome-activating nucleotidase; Short=PAN;
AltName: Full=Proteasomal ATPase; AltName:
Full=Proteasome regulatory ATPase; AltName:
Full=Proteasome regulatory particle
gi|5105710|dbj|BAA81022.1| proteasome-activating nucleotidase [Aeropyrum pernix K1]
Length = 409
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 125/276 (45%), Positives = 164/276 (59%), Gaps = 43/276 (15%)
Query: 114 LNAKVRML-REELQLLQEQGSYVGEVVKPM-------------DKKKVLVKVHPEGKFVV 159
L KVR L +E++ L +E Y E+ K + D +V+VK +V
Sbjct: 28 LKDKVRSLTKEKISLQKELEYYKNEITKLLSPPYIEAVVLEVIDDNRVVVKSSTGPNLIV 87
Query: 160 DIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQ 219
++ +D + P VAL N T+ +LP + DPLV M VE+ P ++ VGGL+ Q
Sbjct: 88 NVAAGVDARSLKPGAIVALNNRGSTIVDVLPGRYDPLVKAMEVEERPKVFFKDVGGLEEQ 147
Query: 220 IKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGS 279
I+EI E + LP+K+P LF LGI PKGVLL+GPPGTGKTLLA+AVA TE TFIRV GS
Sbjct: 148 IREIYEAVVLPIKNPHLFRELGIDPPKGVLLHGPPGTGKTLLAKAVAGETEATFIRVVGS 207
Query: 280 ELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFM 339
ELV KFIGEG+R+VRE+F +A RE APSI+F+
Sbjct: 208 ELVNKFIGEGARLVREIFRLA-----------------------------REKAPSILFI 238
Query: 340 DEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
DEID+I S R++ G+ GD EVQRTML+LL +LDGF+
Sbjct: 239 DEIDAIASKRVDIGTSGDREVQRTMLQLLAELDGFD 274
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/51 (70%), Positives = 42/51 (82%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
+GKTLLA+AVA TE TFIRV GSELV KFIGEG+R+VRE+F +AR K S
Sbjct: 184 TGKTLLAKAVAGETEATFIRVVGSELVNKFIGEGARLVREIFRLAREKAPS 234
>gi|115389152|ref|XP_001212081.1| 26S protease regulatory subunit S10B [Aspergillus terreus NIH2624]
gi|114194477|gb|EAU36177.1| 26S protease regulatory subunit S10B [Aspergillus terreus NIH2624]
Length = 393
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 117/277 (42%), Positives = 166/277 (59%), Gaps = 29/277 (10%)
Query: 99 EKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFV 158
E E L+ L+ +L + + E ++ LQ G +GEV+K +D+++ +VK ++V
Sbjct: 25 EWEAKLKSLRLGIKDLQREFDISEENIKALQSVGQIIGEVLKQLDEERFIVKASSGPRYV 84
Query: 159 VDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDN 218
V +D + + RVAL + T+ ++LP +VDPLV M +E + +GGL+
Sbjct: 85 VGCRSKVDKSKLKQGTRVALDMTTLTIMRMLPREVDPLVYNMSLEDPGQVNFAGIGGLNE 144
Query: 219 QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSG 278
QI+E++EVIELP+K+PELF +GI PKGVLLYGPPGTGKTLLARAVA E F++V
Sbjct: 145 QIRELREVIELPLKNPELFQRVGIKPPKGVLLYGPPGTGKTLLARAVASSMETNFLKVVS 204
Query: 279 SELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIF 338
S +V K+IGE +R++RE+F A +EH P IIF
Sbjct: 205 SAIVDKYIGESARLIREMFGYA-----------------------------KEHEPCIIF 235
Query: 339 MDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
MDEID+IG R G+ D E+QRT++ELLNQLDGF+
Sbjct: 236 MDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFD 272
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 34/46 (73%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA E F++V S +V K+IGE +R++RE+F A+
Sbjct: 182 TGKTLLARAVASSMETNFLKVVSSAIVDKYIGESARLIREMFGYAK 227
>gi|307207117|gb|EFN84926.1| 26S protease regulatory subunit S10B [Harpegnathos saltator]
Length = 393
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 117/278 (42%), Positives = 163/278 (58%), Gaps = 29/278 (10%)
Query: 99 EKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFV 158
E E L+ ++ +L + +L+ LQ G VGEV+K + ++K +VK ++V
Sbjct: 25 EVESRLKEMREHLKDLTKQYDKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYV 84
Query: 159 VDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDN 218
V + +D N + RVAL + T+ + LP +VDPLV M E D TY +GGL
Sbjct: 85 VGCRRQLDKNKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDVTYSAIGGLSE 144
Query: 219 QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSG 278
QI+E++EVIELP+ +PELF +GI PKG LLYGPPGTGKTLLARAVA + F++V
Sbjct: 145 QIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVS 204
Query: 279 SELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIF 338
S +V K+IGE +R++RE+F A R+H P IIF
Sbjct: 205 SAIVDKYIGESARLIREMFNYA-----------------------------RDHQPCIIF 235
Query: 339 MDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
MDEID+IG R G+ D E+QRT++ELLNQ+DGF++
Sbjct: 236 MDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDS 273
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 34/46 (73%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA + F++V S +V K+IGE +R++RE+F AR
Sbjct: 182 TGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYAR 227
>gi|449543056|gb|EMD34033.1| hypothetical protein CERSUDRAFT_117543 [Ceriporiopsis subvermispora
B]
Length = 447
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 121/278 (43%), Positives = 175/278 (62%), Gaps = 38/278 (13%)
Query: 103 NLRRL--QAQRNELNAKVRMLREELQLLQEQGS--YVGEVVKPMDKKKVLVKVHPEGKFV 158
N RL +A R E N + R ++L+ GS VG + + +D +V +F
Sbjct: 85 NQERLKPEATREEKNEEDRSRVDDLR-----GSPMAVGTLEEIIDDDHAIVSTASGPEFY 139
Query: 159 VDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDN 218
V I +D + + P+C+V L +++ + +L + DP+VS+M ++K P +Y +GGL+
Sbjct: 140 VSIMSFVDKDLLEPSCQVLLHHKTQAVIGVLQDDTDPMVSVMKLDKAPTESYADIGGLEQ 199
Query: 219 QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSG 278
QI+EIKE +ELP+ HPEL++ +GI PKGV+LYG PGTGKTLLA+AVA+ T TF+RV G
Sbjct: 200 QIQEIKESVELPLTHPELYEEMGIKPPKGVILYGVPGTGKTLLAKAVANQTSATFLRVVG 259
Query: 279 SELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIF 338
SEL+QK++G+G ++VRELF +A EHAPSI+F
Sbjct: 260 SELIQKYLGDGPKLVRELFRVAE-----------------------------EHAPSIVF 290
Query: 339 MDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
+DEID+IG+ R +S SGG+ E+QRTMLELLNQLDGF++
Sbjct: 291 IDEIDAIGTKRYDSTSGGEREIQRTMLELLNQLDGFDS 328
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 237 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 281
>gi|328773002|gb|EGF83039.1| hypothetical protein BATDEDRAFT_33940 [Batrachochytrium
dendrobatidis JAM81]
Length = 402
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 121/285 (42%), Positives = 166/285 (58%), Gaps = 43/285 (15%)
Query: 105 RRLQAQRNELNAKVRMLR--------------EELQLLQEQGSYVGEVVKPMDKKKVLVK 150
R+ + E AKV+ LR ++++ LQ G +GEV+K +D +K +VK
Sbjct: 26 RKRLLEHREFEAKVKELRLGLRVFEKSLDKSEDDIKALQSVGQIIGEVLKQLDHEKFIVK 85
Query: 151 VHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTY 210
++VV + + + + RVAL + T+ +ILP +VDPLV M E D T+
Sbjct: 86 ASSGPRYVVGCREKVQKDKLKQGVRVALDMTTLTIMRILPREVDPLVYNMSAEDPGDVTF 145
Query: 211 EMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTE 270
VGGL QI+E++EVIELP+ +PELF +GI PKGVLLYGPPGTGKTLLARAVA E
Sbjct: 146 AGVGGLGEQIRELREVIELPLLNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAVAATLE 205
Query: 271 CTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFR 330
C F++V S +V K+IGE +R++RE+F A +
Sbjct: 206 CNFLKVVSSAIVDKYIGESARLIREMFGYA-----------------------------K 236
Query: 331 EHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
EH P IIFMDEID+IG R G+ D E+QRT++ELLNQ+DGF+
Sbjct: 237 EHEPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFD 281
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 35/46 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA EC F++V S +V K+IGE +R++RE+F A+
Sbjct: 191 TGKTLLARAVAATLECNFLKVVSSAIVDKYIGESARLIREMFGYAK 236
>gi|212537565|ref|XP_002148938.1| proteasome regulatory particle subunit Rpt4, putative [Talaromyces
marneffei ATCC 18224]
gi|210068680|gb|EEA22771.1| proteasome regulatory particle subunit Rpt4, putative [Talaromyces
marneffei ATCC 18224]
Length = 393
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 118/281 (41%), Positives = 168/281 (59%), Gaps = 29/281 (10%)
Query: 95 LIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPE 154
L + E E L+ L+ + E + + E ++ LQ G +GEV+K +D+++ +VK
Sbjct: 21 LDLREWEAKLKSLRMEIKESQKEYDITEENIKALQSVGQIIGEVLKQLDEERFIVKASSG 80
Query: 155 GKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVG 214
++VV +D + RVAL + T+ ++LP +VDPLV M +E + +G
Sbjct: 81 PRYVVGCRSKVDKAKLKQGTRVALDMTTLTIMRMLPREVDPLVYNMSLEDPGQVNFAGIG 140
Query: 215 GLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFI 274
GL++QI+E++EVIELP+K+PELF +GI PKGVLLYGPPGTGKTLLARAVA E F+
Sbjct: 141 GLNDQIRELREVIELPLKNPELFMRVGIKPPKGVLLYGPPGTGKTLLARAVASSLETNFL 200
Query: 275 RVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAP 334
+V S +V K+IGE +R++RE+F A +EH P
Sbjct: 201 KVVSSAIVDKYIGESARLIREMFGYA-----------------------------KEHEP 231
Query: 335 SIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
IIFMDEID+IG R G+ D E+QRT++ELLNQLDGF+
Sbjct: 232 CIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFD 272
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 34/46 (73%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA E F++V S +V K+IGE +R++RE+F A+
Sbjct: 182 TGKTLLARAVASSLETNFLKVVSSAIVDKYIGESARLIREMFGYAK 227
>gi|238488034|ref|XP_002375255.1| proteasome regulatory particle subunit Rpt4, putative [Aspergillus
flavus NRRL3357]
gi|220700134|gb|EED56473.1| proteasome regulatory particle subunit Rpt4, putative [Aspergillus
flavus NRRL3357]
Length = 413
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 117/277 (42%), Positives = 166/277 (59%), Gaps = 29/277 (10%)
Query: 99 EKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFV 158
E E L+ L+ +L + + E ++ LQ G +GEV+K +D+++ +VK ++V
Sbjct: 25 EWEAKLKSLRMGIKDLQREFDISEENIKALQSVGQIIGEVLKQLDEERFIVKASSGPRYV 84
Query: 159 VDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDN 218
V +D + + RVAL + T+ ++LP +VDPLV M +E + +GGL+
Sbjct: 85 VGCRSKVDKSKLKQGTRVALDMTTLTIMRMLPREVDPLVYNMSLEDPGQVNFAGIGGLNE 144
Query: 219 QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSG 278
QI+E++EVIELP+K+PELF +GI PKGVLLYGPPGTGKTLLARAVA E F++V
Sbjct: 145 QIRELREVIELPLKNPELFHRVGIKPPKGVLLYGPPGTGKTLLARAVASSMETNFLKVVS 204
Query: 279 SELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIF 338
S +V K+IGE +R++RE+F A +EH P IIF
Sbjct: 205 SAIVDKYIGESARLIREMFGYA-----------------------------KEHEPCIIF 235
Query: 339 MDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
MDEID+IG R G+ D E+QRT++ELLNQLDGF+
Sbjct: 236 MDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFD 272
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 34/46 (73%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA E F++V S +V K+IGE +R++RE+F A+
Sbjct: 182 TGKTLLARAVASSMETNFLKVVSSAIVDKYIGESARLIREMFGYAK 227
>gi|156085064|ref|XP_001610015.1| 26s proteasome aaa-ATPase subunit Rpt3 [Babesia bovis T2Bo]
gi|154797267|gb|EDO06447.1| 26s proteasome aaa-ATPase subunit Rpt3, putative [Babesia bovis]
Length = 399
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 125/319 (39%), Positives = 187/319 (58%), Gaps = 44/319 (13%)
Query: 61 SSRGTEFFTMDVDEAIKSSEGFKPYYVTKIEEL--QLIVAEKEQNLRRLQAQRNELNAKV 118
S+ GT++ IK S + Y TK+++L QL + E ++N R + + N K+
Sbjct: 2 SNMGTKYL------PIKMSSTQEDLY-TKLKQLEKQLDLCETQENYVREEYK----NLKL 50
Query: 119 RMLR--EELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRV 176
M+R EE++ +Q +G+ + +DK +V + V I I+ + PN V
Sbjct: 51 EMIRAREEIKRIQSVPLVIGQFLDMVDKNHAIVSSTAGSNYYVRILSTINREQLVPNTSV 110
Query: 177 ALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPEL 236
AL S+++ +LP + D + +M + PD +Y +GGLD Q +E++E +ELP+ PEL
Sbjct: 111 ALHRHSHSIVDLLPPEADSSIQMMQISDRPDVSYADIGGLDAQKQEVREAVELPLTCPEL 170
Query: 237 FDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVREL 296
+ +GI P GVLLYGPPGTGKT+LA+AVAHHT +FIRV GSE VQK++GEG RMVR++
Sbjct: 171 YHQIGIDPPVGVLLYGPPGTGKTMLAKAVAHHTGASFIRVVGSEFVQKYLGEGPRMVRDI 230
Query: 297 FVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGG 356
F +A RE+AP+I+F+DE+DSI + R ++ +G
Sbjct: 231 FRLA-----------------------------RENAPAILFIDEVDSIATKRFDAQTGA 261
Query: 357 DSEVQRTMLELLNQLDGFE 375
D EVQR +LELLNQ+DGF+
Sbjct: 262 DREVQRILLELLNQMDGFD 280
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/46 (67%), Positives = 40/46 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKT+LA+AVAHHT +FIRV GSE VQK++GEG RMVR++F +AR
Sbjct: 190 TGKTMLAKAVAHHTGASFIRVVGSEFVQKYLGEGPRMVRDIFRLAR 235
>gi|303313818|ref|XP_003066918.1| 26S proteasome regulatory ATPase subunit, putative [Coccidioides
posadasii C735 delta SOWgp]
gi|240106585|gb|EER24773.1| 26S proteasome regulatory ATPase subunit, putative [Coccidioides
posadasii C735 delta SOWgp]
gi|320032629|gb|EFW14581.1| 26S protease regulatory subunit S10B [Coccidioides posadasii str.
Silveira]
Length = 393
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 117/277 (42%), Positives = 166/277 (59%), Gaps = 29/277 (10%)
Query: 99 EKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFV 158
E E L+ L+ +L + E ++ LQ G +GEV+K +D+++ +VK ++V
Sbjct: 25 EWEAKLKALRLGIKDLQKEFDQTEENIKALQSVGQIIGEVLKQLDEERFIVKASSGPRYV 84
Query: 159 VDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDN 218
V +D + + RVAL + T+ ++LP +VDPLV M +E + +GGL++
Sbjct: 85 VGCRSKVDKSKLKQGTRVALDMTTLTIMRMLPREVDPLVYNMSLEDPGQVNFAGIGGLND 144
Query: 219 QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSG 278
QI+E++EVIELP+K+PELF +GI PKGVLLYGPPGTGKTLLARAVA E F++V
Sbjct: 145 QIRELREVIELPLKNPELFMRVGIKPPKGVLLYGPPGTGKTLLARAVASSLETNFLKVVS 204
Query: 279 SELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIF 338
S +V K+IGE +R++RE+F A +EH P IIF
Sbjct: 205 SAIVDKYIGESARLIREMFGYA-----------------------------KEHEPCIIF 235
Query: 339 MDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
MDEID+IG R G+ D E+QRT++ELLNQLDGF+
Sbjct: 236 MDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFD 272
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 34/46 (73%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA E F++V S +V K+IGE +R++RE+F A+
Sbjct: 182 TGKTLLARAVASSLETNFLKVVSSAIVDKYIGESARLIREMFGYAK 227
>gi|15669365|ref|NP_248170.1| proteasome-activating nucleotidase [Methanocaldococcus jannaschii
DSM 2661]
gi|2492524|sp|Q58576.1|PAN_METJA RecName: Full=Proteasome-activating nucleotidase; Short=PAN;
AltName: Full=Proteasomal ATPase; AltName:
Full=Proteasome regulatory ATPase; AltName:
Full=Proteasome regulatory particle
gi|1591803|gb|AAB99179.1| proteasome regulatory AAA-ATPase [Methanocaldococcus jannaschii DSM
2661]
Length = 430
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 114/257 (44%), Positives = 166/257 (64%), Gaps = 29/257 (11%)
Query: 120 MLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALR 179
+LR EL ++ VG VV + ++KV+VK F+V++ ++ +D+ P RV L
Sbjct: 79 ILRRELDRMRVPPLIVGTVVDKVGERKVVVKSSTGPSFLVNVSHFVNPDDLAPGKRVCLN 138
Query: 180 NESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDA 239
++ T+ +LP D M V++ P+ YE +GGL+ Q++EI+EV+ELP+KHPELF+
Sbjct: 139 QQTLTVVDVLPENKDYRAKAMEVDERPNVRYEDIGGLEKQMQEIREVVELPLKHPELFEK 198
Query: 240 LGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVM 299
+GI PKG+LLYGPPGTGKTLLA+AVA T TFIRV GSELV+KFIGEG+ +V+++F +
Sbjct: 199 VGIEPPKGILLYGPPGTGKTLLAKAVATETNATFIRVVGSELVKKFIGEGASLVKDIFKL 258
Query: 300 ASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSE 359
A +E APSIIF+DEID+I + R ++ +GGD E
Sbjct: 259 A-----------------------------KEKAPSIIFIDEIDAIAAKRTDALTGGDRE 289
Query: 360 VQRTMLELLNQLDGFEA 376
VQRT+++LL ++DGF+A
Sbjct: 290 VQRTLMQLLAEMDGFDA 306
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 41/51 (80%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
+GKTLLA+AVA T TFIRV GSELV+KFIGEG+ +V+++F +A+ K S
Sbjct: 215 TGKTLLAKAVATETNATFIRVVGSELVKKFIGEGASLVKDIFKLAKEKAPS 265
>gi|242808792|ref|XP_002485237.1| proteasome regulatory particle subunit Rpt4, putative [Talaromyces
stipitatus ATCC 10500]
gi|218715862|gb|EED15284.1| proteasome regulatory particle subunit Rpt4, putative [Talaromyces
stipitatus ATCC 10500]
Length = 410
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 117/281 (41%), Positives = 169/281 (60%), Gaps = 29/281 (10%)
Query: 95 LIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPE 154
L + E E L+ L+ + + + + E ++ LQ G +GEV+K +D+++ +VK
Sbjct: 21 LDLREWEAKLKSLRMEIKDSQKEYDITEENIKALQSVGQIIGEVLKQLDEERFIVKASSG 80
Query: 155 GKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVG 214
++VV +D + + RVAL + T+ ++LP +VDPLV M +E + +G
Sbjct: 81 PRYVVGCRSKVDKSKLKQGTRVALDMTTLTIMRMLPREVDPLVYNMSLEDPGQVNFAGIG 140
Query: 215 GLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFI 274
GL++QI+E++EVIELP+K+PELF +GI PKGVLLYGPPGTGKTLLARAVA E F+
Sbjct: 141 GLNDQIRELREVIELPLKNPELFMRVGIKPPKGVLLYGPPGTGKTLLARAVASSLETNFL 200
Query: 275 RVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAP 334
+V S +V K+IGE +R++RE+F A +EH P
Sbjct: 201 KVVSSAIVDKYIGESARLIREMFGYA-----------------------------KEHEP 231
Query: 335 SIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
IIFMDEID+IG R G+ D E+QRT++ELLNQLDGF+
Sbjct: 232 CIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFD 272
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 34/46 (73%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA E F++V S +V K+IGE +R++RE+F A+
Sbjct: 182 TGKTLLARAVASSLETNFLKVVSSAIVDKYIGESARLIREMFGYAK 227
>gi|302507019|ref|XP_003015466.1| hypothetical protein ARB_06592 [Arthroderma benhamiae CBS 112371]
gi|302658797|ref|XP_003021098.1| hypothetical protein TRV_04811 [Trichophyton verrucosum HKI 0517]
gi|291179038|gb|EFE34826.1| hypothetical protein ARB_06592 [Arthroderma benhamiae CBS 112371]
gi|291184977|gb|EFE40480.1| hypothetical protein TRV_04811 [Trichophyton verrucosum HKI 0517]
gi|326472139|gb|EGD96148.1| proteasome-activating nucleotidase [Trichophyton tonsurans CBS
112818]
gi|326477000|gb|EGE01010.1| proteasome regulatory particle subunit Rpt1 [Trichophyton equinum
CBS 127.97]
Length = 439
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 116/237 (48%), Positives = 149/237 (62%), Gaps = 29/237 (12%)
Query: 140 KPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSL 199
K +K K ++ V KFVV++ + + D+ RV + Y + LP K+DP V++
Sbjct: 110 KDAEKSKYVINVKQIAKFVVNLGERVSPTDIEEGMRVGVDRNKYQILLPLPPKIDPSVTM 169
Query: 200 MMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKT 259
M VE PD TY VGG QI++++EV+E+P+ PE F LGI PKG LLYGPPGTGKT
Sbjct: 170 MTVEDKPDVTYGDVGGSKEQIEKLREVVEMPLLSPERFVGLGIDPPKGALLYGPPGTGKT 229
Query: 260 LLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLT 319
L ARAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 230 LCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKK--------------- 274
Query: 320 ILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
C IIF DEID+IG +R + G+GGD+EVQRTMLEL+ QLDGF++
Sbjct: 275 ------AC--------IIFFDEIDAIGGARFDDGAGGDNEVQRTMLELITQLDGFDS 317
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 226 TGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTK 273
>gi|395332518|gb|EJF64897.1| 26S proteasome subunit P45 [Dichomitus squalens LYAD-421 SS1]
Length = 449
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 123/291 (42%), Positives = 181/291 (62%), Gaps = 38/291 (13%)
Query: 89 KIEELQLIVAEKEQNLRRLQAQ--RNELNAKVRMLREELQLLQEQGS--YVGEVVKPMDK 144
+I++ L+ E QN RL+ + R E N + R ++L+ GS VG + + +D
Sbjct: 73 RIKDYLLMEEEFIQNQERLKPESAREEKNEEDRTKVDDLR-----GSPMAVGTLEEIIDD 127
Query: 145 KKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEK 204
++ +F V I +D + + P C+V L +++ + +L + DP+VS+M ++K
Sbjct: 128 DHAIISTASGPEFYVSIMTFVDKDLLEPGCQVLLHHKNQAVVGVLQDDADPMVSVMKLDK 187
Query: 205 VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 264
P +Y +GGL+ QI+EIKE +ELP+ HPEL++ +GI PKGV+LYG PGTGKTLLA+A
Sbjct: 188 APTESYADIGGLEQQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGVPGTGKTLLAKA 247
Query: 265 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNT 324
VA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 248 VANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAE----------------------- 284
Query: 325 IVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
EHAPSI+F+DEID+IG+ R +S SGG+ E+QRTMLELLNQLDGF+
Sbjct: 285 ------EHAPSIVFIDEIDAIGTKRYDSTSGGEREIQRTMLELLNQLDGFD 329
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 239 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 283
>gi|119185236|ref|XP_001243428.1| hypothetical protein CIMG_07324 [Coccidioides immitis RS]
gi|392866301|gb|EAS28928.2| 26S protease regulatory subunit 10B [Coccidioides immitis RS]
Length = 393
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 117/277 (42%), Positives = 166/277 (59%), Gaps = 29/277 (10%)
Query: 99 EKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFV 158
E E L+ L+ +L + E ++ LQ G +GEV+K +D+++ +VK ++V
Sbjct: 25 EWEAKLKALRLGIKDLQKEFDQTEENIKALQSVGQIIGEVLKQLDEERFIVKASSGPRYV 84
Query: 159 VDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDN 218
V +D + + RVAL + T+ ++LP +VDPLV M +E + +GGL++
Sbjct: 85 VGCRSKVDKSKLKQGTRVALDMTTLTIMRMLPREVDPLVYNMSLEDPGQVNFAGIGGLND 144
Query: 219 QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSG 278
QI+E++EVIELP+K+PELF +GI PKGVLLYGPPGTGKTLLARAVA E F++V
Sbjct: 145 QIRELREVIELPLKNPELFMRVGIKPPKGVLLYGPPGTGKTLLARAVASSLETNFLKVVS 204
Query: 279 SELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIF 338
S +V K+IGE +R++RE+F A +EH P IIF
Sbjct: 205 SAIVDKYIGESARLIREMFGYA-----------------------------KEHEPCIIF 235
Query: 339 MDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
MDEID+IG R G+ D E+QRT++ELLNQLDGF+
Sbjct: 236 MDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFD 272
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 34/46 (73%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA E F++V S +V K+IGE +R++RE+F A+
Sbjct: 182 TGKTLLARAVASSLETNFLKVVSSAIVDKYIGESARLIREMFGYAK 227
>gi|327305323|ref|XP_003237353.1| proteasome-activating nucleotidase [Trichophyton rubrum CBS 118892]
gi|326460351|gb|EGD85804.1| proteasome-activating nucleotidase [Trichophyton rubrum CBS 118892]
Length = 439
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 116/237 (48%), Positives = 149/237 (62%), Gaps = 29/237 (12%)
Query: 140 KPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSL 199
K +K K ++ V KFVV++ + + D+ RV + Y + LP K+DP V++
Sbjct: 110 KDAEKSKYVINVKQIAKFVVNLGERVSPTDIEEGMRVGVDRNKYQILLPLPPKIDPSVTM 169
Query: 200 MMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKT 259
M VE PD TY VGG QI++++EV+E+P+ PE F LGI PKG LLYGPPGTGKT
Sbjct: 170 MTVEDKPDVTYGDVGGSKEQIEKLREVVEMPLLSPERFVGLGIDPPKGALLYGPPGTGKT 229
Query: 260 LLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLT 319
L ARAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 230 LCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKK--------------- 274
Query: 320 ILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
C IIF DEID+IG +R + G+GGD+EVQRTMLEL+ QLDGF++
Sbjct: 275 ------AC--------IIFFDEIDAIGGARFDDGAGGDNEVQRTMLELITQLDGFDS 317
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 226 TGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTK 273
>gi|225428386|ref|XP_002283544.1| PREDICTED: 26S protease regulatory subunit S10B homolog B isoform 1
[Vitis vinifera]
gi|297744432|emb|CBI37694.3| unnamed protein product [Vitis vinifera]
Length = 399
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 116/287 (40%), Positives = 169/287 (58%), Gaps = 43/287 (14%)
Query: 103 NLRRLQAQRNELNAKVRMLRE--------------ELQLLQEQGSYVGEVVKPMDKKKVL 148
+ R+ Q EL ++VR +RE +L+ LQ G +GEV++P+D ++++
Sbjct: 17 DYRKKLLQHKELESRVRSVRENLRAAKKEYAKTEDDLKSLQSVGQIIGEVLRPLDNERLI 76
Query: 149 VKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDS 208
VK ++VV +D +T RV L + T+ + LP +VDP+V M+ E +
Sbjct: 77 VKASSGPRYVVGCRSKVDKEKLTAGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNV 136
Query: 209 TYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH 268
+Y VGGL +QI+E++E IELP+ +PELF +GI PKGVLLYGPPGTGKTLLARA+A +
Sbjct: 137 SYAAVGGLSDQIRELRESIELPLMNPELFIRVGIKPPKGVLLYGPPGTGKTLLARAIASN 196
Query: 269 TECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCN 328
+ F++V S ++ K+IGE +R++RE+F A
Sbjct: 197 IDANFLKVVSSAIIDKYIGESARLIREMFGYA---------------------------- 228
Query: 329 FREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
R+H P IIFMDEID+IG R G+ D E+QRT++ELLNQLDGF+
Sbjct: 229 -RDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFD 274
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 35/46 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARA+A + + F++V S ++ K+IGE +R++RE+F AR
Sbjct: 184 TGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYAR 229
>gi|256072775|ref|XP_002572709.1| 26S protease regulatory subunit [Schistosoma mansoni]
gi|353229076|emb|CCD75247.1| putative 26s protease regulatory subunit [Schistosoma mansoni]
Length = 433
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 115/230 (50%), Positives = 146/230 (63%), Gaps = 29/230 (12%)
Query: 146 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
K ++ V KFVVD+ + D+ RV + Y +H LP K+DP V++M VE
Sbjct: 110 KYIINVKQFAKFVVDLADTVAPTDIEEGMRVGVDRTKYQIHIPLPPKIDPSVTMMQVEDK 169
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
PD TY VGG QI++++EV+ELP+ HPE F LGI PKGVLL+GPPGTGKTL ARAV
Sbjct: 170 PDVTYSDVGGCKEQIEKLREVVELPLLHPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAV 229
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTI 325
A+ T+ FIRV GSELVQK++GEG+RMVRELF +A KK
Sbjct: 230 ANRTDACFIRVIGSELVQKYVGEGARMVRELFELARSKK--------------------- 268
Query: 326 VCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C IIF DEID++G +R + G GG++EVQRTMLEL+NQLDGF+
Sbjct: 269 AC--------IIFFDEIDAVGGARFDDGLGGENEVQRTMLELINQLDGFD 310
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF +AR K
Sbjct: 220 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFELARSK 267
>gi|71028288|ref|XP_763787.1| 26S proteasome regulatory subunit [Theileria parva strain Muguga]
gi|68350741|gb|EAN31504.1| 26S proteasome regulatory subunit, putative [Theileria parva]
Length = 415
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 121/296 (40%), Positives = 176/296 (59%), Gaps = 39/296 (13%)
Query: 86 YVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKK 145
YV K++E + + EQ L++L+A ELN K + ++L+ LQ G VG V++ +D
Sbjct: 32 YVRKVKEHR----DLEQKLKQLRADMVELNRKDAKIEDDLKALQSIGQIVGNVLRKIDDN 87
Query: 146 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMM---- 201
K +VK ++VV NID+N + RVAL + T+ K+LP +VDP++ M+
Sbjct: 88 KYIVKASSGPRYVVCCKVNIDVNLLKSGTRVALDMTTLTIMKVLPREVDPIIYNMLNKDD 147
Query: 202 --VEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKT 259
+ TY +GGL+ QIKE++EVIELP+K+P LF +GI PKGVLLYGPPGTGKT
Sbjct: 148 NAKDNKDKDTYNSIGGLNKQIKEMREVIELPLKNPYLFKRIGIKPPKGVLLYGPPGTGKT 207
Query: 260 LLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLT 319
LLARA+A+ C F++V S +V K+IGE ++++RE+F A
Sbjct: 208 LLARALANDLGCNFLKVVASAVVDKYIGESAKIIREMFGYA------------------- 248
Query: 320 ILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
+++ P IIF+DEID+IG R G+ D E+QRT++ELL LDGF+
Sbjct: 249 ----------KDNQPCIIFIDEIDAIGGRRFSQGTSADREIQRTLMELLTHLDGFD 294
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 35/46 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARA+A+ C F++V S +V K+IGE ++++RE+F A+
Sbjct: 204 TGKTLLARALANDLGCNFLKVVASAVVDKYIGESAKIIREMFGYAK 249
>gi|388501068|gb|AFK38600.1| unknown [Lotus japonicus]
Length = 400
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 115/280 (41%), Positives = 167/280 (59%), Gaps = 43/280 (15%)
Query: 110 QRNELNAKVRMLRE--------------ELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEG 155
Q EL ++VR +RE +L+ LQ G +GEV++P+DK++++VK
Sbjct: 25 QHKELESRVRSVRENLRASKKEYNKTEDDLKSLQSVGQIIGEVLRPLDKERLIVKASSGP 84
Query: 156 KFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGG 215
++VV +D +T RV L + T+ + LP +VDP+V M+ E + +Y VGG
Sbjct: 85 RYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYSMLHEDPGNVSYSAVGG 144
Query: 216 LDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIR 275
L +QI+E++E IELP+ +PELF +GI P+GVLLYGPPGTGKTLLARA+A + + F++
Sbjct: 145 LSDQIRELRESIELPLMNPELFLRVGIKPPRGVLLYGPPGTGKTLLARAIASNIDANFLK 204
Query: 276 VSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPS 335
V S ++ K+IGE +R++RE+F A R+H P
Sbjct: 205 VVSSAIIDKYIGESARLIREMFGYA-----------------------------RDHQPC 235
Query: 336 IIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
IIFMDEID+IG R G+ D E+QRT++ELLNQLDGF+
Sbjct: 236 IIFMDEIDAIGGLRFSEGTSADREIQRTLMELLNQLDGFD 275
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 35/46 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARA+A + + F++V S ++ K+IGE +R++RE+F AR
Sbjct: 185 TGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYAR 230
>gi|407929358|gb|EKG22190.1| ATPase AAA+ type core [Macrophomina phaseolina MS6]
Length = 439
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 119/264 (45%), Positives = 162/264 (61%), Gaps = 29/264 (10%)
Query: 113 ELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTP 172
++ A + ++EE L + + + + K +K K ++ V KFVV++ + + D+
Sbjct: 83 DIAADRQRMQEEQPLQVARCTKIIQDEKDSEKSKYVINVKQIAKFVVNLGERVSPTDIEE 142
Query: 173 NCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVK 232
RV + Y + LP K+DP V++M VE PD TY VGG QI++++EV+E+P+
Sbjct: 143 GMRVGVDRNKYQILLPLPPKIDPSVTMMTVEDKPDVTYGDVGGCKEQIEKLREVVEMPLL 202
Query: 233 HPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRM 292
PE F LGI PKG LLYGPPGTGKTL ARAVA+ T+ TFIRV GSELVQK++GEG+RM
Sbjct: 203 SPERFVNLGIDPPKGALLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARM 262
Query: 293 VRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIES 352
VRELF MA KK C IIF DE+D+IG +R +
Sbjct: 263 VRELFEMARTKK---------------------AC--------IIFFDEVDAIGGARFDD 293
Query: 353 GSGGDSEVQRTMLELLNQLDGFEA 376
G+GGD+EVQRTMLEL+ QLDGF++
Sbjct: 294 GAGGDNEVQRTMLELITQLDGFDS 317
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 226 TGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTK 273
>gi|242808787|ref|XP_002485236.1| proteasome regulatory particle subunit Rpt4, putative [Talaromyces
stipitatus ATCC 10500]
gi|218715861|gb|EED15283.1| proteasome regulatory particle subunit Rpt4, putative [Talaromyces
stipitatus ATCC 10500]
Length = 393
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 117/281 (41%), Positives = 169/281 (60%), Gaps = 29/281 (10%)
Query: 95 LIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPE 154
L + E E L+ L+ + + + + E ++ LQ G +GEV+K +D+++ +VK
Sbjct: 21 LDLREWEAKLKSLRMEIKDSQKEYDITEENIKALQSVGQIIGEVLKQLDEERFIVKASSG 80
Query: 155 GKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVG 214
++VV +D + + RVAL + T+ ++LP +VDPLV M +E + +G
Sbjct: 81 PRYVVGCRSKVDKSKLKQGTRVALDMTTLTIMRMLPREVDPLVYNMSLEDPGQVNFAGIG 140
Query: 215 GLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFI 274
GL++QI+E++EVIELP+K+PELF +GI PKGVLLYGPPGTGKTLLARAVA E F+
Sbjct: 141 GLNDQIRELREVIELPLKNPELFMRVGIKPPKGVLLYGPPGTGKTLLARAVASSLETNFL 200
Query: 275 RVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAP 334
+V S +V K+IGE +R++RE+F A +EH P
Sbjct: 201 KVVSSAIVDKYIGESARLIREMFGYA-----------------------------KEHEP 231
Query: 335 SIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
IIFMDEID+IG R G+ D E+QRT++ELLNQLDGF+
Sbjct: 232 CIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFD 272
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 34/46 (73%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA E F++V S +V K+IGE +R++RE+F A+
Sbjct: 182 TGKTLLARAVASSLETNFLKVVSSAIVDKYIGESARLIREMFGYAK 227
>gi|169769649|ref|XP_001819294.1| 26S protease subunit rpt4 [Aspergillus oryzae RIB40]
gi|83767153|dbj|BAE57292.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391863488|gb|EIT72796.1| 26S proteasome regulatory complex, ATPase RPT4 [Aspergillus oryzae
3.042]
Length = 393
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 117/277 (42%), Positives = 166/277 (59%), Gaps = 29/277 (10%)
Query: 99 EKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFV 158
E E L+ L+ +L + + E ++ LQ G +GEV+K +D+++ +VK ++V
Sbjct: 25 EWEAKLKSLRMGIKDLQREFDISEENIKALQSVGQIIGEVLKQLDEERFIVKASSGPRYV 84
Query: 159 VDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDN 218
V +D + + RVAL + T+ ++LP +VDPLV M +E + +GGL+
Sbjct: 85 VGCRSKVDKSKLKQGTRVALDMTTLTIMRMLPREVDPLVYNMSLEDPGQVNFAGIGGLNE 144
Query: 219 QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSG 278
QI+E++EVIELP+K+PELF +GI PKGVLLYGPPGTGKTLLARAVA E F++V
Sbjct: 145 QIRELREVIELPLKNPELFHRVGIKPPKGVLLYGPPGTGKTLLARAVASSMETNFLKVVS 204
Query: 279 SELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIF 338
S +V K+IGE +R++RE+F A +EH P IIF
Sbjct: 205 SAIVDKYIGESARLIREMFGYA-----------------------------KEHEPCIIF 235
Query: 339 MDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
MDEID+IG R G+ D E+QRT++ELLNQLDGF+
Sbjct: 236 MDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFD 272
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 34/46 (73%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA E F++V S +V K+IGE +R++RE+F A+
Sbjct: 182 TGKTLLARAVASSMETNFLKVVSSAIVDKYIGESARLIREMFGYAK 227
>gi|126179252|ref|YP_001047217.1| proteasome-activating nucleotidase [Methanoculleus marisnigri JR1]
gi|166199293|sp|A3CV35.1|PAN_METMJ RecName: Full=Proteasome-activating nucleotidase; Short=PAN;
AltName: Full=Proteasomal ATPase; AltName:
Full=Proteasome regulatory ATPase; AltName:
Full=Proteasome regulatory particle
gi|125862046|gb|ABN57235.1| Proteasome-activating nucleotidase [Methanoculleus marisnigri JR1]
Length = 412
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 119/293 (40%), Positives = 177/293 (60%), Gaps = 33/293 (11%)
Query: 87 VTKIEELQLIVAEK----EQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPM 142
+T +E L + E+ E R ++ Q+ ++R L+ E++ L+ +G V +
Sbjct: 25 ITNLENRNLELREQFRQMESEKRYVETQKIRYERELRKLKSEIEQLRSPPLVIGTVTDVI 84
Query: 143 DKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMV 202
D +V+V+ +F+V + ID + + P R L +S + +LP D + M +
Sbjct: 85 DNSRVIVRSSAGPRFLVRTSQLIDPDLLKPGVRCTLNQQSLAIVDVLPTSYDAQIYGMEL 144
Query: 203 EKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 262
+ P+ TYE +GGL+ QI+EI+E +ELP+ P+LF+ +GI+ PKGVLLYGPPGTGKTLLA
Sbjct: 145 VESPEETYENIGGLEPQIEEIREAVELPLTKPQLFEKVGISPPKGVLLYGPPGTGKTLLA 204
Query: 263 RAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILT 322
RAVAH T F+RV GSELVQK+IGEG+R+VRELF +A
Sbjct: 205 RAVAHQTNAHFLRVVGSELVQKYIGEGARLVRELFDLA---------------------- 242
Query: 323 NTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
++ APSIIF+DEID+IG+ R +S + GD EVQRT+++LL ++DGF+
Sbjct: 243 -------KQRAPSIIFIDEIDAIGAHRNDSTTSGDREVQRTLMQLLAEMDGFD 288
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 42/51 (82%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
+GKTLLARAVAH T F+RV GSELVQK+IGEG+R+VRELF +A+ + S
Sbjct: 198 TGKTLLARAVAHQTNAHFLRVVGSELVQKYIGEGARLVRELFDLAKQRAPS 248
>gi|190348879|gb|EDK41426.2| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 445
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 113/233 (48%), Positives = 149/233 (63%), Gaps = 29/233 (12%)
Query: 143 DKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMV 202
+K K ++ + KFVV + + + D+ RV + + Y + LP ++DP V++M V
Sbjct: 119 NKAKYVINIKQIAKFVVGLGERVSPTDIEEGMRVGVDRQKYEIQLPLPPRIDPSVTMMTV 178
Query: 203 EKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 262
E+ PD TY VGG QI++++EV+ELP+ PE F LGI PKG+LLYGPPGTGKTL A
Sbjct: 179 EEKPDVTYSDVGGCKEQIEKLREVVELPLLSPERFVKLGIDPPKGILLYGPPGTGKTLCA 238
Query: 263 RAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILT 322
RAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 239 RAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKK------------------ 280
Query: 323 NTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C IIF DE+D+IG +R + G+GGD+EVQRTMLEL+ QLDGF+
Sbjct: 281 ---AC--------IIFFDEVDAIGGARFDDGAGGDNEVQRTMLELITQLDGFD 322
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 232 TGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTK 279
>gi|189204227|ref|XP_001938449.1| 26S protease regulatory subunit 7 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187985548|gb|EDU51036.1| 26S protease regulatory subunit 7 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 438
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 115/234 (49%), Positives = 148/234 (63%), Gaps = 29/234 (12%)
Query: 143 DKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMV 202
+K K ++ V KFVV++ + + D+ RV + Y + LP K+DP V++M V
Sbjct: 112 EKSKYVINVKQIAKFVVNLGERVSPTDIEEGMRVGVDRNKYQILLPLPPKIDPSVTMMTV 171
Query: 203 EKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 262
E PD TY VGG QI++++EV+E+P+ PE F LGI PKG LLYGPPGTGKTL A
Sbjct: 172 EDKPDVTYGDVGGCKEQIEKLREVVEMPLLSPERFVNLGIDPPKGALLYGPPGTGKTLCA 231
Query: 263 RAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILT 322
RAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 232 RAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKK------------------ 273
Query: 323 NTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
C IIF DEID++G +R + G+GGD+EVQRTMLEL+ QLDGF+A
Sbjct: 274 ---AC--------IIFFDEIDAVGGARFDDGAGGDNEVQRTMLELITQLDGFDA 316
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 225 TGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTK 272
>gi|328849304|gb|EGF98487.1| ATP-dependent 26S proteasome regulatory subunit [Melampsora
larici-populina 98AG31]
Length = 480
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 116/233 (49%), Positives = 149/233 (63%), Gaps = 29/233 (12%)
Query: 143 DKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMV 202
++ K ++ V KFVV + + + D+ RV + Y + LP K+DP V++M V
Sbjct: 148 EEDKYVINVKQIAKFVVGLGERVAPTDIEEGMRVGVDRTKYQIQIPLPPKIDPSVTMMQV 207
Query: 203 EKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 262
E+ PD TY VGG QI++++EV+E P+ +PE F ALGI PKGV+LYGPPGTGKTL A
Sbjct: 208 EEKPDVTYSDVGGCKEQIEKLREVVETPLLNPEKFVALGIDPPKGVMLYGPPGTGKTLCA 267
Query: 263 RAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILT 322
RAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 268 RAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKK------------------ 309
Query: 323 NTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C IIF DEID+IG +R + G GGD+EVQRTMLEL+NQLDGF+
Sbjct: 310 ---AC--------IIFFDEIDAIGGARHDDGQGGDNEVQRTMLELINQLDGFD 351
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 261 TGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTK 308
>gi|401409344|ref|XP_003884120.1| hypothetical protein NCLIV_045220 [Neospora caninum Liverpool]
gi|325118538|emb|CBZ54089.1| hypothetical protein NCLIV_045220 [Neospora caninum Liverpool]
Length = 398
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 120/290 (41%), Positives = 171/290 (58%), Gaps = 33/290 (11%)
Query: 86 YVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKK 145
YV K++E + E E +++L+ + + + + E+L+ LQ G +GEV+K +D +
Sbjct: 22 YVAKVKEHR----ECEAKVKKLREEVKKQSGRYEKTEEDLKALQGVGQLIGEVLKQLDSE 77
Query: 146 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
K +VK +++V ID +T RVAL + T+ + L +VDPLV M+ E
Sbjct: 78 KFIVKTSSGPRYMVGSKPKIDKASLTAGTRVALDMTTLTVMRKLQREVDPLVFNMLHEDP 137
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
Y VGGL QI++++EVIELP+ +PELF +GI PKGVLLYGPPGTGKTLLARA+
Sbjct: 138 GSVQYGEVGGLSEQIRQMREVIELPLTNPELFKRVGIKTPKGVLLYGPPGTGKTLLARAM 197
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTI 325
A + C F++V S +V K+IGE +R++RE+F A
Sbjct: 198 ASNMNCNFMKVVASAIVDKYIGESARVIREMFAYA------------------------- 232
Query: 326 VCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
R+H P IIFMDEID+IG R G+ D E+QRT++ELLNQLDGF+
Sbjct: 233 ----RDHEPCIIFMDEIDAIGGRRFSQGTSADREIQRTLMELLNQLDGFD 278
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 35/46 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARA+A + C F++V S +V K+IGE +R++RE+F AR
Sbjct: 188 TGKTLLARAMASNMNCNFMKVVASAIVDKYIGESARVIREMFAYAR 233
>gi|407921499|gb|EKG14641.1| ATPase AAA+ type core [Macrophomina phaseolina MS6]
Length = 394
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 123/301 (40%), Positives = 175/301 (58%), Gaps = 32/301 (10%)
Query: 78 SSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVR---MLREELQLLQEQGSY 134
S G P +EE + + E + +L+A R E+ R + E ++ LQ G
Sbjct: 2 SGTGLDPEREHALEEYKAKLLESREWEAKLKALRLEIKGLQRDYDVSEENIKALQSVGQI 61
Query: 135 VGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVD 194
+GEV+K +D+++ +VK ++VV +D + RVAL + T+ ++LP +VD
Sbjct: 62 IGEVLKQLDEERFIVKASSGPRYVVGCRSKVDKAKLKQGTRVALDMTTLTIMRMLPREVD 121
Query: 195 PLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPP 254
PLV M +E ++ +GGL+ QI+E++EVIELP+K+PELF +GI PKGVLLYGPP
Sbjct: 122 PLVYNMSLEDPGQVSFGGIGGLNEQIRELREVIELPLKNPELFLRVGIKPPKGVLLYGPP 181
Query: 255 GTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLF 314
GTGKTLLARAVA E F++V S +V K+IGE +R++RE+F A
Sbjct: 182 GTGKTLLARAVASSLETNFLKVVSSAIVDKYIGESARLIREMFGYA-------------- 227
Query: 315 WSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGF 374
+EH P IIFMDEID+IG R G+ D E+QRT++ELLNQLDGF
Sbjct: 228 ---------------KEHEPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGF 272
Query: 375 E 375
+
Sbjct: 273 D 273
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 34/46 (73%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA E F++V S +V K+IGE +R++RE+F A+
Sbjct: 183 TGKTLLARAVASSLETNFLKVVSSAIVDKYIGESARLIREMFGYAK 228
>gi|402081481|gb|EJT76626.1| 26S protease regulatory subunit 4 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 461
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 121/292 (41%), Positives = 180/292 (61%), Gaps = 35/292 (11%)
Query: 86 YVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGS--YVGEVVKPMD 143
YV E L+ A K+ N A ++++A RM E ++ +GS VG + + +D
Sbjct: 83 YVENQERLRRAKAAKDSN----AAPSSDVDAGDRMADERGRVDDMRGSPMGVGTLEEMID 138
Query: 144 KKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVE 203
+V ++ V I +D + + P V L ++S ++ +L + DPLVS+M ++
Sbjct: 139 DDHAIVSSTTGPEYYVSIMSFVDKDLLEPGASVLLHHKSVSIVGVLTDDADPLVSVMKLD 198
Query: 204 KVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLAR 263
K P +Y +GGL+ QI+E++E +ELP+ HPEL++ +GI PKGV+LYG PGTGKTLLA+
Sbjct: 199 KAPTESYADIGGLEQQIQEVRESVELPLLHPELYEEMGIKPPKGVILYGAPGTGKTLLAK 258
Query: 264 AVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTN 323
AVA+ T TF+R+ GSEL+QK++G+G R+VR+LF +A+
Sbjct: 259 AVANQTSATFLRIVGSELIQKYLGDGPRLVRQLFQVAA---------------------- 296
Query: 324 TIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
E+APSI+F+DEID+IG+ R +S SGG+ EVQRTMLELLNQLDGF+
Sbjct: 297 -------ENAPSIVFIDEIDAIGTKRYDSTSGGEREVQRTMLELLNQLDGFD 341
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+R+ GSEL+QK++G+G R+VR+LF +A
Sbjct: 251 TGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPRLVRQLFQVA 295
>gi|315046434|ref|XP_003172592.1| 26S protease regulatory subunit 7 [Arthroderma gypseum CBS 118893]
gi|311342978|gb|EFR02181.1| 26S protease regulatory subunit 7 [Arthroderma gypseum CBS 118893]
Length = 439
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 120/264 (45%), Positives = 161/264 (60%), Gaps = 29/264 (10%)
Query: 113 ELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTP 172
++ A + + EE L + + + + K +K K ++ V KFVV++ + + D+
Sbjct: 83 DIAADRQRMAEEQPLQVARCTKIIQDEKDSEKSKYVINVKQIAKFVVNLGERVSPTDIEE 142
Query: 173 NCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVK 232
RV + Y + LP K+DP V++M VE PD TY VGG QI++++EV+E+P+
Sbjct: 143 GMRVGVDRNKYQILLPLPPKIDPSVTMMTVEDKPDVTYGDVGGSKEQIEKLREVVEMPLL 202
Query: 233 HPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRM 292
PE F LGI PKG LLYGPPGTGKTL ARAVA+ T+ TFIRV GSELVQK++GEG+RM
Sbjct: 203 SPERFVGLGIDPPKGALLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARM 262
Query: 293 VRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIES 352
VRELF MA KK C IIF DEID+IG +R +
Sbjct: 263 VRELFEMARTKK---------------------AC--------IIFFDEIDAIGGARFDD 293
Query: 353 GSGGDSEVQRTMLELLNQLDGFEA 376
G+GGD+EVQRTMLEL+ QLDGF++
Sbjct: 294 GAGGDNEVQRTMLELITQLDGFDS 317
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 226 TGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTK 273
>gi|452848473|gb|EME50405.1| hypothetical protein DOTSEDRAFT_141754 [Dothistroma septosporum
NZE10]
Length = 439
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 115/237 (48%), Positives = 149/237 (62%), Gaps = 29/237 (12%)
Query: 140 KPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSL 199
K +K K ++ V KFVV++ + + D+ RV + Y + LP K+DP V++
Sbjct: 110 KDSEKSKYVINVKQIAKFVVNLGERVSPTDIEEGMRVGVDRNKYQIMLPLPPKIDPSVTM 169
Query: 200 MMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKT 259
M VE PD TY VGG QI++++EV+E+P+ PE F LGI PKG LLYGPPGTGKT
Sbjct: 170 MTVEDKPDVTYGDVGGCKEQIEKLREVVEMPLLSPERFVNLGIDPPKGALLYGPPGTGKT 229
Query: 260 LLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLT 319
L ARAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 230 LCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKK--------------- 274
Query: 320 ILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
C IIF DEID++G +R + G+GGD+EVQRTMLEL+ QLDGF++
Sbjct: 275 ------AC--------IIFFDEIDAVGGARFDDGAGGDNEVQRTMLELITQLDGFDS 317
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 226 TGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTK 273
>gi|301787789|ref|XP_002929310.1| PREDICTED: 26S protease regulatory subunit 10B-like [Ailuropoda
melanoleuca]
Length = 403
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 117/278 (42%), Positives = 164/278 (58%), Gaps = 29/278 (10%)
Query: 99 EKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFV 158
E + L+ L+ Q EL + +L+ LQ G VGEV+K + ++K +VK ++V
Sbjct: 35 EIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYV 94
Query: 159 VDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDN 218
V + +D + + P RVAL + T+ + LP +VDPLV M E + +Y +GGL
Sbjct: 95 VGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSE 154
Query: 219 QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSG 278
QI+E++EVIELP+ +PELF +GI PKG LLYGPPGTGKTLLARAVA +C F++V
Sbjct: 155 QIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVS 214
Query: 279 SELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIF 338
S +V K+IGE + ++RE+F A R+H P IIF
Sbjct: 215 SSIVDKYIGESACLIREMFNYA-----------------------------RDHQPCIIF 245
Query: 339 MDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
MDEID+IG R G+ D E+QRT++ELLNQ+DGF+
Sbjct: 246 MDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDT 283
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 34/46 (73%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA +C F++V S +V K+IGE + ++RE+F AR
Sbjct: 192 TGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESACLIREMFNYAR 237
>gi|429329213|gb|AFZ80972.1| 26S proteasome ATPase subunit, putative [Babesia equi]
Length = 404
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 121/296 (40%), Positives = 174/296 (58%), Gaps = 39/296 (13%)
Query: 86 YVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKK 145
YV K+ E + + E +++L++ +EL AK ++L+ LQ G VG V++P+D
Sbjct: 21 YVKKVREHR----DLEAKIKKLRSDMSELTAKDEKYEQDLKALQSIGQIVGHVLRPIDDN 76
Query: 146 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVE-- 203
K +VK ++VV NID + +T RVAL + T+ K LP +VDP+V M+ +
Sbjct: 77 KFIVKASSGPRYVVCCKVNIDPSTLTSGSRVALDMTTLTIMKKLPREVDPVVFNMLNDVE 136
Query: 204 ----KVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKT 259
K Y+ +GGL QI+E++EVIELP+++P LF +GI PKGVLLYGPPGTGKT
Sbjct: 137 LVDGKARKEGYDSIGGLRKQIREMREVIELPLRNPFLFHRVGIKPPKGVLLYGPPGTGKT 196
Query: 260 LLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLT 319
LLARA+A +C F++V S +V K+IGE ++++RE+F A
Sbjct: 197 LLARALASDIDCNFLKVVASAVVDKYIGESAKIIREMFGYA------------------- 237
Query: 320 ILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
+EH P IIFMDEID+IG R G+ D E+QRT++ELL LDGF+
Sbjct: 238 ----------KEHQPCIIFMDEIDAIGGRRFSQGTSADREIQRTLMELLTHLDGFD 283
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 35/46 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARA+A +C F++V S +V K+IGE ++++RE+F A+
Sbjct: 193 TGKTLLARALASDIDCNFLKVVASAVVDKYIGESAKIIREMFGYAK 238
>gi|410082659|ref|XP_003958908.1| hypothetical protein KAFR_0H03630 [Kazachstania africana CBS 2517]
gi|372465497|emb|CCF59773.1| hypothetical protein KAFR_0H03630 [Kazachstania africana CBS 2517]
Length = 448
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 114/233 (48%), Positives = 147/233 (63%), Gaps = 29/233 (12%)
Query: 143 DKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMV 202
D K ++ + KFVV + + + D+ RV + Y + LP ++DP V++M V
Sbjct: 122 DDAKYVINLKQIAKFVVGLGERVSPTDIEEGMRVGVDRSKYHIELPLPPRIDPTVTMMTV 181
Query: 203 EKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 262
E+ PD TY VGG QI++++EV+ELP+ PE F LGI PKG+LLYGPPGTGKTL A
Sbjct: 182 EEKPDVTYSDVGGCKEQIEKLREVVELPLLSPERFATLGIDPPKGILLYGPPGTGKTLCA 241
Query: 263 RAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILT 322
RAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 242 RAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKK------------------ 283
Query: 323 NTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C IIF DEID+IG +R + G+GGD+EVQRTMLEL+ QLDGF+
Sbjct: 284 ---AC--------IIFFDEIDAIGGARFDDGAGGDNEVQRTMLELITQLDGFD 325
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 235 TGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTK 282
>gi|281344564|gb|EFB20148.1| hypothetical protein PANDA_019466 [Ailuropoda melanoleuca]
Length = 389
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 117/278 (42%), Positives = 164/278 (58%), Gaps = 29/278 (10%)
Query: 99 EKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFV 158
E + L+ L+ Q EL + +L+ LQ G VGEV+K + ++K +VK ++V
Sbjct: 21 EIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYV 80
Query: 159 VDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDN 218
V + +D + + P RVAL + T+ + LP +VDPLV M E + +Y +GGL
Sbjct: 81 VGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSE 140
Query: 219 QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSG 278
QI+E++EVIELP+ +PELF +GI PKG LLYGPPGTGKTLLARAVA +C F++V
Sbjct: 141 QIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVS 200
Query: 279 SELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIF 338
S +V K+IGE + ++RE+F A R+H P IIF
Sbjct: 201 SSIVDKYIGESACLIREMFNYA-----------------------------RDHQPCIIF 231
Query: 339 MDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
MDEID+IG R G+ D E+QRT++ELLNQ+DGF+
Sbjct: 232 MDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDT 269
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 34/46 (73%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA +C F++V S +V K+IGE + ++RE+F AR
Sbjct: 178 TGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESACLIREMFNYAR 223
>gi|295672730|ref|XP_002796911.1| 26S protease regulatory subunit [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226282283|gb|EEH37849.1| 26S protease regulatory subunit [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 354
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 117/277 (42%), Positives = 166/277 (59%), Gaps = 29/277 (10%)
Query: 99 EKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFV 158
E E L+ L+ +L + E ++ LQ G +GEV+K +D+++ +VK ++V
Sbjct: 25 EWEAKLKNLRLGIKDLQKEFDTTEENIKALQSVGQIIGEVLKQLDEERFIVKASSGPRYV 84
Query: 159 VDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDN 218
V +D + RVAL + T+ ++LP +VDPLV M +E ++ +GGL++
Sbjct: 85 VGCRSKVDKTKLKQGTRVALDMTTLTIMRMLPREVDPLVYNMSLEDPGQISFAGIGGLND 144
Query: 219 QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSG 278
QI+E++EVIELP+K+PELF +GI PKGVLLYGPPGTGKTLLARAVA E F++V
Sbjct: 145 QIRELREVIELPLKNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAVASSLETNFLKVVS 204
Query: 279 SELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIF 338
S +V K+IGE +R++RE+F A +EH P IIF
Sbjct: 205 SAIVDKYIGESARLIREMFGYA-----------------------------KEHEPCIIF 235
Query: 339 MDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
MDEID+IG R G+ D E+QRT++ELLNQLDGF+
Sbjct: 236 MDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFD 272
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 34/46 (73%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA E F++V S +V K+IGE +R++RE+F A+
Sbjct: 182 TGKTLLARAVASSLETNFLKVVSSAIVDKYIGESARLIREMFGYAK 227
>gi|453088265|gb|EMF16305.1| 26S protease regulatory subunit 8 [Mycosphaerella populorum SO2202]
Length = 439
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 115/237 (48%), Positives = 149/237 (62%), Gaps = 29/237 (12%)
Query: 140 KPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSL 199
K +K K ++ V KFVV++ + + D+ RV + Y + LP K+DP V++
Sbjct: 110 KDSEKSKYVINVKQIAKFVVNLGERVSPTDIEEGMRVGVDRNKYQIMLPLPPKIDPSVTM 169
Query: 200 MMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKT 259
M VE PD TY VGG QI++++EV+E+P+ PE F LGI PKG LLYGPPGTGKT
Sbjct: 170 MTVEDKPDVTYGDVGGCKEQIEKLREVVEMPLLSPERFVNLGIDPPKGALLYGPPGTGKT 229
Query: 260 LLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLT 319
L ARAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 230 LCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKK--------------- 274
Query: 320 ILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
C IIF DEID++G +R + G+GGD+EVQRTMLEL+ QLDGF++
Sbjct: 275 ------AC--------IIFFDEIDAVGGARFDDGAGGDNEVQRTMLELITQLDGFDS 317
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 226 TGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTK 273
>gi|402086352|gb|EJT81250.1| 26S protease subunit rpt4 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 390
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 117/277 (42%), Positives = 165/277 (59%), Gaps = 29/277 (10%)
Query: 99 EKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFV 158
E E L+ L+ + L + E ++ LQ G +GEV+K +D ++ +VK ++V
Sbjct: 22 EWESKLKNLRLEIKGLQKEFDQTEENIKALQSVGQIIGEVLKQLDDERFIVKASSGPRYV 81
Query: 159 VDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDN 218
V +D + RVAL + T+ ++LP +VDPLV M +E ++ +GGL++
Sbjct: 82 VGCRSKVDKAKLKQGTRVALDMTTLTIMRMLPREVDPLVYNMSLEDPGQVSFAGIGGLND 141
Query: 219 QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSG 278
QI+E++EVIELP+K+PELF +GI PKGVLLYGPPGTGKTLLARAVA E F++V
Sbjct: 142 QIRELREVIELPLKNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAVASSLETNFLKVVS 201
Query: 279 SELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIF 338
S +V K+IGE +R++RE+F A +EH P IIF
Sbjct: 202 SAIVDKYIGESARLIREMFGYA-----------------------------KEHEPCIIF 232
Query: 339 MDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
MDEID+IG R G+ D E+QRT++ELLNQLDGF+
Sbjct: 233 MDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFD 269
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 34/46 (73%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA E F++V S +V K+IGE +R++RE+F A+
Sbjct: 179 TGKTLLARAVASSLETNFLKVVSSAIVDKYIGESARLIREMFGYAK 224
>gi|398412035|ref|XP_003857349.1| proteasome regulatory particle subunit RPT1 [Zymoseptoria tritici
IPO323]
gi|339477234|gb|EGP92325.1| hypothetical protein MYCGRDRAFT_53126 [Zymoseptoria tritici IPO323]
Length = 438
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 114/234 (48%), Positives = 148/234 (63%), Gaps = 29/234 (12%)
Query: 143 DKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMV 202
+K K ++ V KFVV++ + + D+ RV + Y + LP K+DP V++M V
Sbjct: 112 EKSKYVINVKQIAKFVVNLGERVSPTDIEEGMRVGVDRNKYQIMLPLPPKIDPSVTMMTV 171
Query: 203 EKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 262
E PD TY VGG QI++++EV+E+P+ PE F LGI PKG LLYGPPGTGKTL A
Sbjct: 172 EDKPDVTYGDVGGCKEQIEKLREVVEMPLLSPERFVNLGIDPPKGALLYGPPGTGKTLCA 231
Query: 263 RAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILT 322
RAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 232 RAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKK------------------ 273
Query: 323 NTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
C IIF DEID++G +R + G+GGD+EVQRTMLEL+ QLDGF++
Sbjct: 274 ---AC--------IIFFDEIDAVGGARFDDGAGGDNEVQRTMLELITQLDGFDS 316
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 225 TGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTK 272
>gi|225562323|gb|EEH10602.1| 26S protease regulatory subunit [Ajellomyces capsulatus G186AR]
gi|325089508|gb|EGC42818.1| 26S protease regulatory subunit S10B [Ajellomyces capsulatus H88]
Length = 392
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 122/299 (40%), Positives = 174/299 (58%), Gaps = 32/299 (10%)
Query: 80 EGFKPYYVTKIEELQ---LIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVG 136
EG P +EE + L E E L+ L+ +L + + ++ LQ G +G
Sbjct: 2 EGVDPEREQALEEYKKSLLESREWEAKLKDLRLGIKDLQKEFDTTEDNIKALQSVGQIIG 61
Query: 137 EVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPL 196
EV+K +D+++ +VK ++VV +D + RVAL + T+ ++LP +VDPL
Sbjct: 62 EVLKQLDEERFIVKASSGPRYVVGCRSKVDKAKLKQGTRVALDMTTLTIMRMLPREVDPL 121
Query: 197 VSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGT 256
V M +E ++ +GGL++QI+E++EVIELP+K+PELF +GI PKGVLLYGPPGT
Sbjct: 122 VYNMSLEDPGQVSFAGIGGLNDQIRELREVIELPLKNPELFLRVGIKPPKGVLLYGPPGT 181
Query: 257 GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWS 316
GKTLLARAVA E F++V S +V K+IGE +R++RE+F A
Sbjct: 182 GKTLLARAVASSLETNFLKVVSSAIVDKYIGESARLIREMFGYA---------------- 225
Query: 317 LLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
+EH P IIFMDEID+IG R G+ D E+QRT++ELLNQLDGF+
Sbjct: 226 -------------KEHEPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFD 271
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 34/46 (73%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA E F++V S +V K+IGE +R++RE+F A+
Sbjct: 181 TGKTLLARAVASSLETNFLKVVSSAIVDKYIGESARLIREMFGYAK 226
>gi|409078250|gb|EKM78613.1| hypothetical protein AGABI1DRAFT_114231 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 446
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 121/292 (41%), Positives = 181/292 (61%), Gaps = 38/292 (13%)
Query: 89 KIEELQLIVAEKEQNLRRLQAQ--RNELNAKVRMLREELQLLQEQGS--YVGEVVKPMDK 144
+I++ L+ E N RL+ + R E N + R ++L+ GS VG + + +D
Sbjct: 70 RIKDYLLMEEEFVHNQERLKPETTREEKNEEDRSKVDDLR-----GSPMAVGTLEEIIDD 124
Query: 145 KKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEK 204
++ +F V I +D + + P C+V L +++ ++ +L + DP+VS+M ++K
Sbjct: 125 DHAIISTASGPEFYVSIMSYVDKDLLEPGCQVLLHHKTQSVVGVLQDDADPMVSVMKLDK 184
Query: 205 VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 264
P +Y +GGL+ QI+EIKE +ELP+ HPEL++ +GI PKGV+LYG PGTGKTLLA+A
Sbjct: 185 APTESYADIGGLEQQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGVPGTGKTLLAKA 244
Query: 265 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNT 324
VA+ T TF+R+ GSEL+QK++G+G ++VRELF +A
Sbjct: 245 VANQTSATFLRIVGSELIQKYLGDGPKLVRELFRVAE----------------------- 281
Query: 325 IVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
EHAPSI+F+DEID++G+ R ES SGG+ E+QRTMLELLNQLDGF+
Sbjct: 282 ------EHAPSIVFIDEIDAVGTKRYESTSGGEREIQRTMLELLNQLDGFDT 327
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+R+ GSEL+QK++G+G ++VRELF +A
Sbjct: 236 TGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPKLVRELFRVA 280
>gi|307190651|gb|EFN74615.1| 26S protease regulatory subunit S10B [Camponotus floridanus]
Length = 389
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 117/278 (42%), Positives = 163/278 (58%), Gaps = 29/278 (10%)
Query: 99 EKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFV 158
E E L+ ++ +L + +L+ LQ G VGEV+K + ++K +VK ++V
Sbjct: 21 EVESRLKEMREHFKDLTKQYDKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYV 80
Query: 159 VDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDN 218
V + +D N + RVAL + T+ + LP +VDPLV M E D TY +GGL
Sbjct: 81 VGCRRQLDKNKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDVTYSAIGGLSE 140
Query: 219 QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSG 278
QI+E++EVIELP+ +PELF +GI PKG LLYGPPGTGKTLLARAVA + F++V
Sbjct: 141 QIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVS 200
Query: 279 SELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIF 338
S +V K+IGE +R++RE+F A R+H P IIF
Sbjct: 201 SAIVDKYIGESARLIREMFNYA-----------------------------RDHQPCIIF 231
Query: 339 MDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
MDEID+IG R G+ D E+QRT++ELLNQ+DGF++
Sbjct: 232 MDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDS 269
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 34/46 (73%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA + F++V S +V K+IGE +R++RE+F AR
Sbjct: 178 TGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYAR 223
>gi|300708081|ref|XP_002996228.1| hypothetical protein NCER_100711 [Nosema ceranae BRL01]
gi|239605510|gb|EEQ82557.1| hypothetical protein NCER_100711 [Nosema ceranae BRL01]
Length = 397
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 121/274 (44%), Positives = 165/274 (60%), Gaps = 29/274 (10%)
Query: 102 QNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDI 161
NL+ Q + N + ++++ LQ G VGEV+K + ++ +VK ++VV
Sbjct: 32 NNLKMEQEIYKQTNKQFIKSEKDVKALQTIGQIVGEVLKKITDERFIVKSSQGPRYVVGC 91
Query: 162 DKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIK 221
KNID + + RVAL + T+ +LP +VDP+V M +K D +E VGGL NQI+
Sbjct: 92 MKNIDRSLLKSGTRVALDITTLTIMHVLPREVDPMVYSMSEDKPIDIGFESVGGLKNQIR 151
Query: 222 EIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSEL 281
E+KEVIELP+K+PE++ +GI PKGVLLYGPPGTGKTLLARA A +C F++V S L
Sbjct: 152 ELKEVIELPIKNPEIYKRVGIKAPKGVLLYGPPGTGKTLLARATAATMDCNFLKVVASAL 211
Query: 282 VQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDE 341
++K+IGE SRM+RE+F A RE AP +IF+DE
Sbjct: 212 IEKYIGESSRMIREMFAYA-----------------------------REKAPCVIFLDE 242
Query: 342 IDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
ID+IG R S D EVQRT++ELLNQLDGF+
Sbjct: 243 IDAIGGKRSSESSSSDREVQRTLMELLNQLDGFK 276
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 36/49 (73%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKG 60
+GKTLLARA A +C F++V S L++K+IGE SRM+RE+F AR K
Sbjct: 186 TGKTLLARATAATMDCNFLKVVASALIEKYIGESSRMIREMFAYAREKA 234
>gi|296805902|ref|XP_002843775.1| 26S protease regulatory subunit 7 [Arthroderma otae CBS 113480]
gi|238845077|gb|EEQ34739.1| 26S protease regulatory subunit 7 [Arthroderma otae CBS 113480]
Length = 439
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 116/237 (48%), Positives = 148/237 (62%), Gaps = 29/237 (12%)
Query: 140 KPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSL 199
K +K K ++ V KFVV++ + D+ RV + Y + LP K+DP V++
Sbjct: 110 KDAEKSKYVINVKQIAKFVVNLGDRVSPTDIEEGMRVGVDRNKYQILLPLPPKIDPSVTM 169
Query: 200 MMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKT 259
M VE PD TY VGG QI++++EV+E+P+ PE F LGI PKG LLYGPPGTGKT
Sbjct: 170 MTVEDKPDVTYGDVGGSKEQIEKLREVVEMPLLSPERFVGLGIDPPKGALLYGPPGTGKT 229
Query: 260 LLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLT 319
L ARAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 230 LCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKK--------------- 274
Query: 320 ILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
C IIF DEID+IG +R + G+GGD+EVQRTMLEL+ QLDGF++
Sbjct: 275 ------AC--------IIFFDEIDAIGGARFDDGAGGDNEVQRTMLELITQLDGFDS 317
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 226 TGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTK 273
>gi|56756889|gb|AAW26616.1| SJCHGC09284 protein [Schistosoma japonicum]
gi|226471214|emb|CAX70688.1| proteasome (prosome, macropain) 26S subunit, ATPase 2 [Schistosoma
japonicum]
gi|226488012|emb|CAX75671.1| proteasome (prosome, macropain) 26S subunit, ATPase 2 [Schistosoma
japonicum]
gi|226488014|emb|CAX75672.1| proteasome (prosome, macropain) 26S subunit, ATPase 2 [Schistosoma
japonicum]
Length = 433
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 114/230 (49%), Positives = 145/230 (63%), Gaps = 29/230 (12%)
Query: 146 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
K ++ V KFVVD+ + D+ RV + Y +H LP K+DP V++M VE
Sbjct: 110 KYIINVKQFAKFVVDLADTVAPTDIEEGMRVGVDRTKYQIHIPLPPKIDPSVTMMQVEDK 169
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
PD TY VGG QI++++EV+ELP+ HPE F LGI PKGVLL+GPPGTGKTL ARAV
Sbjct: 170 PDVTYSDVGGCKEQIEKLREVVELPLLHPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAV 229
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTI 325
A+ T+ FIRV GSELVQK++GEG+RMVRELF +A KK
Sbjct: 230 ANRTDACFIRVIGSELVQKYVGEGARMVRELFELARSKKAC------------------- 270
Query: 326 VCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
IIF DEID++G +R + G GG++EVQRTMLEL+NQLDGF+
Sbjct: 271 ----------IIFFDEIDAVGGARFDDGLGGENEVQRTMLELINQLDGFD 310
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF +AR K
Sbjct: 220 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFELARSK 267
>gi|426199241|gb|EKV49166.1| hypothetical protein AGABI2DRAFT_191249 [Agaricus bisporus var.
bisporus H97]
Length = 446
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 121/292 (41%), Positives = 181/292 (61%), Gaps = 38/292 (13%)
Query: 89 KIEELQLIVAEKEQNLRRLQAQ--RNELNAKVRMLREELQLLQEQGS--YVGEVVKPMDK 144
+I++ L+ E N RL+ + R E N + R ++L+ GS VG + + +D
Sbjct: 70 RIKDYLLMEEEFVHNQERLKPETTREEKNEEDRSKVDDLR-----GSPMAVGTLEEIIDD 124
Query: 145 KKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEK 204
++ +F V I +D + + P C+V L +++ ++ +L + DP+VS+M ++K
Sbjct: 125 DHAIISTASGPEFYVSIMSYVDKDLLEPGCQVLLHHKTQSVVGVLQDDADPMVSVMKLDK 184
Query: 205 VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 264
P +Y +GGL+ QI+EIKE +ELP+ HPEL++ +GI PKGV+LYG PGTGKTLLA+A
Sbjct: 185 APTESYADIGGLEQQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGVPGTGKTLLAKA 244
Query: 265 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNT 324
VA+ T TF+R+ GSEL+QK++G+G ++VRELF +A
Sbjct: 245 VANQTSATFLRIVGSELIQKYLGDGPKLVRELFRVAE----------------------- 281
Query: 325 IVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
EHAPSI+F+DEID++G+ R ES SGG+ E+QRTMLELLNQLDGF+
Sbjct: 282 ------EHAPSIVFIDEIDAVGTKRYESTSGGEREIQRTMLELLNQLDGFDT 327
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+R+ GSEL+QK++G+G ++VRELF +A
Sbjct: 236 TGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPKLVRELFRVA 280
>gi|402224692|gb|EJU04754.1| 26S proteasome subunit P45 [Dacryopinax sp. DJM-731 SS1]
Length = 447
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 110/241 (45%), Positives = 157/241 (65%), Gaps = 29/241 (12%)
Query: 135 VGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVD 194
VG + + +D ++ ++ V I +D + + P C V L +++ + +L + D
Sbjct: 116 VGSLEEIIDDDHAIISTASGPEYYVSIMSFVDKDLLEPGCSVLLHHKTSAVIGVLQDDTD 175
Query: 195 PLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPP 254
P+V++M ++K P +Y VGGLDNQI+EIKE +ELP+ HPEL++ +GI PKGV+LYG P
Sbjct: 176 PMVNVMKLDKAPTESYADVGGLDNQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGVP 235
Query: 255 GTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLF 314
GTGKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 236 GTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAE------------- 282
Query: 315 WSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGF 374
EHAPSI+F+DEID+IG+ R +S SGG+ E+QRTMLELLNQLDGF
Sbjct: 283 ----------------EHAPSIVFIDEIDAIGTKRYDSTSGGEREIQRTMLELLNQLDGF 326
Query: 375 E 375
+
Sbjct: 327 D 327
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 237 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 281
>gi|148225468|ref|NP_001090469.1| proteasome (prosome, macropain) 26S subunit, ATPase, 6 [Xenopus
laevis]
gi|67677964|gb|AAH97594.1| MGC114813 protein [Xenopus laevis]
Length = 389
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 117/278 (42%), Positives = 163/278 (58%), Gaps = 29/278 (10%)
Query: 99 EKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFV 158
E + L+ L+ Q EL + +L+ LQ G VGEV+K + ++K +VK ++V
Sbjct: 21 EIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYV 80
Query: 159 VDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDN 218
V + +D + + RVAL + T+ + LP +VDPLV M E +Y +GGL
Sbjct: 81 VGCRRQLDKSKLKAGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGSVSYSEIGGLSE 140
Query: 219 QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSG 278
QI+E++EVIELP+ +PELF +GI PKG LLYGPPGTGKTLLARAVA +C F++V
Sbjct: 141 QIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVS 200
Query: 279 SELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIF 338
S +V K+IGE +R++RE+F A R+H P IIF
Sbjct: 201 SSIVDKYIGESARLIREMFNYA-----------------------------RDHQPCIIF 231
Query: 339 MDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
MDEID+IG R G+ D E+QRT++ELLNQ+DGF+
Sbjct: 232 MDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDT 269
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 35/46 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA +C F++V S +V K+IGE +R++RE+F AR
Sbjct: 178 TGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYAR 223
>gi|322708524|gb|EFZ00101.1| proteasome regulatory particle subunit Rpt4 [Metarhizium anisopliae
ARSEF 23]
Length = 399
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 116/277 (41%), Positives = 166/277 (59%), Gaps = 29/277 (10%)
Query: 99 EKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFV 158
E E L+ L+ + +L + + ++ LQ G +GEV+K +D ++ +VK ++V
Sbjct: 23 EWEAKLKNLRLEIKDLQKEFDRTEDNIKALQSVGQIIGEVLKQLDDERFIVKASSGPRYV 82
Query: 159 VDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDN 218
V +D + RVAL + T+ ++LP +VDPLV M +E ++ +GGL++
Sbjct: 83 VGCRSKVDKEKLKQGTRVALDMTTLTIMRMLPREVDPLVYNMSLEDPGQVSFAGIGGLND 142
Query: 219 QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSG 278
QI+E++EVIELP+K+PELF +GI PKGVLLYGPPGTGKTLLARAVA E F++V
Sbjct: 143 QIRELREVIELPLKNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAVASSLETNFLKVVS 202
Query: 279 SELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIF 338
S +V K+IGE +R++RE+F A +EH P IIF
Sbjct: 203 SAIVDKYIGESARLIREMFGYA-----------------------------KEHEPCIIF 233
Query: 339 MDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
MDEID+IG R G+ D E+QRT++ELLNQLDGF+
Sbjct: 234 MDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFD 270
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 34/46 (73%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA E F++V S +V K+IGE +R++RE+F A+
Sbjct: 180 TGKTLLARAVASSLETNFLKVVSSAIVDKYIGESARLIREMFGYAK 225
>gi|448090374|ref|XP_004197054.1| Piso0_004290 [Millerozyma farinosa CBS 7064]
gi|448094777|ref|XP_004198085.1| Piso0_004290 [Millerozyma farinosa CBS 7064]
gi|359378476|emb|CCE84735.1| Piso0_004290 [Millerozyma farinosa CBS 7064]
gi|359379507|emb|CCE83704.1| Piso0_004290 [Millerozyma farinosa CBS 7064]
Length = 447
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 113/232 (48%), Positives = 148/232 (63%), Gaps = 29/232 (12%)
Query: 144 KKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVE 203
K K ++ + KFVV + + + D+ RV + + Y + LP ++DP V++M VE
Sbjct: 122 KSKYVINIKQIAKFVVGLGERVSPTDIEEGMRVGVDRQKYEIQLPLPPRIDPSVTMMTVE 181
Query: 204 KVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLAR 263
+ PD TY VGG +QI +++EV+ELP+ PE F LGI PKG+LLYGPPGTGKTL AR
Sbjct: 182 EKPDVTYSDVGGCKDQIDKLREVVELPLLSPERFVKLGIDPPKGILLYGPPGTGKTLCAR 241
Query: 264 AVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTN 323
AVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 242 AVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKK------------------- 282
Query: 324 TIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C IIF DE+D+IG +R + G+GGD+EVQRTMLEL+ QLDGF+
Sbjct: 283 --AC--------IIFFDEVDAIGGARFDDGAGGDNEVQRTMLELITQLDGFD 324
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 234 TGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTK 281
>gi|190348537|gb|EDK41003.2| hypothetical protein PGUG_05101 [Meyerozyma guilliermondii ATCC
6260]
Length = 522
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 110/254 (43%), Positives = 163/254 (64%), Gaps = 29/254 (11%)
Query: 122 REELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNE 181
RE++ L+ +G + + +D +V ++ V I +D + P+C V L ++
Sbjct: 178 REKVDDLRGYPMSIGTLEEIIDDDHAIVSSTAGSEYYVSIMSFVDKGLLEPSCSVLLHHK 237
Query: 182 SYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALG 241
+ ++ +L + DP+VS+M ++K P +Y +GGL+ QI+EIKE +ELP+ HPEL++ +G
Sbjct: 238 TVSIVGVLQDDADPMVSVMKLDKSPTESYADIGGLEAQIQEIKESVELPLTHPELYEEMG 297
Query: 242 IAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAS 301
I PKGV+LYG PGTGKTLLA+AVA+ T TF+R+ GSEL+QK++G+G R+ R++F +A+
Sbjct: 298 IKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPRLCRQIFQIAA 357
Query: 302 LKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQ 361
EHAPSI+F+DEID+IGS R ES SGG+ E+Q
Sbjct: 358 -----------------------------EHAPSIVFIDEIDAIGSKRYESSSGGEREIQ 388
Query: 362 RTMLELLNQLDGFE 375
RTMLELLNQLDGF+
Sbjct: 389 RTMLELLNQLDGFD 402
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 38/45 (84%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+R+ GSEL+QK++G+G R+ R++F +A
Sbjct: 312 TGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPRLCRQIFQIA 356
>gi|452988255|gb|EME88010.1| hypothetical protein MYCFIDRAFT_62636 [Pseudocercospora fijiensis
CIRAD86]
Length = 439
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 115/237 (48%), Positives = 148/237 (62%), Gaps = 29/237 (12%)
Query: 140 KPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSL 199
K +K K ++ V KFVV++ + D+ RV + Y + LP K+DP V++
Sbjct: 110 KDSEKSKYVINVKQIAKFVVNLGDRVSPTDIEEGMRVGVDRNKYQIMLPLPPKIDPSVTM 169
Query: 200 MMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKT 259
M VE PD TY VGG QI++++EV+E+P+ PE F LGI PKG LLYGPPGTGKT
Sbjct: 170 MTVEDKPDVTYGDVGGCKEQIEKLREVVEMPLLSPERFVNLGIDPPKGALLYGPPGTGKT 229
Query: 260 LLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLT 319
L ARAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 230 LCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKK--------------- 274
Query: 320 ILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
C IIF DEID++G +R + G+GGD+EVQRTMLEL+ QLDGF++
Sbjct: 275 ------AC--------IIFFDEIDAVGGARFDDGAGGDNEVQRTMLELITQLDGFDS 317
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 226 TGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTK 273
>gi|145255749|ref|XP_001399076.1| 26S protease subunit rpt4 [Aspergillus niger CBS 513.88]
gi|134084670|emb|CAK43348.1| unnamed protein product [Aspergillus niger]
gi|350630839|gb|EHA19211.1| hypothetical protein ASPNIDRAFT_212230 [Aspergillus niger ATCC
1015]
gi|358373476|dbj|GAA90074.1| 26S protease regulatory subunit S10B [Aspergillus kawachii IFO
4308]
Length = 393
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 117/277 (42%), Positives = 165/277 (59%), Gaps = 29/277 (10%)
Query: 99 EKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFV 158
E E L+ L+ +L + + E ++ LQ G +GEV+K +D+++ +VK ++V
Sbjct: 25 EWEAKLKSLRMGIKDLQREFDISEENIKALQSVGQIIGEVLKQLDEERFIVKASSGPRYV 84
Query: 159 VDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDN 218
V +D + RVAL + T+ ++LP +VDPLV M +E + +GGL+
Sbjct: 85 VGCRSKVDKAKLKQGTRVALDMTTLTIMRMLPREVDPLVYNMSLEDPGQINFAGIGGLNE 144
Query: 219 QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSG 278
QI+E++EVIELP+K+PELF +GI PKGVLLYGPPGTGKTLLARAVA E F++V
Sbjct: 145 QIRELREVIELPLKNPELFQRVGIKPPKGVLLYGPPGTGKTLLARAVASSMETNFLKVVS 204
Query: 279 SELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIF 338
S +V K+IGE +R++RE+F A +EH P IIF
Sbjct: 205 SAIVDKYIGESARLIREMFGYA-----------------------------KEHEPCIIF 235
Query: 339 MDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
MDEID+IG R G+ D E+QRT++ELLNQLDGF+
Sbjct: 236 MDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFD 272
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 34/46 (73%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA E F++V S +V K+IGE +R++RE+F A+
Sbjct: 182 TGKTLLARAVASSMETNFLKVVSSAIVDKYIGESARLIREMFGYAK 227
>gi|146414351|ref|XP_001483146.1| hypothetical protein PGUG_05101 [Meyerozyma guilliermondii ATCC
6260]
Length = 522
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 110/254 (43%), Positives = 163/254 (64%), Gaps = 29/254 (11%)
Query: 122 REELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNE 181
RE++ L+ +G + + +D +V ++ V I +D + P+C V L ++
Sbjct: 178 REKVDDLRGYPMSIGTLEEIIDDDHAIVSSTAGSEYYVSIMSFVDKGLLEPSCSVLLHHK 237
Query: 182 SYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALG 241
+ ++ +L + DP+VS+M ++K P +Y +GGL+ QI+EIKE +ELP+ HPEL++ +G
Sbjct: 238 TVSIVGVLQDDADPMVSVMKLDKSPTESYADIGGLEAQIQEIKESVELPLTHPELYEEMG 297
Query: 242 IAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAS 301
I PKGV+LYG PGTGKTLLA+AVA+ T TF+R+ GSEL+QK++G+G R+ R++F +A+
Sbjct: 298 IKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPRLCRQIFQIAA 357
Query: 302 LKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQ 361
EHAPSI+F+DEID+IGS R ES SGG+ E+Q
Sbjct: 358 -----------------------------EHAPSIVFIDEIDAIGSKRYESSSGGEREIQ 388
Query: 362 RTMLELLNQLDGFE 375
RTMLELLNQLDGF+
Sbjct: 389 RTMLELLNQLDGFD 402
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 38/45 (84%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+R+ GSEL+QK++G+G R+ R++F +A
Sbjct: 312 TGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPRLCRQIFQIA 356
>gi|63054416|ref|NP_587809.2| 19S proteasome regulatory subunit Rpt4 (predicted)
[Schizosaccharomyces pombe 972h-]
gi|46397658|sp|O74445.2|PRS10_SCHPO RecName: Full=Probable 26S protease subunit rpt4
gi|157310490|emb|CAA20682.2| 19S proteasome regulatory subunit Rpt4 (predicted)
[Schizosaccharomyces pombe]
Length = 388
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 116/277 (41%), Positives = 167/277 (60%), Gaps = 29/277 (10%)
Query: 99 EKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFV 158
E + L+ L+ +L K ++++ LQ G +GEV+K +D ++ +VK ++V
Sbjct: 20 EWDSKLKDLRFGNRDLVKKYDKTEDDIKSLQSVGQIIGEVLKQLDSERFIVKASSGPRYV 79
Query: 159 VDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDN 218
V N+D + + RV+L + T+ +ILP +VDPLV M +E D ++ VGGL+
Sbjct: 80 VGCRNNVDQSHLVQGVRVSLDMTTLTIMRILPREVDPLVYNMSIEDPGDISFAGVGGLNE 139
Query: 219 QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSG 278
QI+E++EVIELP+K+PELF +GI PKGVLLYGPPGTGKTLLARAVA F++V
Sbjct: 140 QIRELREVIELPLKNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAVAASLGVNFLKVVS 199
Query: 279 SELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIF 338
S +V K+IGE +R++RE+F A +EH P +IF
Sbjct: 200 SAIVDKYIGESARIIREMFGYA-----------------------------KEHEPCVIF 230
Query: 339 MDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
MDEID+IG R G+ D E+QRT++ELLNQ+DGF+
Sbjct: 231 MDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFD 267
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 33/46 (71%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA F++V S +V K+IGE +R++RE+F A+
Sbjct: 177 TGKTLLARAVAASLGVNFLKVVSSAIVDKYIGESARIIREMFGYAK 222
>gi|240279220|gb|EER42725.1| proteasome regulatory particle subunit Rpt4 [Ajellomyces capsulatus
H143]
Length = 371
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 122/299 (40%), Positives = 174/299 (58%), Gaps = 32/299 (10%)
Query: 80 EGFKPYYVTKIEELQ---LIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVG 136
EG P +EE + L E E L+ L+ +L + + ++ LQ G +G
Sbjct: 2 EGVDPEREQALEEYKKSLLESREWEAKLKDLRLGIKDLQKEFDTTEDNIKALQSVGQIIG 61
Query: 137 EVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPL 196
EV+K +D+++ +VK ++VV +D + RVAL + T+ ++LP +VDPL
Sbjct: 62 EVLKQLDEERFIVKASSGPRYVVGCRSKVDKAKLKQGTRVALDMTTLTIMRMLPREVDPL 121
Query: 197 VSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGT 256
V M +E ++ +GGL++QI+E++EVIELP+K+PELF +GI PKGVLLYGPPGT
Sbjct: 122 VYNMSLEDPGQVSFAGIGGLNDQIRELREVIELPLKNPELFLRVGIKPPKGVLLYGPPGT 181
Query: 257 GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWS 316
GKTLLARAVA E F++V S +V K+IGE +R++RE+F A
Sbjct: 182 GKTLLARAVASSLETNFLKVVSSAIVDKYIGESARLIREMFGYA---------------- 225
Query: 317 LLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
+EH P IIFMDEID+IG R G+ D E+QRT++ELLNQLDGF+
Sbjct: 226 -------------KEHEPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFD 271
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 34/46 (73%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA E F++V S +V K+IGE +R++RE+F A+
Sbjct: 181 TGKTLLARAVASSLETNFLKVVSSAIVDKYIGESARLIREMFGYAK 226
>gi|156547510|ref|XP_001603936.1| PREDICTED: 26S protease regulatory subunit 10B [Nasonia
vitripennis]
Length = 393
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 117/278 (42%), Positives = 163/278 (58%), Gaps = 29/278 (10%)
Query: 99 EKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFV 158
E E L+ ++ +L + +L+ LQ G VGEV+K + ++K +VK ++V
Sbjct: 25 EVESRLKEMRDHLKDLTKQYDKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYV 84
Query: 159 VDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDN 218
V + +D N + RVAL + T+ + LP +VDPLV M E D TY +GGL
Sbjct: 85 VGCRRQLDKNKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDVTYSEIGGLSE 144
Query: 219 QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSG 278
QI+E++EVIELP+ +PELF +GI PKG LLYGPPGTGKTLLARAVA + F++V
Sbjct: 145 QIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVS 204
Query: 279 SELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIF 338
S +V K+IGE +R++RE+F A R+H P IIF
Sbjct: 205 SAIVDKYIGESARLIREMFNYA-----------------------------RDHQPCIIF 235
Query: 339 MDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
MDEID+IG R G+ D E+QRT++ELLNQ+DGF++
Sbjct: 236 MDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDS 273
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 34/46 (73%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA + F++V S +V K+IGE +R++RE+F AR
Sbjct: 182 TGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYAR 227
>gi|322697972|gb|EFY89746.1| proteasome regulatory particle subunit Rpt4 [Metarhizium acridum
CQMa 102]
Length = 391
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 116/277 (41%), Positives = 166/277 (59%), Gaps = 29/277 (10%)
Query: 99 EKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFV 158
E E L+ L+ + +L + + ++ LQ G +GEV+K +D ++ +VK ++V
Sbjct: 23 EWEAKLKNLRLEIKDLQKEFDRTEDNIKALQSVGQIIGEVLKQLDDERFIVKASSGPRYV 82
Query: 159 VDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDN 218
V +D + RVAL + T+ ++LP +VDPLV M +E ++ +GGL++
Sbjct: 83 VGCRSKVDKEKLKQGTRVALDMTTLTIMRMLPREVDPLVYNMSLEDPGQVSFAGIGGLND 142
Query: 219 QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSG 278
QI+E++EVIELP+K+PELF +GI PKGVLLYGPPGTGKTLLARAVA E F++V
Sbjct: 143 QIRELREVIELPLKNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAVASSLETNFLKVVS 202
Query: 279 SELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIF 338
S +V K+IGE +R++RE+F A +EH P IIF
Sbjct: 203 SAIVDKYIGESARLIREMFGYA-----------------------------KEHEPCIIF 233
Query: 339 MDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
MDEID+IG R G+ D E+QRT++ELLNQLDGF+
Sbjct: 234 MDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFD 270
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 34/46 (73%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA E F++V S +V K+IGE +R++RE+F A+
Sbjct: 180 TGKTLLARAVASSLETNFLKVVSSAIVDKYIGESARLIREMFGYAK 225
>gi|389749707|gb|EIM90878.1| 26S proteasome subunit P45 [Stereum hirsutum FP-91666 SS1]
Length = 443
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 124/291 (42%), Positives = 180/291 (61%), Gaps = 38/291 (13%)
Query: 89 KIEELQLIVAEKEQNLRRL--QAQRNELNAKVRMLREELQLLQEQGS--YVGEVVKPMDK 144
+I++ L+ E N RL +A R E N + R ++L+ GS VG + + +D
Sbjct: 67 RIKDYLLLEEEFIVNQERLKPEANREEKNEEDRTKVDDLR-----GSPMAVGTMEEIIDD 121
Query: 145 KKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEK 204
++ +F V I +D + + P C+V L +++ + +L + DP+VS+M ++K
Sbjct: 122 DHAIISTASGPEFYVSIMSFVDKDLLEPGCQVLLHHKTQAIVGVLQDDADPMVSVMKLDK 181
Query: 205 VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 264
P +Y VGGL+ QI+EIKE +ELP+ HPEL++ +GI PKGV+LYG PGTGKTLLA+A
Sbjct: 182 APTESYADVGGLEQQIQEIKESVELPLTHPELYEEMGIRPPKGVILYGVPGTGKTLLAKA 241
Query: 265 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNT 324
VA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 242 VANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAE----------------------- 278
Query: 325 IVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
EHAPSI+F+DEID+IG+ R +S SGG+ E+QRTMLELLNQLDGF+
Sbjct: 279 ------EHAPSIVFIDEIDAIGTKRYDSTSGGEREIQRTMLELLNQLDGFD 323
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 233 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 277
>gi|392578373|gb|EIW71501.1| hypothetical protein TREMEDRAFT_42877 [Tremella mesenterica DSM
1558]
Length = 456
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 116/231 (50%), Positives = 147/231 (63%), Gaps = 29/231 (12%)
Query: 146 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
+ ++ + KFVV + + DV RV + +Y + LP K+D V++M VE+
Sbjct: 133 RYVISIKQVAKFVVGLGDRVAPTDVEEGMRVGVDRTNYKILIPLPPKIDASVTMMQVEER 192
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
P TY VGG QI++++EV+ELP+ PE F LGI PKGVLLYGPPGTGKTL ARAV
Sbjct: 193 PSVTYADVGGCKEQIEKLREVVELPLLEPERFANLGIEPPKGVLLYGPPGTGKTLCARAV 252
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTI 325
A+ T+CTFIRV GSELVQK+IGEG+RMVRELF MA KK
Sbjct: 253 ANRTDCTFIRVIGSELVQKYIGEGARMVRELFEMARSKK--------------------- 291
Query: 326 VCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
C IIF DE+D+IG +R + G+GGD+EVQRTMLEL+NQLDGF+A
Sbjct: 292 AC--------IIFFDEVDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDA 334
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/48 (79%), Positives = 43/48 (89%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+CTFIRV GSELVQK+IGEG+RMVRELF MAR K
Sbjct: 243 TGKTLCARAVANRTDCTFIRVIGSELVQKYIGEGARMVRELFEMARSK 290
>gi|384247286|gb|EIE20773.1| 26S proteasome subunit P45 [Coccomyxa subellipsoidea C-169]
Length = 367
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 125/278 (44%), Positives = 175/278 (62%), Gaps = 41/278 (14%)
Query: 103 NLRRLQAQRNELNAKVRMLREELQLLQEQGS--YVGEVVKPMDKKKVLVK--VHPEGKFV 158
N RL+ Q E N + R +EL+ GS VG + + +D+ +V V PE +
Sbjct: 8 NQERLKPQ-EERNEEERTKVDELR-----GSPMSVGSLEEIIDENHAIVSSLVGPE--YY 59
Query: 159 VDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDN 218
V+I +D + P C + L N+ ++ IL ++ DP+VS+M VEK P +Y VGGL+
Sbjct: 60 VNIMSFVDKGQLEPGCSILLHNKVLSVVGILQDEADPMVSVMKVEKAPLESYADVGGLEQ 119
Query: 219 QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSG 278
Q++EIKE +ELP+ HPEL++ +GI PKGV+LYG PGTGKTLLA+AVA+ T TF+RV G
Sbjct: 120 QVQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVG 179
Query: 279 SELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIF 338
SEL+QK++G+G ++VRELF +A E APSI+F
Sbjct: 180 SELIQKYLGDGPKLVRELFRVAD-----------------------------ELAPSIVF 210
Query: 339 MDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
+DE+D+IG+ R ES SGG+ E+QRTMLELLNQ+DGF+A
Sbjct: 211 IDEVDAIGAKRYESQSGGEREIQRTMLELLNQMDGFDA 248
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 157 TGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 201
>gi|337285121|ref|YP_004624595.1| proteasome-activating nucleotidase [Pyrococcus yayanosii CH1]
gi|334901055|gb|AEH25323.1| proteasome-activating nucleotidase [Pyrococcus yayanosii CH1]
Length = 396
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 117/294 (39%), Positives = 180/294 (61%), Gaps = 29/294 (9%)
Query: 82 FKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKP 141
F+ Y I L+ + + E +R L+A + L ++ LR E+ L++ ++ G V++
Sbjct: 8 FEGGYDDYITYLKRRIRQLELQVRMLEADKERLERELSRLRTEMSRLRQPPAFAGTVIEL 67
Query: 142 MDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMM 201
+D + +V+ + +FVV I ++ + P RVAL + + +ILP+ DP V
Sbjct: 68 LDDDRAIVQNYNGPRFVVRIAPWVEKEKLRPGSRVALDQRTMAIIEILPSPKDPAVLGFE 127
Query: 202 VEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLL 261
V + P+ TY+ +GGL Q++E++E IELP+KHPELF+ +GI PKGVLLYGPPG GKTL+
Sbjct: 128 VIERPNVTYKDIGGLKKQLQELREAIELPLKHPELFEEVGIEPPKGVLLYGPPGCGKTLM 187
Query: 262 ARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTIL 321
A+A+AH TFI V GSELV+K+IGEG+R+V ELF +A
Sbjct: 188 AKALAHEVNATFIHVVGSELVRKYIGEGARLVHELFELA--------------------- 226
Query: 322 TNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
+E AP+IIF+DEID+IG+ R++ +GG+ EV RT+++LL ++DGF+
Sbjct: 227 --------KEKAPTIIFIDEIDAIGAKRMDETTGGEREVNRTLMQLLAEMDGFD 272
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 39/50 (78%)
Query: 13 GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
GKTL+A+A+AH TFI V GSELV+K+IGEG+R+V ELF +A+ K +
Sbjct: 183 GKTLMAKALAHEVNATFIHVVGSELVRKYIGEGARLVHELFELAKEKAPT 232
>gi|429217454|ref|YP_007175444.1| 26S proteasome subunit P45 family [Caldisphaera lagunensis DSM
15908]
gi|429133983|gb|AFZ70995.1| 26S proteasome subunit P45 family [Caldisphaera lagunensis DSM
15908]
Length = 392
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 120/275 (43%), Positives = 163/275 (59%), Gaps = 29/275 (10%)
Query: 101 EQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVD 160
++ +R L + L + R+E+ L E +++ ++ + +VK VV
Sbjct: 27 KERIRYLTQMKISLERDLEYYRQEMTKLLEPPYIEAMLLEVLNDGRAIVKSSTGPNLVVK 86
Query: 161 IDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQI 220
I NID + P VAL N+ T+ ++LPN DP V M +E P T++ VGGL NQI
Sbjct: 87 ISNNIDNTKLRPGISVALNNKGSTIVEVLPNIYDPFVEAMEIEDNPGFTFKDVGGLQNQI 146
Query: 221 KEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSE 280
+EI EV+ LP+ PELF +LGI PKGVLLYGPPGTGKTLLAR++A + TFIRV S+
Sbjct: 147 REIYEVVGLPIVKPELFKSLGIDPPKGVLLYGPPGTGKTLLARSLAGEVKATFIRVVASQ 206
Query: 281 LVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMD 340
V KFIGEG+R+VRE+F +A RE P+IIF+D
Sbjct: 207 FVNKFIGEGARIVREVFKLA-----------------------------REKKPTIIFID 237
Query: 341 EIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
E+D+IGS RIE G+ GD EVQRTML+LL ++DGF+
Sbjct: 238 ELDAIGSRRIEMGTSGDREVQRTMLQLLAEIDGFD 272
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 38/48 (79%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTLLAR++A + TFIRV S+ V KFIGEG+R+VRE+F +AR K
Sbjct: 182 TGKTLLARSLAGEVKATFIRVVASQFVNKFIGEGARIVREVFKLAREK 229
>gi|237834291|ref|XP_002366443.1| 26S proteasome regulatory ATPase subunit, putative [Toxoplasma
gondii ME49]
gi|211964107|gb|EEA99302.1| 26S proteasome regulatory ATPase subunit, putative [Toxoplasma
gondii ME49]
Length = 398
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 119/290 (41%), Positives = 172/290 (59%), Gaps = 33/290 (11%)
Query: 86 YVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKK 145
YV K++E + E E +++L+ + + + + ++L+ LQ G +GEV+K +D +
Sbjct: 22 YVAKVKEHR----ECEAKVKKLREEVKKQSGRYEKTEDDLKALQGVGQLIGEVLKQLDSE 77
Query: 146 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
K +VK+ +++V ID +T RVAL + T+ + L +VDPLV M+ E
Sbjct: 78 KFIVKMSSGPRYMVGSKPKIDKASLTAGTRVALDMTTLTVMRKLQREVDPLVFNMLHEDP 137
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
Y VGGL QI++++EVIELP+ +PELF +GI PKGVLLYGPPGTGKTLLARA+
Sbjct: 138 GSVQYGEVGGLSEQIRQMREVIELPLTNPELFKRVGIKTPKGVLLYGPPGTGKTLLARAM 197
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTI 325
A + C F++V S +V K+IGE +R++RE+F A
Sbjct: 198 ASNMNCNFMKVVASAIVDKYIGESARVIREMFAYA------------------------- 232
Query: 326 VCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
R+H P IIFMDEID+IG R G+ D E+QRT++ELLNQLDGF+
Sbjct: 233 ----RDHEPCIIFMDEIDAIGGRRFSQGTSADREIQRTLMELLNQLDGFD 278
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 35/46 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARA+A + C F++V S +V K+IGE +R++RE+F AR
Sbjct: 188 TGKTLLARAMASNMNCNFMKVVASAIVDKYIGESARVIREMFAYAR 233
>gi|409048857|gb|EKM58335.1| hypothetical protein PHACADRAFT_252589 [Phanerochaete carnosa
HHB-10118-sp]
Length = 498
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 115/288 (39%), Positives = 178/288 (61%), Gaps = 30/288 (10%)
Query: 89 KIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVL 148
+I++ L+ E N RL+ + + K R ++ L+ VG + + +D +
Sbjct: 81 RIKDYMLLEEEYISNQERLKPEAAPQD-KSEEDRSKVDDLRGTPMAVGTLEEIIDDDHAI 139
Query: 149 VKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDS 208
+ ++ V I +D + + P+C V L ++++ + +L + DP+V++M ++K P
Sbjct: 140 ISTASGPEYYVSIMSFVDKDQLEPSCTVLLHHKTHAVIGVLKDDTDPMVNVMKLDKAPTE 199
Query: 209 TYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH 268
+Y +GGL+ QI+EIKE +ELP+ HPEL++ +GI PKGV+LYG PGTGKTLLA+AVA+
Sbjct: 200 SYADIGGLEQQIQEIKEAVELPLTHPELYEEMGIKPPKGVILYGVPGTGKTLLAKAVANQ 259
Query: 269 TECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCN 328
T TF+R+ GSEL+QK++G+G ++VRELF +A
Sbjct: 260 TSATFLRIVGSELIQKYLGDGPKLVRELFRVAE--------------------------- 292
Query: 329 FREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
EHAPSI+F+DEID+IG+ R +S SGG+ E+QRTMLELLNQLDGF++
Sbjct: 293 --EHAPSIVFIDEIDAIGTKRYDSTSGGEREIQRTMLELLNQLDGFDS 338
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+R+ GSEL+QK++G+G ++VRELF +A
Sbjct: 247 TGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPKLVRELFRVA 291
>gi|358055784|dbj|GAA98129.1| hypothetical protein E5Q_04812 [Mixia osmundae IAM 14324]
Length = 456
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 113/231 (48%), Positives = 147/231 (63%), Gaps = 29/231 (12%)
Query: 146 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
K ++ + KFVV + + D+ RV + + Y + LP ++DP V++M VE+
Sbjct: 133 KYVIDIKQIAKFVVALGDKVSPTDIEEGMRVGVTRDKYQIQIPLPPRIDPSVTMMQVEEK 192
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
PD TY VGG QI++++EV+E P+ PE F LGI PKGVLL+GPPGTGKTL ARAV
Sbjct: 193 PDVTYADVGGCKEQIEKLREVVETPLLSPEKFVTLGIDPPKGVLLFGPPGTGKTLCARAV 252
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTI 325
A+ T+ TFIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 253 ANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKK--------------------- 291
Query: 326 VCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
C IIF DE+D+IG +R + G+GGD+EVQRTMLEL+NQLDGF+A
Sbjct: 292 AC--------IIFFDEVDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDA 334
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 243 TGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTK 290
>gi|344228475|gb|EGV60361.1| 26S proteasome subunit P45 [Candida tenuis ATCC 10573]
Length = 446
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 112/233 (48%), Positives = 149/233 (63%), Gaps = 29/233 (12%)
Query: 143 DKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMV 202
+K K ++ + KFVV + + + D+ RV + + Y + LP ++DP V++M V
Sbjct: 120 NKSKYVINIKQIAKFVVGLGERVSPTDIEEGMRVGVDRQKYEIQLPLPPRIDPSVTMMTV 179
Query: 203 EKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 262
E+ PD TY +GG QI++++EV+ELP+ PE F LGI PKG+LLYGPPGTGKTL A
Sbjct: 180 EEKPDVTYSDIGGCKEQIEKLREVVELPLLSPERFVKLGIDPPKGILLYGPPGTGKTLCA 239
Query: 263 RAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILT 322
RAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 240 RAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKK------------------ 281
Query: 323 NTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C IIF DE+D+IG +R + G+GGD+EVQRTMLEL+ QLDGF+
Sbjct: 282 ---AC--------IIFFDEVDAIGGARFDDGAGGDNEVQRTMLELITQLDGFD 323
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 233 TGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTK 280
>gi|134113783|ref|XP_774476.1| hypothetical protein CNBG1220 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257114|gb|EAL19829.1| hypothetical protein CNBG1220 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 450
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 128/281 (45%), Positives = 167/281 (59%), Gaps = 34/281 (12%)
Query: 96 IVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQ-GSYVGEVVKPMDKKKVLVKVHPE 154
I A+K+++ R LQ R + K Q L Q G+ G + + ++ +
Sbjct: 80 IPADKQRSGRPLQVARCQTIIKAANPPSGDQPLNPQDGAGAGNP----EGDRYVISIKQV 135
Query: 155 GKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVG 214
KFVV + + DV RV + +Y + LP K+DP V++M VE+ P TY VG
Sbjct: 136 AKFVVGLGDEVSPTDVEEGMRVGVDQVTYKIMLPLPPKIDPSVTMMQVEERPSITYADVG 195
Query: 215 GLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFI 274
G QI++++EV+ELP+ PE F +LGI PKGVLLYGPPGTGKTL ARAVA+ T+ TFI
Sbjct: 196 GCKEQIEKLREVVELPLLEPERFVSLGIEPPKGVLLYGPPGTGKTLCARAVANRTDSTFI 255
Query: 275 RVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAP 334
RV GSELVQK+IGEG+RMVRELF MA KK C
Sbjct: 256 RVIGSELVQKYIGEGARMVRELFEMARSKK---------------------AC------- 287
Query: 335 SIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
IIF DE+D+IG +R + G+GGD+EVQRTMLEL+NQLDGF+
Sbjct: 288 -IIFFDEVDAIGGARFDDGAGGDNEVQRTMLELINQLDGFD 327
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 37/48 (77%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ TFIRV GSELVQK+IGEG+RMVRELF MAR K
Sbjct: 237 TGKTLCARAVANRTDSTFIRVIGSELVQKYIGEGARMVRELFEMARSK 284
>gi|366994610|ref|XP_003677069.1| hypothetical protein NCAS_0F02300 [Naumovozyma castellii CBS 4309]
gi|342302937|emb|CCC70714.1| hypothetical protein NCAS_0F02300 [Naumovozyma castellii CBS 4309]
Length = 474
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 113/230 (49%), Positives = 147/230 (63%), Gaps = 29/230 (12%)
Query: 146 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
K ++ + KFVV + + + D+ RV + Y + LP ++DP V++M VE+
Sbjct: 151 KYVINLKQIAKFVVGLGERVSPTDIEEGMRVGVDRSKYNIELPLPPRIDPSVTMMTVEEK 210
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
PD TY VGG +QI++++EV+ELP+ PE F LGI PKG+LLYGPPGTGKTL ARAV
Sbjct: 211 PDVTYSDVGGCKDQIEKLREVVELPLLSPERFATLGIDPPKGILLYGPPGTGKTLCARAV 270
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTI 325
A+ T+ TFIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 271 ANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKK--------------------- 309
Query: 326 VCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C IIF DEID+IG +R + G+GGD+EVQRTMLEL+ QLDGF+
Sbjct: 310 AC--------IIFFDEIDAIGGARFDDGAGGDNEVQRTMLELITQLDGFD 351
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 261 TGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTK 308
>gi|294911849|ref|XP_002778080.1| 26S protease regulatory subunit, putative [Perkinsus marinus ATCC
50983]
gi|294942220|ref|XP_002783436.1| 26S protease regulatory subunit, putative [Perkinsus marinus ATCC
50983]
gi|239886201|gb|EER09875.1| 26S protease regulatory subunit, putative [Perkinsus marinus ATCC
50983]
gi|239895891|gb|EER15232.1| 26S protease regulatory subunit, putative [Perkinsus marinus ATCC
50983]
Length = 446
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 111/243 (45%), Positives = 159/243 (65%), Gaps = 29/243 (11%)
Query: 135 VGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVD 194
VG + + +D +V +F V+I +D + + P V L N+S ++ IL + VD
Sbjct: 115 VGNLEELIDDSHAIVSTSNGPEFYVNILSIVDQDQLEPGSSVLLHNKSMSIVGILADDVD 174
Query: 195 PLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPP 254
PLVS+M V+K P +Y +GGL+ QI+EIKE +ELP+ HPEL++ +GI PKGV+LYG P
Sbjct: 175 PLVSVMKVDKAPLESYSDIGGLEQQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGAP 234
Query: 255 GTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLF 314
GTGKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRE+F +A+
Sbjct: 235 GTGKTLLAKAVANETSATFLRVVGSELIQKYLGDGPKLVREMFRVAN------------- 281
Query: 315 WSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGF 374
E APSI+F+DEID++G+ R ++ SGG+ E+QRTMLELLNQLDGF
Sbjct: 282 ----------------EQAPSIVFIDEIDAVGTKRYDTTSGGEREIQRTMLELLNQLDGF 325
Query: 375 EAT 377
+ +
Sbjct: 326 DQS 328
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 41/51 (80%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRE+F +A + S
Sbjct: 236 TGKTLLAKAVANETSATFLRVVGSELIQKYLGDGPKLVREMFRVANEQAPS 286
>gi|167392334|ref|XP_001740108.1| 26S protease regulatory subunit [Entamoeba dispar SAW760]
gi|165895900|gb|EDR23483.1| 26S protease regulatory subunit, putative [Entamoeba dispar SAW760]
Length = 417
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 121/258 (46%), Positives = 159/258 (61%), Gaps = 33/258 (12%)
Query: 121 LREELQLLQEQGSYVGEVVKPMDKKK---VLVKVHPEGKFVVDIDKNIDINDVTPNCRVA 177
L + +L++EQ V +K M ++ ++ + +FVV ++ N V RV
Sbjct: 67 LNADKKLMEEQPLLVCRCIKAMPDEREPRYVISIKEFARFVVGKSNRVEKNAVQDGTRVG 126
Query: 178 LRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELF 237
+ Y + LP K+DP VS+M VE+ PD TY+ +GG QI+ IKEV+ELP+ HPE F
Sbjct: 127 VDRARYEIKMALPPKIDPSVSVMQVEEKPDVTYKDIGGCKEQIERIKEVVELPMLHPEAF 186
Query: 238 DALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 297
+ LGI PKGVLLYGPPGTGKTLLARAVA+ TE TF+RV GSELVQK++GEG++MVR+LF
Sbjct: 187 ENLGIDPPKGVLLYGPPGTGKTLLARAVANRTESTFVRVIGSELVQKYVGEGAKMVRDLF 246
Query: 298 VMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGD 357
MA KK IIF DEID+IG +R + + G+
Sbjct: 247 DMAKSKK-----------------------------SCIIFFDEIDAIGGTRFQDDT-GE 276
Query: 358 SEVQRTMLELLNQLDGFE 375
SEVQRTMLEL+NQLDGF+
Sbjct: 277 SEVQRTMLELINQLDGFD 294
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/50 (70%), Positives = 44/50 (88%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGS 61
+GKTLLARAVA+ TE TF+RV GSELVQK++GEG++MVR+LF MA+ K S
Sbjct: 205 TGKTLLARAVANRTESTFVRVIGSELVQKYVGEGAKMVRDLFDMAKSKKS 254
>gi|363756268|ref|XP_003648350.1| hypothetical protein Ecym_8250 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891550|gb|AET41533.1| Hypothetical protein Ecym_8250 [Eremothecium cymbalariae
DBVPG#7215]
Length = 456
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 113/230 (49%), Positives = 147/230 (63%), Gaps = 29/230 (12%)
Query: 146 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
K ++ + KFVV + + + D+ RV + Y + LP ++DP V++M VE+
Sbjct: 133 KYVINLKQIAKFVVGLGERVSPTDIEEGMRVGVDRSKYFIELPLPPRIDPSVTMMTVEEK 192
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
PD TY VGG QI++++EV+ELP+ PE F ALGI PKG+LLYGPPGTGKTL ARAV
Sbjct: 193 PDVTYSDVGGCKEQIEKLREVVELPLLSPERFAALGIDPPKGILLYGPPGTGKTLCARAV 252
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTI 325
A+ T+ TFIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 253 ANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKK--------------------- 291
Query: 326 VCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C IIF DE+D+IG +R + G+GGD+EVQRTMLEL+ QLDGF+
Sbjct: 292 AC--------IIFFDEVDAIGGARFDDGAGGDNEVQRTMLELITQLDGFD 333
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 243 TGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTK 290
>gi|212546611|ref|XP_002153459.1| proteasome regulatory particle subunit Rpt1, putative [Talaromyces
marneffei ATCC 18224]
gi|210064979|gb|EEA19074.1| proteasome regulatory particle subunit Rpt1, putative [Talaromyces
marneffei ATCC 18224]
Length = 439
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 116/237 (48%), Positives = 149/237 (62%), Gaps = 29/237 (12%)
Query: 140 KPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSL 199
K +K K ++ V KFVV++ + + D+ RV + Y + LP K+DP V++
Sbjct: 110 KDPEKSKYVINVKQIAKFVVNLGERVSPTDIEEGMRVGVDRNKYQILLPLPPKIDPSVTM 169
Query: 200 MMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKT 259
M VE PD TY VGG QI++++EV+E+P+ PE F LGI PKG LLYGPPGTGKT
Sbjct: 170 MQVEDKPDVTYGDVGGSKEQIEKLREVVEMPLLSPERFVNLGIDPPKGALLYGPPGTGKT 229
Query: 260 LLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLT 319
L ARAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 230 LCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKK--------------- 274
Query: 320 ILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
C IIF DEID+IG +R + G+GGD+EVQRTMLEL+ QLDGF++
Sbjct: 275 ------AC--------IIFFDEIDAIGGARFDDGAGGDNEVQRTMLELITQLDGFDS 317
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 226 TGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTK 273
>gi|164424303|ref|XP_958860.2| hypothetical protein NCU07367 [Neurospora crassa OR74A]
gi|157070458|gb|EAA29624.2| hypothetical protein NCU07367 [Neurospora crassa OR74A]
gi|336464029|gb|EGO52269.1| hypothetical protein NEUTE1DRAFT_118706 [Neurospora tetrasperma
FGSC 2508]
gi|350296111|gb|EGZ77088.1| 26S proteasome subunit P45 [Neurospora tetrasperma FGSC 2509]
Length = 390
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 117/277 (42%), Positives = 165/277 (59%), Gaps = 29/277 (10%)
Query: 99 EKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFV 158
E E L+ L+ + L + E ++ LQ G +GEV+K +D ++ +VK ++V
Sbjct: 22 EWEAKLKNLRLELKGLQKEYDQTEENIKALQSVGQIIGEVLKQLDDERFIVKASSGPRYV 81
Query: 159 VDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDN 218
V +D + RVAL + T+ ++LP +VDPLV M +E ++ +GGL++
Sbjct: 82 VGCRSKVDKAKLKQGTRVALDMTTLTIMRMLPREVDPLVYNMSLEDPGQVSFGGIGGLND 141
Query: 219 QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSG 278
QI+E++EVIELP+K+PELF +GI PKGVLLYGPPGTGKTLLARAVA E F++V
Sbjct: 142 QIRELREVIELPLKNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAVASSLETNFLKVVS 201
Query: 279 SELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIF 338
S +V K+IGE +R++RE+F A +EH P IIF
Sbjct: 202 SAIVDKYIGESARLIREMFGYA-----------------------------KEHEPCIIF 232
Query: 339 MDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
MDEID+IG R G+ D E+QRT++ELLNQLDGF+
Sbjct: 233 MDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFD 269
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 34/46 (73%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA E F++V S +V K+IGE +R++RE+F A+
Sbjct: 179 TGKTLLARAVASSLETNFLKVVSSAIVDKYIGESARLIREMFGYAK 224
>gi|164663343|ref|XP_001732793.1| hypothetical protein MGL_0568 [Malassezia globosa CBS 7966]
gi|159106696|gb|EDP45579.1| hypothetical protein MGL_0568 [Malassezia globosa CBS 7966]
Length = 490
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 114/234 (48%), Positives = 148/234 (63%), Gaps = 29/234 (12%)
Query: 143 DKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMV 202
+K K ++ V KFVV + + DV RV + Y + LP K+DP V++M V
Sbjct: 164 NKDKYVINVKQIAKFVVALGDRVSPTDVEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMQV 223
Query: 203 EKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 262
E PD TY +GG+ +QI++++EV+E P+ PE F LGI PKGVLL+GPPGTGKTL A
Sbjct: 224 EDKPDVTYSDIGGVKDQIEKLREVVETPLLEPERFVKLGIDPPKGVLLFGPPGTGKTLCA 283
Query: 263 RAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILT 322
RAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF +A KK
Sbjct: 284 RAVANRTDATFIRVIGSELVQKYVGEGARMVRELFELARTKK------------------ 325
Query: 323 NTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
C IIF DE+D+IG R + G+GGD+EVQRTMLEL+NQLDGF++
Sbjct: 326 ---AC--------IIFFDEVDAIGGVRFDDGAGGDNEVQRTMLELINQLDGFDS 368
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF +AR K
Sbjct: 277 TGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFELARTK 324
>gi|225712344|gb|ACO12018.1| 26S protease regulatory subunit 4 [Lepeophtheirus salmonis]
Length = 438
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 114/277 (41%), Positives = 168/277 (60%), Gaps = 35/277 (12%)
Query: 100 KEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVV 159
+ Q + + Q ++NE R ++ L+ VG + + +D +V + V
Sbjct: 78 RNQEVLKPQEEKNEEE------RSKVDDLRGTPMSVGSLEEIIDDNHAIVSTSVGSEHYV 131
Query: 160 DIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQ 219
I +D + + P C V L + + + +L + DP+V++M +EK P TY +GGLD Q
Sbjct: 132 SILSFVDKDQLEPGCSVLLNHRVHAVVGVLGDDTDPMVTVMKLEKAPQETYADIGGLDQQ 191
Query: 220 IKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGS 279
I+EIKE +ELP+ HPE ++ +GI PKGV+LYGPPGTGKTLLA+AVA+ T TF+RV GS
Sbjct: 192 IQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGS 251
Query: 280 ELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFM 339
EL+QK++G+G ++VRELF +A EH+PSI+F+
Sbjct: 252 ELIQKYLGDGPKLVRELFRVAE-----------------------------EHSPSIVFI 282
Query: 340 DEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
DEID++G+ R +S GG+ E+QRTMLELLNQLDGF++
Sbjct: 283 DEIDAVGTKRYDSNCGGEREIQRTMLELLNQLDGFDS 319
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 228 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 272
>gi|6322704|ref|NP_012777.1| proteasome regulatory particle base subunit RPT1 [Saccharomyces
cerevisiae S288c]
gi|464862|sp|P33299.1|PRS7_YEAST RecName: Full=26S protease regulatory subunit 7 homolog; AltName:
Full=Protein CIM5; AltName: Full=Tat-binding homolog 3
gi|403071968|pdb|4B4T|H Chain H, Near-Atomic Resolution Structural Model Of The Yeast 26s
Proteasome
gi|313882|emb|CAA51973.1| YTA3 [Saccharomyces cerevisiae]
gi|410510|emb|CAA80470.1| putative ATPase [Saccharomyces cerevisiae]
gi|486249|emb|CAA81986.1| YTA3 [Saccharomyces cerevisiae]
gi|151941662|gb|EDN60024.1| ATPase [Saccharomyces cerevisiae YJM789]
gi|190409693|gb|EDV12958.1| 26S protease subunit component [Saccharomyces cerevisiae RM11-1a]
gi|256271083|gb|EEU06182.1| Rpt1p [Saccharomyces cerevisiae JAY291]
gi|285813120|tpg|DAA09017.1| TPA: proteasome regulatory particle base subunit RPT1
[Saccharomyces cerevisiae S288c]
gi|323332722|gb|EGA74127.1| Rpt1p [Saccharomyces cerevisiae AWRI796]
gi|349579424|dbj|GAA24586.1| K7_Rpt1p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392298293|gb|EIW09391.1| Rpt1p [Saccharomyces cerevisiae CEN.PK113-7D]
gi|738777|prf||2001430A 26S protease
Length = 467
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 112/230 (48%), Positives = 147/230 (63%), Gaps = 29/230 (12%)
Query: 146 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
K ++ + KFVV + + + D+ RV + Y + LP ++DP V++M VE+
Sbjct: 144 KYVINLKQIAKFVVGLGERVSPTDIEEGMRVGVDRSKYNIELPLPPRIDPSVTMMTVEEK 203
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
PD TY VGG +QI++++EV+ELP+ PE F LGI PKG+LLYGPPGTGKTL ARAV
Sbjct: 204 PDVTYSDVGGCKDQIEKLREVVELPLLSPERFATLGIDPPKGILLYGPPGTGKTLCARAV 263
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTI 325
A+ T+ TFIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 264 ANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKK--------------------- 302
Query: 326 VCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C IIF DEID++G +R + G+GGD+EVQRTMLEL+ QLDGF+
Sbjct: 303 AC--------IIFFDEIDAVGGARFDDGAGGDNEVQRTMLELITQLDGFD 344
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 254 TGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTK 301
>gi|221486668|gb|EEE24929.1| 26S proteasome regulatory ATPase subunit, putative [Toxoplasma
gondii GT1]
gi|221508425|gb|EEE34012.1| 26S proteasome regulatory ATPase subunit, putative [Toxoplasma
gondii VEG]
Length = 398
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 119/290 (41%), Positives = 171/290 (58%), Gaps = 33/290 (11%)
Query: 86 YVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKK 145
YV K++E + E E +++L+ + + + + ++L+ LQ G +GEV+K +D +
Sbjct: 22 YVAKVKEHR----ECEAKVKKLREEVKKQSGRYEKTEDDLKALQGVGQLIGEVLKQLDSE 77
Query: 146 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
K +VK +++V ID +T RVAL + T+ + L +VDPLV M+ E
Sbjct: 78 KFIVKTSSGPRYMVGSKPKIDKASLTAGTRVALDMTTLTVMRKLQREVDPLVFNMLHEDP 137
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
Y VGGL QI++++EVIELP+ +PELF +GI PKGVLLYGPPGTGKTLLARA+
Sbjct: 138 GSVQYGEVGGLSEQIRQMREVIELPLTNPELFKRVGIKTPKGVLLYGPPGTGKTLLARAM 197
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTI 325
A + C F++V S +V K+IGE +R++RE+F A
Sbjct: 198 ASNMNCNFMKVVASAIVDKYIGESARVIREMFAYA------------------------- 232
Query: 326 VCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
R+H P IIFMDEID+IG R G+ D E+QRT++ELLNQLDGF+
Sbjct: 233 ----RDHEPCIIFMDEIDAIGGRRFSQGTSADREIQRTLMELLNQLDGFD 278
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 35/46 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARA+A + C F++V S +V K+IGE +R++RE+F AR
Sbjct: 188 TGKTLLARAMASNMNCNFMKVVASAIVDKYIGESARVIREMFAYAR 233
>gi|294868638|ref|XP_002765620.1| 26S protease regulatory subunit, putative [Perkinsus marinus ATCC
50983]
gi|239865699|gb|EEQ98337.1| 26S protease regulatory subunit, putative [Perkinsus marinus ATCC
50983]
Length = 446
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 111/243 (45%), Positives = 159/243 (65%), Gaps = 29/243 (11%)
Query: 135 VGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVD 194
VG + + +D +V +F V+I +D + + P V L N+S ++ IL + VD
Sbjct: 115 VGNLEELIDDSHAIVSTSNGPEFYVNILSIVDQDQLEPGSSVLLHNKSMSIVGILADDVD 174
Query: 195 PLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPP 254
PLVS+M V+K P +Y +GGL+ QI+EIKE +ELP+ HPEL++ +GI PKGV+LYG P
Sbjct: 175 PLVSVMKVDKAPLESYSDIGGLEQQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGAP 234
Query: 255 GTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLF 314
GTGKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRE+F +A+
Sbjct: 235 GTGKTLLAKAVANETSATFLRVVGSELIQKYLGDGPKLVREMFRVAN------------- 281
Query: 315 WSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGF 374
E APSI+F+DEID++G+ R ++ SGG+ E+QRTMLELLNQLDGF
Sbjct: 282 ----------------EQAPSIVFIDEIDAVGTKRYDTTSGGEREIQRTMLELLNQLDGF 325
Query: 375 EAT 377
+ +
Sbjct: 326 DQS 328
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 41/51 (80%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRE+F +A + S
Sbjct: 236 TGKTLLAKAVANETSATFLRVVGSELIQKYLGDGPKLVREMFRVANEQAPS 286
>gi|397781199|ref|YP_006545672.1| proteasome regulatory subunit [Methanoculleus bourgensis MS2]
gi|396939701|emb|CCJ36956.1| proteasome regulatory subunit [Methanoculleus bourgensis MS2]
Length = 412
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 119/293 (40%), Positives = 175/293 (59%), Gaps = 33/293 (11%)
Query: 87 VTKIEELQLIVAEK----EQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPM 142
+T +E L + E+ E R ++ Q+ ++R L+ E++ L+ +G V +
Sbjct: 25 ITNLENRNLELREQFRQMESEKRYIETQKIRYERELRKLKSEIEQLRSPPLVIGTVTDVI 84
Query: 143 DKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMV 202
D +V+V+ +F+V + ID + + P R L +S + +LP D + M +
Sbjct: 85 DNSRVIVRSSAGPRFLVRTSQLIDPDLLKPGVRCTLNQQSLAIVDVLPTSYDAQIYGMEL 144
Query: 203 EKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 262
P+ TYE +GGL+ QI+E++E +ELP+ P LF+ +GI+ PKGVLL+GPPGTGKTLLA
Sbjct: 145 VDSPEETYENIGGLEAQIEEVREAVELPLTKPHLFEKVGISPPKGVLLHGPPGTGKTLLA 204
Query: 263 RAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILT 322
RAVAHHT F+RV GSELVQK+IGEG+R+VRELF +A K
Sbjct: 205 RAVAHHTNAHFLRVVGSELVQKYIGEGARLVRELFDLAKQK------------------- 245
Query: 323 NTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
+PSIIF+DEID+IG+ R +S + GD EVQRT+++LL ++DGFE
Sbjct: 246 ----------SPSIIFIDEIDAIGAHRNDSTTSGDREVQRTLMQLLAEMDGFE 288
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/51 (70%), Positives = 43/51 (84%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
+GKTLLARAVAHHT F+RV GSELVQK+IGEG+R+VRELF +A+ K S
Sbjct: 198 TGKTLLARAVAHHTNAHFLRVVGSELVQKYIGEGARLVRELFDLAKQKSPS 248
>gi|409095820|ref|ZP_11215844.1| proteasome-activating nucleotidase [Thermococcus zilligii AN1]
Length = 398
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 113/275 (41%), Positives = 174/275 (63%), Gaps = 29/275 (10%)
Query: 101 EQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVD 160
E +R L+A + L ++ LR E+ L++ ++ G V++ +D + +V+ + +FVV
Sbjct: 29 ELQVRTLEADKERLERELSRLRMEMSRLRQPPAFAGNVIEVLDDDRAIVQNYNGPRFVVR 88
Query: 161 IDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQI 220
I I+ + + P RVAL + + ++LP++ DP V V + P+ TY +GGL+ Q+
Sbjct: 89 IAPWIERDKLKPGSRVALDQRTMAVVELLPSEKDPSVLGFEVIERPNVTYNDIGGLEKQL 148
Query: 221 KEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSE 280
+E++E +ELP+KHP+LF+ +GI PKGVLLYGPPG GKTL+A+AVA TFIRV GSE
Sbjct: 149 QELREAVELPLKHPDLFEKVGIEPPKGVLLYGPPGCGKTLMAKAVASQVNATFIRVVGSE 208
Query: 281 LVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMD 340
LV+KFIGEG+R+V ELF +A +E AP+IIF+D
Sbjct: 209 LVRKFIGEGARLVHELFELA-----------------------------KEKAPTIIFID 239
Query: 341 EIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
EID+IG+ R++ +GG+ EV RT+++LL ++DGF+
Sbjct: 240 EIDAIGAKRLDETTGGEREVNRTLMQLLAEMDGFD 274
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 39/50 (78%)
Query: 13 GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
GKTL+A+AVA TFIRV GSELV+KFIGEG+R+V ELF +A+ K +
Sbjct: 185 GKTLMAKAVASQVNATFIRVVGSELVRKFIGEGARLVHELFELAKEKAPT 234
>gi|50309131|ref|XP_454571.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49643706|emb|CAG99658.1| KLLA0E13773p [Kluyveromyces lactis]
Length = 475
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 113/233 (48%), Positives = 147/233 (63%), Gaps = 29/233 (12%)
Query: 143 DKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMV 202
D K ++ + KFVV + + + D+ RV + Y + LP ++DP V++M V
Sbjct: 149 DDAKYVINLKQIAKFVVGLGERVSPTDIEEGMRVGVDRSKYQIELPLPPRIDPSVTMMTV 208
Query: 203 EKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 262
E+ PD TY VGG QI++++EV+ELP+ PE F LGI PKG+LLYGPPGTGKTL A
Sbjct: 209 EEKPDVTYSDVGGCKEQIEKLREVVELPLLSPERFATLGIDPPKGILLYGPPGTGKTLCA 268
Query: 263 RAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILT 322
RAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 269 RAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKK------------------ 310
Query: 323 NTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C IIF DE+D+IG +R + G+GGD+EVQRTMLEL+ QLDGF+
Sbjct: 311 ---AC--------IIFFDEVDAIGGARFDDGAGGDNEVQRTMLELITQLDGFD 352
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 262 TGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTK 309
>gi|344300889|gb|EGW31201.1| hypothetical protein SPAPADRAFT_61781 [Spathaspora passalidarum
NRRL Y-27907]
Length = 440
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 111/254 (43%), Positives = 162/254 (63%), Gaps = 29/254 (11%)
Query: 122 REELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNE 181
RE++ L+ VG + + +D +V +F V I +D + P C V L ++
Sbjct: 96 REKVDELRGYPMAVGTLEEIIDDDHAIVSSTASSEFYVSIMSFVDKGLLEPGCSVLLHHK 155
Query: 182 SYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALG 241
+ + +L + DP+VS+M ++K P +Y +GGL++QI+EIKE +ELP+ HPEL++ +G
Sbjct: 156 TVAVVGVLQDDADPMVSVMKLDKSPTESYADIGGLESQIQEIKESVELPLTHPELYEEMG 215
Query: 242 IAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAS 301
I PKGV+LYG PGTGKTLLA+AVA+ T TF+R+ GSEL+QK++G+G R+ R++F +A+
Sbjct: 216 IKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPRLCRQIFQIAA 275
Query: 302 LKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQ 361
EHAPSI+F+DEID+IG+ R ES SGG+ E+Q
Sbjct: 276 -----------------------------EHAPSIVFIDEIDAIGTKRYESTSGGEREIQ 306
Query: 362 RTMLELLNQLDGFE 375
RTMLELLNQLDGF+
Sbjct: 307 RTMLELLNQLDGFD 320
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 38/45 (84%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+R+ GSEL+QK++G+G R+ R++F +A
Sbjct: 230 TGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPRLCRQIFQIA 274
>gi|260803780|ref|XP_002596767.1| hypothetical protein BRAFLDRAFT_114160 [Branchiostoma floridae]
gi|229282027|gb|EEN52779.1| hypothetical protein BRAFLDRAFT_114160 [Branchiostoma floridae]
Length = 392
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 116/277 (41%), Positives = 163/277 (58%), Gaps = 29/277 (10%)
Query: 99 EKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFV 158
E E L+ ++ Q EL +L+ LQ G VGEV+K + + K +VK ++V
Sbjct: 24 ELESRLKEMREQLKELTKDYEKSENDLKALQSVGQIVGEVLKQLTEDKFIVKATNGPRYV 83
Query: 159 VDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDN 218
V + +D + RVAL + T+ + LP +VDPLV M +E + +Y +GGL
Sbjct: 84 VGCRRQVDKARLKAGTRVALDMTTLTIMRYLPREVDPLVYNMSIEDPGEVSYSQIGGLAE 143
Query: 219 QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSG 278
QI++++EVIELP+ +PELF +GI PKGVLLYGPPGTGKTLLARAVA +C F++V
Sbjct: 144 QIRQLREVIELPLLNPELFFRVGIDPPKGVLLYGPPGTGKTLLARAVASQLDCNFLKVVS 203
Query: 279 SELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIF 338
S +V K+IGE +R++RE+F A ++H P IIF
Sbjct: 204 SAIVDKYIGESARLIREMFGYA-----------------------------KDHQPCIIF 234
Query: 339 MDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
MDEID+IG R G+ D E+QRT++ELLNQ+DGF+
Sbjct: 235 MDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFD 271
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 35/46 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA +C F++V S +V K+IGE +R++RE+F A+
Sbjct: 181 TGKTLLARAVASQLDCNFLKVVSSAIVDKYIGESARLIREMFGYAK 226
>gi|448328811|ref|ZP_21518117.1| proteasome-activating nucleotidase [Natrinema versiforme JCM 10478]
gi|445615115|gb|ELY68774.1| proteasome-activating nucleotidase [Natrinema versiforme JCM 10478]
Length = 410
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 116/274 (42%), Positives = 169/274 (61%), Gaps = 32/274 (11%)
Query: 104 LRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVV-DID 162
L + +R L KV + E + L+ Y+ V +D +V+VK H + V+ D+
Sbjct: 46 LDDAEDRRERLREKVDRVERENETLKSSSLYIATVEDVLDDDQVIVKQHGNNQEVLTDVS 105
Query: 163 KNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKE 222
I ++ V P RVA+ N+S+ + IL + D M + + P+ TY +GG+D Q++E
Sbjct: 106 SRI-VDSVEPGDRVAV-NDSFAIQSILDTETDARAQSMEITEKPEVTYADIGGIDEQVRE 163
Query: 223 IKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELV 282
++E +E P+ PELF+ +GI P GVLLYGPPGTGKT+LA+AVA+ T+ TFI+++GSELV
Sbjct: 164 VREAVEQPLIEPELFNEVGIDPPSGVLLYGPPGTGKTMLAKAVANETDATFIKMAGSELV 223
Query: 283 QKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEI 342
+KFIGEGSR+VR+LF MA RE P+IIF+DEI
Sbjct: 224 RKFIGEGSRLVRDLFEMA-----------------------------RERQPAIIFIDEI 254
Query: 343 DSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
D+I + R ES + GD+EVQRTM++LL+++DGFEA
Sbjct: 255 DAIATRRTESKTSGDAEVQRTMMQLLSEMDGFEA 288
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 44/48 (91%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKT+LA+AVA+ T+ TFI+++GSELV+KFIGEGSR+VR+LF MAR +
Sbjct: 197 TGKTMLAKAVANETDATFIKMAGSELVRKFIGEGSRLVRDLFEMARER 244
>gi|390600447|gb|EIN09842.1| 26S proteasome subunit P45 [Punctularia strigosozonata HHB-11173
SS5]
Length = 446
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 117/278 (42%), Positives = 174/278 (62%), Gaps = 36/278 (12%)
Query: 101 EQNLRRLQAQRNELNAKVRMLREELQLLQEQGS--YVGEVVKPMDKKKVLVKVHPEGKFV 158
++ L+ A R E N + R ++L+ GS VG + + +D ++ +F
Sbjct: 84 QERLKPADATREEKNEEDRTKVDDLR-----GSPMAVGTLEEIIDDDHAIISTASGPEFY 138
Query: 159 VDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDN 218
V I +D + + P C+V L ++S ++ +L + DP+V++M ++K P +Y +GGL+
Sbjct: 139 VSIMSFVDKDLLEPGCQVLLHHKSQSIIGVLQDDADPMVNVMKLDKAPVESYADIGGLEQ 198
Query: 219 QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSG 278
QI+EIKE +ELP+ HPEL++ +GI PKGV+LYG PGTGKTLLA+AVA+ T TF+R+ G
Sbjct: 199 QIQEIKESVELPLTHPELYEEMGIKPPKGVILYGVPGTGKTLLAKAVANQTSATFLRIVG 258
Query: 279 SELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIF 338
SEL+QK++G+G ++VRELF +A EHAPSI+F
Sbjct: 259 SELIQKYLGDGPKLVRELFRVAE-----------------------------EHAPSIVF 289
Query: 339 MDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
+DEID+IG+ R +S SGG+ E+QRTMLELLNQLDGF+
Sbjct: 290 IDEIDAIGTKRYDSTSGGEREIQRTMLELLNQLDGFDT 327
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+R+ GSEL+QK++G+G ++VRELF +A
Sbjct: 236 TGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPKLVRELFRVA 280
>gi|183235205|ref|XP_001914172.1| 26S protease regulatory subunit 7 [Entamoeba histolytica HM-1:IMSS]
gi|169800682|gb|EDS89052.1| 26S protease regulatory subunit 7, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449702577|gb|EMD43192.1| 26S protease regulatory subunit 7, putative [Entamoeba histolytica
KU27]
Length = 417
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 120/258 (46%), Positives = 159/258 (61%), Gaps = 33/258 (12%)
Query: 121 LREELQLLQEQGSYVGEVVKPMDKKK---VLVKVHPEGKFVVDIDKNIDINDVTPNCRVA 177
L + +L++EQ V +K M ++ ++ + KFVV ++ + V RV
Sbjct: 67 LNADKKLMEEQPLLVSRCIKAMPDEREPRYVISIKEYAKFVVGKSNRVEKDAVQDGTRVG 126
Query: 178 LRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELF 237
+ Y + LP K+DP VS+M VE+ PD TY+ +GG QI+ I+EV+ELP+ HPE F
Sbjct: 127 VDRARYEIKMALPPKIDPSVSVMQVEEKPDVTYKDIGGCKEQIERIREVVELPMLHPEAF 186
Query: 238 DALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 297
+ LGI PKGVLLYGPPGTGKTLLARAVA+ TE TF+RV GSELVQK++GEG++MVR+LF
Sbjct: 187 ENLGIDPPKGVLLYGPPGTGKTLLARAVANRTESTFVRVIGSELVQKYVGEGAKMVRDLF 246
Query: 298 VMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGD 357
MA KK IIF DEID+IG +R + + G+
Sbjct: 247 DMAKSKK-----------------------------SCIIFFDEIDAIGGTRFQDDT-GE 276
Query: 358 SEVQRTMLELLNQLDGFE 375
SEVQRTMLEL+NQLDGF+
Sbjct: 277 SEVQRTMLELINQLDGFD 294
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/50 (70%), Positives = 44/50 (88%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGS 61
+GKTLLARAVA+ TE TF+RV GSELVQK++GEG++MVR+LF MA+ K S
Sbjct: 205 TGKTLLARAVANRTESTFVRVIGSELVQKYVGEGAKMVRDLFDMAKSKKS 254
>gi|428171366|gb|EKX40284.1| 26S proteasome regulatory complex, ATPase RPT4 [Guillardia theta
CCMP2712]
Length = 402
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 113/277 (40%), Positives = 165/277 (59%), Gaps = 29/277 (10%)
Query: 99 EKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFV 158
E+E +R ++ ELN E+L+ LQ G +GE+++ +D ++ +VK ++V
Sbjct: 34 EQEARVREMRKNLRELNKTYDKTEEDLKALQSVGQIIGELLRQLDDERYIVKASSGPRYV 93
Query: 159 VDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDN 218
V + + + P RV L + T+ +ILP +VDPLV M E +Y +GGL +
Sbjct: 94 VGCRNKVSRDQLKPGTRVTLDMTTLTIMRILPREVDPLVYHMAAEDPGKVSYSDIGGLGD 153
Query: 219 QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSG 278
QI++I+EVIELP+ +P+LF +GI PKGVLLYGPPGTGKTLLARA+A + E +F++V
Sbjct: 154 QIRQIREVIELPLINPDLFVRVGIKPPKGVLLYGPPGTGKTLLARAIACNIEASFLKVVS 213
Query: 279 SELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIF 338
S +V K+IGE +R++RE+F A +E P +IF
Sbjct: 214 SAIVDKYIGESARLIREMFGYA-----------------------------KERQPCVIF 244
Query: 339 MDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
MDEID+IG R G+ D E+QRT++ELLNQLDGF+
Sbjct: 245 MDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFD 281
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 36/46 (78%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARA+A + E +F++V S +V K+IGE +R++RE+F A+
Sbjct: 191 TGKTLLARAIACNIEASFLKVVSSAIVDKYIGESARLIREMFGYAK 236
>gi|242822819|ref|XP_002487965.1| proteasome regulatory particle subunit Rpt1, putative [Talaromyces
stipitatus ATCC 10500]
gi|218712886|gb|EED12311.1| proteasome regulatory particle subunit Rpt1, putative [Talaromyces
stipitatus ATCC 10500]
Length = 439
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 116/237 (48%), Positives = 149/237 (62%), Gaps = 29/237 (12%)
Query: 140 KPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSL 199
K +K K ++ V KFVV++ + + D+ RV + Y + LP K+DP V++
Sbjct: 110 KDPEKSKYVINVKQIAKFVVNLGERVSPTDIEEGMRVGVDRNKYQILLPLPPKIDPSVTM 169
Query: 200 MMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKT 259
M VE PD TY VGG QI++++EV+E+P+ PE F LGI PKG LLYGPPGTGKT
Sbjct: 170 MQVEDKPDVTYGDVGGSKEQIEKLREVVEMPLLSPERFVNLGIDPPKGALLYGPPGTGKT 229
Query: 260 LLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLT 319
L ARAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 230 LCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKK--------------- 274
Query: 320 ILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
C IIF DEID+IG +R + G+GGD+EVQRTMLEL+ QLDGF++
Sbjct: 275 ------AC--------IIFFDEIDAIGGARFDDGAGGDNEVQRTMLELITQLDGFDS 317
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 226 TGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTK 273
>gi|357467393|ref|XP_003603981.1| 26S proteasome regulatory ATPase subunit S10b [Medicago truncatula]
gi|355493029|gb|AES74232.1| 26S proteasome regulatory ATPase subunit S10b [Medicago truncatula]
Length = 402
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 114/280 (40%), Positives = 167/280 (59%), Gaps = 36/280 (12%)
Query: 103 NLRRLQAQRNELNAKVRML-------REELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEG 155
N + L+++RN + +R ++L+ Q G V E+++P+D ++V+VK
Sbjct: 27 NKKELESRRNSVKLDLRKSIKEFNKSEDDLKSFQSVGQIVAEILRPLDHQRVVVKASSGP 86
Query: 156 KFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGG 215
++VV +D +T RV L + T+ +ILP +VDP+V M+ E + +Y VGG
Sbjct: 87 RYVVGCRSKVDKEKLTAGTRVVLDMTTLTIMRILPREVDPVVYNMLHEDPGNVSYSAVGG 146
Query: 216 LDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIR 275
L +QI+E++E IELP+ +PELF +GI PKGVLLYGPPGTGKTLLARA+A + + F++
Sbjct: 147 LSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLK 206
Query: 276 VSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPS 335
V S ++ K+IGE SR++RE+F A R+H P
Sbjct: 207 VVSSAIIDKYIGESSRLIREMFGYA-----------------------------RDHQPC 237
Query: 336 IIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
IIFMDEID+IG R G+ D E+QRT++ELLNQLDGF+
Sbjct: 238 IIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFD 277
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 35/46 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARA+A + + F++V S ++ K+IGE SR++RE+F AR
Sbjct: 187 TGKTLLARAIASNIDANFLKVVSSAIIDKYIGESSRLIREMFGYAR 232
>gi|70943427|ref|XP_741761.1| 26S proteasome regulatory subunit 4 [Plasmodium chabaudi chabaudi]
gi|56520345|emb|CAH77685.1| 26S proteasome regulatory subunit 4, putative [Plasmodium chabaudi
chabaudi]
Length = 293
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 105/203 (51%), Positives = 145/203 (71%), Gaps = 29/203 (14%)
Query: 174 CRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKH 233
C V L N++ ++ IL ++VDPLVS+M VEK P +Y +GGL++QI+EIKE +ELP+ H
Sbjct: 1 CSVLLNNKTNSVVGILLDEVDPLVSVMKVEKAPLESYADIGGLESQIQEIKEAVELPLTH 60
Query: 234 PELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMV 293
PEL++ +GI PKGV+LYGPPGTGKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++V
Sbjct: 61 PELYEDIGIKPPKGVILYGPPGTGKTLLAKAVANETSATFLRVVGSELIQKYLGDGPKLV 120
Query: 294 RELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESG 353
RE+F +A +HAPSI+F+DEID++G+ R E+
Sbjct: 121 REMFKVAE-----------------------------DHAPSIVFIDEIDAVGTKRYEAT 151
Query: 354 SGGDSEVQRTMLELLNQLDGFEA 376
SGG+ E+QRTMLELLNQLDGF++
Sbjct: 152 SGGEREIQRTMLELLNQLDGFDS 174
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRE+F +A
Sbjct: 83 TGKTLLAKAVANETSATFLRVVGSELIQKYLGDGPKLVREMFKVA 127
>gi|67479697|ref|XP_655230.1| 26s protease regulatory subunit [Entamoeba histolytica HM-1:IMSS]
gi|56472352|gb|EAL49843.1| 26s protease regulatory subunit [Entamoeba histolytica HM-1:IMSS]
Length = 417
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 120/258 (46%), Positives = 159/258 (61%), Gaps = 33/258 (12%)
Query: 121 LREELQLLQEQGSYVGEVVKPMDKKK---VLVKVHPEGKFVVDIDKNIDINDVTPNCRVA 177
L + +L++EQ V +K M ++ ++ + KFVV ++ + V RV
Sbjct: 67 LNADKKLMEEQPLLVSRCIKAMPDEREPRYVISIKEYAKFVVGKSNRVEKDAVQDGTRVG 126
Query: 178 LRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELF 237
+ Y + LP K+DP VS+M VE+ PD TY+ +GG QI+ I+EV+ELP+ HPE F
Sbjct: 127 VDRARYEIKMALPPKIDPSVSVMQVEEKPDVTYKDIGGCKEQIERIREVVELPMLHPEAF 186
Query: 238 DALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 297
+ LGI PKGVLLYGPPGTGKTLLARAVA+ TE TF+RV GSELVQK++GEG++MVR+LF
Sbjct: 187 ENLGIDPPKGVLLYGPPGTGKTLLARAVANRTESTFVRVIGSELVQKYVGEGAKMVRDLF 246
Query: 298 VMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGD 357
MA KK IIF DEID+IG +R + + G+
Sbjct: 247 DMAKSKK-----------------------------SCIIFFDEIDAIGGTRFQDDT-GE 276
Query: 358 SEVQRTMLELLNQLDGFE 375
SEVQRTMLEL+NQLDGF+
Sbjct: 277 SEVQRTMLELINQLDGFD 294
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/50 (70%), Positives = 44/50 (88%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGS 61
+GKTLLARAVA+ TE TF+RV GSELVQK++GEG++MVR+LF MA+ K S
Sbjct: 205 TGKTLLARAVANRTESTFVRVIGSELVQKYVGEGAKMVRDLFDMAKSKKS 254
>gi|260943676|ref|XP_002616136.1| hypothetical protein CLUG_03377 [Clavispora lusitaniae ATCC 42720]
gi|238849785|gb|EEQ39249.1| hypothetical protein CLUG_03377 [Clavispora lusitaniae ATCC 42720]
Length = 440
Score = 218 bits (555), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 112/233 (48%), Positives = 149/233 (63%), Gaps = 29/233 (12%)
Query: 143 DKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMV 202
+K K ++ + KFVV + + + D+ RV + + Y + LP ++DP V++M V
Sbjct: 114 NKSKYVINIKQIAKFVVGLGERVSPTDIEEGMRVGVDRQKYEIQLPLPPRIDPSVTMMTV 173
Query: 203 EKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 262
E+ PD TY +GG QI++++EV+ELP+ PE F LGI PKG+LLYGPPGTGKTL A
Sbjct: 174 EEKPDVTYGDIGGCKEQIEKLREVVELPLLAPERFVKLGIDPPKGILLYGPPGTGKTLCA 233
Query: 263 RAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILT 322
RAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 234 RAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKK------------------ 275
Query: 323 NTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C IIF DE+D+IG +R + G+GGD+EVQRTMLEL+ QLDGF+
Sbjct: 276 ---AC--------IIFFDEVDAIGGARFDDGAGGDNEVQRTMLELITQLDGFD 317
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 227 TGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTK 274
>gi|224062085|ref|XP_002300747.1| predicted protein [Populus trichocarpa]
gi|118483383|gb|ABK93592.1| unknown [Populus trichocarpa]
gi|222842473|gb|EEE80020.1| predicted protein [Populus trichocarpa]
Length = 402
Score = 218 bits (555), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 116/289 (40%), Positives = 168/289 (58%), Gaps = 43/289 (14%)
Query: 101 EQNLRRLQAQRNELNAKVRMLRE--------------ELQLLQEQGSYVGEVVKPMDKKK 146
E + R+ EL ++VR RE +L+ LQ G +GEV++P+D ++
Sbjct: 18 EADYRKKLLNHKELESRVRSTRENLKAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNER 77
Query: 147 VLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVP 206
++VK ++VV +D +T RV L + T+ + LP +VDP+V M+ E
Sbjct: 78 LIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPG 137
Query: 207 DSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVA 266
+ +Y VGGL +QI+E++E IELP+ +PELF +GI PKGVLLYGPPGTGKTLLARA+A
Sbjct: 138 NVSYSAVGGLSDQIRELRESIELPLMNPELFIRVGIKPPKGVLLYGPPGTGKTLLARAIA 197
Query: 267 HHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIV 326
+ + F++V S ++ K+IGE +R++RE+F A
Sbjct: 198 SNIDANFLKVVSSAIIDKYIGESARLIREMFGYA-------------------------- 231
Query: 327 CNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
R+H P IIFMDEID+IG R G+ D E+QRT++ELLNQLDGF+
Sbjct: 232 ---RDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFD 277
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 35/46 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARA+A + + F++V S ++ K+IGE +R++RE+F AR
Sbjct: 187 TGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYAR 232
>gi|71014403|ref|XP_758709.1| hypothetical protein UM02562.1 [Ustilago maydis 521]
gi|46098499|gb|EAK83732.1| hypothetical protein UM02562.1 [Ustilago maydis 521]
Length = 438
Score = 218 bits (555), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 120/289 (41%), Positives = 182/289 (62%), Gaps = 37/289 (12%)
Query: 89 KIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGS--YVGEVVKPMDKKK 146
+I++ L+ E QN RL+ Q ++ +A+ R ++L+ GS VG + + +D +
Sbjct: 65 RIKDHLLLEEEFVQNQERLKPQEDK-DAEERTRVDDLR-----GSPMAVGTLEEIIDDEH 118
Query: 147 VLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVP 206
+V ++ V I +D + + P C V L +++ + +L + DP+VS+M ++K P
Sbjct: 119 AIVSSATGPEYYVSIMSFVDKDLLEPGCSVLLHHKAMAIVGVLSDDADPMVSVMKLDKAP 178
Query: 207 DSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVA 266
+Y +GGL+ QI+EIKE +ELP+ HPEL++ +GI PKGV+LYG PGTGKTLLA+AVA
Sbjct: 179 SESYADIGGLETQIQEIKEAVELPLTHPELYEEMGIRPPKGVILYGVPGTGKTLLAKAVA 238
Query: 267 HHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIV 326
+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 239 NQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAD------------------------- 273
Query: 327 CNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
EHAPSI+F+DEID++G+ R +S SGG+ E+QRT+LELLNQLDGF+
Sbjct: 274 ----EHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTLLELLNQLDGFD 318
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 228 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 272
>gi|213512535|ref|NP_001134354.1| 26S protease regulatory subunit S10B [Salmo salar]
gi|209732644|gb|ACI67191.1| 26S protease regulatory subunit S10B [Salmo salar]
Length = 389
Score = 218 bits (555), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 118/289 (40%), Positives = 168/289 (58%), Gaps = 43/289 (14%)
Query: 102 QNLRRLQAQRNELNAKVRMLRE--------------ELQLLQEQGSYVGEVVKPMDKKKV 147
Q+ R+ + E++ +++ LRE +L+ LQ G VGEV+K + ++K
Sbjct: 10 QDYRKRLLEHKEIDGRLKELREQLKEQTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKF 69
Query: 148 LVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPD 207
+VK ++VV + +D + + P RVAL + T+ + LP +VDPLV M E
Sbjct: 70 IVKATNGPRYVVGCRRQLDKSQLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGS 129
Query: 208 STYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAH 267
+Y +GGL QI+E++EVIELP+ +PELF +GI PKG LLYGPPGTGKTLLARAVA
Sbjct: 130 ISYSEIGGLAEQIRELREVIELPLTNPELFLRVGIIPPKGCLLYGPPGTGKTLLARAVAS 189
Query: 268 HTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVC 327
+C F++V S +V K+IGE +R++RE+F A
Sbjct: 190 QMDCNFLKVVSSSIVDKYIGESARLIREMFNYA--------------------------- 222
Query: 328 NFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
R+H P IIFMDEID+IG R G+ D E+QRT++ELLNQ+DGF+
Sbjct: 223 --RDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDT 269
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 35/46 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA +C F++V S +V K+IGE +R++RE+F AR
Sbjct: 178 TGKTLLARAVASQMDCNFLKVVSSSIVDKYIGESARLIREMFNYAR 223
>gi|388853599|emb|CCF52771.1| probable RPT2-26S proteasome regulatory subunit [Ustilago hordei]
Length = 438
Score = 218 bits (555), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 120/289 (41%), Positives = 182/289 (62%), Gaps = 37/289 (12%)
Query: 89 KIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGS--YVGEVVKPMDKKK 146
+I++ L+ E QN RL+ Q ++ +A+ R ++L+ GS VG + + +D +
Sbjct: 65 RIKDHLLLEEEFVQNQERLKPQEDK-DAEERTRVDDLR-----GSPMAVGTLEEIIDDEH 118
Query: 147 VLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVP 206
+V ++ V I +D + + P C V L +++ + +L + DP+VS+M ++K P
Sbjct: 119 AIVSSATGPEYYVSIMSFVDKDLLEPGCSVLLHHKAMAIVGVLSDDTDPMVSVMKLDKAP 178
Query: 207 DSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVA 266
+Y +GGL+ QI+EIKE +ELP+ HPEL++ +GI PKGV+LYG PGTGKTLLA+AVA
Sbjct: 179 SESYADIGGLETQIQEIKEAVELPLTHPELYEEMGIRPPKGVILYGVPGTGKTLLAKAVA 238
Query: 267 HHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIV 326
+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 239 NQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAD------------------------- 273
Query: 327 CNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
EHAPSI+F+DEID++G+ R +S SGG+ E+QRT+LELLNQLDGF+
Sbjct: 274 ----EHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTLLELLNQLDGFD 318
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 228 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 272
>gi|323308336|gb|EGA61582.1| Rpt1p [Saccharomyces cerevisiae FostersO]
Length = 383
Score = 218 bits (555), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 112/230 (48%), Positives = 147/230 (63%), Gaps = 29/230 (12%)
Query: 146 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
K ++ + KFVV + + + D+ RV + Y + LP ++DP V++M VE+
Sbjct: 60 KYVINLKQIAKFVVGLGERVSPTDIEEGMRVGVDRSKYNIELPLPPRIDPSVTMMTVEEK 119
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
PD TY VGG +QI++++EV+ELP+ PE F LGI PKG+LLYGPPGTGKTL ARAV
Sbjct: 120 PDVTYSDVGGCKDQIEKLREVVELPLLSPERFATLGIDPPKGILLYGPPGTGKTLCARAV 179
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTI 325
A+ T+ TFIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 180 ANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKK--------------------- 218
Query: 326 VCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C IIF DEID++G +R + G+GGD+EVQRTMLEL+ QLDGF+
Sbjct: 219 AC--------IIFFDEIDAVGGARFDDGAGGDNEVQRTMLELITQLDGFD 260
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 170 TGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTK 217
>gi|255730587|ref|XP_002550218.1| 26S protease regulatory subunit 7 [Candida tropicalis MYA-3404]
gi|240132175|gb|EER31733.1| 26S protease regulatory subunit 7 [Candida tropicalis MYA-3404]
Length = 444
Score = 218 bits (555), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 114/232 (49%), Positives = 147/232 (63%), Gaps = 29/232 (12%)
Query: 144 KKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVE 203
K K ++ + KFVV + + + DV RV + Y + LP ++DP V++M VE
Sbjct: 119 KSKYVINIKQIAKFVVGLGERLSPTDVEEGMRVGVDRHKYEIQLPLPPRIDPSVTMMTVE 178
Query: 204 KVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLAR 263
+ PD TY VGG QI++++EV+ELP+ PE F LGI PKG+LLYGPPGTGKTL AR
Sbjct: 179 EKPDVTYNDVGGCKEQIEKLREVVELPLLSPERFVKLGIDPPKGILLYGPPGTGKTLCAR 238
Query: 264 AVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTN 323
AVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 239 AVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKK------------------- 279
Query: 324 TIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C IIF DE+D+IG +R + G+GGD+EVQRTMLEL+ QLDGF+
Sbjct: 280 --AC--------IIFFDEVDAIGGARFDDGAGGDNEVQRTMLELITQLDGFD 321
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 231 TGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTK 278
>gi|367014659|ref|XP_003681829.1| hypothetical protein TDEL_0E03750 [Torulaspora delbrueckii]
gi|359749490|emb|CCE92618.1| hypothetical protein TDEL_0E03750 [Torulaspora delbrueckii]
Length = 471
Score = 218 bits (555), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 113/230 (49%), Positives = 147/230 (63%), Gaps = 29/230 (12%)
Query: 146 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
K ++ + KFVV + + + D+ RV + Y + LP ++DP V++M VE+
Sbjct: 148 KYVINLKQIAKFVVGLGERVSPTDIEEGMRVGVDRSKYHIELPLPPRIDPSVTMMTVEEK 207
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
PD TY VGG QI++++EV+ELP+ PE F ALGI PKG+LLYGPPGTGKTL ARAV
Sbjct: 208 PDVTYSDVGGCKEQIEKLREVVELPLLSPERFAALGIDPPKGILLYGPPGTGKTLCARAV 267
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTI 325
A+ T+ TFIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 268 ANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKK--------------------- 306
Query: 326 VCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C I+F DEID+IG +R + G+GGD+EVQRTMLEL+ QLDGF+
Sbjct: 307 AC--------IVFFDEIDAIGGARFDDGAGGDNEVQRTMLELITQLDGFD 348
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 258 TGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTK 305
>gi|320580457|gb|EFW94679.1| protease subunit component [Ogataea parapolymorpha DL-1]
Length = 442
Score = 218 bits (555), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 113/232 (48%), Positives = 147/232 (63%), Gaps = 29/232 (12%)
Query: 144 KKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVE 203
K K ++ + KFVV + + + D+ RV + Y + LP ++DP V++M VE
Sbjct: 117 KTKYVINIKQIAKFVVGLGERVSPTDIEEGMRVGVDRTKYEIQLPLPPRIDPSVTMMTVE 176
Query: 204 KVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLAR 263
+ PD TY VGG QI++++EV+ELP+ PE F LGI PKG+LLYGPPGTGKTL AR
Sbjct: 177 EKPDVTYSDVGGCKEQIEKLREVVELPLLSPERFVKLGIDPPKGILLYGPPGTGKTLCAR 236
Query: 264 AVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTN 323
AVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 237 AVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKK------------------- 277
Query: 324 TIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C IIF DE+D+IG +R + G+GGD+EVQRTMLEL+ QLDGF+
Sbjct: 278 --AC--------IIFFDEVDAIGGARFDDGAGGDNEVQRTMLELITQLDGFD 319
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 229 TGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTK 276
>gi|328852772|gb|EGG01915.1| ATP-dependent 26S proteasome regulatory subunit [Melampsora
larici-populina 98AG31]
Length = 439
Score = 218 bits (555), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 112/255 (43%), Positives = 162/255 (63%), Gaps = 29/255 (11%)
Query: 122 REELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNE 181
R E+ L+ VG + + +D +V ++ V+I +D + + P C V L ++
Sbjct: 95 RSEVDDLRGSPMGVGTLEEIIDDDHAIVSSATGPEYYVNILSFVDKDLLEPGCSVLLHHK 154
Query: 182 SYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALG 241
++ +L + DP+VS+M ++K P +Y +GGLD QI EIKE +ELP+ HPEL++ +G
Sbjct: 155 VMSVVGVLGDDTDPMVSVMKLDKAPTESYADIGGLDQQIMEIKESVELPLTHPELYEEMG 214
Query: 242 IAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAS 301
I PKGV+LYG PGTGKTLLA+AVAH T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 215 IKPPKGVILYGQPGTGKTLLAKAVAHQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAE 274
Query: 302 LKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQ 361
+HAPSI+F+DEID++G+ R +S SGG+ E+Q
Sbjct: 275 -----------------------------QHAPSIVFIDEIDAVGTKRYDSNSGGEREIQ 305
Query: 362 RTMLELLNQLDGFEA 376
RTMLELLNQLDGF++
Sbjct: 306 RTMLELLNQLDGFDS 320
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVAH T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 229 TGKTLLAKAVAHQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 273
>gi|242398848|ref|YP_002994272.1| Proteasome-activating nucleotidase [Thermococcus sibiricus MM 739]
gi|242265241|gb|ACS89923.1| Proteasome-activating nucleotidase [Thermococcus sibiricus MM 739]
Length = 400
Score = 218 bits (555), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 117/292 (40%), Positives = 182/292 (62%), Gaps = 37/292 (12%)
Query: 85 YYVTK-IEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMD 143
YY+ + I +L+L +R L+A + L ++ LR E+ L++ ++ G +++ +D
Sbjct: 21 YYLKRRIRQLEL-------QVRTLEADKERLERELSRLRMEMSRLRQPPAFAGTLIELLD 73
Query: 144 KKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVE 203
+ + +V+ + +FVV I I+ ++ P RVAL + + ++LP++ DP V V
Sbjct: 74 EDRAIVQNYNGPRFVVRIAPWIERENLRPGSRVALDQRTMAVIELLPSQKDPSVLGFEVI 133
Query: 204 KVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLAR 263
+ P TY+ +GGL Q+ E++E +ELP+KHPELF+ +GI P+GVLLYGPPG GKTL+A+
Sbjct: 134 ERPTVTYKDIGGLKKQLVELREAVELPLKHPELFEKVGIEPPRGVLLYGPPGCGKTLMAK 193
Query: 264 AVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTN 323
A+AH TFIRV GSELV+K+IGEG+R+V ELF +A
Sbjct: 194 ALAHEVNATFIRVIGSELVRKYIGEGARLVSELFELA----------------------- 230
Query: 324 TIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
RE APSI+F+DEID+IG+ R++ +GG+ EV RT+++LL +LDGF+
Sbjct: 231 ------REKAPSIVFIDEIDAIGAKRLDETTGGEREVNRTLMQLLAELDGFD 276
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/50 (64%), Positives = 40/50 (80%)
Query: 13 GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
GKTL+A+A+AH TFIRV GSELV+K+IGEG+R+V ELF +AR K S
Sbjct: 187 GKTLMAKALAHEVNATFIRVIGSELVRKYIGEGARLVSELFELAREKAPS 236
>gi|294891603|ref|XP_002773646.1| 26S protease regulatory subunit S10B, putative [Perkinsus marinus
ATCC 50983]
gi|239878850|gb|EER05462.1| 26S protease regulatory subunit S10B, putative [Perkinsus marinus
ATCC 50983]
Length = 394
Score = 218 bits (555), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 119/290 (41%), Positives = 171/290 (58%), Gaps = 34/290 (11%)
Query: 86 YVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKK 145
Y+ K++E + E E ++L+ Q E+ + L+ LQ G VGEV+K +D++
Sbjct: 18 YIAKVKEHR----EYEARCKKLREQIKEVENDFETSEDHLKALQSVGQIVGEVLKQLDEE 73
Query: 146 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
+ + ++VV + +D +T RVAL + T+ K +P +VDPLV M+ E
Sbjct: 74 R-FIXXSSGPRYVVTCKQRLDAEKLTTGTRVALDITTLTIMKAMPREVDPLVFSMLSEDP 132
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
+ Y VGGL+ QI+ ++EV+ELP+ +PELF +GI PKGVLLYGPPGTGKTLLARA+
Sbjct: 133 GEVRYSEVGGLNEQIRAMREVVELPLTNPELFKRVGINTPKGVLLYGPPGTGKTLLARAM 192
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTI 325
AH+ +FI+V S +V K+IGE +R++RE+F A
Sbjct: 193 AHNMTASFIKVVASAIVDKYIGESARVIREMFGYA------------------------- 227
Query: 326 VCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
+EH P IIFMDEID+IG R G+ D E+QRT++ELLNQLDGF+
Sbjct: 228 ----KEHQPCIIFMDEIDAIGGKRFGQGTSADREIQRTLMELLNQLDGFD 273
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 36/46 (78%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARA+AH+ +FI+V S +V K+IGE +R++RE+F A+
Sbjct: 183 TGKTLLARAMAHNMTASFIKVVASAIVDKYIGESARVIREMFGYAK 228
>gi|198285437|gb|ACH85257.1| proteasome (prosome, macropain) 26S subunit, ATPase, 6 [Salmo
salar]
Length = 387
Score = 218 bits (555), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 118/289 (40%), Positives = 168/289 (58%), Gaps = 43/289 (14%)
Query: 102 QNLRRLQAQRNELNAKVRMLRE--------------ELQLLQEQGSYVGEVVKPMDKKKV 147
Q+ R+ + E++ +++ LRE +L+ LQ G VGEV+K + ++K
Sbjct: 8 QDYRKRLLEHKEIDGRLKELREQLKEQTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKF 67
Query: 148 LVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPD 207
+VK ++VV + +D + + P RVAL + T+ + LP +VDPLV M E
Sbjct: 68 IVKATNGPRYVVGCRRQLDKSQLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGS 127
Query: 208 STYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAH 267
+Y +GGL QI+E++EVIELP+ +PELF +GI PKG LLYGPPGTGKTLLARAVA
Sbjct: 128 ISYSEIGGLAEQIRELREVIELPLTNPELFLRVGIIPPKGCLLYGPPGTGKTLLARAVAS 187
Query: 268 HTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVC 327
+C F++V S +V K+IGE +R++RE+F A
Sbjct: 188 QMDCNFLKVVSSSIVDKYIGESARLIREMFNYA--------------------------- 220
Query: 328 NFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
R+H P IIFMDEID+IG R G+ D E+QRT++ELLNQ+DGF+
Sbjct: 221 --RDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDT 267
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 35/46 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA +C F++V S +V K+IGE +R++RE+F AR
Sbjct: 176 TGKTLLARAVASQMDCNFLKVVSSSIVDKYIGESARLIREMFNYAR 221
>gi|323304204|gb|EGA57980.1| Rpt1p [Saccharomyces cerevisiae FostersB]
Length = 467
Score = 218 bits (555), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 112/230 (48%), Positives = 147/230 (63%), Gaps = 29/230 (12%)
Query: 146 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
K ++ + KFVV + + + D+ RV + Y + LP ++DP V++M VE+
Sbjct: 144 KYVINLKQIAKFVVGLGERVSPTDIEEGMRVGVDRSKYNIELPLPPRIDPSVTMMSVEEK 203
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
PD TY VGG +QI++++EV+ELP+ PE F LGI PKG+LLYGPPGTGKTL ARAV
Sbjct: 204 PDVTYSDVGGCKDQIEKLREVVELPLLSPERFATLGIDPPKGILLYGPPGTGKTLCARAV 263
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTI 325
A+ T+ TFIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 264 ANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKK--------------------- 302
Query: 326 VCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C IIF DEID++G +R + G+GGD+EVQRTMLEL+ QLDGF+
Sbjct: 303 AC--------IIFFDEIDAVGGARFDDGAGGDNEVQRTMLELITQLDGFD 344
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 254 TGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTK 301
>gi|146413066|ref|XP_001482504.1| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 445
Score = 218 bits (555), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 113/233 (48%), Positives = 149/233 (63%), Gaps = 29/233 (12%)
Query: 143 DKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMV 202
+K K ++ + KFVV + + + D+ RV + + Y + LP ++DP V++M V
Sbjct: 119 NKAKYVINIKQIAKFVVGLGERVSPTDIEEGMRVGVDRQKYEIQLPLPPRIDPSVTMMTV 178
Query: 203 EKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 262
E+ PD TY VGG QI++++EV+ELP+ PE F LGI PKG+LLYGPPGTGKTL A
Sbjct: 179 EEKPDVTYSDVGGCKEQIEKLREVVELPLLLPERFVKLGIDPPKGILLYGPPGTGKTLCA 238
Query: 263 RAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILT 322
RAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 239 RAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKK------------------ 280
Query: 323 NTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C IIF DE+D+IG +R + G+GGD+EVQRTMLEL+ QLDGF+
Sbjct: 281 ---AC--------IIFFDEVDAIGGARFDDGAGGDNEVQRTMLELITQLDGFD 322
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 232 TGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTK 279
>gi|320580453|gb|EFW94675.1| 26s protease regulatory subunit, putative [Ogataea parapolymorpha
DL-1]
Length = 756
Score = 218 bits (555), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 110/254 (43%), Positives = 165/254 (64%), Gaps = 29/254 (11%)
Query: 122 REELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNE 181
RE++ ++ +G + + +D +V ++ V I +D + P C+V L ++
Sbjct: 412 REKIDDIRGTPMSIGTLEEIIDDDHAIVSSSSGPEYYVSILSFVDKGLLEPGCQVLLHHK 471
Query: 182 SYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALG 241
+ ++ +L ++ DP+V++M ++K P +Y +GGL++QI+EIKE +ELP+ HPEL++ +G
Sbjct: 472 TVSIVGVLQDETDPVVNVMKMDKSPTESYADIGGLESQIQEIKEAVELPLTHPELYEEMG 531
Query: 242 IAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAS 301
I PKGV+LYG PGTGKTLLA+AVA+ T +F+R+ GSEL+QK++G+G RM R+LF +AS
Sbjct: 532 IKPPKGVILYGAPGTGKTLLAKAVANQTSASFLRIVGSELIQKYLGDGPRMCRQLFKVAS 591
Query: 302 LKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQ 361
E+APSI+F+DEID+IGS R ES SGG+ EVQ
Sbjct: 592 -----------------------------ENAPSIVFIDEIDAIGSKRYESSSGGEREVQ 622
Query: 362 RTMLELLNQLDGFE 375
RTMLELLNQLDGF+
Sbjct: 623 RTMLELLNQLDGFD 636
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 38/45 (84%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T +F+R+ GSEL+QK++G+G RM R+LF +A
Sbjct: 546 TGKTLLAKAVANQTSASFLRIVGSELIQKYLGDGPRMCRQLFKVA 590
>gi|81362425|gb|ABB71588.1| 26S proteasome subunit ATPase 4 [Schistosoma mansoni]
Length = 407
Score = 218 bits (555), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 111/242 (45%), Positives = 157/242 (64%), Gaps = 29/242 (11%)
Query: 135 VGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVD 194
VG + + +D V+V + V I +D + P C V L ++ + + +L ++ D
Sbjct: 76 VGTLEEIIDDNHVVVSTSVGSEHYVSILSFVDKGMLEPGCSVLLNHKVHAVVGVLTDETD 135
Query: 195 PLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPP 254
P+V++M +EK P TY +GGLD QI+EIKE +ELP+ HPEL++ +GI PKGV+LYG P
Sbjct: 136 PMVTVMKLEKAPQETYADIGGLDVQIQEIKESVELPLTHPELYEEMGIRPPKGVILYGAP 195
Query: 255 GTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLF 314
GTGKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 196 GTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRLAE------------- 242
Query: 315 WSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGF 374
E+APSI+F+DEID++G+ R ES SGG+ E+QRTMLELLNQLDGF
Sbjct: 243 ----------------ENAPSIVFIDEIDAVGTKRYESNSGGEREIQRTMLELLNQLDGF 286
Query: 375 EA 376
++
Sbjct: 287 DS 288
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 197 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRLA 241
>gi|384494309|gb|EIE84800.1| 26S protease regulatory subunit 4 [Rhizopus delemar RA 99-880]
gi|384495119|gb|EIE85610.1| 26S protease regulatory subunit 4 [Rhizopus delemar RA 99-880]
Length = 379
Score = 218 bits (555), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 117/288 (40%), Positives = 177/288 (61%), Gaps = 33/288 (11%)
Query: 89 KIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVL 148
+I++ L+ E QN RL+ Q + R + L+ VG + + +D V+
Sbjct: 6 RIKDYLLLEEEFVQNQERLKPQEERDQEE----RTRVDDLRGSPMTVGSLEEIIDDDHVI 61
Query: 149 VKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDS 208
V ++ V + +D + + P C V L +++ ++ +L + DP+VS+M +EK P
Sbjct: 62 VSSTTGPEYYVSVMSFVDKDLLEPGCSVLLHHKTMSVVGVLADDTDPMVSVMKLEKAPTE 121
Query: 209 TYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH 268
+Y +GGL+ QI+EIKE +ELP+ HPEL++ +GI PKGV+LYG PGTGKTLLA+AVA+
Sbjct: 122 SYADIGGLEKQIQEIKEAVELPLTHPELYEEMGIKPPKGVILYGVPGTGKTLLAKAVANQ 181
Query: 269 TECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCN 328
T TF+R+ GSEL+QK++G+G ++VRELF +A
Sbjct: 182 TSATFLRIVGSELIQKYLGDGPKLVRELFRVAE--------------------------- 214
Query: 329 FREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
E+APSI+F+DEID++G+ R +S SGG+ E+QRTMLELLNQLDGF++
Sbjct: 215 --ENAPSIVFIDEIDAVGTKRYDSTSGGEREIQRTMLELLNQLDGFDS 260
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 40/51 (78%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
+GKTLLA+AVA+ T TF+R+ GSEL+QK++G+G ++VRELF +A S
Sbjct: 169 TGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPKLVRELFRVAEENAPS 219
>gi|255644457|gb|ACU22732.1| unknown [Glycine max]
Length = 303
Score = 218 bits (555), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 119/302 (39%), Positives = 173/302 (57%), Gaps = 52/302 (17%)
Query: 97 VAEKEQNLRRLQA---------QRNELNAKVRMLRE--------------ELQLLQEQGS 133
+AE E +RR A Q EL ++VR +RE +L+ LQ G
Sbjct: 1 MAEAEDAVRRRNAVAEYRKKLLQHKELESRVRSVRENLRASKKEFNKTEDDLKSLQSVGQ 60
Query: 134 YVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKV 193
+GEV++P+D ++++VK ++V+ +D +T RV L + T+ + LP +V
Sbjct: 61 IIGEVLRPLDNERLIVKASSGPRYVIGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREV 120
Query: 194 DPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGP 253
DP+V M+ E + +Y VGGL +QI+E++E IELP+ +PELF +GI PKGVLLYGP
Sbjct: 121 DPVVYNMLHEDPGNISYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGP 180
Query: 254 PGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLL 313
PGTGKTLLARA+A + + F++V S ++ K+IGE +R++R +F A
Sbjct: 181 PGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIRGMFGYA------------- 227
Query: 314 FWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDG 373
R+H P IIFMDEID+IG R G+ D E+QRT++ELLNQLDG
Sbjct: 228 ----------------RDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDG 271
Query: 374 FE 375
F+
Sbjct: 272 FD 273
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 34/46 (73%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARA+A + + F++V S ++ K+IGE +R++R +F AR
Sbjct: 183 TGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIRGMFGYAR 228
>gi|212546613|ref|XP_002153460.1| proteasome regulatory particle subunit Rpt1, putative [Talaromyces
marneffei ATCC 18224]
gi|210064980|gb|EEA19075.1| proteasome regulatory particle subunit Rpt1, putative [Talaromyces
marneffei ATCC 18224]
Length = 349
Score = 218 bits (555), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 116/237 (48%), Positives = 149/237 (62%), Gaps = 29/237 (12%)
Query: 140 KPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSL 199
K +K K ++ V KFVV++ + + D+ RV + Y + LP K+DP V++
Sbjct: 20 KDPEKSKYVINVKQIAKFVVNLGERVSPTDIEEGMRVGVDRNKYQILLPLPPKIDPSVTM 79
Query: 200 MMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKT 259
M VE PD TY VGG QI++++EV+E+P+ PE F LGI PKG LLYGPPGTGKT
Sbjct: 80 MQVEDKPDVTYGDVGGSKEQIEKLREVVEMPLLSPERFVNLGIDPPKGALLYGPPGTGKT 139
Query: 260 LLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLT 319
L ARAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 140 LCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKK--------------- 184
Query: 320 ILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
C IIF DEID+IG +R + G+GGD+EVQRTMLEL+ QLDGF++
Sbjct: 185 ------AC--------IIFFDEIDAIGGARFDDGAGGDNEVQRTMLELITQLDGFDS 227
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 136 TGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTK 183
>gi|320164654|gb|EFW41553.1| proteasome 26S subunit [Capsaspora owczarzaki ATCC 30864]
Length = 391
Score = 218 bits (555), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 122/289 (42%), Positives = 170/289 (58%), Gaps = 44/289 (15%)
Query: 101 EQNLRRLQAQRNELNAKVRMLREEL--------------QLLQEQGSYVGEVVKPMDKKK 146
EQ ++LQ R E +KVR RE+L + LQ G VGEV++ +D +
Sbjct: 12 EQYRKKLQEHR-EFESKVRQSREKLAALNQTFKKAEDDFKALQSVGQVVGEVLRQLDDDR 70
Query: 147 VLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVP 206
+VK ++VV + ++ + P+ RVAL + T+ + LP +VDPLV M E
Sbjct: 71 FIVKASSGPRYVVGCRRQLNKELLKPSTRVALDMTTLTIMRALPREVDPLVFNMSSEDPG 130
Query: 207 DSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVA 266
+ +Y VGGL Q++E++EVIELP+ +PELF +GI PKGVLLYGPPGTGKTLLARAVA
Sbjct: 131 NVSYGEVGGLGEQLRELREVIELPLLNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAVA 190
Query: 267 HHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIV 326
+ E +F++V S +V K+IGE +R++RE+F A
Sbjct: 191 SNIEASFLKVVSSSIVDKYIGESARLIREMFGYA-------------------------- 224
Query: 327 CNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
R+H P IIFMDEID+IG R G+ D E+QRT++ELLNQ+DGF+
Sbjct: 225 ---RDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFD 270
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 36/46 (78%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA + E +F++V S +V K+IGE +R++RE+F AR
Sbjct: 180 TGKTLLARAVASNIEASFLKVVSSSIVDKYIGESARLIREMFGYAR 225
>gi|401624903|gb|EJS42940.1| rpt1p [Saccharomyces arboricola H-6]
Length = 467
Score = 218 bits (555), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 112/230 (48%), Positives = 147/230 (63%), Gaps = 29/230 (12%)
Query: 146 KVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
K ++ + KFVV + + + D+ RV + Y + LP ++DP V++M VE+
Sbjct: 144 KYVINLKQIAKFVVGLGERVSPTDIEEGMRVGVDRSKYNIELPLPPRIDPSVTMMTVEEK 203
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
PD TY VGG +QI++++EV+ELP+ PE F LGI PKG+LLYGPPGTGKTL ARAV
Sbjct: 204 PDVTYSDVGGCKDQIEKLREVVELPLLSPERFATLGIDPPKGILLYGPPGTGKTLCARAV 263
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTI 325
A+ T+ TFIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 264 ANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKK--------------------- 302
Query: 326 VCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
C IIF DEID++G +R + G+GGD+EVQRTMLEL+ QLDGF+
Sbjct: 303 AC--------IIFFDEIDAVGGARFDDGAGGDNEVQRTMLELITQLDGFD 344
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 254 TGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTK 301
>gi|91094943|ref|XP_967788.1| PREDICTED: similar to 26S protease regulatory subunit S10b
[Tribolium castaneum]
gi|270016772|gb|EFA13218.1| hypothetical protein TcasGA2_TC010321 [Tribolium castaneum]
Length = 392
Score = 218 bits (555), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 116/278 (41%), Positives = 163/278 (58%), Gaps = 29/278 (10%)
Query: 99 EKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFV 158
E E L+ ++ Q +L + +L+ LQ G VGEV+K + ++K +VK ++V
Sbjct: 24 EVESRLKEMREQLKDLTKQYDKSENDLKALQSMGQIVGEVLKQLTEEKFIVKATNGPRYV 83
Query: 159 VDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDN 218
V + +D + RVAL + T+ + LP +VDPLV M E D TY +GGL
Sbjct: 84 VGCRRQLDKTKLKAGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDVTYSAIGGLSE 143
Query: 219 QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSG 278
QI+E++EVIELP+ +PELF +GI PKG LLYGPPGTGKTLLARAVA + F++V
Sbjct: 144 QIRELREVIELPLMNPELFMRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVS 203
Query: 279 SELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIF 338
S +V K+IGE +R++RE+F A ++H P IIF
Sbjct: 204 SAIVDKYIGESARLIREMFNYA-----------------------------KDHQPCIIF 234
Query: 339 MDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEA 376
MDEID+IG R G+ D E+QRT++ELLNQ+DGF++
Sbjct: 235 MDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDS 272
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 34/46 (73%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA + F++V S +V K+IGE +R++RE+F A+
Sbjct: 181 TGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYAK 226
>gi|310790858|gb|EFQ26391.1| 26S proteasome subunit P45 family protein [Glomerella graminicola
M1.001]
Length = 391
Score = 218 bits (555), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 116/277 (41%), Positives = 166/277 (59%), Gaps = 29/277 (10%)
Query: 99 EKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFV 158
E E L+ L+ + +L + + ++ LQ G +GEV+K +D ++ +VK ++V
Sbjct: 23 EWEAKLKSLRLEIKDLQREFDRTEDNIKALQSVGQIIGEVLKQLDDERFIVKASSGPRYV 82
Query: 159 VDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDN 218
V +D + RVAL + T+ ++LP +VDPLV M +E ++ +GGL++
Sbjct: 83 VGCRSKVDKVKLKQGTRVALDMTTLTIMRMLPREVDPLVYNMSLEDPGQVSFAGIGGLND 142
Query: 219 QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSG 278
QI+E++EVIELP+K+PELF +GI PKGVLLYGPPGTGKTLLARAVA E F++V
Sbjct: 143 QIRELREVIELPLKNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAVASSLETNFLKVVS 202
Query: 279 SELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIF 338
S +V K+IGE +R++RE+F A +EH P IIF
Sbjct: 203 SAIVDKYIGESARLIREMFGYA-----------------------------KEHEPCIIF 233
Query: 339 MDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
MDEID+IG R G+ D E+QRT++ELLNQLDGF+
Sbjct: 234 MDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFD 270
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 34/46 (73%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA E F++V S +V K+IGE +R++RE+F A+
Sbjct: 180 TGKTLLARAVASSLETNFLKVVSSAIVDKYIGESARLIREMFGYAK 225
>gi|331219649|ref|XP_003322501.1| 26S protease regulatory subunit 4 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309301491|gb|EFP78082.1| 26S protease regulatory subunit 4 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 439
Score = 218 bits (555), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 112/255 (43%), Positives = 162/255 (63%), Gaps = 29/255 (11%)
Query: 122 REELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNE 181
R E+ L+ VG + + +D +V ++ V+I +D + + P C V L ++
Sbjct: 95 RSEVDDLRGSPMGVGTLEEIIDDDHAIVSSATGPEYYVNILSFVDKDLLEPGCSVLLHHK 154
Query: 182 SYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALG 241
++ +L + DP+VS+M ++K P +Y +GGLD QI EIKE +ELP+ HPEL++ +G
Sbjct: 155 VMSVVGVLGDDTDPMVSVMKLDKAPTESYADIGGLDQQIMEIKESVELPLTHPELYEEMG 214
Query: 242 IAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAS 301
I PKGV+LYG PGTGKTLLA+AVAH T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 215 IKPPKGVILYGQPGTGKTLLAKAVAHQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAE 274
Query: 302 LKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQ 361
+HAPSI+F+DEID++G+ R +S SGG+ E+Q
Sbjct: 275 -----------------------------QHAPSIVFIDEIDAVGTKRYDSNSGGEREIQ 305
Query: 362 RTMLELLNQLDGFEA 376
RTMLELLNQLDGF++
Sbjct: 306 RTMLELLNQLDGFDS 320
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVAH T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 229 TGKTLLAKAVAHQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 273
>gi|225458173|ref|XP_002281107.1| PREDICTED: 26S protease regulatory subunit S10B homolog B [Vitis
vinifera]
gi|147800891|emb|CAN75568.1| hypothetical protein VITISV_010255 [Vitis vinifera]
gi|302142551|emb|CBI19754.3| unnamed protein product [Vitis vinifera]
Length = 398
Score = 218 bits (555), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 114/277 (41%), Positives = 166/277 (59%), Gaps = 43/277 (15%)
Query: 113 ELNAKVRMLRE--------------ELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFV 158
EL+++VR +RE +L+ LQ G +GEV++P+D ++++VK ++V
Sbjct: 26 ELDSRVRSVRESLRGAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYV 85
Query: 159 VDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDN 218
V +D +T RV L + T+ + LP +VDP+V M+ E + +Y VGGL +
Sbjct: 86 VGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSD 145
Query: 219 QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSG 278
QI+E++E IELP+ +PELF +GI PKGVLLYGPPGTGKTLLARA+A + + F++V
Sbjct: 146 QIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVS 205
Query: 279 SELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIF 338
S ++ K+IGE +R++RE+F A R+H P IIF
Sbjct: 206 SAIIDKYIGESARLIREMFGYA-----------------------------RDHQPCIIF 236
Query: 339 MDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
MDEID+IG R G+ D E+QRT++ELLNQLDGF+
Sbjct: 237 MDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFD 273
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 35/46 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARA+A + + F++V S ++ K+IGE +R++RE+F AR
Sbjct: 183 TGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYAR 228
>gi|449547415|gb|EMD38383.1| hypothetical protein CERSUDRAFT_82637 [Ceriporiopsis subvermispora
B]
Length = 412
Score = 218 bits (554), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 113/265 (42%), Positives = 164/265 (61%), Gaps = 31/265 (11%)
Query: 113 ELNAKVRMLR--EELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDV 170
+ N K ++R EE++ +Q +G+ ++P+D+ +V +VV I +D +
Sbjct: 59 QANLKRELIRAQEEVKRIQSVPLVIGQFLEPIDQATAIVGSTTGSNYVVRILSTLDRELL 118
Query: 171 TPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELP 230
P+ VAL S L ILP + D ++++ E+ PD TY+ VGG+D Q +EI+E +ELP
Sbjct: 119 KPSSSVALHRHSNALVDILPPEADSSIAMLTKEQRPDVTYQDVGGMDAQKQEIREAVELP 178
Query: 231 VKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGS 290
+ H EL+ +GI P+GVLLYGPPGTGKT+L +AVAHHT +FIRV GSE VQK++GEG
Sbjct: 179 LTHFELYKKIGIDPPRGVLLYGPPGTGKTMLVKAVAHHTTASFIRVVGSEFVQKYLGEGP 238
Query: 291 RMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRI 350
RMVR++F +A RE+AP+IIF+DEID+I + R
Sbjct: 239 RMVRDVFRLA-----------------------------RENAPAIIFIDEIDAIATKRF 269
Query: 351 ESGSGGDSEVQRTMLELLNQLDGFE 375
++ +G D EVQR +LELLNQ+DGF+
Sbjct: 270 DAQTGADREVQRILLELLNQMDGFD 294
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 30/46 (65%), Positives = 39/46 (84%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKT+L +AVAHHT +FIRV GSE VQK++GEG RMVR++F +AR
Sbjct: 204 TGKTMLVKAVAHHTTASFIRVVGSEFVQKYLGEGPRMVRDVFRLAR 249
>gi|443894553|dbj|GAC71901.1| 26S proteasome regulatory complex, ATPase RPT2 [Pseudozyma
antarctica T-34]
Length = 438
Score = 218 bits (554), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 120/289 (41%), Positives = 182/289 (62%), Gaps = 37/289 (12%)
Query: 89 KIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGS--YVGEVVKPMDKKK 146
+I++ L+ E QN RL+ Q ++ +A+ R ++L+ GS VG + + +D +
Sbjct: 65 RIKDHLLLEEEFVQNQERLKPQEDK-DAEERTRVDDLR-----GSPMAVGTLEEIIDDEH 118
Query: 147 VLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVP 206
+V ++ V I +D + + P C V L +++ + +L + DP+VS+M ++K P
Sbjct: 119 AIVSSATGPEYYVSIMSFVDKDLLEPGCSVLLHHKAMAIVGVLSDDADPMVSVMKLDKAP 178
Query: 207 DSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVA 266
+Y +GGL+ QI+EIKE +ELP+ HPEL++ +GI PKGV+LYG PGTGKTLLA+AVA
Sbjct: 179 SESYADIGGLETQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGVPGTGKTLLAKAVA 238
Query: 267 HHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIV 326
+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 239 NQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAD------------------------- 273
Query: 327 CNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
EHAPSI+F+DEID++G+ R +S SGG+ E+QRT+LELLNQLDGF+
Sbjct: 274 ----EHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTLLELLNQLDGFD 318
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 228 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 272
>gi|400598782|gb|EJP66489.1| 26S proteasome regulatory complex, ATPase RPT4 [Beauveria bassiana
ARSEF 2860]
Length = 391
Score = 218 bits (554), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 117/277 (42%), Positives = 165/277 (59%), Gaps = 29/277 (10%)
Query: 99 EKEQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFV 158
E E L+ L+ + L E ++ LQ G +GEV+K +D+++ +VK ++V
Sbjct: 23 EWEAKLKNLRLEIKGLQKDFDRTEENIKALQSVGQIIGEVLKQLDEERFIVKASSGPRYV 82
Query: 159 VDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDN 218
V +D + RVAL + T+ ++LP +VDPLV M +E ++ +GGL++
Sbjct: 83 VGCRSKVDKAKMKQGTRVALDMTTLTIMRMLPREVDPLVYNMSLEDPGQVSFAGIGGLND 142
Query: 219 QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSG 278
QI+E++EVIELP+K+PELF +GI PKGVLLYGPPGTGKTLLARAVA E F++V
Sbjct: 143 QIRELREVIELPLKNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAVACSLETNFLKVVS 202
Query: 279 SELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIF 338
S +V K+IGE +R++RE+F A +EH P IIF
Sbjct: 203 SAIVDKYIGESARLIREMFGYA-----------------------------KEHEPCIIF 233
Query: 339 MDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFE 375
MDEID+IG R G+ D E+QRT++ELLNQLDGF+
Sbjct: 234 MDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFD 270
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 34/46 (73%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA E F++V S +V K+IGE +R++RE+F A+
Sbjct: 180 TGKTLLARAVACSLETNFLKVVSSAIVDKYIGESARLIREMFGYAK 225
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.136 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,673,225,511
Number of Sequences: 23463169
Number of extensions: 234871042
Number of successful extensions: 1178463
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 20669
Number of HSP's successfully gapped in prelim test: 3378
Number of HSP's that attempted gapping in prelim test: 1100978
Number of HSP's gapped (non-prelim): 68690
length of query: 378
length of database: 8,064,228,071
effective HSP length: 144
effective length of query: 234
effective length of database: 8,980,499,031
effective search space: 2101436773254
effective search space used: 2101436773254
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 78 (34.7 bits)