Your job contains 1 sequence.
>psy6098
YLKPLHPTWIVSGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKG
SSRGTEFFTMDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRM
LREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRN
ESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDAL
GIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA
SLKKLAFAHHPLLFWSLLTILTNTIVCNFREHAPSIIFMDEIDSIGSSRIESGSGGDSEV
QRTMLELLNQLDGFEATK
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy6098
(378 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0020369 - symbol:Rpt6 "Regulatory particle triple-... 977 3.9e-110 2
UNIPROTKB|F1NU79 - symbol:PSMC5 "Uncharacterized protein"... 930 4.5e-105 2
UNIPROTKB|Q6AZU7 - symbol:Q6AZU7 "Putative uncharacterize... 929 5.8e-105 2
ZFIN|ZDB-GENE-030131-6547 - symbol:psmc5 "proteasome (pro... 929 5.8e-105 2
UNIPROTKB|P62194 - symbol:PSMC5 "26S protease regulatory ... 928 7.3e-105 2
UNIPROTKB|P62195 - symbol:PSMC5 "26S protease regulatory ... 928 7.3e-105 2
UNIPROTKB|P62197 - symbol:PSMC5 "26S protease regulatory ... 928 7.3e-105 2
MGI|MGI:105047 - symbol:Psmc5 "protease (prosome, macropa... 928 7.3e-105 2
RGD|708376 - symbol:Psmc5 "proteasome (prosome, macropain... 928 7.3e-105 2
UNIPROTKB|Q4RG45 - symbol:GSTENG00035021001 "Chromosome 2... 923 2.5e-104 2
UNIPROTKB|Q6P380 - symbol:psmc5 "Putative uncharacterized... 922 3.2e-104 2
UNIPROTKB|P46470 - symbol:psmc5 "26S protease regulatory ... 917 9.5e-103 2
FB|FBgn0039788 - symbol:Rpt6R "Regulatory particle triple... 885 1.4e-99 2
UNIPROTKB|J3QQM1 - symbol:PSMC5 "26S protease regulatory ... 647 9.0e-99 3
UNIPROTKB|J3QSA9 - symbol:PSMC5 "26S protease regulatory ... 928 1.3e-96 2
UNIPROTKB|J3KRP2 - symbol:PSMC5 "26S protease regulatory ... 928 1.3e-96 2
WB|WBGene00004506 - symbol:rpt-6 species:6239 "Caenorhabd... 838 1.8e-95 2
DICTYBASE|DDB_G0292382 - symbol:psmC5 "HIV TAT binding-pr... 822 1.6e-92 2
POMBASE|SPBC23G7.12c - symbol:rpt6 "19S proteasome regula... 817 1.6e-92 2
TAIR|locus:2147670 - symbol:RPT6A "regulatory particle tr... 826 2.7e-92 2
TAIR|locus:2147685 - symbol:AT5G20000 species:3702 "Arabi... 826 2.7e-92 2
WB|WBGene00018991 - symbol:F56F11.4 species:6239 "Caenorh... 808 3.4e-92 2
GENEDB_PFALCIPARUM|PFL2345c - symbol:PFL2345c "tat-bindin... 810 2.1e-90 2
UNIPROTKB|Q8I4U5 - symbol:PFL2345c "Tat-binding protein h... 810 2.1e-90 2
CGD|CAL0006022 - symbol:RPT6 species:5476 "Candida albica... 796 2.7e-90 2
UNIPROTKB|E2RM61 - symbol:PSMC5 "Uncharacterized protein"... 770 3.5e-88 2
SGD|S000003016 - symbol:RPT6 "ATPase of the 19S regulator... 760 2.7e-86 2
UNIPROTKB|J3QLH6 - symbol:PSMC5 "26S protease regulatory ... 859 6.9e-86 1
ASPGD|ASPL0000064945 - symbol:AN6988 species:162425 "Emer... 746 2.4e-85 2
UNIPROTKB|J3QRW1 - symbol:PSMC5 "26S protease regulatory ... 594 8.4e-58 1
UNIPROTKB|F1NSP7 - symbol:PSMC1 "26S protease regulatory ... 417 4.7e-48 2
UNIPROTKB|F1NTZ4 - symbol:PSMC1 "26S protease regulatory ... 417 4.7e-48 2
UNIPROTKB|A4FUZ3 - symbol:PSMC1 "Proteasome (Prosome, mac... 417 4.7e-48 2
UNIPROTKB|F1PQ40 - symbol:PSMC1 "Uncharacterized protein"... 417 4.7e-48 2
UNIPROTKB|P62191 - symbol:PSMC1 "26S protease regulatory ... 417 4.7e-48 2
UNIPROTKB|F2Z5J1 - symbol:PSMC1 "Uncharacterized protein"... 417 4.7e-48 2
MGI|MGI:106054 - symbol:Psmc1 "protease (prosome, macropa... 417 4.7e-48 2
RGD|621097 - symbol:Psmc1 "proteasome (prosome, macropain... 417 4.7e-48 2
UNIPROTKB|B4DR63 - symbol:PSMC1 "cDNA FLJ58247, highly si... 412 1.6e-47 2
UNIPROTKB|Q90732 - symbol:PSMC1 "26S protease regulatory ... 414 2.6e-47 2
GENEDB_PFALCIPARUM|PF10_0081 - symbol:PF10_0081 "26S prot... 407 4.2e-47 2
UNIPROTKB|Q8IJW0 - symbol:PF10_0081 "26S proteasome regul... 407 4.2e-47 2
SGD|S000002165 - symbol:RPT2 "ATPase of the 19S regulator... 378 6.8e-47 3
WB|WBGene00004502 - symbol:rpt-2 species:6239 "Caenorhabd... 412 8.6e-47 2
ZFIN|ZDB-GENE-040625-69 - symbol:psmc1b "proteasome (pros... 404 1.1e-46 2
UNIPROTKB|Q58576 - symbol:pan "Proteasome-activating nucl... 421 2.9e-46 2
ZFIN|ZDB-GENE-030131-8730 - symbol:psmc1a "proteasome (pr... 400 2.9e-46 2
FB|FBgn0015282 - symbol:Rpt2 "Regulatory particle triple-... 399 3.7e-46 2
TAIR|locus:2159996 - symbol:RPT4A "regulatory particle tr... 396 2.6e-45 2
UNIPROTKB|F1NCS8 - symbol:PSMC6 "Uncharacterized protein"... 400 3.3e-45 2
UNIPROTKB|Q5ZKX2 - symbol:PSMC6 "Uncharacterized protein"... 400 3.3e-45 2
UNIPROTKB|F1MLV1 - symbol:PSMC6 "26S protease regulatory ... 395 1.1e-44 2
UNIPROTKB|Q2KIW6 - symbol:PSMC6 "26S protease regulatory ... 395 1.1e-44 2
UNIPROTKB|J9P1N0 - symbol:PSMC6 "Uncharacterized protein"... 395 1.1e-44 2
UNIPROTKB|P62333 - symbol:PSMC6 "26S protease regulatory ... 395 1.1e-44 2
UNIPROTKB|F1SFE6 - symbol:PSMC6 "Uncharacterized protein"... 395 1.1e-44 2
UNIPROTKB|P62335 - symbol:PSMC6 "26S protease regulatory ... 395 1.1e-44 2
MGI|MGI:1914339 - symbol:Psmc6 "proteasome (prosome, macr... 395 1.1e-44 2
RGD|1308825 - symbol:Psmc6 "proteasome (prosome, macropai... 395 1.1e-44 2
RGD|2318218 - symbol:LOC100365869 "proteasome (prosome, m... 395 1.1e-44 2
ZFIN|ZDB-GENE-030131-304 - symbol:psmc6 "proteasome (pros... 394 1.4e-44 2
WB|WBGene00004501 - symbol:rpt-1 species:6239 "Caenorhabd... 411 1.8e-44 2
UNIPROTKB|Q18787 - symbol:rpt-1 "26S protease regulatory ... 411 1.8e-44 2
FB|FBgn0028687 - symbol:Rpt1 "Regulatory particle triple-... 410 2.3e-44 2
POMBASE|SPBC4.07c - symbol:rpt2 "19S proteasome regulator... 382 2.9e-44 2
UNIPROTKB|E1C4V5 - symbol:PSMC2 "Uncharacterized protein"... 408 3.7e-44 2
UNIPROTKB|F1NFL8 - symbol:PSMC2 "Uncharacterized protein"... 408 3.7e-44 2
UNIPROTKB|Q5E9F9 - symbol:PSMC2 "26S protease regulatory ... 408 3.7e-44 2
UNIPROTKB|F1PPH7 - symbol:PSMC2 "Uncharacterized protein"... 408 3.7e-44 2
UNIPROTKB|P35998 - symbol:PSMC2 "26S protease regulatory ... 408 3.7e-44 2
UNIPROTKB|F1SB53 - symbol:PSMC2 "Uncharacterized protein"... 408 3.7e-44 2
UNIPROTKB|I3LJ30 - symbol:I3LJ30 "Uncharacterized protein... 408 3.7e-44 2
UNIPROTKB|P46472 - symbol:psmc2 "26S protease regulatory ... 408 3.7e-44 2
UNIPROTKB|Q4R4R0 - symbol:PSMC2 "26S protease regulatory ... 408 3.7e-44 2
UNIPROTKB|Q5R8D7 - symbol:PSMC2 "26S protease regulatory ... 408 3.7e-44 2
MGI|MGI:109555 - symbol:Psmc2 "proteasome (prosome, macro... 408 3.7e-44 2
ZFIN|ZDB-GENE-040426-1327 - symbol:psmc2 "proteasome (pro... 408 3.7e-44 2
TAIR|locus:2024822 - symbol:RPT1A "regulatory particle tr... 407 3.7e-44 2
ASPGD|ASPL0000032311 - symbol:AN5747 species:162425 "Emer... 388 3.7e-44 2
TAIR|locus:2028200 - symbol:AT1G45000 species:3702 "Arabi... 385 3.7e-44 2
ASPGD|ASPL0000049719 - symbol:AN2213 species:162425 "Emer... 380 3.7e-44 2
TAIR|locus:2061639 - symbol:RPT2b "regulatory particle AA... 395 4.7e-44 2
TAIR|locus:2119926 - symbol:RPT2a "regulatory particle AA... 395 4.7e-44 2
UNIPROTKB|B7Z5E2 - symbol:PSMC2 "cDNA FLJ52353, highly si... 403 1.2e-43 2
CGD|CAL0005257 - symbol:RPT2 species:5476 "Candida albica... 378 1.2e-43 2
RGD|3428 - symbol:Psmc2 "proteasome (prosome, macropain) ... 401 2.0e-43 2
UNIPROTKB|Q63347 - symbol:Psmc2 "26S protease regulatory ... 401 2.0e-43 2
CGD|CAL0005689 - symbol:RPT1 species:5476 "Candida albica... 405 3.2e-43 2
POMBASE|SPCC1682.16 - symbol:rpt4 "19S proteasome regulat... 381 4.1e-43 2
DICTYBASE|DDB_G0270784 - symbol:psmC1 "TAT binding protei... 378 4.1e-43 2
WB|WBGene00004504 - symbol:rpt-4 species:6239 "Caenorhabd... 378 4.1e-43 2
UNIPROTKB|O17071 - symbol:rpt-4 "Probable 26S protease re... 378 4.1e-43 2
SGD|S000001628 - symbol:RPT1 "ATPase of the 19S regulator... 400 1.1e-42 2
DICTYBASE|DDB_G0276917 - symbol:psmC2 "26S proteasome ATP... 394 1.1e-42 2
GENEDB_PFALCIPARUM|PF13_0063 - symbol:PF13_0063 "26S prot... 395 1.8e-42 2
UNIPROTKB|Q8IEK3 - symbol:PF13_0063 "26S proteasome regul... 395 1.8e-42 2
GENEDB_PFALCIPARUM|PF13_0033 - symbol:PF13_0033 "26S prot... 373 2.2e-42 2
UNIPROTKB|Q8IEQ1 - symbol:PF13_0033 "26S proteasome regul... 373 2.2e-42 2
FB|FBgn0028685 - symbol:Rpt4 "Regulatory particle triple-... 372 2.2e-42 2
UNIPROTKB|Q9FXT8 - symbol:OsRPT4 "Os02g0199900 protein" s... 371 2.2e-42 2
WARNING: Descriptions of 536 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0020369 [details] [associations]
symbol:Rpt6 "Regulatory particle triple-A ATPase 6"
species:7227 "Drosophila melanogaster" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0004175
"endopeptidase activity" evidence=IDA;NAS] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0005838
"proteasome regulatory particle" evidence=ISS;IDA;NAS] [GO:0000502
"proteasome complex" evidence=NAS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=NAS] [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IDA] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0005875 EMBL:AE014298
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
BRENDA:3.4.25.1 KO:K03066 OMA:QNIKVIM GeneTree:ENSGT00550000074947
EMBL:U97538 EMBL:AF043734 EMBL:AY051732 RefSeq:NP_608447.1
UniGene:Dm.2162 ProteinModelPortal:O18413 SMR:O18413 DIP:DIP-20087N
IntAct:O18413 MINT:MINT-759582 STRING:O18413 PaxDb:O18413
PRIDE:O18413 EnsemblMetazoa:FBtr0077189 GeneID:33105
KEGG:dme:Dmel_CG1489 CTD:33105 FlyBase:FBgn0020369
InParanoid:O18413 OrthoDB:EOG47D7XJ PhylomeDB:O18413
GenomeRNAi:33105 NextBio:781933 Bgee:O18413 GermOnline:CG1489
Uniprot:O18413
Length = 405
Score = 977 (349.0 bits), Expect = 3.9e-110, Sum P(2) = 3.9e-110
Identities = 194/231 (83%), Positives = 200/231 (86%)
Query: 70 MDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLRXXXXXXX 129
M+++ A EGF+ YY+ KIEELQL+VAEK QNLRRLQAQRNELNAKVRMLR
Sbjct: 7 MEIESAYHKGEGFRSYYIQKIEELQLVVAEKHQNLRRLQAQRNELNAKVRMLREELQLLQ 66
Query: 130 XXGSYVGEVVKPMDKKKVLVKVHPEGKFXXXXXXXXXXXXXTPNCRVALRNESYTLHKIL 189
GSYVGEVVKPMDKKKVLVKVHPEGKF TPNCRVALRNESYTLHKIL
Sbjct: 67 EQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDLDKNIDINDVTPNCRVALRNESYTLHKIL 126
Query: 190 PNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVL 249
PNKVDPLVSLMMVEKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELFDALGIAQPKGVL
Sbjct: 127 PNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVL 186
Query: 250 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA
Sbjct: 187 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 237
Score = 226 (84.6 bits), Expect = 7.1e-17, P = 7.1e-17
Identities = 50/68 (73%), Positives = 53/68 (77%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR MD
Sbjct: 193 TGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR----EHAPSIIFMD 248
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 249 EIDSIGSS 256
Score = 131 (51.2 bits), Expect = 3.9e-110, Sum P(2) = 3.9e-110
Identities = 29/49 (59%), Positives = 29/49 (59%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEATK 378
REHAPSIIFM VQRTMLELLNQLDGFEATK
Sbjct: 238 REHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATK 286
>UNIPROTKB|F1NU79 [details] [associations]
symbol:PSMC5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 EMBL:AADN02056696 IPI:IPI00574684
Ensembl:ENSGALT00000000469 Uniprot:F1NU79
Length = 412
Score = 930 (332.4 bits), Expect = 4.5e-105, Sum P(2) = 4.5e-105
Identities = 185/231 (80%), Positives = 198/231 (85%)
Query: 70 MDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLRXXXXXXX 129
M++D+ K G + YY++KIEELQLIV EK QNLRRLQAQRNELNAKVR+LR
Sbjct: 15 MEMDDG-KGGTGLRQYYLSKIEELQLIVNEKSQNLRRLQAQRNELNAKVRLLREELQLLQ 73
Query: 130 XXGSYVGEVVKPMDKKKVLVKVHPEGKFXXXXXXXXXXXXXTPNCRVALRNESYTLHKIL 189
GSYVGEVV+ MDKKKVLVKVHPEGKF TPNCRVALRN+SYTLHKIL
Sbjct: 74 EQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKIL 133
Query: 190 PNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVL 249
PNKVDPLVSLMMVEKVPDSTYEM+GGLD QIKEIKEVIELPVKHPELF+ALGIAQPKGVL
Sbjct: 134 PNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVL 193
Query: 250 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
LYGPPGTGKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMA
Sbjct: 194 LYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMA 244
Score = 220 (82.5 bits), Expect = 4.5e-16, P = 4.5e-16
Identities = 48/68 (70%), Positives = 53/68 (77%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMAR MD
Sbjct: 200 TGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAR----EHAPSIIFMD 255
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 256 EIDSIGSS 263
Score = 130 (50.8 bits), Expect = 4.5e-105, Sum P(2) = 4.5e-105
Identities = 29/49 (59%), Positives = 29/49 (59%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEATK 378
REHAPSIIFM VQRTMLELLNQLDGFEATK
Sbjct: 245 REHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATK 293
>UNIPROTKB|Q6AZU7 [details] [associations]
symbol:Q6AZU7 "Putative uncharacterized protein"
species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0008134 "transcription factor
binding" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0043161
GO:GO:0000502 GO:GO:0017111 GO:GO:0008134 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:BC077223
ProteinModelPortal:Q6AZU7 Uniprot:Q6AZU7
Length = 414
Score = 929 (332.1 bits), Expect = 5.8e-105, Sum P(2) = 5.8e-105
Identities = 186/245 (75%), Positives = 205/245 (83%)
Query: 56 ARCKGSSRGTEFFTMDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELN 115
A K ++ G E M++DE+ + G + YY++KIE+LQL+V +K QNLRRLQAQRNELN
Sbjct: 5 AEYKAAADGME--QMEMDES-RGGTGLRQYYLSKIEDLQLVVNDKSQNLRRLQAQRNELN 61
Query: 116 AKVRMLRXXXXXXXXXGSYVGEVVKPMDKKKVLVKVHPEGKFXXXXXXXXXXXXXTPNCR 175
AKVR+LR GSYVGEVV+ MDKKKVLVKVHPEGKF TPNCR
Sbjct: 62 AKVRLLREELQLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCR 121
Query: 176 VALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPE 235
VALRN+SYTLHKILPNKVDPLVSLMMVEKVPDSTYEM+GGLD QIKEIKEVIELPVKHPE
Sbjct: 122 VALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPE 181
Query: 236 LFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRE 295
LF+ALGIAQPKGVLLYGPPGTGKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRE
Sbjct: 182 LFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRE 241
Query: 296 LFVMA 300
LFVMA
Sbjct: 242 LFVMA 246
Score = 220 (82.5 bits), Expect = 4.6e-16, P = 4.6e-16
Identities = 48/68 (70%), Positives = 53/68 (77%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMAR MD
Sbjct: 202 TGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAR----EHAPSIIFMD 257
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 258 EIDSIGSS 265
Score = 130 (50.8 bits), Expect = 5.8e-105, Sum P(2) = 5.8e-105
Identities = 29/49 (59%), Positives = 29/49 (59%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEATK 378
REHAPSIIFM VQRTMLELLNQLDGFEATK
Sbjct: 247 REHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATK 295
>ZFIN|ZDB-GENE-030131-6547 [details] [associations]
symbol:psmc5 "proteasome (prosome, macropain) 26S
subunit, ATPase, 5" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=IEA;ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-6547 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0043161 GO:GO:0000502 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM CTD:5705
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:CU459020 EMBL:BC078375 IPI:IPI00482097 RefSeq:NP_001003740.1
UniGene:Dr.75934 STRING:Q6AZC1 Ensembl:ENSDART00000106191
GeneID:445285 KEGG:dre:445285 InParanoid:Q6AZC1 NextBio:20832032
Uniprot:Q6AZC1
Length = 406
Score = 929 (332.1 bits), Expect = 5.8e-105, Sum P(2) = 5.8e-105
Identities = 184/231 (79%), Positives = 198/231 (85%)
Query: 70 MDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLRXXXXXXX 129
MD++++ K G + YY++KIEELQL V EK QNLRRLQAQRNELNAKVR+LR
Sbjct: 9 MDIEDS-KGGSGLRQYYLSKIEELQLTVNEKSQNLRRLQAQRNELNAKVRLLREELQLLQ 67
Query: 130 XXGSYVGEVVKPMDKKKVLVKVHPEGKFXXXXXXXXXXXXXTPNCRVALRNESYTLHKIL 189
GSYVGEVV+ MDKKKVLVKVHPEGKF TPNCRVALRN+SYTLHKIL
Sbjct: 68 EQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKIL 127
Query: 190 PNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVL 249
PNKVDPLVSLMMVEKVPDSTYEM+GGLD QIKEIKEVIELPVKHPELF+ALGIAQPKGVL
Sbjct: 128 PNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVL 187
Query: 250 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
LYGPPGTGKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMA
Sbjct: 188 LYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMA 238
Score = 220 (82.5 bits), Expect = 4.3e-16, P = 4.3e-16
Identities = 48/68 (70%), Positives = 53/68 (77%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMAR MD
Sbjct: 194 TGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAR----EHAPSIIFMD 249
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 250 EIDSIGSS 257
Score = 130 (50.8 bits), Expect = 5.8e-105, Sum P(2) = 5.8e-105
Identities = 29/49 (59%), Positives = 29/49 (59%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEATK 378
REHAPSIIFM VQRTMLELLNQLDGFEATK
Sbjct: 239 REHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATK 287
>UNIPROTKB|P62194 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0031531 "thyrotropin-releasing
hormone receptor binding" evidence=ISS] [GO:0008134 "transcription
factor binding" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
EMBL:AF069053 EMBL:BC146195 IPI:IPI00717227 RefSeq:NP_776866.1
UniGene:Bt.8062 ProteinModelPortal:P62194 SMR:P62194 STRING:P62194
PRIDE:P62194 Ensembl:ENSBTAT00000028048 GeneID:282015
KEGG:bta:282015 CTD:5705 GeneTree:ENSGT00550000074947
InParanoid:P62194 OrthoDB:EOG4MKNGF NextBio:20805880
ArrayExpress:P62194 GO:GO:0031531 Uniprot:P62194
Length = 406
Score = 928 (331.7 bits), Expect = 7.3e-105, Sum P(2) = 7.3e-105
Identities = 184/231 (79%), Positives = 199/231 (86%)
Query: 70 MDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLRXXXXXXX 129
M+++E K+ G + YY++KIEELQLIV +K QNLRRLQAQRNELNAKVR+LR
Sbjct: 9 MELEEG-KAGSGLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQ 67
Query: 130 XXGSYVGEVVKPMDKKKVLVKVHPEGKFXXXXXXXXXXXXXTPNCRVALRNESYTLHKIL 189
GSYVGEVV+ MDKKKVLVKVHPEGKF TPNCRVALRN+SYTLHKIL
Sbjct: 68 EQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKIL 127
Query: 190 PNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVL 249
PNKVDPLVSLMMVEKVPDSTYEM+GGLD QIKEIKEVIELPVKHPELF+ALGIAQPKGVL
Sbjct: 128 PNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVL 187
Query: 250 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
LYGPPGTGKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMA
Sbjct: 188 LYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMA 238
Score = 220 (82.5 bits), Expect = 4.3e-16, P = 4.3e-16
Identities = 48/68 (70%), Positives = 53/68 (77%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMAR MD
Sbjct: 194 TGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAR----EHAPSIIFMD 249
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 250 EIDSIGSS 257
Score = 130 (50.8 bits), Expect = 7.3e-105, Sum P(2) = 7.3e-105
Identities = 29/49 (59%), Positives = 29/49 (59%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEATK 378
REHAPSIIFM VQRTMLELLNQLDGFEATK
Sbjct: 239 REHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATK 287
>UNIPROTKB|P62195 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017025 "TBP-class protein binding" evidence=IEA] [GO:0031595
"nuclear proteasome complex" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=TAS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IPI] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0043069 "negative regulation of programmed cell
death" evidence=NAS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0031410 "cytoplasmic vesicle" evidence=IDA]
[GO:0003712 "transcription cofactor activity" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:L38810 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0016071 GO:GO:0045892 Reactome:REACT_115566 GO:GO:0045893
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0031410
GO:GO:0016887 GO:GO:0006366 GO:GO:0043069 GO:GO:0051436
EMBL:CH471109 GO:GO:0003712 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 EMBL:AC015651 ChiTaRS:PSMC5 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 KO:K03066
OMA:QNIKVIM CTD:5705 OrthoDB:EOG4MKNGF EMBL:D44467 EMBL:AK290758
EMBL:AK291878 EMBL:BC001932 EMBL:BC002367 EMBL:AF035309
IPI:IPI00023919 PIR:S60343 PIR:S65536 RefSeq:NP_001186092.1
RefSeq:NP_002796.4 UniGene:Hs.79387 PDB:2KRK PDB:3KW6 PDBsum:2KRK
PDBsum:3KW6 ProteinModelPortal:P62195 SMR:P62195 IntAct:P62195
MINT:MINT-5004394 STRING:P62195 PhosphoSite:P62195 DMDM:49065819
PaxDb:P62195 PRIDE:P62195 DNASU:5705 Ensembl:ENST00000310144
Ensembl:ENST00000375812 Ensembl:ENST00000580864
Ensembl:ENST00000581882 GeneID:5705 KEGG:hsa:5705 UCSC:uc002jcb.3
GeneCards:GC17P061904 HGNC:HGNC:9552 HPA:HPA017871 MIM:601681
neXtProt:NX_P62195 PharmGKB:PA33897 InParanoid:P62195
PhylomeDB:P62195 EvolutionaryTrace:P62195 GenomeRNAi:5705
NextBio:22166 ArrayExpress:P62195 Bgee:P62195 CleanEx:HS_PSMC5
Genevestigator:P62195 GermOnline:ENSG00000087191 Uniprot:P62195
Length = 406
Score = 928 (331.7 bits), Expect = 7.3e-105, Sum P(2) = 7.3e-105
Identities = 184/231 (79%), Positives = 199/231 (86%)
Query: 70 MDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLRXXXXXXX 129
M+++E K+ G + YY++KIEELQLIV +K QNLRRLQAQRNELNAKVR+LR
Sbjct: 9 MELEEG-KAGSGLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQ 67
Query: 130 XXGSYVGEVVKPMDKKKVLVKVHPEGKFXXXXXXXXXXXXXTPNCRVALRNESYTLHKIL 189
GSYVGEVV+ MDKKKVLVKVHPEGKF TPNCRVALRN+SYTLHKIL
Sbjct: 68 EQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKIL 127
Query: 190 PNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVL 249
PNKVDPLVSLMMVEKVPDSTYEM+GGLD QIKEIKEVIELPVKHPELF+ALGIAQPKGVL
Sbjct: 128 PNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVL 187
Query: 250 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
LYGPPGTGKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMA
Sbjct: 188 LYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMA 238
Score = 220 (82.5 bits), Expect = 4.3e-16, P = 4.3e-16
Identities = 48/68 (70%), Positives = 53/68 (77%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMAR MD
Sbjct: 194 TGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAR----EHAPSIIFMD 249
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 250 EIDSIGSS 257
Score = 130 (50.8 bits), Expect = 7.3e-105, Sum P(2) = 7.3e-105
Identities = 29/49 (59%), Positives = 29/49 (59%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEATK 378
REHAPSIIFM VQRTMLELLNQLDGFEATK
Sbjct: 239 REHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATK 287
>UNIPROTKB|P62197 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9823 "Sus scrofa" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0008134 "transcription factor binding"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:X89718 EMBL:X89719 RefSeq:NP_999148.1 UniGene:Ssc.5451
ProteinModelPortal:P62197 SMR:P62197 STRING:P62197 PRIDE:P62197
Ensembl:ENSSSCT00000018819 GeneID:397043 KEGG:ssc:397043 CTD:397043
Uniprot:P62197
Length = 406
Score = 928 (331.7 bits), Expect = 7.3e-105, Sum P(2) = 7.3e-105
Identities = 184/231 (79%), Positives = 199/231 (86%)
Query: 70 MDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLRXXXXXXX 129
M+++E K+ G + YY++KIEELQLIV +K QNLRRLQAQRNELNAKVR+LR
Sbjct: 9 MELEEG-KAGSGLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQ 67
Query: 130 XXGSYVGEVVKPMDKKKVLVKVHPEGKFXXXXXXXXXXXXXTPNCRVALRNESYTLHKIL 189
GSYVGEVV+ MDKKKVLVKVHPEGKF TPNCRVALRN+SYTLHKIL
Sbjct: 68 EQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKIL 127
Query: 190 PNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVL 249
PNKVDPLVSLMMVEKVPDSTYEM+GGLD QIKEIKEVIELPVKHPELF+ALGIAQPKGVL
Sbjct: 128 PNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVL 187
Query: 250 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
LYGPPGTGKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMA
Sbjct: 188 LYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMA 238
Score = 220 (82.5 bits), Expect = 4.3e-16, P = 4.3e-16
Identities = 48/68 (70%), Positives = 53/68 (77%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMAR MD
Sbjct: 194 TGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAR----EHAPSIIFMD 249
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 250 EIDSIGSS 257
Score = 130 (50.8 bits), Expect = 7.3e-105, Sum P(2) = 7.3e-105
Identities = 29/49 (59%), Positives = 29/49 (59%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEATK 378
REHAPSIIFM VQRTMLELLNQLDGFEATK
Sbjct: 239 REHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATK 287
>MGI|MGI:105047 [details] [associations]
symbol:Psmc5 "protease (prosome, macropain) 26S subunit,
ATPase 5" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005102 "receptor binding" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005675 "holo TFIIH complex" evidence=ISA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=ISO;ISA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0017025 "TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=ISO] [GO:0031531 "thyrotropin-releasing hormone receptor
binding" evidence=ISO] [GO:0031595 "nuclear proteasome complex"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:105047
GO:GO:0005524 GO:GO:0005737 GO:GO:0045892 GO:GO:0043161
GO:GO:0031410 GO:GO:0017111 GO:GO:0008134 GO:GO:0005675
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03066 OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947
OrthoDB:EOG4MKNGF GO:GO:0031531 EMBL:Z54219 EMBL:AK010505
EMBL:AK135451 EMBL:AK145703 IPI:IPI00135640 PIR:S61923
RefSeq:NP_032976.1 UniGene:Mm.272361 ProteinModelPortal:P62196
SMR:P62196 IntAct:P62196 STRING:P62196 PhosphoSite:P62196
REPRODUCTION-2DPAGE:IPI00135640 REPRODUCTION-2DPAGE:P62196
PaxDb:P62196 PRIDE:P62196 Ensembl:ENSMUST00000021049 GeneID:19184
KEGG:mmu:19184 InParanoid:P62196 NextBio:295882 Bgee:P62196
Genevestigator:P62196 GermOnline:ENSMUSG00000020708 Uniprot:P62196
Length = 406
Score = 928 (331.7 bits), Expect = 7.3e-105, Sum P(2) = 7.3e-105
Identities = 184/231 (79%), Positives = 199/231 (86%)
Query: 70 MDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLRXXXXXXX 129
M+++E K+ G + YY++KIEELQLIV +K QNLRRLQAQRNELNAKVR+LR
Sbjct: 9 MELEEG-KAGSGLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQ 67
Query: 130 XXGSYVGEVVKPMDKKKVLVKVHPEGKFXXXXXXXXXXXXXTPNCRVALRNESYTLHKIL 189
GSYVGEVV+ MDKKKVLVKVHPEGKF TPNCRVALRN+SYTLHKIL
Sbjct: 68 EQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKIL 127
Query: 190 PNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVL 249
PNKVDPLVSLMMVEKVPDSTYEM+GGLD QIKEIKEVIELPVKHPELF+ALGIAQPKGVL
Sbjct: 128 PNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVL 187
Query: 250 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
LYGPPGTGKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMA
Sbjct: 188 LYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMA 238
Score = 220 (82.5 bits), Expect = 4.3e-16, P = 4.3e-16
Identities = 48/68 (70%), Positives = 53/68 (77%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMAR MD
Sbjct: 194 TGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAR----EHAPSIIFMD 249
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 250 EIDSIGSS 257
Score = 130 (50.8 bits), Expect = 7.3e-105, Sum P(2) = 7.3e-105
Identities = 29/49 (59%), Positives = 29/49 (59%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEATK 378
REHAPSIIFM VQRTMLELLNQLDGFEATK
Sbjct: 239 REHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATK 287
>RGD|708376 [details] [associations]
symbol:Psmc5 "proteasome (prosome, macropain) 26S subunit,
ATPase, 5" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO;ISS] [GO:0005102 "receptor
binding" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO;ISS;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;ISS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0008134 "transcription factor binding" evidence=ISO;ISS]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA;ISO] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISO;ISS] [GO:0031595 "nuclear proteasome
complex" evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:708376 GO:GO:0005524
GO:GO:0005737 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0016887 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066
OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:D83521 EMBL:AB000491 EMBL:AB000493 EMBL:BC058462
IPI:IPI00213587 PIR:T43799 RefSeq:NP_112411.1 UniGene:Rn.10972
ProteinModelPortal:P62198 SMR:P62198 IntAct:P62198 STRING:P62198
PhosphoSite:P62198 World-2DPAGE:0004:P62198 PRIDE:P62198
Ensembl:ENSRNOT00000013997 GeneID:81827 KEGG:rno:81827
UCSC:RGD:708376 InParanoid:P62198 NextBio:615767
ArrayExpress:P62198 Genevestigator:P62198
GermOnline:ENSRNOG00000010038 GO:GO:0031595 Uniprot:P62198
Length = 406
Score = 928 (331.7 bits), Expect = 7.3e-105, Sum P(2) = 7.3e-105
Identities = 184/231 (79%), Positives = 199/231 (86%)
Query: 70 MDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLRXXXXXXX 129
M+++E K+ G + YY++KIEELQLIV +K QNLRRLQAQRNELNAKVR+LR
Sbjct: 9 MELEEG-KAGSGLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQ 67
Query: 130 XXGSYVGEVVKPMDKKKVLVKVHPEGKFXXXXXXXXXXXXXTPNCRVALRNESYTLHKIL 189
GSYVGEVV+ MDKKKVLVKVHPEGKF TPNCRVALRN+SYTLHKIL
Sbjct: 68 EQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKIL 127
Query: 190 PNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVL 249
PNKVDPLVSLMMVEKVPDSTYEM+GGLD QIKEIKEVIELPVKHPELF+ALGIAQPKGVL
Sbjct: 128 PNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVL 187
Query: 250 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
LYGPPGTGKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMA
Sbjct: 188 LYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMA 238
Score = 220 (82.5 bits), Expect = 4.3e-16, P = 4.3e-16
Identities = 48/68 (70%), Positives = 53/68 (77%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMAR MD
Sbjct: 194 TGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAR----EHAPSIIFMD 249
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 250 EIDSIGSS 257
Score = 130 (50.8 bits), Expect = 7.3e-105, Sum P(2) = 7.3e-105
Identities = 29/49 (59%), Positives = 29/49 (59%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEATK 378
REHAPSIIFM VQRTMLELLNQLDGFEATK
Sbjct: 239 REHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATK 287
>UNIPROTKB|Q4RG45 [details] [associations]
symbol:GSTENG00035021001 "Chromosome 2 SCAF15106, whole
genome shotgun sequence." species:99883 "Tetraodon nigroviridis"
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0008134 "transcription factor binding" evidence=ISS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0043161 GO:GO:0000502
GO:GO:0017111 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:CAAE01015106
ProteinModelPortal:Q4RG45 STRING:Q4RG45 Uniprot:Q4RG45
Length = 406
Score = 923 (330.0 bits), Expect = 2.5e-104, Sum P(2) = 2.5e-104
Identities = 185/231 (80%), Positives = 197/231 (85%)
Query: 70 MDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLRXXXXXXX 129
M+V E+ K G + YY++KIEELQL V EK QNLRRLQAQRNELNAKVR+LR
Sbjct: 9 MEVVES-KGGSGLRQYYLSKIEELQLTVNEKSQNLRRLQAQRNELNAKVRLLREELQLLQ 67
Query: 130 XXGSYVGEVVKPMDKKKVLVKVHPEGKFXXXXXXXXXXXXXTPNCRVALRNESYTLHKIL 189
GSYVGEVV+ MDKKKVLVKVHPEGKF TPNCRVALRN+SYTLHKIL
Sbjct: 68 EQGSYVGEVVRVMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKIL 127
Query: 190 PNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVL 249
PNKVDPLVSLMMVEKVPDSTYEM+GGLD QIKEIKEVIELPVKHPELF+ALGIAQPKGVL
Sbjct: 128 PNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVL 187
Query: 250 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
LYGPPGTGKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMA
Sbjct: 188 LYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMA 238
Score = 220 (82.5 bits), Expect = 4.3e-16, P = 4.3e-16
Identities = 48/68 (70%), Positives = 53/68 (77%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMAR MD
Sbjct: 194 TGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAR----EHAPSIIFMD 249
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 250 EIDSIGSS 257
Score = 130 (50.8 bits), Expect = 2.5e-104, Sum P(2) = 2.5e-104
Identities = 29/49 (59%), Positives = 29/49 (59%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEATK 378
REHAPSIIFM VQRTMLELLNQLDGFEATK
Sbjct: 239 REHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATK 287
>UNIPROTKB|Q6P380 [details] [associations]
symbol:psmc5 "Putative uncharacterized protein MGC75584"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0043161 GO:GO:0000502 GO:GO:0017111 GO:GO:0008134
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 CTD:5705 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:BC064153 RefSeq:NP_989358.1 UniGene:Str.3783
ProteinModelPortal:Q6P380 STRING:Q6P380 GeneID:394988
KEGG:xtr:394988 Xenbase:XB-GENE-999928 InParanoid:Q6P380
Uniprot:Q6P380
Length = 414
Score = 922 (329.6 bits), Expect = 3.2e-104, Sum P(2) = 3.2e-104
Identities = 182/231 (78%), Positives = 199/231 (86%)
Query: 70 MDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLRXXXXXXX 129
M++DE+ + G + YY++KIE+LQL+V +K QNLRRLQAQRNELNAKVR+LR
Sbjct: 17 MEMDES-RGGIGLRQYYLSKIEDLQLVVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQ 75
Query: 130 XXGSYVGEVVKPMDKKKVLVKVHPEGKFXXXXXXXXXXXXXTPNCRVALRNESYTLHKIL 189
GSYVGEVV+ MDKKKVLVKVHPEGKF TPNCRVALRN+SYTLHKIL
Sbjct: 76 EQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNDSYTLHKIL 135
Query: 190 PNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVL 249
PNKVDPLVSLMMVEKVPDSTYEM+GGLD QIKEIKEVIELPVKHPELF+ALGIAQPKGVL
Sbjct: 136 PNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVL 195
Query: 250 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
LYGPPGTGKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMA
Sbjct: 196 LYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMA 246
Score = 220 (82.5 bits), Expect = 4.6e-16, P = 4.6e-16
Identities = 48/68 (70%), Positives = 53/68 (77%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMAR MD
Sbjct: 202 TGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAR----EHAPSIIFMD 257
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 258 EIDSIGSS 265
Score = 130 (50.8 bits), Expect = 3.2e-104, Sum P(2) = 3.2e-104
Identities = 29/49 (59%), Positives = 29/49 (59%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEATK 378
REHAPSIIFM VQRTMLELLNQLDGFEATK
Sbjct: 247 REHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATK 295
>UNIPROTKB|P46470 [details] [associations]
symbol:psmc5 "26S protease regulatory subunit 8"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 KO:K03066 CTD:5705 EMBL:X81986 RefSeq:NP_001081635.1
UniGene:Xl.45 ProteinModelPortal:P46470 PRIDE:P46470 GeneID:397968
KEGG:xla:397968 Uniprot:P46470
Length = 461
Score = 917 (327.9 bits), Expect = 9.5e-103, Sum P(2) = 9.5e-103
Identities = 181/231 (78%), Positives = 198/231 (85%)
Query: 70 MDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLRXXXXXXX 129
M++DE+ + G + YY++KIE+LQL+V +K QNLRRLQAQRNELNAKVR+LR
Sbjct: 4 MEMDES-RGGTGLRQYYLSKIEDLQLVVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQ 62
Query: 130 XXGSYVGEVVKPMDKKKVLVKVHPEGKFXXXXXXXXXXXXXTPNCRVALRNESYTLHKIL 189
GSYVGEVV+ MDKKKVLVKVHPEGKF TPNCRVALRN+SYTLHKIL
Sbjct: 63 EQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKIL 122
Query: 190 PNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVL 249
PNKVDPLVSLMMVEKVPDSTYEM+GGLD QIKEIKEVIELPVKHPE F+ALGIAQPKGVL
Sbjct: 123 PNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPEHFEALGIAQPKGVL 182
Query: 250 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
LYGPPGTGKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMA
Sbjct: 183 LYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMA 233
Score = 219 (82.2 bits), Expect = 9.3e-25, Sum P(2) = 9.3e-25
Identities = 43/46 (93%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMAR
Sbjct: 189 TGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAR 234
Score = 121 (47.7 bits), Expect = 9.5e-103, Sum P(2) = 9.5e-103
Identities = 29/49 (59%), Positives = 29/49 (59%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEATK 378
REHAPSIIFM VQRTMLELLNQLDGFEATK
Sbjct: 234 REHAPSIIFMDEIDSIGSRLEGGSGGDSE-VQRTMLELLNQLDGFEATK 281
>FB|FBgn0039788 [details] [associations]
symbol:Rpt6R "Regulatory particle triple-A ATPase 6-related"
species:7227 "Drosophila melanogaster" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:AE014297 GO:GO:0005524 GO:GO:0005737 GO:GO:0005875
GO:GO:0022008 GO:GO:0006200 GO:GO:0016887 GO:GO:0030163 HSSP:Q01853
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
GeneTree:ENSGT00550000074947 EMBL:AY119229 RefSeq:NP_651811.1
UniGene:Dm.13760 SMR:Q9VA54 IntAct:Q9VA54 MINT:MINT-308887
STRING:Q9VA54 EnsemblMetazoa:FBtr0085680 GeneID:43635
KEGG:dme:Dmel_CG2241 UCSC:CG2241-RA CTD:43635 FlyBase:FBgn0039788
InParanoid:Q9VA54 OMA:NDAYSAG OrthoDB:EOG41JWTK GenomeRNAi:43635
NextBio:834976 Uniprot:Q9VA54
Length = 399
Score = 885 (316.6 bits), Expect = 1.4e-99, Sum P(2) = 1.4e-99
Identities = 179/232 (77%), Positives = 189/232 (81%)
Query: 70 MDVDEAI-KSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLRXXXXXX 128
M D I + SEGF YY KI ELQ V E+++NL RLQAQRNELN KVR+LR
Sbjct: 1 MSKDVGIPEGSEGFHSYYTQKISELQFTVNERQKNLLRLQAQRNELNLKVRLLREELQLL 60
Query: 129 XXXGSYVGEVVKPMDKKKVLVKVHPEGKFXXXXXXXXXXXXXTPNCRVALRNESYTLHKI 188
GSY+ EVVKPMDK KVLVKVHPEGK+ TP+ RVALRNESYTLHKI
Sbjct: 61 QEQGSYIAEVVKPMDKNKVLVKVHPEGKYVVDVDKTINIKDVTPSSRVALRNESYTLHKI 120
Query: 189 LPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGV 248
LPNKVDPLVSLM+VEKVPDSTYEMVGGLD QI+EIKEVIELPVKHPELFDALGI QPKGV
Sbjct: 121 LPNKVDPLVSLMLVEKVPDSTYEMVGGLDKQIQEIKEVIELPVKHPELFDALGITQPKGV 180
Query: 249 LLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
LLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA
Sbjct: 181 LLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 232
Score = 225 (84.3 bits), Expect = 2.9e-26, Sum P(2) = 2.9e-26
Identities = 45/46 (97%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR
Sbjct: 188 TGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 233
Score = 123 (48.4 bits), Expect = 1.4e-99, Sum P(2) = 1.4e-99
Identities = 29/49 (59%), Positives = 29/49 (59%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEATK 378
REHAPSIIFM VQRTMLELLNQLDGFEATK
Sbjct: 233 REHAPSIIFMDEIDSIGSARLETGTGDSE-VQRTMLELLNQLDGFEATK 280
>UNIPROTKB|J3QQM1 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 EMBL:AC015651 ChiTaRS:PSMC5
HGNC:HGNC:9552 Ensembl:ENST00000582130 Uniprot:J3QQM1
Length = 263
Score = 647 (232.8 bits), Expect = 9.0e-99, Sum P(3) = 9.0e-99
Identities = 124/130 (95%), Positives = 129/130 (99%)
Query: 171 TPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELP 230
TPNCRVALRN+SYTLHKILPNKVDPLVSLMMVEKVPDSTYEM+GGLD QIKEIKEVIELP
Sbjct: 90 TPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELP 149
Query: 231 VKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGS 290
VKHPELF+ALGIAQPKGVLLYGPPGTGKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+
Sbjct: 150 VKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGA 209
Query: 291 RMVRELFVMA 300
RMVRELFVMA
Sbjct: 210 RMVRELFVMA 219
Score = 262 (97.3 bits), Expect = 9.0e-99, Sum P(3) = 9.0e-99
Identities = 55/84 (65%), Positives = 65/84 (77%)
Query: 70 MDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLRXXXXXXX 129
M+++E K+ G + YY++KIEELQLIV +K QNLRRLQAQRNELNAKVR+LR
Sbjct: 9 MELEEG-KAGSGLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQ 67
Query: 130 XXGSYVGEVVKPMDKKKVLVKVHP 153
GSYVGEVV+ MDKKKVLVKV P
Sbjct: 68 EQGSYVGEVVRAMDKKKVLVKVTP 91
Score = 220 (82.5 bits), Expect = 4.0e-18, P = 4.0e-18
Identities = 48/68 (70%), Positives = 53/68 (77%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMAR MD
Sbjct: 175 TGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAR----EHAPSIIFMD 230
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 231 EIDSIGSS 238
Score = 105 (42.0 bits), Expect = 9.0e-99, Sum P(3) = 9.0e-99
Identities = 24/44 (54%), Positives = 24/44 (54%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDG 373
REHAPSIIFM VQRTMLELLNQLDG
Sbjct: 220 REHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDG 263
>UNIPROTKB|J3QSA9 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005102 "receptor binding" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IEA] [GO:0017025 "TBP-class protein binding"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0031595 "nuclear proteasome complex"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
Pfam:PF00004 SMART:SM00382 GO:GO:0005524 GO:GO:0017111
EMBL:AC015651 ChiTaRS:PSMC5 HGNC:HGNC:9552 Ensembl:ENST00000585123
Uniprot:J3QSA9
Length = 257
Score = 928 (331.7 bits), Expect = 1.3e-96, Sum P(2) = 1.3e-96
Identities = 184/231 (79%), Positives = 199/231 (86%)
Query: 70 MDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLRXXXXXXX 129
M+++E K+ G + YY++KIEELQLIV +K QNLRRLQAQRNELNAKVR+LR
Sbjct: 1 MELEEG-KAGSGLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQ 59
Query: 130 XXGSYVGEVVKPMDKKKVLVKVHPEGKFXXXXXXXXXXXXXTPNCRVALRNESYTLHKIL 189
GSYVGEVV+ MDKKKVLVKVHPEGKF TPNCRVALRN+SYTLHKIL
Sbjct: 60 EQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKIL 119
Query: 190 PNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVL 249
PNKVDPLVSLMMVEKVPDSTYEM+GGLD QIKEIKEVIELPVKHPELF+ALGIAQPKGVL
Sbjct: 120 PNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVL 179
Query: 250 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
LYGPPGTGKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMA
Sbjct: 180 LYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMA 230
Score = 220 (82.5 bits), Expect = 4.0e-18, P = 4.0e-18
Identities = 48/68 (70%), Positives = 53/68 (77%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMAR MD
Sbjct: 186 TGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAR----EHAPSIIFMD 241
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 242 EIDSIGSS 249
Score = 52 (23.4 bits), Expect = 1.3e-96, Sum P(2) = 1.3e-96
Identities = 10/10 (100%), Positives = 10/10 (100%)
Query: 330 REHAPSIIFM 339
REHAPSIIFM
Sbjct: 231 REHAPSIIFM 240
>UNIPROTKB|J3KRP2 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005102 "receptor binding" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IEA] [GO:0017025 "TBP-class protein binding"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0031595 "nuclear proteasome complex"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR003959 Pfam:PF00004
GO:GO:0005524 EMBL:AC015651 ChiTaRS:PSMC5 HGNC:HGNC:9552
Ensembl:ENST00000584320 Uniprot:J3KRP2
Length = 241
Score = 928 (331.7 bits), Expect = 1.3e-96, Sum P(2) = 1.3e-96
Identities = 184/231 (79%), Positives = 199/231 (86%)
Query: 70 MDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLRXXXXXXX 129
M+++E K+ G + YY++KIEELQLIV +K QNLRRLQAQRNELNAKVR+LR
Sbjct: 1 MELEEG-KAGSGLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQ 59
Query: 130 XXGSYVGEVVKPMDKKKVLVKVHPEGKFXXXXXXXXXXXXXTPNCRVALRNESYTLHKIL 189
GSYVGEVV+ MDKKKVLVKVHPEGKF TPNCRVALRN+SYTLHKIL
Sbjct: 60 EQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKIL 119
Query: 190 PNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVL 249
PNKVDPLVSLMMVEKVPDSTYEM+GGLD QIKEIKEVIELPVKHPELF+ALGIAQPKGVL
Sbjct: 120 PNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVL 179
Query: 250 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
LYGPPGTGKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMA
Sbjct: 180 LYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMA 230
Score = 219 (82.2 bits), Expect = 6.4e-22, Sum P(2) = 6.4e-22
Identities = 43/46 (93%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMAR
Sbjct: 186 TGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAR 231
Score = 52 (23.4 bits), Expect = 1.3e-96, Sum P(2) = 1.3e-96
Identities = 10/10 (100%), Positives = 10/10 (100%)
Query: 330 REHAPSIIFM 339
REHAPSIIFM
Sbjct: 231 REHAPSIIFM 240
>WB|WBGene00004506 [details] [associations]
symbol:rpt-6 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0007091 "metaphase/anaphase transition of mitotic cell cycle"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0040011 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:Z98866
GO:GO:0007091 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
PIR:T27048 RefSeq:NP_499609.1 ProteinModelPortal:Q9XTT9 SMR:Q9XTT9
DIP:DIP-27139N IntAct:Q9XTT9 MINT:MINT-210855 STRING:Q9XTT9
PaxDb:Q9XTT9 EnsemblMetazoa:Y49E10.1.1 EnsemblMetazoa:Y49E10.1.2
GeneID:176661 KEGG:cel:CELE_Y49E10.1 UCSC:Y49E10.1 CTD:176661
WormBase:Y49E10.1 InParanoid:Q9XTT9 OMA:IDDQIRE NextBio:893504
Uniprot:Q9XTT9
Length = 416
Score = 838 (300.0 bits), Expect = 1.8e-95, Sum P(2) = 1.8e-95
Identities = 167/218 (76%), Positives = 180/218 (82%)
Query: 83 KPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPM 142
+ Y+ TK+++ Q VA+K QN+RRLQAQRNELN KVRML+ GSYVGEV K M
Sbjct: 31 RKYFSTKVDDAQQKVADKSQNVRRLQAQRNELNTKVRMLKEELQQLHEQGSYVGEVSKAM 90
Query: 143 DKKKVLVKVHPEGKFXXXXXXXXXXXXXTPNCRVALRNESYTLHKILPNKVDPLVSLMMV 202
DKKKVLVKVHPEGK+ RVALR +SY LHK+LPNKVDPLVSLMMV
Sbjct: 91 DKKKVLVKVHPEGKYVVDVDKSIDINSLNTGARVALRADSYALHKLLPNKVDPLVSLMMV 150
Query: 203 EKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 262
EKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELFDALGIAQPKGVLL+GPPGTGKTLLA
Sbjct: 151 EKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLFGPPGTGKTLLA 210
Query: 263 RAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
RAVAHHTECTFIRVSGSELVQKFIGEG+RMVRELFVMA
Sbjct: 211 RAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMA 248
Score = 223 (83.6 bits), Expect = 1.9e-16, P = 1.9e-16
Identities = 49/68 (72%), Positives = 53/68 (77%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHTECTFIRVSGSELVQKFIGEG+RMVRELFVMAR MD
Sbjct: 204 TGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMAR----EHAPSIIFMD 259
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 260 EIDSIGSS 267
Score = 131 (51.2 bits), Expect = 1.8e-95, Sum P(2) = 1.8e-95
Identities = 29/49 (59%), Positives = 29/49 (59%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEATK 378
REHAPSIIFM VQRTMLELLNQLDGFEATK
Sbjct: 249 REHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFEATK 297
>DICTYBASE|DDB_G0292382 [details] [associations]
symbol:psmC5 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0005838 "proteasome regulatory particle"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0292382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GenomeReviews:CM000155_GR GO:GO:0006508 GO:GO:0004175 GO:GO:0030163
GO:GO:0017111 EMBL:AAFI02000190 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0005838 KO:K03066 EMBL:L16579 PIR:JN0610 RefSeq:XP_629632.1
ProteinModelPortal:P34124 STRING:P34124 EnsemblProtists:DDB0216230
GeneID:8628696 KEGG:ddi:DDB_G0292382 OMA:RAALKHE
ProtClustDB:CLSZ2429412 Uniprot:P34124
Length = 403
Score = 822 (294.4 bits), Expect = 1.6e-92, Sum P(2) = 1.6e-92
Identities = 161/222 (72%), Positives = 185/222 (83%)
Query: 79 SEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEV 138
++G K YY +KIEEL++ V EK Q+LRRL+AQRNELN +VRML+ GS+V EV
Sbjct: 13 TKGIKSYYCSKIEELEIKVNEKAQDLRRLEAQRNELNNRVRMLKEELQLLTNPGSHVAEV 72
Query: 139 VKPMDKKKVLVKVHPEGKFXXXXXXXXXXXXXTPNCRVALRNESYTLHKILPNKVDPLVS 198
VK M K KVLVKV+PEGKF TP+ R AL++ESYTLH+ILPNK+DPLVS
Sbjct: 73 VKLMGKNKVLVKVNPEGKFVVDIDPTVDIAKLTPSTRAALKHESYTLHRILPNKIDPLVS 132
Query: 199 LMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGK 258
LM VEK+PDSTY+MVGGLD QIKEIKEVIELP+KHPELF++LGIAQPKGVLLYGPPGTGK
Sbjct: 133 LMKVEKIPDSTYDMVGGLDKQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGK 192
Query: 259 TLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
TLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELF+MA
Sbjct: 193 TLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFIMA 234
Score = 225 (84.3 bits), Expect = 9.7e-17, P = 9.7e-17
Identities = 48/70 (68%), Positives = 54/70 (77%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELF+MAR MD
Sbjct: 190 TGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFIMAR----EHAPSIIFMD 245
Query: 72 VDEAIKSSEG 81
++I SS G
Sbjct: 246 EIDSIGSSRG 255
Score = 119 (46.9 bits), Expect = 1.6e-92, Sum P(2) = 1.6e-92
Identities = 28/50 (56%), Positives = 29/50 (58%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXX-VQRTMLELLNQLDGFEATK 378
REHAPSIIFM VQRTMLELLNQLDGFE+TK
Sbjct: 235 REHAPSIIFMDEIDSIGSSRGESGSGGGDSEVQRTMLELLNQLDGFESTK 284
>POMBASE|SPBC23G7.12c [details] [associations]
symbol:rpt6 "19S proteasome regulatory subunit Rpt6
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005635
"nuclear envelope" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0007346 "regulation of mitotic cell
cycle" evidence=IC] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC23G7.12c GO:GO:0005829 GO:GO:0005524
GO:GO:0007346 GO:GO:0005635 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 KO:K03066
OMA:TEILRIH EMBL:U02280 PIR:S45176 RefSeq:NP_595870.1
ProteinModelPortal:P41836 IntAct:P41836 STRING:P41836 PRIDE:P41836
EnsemblFungi:SPBC23G7.12c.1 GeneID:2540487 KEGG:spo:SPBC23G7.12c
OrthoDB:EOG44N21J NextBio:20801614 Uniprot:P41836
Length = 403
Score = 817 (292.7 bits), Expect = 1.6e-92, Sum P(2) = 1.6e-92
Identities = 161/225 (71%), Positives = 182/225 (80%)
Query: 76 IKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYV 135
++S+E YY KI++ +L + +K QNLRRL+AQRN LNA+VR+LR GSYV
Sbjct: 10 LQSNENIVQYYTQKIQDAELAILQKTQNLRRLEAQRNGLNARVRLLREEIQLLQEPGSYV 69
Query: 136 GEVVKPMDKKKVLVKVHPEGKFXXXXXXXXXXXXXTPNCRVALRNESYTLHKILPNKVDP 195
GEV+K M K KVLVKVHPEGK+ PN RVALRN+SY L KILPNKVDP
Sbjct: 70 GEVIKTMGKNKVLVKVHPEGKYVVDISPDIDIKEIKPNIRVALRNDSYQLIKILPNKVDP 129
Query: 196 LVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPG 255
LVSLMMVEK+PDSTYEMVGGL+ QIKEIKEVIELPVKHPELF++LGI QPKG+LLYGPPG
Sbjct: 130 LVSLMMVEKIPDSTYEMVGGLEKQIKEIKEVIELPVKHPELFESLGIPQPKGILLYGPPG 189
Query: 256 TGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
TGKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 190 TGKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMA 234
Score = 214 (80.4 bits), Expect = 2.3e-15, P = 2.3e-15
Identities = 47/68 (69%), Positives = 52/68 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMAR MD
Sbjct: 190 TGKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAR----EHAPSIIFMD 245
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 246 EIDSIGSS 253
Score = 124 (48.7 bits), Expect = 1.6e-92, Sum P(2) = 1.6e-92
Identities = 29/50 (58%), Positives = 29/50 (58%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXX-VQRTMLELLNQLDGFEATK 378
REHAPSIIFM VQRTMLELLNQLDGFEATK
Sbjct: 235 REHAPSIIFMDEIDSIGSSRSDSSGGSGDSEVQRTMLELLNQLDGFEATK 284
>TAIR|locus:2147670 [details] [associations]
symbol:RPT6A "regulatory particle triple-A ATPase 6A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AF296836
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123395 EMBL:AB044348 EMBL:AY065174 EMBL:BT009668
IPI:IPI00542662 RefSeq:NP_568389.1 UniGene:At.10507
ProteinModelPortal:Q9C5U3 SMR:Q9C5U3 IntAct:Q9C5U3 STRING:Q9C5U3
PaxDb:Q9C5U3 PRIDE:Q9C5U3 EnsemblPlants:AT5G19990.1 GeneID:832121
KEGG:ath:AT5G19990 TAIR:At5g19990 InParanoid:Q9C5U3 KO:K03066
OMA:QNIKVIM PhylomeDB:Q9C5U3 ProtClustDB:CLSN2687185 Uniprot:Q9C5U3
Length = 419
Score = 826 (295.8 bits), Expect = 2.7e-92, Sum P(2) = 2.7e-92
Identities = 163/226 (72%), Positives = 182/226 (80%)
Query: 75 AIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSY 134
A K EG K YY+ I ELQ + +K NL RL+AQRNELN++VRMLR GSY
Sbjct: 25 AAKQGEGLKQYYLQHIHELQRQLRQKTNNLNRLEAQRNELNSRVRMLREELQLLQEPGSY 84
Query: 135 VGEVVKPMDKKKVLVKVHPEGKFXXXXXXXXXXXXXTPNCRVALRNESYTLHKILPNKVD 194
VGEVVK M K KVLVKVHPEGK+ TP+ RVALRN+SY LH +LP+KVD
Sbjct: 85 VGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYVLHLVLPSKVD 144
Query: 195 PLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPP 254
PLV+LM VEKVPDSTY+M+GGLD QIKEIKEVIELP+KHPELF++LGIAQPKGVLLYGPP
Sbjct: 145 PLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPP 204
Query: 255 GTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
GTGKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 205 GTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMA 250
Score = 219 (82.2 bits), Expect = 3.6e-24, Sum P(2) = 3.6e-24
Identities = 43/46 (93%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMAR
Sbjct: 206 TGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAR 251
Score = 113 (44.8 bits), Expect = 2.7e-92, Sum P(2) = 2.7e-92
Identities = 27/49 (55%), Positives = 28/49 (57%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXX-VQRTMLELLNQLDGFEAT 377
REHAPSIIFM VQRTMLELLNQLDGFEA+
Sbjct: 251 REHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEAS 299
>TAIR|locus:2147685 [details] [associations]
symbol:AT5G20000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
GO:GO:0017111 EMBL:AF296836 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 ProtClustDB:CLSN2687185
EMBL:AY039965 EMBL:AY079403 EMBL:AK226206 EMBL:AY087503
IPI:IPI00530138 RefSeq:NP_197500.1 UniGene:At.51251
ProteinModelPortal:Q94BQ2 SMR:Q94BQ2 IntAct:Q94BQ2 STRING:Q94BQ2
PaxDb:Q94BQ2 PRIDE:Q94BQ2 EnsemblPlants:AT5G20000.1 GeneID:832122
KEGG:ath:AT5G20000 GeneFarm:1515 TAIR:At5g20000 InParanoid:Q94BQ2
OMA:TEILRIH PhylomeDB:Q94BQ2 Uniprot:Q94BQ2
Length = 419
Score = 826 (295.8 bits), Expect = 2.7e-92, Sum P(2) = 2.7e-92
Identities = 162/226 (71%), Positives = 182/226 (80%)
Query: 75 AIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSY 134
A K EG YY+ ++ELQ + EK NL RL+AQRNELN++VRMLR GSY
Sbjct: 25 AAKQGEGLNKYYLQHLDELQRLQREKSYNLNRLEAQRNELNSRVRMLREELQLLQEPGSY 84
Query: 135 VGEVVKPMDKKKVLVKVHPEGKFXXXXXXXXXXXXXTPNCRVALRNESYTLHKILPNKVD 194
VGEVVK M K KVLVKVHPEGK+ TP+ RVALRN+SY LH +LP+KVD
Sbjct: 85 VGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKLTPSTRVALRNDSYVLHLVLPSKVD 144
Query: 195 PLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPP 254
PLV+LM VEKVPDSTY+M+GGLD QIKEIKEVIELP+KHPELF++LGIAQPKGVLLYGPP
Sbjct: 145 PLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPP 204
Query: 255 GTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
GTGKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 205 GTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMA 250
Score = 219 (82.2 bits), Expect = 3.6e-24, Sum P(2) = 3.6e-24
Identities = 43/46 (93%), Positives = 46/46 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMAR
Sbjct: 206 TGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAR 251
Score = 113 (44.8 bits), Expect = 2.7e-92, Sum P(2) = 2.7e-92
Identities = 27/49 (55%), Positives = 28/49 (57%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXX-VQRTMLELLNQLDGFEAT 377
REHAPSIIFM VQRTMLELLNQLDGFEA+
Sbjct: 251 REHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEAS 299
>WB|WBGene00018991 [details] [associations]
symbol:F56F11.4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0040017 "positive
regulation of locomotion" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0009792 GO:GO:0005737 GO:GO:0040007 GO:GO:0002119
GO:GO:0040011 GO:GO:0040017 GO:GO:0040035 GO:GO:0030163 HSSP:Q01853
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
EMBL:FO081497 RefSeq:NP_741098.1 ProteinModelPortal:Q8MXF1
SMR:Q8MXF1 STRING:Q8MXF1 PaxDb:Q8MXF1 PRIDE:Q8MXF1
EnsemblMetazoa:F56F11.4b GeneID:175403 KEGG:cel:CELE_F56F11.4
UCSC:F56F11.4b CTD:175403 WormBase:F56F11.4b InParanoid:Q8MXF1
OMA:TITISEN NextBio:888008 ArrayExpress:Q8MXF1 Uniprot:Q8MXF1
Length = 432
Score = 808 (289.5 bits), Expect = 3.4e-92, Sum P(2) = 3.4e-92
Identities = 159/227 (70%), Positives = 180/227 (79%)
Query: 74 EAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGS 133
+A + +PY+ TK+E+ + VAEK N+RRL AQ+ ELN KVR+L+ GS
Sbjct: 38 DANSDEQTLRPYFKTKVEQAEQTVAEKSINVRRLMAQQKELNGKVRLLKEEISHLHEQGS 97
Query: 134 YVGEVVKPMDKKKVLVKVHPEGKFXXXXXXXXXXXXXTPNCRVALRNESYTLHKILPNKV 193
+VGEV K MDKKKVLVK HP+GK+ RVALR ++Y +H++LP+KV
Sbjct: 98 HVGEVCKAMDKKKVLVKNHPDGKYIVDVAASVDISTLAAGTRVALRADNYAIHEVLPSKV 157
Query: 194 DPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGP 253
DPLVSLMMVEKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGP
Sbjct: 158 DPLVSLMMVEKVPDSTYEMVGGLDTQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGP 217
Query: 254 PGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
PGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEG+RMVRELFVMA
Sbjct: 218 PGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMA 264
Score = 223 (83.6 bits), Expect = 2.2e-16, P = 2.2e-16
Identities = 49/68 (72%), Positives = 53/68 (77%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHTECTFIRVSGSELVQKFIGEG+RMVRELFVMAR MD
Sbjct: 220 TGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMAR----EHAPSIIFMD 275
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 276 EIDSIGSS 283
Score = 130 (50.8 bits), Expect = 3.4e-92, Sum P(2) = 3.4e-92
Identities = 29/49 (59%), Positives = 29/49 (59%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEATK 378
REHAPSIIFM VQRTMLELLNQLDGFEATK
Sbjct: 265 REHAPSIIFMDEIDSIGSSRVEGSRGGDSEVQRTMLELLNQLDGFEATK 313
>GENEDB_PFALCIPARUM|PFL2345c [details] [associations]
symbol:PFL2345c "tat-binding protein homolog"
species:5833 "Plasmodium falciparum" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0003712 "transcription cofactor activity" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014188
GO:GO:0006511 HSSP:Q01853 GO:GO:0017111 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM ProtClustDB:CLSZ2429412
RefSeq:XP_001350873.1 ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5
MINT:MINT-1544609 PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA
GeneID:811521 KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900
Uniprot:Q8I4U5
Length = 435
Score = 810 (290.2 bits), Expect = 2.1e-90, Sum P(2) = 2.1e-90
Identities = 161/228 (70%), Positives = 184/228 (80%)
Query: 73 DEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLRXXXXXXXXXG 132
+E ++S G K YY KIEE + I+ +K QN +RL+AQRNELNA+VR L
Sbjct: 43 EEQVQS--GIKRYYELKIEEYESIINKKLQNKKRLEAQRNELNARVRELCDEIQYLLEAA 100
Query: 133 SYVGEVVKPMDKKKVLVKVHPEGKFXXXXXXXXXXXXXTPNCRVALRNESYTLHKILPNK 192
SYVGE+VKPM K KVLVK++PEGK+ TPN RVAL N+SY LHKILP+K
Sbjct: 101 SYVGEIVKPMGKNKVLVKINPEGKYVVDIARHINISHCTPNTRVALYNDSYKLHKILPSK 160
Query: 193 VDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYG 252
VDPLVSLM VEKVPDSTYEMVGGLD Q+KE+KEVIELPVKHPE+F++LGI+QPKGVLLYG
Sbjct: 161 VDPLVSLMKVEKVPDSTYEMVGGLDQQVKEVKEVIELPVKHPEIFESLGISQPKGVLLYG 220
Query: 253 PPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
PPGTGKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 221 PPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMA 268
Score = 224 (83.9 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 56/99 (56%), Positives = 66/99 (66%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMAR S F +
Sbjct: 224 TGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSI---IFMDE 280
Query: 72 VD----EAIKSSEGFKPYYVTKIEEL-QLIVAEKEQNLR 105
+D + I+ G T +E L QL E QN++
Sbjct: 281 IDSIGSQRIEGEHGDSEVQRTMMELLNQLDGFESTQNIK 319
Score = 111 (44.1 bits), Expect = 2.1e-90, Sum P(2) = 2.1e-90
Identities = 26/49 (53%), Positives = 29/49 (59%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEATK 378
REHAPSIIFM VQRTM+ELLNQLDGFE+T+
Sbjct: 269 REHAPSIIFMDEIDSIGSQRIEGEHGDSE-VQRTMMELLNQLDGFESTQ 316
>UNIPROTKB|Q8I4U5 [details] [associations]
symbol:PFL2345c "Tat-binding protein homolog" species:36329
"Plasmodium falciparum 3D7" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:AE014188 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
ProtClustDB:CLSZ2429412 RefSeq:XP_001350873.1
ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5 MINT:MINT-1544609
PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA GeneID:811521
KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900 Uniprot:Q8I4U5
Length = 435
Score = 810 (290.2 bits), Expect = 2.1e-90, Sum P(2) = 2.1e-90
Identities = 161/228 (70%), Positives = 184/228 (80%)
Query: 73 DEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLRXXXXXXXXXG 132
+E ++S G K YY KIEE + I+ +K QN +RL+AQRNELNA+VR L
Sbjct: 43 EEQVQS--GIKRYYELKIEEYESIINKKLQNKKRLEAQRNELNARVRELCDEIQYLLEAA 100
Query: 133 SYVGEVVKPMDKKKVLVKVHPEGKFXXXXXXXXXXXXXTPNCRVALRNESYTLHKILPNK 192
SYVGE+VKPM K KVLVK++PEGK+ TPN RVAL N+SY LHKILP+K
Sbjct: 101 SYVGEIVKPMGKNKVLVKINPEGKYVVDIARHINISHCTPNTRVALYNDSYKLHKILPSK 160
Query: 193 VDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYG 252
VDPLVSLM VEKVPDSTYEMVGGLD Q+KE+KEVIELPVKHPE+F++LGI+QPKGVLLYG
Sbjct: 161 VDPLVSLMKVEKVPDSTYEMVGGLDQQVKEVKEVIELPVKHPEIFESLGISQPKGVLLYG 220
Query: 253 PPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
PPGTGKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 221 PPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMA 268
Score = 224 (83.9 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 56/99 (56%), Positives = 66/99 (66%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMAR S F +
Sbjct: 224 TGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSI---IFMDE 280
Query: 72 VD----EAIKSSEGFKPYYVTKIEEL-QLIVAEKEQNLR 105
+D + I+ G T +E L QL E QN++
Sbjct: 281 IDSIGSQRIEGEHGDSEVQRTMMELLNQLDGFESTQNIK 319
Score = 111 (44.1 bits), Expect = 2.1e-90, Sum P(2) = 2.1e-90
Identities = 26/49 (53%), Positives = 29/49 (59%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEATK 378
REHAPSIIFM VQRTM+ELLNQLDGFE+T+
Sbjct: 269 REHAPSIIFMDEIDSIGSQRIEGEHGDSE-VQRTMMELLNQLDGFESTQ 316
>CGD|CAL0006022 [details] [associations]
symbol:RPT6 species:5476 "Candida albicans" [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051091 "positive regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 CGD:CAL0006022
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:AACQ01000103 eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
RefSeq:XP_714440.1 ProteinModelPortal:Q59Y56 STRING:Q59Y56
GeneID:3643877 KEGG:cal:CaO19.3593 Uniprot:Q59Y56
Length = 401
Score = 796 (285.3 bits), Expect = 2.7e-90, Sum P(2) = 2.7e-90
Identities = 157/232 (67%), Positives = 183/232 (78%)
Query: 69 TMDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLRXXXXXX 128
T +D++ G +PY+ +I++ ++ + + QNLRRL+AQRN+LN KVR L+
Sbjct: 2 TTSIDKSYVHEGGIRPYFEQQIQDTEIRIQQTTQNLRRLEAQRNKLNNKVRQLKDELKLL 61
Query: 129 XXXGSYVGEVVKPMDKKKVLVKVHPEGKFXXXXXXXXXXXXXTPNCRVALRNESYTLHKI 188
GSYVGEVVK M KKVLVK+HPEGKF TP+ RV L+ +S+ L+KI
Sbjct: 62 QEPGSYVGEVVKVMGLKKVLVKIHPEGKFIVNVTKDIDVKKLTPSIRVCLKPDSHDLYKI 121
Query: 189 LPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGV 248
LP KVDPLVSLMMVEKVPDSTY+MVGGLD QIKEIKEVIELPVKHPELF++LGIAQPKGV
Sbjct: 122 LPTKVDPLVSLMMVEKVPDSTYDMVGGLDKQIKEIKEVIELPVKHPELFESLGIAQPKGV 181
Query: 249 LLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
+LYGPPGTGKTLLARAVAHHTEC FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 182 ILYGPPGTGKTLLARAVAHHTECKFIRVSGSELVQKYIGEGSRMVRELFVMA 233
Score = 217 (81.4 bits), Expect = 9.7e-16, P = 9.7e-16
Identities = 48/68 (70%), Positives = 52/68 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHTEC FIRVSGSELVQK+IGEGSRMVRELFVMAR MD
Sbjct: 189 TGKTLLARAVAHHTECKFIRVSGSELVQKYIGEGSRMVRELFVMAR----EHAPSIIFMD 244
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 245 EIDSIGSS 252
Score = 124 (48.7 bits), Expect = 2.7e-90, Sum P(2) = 2.7e-90
Identities = 27/49 (55%), Positives = 29/49 (59%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEATK 378
REHAPSIIFM VQRTMLELLNQLDGFE++K
Sbjct: 234 REHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFESSK 282
>UNIPROTKB|E2RM61 [details] [associations]
symbol:PSMC5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 GeneTree:ENSGT00550000074947
EMBL:AAEX03006359 ProteinModelPortal:E2RM61 PRIDE:E2RM61
Ensembl:ENSCAFT00000020231 OMA:DSNCELQ NextBio:20855489
Uniprot:E2RM61
Length = 251
Score = 770 (276.1 bits), Expect = 3.5e-88, Sum P(2) = 3.5e-88
Identities = 152/183 (83%), Positives = 159/183 (86%)
Query: 118 VRMLRXXXXXXXXXGSYVGEVVKPMDKKKVLVKVHPEGKFXXXXXXXXXXXXXTPNCRVA 177
VR+LR GSYVGEVV+ MDKKKVLVKVHPEGKF TPNCRVA
Sbjct: 7 VRLLREELQLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVA 66
Query: 178 LRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELF 237
LRN+SYTLHKILPNKVDPLVSLMMVEKVPDSTYEM+GGLD QIKEIKEVIELPVKHPELF
Sbjct: 67 LRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELF 126
Query: 238 DALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 297
+ALGIAQPKGVLLYGPPGTGKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELF
Sbjct: 127 EALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELF 186
Query: 298 VMA 300
VMA
Sbjct: 187 VMA 189
Score = 220 (82.5 bits), Expect = 4.0e-18, P = 4.0e-18
Identities = 48/68 (70%), Positives = 53/68 (77%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+CTFIRVSGSELVQKFIGEG+RMVRELFVMAR MD
Sbjct: 145 TGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAR----EHAPSIIFMD 200
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 201 EIDSIGSS 208
Score = 130 (50.8 bits), Expect = 3.5e-88, Sum P(2) = 3.5e-88
Identities = 29/49 (59%), Positives = 29/49 (59%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEATK 378
REHAPSIIFM VQRTMLELLNQLDGFEATK
Sbjct: 190 REHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATK 238
>SGD|S000003016 [details] [associations]
symbol:RPT6 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0034515
"proteasome storage granule" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IMP] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IGI;IMP] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0019904 "protein domain specific binding"
evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IPI] [GO:0006289 "nucleotide-excision
repair" evidence=IGI] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IMP] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IMP]
[GO:0000502 "proteasome complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000003016
GO:GO:0005524 GO:GO:0005634 GO:GO:0019904 GO:GO:0051091
GO:GO:0043161 EMBL:BK006941 GO:GO:0016887 GO:GO:0006338
GO:GO:0043433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0034515
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03066
OMA:TEILRIH GeneTree:ENSGT00550000074947 OrthoDB:EOG44N21J
EMBL:X66400 EMBL:L01626 EMBL:Z72570 EMBL:AY693135 PIR:S64052
RefSeq:NP_011467.1 ProteinModelPortal:Q01939 SMR:Q01939
DIP:DIP-979N IntAct:Q01939 MINT:MINT-568023 STRING:Q01939
PaxDb:Q01939 PeptideAtlas:Q01939 EnsemblFungi:YGL048C GeneID:852834
KEGG:sce:YGL048C NextBio:972403 Genevestigator:Q01939
GermOnline:YGL048C Uniprot:Q01939
Length = 405
Score = 760 (272.6 bits), Expect = 2.7e-86, Sum P(2) = 2.7e-86
Identities = 150/220 (68%), Positives = 173/220 (78%)
Query: 81 GFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVK 140
G KPY+ KI+E +L + K +N+RRL+AQRN LN KVR ++ GSYVGEV+K
Sbjct: 18 GIKPYFEQKIQETELKIRSKTENVRRLEAQRNALNDKVRFIKDELRLLQEPGSYVGEVIK 77
Query: 141 PMDKKKVLVKVHPEGKFXXXXXXXXXXXXXTPNCRVALRNESYTLHKILPNKVDPLVSLM 200
+ KKVLVKV PEGK+ + RV LR++SY LHK+L NK DPLVSLM
Sbjct: 78 IVSDKKVLVKVQPEGKYIVDVAKDINVKDLKASQRVCLRSDSYMLHKVLENKADPLVSLM 137
Query: 201 MVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTL 260
MVEKVPDSTY+MVGGL QIKEIKEVIELPVKHPELF++LGIAQPKGV+LYGPPGTGKTL
Sbjct: 138 MVEKVPDSTYDMVGGLTKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTL 197
Query: 261 LARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
LARAVAHHT+C FIRVSG+ELVQK+IGEGSRMVRELFVMA
Sbjct: 198 LARAVAHHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMA 237
Score = 210 (79.0 bits), Expect = 5.8e-24, Sum P(2) = 5.8e-24
Identities = 41/46 (89%), Positives = 45/46 (97%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVAHHT+C FIRVSG+ELVQK+IGEGSRMVRELFVMAR
Sbjct: 193 TGKTLLARAVAHHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMAR 238
Score = 122 (48.0 bits), Expect = 2.7e-86, Sum P(2) = 2.7e-86
Identities = 27/49 (55%), Positives = 28/49 (57%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEATK 378
REHAPSIIFM VQRTMLELLNQLDGFE +K
Sbjct: 238 REHAPSIIFMDEIDSIGSTRVEGSGGGDSEVQRTMLELLNQLDGFETSK 286
>UNIPROTKB|J3QLH6 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005102 "receptor binding" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IEA] [GO:0017025 "TBP-class protein binding"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0031595 "nuclear proteasome complex"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR003959 Pfam:PF00004
GO:GO:0005524 EMBL:AC015651 ChiTaRS:PSMC5 HGNC:HGNC:9552
Ensembl:ENST00000581842 Uniprot:J3QLH6
Length = 215
Score = 859 (307.4 bits), Expect = 6.9e-86, P = 6.9e-86
Identities = 170/216 (78%), Positives = 184/216 (85%)
Query: 70 MDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLRXXXXXXX 129
M+++E K+ G + YY++KIEELQLIV +K QNLRRLQAQRNELNAKVR+LR
Sbjct: 1 MELEEG-KAGSGLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQ 59
Query: 130 XXGSYVGEVVKPMDKKKVLVKVHPEGKFXXXXXXXXXXXXXTPNCRVALRNESYTLHKIL 189
GSYVGEVV+ MDKKKVLVKVHPEGKF TPNCRVALRN+SYTLHKIL
Sbjct: 60 EQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKIL 119
Query: 190 PNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVL 249
PNKVDPLVSLMMVEKVPDSTYEM+GGLD QIKEIKEVIELPVKHPELF+ALGIAQPKGVL
Sbjct: 120 PNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVL 179
Query: 250 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKF 285
LYGPPGTGKTLLARAVAHHT+CTFIRVSGSELVQKF
Sbjct: 180 LYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKF 215
Score = 145 (56.1 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 28/30 (93%), Positives = 30/30 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKF 41
+GKTLLARAVAHHT+CTFIRVSGSELVQKF
Sbjct: 186 TGKTLLARAVAHHTDCTFIRVSGSELVQKF 215
>ASPGD|ASPL0000064945 [details] [associations]
symbol:AN6988 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001304 GO:GO:0030163 GO:GO:0017111
EMBL:AACD01000117 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM OrthoDB:EOG44N21J
RefSeq:XP_664592.1 ProteinModelPortal:Q5AXJ2 STRING:Q5AXJ2
EnsemblFungi:CADANIAT00000491 GeneID:2869968 KEGG:ani:AN6988.2
Uniprot:Q5AXJ2
Length = 389
Score = 746 (267.7 bits), Expect = 2.4e-85, Sum P(2) = 2.4e-85
Identities = 150/216 (69%), Positives = 172/216 (79%)
Query: 85 YYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPMDK 144
YY KIE ++L + + + LRRL+AQRN+ N++VR+LR GSYVGEVVK M
Sbjct: 6 YYRNKIESMKLEIIQGQAVLRRLEAQRNDYNSRVRLLREELGLLQQPGSYVGEVVKVMST 65
Query: 145 KKVLVKVHPEGKFXXXXXXXXXXXXXTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEK 204
KKVLVKVHPEGK+ T RVAL ++SY L K+LP+ VDPLVSLMMVEK
Sbjct: 66 KKVLVKVHPEGKYVVDIADGVDIGKLTVGKRVALLSDSYKLEKMLPSSVDPLVSLMMVEK 125
Query: 205 VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 264
VPDSTY+M+GGLD QIKEIKEVIEL +KHPELF++LGIAQPKGVLLYGPPGTGKTLLARA
Sbjct: 126 VPDSTYDMIGGLDQQIKEIKEVIELGLKHPELFESLGIAQPKGVLLYGPPGTGKTLLARA 185
Query: 265 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
VAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMA
Sbjct: 186 VAHHTDCRFIRVSGSELVQKYIGEGSRMVRELFVMA 221
Score = 214 (80.4 bits), Expect = 2.1e-15, P = 2.1e-15
Identities = 47/68 (69%), Positives = 52/68 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVAHHT+C FIRVSGSELVQK+IGEGSRMVRELFVMAR MD
Sbjct: 177 TGKTLLARAVAHHTDCRFIRVSGSELVQKYIGEGSRMVRELFVMAR----EHAPSIIFMD 232
Query: 72 VDEAIKSS 79
++I SS
Sbjct: 233 EIDSIGSS 240
Score = 127 (49.8 bits), Expect = 2.4e-85, Sum P(2) = 2.4e-85
Identities = 28/49 (57%), Positives = 28/49 (57%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEATK 378
REHAPSIIFM VQRTMLELLNQLDGFE TK
Sbjct: 222 REHAPSIIFMDEIDSIGSSRIDSAGSGDSEVQRTMLELLNQLDGFEPTK 270
>UNIPROTKB|J3QRW1 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003959 Pfam:PF00004 GO:GO:0005524 EMBL:AC015651
ChiTaRS:PSMC5 HGNC:HGNC:9552 Ensembl:ENST00000579708 Uniprot:J3QRW1
Length = 143
Score = 594 (214.2 bits), Expect = 8.4e-58, P = 8.4e-58
Identities = 115/141 (81%), Positives = 123/141 (87%)
Query: 142 MDKKKVLVKVHPEGKFXXXXXXXXXXXXXTPNCRVALRNESYTLHKILPNKVDPLVSLMM 201
+D + + +VHPEGKF TPNCRVALRN+SYTLHKILPNKVDPLVSLMM
Sbjct: 3 LDGPEQVWRVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMM 62
Query: 202 VEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLL 261
VEKVPDSTYEM+GGLD QIKEIKEVIELPVKHPELF+ALGIAQPKGVLLYGPPGTGKTLL
Sbjct: 63 VEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLL 122
Query: 262 ARAVAHHTECTFIRVSGSELV 282
ARAVAHHT+CTFIRVSGSELV
Sbjct: 123 ARAVAHHTDCTFIRVSGSELV 143
Score = 129 (50.5 bits), Expect = 7.6e-08, P = 7.6e-08
Identities = 25/27 (92%), Positives = 27/27 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELV 38
+GKTLLARAVAHHT+CTFIRVSGSELV
Sbjct: 117 TGKTLLARAVAHHTDCTFIRVSGSELV 143
>UNIPROTKB|F1NSP7 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 IPI:IPI00585304 EMBL:AADN02003628
EMBL:AADN02003629 Ensembl:ENSGALT00000017367 ArrayExpress:F1NSP7
Uniprot:F1NSP7
Length = 439
Score = 417 (151.9 bits), Expect = 4.7e-48, Sum P(2) = 4.7e-48
Identities = 87/212 (41%), Positives = 125/212 (58%)
Query: 89 KIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPMDKKKVL 148
K+E ++ + +E+ +R Q Q L K R VG + + +D +
Sbjct: 63 KLERIKDYLLMEEEFIRN-QEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAI 121
Query: 149 VKVHPEGKFXXXXXXXXXXXXXTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDS 208
V + P C V L ++ + + +L + DPLV++M VEK P
Sbjct: 122 VSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQE 181
Query: 209 TYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH 268
TY +GGLDNQI+EIKE +ELP+ HPE ++ +GI PKGV+LYGPPGTGKTLLA+AVA+
Sbjct: 182 TYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQ 241
Query: 269 TECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 242 TSATFLRVVGSELIQKYLGDGPKLVRELFRVA 273
Score = 149 (57.5 bits), Expect = 4.1e-14, Sum P(2) = 4.1e-14
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 229 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 273
Score = 102 (41.0 bits), Expect = 4.7e-48, Sum P(2) = 4.7e-48
Identities = 21/46 (45%), Positives = 26/46 (56%)
Query: 331 EHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEA 376
EHAPSI+F+ +QRTMLELLNQLDGF++
Sbjct: 275 EHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDS 320
>UNIPROTKB|F1NTZ4 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 EMBL:AADN02003628 EMBL:AADN02003629
IPI:IPI00821206 Ensembl:ENSGALT00000037629 ArrayExpress:F1NTZ4
Uniprot:F1NTZ4
Length = 438
Score = 417 (151.9 bits), Expect = 4.7e-48, Sum P(2) = 4.7e-48
Identities = 87/212 (41%), Positives = 125/212 (58%)
Query: 89 KIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPMDKKKVL 148
K+E ++ + +E+ +R Q Q L K R VG + + +D +
Sbjct: 62 KLERIKDYLLMEEEFIRN-QEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAI 120
Query: 149 VKVHPEGKFXXXXXXXXXXXXXTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDS 208
V + P C V L ++ + + +L + DPLV++M VEK P
Sbjct: 121 VSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQE 180
Query: 209 TYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH 268
TY +GGLDNQI+EIKE +ELP+ HPE ++ +GI PKGV+LYGPPGTGKTLLA+AVA+
Sbjct: 181 TYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQ 240
Query: 269 TECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 241 TSATFLRVVGSELIQKYLGDGPKLVRELFRVA 272
Score = 149 (57.5 bits), Expect = 4.0e-14, Sum P(2) = 4.0e-14
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 228 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 272
Score = 102 (41.0 bits), Expect = 4.7e-48, Sum P(2) = 4.7e-48
Identities = 21/46 (45%), Positives = 26/46 (56%)
Query: 331 EHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEA 376
EHAPSI+F+ +QRTMLELLNQLDGF++
Sbjct: 274 EHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDS 319
>UNIPROTKB|A4FUZ3 [details] [associations]
symbol:PSMC1 "Proteasome (Prosome, macropain) 26S subunit,
ATPase, 1" species:9913 "Bos taurus" [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
OMA:FIRNQER GeneTree:ENSGT00550000074818 OrthoDB:EOG4D7Z5Q
EMBL:DAAA02030032 EMBL:BC123487 IPI:IPI00695877 UniGene:Bt.12340
SMR:A4FUZ3 STRING:A4FUZ3 Ensembl:ENSBTAT00000007135
InParanoid:A4FUZ3 Uniprot:A4FUZ3
Length = 440
Score = 417 (151.9 bits), Expect = 4.7e-48, Sum P(2) = 4.7e-48
Identities = 87/212 (41%), Positives = 125/212 (58%)
Query: 89 KIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPMDKKKVL 148
K+E ++ + +E+ +R Q Q L K R VG + + +D +
Sbjct: 64 KLERIKDYLLMEEEFIRN-QEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAI 122
Query: 149 VKVHPEGKFXXXXXXXXXXXXXTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDS 208
V + P C V L ++ + + +L + DPLV++M VEK P
Sbjct: 123 VSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQE 182
Query: 209 TYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH 268
TY +GGLDNQI+EIKE +ELP+ HPE ++ +GI PKGV+LYGPPGTGKTLLA+AVA+
Sbjct: 183 TYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQ 242
Query: 269 TECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 243 TSATFLRVVGSELIQKYLGDGPKLVRELFRVA 274
Score = 149 (57.5 bits), Expect = 4.1e-14, Sum P(2) = 4.1e-14
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 230 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 274
Score = 102 (41.0 bits), Expect = 4.7e-48, Sum P(2) = 4.7e-48
Identities = 21/46 (45%), Positives = 26/46 (56%)
Query: 331 EHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEA 376
EHAPSI+F+ +QRTMLELLNQLDGF++
Sbjct: 276 EHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDS 321
>UNIPROTKB|F1PQ40 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:AAEX03005924
RefSeq:NP_001238880.1 ProteinModelPortal:F1PQ40
Ensembl:ENSCAFT00000027737 GeneID:100688636 KEGG:cfa:100688636
Uniprot:F1PQ40
Length = 440
Score = 417 (151.9 bits), Expect = 4.7e-48, Sum P(2) = 4.7e-48
Identities = 87/212 (41%), Positives = 125/212 (58%)
Query: 89 KIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPMDKKKVL 148
K+E ++ + +E+ +R Q Q L K R VG + + +D +
Sbjct: 64 KLERIKDYLLMEEEFIRN-QEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAI 122
Query: 149 VKVHPEGKFXXXXXXXXXXXXXTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDS 208
V + P C V L ++ + + +L + DPLV++M VEK P
Sbjct: 123 VSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQE 182
Query: 209 TYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH 268
TY +GGLDNQI+EIKE +ELP+ HPE ++ +GI PKGV+LYGPPGTGKTLLA+AVA+
Sbjct: 183 TYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQ 242
Query: 269 TECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 243 TSATFLRVVGSELIQKYLGDGPKLVRELFRVA 274
Score = 149 (57.5 bits), Expect = 4.1e-14, Sum P(2) = 4.1e-14
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 230 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 274
Score = 102 (41.0 bits), Expect = 4.7e-48, Sum P(2) = 4.7e-48
Identities = 21/46 (45%), Positives = 26/46 (56%)
Query: 331 EHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEA 376
EHAPSI+F+ +QRTMLELLNQLDGF++
Sbjct: 276 EHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDS 321
>UNIPROTKB|P62191 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0000502 "proteasome
complex" evidence=NAS] [GO:0000075 "cell cycle checkpoint"
evidence=TAS] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=TAS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=TAS] [GO:0000209 "protein polyubiquitination"
evidence=TAS] [GO:0000216 "M/G1 transition of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0002474 "antigen processing and presentation of peptide antigen
via MHC class I" evidence=TAS] [GO:0002479 "antigen processing and
presentation of exogenous peptide antigen via MHC class I,
TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005524 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0006915 GO:GO:0010467 GO:GO:0016071
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981 GO:GO:0000082
GO:GO:0016887 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
OMA:FIRNQER CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:L02426 EMBL:CR457044
EMBL:BC000512 EMBL:BC016368 EMBL:BC073818 IPI:IPI00011126
PIR:A44468 RefSeq:NP_002793.2 UniGene:Hs.356654
ProteinModelPortal:P62191 SMR:P62191 IntAct:P62191
MINT:MINT-1141832 STRING:P62191 PhosphoSite:P62191 DMDM:49065817
PaxDb:P62191 PeptideAtlas:P62191 PRIDE:P62191 DNASU:5700
Ensembl:ENST00000261303 GeneID:5700 KEGG:hsa:5700 UCSC:uc001xyf.3
GeneCards:GC14P090722 H-InvDB:HIX0030744 HGNC:HGNC:9547
HPA:HPA000872 MIM:602706 neXtProt:NX_P62191 PharmGKB:PA33892
InParanoid:P62191 PhylomeDB:P62191 GenomeRNAi:5700 NextBio:22146
ArrayExpress:P62191 Bgee:P62191 CleanEx:HS_PSMC1
Genevestigator:P62191 GermOnline:ENSG00000100764 Uniprot:P62191
Length = 440
Score = 417 (151.9 bits), Expect = 4.7e-48, Sum P(2) = 4.7e-48
Identities = 87/212 (41%), Positives = 125/212 (58%)
Query: 89 KIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPMDKKKVL 148
K+E ++ + +E+ +R Q Q L K R VG + + +D +
Sbjct: 64 KLERIKDYLLMEEEFIRN-QEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAI 122
Query: 149 VKVHPEGKFXXXXXXXXXXXXXTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDS 208
V + P C V L ++ + + +L + DPLV++M VEK P
Sbjct: 123 VSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQE 182
Query: 209 TYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH 268
TY +GGLDNQI+EIKE +ELP+ HPE ++ +GI PKGV+LYGPPGTGKTLLA+AVA+
Sbjct: 183 TYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQ 242
Query: 269 TECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 243 TSATFLRVVGSELIQKYLGDGPKLVRELFRVA 274
Score = 149 (57.5 bits), Expect = 4.1e-14, Sum P(2) = 4.1e-14
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 230 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 274
Score = 102 (41.0 bits), Expect = 4.7e-48, Sum P(2) = 4.7e-48
Identities = 21/46 (45%), Positives = 26/46 (56%)
Query: 331 EHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEA 376
EHAPSI+F+ +QRTMLELLNQLDGF++
Sbjct: 276 EHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDS 321
>UNIPROTKB|F2Z5J1 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:CT737375
RefSeq:NP_001231080.1 UniGene:Ssc.1911 ProteinModelPortal:F2Z5J1
SMR:F2Z5J1 PRIDE:F2Z5J1 Ensembl:ENSSSCT00000002703 GeneID:100155274
KEGG:ssc:100155274 Uniprot:F2Z5J1
Length = 440
Score = 417 (151.9 bits), Expect = 4.7e-48, Sum P(2) = 4.7e-48
Identities = 87/212 (41%), Positives = 125/212 (58%)
Query: 89 KIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPMDKKKVL 148
K+E ++ + +E+ +R Q Q L K R VG + + +D +
Sbjct: 64 KLERIKDYLLMEEEFIRN-QEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAI 122
Query: 149 VKVHPEGKFXXXXXXXXXXXXXTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDS 208
V + P C V L ++ + + +L + DPLV++M VEK P
Sbjct: 123 VSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQE 182
Query: 209 TYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH 268
TY +GGLDNQI+EIKE +ELP+ HPE ++ +GI PKGV+LYGPPGTGKTLLA+AVA+
Sbjct: 183 TYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQ 242
Query: 269 TECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 243 TSATFLRVVGSELIQKYLGDGPKLVRELFRVA 274
Score = 149 (57.5 bits), Expect = 4.1e-14, Sum P(2) = 4.1e-14
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 230 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 274
Score = 102 (41.0 bits), Expect = 4.7e-48, Sum P(2) = 4.7e-48
Identities = 21/46 (45%), Positives = 26/46 (56%)
Query: 331 EHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEA 376
EHAPSI+F+ +QRTMLELLNQLDGF++
Sbjct: 276 EHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDS 321
>MGI|MGI:106054 [details] [associations]
symbol:Psmc1 "protease (prosome, macropain) 26S subunit,
ATPase 1" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017025
"TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:106054
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER CTD:5700
OrthoDB:EOG4D7Z5Q EMBL:U39302 EMBL:BC003860 IPI:IPI00133428
RefSeq:NP_032973.1 UniGene:Mm.157105 ProteinModelPortal:P62192
SMR:P62192 IntAct:P62192 STRING:P62192 PhosphoSite:P62192
REPRODUCTION-2DPAGE:IPI00133428 PaxDb:P62192 PRIDE:P62192
Ensembl:ENSMUST00000021595 GeneID:19179 KEGG:mmu:19179
InParanoid:P62192 NextBio:295866 Bgee:P62192 Genevestigator:P62192
GermOnline:ENSMUSG00000021178 Uniprot:P62192
Length = 440
Score = 417 (151.9 bits), Expect = 4.7e-48, Sum P(2) = 4.7e-48
Identities = 87/212 (41%), Positives = 125/212 (58%)
Query: 89 KIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPMDKKKVL 148
K+E ++ + +E+ +R Q Q L K R VG + + +D +
Sbjct: 64 KLERIKDYLLMEEEFIRN-QEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAI 122
Query: 149 VKVHPEGKFXXXXXXXXXXXXXTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDS 208
V + P C V L ++ + + +L + DPLV++M VEK P
Sbjct: 123 VSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQE 182
Query: 209 TYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH 268
TY +GGLDNQI+EIKE +ELP+ HPE ++ +GI PKGV+LYGPPGTGKTLLA+AVA+
Sbjct: 183 TYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQ 242
Query: 269 TECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 243 TSATFLRVVGSELIQKYLGDGPKLVRELFRVA 274
Score = 149 (57.5 bits), Expect = 4.1e-14, Sum P(2) = 4.1e-14
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 230 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 274
Score = 102 (41.0 bits), Expect = 4.7e-48, Sum P(2) = 4.7e-48
Identities = 21/46 (45%), Positives = 26/46 (56%)
Query: 331 EHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEA 376
EHAPSI+F+ +QRTMLELLNQLDGF++
Sbjct: 276 EHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDS 321
>RGD|621097 [details] [associations]
symbol:Psmc1 "proteasome (prosome, macropain) 26S subunit,
ATPase, 1" species:10116 "Rattus norvegicus" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0006200 "ATP catabolic process"
evidence=TAS] [GO:0008150 "biological_process" evidence=ND]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621097 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:D50696
EMBL:BC063157 IPI:IPI00211733 RefSeq:NP_476464.1 UniGene:Rn.10526
ProteinModelPortal:P62193 SMR:P62193 IntAct:P62193 STRING:P62193
PRIDE:P62193 Ensembl:ENSRNOT00000005329 GeneID:117263
KEGG:rno:117263 UCSC:RGD:621097 InParanoid:P62193 NextBio:620148
Genevestigator:P62193 GermOnline:ENSRNOG00000003951 Uniprot:P62193
Length = 440
Score = 417 (151.9 bits), Expect = 4.7e-48, Sum P(2) = 4.7e-48
Identities = 87/212 (41%), Positives = 125/212 (58%)
Query: 89 KIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPMDKKKVL 148
K+E ++ + +E+ +R Q Q L K R VG + + +D +
Sbjct: 64 KLERIKDYLLMEEEFIRN-QEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAI 122
Query: 149 VKVHPEGKFXXXXXXXXXXXXXTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDS 208
V + P C V L ++ + + +L + DPLV++M VEK P
Sbjct: 123 VSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQE 182
Query: 209 TYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH 268
TY +GGLDNQI+EIKE +ELP+ HPE ++ +GI PKGV+LYGPPGTGKTLLA+AVA+
Sbjct: 183 TYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQ 242
Query: 269 TECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 243 TSATFLRVVGSELIQKYLGDGPKLVRELFRVA 274
Score = 149 (57.5 bits), Expect = 4.1e-14, Sum P(2) = 4.1e-14
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 230 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 274
Score = 102 (41.0 bits), Expect = 4.7e-48, Sum P(2) = 4.7e-48
Identities = 21/46 (45%), Positives = 26/46 (56%)
Query: 331 EHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEA 376
EHAPSI+F+ +QRTMLELLNQLDGF++
Sbjct: 276 EHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDS 321
>UNIPROTKB|B4DR63 [details] [associations]
symbol:PSMC1 "cDNA FLJ58247, highly similar to 26S protease
regulatory subunit 4" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0017111 GO:GO:0008233
EMBL:AL161662 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
UniGene:Hs.356654 HGNC:HGNC:9547 EMBL:AL355074 EMBL:AK299121
IPI:IPI01015427 SMR:B4DR63 STRING:B4DR63 Ensembl:ENST00000543772
Uniprot:B4DR63
Length = 367
Score = 412 (150.1 bits), Expect = 1.6e-47, Sum P(2) = 1.6e-47
Identities = 85/200 (42%), Positives = 117/200 (58%)
Query: 101 EQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPMDKKKVLVKVHPEGKFXXX 160
E+ R Q Q L K R VG + + +D +V +
Sbjct: 2 EEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVS 61
Query: 161 XXXXXXXXXXTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQI 220
P C V L ++ + + +L + DPLV++M VEK P TY +GGLDNQI
Sbjct: 62 ILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQI 121
Query: 221 KEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSE 280
+EIKE +ELP+ HPE ++ +GI PKGV+LYGPPGTGKTLLA+AVA+ T TF+RV GSE
Sbjct: 122 QEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSE 181
Query: 281 LVQKFIGEGSRMVRELFVMA 300
L+QK++G+G ++VRELF +A
Sbjct: 182 LIQKYLGDGPKLVRELFRVA 201
Score = 149 (57.5 bits), Expect = 2.0e-14, Sum P(2) = 2.0e-14
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 157 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 201
Score = 102 (41.0 bits), Expect = 1.6e-47, Sum P(2) = 1.6e-47
Identities = 21/46 (45%), Positives = 26/46 (56%)
Query: 331 EHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEA 376
EHAPSI+F+ +QRTMLELLNQLDGF++
Sbjct: 203 EHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDS 248
>UNIPROTKB|Q90732 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 EMBL:U60187
IPI:IPI00585304 PIR:S74197 RefSeq:NP_990289.1 UniGene:Gga.1071
ProteinModelPortal:Q90732 STRING:Q90732 PRIDE:Q90732 GeneID:395804
KEGG:gga:395804 CTD:5700 InParanoid:Q90732 OrthoDB:EOG4D7Z5Q
NextBio:20815872 Uniprot:Q90732
Length = 440
Score = 414 (150.8 bits), Expect = 2.6e-47, Sum P(2) = 2.6e-47
Identities = 86/212 (40%), Positives = 125/212 (58%)
Query: 89 KIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPMDKKKVL 148
K+E ++ + +E+ +R Q Q L K R VG + + +D +
Sbjct: 64 KLERIKDYLLMEEEFIRN-QEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAI 122
Query: 149 VKVHPEGKFXXXXXXXXXXXXXTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDS 208
V + P C V L ++ + + +L + DPLV++M +EK P
Sbjct: 123 VSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKLEKAPQE 182
Query: 209 TYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH 268
TY +GGLDNQI+EIKE +ELP+ HPE ++ +GI PKGV+LYGPPGTGKTLLA+AVA+
Sbjct: 183 TYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQ 242
Query: 269 TECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 243 TSATFLRVVGSELIQKYLGDGPKLVRELFRVA 274
Score = 153 (58.9 bits), Expect = 3.6e-14, Sum P(2) = 3.6e-14
Identities = 30/51 (58%), Positives = 41/51 (80%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A G S
Sbjct: 230 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHGPS 280
Score = 98 (39.6 bits), Expect = 2.6e-47, Sum P(2) = 2.6e-47
Identities = 20/46 (43%), Positives = 25/46 (54%)
Query: 331 EHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEA 376
EH PSI+F+ +QRTMLELLNQLDGF++
Sbjct: 276 EHGPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDS 321
>GENEDB_PFALCIPARUM|PF10_0081 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory
subunit 4, putative" species:5833 "Plasmodium falciparum"
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 407 (148.3 bits), Expect = 4.2e-47, Sum P(2) = 4.2e-47
Identities = 75/129 (58%), Positives = 104/129 (80%)
Query: 172 PNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPV 231
P C V L N++ ++ IL ++VDPLVS+M VEK P +Y +GGL++QI+EIKE +ELP+
Sbjct: 154 PGCSVLLNNKTNSVVGILLDEVDPLVSVMKVEKAPLESYADIGGLESQIQEIKEAVELPL 213
Query: 232 KHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSR 291
HPEL++ +GI PKGV+LYGPPGTGKTLLA+AVA+ T TF+RV GSEL+QK++G+G +
Sbjct: 214 THPELYEDIGIKPPKGVILYGPPGTGKTLLAKAVANETSATFLRVVGSELIQKYLGDGPK 273
Query: 292 MVRELFVMA 300
+VRE+F +A
Sbjct: 274 LVREMFKVA 282
Score = 148 (57.2 bits), Expect = 4.5e-14, Sum P(2) = 4.5e-14
Identities = 27/45 (60%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRE+F +A
Sbjct: 238 TGKTLLAKAVANETSATFLRVVGSELIQKYLGDGPKLVREMFKVA 282
Score = 103 (41.3 bits), Expect = 4.2e-47, Sum P(2) = 4.2e-47
Identities = 21/46 (45%), Positives = 26/46 (56%)
Query: 331 EHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEA 376
EHAPSI+F+ +QRTMLELLNQLDGF++
Sbjct: 284 EHAPSIVFIDEIDAVGTKRYEATSGGEREIQRTMLELLNQLDGFDS 329
>UNIPROTKB|Q8IJW0 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory subunit 4,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 407 (148.3 bits), Expect = 4.2e-47, Sum P(2) = 4.2e-47
Identities = 75/129 (58%), Positives = 104/129 (80%)
Query: 172 PNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPV 231
P C V L N++ ++ IL ++VDPLVS+M VEK P +Y +GGL++QI+EIKE +ELP+
Sbjct: 154 PGCSVLLNNKTNSVVGILLDEVDPLVSVMKVEKAPLESYADIGGLESQIQEIKEAVELPL 213
Query: 232 KHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSR 291
HPEL++ +GI PKGV+LYGPPGTGKTLLA+AVA+ T TF+RV GSEL+QK++G+G +
Sbjct: 214 THPELYEDIGIKPPKGVILYGPPGTGKTLLAKAVANETSATFLRVVGSELIQKYLGDGPK 273
Query: 292 MVRELFVMA 300
+VRE+F +A
Sbjct: 274 LVREMFKVA 282
Score = 148 (57.2 bits), Expect = 4.5e-14, Sum P(2) = 4.5e-14
Identities = 27/45 (60%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRE+F +A
Sbjct: 238 TGKTLLAKAVANETSATFLRVVGSELIQKYLGDGPKLVREMFKVA 282
Score = 103 (41.3 bits), Expect = 4.2e-47, Sum P(2) = 4.2e-47
Identities = 21/46 (45%), Positives = 26/46 (56%)
Query: 331 EHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEA 376
EHAPSI+F+ +QRTMLELLNQLDGF++
Sbjct: 284 EHAPSIVFIDEIDAVGTKRYEATSGGEREIQRTMLELLNQLDGFDS 329
>SGD|S000002165 [details] [associations]
symbol:RPT2 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0016887 "ATPase activity"
evidence=IDA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IMP] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IMP] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=IDA] [GO:0045732 "positive regulation of
protein catabolic process" evidence=IDA] [GO:0043171 "peptide
catabolic process" evidence=IMP] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000002165 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006938 GO:GO:0016887 GO:GO:0043171 GO:GO:0006511
GO:GO:0045732 EMBL:Z48432 GO:GO:0070682 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T
PDBsum:4B4T KO:K03062 OMA:FIRNQER GeneTree:ENSGT00550000074818
OrthoDB:EOG4FN7S6 EMBL:X81070 EMBL:L17040 EMBL:Z74055 PIR:S46613
RefSeq:NP_010277.1 ProteinModelPortal:P40327 SMR:P40327
DIP:DIP-6282N IntAct:P40327 MINT:MINT-632695 STRING:P40327
PaxDb:P40327 PeptideAtlas:P40327 PRIDE:P40327 EnsemblFungi:YDL007W
GeneID:851557 KEGG:sce:YDL007W NextBio:968983 Genevestigator:P40327
GermOnline:YDL007W Uniprot:P40327
Length = 437
Score = 378 (138.1 bits), Expect = 6.8e-47, Sum P(3) = 6.8e-47
Identities = 66/129 (51%), Positives = 100/129 (77%)
Query: 172 PNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPV 231
P C V L +++ ++ +L + DP+VS+M ++K P +Y +GGL++QI+EIKE +ELP+
Sbjct: 143 PGCSVLLHHKTMSIVGVLQDDADPMVSVMKMDKSPTESYSDIGGLESQIQEIKESVELPL 202
Query: 232 KHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSR 291
HPEL++ +GI PKGV+LYG PGTGKTLLA+AVA+ T TF+R+ GSEL+QK++G+G R
Sbjct: 203 THPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPR 262
Query: 292 MVRELFVMA 300
+ R++F +A
Sbjct: 263 LCRQIFKVA 271
Score = 143 (55.4 bits), Expect = 5.4e-07, P = 5.4e-07
Identities = 28/62 (45%), Positives = 45/62 (72%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLA+AVA+ T TF+R+ GSEL+QK++G+G R+ R++F +A G + + F +
Sbjct: 227 TGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPRLCRQIFKVA---GENAPSIVFIDE 283
Query: 72 VD 73
+D
Sbjct: 284 ID 285
Score = 94 (38.1 bits), Expect = 6.8e-47, Sum P(3) = 6.8e-47
Identities = 20/45 (44%), Positives = 25/45 (55%)
Query: 331 EHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFE 375
E+APSI+F+ +QRTMLELLNQLDGF+
Sbjct: 273 ENAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFD 317
Score = 47 (21.6 bits), Expect = 6.8e-47, Sum P(3) = 6.8e-47
Identities = 23/87 (26%), Positives = 37/87 (42%)
Query: 2 LKPLHPTWIVSGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGS 61
L ++P+ K L + H VS SE+++ F + ++L + R
Sbjct: 46 LPNIYPSTRCKLKLLRMERIKDHLLLEEEFVSNSEILKPFEKKQEEEKKQLEEI-RGNPL 104
Query: 62 SRGTEFFTMDVDEAIKSSEGFKPYYVT 88
S GT +D D AI +S YYV+
Sbjct: 105 SIGTLEEIIDDDHAIVTSPTMPDYYVS 131
>WB|WBGene00004502 [details] [associations]
symbol:rpt-2 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0000003 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER EMBL:FO080494 PIR:T31800
RefSeq:NP_504558.1 ProteinModelPortal:O16368 SMR:O16368
IntAct:O16368 MINT:MINT-210699 STRING:O16368 PaxDb:O16368
PRIDE:O16368 EnsemblMetazoa:F29G9.5.1 EnsemblMetazoa:F29G9.5.2
GeneID:178988 KEGG:cel:CELE_F29G9.5 UCSC:F29G9.5 CTD:178988
WormBase:F29G9.5 GeneTree:ENSGT00550000074818 InParanoid:O16368
NextBio:903424 Uniprot:O16368
Length = 443
Score = 412 (150.1 bits), Expect = 8.6e-47, Sum P(2) = 8.6e-47
Identities = 90/215 (41%), Positives = 130/215 (60%)
Query: 89 KIEELQLIVAEKEQNLRRLQAQ---RNELNAKVRMLRXXXXXXXXXGSYVGEVVKPMDKK 145
+I++ L+ E QN RL+ Q + E AKV LR VG + + +D +
Sbjct: 70 RIKDYLLMEQEFIQNQERLKPQEERQEEERAKVDELRGTPMA-------VGSLEEIIDDQ 122
Query: 146 KVLVKVHPEGKFXXXXXXXXXXXXXTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
+V + + P C V L ++++ + +L + DP+VS+M +EK
Sbjct: 123 HAIVSTNVGSEHYVNIMSFVDKEQLEPGCSVLLNHKNHAVIGVLSDDTDPMVSVMKLEKA 182
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
P TY VGGLD QI+EIKE +ELP+ HPE ++ +GI PKGV+LYG PGTGKTLLA+AV
Sbjct: 183 PQETYADVGGLDQQIQEIKEAVELPLTHPEYYEEMGIRPPKGVILYGCPGTGKTLLAKAV 242
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
A+ T TF+R+ GSEL+QK++G+G +MVRELF +A
Sbjct: 243 ANQTSATFLRIVGSELIQKYLGDGPKMVRELFRVA 277
Score = 151 (58.2 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+R+ GSEL+QK++G+G +MVRELF +A
Sbjct: 233 TGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPKMVRELFRVA 277
Score = 95 (38.5 bits), Expect = 8.6e-47, Sum P(2) = 8.6e-47
Identities = 20/46 (43%), Positives = 26/46 (56%)
Query: 331 EHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEA 376
E+APSI+F+ +QRTMLELLNQLDGF++
Sbjct: 279 ENAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDS 324
>ZFIN|ZDB-GENE-040625-69 [details] [associations]
symbol:psmc1b "proteasome (prosome, macropain) 26S
subunit, ATPase, 1b" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-040625-69 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
KO:K03062 GeneTree:ENSGT00550000074818 EMBL:AL935145 EMBL:BC071538
IPI:IPI00495318 RefSeq:NP_001002091.1 UniGene:Dr.1187 STRING:Q6IQ72
Ensembl:ENSDART00000063950 GeneID:415181 KEGG:dre:415181 CTD:415181
InParanoid:Q6IQ72 NextBio:20818851 Uniprot:Q6IQ72
Length = 440
Score = 404 (147.3 bits), Expect = 1.1e-46, Sum P(2) = 1.1e-46
Identities = 84/200 (42%), Positives = 116/200 (58%)
Query: 101 EQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPMDKKKVLVKVHPEGKFXXX 160
E+ R Q Q L K R VG + + +D +V +
Sbjct: 75 EEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVS 134
Query: 161 XXXXXXXXXXTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQI 220
P C V L ++ + + +L + DPLV++M VEK P TY +GGLDNQI
Sbjct: 135 ILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQI 194
Query: 221 KEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSE 280
+EIKE +ELP+ HPE ++ +GI PKGV+LYG PGTGKTLLA+AVA+ T TF+RV GSE
Sbjct: 195 QEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSE 254
Query: 281 LVQKFIGEGSRMVRELFVMA 300
L+QK++G+G ++VRELF +A
Sbjct: 255 LIQKYLGDGPKLVRELFRVA 274
Score = 149 (57.5 bits), Expect = 4.1e-14, Sum P(2) = 4.1e-14
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 230 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 274
Score = 102 (41.0 bits), Expect = 1.1e-46, Sum P(2) = 1.1e-46
Identities = 21/46 (45%), Positives = 26/46 (56%)
Query: 331 EHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEA 376
EHAPSI+F+ +QRTMLELLNQLDGF++
Sbjct: 276 EHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDS 321
>UNIPROTKB|Q58576 [details] [associations]
symbol:pan "Proteasome-activating nucleotidase"
species:243232 "Methanocaldococcus jannaschii DSM 2661" [GO:0003924
"GTPase activity" evidence=IDA] [GO:0006184 "GTP catabolic process"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0010498 "proteasomal protein catabolic process" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0022623
"proteasome-activating nucleotidase complex" evidence=IDA]
[GO:0043273 "CTPase activity" evidence=IDA] [GO:0043335 "protein
unfolding" evidence=IDA] HAMAP:MF_00553 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0003924 GO:GO:0016887 GO:GO:0010498
GO:GO:0022623 GO:GO:0043335 GO:GO:0043273 EMBL:L77117
GenomeReviews:L77117_GR PIR:G64446 RefSeq:NP_248170.1 PDB:3H43
PDB:3H4M PDB:3IPM PDBsum:3H43 PDBsum:3H4M PDBsum:3IPM
ProteinModelPortal:Q58576 SMR:Q58576 PRIDE:Q58576 GeneID:1452074
KEGG:mja:MJ_1176 eggNOG:COG1222 KO:K03420 OMA:RVNERKA
ProtClustDB:PRK03992 EvolutionaryTrace:Q58576 InterPro:IPR023501
TIGRFAMs:TIGR01242 Uniprot:Q58576
Length = 430
Score = 421 (153.3 bits), Expect = 2.9e-46, Sum P(2) = 2.9e-46
Identities = 105/266 (39%), Positives = 149/266 (56%)
Query: 48 MVRELFVMARCKGSSRG-TEFFTMDVDEAIKSSEGFKPYYVTKIEELQ--LIVAEKEQNL 104
MV E F+ K + TE F + + I + K + EELQ +AE E +
Sbjct: 1 MVFEEFISTELKKEKKAFTEEFKEEKE--INDNSNLKNDLLK--EELQEKARIAELESRI 56
Query: 105 RRLQAQRNEL---NAKV----RMLRXXXXXXXXXGSYVGEVVKPMDKKKVLVKVHPEGKF 157
+L+ ++ EL N ++ +LR VG VV + ++KV+VK F
Sbjct: 57 LKLELEKKELERENLQLMKENEILRRELDRMRVPPLIVGTVVDKVGERKVVVKSSTGPSF 116
Query: 158 XXXXXXXXXXXXXTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLD 217
P RV L ++ T+ +LP D M V++ P+ YE +GGL+
Sbjct: 117 LVNVSHFVNPDDLAPGKRVCLNQQTLTVVDVLPENKDYRAKAMEVDERPNVRYEDIGGLE 176
Query: 218 NQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVS 277
Q++EI+EV+ELP+KHPELF+ +GI PKG+LLYGPPGTGKTLLA+AVA T TFIRV
Sbjct: 177 KQMQEIREVVELPLKHPELFEKVGIEPPKGILLYGPPGTGKTLLAKAVATETNATFIRVV 236
Query: 278 GSELVQKFIGEGSRMVRELFVMASLK 303
GSELV+KFIGEG+ +V+++F +A K
Sbjct: 237 GSELVKKFIGEGASLVKDIFKLAKEK 262
Score = 152 (58.6 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 31/51 (60%), Positives = 41/51 (80%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
+GKTLLA+AVA T TFIRV GSELV+KFIGEG+ +V+++F +A+ K S
Sbjct: 215 TGKTLLAKAVATETNATFIRVVGSELVKKFIGEGASLVKDIFKLAKEKAPS 265
Score = 81 (33.6 bits), Expect = 2.9e-46, Sum P(2) = 2.9e-46
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEA 376
+E APSIIF+ VQRT+++LL ++DGF+A
Sbjct: 260 KEKAPSIIFIDEIDAIAAKRTDALTGGDREVQRTLMQLLAEMDGFDA 306
Score = 37 (18.1 bits), Expect = 8.6e-08, Sum P(2) = 8.6e-08
Identities = 9/13 (69%), Positives = 10/13 (76%)
Query: 138 VVKPMDKKKVLVK 150
V K M+KKKV VK
Sbjct: 408 VEKIMEKKKVKVK 420
>ZFIN|ZDB-GENE-030131-8730 [details] [associations]
symbol:psmc1a "proteasome (prosome, macropain) 26S
subunit, ATPase, 1a" species:7955 "Danio rerio" [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-8730 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 HSSP:P43773
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 KO:K03062 EMBL:BC049471
IPI:IPI00500900 RefSeq:NP_956327.1 UniGene:Dr.76288
ProteinModelPortal:Q7ZWD1 STRING:Q7ZWD1 GeneID:336786
KEGG:dre:336786 CTD:336786 InParanoid:Q7ZWD1 NextBio:20811903
ArrayExpress:Q7ZWD1 Uniprot:Q7ZWD1
Length = 440
Score = 400 (145.9 bits), Expect = 2.9e-46, Sum P(2) = 2.9e-46
Identities = 89/221 (40%), Positives = 132/221 (59%)
Query: 80 EGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVV 139
E K Y + + EE + ++EQ ++ L+ ++ E +KV LR VG +
Sbjct: 66 ERIKDYLLME-EEF---IRDQEQ-MKPLEEKQEEERSKVDDLRGTPMS-------VGTLE 113
Query: 140 KPMDKKKVLVKVHPEGKFXXXXXXXXXXXXXTPNCRVALRNESYTLHKILPNKVDPLVSL 199
+ +D +V + P C V L ++ + + +L + DPLV++
Sbjct: 114 EIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTV 173
Query: 200 MMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKT 259
M VEK P TY +GGLD+QI+EIKE +ELP+ HPE ++ +GI PKGV+LYG PGTGKT
Sbjct: 174 MKVEKAPQETYADIGGLDSQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKT 233
Query: 260 LLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
LLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 234 LLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 274
Score = 149 (57.5 bits), Expect = 4.1e-14, Sum P(2) = 4.1e-14
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 230 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 274
Score = 102 (41.0 bits), Expect = 2.9e-46, Sum P(2) = 2.9e-46
Identities = 21/46 (45%), Positives = 26/46 (56%)
Query: 331 EHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEA 376
EHAPSI+F+ +QRTMLELLNQLDGF++
Sbjct: 276 EHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDS 321
>FB|FBgn0015282 [details] [associations]
symbol:Rpt2 "Regulatory particle triple-A ATPase 2"
species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0000502 "proteasome complex"
evidence=NAS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=IDA]
[GO:0005838 "proteasome regulatory particle" evidence=ISS;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0009987 "cellular process" evidence=IMP] [GO:0007052 "mitotic
spindle organization" evidence=IMP] [GO:0000022 "mitotic spindle
elongation" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:AE014297 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0008283 GO:GO:0006508 GO:GO:0006974
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000022
eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540 KO:K03062
OMA:FIRNQER GeneTree:ENSGT00550000074818 EMBL:U39303 EMBL:AY058759
RefSeq:NP_524469.2 UniGene:Dm.2368 ProteinModelPortal:P48601
SMR:P48601 DIP:DIP-17276N IntAct:P48601 MINT:MINT-817128
STRING:P48601 PaxDb:P48601 PRIDE:P48601 EnsemblMetazoa:FBtr0084520
GeneID:42828 KEGG:dme:Dmel_CG5289 CTD:42828 FlyBase:FBgn0015282
InParanoid:P48601 OrthoDB:EOG4R4XJ3 PhylomeDB:P48601
BRENDA:3.4.25.1 ChiTaRS:Pros26.4 GenomeRNAi:42828 NextBio:830777
Bgee:P48601 GermOnline:CG5289 Uniprot:P48601
Length = 439
Score = 399 (145.5 bits), Expect = 3.7e-46, Sum P(2) = 3.7e-46
Identities = 86/215 (40%), Positives = 128/215 (59%)
Query: 89 KIEELQ-LIVAEKE--QNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPMDKK 145
K+E ++ ++ E E +N RL+ Q +E N + R VG + + +D
Sbjct: 63 KLERIKDYLMMEDEFIRNQERLKPQ-DEKNEEER---SKVDDLRGTPMSVGNLEEIIDDN 118
Query: 146 KVLVKVHPEGKFXXXXXXXXXXXXXTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
+V + P C V L ++ + + +L + DP+V++M +EK
Sbjct: 119 HAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTDPMVTVMKLEKA 178
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
P TY +GGLD QI+EIKE +ELP+ HPE ++ +GI PKGV+LYGPPGTGKTLLA+AV
Sbjct: 179 PQETYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAV 238
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
A+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 239 ANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 273
Score = 149 (57.5 bits), Expect = 4.1e-14, Sum P(2) = 4.1e-14
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 229 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 273
Score = 102 (41.0 bits), Expect = 3.7e-46, Sum P(2) = 3.7e-46
Identities = 21/46 (45%), Positives = 26/46 (56%)
Query: 331 EHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEA 376
EHAPSI+F+ +QRTMLELLNQLDGF++
Sbjct: 275 EHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDS 320
>TAIR|locus:2159996 [details] [associations]
symbol:RPT4A "regulatory particle triple-A ATPase 4A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005618 "cell wall" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618 GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AB008264 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123393 EMBL:AF372945 EMBL:AY078040 EMBL:AK220732
IPI:IPI00547512 RefSeq:NP_199115.1 UniGene:At.6532
ProteinModelPortal:Q9SEI3 SMR:Q9SEI3 IntAct:Q9SEI3 STRING:Q9SEI3
PaxDb:Q9SEI3 PRIDE:Q9SEI3 EnsemblPlants:AT5G43010.1 GeneID:834316
KEGG:ath:AT5G43010 GeneFarm:2749 TAIR:At5g43010 InParanoid:Q9SEI3
OMA:NAPFDPE PhylomeDB:Q9SEI3 ProtClustDB:CLSN2679874 Uniprot:Q9SEI3
Length = 399
Score = 396 (144.5 bits), Expect = 2.6e-45, Sum P(2) = 2.6e-45
Identities = 86/230 (37%), Positives = 136/230 (59%)
Query: 71 DVDEAIKSSEGFKPYYVTKI---EELQLIVAEKEQNLRRLQAQRNELNAKVRMLRXXXXX 127
DVDE+++ Y K+ +EL+ V +NLR + + N+ ++ L+
Sbjct: 3 DVDESVRRRTAAVSEYRKKLLQHKELESRVRTARENLRGAKKEFNKTEDDLKSLQSV--- 59
Query: 128 XXXXGSYVGEVVKPMDKKKVLVKVHPEGKFXXXXXXXXXXXXXTPNCRVALRNESYTLHK 187
G +GEV++P+D ++++VK ++ T RV L + T+ +
Sbjct: 60 ----GQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMR 115
Query: 188 ILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKG 247
LP +VDP+V M+ E + +Y VGGL +QI+E++E IELP+ +PELF +GI PKG
Sbjct: 116 ALPREVDPVVYNMLHEDPGNISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKG 175
Query: 248 VLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 297
VLLYGPPGTGKTLLARA+A + + F++V S ++ K+IGE +R++RE+F
Sbjct: 176 VLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF 225
Score = 123 (48.4 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 22/46 (47%), Positives = 35/46 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARA+A + + F++V S ++ K+IGE +R++RE+F AR
Sbjct: 184 TGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAR 229
Score = 97 (39.2 bits), Expect = 2.6e-45, Sum P(2) = 2.6e-45
Identities = 20/46 (43%), Positives = 24/46 (52%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFE 375
REH P IIFM +QRT++ELLNQLDGF+
Sbjct: 229 REHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFD 274
>UNIPROTKB|F1NCS8 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074826 OMA:EHKEVES EMBL:AADN02004069
IPI:IPI00570965 Ensembl:ENSGALT00000020277 ArrayExpress:F1NCS8
Uniprot:F1NCS8
Length = 403
Score = 400 (145.9 bits), Expect = 3.3e-45, Sum P(2) = 3.3e-45
Identities = 84/199 (42%), Positives = 116/199 (58%)
Query: 99 EKEQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPMDKKKVLVKVHPEGKFX 158
E + L+ L+ Q EL + G VGEV+K + ++K +VK ++
Sbjct: 35 EIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYV 94
Query: 159 XXXXXXXXXXXXTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDN 218
P RVAL + T+ + LP +VDPLV M E D +Y +GGL
Sbjct: 95 VGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDVSYSEIGGLSE 154
Query: 219 QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSG 278
QI+E++EVIELP+ +PELF +GI PKG LLYGPPGTGKTLLARAVA +C F++V
Sbjct: 155 QIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVS 214
Query: 279 SELVQKFIGEGSRMVRELF 297
S +V K+IGE +R++RE+F
Sbjct: 215 SSIVDKYIGESARLIREMF 233
Score = 134 (52.2 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 25/46 (54%), Positives = 35/46 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA +C F++V S +V K+IGE +R++RE+F AR
Sbjct: 192 TGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYAR 237
Score = 92 (37.4 bits), Expect = 3.3e-45, Sum P(2) = 3.3e-45
Identities = 18/46 (39%), Positives = 24/46 (52%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFE 375
R+H P IIFM +QRT++ELLNQ+DGF+
Sbjct: 237 RDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFD 282
>UNIPROTKB|Q5ZKX2 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826 EMBL:AADN02004069
EMBL:AJ719962 IPI:IPI00820938 RefSeq:NP_001006494.1
UniGene:Gga.16005 STRING:Q5ZKX2 Ensembl:ENSGALT00000037197
GeneID:423586 KEGG:gga:423586 InParanoid:Q5ZKX2 NextBio:20826039
Uniprot:Q5ZKX2
Length = 389
Score = 400 (145.9 bits), Expect = 3.3e-45, Sum P(2) = 3.3e-45
Identities = 84/199 (42%), Positives = 116/199 (58%)
Query: 99 EKEQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPMDKKKVLVKVHPEGKFX 158
E + L+ L+ Q EL + G VGEV+K + ++K +VK ++
Sbjct: 21 EIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYV 80
Query: 159 XXXXXXXXXXXXTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDN 218
P RVAL + T+ + LP +VDPLV M E D +Y +GGL
Sbjct: 81 VGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDVSYSEIGGLSE 140
Query: 219 QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSG 278
QI+E++EVIELP+ +PELF +GI PKG LLYGPPGTGKTLLARAVA +C F++V
Sbjct: 141 QIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVS 200
Query: 279 SELVQKFIGEGSRMVRELF 297
S +V K+IGE +R++RE+F
Sbjct: 201 SSIVDKYIGESARLIREMF 219
Score = 134 (52.2 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 25/46 (54%), Positives = 35/46 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA +C F++V S +V K+IGE +R++RE+F AR
Sbjct: 178 TGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYAR 223
Score = 92 (37.4 bits), Expect = 3.3e-45, Sum P(2) = 3.3e-45
Identities = 18/46 (39%), Positives = 24/46 (52%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFE 375
R+H P IIFM +QRT++ELLNQ+DGF+
Sbjct: 223 RDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFD 268
>UNIPROTKB|F1MLV1 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242 IPI:IPI00707369
UniGene:Bt.22570 GeneTree:ENSGT00550000074826 OMA:EHKEVES
EMBL:DAAA02027846 ProteinModelPortal:F1MLV1 SMR:F1MLV1 PRIDE:F1MLV1
Ensembl:ENSBTAT00000020886 Uniprot:F1MLV1
Length = 389
Score = 395 (144.1 bits), Expect = 1.1e-44, Sum P(2) = 1.1e-44
Identities = 83/199 (41%), Positives = 116/199 (58%)
Query: 99 EKEQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPMDKKKVLVKVHPEGKFX 158
E + L+ L+ Q EL + G VGEV+K + ++K +VK ++
Sbjct: 21 EIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYV 80
Query: 159 XXXXXXXXXXXXTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDN 218
P RVAL + T+ + LP +VDPLV M E + +Y +GGL
Sbjct: 81 VGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSE 140
Query: 219 QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSG 278
QI+E++EVIELP+ +PELF +GI PKG LLYGPPGTGKTLLARAVA +C F++V
Sbjct: 141 QIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVS 200
Query: 279 SELVQKFIGEGSRMVRELF 297
S +V K+IGE +R++RE+F
Sbjct: 201 SSIVDKYIGESARLIREMF 219
Score = 134 (52.2 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 25/46 (54%), Positives = 35/46 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA +C F++V S +V K+IGE +R++RE+F AR
Sbjct: 178 TGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYAR 223
Score = 92 (37.4 bits), Expect = 1.1e-44, Sum P(2) = 1.1e-44
Identities = 18/46 (39%), Positives = 24/46 (52%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFE 375
R+H P IIFM +QRT++ELLNQ+DGF+
Sbjct: 223 RDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFD 268
>UNIPROTKB|Q2KIW6 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 HSSP:Q9WZ49 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 EMBL:BC112482
IPI:IPI00707369 RefSeq:NP_001039705.1 UniGene:Bt.22570
ProteinModelPortal:Q2KIW6 STRING:Q2KIW6 PRIDE:Q2KIW6 GeneID:518637
KEGG:bta:518637 CTD:5706 HOGENOM:HOG000225143 InParanoid:Q2KIW6
OrthoDB:EOG408N84 NextBio:20872697 Uniprot:Q2KIW6
Length = 389
Score = 395 (144.1 bits), Expect = 1.1e-44, Sum P(2) = 1.1e-44
Identities = 83/199 (41%), Positives = 116/199 (58%)
Query: 99 EKEQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPMDKKKVLVKVHPEGKFX 158
E + L+ L+ Q EL + G VGEV+K + ++K +VK ++
Sbjct: 21 EIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYV 80
Query: 159 XXXXXXXXXXXXTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDN 218
P RVAL + T+ + LP +VDPLV M E + +Y +GGL
Sbjct: 81 VGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSE 140
Query: 219 QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSG 278
QI+E++EVIELP+ +PELF +GI PKG LLYGPPGTGKTLLARAVA +C F++V
Sbjct: 141 QIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVS 200
Query: 279 SELVQKFIGEGSRMVRELF 297
S +V K+IGE +R++RE+F
Sbjct: 201 SSIVDKYIGESARLIREMF 219
Score = 134 (52.2 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 25/46 (54%), Positives = 35/46 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA +C F++V S +V K+IGE +R++RE+F AR
Sbjct: 178 TGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYAR 223
Score = 92 (37.4 bits), Expect = 1.1e-44, Sum P(2) = 1.1e-44
Identities = 18/46 (39%), Positives = 24/46 (52%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFE 375
R+H P IIFM +QRT++ELLNQ+DGF+
Sbjct: 223 RDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFD 268
>UNIPROTKB|J9P1N0 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:AAEX03016845 Ensembl:ENSCAFT00000019502
Uniprot:J9P1N0
Length = 395
Score = 395 (144.1 bits), Expect = 1.1e-44, Sum P(2) = 1.1e-44
Identities = 83/199 (41%), Positives = 116/199 (58%)
Query: 99 EKEQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPMDKKKVLVKVHPEGKFX 158
E + L+ L+ Q EL + G VGEV+K + ++K +VK ++
Sbjct: 27 EIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYV 86
Query: 159 XXXXXXXXXXXXTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDN 218
P RVAL + T+ + LP +VDPLV M E + +Y +GGL
Sbjct: 87 VGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSE 146
Query: 219 QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSG 278
QI+E++EVIELP+ +PELF +GI PKG LLYGPPGTGKTLLARAVA +C F++V
Sbjct: 147 QIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVS 206
Query: 279 SELVQKFIGEGSRMVRELF 297
S +V K+IGE +R++RE+F
Sbjct: 207 SSIVDKYIGESARLIREMF 225
Score = 134 (52.2 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 25/46 (54%), Positives = 35/46 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA +C F++V S +V K+IGE +R++RE+F AR
Sbjct: 184 TGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYAR 229
Score = 92 (37.4 bits), Expect = 1.1e-44, Sum P(2) = 1.1e-44
Identities = 18/46 (39%), Positives = 24/46 (52%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFE 375
R+H P IIFM +QRT++ELLNQ+DGF+
Sbjct: 229 RDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFD 274
>UNIPROTKB|P62333 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0016887 "ATPase
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0030674 "protein binding, bridging" evidence=NAS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IC]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=TAS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
GO:GO:0042981 GO:GO:0000082 GO:GO:0030674 GO:GO:0016887
EMBL:CH471078 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 EMBL:D78275 EMBL:AF006305 EMBL:BT006843
EMBL:CR456709 EMBL:AK313670 EMBL:BC005390 IPI:IPI00926977
PIR:S71316 RefSeq:NP_002797.3 UniGene:Hs.156171
ProteinModelPortal:P62333 SMR:P62333 DIP:DIP-38150N IntAct:P62333
MINT:MINT-5001174 STRING:P62333 PhosphoSite:P62333 DMDM:51702772
REPRODUCTION-2DPAGE:IPI00021926 PaxDb:P62333 PeptideAtlas:P62333
PRIDE:P62333 DNASU:5706 Ensembl:ENST00000445930 GeneID:5706
KEGG:hsa:5706 UCSC:uc010tqx.2 GeneCards:GC14P053173
H-InvDB:HIX0011661 HGNC:HGNC:9553 HPA:HPA042823 MIM:602708
neXtProt:NX_P62333 PharmGKB:PA33898 InParanoid:P62333
PhylomeDB:P62333 GenomeRNAi:5706 NextBio:22170 Bgee:P62333
CleanEx:HS_PSMC6 Genevestigator:P62333 GermOnline:ENSG00000100519
Uniprot:P62333
Length = 389
Score = 395 (144.1 bits), Expect = 1.1e-44, Sum P(2) = 1.1e-44
Identities = 83/199 (41%), Positives = 116/199 (58%)
Query: 99 EKEQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPMDKKKVLVKVHPEGKFX 158
E + L+ L+ Q EL + G VGEV+K + ++K +VK ++
Sbjct: 21 EIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYV 80
Query: 159 XXXXXXXXXXXXTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDN 218
P RVAL + T+ + LP +VDPLV M E + +Y +GGL
Sbjct: 81 VGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSE 140
Query: 219 QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSG 278
QI+E++EVIELP+ +PELF +GI PKG LLYGPPGTGKTLLARAVA +C F++V
Sbjct: 141 QIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVS 200
Query: 279 SELVQKFIGEGSRMVRELF 297
S +V K+IGE +R++RE+F
Sbjct: 201 SSIVDKYIGESARLIREMF 219
Score = 134 (52.2 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 25/46 (54%), Positives = 35/46 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA +C F++V S +V K+IGE +R++RE+F AR
Sbjct: 178 TGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYAR 223
Score = 92 (37.4 bits), Expect = 1.1e-44, Sum P(2) = 1.1e-44
Identities = 18/46 (39%), Positives = 24/46 (52%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFE 375
R+H P IIFM +QRT++ELLNQ+DGF+
Sbjct: 223 RDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFD 268
>UNIPROTKB|F1SFE6 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064
TIGRFAMs:TIGR01242 CTD:5706 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:CU407115 RefSeq:XP_001928782.2 UniGene:Ssc.51323
Ensembl:ENSSSCT00000005554 GeneID:100154148 KEGG:ssc:100154148
ArrayExpress:F1SFE6 Uniprot:F1SFE6
Length = 403
Score = 395 (144.1 bits), Expect = 1.1e-44, Sum P(2) = 1.1e-44
Identities = 83/199 (41%), Positives = 116/199 (58%)
Query: 99 EKEQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPMDKKKVLVKVHPEGKFX 158
E + L+ L+ Q EL + G VGEV+K + ++K +VK ++
Sbjct: 35 EIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYV 94
Query: 159 XXXXXXXXXXXXTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDN 218
P RVAL + T+ + LP +VDPLV M E + +Y +GGL
Sbjct: 95 VGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSE 154
Query: 219 QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSG 278
QI+E++EVIELP+ +PELF +GI PKG LLYGPPGTGKTLLARAVA +C F++V
Sbjct: 155 QIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVS 214
Query: 279 SELVQKFIGEGSRMVRELF 297
S +V K+IGE +R++RE+F
Sbjct: 215 SSIVDKYIGESARLIREMF 233
Score = 134 (52.2 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 25/46 (54%), Positives = 35/46 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA +C F++V S +V K+IGE +R++RE+F AR
Sbjct: 192 TGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYAR 237
Score = 92 (37.4 bits), Expect = 1.1e-44, Sum P(2) = 1.1e-44
Identities = 18/46 (39%), Positives = 24/46 (52%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFE 375
R+H P IIFM +QRT++ELLNQ+DGF+
Sbjct: 237 RDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFD 282
>UNIPROTKB|P62335 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:43179 "Spermophilus tridecemlineatus" [GO:0022624
"proteasome accessory complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:U36395 PIR:JC5349 ProteinModelPortal:P62335
SMR:P62335 PRIDE:P62335 Ensembl:ENSSTOT00000014492 Uniprot:P62335
Length = 389
Score = 395 (144.1 bits), Expect = 1.1e-44, Sum P(2) = 1.1e-44
Identities = 83/199 (41%), Positives = 116/199 (58%)
Query: 99 EKEQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPMDKKKVLVKVHPEGKFX 158
E + L+ L+ Q EL + G VGEV+K + ++K +VK ++
Sbjct: 21 EIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYV 80
Query: 159 XXXXXXXXXXXXTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDN 218
P RVAL + T+ + LP +VDPLV M E + +Y +GGL
Sbjct: 81 VGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSE 140
Query: 219 QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSG 278
QI+E++EVIELP+ +PELF +GI PKG LLYGPPGTGKTLLARAVA +C F++V
Sbjct: 141 QIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVS 200
Query: 279 SELVQKFIGEGSRMVRELF 297
S +V K+IGE +R++RE+F
Sbjct: 201 SSIVDKYIGESARLIREMF 219
Score = 134 (52.2 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 25/46 (54%), Positives = 35/46 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA +C F++V S +V K+IGE +R++RE+F AR
Sbjct: 178 TGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYAR 223
Score = 92 (37.4 bits), Expect = 1.1e-44, Sum P(2) = 1.1e-44
Identities = 18/46 (39%), Positives = 24/46 (52%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFE 375
R+H P IIFM +QRT++ELLNQ+DGF+
Sbjct: 223 RDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFD 268
>MGI|MGI:1914339 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1914339
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 OMA:EHKEVES EMBL:AK012174 EMBL:AK014354
EMBL:AK144728 EMBL:AK166961 EMBL:BC043044 EMBL:BC057997
IPI:IPI00125971 RefSeq:NP_080235.2 UniGene:Mm.18472
ProteinModelPortal:P62334 SMR:P62334 IntAct:P62334 STRING:P62334
PhosphoSite:P62334 REPRODUCTION-2DPAGE:IPI00125971
REPRODUCTION-2DPAGE:P62334 PaxDb:P62334 PRIDE:P62334
Ensembl:ENSMUST00000022380 GeneID:67089 KEGG:mmu:67089
InParanoid:P62334 NextBio:323546 Bgee:P62334 Genevestigator:P62334
GermOnline:ENSMUSG00000021832 Uniprot:P62334
Length = 389
Score = 395 (144.1 bits), Expect = 1.1e-44, Sum P(2) = 1.1e-44
Identities = 83/199 (41%), Positives = 116/199 (58%)
Query: 99 EKEQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPMDKKKVLVKVHPEGKFX 158
E + L+ L+ Q EL + G VGEV+K + ++K +VK ++
Sbjct: 21 EIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYV 80
Query: 159 XXXXXXXXXXXXTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDN 218
P RVAL + T+ + LP +VDPLV M E + +Y +GGL
Sbjct: 81 VGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSE 140
Query: 219 QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSG 278
QI+E++EVIELP+ +PELF +GI PKG LLYGPPGTGKTLLARAVA +C F++V
Sbjct: 141 QIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVS 200
Query: 279 SELVQKFIGEGSRMVRELF 297
S +V K+IGE +R++RE+F
Sbjct: 201 SSIVDKYIGESARLIREMF 219
Score = 134 (52.2 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 25/46 (54%), Positives = 35/46 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA +C F++V S +V K+IGE +R++RE+F AR
Sbjct: 178 TGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYAR 223
Score = 92 (37.4 bits), Expect = 1.1e-44, Sum P(2) = 1.1e-44
Identities = 18/46 (39%), Positives = 24/46 (52%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFE 375
R+H P IIFM +QRT++ELLNQ+DGF+
Sbjct: 223 RDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFD 268
>RGD|1308825 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005886
"plasma membrane" evidence=ISO] [GO:0022624 "proteasome accessory
complex" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1308825 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 RefSeq:NP_001093979.1 UniGene:Rn.103233
GeneID:289990 KEGG:rno:289990 NextBio:630545 EMBL:BC107950
IPI:IPI00362105 ProteinModelPortal:Q32PW9 IntAct:Q32PW9
STRING:Q32PW9 PhosphoSite:Q32PW9 PRIDE:Q32PW9 UCSC:RGD:1308825
InParanoid:Q32PW9 ArrayExpress:Q32PW9 Genevestigator:Q32PW9
Uniprot:Q32PW9
Length = 381
Score = 395 (144.1 bits), Expect = 1.1e-44, Sum P(2) = 1.1e-44
Identities = 83/199 (41%), Positives = 116/199 (58%)
Query: 99 EKEQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPMDKKKVLVKVHPEGKFX 158
E + L+ L+ Q EL + G VGEV+K + ++K +VK ++
Sbjct: 13 EIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYV 72
Query: 159 XXXXXXXXXXXXTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDN 218
P RVAL + T+ + LP +VDPLV M E + +Y +GGL
Sbjct: 73 VGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSE 132
Query: 219 QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSG 278
QI+E++EVIELP+ +PELF +GI PKG LLYGPPGTGKTLLARAVA +C F++V
Sbjct: 133 QIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVS 192
Query: 279 SELVQKFIGEGSRMVRELF 297
S +V K+IGE +R++RE+F
Sbjct: 193 SSIVDKYIGESARLIREMF 211
Score = 134 (52.2 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 25/46 (54%), Positives = 35/46 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA +C F++V S +V K+IGE +R++RE+F AR
Sbjct: 170 TGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYAR 215
Score = 92 (37.4 bits), Expect = 1.1e-44, Sum P(2) = 1.1e-44
Identities = 18/46 (39%), Positives = 24/46 (52%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFE 375
R+H P IIFM +QRT++ELLNQ+DGF+
Sbjct: 215 RDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFD 260
>RGD|2318218 [details] [associations]
symbol:LOC100365869 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6-like" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:2318218
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:CH474040 KO:K03064 TIGRFAMs:TIGR01242 CTD:5706
GeneTree:ENSGT00550000074826 RefSeq:NP_001093979.1
UniGene:Rn.103233 Ensembl:ENSRNOT00000009649 GeneID:289990
KEGG:rno:289990 NextBio:630545 Uniprot:G3V6W6
Length = 403
Score = 395 (144.1 bits), Expect = 1.1e-44, Sum P(2) = 1.1e-44
Identities = 83/199 (41%), Positives = 116/199 (58%)
Query: 99 EKEQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPMDKKKVLVKVHPEGKFX 158
E + L+ L+ Q EL + G VGEV+K + ++K +VK ++
Sbjct: 35 EIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYV 94
Query: 159 XXXXXXXXXXXXTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDN 218
P RVAL + T+ + LP +VDPLV M E + +Y +GGL
Sbjct: 95 VGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSE 154
Query: 219 QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSG 278
QI+E++EVIELP+ +PELF +GI PKG LLYGPPGTGKTLLARAVA +C F++V
Sbjct: 155 QIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVS 214
Query: 279 SELVQKFIGEGSRMVRELF 297
S +V K+IGE +R++RE+F
Sbjct: 215 SSIVDKYIGESARLIREMF 233
Score = 134 (52.2 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 25/46 (54%), Positives = 35/46 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA +C F++V S +V K+IGE +R++RE+F AR
Sbjct: 192 TGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYAR 237
Score = 92 (37.4 bits), Expect = 1.1e-44, Sum P(2) = 1.1e-44
Identities = 18/46 (39%), Positives = 24/46 (52%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFE 375
R+H P IIFM +QRT++ELLNQ+DGF+
Sbjct: 237 RDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFD 282
>ZFIN|ZDB-GENE-030131-304 [details] [associations]
symbol:psmc6 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0008233 "peptidase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-304 GO:GO:0005524 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0000502 GO:GO:0017111
GO:GO:0008233 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
GeneTree:ENSGT00550000074826 OMA:NAPFDPE EMBL:BX936454
EMBL:AL954679 EMBL:BC083283 EMBL:BC152260 EMBL:BC155769
EMBL:AY648827 IPI:IPI00507865 RefSeq:NP_001003832.1
UniGene:Dr.32860 STRING:Q6DRD2 Ensembl:ENSDART00000053834
GeneID:321585 KEGG:dre:321585 InParanoid:Q6DRD2 NextBio:20807435
Uniprot:Q6DRD2
Length = 389
Score = 394 (143.8 bits), Expect = 1.4e-44, Sum P(2) = 1.4e-44
Identities = 83/199 (41%), Positives = 115/199 (57%)
Query: 99 EKEQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPMDKKKVLVKVHPEGKFX 158
E + L+ L+ Q EL + G VGEV+K + ++K +VK ++
Sbjct: 21 EIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYV 80
Query: 159 XXXXXXXXXXXXTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDN 218
P RVAL + T+ + LP +VDPLV M E +Y +GGL
Sbjct: 81 VGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGSVSYSEIGGLSE 140
Query: 219 QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSG 278
QI+E++EVIELP+ +PELF +GI PKG LLYGPPGTGKTLLARAVA +C F++V
Sbjct: 141 QIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVS 200
Query: 279 SELVQKFIGEGSRMVRELF 297
S +V K+IGE +R++RE+F
Sbjct: 201 SSIVDKYIGESARLIREMF 219
Score = 134 (52.2 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 25/46 (54%), Positives = 35/46 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA +C F++V S +V K+IGE +R++RE+F AR
Sbjct: 178 TGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYAR 223
Score = 92 (37.4 bits), Expect = 1.4e-44, Sum P(2) = 1.4e-44
Identities = 18/46 (39%), Positives = 24/46 (52%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFE 375
R+H P IIFM +QRT++ELLNQ+DGF+
Sbjct: 223 RDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFD 268
>WB|WBGene00004501 [details] [associations]
symbol:rpt-1 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0002119 GO:GO:0000003
GO:GO:0016887 GO:GO:0000502 GO:GO:0006511 EMBL:Z78012
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061
OMA:DIRWELI GeneTree:ENSGT00550000074978 PIR:T20152
RefSeq:NP_506005.1 ProteinModelPortal:Q18787 SMR:Q18787
IntAct:Q18787 MINT:MINT-212537 STRING:Q18787 PaxDb:Q18787
PRIDE:Q18787 EnsemblMetazoa:C52E4.4.1 EnsemblMetazoa:C52E4.4.2
GeneID:179641 KEGG:cel:CELE_C52E4.4 UCSC:C52E4.4.1 CTD:179641
WormBase:C52E4.4 InParanoid:Q18787 NextBio:906264 Uniprot:Q18787
Length = 435
Score = 411 (149.7 bits), Expect = 1.8e-44, Sum P(2) = 1.8e-44
Identities = 83/159 (52%), Positives = 104/159 (65%)
Query: 146 KVLVKVHPEGKFXXXXXXXXXXXXXTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
+ L+ V KF RV + Y +H LP K+DP V++M VE+
Sbjct: 112 RYLINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHLPLPAKIDPTVTMMQVEEK 171
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
PD TY VGG +QI++++EV+E P+ HPE + LGI PKGVLLYGPPGTGKTL ARAV
Sbjct: 172 PDVTYSDVGGCKDQIEKLREVVETPLLHPERYVNLGIEPPKGVLLYGPPGTGKTLCARAV 231
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKK 304
A+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 232 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKK 270
Score = 172 (65.6 bits), Expect = 5.7e-14, Sum P(2) = 5.7e-14
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 222 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTK 269
Score = 74 (31.1 bits), Expect = 1.8e-44, Sum P(2) = 1.8e-44
Identities = 14/16 (87%), Positives = 16/16 (100%)
Query: 360 VQRTMLELLNQLDGFE 375
VQRTMLEL+NQLDGF+
Sbjct: 297 VQRTMLELINQLDGFD 312
>UNIPROTKB|Q18787 [details] [associations]
symbol:rpt-1 "26S protease regulatory subunit 7"
species:6239 "Caenorhabditis elegans" [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0005737
GO:GO:0002119 GO:GO:0000003 GO:GO:0016887 GO:GO:0000502
GO:GO:0006511 EMBL:Z78012 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI
GeneTree:ENSGT00550000074978 PIR:T20152 RefSeq:NP_506005.1
ProteinModelPortal:Q18787 SMR:Q18787 IntAct:Q18787 MINT:MINT-212537
STRING:Q18787 PaxDb:Q18787 PRIDE:Q18787 EnsemblMetazoa:C52E4.4.1
EnsemblMetazoa:C52E4.4.2 GeneID:179641 KEGG:cel:CELE_C52E4.4
UCSC:C52E4.4.1 CTD:179641 WormBase:C52E4.4 InParanoid:Q18787
NextBio:906264 Uniprot:Q18787
Length = 435
Score = 411 (149.7 bits), Expect = 1.8e-44, Sum P(2) = 1.8e-44
Identities = 83/159 (52%), Positives = 104/159 (65%)
Query: 146 KVLVKVHPEGKFXXXXXXXXXXXXXTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
+ L+ V KF RV + Y +H LP K+DP V++M VE+
Sbjct: 112 RYLINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHLPLPAKIDPTVTMMQVEEK 171
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
PD TY VGG +QI++++EV+E P+ HPE + LGI PKGVLLYGPPGTGKTL ARAV
Sbjct: 172 PDVTYSDVGGCKDQIEKLREVVETPLLHPERYVNLGIEPPKGVLLYGPPGTGKTLCARAV 231
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKK 304
A+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 232 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKK 270
Score = 172 (65.6 bits), Expect = 5.7e-14, Sum P(2) = 5.7e-14
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 222 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTK 269
Score = 74 (31.1 bits), Expect = 1.8e-44, Sum P(2) = 1.8e-44
Identities = 14/16 (87%), Positives = 16/16 (100%)
Query: 360 VQRTMLELLNQLDGFE 375
VQRTMLEL+NQLDGF+
Sbjct: 297 VQRTMLELINQLDGFD 312
>FB|FBgn0028687 [details] [associations]
symbol:Rpt1 "Regulatory particle triple-A ATPase 1"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009987 "cellular process"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:AE013599 GO:GO:0005524 GO:GO:0005737
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
KO:K03061 OMA:DIRWELI GeneTree:ENSGT00550000074978 HSSP:Q9LCZ4
EMBL:AF145307 EMBL:AY061606 RefSeq:NP_477473.1 UniGene:Dm.3425
SMR:Q7KMQ0 IntAct:Q7KMQ0 STRING:Q7KMQ0 EnsemblMetazoa:FBtr0088947
GeneID:35701 KEGG:dme:Dmel_CG1341 UCSC:CG1341-RA CTD:35701
FlyBase:FBgn0028687 HOGENOM:HOG000237377 InParanoid:Q7KMQ0
OrthoDB:EOG4X3FGQ GenomeRNAi:35701 NextBio:794815 Uniprot:Q7KMQ0
Length = 433
Score = 410 (149.4 bits), Expect = 2.3e-44, Sum P(2) = 2.3e-44
Identities = 84/162 (51%), Positives = 103/162 (63%)
Query: 143 DKKKVLVKVHPEGKFXXXXXXXXXXXXXTPNCRVALRNESYTLHKILPNKVDPLVSLMMV 202
D K ++ V KF RV + Y +H LP K+DP V++M V
Sbjct: 107 DDPKYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQV 166
Query: 203 EKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 262
E PD TY VGG QI++++EV+E P+ HPE F LGI PKGVLL+GPPGTGKTL A
Sbjct: 167 EDKPDVTYSDVGGCKEQIEKLREVVETPLLHPEKFVNLGIEPPKGVLLFGPPGTGKTLCA 226
Query: 263 RAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKK 304
RAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 227 RAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARSKK 268
Score = 172 (65.6 bits), Expect = 5.6e-14, Sum P(2) = 5.6e-14
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 220 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARSK 267
Score = 74 (31.1 bits), Expect = 2.3e-44, Sum P(2) = 2.3e-44
Identities = 14/16 (87%), Positives = 16/16 (100%)
Query: 360 VQRTMLELLNQLDGFE 375
VQRTMLEL+NQLDGF+
Sbjct: 295 VQRTMLELINQLDGFD 310
>POMBASE|SPBC4.07c [details] [associations]
symbol:rpt2 "19S proteasome regulatory subunit Rpt2"
species:4896 "Schizosaccharomyces pombe" [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IGI] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 PomBase:SPBC4.07c
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0007346
GO:GO:0043161 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0016887
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0008540 KO:K03062 OMA:FIRNQER EMBL:Z29366 PIR:S39348
RefSeq:NP_595480.1 ProteinModelPortal:P36612 IntAct:P36612
STRING:P36612 PRIDE:P36612 EnsemblFungi:SPBC4.07c.1 GeneID:2540939
KEGG:spo:SPBC4.07c OrthoDB:EOG4FN7S6 NextBio:20802054
Uniprot:P36612
Length = 448
Score = 382 (139.5 bits), Expect = 2.9e-44, Sum P(2) = 2.9e-44
Identities = 79/209 (37%), Positives = 125/209 (59%)
Query: 89 KIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPMDKKKVL 148
+I + L+ E QN RL+ Q + + G+ + E++ D ++
Sbjct: 74 RIHDHLLMEEEYVQNQERLKPQDERTQEERNRVDEIRGTPMSVGT-LEEIID--DDHAIV 130
Query: 149 VKVHPEGKFXXXXXXXXXXXXXTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDS 208
PE + P C V L +++ ++ +L + DP++++M ++K P
Sbjct: 131 STAGPE--YYVSIMSFVDKDMLEPGCSVLLHHKAMSIVGLLLDDTDPMINVMKLDKAPTE 188
Query: 209 TYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH 268
+Y +GGL++QI+EIKE +ELP+ HPEL++ +GI PKGV+LYG PGTGKTLLA+AVA+
Sbjct: 189 SYADIGGLESQIQEIKEAVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQ 248
Query: 269 TECTFIRVSGSELVQKFIGEGSRMVRELF 297
T TF+RV GSEL+QK++G+G R+VR+LF
Sbjct: 249 TSATFLRVVGSELIQKYLGDGPRLVRQLF 277
Score = 147 (56.8 bits), Expect = 9.4e-14, Sum P(2) = 9.4e-14
Identities = 27/42 (64%), Positives = 37/42 (88%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 53
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G R+VR+LF
Sbjct: 236 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPRLVRQLF 277
Score = 101 (40.6 bits), Expect = 2.9e-44, Sum P(2) = 2.9e-44
Identities = 20/48 (41%), Positives = 27/48 (56%)
Query: 331 EHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEATK 378
EH+PSI+F+ +QRTMLELLNQLDGF+ ++
Sbjct: 282 EHSPSIVFIDEIDAIGTKRYDAQSGAEREIQRTMLELLNQLDGFDTSQ 329
>UNIPROTKB|E1C4V5 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
EMBL:AADN02036894 EMBL:AADN02036895 IPI:IPI00602342
Ensembl:ENSGALT00000013403 ArrayExpress:E1C4V5 Uniprot:E1C4V5
Length = 424
Score = 408 (148.7 bits), Expect = 3.7e-44, Sum P(2) = 3.7e-44
Identities = 83/159 (52%), Positives = 103/159 (64%)
Query: 146 KVLVKVHPEGKFXXXXXXXXXXXXXTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
K ++ V KF RV + Y +H LP K+DP V++M VE+
Sbjct: 101 KYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEK 160
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
PD TY VGG QI++++EV+E P+ HPE F LGI PKGVLL+GPPGTGKTL ARAV
Sbjct: 161 PDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 220
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKK 304
A+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 221 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKK 259
Score = 172 (65.6 bits), Expect = 5.1e-14, Sum P(2) = 5.1e-14
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 211 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTK 258
Score = 74 (31.1 bits), Expect = 3.7e-44, Sum P(2) = 3.7e-44
Identities = 14/16 (87%), Positives = 16/16 (100%)
Query: 360 VQRTMLELLNQLDGFE 375
VQRTMLEL+NQLDGF+
Sbjct: 286 VQRTMLELINQLDGFD 301
>UNIPROTKB|F1NFL8 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0000502 GO:GO:0006511 TIGRFAMs:TIGR01242 OMA:DIRWELI
GeneTree:ENSGT00550000074978 EMBL:AADN02036894 EMBL:AADN02036895
IPI:IPI00821647 Ensembl:ENSGALT00000039595 ArrayExpress:F1NFL8
Uniprot:F1NFL8
Length = 432
Score = 408 (148.7 bits), Expect = 3.7e-44, Sum P(2) = 3.7e-44
Identities = 83/159 (52%), Positives = 103/159 (64%)
Query: 146 KVLVKVHPEGKFXXXXXXXXXXXXXTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
K ++ V KF RV + Y +H LP K+DP V++M VE+
Sbjct: 109 KYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEK 168
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
PD TY VGG QI++++EV+E P+ HPE F LGI PKGVLL+GPPGTGKTL ARAV
Sbjct: 169 PDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 228
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKK 304
A+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 229 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKK 267
Score = 172 (65.6 bits), Expect = 5.5e-14, Sum P(2) = 5.5e-14
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 219 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTK 266
Score = 74 (31.1 bits), Expect = 3.7e-44, Sum P(2) = 3.7e-44
Identities = 14/16 (87%), Positives = 16/16 (100%)
Query: 360 VQRTMLELLNQLDGFE 375
VQRTMLEL+NQLDGF+
Sbjct: 294 VQRTMLELINQLDGFD 309
>UNIPROTKB|Q5E9F9 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9913 "Bos taurus" [GO:0000932 "cytoplasmic mRNA processing
body" evidence=ISS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0006511 HSSP:Q9WZ49 GO:GO:0000932 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 KO:K03061 OMA:DIRWELI
EMBL:BT020961 EMBL:BC102391 IPI:IPI00693210 RefSeq:NP_001015639.1
UniGene:Bt.24017 ProteinModelPortal:Q5E9F9 SMR:Q5E9F9 PRIDE:Q5E9F9
Ensembl:ENSBTAT00000065774 GeneID:530186 KEGG:bta:530186 CTD:5701
GeneTree:ENSGT00550000074978 OrthoDB:EOG4RXZ05 NextBio:20875201
Uniprot:Q5E9F9
Length = 433
Score = 408 (148.7 bits), Expect = 3.7e-44, Sum P(2) = 3.7e-44
Identities = 83/159 (52%), Positives = 103/159 (64%)
Query: 146 KVLVKVHPEGKFXXXXXXXXXXXXXTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
K ++ V KF RV + Y +H LP K+DP V++M VE+
Sbjct: 110 KYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEK 169
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
PD TY VGG QI++++EV+E P+ HPE F LGI PKGVLL+GPPGTGKTL ARAV
Sbjct: 170 PDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 229
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKK 304
A+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 230 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKK 268
Score = 172 (65.6 bits), Expect = 5.6e-14, Sum P(2) = 5.6e-14
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 220 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTK 267
Score = 74 (31.1 bits), Expect = 3.7e-44, Sum P(2) = 3.7e-44
Identities = 14/16 (87%), Positives = 16/16 (100%)
Query: 360 VQRTMLELLNQLDGFE 375
VQRTMLEL+NQLDGF+
Sbjct: 295 VQRTMLELINQLDGFD 310
>UNIPROTKB|F1PPH7 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0000502 GO:GO:0006511 TIGRFAMs:TIGR01242 KO:K03061
OMA:DIRWELI CTD:5701 GeneTree:ENSGT00550000074978 EMBL:AAEX03011248
RefSeq:XP_533103.3 ProteinModelPortal:F1PPH7
Ensembl:ENSCAFT00000006754 GeneID:475896 KEGG:cfa:475896
Uniprot:F1PPH7
Length = 433
Score = 408 (148.7 bits), Expect = 3.7e-44, Sum P(2) = 3.7e-44
Identities = 83/159 (52%), Positives = 103/159 (64%)
Query: 146 KVLVKVHPEGKFXXXXXXXXXXXXXTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
K ++ V KF RV + Y +H LP K+DP V++M VE+
Sbjct: 110 KYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEK 169
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
PD TY VGG QI++++EV+E P+ HPE F LGI PKGVLL+GPPGTGKTL ARAV
Sbjct: 170 PDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 229
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKK 304
A+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 230 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKK 268
Score = 172 (65.6 bits), Expect = 5.6e-14, Sum P(2) = 5.6e-14
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 220 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTK 267
Score = 74 (31.1 bits), Expect = 3.7e-44, Sum P(2) = 3.7e-44
Identities = 14/16 (87%), Positives = 16/16 (100%)
Query: 360 VQRTMLELLNQLDGFE 375
VQRTMLEL+NQLDGF+
Sbjct: 295 VQRTMLELINQLDGFD 310
>UNIPROTKB|P35998 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA;TAS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0000932 "cytoplasmic mRNA processing body" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0019048
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0016887
GO:GO:0051436 GO:GO:0000932 EMBL:CH471070 GO:GO:0000216
GO:GO:0000209 GO:GO:0000084 GO:GO:0031145 GO:GO:0051437
EMBL:CH236947 GO:GO:0006521 Reactome:REACT_383 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI CTD:5701 EMBL:D11094
EMBL:AB075520 EMBL:BC002589 IPI:IPI00021435 PIR:S24353
RefSeq:NP_001191382.1 RefSeq:NP_002794.1 UniGene:Hs.437366
ProteinModelPortal:P35998 SMR:P35998 DIP:DIP-27554N IntAct:P35998
MINT:MINT-1163662 STRING:P35998 PhosphoSite:P35998 DMDM:547930
OGP:P35998 REPRODUCTION-2DPAGE:IPI00021435
REPRODUCTION-2DPAGE:P35998 PaxDb:P35998 PeptideAtlas:P35998
PRIDE:P35998 DNASU:5701 Ensembl:ENST00000292644
Ensembl:ENST00000435765 GeneID:5701 KEGG:hsa:5701 UCSC:uc003vbs.3
GeneCards:GC07P102984 HGNC:HGNC:9548 HPA:HPA019238 MIM:154365
neXtProt:NX_P35998 PharmGKB:PA33893 InParanoid:P35998
PhylomeDB:P35998 ChiTaRS:PSMC2 GenomeRNAi:5701 NextBio:22150
ArrayExpress:P35998 Bgee:P35998 CleanEx:HS_PSMC2
Genevestigator:P35998 GermOnline:ENSG00000161057 Uniprot:P35998
Length = 433
Score = 408 (148.7 bits), Expect = 3.7e-44, Sum P(2) = 3.7e-44
Identities = 83/159 (52%), Positives = 103/159 (64%)
Query: 146 KVLVKVHPEGKFXXXXXXXXXXXXXTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
K ++ V KF RV + Y +H LP K+DP V++M VE+
Sbjct: 110 KYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEK 169
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
PD TY VGG QI++++EV+E P+ HPE F LGI PKGVLL+GPPGTGKTL ARAV
Sbjct: 170 PDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 229
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKK 304
A+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 230 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKK 268
Score = 172 (65.6 bits), Expect = 5.6e-14, Sum P(2) = 5.6e-14
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 220 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTK 267
Score = 74 (31.1 bits), Expect = 3.7e-44, Sum P(2) = 3.7e-44
Identities = 14/16 (87%), Positives = 16/16 (100%)
Query: 360 VQRTMLELLNQLDGFE 375
VQRTMLEL+NQLDGF+
Sbjct: 295 VQRTMLELINQLDGFD 310
>UNIPROTKB|F1SB53 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
OMA:HIFTIHA EMBL:CU570825 Ensembl:ENSSSCT00000016802 Uniprot:F1SB53
Length = 475
Score = 408 (148.7 bits), Expect = 3.7e-44, Sum P(2) = 3.7e-44
Identities = 83/159 (52%), Positives = 103/159 (64%)
Query: 146 KVLVKVHPEGKFXXXXXXXXXXXXXTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
K ++ V KF RV + Y +H LP K+DP V++M VE+
Sbjct: 152 KYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEK 211
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
PD TY VGG QI++++EV+E P+ HPE F LGI PKGVLL+GPPGTGKTL ARAV
Sbjct: 212 PDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 271
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKK 304
A+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 272 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKK 310
Score = 172 (65.6 bits), Expect = 8.1e-14, Sum P(2) = 8.1e-14
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 262 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTK 309
Score = 74 (31.1 bits), Expect = 3.7e-44, Sum P(2) = 3.7e-44
Identities = 14/16 (87%), Positives = 16/16 (100%)
Query: 360 VQRTMLELLNQLDGFE 375
VQRTMLEL+NQLDGF+
Sbjct: 337 VQRTMLELINQLDGFD 352
>UNIPROTKB|I3LJ30 [details] [associations]
symbol:I3LJ30 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
Ensembl:ENSSSCT00000030050 OMA:WDLAYEN Uniprot:I3LJ30
Length = 434
Score = 408 (148.7 bits), Expect = 3.7e-44, Sum P(2) = 3.7e-44
Identities = 83/159 (52%), Positives = 103/159 (64%)
Query: 146 KVLVKVHPEGKFXXXXXXXXXXXXXTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
K ++ V KF RV + Y +H LP K+DP V++M VE+
Sbjct: 111 KYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEK 170
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
PD TY VGG QI++++EV+E P+ HPE F LGI PKGVLL+GPPGTGKTL ARAV
Sbjct: 171 PDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 230
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKK 304
A+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 231 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKK 269
Score = 172 (65.6 bits), Expect = 5.7e-14, Sum P(2) = 5.7e-14
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 221 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTK 268
Score = 74 (31.1 bits), Expect = 3.7e-44, Sum P(2) = 3.7e-44
Identities = 14/16 (87%), Positives = 16/16 (100%)
Query: 360 VQRTMLELLNQLDGFE 375
VQRTMLEL+NQLDGF+
Sbjct: 296 VQRTMLELINQLDGFD 311
>UNIPROTKB|P46472 [details] [associations]
symbol:psmc2 "26S protease regulatory subunit 7"
species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0006511 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03061 CTD:5701 EMBL:X80157 EMBL:BC054143 PIR:S53709
RefSeq:NP_001084136.1 UniGene:Xl.57157 ProteinModelPortal:P46472
GeneID:399327 KEGG:xla:399327 Xenbase:XB-GENE-1000023
Uniprot:P46472
Length = 433
Score = 408 (148.7 bits), Expect = 3.7e-44, Sum P(2) = 3.7e-44
Identities = 83/159 (52%), Positives = 103/159 (64%)
Query: 146 KVLVKVHPEGKFXXXXXXXXXXXXXTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
K ++ V KF RV + Y +H LP K+DP V++M VE+
Sbjct: 110 KYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEK 169
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
PD TY VGG QI++++EV+E P+ HPE F LGI PKGVLL+GPPGTGKTL ARAV
Sbjct: 170 PDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 229
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKK 304
A+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 230 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKK 268
Score = 172 (65.6 bits), Expect = 5.6e-14, Sum P(2) = 5.6e-14
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 220 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTK 267
Score = 74 (31.1 bits), Expect = 3.7e-44, Sum P(2) = 3.7e-44
Identities = 14/16 (87%), Positives = 16/16 (100%)
Query: 360 VQRTMLELLNQLDGFE 375
VQRTMLEL+NQLDGF+
Sbjct: 295 VQRTMLELINQLDGFD 310
>UNIPROTKB|Q4R4R0 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9541 "Macaca fascicularis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0006511 HSSP:Q9WZ49
GO:GO:0000932 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
EMBL:AB169834 ProteinModelPortal:Q4R4R0 SMR:Q4R4R0 PRIDE:Q4R4R0
Uniprot:Q4R4R0
Length = 433
Score = 408 (148.7 bits), Expect = 3.7e-44, Sum P(2) = 3.7e-44
Identities = 83/159 (52%), Positives = 103/159 (64%)
Query: 146 KVLVKVHPEGKFXXXXXXXXXXXXXTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
K ++ V KF RV + Y +H LP K+DP V++M VE+
Sbjct: 110 KYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEK 169
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
PD TY VGG QI++++EV+E P+ HPE F LGI PKGVLL+GPPGTGKTL ARAV
Sbjct: 170 PDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 229
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKK 304
A+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 230 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKK 268
Score = 172 (65.6 bits), Expect = 5.6e-14, Sum P(2) = 5.6e-14
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 220 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTK 267
Score = 74 (31.1 bits), Expect = 3.7e-44, Sum P(2) = 3.7e-44
Identities = 14/16 (87%), Positives = 16/16 (100%)
Query: 360 VQRTMLELLNQLDGFE 375
VQRTMLEL+NQLDGF+
Sbjct: 295 VQRTMLELINQLDGFD 310
>UNIPROTKB|Q5R8D7 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9601 "Pongo abelii" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0006511 HSSP:Q01853
GO:GO:0000932 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03061 CTD:5701 EMBL:CR859816 RefSeq:NP_001126144.1
UniGene:Pab.13078 ProteinModelPortal:Q5R8D7 PRIDE:Q5R8D7
GeneID:100173102 KEGG:pon:100173102 InParanoid:Q5R8D7
Uniprot:Q5R8D7
Length = 433
Score = 408 (148.7 bits), Expect = 3.7e-44, Sum P(2) = 3.7e-44
Identities = 83/159 (52%), Positives = 103/159 (64%)
Query: 146 KVLVKVHPEGKFXXXXXXXXXXXXXTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
K ++ V KF RV + Y +H LP K+DP V++M VE+
Sbjct: 110 KYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEK 169
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
PD TY VGG QI++++EV+E P+ HPE F LGI PKGVLL+GPPGTGKTL ARAV
Sbjct: 170 PDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 229
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKK 304
A+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 230 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKK 268
Score = 172 (65.6 bits), Expect = 5.6e-14, Sum P(2) = 5.6e-14
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 220 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTK 267
Score = 74 (31.1 bits), Expect = 3.7e-44, Sum P(2) = 3.7e-44
Identities = 14/16 (87%), Positives = 16/16 (100%)
Query: 360 VQRTMLELLNQLDGFE 375
VQRTMLEL+NQLDGF+
Sbjct: 295 VQRTMLELINQLDGFD 310
>MGI|MGI:109555 [details] [associations]
symbol:Psmc2 "proteasome (prosome, macropain) 26S subunit,
ATPase 2" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006200
"ATP catabolic process" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0017025 "TBP-class protein binding"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IDA] [GO:0030163 "protein catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
MGI:MGI:109555 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0016887 GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
OrthoDB:EOG4RXZ05 ChiTaRS:PSMC2 EMBL:AK005083 EMBL:AK168548
EMBL:BC005462 EMBL:U61283 IPI:IPI00270326 PIR:S39349
UniGene:Mm.2462 ProteinModelPortal:P46471 SMR:P46471 IntAct:P46471
STRING:P46471 PhosphoSite:P46471 REPRODUCTION-2DPAGE:P46471
SWISS-2DPAGE:P46471 PaxDb:P46471 PRIDE:P46471 InParanoid:P46471
Bgee:P46471 Genevestigator:P46471 GermOnline:ENSMUSG00000028932
Uniprot:P46471
Length = 433
Score = 408 (148.7 bits), Expect = 3.7e-44, Sum P(2) = 3.7e-44
Identities = 83/159 (52%), Positives = 103/159 (64%)
Query: 146 KVLVKVHPEGKFXXXXXXXXXXXXXTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
K ++ V KF RV + Y +H LP K+DP V++M VE+
Sbjct: 110 KYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEK 169
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
PD TY VGG QI++++EV+E P+ HPE F LGI PKGVLL+GPPGTGKTL ARAV
Sbjct: 170 PDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 229
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKK 304
A+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 230 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKK 268
Score = 172 (65.6 bits), Expect = 5.6e-14, Sum P(2) = 5.6e-14
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 220 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTK 267
Score = 74 (31.1 bits), Expect = 3.7e-44, Sum P(2) = 3.7e-44
Identities = 14/16 (87%), Positives = 16/16 (100%)
Query: 360 VQRTMLELLNQLDGFE 375
VQRTMLEL+NQLDGF+
Sbjct: 295 VQRTMLELINQLDGFD 310
>ZFIN|ZDB-GENE-040426-1327 [details] [associations]
symbol:psmc2 "proteasome (prosome, macropain) 26S
subunit, ATPase 2" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-040426-1327 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
KO:K03061 OMA:DIRWELI CTD:5701 GeneTree:ENSGT00550000074978
OrthoDB:EOG4RXZ05 HSSP:Q9LCZ4 EMBL:BX571796 EMBL:BC053187
IPI:IPI00491385 RefSeq:NP_957260.1 UniGene:Dr.75589 STRING:Q7T3B1
Ensembl:ENSDART00000019647 GeneID:393941 KEGG:dre:393941
InParanoid:Q7T3B1 NextBio:20814913 Uniprot:Q7T3B1
Length = 433
Score = 408 (148.7 bits), Expect = 3.7e-44, Sum P(2) = 3.7e-44
Identities = 83/159 (52%), Positives = 103/159 (64%)
Query: 146 KVLVKVHPEGKFXXXXXXXXXXXXXTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
K ++ V KF RV + Y +H LP K+DP V++M VE+
Sbjct: 110 KYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEK 169
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
PD TY VGG QI++++EV+E P+ HPE F LGI PKGVLL+GPPGTGKTL ARAV
Sbjct: 170 PDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 229
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKK 304
A+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 230 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKK 268
Score = 172 (65.6 bits), Expect = 5.6e-14, Sum P(2) = 5.6e-14
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 220 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTK 267
Score = 74 (31.1 bits), Expect = 3.7e-44, Sum P(2) = 3.7e-44
Identities = 14/16 (87%), Positives = 16/16 (100%)
Query: 360 VQRTMLELLNQLDGFE 375
VQRTMLEL+NQLDGF+
Sbjct: 295 VQRTMLELINQLDGFD 310
>TAIR|locus:2024822 [details] [associations]
symbol:RPT1A "regulatory particle triple-A 1A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 EMBL:AC009324 EMBL:AC024260
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123390 EMBL:AY062860 EMBL:BT000069 IPI:IPI00548766
PIR:G96577 RefSeq:NP_175778.1 UniGene:At.66918
ProteinModelPortal:Q9SSB5 SMR:Q9SSB5 IntAct:Q9SSB5 STRING:Q9SSB5
PaxDb:Q9SSB5 PRIDE:Q9SSB5 EnsemblPlants:AT1G53750.1 GeneID:841812
KEGG:ath:AT1G53750 GeneFarm:2748 TAIR:At1g53750 InParanoid:Q9SSB5
KO:K03061 OMA:DIRWELI PhylomeDB:Q9SSB5 ProtClustDB:CLSN2682130
Genevestigator:Q9SSB5 GermOnline:AT1G53750 Uniprot:Q9SSB5
Length = 426
Score = 407 (148.3 bits), Expect = 3.7e-44, Sum P(2) = 3.7e-44
Identities = 85/169 (50%), Positives = 108/169 (63%)
Query: 137 EVVKP-MDKKKVLVKVHPEGKFXXXXXXXXXXXXXTPNCRVALRNESYTLHKILPNKVDP 195
+++ P + K ++ V KF RV + Y + LP K+DP
Sbjct: 93 KIISPNTEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDP 152
Query: 196 LVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPG 255
V++M VE+ PD TY VGG QI++++EV+ELP+ HPE F LGI PKGVL YGPPG
Sbjct: 153 SVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPG 212
Query: 256 TGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKK 304
TGKTLLARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 213 TGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKK 261
Score = 177 (67.4 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTLLARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 213 TGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSK 260
Score = 75 (31.5 bits), Expect = 3.7e-44, Sum P(2) = 3.7e-44
Identities = 14/17 (82%), Positives = 17/17 (100%)
Query: 360 VQRTMLELLNQLDGFEA 376
VQRTMLE++NQLDGF+A
Sbjct: 288 VQRTMLEIVNQLDGFDA 304
>ASPGD|ASPL0000032311 [details] [associations]
symbol:AN5747 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IEA] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IEA] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IEA] [GO:0030433 "ER-associated protein
catabolic process" evidence=IEA] [GO:0006289 "nucleotide-excision
repair" evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001305 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 OMA:EHKEVES
EnsemblFungi:CADANIAT00003315 Uniprot:C8VFJ3
Length = 393
Score = 388 (141.6 bits), Expect = 3.7e-44, Sum P(2) = 3.7e-44
Identities = 82/203 (40%), Positives = 121/203 (59%)
Query: 95 LIVAEKEQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPMDKKKVLVKVHPE 154
L + E E L+ L+ +L + + G +GEV+K +D+++ +VK
Sbjct: 21 LDLREWEAKLKALRMGIKDLQREFDISEENIKALQSVGQIIGEVLKQLDEERFIVKASSG 80
Query: 155 GKFXXXXXXXXXXXXXTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVG 214
++ RVAL + T+ ++LP +VDPLV M +E + +G
Sbjct: 81 PRYVVGCRSKVDRSKLKQGTRVALDMTTLTIMRMLPREVDPLVYNMSLEDPGQINFAGIG 140
Query: 215 GLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFI 274
GL++QI+E++EVIELP+K+PELF +GI PKGVLLYGPPGTGKTLLARAVA E F+
Sbjct: 141 GLNDQIRELREVIELPLKNPELFQRVGIKPPKGVLLYGPPGTGKTLLARAVASSMETNFL 200
Query: 275 RVSGSELVQKFIGEGSRMVRELF 297
+V S +V K+IGE +R++RE+F
Sbjct: 201 KVVSSAIVDKYIGESARLIREMF 223
Score = 122 (48.0 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 24/46 (52%), Positives = 34/46 (73%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA E F++V S +V K+IGE +R++RE+F A+
Sbjct: 182 TGKTLLARAVASSMETNFLKVVSSAIVDKYIGESARLIREMFGYAK 227
Score = 94 (38.1 bits), Expect = 3.7e-44, Sum P(2) = 3.7e-44
Identities = 19/46 (41%), Positives = 24/46 (52%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFE 375
+EH P IIFM +QRT++ELLNQLDGF+
Sbjct: 227 KEHEPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFD 272
>TAIR|locus:2028200 [details] [associations]
symbol:AT1G45000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005618
"cell wall" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0000502
"proteasome complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0030244
"cellulose biosynthetic process" evidence=RCA] [GO:0048193 "Golgi
vesicle transport" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0009506 GO:GO:0005524
GO:GO:0005737 GO:GO:0005618 GO:GO:0005730 GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AC007915 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 OMA:EHKEVES
ProtClustDB:CLSN2679874 EMBL:AY062709 EMBL:AY114673 IPI:IPI00531336
RefSeq:NP_175120.1 UniGene:At.27257 ProteinModelPortal:Q9MAK9
SMR:Q9MAK9 IntAct:Q9MAK9 STRING:Q9MAK9 PaxDb:Q9MAK9 PRIDE:Q9MAK9
EnsemblPlants:AT1G45000.1 GeneID:841065 KEGG:ath:AT1G45000
GeneFarm:2760 TAIR:At1g45000 InParanoid:Q9MAK9 PhylomeDB:Q9MAK9
Uniprot:Q9MAK9
Length = 399
Score = 385 (140.6 bits), Expect = 3.7e-44, Sum P(2) = 3.7e-44
Identities = 85/230 (36%), Positives = 134/230 (58%)
Query: 71 DVDEAIKSSEGFKPYYVTKI---EELQLIVAEKEQNLRRLQAQRNELNAKVRMLRXXXXX 127
D D+A + Y K+ +EL+ V +NLR + + N+ ++ L+
Sbjct: 3 DGDDAARRRTAAVTDYRKKLLHHKELESRVRTARENLRAAKKEFNKTEDDLKSLQSV--- 59
Query: 128 XXXXGSYVGEVVKPMDKKKVLVKVHPEGKFXXXXXXXXXXXXXTPNCRVALRNESYTLHK 187
G +GEV++P+D ++++VK ++ T RV L + T+ +
Sbjct: 60 ----GQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMR 115
Query: 188 ILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKG 247
LP +VDP+V M+ E + +Y VGGL +QI+E++E IELP+ +PELF +GI PKG
Sbjct: 116 ALPREVDPVVYNMLHEDPGNISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKG 175
Query: 248 VLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 297
VLLYGPPGTGKTLLARA+A + + F++V S ++ K+IGE +R++RE+F
Sbjct: 176 VLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF 225
Score = 123 (48.4 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 22/46 (47%), Positives = 35/46 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARA+A + + F++V S ++ K+IGE +R++RE+F AR
Sbjct: 184 TGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAR 229
Score = 97 (39.2 bits), Expect = 3.7e-44, Sum P(2) = 3.7e-44
Identities = 20/46 (43%), Positives = 24/46 (52%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFE 375
REH P IIFM +QRT++ELLNQLDGF+
Sbjct: 229 REHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFD 274
>ASPGD|ASPL0000049719 [details] [associations]
symbol:AN2213 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0043171 "peptide catabolic process"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:BN001307
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER
OrthoDB:EOG4FN7S6 EMBL:AACD01000035 RefSeq:XP_659817.1
ProteinModelPortal:Q5BB67 STRING:Q5BB67
EnsemblFungi:CADANIAT00008897 GeneID:2875757 KEGG:ani:AN2213.2
Uniprot:Q5BB67
Length = 460
Score = 380 (138.8 bits), Expect = 3.7e-44, Sum P(2) = 3.7e-44
Identities = 79/216 (36%), Positives = 126/216 (58%)
Query: 86 YVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPMDKK 145
YV +E L+ A + R + NA R R G VG + + +D
Sbjct: 82 YVENMERLRKAKASASDSANRGDVDITDRNADERS-RVDDMRGSPMG--VGNLEELIDDD 138
Query: 146 KVLVKVHPEGKFXXXXXXXXXXXXXTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
+V ++ P + L +++ ++ +L + DPLVS+M ++K
Sbjct: 139 HAIVSSATGPEYYVSIMSFVDKDLLEPGASILLHHKTVSVVGVLTEESDPLVSVMKLDKA 198
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
P +Y +GGL++QI+E++E +ELP+ HPEL++ +GI PKGV+LYG PGTGKTLLA+AV
Sbjct: 199 PTESYADIGGLESQIQEVRESVELPLLHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAV 258
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAS 301
A+ T TF+R+ GSEL+QK++G+G R+VR++F +A+
Sbjct: 259 ANQTSATFLRIVGSELIQKYLGDGPRLVRQIFQVAA 294
Score = 147 (56.8 bits), Expect = 8.1e-14, Sum P(2) = 8.1e-14
Identities = 26/45 (57%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+R+ GSEL+QK++G+G R+VR++F +A
Sbjct: 249 TGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPRLVRQIFQVA 293
Score = 102 (41.0 bits), Expect = 3.7e-44, Sum P(2) = 3.7e-44
Identities = 21/45 (46%), Positives = 25/45 (55%)
Query: 331 EHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFE 375
EHAPSI+F+ +QRTMLELLNQLDGF+
Sbjct: 295 EHAPSIVFIDEIDAIGTKRYDSTSGGEREIQRTMLELLNQLDGFD 339
>TAIR|locus:2061639 [details] [associations]
symbol:RPT2b "regulatory particle AAA-ATPase 2b"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0007292
"female gamete generation" evidence=IGI] [GO:0010078 "maintenance
of root meristem identity" evidence=IMP] [GO:0048232 "male gamete
generation" evidence=IGI] [GO:0042023 "DNA endoreduplication"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051510 "regulation of unidimensional cell
growth" evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 EMBL:AC006081 GO:GO:0007292
GO:GO:0010078 HSSP:P43773 GO:GO:0048232 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 UniGene:At.24596 KO:K03062
ProtClustDB:CLSN2683303 EMBL:AF372977 EMBL:AY035072 EMBL:AY056335
EMBL:AY087584 IPI:IPI00521093 PIR:E84585 RefSeq:NP_179604.1
UniGene:At.13496 ProteinModelPortal:Q9SL67 SMR:Q9SL67 IntAct:Q9SL67
STRING:Q9SL67 PaxDb:Q9SL67 PRIDE:Q9SL67 EnsemblPlants:AT2G20140.1
GeneID:816533 KEGG:ath:AT2G20140 GeneFarm:1495 TAIR:At2g20140
InParanoid:Q9SL67 OMA:FIRNQER PhylomeDB:Q9SL67 Uniprot:Q9SL67
Length = 443
Score = 395 (144.1 bits), Expect = 4.7e-44, Sum P(2) = 4.7e-44
Identities = 85/212 (40%), Positives = 126/212 (59%)
Query: 89 KIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPMDKKKVL 148
+I++ L+ E N RL+ Q K R VG + + +D+ +
Sbjct: 70 RIKDYLLMEEEFVANQERLKPQEE----KAEEDRSKVDDLRGTPMSVGNLEELIDENHAI 125
Query: 149 VKVHPEGKFXXXXXXXXXXXXXTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDS 208
V ++ P C + + N+ ++ IL ++VDP+VS+M VEK P
Sbjct: 126 VSSSVGPEYYVGILSFVDKDQLEPGCSILMHNKVLSVVGILQDEVDPMVSVMKVEKAPLE 185
Query: 209 TYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH 268
+Y +GGL+ QI+EIKE +ELP+ HPEL++ +GI PKGV+LYG PGTGKTLLA+AVA+
Sbjct: 186 SYADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANS 245
Query: 269 TECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 246 TSATFLRVVGSELIQKYLGDGPKLVRELFRVA 277
Score = 148 (57.2 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 233 TGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 277
Score = 86 (35.3 bits), Expect = 4.7e-44, Sum P(2) = 4.7e-44
Identities = 18/44 (40%), Positives = 24/44 (54%)
Query: 333 APSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEA 376
+PSI+F+ +QRTMLELLNQLDGF++
Sbjct: 281 SPSIVFIDEIDAVGTKRYDANSGGEREIQRTMLELLNQLDGFDS 324
>TAIR|locus:2119926 [details] [associations]
symbol:RPT2a "regulatory particle AAA-ATPase 2A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0009933 "meristem structural organization" evidence=IMP]
[GO:0009965 "leaf morphogenesis" evidence=IMP] [GO:0010015 "root
morphogenesis" evidence=IMP] [GO:0010078 "maintenance of root
meristem identity" evidence=IMP] [GO:0010311 "lateral root
formation" evidence=IMP] [GO:0035266 "meristem growth"
evidence=IMP] [GO:0048367 "shoot system development" evidence=IMP]
[GO:0048827 "phyllome development" evidence=IMP] [GO:0048829 "root
cap development" evidence=IMP] [GO:0046686 "response to cadmium
ion" evidence=IEP;RCA] [GO:0016020 "membrane" evidence=IDA]
[GO:0009408 "response to heat" evidence=IMP] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=RCA;IMP] [GO:0043248 "proteasome assembly"
evidence=RCA;IMP] [GO:0048364 "root development" evidence=IMP]
[GO:0051788 "response to misfolded protein" evidence=RCA;IMP]
[GO:0080129 "proteasome core complex assembly" evidence=RCA;IMP]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0005829
"cytosol" evidence=RCA] [GO:0007292 "female gamete generation"
evidence=IGI] [GO:0048232 "male gamete generation" evidence=IGI]
[GO:0090351 "seedling development" evidence=IMP] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006096 "glycolysis"
evidence=RCA] [GO:0006635 "fatty acid beta-oxidation" evidence=RCA]
[GO:0009407 "toxin catabolic process" evidence=RCA] [GO:0009651
"response to salt stress" evidence=RCA] [GO:0009853
"photorespiration" evidence=RCA] [GO:0042023 "DNA
endoreduplication" evidence=RCA] [GO:0051510 "regulation of
unidimensional cell growth" evidence=RCA] [GO:0060968 "regulation
of gene silencing" evidence=IMP] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0046686 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0043161 GO:GO:0016020 EMBL:AL078470
EMBL:AL161574 GO:GO:0009408 GO:GO:0010311 GO:GO:0048829
GO:GO:0000502 GO:GO:0043248 GO:GO:0017111 GO:GO:0009965
GO:GO:0009933 EMBL:AL078469 GO:GO:0007292 GO:GO:0060968
GO:GO:0010078 HSSP:P43773 GO:GO:0051788 GO:GO:0090351 GO:GO:0048232
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123391 EMBL:AB161192 EMBL:AY034975 IPI:IPI00538666
PIR:T08959 RefSeq:NP_194633.1 UniGene:At.24596
ProteinModelPortal:Q9SZD4 SMR:Q9SZD4 IntAct:Q9SZD4 STRING:Q9SZD4
PaxDb:Q9SZD4 PRIDE:Q9SZD4 EnsemblPlants:AT4G29040.1 GeneID:829025
KEGG:ath:AT4G29040 GeneFarm:1494 TAIR:At4g29040 InParanoid:Q9SZD4
KO:K03062 OMA:SAIVMEA PhylomeDB:Q9SZD4 ProtClustDB:CLSN2683303
GO:GO:0035266 Uniprot:Q9SZD4
Length = 443
Score = 395 (144.1 bits), Expect = 4.7e-44, Sum P(2) = 4.7e-44
Identities = 85/212 (40%), Positives = 126/212 (59%)
Query: 89 KIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPMDKKKVL 148
+I++ L+ E N RL+ Q K R VG + + +D+ +
Sbjct: 70 RIKDYLLMEEEFVANQERLKPQEE----KAEEDRSKVDDLRGTPMSVGNLEELIDENHAI 125
Query: 149 VKVHPEGKFXXXXXXXXXXXXXTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDS 208
V ++ P C + + N+ ++ IL ++VDP+VS+M VEK P
Sbjct: 126 VSSSVGPEYYVGILSFVDKDQLEPGCSILMHNKVLSVVGILQDEVDPMVSVMKVEKAPLE 185
Query: 209 TYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH 268
+Y +GGL+ QI+EIKE +ELP+ HPEL++ +GI PKGV+LYG PGTGKTLLA+AVA+
Sbjct: 186 SYADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANS 245
Query: 269 TECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 246 TSATFLRVVGSELIQKYLGDGPKLVRELFRVA 277
Score = 148 (57.2 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 28/45 (62%), Positives = 39/45 (86%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A
Sbjct: 233 TGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 277
Score = 86 (35.3 bits), Expect = 4.7e-44, Sum P(2) = 4.7e-44
Identities = 18/44 (40%), Positives = 24/44 (54%)
Query: 333 APSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEA 376
+PSI+F+ +QRTMLELLNQLDGF++
Sbjct: 281 SPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDS 324
>UNIPROTKB|B7Z5E2 [details] [associations]
symbol:PSMC2 "cDNA FLJ52353, highly similar to 26S protease
regulatory subunit 7" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0030163 GO:GO:0017111 GO:GO:0008233 EMBL:AC004668
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 UniGene:Hs.437366
HGNC:HGNC:9548 ChiTaRS:PSMC2 EMBL:AC093701 EMBL:AK298821
IPI:IPI01015219 SMR:B7Z5E2 STRING:B7Z5E2 Ensembl:ENST00000544811
Uniprot:B7Z5E2
Length = 296
Score = 403 (146.9 bits), Expect = 1.2e-43, Sum P(2) = 1.2e-43
Identities = 79/130 (60%), Positives = 97/130 (74%)
Query: 175 RVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHP 234
RV + Y +H LP K+DP V++M VE+ PD TY VGG QI++++EV+E P+ HP
Sbjct: 2 RVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHP 61
Query: 235 ELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVR 294
E F LGI PKGVLL+GPPGTGKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVR
Sbjct: 62 ERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVR 121
Query: 295 ELFVMASLKK 304
ELF MA KK
Sbjct: 122 ELFEMARTKK 131
Score = 172 (65.6 bits), Expect = 5.7e-15, Sum P(2) = 5.7e-15
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 83 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTK 130
Score = 74 (31.1 bits), Expect = 1.2e-43, Sum P(2) = 1.2e-43
Identities = 14/16 (87%), Positives = 16/16 (100%)
Query: 360 VQRTMLELLNQLDGFE 375
VQRTMLEL+NQLDGF+
Sbjct: 158 VQRTMLELINQLDGFD 173
>CGD|CAL0005257 [details] [associations]
symbol:RPT2 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045732 "positive regulation
of protein catabolic process" evidence=IEA] [GO:0043171 "peptide
catabolic process" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005257 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 EMBL:AACQ01000051 EMBL:AACQ01000050
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03062 RefSeq:XP_717718.1
RefSeq:XP_717812.1 ProteinModelPortal:Q5A7M6 STRING:Q5A7M6
GeneID:3640525 GeneID:3640683 KEGG:cal:CaO19.12895
KEGG:cal:CaO19.5440 Uniprot:Q5A7M6
Length = 465
Score = 378 (138.1 bits), Expect = 1.2e-43, Sum P(2) = 1.2e-43
Identities = 69/167 (41%), Positives = 110/167 (65%)
Query: 135 VGEVVKPMDKKKVLVKVHPEGKFXXXXXXXXXXXXXTPNCRVALRNESYTLHKILPNKVD 194
+G + + +D +V ++ P C V L +++ + +L + D
Sbjct: 110 IGTLEEIIDDDHAIVSSTASSEYYVSIMSFVDKGLLEPGCSVLLHHKTVAVVGVLQDDAD 169
Query: 195 PLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPP 254
P+VS+M ++K P +Y +GGL++QI+EIKE +ELP+ HPEL++ +GI PKGV+LYG P
Sbjct: 170 PMVSVMKLDKSPTESYADIGGLESQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAP 229
Query: 255 GTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAS 301
GTGKTLLA+AVA+ T TF+R+ GSEL+QK++G+G R+ R++F +A+
Sbjct: 230 GTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPRLCRQIFQIAA 276
Score = 142 (55.0 bits), Expect = 6.6e-13, Sum P(2) = 6.6e-13
Identities = 25/45 (55%), Positives = 38/45 (84%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKTLLA+AVA+ T TF+R+ GSEL+QK++G+G R+ R++F +A
Sbjct: 231 TGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPRLCRQIFQIA 275
Score = 99 (39.9 bits), Expect = 1.2e-43, Sum P(2) = 1.2e-43
Identities = 20/45 (44%), Positives = 25/45 (55%)
Query: 331 EHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFE 375
+HAPSI+F+ +QRTMLELLNQLDGF+
Sbjct: 277 DHAPSIVFIDEIDAIGTKRYESTSGGEREIQRTMLELLNQLDGFD 321
>RGD|3428 [details] [associations]
symbol:Psmc2 "proteasome (prosome, macropain) 26S subunit, ATPase
2" species:10116 "Rattus norvegicus" [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=IEA;ISO] [GO:0006200 "ATP
catabolic process" evidence=ISO] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA;ISO] [GO:0016887 "ATPase
activity" evidence=IEA;ISO] [GO:0017025 "TBP-class protein binding"
evidence=IPI] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA;ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:3428 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03061
CTD:5701 OrthoDB:EOG4RXZ05 EMBL:D50694 EMBL:BC061542 EMBL:U13895
IPI:IPI00421600 RefSeq:NP_150239.1 UniGene:Rn.1202
ProteinModelPortal:Q63347 IntAct:Q63347 MINT:MINT-1794034
STRING:Q63347 PhosphoSite:Q63347 PRIDE:Q63347 GeneID:25581
KEGG:rno:25581 InParanoid:Q63347 NextBio:607227 Genevestigator:Q63347
GermOnline:ENSRNOG00000012026 Uniprot:Q63347
Length = 433
Score = 401 (146.2 bits), Expect = 2.0e-43, Sum P(2) = 2.0e-43
Identities = 82/159 (51%), Positives = 102/159 (64%)
Query: 146 KVLVKVHPEGKFXXXXXXXXXXXXXTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
K ++ V KF RV + Y +H LP K+DP V++M VE+
Sbjct: 110 KYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEK 169
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
PD TY VGG QI++++EV+E P+ HPE F LGI PKGVLL+GPPGTGKTL ARAV
Sbjct: 170 PDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 229
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKK 304
A+ T+ FI V GSELVQK++GEG+RMVRELF MA KK
Sbjct: 230 ANRTDACFIPVIGSELVQKYVGEGARMVRELFEMARTKK 268
Score = 165 (63.1 bits), Expect = 3.9e-13, Sum P(2) = 3.9e-13
Identities = 34/48 (70%), Positives = 40/48 (83%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FI V GSELVQK++GEG+RMVRELF MAR K
Sbjct: 220 TGKTLCARAVANRTDACFIPVIGSELVQKYVGEGARMVRELFEMARTK 267
Score = 74 (31.1 bits), Expect = 2.0e-43, Sum P(2) = 2.0e-43
Identities = 14/16 (87%), Positives = 16/16 (100%)
Query: 360 VQRTMLELLNQLDGFE 375
VQRTMLEL+NQLDGF+
Sbjct: 295 VQRTMLELINQLDGFD 310
>UNIPROTKB|Q63347 [details] [associations]
symbol:Psmc2 "26S protease regulatory subunit 7"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 RGD:3428 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0016887 GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03061 CTD:5701 OrthoDB:EOG4RXZ05
EMBL:D50694 EMBL:BC061542 EMBL:U13895 IPI:IPI00421600
RefSeq:NP_150239.1 UniGene:Rn.1202 ProteinModelPortal:Q63347
IntAct:Q63347 MINT:MINT-1794034 STRING:Q63347 PhosphoSite:Q63347
PRIDE:Q63347 GeneID:25581 KEGG:rno:25581 InParanoid:Q63347
NextBio:607227 Genevestigator:Q63347 GermOnline:ENSRNOG00000012026
Uniprot:Q63347
Length = 433
Score = 401 (146.2 bits), Expect = 2.0e-43, Sum P(2) = 2.0e-43
Identities = 82/159 (51%), Positives = 102/159 (64%)
Query: 146 KVLVKVHPEGKFXXXXXXXXXXXXXTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
K ++ V KF RV + Y +H LP K+DP V++M VE+
Sbjct: 110 KYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEK 169
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
PD TY VGG QI++++EV+E P+ HPE F LGI PKGVLL+GPPGTGKTL ARAV
Sbjct: 170 PDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 229
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKK 304
A+ T+ FI V GSELVQK++GEG+RMVRELF MA KK
Sbjct: 230 ANRTDACFIPVIGSELVQKYVGEGARMVRELFEMARTKK 268
Score = 165 (63.1 bits), Expect = 3.9e-13, Sum P(2) = 3.9e-13
Identities = 34/48 (70%), Positives = 40/48 (83%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ FI V GSELVQK++GEG+RMVRELF MAR K
Sbjct: 220 TGKTLCARAVANRTDACFIPVIGSELVQKYVGEGARMVRELFEMARTK 267
Score = 74 (31.1 bits), Expect = 2.0e-43, Sum P(2) = 2.0e-43
Identities = 14/16 (87%), Positives = 16/16 (100%)
Query: 360 VQRTMLELLNQLDGFE 375
VQRTMLEL+NQLDGF+
Sbjct: 295 VQRTMLELINQLDGFD 310
>CGD|CAL0005689 [details] [associations]
symbol:RPT1 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0045899 "positive regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005689 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 EMBL:AACQ01000078 EMBL:AACQ01000077
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061
RefSeq:XP_715876.1 RefSeq:XP_715926.1 ProteinModelPortal:Q5A2A0
STRING:Q5A2A0 GeneID:3642412 GeneID:3642461 KEGG:cal:CaO19.441
KEGG:cal:CaO19.8071 Uniprot:Q5A2A0
Length = 444
Score = 405 (147.6 bits), Expect = 3.2e-43, Sum P(2) = 3.2e-43
Identities = 104/280 (37%), Positives = 149/280 (53%)
Query: 29 FIRVSGSELVQKF--IGEGSRMVRELFVMARCKGSSRGTEFFTMDVDEAIKSSEGFKPYY 86
+I S E +K + EG V + + A S + E ++E IK+++G K
Sbjct: 10 YIPPSEEETSEKITPLTEGDIQVLKTYGTAPYADSLKEIEKDLKTIEERIKTNQGIKESD 69
Query: 87 VTKIEELQL--IVAEKEQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPMDK 144
T + L ++ +K+ R+Q +++ A+ + G + K
Sbjct: 70 -TGLAPPHLWDVLGDKQ----RMQEEQSLQVARCTKIIEASQPQQPTGLQNADT-----K 119
Query: 145 KKVLVKVHPEGKFXXXXXXXXXXXXXTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEK 204
K ++ + KF RV + Y + LP ++DP V++M VE+
Sbjct: 120 SKYVINIKQIAKFVVGLGERLSPTDIEEGMRVGVDRHKYEIQLPLPPRIDPSVTMMTVEE 179
Query: 205 VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 264
PD TY VGG QI++++EV+ELP+ PE F LGI PKG+LLYGPPGTGKTL ARA
Sbjct: 180 KPDVTYSDVGGCKEQIEKLREVVELPLLSPERFVKLGIDPPKGILLYGPPGTGKTLCARA 239
Query: 265 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKK 304
VA+ T+ TFIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 240 VANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKK 279
Score = 178 (67.7 bits), Expect = 4.9e-14, Sum P(2) = 4.9e-14
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 231 TGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTK 278
Score = 68 (29.0 bits), Expect = 3.2e-43, Sum P(2) = 3.2e-43
Identities = 13/16 (81%), Positives = 15/16 (93%)
Query: 360 VQRTMLELLNQLDGFE 375
VQRTMLEL+ QLDGF+
Sbjct: 306 VQRTMLELITQLDGFD 321
>POMBASE|SPCC1682.16 [details] [associations]
symbol:rpt4 "19S proteasome regulatory subunit Rpt4
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISO] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISM] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=NAS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC1682.16 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0007346 GO:GO:0043161 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0016887 GO:GO:0004175 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PIR:T41073
PIR:T41279 RefSeq:NP_587809.2 ProteinModelPortal:O74445
STRING:O74445 PRIDE:O74445 EnsemblFungi:SPCC1682.16.1
GeneID:2539189 KEGG:spo:SPCC1682.16 OMA:DKERFIV OrthoDB:EOG40KC79
NextBio:20800360 Uniprot:O74445
Length = 388
Score = 381 (139.2 bits), Expect = 4.1e-43, Sum P(2) = 4.1e-43
Identities = 82/199 (41%), Positives = 117/199 (58%)
Query: 99 EKEQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPMDKKKVLVKVHPEGKFX 158
E + L+ L+ +L K G +GEV+K +D ++ +VK ++
Sbjct: 20 EWDSKLKDLRFGNRDLVKKYDKTEDDIKSLQSVGQIIGEVLKQLDSERFIVKASSGPRYV 79
Query: 159 XXXXXXXXXXXXTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDN 218
RV+L + T+ +ILP +VDPLV M +E D ++ VGGL+
Sbjct: 80 VGCRNNVDQSHLVQGVRVSLDMTTLTIMRILPREVDPLVYNMSIEDPGDISFAGVGGLNE 139
Query: 219 QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSG 278
QI+E++EVIELP+K+PELF +GI PKGVLLYGPPGTGKTLLARAVA F++V
Sbjct: 140 QIRELREVIELPLKNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAVAASLGVNFLKVVS 199
Query: 279 SELVQKFIGEGSRMVRELF 297
S +V K+IGE +R++RE+F
Sbjct: 200 SAIVDKYIGESARIIREMF 218
Score = 113 (44.8 bits), Expect = 5.3e-09, Sum P(2) = 5.3e-09
Identities = 23/46 (50%), Positives = 33/46 (71%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA F++V S +V K+IGE +R++RE+F A+
Sbjct: 177 TGKTLLARAVAASLGVNFLKVVSSAIVDKYIGESARIIREMFGYAK 222
Score = 91 (37.1 bits), Expect = 4.1e-43, Sum P(2) = 4.1e-43
Identities = 17/46 (36%), Positives = 24/46 (52%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFE 375
+EH P +IFM +QRT++ELLNQ+DGF+
Sbjct: 222 KEHEPCVIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFD 267
>DICTYBASE|DDB_G0270784 [details] [associations]
symbol:psmC1 "TAT binding protein alpha"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030587 "sorocarp development"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0270784 GO:GO:0005524 GO:GO:0005634
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0045335
GO:GO:0030587 GO:GO:0000910 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 HSSP:Q9WZ49 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03062 OMA:FIRNQER RefSeq:XP_646726.1 ProteinModelPortal:Q55BV5
STRING:Q55BV5 PRIDE:Q55BV5 EnsemblProtists:DDB0232964
GeneID:8617698 KEGG:ddi:DDB_G0270784 ProtClustDB:PTZ00361
Uniprot:Q55BV5
Length = 439
Score = 378 (138.1 bits), Expect = 4.1e-43, Sum P(2) = 4.1e-43
Identities = 68/125 (54%), Positives = 99/125 (79%)
Query: 176 VALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPE 235
V L N++ ++ ++ +VDP+V++M VEK P +Y +GGL+ Q++E+KE IELP+ HPE
Sbjct: 149 VLLNNKTLSVVGVIDGEVDPMVNVMKVEKAPTESYSDIGGLEAQVQEMKEAIELPLTHPE 208
Query: 236 LFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRE 295
L++ +GI PKGV+LYG PGTGKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRE
Sbjct: 209 LYEEIGIKPPKGVILYGEPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRE 268
Query: 296 LFVMA 300
LF +A
Sbjct: 269 LFRVA 273
Score = 150 (57.9 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 30/51 (58%), Positives = 41/51 (80%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA-RCKGS 61
+GKTLLA+AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A C S
Sbjct: 229 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVADECAPS 279
Score = 94 (38.1 bits), Expect = 4.1e-43, Sum P(2) = 4.1e-43
Identities = 21/46 (45%), Positives = 25/46 (54%)
Query: 331 EHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEA 376
E APSI+F+ +QRTMLELLNQLDGF+A
Sbjct: 275 ECAPSIVFIDEIDAVGTKRYDSQSGGEREIQRTMLELLNQLDGFDA 320
>WB|WBGene00004504 [details] [associations]
symbol:rpt-4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 378 (138.1 bits), Expect = 4.1e-43, Sum P(2) = 4.1e-43
Identities = 80/197 (40%), Positives = 116/197 (58%)
Query: 101 EQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPMDKKKVLVKVHPEGKFXXX 160
EQ L+ L+ + +E+ + G VGEV+K + ++K +VK ++
Sbjct: 40 EQKLKDLRKKESEMTKQFDKSENDIKSLQSVGQIVGEVLKQLSEEKFIVKATNGPRYVVG 99
Query: 161 XXXXXXXXXXTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQI 220
RV+L + T+ + LP +VDPLV M E + +Y VGGL QI
Sbjct: 100 CRRSINKEELKQGTRVSLDMTTLTIMRQLPREVDPLVYKMSHEDPGNISYSDVGGLAEQI 159
Query: 221 KEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSE 280
+E++EV+ELP+ +PELF +GI PKG LL+GPPGTGKTLLARAVA +C F++V S
Sbjct: 160 RELREVVELPLINPELFKRVGITPPKGCLLFGPPGTGKTLLARAVASQLDCNFLKVVSSA 219
Query: 281 LVQKFIGEGSRMVRELF 297
+V K+IGE +RM+RE+F
Sbjct: 220 IVDKYIGESARMIREMF 236
Score = 136 (52.9 bits), Expect = 6.7e-12, Sum P(2) = 6.7e-12
Identities = 26/46 (56%), Positives = 35/46 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA +C F++V S +V K+IGE +RM+RE+F AR
Sbjct: 195 TGKTLLARAVASQLDCNFLKVVSSAIVDKYIGESARMIREMFNYAR 240
Score = 94 (38.1 bits), Expect = 4.1e-43, Sum P(2) = 4.1e-43
Identities = 18/47 (38%), Positives = 25/47 (53%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEA 376
R+H P I+FM +QRT++ELLNQLDGF++
Sbjct: 240 RDHQPCIVFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDS 286
>UNIPROTKB|O17071 [details] [associations]
symbol:rpt-4 "Probable 26S protease regulatory subunit 10B"
species:6239 "Caenorhabditis elegans" [GO:0042802 "identical
protein binding" evidence=IPI] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 378 (138.1 bits), Expect = 4.1e-43, Sum P(2) = 4.1e-43
Identities = 80/197 (40%), Positives = 116/197 (58%)
Query: 101 EQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPMDKKKVLVKVHPEGKFXXX 160
EQ L+ L+ + +E+ + G VGEV+K + ++K +VK ++
Sbjct: 40 EQKLKDLRKKESEMTKQFDKSENDIKSLQSVGQIVGEVLKQLSEEKFIVKATNGPRYVVG 99
Query: 161 XXXXXXXXXXTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQI 220
RV+L + T+ + LP +VDPLV M E + +Y VGGL QI
Sbjct: 100 CRRSINKEELKQGTRVSLDMTTLTIMRQLPREVDPLVYKMSHEDPGNISYSDVGGLAEQI 159
Query: 221 KEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSE 280
+E++EV+ELP+ +PELF +GI PKG LL+GPPGTGKTLLARAVA +C F++V S
Sbjct: 160 RELREVVELPLINPELFKRVGITPPKGCLLFGPPGTGKTLLARAVASQLDCNFLKVVSSA 219
Query: 281 LVQKFIGEGSRMVRELF 297
+V K+IGE +RM+RE+F
Sbjct: 220 IVDKYIGESARMIREMF 236
Score = 136 (52.9 bits), Expect = 6.7e-12, Sum P(2) = 6.7e-12
Identities = 26/46 (56%), Positives = 35/46 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA +C F++V S +V K+IGE +RM+RE+F AR
Sbjct: 195 TGKTLLARAVASQLDCNFLKVVSSAIVDKYIGESARMIREMFNYAR 240
Score = 94 (38.1 bits), Expect = 4.1e-43, Sum P(2) = 4.1e-43
Identities = 18/47 (38%), Positives = 25/47 (53%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEA 376
R+H P I+FM +QRT++ELLNQLDGF++
Sbjct: 240 RDHQPCIVFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDS 286
>SGD|S000001628 [details] [associations]
symbol:RPT1 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IMP] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=IDA] [GO:0045732
"positive regulation of protein catabolic process" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IPI] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000001628 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 EMBL:BK006944 GO:GO:0006511 GO:GO:0017111
GO:GO:0045899 GO:GO:0045732 PDB:3VLF PDB:4A3V PDBsum:3VLF
PDBsum:4A3V GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03061
OMA:DIRWELI GeneTree:ENSGT00550000074978 OrthoDB:EOG4B01XN
EMBL:Z22817 EMBL:X73571 EMBL:Z28145 PIR:S34354 RefSeq:NP_012777.1
ProteinModelPortal:P33299 SMR:P33299 DIP:DIP-2883N IntAct:P33299
MINT:MINT-612502 STRING:P33299 SWISS-2DPAGE:P33299 PaxDb:P33299
PeptideAtlas:P33299 PRIDE:P33299 EnsemblFungi:YKL145W GeneID:853712
KEGG:sce:YKL145W CYGD:YKL145w NextBio:974719 Genevestigator:P33299
GermOnline:YKL145W Uniprot:P33299
Length = 467
Score = 400 (145.9 bits), Expect = 1.1e-42, Sum P(2) = 1.1e-42
Identities = 78/130 (60%), Positives = 98/130 (75%)
Query: 175 RVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHP 234
RV + Y + LP ++DP V++M VE+ PD TY VGG +QI++++EV+ELP+ P
Sbjct: 173 RVGVDRSKYNIELPLPPRIDPSVTMMTVEEKPDVTYSDVGGCKDQIEKLREVVELPLLSP 232
Query: 235 ELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVR 294
E F LGI PKG+LLYGPPGTGKTL ARAVA+ T+ TFIRV GSELVQK++GEG+RMVR
Sbjct: 233 ERFATLGIDPPKGILLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVR 292
Query: 295 ELFVMASLKK 304
ELF MA KK
Sbjct: 293 ELFEMARTKK 302
Score = 178 (67.7 bits), Expect = 6.1e-14, Sum P(2) = 6.1e-14
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 254 TGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTK 301
Score = 68 (29.0 bits), Expect = 1.1e-42, Sum P(2) = 1.1e-42
Identities = 13/16 (81%), Positives = 15/16 (93%)
Query: 360 VQRTMLELLNQLDGFE 375
VQRTMLEL+ QLDGF+
Sbjct: 329 VQRTMLELITQLDGFD 344
>DICTYBASE|DDB_G0276917 [details] [associations]
symbol:psmC2 "26S proteasome ATPase 2 subunit"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0000502
"proteasome complex" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0276917 GO:GO:0005524 GO:GO:0005634 GO:GO:0045335
GenomeReviews:CM000151_GR GO:GO:0016887 GO:GO:0000502 GO:GO:0006511
HSSP:Q9WZ49 EMBL:AAFI02000019 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03061 RefSeq:XP_642830.1 ProteinModelPortal:Q86JA1
STRING:Q86JA1 PRIDE:Q86JA1 EnsemblProtists:DDB0232966
GeneID:8620693 KEGG:ddi:DDB_G0276917 OMA:HIFTIHA
ProtClustDB:CLSZ2429177 Uniprot:Q86JA1
Length = 428
Score = 394 (143.8 bits), Expect = 1.1e-42, Sum P(2) = 1.1e-42
Identities = 82/168 (48%), Positives = 107/168 (63%)
Query: 137 EVVKPMDKKKVLVKVHPEGKFXXXXXXXXXXXXXTPNCRVALRNESYTLHKILPNKVDPL 196
+V KP K ++ V KF RV + Y + LP K+D
Sbjct: 98 DVGKP--NAKYIITVKQIAKFVVALGDKLSPTDVEEGIRVGVDRNKYQIQIPLPPKIDAS 155
Query: 197 VSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGT 256
V++M VE+ PD TY+ VGG QI++++EV+E+P+ HPE F LGI PKGVL+YGPPGT
Sbjct: 156 VTMMQVEEKPDITYKDVGGCKEQIEKLREVVEMPLLHPEKFVNLGIDPPKGVLMYGPPGT 215
Query: 257 GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKK 304
GKTL ARAVA+ T+ F+RV GSELVQK++GEG+RMVR+LF MA KK
Sbjct: 216 GKTLCARAVANRTDAAFVRVIGSELVQKYVGEGARMVRDLFQMARSKK 263
Score = 169 (64.5 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 33/48 (68%), Positives = 41/48 (85%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ F+RV GSELVQK++GEG+RMVR+LF MAR K
Sbjct: 215 TGKTLCARAVANRTDAAFVRVIGSELVQKYVGEGARMVRDLFQMARSK 262
Score = 74 (31.1 bits), Expect = 1.1e-42, Sum P(2) = 1.1e-42
Identities = 14/16 (87%), Positives = 16/16 (100%)
Query: 360 VQRTMLELLNQLDGFE 375
VQRTMLEL+NQLDGF+
Sbjct: 290 VQRTMLELINQLDGFD 305
>GENEDB_PFALCIPARUM|PF13_0063 [details] [associations]
symbol:PF13_0063 "26S proteasome regulatory
subunit 7, putative" species:5833 "Plasmodium falciparum"
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0004175 GO:GO:0006511
GO:GO:0017111 EMBL:AL844509 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0005838 KO:K03061 OMA:DIRWELI ProtClustDB:CLSZ2429177
RefSeq:XP_001349843.2 ProteinModelPortal:Q8IEK3 IntAct:Q8IEK3
MINT:MINT-1698409 PRIDE:Q8IEK3 EnsemblProtists:PF13_0063:mRNA
GeneID:814041 KEGG:pfa:PF13_0063 EuPathDB:PlasmoDB:PF3D7_1311500
Uniprot:Q8IEK3
Length = 420
Score = 395 (144.1 bits), Expect = 1.8e-42, Sum P(2) = 1.8e-42
Identities = 79/162 (48%), Positives = 104/162 (64%)
Query: 143 DKKKVLVKVHPEGKFXXXXXXXXXXXXXTPNCRVALRNESYTLHKILPNKVDPLVSLMMV 202
D+ K ++ V KF RV + Y + +LP K+DP V++M V
Sbjct: 94 DQTKYIINVKQIAKFVVGLGDKVAPSDIEEGMRVGVDRTKYKIQILLPPKIDPSVTMMTV 153
Query: 203 EKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 262
E+ PD TY +GG Q+++++EV+E+P+ PE F LGI PKGVLLYGPPGTGKTL A
Sbjct: 154 EEKPDITYNDIGGCKEQLEKLREVVEMPLLQPERFVTLGIDPPKGVLLYGPPGTGKTLTA 213
Query: 263 RAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKK 304
RA+A+ T+ FI V GSELVQK++GEG+RMVRELF MA KK
Sbjct: 214 RAIANRTDACFICVIGSELVQKYVGEGARMVRELFQMAKSKK 255
Score = 166 (63.5 bits), Expect = 5.3e-13, Sum P(2) = 5.3e-13
Identities = 39/70 (55%), Positives = 49/70 (70%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTL ARA+A+ T+ FI V GSELVQK++GEG+RMVRELF MA+ K + F +
Sbjct: 207 TGKTLTARAIANRTDACFICVIGSELVQKYVGEGARMVRELFQMAKSK---KACILFIDE 263
Query: 72 VDEAIKSSEG 81
VD AI S G
Sbjct: 264 VD-AIGGSRG 272
Score = 71 (30.1 bits), Expect = 1.8e-42, Sum P(2) = 1.8e-42
Identities = 13/16 (81%), Positives = 16/16 (100%)
Query: 360 VQRTMLELLNQLDGFE 375
VQRTMLE++NQLDGF+
Sbjct: 282 VQRTMLEIVNQLDGFD 297
>UNIPROTKB|Q8IEK3 [details] [associations]
symbol:PF13_0063 "26S proteasome regulatory subunit 7,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 GO:GO:0017111
EMBL:AL844509 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0005838
KO:K03061 OMA:DIRWELI ProtClustDB:CLSZ2429177 RefSeq:XP_001349843.2
ProteinModelPortal:Q8IEK3 IntAct:Q8IEK3 MINT:MINT-1698409
PRIDE:Q8IEK3 EnsemblProtists:PF13_0063:mRNA GeneID:814041
KEGG:pfa:PF13_0063 EuPathDB:PlasmoDB:PF3D7_1311500 Uniprot:Q8IEK3
Length = 420
Score = 395 (144.1 bits), Expect = 1.8e-42, Sum P(2) = 1.8e-42
Identities = 79/162 (48%), Positives = 104/162 (64%)
Query: 143 DKKKVLVKVHPEGKFXXXXXXXXXXXXXTPNCRVALRNESYTLHKILPNKVDPLVSLMMV 202
D+ K ++ V KF RV + Y + +LP K+DP V++M V
Sbjct: 94 DQTKYIINVKQIAKFVVGLGDKVAPSDIEEGMRVGVDRTKYKIQILLPPKIDPSVTMMTV 153
Query: 203 EKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 262
E+ PD TY +GG Q+++++EV+E+P+ PE F LGI PKGVLLYGPPGTGKTL A
Sbjct: 154 EEKPDITYNDIGGCKEQLEKLREVVEMPLLQPERFVTLGIDPPKGVLLYGPPGTGKTLTA 213
Query: 263 RAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKK 304
RA+A+ T+ FI V GSELVQK++GEG+RMVRELF MA KK
Sbjct: 214 RAIANRTDACFICVIGSELVQKYVGEGARMVRELFQMAKSKK 255
Score = 166 (63.5 bits), Expect = 5.3e-13, Sum P(2) = 5.3e-13
Identities = 39/70 (55%), Positives = 49/70 (70%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTL ARA+A+ T+ FI V GSELVQK++GEG+RMVRELF MA+ K + F +
Sbjct: 207 TGKTLTARAIANRTDACFICVIGSELVQKYVGEGARMVRELFQMAKSK---KACILFIDE 263
Query: 72 VDEAIKSSEG 81
VD AI S G
Sbjct: 264 VD-AIGGSRG 272
Score = 71 (30.1 bits), Expect = 1.8e-42, Sum P(2) = 1.8e-42
Identities = 13/16 (81%), Positives = 16/16 (100%)
Query: 360 VQRTMLELLNQLDGFE 375
VQRTMLE++NQLDGF+
Sbjct: 282 VQRTMLEIVNQLDGFD 297
>GENEDB_PFALCIPARUM|PF13_0033 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory
subunit, putative" species:5833 "Plasmodium falciparum" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853
GO:GO:0017111 EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 OMA:EHKEVES ProtClustDB:CLSZ2429012
GO:GO:0005838 RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1
PRIDE:Q8IEQ1 EnsemblProtists:PF13_0033:mRNA GeneID:814012
KEGG:pfa:PF13_0033 EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 373 (136.4 bits), Expect = 2.2e-42, Sum P(2) = 2.2e-42
Identities = 85/226 (37%), Positives = 129/226 (57%)
Query: 78 SSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGE 137
+ E K YV K+ E + E E +++L+ ELN K G +G+
Sbjct: 3 NKESIK-LYVKKVIEHR----EIESKVKKLRLDIKELNKKYEKTEDNLKALQSVGQIIGQ 57
Query: 138 VVKPMDKKKVLVKVHPEGKFXXXXXXXXXXXXXTPNCRVALRNESYTLHKILPNKVDPLV 197
V+K ++ +K +VK ++ RV+L + T+ K LP +VDPLV
Sbjct: 58 VLKQLEDEKFIVKASSGPRYVVGCKSKINKSKLVIGTRVSLDMTTLTVMKRLPCEVDPLV 117
Query: 198 SLMM--VEKVPDST----YEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLY 251
M+ ++K +ST Y +GGL QI++++EV+ELP+ +P L+ +GI PKGVLLY
Sbjct: 118 FNMISDIDKSENSTNKVNYNQIGGLSEQIRQMREVVELPILNPYLYKRVGIKTPKGVLLY 177
Query: 252 GPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 297
GPPGTGKTLLARA+A + C F+R+ S +V K+IGE +R++RE+F
Sbjct: 178 GPPGTGKTLLARAMASNINCNFMRIVVSAIVDKYIGESARIIREMF 223
Score = 123 (48.4 bits), Expect = 3.1e-10, Sum P(2) = 3.1e-10
Identities = 23/46 (50%), Positives = 35/46 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARA+A + C F+R+ S +V K+IGE +R++RE+F A+
Sbjct: 182 TGKTLLARAMASNINCNFMRIVVSAIVDKYIGESARIIREMFNYAK 227
Score = 92 (37.4 bits), Expect = 2.2e-42, Sum P(2) = 2.2e-42
Identities = 19/46 (41%), Positives = 23/46 (50%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFE 375
+EH P IIFM +QRT++ELLN LDGFE
Sbjct: 227 KEHQPCIIFMDEIDAIGGRRFSQGTSADREIQRTLMELLNHLDGFE 272
>UNIPROTKB|Q8IEQ1 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory subunit,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
OMA:EHKEVES ProtClustDB:CLSZ2429012 GO:GO:0005838
RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1 PRIDE:Q8IEQ1
EnsemblProtists:PF13_0033:mRNA GeneID:814012 KEGG:pfa:PF13_0033
EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 373 (136.4 bits), Expect = 2.2e-42, Sum P(2) = 2.2e-42
Identities = 85/226 (37%), Positives = 129/226 (57%)
Query: 78 SSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGE 137
+ E K YV K+ E + E E +++L+ ELN K G +G+
Sbjct: 3 NKESIK-LYVKKVIEHR----EIESKVKKLRLDIKELNKKYEKTEDNLKALQSVGQIIGQ 57
Query: 138 VVKPMDKKKVLVKVHPEGKFXXXXXXXXXXXXXTPNCRVALRNESYTLHKILPNKVDPLV 197
V+K ++ +K +VK ++ RV+L + T+ K LP +VDPLV
Sbjct: 58 VLKQLEDEKFIVKASSGPRYVVGCKSKINKSKLVIGTRVSLDMTTLTVMKRLPCEVDPLV 117
Query: 198 SLMM--VEKVPDST----YEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLY 251
M+ ++K +ST Y +GGL QI++++EV+ELP+ +P L+ +GI PKGVLLY
Sbjct: 118 FNMISDIDKSENSTNKVNYNQIGGLSEQIRQMREVVELPILNPYLYKRVGIKTPKGVLLY 177
Query: 252 GPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 297
GPPGTGKTLLARA+A + C F+R+ S +V K+IGE +R++RE+F
Sbjct: 178 GPPGTGKTLLARAMASNINCNFMRIVVSAIVDKYIGESARIIREMF 223
Score = 123 (48.4 bits), Expect = 3.1e-10, Sum P(2) = 3.1e-10
Identities = 23/46 (50%), Positives = 35/46 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARA+A + C F+R+ S +V K+IGE +R++RE+F A+
Sbjct: 182 TGKTLLARAMASNINCNFMRIVVSAIVDKYIGESARIIREMFNYAK 227
Score = 92 (37.4 bits), Expect = 2.2e-42, Sum P(2) = 2.2e-42
Identities = 19/46 (41%), Positives = 23/46 (50%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFE 375
+EH P IIFM +QRT++ELLN LDGFE
Sbjct: 227 KEHQPCIIFMDEIDAIGGRRFSQGTSADREIQRTLMELLNHLDGFE 272
>FB|FBgn0028685 [details] [associations]
symbol:Rpt4 "Regulatory particle triple-A ATPase 4"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
[GO:1901838 "positive regulation of transcription of nuclear large
rRNA transcript from RNA polymerase I promoter" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0001163 "RNA polymerase I
regulatory region sequence-specific DNA binding" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005875 GO:GO:0022008
GO:GO:0006508 GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 HSSP:Q01853
TIGRFAMs:TIGR01242 GO:GO:0008540 EMBL:AY071182
ProteinModelPortal:Q8SZ19 SMR:Q8SZ19 IntAct:Q8SZ19 STRING:Q8SZ19
PRIDE:Q8SZ19 FlyBase:FBgn0028685 InParanoid:Q8SZ19
OrthoDB:EOG43TX9X ChiTaRS:Rpt4 ArrayExpress:Q8SZ19 Bgee:Q8SZ19
Uniprot:Q8SZ19
Length = 397
Score = 372 (136.0 bits), Expect = 2.2e-42, Sum P(2) = 2.2e-42
Identities = 84/214 (39%), Positives = 121/214 (56%)
Query: 87 VTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRML---RXXXXXXXXXGSYVGEVVKPMD 143
V + E + + E ++ RL+ +R E+ ++ G VGEV+K +
Sbjct: 14 VKALSEYRKKLLEHKEIEGRLKEKREEIKDLTKLYDKSENDLKALQSVGQIVGEVLKQLT 73
Query: 144 KKKVLVKVHPEGKFXXXXXXXXXXXXXTPNCRVALRNESYTLHKILPNKVDPLVSLMMVE 203
+ K +VK ++ RVAL + T+ + LP +VDPLV M E
Sbjct: 74 EDKFIVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHE 133
Query: 204 KVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLAR 263
D TY +GGL +QI+E++EVIELP+ +PELF +GI PKG LLYGPPGTGKTLLAR
Sbjct: 134 DPGDVTYSAIGGLTDQIRELREVIELPLLNPELFLRVGITPPKGCLLYGPPGTGKTLLAR 193
Query: 264 AVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 297
AVA + F++V S +V K+IGE +R++RE+F
Sbjct: 194 AVASQLDANFLKVVSSAIVDKYIGESARLIREMF 227
Score = 124 (48.7 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 24/46 (52%), Positives = 34/46 (73%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA + F++V S +V K+IGE +R++RE+F AR
Sbjct: 186 TGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYAR 231
Score = 93 (37.8 bits), Expect = 2.2e-42, Sum P(2) = 2.2e-42
Identities = 18/47 (38%), Positives = 25/47 (53%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEA 376
R+H P IIFM +QRT++ELLNQ+DGF++
Sbjct: 231 RDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDS 277
>UNIPROTKB|Q9FXT8 [details] [associations]
symbol:OsRPT4 "Os02g0199900 protein" species:39947 "Oryza
sativa Japonica Group" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005886 GO:GO:0005524 GO:GO:0005737 GO:GO:0005618
GO:GO:0005730 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:AP008208
EMBL:CM000139 KO:K03064 EMBL:AP004869 TIGRFAMs:TIGR01242
OMA:EHKEVES GO:GO:0008540 ProtClustDB:CLSN2679874 EMBL:AP004812
EMBL:AB033536 RefSeq:NP_001046218.1 UniGene:Os.292 IntAct:Q9FXT8
STRING:Q9FXT8 EnsemblPlants:LOC_Os02g10640.1 GeneID:4328642
KEGG:osa:4328642 Uniprot:Q9FXT8
Length = 400
Score = 371 (135.7 bits), Expect = 2.2e-42, Sum P(2) = 2.2e-42
Identities = 71/166 (42%), Positives = 108/166 (65%)
Query: 132 GSYVGEVVKPMDKKKVLVKVHPEGKFXXXXXXXXXXXXXTPNCRVALRNESYTLHKILPN 191
G +GEV++P+D ++ +VK ++ T RV L + T+ + LP
Sbjct: 61 GQIIGEVLRPLDNERFIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRTLPR 120
Query: 192 KVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLY 251
+VDP+V M+ E + +Y VGGL +QI+E++E IELP+ +PELF +GI PKGVLLY
Sbjct: 121 EVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLY 180
Query: 252 GPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 297
GPPGTGKTLLARA+A + + F+++ S ++ K+IGE +R++RE+F
Sbjct: 181 GPPGTGKTLLARAIASNIDANFLKIVSSAIIDKYIGESARLIREMF 226
Score = 122 (48.0 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 21/46 (45%), Positives = 35/46 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARA+A + + F+++ S ++ K+IGE +R++RE+F AR
Sbjct: 185 TGKTLLARAIASNIDANFLKIVSSAIIDKYIGESARLIREMFGYAR 230
Score = 94 (38.1 bits), Expect = 2.2e-42, Sum P(2) = 2.2e-42
Identities = 19/46 (41%), Positives = 24/46 (52%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFE 375
R+H P IIFM +QRT++ELLNQLDGF+
Sbjct: 230 RDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFD 275
>POMBASE|SPBC16C6.07c [details] [associations]
symbol:rpt1 "19S proteasome regulatory subunit Rpt1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC16C6.07c GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0007346 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 KO:K03061
OMA:DIRWELI PIR:T39558 RefSeq:NP_596805.1 ProteinModelPortal:O42931
IntAct:O42931 STRING:O42931 PRIDE:O42931
EnsemblFungi:SPBC16C6.07c.1 GeneID:2539862 KEGG:spo:SPBC16C6.07c
OrthoDB:EOG4B01XN NextBio:20801008 Uniprot:O42931
Length = 438
Score = 396 (144.5 bits), Expect = 2.8e-42, Sum P(2) = 2.8e-42
Identities = 81/162 (50%), Positives = 102/162 (62%)
Query: 143 DKKKVLVKVHPEGKFXXXXXXXXXXXXXTPNCRVALRNESYTLHKILPNKVDPLVSLMMV 202
+K ++ + KF RV Y + LP K+DP V++M V
Sbjct: 111 EKNAYVINLKQIAKFVVSLGERVSPTDIEEGMRVGCDRNKYAIQLPLPPKIDPSVTMMQV 170
Query: 203 EKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 262
E+ PD TY VGG QI+ ++EV+ELP+ PE F LGI PKG++LYGPPGTGKTL A
Sbjct: 171 EEKPDVTYGDVGGCKEQIERLREVVELPLLSPERFVKLGIDPPKGIMLYGPPGTGKTLCA 230
Query: 263 RAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKK 304
RAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 231 RAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKK 272
Score = 178 (67.7 bits), Expect = 4.6e-14, Sum P(2) = 4.6e-14
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 224 TGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTK 271
Score = 68 (29.0 bits), Expect = 2.8e-42, Sum P(2) = 2.8e-42
Identities = 13/16 (81%), Positives = 15/16 (93%)
Query: 360 VQRTMLELLNQLDGFE 375
VQRTMLEL+ QLDGF+
Sbjct: 299 VQRTMLELITQLDGFD 314
>DICTYBASE|DDB_G0284517 [details] [associations]
symbol:psmC6 "26S protease regulatory subunit S10B"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0284517
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GenomeReviews:CM000153_GR
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 GO:GO:0017111
EMBL:AAFI02000066 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
RefSeq:XP_638541.1 ProteinModelPortal:Q54PJ1 STRING:Q54PJ1
EnsemblProtists:DDB0232968 GeneID:8624634 KEGG:ddi:DDB_G0284517
OMA:HAANITK ProtClustDB:CLSZ2429012 Uniprot:Q54PJ1
Length = 393
Score = 371 (135.7 bits), Expect = 4.6e-42, Sum P(2) = 4.6e-42
Identities = 74/167 (44%), Positives = 107/167 (64%)
Query: 132 GSYVGEVVKPMDKKKVLVKVHPEGKFXXX-XXXXXXXXXXTPNCRVALRNESYTLHKILP 190
G +GEV++ +D+++ +VK ++ P RV L + T+ KILP
Sbjct: 57 GEIIGEVLRSLDEERFIVKACNGPRYVVRCANYQDKAHLLVPGARVTLDLTTLTILKILP 116
Query: 191 NKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLL 250
+VDP++ M E +Y +GGL NQI+E++EV+ELP+ PELF +GI PKGVLL
Sbjct: 117 REVDPIIFNMTAESPGSVSYGEIGGLSNQIRELREVVELPLMIPELFIRVGIKAPKGVLL 176
Query: 251 YGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 297
YGPPGTGKTLLARA+A + E F++V S +V K+IGE +R++RE+F
Sbjct: 177 YGPPGTGKTLLARAIASNLEANFLKVVSSAIVDKYIGESARVIREMF 223
Score = 126 (49.4 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 24/46 (52%), Positives = 35/46 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARA+A + E F++V S +V K+IGE +R++RE+F AR
Sbjct: 182 TGKTLLARAIASNLEANFLKVVSSAIVDKYIGESARVIREMFGYAR 227
Score = 91 (37.1 bits), Expect = 4.6e-42, Sum P(2) = 4.6e-42
Identities = 17/46 (36%), Positives = 24/46 (52%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFE 375
R+H P +IFM +QRT++ELLNQ+DGF+
Sbjct: 227 RDHQPCVIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFD 272
>FB|FBgn0036224 [details] [associations]
symbol:Rpt4R "Regulatory particle triple-A ATPase 4-related"
species:7227 "Drosophila melanogaster" [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014296
GO:GO:0006200 GO:GO:0006974 GO:GO:0016887 GO:GO:0030163 HSSP:Q01853
KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074826 EMBL:AY089267 RefSeq:NP_648525.1
UniGene:Dm.5141 SMR:Q9VTQ9 IntAct:Q9VTQ9 MINT:MINT-869141
STRING:Q9VTQ9 EnsemblMetazoa:FBtr0076040 GeneID:39351
KEGG:dme:Dmel_CG7257 UCSC:CG7257-RA CTD:39351 FlyBase:FBgn0036224
InParanoid:Q9VTQ9 OMA:CAIWTEA OrthoDB:EOG4VT4CM GenomeRNAi:39351
NextBio:813228 Uniprot:Q9VTQ9
Length = 398
Score = 366 (133.9 bits), Expect = 4.6e-42, Sum P(2) = 4.6e-42
Identities = 82/215 (38%), Positives = 120/215 (55%)
Query: 86 YVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPMDKK 145
Y TK+ E + E E L+ L+ + +NA+ G VGE++K +
Sbjct: 21 YRTKLLEHR----EIESKLKALRDKYKVVNAEYEKSEDDLKALQSVGQMVGEILKQLTPD 76
Query: 146 KVLVKVHPEGKFXXXXXXXXXXXXXTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 205
+VK ++ P RVAL + T+ + LP +VDPLV M E
Sbjct: 77 NFIVKASNGPRYVVGCRRQINKEKLKPGTRVALDVTTLTIMRYLPREVDPLVYNMTHEDP 136
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
+ Y +GGL QI+E++EVIELP+ +P++F +GI+ PKG LLYGPPGTGKTLLARA+
Sbjct: 137 GNVNYAEIGGLGQQIRELREVIELPLLNPDIFLRVGISPPKGCLLYGPPGTGKTLLARAI 196
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
A + F++V S +V K+IGE +R++RE+F A
Sbjct: 197 ASQMDANFLKVVSSAIVDKYIGESARLIREMFAYA 231
Score = 126 (49.4 bits), Expect = 5.7e-11, Sum P(2) = 5.7e-11
Identities = 23/46 (50%), Positives = 34/46 (73%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARA+A + F++V S +V K+IGE +R++RE+F AR
Sbjct: 187 TGKTLLARAIASQMDANFLKVVSSAIVDKYIGESARLIREMFAYAR 232
Score = 96 (38.9 bits), Expect = 4.6e-42, Sum P(2) = 4.6e-42
Identities = 19/47 (40%), Positives = 25/47 (53%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEA 376
R+H P IIFM +QRT++ELLNQ+DGF+A
Sbjct: 232 RDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDA 278
>ASPGD|ASPL0000034636 [details] [associations]
symbol:AN2917 species:162425 "Emericella nidulans"
[GO:0070682 "proteasome regulatory particle assembly" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0045899 "positive regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:BN001306
EMBL:AACD01000051 GO:GO:0030163 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI
OrthoDB:EOG4B01XN RefSeq:XP_660521.1 ProteinModelPortal:Q5B963
STRING:Q5B963 EnsemblFungi:CADANIAT00010170 GeneID:2874156
KEGG:ani:AN2917.2 Uniprot:Q5B963
Length = 443
Score = 388 (141.6 bits), Expect = 7.5e-42, Sum P(2) = 7.5e-42
Identities = 84/169 (49%), Positives = 106/169 (62%)
Query: 140 KPMDKKKVLVKVHPEGKFXXXXXXXXXXXXXTPNC----RVALRNESYTLHKILPNKVDP 195
K DK K ++ V KF + R+++ Y + LP K+DP
Sbjct: 110 KDSDKSKYVINVKQIAKFVVNLGERVSPTDIEEDLSHTDRLSVDRNKYQIMLPLPPKIDP 169
Query: 196 LVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPG 255
V++M VE PD TY VGG QI++++EV+E+P+ PE F LGI PKG LLYGPPG
Sbjct: 170 SVTMMTVEDKPDVTYGDVGGCKEQIEKLREVVEMPLLSPERFVNLGIDPPKGALLYGPPG 229
Query: 256 TGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKK 304
TGKTL ARAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MA KK
Sbjct: 230 TGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKK 278
Score = 178 (67.7 bits), Expect = 1.9e-14, Sum P(2) = 1.9e-14
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL ARAVA+ T+ TFIRV GSELVQK++GEG+RMVRELF MAR K
Sbjct: 230 TGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTK 277
Score = 72 (30.4 bits), Expect = 7.5e-42, Sum P(2) = 7.5e-42
Identities = 14/17 (82%), Positives = 16/17 (94%)
Query: 360 VQRTMLELLNQLDGFEA 376
VQRTMLEL+ QLDGF+A
Sbjct: 305 VQRTMLELITQLDGFDA 321
>FB|FBgn0037742 [details] [associations]
symbol:Rpt3R "Regulatory particle triple-A ATPase 3-related"
species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
evidence=ISS] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=NAS]
[GO:0006974 "response to DNA damage stimulus" evidence=IMP]
InterPro:IPR001270 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PRINTS:PR00300
PROSITE:PS00674 SMART:SM00382 EMBL:AE014297 GO:GO:0005524
GO:GO:0005737 GO:GO:0006200 GO:GO:0006974 GO:GO:0016887
GO:GO:0030163 TIGRFAMs:TIGR01242 KO:K03063
GeneTree:ENSGT00550000074962 FlyBase:FBgn0037742 EMBL:BT016035
RefSeq:NP_649938.2 UniGene:Dm.21651 SMR:Q9VH79 STRING:Q9VH79
EnsemblMetazoa:FBtr0301536 EnsemblMetazoa:FBtr0332172 GeneID:41190
KEGG:dme:Dmel_CG9475 UCSC:CG9475-RA CTD:41190 InParanoid:Q9VH79
OMA:KQSNCLV OrthoDB:EOG49GHZ0 GenomeRNAi:41190 NextBio:822637
Uniprot:Q9VH79
Length = 405
Score = 369 (135.0 bits), Expect = 2.0e-41, Sum P(2) = 2.0e-41
Identities = 83/233 (35%), Positives = 135/233 (57%)
Query: 73 DEAIKSSEGFKPY--YVT--KIE-ELQLIVAEKEQNLRRLQAQRNELNAKVRMLRXXXXX 127
+++++ +G P+ YV K++ EL+LI + E ++ + QRN L + +
Sbjct: 13 EQSLEKYDGLDPHDLYVLYKKLQMELELIQVQ-EDYIK--EEQRN-LKKEFIHAQEEVKR 68
Query: 128 XXXXGSYVGEVVKPMDKKKVLVKVHPEGKFXXXXXXXXXXXXXTPNCRVALRNESYTLHK 187
+G+ ++ +D+ +V + P+ V L +S L
Sbjct: 69 IKAVPLVIGQFLEAVDENNGIVASTTGSNYYVRVLSTIDREQLKPSSSVGLHKQSNCLVD 128
Query: 188 ILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKG 247
++P + D +S++ ++ PD +Y +GGLD Q +EI+E +ELP+ H +L+ +GI P+G
Sbjct: 129 LVPPEADSTISMLSPDEKPDISYSDIGGLDIQKQEIREAVELPLTHAQLYKQIGIDPPRG 188
Query: 248 VLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
VLL+GPPG GKT+LA+AVAHHT +FIRV GSE VQK++GEG RMVR+LF +A
Sbjct: 189 VLLFGPPGCGKTMLAKAVAHHTTASFIRVVGSEFVQKYLGEGPRMVRDLFRLA 241
Score = 164 (62.8 bits), Expect = 1.7e-14, Sum P(2) = 1.7e-14
Identities = 31/45 (68%), Positives = 39/45 (86%)
Query: 13 GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
GKT+LA+AVAHHT +FIRV GSE VQK++GEG RMVR+LF +A+
Sbjct: 198 GKTMLAKAVAHHTTASFIRVVGSEFVQKYLGEGPRMVRDLFRLAK 242
Score = 87 (35.7 bits), Expect = 2.0e-41, Sum P(2) = 2.0e-41
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEAT 377
++++PSIIF+ VQR +LELLNQ+DGF+ T
Sbjct: 242 KQNSPSIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDET 289
>FB|FBgn0028686 [details] [associations]
symbol:Rpt3 "Regulatory particle triple-A ATPase 3"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0004175
"endopeptidase activity" evidence=IDA] [GO:0006508 "proteolysis"
evidence=ISS;IDA] [GO:0005838 "proteasome regulatory particle"
evidence=ISS;IDA] [GO:0001673 "male germ cell nucleus"
evidence=IDA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PRINTS:PR00300 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:AE014298 GO:GO:0006508
GO:GO:0006974 GO:GO:0016887 GO:GO:0004175 GO:GO:0001673
GO:GO:0030163 HSSP:Q01853 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0008540 BRENDA:3.4.25.1 KO:K03063 OMA:DQTTNVK
GeneTree:ENSGT00550000074962 EMBL:AF145306 EMBL:BT046144
EMBL:FN544098 EMBL:FN544099 EMBL:FN544100 EMBL:FN544101
EMBL:FN544102 EMBL:FN544103 EMBL:FN544104 EMBL:FN544105
EMBL:FN544106 EMBL:FN544108 RefSeq:NP_572686.1 UniGene:Dm.8238
SMR:Q9V405 STRING:Q9V405 EnsemblMetazoa:FBtr0073436 GeneID:32047
KEGG:dme:Dmel_CG16916 UCSC:CG16916-RA CTD:32047 FlyBase:FBgn0028686
InParanoid:Q9V405 OrthoDB:EOG4P5HRH GenomeRNAi:32047 NextBio:776548
Uniprot:Q9V405
Length = 413
Score = 363 (132.8 bits), Expect = 4.1e-41, Sum P(2) = 4.1e-41
Identities = 70/166 (42%), Positives = 105/166 (63%)
Query: 135 VGEVVKPMDKKKVLVKVHPEGKFXXXXXXXXXXXXXTPNCRVALRNESYTLHKILPNKVD 194
+G+ ++ +D+ +V + P+ VAL S L +LP + D
Sbjct: 84 IGQFLEAVDQNTGIVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLPPEAD 143
Query: 195 PLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPP 254
+S++ ++ PD +Y +GG+D Q +EI+E +ELP+ H EL+ +GI P+GVL+YGPP
Sbjct: 144 SSISMLQPDEKPDVSYADIGGMDMQKQEIREAVELPLTHFELYKQIGIDPPRGVLMYGPP 203
Query: 255 GTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
G GKT+LA+AVAHHT +FIRV GSE VQK++GEG RMVR++F +A
Sbjct: 204 GCGKTMLAKAVAHHTTASFIRVVGSEFVQKYLGEGPRMVRDVFRLA 249
Score = 161 (61.7 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
Identities = 30/45 (66%), Positives = 39/45 (86%)
Query: 13 GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
GKT+LA+AVAHHT +FIRV GSE VQK++GEG RMVR++F +A+
Sbjct: 206 GKTMLAKAVAHHTTASFIRVVGSEFVQKYLGEGPRMVRDVFRLAK 250
Score = 90 (36.7 bits), Expect = 4.1e-41, Sum P(2) = 4.1e-41
Identities = 19/48 (39%), Positives = 26/48 (54%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEAT 377
+E+AP+IIF+ VQR +LELLNQ+DGF+ T
Sbjct: 250 KENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQT 297
>ZFIN|ZDB-GENE-030131-5083 [details] [associations]
symbol:psmc4 "proteasome (prosome, macropain) 26S
subunit, ATPase, 4" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005937
Pfam:PF00004 SMART:SM00382 ZFIN:ZDB-GENE-030131-5083 GO:GO:0005524
GO:GO:0005737 GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 EMBL:BC055215 IPI:IPI00509630
UniGene:Dr.76514 ProteinModelPortal:Q7SXX0 SMR:Q7SXX0 STRING:Q7SXX0
PRIDE:Q7SXX0 InParanoid:Q7SXX0 ArrayExpress:Q7SXX0 Bgee:Q7SXX0
Uniprot:Q7SXX0
Length = 418
Score = 364 (133.2 bits), Expect = 8.4e-41, Sum P(2) = 8.4e-41
Identities = 79/218 (36%), Positives = 118/218 (54%)
Query: 90 IEELQLIVAEKEQNLRRLQAQRNEL-----NAKVRMLRXXXXXXXXXGS--YVGEVVKPM 142
+E+L I + +Q L L+ Q + N K L +G+ ++ +
Sbjct: 37 LEDLYSIYKKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAV 96
Query: 143 DKKKVLVKVHPEGKFXXXXXXXXXXXXXTPNCRVALRNESYTLHKILPNKVDPLVSLMMV 202
D+ +V + PN VAL S L +LP + D + ++
Sbjct: 97 DQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTS 156
Query: 203 EKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 262
++ PD Y +GG+D Q +E++E +ELP+ H EL+ +GI P+GVL+YGPPG GKT+LA
Sbjct: 157 DQKPDVLYSDIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLA 216
Query: 263 RAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
+AVAHHT FIRV GSE VQK++GEG RMVR++F +A
Sbjct: 217 KAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLA 254
Score = 160 (61.4 bits), Expect = 7.7e-14, Sum P(2) = 7.7e-14
Identities = 30/45 (66%), Positives = 38/45 (84%)
Query: 13 GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
GKT+LA+AVAHHT FIRV GSE VQK++GEG RMVR++F +A+
Sbjct: 211 GKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAK 255
Score = 86 (35.3 bits), Expect = 8.4e-41, Sum P(2) = 8.4e-41
Identities = 18/46 (39%), Positives = 25/46 (54%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFE 375
+E+AP+IIF+ VQR +LELLNQ+DGF+
Sbjct: 255 KENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFD 300
>TAIR|locus:2161258 [details] [associations]
symbol:RPT3 "regulatory particle triple-A ATPase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IGI;ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=RCA;TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0005618 "cell wall" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0006888
"ER to Golgi vesicle-mediated transport" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009735 "response to cytokinin
stimulus" evidence=RCA] [GO:0009853 "photorespiration"
evidence=RCA] [GO:0010498 "proteasomal protein catabolic process"
evidence=RCA] [GO:0043090 "amino acid import" evidence=RCA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0048767 "root hair elongation" evidence=RCA]
[GO:0051788 "response to misfolded protein" evidence=RCA]
[GO:0080129 "proteasome core complex assembly" evidence=RCA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0009506 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
GO:GO:0016020 EMBL:AB019228 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:AF123392 EMBL:AY070466 EMBL:BT020373
IPI:IPI00537564 RefSeq:NP_200637.1 UniGene:At.45955
ProteinModelPortal:Q9SEI4 SMR:Q9SEI4 IntAct:Q9SEI4 STRING:Q9SEI4
PaxDb:Q9SEI4 PRIDE:Q9SEI4 EnsemblPlants:AT5G58290.1 GeneID:835941
KEGG:ath:AT5G58290 GeneFarm:1500 TAIR:At5g58290 InParanoid:Q9SEI4
KO:K03063 OMA:DQTTNVK ProtClustDB:CLSN2686094 Genevestigator:Q9SEI4
GermOnline:AT5G58290 Uniprot:Q9SEI4
Length = 408
Score = 361 (132.1 bits), Expect = 8.4e-41, Sum P(2) = 8.4e-41
Identities = 72/166 (43%), Positives = 103/166 (62%)
Query: 135 VGEVVKPMDKKKVLVKVHPEGKFXXXXXXXXXXXXXTPNCRVALRNESYTLHKILPNKVD 194
+G+ ++ +D+ +V + P+ VAL S L +LP + D
Sbjct: 79 IGQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEAD 138
Query: 195 PLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPP 254
+SL+ + PD +Y +GG D Q +EI+E +ELP+ H EL+ +GI P+GVLLYGPP
Sbjct: 139 SSISLLSQSEKPDVSYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPP 198
Query: 255 GTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
GTGKT+LA+AVA+HT FIRV GSE VQK++GEG RMVR++F +A
Sbjct: 199 GTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLA 244
Score = 154 (59.3 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 29/46 (63%), Positives = 39/46 (84%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKT+LA+AVA+HT FIRV GSE VQK++GEG RMVR++F +A+
Sbjct: 200 TGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAK 245
Score = 89 (36.4 bits), Expect = 8.4e-41, Sum P(2) = 8.4e-41
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEAT 377
+E+AP+IIF+ VQR ++ELLNQ+DGF+ T
Sbjct: 245 KENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQT 292
>ASPGD|ASPL0000036562 [details] [associations]
symbol:AN2904 species:162425 "Emericella nidulans"
[GO:0070682 "proteasome regulatory particle assembly" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001306 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 TIGRFAMs:TIGR01242 EnsemblFungi:CADANIAT00010185
OMA:EDAYSAQ Uniprot:C8VJ79
Length = 422
Score = 357 (130.7 bits), Expect = 8.4e-41, Sum P(2) = 8.4e-41
Identities = 72/166 (43%), Positives = 105/166 (63%)
Query: 135 VGEVVKPMDKKKVLVKVHPEGKFXXXXXXXXXXXXXTPNCRVALRNESYTLHKILPNKVD 194
+G+ ++ +D+ +V+ + P+ VAL S L ILP + D
Sbjct: 90 IGQFMEAIDQNTGIVQSSTGSNYVVRILSTLDREKLKPSSSVALHRHSNALVDILPPEAD 149
Query: 195 PLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPP 254
++++ + PD TY VGGLD Q +EI+E +ELP+ H +L+ +GI P+GVLLYGPP
Sbjct: 150 SSIAMLGENEKPDVTYADVGGLDMQKQEIREAVELPLTHFDLYKQIGIDPPRGVLLYGPP 209
Query: 255 GTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
GTGKT+L +AVA+ T +FIRV+GSE VQK++GEG RMVR++F MA
Sbjct: 210 GTGKTMLVKAVANSTTASFIRVNGSEFVQKYLGEGPRMVRDVFRMA 255
Score = 151 (58.2 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 29/46 (63%), Positives = 39/46 (84%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKT+L +AVA+ T +FIRV+GSE VQK++GEG RMVR++F MAR
Sbjct: 211 TGKTMLVKAVANSTTASFIRVNGSEFVQKYLGEGPRMVRDVFRMAR 256
Score = 93 (37.8 bits), Expect = 8.4e-41, Sum P(2) = 8.4e-41
Identities = 20/48 (41%), Positives = 26/48 (54%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEAT 377
RE++P+IIF+ VQR +LELLNQ+DGFE T
Sbjct: 256 RENSPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFEQT 303
>CGD|CAL0005827 [details] [associations]
symbol:RPT4 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=IEA]
[GO:0006289 "nucleotide-excision repair" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0005827 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 RefSeq:XP_717345.1
RefSeq:XP_717434.1 ProteinModelPortal:Q5A6S2 STRING:Q5A6S2
GeneID:3640859 GeneID:3640966 KEGG:cal:CaO19.482
KEGG:cal:CaO19.8112 Uniprot:Q5A6S2
Length = 428
Score = 357 (130.7 bits), Expect = 1.1e-40, Sum P(2) = 1.1e-40
Identities = 79/214 (36%), Positives = 120/214 (56%)
Query: 87 VTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPMDKKK 146
++K ++ L + + L+ L+ +L+ G +GEV+K +D ++
Sbjct: 48 LSKFKDKLLEHRKWDARLKDLRLSIRDLDKDYEKTENDIKALQSVGQIIGEVLKQLDDER 107
Query: 147 VLVKVHPEGKFXXXXXXXXXXXXXTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVP 206
+VK ++ RV+L + T+ +ILP +VDPLV M +
Sbjct: 108 YIVKTSSGPRYIVGCRNTIKKENLKNGVRVSLDMTTLTIMRILPREVDPLVYNMTTFEPG 167
Query: 207 DSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVA 266
+ ++ +GGL QI+E++EVIELP+K+PELF +GI PKGVLLYGPPGTGKTLLA+AVA
Sbjct: 168 EISFNGIGGLTEQIRELREVIELPLKNPELFTRVGIKPPKGVLLYGPPGTGKTLLAKAVA 227
Query: 267 HHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
FI S +V K+IGE +R++RE+F A
Sbjct: 228 ATIGANFIFSPASAIVDKYIGESARLIREMFAYA 261
Score = 106 (42.4 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 22/46 (47%), Positives = 31/46 (67%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLA+AVA FI S +V K+IGE +R++RE+F A+
Sbjct: 217 TGKTLLAKAVAATIGANFIFSPASAIVDKYIGESARLIREMFAYAK 262
Score = 92 (37.4 bits), Expect = 1.1e-40, Sum P(2) = 1.1e-40
Identities = 18/46 (39%), Positives = 24/46 (52%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFE 375
+EH P IIFM +QRT++ELLNQ+DGF+
Sbjct: 262 KEHEPCIIFMDEVDAIGGRRFSEGTSADREIQRTLMELLNQMDGFD 307
>UNIPROTKB|F1MG70 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 TIGRFAMs:TIGR01242 OMA:DQTTNVK
IPI:IPI00718026 GeneTree:ENSGT00550000074962 EMBL:DAAA02047067
Ensembl:ENSBTAT00000012391 ArrayExpress:F1MG70 Uniprot:F1MG70
Length = 417
Score = 360 (131.8 bits), Expect = 2.2e-40, Sum P(2) = 2.2e-40
Identities = 69/166 (41%), Positives = 102/166 (61%)
Query: 135 VGEVVKPMDKKKVLVKVHPEGKFXXXXXXXXXXXXXTPNCRVALRNESYTLHKILPNKVD 194
+G+ ++ +D+ +V + PN VAL S L +LP + D
Sbjct: 88 IGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEAD 147
Query: 195 PLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPP 254
+ ++ ++ PD Y +GG+D Q +E++E +ELP+ H EL+ +GI P+GVL+YGPP
Sbjct: 148 SSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPP 207
Query: 255 GTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
G GKT+LA+AVAHHT FIRV GSE VQK++GEG RMVR++F +A
Sbjct: 208 GCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLA 253
Score = 160 (61.4 bits), Expect = 7.6e-14, Sum P(2) = 7.6e-14
Identities = 30/45 (66%), Positives = 38/45 (84%)
Query: 13 GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
GKT+LA+AVAHHT FIRV GSE VQK++GEG RMVR++F +A+
Sbjct: 210 GKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAK 254
Score = 86 (35.3 bits), Expect = 2.2e-40, Sum P(2) = 2.2e-40
Identities = 18/46 (39%), Positives = 25/46 (54%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFE 375
+E+AP+IIF+ VQR +LELLNQ+DGF+
Sbjct: 254 KENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFD 299
>UNIPROTKB|Q3T030 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 HSSP:Q9WZ49 GO:GO:0001824 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03063 EMBL:BC102595 IPI:IPI00718026
RefSeq:NP_001030255.1 UniGene:Bt.48909 ProteinModelPortal:Q3T030
SMR:Q3T030 STRING:Q3T030 PRIDE:Q3T030 GeneID:510029 KEGG:bta:510029
CTD:5704 InParanoid:Q3T030 OrthoDB:EOG4KD6M4 NextBio:20869245
ArrayExpress:Q3T030 Uniprot:Q3T030
Length = 418
Score = 360 (131.8 bits), Expect = 2.2e-40, Sum P(2) = 2.2e-40
Identities = 69/166 (41%), Positives = 102/166 (61%)
Query: 135 VGEVVKPMDKKKVLVKVHPEGKFXXXXXXXXXXXXXTPNCRVALRNESYTLHKILPNKVD 194
+G+ ++ +D+ +V + PN VAL S L +LP + D
Sbjct: 89 IGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEAD 148
Query: 195 PLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPP 254
+ ++ ++ PD Y +GG+D Q +E++E +ELP+ H EL+ +GI P+GVL+YGPP
Sbjct: 149 SSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPP 208
Query: 255 GTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
G GKT+LA+AVAHHT FIRV GSE VQK++GEG RMVR++F +A
Sbjct: 209 GCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLA 254
Score = 160 (61.4 bits), Expect = 7.7e-14, Sum P(2) = 7.7e-14
Identities = 30/45 (66%), Positives = 38/45 (84%)
Query: 13 GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
GKT+LA+AVAHHT FIRV GSE VQK++GEG RMVR++F +A+
Sbjct: 211 GKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAK 255
Score = 86 (35.3 bits), Expect = 2.2e-40, Sum P(2) = 2.2e-40
Identities = 18/46 (39%), Positives = 25/46 (54%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFE 375
+E+AP+IIF+ VQR +LELLNQ+DGF+
Sbjct: 255 KENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFD 300
>UNIPROTKB|E2RH48 [details] [associations]
symbol:PSMC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0001824 "blastocyst development"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 TIGRFAMs:TIGR01242 KO:K03063
OMA:DQTTNVK GeneTree:ENSGT00550000074962 EMBL:AAEX03000950
RefSeq:XP_003638879.1 ProteinModelPortal:E2RH48 SMR:E2RH48
PRIDE:E2RH48 Ensembl:ENSCAFT00000008685 GeneID:100855613
KEGG:cfa:100855613 NextBio:20852115 Uniprot:E2RH48
Length = 418
Score = 360 (131.8 bits), Expect = 2.2e-40, Sum P(2) = 2.2e-40
Identities = 69/166 (41%), Positives = 102/166 (61%)
Query: 135 VGEVVKPMDKKKVLVKVHPEGKFXXXXXXXXXXXXXTPNCRVALRNESYTLHKILPNKVD 194
+G+ ++ +D+ +V + PN VAL S L +LP + D
Sbjct: 89 IGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEAD 148
Query: 195 PLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPP 254
+ ++ ++ PD Y +GG+D Q +E++E +ELP+ H EL+ +GI P+GVL+YGPP
Sbjct: 149 SSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPP 208
Query: 255 GTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
G GKT+LA+AVAHHT FIRV GSE VQK++GEG RMVR++F +A
Sbjct: 209 GCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLA 254
Score = 160 (61.4 bits), Expect = 7.7e-14, Sum P(2) = 7.7e-14
Identities = 30/45 (66%), Positives = 38/45 (84%)
Query: 13 GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
GKT+LA+AVAHHT FIRV GSE VQK++GEG RMVR++F +A+
Sbjct: 211 GKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAK 255
Score = 86 (35.3 bits), Expect = 2.2e-40, Sum P(2) = 2.2e-40
Identities = 18/46 (39%), Positives = 25/46 (54%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFE 375
+E+AP+IIF+ VQR +LELLNQ+DGF+
Sbjct: 255 KENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFD 300
>UNIPROTKB|P43686 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0001824 "blastocyst development" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0006508 "proteolysis" evidence=TAS] [GO:0016887
"ATPase activity" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0006521 "regulation of cellular amino acid metabolic process"
evidence=TAS] [GO:0006915 "apoptotic process" evidence=TAS]
[GO:0006977 "DNA damage response, signal transduction by p53 class
mediator resulting in cell cycle arrest" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0006200 "ATP catabolic process" evidence=TAS]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
GO:GO:0042981 GO:GO:0000082 GO:GO:0016887 GO:GO:0051436
GO:GO:0000216 GO:GO:0000209 GO:GO:0000084 GO:GO:0031145
GO:GO:0051437 GO:GO:0006521 GO:GO:0001824 Reactome:REACT_383
EMBL:AC007842 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK CTD:5704
OrthoDB:EOG4KD6M4 EMBL:AF038965 EMBL:U27515 EMBL:AF020736
EMBL:BT007232 EMBL:BC000343 EMBL:BC010396 EMBL:BC014488
IPI:IPI00020042 IPI:IPI00216770 RefSeq:NP_006494.1
RefSeq:NP_694546.1 UniGene:Hs.211594 PDB:2DVW PDBsum:2DVW
ProteinModelPortal:P43686 SMR:P43686 DIP:DIP-29274N IntAct:P43686
MINT:MINT-5004247 STRING:P43686 PhosphoSite:P43686 DMDM:20532409
OGP:P43686 PaxDb:P43686 PRIDE:P43686 DNASU:5704
Ensembl:ENST00000157812 Ensembl:ENST00000455878 GeneID:5704
KEGG:hsa:5704 UCSC:uc002omq.3 UCSC:uc002omr.3 GeneCards:GC19P040477
HGNC:HGNC:9551 HPA:HPA002044 HPA:HPA005471 MIM:602707
neXtProt:NX_P43686 PharmGKB:PA33896 InParanoid:P43686
PhylomeDB:P43686 ChiTaRS:PSMC4 EvolutionaryTrace:P43686
GenomeRNAi:5704 NextBio:22160 ArrayExpress:P43686 Bgee:P43686
CleanEx:HS_PSMC4 Genevestigator:P43686 GermOnline:ENSG00000013275
Uniprot:P43686
Length = 418
Score = 360 (131.8 bits), Expect = 2.2e-40, Sum P(2) = 2.2e-40
Identities = 69/166 (41%), Positives = 102/166 (61%)
Query: 135 VGEVVKPMDKKKVLVKVHPEGKFXXXXXXXXXXXXXTPNCRVALRNESYTLHKILPNKVD 194
+G+ ++ +D+ +V + PN VAL S L +LP + D
Sbjct: 89 IGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEAD 148
Query: 195 PLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPP 254
+ ++ ++ PD Y +GG+D Q +E++E +ELP+ H EL+ +GI P+GVL+YGPP
Sbjct: 149 SSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPP 208
Query: 255 GTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
G GKT+LA+AVAHHT FIRV GSE VQK++GEG RMVR++F +A
Sbjct: 209 GCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLA 254
Score = 160 (61.4 bits), Expect = 7.7e-14, Sum P(2) = 7.7e-14
Identities = 30/45 (66%), Positives = 38/45 (84%)
Query: 13 GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
GKT+LA+AVAHHT FIRV GSE VQK++GEG RMVR++F +A+
Sbjct: 211 GKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAK 255
Score = 86 (35.3 bits), Expect = 2.2e-40, Sum P(2) = 2.2e-40
Identities = 18/46 (39%), Positives = 25/46 (54%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFE 375
+E+AP+IIF+ VQR +LELLNQ+DGF+
Sbjct: 255 KENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFD 300
>UNIPROTKB|Q4R7L3 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9541 "Macaca fascicularis" [GO:0022624 "proteasome
accessory complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 EMBL:AB168803
ProteinModelPortal:Q4R7L3 SMR:Q4R7L3 PRIDE:Q4R7L3 Uniprot:Q4R7L3
Length = 418
Score = 360 (131.8 bits), Expect = 2.2e-40, Sum P(2) = 2.2e-40
Identities = 69/166 (41%), Positives = 102/166 (61%)
Query: 135 VGEVVKPMDKKKVLVKVHPEGKFXXXXXXXXXXXXXTPNCRVALRNESYTLHKILPNKVD 194
+G+ ++ +D+ +V + PN VAL S L +LP + D
Sbjct: 89 IGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEAD 148
Query: 195 PLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPP 254
+ ++ ++ PD Y +GG+D Q +E++E +ELP+ H EL+ +GI P+GVL+YGPP
Sbjct: 149 SSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPP 208
Query: 255 GTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
G GKT+LA+AVAHHT FIRV GSE VQK++GEG RMVR++F +A
Sbjct: 209 GCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLA 254
Score = 160 (61.4 bits), Expect = 7.7e-14, Sum P(2) = 7.7e-14
Identities = 30/45 (66%), Positives = 38/45 (84%)
Query: 13 GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
GKT+LA+AVAHHT FIRV GSE VQK++GEG RMVR++F +A+
Sbjct: 211 GKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAK 255
Score = 86 (35.3 bits), Expect = 2.2e-40, Sum P(2) = 2.2e-40
Identities = 18/46 (39%), Positives = 25/46 (54%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFE 375
+E+AP+IIF+ VQR +LELLNQ+DGF+
Sbjct: 255 KENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFD 300
>MGI|MGI:1346093 [details] [associations]
symbol:Psmc4 "proteasome (prosome, macropain) 26S subunit,
ATPase, 4" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1346093
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 EMBL:CH466593 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK CTD:5704
OrthoDB:EOG4KD6M4 GeneTree:ENSGT00550000074962 EMBL:L76223
EMBL:AB040869 EMBL:AK077507 EMBL:AK153991 EMBL:AK160718
EMBL:AK167041 EMBL:BC012708 IPI:IPI00108895 RefSeq:NP_036004.2
UniGene:Mm.29582 PDB:3AJI PDBsum:3AJI ProteinModelPortal:P54775
SMR:P54775 IntAct:P54775 STRING:P54775 PhosphoSite:P54775
REPRODUCTION-2DPAGE:P54775 PaxDb:P54775 PRIDE:P54775
Ensembl:ENSMUST00000032824 GeneID:23996 KEGG:mmu:23996
InParanoid:Q6ZWN9 EvolutionaryTrace:P54775 NextBio:303909
Bgee:P54775 Genevestigator:P54775 GermOnline:ENSMUSG00000030603
Uniprot:P54775
Length = 418
Score = 360 (131.8 bits), Expect = 2.2e-40, Sum P(2) = 2.2e-40
Identities = 69/166 (41%), Positives = 102/166 (61%)
Query: 135 VGEVVKPMDKKKVLVKVHPEGKFXXXXXXXXXXXXXTPNCRVALRNESYTLHKILPNKVD 194
+G+ ++ +D+ +V + PN VAL S L +LP + D
Sbjct: 89 IGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEAD 148
Query: 195 PLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPP 254
+ ++ ++ PD Y +GG+D Q +E++E +ELP+ H EL+ +GI P+GVL+YGPP
Sbjct: 149 SSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPP 208
Query: 255 GTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
G GKT+LA+AVAHHT FIRV GSE VQK++GEG RMVR++F +A
Sbjct: 209 GCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLA 254
Score = 160 (61.4 bits), Expect = 7.7e-14, Sum P(2) = 7.7e-14
Identities = 30/45 (66%), Positives = 38/45 (84%)
Query: 13 GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
GKT+LA+AVAHHT FIRV GSE VQK++GEG RMVR++F +A+
Sbjct: 211 GKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAK 255
Score = 86 (35.3 bits), Expect = 2.2e-40, Sum P(2) = 2.2e-40
Identities = 18/46 (39%), Positives = 25/46 (54%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFE 375
+E+AP+IIF+ VQR +LELLNQ+DGF+
Sbjct: 255 KENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFD 300
>RGD|621102 [details] [associations]
symbol:Psmc4 "proteasome (prosome, macropain) 26S subunit,
ATPase, 4" species:10116 "Rattus norvegicus" [GO:0001824
"blastocyst development" evidence=IEA;ISO] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0006200 "ATP catabolic process" evidence=TAS]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0022624 "proteasome
accessory complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621102 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 GO:GO:0001824 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03063
OMA:DQTTNVK CTD:5704 OrthoDB:EOG4KD6M4 GeneTree:ENSGT00550000074962
EMBL:D50695 EMBL:BC063145 IPI:IPI00210158 RefSeq:NP_476463.1
UniGene:Rn.11341 PDB:2DWZ PDBsum:2DWZ ProteinModelPortal:Q63570
SMR:Q63570 IntAct:Q63570 STRING:Q63570 PhosphoSite:Q63570
PRIDE:Q63570 Ensembl:ENSRNOT00000025819 GeneID:117262
KEGG:rno:117262 UCSC:RGD:621102 InParanoid:Q63570
EvolutionaryTrace:Q63570 NextBio:620144 Genevestigator:Q63570
GermOnline:ENSRNOG00000018994 Uniprot:Q63570
Length = 418
Score = 360 (131.8 bits), Expect = 2.2e-40, Sum P(2) = 2.2e-40
Identities = 69/166 (41%), Positives = 102/166 (61%)
Query: 135 VGEVVKPMDKKKVLVKVHPEGKFXXXXXXXXXXXXXTPNCRVALRNESYTLHKILPNKVD 194
+G+ ++ +D+ +V + PN VAL S L +LP + D
Sbjct: 89 IGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEAD 148
Query: 195 PLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPP 254
+ ++ ++ PD Y +GG+D Q +E++E +ELP+ H EL+ +GI P+GVL+YGPP
Sbjct: 149 SSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPP 208
Query: 255 GTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
G GKT+LA+AVAHHT FIRV GSE VQK++GEG RMVR++F +A
Sbjct: 209 GCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLA 254
Score = 160 (61.4 bits), Expect = 7.7e-14, Sum P(2) = 7.7e-14
Identities = 30/45 (66%), Positives = 38/45 (84%)
Query: 13 GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
GKT+LA+AVAHHT FIRV GSE VQK++GEG RMVR++F +A+
Sbjct: 211 GKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAK 255
Score = 86 (35.3 bits), Expect = 2.2e-40, Sum P(2) = 2.2e-40
Identities = 18/46 (39%), Positives = 25/46 (54%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFE 375
+E+AP+IIF+ VQR +LELLNQ+DGF+
Sbjct: 255 KENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFD 300
>CGD|CAL0001552 [details] [associations]
symbol:PR26 species:5476 "Candida albicans" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0001552 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000088 EMBL:AACQ01000087 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03063 GO:GO:0005838 RefSeq:XP_715269.1
RefSeq:XP_715334.1 ProteinModelPortal:Q5A0L8 SMR:Q5A0L8
STRING:Q5A0L8 GeneID:3642981 GeneID:3643038 KEGG:cal:CaO19.13215
KEGG:cal:CaO19.5793 Uniprot:Q5A0L8
Length = 411
Score = 355 (130.0 bits), Expect = 2.8e-40, Sum P(2) = 2.8e-40
Identities = 78/213 (36%), Positives = 123/213 (57%)
Query: 89 KIE-ELQLIVAEKEQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPMDKKKV 147
K+E EL L++ ++E ++ ++ L ++ + +G+ ++P+D+
Sbjct: 36 KLEKELDLLLLQEEY----IKDEQRHLKRELVRAQEEVKRIKSVPLVIGQFLEPIDENTG 91
Query: 148 LVKVHPEGKFXXXXXXXXXXXXXTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPD 207
+V + + VAL S L ILP + D +S++ ++ PD
Sbjct: 92 IVSSTTGSNYVVRILSTLDRELLKASSSVALHRHSNALVDILPPEADSSISIVGEDQKPD 151
Query: 208 STYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAH 267
TY VGGLD Q +EIKE +ELP+ +L+ +GI P+GVLLYGPPGTGKT+L +AVA+
Sbjct: 152 VTYADVGGLDMQKQEIKEAVELPLTQGDLYSQIGIDPPRGVLLYGPPGTGKTMLVKAVAN 211
Query: 268 HTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
T +FIR++GSE VQK++GEG RMVR++F +A
Sbjct: 212 STTASFIRINGSEFVQKYLGEGPRMVRDVFRLA 244
Score = 147 (56.8 bits), Expect = 9.5e-13, Sum P(2) = 9.5e-13
Identities = 27/46 (58%), Positives = 39/46 (84%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKT+L +AVA+ T +FIR++GSE VQK++GEG RMVR++F +AR
Sbjct: 200 TGKTMLVKAVANSTTASFIRINGSEFVQKYLGEGPRMVRDVFRLAR 245
Score = 90 (36.7 bits), Expect = 2.8e-40, Sum P(2) = 2.8e-40
Identities = 19/48 (39%), Positives = 26/48 (54%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEAT 377
RE++P+IIF+ VQR +LELLNQ+DGF+ T
Sbjct: 245 RENSPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQT 292
>UNIPROTKB|Q5A0L8 [details] [associations]
symbol:PR26 "Likely 26S proteasome regulatory particle
ATPase Rpt3p" species:237561 "Candida albicans SC5314" [GO:0005838
"proteasome regulatory particle" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 CGD:CAL0001552
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:AACQ01000088 EMBL:AACQ01000087 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03063 GO:GO:0005838 RefSeq:XP_715269.1
RefSeq:XP_715334.1 ProteinModelPortal:Q5A0L8 SMR:Q5A0L8
STRING:Q5A0L8 GeneID:3642981 GeneID:3643038 KEGG:cal:CaO19.13215
KEGG:cal:CaO19.5793 Uniprot:Q5A0L8
Length = 411
Score = 355 (130.0 bits), Expect = 2.8e-40, Sum P(2) = 2.8e-40
Identities = 78/213 (36%), Positives = 123/213 (57%)
Query: 89 KIE-ELQLIVAEKEQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPMDKKKV 147
K+E EL L++ ++E ++ ++ L ++ + +G+ ++P+D+
Sbjct: 36 KLEKELDLLLLQEEY----IKDEQRHLKRELVRAQEEVKRIKSVPLVIGQFLEPIDENTG 91
Query: 148 LVKVHPEGKFXXXXXXXXXXXXXTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPD 207
+V + + VAL S L ILP + D +S++ ++ PD
Sbjct: 92 IVSSTTGSNYVVRILSTLDRELLKASSSVALHRHSNALVDILPPEADSSISIVGEDQKPD 151
Query: 208 STYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAH 267
TY VGGLD Q +EIKE +ELP+ +L+ +GI P+GVLLYGPPGTGKT+L +AVA+
Sbjct: 152 VTYADVGGLDMQKQEIKEAVELPLTQGDLYSQIGIDPPRGVLLYGPPGTGKTMLVKAVAN 211
Query: 268 HTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
T +FIR++GSE VQK++GEG RMVR++F +A
Sbjct: 212 STTASFIRINGSEFVQKYLGEGPRMVRDVFRLA 244
Score = 147 (56.8 bits), Expect = 9.5e-13, Sum P(2) = 9.5e-13
Identities = 27/46 (58%), Positives = 39/46 (84%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKT+L +AVA+ T +FIR++GSE VQK++GEG RMVR++F +AR
Sbjct: 200 TGKTMLVKAVANSTTASFIRINGSEFVQKYLGEGPRMVRDVFRLAR 245
Score = 90 (36.7 bits), Expect = 2.8e-40, Sum P(2) = 2.8e-40
Identities = 19/48 (39%), Positives = 26/48 (54%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEAT 377
RE++P+IIF+ VQR +LELLNQ+DGF+ T
Sbjct: 245 RENSPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQT 292
>SGD|S000005785 [details] [associations]
symbol:RPT4 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0016887
"ATPase activity" evidence=ISS] [GO:0045899 "positive regulation of
RNA polymerase II transcriptional preinitiation complex assembly"
evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IMP] [GO:0030433 "ER-associated protein
catabolic process" evidence=IMP] [GO:0032968 "positive regulation
of transcription elongation from RNA polymerase II promoter"
evidence=IMP] [GO:0006289 "nucleotide-excision repair"
evidence=IGI] [GO:0019904 "protein domain specific binding"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000005785 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0019904 EMBL:BK006948 GO:GO:0016887
GO:GO:0030433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
RefSeq:NP_014902.3 GeneID:854433 KEGG:sce:YOR259C KO:K03064
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GeneTree:ENSGT00550000074826 OMA:EHKEVES
GO:GO:0008540 OrthoDB:EOG40KC79 EMBL:U43720 EMBL:U93262 EMBL:Z75167
PIR:S67156 RefSeq:NP_014904.3 PDB:4B4T PDBsum:4B4T
ProteinModelPortal:P53549 SMR:P53549 DIP:DIP-1589N IntAct:P53549
MINT:MINT-397407 STRING:P53549 PaxDb:P53549 PeptideAtlas:P53549
EnsemblFungi:YOR259C GeneID:854435 KEGG:sce:YOR261C KO:K03038
NextBio:976664 Genevestigator:P53549 GermOnline:YOR259C
Uniprot:P53549
Length = 437
Score = 358 (131.1 bits), Expect = 3.6e-40, Sum P(2) = 3.6e-40
Identities = 78/202 (38%), Positives = 118/202 (58%)
Query: 99 EKEQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPMDKKKVLVKVHPEGKFX 158
++ QN+R L+ ++ ++ L+ G +GEV+K + ++K +VK ++
Sbjct: 76 QRRQNIRDLEKLYDKTENDIKALQSI-------GQLIGEVMKELSEEKYIVKASSGPRYI 128
Query: 159 XXXXXXXXXXXXTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDN 218
RV L + T+ +ILP + DPLV M + + T++ +GGL
Sbjct: 129 VGVRNSVDRSKLKKGVRVTLDITTLTIMRILPRETDPLVYNMTSFEQGEITFDGIGGLTE 188
Query: 219 QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSG 278
QI+E++EVIELP+K+PE+F +GI PKGVLLYGPPGTGKTLLA+AVA FI
Sbjct: 189 QIRELREVIELPLKNPEIFQRVGIKPPKGVLLYGPPGTGKTLLAKAVAATIGANFIFSPA 248
Query: 279 SELVQKFIGEGSRMVRELFVMA 300
S +V K+IGE +R++RE+F A
Sbjct: 249 SGIVDKYIGESARIIREMFAYA 270
Score = 104 (41.7 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 22/46 (47%), Positives = 31/46 (67%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLA+AVA FI S +V K+IGE +R++RE+F A+
Sbjct: 226 TGKTLLAKAVAATIGANFIFSPASGIVDKYIGESARIIREMFAYAK 271
Score = 86 (35.3 bits), Expect = 3.6e-40, Sum P(2) = 3.6e-40
Identities = 17/46 (36%), Positives = 23/46 (50%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFE 375
+EH P IIFM +QRT++ELL Q+DGF+
Sbjct: 271 KEHEPCIIFMDEVDAIGGRRFSEGTSADREIQRTLMELLTQMDGFD 316
>WB|WBGene00004503 [details] [associations]
symbol:rpt-3 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0002119 GO:GO:0000003
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK
EMBL:FO081210 PIR:A88485 RefSeq:NP_498429.1
ProteinModelPortal:P46502 SMR:P46502 DIP:DIP-24412N IntAct:P46502
MINT:MINT-212949 STRING:P46502 PaxDb:P46502
EnsemblMetazoa:F23F12.6.1 EnsemblMetazoa:F23F12.6.2 GeneID:175925
KEGG:cel:CELE_F23F12.6 UCSC:F23F12.6.1 CTD:175925 WormBase:F23F12.6
GeneTree:ENSGT00550000074962 InParanoid:P46502 NextBio:890338
Uniprot:P46502
Length = 414
Score = 352 (129.0 bits), Expect = 1.5e-39, Sum P(2) = 1.5e-39
Identities = 68/166 (40%), Positives = 103/166 (62%)
Query: 135 VGEVVKPMDKKKVLVKVHPEGKFXXXXXXXXXXXXXTPNCRVALRNESYTLHKILPNKVD 194
+G+ ++ +D+ +V + P C VAL S L +LP + D
Sbjct: 85 IGQFLEAVDQNHAIVGSTTGSNYYVRVLSILDRELLKPGCSVALHKYSNALVDVLPPEAD 144
Query: 195 PLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPP 254
+ ++ ++ PD +Y +GGLD Q +E++E +ELP+ H EL+ +GI P+GVL+YGPP
Sbjct: 145 SSIQMLRPDEKPDISYGDIGGLDMQKQEVREAVELPLTHGELYQQIGIDPPRGVLMYGPP 204
Query: 255 GTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
G GKT+LA+AVA +T +FIRV GSE VQK++GEG RMVR++F +A
Sbjct: 205 GCGKTMLAKAVAANTAASFIRVVGSEFVQKYLGEGPRMVRDVFRLA 250
Score = 144 (55.7 bits), Expect = 5.7e-12, Sum P(2) = 5.7e-12
Identities = 28/45 (62%), Positives = 38/45 (84%)
Query: 13 GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
GKT+LA+AVA +T +FIRV GSE VQK++GEG RMVR++F +A+
Sbjct: 207 GKTMLAKAVAANTAASFIRVVGSEFVQKYLGEGPRMVRDVFRLAK 251
Score = 86 (35.3 bits), Expect = 1.5e-39, Sum P(2) = 1.5e-39
Identities = 18/46 (39%), Positives = 25/46 (54%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFE 375
+E++PSIIF+ VQR +LELLNQ+DGF+
Sbjct: 251 KENSPSIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFD 296
>SGD|S000002802 [details] [associations]
symbol:RPT3 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000002802 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006938 GO:GO:0006511 GO:GO:0017111 GO:GO:0045899 EMBL:U32274
KO:K07101 RefSeq:NP_010687.3 GeneID:852008 KEGG:sce:YDR399W
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03063
OMA:DQTTNVK GeneTree:ENSGT00550000074962 OrthoDB:EOG46HKKC
EMBL:X73570 EMBL:U06229 PIR:S69678 RefSeq:NP_010682.3 PDB:2DZN
PDB:2DZO PDBsum:2DZN PDBsum:2DZO ProteinModelPortal:P33298
SMR:P33298 DIP:DIP-1587N IntAct:P33298 MINT:MINT-383865
STRING:P33298 PaxDb:P33298 PeptideAtlas:P33298 EnsemblFungi:YDR394W
GeneID:852003 KEGG:sce:YDR394W EvolutionaryTrace:P33298
NextBio:970192 Genevestigator:P33298 GermOnline:YDR394W
Uniprot:P33298
Length = 428
Score = 353 (129.3 bits), Expect = 1.9e-39, Sum P(2) = 1.9e-39
Identities = 79/207 (38%), Positives = 116/207 (56%)
Query: 99 EKEQNLRRLQA-----QRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPMDKKKVLVKVHP 153
EKE L LQ ++ L +++ + +G+ ++P+D+ +V
Sbjct: 55 EKEYELLTLQEDYIKDEQRHLKRELKRAQEEVKRIQSVPLVIGQFLEPIDQNTGIVSSTT 114
Query: 154 EGKFXXXXXXXXXXXXXTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMV 213
+ P+ VAL S L ILP D +S+M + PD TY V
Sbjct: 115 GMSYVVRILSTLDRELLKPSMSVALHRHSNALVDILPPDSDSSISVMGENEKPDVTYADV 174
Query: 214 GGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTF 273
GGLD Q +EI+E +ELP+ +L++ +GI P+GVLLYGPPGTGKT+L +AVA+ T+ F
Sbjct: 175 GGLDMQKQEIREAVELPLVQADLYEQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTKAAF 234
Query: 274 IRVSGSELVQKFIGEGSRMVRELFVMA 300
IRV+GSE V K++GEG RMVR++F +A
Sbjct: 235 IRVNGSEFVHKYLGEGPRMVRDVFRLA 261
Score = 144 (55.7 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 27/46 (58%), Positives = 38/46 (82%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKT+L +AVA+ T+ FIRV+GSE V K++GEG RMVR++F +AR
Sbjct: 217 TGKTMLVKAVANSTKAAFIRVNGSEFVHKYLGEGPRMVRDVFRLAR 262
Score = 84 (34.6 bits), Expect = 1.9e-39, Sum P(2) = 1.9e-39
Identities = 18/46 (39%), Positives = 24/46 (52%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFE 375
RE+APSIIF+ VQR ++ELL Q+DGF+
Sbjct: 262 RENAPSIIFIDEVDSIATKRFDAQTGSDREVQRILIELLTQMDGFD 307
>UNIPROTKB|J9NWB0 [details] [associations]
symbol:J9NWB0 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR005937 Pfam:PF00004 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074818 EMBL:AAEX03014432
Ensembl:ENSCAFT00000039483 OMA:AGSELIQ Uniprot:J9NWB0
Length = 436
Score = 333 (122.3 bits), Expect = 3.2e-39, Sum P(2) = 3.2e-39
Identities = 79/215 (36%), Positives = 117/215 (54%)
Query: 89 KIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPMDKKKVL 148
K+E ++ + +E+ +R Q Q L K R V + + +D V+
Sbjct: 64 KLERIKDYLLMEEEFIRN-QEQMKPLEEKQEEERSKVDDLRGTSMSVVTLEEIIDGNHVI 122
Query: 149 VKVHPEGKFXXXXXXXXXXXXXTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV--- 205
V + P C L ++ + + + + DPLV++M VEKV
Sbjct: 123 VSTSVGSEHYVSILSFVDKDLLEPGCSNLLNHKLHAVIVVFMDDTDPLVTVMKVEKVEKA 182
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
P TY + GLDNQI+EIKE +ELP+ HPE ++ +GI PKGV+LYGPPGT K AV
Sbjct: 183 PQETYADIRGLDNQIQEIKESLELPLTHPENYEEMGIKPPKGVILYGPPGTVK-----AV 237
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
A+ T TF+RV+GSEL+QK++G+G ++VRE F +A
Sbjct: 238 ANRTSATFLRVAGSELIQKYLGDGPKVVRESFRVA 272
Score = 118 (46.6 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 23/47 (48%), Positives = 35/47 (74%)
Query: 10 IVSGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
I+ G +AVA+ T TF+RV+GSEL+QK++G+G ++VRE F +A
Sbjct: 226 ILYGPPGTVKAVANRTSATFLRVAGSELIQKYLGDGPKVVRESFRVA 272
Score = 102 (41.0 bits), Expect = 3.2e-39, Sum P(2) = 3.2e-39
Identities = 21/46 (45%), Positives = 26/46 (56%)
Query: 331 EHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEA 376
EHAPSI+F+ +QRTMLELLNQLDGF++
Sbjct: 274 EHAPSIVFIDEIDAIGTRRYDSNSGGEREIQRTMLELLNQLDGFDS 319
>UNIPROTKB|H0YJC0 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 Pfam:PF00004 SMART:SM00382 GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0017111
EMBL:AL133453 HGNC:HGNC:9553 Ensembl:ENST00000556813 Uniprot:H0YJC0
Length = 262
Score = 395 (144.1 bits), Expect = 4.0e-39, Sum P(2) = 4.0e-39
Identities = 83/199 (41%), Positives = 116/199 (58%)
Query: 99 EKEQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPMDKKKVLVKVHPEGKFX 158
E + L+ L+ Q EL + G VGEV+K + ++K +VK ++
Sbjct: 21 EIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYV 80
Query: 159 XXXXXXXXXXXXTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDN 218
P RVAL + T+ + LP +VDPLV M E + +Y +GGL
Sbjct: 81 VGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSE 140
Query: 219 QIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSG 278
QI+E++EVIELP+ +PELF +GI PKG LLYGPPGTGKTLLARAVA +C F++V
Sbjct: 141 QIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVS 200
Query: 279 SELVQKFIGEGSRMVRELF 297
S +V K+IGE +R++RE+F
Sbjct: 201 SSIVDKYIGESARLIREMF 219
Score = 140 (54.3 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 31/73 (42%), Positives = 45/73 (61%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSR--GTEFFT 69
+GKTLLARAVA +C F++V S +V K+IGE +R++RE+F AR E
Sbjct: 178 TGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDA 237
Query: 70 MDVDEAIKSSEGF 82
+D + +K S+GF
Sbjct: 238 IDYEAIVKLSDGF 250
Score = 39 (18.8 bits), Expect = 4.0e-39, Sum P(2) = 4.0e-39
Identities = 7/10 (70%), Positives = 8/10 (80%)
Query: 330 REHAPSIIFM 339
R+H P IIFM
Sbjct: 223 RDHQPCIIFM 232
>UNIPROTKB|J9NWA6 [details] [associations]
symbol:LOC100687152 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242
EMBL:AAEX03026457 Ensembl:ENSCAFT00000026372 OMA:REAVEQP
Uniprot:J9NWA6
Length = 434
Score = 337 (123.7 bits), Expect = 4.0e-39, Sum P(2) = 4.0e-39
Identities = 65/132 (49%), Positives = 90/132 (68%)
Query: 172 PNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPV 231
P V + +SY + + LP + D V M V++ P Y +GGLD QI+E+ E I LP+
Sbjct: 142 PGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPM 201
Query: 232 KHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSR 291
H E F+ LGI PKGVL+YGPPGTGKTLLARA A T+ TF++++G +LVQ FIG+G++
Sbjct: 202 NHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAK 261
Query: 292 MVRELFVMASLK 303
+VR+ F +A K
Sbjct: 262 LVRDAFALAKEK 273
Score = 138 (53.6 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 26/51 (50%), Positives = 40/51 (78%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
+GKTLLARA A T+ TF++++G +LVQ FIG+G+++VR+ F +A+ K S
Sbjct: 226 TGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPS 276
Score = 97 (39.2 bits), Expect = 4.0e-39, Sum P(2) = 4.0e-39
Identities = 22/46 (47%), Positives = 25/46 (54%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFE 375
+E APSIIF+ VQRTMLELLNQLDGF+
Sbjct: 271 KEKAPSIIFIDELDATGTKRFDSEKAGDREVQRTMLELLNQLDGFQ 316
>UNIPROTKB|O42586 [details] [associations]
symbol:psmc3-b "26S protease regulatory subunit 6A-B"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 EMBL:Y10460 UniGene:Xl.113 ProteinModelPortal:O42586
Xenbase:XB-GENE-1009853 Uniprot:O42586
Length = 404
Score = 335 (123.0 bits), Expect = 4.0e-39, Sum P(2) = 4.0e-39
Identities = 65/132 (49%), Positives = 90/132 (68%)
Query: 172 PNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPV 231
P V + +SY + + LP + D V M V++ P Y +GGLD QI+E+ E I LP+
Sbjct: 112 PGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPM 171
Query: 232 KHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSR 291
H E F+ LGI PKGVL+YGPPGTGKTLLARA A T+ TF++++G +LVQ FIG+G++
Sbjct: 172 NHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAK 231
Query: 292 MVRELFVMASLK 303
+VR+ F +A K
Sbjct: 232 LVRDAFSLAKEK 243
Score = 136 (52.9 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 26/51 (50%), Positives = 40/51 (78%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
+GKTLLARA A T+ TF++++G +LVQ FIG+G+++VR+ F +A+ K S
Sbjct: 196 TGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFSLAKEKAPS 246
Score = 99 (39.9 bits), Expect = 4.0e-39, Sum P(2) = 4.0e-39
Identities = 23/48 (47%), Positives = 26/48 (54%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEAT 377
+E APSIIF+ VQRTMLELLNQLDGF+ T
Sbjct: 241 KEKAPSIIFIDELDAIGNKRFDSEKAGDREVQRTMLELLNQLDGFQPT 288
>FB|FBgn0028684 [details] [associations]
symbol:Rpt5 "Regulatory particle triple-A ATPase 5"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0004175
"endopeptidase activity" evidence=IDA;NAS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS;IDA] [GO:0006508 "proteolysis"
evidence=ISS;IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009987 "cellular process"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR005937 Pfam:PF00004 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 HSSP:Q01853 TIGRFAMs:TIGR01242 GO:GO:0008540
ChiTaRS:PSMC3 FlyBase:FBgn0028684 EMBL:AF134402
ProteinModelPortal:Q9XZC3 STRING:Q9XZC3 PRIDE:Q9XZC3
InParanoid:Q9XZC3 ArrayExpress:Q9XZC3 Bgee:Q9XZC3 Uniprot:Q9XZC3
Length = 431
Score = 313 (115.2 bits), Expect = 4.4e-39, Sum P(3) = 4.4e-39
Identities = 61/132 (46%), Positives = 87/132 (65%)
Query: 172 PNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPV 231
P + + Y + + LP + D V M V++ P + +GGLD QI+E+ E + LP+
Sbjct: 140 PGDLAGVNKDFYLILETLPAEYDARVKAMEVDERPTEQFSDIGGLDKQIQELIEAVVLPM 199
Query: 232 KHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSR 291
H E F LGI PKGV+LYGPPGTGKTLLARA A T+ TF++++G +LVQ FIG+G++
Sbjct: 200 THKEKFKNLGIHPPKGVILYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAK 259
Query: 292 MVRELFVMASLK 303
+VR+ F +A K
Sbjct: 260 LVRDAFALAKEK 271
Score = 134 (52.2 bits), Expect = 2.3e-11, Sum P(2) = 2.3e-11
Identities = 25/48 (52%), Positives = 39/48 (81%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTLLARA A T+ TF++++G +LVQ FIG+G+++VR+ F +A+ K
Sbjct: 224 TGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEK 271
Score = 92 (37.4 bits), Expect = 4.4e-39, Sum P(3) = 4.4e-39
Identities = 21/48 (43%), Positives = 26/48 (54%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEAT 377
+E AP+IIF+ VQRTMLELLNQL+GF +T
Sbjct: 269 KEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLNGFSST 316
Score = 39 (18.8 bits), Expect = 4.4e-39, Sum P(3) = 4.4e-39
Identities = 17/76 (22%), Positives = 32/76 (42%)
Query: 71 DVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKVRMLRXXXXXXXX 130
D E IK ++ PY V+ + EL + ++E++ + N+ K +++
Sbjct: 68 DNTEKIKVNKTL-PYLVSNVIELLDVDPQEEEDDGSVTVLDNQRKGKCAVIKTSTRQAYF 126
Query: 131 X---GSYVGEVVKPMD 143
G E +KP D
Sbjct: 127 LPVIGLVDAEKLKPGD 142
>UNIPROTKB|F1NDQ1 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242
EMBL:AADN02033470 EMBL:AADN02033469 IPI:IPI00819977
Ensembl:ENSGALT00000013163 Uniprot:F1NDQ1
Length = 385
Score = 337 (123.7 bits), Expect = 5.1e-39, Sum P(2) = 5.1e-39
Identities = 65/132 (49%), Positives = 90/132 (68%)
Query: 172 PNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPV 231
P V + +SY + + LP + D V M V++ P Y +GGLD QI+E+ E I LP+
Sbjct: 93 PGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPM 152
Query: 232 KHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSR 291
H E F+ LGI PKGVL+YGPPGTGKTLLARA A T+ TF++++G +LVQ FIG+G++
Sbjct: 153 NHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAK 212
Query: 292 MVRELFVMASLK 303
+VR+ F +A K
Sbjct: 213 LVRDAFALAKEK 224
Score = 138 (53.6 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 26/51 (50%), Positives = 40/51 (78%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
+GKTLLARA A T+ TF++++G +LVQ FIG+G+++VR+ F +A+ K S
Sbjct: 177 TGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPS 227
Score = 96 (38.9 bits), Expect = 5.1e-39, Sum P(2) = 5.1e-39
Identities = 22/46 (47%), Positives = 25/46 (54%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFE 375
+E APSIIF+ VQRTMLELLNQLDGF+
Sbjct: 222 KEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQ 267
>UNIPROTKB|F1P3L9 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242 OMA:GALMYGP
EMBL:AADN02033470 EMBL:AADN02033469 IPI:IPI00601469
Ensembl:ENSGALT00000038503 Uniprot:F1P3L9
Length = 389
Score = 337 (123.7 bits), Expect = 5.1e-39, Sum P(2) = 5.1e-39
Identities = 65/132 (49%), Positives = 90/132 (68%)
Query: 172 PNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPV 231
P V + +SY + + LP + D V M V++ P Y +GGLD QI+E+ E I LP+
Sbjct: 97 PGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPM 156
Query: 232 KHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSR 291
H E F+ LGI PKGVL+YGPPGTGKTLLARA A T+ TF++++G +LVQ FIG+G++
Sbjct: 157 NHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAK 216
Query: 292 MVRELFVMASLK 303
+VR+ F +A K
Sbjct: 217 LVRDAFALAKEK 228
Score = 138 (53.6 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 26/51 (50%), Positives = 40/51 (78%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
+GKTLLARA A T+ TF++++G +LVQ FIG+G+++VR+ F +A+ K S
Sbjct: 181 TGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPS 231
Score = 96 (38.9 bits), Expect = 5.1e-39, Sum P(2) = 5.1e-39
Identities = 22/46 (47%), Positives = 25/46 (54%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFE 375
+E APSIIF+ VQRTMLELLNQLDGF+
Sbjct: 226 KEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQ 271
>UNIPROTKB|F1PBK7 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 GeneTree:ENSGT00560000077230
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:AAEX03011486
Ensembl:ENSCAFT00000013842 Uniprot:F1PBK7
Length = 439
Score = 337 (123.7 bits), Expect = 5.1e-39, Sum P(2) = 5.1e-39
Identities = 65/132 (49%), Positives = 90/132 (68%)
Query: 172 PNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPV 231
P V + +SY + + LP + D V M V++ P Y +GGLD QI+E+ E I LP+
Sbjct: 147 PGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPM 206
Query: 232 KHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSR 291
H E F+ LGI PKGVL+YGPPGTGKTLLARA A T+ TF++++G +LVQ FIG+G++
Sbjct: 207 NHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAK 266
Query: 292 MVRELFVMASLK 303
+VR+ F +A K
Sbjct: 267 LVRDAFALAKEK 278
Score = 138 (53.6 bits), Expect = 3.2e-12, Sum P(2) = 3.2e-12
Identities = 26/51 (50%), Positives = 40/51 (78%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
+GKTLLARA A T+ TF++++G +LVQ FIG+G+++VR+ F +A+ K S
Sbjct: 231 TGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPS 281
Score = 96 (38.9 bits), Expect = 5.1e-39, Sum P(2) = 5.1e-39
Identities = 22/46 (47%), Positives = 25/46 (54%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFE 375
+E APSIIF+ VQRTMLELLNQLDGF+
Sbjct: 276 KEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQ 321
>UNIPROTKB|E9PM69 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AC090559 TIGRFAMs:TIGR01242 HGNC:HGNC:9549
ChiTaRS:PSMC3 IPI:IPI00979423 ProteinModelPortal:E9PM69 SMR:E9PM69
PRIDE:E9PM69 Ensembl:ENST00000530912 ArrayExpress:E9PM69
Bgee:E9PM69 Uniprot:E9PM69
Length = 397
Score = 337 (123.7 bits), Expect = 5.1e-39, Sum P(2) = 5.1e-39
Identities = 65/132 (49%), Positives = 90/132 (68%)
Query: 172 PNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPV 231
P V + +SY + + LP + D V M V++ P Y +GGLD QI+E+ E I LP+
Sbjct: 105 PGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPM 164
Query: 232 KHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSR 291
H E F+ LGI PKGVL+YGPPGTGKTLLARA A T+ TF++++G +LVQ FIG+G++
Sbjct: 165 NHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAK 224
Query: 292 MVRELFVMASLK 303
+VR+ F +A K
Sbjct: 225 LVRDAFALAKEK 236
Score = 138 (53.6 bits), Expect = 2.2e-12, Sum P(2) = 2.2e-12
Identities = 26/51 (50%), Positives = 40/51 (78%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
+GKTLLARA A T+ TF++++G +LVQ FIG+G+++VR+ F +A+ K S
Sbjct: 189 TGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPS 239
Score = 96 (38.9 bits), Expect = 5.1e-39, Sum P(2) = 5.1e-39
Identities = 22/46 (47%), Positives = 25/46 (54%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFE 375
+E APSIIF+ VQRTMLELLNQLDGF+
Sbjct: 234 KEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQ 279
>UNIPROTKB|P17980 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0001824
"blastocyst development" evidence=IEA] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA] [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=TAS] [GO:0003714 "transcription corepressor
activity" evidence=TAS] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] Reactome:REACT_13505 Reactome:REACT_578
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_6850
Reactome:REACT_111217 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0003714
GO:GO:0006915 GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566
GO:GO:0019048 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
EMBL:CH471064 Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981
GO:GO:0044281 GO:GO:0000082 GO:GO:0003713 GO:GO:0051436
GO:GO:0017111 GO:GO:0000932 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
GO:GO:0001824 Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624 OMA:GALMYGP
EMBL:AK313518 EMBL:BC008713 EMBL:BC073165 EMBL:BC106920
EMBL:BC107804 EMBL:AK222485 EMBL:M34079 EMBL:CR456731
IPI:IPI00018398 PIR:A34832 RefSeq:NP_002795.2 UniGene:Hs.250758
ProteinModelPortal:P17980 SMR:P17980 DIP:DIP-27555N IntAct:P17980
MINT:MINT-1149785 STRING:P17980 PhosphoSite:P17980 DMDM:20532406
REPRODUCTION-2DPAGE:IPI00018398 PaxDb:P17980 PeptideAtlas:P17980
PRIDE:P17980 DNASU:5702 Ensembl:ENST00000298852 GeneID:5702
KEGG:hsa:5702 UCSC:uc001nfh.2 CTD:5702 GeneCards:GC11M047440
HGNC:HGNC:9549 HPA:HPA006065 MIM:186852 neXtProt:NX_P17980
PharmGKB:PA33894 InParanoid:P17980 OrthoDB:EOG46143Z
PhylomeDB:P17980 ChiTaRS:PSMC3 GenomeRNAi:5702 NextBio:22154
PMAP-CutDB:P17980 ArrayExpress:P17980 Bgee:P17980 CleanEx:HS_PSMC3
Genevestigator:P17980 GermOnline:ENSG00000165916 Uniprot:P17980
Length = 439
Score = 337 (123.7 bits), Expect = 5.1e-39, Sum P(2) = 5.1e-39
Identities = 65/132 (49%), Positives = 90/132 (68%)
Query: 172 PNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPV 231
P V + +SY + + LP + D V M V++ P Y +GGLD QI+E+ E I LP+
Sbjct: 147 PGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPM 206
Query: 232 KHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSR 291
H E F+ LGI PKGVL+YGPPGTGKTLLARA A T+ TF++++G +LVQ FIG+G++
Sbjct: 207 NHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAK 266
Query: 292 MVRELFVMASLK 303
+VR+ F +A K
Sbjct: 267 LVRDAFALAKEK 278
Score = 138 (53.6 bits), Expect = 3.2e-12, Sum P(2) = 3.2e-12
Identities = 26/51 (50%), Positives = 40/51 (78%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
+GKTLLARA A T+ TF++++G +LVQ FIG+G+++VR+ F +A+ K S
Sbjct: 231 TGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPS 281
Score = 96 (38.9 bits), Expect = 5.1e-39, Sum P(2) = 5.1e-39
Identities = 22/46 (47%), Positives = 25/46 (54%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFE 375
+E APSIIF+ VQRTMLELLNQLDGF+
Sbjct: 276 KEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQ 321
>UNIPROTKB|F1SID4 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 GO:GO:0001824
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:CU856312
Ensembl:ENSSSCT00000014459 Uniprot:F1SID4
Length = 446
Score = 337 (123.7 bits), Expect = 5.1e-39, Sum P(2) = 5.1e-39
Identities = 65/132 (49%), Positives = 90/132 (68%)
Query: 172 PNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPV 231
P V + +SY + + LP + D V M V++ P Y +GGLD QI+E+ E I LP+
Sbjct: 154 PGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPM 213
Query: 232 KHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSR 291
H E F+ LGI PKGVL+YGPPGTGKTLLARA A T+ TF++++G +LVQ FIG+G++
Sbjct: 214 NHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAK 273
Query: 292 MVRELFVMASLK 303
+VR+ F +A K
Sbjct: 274 LVRDAFALAKEK 285
Score = 138 (53.6 bits), Expect = 3.4e-12, Sum P(2) = 3.4e-12
Identities = 26/51 (50%), Positives = 40/51 (78%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
+GKTLLARA A T+ TF++++G +LVQ FIG+G+++VR+ F +A+ K S
Sbjct: 238 TGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPS 288
Score = 96 (38.9 bits), Expect = 5.1e-39, Sum P(2) = 5.1e-39
Identities = 22/46 (47%), Positives = 25/46 (54%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFE 375
+E APSIIF+ VQRTMLELLNQLDGF+
Sbjct: 283 KEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQ 328
>UNIPROTKB|O42587 [details] [associations]
symbol:psmc3-a "26S protease regulatory subunit 6A-A"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 CTD:4913 TIGRFAMs:TIGR01242 EMBL:Y10461
RefSeq:NP_001080249.1 UniGene:Xl.12803 ProteinModelPortal:O42587
PRIDE:O42587 GeneID:379941 KEGG:xla:379941 Xenbase:XB-GENE-962533
HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624 Uniprot:O42587
Length = 405
Score = 337 (123.7 bits), Expect = 5.1e-39, Sum P(2) = 5.1e-39
Identities = 65/132 (49%), Positives = 90/132 (68%)
Query: 172 PNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPV 231
P V + +SY + + LP + D V M V++ P Y +GGLD QI+E+ E I LP+
Sbjct: 131 PGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPM 190
Query: 232 KHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSR 291
H E F+ LGI PKGVL+YGPPGTGKTLLARA A T+ TF++++G +LVQ FIG+G++
Sbjct: 191 NHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAK 250
Query: 292 MVRELFVMASLK 303
+VR+ F +A K
Sbjct: 251 LVRDAFALAKEK 262
Score = 138 (53.6 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 26/51 (50%), Positives = 40/51 (78%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
+GKTLLARA A T+ TF++++G +LVQ FIG+G+++VR+ F +A+ K S
Sbjct: 215 TGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPS 265
Score = 96 (38.9 bits), Expect = 5.1e-39, Sum P(2) = 5.1e-39
Identities = 22/46 (47%), Positives = 25/46 (54%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFE 375
+E APSIIF+ VQRTMLELLNQLDGF+
Sbjct: 260 KEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQ 305
>MGI|MGI:1098754 [details] [associations]
symbol:Psmc3 "proteasome (prosome, macropain) 26S subunit,
ATPase 3" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 MGI:MGI:1098754 GO:GO:0005524 GO:GO:0005634
GO:GO:0030163 GO:GO:0017111 GO:GO:0000932
GeneTree:ENSGT00560000077230 GO:GO:0001824 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624
CTD:5702 ChiTaRS:PSMC3 EMBL:D49686 EMBL:AB040858 EMBL:AY902337
EMBL:AL691439 EMBL:BC005783 IPI:IPI00133206 RefSeq:NP_032974.2
UniGene:Mm.289832 ProteinModelPortal:O88685 SMR:O88685
IntAct:O88685 STRING:O88685 PhosphoSite:O88685 PaxDb:O88685
PRIDE:O88685 Ensembl:ENSMUST00000067663 GeneID:19182 KEGG:mmu:19182
NextBio:295874 Bgee:O88685 Genevestigator:O88685
GermOnline:ENSMUSG00000002102 Uniprot:O88685
Length = 442
Score = 337 (123.7 bits), Expect = 5.1e-39, Sum P(2) = 5.1e-39
Identities = 65/132 (49%), Positives = 90/132 (68%)
Query: 172 PNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPV 231
P V + +SY + + LP + D V M V++ P Y +GGLD QI+E+ E I LP+
Sbjct: 150 PGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPM 209
Query: 232 KHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSR 291
H E F+ LGI PKGVL+YGPPGTGKTLLARA A T+ TF++++G +LVQ FIG+G++
Sbjct: 210 NHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAK 269
Query: 292 MVRELFVMASLK 303
+VR+ F +A K
Sbjct: 270 LVRDAFALAKEK 281
Score = 138 (53.6 bits), Expect = 3.3e-12, Sum P(2) = 3.3e-12
Identities = 26/51 (50%), Positives = 40/51 (78%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
+GKTLLARA A T+ TF++++G +LVQ FIG+G+++VR+ F +A+ K S
Sbjct: 234 TGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPS 284
Score = 96 (38.9 bits), Expect = 5.1e-39, Sum P(2) = 5.1e-39
Identities = 22/46 (47%), Positives = 25/46 (54%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFE 375
+E APSIIF+ VQRTMLELLNQLDGF+
Sbjct: 279 KEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQ 324
>RGD|61905 [details] [associations]
symbol:Psmc3 "proteasome (prosome, macropain) 26S subunit, ATPase
3" species:10116 "Rattus norvegicus" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0001824 "blastocyst development"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA;ISO;ISS]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:61905 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0030163 GO:GO:0017111
GO:GO:0000932 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
KO:K03065 GO:GO:0022624 CTD:5702 EMBL:D83522 EMBL:U77918
IPI:IPI00421528 RefSeq:NP_113783.1 UniGene:Rn.11173
ProteinModelPortal:Q63569 IntAct:Q63569 STRING:Q63569
PhosphoSite:Q63569 PRIDE:Q63569 GeneID:29677 KEGG:rno:29677
UCSC:RGD:61905 NextBio:610019 ArrayExpress:Q63569
Genevestigator:Q63569 GermOnline:ENSRNOG00000011414 Uniprot:Q63569
Length = 439
Score = 337 (123.7 bits), Expect = 5.1e-39, Sum P(2) = 5.1e-39
Identities = 65/132 (49%), Positives = 90/132 (68%)
Query: 172 PNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPV 231
P V + +SY + + LP + D V M V++ P Y +GGLD QI+E+ E I LP+
Sbjct: 147 PGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPM 206
Query: 232 KHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSR 291
H E F+ LGI PKGVL+YGPPGTGKTLLARA A T+ TF++++G +LVQ FIG+G++
Sbjct: 207 NHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAK 266
Query: 292 MVRELFVMASLK 303
+VR+ F +A K
Sbjct: 267 LVRDAFALAKEK 278
Score = 138 (53.6 bits), Expect = 3.2e-12, Sum P(2) = 3.2e-12
Identities = 26/51 (50%), Positives = 40/51 (78%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
+GKTLLARA A T+ TF++++G +LVQ FIG+G+++VR+ F +A+ K S
Sbjct: 231 TGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPS 281
Score = 96 (38.9 bits), Expect = 5.1e-39, Sum P(2) = 5.1e-39
Identities = 22/46 (47%), Positives = 25/46 (54%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFE 375
+E APSIIF+ VQRTMLELLNQLDGF+
Sbjct: 276 KEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQ 321
>UNIPROTKB|Q6P6U2 [details] [associations]
symbol:Psmc3 "26S protease regulatory subunit 6A"
species:10116 "Rattus norvegicus" [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:61905 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 GeneTree:ENSGT00560000077230 EMBL:CH473949
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
IPI:IPI00421528 UniGene:Rn.11173 EMBL:BC062019 SMR:Q6P6U2
IntAct:Q6P6U2 STRING:Q6P6U2 Ensembl:ENSRNOT00000015757
Genevestigator:Q6P6U2 Uniprot:Q6P6U2
Length = 442
Score = 337 (123.7 bits), Expect = 5.1e-39, Sum P(2) = 5.1e-39
Identities = 65/132 (49%), Positives = 90/132 (68%)
Query: 172 PNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPV 231
P V + +SY + + LP + D V M V++ P Y +GGLD QI+E+ E I LP+
Sbjct: 150 PGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPM 209
Query: 232 KHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSR 291
H E F+ LGI PKGVL+YGPPGTGKTLLARA A T+ TF++++G +LVQ FIG+G++
Sbjct: 210 NHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAK 269
Query: 292 MVRELFVMASLK 303
+VR+ F +A K
Sbjct: 270 LVRDAFALAKEK 281
Score = 138 (53.6 bits), Expect = 3.3e-12, Sum P(2) = 3.3e-12
Identities = 26/51 (50%), Positives = 40/51 (78%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
+GKTLLARA A T+ TF++++G +LVQ FIG+G+++VR+ F +A+ K S
Sbjct: 234 TGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPS 284
Score = 96 (38.9 bits), Expect = 5.1e-39, Sum P(2) = 5.1e-39
Identities = 22/46 (47%), Positives = 25/46 (54%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFE 375
+E APSIIF+ VQRTMLELLNQLDGF+
Sbjct: 279 KEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQ 324
>ZFIN|ZDB-GENE-030131-666 [details] [associations]
symbol:psmc3 "proteasome (prosome, macropain) 26S
subunit, ATPase, 3" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-666 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 GeneTree:ENSGT00560000077230
TIGRFAMs:TIGR01242 EMBL:BX957297 IPI:IPI00817732 PRIDE:F1QJQ2
Ensembl:ENSDART00000133705 ArrayExpress:F1QJQ2 Bgee:F1QJQ2
Uniprot:F1QJQ2
Length = 427
Score = 337 (123.7 bits), Expect = 5.1e-39, Sum P(2) = 5.1e-39
Identities = 65/132 (49%), Positives = 90/132 (68%)
Query: 172 PNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPV 231
P V + +SY + + LP + D V M V++ P Y +GGLD QI+E+ E I LP+
Sbjct: 135 PGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPM 194
Query: 232 KHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSR 291
H E F+ LGI PKGVL+YGPPGTGKTLLARA A T+ TF++++G +LVQ FIG+G++
Sbjct: 195 NHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAK 254
Query: 292 MVRELFVMASLK 303
+VR+ F +A K
Sbjct: 255 LVRDAFALAKEK 266
Score = 138 (53.6 bits), Expect = 2.9e-12, Sum P(2) = 2.9e-12
Identities = 26/51 (50%), Positives = 40/51 (78%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
+GKTLLARA A T+ TF++++G +LVQ FIG+G+++VR+ F +A+ K S
Sbjct: 219 TGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPS 269
Score = 96 (38.9 bits), Expect = 5.1e-39, Sum P(2) = 5.1e-39
Identities = 22/46 (47%), Positives = 25/46 (54%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFE 375
+E APSIIF+ VQRTMLELLNQLDGF+
Sbjct: 264 KEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQ 309
>GENEDB_PFALCIPARUM|PFD0665c [details] [associations]
symbol:PFD0665c "26s proteasome aaa-ATPase
subunit Rpt3, putative" species:5833 "Plasmodium falciparum"
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0016887 GO:GO:0006511 HSSP:Q01853
EMBL:AL844503 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03063
OMA:DQTTNVK ProtClustDB:PTZ00454 GO:GO:0005838
RefSeq:XP_001351444.1 ProteinModelPortal:Q8I1V1 IntAct:Q8I1V1
MINT:MINT-1573247 PRIDE:Q8I1V1 EnsemblProtists:PFD0665c:mRNA
GeneID:812570 KEGG:pfa:PFD0665c EuPathDB:PlasmoDB:PF3D7_0413600
Uniprot:Q8I1V1
Length = 392
Score = 343 (125.8 bits), Expect = 6.5e-39, Sum P(2) = 6.5e-39
Identities = 64/129 (49%), Positives = 94/129 (72%)
Query: 172 PNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPV 231
P+ VAL S+++ ILP++ D + L+ + + P+ Y +GGLD Q +E+KE +ELP+
Sbjct: 99 PSVSVALHRHSHSIVNILPSESDSSIQLLQITERPNVKYTDLGGLDMQKQEMKEAVELPL 158
Query: 232 KHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSR 291
PEL++ +GI P G+L+YGPPGTGKT+L +AVA+ T+ TFI V GSE VQK++GEG R
Sbjct: 159 TCPELYEKIGIEPPMGILIYGPPGTGKTMLVKAVANETQVTFIGVVGSEFVQKYLGEGPR 218
Query: 292 MVRELFVMA 300
MVR++F +A
Sbjct: 219 MVRDVFRLA 227
Score = 145 (56.1 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 28/46 (60%), Positives = 38/46 (82%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKT+L +AVA+ T+ TFI V GSE VQK++GEG RMVR++F +AR
Sbjct: 183 TGKTMLVKAVANETQVTFIGVVGSEFVQKYLGEGPRMVRDVFRLAR 228
Score = 89 (36.4 bits), Expect = 6.5e-39, Sum P(2) = 6.5e-39
Identities = 19/46 (41%), Positives = 25/46 (54%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFE 375
RE++PSIIF+ VQR +LELLNQ+DGF+
Sbjct: 228 RENSPSIIFIDEVDAIATKRFDAQTGADREVQRILLELLNQMDGFD 273
>UNIPROTKB|Q8I1V1 [details] [associations]
symbol:PFD0665c "26S proteasome AAA-ATPase subunit RPT3,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0016887
GO:GO:0006511 HSSP:Q01853 EMBL:AL844503 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK ProtClustDB:PTZ00454
GO:GO:0005838 RefSeq:XP_001351444.1 ProteinModelPortal:Q8I1V1
IntAct:Q8I1V1 MINT:MINT-1573247 PRIDE:Q8I1V1
EnsemblProtists:PFD0665c:mRNA GeneID:812570 KEGG:pfa:PFD0665c
EuPathDB:PlasmoDB:PF3D7_0413600 Uniprot:Q8I1V1
Length = 392
Score = 343 (125.8 bits), Expect = 6.5e-39, Sum P(2) = 6.5e-39
Identities = 64/129 (49%), Positives = 94/129 (72%)
Query: 172 PNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPV 231
P+ VAL S+++ ILP++ D + L+ + + P+ Y +GGLD Q +E+KE +ELP+
Sbjct: 99 PSVSVALHRHSHSIVNILPSESDSSIQLLQITERPNVKYTDLGGLDMQKQEMKEAVELPL 158
Query: 232 KHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSR 291
PEL++ +GI P G+L+YGPPGTGKT+L +AVA+ T+ TFI V GSE VQK++GEG R
Sbjct: 159 TCPELYEKIGIEPPMGILIYGPPGTGKTMLVKAVANETQVTFIGVVGSEFVQKYLGEGPR 218
Query: 292 MVRELFVMA 300
MVR++F +A
Sbjct: 219 MVRDVFRLA 227
Score = 145 (56.1 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 28/46 (60%), Positives = 38/46 (82%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKT+L +AVA+ T+ TFI V GSE VQK++GEG RMVR++F +AR
Sbjct: 183 TGKTMLVKAVANETQVTFIGVVGSEFVQKYLGEGPRMVRDVFRLAR 228
Score = 89 (36.4 bits), Expect = 6.5e-39, Sum P(2) = 6.5e-39
Identities = 19/46 (41%), Positives = 25/46 (54%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFE 375
RE++PSIIF+ VQR +LELLNQ+DGF+
Sbjct: 228 RENSPSIIFIDEVDAIATKRFDAQTGADREVQRILLELLNQMDGFD 273
>CGD|CAL0002261 [details] [associations]
symbol:RPT5 species:5476 "Candida albicans" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0002261 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000086 EMBL:AACQ01000085 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 RefSeq:XP_715432.1 RefSeq:XP_715502.1
ProteinModelPortal:Q5A0X3 STRING:Q5A0X3 GeneID:3642858
GeneID:3642911 KEGG:cal:CaO19.10635 KEGG:cal:CaO19.3123
Uniprot:Q5A0X3
Length = 454
Score = 313 (115.2 bits), Expect = 7.2e-39, Sum P(3) = 7.2e-39
Identities = 60/132 (45%), Positives = 87/132 (65%)
Query: 172 PNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPV 231
PN + + +SY + LP++ D V M V++ P Y +GGLD QI+E+ E + LP+
Sbjct: 161 PNDLIGVNKDSYLVLDTLPSEYDSRVKAMEVDEKPTEDYSDIGGLDKQIEELIEAVVLPM 220
Query: 232 KHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSR 291
K + F LGI PKG L+YGPPGTGKTLLARA A + TF++++ +LVQ FIG+G++
Sbjct: 221 KQADKFKNLGIKPPKGALMYGPPGTGKTLLARACAAQSGATFLKLAAPQLVQMFIGDGAK 280
Query: 292 MVRELFVMASLK 303
+VR+ F +A K
Sbjct: 281 LVRDAFALAKEK 292
Score = 122 (48.0 bits), Expect = 8.1e-10, Sum P(2) = 8.1e-10
Identities = 23/48 (47%), Positives = 37/48 (77%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTLLARA A + TF++++ +LVQ FIG+G+++VR+ F +A+ K
Sbjct: 245 TGKTLLARACAAQSGATFLKLAAPQLVQMFIGDGAKLVRDAFALAKEK 292
Score = 91 (37.1 bits), Expect = 7.2e-39, Sum P(3) = 7.2e-39
Identities = 21/45 (46%), Positives = 24/45 (53%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGF 374
+E AP+IIF+ VQRTMLELLNQLDGF
Sbjct: 290 KEKAPTIIFIDELDAIGTKRFDSDKSGDREVQRTMLELLNQLDGF 334
Score = 38 (18.4 bits), Expect = 7.2e-39, Sum P(3) = 7.2e-39
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 71 DVDEAIKSSEGFKPYYVTKIEELQLIVAEKE 101
D E I +++ PY V + EL + A+KE
Sbjct: 88 DNQEKINNNKQL-PYLVGNVVELLNLDADKE 117
>WB|WBGene00015688 [details] [associations]
symbol:C10G11.8 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0030163 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 HSSP:Q9LCZ4 EMBL:FO080499 PIR:D87802
RefSeq:NP_491811.1 ProteinModelPortal:P91025 SMR:P91025
STRING:P91025 PaxDb:P91025 EnsemblMetazoa:C10G11.8 GeneID:172324
KEGG:cel:CELE_C10G11.8 UCSC:C10G11.8 CTD:172324 WormBase:C10G11.8
InParanoid:P91025 OMA:RGIENAN NextBio:875027 Uniprot:P91025
Length = 438
Score = 333 (122.3 bits), Expect = 8.3e-39, Sum P(2) = 8.3e-39
Identities = 62/113 (54%), Positives = 86/113 (76%)
Query: 188 ILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKG 247
+L +K+D VEK P T++ +GG ++QI+E+KE +ELP+ HPE ++ +GI PKG
Sbjct: 160 VLDDKIDSNAMGHKVEKTPKETFDDIGGCESQIQELKESVELPLTHPEYYEEMGITAPKG 219
Query: 248 VLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
V+LYG PGTGKTLLA+AVA+ T TFIR +GS+LVQK GEG+R+VR++F MA
Sbjct: 220 VILYGEPGTGKTLLAKAVANSTSATFIRATGSDLVQKQSGEGARLVRQIFQMA 272
Score = 147 (56.8 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 29/46 (63%), Positives = 39/46 (84%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLA+AVA+ T TFIR +GS+LVQK GEG+R+VR++F MA+
Sbjct: 228 TGKTLLAKAVANSTSATFIRATGSDLVQKQSGEGARLVRQIFQMAK 273
Score = 98 (39.6 bits), Expect = 8.3e-39, Sum P(2) = 8.3e-39
Identities = 21/47 (44%), Positives = 26/47 (55%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEA 376
+E APSI+F+ VQRT+LELLNQLDGFE+
Sbjct: 273 KEQAPSIVFIDEIDAVGTKRFDTSSRGEQEVQRTLLELLNQLDGFES 319
>POMBASE|SPCC576.10c [details] [associations]
symbol:rpt3 "19S proteasome regulatory subunit Rpt3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005524
"ATP binding" evidence=IC] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0004175 "endopeptidase activity" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC576.10c GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0016887 GO:GO:0006511
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0008540 KO:K03063 OMA:DQTTNVK PIR:T41420 RefSeq:NP_588437.1
ProteinModelPortal:O74894 SMR:O74894 STRING:O74894 PRIDE:O74894
EnsemblFungi:SPCC576.10c.1 GeneID:2539539 KEGG:spo:SPCC576.10c
OrthoDB:EOG46HKKC NextBio:20800700 Uniprot:O74894
Length = 389
Score = 347 (127.2 bits), Expect = 1.7e-38, Sum P(2) = 1.7e-38
Identities = 70/166 (42%), Positives = 103/166 (62%)
Query: 135 VGEVVKPMDKKKVLVKVHPEGKFXXXXXXXXXXXXXTPNCRVALRNESYTLHKILPNKVD 194
+G+ ++ +D+ +V + P+ VAL+ S L ILP + D
Sbjct: 58 IGQFLEAIDQNTAIVGSTTGSNYVVRILSTLDRELLKPSASVALQRHSNALVDILPPEAD 117
Query: 195 PLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPP 254
+S++ ++ PD +Y VGGLD Q +E++E +ELP+ +L+ +GI P+GVLLYGPP
Sbjct: 118 SSISMLRPDERPDVSYADVGGLDVQKQEVREAVELPLTQGDLYRQIGIDPPRGVLLYGPP 177
Query: 255 GTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
GTGKT+L +AVA+ T FIRV GSE VQK++GEG RMVR++F MA
Sbjct: 178 GTGKTMLVKAVANSTAANFIRVVGSEFVQKYLGEGPRMVRDVFRMA 223
Score = 147 (56.8 bits), Expect = 6.5e-12, Sum P(2) = 6.5e-12
Identities = 29/46 (63%), Positives = 37/46 (80%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKT+L +AVA+ T FIRV GSE VQK++GEG RMVR++F MAR
Sbjct: 179 TGKTMLVKAVANSTAANFIRVVGSEFVQKYLGEGPRMVRDVFRMAR 224
Score = 81 (33.6 bits), Expect = 1.7e-38, Sum P(2) = 1.7e-38
Identities = 17/46 (36%), Positives = 24/46 (52%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFE 375
RE+AP+IIF+ VQR ++ELL Q+DGF+
Sbjct: 224 RENAPAIIFIDEIDAIATKRFDAQTGADREVQRILIELLTQMDGFD 269
>DICTYBASE|DDB_G0289003 [details] [associations]
symbol:psmC4 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0006972 "hyperosmotic response"
evidence=IEP] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=ISS] [GO:0005838 "proteasome regulatory
particle" evidence=ISS] [GO:0004175 "endopeptidase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0289003 GO:GO:0005524 GO:GO:0005634
GO:GO:0045335 GO:GO:0006508 GenomeReviews:CM000154_GR GO:GO:0006972
GO:GO:0004175 EMBL:AAFI02000129 GO:GO:0030163 GO:GO:0017111
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03063 OMA:DQTTNVK EMBL:L16578
PIR:JN0611 RefSeq:XP_636422.1 ProteinModelPortal:P34123 SMR:P34123
STRING:P34123 PRIDE:P34123 EnsemblProtists:DDB0191435
GeneID:8626913 KEGG:ddi:DDB_G0289003 ProtClustDB:PTZ00454
GO:GO:0005838 Uniprot:P34123
Length = 403
Score = 341 (125.1 bits), Expect = 2.8e-38, Sum P(2) = 2.8e-38
Identities = 68/166 (40%), Positives = 101/166 (60%)
Query: 135 VGEVVKPMDKKKVLVKVHPEGKFXXXXXXXXXXXXXTPNCRVALRNESYTLHKILPNKVD 194
+G++++ +D +V+ P+ VAL+ S L LP + D
Sbjct: 74 IGQLLEMVDSNTGIVQSTSGSTLCVRILSTIDRELLKPSASVALQRHSNALVDTLPPESD 133
Query: 195 PLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPP 254
+ L+ ++ P +Y +GG D Q +E++E +ELP+ H L+ +GI P+GVLLYGPP
Sbjct: 134 SSIHLLGADEKPSESYSDIGGGDIQKQEMREAVELPLTHHNLYKQIGIDPPRGVLLYGPP 193
Query: 255 GTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
GTGKT+LA+AVAHHT FIRV GSE VQK++GEG R+VR++F +A
Sbjct: 194 GTGKTMLAKAVAHHTSAAFIRVVGSEFVQKYLGEGPRLVRDVFRLA 239
Score = 162 (62.1 bits), Expect = 4.8e-14, Sum P(2) = 4.8e-14
Identities = 30/46 (65%), Positives = 39/46 (84%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKT+LA+AVAHHT FIRV GSE VQK++GEG R+VR++F +AR
Sbjct: 195 TGKTMLAKAVAHHTSAAFIRVVGSEFVQKYLGEGPRLVRDVFRLAR 240
Score = 85 (35.0 bits), Expect = 2.8e-38, Sum P(2) = 2.8e-38
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEAT 377
RE++P+IIF+ VQR ++ELLNQ+DGF+ +
Sbjct: 240 RENSPAIIFIDEIDAIATKRFDAQTGADREVQRILMELLNQMDGFDVS 287
>TAIR|locus:2036099 [details] [associations]
symbol:RPT5B "26S proteasome AAA-ATPase subunit RPT5B"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=ISS] [GO:0010255 "glucose mediated signaling
pathway" evidence=IMP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0009553 "embryo sac
development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0006635 "fatty acid
beta-oxidation" evidence=RCA] [GO:0007010 "cytoskeleton
organization" evidence=RCA] [GO:0009407 "toxin catabolic process"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009555
GO:GO:0000502 GO:GO:0017111 GO:GO:0009553 EMBL:AC000106
GO:GO:0010498 GO:GO:0010255 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03065 HOGENOM:HOG000225143 ProtClustDB:CLSN2679225
EMBL:EU980096 EMBL:AY050423 EMBL:AF412095 EMBL:AY124813
IPI:IPI00549144 PIR:C86223 RefSeq:NP_172384.1 UniGene:At.10379
UniGene:At.42241 ProteinModelPortal:O04019 SMR:O04019 IntAct:O04019
STRING:O04019 PaxDb:O04019 PRIDE:O04019 EnsemblPlants:AT1G09100.1
GeneID:837431 KEGG:ath:AT1G09100 GeneFarm:1498 TAIR:At1g09100
InParanoid:O04019 OMA:VEILEMS PhylomeDB:O04019
Genevestigator:O04019 Uniprot:O04019
Length = 423
Score = 333 (122.3 bits), Expect = 1.2e-37, Sum P(2) = 1.2e-37
Identities = 64/132 (48%), Positives = 90/132 (68%)
Query: 172 PNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPV 231
P V + +SY + LP++ D V M V++ P Y +GGL+ QI+E+ E I LP+
Sbjct: 131 PGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPM 190
Query: 232 KHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSR 291
H E F+ LGI PKGVLLYGPPGTGKTL+ARA A T TF++++G +LVQ FIG+G++
Sbjct: 191 THKEQFEKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAK 250
Query: 292 MVRELFVMASLK 303
+VR+ F++A K
Sbjct: 251 LVRDAFLLAKEK 262
Score = 133 (51.9 bits), Expect = 9.2e-11, Sum P(2) = 9.2e-11
Identities = 24/48 (50%), Positives = 39/48 (81%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL+ARA A T TF++++G +LVQ FIG+G+++VR+ F++A+ K
Sbjct: 215 TGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFLLAKEK 262
Score = 87 (35.7 bits), Expect = 1.2e-37, Sum P(2) = 1.2e-37
Identities = 20/47 (42%), Positives = 24/47 (51%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEA 376
+E +P IIF+ VQRTMLELLNQLDGF +
Sbjct: 260 KEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSS 306
>SGD|S000005643 [details] [associations]
symbol:RPT5 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000005643 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006948 GO:GO:0006511 GO:GO:0017111 EMBL:X90518 EMBL:X94335
GO:GO:0045899 GeneTree:ENSGT00560000077230 GO:GO:0070682
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
GO:GO:0008540 PDB:4B4T PDBsum:4B4T OMA:GALMYGP OrthoDB:EOG40VZZ2
EMBL:X73569 EMBL:Z75025 PIR:S46605 RefSeq:NP_014760.3
RefSeq:NP_014762.3 ProteinModelPortal:P33297 SMR:P33297
DIP:DIP-1590N IntAct:P33297 MINT:MINT-383887 STRING:P33297
PaxDb:P33297 PeptideAtlas:P33297 EnsemblFungi:YOR117W GeneID:854284
GeneID:854286 KEGG:sce:YOR117W KEGG:sce:YOR119C KO:K07178
NextBio:976260 Genevestigator:P33297 GermOnline:YOR117W
Uniprot:P33297
Length = 434
Score = 328 (120.5 bits), Expect = 1.2e-37, Sum P(2) = 1.2e-37
Identities = 64/132 (48%), Positives = 88/132 (66%)
Query: 172 PNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPV 231
PN V + +SY + LP++ D V M V++ P TY VGGLD QI+E+ E I LP+
Sbjct: 142 PNDLVGVNKDSYLILDTLPSEFDSRVKAMEVDEKPTETYSDVGGLDKQIEELVEAIVLPM 201
Query: 232 KHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSR 291
K + F +GI PKG L+YGPPGTGKTLLARA A T TF++++ +LVQ +IGEG++
Sbjct: 202 KRADKFKDMGIRAPKGALMYGPPGTGKTLLARACAAQTNATFLKLAAPQLVQMYIGEGAK 261
Query: 292 MVRELFVMASLK 303
+VR+ F +A K
Sbjct: 262 LVRDAFALAKEK 273
Score = 128 (50.1 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 24/48 (50%), Positives = 37/48 (77%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTLLARA A T TF++++ +LVQ +IGEG+++VR+ F +A+ K
Sbjct: 226 TGKTLLARACAAQTNATFLKLAAPQLVQMYIGEGAKLVRDAFALAKEK 273
Score = 92 (37.4 bits), Expect = 1.2e-37, Sum P(2) = 1.2e-37
Identities = 21/47 (44%), Positives = 25/47 (53%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEA 376
+E AP+IIF+ VQRTMLELLNQLDGF +
Sbjct: 271 KEKAPTIIFIDELDAIGTKRFDSEKSGDREVQRTMLELLNQLDGFSS 317
>TAIR|locus:2079742 [details] [associations]
symbol:RPT5A "regulatory particle triple-A ATPase 5A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0005516 "calmodulin binding" evidence=TAS] [GO:0009553 "embryo
sac development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0000741 "karyogamy"
evidence=RCA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009560 "embryo sac egg cell
differentiation" evidence=RCA] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009555 GO:GO:0000502
GO:GO:0017111 GO:GO:0009553 GO:GO:0010498 EMBL:AC009606
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP EMBL:AF081573 EMBL:AF123394 EMBL:AY062705 EMBL:BT000140
IPI:IPI00517001 RefSeq:NP_187204.1 UniGene:At.11513 HSSP:Q9LCZ4
ProteinModelPortal:Q9SEI2 SMR:Q9SEI2 IntAct:Q9SEI2 STRING:Q9SEI2
PaxDb:Q9SEI2 PRIDE:Q9SEI2 EnsemblPlants:AT3G05530.1 GeneID:819718
KEGG:ath:AT3G05530 GeneFarm:2742 TAIR:At3g05530 InParanoid:Q9SEI2
PhylomeDB:Q9SEI2 ProtClustDB:CLSN2679225 Uniprot:Q9SEI2
Length = 424
Score = 329 (120.9 bits), Expect = 1.5e-37, Sum P(2) = 1.5e-37
Identities = 63/132 (47%), Positives = 89/132 (67%)
Query: 172 PNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPV 231
P V + +SY + LP++ D V M V++ P Y +GGL+ QI+E+ E I LP+
Sbjct: 132 PGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPM 191
Query: 232 KHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSR 291
H E F+ LG+ PKGVLLYGPPGTGKTL+ARA A T TF++++G +LVQ FIG+G++
Sbjct: 192 THKERFEKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAK 251
Query: 292 MVRELFVMASLK 303
+VR+ F +A K
Sbjct: 252 LVRDAFQLAKEK 263
Score = 130 (50.8 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 24/48 (50%), Positives = 38/48 (79%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTL+ARA A T TF++++G +LVQ FIG+G+++VR+ F +A+ K
Sbjct: 216 TGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEK 263
Score = 90 (36.7 bits), Expect = 1.5e-37, Sum P(2) = 1.5e-37
Identities = 21/47 (44%), Positives = 24/47 (51%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEA 376
+E AP IIF+ VQRTMLELLNQLDGF +
Sbjct: 261 KEKAPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSS 307
>DICTYBASE|DDB_G0284415 [details] [associations]
symbol:psmC3 "26S proteasome ATPase 3 subunit"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0284415 GO:GO:0005524 GO:GO:0005634
GO:GO:0045335 GenomeReviews:CM000153_GR GO:GO:0030163 GO:GO:0000502
HSSP:Q01853 GO:GO:0017111 EMBL:AAFI02000064 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
RefSeq:XP_638617.1 ProteinModelPortal:Q54PN7 STRING:Q54PN7
PRIDE:Q54PN7 EnsemblProtists:DDB0232967 GeneID:8624588
KEGG:ddi:DDB_G0284415 InParanoid:Q54PN7 OMA:GALMYGP
ProtClustDB:CLSZ2433711 Uniprot:Q54PN7
Length = 421
Score = 329 (120.9 bits), Expect = 2.4e-37, Sum P(2) = 2.4e-37
Identities = 77/240 (32%), Positives = 122/240 (50%)
Query: 66 EFFTMDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNL--RRLQAQRNELNAKVRMLRX 123
E F M DE + ++ + TK+ + I E + +R++ ++L ++
Sbjct: 25 EIFQMTADEVNRKAKLLENE--TKVLRSEHISKHLEMDSIQKRIKENNDKLQVNTQLPHL 82
Query: 124 XXXXXXXXGSYVGEVVKPMDKKKVLVKVHPEGKFXXXXXXXXXXXXXTPNCRVALRNESY 183
+ +P K V+VK P V + +SY
Sbjct: 83 VANVVEIIDMVLDGETQP--SKCVVVKASTRQTIFLAYPGIVDVDKLRPGDLVGINKDSY 140
Query: 184 TLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIA 243
+ LP + D V M +++ P Y +GGLD QI+E+ E + LP+ H E F+++GI
Sbjct: 141 IILDTLPPEYDSRVKAMEIDEKPTEEYSDIGGLDKQIQELVEAVVLPMTHKERFESIGIK 200
Query: 244 QPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLK 303
PKGVL+YGPPGTGKTLLARA A T T+++++G +LVQ FIG+G+++VR+ F +A K
Sbjct: 201 PPKGVLMYGPPGTGKTLLARACAAQTNSTYLKLAGPQLVQMFIGDGAKLVRDAFALAKEK 260
Score = 137 (53.3 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 40/107 (37%), Positives = 64/107 (59%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARA A T T+++++G +LVQ FIG+G+++VR+ F +A+ KG T F +
Sbjct: 213 TGKTLLARACAAQTNSTYLKLAGPQLVQMFIGDGAKLVRDAFALAKEKGP---TIIFIDE 269
Query: 72 VDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKV 118
+D AI ++ F V+ E+Q + E L +L ++ N KV
Sbjct: 270 LD-AI-GTKRFDSE-VSGDREVQRTMLEL---LNQLDGFSSDANIKV 310
Score = 88 (36.0 bits), Expect = 2.4e-37, Sum P(2) = 2.4e-37
Identities = 20/47 (42%), Positives = 24/47 (51%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEA 376
+E P+IIF+ VQRTMLELLNQLDGF +
Sbjct: 258 KEKGPTIIFIDELDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSS 304
>UNIPROTKB|J3QRR3 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003959 Pfam:PF00004 GO:GO:0005524 EMBL:AC015651
ChiTaRS:PSMC5 HGNC:HGNC:9552 Ensembl:ENST00000584880 Uniprot:J3QRR3
Length = 127
Score = 399 (145.5 bits), Expect = 3.9e-37, P = 3.9e-37
Identities = 76/80 (95%), Positives = 79/80 (98%)
Query: 209 TYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH 268
TYEM+GGLD QIKEIKEVIELPVKHPELF+ALGIAQPKGVLLYGPPGTGKTLLARAVAHH
Sbjct: 2 TYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHH 61
Query: 269 TECTFIRVSGSELVQKFIGE 288
T+CTFIRVSGSELVQKFIGE
Sbjct: 62 TDCTFIRVSGSELVQKFIGE 81
Score = 160 (61.4 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 31/33 (93%), Positives = 33/33 (100%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGE 44
+GKTLLARAVAHHT+CTFIRVSGSELVQKFIGE
Sbjct: 49 TGKTLLARAVAHHTDCTFIRVSGSELVQKFIGE 81
>ASPGD|ASPL0000010049 [details] [associations]
symbol:AN4236 species:162425 "Emericella nidulans"
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:BN001302 GO:GO:0030163
GO:GO:0017111 EMBL:AACD01000068 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP OrthoDB:EOG40VZZ2
RefSeq:XP_661840.1 ProteinModelPortal:Q5B5E4 STRING:Q5B5E4
EnsemblFungi:CADANIAT00004422 GeneID:2873654 KEGG:ani:AN4236.2
Uniprot:Q5B5E4
Length = 465
Score = 317 (116.6 bits), Expect = 1.1e-36, Sum P(2) = 1.1e-36
Identities = 63/132 (47%), Positives = 85/132 (64%)
Query: 172 PNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPV 231
P + + +SY + LP + D V M V++ P Y +GGLD QI+EI E I P+
Sbjct: 172 PGDLIGVNKDSYLILDTLPAEYDNRVKAMEVDEKPTEKYTDIGGLDKQIEEIVEAIVWPM 231
Query: 232 KHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSR 291
K E F LGI PKG L+YGPPGTGKTLLARA A T TF++++G +LVQ FIG+G++
Sbjct: 232 KEAERFKKLGIKAPKGALMYGPPGTGKTLLARACAAETNATFLKLAGPQLVQMFIGDGAK 291
Query: 292 MVRELFVMASLK 303
+VR+ F +A K
Sbjct: 292 LVRDCFALAKEK 303
Score = 137 (53.3 bits), Expect = 8.3e-12, Sum P(2) = 8.3e-12
Identities = 26/51 (50%), Positives = 39/51 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
+GKTLLARA A T TF++++G +LVQ FIG+G+++VR+ F +A+ K S
Sbjct: 256 TGKTLLARACAAETNATFLKLAGPQLVQMFIGDGAKLVRDCFALAKEKAPS 306
Score = 94 (38.1 bits), Expect = 1.1e-36, Sum P(2) = 1.1e-36
Identities = 22/45 (48%), Positives = 24/45 (53%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGF 374
+E APSIIF+ VQRTMLELLNQLDGF
Sbjct: 301 KEKAPSIIFIDELDAVGTKRFDSEKSGDREVQRTMLELLNQLDGF 345
>GENEDB_PFALCIPARUM|PF11_0314 [details] [associations]
symbol:PF11_0314 "26S protease subunit
regulatory subunit 6a, putative" species:5833 "Plasmodium
falciparum" [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
EMBL:AE014186 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 318 (117.0 bits), Expect = 1.7e-36, Sum P(2) = 1.7e-36
Identities = 63/132 (47%), Positives = 87/132 (65%)
Query: 172 PNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPV 231
P V + +SY + LP + D V M V + P Y +GGLD QI+++ E I LP+
Sbjct: 147 PGDLVGVNKDSYLIIDKLPQEYDNRVKAMEVIEKPSEDYSDIGGLDKQIEDLVEAIVLPM 206
Query: 232 KHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSR 291
H E F+ +GI PKGVL++GPPGTGKTLLARA A T TF++++G +LVQ FIG+G++
Sbjct: 207 LHKEKFEKIGIKPPKGVLMHGPPGTGKTLLARACASQTNATFLKLAGPQLVQMFIGDGAK 266
Query: 292 MVRELFVMASLK 303
MVR+ F +A K
Sbjct: 267 MVRDAFNLAKEK 278
Score = 135 (52.6 bits), Expect = 2.4e-11, Sum P(2) = 2.4e-11
Identities = 26/48 (54%), Positives = 38/48 (79%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTLLARA A T TF++++G +LVQ FIG+G++MVR+ F +A+ K
Sbjct: 231 TGKTLLARACASQTNATFLKLAGPQLVQMFIGDGAKMVRDAFNLAKEK 278
Score = 91 (37.1 bits), Expect = 1.7e-36, Sum P(2) = 1.7e-36
Identities = 21/45 (46%), Positives = 24/45 (53%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGF 374
+E AP+IIF+ VQRTMLELLNQLDGF
Sbjct: 276 KEKAPAIIFIDELDAIGTKRFDSELSGDREVQRTMLELLNQLDGF 320
>UNIPROTKB|Q8II60 [details] [associations]
symbol:PF11_0314 "26S protease subunit regulatory subunit
6a, putative" species:36329 "Plasmodium falciparum 3D7" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0004175 "endopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 EMBL:AE014186
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP
ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 318 (117.0 bits), Expect = 1.7e-36, Sum P(2) = 1.7e-36
Identities = 63/132 (47%), Positives = 87/132 (65%)
Query: 172 PNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPV 231
P V + +SY + LP + D V M V + P Y +GGLD QI+++ E I LP+
Sbjct: 147 PGDLVGVNKDSYLIIDKLPQEYDNRVKAMEVIEKPSEDYSDIGGLDKQIEDLVEAIVLPM 206
Query: 232 KHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSR 291
H E F+ +GI PKGVL++GPPGTGKTLLARA A T TF++++G +LVQ FIG+G++
Sbjct: 207 LHKEKFEKIGIKPPKGVLMHGPPGTGKTLLARACASQTNATFLKLAGPQLVQMFIGDGAK 266
Query: 292 MVRELFVMASLK 303
MVR+ F +A K
Sbjct: 267 MVRDAFNLAKEK 278
Score = 135 (52.6 bits), Expect = 2.4e-11, Sum P(2) = 2.4e-11
Identities = 26/48 (54%), Positives = 38/48 (79%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTLLARA A T TF++++G +LVQ FIG+G++MVR+ F +A+ K
Sbjct: 231 TGKTLLARACASQTNATFLKLAGPQLVQMFIGDGAKMVRDAFNLAKEK 278
Score = 91 (37.1 bits), Expect = 1.7e-36, Sum P(2) = 1.7e-36
Identities = 21/45 (46%), Positives = 24/45 (53%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGF 374
+E AP+IIF+ VQRTMLELLNQLDGF
Sbjct: 276 KEKAPAIIFIDELDAIGTKRFDSELSGDREVQRTMLELLNQLDGF 320
>WB|WBGene00004505 [details] [associations]
symbol:rpt-5 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0005737 GO:GO:0002119 GO:GO:0000003 GO:GO:0030163 HSSP:Q01853
GO:GO:0017111 GeneTree:ENSGT00560000077230 EMBL:FO080337
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP PIR:T33155 RefSeq:NP_491672.1 ProteinModelPortal:O76371
SMR:O76371 IntAct:O76371 MINT:MINT-211164 STRING:O76371
PaxDb:O76371 EnsemblMetazoa:F56H1.4.1 EnsemblMetazoa:F56H1.4.2
GeneID:172238 KEGG:cel:CELE_F56H1.4 UCSC:F56H1.4.2 CTD:172238
WormBase:F56H1.4 InParanoid:O76371 NextBio:874627 Uniprot:O76371
Length = 430
Score = 316 (116.3 bits), Expect = 1.7e-36, Sum P(2) = 1.7e-36
Identities = 61/132 (46%), Positives = 89/132 (67%)
Query: 172 PNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPV 231
P V + +SY + + LP + D V M V++ P Y +GG D QI+E+ E + LP+
Sbjct: 138 PGDLVGVNKDSYLILEKLPAEYDSRVKAMEVDERPTEQYSDIGGCDKQIQELIEAVVLPM 197
Query: 232 KHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSR 291
H + F LGI PKGVL+YGPPGTGKT++ARAVA T+ TF++++G +LVQ FIG+G++
Sbjct: 198 THKDRFVNLGIHPPKGVLMYGPPGTGKTMMARAVAAQTKSTFLKLAGPQLVQMFIGDGAK 257
Query: 292 MVRELFVMASLK 303
+VR+ F +A K
Sbjct: 258 LVRDAFALAKEK 269
Score = 135 (52.6 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 24/48 (50%), Positives = 40/48 (83%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKT++ARAVA T+ TF++++G +LVQ FIG+G+++VR+ F +A+ K
Sbjct: 222 TGKTMMARAVAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEK 269
Score = 93 (37.8 bits), Expect = 1.7e-36, Sum P(2) = 1.7e-36
Identities = 21/46 (45%), Positives = 25/46 (54%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFE 375
+E AP+IIF+ VQRTMLELLNQLDGF+
Sbjct: 267 KEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQ 312
>UNIPROTKB|O76371 [details] [associations]
symbol:rpt-5 "Protein RPT-5" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0008340 GO:GO:0009792 GO:GO:0005737
GO:GO:0002119 GO:GO:0000003 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111
GeneTree:ENSGT00560000077230 EMBL:FO080337 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP
PIR:T33155 RefSeq:NP_491672.1 ProteinModelPortal:O76371 SMR:O76371
IntAct:O76371 MINT:MINT-211164 STRING:O76371 PaxDb:O76371
EnsemblMetazoa:F56H1.4.1 EnsemblMetazoa:F56H1.4.2 GeneID:172238
KEGG:cel:CELE_F56H1.4 UCSC:F56H1.4.2 CTD:172238 WormBase:F56H1.4
InParanoid:O76371 NextBio:874627 Uniprot:O76371
Length = 430
Score = 316 (116.3 bits), Expect = 1.7e-36, Sum P(2) = 1.7e-36
Identities = 61/132 (46%), Positives = 89/132 (67%)
Query: 172 PNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPV 231
P V + +SY + + LP + D V M V++ P Y +GG D QI+E+ E + LP+
Sbjct: 138 PGDLVGVNKDSYLILEKLPAEYDSRVKAMEVDERPTEQYSDIGGCDKQIQELIEAVVLPM 197
Query: 232 KHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSR 291
H + F LGI PKGVL+YGPPGTGKT++ARAVA T+ TF++++G +LVQ FIG+G++
Sbjct: 198 THKDRFVNLGIHPPKGVLMYGPPGTGKTMMARAVAAQTKSTFLKLAGPQLVQMFIGDGAK 257
Query: 292 MVRELFVMASLK 303
+VR+ F +A K
Sbjct: 258 LVRDAFALAKEK 269
Score = 135 (52.6 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 24/48 (50%), Positives = 40/48 (83%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKT++ARAVA T+ TF++++G +LVQ FIG+G+++VR+ F +A+ K
Sbjct: 222 TGKTMMARAVAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEK 269
Score = 93 (37.8 bits), Expect = 1.7e-36, Sum P(2) = 1.7e-36
Identities = 21/46 (45%), Positives = 25/46 (54%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFE 375
+E AP+IIF+ VQRTMLELLNQLDGF+
Sbjct: 267 KEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQ 312
>UNIPROTKB|F1MWE0 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 GO:GO:0001824
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:DAAA02041602 IPI:IPI00701790
UniGene:Bt.49089 Ensembl:ENSBTAT00000028983 NextBio:20868523
Uniprot:F1MWE0
Length = 456
Score = 303 (111.7 bits), Expect = 3.4e-35, Sum P(2) = 3.4e-35
Identities = 65/148 (43%), Positives = 91/148 (61%)
Query: 172 PNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEV----- 226
P V + +SY + + LP + D V M V++ P Y +GGLD QI+E++E
Sbjct: 148 PGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQEVREARHLTS 207
Query: 227 -----------IELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIR 275
I LP+ H E F+ LGI PKGVL+YGPPGTGKTLLARA A T+ TF++
Sbjct: 208 LLCLSASLVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLK 267
Query: 276 VSGSELVQKFIGEGSRMVRELFVMASLK 303
++G +LVQ FIG+G+++VR+ F +A K
Sbjct: 268 LAGPQLVQMFIGDGAKLVRDAFALAKEK 295
Score = 138 (53.6 bits), Expect = 3.6e-12, Sum P(2) = 3.6e-12
Identities = 26/51 (50%), Positives = 40/51 (78%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
+GKTLLARA A T+ TF++++G +LVQ FIG+G+++VR+ F +A+ K S
Sbjct: 248 TGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPS 298
Score = 96 (38.9 bits), Expect = 3.4e-35, Sum P(2) = 3.4e-35
Identities = 22/46 (47%), Positives = 25/46 (54%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFE 375
+E APSIIF+ VQRTMLELLNQLDGF+
Sbjct: 293 KEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQ 338
>UNIPROTKB|H0YJS8 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] InterPro:IPR003959 Pfam:PF00004
GO:GO:0005886 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:AL133453 HGNC:HGNC:9553 Ensembl:ENST00000555339 Uniprot:H0YJS8
Length = 195
Score = 352 (129.0 bits), Expect = 1.3e-34, Sum P(2) = 1.3e-34
Identities = 68/126 (53%), Positives = 90/126 (71%)
Query: 172 PNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPV 231
P RVAL + T+ + LP +VDPLV M E + +Y +GGL QI+E++EVIELP+
Sbjct: 55 PGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPL 114
Query: 232 KHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSR 291
+PELF +GI PKG LLYGPPGTGKTLLARAVA +C F++V S +V K+IGE +R
Sbjct: 115 TNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESAR 174
Query: 292 MVRELF 297
++RE+F
Sbjct: 175 LIREMF 180
Score = 134 (52.2 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 25/46 (54%), Positives = 35/46 (76%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKTLLARAVA +C F++V S +V K+IGE +R++RE+F AR
Sbjct: 139 TGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYAR 184
Score = 39 (18.8 bits), Expect = 1.3e-34, Sum P(2) = 1.3e-34
Identities = 7/10 (70%), Positives = 8/10 (80%)
Query: 330 REHAPSIIFM 339
R+H P IIFM
Sbjct: 184 RDHQPCIIFM 193
>UNIPROTKB|F1LZ09 [details] [associations]
symbol:F1LZ09 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR005937 Pfam:PF00004 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 IPI:IPI00780208
Ensembl:ENSRNOT00000039743 Uniprot:F1LZ09
Length = 369
Score = 303 (111.7 bits), Expect = 2.1e-34, Sum P(2) = 2.1e-34
Identities = 60/163 (36%), Positives = 94/163 (57%)
Query: 135 VGEVVKPMDKKKVLVKVHPEGKFXXXXXXXXXXXXXTPNCRVALRNESYTLHKILPNKVD 194
+G+ ++ +D+ V+V PN VAL S TL +LP + +
Sbjct: 38 IGQFLEAVDQNTVIVGSITGSNCYFCILSTIDQELLKPNASVALHKHSNTLVNVLPPEAE 97
Query: 195 PLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPP 254
+ ++ ++ P+ Y +G +D Q +E+ E +ELP+ H EL+ +GI P+GVL+YGPP
Sbjct: 98 SSIMMLTSDQKPNVIYADIGSMDIQKQEVWEAMELPLTHFELYKQIGIDPPRGVLMYGPP 157
Query: 255 GTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 297
G GKT+LA+ VAHH FI V GSE V K++GEG R++ ++F
Sbjct: 158 GCGKTMLAKTVAHHMIAAFIHVVGSEFVHKYLGEGPRIIWDVF 200
Score = 120 (47.3 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 22/41 (53%), Positives = 30/41 (73%)
Query: 13 GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 53
GKT+LA+ VAHH FI V GSE V K++GEG R++ ++F
Sbjct: 160 GKTMLAKTVAHHMIAAFIHVVGSEFVHKYLGEGPRIIWDVF 200
Score = 86 (35.3 bits), Expect = 2.1e-34, Sum P(2) = 2.1e-34
Identities = 18/46 (39%), Positives = 25/46 (54%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFE 375
+E+AP+IIF+ VQR +LELLNQ+DGF+
Sbjct: 204 KENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFD 249
>POMBASE|SPAC3A11.12c [details] [associations]
symbol:rpt5 "19S proteasome regulatory subunit Rpt5
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPAC3A11.12c GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0007346 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 GO:GO:0008540
OMA:GALMYGP EMBL:AB012136 PIR:T11634 RefSeq:XP_001713083.1
ProteinModelPortal:O14126 STRING:O14126 PRIDE:O14126
EnsemblFungi:SPAC3A11.12c.1 GeneID:3361462 KEGG:spo:SPAC3A11.12c
OrthoDB:EOG40VZZ2 NextBio:20811506 Uniprot:O14126
Length = 438
Score = 294 (108.6 bits), Expect = 1.2e-33, Sum P(2) = 1.2e-33
Identities = 57/135 (42%), Positives = 86/135 (63%)
Query: 172 PNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPV 231
P + + +SY + LP++ D V M V++ P Y +GGL QI+E+ E I LP+
Sbjct: 146 PGDLIGVNKDSYLIIDKLPSEYDSRVKAMEVDEKPTERYSDIGGLSKQIEELFEAIVLPM 205
Query: 232 KHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSR 291
+ + F LG+ PKG L++GPPGTGKTLLARA A + TF++++ +LVQ FIG+G++
Sbjct: 206 QQADKFRKLGVKPPKGCLMFGPPGTGKTLLARACAAQSNATFLKLAAPQLVQMFIGDGAK 265
Query: 292 MVRELFVMASLKKLA 306
+VR+ F +A K A
Sbjct: 266 LVRDAFALAKEKSPA 280
Score = 124 (48.7 bits), Expect = 6.9e-10, Sum P(2) = 6.9e-10
Identities = 23/48 (47%), Positives = 37/48 (77%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCK 59
+GKTLLARA A + TF++++ +LVQ FIG+G+++VR+ F +A+ K
Sbjct: 230 TGKTLLARACAAQSNATFLKLAAPQLVQMFIGDGAKLVRDAFALAKEK 277
Score = 89 (36.4 bits), Expect = 1.2e-33, Sum P(2) = 1.2e-33
Identities = 20/47 (42%), Positives = 25/47 (53%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEA 376
+E +P+IIF+ VQRTMLELLNQLDGF +
Sbjct: 275 KEKSPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSS 321
>TAIR|locus:2831844 [details] [associations]
symbol:AtCDC48C "cell division cycle 48C" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005618 "cell wall" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005829 "cytosol" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
EMBL:AL162751 GO:GO:0051301 GO:GO:0005856 GO:GO:0015031
GO:GO:0007049 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0009524 UniGene:At.33291 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK117125 EMBL:AK118571 EMBL:BT006485
IPI:IPI00543476 RefSeq:NP_568114.1 ProteinModelPortal:Q9LZF6
SMR:Q9LZF6 IntAct:Q9LZF6 STRING:Q9LZF6 PRIDE:Q9LZF6
EnsemblPlants:AT5G03340.1 GeneID:831870 KEGG:ath:AT5G03340
GeneFarm:1899 TAIR:At5g03340 InParanoid:Q9LZF6 OMA:AYRPIHK
PhylomeDB:Q9LZF6 Genevestigator:Q9LZF6 GermOnline:AT5G03340
Uniprot:Q9LZF6
Length = 810
Score = 264 (98.0 bits), Expect = 4.1e-32, Sum P(3) = 4.1e-32
Identities = 53/122 (43%), Positives = 79/122 (64%)
Query: 176 VALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPE 235
+A+ NE + H L N +P V +VP+ ++E +GGL+N +E++E ++ PV+HPE
Sbjct: 448 MAVSNEHF--HTALGNS-NPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPE 504
Query: 236 LFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRE 295
F+ G++ KGVL YGPPG GKTLLA+A+A+ + FI V G EL+ + GE VRE
Sbjct: 505 KFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRE 564
Query: 296 LF 297
+F
Sbjct: 565 IF 566
Score = 255 (94.8 bits), Expect = 7.2e-26, Sum P(3) = 7.2e-26
Identities = 44/95 (46%), Positives = 70/95 (73%)
Query: 203 EKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 262
E++ + Y+ VGG+ Q+ +I+E++ELP++HP+LF ++G+ PKG+LLYGPPG+GKTL+A
Sbjct: 199 ERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIA 258
Query: 263 RAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 297
RAVA+ T F ++G E++ K GE +R+ F
Sbjct: 259 RAVANETGAFFFCINGPEIMSKLAGESESNLRKAF 293
Score = 93 (37.8 bits), Expect = 4.1e-32, Sum P(3) = 4.1e-32
Identities = 19/42 (45%), Positives = 27/42 (64%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 53
SGKTL+ARAVA+ T F ++G E++ K GE +R+ F
Sbjct: 252 SGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAF 293
Score = 52 (23.4 bits), Expect = 4.1e-32, Sum P(3) = 4.1e-32
Identities = 11/49 (22%), Positives = 18/49 (36%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEATK 378
R+ AP ++F R + +LL ++DG A K
Sbjct: 570 RQSAPCVLFFDELDSIATQRGNSAGDAGGAADRVLNQLLTEMDGMNAKK 618
Score = 42 (19.8 bits), Expect = 7.8e-27, Sum P(3) = 7.8e-27
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 72 VDEAIKSSEGFKPYYVTKIEELQL 95
VDEAI + T +E+LQL
Sbjct: 32 VDEAINDDNSVVSLHPTTMEKLQL 55
Score = 38 (18.4 bits), Expect = 2.0e-26, Sum P(3) = 2.0e-26
Identities = 10/43 (23%), Positives = 21/43 (48%)
Query: 72 VDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRL--QAQRN 112
+ A+ + G + + E + + E E NLR+ +A++N
Sbjct: 257 IARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN 299
>UNIPROTKB|F1MFP1 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:DAAA02044760 EMBL:DAAA02044756 EMBL:DAAA02044757
EMBL:DAAA02044758 EMBL:DAAA02044759 IPI:IPI00912761
Ensembl:ENSBTAT00000000136 Uniprot:F1MFP1
Length = 771
Score = 284 (105.0 bits), Expect = 2.5e-26, Sum P(2) = 2.5e-26
Identities = 51/95 (53%), Positives = 73/95 (76%)
Query: 209 TYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH 268
TY+M+GGL++Q+KEI+E+IELP+K PELF + GI P+GVLLYGPPGTGKT++ARAVA+
Sbjct: 342 TYDMIGGLNSQLKEIREIIELPLKQPELFKSYGIPPPRGVLLYGPPGTGKTMIARAVANE 401
Query: 269 TECTFIRVSGSELVQKFIGEGSRMVRELFVMASLK 303
++G E++ KF GE +R++F A+L+
Sbjct: 402 VGAYVSVINGPEIISKFYGETEARLRQIFAEATLR 436
Score = 258 (95.9 bits), Expect = 9.4e-31, Sum P(3) = 9.4e-31
Identities = 46/107 (42%), Positives = 71/107 (66%)
Query: 191 NKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLL 250
N + P + VP+ ++ +GGL+N ++K+ +E P+KHPE F +GI PKGVLL
Sbjct: 598 NDIRPSAMREVAVDVPNVSWSDIGGLENVKLKLKQAVEWPLKHPESFTQMGIQPPKGVLL 657
Query: 251 YGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 297
YGPPG KT++A+A+A+ + F+ + G EL+ K++GE R VRE+F
Sbjct: 658 YGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREIF 704
Score = 89 (36.4 bits), Expect = 9.4e-31, Sum P(3) = 9.4e-31
Identities = 22/70 (31%), Positives = 36/70 (51%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKT++ARAVA+ ++G E++ KF GE +R++F A + S F +
Sbjct: 389 TGKTMIARAVANEVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSI---IFIDE 445
Query: 72 VDEAIKSSEG 81
+D EG
Sbjct: 446 LDALCPKREG 455
Score = 48 (22.0 bits), Expect = 9.4e-31, Sum P(3) = 9.4e-31
Identities = 14/49 (28%), Positives = 18/49 (36%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEATK 378
R APSIIF R + +LL ++DG E K
Sbjct: 708 RAVAPSIIFFDELDALAVERGSSSGAGNVA-DRVLAQLLTEMDGIEQLK 755
>TAIR|locus:2101933 [details] [associations]
symbol:AtCDC48B "AT3G53230" species:3702 "Arabidopsis
thaliana" [GO:0005524 "ATP binding" evidence=ISS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0045732 "positive
regulation of protein catabolic process" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0005794 GO:GO:0046686 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005654 GO:GO:0005730 GO:GO:0051301
GO:GO:0005856 GO:GO:0015031 GO:GO:0007049 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0045732 GO:GO:0009524 EMBL:AL132958 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK228801 IPI:IPI00520856 PIR:T46169
RefSeq:NP_190891.1 UniGene:At.23168 ProteinModelPortal:Q9SCN8
SMR:Q9SCN8 STRING:Q9SCN8 PaxDb:Q9SCN8 PRIDE:Q9SCN8
EnsemblPlants:AT3G53230.1 GeneID:824489 KEGG:ath:AT3G53230
GeneFarm:1909 TAIR:At3g53230 InParanoid:Q9SCN8 OMA:DIRRYEE
PhylomeDB:Q9SCN8 Genevestigator:Q9SCN8 GermOnline:AT3G53230
Uniprot:Q9SCN8
Length = 815
Score = 255 (94.8 bits), Expect = 1.9e-23, Sum P(2) = 1.9e-23
Identities = 44/95 (46%), Positives = 70/95 (73%)
Query: 203 EKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 262
E++ + Y+ VGG+ Q+ +I+E++ELP++HP+LF ++G+ PKG+LLYGPPG+GKTL+A
Sbjct: 200 ERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIA 259
Query: 263 RAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 297
RAVA+ T F ++G E++ K GE +R+ F
Sbjct: 260 RAVANETGAFFFCINGPEIMSKLAGESESNLRKAF 294
Score = 252 (93.8 bits), Expect = 1.0e-30, Sum P(3) = 1.0e-30
Identities = 45/96 (46%), Positives = 68/96 (70%)
Query: 202 VEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLL 261
V +VP+ ++E +GGL+N +E++E ++ PV+HPE F+ G++ KGVL YGPPG GKTLL
Sbjct: 472 VVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 531
Query: 262 ARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 297
A+A+A+ + FI + G EL+ + GE VRE+F
Sbjct: 532 AKAIANECQANFISIKGPELLTMWFGESEANVREIF 567
Score = 93 (37.8 bits), Expect = 1.0e-30, Sum P(3) = 1.0e-30
Identities = 19/42 (45%), Positives = 27/42 (64%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 53
SGKTL+ARAVA+ T F ++G E++ K GE +R+ F
Sbjct: 253 SGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAF 294
Score = 51 (23.0 bits), Expect = 1.0e-30, Sum P(3) = 1.0e-30
Identities = 11/49 (22%), Positives = 18/49 (36%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEATK 378
R+ AP ++F R + +LL ++DG A K
Sbjct: 571 RQSAPCVLFFDELDSIATQRGNSVGDAGGAADRVLNQLLTEMDGMNAKK 619
Score = 38 (18.4 bits), Expect = 5.1e-25, Sum P(3) = 5.1e-25
Identities = 10/43 (23%), Positives = 21/43 (48%)
Query: 72 VDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRL--QAQRN 112
+ A+ + G + + E + + E E NLR+ +A++N
Sbjct: 258 IARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN 300
>UNIPROTKB|E9PMD8 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0001824 "blastocyst development" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] InterPro:IPR003959
Pfam:PF00004 GO:GO:0005524 GO:GO:0001824 EMBL:AC090559
HGNC:HGNC:9549 ChiTaRS:PSMC3 IPI:IPI00978171 SMR:E9PMD8
Ensembl:ENST00000530651 Ensembl:ENST00000530887 Uniprot:E9PMD8
Length = 260
Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 65/132 (49%), Positives = 90/132 (68%)
Query: 172 PNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPV 231
P V + +SY + + LP + D V M V++ P Y +GGLD QI+E+ E I LP+
Sbjct: 112 PGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPM 171
Query: 232 KHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSR 291
H E F+ LGI PKGVL+YGPPGTGKTLLARA A T+ TF++++G +LVQ FIG+G++
Sbjct: 172 NHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAK 231
Query: 292 MVRELFVMASLK 303
+VR+ F +A K
Sbjct: 232 LVRDAFALAKEK 243
Score = 138 (53.6 bits), Expect = 5.6e-07, P = 5.6e-07
Identities = 26/51 (50%), Positives = 40/51 (78%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
+GKTLLARA A T+ TF++++G +LVQ FIG+G+++VR+ F +A+ K S
Sbjct: 196 TGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPS 246
>UNIPROTKB|E9PKD5 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 EMBL:AC090559 HGNC:HGNC:9549 ChiTaRS:PSMC3
IPI:IPI00978735 ProteinModelPortal:E9PKD5 SMR:E9PKD5 PRIDE:E9PKD5
Ensembl:ENST00000524447 ArrayExpress:E9PKD5 Bgee:E9PKD5
Uniprot:E9PKD5
Length = 294
Score = 256 (95.2 bits), Expect = 1.6e-30, Sum P(2) = 1.6e-30
Identities = 49/89 (55%), Positives = 68/89 (76%)
Query: 217 DNQIK--EIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFI 274
D+++K E+ E I LP+ H E F+ LGI PKGVL+YGPPGTGKTLLARA A T+ TF+
Sbjct: 134 DSRVKAMELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFL 193
Query: 275 RVSGSELVQKFIGEGSRMVRELFVMASLK 303
+++G +LVQ FIG+G+++VR+ F +A K
Sbjct: 194 KLAGPQLVQMFIGDGAKLVRDAFALAKEK 222
Score = 138 (53.6 bits), Expect = 5.9e-13, Sum P(2) = 5.9e-13
Identities = 26/51 (50%), Positives = 40/51 (78%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
+GKTLLARA A T+ TF++++G +LVQ FIG+G+++VR+ F +A+ K S
Sbjct: 175 TGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPS 225
Score = 96 (38.9 bits), Expect = 1.6e-30, Sum P(2) = 1.6e-30
Identities = 22/46 (47%), Positives = 25/46 (54%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFE 375
+E APSIIF+ VQRTMLELLNQLDGF+
Sbjct: 220 KEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQ 265
>UNIPROTKB|F1RQN5 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:FP102941 EMBL:CU463172 Ensembl:ENSSSCT00000009950
Uniprot:F1RQN5
Length = 778
Score = 286 (105.7 bits), Expect = 1.6e-26, Sum P(2) = 1.6e-26
Identities = 51/95 (53%), Positives = 74/95 (77%)
Query: 209 TYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH 268
TY+M+GGL++Q+KEI+E+IELP+K PELF + GI+ P+GVLLYGPPGTGKT++ARAVA+
Sbjct: 345 TYDMIGGLNSQLKEIREIIELPLKQPELFKSYGISPPRGVLLYGPPGTGKTMIARAVANE 404
Query: 269 TECTFIRVSGSELVQKFIGEGSRMVRELFVMASLK 303
++G E++ KF GE +R++F A+L+
Sbjct: 405 VGAYVSVINGPEIISKFYGETEARLRQIFAEATLR 439
Score = 256 (95.2 bits), Expect = 1.6e-30, Sum P(3) = 1.6e-30
Identities = 46/107 (42%), Positives = 71/107 (66%)
Query: 191 NKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLL 250
N + P + VP+ ++ +GGL+N ++K+ +E P+KHPE F +GI PKGVLL
Sbjct: 601 NDIRPSAMREVAIDVPNVSWSDIGGLENIKLKLKQAVEWPLKHPESFTQMGIQPPKGVLL 660
Query: 251 YGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 297
YGPPG KT++A+A+A+ + F+ + G EL+ K++GE R VRE+F
Sbjct: 661 YGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREIF 707
Score = 89 (36.4 bits), Expect = 1.6e-30, Sum P(3) = 1.6e-30
Identities = 22/70 (31%), Positives = 36/70 (51%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKT++ARAVA+ ++G E++ KF GE +R++F A + S F +
Sbjct: 392 TGKTMIARAVANEVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSI---IFIDE 448
Query: 72 VDEAIKSSEG 81
+D EG
Sbjct: 449 LDALCPKREG 458
Score = 48 (22.0 bits), Expect = 1.6e-30, Sum P(3) = 1.6e-30
Identities = 14/49 (28%), Positives = 18/49 (36%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEATK 378
R APSIIF R + +LL ++DG E K
Sbjct: 711 RAVAPSIIFFDELDALAVERGSSSGAGNVA-DRVLAQLLTEMDGIEQLK 758
>TAIR|locus:2085064 [details] [associations]
symbol:CDC48 "cell division cycle 48" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0022626
"cytosolic ribosome" evidence=IDA] [GO:0005618 "cell wall"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0046686 "response to cadmium ion" evidence=IEP;RCA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005819
"spindle" evidence=IDA] [GO:0009524 "phragmoplast" evidence=IDA]
[GO:0009846 "pollen germination" evidence=IMP] [GO:0009860 "pollen
tube growth" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0048046 "apoplast" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0006486 "protein
glycosylation" evidence=RCA] [GO:0016310 "phosphorylation"
evidence=RCA] [GO:0042742 "defense response to bacterium"
evidence=RCA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005886 GO:GO:0009506
GO:GO:0005524 GO:GO:0005794 GO:GO:0005618 GO:GO:0046686
GO:GO:0005635 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AC015985
GO:GO:0005730 GO:GO:0051301 GO:GO:0005819 GO:GO:0048046
GO:GO:0015031 GO:GO:0007049 GO:GO:0009860 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0022626 GO:GO:0009846 GO:GO:0009524 EMBL:U37587 EMBL:AY065076
EMBL:AY094434 IPI:IPI00547533 PIR:S60112 RefSeq:NP_187595.1
UniGene:At.21739 UniGene:At.33291 ProteinModelPortal:P54609
SMR:P54609 IntAct:P54609 STRING:P54609 PaxDb:P54609 PRIDE:P54609
ProMEX:P54609 EnsemblPlants:AT3G09840.1 GeneID:820142
KEGG:ath:AT3G09840 GeneFarm:1893 TAIR:At3g09840
HOGENOM:HOG000223224 InParanoid:P54609 KO:K13525 OMA:QIANECH
PhylomeDB:P54609 ProtClustDB:CLSN2684913 Genevestigator:P54609
GermOnline:AT3G09840 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
Uniprot:P54609
Length = 809
Score = 259 (96.2 bits), Expect = 1.9e-30, Sum P(3) = 1.9e-30
Identities = 52/122 (42%), Positives = 78/122 (63%)
Query: 176 VALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPE 235
+A+ NE + H L N +P V +VP+ ++ +GGL+N +E++E ++ PV+HPE
Sbjct: 448 MAVTNEHF--HTALGNS-NPSALRETVVEVPNVSWNDIGGLENVKRELQETVQYPVEHPE 504
Query: 236 LFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRE 295
F+ G++ KGVL YGPPG GKTLLA+A+A+ + FI V G EL+ + GE VRE
Sbjct: 505 KFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRE 564
Query: 296 LF 297
+F
Sbjct: 565 IF 566
Score = 259 (96.2 bits), Expect = 1.2e-24, Sum P(3) = 1.2e-24
Identities = 45/95 (47%), Positives = 70/95 (73%)
Query: 203 EKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 262
E++ D Y+ VGG+ Q+ +I+E++ELP++HP+LF ++G+ PKG+LLYGPPG+GKTL+A
Sbjct: 199 ERLDDVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIA 258
Query: 263 RAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 297
RAVA+ T F ++G E++ K GE +R+ F
Sbjct: 259 RAVANETGAFFFCINGPEIMSKLAGESESNLRKAF 293
Score = 93 (37.8 bits), Expect = 1.9e-30, Sum P(3) = 1.9e-30
Identities = 19/42 (45%), Positives = 27/42 (64%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 53
SGKTL+ARAVA+ T F ++G E++ K GE +R+ F
Sbjct: 252 SGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAF 293
Score = 41 (19.5 bits), Expect = 1.9e-30, Sum P(3) = 1.9e-30
Identities = 11/50 (22%), Positives = 18/50 (36%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXX-XVQRTMLELLNQLDGFEATK 378
R+ AP ++F R + +LL ++DG A K
Sbjct: 570 RQSAPCVLFFDELDSIATQRGGGSGGDGGGAADRVLNQLLTEMDGMNAKK 619
Score = 38 (18.4 bits), Expect = 9.4e-25, Sum P(3) = 9.4e-25
Identities = 10/43 (23%), Positives = 21/43 (48%)
Query: 72 VDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRL--QAQRN 112
+ A+ + G + + E + + E E NLR+ +A++N
Sbjct: 257 IARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN 299
Score = 37 (18.1 bits), Expect = 1.2e-24, Sum P(3) = 1.2e-24
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 72 VDEAIKSSEGFKPYYVTKIEELQL 95
VDEAI + +E+LQL
Sbjct: 32 VDEAINDDNSVVSLHPATMEKLQL 55
>UNIPROTKB|E9PN50 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003959 Pfam:PF00004 GO:GO:0005524 EMBL:AC090559
HGNC:HGNC:9549 ChiTaRS:PSMC3 IPI:IPI00979951
ProteinModelPortal:E9PN50 SMR:E9PN50 Ensembl:ENST00000531051
ArrayExpress:E9PN50 Bgee:E9PN50 Uniprot:E9PN50
Length = 239
Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
Identities = 64/129 (49%), Positives = 89/129 (68%)
Query: 175 RVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHP 234
R + +SY + + LP + D V M V++ P Y +GGLD QI+E+ E I LP+ H
Sbjct: 94 RQGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHK 153
Query: 235 ELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVR 294
E F+ LGI PKGVL+YGPPGTGKTLLARA A T+ TF++++G +LVQ FIG+G+++VR
Sbjct: 154 EKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVR 213
Query: 295 ELFVMASLK 303
+ F +A K
Sbjct: 214 DAFALAKEK 222
Score = 138 (53.6 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 26/51 (50%), Positives = 40/51 (78%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
+GKTLLARA A T+ TF++++G +LVQ FIG+G+++VR+ F +A+ K S
Sbjct: 175 TGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPS 225
>MGI|MGI:1927170 [details] [associations]
symbol:Spata5 "spermatogenesis associated 5" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 MGI:MGI:1927170 GO:GO:0007275
GO:GO:0005739 GO:GO:0005524 GO:GO:0030154 GO:GO:0007283
eggNOG:COG0464 HOGENOM:HOG000223225 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 HSSP:Q9WZ49
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073
CTD:166378 HOVERGEN:HBG108504 OMA:NDIRPSA OrthoDB:EOG43FGWF
EMBL:AF049099 EMBL:AK011111 EMBL:AK144998 EMBL:AL669927
EMBL:AL627074 EMBL:AL645968 IPI:IPI00649667 RefSeq:NP_001156983.1
RefSeq:NP_067318.2 UniGene:Mm.172679 ProteinModelPortal:Q3UMC0
SMR:Q3UMC0 PhosphoSite:Q3UMC0 PaxDb:Q3UMC0 PRIDE:Q3UMC0
Ensembl:ENSMUST00000029277 Ensembl:ENSMUST00000108112 GeneID:57815
KEGG:mmu:57815 UCSC:uc008pau.2 InParanoid:Q3UMC0 NextBio:314006
Bgee:Q3UMC0 Genevestigator:Q3UMC0 Uniprot:Q3UMC0
Length = 893
Score = 276 (102.2 bits), Expect = 3.1e-25, Sum P(2) = 3.1e-25
Identities = 58/127 (45%), Positives = 84/127 (66%)
Query: 209 TYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH 268
TY+M+GGL++Q+K I+E+IELP+K PELF + GI P+G+LLYGPPGTGKT++ARAVA+
Sbjct: 351 TYDMIGGLNSQLKAIREIIELPLKQPELFKSYGIPAPRGLLLYGPPGTGKTMIARAVANE 410
Query: 269 TECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCN 328
++G E++ KF GE +R++F A+L+ HP S++ I +C
Sbjct: 411 VGAYVSVINGPEIISKFYGETEARLRQIFAEATLR------HP----SIIFIDELDALCP 460
Query: 329 FREHAPS 335
RE A S
Sbjct: 461 KREGAQS 467
Score = 256 (95.2 bits), Expect = 3.2e-30, Sum P(3) = 3.2e-30
Identities = 51/128 (39%), Positives = 81/128 (63%)
Query: 172 PNCRVALRNESYTLHKILP--NKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIEL 229
P+ +VA TL+ L N + P + VP+ ++ +GGL+N ++K+ +E
Sbjct: 587 PDSKVA-GMVKITLNDFLQGMNDIRPSAMREVAIDVPNVSWSDIGGLENIKLKLKQAVEW 645
Query: 230 PVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEG 289
P+KHP+ F+ +GI PKGVLLYGPPG KT++A+A+A+ + F+ + G EL+ K++GE
Sbjct: 646 PLKHPKSFNRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGES 705
Query: 290 SRMVRELF 297
R VRE+F
Sbjct: 706 ERAVREIF 713
Score = 89 (36.4 bits), Expect = 3.2e-30, Sum P(3) = 3.2e-30
Identities = 22/70 (31%), Positives = 36/70 (51%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKT++ARAVA+ ++G E++ KF GE +R++F A + S F +
Sbjct: 398 TGKTMIARAVANEVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSI---IFIDE 454
Query: 72 VDEAIKSSEG 81
+D EG
Sbjct: 455 LDALCPKREG 464
Score = 48 (22.0 bits), Expect = 3.2e-30, Sum P(3) = 3.2e-30
Identities = 14/49 (28%), Positives = 18/49 (36%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEATK 378
R APSIIF R + +LL ++DG E K
Sbjct: 717 RAVAPSIIFFDELDALAVERGSSSGAGNVA-DRVLAQLLTEMDGIEQLK 764
>RGD|1310478 [details] [associations]
symbol:Spata5 "spermatogenesis associated 5" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
RGD:1310478 GO:GO:0005524 GO:GO:0005737 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 EMBL:CH473961 SMART:SM01073
CTD:166378 OrthoDB:EOG43FGWF EMBL:AC116183 IPI:IPI00373191
RefSeq:NP_001102019.1 UniGene:Rn.116828 Ensembl:ENSRNOT00000023584
GeneID:361935 KEGG:rno:361935 UCSC:RGD:1310478 NextBio:678104
Uniprot:D4A6T1
Length = 838
Score = 276 (102.2 bits), Expect = 2.5e-25, Sum P(2) = 2.5e-25
Identities = 58/127 (45%), Positives = 84/127 (66%)
Query: 209 TYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH 268
TY+M+GGL++Q+K I+E+IELP+K PELF + GI P+G+LLYGPPGTGKT++ARAVA+
Sbjct: 351 TYDMIGGLNSQLKAIREIIELPLKQPELFKSYGIPAPRGLLLYGPPGTGKTMIARAVANE 410
Query: 269 TECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLFWSLLTILTNTIVCN 328
++G E++ KF GE +R++F A+L+ HP S++ I +C
Sbjct: 411 VGAYVSVINGPEIISKFYGETEARLRQIFAEATLR------HP----SIIFIDELDALCP 460
Query: 329 FREHAPS 335
RE A S
Sbjct: 461 KREGAQS 467
Score = 254 (94.5 bits), Expect = 3.9e-30, Sum P(3) = 3.9e-30
Identities = 51/128 (39%), Positives = 80/128 (62%)
Query: 172 PNCRVALRNESYTLHKILP--NKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIEL 229
P+ +VA TL+ L N + P + VP+ ++ +GGL+N ++K+ +E
Sbjct: 587 PDSKVA-GMVKITLNDFLQGMNDIRPSAMREVAIDVPNVSWSDIGGLENIKLKLKQAVEW 645
Query: 230 PVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEG 289
P+KHP+ F +GI PKGVLLYGPPG KT++A+A+A+ + F+ + G EL+ K++GE
Sbjct: 646 PLKHPKSFSRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGES 705
Query: 290 SRMVRELF 297
R VRE+F
Sbjct: 706 ERAVREVF 713
Score = 89 (36.4 bits), Expect = 3.9e-30, Sum P(3) = 3.9e-30
Identities = 22/70 (31%), Positives = 36/70 (51%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKT++ARAVA+ ++G E++ KF GE +R++F A + S F +
Sbjct: 398 TGKTMIARAVANEVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSI---IFIDE 454
Query: 72 VDEAIKSSEG 81
+D EG
Sbjct: 455 LDALCPKREG 464
Score = 48 (22.0 bits), Expect = 3.9e-30, Sum P(3) = 3.9e-30
Identities = 14/49 (28%), Positives = 18/49 (36%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEATK 378
R APSIIF R + +LL ++DG E K
Sbjct: 717 RAVAPSIIFFDELDALAVERGSSSGAGNVA-DRVLAQLLTEMDGIEQLK 764
>UNIPROTKB|E2RC37 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 CTD:166378 OMA:NDIRPSA
EMBL:AAEX03011797 RefSeq:XP_540960.2 ProteinModelPortal:E2RC37
Ensembl:ENSCAFT00000006393 GeneID:483840 KEGG:cfa:483840
Uniprot:E2RC37
Length = 893
Score = 277 (102.6 bits), Expect = 4.9e-25, Sum P(2) = 4.9e-25
Identities = 50/95 (52%), Positives = 71/95 (74%)
Query: 209 TYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH 268
TY+M+GGL +Q+K I+E+IELP+K PELF + GI P+GVLLYGPPGTGKT++ARAVA+
Sbjct: 351 TYDMIGGLSSQLKAIREIIELPLKQPELFKSYGIPPPRGVLLYGPPGTGKTMIARAVANE 410
Query: 269 TECTFIRVSGSELVQKFIGEGSRMVRELFVMASLK 303
++G E++ KF GE +R++F A+L+
Sbjct: 411 VGAYVSVINGPEIISKFYGETEARLRQIFAEATLR 445
Score = 255 (94.8 bits), Expect = 8.5e-30, Sum P(3) = 8.5e-30
Identities = 49/116 (42%), Positives = 75/116 (64%)
Query: 184 TLHKILP--NKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALG 241
TL+ L N + P + VP+ ++ +GGL+N ++K+ +E P+KHPE F +G
Sbjct: 598 TLNDFLQGMNDIRPSAMREVAIDVPNVSWSDIGGLENIKLKLKQAVEWPLKHPESFIRMG 657
Query: 242 IAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 297
I PKGVLLYGPPG KT++A+A+A+ + F+ + G EL+ K++GE R VRE+F
Sbjct: 658 IQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREIF 713
Score = 89 (36.4 bits), Expect = 8.5e-30, Sum P(3) = 8.5e-30
Identities = 22/70 (31%), Positives = 36/70 (51%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKT++ARAVA+ ++G E++ KF GE +R++F A + S F +
Sbjct: 398 TGKTMIARAVANEVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSI---IFIDE 454
Query: 72 VDEAIKSSEG 81
+D EG
Sbjct: 455 LDALCPKREG 464
Score = 45 (20.9 bits), Expect = 8.5e-30, Sum P(3) = 8.5e-30
Identities = 13/49 (26%), Positives = 18/49 (36%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEATK 378
R +PSIIF R + +LL ++DG E K
Sbjct: 717 RAVSPSIIFFDELDALAIERGSSSGAGNVA-DRVLAQLLTEMDGIEQLK 764
>DICTYBASE|DDB_G0288065 [details] [associations]
symbol:cdcD "CDC48 family AAA ATPase" species:44689
"Dictyostelium discoideum" [GO:0005615 "extracellular space"
evidence=IDA] [GO:0045335 "phagocytic vesicle" evidence=IDA]
[GO:0009617 "response to bacterium" evidence=IEP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0007049 "cell
cycle" evidence=ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0051301 "cell division" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
dictyBase:DDB_G0288065 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005615 GO:GO:0045335 GO:GO:0009617 GO:GO:0051301
GenomeReviews:CM000154_GR GO:GO:0016887 GO:GO:0007049 GO:GO:0030433
HSSP:Q01853 eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 EMBL:AAFI02000109 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
ProtClustDB:CLSZ2429060 EMBL:U83085 RefSeq:XP_636910.1
ProteinModelPortal:P90532 SMR:P90532 STRING:P90532 PRIDE:P90532
EnsemblProtists:DDB0191154 GeneID:8626465 KEGG:ddi:DDB_G0288065
InParanoid:P90532 Uniprot:P90532
Length = 793
Score = 248 (92.4 bits), Expect = 3.4e-29, Sum P(3) = 3.4e-29
Identities = 46/96 (47%), Positives = 65/96 (67%)
Query: 202 VEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLL 261
V +VP +T+E +GGL+ +E++E ++ PV+HPE F G+ KGVL YGPPG GKTLL
Sbjct: 466 VVEVPTTTWEDIGGLEGVKRELRETVQYPVEHPEKFRKFGMQPSKGVLFYGPPGCGKTLL 525
Query: 262 ARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 297
A+A+A+ + FI + G EL+ + GE VRELF
Sbjct: 526 AKAIANECQANFISIKGPELLTMWFGESEANVRELF 561
Score = 245 (91.3 bits), Expect = 7.5e-21, Sum P(2) = 7.5e-21
Identities = 41/95 (43%), Positives = 68/95 (71%)
Query: 203 EKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 262
+++ + Y+ +GG+ Q+ +I+E++ELP++HP+LF +G+ PKG+LLYGPPG GKT++A
Sbjct: 194 DRLDEVGYDDIGGVRKQLGQIRELVELPLRHPQLFKNIGVKPPKGILLYGPPGCGKTMIA 253
Query: 263 RAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 297
RAVA+ T F ++G E++ K GE +R+ F
Sbjct: 254 RAVANETGAFFFLINGPEIMSKLAGESESNLRKAF 288
Score = 88 (36.0 bits), Expect = 3.4e-29, Sum P(3) = 3.4e-29
Identities = 17/41 (41%), Positives = 26/41 (63%)
Query: 13 GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 53
GKT++ARAVA+ T F ++G E++ K GE +R+ F
Sbjct: 248 GKTMIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAF 288
Score = 45 (20.9 bits), Expect = 3.4e-29, Sum P(3) = 3.4e-29
Identities = 10/49 (20%), Positives = 18/49 (36%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEATK 378
R+ AP ++F R + ++L ++DG A K
Sbjct: 565 RQAAPCVLFFDELDSIARSRGSSQGDAGGAGDRVINQILTEMDGMNAKK 613
Score = 40 (19.1 bits), Expect = 3.1e-24, Sum P(3) = 3.1e-24
Identities = 12/46 (26%), Positives = 23/46 (50%)
Query: 69 TMDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRL--QAQRN 112
TM + A+ + G + + E + + E E NLR+ +A++N
Sbjct: 250 TM-IARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKN 294
>ZFIN|ZDB-GENE-030131-5408 [details] [associations]
symbol:vcp "valosin containing protein"
species:7955 "Danio rerio" [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA;ISS] [GO:0016567 "protein
ubiquitination" evidence=ISS] [GO:0035861 "site of double-strand
break" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0009790 "embryo development" evidence=IMP]
[GO:2000058 "regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0008289 "lipid binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359
ZFIN:ZDB-GENE-030131-5408 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0006810 EMBL:CR318632 GO:GO:0016567 GO:GO:0007049
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK GeneTree:ENSGT00700000104534
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:AB093594 EMBL:AY576993 EMBL:BC050488 EMBL:BC067384
IPI:IPI00505091 RefSeq:NP_958889.1 UniGene:Dr.75122
ProteinModelPortal:Q7ZU99 SMR:Q7ZU99 STRING:Q7ZU99 PRIDE:Q7ZU99
Ensembl:ENSDART00000023779 GeneID:327197 KEGG:dre:327197
InParanoid:Q76KA4 NextBio:20809924 Bgee:Q7ZU99 Uniprot:Q7ZU99
Length = 806
Score = 257 (95.5 bits), Expect = 1.5e-24, Sum P(3) = 1.5e-24
Identities = 45/95 (47%), Positives = 68/95 (71%)
Query: 203 EKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 262
E + + Y+ +GG+ Q+ +IKE++ELP++HP LF A+G+ P+G+LLYGPPGTGKTL+A
Sbjct: 196 ESLNEVGYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIA 255
Query: 263 RAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 297
RAVA+ T F ++G E++ K GE +R+ F
Sbjct: 256 RAVANETGAFFFLINGPEIMSKLAGESESNLRKAF 290
Score = 246 (91.7 bits), Expect = 4.5e-28, Sum P(3) = 4.5e-28
Identities = 45/96 (46%), Positives = 67/96 (69%)
Query: 202 VEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLL 261
V +VP+ T+E +GGLD+ +E++E+++ PV+HP+ F G+ KGVL YGPPG GKTLL
Sbjct: 468 VVEVPNITWEDIGGLDDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLL 527
Query: 262 ARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 297
A+A+A+ + FI + G EL+ + GE VRE+F
Sbjct: 528 AKAIANECQANFISIKGPELLTMWFGESEANVREIF 563
Score = 91 (37.1 bits), Expect = 4.5e-28, Sum P(3) = 4.5e-28
Identities = 18/42 (42%), Positives = 27/42 (64%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 53
+GKTL+ARAVA+ T F ++G E++ K GE +R+ F
Sbjct: 249 TGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAF 290
Score = 42 (19.8 bits), Expect = 4.5e-28, Sum P(3) = 4.5e-28
Identities = 9/49 (18%), Positives = 18/49 (36%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEATK 378
R+ AP ++F R + ++L ++DG + K
Sbjct: 567 RQAAPCVLFFDELDSIAKARGGNVGDGGGAADRVINQILTEMDGMSSKK 615
Score = 39 (18.8 bits), Expect = 1.1e-22, Sum P(3) = 1.1e-22
Identities = 10/43 (23%), Positives = 21/43 (48%)
Query: 72 VDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRL--QAQRN 112
+ A+ + G + + E + + E E NLR+ +A++N
Sbjct: 254 IARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKN 296
Score = 37 (18.1 bits), Expect = 1.5e-24, Sum P(3) = 1.5e-24
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 72 VDEAIKSSEGFKPYYVTKIEELQL 95
VDE+I K++ELQL
Sbjct: 28 VDESINEDNSVVSLSQAKMDELQL 51
>UNIPROTKB|F1NLN4 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:AADN02009235 IPI:IPI00593232 Ensembl:ENSGALT00000019309
Uniprot:F1NLN4
Length = 704
Score = 278 (102.9 bits), Expect = 2.5e-23, P = 2.5e-23
Identities = 49/99 (49%), Positives = 72/99 (72%)
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
P TY+M+GGL +Q+K I+E +ELP+K ELF + GI+ P+GVLLYGPPGTGKTL+A+A+
Sbjct: 313 PQVTYDMIGGLSSQLKTIRETVELPLKRAELFKSYGISPPRGVLLYGPPGTGKTLIAKAI 372
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKK 304
A+ ++G E++ KF GE +R++F ASL++
Sbjct: 373 ANEVGAHVTVINGPEIISKFYGESESRLRQIFAEASLRR 411
Score = 251 (93.4 bits), Expect = 1.2e-27, Sum P(2) = 1.2e-27
Identities = 45/98 (45%), Positives = 68/98 (69%)
Query: 205 VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 264
VP ++ +GGL++ ++K+ +E P+KHP+ F +GI PKGVLLYGPPG KT++A+A
Sbjct: 586 VPKVSWSDIGGLEDVKLKLKQAVEWPLKHPDSFIRMGIQPPKGVLLYGPPGCSKTMIAKA 645
Query: 265 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASL 302
+AH + F+ V G EL+ K++GE R VRE+F A +
Sbjct: 646 LAHESGLNFLAVKGPELMNKYVGESERAVREIFRKARM 683
Score = 93 (37.8 bits), Expect = 1.2e-27, Sum P(2) = 1.2e-27
Identities = 21/70 (30%), Positives = 37/70 (52%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTL+A+A+A+ ++G E++ KF GE +R++F A + R + F +
Sbjct: 363 TGKTLIAKAIANEVGAHVTVINGPEIISKFYGESESRLRQIFAEASLR---RPSIIFIDE 419
Query: 72 VDEAIKSSEG 81
+D EG
Sbjct: 420 LDALCPKREG 429
>UNIPROTKB|F1SN45 [details] [associations]
symbol:SPATA5L1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GeneTree:ENSGT00700000104502 GO:GO:0017111 OMA:TWEQIGG
EMBL:CU457441 Ensembl:ENSSSCT00000005157 Uniprot:F1SN45
Length = 755
Score = 248 (92.4 bits), Expect = 1.0e-26, Sum P(3) = 1.0e-26
Identities = 47/114 (41%), Positives = 75/114 (65%)
Query: 187 KILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPK 246
KI P+ ++ LM V+ + T+E +GGL++ +++K+ IE P+K P F +G+ QPK
Sbjct: 445 KIQPSSFRSVIGLMDVKPI---TWEQIGGLEDAKRKLKQSIEWPLKFPREFVRMGLTQPK 501
Query: 247 GVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
GVLLYGPPG KT L RA+A C+F+ VSG++L F+G+ +++ ++F A
Sbjct: 502 GVLLYGPPGCAKTTLVRALATSCHCSFVSVSGADLFSPFVGDSEKILSQVFQQA 555
Score = 173 (66.0 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 42/102 (41%), Positives = 56/102 (54%)
Query: 213 VGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECT 272
+GGL ++E++ LP+ +P F +LG+A P+GVLL GPPG GKT L RAVA
Sbjct: 202 LGGLAEAADSLRELLRLPLLYPRSFASLGLAVPRGVLLAGPPGVGKTQLVRAVAREAGAE 261
Query: 273 FIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLF 314
+ VS L GE VR +F A ++LA LLF
Sbjct: 262 LLAVSAPALQGARPGETEENVRRVFQRA--QELAGRRPTLLF 301
Score = 69 (29.3 bits), Expect = 1.0e-26, Sum P(3) = 1.0e-26
Identities = 22/61 (36%), Positives = 26/61 (42%)
Query: 13 GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMDV 72
GKT L RAVA + VS L GE VR +F A+ R T F +V
Sbjct: 246 GKTQLVRAVAREAGAELLAVSAPALQGARPGETEENVRRVFQRAQELAGRRPTLLFLDEV 305
Query: 73 D 73
D
Sbjct: 306 D 306
Score = 39 (18.8 bits), Expect = 1.0e-26, Sum P(3) = 1.0e-26
Identities = 10/44 (22%), Positives = 18/44 (40%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDG 373
R + P+++F+ +R + LLN+LDG
Sbjct: 556 RANTPAVVFLDEIDSILGSRSISKTGCNVQ-ERVLSVLLNELDG 598
>UNIPROTKB|Q8NB90 [details] [associations]
symbol:SPATA5 "Spermatogenesis-associated protein 5"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
GO:GO:0007275 GO:GO:0005739 GO:GO:0005524 GO:GO:0005737
GO:GO:0030154 GO:GO:0007283 HSSP:Q01853 eggNOG:COG0464
HOGENOM:HOG000223225 KO:K14575 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 EMBL:AC021205
EMBL:AF361489 EMBL:AF479656 EMBL:AK091384 EMBL:AC026402
EMBL:AC097492 EMBL:AC109357 EMBL:BC048217 IPI:IPI00329583
IPI:IPI00890715 IPI:IPI00890727 RefSeq:NP_660208.2
UniGene:Hs.709648 ProteinModelPortal:Q8NB90 SMR:Q8NB90
IntAct:Q8NB90 STRING:Q8NB90 PhosphoSite:Q8NB90 DMDM:308153554
PaxDb:Q8NB90 PRIDE:Q8NB90 DNASU:166378 Ensembl:ENST00000274008
GeneID:166378 KEGG:hsa:166378 UCSC:uc003iey.3 UCSC:uc003iez.4
CTD:166378 GeneCards:GC04P123844 H-InvDB:HIX0022056 HGNC:HGNC:18119
HPA:HPA036451 MIM:613940 neXtProt:NX_Q8NB90 PharmGKB:PA38294
HOVERGEN:HBG108504 InParanoid:Q8NB90 OMA:NDIRPSA OrthoDB:EOG43FGWF
PhylomeDB:Q8NB90 GenomeRNAi:166378 NextBio:88589 Bgee:Q8NB90
CleanEx:HS_SPATA5 Genevestigator:Q8NB90 Uniprot:Q8NB90
Length = 893
Score = 277 (102.6 bits), Expect = 3.1e-25, Sum P(2) = 3.1e-25
Identities = 50/95 (52%), Positives = 71/95 (74%)
Query: 209 TYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH 268
TY+M+GGL +Q+K I+E+IELP+K PELF + GI P+GVLLYGPPGTGKT++ARAVA+
Sbjct: 351 TYDMIGGLSSQLKAIREIIELPLKQPELFKSYGIPAPRGVLLYGPPGTGKTMIARAVANE 410
Query: 269 TECTFIRVSGSELVQKFIGEGSRMVRELFVMASLK 303
++G E++ KF GE +R++F A+L+
Sbjct: 411 VGAYVSVINGPEIISKFYGETEAKLRQIFAEATLR 445
Score = 242 (90.2 bits), Expect = 3.8e-26, Sum P(3) = 3.8e-26
Identities = 44/107 (41%), Positives = 70/107 (65%)
Query: 191 NKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLL 250
N + P + VP+ ++ +GGL++ ++++ +E P+KHPE F +GI PKGVLL
Sbjct: 607 NDIRPSAMREIAIDVPNVSWSDIGGLESIKLKLEQAVEWPLKHPESFIRMGIQPPKGVLL 666
Query: 251 YGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 297
YGPPG KT++A+A+A+ + F+ + G EL+ K++GE R VRE F
Sbjct: 667 YGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVRETF 713
Score = 89 (36.4 bits), Expect = 3.8e-26, Sum P(3) = 3.8e-26
Identities = 22/70 (31%), Positives = 36/70 (51%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKT++ARAVA+ ++G E++ KF GE +R++F A + S F +
Sbjct: 398 TGKTMIARAVANEVGAYVSVINGPEIISKFYGETEAKLRQIFAEATLRHPSI---IFIDE 454
Query: 72 VDEAIKSSEG 81
+D EG
Sbjct: 455 LDALCPKREG 464
Score = 47 (21.6 bits), Expect = 3.8e-26, Sum P(3) = 3.8e-26
Identities = 14/49 (28%), Positives = 18/49 (36%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEATK 378
R APSIIF R + +LL ++DG E K
Sbjct: 717 RAVAPSIIFFDELDALAVERGSSLGAGNVA-DRVLAQLLTEMDGIEQLK 764
>CGD|CAL0000732 [details] [associations]
symbol:CDC48 species:5476 "Candida albicans" [GO:0005886
"plasma membrane" evidence=IDA] [GO:0043332 "mating projection tip"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0000837 "Doa10p ubiquitin
ligase complex" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051228 "mitotic spindle
disassembly" evidence=IEA] [GO:0016320 "endoplasmic reticulum
membrane fusion" evidence=IEA] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0009986 "cell
surface" evidence=IDA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 250 (93.1 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 42/88 (47%), Positives = 65/88 (73%)
Query: 210 YEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 269
Y+ +GG Q+ +I+E++ELP++HP+LF ++GI PKG+L+YGPPGTGKT++ARAVA+ T
Sbjct: 214 YDDIGGCKKQMAQIRELVELPLRHPQLFKSIGIKPPKGILMYGPPGTGKTIMARAVANET 273
Query: 270 ECTFIRVSGSELVQKFIGEGSRMVRELF 297
F ++G E++ K GE +R+ F
Sbjct: 274 GAFFFLINGPEIMSKMAGESESNLRKAF 301
Score = 241 (89.9 bits), Expect = 4.4e-26, Sum P(3) = 4.4e-26
Identities = 47/97 (48%), Positives = 64/97 (65%)
Query: 201 MVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTL 260
+VE V + T++ +GGLDN E+KE +E PV HP+ + G+A KGVL +GPPGTGKTL
Sbjct: 479 VVENV-NVTWDDIGGLDNIKNELKETVEYPVLHPDQYQKFGLAPTKGVLFFGPPGTGKTL 537
Query: 261 LARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 297
LA+AVA FI V G EL+ + GE +R++F
Sbjct: 538 LAKAVATEVSANFISVKGPELLSMWYGESESNIRDIF 574
Score = 89 (36.4 bits), Expect = 4.4e-26, Sum P(3) = 4.4e-26
Identities = 17/42 (40%), Positives = 27/42 (64%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 53
+GKT++ARAVA+ T F ++G E++ K GE +R+ F
Sbjct: 260 TGKTIMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAF 301
Score = 49 (22.3 bits), Expect = 4.4e-26, Sum P(3) = 4.4e-26
Identities = 11/49 (22%), Positives = 19/49 (38%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEATK 378
R AP+++F+ R + +LL ++DG A K
Sbjct: 578 RAAAPTVVFLDELDSIAKARGGSHGDAGGASDRVVNQLLTEMDGMNAKK 626
>UNIPROTKB|Q59WG3 [details] [associations]
symbol:CDC48 "Putative uncharacterized protein CDC48"
species:237561 "Candida albicans SC5314" [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0009986 "cell surface" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 250 (93.1 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 42/88 (47%), Positives = 65/88 (73%)
Query: 210 YEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 269
Y+ +GG Q+ +I+E++ELP++HP+LF ++GI PKG+L+YGPPGTGKT++ARAVA+ T
Sbjct: 214 YDDIGGCKKQMAQIRELVELPLRHPQLFKSIGIKPPKGILMYGPPGTGKTIMARAVANET 273
Query: 270 ECTFIRVSGSELVQKFIGEGSRMVRELF 297
F ++G E++ K GE +R+ F
Sbjct: 274 GAFFFLINGPEIMSKMAGESESNLRKAF 301
Score = 241 (89.9 bits), Expect = 4.4e-26, Sum P(3) = 4.4e-26
Identities = 47/97 (48%), Positives = 64/97 (65%)
Query: 201 MVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTL 260
+VE V + T++ +GGLDN E+KE +E PV HP+ + G+A KGVL +GPPGTGKTL
Sbjct: 479 VVENV-NVTWDDIGGLDNIKNELKETVEYPVLHPDQYQKFGLAPTKGVLFFGPPGTGKTL 537
Query: 261 LARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 297
LA+AVA FI V G EL+ + GE +R++F
Sbjct: 538 LAKAVATEVSANFISVKGPELLSMWYGESESNIRDIF 574
Score = 89 (36.4 bits), Expect = 4.4e-26, Sum P(3) = 4.4e-26
Identities = 17/42 (40%), Positives = 27/42 (64%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 53
+GKT++ARAVA+ T F ++G E++ K GE +R+ F
Sbjct: 260 TGKTIMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAF 301
Score = 49 (22.3 bits), Expect = 4.4e-26, Sum P(3) = 4.4e-26
Identities = 11/49 (22%), Positives = 19/49 (38%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEATK 378
R AP+++F+ R + +LL ++DG A K
Sbjct: 578 RAAAPTVVFLDELDSIAKARGGSHGDAGGASDRVVNQLLTEMDGMNAKK 626
>FB|FBgn0261014 [details] [associations]
symbol:TER94 "TER94" species:7227 "Drosophila melanogaster"
[GO:0045169 "fusome" evidence=IDA;NAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005783 "endoplasmic reticulum" evidence=NAS] [GO:0007030
"Golgi organization" evidence=IMP] [GO:0007317 "regulation of pole
plasm oskar mRNA localization" evidence=IMP] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=ISS] [GO:0000226
"microtubule cytoskeleton organization" evidence=IMP] [GO:0007029
"endoplasmic reticulum organization" evidence=IMP] [GO:0045451
"pole plasm oskar mRNA localization" evidence=IMP] [GO:0008103
"oocyte microtubule cytoskeleton polarization" evidence=IMP]
[GO:0008104 "protein localization" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0000502 "proteasome complex" evidence=NAS]
[GO:0006508 "proteolysis" evidence=IMP] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0030433 "ER-associated protein catabolic
process" evidence=IMP] [GO:0006200 "ATP catabolic process"
evidence=IGI] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0043523 "regulation of neuron apoptotic process" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 EMBL:AE013599 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0005875 GO:GO:0000226
GO:GO:0030154 GO:GO:0005811 GO:GO:0006810 GO:GO:0006200
GO:GO:0048477 GO:GO:0030433 GO:GO:0000502 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 GO:GO:0007030
GO:GO:0007029 GO:GO:0016320 GO:GO:0045169 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 GO:GO:0007317 EMBL:AF047037
EMBL:AF202034 EMBL:AF132553 RefSeq:NP_001097249.1
RefSeq:NP_001097250.1 RefSeq:NP_477369.1 UniGene:Dm.2968
ProteinModelPortal:Q7KN62 SMR:Q7KN62 IntAct:Q7KN62 STRING:Q7KN62
PaxDb:Q7KN62 PRIDE:Q7KN62 EnsemblMetazoa:FBtr0088391 GeneID:36040
KEGG:dme:Dmel_CG2331 UCSC:CG2331-RA CTD:36040 FlyBase:FBgn0261014
InParanoid:Q7KN62 OMA:RRGTDVN OrthoDB:EOG4TX96S GenomeRNAi:36040
NextBio:796507 Bgee:Q7KN62 Uniprot:Q7KN62
Length = 801
Score = 253 (94.1 bits), Expect = 2.6e-22, Sum P(2) = 2.6e-22
Identities = 46/104 (44%), Positives = 69/104 (66%)
Query: 194 DPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGP 253
DP+ E + Y+ +GG Q+ +IKE++ELP++HP LF A+G+ P+G+L+YGP
Sbjct: 184 DPIKREEEEESLNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGP 243
Query: 254 PGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 297
PGTGKTL+ARAVA+ T F ++G E++ K GE +R+ F
Sbjct: 244 PGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAF 287
Score = 242 (90.2 bits), Expect = 4.6e-26, Sum P(3) = 4.6e-26
Identities = 50/122 (40%), Positives = 77/122 (63%)
Query: 176 VALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPE 235
V + N Y + K P+ + V VE VP++T+ +GGL++ KE++E+++ PV+HP+
Sbjct: 444 VTMENFRYAMTKSSPSALRETV----VE-VPNTTWTDIGGLESVKKELQELVQYPVEHPD 498
Query: 236 LFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRE 295
F G+ +GVL YGPPG GKTLLA+A+A+ + FI V G EL+ + GE VR+
Sbjct: 499 KFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRD 558
Query: 296 LF 297
+F
Sbjct: 559 IF 560
Score = 91 (37.1 bits), Expect = 4.6e-26, Sum P(3) = 4.6e-26
Identities = 18/42 (42%), Positives = 27/42 (64%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 53
+GKTL+ARAVA+ T F ++G E++ K GE +R+ F
Sbjct: 246 TGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAF 287
Score = 42 (19.8 bits), Expect = 4.6e-26, Sum P(3) = 4.6e-26
Identities = 10/49 (20%), Positives = 17/49 (34%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEATK 378
R AP ++F R + ++L ++DG A K
Sbjct: 564 RSAAPCVLFFDELDSIAKARGGNVGDAGGAADRVINQILTEMDGMGAKK 612
Score = 39 (18.8 bits), Expect = 1.1e-20, Sum P(3) = 1.1e-20
Identities = 10/43 (23%), Positives = 21/43 (48%)
Query: 72 VDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRL--QAQRN 112
+ A+ + G + + E + + E E NLR+ +A++N
Sbjct: 251 IARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKN 293
>DICTYBASE|DDB_G0278435 [details] [associations]
symbol:DDB_G0278435 "AAA ATPase domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0278435 GO:GO:0005524 EMBL:AAFI02000023
GO:GO:0016887 eggNOG:COG0464 KO:K14575 InterPro:IPR009010
SUPFAM:SSF50692 RefSeq:XP_642364.1 ProteinModelPortal:Q54Y38
EnsemblProtists:DDB0237527 GeneID:8621569 KEGG:ddi:DDB_G0278435
InParanoid:Q54Y38 OMA:TSICREA Uniprot:Q54Y38
Length = 886
Score = 241 (89.9 bits), Expect = 9.8e-26, Sum P(3) = 9.8e-26
Identities = 48/110 (43%), Positives = 72/110 (65%)
Query: 191 NKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLL 250
N+V P +V ++P + +GG ++ +++KE IE P+K+P+ F +GI PKG+LL
Sbjct: 602 NQVKPSSMREVVVEIPKVFWGDIGGQEHIKQKLKEAIEWPLKYPQSFIRMGIKPPKGILL 661
Query: 251 YGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
YGPPG KTLLA+A+A + FI V G EL+ K++GE R VR++F A
Sbjct: 662 YGPPGCSKTLLAKALATESGLNFIAVKGPELLSKWVGESERAVRDIFKKA 711
Score = 225 (84.3 bits), Expect = 1.4e-16, Sum P(2) = 1.4e-16
Identities = 41/94 (43%), Positives = 65/94 (69%)
Query: 210 YEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 269
++ +GGLD Q+K+I+E+I+L +L + G+ PKG+LLYGPPGTGKTLLAR VA T
Sbjct: 311 FQSIGGLDLQVKQIRELIDLSFYKLDLLKSFGVKPPKGILLYGPPGTGKTLLARIVATQT 370
Query: 270 ECTFIRVSGSELVQKFIGEGSRMVRELFVMASLK 303
T ++G++++ KF G + ++++F A+ K
Sbjct: 371 NATLFTINGADILDKFYGMTEKTLQKIFKDAAQK 404
Score = 91 (37.1 bits), Expect = 9.8e-26, Sum P(3) = 9.8e-26
Identities = 19/51 (37%), Positives = 31/51 (60%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSS 62
+GKTLLAR VA T T ++G++++ KF G + ++++F A K S
Sbjct: 357 TGKTLLARIVATQTNATLFTINGADILDKFYGMTEKTLQKIFKDAAQKSPS 407
Score = 45 (20.9 bits), Expect = 9.8e-26, Sum P(3) = 9.8e-26
Identities = 11/46 (23%), Positives = 21/46 (45%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFE 375
R+++PSI+F V+R + +LL ++DG +
Sbjct: 712 RQNSPSILFFDEIDGLAISRSGEGSGA---VERVVSQLLTEMDGIQ 754
>ASPGD|ASPL0000062283 [details] [associations]
symbol:AN1366 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:BN001308 HOGENOM:HOG000223225 GO:GO:0017111 OMA:REGFTTI
EnsemblFungi:CADANIAT00001245 Uniprot:C8VRW3
Length = 729
Score = 257 (95.5 bits), Expect = 1.0e-25, Sum P(2) = 1.0e-25
Identities = 52/112 (46%), Positives = 71/112 (63%)
Query: 189 LPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGV 248
LP K+ P +PD+T+ +G L E+ I P+KHPEL+ ++GI P GV
Sbjct: 448 LP-KIQPSSKREGFATIPDTTWADIGALSGIRDELATAIVDPIKHPELYASVGITAPTGV 506
Query: 249 LLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
LL+GPPG GKTLLA+AVA+ + FI V G EL+ K++GE R VR++FV A
Sbjct: 507 LLWGPPGCGKTLLAKAVANESRANFISVKGPELLNKYVGESERAVRQVFVRA 558
Score = 180 (68.4 bits), Expect = 8.3e-11, P = 8.3e-11
Identities = 38/107 (35%), Positives = 65/107 (60%)
Query: 202 VEKVPDSTYEM--VGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKT 259
V++ P + + +GGLD+ ++++ +++ LP+ P+++ A + P+GVLL+GPPG GKT
Sbjct: 154 VDRSPPTHVSLADLGGLDDVVQQLGDLVILPMTRPQVYLASNVQPPRGVLLHGPPGCGKT 213
Query: 260 LLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLA 306
++A A A FI +S +V GE + +RE F A K+LA
Sbjct: 214 MIANAFAAELGVPFISISAPSIVSGMSGESEKALREHFEEA--KRLA 258
Score = 128 (50.1 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 25/45 (55%), Positives = 33/45 (73%)
Query: 13 GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
GKTLLA+AVA+ + FI V G EL+ K++GE R VR++FV AR
Sbjct: 515 GKTLLAKAVANESRANFISVKGPELLNKYVGESERAVRQVFVRAR 559
Score = 69 (29.3 bits), Expect = 1.0e-25, Sum P(2) = 1.0e-25
Identities = 16/45 (35%), Positives = 23/45 (51%)
Query: 13 GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
GKT++A A A FI +S +V GE + +RE F A+
Sbjct: 211 GKTMIANAFAAELGVPFISISAPSIVSGMSGESEKALREHFEEAK 255
>UNIPROTKB|G3V4X1 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003959 Pfam:PF00004 GO:GO:0005524 EMBL:AL161662
HGNC:HGNC:9547 EMBL:AL355074 ProteinModelPortal:G3V4X1 SMR:G3V4X1
Ensembl:ENST00000553835 ArrayExpress:G3V4X1 Bgee:G3V4X1
Uniprot:G3V4X1
Length = 84
Score = 291 (107.5 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 53/80 (66%), Positives = 65/80 (81%)
Query: 194 DPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGP 253
DPLV++M VEK P TY +GGLDNQI+EIKE +ELP+ HPE ++ +GI PKGV+LYGP
Sbjct: 5 DPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGP 64
Query: 254 PGTGKTLLARAVAHHTECTF 273
PGTGKTLLA+AVA+ T TF
Sbjct: 65 PGTGKTLLAKAVANQTSATF 84
>SGD|S000003957 [details] [associations]
symbol:RIX7 "Putative ATPase of the AAA family" species:4932
"Saccharomyces cerevisiae" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0000055 "ribosomal large subunit
export from nucleus" evidence=IMP] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0042273 "ribosomal large
subunit biogenesis" evidence=IGI;IMP] [GO:0030687 "preribosome,
large subunit precursor" evidence=IDA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000003957
GO:GO:0005524 GO:GO:0005730 EMBL:BK006945 GO:GO:0016887
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0042273 GO:GO:0030687
GO:GO:0000055 KO:K14571 OMA:NDMTLKE GeneTree:ENSGT00570000079239
EMBL:Z73139 PIR:S64785 RefSeq:NP_013066.1 ProteinModelPortal:Q07844
SMR:Q07844 DIP:DIP-6385N IntAct:Q07844 MINT:MINT-621241
STRING:Q07844 PaxDb:Q07844 PeptideAtlas:Q07844 EnsemblFungi:YLL034C
GeneID:850625 KEGG:sce:YLL034C CYGD:YLL034c OrthoDB:EOG40GH00
NextBio:966532 Genevestigator:Q07844 GermOnline:YLL034C
Uniprot:Q07844
Length = 837
Score = 249 (92.7 bits), Expect = 1.4e-25, Sum P(2) = 1.4e-25
Identities = 50/114 (43%), Positives = 69/114 (60%)
Query: 187 KILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPK 246
K LP + P VPD T+ VG L E+ I P+K PEL++ +GI+ P
Sbjct: 510 KALPT-IQPTAKREGFATVPDVTWANVGALQRVRLELNMAIVQPIKRPELYEKVGISAPG 568
Query: 247 GVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
GVLL+GPPG GKTLLA+AVA+ + FI + G EL+ K++GE R +R++F A
Sbjct: 569 GVLLWGPPGCGKTLLAKAVANESRANFISIKGPELLNKYVGESERSIRQVFTRA 622
Score = 216 (81.1 bits), Expect = 6.8e-15, Sum P(2) = 6.8e-15
Identities = 38/92 (41%), Positives = 62/92 (67%)
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
P+S+ + +GG+D+ + ++ E+I LP+ HPE+F + G+ P+GVLL+GPPG GKT +A A+
Sbjct: 200 PNSSLKSLGGMDDVVAQLMELIGLPILHPEIFLSTGVEPPRGVLLHGPPGCGKTSIANAL 259
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELF 297
A + FI +S +V GE + +R+LF
Sbjct: 260 AGELQVPFISISAPSVVSGMSGESEKKIRDLF 291
Score = 122 (48.0 bits), Expect = 0.00030, P = 0.00030
Identities = 22/45 (48%), Positives = 32/45 (71%)
Query: 13 GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
GKTLLA+AVA+ + FI + G EL+ K++GE R +R++F AR
Sbjct: 579 GKTLLAKAVANESRANFISIKGPELLNKYVGESERSIRQVFTRAR 623
Score = 78 (32.5 bits), Expect = 1.4e-25, Sum P(2) = 1.4e-25
Identities = 17/45 (37%), Positives = 25/45 (55%)
Query: 13 GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
GKT +A A+A + FI +S +V GE + +R+LF AR
Sbjct: 251 GKTSIANALAGELQVPFISISAPSVVSGMSGESEKKIRDLFDEAR 295
Score = 40 (19.1 bits), Expect = 1.3e-21, Sum P(2) = 1.3e-21
Identities = 12/48 (25%), Positives = 21/48 (43%)
Query: 71 DVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNAKV 118
DV E+ G P Y + EE + E + ++ NE+N ++
Sbjct: 102 DVIESELEEFGSYPGYNNEEEEKPSLEEELAKKNMMIERDTNEMNKRI 149
>UNIPROTKB|E1BTS8 [details] [associations]
symbol:LOC426240 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
GeneTree:ENSGT00700000104534 EMBL:AADN02060646 EMBL:AADN02060647
EMBL:AADN02060648 EMBL:AADN02060649 EMBL:AADN02060650
EMBL:AADN02060651 EMBL:AADN02060652 EMBL:AADN02060653
IPI:IPI00823321 Ensembl:ENSGALT00000039430 ArrayExpress:E1BTS8
Uniprot:E1BTS8
Length = 804
Score = 255 (94.8 bits), Expect = 1.5e-24, Sum P(3) = 1.5e-24
Identities = 45/93 (48%), Positives = 66/93 (70%)
Query: 203 EKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 262
E + + Y+ +GG Q+ +IKE++ELP++HP LF A+G+ P+G+LLYGPPGTGKTL+A
Sbjct: 196 ESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIA 255
Query: 263 RAVAHHTECTFIRVSGSELVQKFIGEGSRMVRE 295
RAVA+ T F ++G E++ K GEG R+
Sbjct: 256 RAVANETGAFFFLINGPEIMSKLAGEGESACRK 288
Score = 241 (89.9 bits), Expect = 1.6e-25, Sum P(3) = 1.6e-25
Identities = 44/96 (45%), Positives = 66/96 (68%)
Query: 202 VEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLL 261
V +VP T+E +GGL++ +E++E+++ PV+HP+ F G+ KGVL YGPPG GKTLL
Sbjct: 466 VVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLL 525
Query: 262 ARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 297
A+A+A+ + FI + G EL+ + GE VRE+F
Sbjct: 526 AKAIANECQANFISIKGPELLTMWFGESEANVREIF 561
Score = 91 (37.1 bits), Expect = 1.6e-25, Sum P(3) = 1.6e-25
Identities = 18/40 (45%), Positives = 26/40 (65%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRE 51
+GKTL+ARAVA+ T F ++G E++ K GEG R+
Sbjct: 249 TGKTLIARAVANETGAFFFLINGPEIMSKLAGEGESACRK 288
Score = 41 (19.5 bits), Expect = 1.6e-25, Sum P(3) = 1.6e-25
Identities = 9/49 (18%), Positives = 17/49 (34%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEATK 378
R+ AP ++F R + ++L ++DG K
Sbjct: 565 RQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKK 613
Score = 40 (19.1 bits), Expect = 1.5e-24, Sum P(3) = 1.5e-24
Identities = 10/24 (41%), Positives = 12/24 (50%)
Query: 72 VDEAIKSSEGFKPYYVTKIEELQL 95
VDEAI K++ELQL
Sbjct: 28 VDEAINEDNSVVSLSQAKMDELQL 51
>UNIPROTKB|Q6GL04 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000785
"chromatin" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0019985
"translesion synthesis" evidence=ISS] [GO:0030433 "ER-associated
protein catabolic process" evidence=ISS] [GO:0032403 "protein
complex binding" evidence=ISS] [GO:0034214 "protein hexamerization"
evidence=ISS] [GO:0035861 "site of double-strand break"
evidence=ISS] [GO:0035101 "FACT complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0032403 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 HSSP:Q01853 eggNOG:COG0464
GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:BC074716 RefSeq:NP_001005677.1 UniGene:Str.1287
ProteinModelPortal:Q6GL04 SMR:Q6GL04 STRING:Q6GL04 PRIDE:Q6GL04
GeneID:448177 KEGG:xtr:448177 Xenbase:XB-GENE-969573
InParanoid:Q6GL04 Uniprot:Q6GL04
Length = 805
Score = 255 (94.8 bits), Expect = 3.1e-24, Sum P(3) = 3.1e-24
Identities = 45/95 (47%), Positives = 67/95 (70%)
Query: 203 EKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 262
E + + Y+ +GG Q+ +IKE++ELP++HP LF A+G+ P+G+LLYGPPGTGKTL+A
Sbjct: 196 ESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIA 255
Query: 263 RAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 297
RAVA+ T F ++G E++ K GE +R+ F
Sbjct: 256 RAVANETGAFFFLINGPEIMSKLAGESESNLRKAF 290
Score = 241 (89.9 bits), Expect = 1.6e-25, Sum P(3) = 1.6e-25
Identities = 44/96 (45%), Positives = 66/96 (68%)
Query: 202 VEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLL 261
V +VP T+E +GGL++ +E++E+++ PV+HP+ F G+ KGVL YGPPG GKTLL
Sbjct: 468 VVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLL 527
Query: 262 ARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 297
A+A+A+ + FI + G EL+ + GE VRE+F
Sbjct: 528 AKAIANECQANFISIKGPELLTMWFGESEANVREIF 563
Score = 91 (37.1 bits), Expect = 1.6e-25, Sum P(3) = 1.6e-25
Identities = 18/42 (42%), Positives = 27/42 (64%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 53
+GKTL+ARAVA+ T F ++G E++ K GE +R+ F
Sbjct: 249 TGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAF 290
Score = 41 (19.5 bits), Expect = 1.6e-25, Sum P(3) = 1.6e-25
Identities = 9/49 (18%), Positives = 17/49 (34%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEATK 378
R+ AP ++F R + ++L ++DG K
Sbjct: 567 RQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKK 615
Score = 39 (18.8 bits), Expect = 3.6e-20, Sum P(3) = 3.6e-20
Identities = 10/43 (23%), Positives = 21/43 (48%)
Query: 72 VDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRL--QAQRN 112
+ A+ + G + + E + + E E NLR+ +A++N
Sbjct: 254 IARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKN 296
Score = 37 (18.1 bits), Expect = 3.1e-24, Sum P(3) = 3.1e-24
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 72 VDEAIKSSEGFKPYYVTKIEELQL 95
VDE+I K++ELQL
Sbjct: 28 VDESINEDNSVVSLSQAKMDELQL 51
>UNIPROTKB|G3X757 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0070842 "aggresome assembly"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 UniGene:Bt.49331 EMBL:DAAA02023126
ProteinModelPortal:G3X757 Ensembl:ENSBTAT00000019970 Uniprot:G3X757
Length = 806
Score = 255 (94.8 bits), Expect = 2.0e-24, Sum P(3) = 2.0e-24
Identities = 45/95 (47%), Positives = 67/95 (70%)
Query: 203 EKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 262
E + + Y+ +GG Q+ +IKE++ELP++HP LF A+G+ P+G+LLYGPPGTGKTL+A
Sbjct: 196 ESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIA 255
Query: 263 RAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 297
RAVA+ T F ++G E++ K GE +R+ F
Sbjct: 256 RAVANETGAFFFLINGPEIMSKLAGESESNLRKAF 290
Score = 241 (89.9 bits), Expect = 1.6e-25, Sum P(3) = 1.6e-25
Identities = 44/96 (45%), Positives = 66/96 (68%)
Query: 202 VEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLL 261
V +VP T+E +GGL++ +E++E+++ PV+HP+ F G+ KGVL YGPPG GKTLL
Sbjct: 468 VVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLL 527
Query: 262 ARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 297
A+A+A+ + FI + G EL+ + GE VRE+F
Sbjct: 528 AKAIANECQANFISIKGPELLTMWFGESEANVREIF 563
Score = 91 (37.1 bits), Expect = 1.6e-25, Sum P(3) = 1.6e-25
Identities = 18/42 (42%), Positives = 27/42 (64%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 53
+GKTL+ARAVA+ T F ++G E++ K GE +R+ F
Sbjct: 249 TGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAF 290
Score = 41 (19.5 bits), Expect = 1.6e-25, Sum P(3) = 1.6e-25
Identities = 9/49 (18%), Positives = 17/49 (34%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEATK 378
R+ AP ++F R + ++L ++DG K
Sbjct: 567 RQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKK 615
Score = 39 (18.8 bits), Expect = 2.0e-24, Sum P(3) = 2.0e-24
Identities = 10/24 (41%), Positives = 12/24 (50%)
Query: 72 VDEAIKSSEGFKPYYVTKIEELQL 95
VDEAI K++ELQL
Sbjct: 28 VDEAINEDNSVVSLSQPKMDELQL 51
Score = 39 (18.8 bits), Expect = 3.7e-20, Sum P(3) = 3.7e-20
Identities = 10/43 (23%), Positives = 21/43 (48%)
Query: 72 VDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRL--QAQRN 112
+ A+ + G + + E + + E E NLR+ +A++N
Sbjct: 254 IARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKN 296
>UNIPROTKB|Q3ZBT1 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
EMBL:BC103125 IPI:IPI00710727 RefSeq:NP_001029466.1
UniGene:Bt.49331 ProteinModelPortal:Q3ZBT1 SMR:Q3ZBT1 IntAct:Q3ZBT1
STRING:Q3ZBT1 PRIDE:Q3ZBT1 GeneID:507345 KEGG:bta:507345 CTD:7415
InParanoid:Q3ZBT1 OrthoDB:EOG45TCMK NextBio:20868019 Uniprot:Q3ZBT1
Length = 806
Score = 255 (94.8 bits), Expect = 2.0e-24, Sum P(3) = 2.0e-24
Identities = 45/95 (47%), Positives = 67/95 (70%)
Query: 203 EKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 262
E + + Y+ +GG Q+ +IKE++ELP++HP LF A+G+ P+G+LLYGPPGTGKTL+A
Sbjct: 196 ESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIA 255
Query: 263 RAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 297
RAVA+ T F ++G E++ K GE +R+ F
Sbjct: 256 RAVANETGAFFFLINGPEIMSKLAGESESNLRKAF 290
Score = 241 (89.9 bits), Expect = 1.6e-25, Sum P(3) = 1.6e-25
Identities = 44/96 (45%), Positives = 66/96 (68%)
Query: 202 VEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLL 261
V +VP T+E +GGL++ +E++E+++ PV+HP+ F G+ KGVL YGPPG GKTLL
Sbjct: 468 VVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLL 527
Query: 262 ARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 297
A+A+A+ + FI + G EL+ + GE VRE+F
Sbjct: 528 AKAIANECQANFISIKGPELLTMWFGESEANVREIF 563
Score = 91 (37.1 bits), Expect = 1.6e-25, Sum P(3) = 1.6e-25
Identities = 18/42 (42%), Positives = 27/42 (64%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 53
+GKTL+ARAVA+ T F ++G E++ K GE +R+ F
Sbjct: 249 TGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAF 290
Score = 41 (19.5 bits), Expect = 1.6e-25, Sum P(3) = 1.6e-25
Identities = 9/49 (18%), Positives = 17/49 (34%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEATK 378
R+ AP ++F R + ++L ++DG K
Sbjct: 567 RQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKK 615
Score = 39 (18.8 bits), Expect = 2.0e-24, Sum P(3) = 2.0e-24
Identities = 10/24 (41%), Positives = 12/24 (50%)
Query: 72 VDEAIKSSEGFKPYYVTKIEELQL 95
VDEAI K++ELQL
Sbjct: 28 VDEAINEDNSVVSLSQPKMDELQL 51
Score = 39 (18.8 bits), Expect = 3.7e-20, Sum P(3) = 3.7e-20
Identities = 10/43 (23%), Positives = 21/43 (48%)
Query: 72 VDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRL--QAQRN 112
+ A+ + G + + E + + E E NLR+ +A++N
Sbjct: 254 IARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKN 296
>UNIPROTKB|P55072 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9606 "Homo sapiens" [GO:0008289 "lipid binding"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0032403 "protein
complex binding" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IEA] [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0070842 "aggresome assembly" evidence=IEA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISS] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=ISS]
[GO:0006281 "DNA repair" evidence=NAS] [GO:0006974 "response to DNA
damage stimulus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS] [GO:0005829
"cytosol" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=NAS] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IDA] [GO:0030433 "ER-associated
protein catabolic process" evidence=IMP;TAS] [GO:0030968
"endoplasmic reticulum unfolded protein response" evidence=TAS]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IDA;NAS] [GO:0042981 "regulation of
apoptotic process" evidence=TAS] [GO:0045184 "establishment of
protein localization" evidence=TAS] [GO:0019985 "translesion
synthesis" evidence=IMP] [GO:0035861 "site of double-strand break"
evidence=IDA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IMP] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0019903 "protein phosphatase binding" evidence=IPI] [GO:0045732
"positive regulation of protein catabolic process" evidence=IDA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IDA] [GO:0031593 "polyubiquitin binding" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0031334
GO:GO:0051260 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0006919 EMBL:CH471071 GO:GO:0030433 GO:GO:0006302
GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279 GO:GO:0031593
GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 Orphanet:803 PDB:3TIW
PDBsum:3TIW GO:GO:0030968 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
GO:GO:0030970 TCDB:3.A.16.1.1 GO:GO:0070842 GO:GO:0035861
GO:GO:0019985 EMBL:AC004472 EMBL:AL353795 PDB:3QC8 PDB:3QQ8
PDB:3QWZ PDBsum:3QC8 PDBsum:3QQ8 PDBsum:3QWZ HOVERGEN:HBG001226
PDB:3EBB PDBsum:3EBB CTD:7415 OrthoDB:EOG45TCMK EMBL:AF100752
EMBL:AK312310 EMBL:BC110913 EMBL:BC121794 EMBL:Z70768
IPI:IPI00022774 PIR:T02243 RefSeq:NP_009057.1 UniGene:Hs.529782
PDB:3HU1 PDB:3HU2 PDB:3HU3 PDB:3QQ7 PDBsum:3HU1 PDBsum:3HU2
PDBsum:3HU3 PDBsum:3QQ7 ProteinModelPortal:P55072 SMR:P55072
DIP:DIP-33543N IntAct:P55072 MINT:MINT-272884 STRING:P55072
PhosphoSite:P55072 DMDM:6094447 DOSAC-COBS-2DPAGE:P55072 OGP:P55072
REPRODUCTION-2DPAGE:IPI00022774 REPRODUCTION-2DPAGE:P55072
PaxDb:P55072 PRIDE:P55072 Ensembl:ENST00000358901 GeneID:7415
KEGG:hsa:7415 UCSC:uc003zvy.2 GeneCards:GC09M035056 HGNC:HGNC:12666
HPA:CAB005593 HPA:HPA012728 HPA:HPA012814 MIM:167320 MIM:601023
MIM:613954 neXtProt:NX_P55072 Orphanet:52430 PharmGKB:PA37289
InParanoid:P55072 BindingDB:P55072 ChEMBL:CHEMBL1075145 ChiTaRS:VCP
EvolutionaryTrace:P55072 GenomeRNAi:7415 NextBio:29034
ArrayExpress:P55072 Bgee:P55072 CleanEx:HS_VCP
Genevestigator:P55072 GermOnline:ENSG00000165280 Uniprot:P55072
Length = 806
Score = 255 (94.8 bits), Expect = 2.0e-24, Sum P(3) = 2.0e-24
Identities = 45/95 (47%), Positives = 67/95 (70%)
Query: 203 EKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 262
E + + Y+ +GG Q+ +IKE++ELP++HP LF A+G+ P+G+LLYGPPGTGKTL+A
Sbjct: 196 ESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIA 255
Query: 263 RAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 297
RAVA+ T F ++G E++ K GE +R+ F
Sbjct: 256 RAVANETGAFFFLINGPEIMSKLAGESESNLRKAF 290
Score = 241 (89.9 bits), Expect = 1.6e-25, Sum P(3) = 1.6e-25
Identities = 44/96 (45%), Positives = 66/96 (68%)
Query: 202 VEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLL 261
V +VP T+E +GGL++ +E++E+++ PV+HP+ F G+ KGVL YGPPG GKTLL
Sbjct: 468 VVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLL 527
Query: 262 ARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 297
A+A+A+ + FI + G EL+ + GE VRE+F
Sbjct: 528 AKAIANECQANFISIKGPELLTMWFGESEANVREIF 563
Score = 91 (37.1 bits), Expect = 1.6e-25, Sum P(3) = 1.6e-25
Identities = 18/42 (42%), Positives = 27/42 (64%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 53
+GKTL+ARAVA+ T F ++G E++ K GE +R+ F
Sbjct: 249 TGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAF 290
Score = 41 (19.5 bits), Expect = 1.6e-25, Sum P(3) = 1.6e-25
Identities = 9/49 (18%), Positives = 17/49 (34%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEATK 378
R+ AP ++F R + ++L ++DG K
Sbjct: 567 RQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKK 615
Score = 39 (18.8 bits), Expect = 2.0e-24, Sum P(3) = 2.0e-24
Identities = 10/24 (41%), Positives = 12/24 (50%)
Query: 72 VDEAIKSSEGFKPYYVTKIEELQL 95
VDEAI K++ELQL
Sbjct: 28 VDEAINEDNSVVSLSQPKMDELQL 51
Score = 39 (18.8 bits), Expect = 3.7e-20, Sum P(3) = 3.7e-20
Identities = 10/43 (23%), Positives = 21/43 (48%)
Query: 72 VDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRL--QAQRN 112
+ A+ + G + + E + + E E NLR+ +A++N
Sbjct: 254 IARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKN 296
>MGI|MGI:99919 [details] [associations]
symbol:Vcp "valosin containing protein" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=ISO] [GO:0005102
"receptor binding" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005829
"cytosol" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IGI]
[GO:0006810 "transport" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=ISO] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0008289 "lipid binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=ISO] [GO:0019903 "protein phosphatase binding"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0019985 "translesion synthesis" evidence=ISO]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISO] [GO:0031334 "positive regulation of protein complex
assembly" evidence=ISO] [GO:0031593 "polyubiquitin binding"
evidence=ISO;IDA] [GO:0032403 "protein complex binding"
evidence=ISO] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0035861 "site of double-strand break" evidence=ISO] [GO:0042802
"identical protein binding" evidence=ISO] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0043234 "protein complex" evidence=IPI] [GO:0043531 "ADP
binding" evidence=ISO] [GO:0045732 "positive regulation of protein
catabolic process" evidence=ISO] [GO:0051260 "protein
homooligomerization" evidence=ISO] [GO:0070842 "aggresome assembly"
evidence=IGI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 MGI:MGI:99919 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0043234 GO:GO:0031334 GO:GO:0051260 GO:GO:0016887
GO:GO:0016567 GO:GO:0008289 GO:GO:0006919 GO:GO:0030433
GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279
GO:GO:0031593 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
GO:GO:0030970 GeneTree:ENSGT00700000104534 EMBL:AL672276
GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 PDB:2PJH PDBsum:2PJH
PDB:1S3S PDBsum:1S3S HOVERGEN:HBG001226 CTD:7415 OrthoDB:EOG45TCMK
ChiTaRS:VCP EMBL:Z14044 EMBL:AK028264 EMBL:AK030751 EMBL:AK149931
EMBL:AK151109 EMBL:AK151418 EMBL:AK153249 EMBL:AK159177
EMBL:AK159509 EMBL:AK167794 EMBL:AK169140 EMBL:BC043053
EMBL:BC049114 IPI:IPI00622235 PIR:S25197 RefSeq:NP_033529.3
UniGene:Mm.245976 PDB:1E32 PDB:1R7R PDB:3CF0 PDB:3CF1 PDB:3CF2
PDB:3CF3 PDBsum:1E32 PDBsum:1R7R PDBsum:3CF0 PDBsum:3CF1
PDBsum:3CF2 PDBsum:3CF3 DisProt:DP00435 ProteinModelPortal:Q01853
SMR:Q01853 DIP:DIP-29796N IntAct:Q01853 MINT:MINT-220770
STRING:Q01853 PhosphoSite:Q01853 REPRODUCTION-2DPAGE:Q01853
UCD-2DPAGE:Q01853 PaxDb:Q01853 PRIDE:Q01853
Ensembl:ENSMUST00000030164 GeneID:269523 KEGG:mmu:269523
UCSC:uc008sor.2 InParanoid:Q01853 BindingDB:Q01853
EvolutionaryTrace:Q01853 NextBio:392876 Bgee:Q01853 CleanEx:MM_VCP
Genevestigator:Q01853 GermOnline:ENSMUSG00000028452 Uniprot:Q01853
Length = 806
Score = 255 (94.8 bits), Expect = 2.0e-24, Sum P(3) = 2.0e-24
Identities = 45/95 (47%), Positives = 67/95 (70%)
Query: 203 EKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 262
E + + Y+ +GG Q+ +IKE++ELP++HP LF A+G+ P+G+LLYGPPGTGKTL+A
Sbjct: 196 ESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIA 255
Query: 263 RAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 297
RAVA+ T F ++G E++ K GE +R+ F
Sbjct: 256 RAVANETGAFFFLINGPEIMSKLAGESESNLRKAF 290
Score = 241 (89.9 bits), Expect = 1.6e-25, Sum P(3) = 1.6e-25
Identities = 44/96 (45%), Positives = 66/96 (68%)
Query: 202 VEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLL 261
V +VP T+E +GGL++ +E++E+++ PV+HP+ F G+ KGVL YGPPG GKTLL
Sbjct: 468 VVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLL 527
Query: 262 ARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 297
A+A+A+ + FI + G EL+ + GE VRE+F
Sbjct: 528 AKAIANECQANFISIKGPELLTMWFGESEANVREIF 563
Score = 91 (37.1 bits), Expect = 1.6e-25, Sum P(3) = 1.6e-25
Identities = 18/42 (42%), Positives = 27/42 (64%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 53
+GKTL+ARAVA+ T F ++G E++ K GE +R+ F
Sbjct: 249 TGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAF 290
Score = 41 (19.5 bits), Expect = 1.6e-25, Sum P(3) = 1.6e-25
Identities = 9/49 (18%), Positives = 17/49 (34%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEATK 378
R+ AP ++F R + ++L ++DG K
Sbjct: 567 RQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKK 615
Score = 39 (18.8 bits), Expect = 2.0e-24, Sum P(3) = 2.0e-24
Identities = 10/24 (41%), Positives = 12/24 (50%)
Query: 72 VDEAIKSSEGFKPYYVTKIEELQL 95
VDEAI K++ELQL
Sbjct: 28 VDEAINEDNSVVSLSQPKMDELQL 51
Score = 39 (18.8 bits), Expect = 3.7e-20, Sum P(3) = 3.7e-20
Identities = 10/43 (23%), Positives = 21/43 (48%)
Query: 72 VDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRL--QAQRN 112
+ A+ + G + + E + + E E NLR+ +A++N
Sbjct: 254 IARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKN 296
>RGD|621595 [details] [associations]
symbol:Vcp "valosin-containing protein" species:10116 "Rattus
norvegicus" [GO:0000502 "proteasome complex" evidence=IEA;ISO]
[GO:0005102 "receptor binding" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IDA;IMP]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005783 "endoplasmic reticulum" evidence=ISO;IDA]
[GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0006200 "ATP catabolic
process" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=ISO;ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IMP] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IEA;ISO] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO;ISS] [GO:0008289 "lipid binding"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO;ISS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0018279 "protein N-linked glycosylation via asparagine"
evidence=ISO;ISS] [GO:0019903 "protein phosphatase binding"
evidence=IEA;ISO] [GO:0019904 "protein domain specific binding"
evidence=IEA;ISO] [GO:0019985 "translesion synthesis"
evidence=ISO;ISS] [GO:0030433 "ER-associated protein catabolic
process" evidence=ISO;ISS] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IEA;ISO] [GO:0031334 "positive
regulation of protein complex assembly" evidence=IEA;ISO]
[GO:0031593 "polyubiquitin binding" evidence=IEA;ISO] [GO:0032403
"protein complex binding" evidence=IPI] [GO:0032436 "positive
regulation of proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO;IMP] [GO:0035861 "site of double-strand
break" evidence=ISO;ISS] [GO:0042802 "identical protein binding"
evidence=IDA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] [GO:0043234 "protein complex"
evidence=ISO] [GO:0043531 "ADP binding" evidence=IMP] [GO:0045732
"positive regulation of protein catabolic process" evidence=ISO]
[GO:0051260 "protein homooligomerization" evidence=IDA] [GO:0070842
"aggresome assembly" evidence=IEA;ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 RGD:621595 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0031334 GO:GO:0051260 GO:GO:0005102 GO:GO:0016887
GO:GO:0016567 GO:GO:0042802 GO:GO:0008289 GO:GO:0006919
GO:GO:0030433 GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464
GO:GO:0018279 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:U11760 EMBL:BC060518
IPI:IPI00212014 PIR:A55190 RefSeq:NP_446316.1 UniGene:Rn.98891
ProteinModelPortal:P46462 SMR:P46462 IntAct:P46462
MINT:MINT-1954391 STRING:P46462 PhosphoSite:P46462
World-2DPAGE:0004:P46462 PRIDE:P46462 Ensembl:ENSRNOT00000046102
GeneID:116643 KEGG:rno:116643 UCSC:RGD:621595 InParanoid:P46462
NextBio:619375 Genevestigator:P46462 GermOnline:ENSRNOG00000034242
Uniprot:P46462
Length = 806
Score = 255 (94.8 bits), Expect = 2.0e-24, Sum P(3) = 2.0e-24
Identities = 45/95 (47%), Positives = 67/95 (70%)
Query: 203 EKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 262
E + + Y+ +GG Q+ +IKE++ELP++HP LF A+G+ P+G+LLYGPPGTGKTL+A
Sbjct: 196 ESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIA 255
Query: 263 RAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 297
RAVA+ T F ++G E++ K GE +R+ F
Sbjct: 256 RAVANETGAFFFLINGPEIMSKLAGESESNLRKAF 290
Score = 241 (89.9 bits), Expect = 1.6e-25, Sum P(3) = 1.6e-25
Identities = 44/96 (45%), Positives = 66/96 (68%)
Query: 202 VEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLL 261
V +VP T+E +GGL++ +E++E+++ PV+HP+ F G+ KGVL YGPPG GKTLL
Sbjct: 468 VVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLL 527
Query: 262 ARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 297
A+A+A+ + FI + G EL+ + GE VRE+F
Sbjct: 528 AKAIANECQANFISIKGPELLTMWFGESEANVREIF 563
Score = 91 (37.1 bits), Expect = 1.6e-25, Sum P(3) = 1.6e-25
Identities = 18/42 (42%), Positives = 27/42 (64%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 53
+GKTL+ARAVA+ T F ++G E++ K GE +R+ F
Sbjct: 249 TGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAF 290
Score = 41 (19.5 bits), Expect = 1.6e-25, Sum P(3) = 1.6e-25
Identities = 9/49 (18%), Positives = 17/49 (34%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEATK 378
R+ AP ++F R + ++L ++DG K
Sbjct: 567 RQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKK 615
Score = 39 (18.8 bits), Expect = 2.0e-24, Sum P(3) = 2.0e-24
Identities = 10/24 (41%), Positives = 12/24 (50%)
Query: 72 VDEAIKSSEGFKPYYVTKIEELQL 95
VDEAI K++ELQL
Sbjct: 28 VDEAINEDNSVVSLSQPKMDELQL 51
Score = 39 (18.8 bits), Expect = 3.7e-20, Sum P(3) = 3.7e-20
Identities = 10/43 (23%), Positives = 21/43 (48%)
Query: 72 VDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRL--QAQRN 112
+ A+ + G + + E + + E E NLR+ +A++N
Sbjct: 254 IARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKN 296
>UNIPROTKB|F1SIH8 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
EMBL:FP102396 Ensembl:ENSSSCT00000005837 ArrayExpress:F1SIH8
Uniprot:F1SIH8
Length = 808
Score = 255 (94.8 bits), Expect = 2.0e-24, Sum P(3) = 2.0e-24
Identities = 45/95 (47%), Positives = 67/95 (70%)
Query: 203 EKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 262
E + + Y+ +GG Q+ +IKE++ELP++HP LF A+G+ P+G+LLYGPPGTGKTL+A
Sbjct: 196 ESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIA 255
Query: 263 RAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 297
RAVA+ T F ++G E++ K GE +R+ F
Sbjct: 256 RAVANETGAFFFLINGPEIMSKLAGESESNLRKAF 290
Score = 241 (89.9 bits), Expect = 1.6e-25, Sum P(3) = 1.6e-25
Identities = 44/96 (45%), Positives = 66/96 (68%)
Query: 202 VEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLL 261
V +VP T+E +GGL++ +E++E+++ PV+HP+ F G+ KGVL YGPPG GKTLL
Sbjct: 468 VVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLL 527
Query: 262 ARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 297
A+A+A+ + FI + G EL+ + GE VRE+F
Sbjct: 528 AKAIANECQANFISIKGPELLTMWFGESEANVREIF 563
Score = 91 (37.1 bits), Expect = 1.6e-25, Sum P(3) = 1.6e-25
Identities = 18/42 (42%), Positives = 27/42 (64%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 53
+GKTL+ARAVA+ T F ++G E++ K GE +R+ F
Sbjct: 249 TGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAF 290
Score = 41 (19.5 bits), Expect = 1.6e-25, Sum P(3) = 1.6e-25
Identities = 9/49 (18%), Positives = 17/49 (34%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEATK 378
R+ AP ++F R + ++L ++DG K
Sbjct: 567 RQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKK 615
Score = 39 (18.8 bits), Expect = 2.0e-24, Sum P(3) = 2.0e-24
Identities = 10/24 (41%), Positives = 12/24 (50%)
Query: 72 VDEAIKSSEGFKPYYVTKIEELQL 95
VDEAI K++ELQL
Sbjct: 28 VDEAINEDNSVVSLSQPKMDELQL 51
Score = 39 (18.8 bits), Expect = 3.7e-20, Sum P(3) = 3.7e-20
Identities = 10/43 (23%), Positives = 21/43 (48%)
Query: 72 VDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRL--QAQRN 112
+ A+ + G + + E + + E E NLR+ +A++N
Sbjct: 254 IARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKN 296
>UNIPROTKB|F1P4V8 [details] [associations]
symbol:LOC426240 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
EMBL:AADN02060646 EMBL:AADN02060647 EMBL:AADN02060648
EMBL:AADN02060649 EMBL:AADN02060650 EMBL:AADN02060651
EMBL:AADN02060652 EMBL:AADN02060653 IPI:IPI00585183
Ensembl:ENSGALT00000003093 ArrayExpress:F1P4V8 Uniprot:F1P4V8
Length = 810
Score = 255 (94.8 bits), Expect = 1.6e-24, Sum P(3) = 1.6e-24
Identities = 45/95 (47%), Positives = 67/95 (70%)
Query: 203 EKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 262
E + + Y+ +GG Q+ +IKE++ELP++HP LF A+G+ P+G+LLYGPPGTGKTL+A
Sbjct: 196 ESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIA 255
Query: 263 RAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 297
RAVA+ T F ++G E++ K GE +R+ F
Sbjct: 256 RAVANETGAFFFLINGPEIMSKLAGESESNLRKAF 290
Score = 241 (89.9 bits), Expect = 1.7e-25, Sum P(3) = 1.7e-25
Identities = 44/96 (45%), Positives = 66/96 (68%)
Query: 202 VEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLL 261
V +VP T+E +GGL++ +E++E+++ PV+HP+ F G+ KGVL YGPPG GKTLL
Sbjct: 472 VVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLL 531
Query: 262 ARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 297
A+A+A+ + FI + G EL+ + GE VRE+F
Sbjct: 532 AKAIANECQANFISIKGPELLTMWFGESEANVREIF 567
Score = 91 (37.1 bits), Expect = 1.7e-25, Sum P(3) = 1.7e-25
Identities = 18/42 (42%), Positives = 27/42 (64%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 53
+GKTL+ARAVA+ T F ++G E++ K GE +R+ F
Sbjct: 249 TGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAF 290
Score = 41 (19.5 bits), Expect = 1.7e-25, Sum P(3) = 1.7e-25
Identities = 9/49 (18%), Positives = 17/49 (34%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEATK 378
R+ AP ++F R + ++L ++DG K
Sbjct: 571 RQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKK 619
Score = 40 (19.1 bits), Expect = 1.6e-24, Sum P(3) = 1.6e-24
Identities = 10/24 (41%), Positives = 12/24 (50%)
Query: 72 VDEAIKSSEGFKPYYVTKIEELQL 95
VDEAI K++ELQL
Sbjct: 28 VDEAINEDNSVVSLSQAKMDELQL 51
Score = 38 (18.4 bits), Expect = 4.8e-20, Sum P(3) = 4.8e-20
Identities = 11/45 (24%), Positives = 20/45 (44%)
Query: 72 VDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNELNA 116
+ A+ + G + + E + + E E NLR+ + E NA
Sbjct: 254 IARAVANETGAFFFLINGPEIMSKLAGESESNLRKA-FEETEKNA 297
>UNIPROTKB|E2RLQ9 [details] [associations]
symbol:VCP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070842 "aggresome assembly" evidence=IEA]
[GO:0045732 "positive regulation of protein catabolic process"
evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 EMBL:AAEX03007949 Ensembl:ENSCAFT00000003151
NextBio:20856352 Uniprot:E2RLQ9
Length = 822
Score = 255 (94.8 bits), Expect = 2.2e-24, Sum P(3) = 2.2e-24
Identities = 45/95 (47%), Positives = 67/95 (70%)
Query: 203 EKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 262
E + + Y+ +GG Q+ +IKE++ELP++HP LF A+G+ P+G+LLYGPPGTGKTL+A
Sbjct: 212 ESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIA 271
Query: 263 RAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 297
RAVA+ T F ++G E++ K GE +R+ F
Sbjct: 272 RAVANETGAFFFLINGPEIMSKLAGESESNLRKAF 306
Score = 241 (89.9 bits), Expect = 1.8e-25, Sum P(3) = 1.8e-25
Identities = 44/96 (45%), Positives = 66/96 (68%)
Query: 202 VEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLL 261
V +VP T+E +GGL++ +E++E+++ PV+HP+ F G+ KGVL YGPPG GKTLL
Sbjct: 484 VVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLL 543
Query: 262 ARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 297
A+A+A+ + FI + G EL+ + GE VRE+F
Sbjct: 544 AKAIANECQANFISIKGPELLTMWFGESEANVREIF 579
Score = 91 (37.1 bits), Expect = 1.8e-25, Sum P(3) = 1.8e-25
Identities = 18/42 (42%), Positives = 27/42 (64%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 53
+GKTL+ARAVA+ T F ++G E++ K GE +R+ F
Sbjct: 265 TGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAF 306
Score = 41 (19.5 bits), Expect = 1.8e-25, Sum P(3) = 1.8e-25
Identities = 9/49 (18%), Positives = 17/49 (34%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEATK 378
R+ AP ++F R + ++L ++DG K
Sbjct: 583 RQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKK 631
Score = 39 (18.8 bits), Expect = 2.2e-24, Sum P(3) = 2.2e-24
Identities = 10/24 (41%), Positives = 12/24 (50%)
Query: 72 VDEAIKSSEGFKPYYVTKIEELQL 95
VDEAI K++ELQL
Sbjct: 44 VDEAINEDNSVVSLSQPKMDELQL 67
Score = 39 (18.8 bits), Expect = 4.0e-20, Sum P(3) = 4.0e-20
Identities = 10/43 (23%), Positives = 21/43 (48%)
Query: 72 VDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRL--QAQRN 112
+ A+ + G + + E + + E E NLR+ +A++N
Sbjct: 270 IARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKN 312
>UNIPROTKB|P23787 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8355 "Xenopus laevis" [GO:0000785 "chromatin" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0006974
"response to DNA damage stimulus" evidence=ISS] [GO:0016567
"protein ubiquitination" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=IDA] [GO:0018279 "protein N-linked glycosylation
via asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0032403 "protein complex binding" evidence=IPI]
[GO:0034214 "protein hexamerization" evidence=IDA] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0035101 "FACT
complex" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226 CTD:7415 EMBL:X54240
EMBL:BC046949 PIR:S19738 RefSeq:NP_001095217.1 UniGene:Xl.8775
ProteinModelPortal:P23787 SMR:P23787 PRIDE:P23787 GeneID:380491
KEGG:xla:380491 Xenbase:XB-GENE-969578 Uniprot:P23787
Length = 805
Score = 255 (94.8 bits), Expect = 3.1e-24, Sum P(3) = 3.1e-24
Identities = 45/95 (47%), Positives = 67/95 (70%)
Query: 203 EKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 262
E + + Y+ +GG Q+ +IKE++ELP++HP LF A+G+ P+G+LLYGPPGTGKTL+A
Sbjct: 196 ESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIA 255
Query: 263 RAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 297
RAVA+ T F ++G E++ K GE +R+ F
Sbjct: 256 RAVANETGAFFFLINGPEIMSKLAGESESNLRKAF 290
Score = 241 (89.9 bits), Expect = 2.0e-25, Sum P(3) = 2.0e-25
Identities = 44/96 (45%), Positives = 66/96 (68%)
Query: 202 VEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLL 261
V +VP T+E +GGL++ +E++E+++ PV+HP+ F G+ KGVL YGPPG GKTLL
Sbjct: 468 VVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLL 527
Query: 262 ARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 297
A+A+A+ + FI + G EL+ + GE VRE+F
Sbjct: 528 AKAIANECQANFISIKGPELLTMWFGESEANVREIF 563
Score = 91 (37.1 bits), Expect = 2.0e-25, Sum P(3) = 2.0e-25
Identities = 18/42 (42%), Positives = 27/42 (64%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 53
+GKTL+ARAVA+ T F ++G E++ K GE +R+ F
Sbjct: 249 TGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAF 290
Score = 40 (19.1 bits), Expect = 2.0e-25, Sum P(3) = 2.0e-25
Identities = 9/49 (18%), Positives = 17/49 (34%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEATK 378
R+ AP ++F R + ++L ++DG K
Sbjct: 567 RQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSIKK 615
Score = 39 (18.8 bits), Expect = 4.6e-20, Sum P(3) = 4.6e-20
Identities = 10/43 (23%), Positives = 21/43 (48%)
Query: 72 VDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRL--QAQRN 112
+ A+ + G + + E + + E E NLR+ +A++N
Sbjct: 254 IARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKN 296
Score = 38 (18.4 bits), Expect = 3.1e-24, Sum P(3) = 3.1e-24
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 72 VDEAIKSSEGFKPYYVTKIEELQL 95
VDE+I K++ELQL
Sbjct: 28 VDESINEDNSMVSLSQAKMDELQL 51
>SGD|S000002284 [details] [associations]
symbol:CDC48 "AAA ATPase involved in multiple processes"
species:4932 "Saccharomyces cerevisiae" [GO:0005829 "cytosol"
evidence=IDA] [GO:0043332 "mating projection tip" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0030433 "ER-associated protein catabolic process"
evidence=IMP] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IEA] [GO:1900182 "positive regulation of
protein localization to nucleus" evidence=IMP] [GO:0051228 "mitotic
spindle disassembly" evidence=IMP] [GO:0016320 "endoplasmic
reticulum membrane fusion" evidence=IMP] [GO:0034517 "ribophagy"
evidence=IMP] [GO:0071712 "ER-associated misfolded protein
catabolic process" evidence=IMP] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IMP] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IDA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0043130 "ubiquitin binding" evidence=IDA]
[GO:0036266 "Cdc48p-Npl4p-Vms1p AAA ATPase complex" evidence=IDA]
[GO:0071630 "nucleus-associated proteasomal ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IMP] [GO:0016236
"macroautophagy" evidence=IMP] [GO:0031134 "sister chromatid
biorientation" evidence=IMP] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0072671 "mitochondria-associated protein
catabolic process" evidence=IMP] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 SGD:S000002284 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0043332
EMBL:BK006938 GO:GO:0016887 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0016236 GO:GO:0031134
GO:GO:0043130 GO:GO:0034727 GO:GO:0016320 GO:GO:0034517
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OrthoDB:EOG47H8Z3 GO:GO:0034098 GO:GO:0030970
EMBL:X56956 EMBL:Z74174 PIR:S67669 RefSeq:NP_010157.1
ProteinModelPortal:P25694 SMR:P25694 DIP:DIP-2704N IntAct:P25694
MINT:MINT-547129 STRING:P25694 TCDB:3.A.16.1.2 PaxDb:P25694
PeptideAtlas:P25694 PRIDE:P25694 EnsemblFungi:YDL126C GeneID:851431
KEGG:sce:YDL126C CYGD:YDL126c GeneTree:ENSGT00700000104534
OMA:TIPRITW NextBio:968654 Genevestigator:P25694 GermOnline:YDL126C
GO:GO:0036266 GO:GO:0000837 GO:GO:0071629 GO:GO:0071712
GO:GO:0072671 GO:GO:0051228 GO:GO:0071630 GO:GO:1900182
Uniprot:P25694
Length = 835
Score = 251 (93.4 bits), Expect = 9.0e-23, Sum P(2) = 9.0e-23
Identities = 44/88 (50%), Positives = 65/88 (73%)
Query: 210 YEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 269
Y+ +GG Q+ +I+E++ELP++HP+LF A+GI P+GVL+YGPPGTGKTL+ARAVA+ T
Sbjct: 213 YDDIGGCRKQMAQIREMVELPLRHPQLFKAIGIKPPRGVLMYGPPGTGKTLMARAVANET 272
Query: 270 ECTFIRVSGSELVQKFIGEGSRMVRELF 297
F ++G E++ K GE +R+ F
Sbjct: 273 GAFFFLINGPEVMSKMAGESESNLRKAF 300
Score = 237 (88.5 bits), Expect = 3.5e-25, Sum P(3) = 3.5e-25
Identities = 47/97 (48%), Positives = 64/97 (65%)
Query: 201 MVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTL 260
+VE V + T++ VGGLD +E+KE +E PV HP+ + G++ KGVL YGPPGTGKTL
Sbjct: 478 VVESV-NVTWDDVGGLDEIKEELKETVEYPVLHPDQYTKFGLSPSKGVLFYGPPGTGKTL 536
Query: 261 LARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 297
LA+AVA FI V G EL+ + GE +R++F
Sbjct: 537 LAKAVATEVSANFISVKGPELLSMWYGESESNIRDIF 573
Score = 90 (36.7 bits), Expect = 3.5e-25, Sum P(3) = 3.5e-25
Identities = 18/42 (42%), Positives = 27/42 (64%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 53
+GKTL+ARAVA+ T F ++G E++ K GE +R+ F
Sbjct: 259 TGKTLMARAVANETGAFFFLINGPEVMSKMAGESESNLRKAF 300
Score = 49 (22.3 bits), Expect = 3.5e-25, Sum P(3) = 3.5e-25
Identities = 11/49 (22%), Positives = 19/49 (38%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEATK 378
R AP+++F+ R + +LL ++DG A K
Sbjct: 577 RAAAPTVVFLDELDSIAKARGGSLGDAGGASDRVVNQLLTEMDGMNAKK 625
Score = 38 (18.4 bits), Expect = 8.0e-20, Sum P(3) = 8.0e-20
Identities = 10/40 (25%), Positives = 20/40 (50%)
Query: 75 AIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRL--QAQRN 112
A+ + G + + E + + E E NLR+ +A++N
Sbjct: 267 AVANETGAFFFLINGPEVMSKMAGESESNLRKAFEEAEKN 306
>UNIPROTKB|P03974 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0035861 "site of double-strand break" evidence=ISS] [GO:0006302
"double-strand break repair" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 eggNOG:COG0464
GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:M30143 PIR:A26360
RefSeq:NP_999445.1 UniGene:Ssc.856 ProteinModelPortal:P03974
SMR:P03974 STRING:P03974 GeneID:397524 KEGG:ssc:397524
Uniprot:P03974
Length = 806
Score = 255 (94.8 bits), Expect = 2.0e-24, Sum P(3) = 2.0e-24
Identities = 45/95 (47%), Positives = 67/95 (70%)
Query: 203 EKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 262
E + + Y+ +GG Q+ +IKE++ELP++HP LF A+G+ P+G+LLYGPPGTGKTL+A
Sbjct: 196 ESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIA 255
Query: 263 RAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 297
RAVA+ T F ++G E++ K GE +R+ F
Sbjct: 256 RAVANETGAFFFLINGPEIMSKLAGESESNLRKAF 290
Score = 238 (88.8 bits), Expect = 9.9e-25, Sum P(3) = 9.9e-25
Identities = 43/96 (44%), Positives = 66/96 (68%)
Query: 202 VEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLL 261
V +VP T+E +GGL++ +E++++++ PV+HP+ F G+ KGVL YGPPG GKTLL
Sbjct: 468 VVEVPQVTWEDIGGLEDVKRELQDLVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLL 527
Query: 262 ARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 297
A+A+A+ + FI + G EL+ + GE VRE+F
Sbjct: 528 AKAIANECQANFISIKGPELLTMWFGESEANVREIF 563
Score = 91 (37.1 bits), Expect = 9.9e-25, Sum P(3) = 9.9e-25
Identities = 18/42 (42%), Positives = 27/42 (64%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 53
+GKTL+ARAVA+ T F ++G E++ K GE +R+ F
Sbjct: 249 TGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAF 290
Score = 41 (19.5 bits), Expect = 9.9e-25, Sum P(3) = 9.9e-25
Identities = 9/49 (18%), Positives = 17/49 (34%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEATK 378
R+ AP ++F R + ++L ++DG K
Sbjct: 567 RQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKK 615
Score = 39 (18.8 bits), Expect = 2.0e-24, Sum P(3) = 2.0e-24
Identities = 10/24 (41%), Positives = 12/24 (50%)
Query: 72 VDEAIKSSEGFKPYYVTKIEELQL 95
VDEAI K++ELQL
Sbjct: 28 VDEAINEDNSVVSLSQPKMDELQL 51
Score = 39 (18.8 bits), Expect = 2.2e-19, Sum P(3) = 2.2e-19
Identities = 10/43 (23%), Positives = 21/43 (48%)
Query: 72 VDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRL--QAQRN 112
+ A+ + G + + E + + E E NLR+ +A++N
Sbjct: 254 IARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKN 296
>ZFIN|ZDB-GENE-060312-22 [details] [associations]
symbol:zgc:136908 "zgc:136908" species:7955 "Danio
rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 ZFIN:ZDB-GENE-060312-22
GO:GO:0005524 eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 HOGENOM:HOG000223224
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 HOVERGEN:HBG001226 EMBL:CU571167
EMBL:BC114306 IPI:IPI00835697 RefSeq:NP_001035017.1
UniGene:Dr.47664 SMR:Q29RA2 STRING:Q29RA2
Ensembl:ENSDART00000100551 GeneID:563679 KEGG:dre:563679
InParanoid:Q29RA2 OrthoDB:EOG4WWRMB NextBio:20885016 Uniprot:Q29RA2
Length = 805
Score = 258 (95.9 bits), Expect = 1.5e-24, Sum P(3) = 1.5e-24
Identities = 46/95 (48%), Positives = 67/95 (70%)
Query: 203 EKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 262
E + D Y+ +GG Q+ +IKE++ELP++HP LF A+G+ P+G+LLYGPPGTGKTL+A
Sbjct: 198 ESLNDIGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLVA 257
Query: 263 RAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 297
RAVA+ T F ++G E++ K GE +R+ F
Sbjct: 258 RAVANETGAFFFLINGPEIMSKLAGESESNLRKAF 292
Score = 224 (83.9 bits), Expect = 5.4e-22, Sum P(3) = 5.4e-22
Identities = 40/96 (41%), Positives = 64/96 (66%)
Query: 202 VEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLL 261
V +VP +E +GGLD +E++E+++ PV++P+ F G+ +GVL YGPPG GKTLL
Sbjct: 470 VVEVPHVNWEDIGGLDEVKRELQELVQYPVEYPDKFLKFGMTPSRGVLFYGPPGCGKTLL 529
Query: 262 ARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 297
A+A+A+ + F+ + G EL+ + GE VR++F
Sbjct: 530 AKAIANECQANFVSIKGPELLTMWFGESEANVRDVF 565
Score = 90 (36.7 bits), Expect = 5.4e-22, Sum P(3) = 5.4e-22
Identities = 18/42 (42%), Positives = 27/42 (64%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 53
+GKTL+ARAVA+ T F ++G E++ K GE +R+ F
Sbjct: 251 TGKTLVARAVANETGAFFFLINGPEIMSKLAGESESNLRKAF 292
Score = 41 (19.5 bits), Expect = 1.5e-24, Sum P(3) = 1.5e-24
Identities = 10/49 (20%), Positives = 17/49 (34%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEATK 378
R+ AP I+F R + ++L ++DG K
Sbjct: 569 RQAAPCILFFDELDSIAKARGGGAGDAGGAADRVINQILTEMDGMTNKK 617
Score = 40 (19.1 bits), Expect = 7.3e-17, Sum P(3) = 7.3e-17
Identities = 11/43 (25%), Positives = 21/43 (48%)
Query: 72 VDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRL--QAQRN 112
V A+ + G + + E + + E E NLR+ +A++N
Sbjct: 256 VARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKN 298
Score = 37 (18.1 bits), Expect = 1.5e-24, Sum P(3) = 1.5e-24
Identities = 10/24 (41%), Positives = 11/24 (45%)
Query: 72 VDEAIKSSEGFKPYYVTKIEELQL 95
VDEA K+EELQL
Sbjct: 30 VDEATNEDNSIVCLSQVKMEELQL 53
>WB|WBGene00008053 [details] [associations]
symbol:cdc-48.2 species:6239 "Caenorhabditis elegans"
[GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IGI] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 EMBL:Z48334 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 HOGENOM:HOG000223224
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z48045 PIR:T19879
RefSeq:NP_495705.1 ProteinModelPortal:P54812 SMR:P54812
DIP:DIP-26566N IntAct:P54812 MINT:MINT-1090535 STRING:P54812
PaxDb:P54812 PRIDE:P54812 EnsemblMetazoa:C41C4.8.1
EnsemblMetazoa:C41C4.8.2 EnsemblMetazoa:C41C4.8.3 GeneID:174309
KEGG:cel:CELE_C41C4.8 UCSC:C41C4.8.1 CTD:174309 WormBase:C41C4.8
InParanoid:P54812 OMA:ADRQDWE NextBio:883464 Uniprot:P54812
Length = 810
Score = 255 (94.8 bits), Expect = 1.3e-22, Sum P(2) = 1.3e-22
Identities = 46/104 (44%), Positives = 72/104 (69%)
Query: 194 DPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGP 253
DP+ E + + Y+ +GG+ Q+ +IKE++ELP++HP+LF A+G+ P+G+LL+GP
Sbjct: 192 DPIKREEEEEALNEVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLFGP 251
Query: 254 PGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 297
PGTGKTL+ARAVA+ T F ++G E++ K GE +R+ F
Sbjct: 252 PGTGKTLIARAVANETGAFFFLINGPEIMSKMSGESESNLRKAF 295
Score = 233 (87.1 bits), Expect = 1.8e-24, Sum P(3) = 1.8e-24
Identities = 47/122 (38%), Positives = 75/122 (61%)
Query: 176 VALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPE 235
V + N + + K P+ + V VE P++T+ +GGL N +E++E+++ PV+HPE
Sbjct: 452 VTMENFRFAMGKSSPSALREAV----VE-TPNTTWSDIGGLQNVKRELQELVQYPVEHPE 506
Query: 236 LFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRE 295
+ G+ +GVL YGPPG GKTLLA+A+A+ + FI + G EL+ + GE VR+
Sbjct: 507 KYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRD 566
Query: 296 LF 297
+F
Sbjct: 567 VF 568
Score = 97 (39.2 bits), Expect = 1.8e-24, Sum P(3) = 1.8e-24
Identities = 23/62 (37%), Positives = 36/62 (58%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTL+ARAVA+ T F ++G E++ K GE +R+ F A C+ +S F +
Sbjct: 254 TGKTLIARAVANETGAFFFLINGPEIMSKMSGESESNLRKAF--AECEKNSPAILFID-E 310
Query: 72 VD 73
+D
Sbjct: 311 ID 312
Score = 43 (20.2 bits), Expect = 1.8e-24, Sum P(3) = 1.8e-24
Identities = 10/49 (20%), Positives = 17/49 (34%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEATK 378
R AP ++F R + ++L ++DG A K
Sbjct: 572 RAAAPCVLFFDELDSIAKARGGSVGDAGGAADRVINQVLTEMDGMNAKK 620
>UNIPROTKB|P54812 [details] [associations]
symbol:cdc-48.2 "Transitional endoplasmic reticulum ATPase
homolog 2" species:6239 "Caenorhabditis elegans" [GO:0042802
"identical protein binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 EMBL:Z48334 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 HOGENOM:HOG000223224
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z48045 PIR:T19879
RefSeq:NP_495705.1 ProteinModelPortal:P54812 SMR:P54812
DIP:DIP-26566N IntAct:P54812 MINT:MINT-1090535 STRING:P54812
PaxDb:P54812 PRIDE:P54812 EnsemblMetazoa:C41C4.8.1
EnsemblMetazoa:C41C4.8.2 EnsemblMetazoa:C41C4.8.3 GeneID:174309
KEGG:cel:CELE_C41C4.8 UCSC:C41C4.8.1 CTD:174309 WormBase:C41C4.8
InParanoid:P54812 OMA:ADRQDWE NextBio:883464 Uniprot:P54812
Length = 810
Score = 255 (94.8 bits), Expect = 1.3e-22, Sum P(2) = 1.3e-22
Identities = 46/104 (44%), Positives = 72/104 (69%)
Query: 194 DPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGP 253
DP+ E + + Y+ +GG+ Q+ +IKE++ELP++HP+LF A+G+ P+G+LL+GP
Sbjct: 192 DPIKREEEEEALNEVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLFGP 251
Query: 254 PGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 297
PGTGKTL+ARAVA+ T F ++G E++ K GE +R+ F
Sbjct: 252 PGTGKTLIARAVANETGAFFFLINGPEIMSKMSGESESNLRKAF 295
Score = 233 (87.1 bits), Expect = 1.8e-24, Sum P(3) = 1.8e-24
Identities = 47/122 (38%), Positives = 75/122 (61%)
Query: 176 VALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPE 235
V + N + + K P+ + V VE P++T+ +GGL N +E++E+++ PV+HPE
Sbjct: 452 VTMENFRFAMGKSSPSALREAV----VE-TPNTTWSDIGGLQNVKRELQELVQYPVEHPE 506
Query: 236 LFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRE 295
+ G+ +GVL YGPPG GKTLLA+A+A+ + FI + G EL+ + GE VR+
Sbjct: 507 KYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRD 566
Query: 296 LF 297
+F
Sbjct: 567 VF 568
Score = 97 (39.2 bits), Expect = 1.8e-24, Sum P(3) = 1.8e-24
Identities = 23/62 (37%), Positives = 36/62 (58%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTL+ARAVA+ T F ++G E++ K GE +R+ F A C+ +S F +
Sbjct: 254 TGKTLIARAVANETGAFFFLINGPEIMSKMSGESESNLRKAF--AECEKNSPAILFID-E 310
Query: 72 VD 73
+D
Sbjct: 311 ID 312
Score = 43 (20.2 bits), Expect = 1.8e-24, Sum P(3) = 1.8e-24
Identities = 10/49 (20%), Positives = 17/49 (34%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEATK 378
R AP ++F R + ++L ++DG A K
Sbjct: 572 RAAAPCVLFFDELDSIAKARGGSVGDAGGAADRVINQVLTEMDGMNAKK 620
>ASPGD|ASPL0000069340 [details] [associations]
symbol:AN7254 species:162425 "Emericella nidulans"
[GO:0071470 "cellular response to osmotic stress" evidence=IEP]
[GO:0097308 "cellular response to farnesol" evidence=IEP]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0051228
"mitotic spindle disassembly" evidence=IEA] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=IEA] [GO:0034727
"piecemeal microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0043332 "mating projection tip" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0034098 "Cdc48p-Npl4p-Ufd1p
AAA ATPase complex" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0006950 GO:GO:0015031 GO:GO:0007049 EMBL:BN001304 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AACD01000124 RefSeq:XP_680523.1
STRING:Q5AWS6 PRIDE:Q5AWS6 GeneID:2869922 KEGG:ani:AN7254.2
OrthoDB:EOG47H8Z3 Uniprot:Q5AWS6
Length = 823
Score = 248 (92.4 bits), Expect = 7.6e-22, Sum P(2) = 7.6e-22
Identities = 42/88 (47%), Positives = 65/88 (73%)
Query: 210 YEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 269
Y+ +GG Q+ +I+E++ELP++HP+LF ++GI P+G+L+YGPPGTGKTL+ARAVA+ T
Sbjct: 224 YDDIGGCRKQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVANET 283
Query: 270 ECTFIRVSGSELVQKFIGEGSRMVRELF 297
F ++G E++ K GE +R+ F
Sbjct: 284 GAFFFLINGPEIMSKMAGESESNLRKAF 311
Score = 235 (87.8 bits), Expect = 3.1e-24, Sum P(3) = 3.1e-24
Identities = 50/122 (40%), Positives = 73/122 (59%)
Query: 176 VALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPE 235
V + N Y L P+ L + +VE VP+ +E +GGL+ +E+ E ++ PV HPE
Sbjct: 468 VTMENFRYALGVSNPSA---LREVAVVE-VPNVRWEDIGGLEEVKRELIESVQYPVDHPE 523
Query: 236 LFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRE 295
F G++ +GVL YGPPGTGKT+LA+AVA+ FI V G EL+ + GE +R+
Sbjct: 524 KFQKFGLSPSRGVLFYGPPGTGKTMLAKAVANECAANFISVKGPELLSMWFGESESNIRD 583
Query: 296 LF 297
+F
Sbjct: 584 IF 585
Score = 91 (37.1 bits), Expect = 3.1e-24, Sum P(3) = 3.1e-24
Identities = 18/42 (42%), Positives = 27/42 (64%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 53
+GKTL+ARAVA+ T F ++G E++ K GE +R+ F
Sbjct: 270 TGKTLMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAF 311
Score = 43 (20.2 bits), Expect = 3.1e-24, Sum P(3) = 3.1e-24
Identities = 10/49 (20%), Positives = 18/49 (36%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEATK 378
R AP ++F+ R + +LL ++DG + K
Sbjct: 589 RAAAPCVVFLDELDSIAKSRGGSVGDAGGASDRVVNQLLTEMDGMTSKK 637
>UNIPROTKB|G4N517 [details] [associations]
symbol:MGG_05193 "Cell division control protein 48"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0051301 EMBL:CM001233 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0043581 KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
RefSeq:XP_003712735.1 ProteinModelPortal:G4N517 SMR:G4N517
EnsemblFungi:MGG_05193T0 GeneID:2675720 KEGG:mgr:MGG_05193
Uniprot:G4N517
Length = 820
Score = 251 (93.4 bits), Expect = 2.8e-22, Sum P(2) = 2.8e-22
Identities = 44/88 (50%), Positives = 65/88 (73%)
Query: 210 YEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 269
Y+ +GG Q+ +I+E++ELP++HP+LF ++GI P+GVLLYGPPGTGKTL+ARAVA+ T
Sbjct: 221 YDDIGGCRKQMAQIREMVELPLRHPQLFKSIGIKPPRGVLLYGPPGTGKTLMARAVANET 280
Query: 270 ECTFIRVSGSELVQKFIGEGSRMVRELF 297
F ++G E++ K GE +R+ F
Sbjct: 281 GAFFFLINGPEIMSKMAGESESNLRKAF 308
Score = 233 (87.1 bits), Expect = 6.3e-24, Sum P(3) = 6.3e-24
Identities = 43/96 (44%), Positives = 64/96 (66%)
Query: 202 VEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLL 261
V +VP+ +E +GGLD ++++E ++ PV HPE F G++ +GVL YGPPGTGKT+L
Sbjct: 487 VVEVPNVRWEDIGGLDEVKQDLREQVQYPVDHPEKFLKFGLSPSRGVLFYGPPGTGKTML 546
Query: 262 ARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 297
A+AVA+ FI V G EL+ + GE +R++F
Sbjct: 547 AKAVANECAANFISVKGPELLSMWFGESESNIRDIF 582
Score = 91 (37.1 bits), Expect = 6.3e-24, Sum P(3) = 6.3e-24
Identities = 18/42 (42%), Positives = 27/42 (64%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 53
+GKTL+ARAVA+ T F ++G E++ K GE +R+ F
Sbjct: 267 TGKTLMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAF 308
Score = 44 (20.5 bits), Expect = 6.3e-24, Sum P(3) = 6.3e-24
Identities = 11/49 (22%), Positives = 18/49 (36%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEATK 378
R AP I+F+ R + +LL ++DG + K
Sbjct: 586 RAAAPCIVFLDELDSIAKARGGSVGDAGGASDRVVNQLLTEMDGMTSKK 634
>POMBASE|SPBC16E9.10c [details] [associations]
symbol:SPBC16E9.10c "AAA family ATPase Rix7
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000055
"ribosomal large subunit export from nucleus" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IC] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=ISO] [GO:0016887
"ATPase activity" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC16E9.10c GO:GO:0005524 GO:GO:0005730
EMBL:CU329671 GO:GO:0016887 HSSP:Q01853 eggNOG:COG0464
HOGENOM:HOG000223225 GO:GO:0000055 KO:K14571 OMA:NDMTLKE
OrthoDB:EOG40GH00 PIR:T39584 RefSeq:NP_595792.1
ProteinModelPortal:O14325 STRING:O14325 EnsemblFungi:SPBC16E9.10c.1
GeneID:2539968 KEGG:spo:SPBC16E9.10c NextBio:20801111
Uniprot:O14325
Length = 779
Score = 238 (88.8 bits), Expect = 7.7e-23, Sum P(2) = 7.7e-23
Identities = 47/109 (43%), Positives = 70/109 (64%)
Query: 192 KVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLY 251
KV P VP ++ +G L + E++ I P+K PEL+ ++GI+ P GVLL+
Sbjct: 473 KVQPSSKREGFATVPGVSWNNIGALKSIRVELQMAIVQPIKRPELYQSVGISAPTGVLLW 532
Query: 252 GPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
GPPG GKTLLA+AVA+ ++ FI + G EL+ K++GE R VR++F+ A
Sbjct: 533 GPPGCGKTLLAKAVANESKANFISIRGPELLNKYVGESERAVRQVFLRA 581
Score = 224 (83.9 bits), Expect = 6.2e-16, P = 6.2e-16
Identities = 46/104 (44%), Positives = 65/104 (62%)
Query: 203 EKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 262
E D + +GGLD+ I E+ E++ +P+KHPE++ GI P+GVLL+GPPG GKT+LA
Sbjct: 166 EPPSDISLSDIGGLDDCINELLELVAMPIKHPEVYQYTGIHPPRGVLLHGPPGCGKTMLA 225
Query: 263 RAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLA 306
A+A+ FI +S +V GE + VRE+F A K LA
Sbjct: 226 NALANELGVPFISISAPSIVSGMSGESEKKVREVFEEA--KSLA 267
Score = 125 (49.1 bits), Expect = 0.00013, P = 0.00013
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 13 GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFF 68
GKTLLA+AVA+ ++ FI + G EL+ K++GE R VR++F+ AR SS FF
Sbjct: 538 GKTLLAKAVANESKANFISIRGPELLNKYVGESERAVRQVFLRARA--SSPCVIFF 591
Score = 83 (34.3 bits), Expect = 7.7e-23, Sum P(2) = 7.7e-23
Identities = 18/45 (40%), Positives = 26/45 (57%)
Query: 13 GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
GKT+LA A+A+ FI +S +V GE + VRE+F A+
Sbjct: 220 GKTMLANALANELGVPFISISAPSIVSGMSGESEKKVREVFEEAK 264
>TAIR|locus:2103555 [details] [associations]
symbol:CIP111 "Cam interacting protein 111" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005516 "calmodulin binding" evidence=IDA;TAS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:CP002686 GO:GO:0016887 GO:GO:0005516 HSSP:Q01853
eggNOG:COG0464 EMBL:AL390921 GO:GO:0009535 HOGENOM:HOG000223224
EMBL:AF217546 EMBL:AF217547 IPI:IPI00534707 PIR:T50927 PIR:T51257
RefSeq:NP_191228.1 UniGene:At.9830 ProteinModelPortal:Q9LET7
SMR:Q9LET7 IntAct:Q9LET7 STRING:Q9LET7 PRIDE:Q9LET7
EnsemblPlants:AT3G56690.1 GeneID:824836 KEGG:ath:AT3G56690
GeneFarm:2042 TAIR:At3g56690 InParanoid:Q9LET7 OMA:SEAKLNF
PhylomeDB:Q9LET7 ProtClustDB:CLSN2684205 Genevestigator:Q9LET7
Uniprot:Q9LET7
Length = 1022
Score = 228 (85.3 bits), Expect = 1.2e-22, Sum P(3) = 1.2e-22
Identities = 45/110 (40%), Positives = 66/110 (60%)
Query: 192 KVDPLVSLMMVEKVPDSTYEMVGGLDNQIK-EIKEVIELPVKHPELFDALGIAQPKGVLL 250
K+ P ++ +VP +E VGG N++K ++ E +E P KH + F +G P G+L+
Sbjct: 705 KIRPSAMREVILEVPKVNWEDVGG-QNEVKNQLMEAVEWPQKHQDAFKRIGTRPPSGILM 763
Query: 251 YGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
+GPPG KTL+ARAVA + F+ V G EL K++GE + VR LF A
Sbjct: 764 FGPPGCSKTLMARAVASEAKLNFLAVKGPELFSKWVGESEKAVRSLFAKA 813
Score = 172 (65.6 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 34/90 (37%), Positives = 57/90 (63%)
Query: 213 VGGLDNQIKEIKEVIELP-VKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTEC 271
+GGL + ++++I+ +K+ +LG+ KGVL++GPPGTGKT LAR A H+
Sbjct: 387 LGGLSKEYAILRDIIDSSSIKNS--LSSLGLRPTKGVLIHGPPGTGKTSLARTFARHSGV 444
Query: 272 TFIRVSGSELVQKFIGEGSRMVRELFVMAS 301
F V+G E++ +++GE + + E+F AS
Sbjct: 445 NFFSVNGPEIISQYLGESEKALDEVFRSAS 474
Score = 92 (37.4 bits), Expect = 1.2e-22, Sum P(3) = 1.2e-22
Identities = 20/62 (32%), Positives = 34/62 (54%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKT LAR A H+ F V+G E++ +++GE + + E+F R ++ F D
Sbjct: 429 TGKTSLARTFARHSGVNFFSVNGPEIISQYLGESEKALDEVF---RSASNATPAVVFIDD 485
Query: 72 VD 73
+D
Sbjct: 486 LD 487
Score = 43 (20.2 bits), Expect = 1.2e-22, Sum P(3) = 1.2e-22
Identities = 14/44 (31%), Positives = 17/44 (38%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDG 373
R +APSIIF R M +LL +LDG
Sbjct: 814 RANAPSIIFFDEIDSLASIRGKENDGVSVS-DRVMSQLLVELDG 856
Score = 38 (18.4 bits), Expect = 4.4e-09, Sum P(2) = 4.4e-09
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 361 QRTMLELLNQLDGFEAT 377
QR + LLN +DG T
Sbjct: 502 QRMVATLLNLMDGISRT 518
>POMBASE|SPBC56F2.07c [details] [associations]
symbol:SPBC56F2.07c "ribosome biogenesis factor
recycling AAA family ATPase (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016887 "ATPase activity"
evidence=ISM] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPBC56F2.07c GO:GO:0005829 GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0016887 PIR:T40537
RefSeq:NP_596710.1 HSSP:Q01853 ProteinModelPortal:O60058
PRIDE:O60058 EnsemblFungi:SPBC56F2.07c.1 GeneID:2540537
KEGG:spo:SPBC56F2.07c eggNOG:COG0464 HOGENOM:HOG000223225 KO:K14575
OMA:SSENMAT OrthoDB:EOG49CTH0 NextBio:20801663 GO:GO:0042273
Uniprot:O60058
Length = 809
Score = 230 (86.0 bits), Expect = 1.8e-22, Sum P(3) = 1.8e-22
Identities = 46/100 (46%), Positives = 63/100 (63%)
Query: 201 MVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTL 260
M+E P+ + +GG + +++KE +E P+ H E F LG+ PKGVLLYGPPG KT+
Sbjct: 539 MMES-PNVHWSDIGGQEEVKQKLKESVEWPLTHGETFSRLGVRPPKGVLLYGPPGCSKTI 597
Query: 261 LARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
A+A+A T FI V G EL KF+GE R VR++F A
Sbjct: 598 TAKAIATETGLNFIAVKGPELFDKFVGESERAVRQVFQKA 637
Score = 224 (83.9 bits), Expect = 7.1e-17, Sum P(2) = 7.1e-17
Identities = 40/89 (44%), Positives = 59/89 (66%)
Query: 209 TYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH 268
T+ +GGL QI +I++++ELP ++PELF I P+GVLLYGPPGTGKT++ RAVA
Sbjct: 277 TFSSIGGLQAQIAQIRDIVELPFQNPELFKFFNIMPPRGVLLYGPPGTGKTMVMRAVAAE 336
Query: 269 TECTFIRVSGSELVQKFIGEGSRMVRELF 297
+ G +V K++GE +R++F
Sbjct: 337 ANAQVFTIDGPSVVGKYLGETESRLRKIF 365
Score = 78 (32.5 bits), Expect = 1.8e-22, Sum P(3) = 1.8e-22
Identities = 16/46 (34%), Positives = 26/46 (56%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKT++ RAVA + G +V K++GE +R++F AR
Sbjct: 324 TGKTMVMRAVAAEANAQVFTIDGPSVVGKYLGETESRLRKIFEDAR 369
Score = 48 (22.0 bits), Expect = 1.8e-22, Sum P(3) = 1.8e-22
Identities = 14/49 (28%), Positives = 20/49 (40%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEATK 378
R+ +PS+IF R + LLN+LDG EA +
Sbjct: 638 RQASPSVIFFDEIDALTANRGEDNSS-----DRVVAALLNELDGIEALR 681
Score = 38 (18.4 bits), Expect = 7.8e-16, Sum P(2) = 7.8e-16
Identities = 11/40 (27%), Positives = 14/40 (35%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLN 369
R H PSIIF+ T+L LL+
Sbjct: 369 RAHQPSIIFIDEIDALAPKRTEDVSEAESRAVATLLTLLD 408
>UNIPROTKB|E1BT72 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016235 "aggresome" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0005730
GO:GO:0016235 GO:GO:0017111 OMA:NDMTLKE
GeneTree:ENSGT00570000079239 EMBL:AADN02012163 IPI:IPI00584236
Ensembl:ENSGALT00000015173 ArrayExpress:E1BT72 Uniprot:E1BT72
Length = 858
Score = 232 (86.7 bits), Expect = 2.8e-22, Sum P(2) = 2.8e-22
Identities = 46/96 (47%), Positives = 64/96 (66%)
Query: 205 VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 264
+PD T+ +G L++ +E+ I PV++PE F ALG+ P GVLL GPPG GKTLLA+A
Sbjct: 575 IPDVTWADIGALEDVREELTMAILAPVRNPEQFKALGLTTPAGVLLAGPPGCGKTLLAKA 634
Query: 265 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
VA+ + FI V G EL+ ++GE R VR++F A
Sbjct: 635 VANESGLNFISVKGPELLNMYVGESERAVRQVFQRA 670
Score = 211 (79.3 bits), Expect = 2.7e-14, P = 2.7e-14
Identities = 43/97 (44%), Positives = 64/97 (65%)
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
P +E VGG D +KEI +++ + V+HPE++ LG+ P+G LL+GPPG GKTLLA+A+
Sbjct: 255 PSVKFEDVGGNDETLKEICKML-IHVRHPEVYLHLGVVPPRGFLLHGPPGCGKTLLAQAI 313
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASL 302
A E ++V+ +E+V GE + +RELF A L
Sbjct: 314 AGELELPMLKVAATEMVSGVSGESEQKLRELFDQAVL 350
Score = 89 (36.4 bits), Expect = 2.8e-22, Sum P(2) = 2.8e-22
Identities = 19/44 (43%), Positives = 28/44 (63%)
Query: 13 GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
GKTLLA+A+A E ++V+ +E+V GE + +RELF A
Sbjct: 305 GKTLLAQAIAGELELPMLKVAATEMVSGVSGESEQKLRELFDQA 348
>WB|WBGene00007352 [details] [associations]
symbol:cdc-48.1 species:6239 "Caenorhabditis elegans"
[GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040002
"collagen and cuticulin-based cuticle development" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040018
"positive regulation of multicellular organism growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IGI] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0002119
GO:GO:0040011 GO:GO:0040018 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 GO:GO:0040002
HOGENOM:HOG000223224 KO:K13525 OMA:QIANECH InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0034098 GeneTree:ENSGT00700000104534
GO:GO:0071712 EMBL:Z49886 PIR:T18970 RefSeq:NP_496273.1
ProteinModelPortal:P54811 SMR:P54811 DIP:DIP-26650N IntAct:P54811
MINT:MINT-1061999 STRING:P54811 PaxDb:P54811 PRIDE:P54811
EnsemblMetazoa:C06A1.1.1 EnsemblMetazoa:C06A1.1.2 GeneID:174624
KEGG:cel:CELE_C06A1.1 UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1
InParanoid:P54811 NextBio:884814 Uniprot:P54811
Length = 809
Score = 259 (96.2 bits), Expect = 3.6e-21, P = 3.6e-21
Identities = 48/104 (46%), Positives = 72/104 (69%)
Query: 194 DPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGP 253
DP+ E + D Y+ +GG+ Q+ +IKE++ELP++HP+LF A+GI P+G+LL+GP
Sbjct: 193 DPIKREEEEESMNDIGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILLFGP 252
Query: 254 PGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 297
PGTGKTL+ARAVA+ T F ++G E++ K GE +R+ F
Sbjct: 253 PGTGKTLIARAVANETGSFFFLINGPEVMSKMSGESESNLRKAF 296
Score = 232 (86.7 bits), Expect = 3.0e-22, Sum P(2) = 3.0e-22
Identities = 43/106 (40%), Positives = 67/106 (63%)
Query: 192 KVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLY 251
K P V + P++T+ +GGL N +E++E+++ PV+HPE + G+ +GVL Y
Sbjct: 464 KSSPSALREAVVETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFY 523
Query: 252 GPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 297
GPPG GKTLLA+A+A+ + FI + G EL+ + GE VR++F
Sbjct: 524 GPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVF 569
Score = 88 (36.0 bits), Expect = 3.0e-22, Sum P(2) = 3.0e-22
Identities = 18/42 (42%), Positives = 27/42 (64%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 53
+GKTL+ARAVA+ T F ++G E++ K GE +R+ F
Sbjct: 255 TGKTLIARAVANETGSFFFLINGPEVMSKMSGESESNLRKAF 296
>UNIPROTKB|P54811 [details] [associations]
symbol:cdc-48.1 "Transitional endoplasmic reticulum ATPase
homolog 1" species:6239 "Caenorhabditis elegans" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0007126 GO:GO:0002119 GO:GO:0040011 GO:GO:0040018
GO:GO:0016887 GO:GO:0000910 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0030968 GO:GO:0040002 HOGENOM:HOG000223224 KO:K13525
OMA:QIANECH InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z49886 PIR:T18970
RefSeq:NP_496273.1 ProteinModelPortal:P54811 SMR:P54811
DIP:DIP-26650N IntAct:P54811 MINT:MINT-1061999 STRING:P54811
PaxDb:P54811 PRIDE:P54811 EnsemblMetazoa:C06A1.1.1
EnsemblMetazoa:C06A1.1.2 GeneID:174624 KEGG:cel:CELE_C06A1.1
UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1 InParanoid:P54811
NextBio:884814 Uniprot:P54811
Length = 809
Score = 259 (96.2 bits), Expect = 3.6e-21, P = 3.6e-21
Identities = 48/104 (46%), Positives = 72/104 (69%)
Query: 194 DPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGP 253
DP+ E + D Y+ +GG+ Q+ +IKE++ELP++HP+LF A+GI P+G+LL+GP
Sbjct: 193 DPIKREEEEESMNDIGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILLFGP 252
Query: 254 PGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 297
PGTGKTL+ARAVA+ T F ++G E++ K GE +R+ F
Sbjct: 253 PGTGKTLIARAVANETGSFFFLINGPEVMSKMSGESESNLRKAF 296
Score = 232 (86.7 bits), Expect = 3.0e-22, Sum P(2) = 3.0e-22
Identities = 43/106 (40%), Positives = 67/106 (63%)
Query: 192 KVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLY 251
K P V + P++T+ +GGL N +E++E+++ PV+HPE + G+ +GVL Y
Sbjct: 464 KSSPSALREAVVETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFY 523
Query: 252 GPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 297
GPPG GKTLLA+A+A+ + FI + G EL+ + GE VR++F
Sbjct: 524 GPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVF 569
Score = 88 (36.0 bits), Expect = 3.0e-22, Sum P(2) = 3.0e-22
Identities = 18/42 (42%), Positives = 27/42 (64%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 53
+GKTL+ARAVA+ T F ++G E++ K GE +R+ F
Sbjct: 255 TGKTLIARAVANETGSFFFLINGPEVMSKMSGESESNLRKAF 296
>UNIPROTKB|G4ML45 [details] [associations]
symbol:MGG_06686 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 EMBL:CM001231 KO:K14571
RefSeq:XP_003709393.1 ProteinModelPortal:G4ML45
EnsemblFungi:MGG_06686T0 GeneID:2684859 KEGG:mgr:MGG_06686
Uniprot:G4ML45
Length = 770
Score = 232 (86.7 bits), Expect = 3.2e-22, Sum P(2) = 3.2e-22
Identities = 46/109 (42%), Positives = 68/109 (62%)
Query: 192 KVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLY 251
++ P VP++T+ VG L N K+++ I P++ PE F ALGI G+LL+
Sbjct: 486 RIQPAAKREGFSTVPNTTWSEVGALQNVRKKLEYAIVQPIERPEKFAALGIKPSAGILLW 545
Query: 252 GPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
GPPG GKTL+A+AVA+ ++ FI + G EL+ K++GE VR+LF A
Sbjct: 546 GPPGCGKTLVAKAVANASKANFISIKGPELLNKYVGESEYNVRQLFSRA 594
Score = 153 (58.9 bits), Expect = 9.7e-08, P = 9.7e-08
Identities = 30/87 (34%), Positives = 51/87 (58%)
Query: 211 EMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTE 270
E +GG+ ++ +++ + LP++ E + +G +LL+GP GTGKT + RA+A +
Sbjct: 197 EDMGGISQILEALEKPLVLPLRMGEEYARMGHKPQAAILLHGPSGTGKTAVVRALADTLQ 256
Query: 271 CTFIRVSGSELVQKFIGEGSRMVRELF 297
C F+ VS + LV GE + +RE F
Sbjct: 257 CAFVPVSATSLVSGISGESEKNIREAF 283
Score = 87 (35.7 bits), Expect = 3.2e-22, Sum P(2) = 3.2e-22
Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 53
+GKT + RA+A +C F+ VS + LV GE + +RE F
Sbjct: 242 TGKTAVVRALADTLQCAFVPVSATSLVSGISGESEKNIREAF 283
>ZFIN|ZDB-GENE-040426-2871 [details] [associations]
symbol:nvl "nuclear VCP-like" species:7955 "Danio
rerio" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
ZFIN:ZDB-GENE-040426-2871 GO:GO:0005524 HSSP:Q01853 GO:GO:0017111
KO:K14571 CTD:4931 HOVERGEN:HBG001226 EMBL:BC044464 IPI:IPI00503965
RefSeq:NP_998649.1 UniGene:Dr.2359 ProteinModelPortal:Q803I9
STRING:Q803I9 PRIDE:Q803I9 GeneID:406805 KEGG:dre:406805
NextBio:20818314 ArrayExpress:Q803I9 Bgee:Q803I9 Uniprot:Q803I9
Length = 796
Score = 227 (85.0 bits), Expect = 5.1e-22, Sum P(2) = 5.1e-22
Identities = 47/106 (44%), Positives = 66/106 (62%)
Query: 192 KVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLY 251
+V P VPD T+ VG L + +E+ I P+++PE F ALG++ P G+LL
Sbjct: 501 RVQPSAKREGFATVPDVTWADVGALQDVREELHMAIMAPIQNPEQFKALGLSAPAGLLLA 560
Query: 252 GPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 297
GPPG GKTLLA+AVA+ + FI V G EL+ ++GE R VR++F
Sbjct: 561 GPPGCGKTLLAKAVANASGLNFISVKGPELLNMYVGESERAVRQVF 606
Score = 202 (76.2 bits), Expect = 2.8e-13, P = 2.8e-13
Identities = 39/91 (42%), Positives = 60/91 (65%)
Query: 210 YEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 269
+E GG D ++E+ +++ + ++HPE++ LG+ P+G LL+GPPG GKTLLA+AVA T
Sbjct: 226 FEDFGGSDETLEEVCKLL-IHMRHPEVYQRLGVVPPRGFLLHGPPGCGKTLLAQAVAGET 284
Query: 270 ECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
+++S ELV GE + +RELF A
Sbjct: 285 ALPLLKISAPELVSGVSGESEQKLRELFEQA 315
Score = 93 (37.8 bits), Expect = 5.1e-22, Sum P(2) = 5.1e-22
Identities = 21/44 (47%), Positives = 27/44 (61%)
Query: 13 GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
GKTLLA+AVA T +++S ELV GE + +RELF A
Sbjct: 272 GKTLLAQAVAGETALPLLKISAPELVSGVSGESEQKLRELFEQA 315
>UNIPROTKB|F6UUI0 [details] [associations]
symbol:SPATA5L1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GeneTree:ENSGT00700000104502 GO:GO:0017111 OMA:TWEQIGG
Ensembl:ENSCAFT00000021792 EMBL:AAEX03016099 Uniprot:F6UUI0
Length = 789
Score = 238 (88.8 bits), Expect = 1.1e-21, Sum P(2) = 1.1e-21
Identities = 52/151 (34%), Positives = 85/151 (56%)
Query: 187 KILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPK 246
KI P+ ++ LM ++ V +E +GGL++ ++K+ IE P+K P F +G+ QPK
Sbjct: 479 KIQPSSFRSVIGLMDIKPVD---WEQIGGLEDVKLKLKQSIEWPLKFPREFVRMGLTQPK 535
Query: 247 GVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLA 306
GVLLYGPPG KT L RA+A C+F+ VSG++L F+G+ +++ ++F A A
Sbjct: 536 GVLLYGPPGCAKTTLVRALATSCHCSFVSVSGADLFSPFVGDSEKVLSQVFRQARANTPA 595
Query: 307 FAHHPLLFWSLLTILTNTIVCNFREHAPSII 337
+ L + + CN +E S++
Sbjct: 596 IVFLDEIDSILGSRSISKTECNVQERVLSVL 626
Score = 176 (67.0 bits), Expect = 4.7e-10, Sum P(2) = 4.7e-10
Identities = 42/102 (41%), Positives = 56/102 (54%)
Query: 213 VGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECT 272
+GGL ++E++ LP+++P ALG+A P+GVLL GPPG GKT L RAVA
Sbjct: 236 LGGLSEAADSLRELLRLPLRYPRTLAALGLAVPRGVLLAGPPGVGKTQLVRAVAREAGAE 295
Query: 273 FIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLF 314
+ VS L GE VR +F A ++LA LLF
Sbjct: 296 LLAVSAPALQGARPGETEENVRRVFGRA--RELASRGPTLLF 335
Score = 72 (30.4 bits), Expect = 1.1e-21, Sum P(2) = 1.1e-21
Identities = 24/69 (34%), Positives = 31/69 (44%)
Query: 13 GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMDV 72
GKT L RAVA + VS L GE VR +F AR + +SRG +D
Sbjct: 280 GKTQLVRAVAREAGAELLAVSAPALQGARPGETEENVRRVFGRAR-ELASRGPTLLFLDE 338
Query: 73 DEAIKSSEG 81
+A+ G
Sbjct: 339 VDALCPRRG 347
Score = 40 (19.1 bits), Expect = 4.7e-10, Sum P(2) = 4.7e-10
Identities = 11/44 (25%), Positives = 18/44 (40%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDG 373
R + P+I+F+ +R + LLN+LDG
Sbjct: 590 RANTPAIVFLDEIDSILGSRSISKTECNVQ-ERVLSVLLNELDG 632
>POMBASE|SPAC1565.08 [details] [associations]
symbol:cdc48 "AAA family ATPase Cdc48" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005789
"endoplasmic reticulum membrane" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IGI] [GO:0006906 "vesicle fusion"
evidence=ISO] [GO:0016887 "ATPase activity" evidence=ISM]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISS] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IGI] [GO:0033554 "cellular response to
stress" evidence=IGI] [GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase
complex" evidence=ISO] [GO:0051230 "spindle disassembly"
evidence=TAS] [GO:0061166 "establishment of endoplasmic reticulum
localization involved in endoplasmic reticulum polarization at cell
division site" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 PomBase:SPAC1565.08 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0033554 GO:GO:0016887 GO:GO:0000790 GO:GO:0030433
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0006906 GO:GO:0033047 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0061166
OrthoDB:EOG47H8Z3 RefSeq:NP_593287.2 ProteinModelPortal:Q9P3A7
SMR:Q9P3A7 IntAct:Q9P3A7 STRING:Q9P3A7 PRIDE:Q9P3A7
EnsemblFungi:SPAC1565.08.1 GeneID:2542744 KEGG:spo:SPAC1565.08
OMA:IVTIHPC NextBio:20803789 GO:GO:0034098 GO:GO:0030970
GO:GO:0051230 Uniprot:Q9P3A7
Length = 815
Score = 248 (92.4 bits), Expect = 5.5e-20, P = 5.5e-20
Identities = 42/88 (47%), Positives = 65/88 (73%)
Query: 210 YEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 269
Y+ +GG Q+ +I+E++ELP++HP+LF ++GI P+G+L+YGPPGTGKTL+ARAVA+ T
Sbjct: 223 YDDIGGCRRQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVANET 282
Query: 270 ECTFIRVSGSELVQKFIGEGSRMVRELF 297
F ++G E++ K GE +R+ F
Sbjct: 283 GAFFFLINGPEIMSKMAGESESNLRKAF 310
Score = 226 (84.6 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 42/96 (43%), Positives = 63/96 (65%)
Query: 202 VEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLL 261
V +VP+ +E +GGL+ +E++E +++PV + E F G+ KGVL +GPPGTGKTLL
Sbjct: 488 VVEVPNVRWEDIGGLEEVKRELRETVQMPVMYAEKFLRFGVTPSKGVLFFGPPGTGKTLL 547
Query: 262 ARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 297
A+A+A+ FI V G EL+ + GE VR++F
Sbjct: 548 AKAIANECSANFISVKGPELLSMWFGESESNVRDIF 583
Score = 91 (37.1 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 18/42 (42%), Positives = 27/42 (64%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 53
+GKTL+ARAVA+ T F ++G E++ K GE +R+ F
Sbjct: 269 TGKTLMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAF 310
>UNIPROTKB|A7YSY2 [details] [associations]
symbol:SPATA5L1 "Spermatogenesis-associated protein 5-like
protein 1" species:9913 "Bos taurus" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 eggNOG:COG0464 HOGENOM:HOG000223225
GeneTree:ENSGT00700000104502 GO:GO:0017111 HOVERGEN:HBG001226
EMBL:BC114696 IPI:IPI00693499 RefSeq:NP_001099095.1
UniGene:Bt.21280 ProteinModelPortal:A7YSY2 PRIDE:A7YSY2
Ensembl:ENSBTAT00000024327 GeneID:533070 KEGG:bta:533070 CTD:79029
InParanoid:A7YSY2 OMA:TWEQIGG OrthoDB:EOG42RD70 NextBio:20875900
Uniprot:A7YSY2
Length = 767
Score = 226 (84.6 bits), Expect = 2.1e-21, Sum P(3) = 2.1e-21
Identities = 44/114 (38%), Positives = 72/114 (63%)
Query: 187 KILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPK 246
KI P+ ++ + ++ V +E +GGL++ ++K+ IE P+K P F +G+ QPK
Sbjct: 445 KIQPSSFRSVIGVTDIKPVG---WEQIGGLEDVKLKLKQSIEWPLKFPREFVRMGLTQPK 501
Query: 247 GVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
GVLLYGPPG KT L RA+A C+F+ VSG++L F+G+ +++ ++F A
Sbjct: 502 GVLLYGPPGCAKTTLVRALATSCRCSFVSVSGADLFSPFVGDSEKILSQVFRQA 555
Score = 178 (67.7 bits), Expect = 4.0e-10, Sum P(2) = 4.0e-10
Identities = 48/127 (37%), Positives = 65/127 (51%)
Query: 193 VDPLVSLMMVEKVPDSTYEM-----VGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKG 247
V P + + E VP S E +GGL ++E++ LP+++P +LG+ P+G
Sbjct: 178 VTPRTHISLSE-VPPSEEEPQPEVPLGGLSEAADSLRELLRLPLRYPRALASLGLEVPRG 236
Query: 248 VLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAF 307
VLL GPPG GKT L RAVA T + VS L GE VR +F A ++LA
Sbjct: 237 VLLAGPPGVGKTQLVRAVARETGAELLAVSAPALQGARPGETEENVRRIFKRA--RELAS 294
Query: 308 AHHPLLF 314
LLF
Sbjct: 295 RRPTLLF 301
Score = 83 (34.3 bits), Expect = 2.1e-21, Sum P(3) = 2.1e-21
Identities = 25/61 (40%), Positives = 28/61 (45%)
Query: 13 GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMDV 72
GKT L RAVA T + VS L GE VR +F AR S R T F +V
Sbjct: 246 GKTQLVRAVARETGAELLAVSAPALQGARPGETEENVRRIFKRARELASRRPTLLFLDEV 305
Query: 73 D 73
D
Sbjct: 306 D 306
Score = 38 (18.4 bits), Expect = 2.1e-21, Sum P(3) = 2.1e-21
Identities = 11/44 (25%), Positives = 17/44 (38%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDG 373
R + P+I+F+ R + LLN+LDG
Sbjct: 556 RANTPAIVFLDEIDSILGSRSISRTECNVQ-DRVLSVLLNELDG 598
>UNIPROTKB|H9KYT1 [details] [associations]
symbol:LOC430766 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336
PANTHER:PTHR23077:SF18 GeneTree:ENSGT00700000104534
EMBL:AADN02071262 Ensembl:ENSGALT00000000527 OMA:NRRTHAK
Uniprot:H9KYT1
Length = 538
Score = 241 (89.9 bits), Expect = 2.1e-21, Sum P(3) = 2.1e-21
Identities = 44/96 (45%), Positives = 66/96 (68%)
Query: 202 VEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLL 261
V +VP T+E +GGL++ +E++E+++ PV+HP+ F G+ KGVL YGPPG GKTLL
Sbjct: 200 VVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLL 259
Query: 262 ARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 297
A+A+A+ + FI + G EL+ + GE VRE+F
Sbjct: 260 AKAIANECQANFISIKGPELLTMWFGESEANVREIF 295
Score = 41 (19.5 bits), Expect = 2.1e-21, Sum P(3) = 2.1e-21
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 33 SGSELVQKFIGEGSRMVRELF 53
SG E++ K GE +R+ F
Sbjct: 2 SGPEIMSKLAGESESNLRKAF 22
Score = 41 (19.5 bits), Expect = 2.1e-21, Sum P(3) = 2.1e-21
Identities = 9/49 (18%), Positives = 17/49 (34%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEATK 378
R+ AP ++F R + ++L ++DG K
Sbjct: 299 RQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKK 347
>CGD|CAL0000102 [details] [associations]
symbol:RIX7 species:5476 "Candida albicans" [GO:0030448
"hyphal growth" evidence=IMP] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0030687 "preribosome, large subunit precursor" evidence=IEA]
[GO:0000055 "ribosomal large subunit export from nucleus"
evidence=IEA] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IEA] [GO:0044011 "single-species biofilm formation on
inanimate substrate" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0000102 GO:GO:0005524 eggNOG:COG0464
GO:GO:0017111 GO:GO:0030448 GO:GO:0044011 EMBL:AACQ01000021
EMBL:AACQ01000022 KO:K14571 RefSeq:XP_720530.1 RefSeq:XP_720658.1
ProteinModelPortal:Q5AGG2 STRING:Q5AGG2 GeneID:3637615
GeneID:3637735 KEGG:cal:CaO19.11695 KEGG:cal:CaO19.4219
Uniprot:Q5AGG2
Length = 827
Score = 234 (87.4 bits), Expect = 2.6e-21, Sum P(2) = 2.6e-21
Identities = 49/112 (43%), Positives = 69/112 (61%)
Query: 189 LPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGV 248
LP+ V P +PD T++ VG L E+ I P+K PEL+ +GIA P GV
Sbjct: 501 LPS-VQPSAKREGFATIPDVTWQNVGALFKIRMELHMCIVQPIKKPELYLKVGIAAPAGV 559
Query: 249 LLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
L++GPPG GKTLLA+AVA+ + FI + G EL+ K++GE + VR++F A
Sbjct: 560 LMWGPPGCGKTLLAKAVANESRANFISIKGPELLNKYVGESEKAVRQVFQRA 611
Score = 206 (77.6 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 39/101 (38%), Positives = 63/101 (62%)
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
P+ +GG+++ ++ E+I LP+ HPE++ + G+ P+GVLLYGPPG GKT +A A+
Sbjct: 188 PNIDLSSLGGVESVTTQLLEIIGLPILHPEIYSSTGVEPPRGVLLYGPPGCGKTTIANAL 247
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLA 306
A + FI +S +V GE + +RE+F A K++A
Sbjct: 248 AGELKVPFINISAPSVVSGMSGESEKKLREIFEEA--KQIA 286
Score = 118 (46.6 bits), Expect = 0.00081, P = 0.00081
Identities = 22/45 (48%), Positives = 32/45 (71%)
Query: 13 GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
GKTLLA+AVA+ + FI + G EL+ K++GE + VR++F AR
Sbjct: 568 GKTLLAKAVANESRANFISIKGPELLNKYVGESEKAVRQVFQRAR 612
Score = 76 (31.8 bits), Expect = 2.6e-21, Sum P(2) = 2.6e-21
Identities = 16/45 (35%), Positives = 25/45 (55%)
Query: 13 GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
GKT +A A+A + FI +S +V GE + +RE+F A+
Sbjct: 239 GKTTIANALAGELKVPFINISAPSVVSGMSGESEKKLREIFEEAK 283
>UNIPROTKB|Q5AGG2 [details] [associations]
symbol:RIX7 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0030448 "hyphal
growth" evidence=IMP] [GO:0044011 "single-species biofilm formation
on inanimate substrate" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0000102 GO:GO:0005524 eggNOG:COG0464
GO:GO:0017111 GO:GO:0030448 GO:GO:0044011 EMBL:AACQ01000021
EMBL:AACQ01000022 KO:K14571 RefSeq:XP_720530.1 RefSeq:XP_720658.1
ProteinModelPortal:Q5AGG2 STRING:Q5AGG2 GeneID:3637615
GeneID:3637735 KEGG:cal:CaO19.11695 KEGG:cal:CaO19.4219
Uniprot:Q5AGG2
Length = 827
Score = 234 (87.4 bits), Expect = 2.6e-21, Sum P(2) = 2.6e-21
Identities = 49/112 (43%), Positives = 69/112 (61%)
Query: 189 LPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGV 248
LP+ V P +PD T++ VG L E+ I P+K PEL+ +GIA P GV
Sbjct: 501 LPS-VQPSAKREGFATIPDVTWQNVGALFKIRMELHMCIVQPIKKPELYLKVGIAAPAGV 559
Query: 249 LLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
L++GPPG GKTLLA+AVA+ + FI + G EL+ K++GE + VR++F A
Sbjct: 560 LMWGPPGCGKTLLAKAVANESRANFISIKGPELLNKYVGESEKAVRQVFQRA 611
Score = 206 (77.6 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 39/101 (38%), Positives = 63/101 (62%)
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
P+ +GG+++ ++ E+I LP+ HPE++ + G+ P+GVLLYGPPG GKT +A A+
Sbjct: 188 PNIDLSSLGGVESVTTQLLEIIGLPILHPEIYSSTGVEPPRGVLLYGPPGCGKTTIANAL 247
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLA 306
A + FI +S +V GE + +RE+F A K++A
Sbjct: 248 AGELKVPFINISAPSVVSGMSGESEKKLREIFEEA--KQIA 286
Score = 118 (46.6 bits), Expect = 0.00081, P = 0.00081
Identities = 22/45 (48%), Positives = 32/45 (71%)
Query: 13 GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
GKTLLA+AVA+ + FI + G EL+ K++GE + VR++F AR
Sbjct: 568 GKTLLAKAVANESRANFISIKGPELLNKYVGESEKAVRQVFQRAR 612
Score = 76 (31.8 bits), Expect = 2.6e-21, Sum P(2) = 2.6e-21
Identities = 16/45 (35%), Positives = 25/45 (55%)
Query: 13 GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
GKT +A A+A + FI +S +V GE + +RE+F A+
Sbjct: 239 GKTTIANALAGELKVPFINISAPSVVSGMSGESEKKLREIFEEAK 283
>GENEDB_PFALCIPARUM|PFF0940c [details] [associations]
symbol:PFF0940c "cell division cycle protein 48
homologue, putative" species:5833 "Plasmodium falciparum"
[GO:0051726 "regulation of cell cycle" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0051301 GO:GO:0051726
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK EMBL:AL844505 RefSeq:XP_966179.2
ProteinModelPortal:C6KT34 PRIDE:C6KT34
EnsemblProtists:PFF0940c:mRNA GeneID:3885942 KEGG:pfa:PFF0940c
EuPathDB:PlasmoDB:PF3D7_0619400 ProtClustDB:CLSZ2429060
Uniprot:C6KT34
Length = 828
Score = 247 (92.0 bits), Expect = 2.6e-21, Sum P(2) = 2.6e-21
Identities = 45/95 (47%), Positives = 65/95 (68%)
Query: 203 EKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 262
EK+ + Y+ +GG Q+ +I+E+IELP++HP LF LG+ P+GVLLYGPPG+GKT +A
Sbjct: 199 EKLDEIGYDDIGGCKKQLAQIREMIELPLRHPGLFKTLGVKPPRGVLLYGPPGSGKTCIA 258
Query: 263 RAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 297
RAVA+ T F ++G E++ K GE +R F
Sbjct: 259 RAVANETGAFFFLINGPEVMSKMAGEAEANLRRAF 293
Score = 221 (82.9 bits), Expect = 5.9e-21, Sum P(3) = 5.9e-21
Identities = 41/96 (42%), Positives = 61/96 (63%)
Query: 202 VEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLL 261
V +VP+ ++ +GGLD ++E+I P+ HP+ F+ G++ +GVL YGPPG GKTLL
Sbjct: 471 VVEVPNVKWDDIGGLDEVKSTLREMILYPIDHPDKFEKFGMSPSRGVLFYGPPGCGKTLL 530
Query: 262 ARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 297
A+AVA F+ + G EL+ + GE VRE+F
Sbjct: 531 AKAVASECSANFVSIKGPELLTMWFGESEANVREVF 566
Score = 87 (35.7 bits), Expect = 5.9e-21, Sum P(3) = 5.9e-21
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 53
SGKT +ARAVA+ T F ++G E++ K GE +R F
Sbjct: 252 SGKTCIARAVANETGAFFFLINGPEVMSKMAGEAEANLRRAF 293
Score = 40 (19.1 bits), Expect = 3.9e-16, Sum P(3) = 3.9e-16
Identities = 11/43 (25%), Positives = 21/43 (48%)
Query: 72 VDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRL--QAQRN 112
+ A+ + G + + E + + E E NLRR +A++N
Sbjct: 257 IARAVANETGAFFFLINGPEVMSKMAGEAEANLRRAFEEAEKN 299
Score = 39 (18.8 bits), Expect = 2.6e-21, Sum P(2) = 2.6e-21
Identities = 10/44 (22%), Positives = 15/44 (34%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDG 373
R AP ++F R M +LL ++DG
Sbjct: 570 RAAAPCVLFFDELDSIGTQRGSSLGDGSGAGDRVMNQLLTEIDG 613
>UNIPROTKB|C6KT34 [details] [associations]
symbol:PFF0940c "Cell division cycle protein 48 homologue,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0051726
"regulation of cell cycle" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0051301 GO:GO:0051726
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK EMBL:AL844505 RefSeq:XP_966179.2
ProteinModelPortal:C6KT34 PRIDE:C6KT34
EnsemblProtists:PFF0940c:mRNA GeneID:3885942 KEGG:pfa:PFF0940c
EuPathDB:PlasmoDB:PF3D7_0619400 ProtClustDB:CLSZ2429060
Uniprot:C6KT34
Length = 828
Score = 247 (92.0 bits), Expect = 2.6e-21, Sum P(2) = 2.6e-21
Identities = 45/95 (47%), Positives = 65/95 (68%)
Query: 203 EKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 262
EK+ + Y+ +GG Q+ +I+E+IELP++HP LF LG+ P+GVLLYGPPG+GKT +A
Sbjct: 199 EKLDEIGYDDIGGCKKQLAQIREMIELPLRHPGLFKTLGVKPPRGVLLYGPPGSGKTCIA 258
Query: 263 RAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 297
RAVA+ T F ++G E++ K GE +R F
Sbjct: 259 RAVANETGAFFFLINGPEVMSKMAGEAEANLRRAF 293
Score = 221 (82.9 bits), Expect = 5.9e-21, Sum P(3) = 5.9e-21
Identities = 41/96 (42%), Positives = 61/96 (63%)
Query: 202 VEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLL 261
V +VP+ ++ +GGLD ++E+I P+ HP+ F+ G++ +GVL YGPPG GKTLL
Sbjct: 471 VVEVPNVKWDDIGGLDEVKSTLREMILYPIDHPDKFEKFGMSPSRGVLFYGPPGCGKTLL 530
Query: 262 ARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 297
A+AVA F+ + G EL+ + GE VRE+F
Sbjct: 531 AKAVASECSANFVSIKGPELLTMWFGESEANVREVF 566
Score = 87 (35.7 bits), Expect = 5.9e-21, Sum P(3) = 5.9e-21
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 53
SGKT +ARAVA+ T F ++G E++ K GE +R F
Sbjct: 252 SGKTCIARAVANETGAFFFLINGPEVMSKMAGEAEANLRRAF 293
Score = 40 (19.1 bits), Expect = 3.9e-16, Sum P(3) = 3.9e-16
Identities = 11/43 (25%), Positives = 21/43 (48%)
Query: 72 VDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRL--QAQRN 112
+ A+ + G + + E + + E E NLRR +A++N
Sbjct: 257 IARAVANETGAFFFLINGPEVMSKMAGEAEANLRRAFEEAEKN 299
Score = 39 (18.8 bits), Expect = 2.6e-21, Sum P(2) = 2.6e-21
Identities = 10/44 (22%), Positives = 15/44 (34%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDG 373
R AP ++F R M +LL ++DG
Sbjct: 570 RAAAPCVLFFDELDSIGTQRGSSLGDGSGAGDRVMNQLLTEIDG 613
>UNIPROTKB|H0Y8B6 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0016235
"aggresome" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
GO:GO:0017111 EMBL:AC092809 HGNC:HGNC:8070 ChiTaRS:NVL
Ensembl:ENST00000469968 Uniprot:H0Y8B6
Length = 739
Score = 224 (83.9 bits), Expect = 3.0e-21, Sum P(3) = 3.0e-21
Identities = 45/96 (46%), Positives = 64/96 (66%)
Query: 205 VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 264
VP+ T+ +G L++ +E+ I PV++P+ F ALG+ P GVLL GPPG GKTLLA+A
Sbjct: 458 VPNVTWADIGALEDIREELTMAILAPVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKA 517
Query: 265 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
VA+ + FI V G EL+ ++GE R VR++F A
Sbjct: 518 VANESGLNFISVKGPELLNMYVGESERAVRQVFQRA 553
Score = 203 (76.5 bits), Expect = 3.4e-13, Sum P(2) = 3.4e-13
Identities = 39/97 (40%), Positives = 64/97 (65%)
Query: 204 KVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLAR 263
++ + +E VGG D +KE+ +++ + ++HPE++ LG+ P+GVLL+GPPG GKTLLA
Sbjct: 141 QISNVKFEDVGGNDMTLKEVCKML-IHMRHPEVYHHLGVVPPRGVLLHGPPGCGKTLLAH 199
Query: 264 AVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
A+A + ++V+ E+V GE + +RELF A
Sbjct: 200 AIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQA 236
Score = 84 (34.6 bits), Expect = 3.0e-21, Sum P(3) = 3.0e-21
Identities = 18/44 (40%), Positives = 26/44 (59%)
Query: 13 GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
GKTLLA A+A + ++V+ E+V GE + +RELF A
Sbjct: 193 GKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQA 236
Score = 38 (18.4 bits), Expect = 3.0e-21, Sum P(3) = 3.0e-21
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 362 RTMLELLNQLDGFEA 376
R + +LL ++DG EA
Sbjct: 583 RVVNQLLTEMDGLEA 597
>SGD|S000004389 [details] [associations]
symbol:AFG2 "ATPase of the CDC48/PAS1/SEC18 (AAA) family,
forms a hexameric complex" species:4932 "Saccharomyces cerevisiae"
[GO:0030687 "preribosome, large subunit precursor"
evidence=IDA;IMP] [GO:0042493 "response to drug" evidence=IMP]
[GO:0005622 "intracellular" evidence=IDA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0042273 "ribosomal
large subunit biogenesis" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000004389 GO:GO:0005524 GO:GO:0042493
EMBL:BK006945 GO:GO:0016887 eggNOG:COG0464 HOGENOM:HOG000223225
KO:K14575 OrthoDB:EOG49CTH0 GO:GO:0042273 EMBL:L14615 EMBL:U19729
EMBL:AY693116 PIR:S39110 RefSeq:NP_013501.1
ProteinModelPortal:P32794 SMR:P32794 DIP:DIP-4470N IntAct:P32794
MINT:MINT-566202 STRING:P32794 PaxDb:P32794 PeptideAtlas:P32794
EnsemblFungi:YLR397C GeneID:851113 KEGG:sce:YLR397C CYGD:YLR397c
GeneTree:ENSGT00700000104502 OMA:MLLRCVA NextBio:967827
Genevestigator:P32794 GermOnline:YLR397C GO:GO:0030687
Uniprot:P32794
Length = 780
Score = 229 (85.7 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 38/89 (42%), Positives = 62/89 (69%)
Query: 209 TYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH 268
+Y VGGLD +I+ +K IE+P+ P LF + G++ P+G+LL+GPPGTGKT+L R VA+
Sbjct: 243 SYAAVGGLDKEIESLKSAIEIPLHQPTLFSSFGVSPPRGILLHGPPGTGKTMLLRVVANT 302
Query: 269 TECTFIRVSGSELVQKFIGEGSRMVRELF 297
+ + ++G +V K++GE +R++F
Sbjct: 303 SNAHVLTINGPSIVSKYLGETEAALRDIF 331
Score = 217 (81.4 bits), Expect = 3.3e-21, Sum P(3) = 3.3e-21
Identities = 41/94 (43%), Positives = 62/94 (65%)
Query: 204 KVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLAR 263
++P + +GG + ++KE+I+LP++ E F LGI+ PKGVLLYGPPG KTL A+
Sbjct: 509 EMPKVYWSDIGGQEELKTKMKEMIQLPLEASETFARLGISAPKGVLLYGPPGCSKTLTAK 568
Query: 264 AVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 297
A+A + F+ V G E+ K++GE R +RE+F
Sbjct: 569 ALATESGINFLAVKGPEIFNKYVGESERAIREIF 602
Score = 85 (35.0 bits), Expect = 3.3e-21, Sum P(3) = 3.3e-21
Identities = 16/46 (34%), Positives = 29/46 (63%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKT+L R VA+ + + ++G +V K++GE +R++F AR
Sbjct: 290 TGKTMLLRVVANTSNAHVLTINGPSIVSKYLGETEAALRDIFNEAR 335
Score = 48 (22.0 bits), Expect = 3.3e-21, Sum P(3) = 3.3e-21
Identities = 15/49 (30%), Positives = 18/49 (36%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEATK 378
R APSIIF V + LLN++DG E K
Sbjct: 606 RSAAPSIIFFDEIDALSPDRDGSSTSAANHV---LTSLLNEIDGVEELK 651
>UNIPROTKB|F8W938 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0016235
"aggresome" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
GO:GO:0017111 EMBL:AC092809 HGNC:HGNC:8070 ChiTaRS:NVL
IPI:IPI01012615 ProteinModelPortal:F8W938 SMR:F8W938
Ensembl:ENST00000361463 ArrayExpress:F8W938 Bgee:F8W938
Uniprot:F8W938
Length = 589
Score = 224 (83.9 bits), Expect = 4.1e-21, Sum P(2) = 4.1e-21
Identities = 45/96 (46%), Positives = 64/96 (66%)
Query: 205 VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 264
VP+ T+ +G L++ +E+ I PV++P+ F ALG+ P GVLL GPPG GKTLLA+A
Sbjct: 469 VPNVTWADIGALEDIREELTMAILAPVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKA 528
Query: 265 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
VA+ + FI V G EL+ ++GE R VR++F A
Sbjct: 529 VANESGLNFISVKGPELLNMYVGESERAVRQVFQRA 564
Score = 203 (76.5 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 39/97 (40%), Positives = 64/97 (65%)
Query: 204 KVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLAR 263
++ + +E VGG D +KE+ +++ + ++HPE++ LG+ P+GVLL+GPPG GKTLLA
Sbjct: 152 QISNVKFEDVGGNDMTLKEVCKML-IHMRHPEVYHHLGVVPPRGVLLHGPPGCGKTLLAH 210
Query: 264 AVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
A+A + ++V+ E+V GE + +RELF A
Sbjct: 211 AIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQA 247
Score = 116 (45.9 bits), Expect = 0.00087, P = 0.00087
Identities = 28/61 (45%), Positives = 38/61 (62%)
Query: 13 GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMDV 72
GKTLLA+AVA+ + FI V G EL+ ++GE R VR++F R K S+ FF +V
Sbjct: 521 GKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVF--QRAKNSAPCVIFFD-EV 577
Query: 73 D 73
D
Sbjct: 578 D 578
Score = 84 (34.6 bits), Expect = 4.1e-21, Sum P(2) = 4.1e-21
Identities = 18/44 (40%), Positives = 26/44 (59%)
Query: 13 GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
GKTLLA A+A + ++V+ E+V GE + +RELF A
Sbjct: 204 GKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQA 247
>FB|FBgn0016983 [details] [associations]
symbol:smid "smallminded" species:7227 "Drosophila
melanogaster" [GO:0016887 "ATPase activity" evidence=ISS;NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014296 GO:GO:0022008 GO:GO:0016887 HSSP:Q01853
KO:K14571 GeneTree:ENSGT00570000079239 UniGene:Dm.875 GeneID:38824
KEGG:dme:Dmel_CG8571 CTD:38824 FlyBase:FBgn0016983 GenomeRNAi:38824
NextBio:810567 RefSeq:NP_523959.2 ProteinModelPortal:Q9VS62
SMR:Q9VS62 IntAct:Q9VS62 MINT:MINT-754496 STRING:Q9VS62
PRIDE:Q9VS62 EnsemblMetazoa:FBtr0076851 UCSC:CG8571-RA
InParanoid:Q9VS62 OMA:EFDSLCP PhylomeDB:Q9VS62 ArrayExpress:Q9VS62
Bgee:Q9VS62 Uniprot:Q9VS62
Length = 944
Score = 235 (87.8 bits), Expect = 4.4e-21, Sum P(2) = 4.4e-21
Identities = 45/96 (46%), Positives = 63/96 (65%)
Query: 205 VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 264
VPD+T++ +G L+ +E+K + PVK+PE+ + LG+ P GVLL GPPG GKTLLA+A
Sbjct: 656 VPDTTWDDIGALEKIREELKLAVLAPVKYPEMLERLGLTAPSGVLLCGPPGCGKTLLAKA 715
Query: 265 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
+A+ FI V G EL+ ++GE R VR F A
Sbjct: 716 IANEAGINFISVKGPELMNMYVGESERAVRACFQRA 751
Score = 185 (70.2 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 34/95 (35%), Positives = 59/95 (62%)
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 265
P ++ +GG+D+ +KE+ E++ + +K PE + LG+ +G+LL+GPPG GKT LARA+
Sbjct: 246 PTESFRDIGGMDSTLKELCEML-IHIKSPEFYFQLGLLPSRGLLLHGPPGCGKTFLARAI 304
Query: 266 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
+ + + + +EL+ GE +RE+F A
Sbjct: 305 SGQLKMPLMEIPATELIGGISGESEERIREVFDQA 339
Score = 74 (31.1 bits), Expect = 4.4e-21, Sum P(2) = 4.4e-21
Identities = 15/44 (34%), Positives = 24/44 (54%)
Query: 13 GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
GKT LARA++ + + + +EL+ GE +RE+F A
Sbjct: 296 GKTFLARAISGQLKMPLMEIPATELIGGISGESEERIREVFDQA 339
>UNIPROTKB|O15381 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0016235
"aggresome" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0017111 KO:K14571
EMBL:U68140 EMBL:U78772 EMBL:AK297396 EMBL:AK298244 EMBL:AC092809
EMBL:BC012105 IPI:IPI00006197 IPI:IPI00183080 IPI:IPI00185801
RefSeq:NP_001230075.1 RefSeq:NP_001230076.1 RefSeq:NP_002524.2
RefSeq:NP_996671.1 UniGene:Hs.497867 PDB:2X8A PDBsum:2X8A
ProteinModelPortal:O15381 SMR:O15381 IntAct:O15381
MINT:MINT-1423251 STRING:O15381 PhosphoSite:O15381
SWISS-2DPAGE:O15381 PaxDb:O15381 PRIDE:O15381 DNASU:4931
Ensembl:ENST00000281701 Ensembl:ENST00000340871
Ensembl:ENST00000391875 Ensembl:ENST00000469075 GeneID:4931
KEGG:hsa:4931 UCSC:uc001hok.3 CTD:4931 GeneCards:GC01M224416
HGNC:HGNC:8070 HPA:HPA028207 MIM:602426 neXtProt:NX_O15381
PharmGKB:PA31857 HOVERGEN:HBG001226 InParanoid:O15381 OMA:NDMTLKE
OrthoDB:EOG4ZPDTN PhylomeDB:O15381 ChiTaRS:NVL
EvolutionaryTrace:O15381 GenomeRNAi:4931 NextBio:19001
ArrayExpress:O15381 Bgee:O15381 CleanEx:HS_NVL
Genevestigator:O15381 GermOnline:ENSG00000143748 Uniprot:O15381
Length = 856
Score = 224 (83.9 bits), Expect = 6.0e-21, Sum P(3) = 6.0e-21
Identities = 45/96 (46%), Positives = 64/96 (66%)
Query: 205 VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 264
VP+ T+ +G L++ +E+ I PV++P+ F ALG+ P GVLL GPPG GKTLLA+A
Sbjct: 575 VPNVTWADIGALEDIREELTMAILAPVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKA 634
Query: 265 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
VA+ + FI V G EL+ ++GE R VR++F A
Sbjct: 635 VANESGLNFISVKGPELLNMYVGESERAVRQVFQRA 670
Score = 203 (76.5 bits), Expect = 5.3e-13, Sum P(2) = 5.3e-13
Identities = 39/97 (40%), Positives = 64/97 (65%)
Query: 204 KVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLAR 263
++ + +E VGG D +KE+ +++ + ++HPE++ LG+ P+GVLL+GPPG GKTLLA
Sbjct: 258 QISNVKFEDVGGNDMTLKEVCKML-IHMRHPEVYHHLGVVPPRGVLLHGPPGCGKTLLAH 316
Query: 264 AVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
A+A + ++V+ E+V GE + +RELF A
Sbjct: 317 AIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQA 353
Score = 84 (34.6 bits), Expect = 6.0e-21, Sum P(3) = 6.0e-21
Identities = 18/44 (40%), Positives = 26/44 (59%)
Query: 13 GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
GKTLLA A+A + ++V+ E+V GE + +RELF A
Sbjct: 310 GKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQA 353
Score = 38 (18.4 bits), Expect = 6.0e-21, Sum P(3) = 6.0e-21
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 362 RTMLELLNQLDGFEA 376
R + +LL ++DG EA
Sbjct: 700 RVVNQLLTEMDGLEA 714
>UNIPROTKB|Q9BVQ7 [details] [associations]
symbol:SPATA5L1 "Spermatogenesis-associated protein 5-like
protein 1" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 HSSP:Q01853 eggNOG:COG0464 HOGENOM:HOG000223225
GO:GO:0017111 EMBL:AC025580 HOVERGEN:HBG001226 CTD:79029
OMA:TWEQIGG OrthoDB:EOG42RD70 EMBL:AK022348 EMBL:AK023232
EMBL:AK291457 EMBL:AC090527 EMBL:BC000981 IPI:IPI00031608
IPI:IPI00386906 IPI:IPI00890778 RefSeq:NP_076968.2
UniGene:Hs.369657 ProteinModelPortal:Q9BVQ7 SMR:Q9BVQ7
STRING:Q9BVQ7 PhosphoSite:Q9BVQ7 DMDM:292495038 PaxDb:Q9BVQ7
PRIDE:Q9BVQ7 Ensembl:ENST00000305560 Ensembl:ENST00000531970
Ensembl:ENST00000559860 GeneID:79029 KEGG:hsa:79029 UCSC:uc001zve.3
GeneCards:GC15P045694 H-InvDB:HIX0012209 HGNC:HGNC:28762
HPA:HPA043679 neXtProt:NX_Q9BVQ7 PharmGKB:PA134923477
InParanoid:Q9BVQ7 PhylomeDB:Q9BVQ7 GenomeRNAi:79029 NextBio:67739
Bgee:Q9BVQ7 CleanEx:HS_SPATA5L1 Genevestigator:Q9BVQ7
Uniprot:Q9BVQ7
Length = 753
Score = 227 (85.0 bits), Expect = 7.1e-21, Sum P(3) = 7.1e-21
Identities = 45/113 (39%), Positives = 72/113 (63%)
Query: 188 ILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKG 247
I P+ ++ LM ++ V +E +GGL++ ++K+ IE P+K P F +G+ QPKG
Sbjct: 444 IQPSSFRSVIGLMDIKPVD---WEEIGGLEDVKLKLKQSIEWPLKFPWEFVRMGLTQPKG 500
Query: 248 VLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
VLLYGPPG KT L RA+A C+F+ VSG++L F+G+ +++ ++F A
Sbjct: 501 VLLYGPPGCAKTTLVRALATSCHCSFVSVSGADLFSPFVGDSEKVLSQIFRQA 553
Score = 179 (68.1 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 42/102 (41%), Positives = 56/102 (54%)
Query: 213 VGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECT 272
+GGL ++E++ LP+++P ALG+A P+GVLL GPPG GKT L RAVA
Sbjct: 202 LGGLSEAADSLRELLRLPLRYPRALTALGLAVPRGVLLAGPPGVGKTQLVRAVAREAGAE 261
Query: 273 FIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLF 314
+ VS L GE VR +F A ++LA LLF
Sbjct: 262 LLAVSAPALQGSRPGETEENVRRVFQRA--RELASRGPSLLF 301
Score = 76 (31.8 bits), Expect = 7.1e-21, Sum P(3) = 7.1e-21
Identities = 24/69 (34%), Positives = 31/69 (44%)
Query: 13 GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMDV 72
GKT L RAVA + VS L GE VR +F AR + +SRG +D
Sbjct: 246 GKTQLVRAVAREAGAELLAVSAPALQGSRPGETEENVRRVFQRAR-ELASRGPSLLFLDE 304
Query: 73 DEAIKSSEG 81
+A+ G
Sbjct: 305 MDALCPQRG 313
Score = 38 (18.4 bits), Expect = 7.1e-21, Sum P(3) = 7.1e-21
Identities = 11/44 (25%), Positives = 17/44 (38%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDG 373
R P+I+F+ +R + LLN+LDG
Sbjct: 554 RASTPAILFLDEIDSILGARSASKTGCDVQ-ERVLSVLLNELDG 596
>UNIPROTKB|E2QY79 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 GeneTree:ENSGT00570000079239 EMBL:AAEX03005293
EMBL:AAEX03005294 EMBL:AAEX03005295 EMBL:AAEX03005296
Ensembl:ENSCAFT00000025949 NextBio:20855189 Uniprot:E2QY79
Length = 851
Score = 222 (83.2 bits), Expect = 9.8e-21, Sum P(3) = 9.8e-21
Identities = 46/96 (47%), Positives = 62/96 (64%)
Query: 205 VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 264
VP T+ +G L++ +E+ I PV+ PE F ALG+ P GVLL GPPG GKTLLA+A
Sbjct: 569 VPSVTWADIGALEDIREELTMAILAPVRSPEQFRALGLMTPAGVLLAGPPGCGKTLLAKA 628
Query: 265 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
VA+ + FI V G EL+ ++GE R VR++F A
Sbjct: 629 VANESGLNFISVKGPELLNMYVGESERAVRQVFQRA 664
Score = 199 (75.1 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 39/91 (42%), Positives = 61/91 (67%)
Query: 210 YEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 269
+E VGG D +KE+ +++ + ++HPE++ LG P+GVLL+GPPG GKTLLA A+A
Sbjct: 258 FEDVGGNDATLKEVCKML-IHMRHPEVYHHLGAVPPRGVLLHGPPGCGKTLLAHAIAGEL 316
Query: 270 ECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
+ ++V+ +E+V GE + +RELF A
Sbjct: 317 DLPILKVAATEVVSGVSGESEQKLRELFEQA 347
Score = 85 (35.0 bits), Expect = 9.8e-21, Sum P(3) = 9.8e-21
Identities = 18/44 (40%), Positives = 27/44 (61%)
Query: 13 GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
GKTLLA A+A + ++V+ +E+V GE + +RELF A
Sbjct: 304 GKTLLAHAIAGELDLPILKVAATEVVSGVSGESEQKLRELFEQA 347
Score = 38 (18.4 bits), Expect = 9.8e-21, Sum P(3) = 9.8e-21
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 362 RTMLELLNQLDGFEA 376
R + +LL ++DG EA
Sbjct: 694 RVVNQLLTEMDGLEA 708
>UNIPROTKB|J9P5D7 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 OMA:NDMTLKE GeneTree:ENSGT00570000079239
EMBL:AAEX03005293 EMBL:AAEX03005294 EMBL:AAEX03005295
EMBL:AAEX03005296 Ensembl:ENSCAFT00000049264 Uniprot:J9P5D7
Length = 855
Score = 222 (83.2 bits), Expect = 1.0e-20, Sum P(3) = 1.0e-20
Identities = 46/96 (47%), Positives = 62/96 (64%)
Query: 205 VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 264
VP T+ +G L++ +E+ I PV+ PE F ALG+ P GVLL GPPG GKTLLA+A
Sbjct: 574 VPSVTWADIGALEDIREELTMAILAPVRSPEQFRALGLMTPAGVLLAGPPGCGKTLLAKA 633
Query: 265 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
VA+ + FI V G EL+ ++GE R VR++F A
Sbjct: 634 VANESGLNFISVKGPELLNMYVGESERAVRQVFQRA 669
Score = 199 (75.1 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 39/91 (42%), Positives = 61/91 (67%)
Query: 210 YEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 269
+E VGG D +KE+ +++ + ++HPE++ LG P+GVLL+GPPG GKTLLA A+A
Sbjct: 258 FEDVGGNDATLKEVCKML-IHMRHPEVYHHLGAVPPRGVLLHGPPGCGKTLLAHAIAGEL 316
Query: 270 ECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
+ ++V+ +E+V GE + +RELF A
Sbjct: 317 DLPILKVAATEVVSGVSGESEQKLRELFEQA 347
Score = 85 (35.0 bits), Expect = 1.0e-20, Sum P(3) = 1.0e-20
Identities = 18/44 (40%), Positives = 27/44 (61%)
Query: 13 GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
GKTLLA A+A + ++V+ +E+V GE + +RELF A
Sbjct: 304 GKTLLAHAIAGELDLPILKVAATEVVSGVSGESEQKLRELFEQA 347
Score = 38 (18.4 bits), Expect = 1.0e-20, Sum P(3) = 1.0e-20
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 362 RTMLELLNQLDGFEA 376
R + +LL ++DG EA
Sbjct: 699 RVVNQLLTEMDGLEA 713
>DICTYBASE|DDB_G0282181 [details] [associations]
symbol:nvl "valosin-containing protein" species:44689
"Dictyostelium discoideum" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;ISS] [GO:0000055 "ribosomal large subunit
export from nucleus" evidence=ISS] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
dictyBase:DDB_G0282181 GO:GO:0005524 GO:GO:0005730
GenomeReviews:CM000152_GR EMBL:AAFI02000045 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0000055 KO:K14571
RefSeq:XP_640327.1 ProteinModelPortal:Q54SY2
EnsemblProtists:DDB0237516 GeneID:8623428 KEGG:ddi:DDB_G0282181
InParanoid:Q54SY2 OMA:KQIQYYK ProtClustDB:CLSZ2846768
Uniprot:Q54SY2
Length = 867
Score = 229 (85.7 bits), Expect = 1.2e-20, Sum P(3) = 1.2e-20
Identities = 45/110 (40%), Positives = 67/110 (60%)
Query: 192 KVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLY 251
KV P +P+ T++ VG L +E+ I P+++P+ + +GI P GVL+Y
Sbjct: 547 KVVPAAKREGFATIPNVTWDDVGALSGVREELTNSILRPIRYPKKYKNMGIDSPAGVLMY 606
Query: 252 GPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAS 301
GPPG GKTLLA+A+A + FI V G EL+ K++GE R VR++F A+
Sbjct: 607 GPPGCGKTLLAKAIASECQANFISVKGPELLNKYVGESERAVRQVFQRAA 656
Score = 203 (76.5 bits), Expect = 5.5e-13, Sum P(2) = 5.5e-13
Identities = 36/93 (38%), Positives = 59/93 (63%)
Query: 205 VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 264
+P + +GG+++ +++I+E IE P+ HPE++ LG+ P+G+LL+GP G GKTLLA+A
Sbjct: 210 IPTINFSNLGGVESCLRDIREHIEYPICHPEIYSHLGVEPPRGILLHGPSGCGKTLLAKA 269
Query: 265 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 297
+A + +S +E+ GE VR LF
Sbjct: 270 IAGELKVPLFAISATEITSGVSGESEARVRTLF 302
Score = 119 (46.9 bits), Expect = 0.00067, P = 0.00067
Identities = 29/69 (42%), Positives = 39/69 (56%)
Query: 13 GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMDV 72
GKTLLA+A+A + FI V G EL+ K++GE R VR++F R SS FF D
Sbjct: 612 GKTLLAKAIASECQANFISVKGPELLNKYVGESERAVRQVF--QRAAASSPCVIFF--DE 667
Query: 73 DEAIKSSEG 81
+A+ G
Sbjct: 668 FDALAPKRG 676
Score = 73 (30.8 bits), Expect = 1.2e-20, Sum P(3) = 1.2e-20
Identities = 16/41 (39%), Positives = 22/41 (53%)
Query: 13 GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 53
GKTLLA+A+A + +S +E+ GE VR LF
Sbjct: 262 GKTLLAKAIAGELKVPLFAISATEITSGVSGESEARVRTLF 302
Score = 38 (18.4 bits), Expect = 1.2e-20, Sum P(3) = 1.2e-20
Identities = 9/43 (20%), Positives = 16/43 (37%)
Query: 333 APSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFE 375
+P +IF +R + +LL ++DG E
Sbjct: 659 SPCVIFFDEFDALAPKRGGGDGGGNQATERVVNQLLTEMDGLE 701
>RGD|1311270 [details] [associations]
symbol:Nvl "nuclear VCP-like" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0016235 "aggresome"
evidence=IEA;ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1311270 GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
GO:GO:0017111 KO:K14571 EMBL:CH473985 CTD:4931 OMA:NDMTLKE
OrthoDB:EOG4ZPDTN GeneTree:ENSGT00570000079239 IPI:IPI00371541
RefSeq:NP_001099450.1 UniGene:Rn.8896 Ensembl:ENSRNOT00000004927
GeneID:289323 KEGG:rno:289323 UCSC:RGD:1311270 NextBio:629627
Uniprot:D3ZTY9
Length = 855
Score = 227 (85.0 bits), Expect = 1.4e-20, Sum P(2) = 1.4e-20
Identities = 47/96 (48%), Positives = 64/96 (66%)
Query: 205 VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 264
VP+ T+ VG L++ +E+ I PV++PE F ALG+ P GVLL GPPG GKTLLA+A
Sbjct: 574 VPNVTWADVGALEDIREELTMAILAPVRNPEQFRALGLVAPAGVLLAGPPGCGKTLLAKA 633
Query: 265 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
VA+ + FI V G EL+ ++GE R VR++F A
Sbjct: 634 VANESGLNFISVKGPELLNMYVGESERAVRQVFQRA 669
Score = 199 (75.1 bits), Expect = 7.0e-13, P = 7.0e-13
Identities = 38/91 (41%), Positives = 61/91 (67%)
Query: 210 YEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 269
+E VGG D +KE+ +++ + ++HPE++ LG+ P+GVLL+GPPG GKTLLA A+A
Sbjct: 263 FEDVGGNDATLKEVCKML-IHMRHPEVYQHLGVVPPRGVLLHGPPGCGKTLLAHAIAGEL 321
Query: 270 ECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
+ ++V+ E+V GE + +R+LF A
Sbjct: 322 DLPILKVAAPEIVSGVSGESEQKLRDLFDQA 352
Score = 80 (33.2 bits), Expect = 1.4e-20, Sum P(2) = 1.4e-20
Identities = 17/44 (38%), Positives = 26/44 (59%)
Query: 13 GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
GKTLLA A+A + ++V+ E+V GE + +R+LF A
Sbjct: 309 GKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRDLFDQA 352
>UNIPROTKB|E2QSC5 [details] [associations]
symbol:SPATA5L1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 Ensembl:ENSCAFT00000021792 Uniprot:E2QSC5
Length = 747
Score = 230 (86.0 bits), Expect = 2.3e-20, Sum P(2) = 2.3e-20
Identities = 54/157 (34%), Positives = 91/157 (57%)
Query: 187 KILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPK 246
KI P+ ++ LM ++ V +E +GGL++ ++K+ IE P+K P F +G+ QPK
Sbjct: 435 KIQPSSFRSVIGLMDIKPVD---WEQIGGLEDVKLKLKQSIEWPLKFPREFVRMGLTQPK 491
Query: 247 GVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLA 306
GVLLYGPPG KT L RA+A C+F+ VSG++L F+G+ +++ + V + A
Sbjct: 492 GVLLYGPPGCAKTTLVRALATSCHCSFVSVSGADLFSPFVGDSEKVLSQQKVF----RQA 547
Query: 307 FAHHPLLFW--SLLTILTNTIV----CNFREHAPSII 337
A+ P + + + +IL + + CN +E S++
Sbjct: 548 RANTPAIVFLDEIDSILGSRSISKTECNVQERVLSVL 584
Score = 176 (67.0 bits), Expect = 4.0e-10, Sum P(2) = 4.0e-10
Identities = 42/102 (41%), Positives = 56/102 (54%)
Query: 213 VGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECT 272
+GGL ++E++ LP+++P ALG+A P+GVLL GPPG GKT L RAVA
Sbjct: 192 LGGLSEAADSLRELLRLPLRYPRTLAALGLAVPRGVLLAGPPGVGKTQLVRAVAREAGAE 251
Query: 273 FIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAFAHHPLLF 314
+ VS L GE VR +F A ++LA LLF
Sbjct: 252 LLAVSAPALQGARPGETEENVRRVFGRA--RELASRGPTLLF 291
Score = 72 (30.4 bits), Expect = 2.3e-20, Sum P(2) = 2.3e-20
Identities = 24/69 (34%), Positives = 31/69 (44%)
Query: 13 GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMDV 72
GKT L RAVA + VS L GE VR +F AR + +SRG +D
Sbjct: 236 GKTQLVRAVAREAGAELLAVSAPALQGARPGETEENVRRVFGRAR-ELASRGPTLLFLDE 294
Query: 73 DEAIKSSEG 81
+A+ G
Sbjct: 295 VDALCPRRG 303
Score = 40 (19.1 bits), Expect = 4.0e-10, Sum P(2) = 4.0e-10
Identities = 11/44 (25%), Positives = 18/44 (40%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDG 373
R + P+I+F+ +R + LLN+LDG
Sbjct: 548 RANTPAIVFLDEIDSILGSRSISKTECNVQ-ERVLSVLLNELDG 590
>CGD|CAL0002187 [details] [associations]
symbol:orf19.6432 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0030687 "preribosome, large subunit
precursor" evidence=IEA] [GO:0042493 "response to drug"
evidence=IEA] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
CGD:CAL0002187 GO:GO:0005524 EMBL:AACQ01000073 EMBL:AACQ01000072
eggNOG:COG0464 KO:K14575 GO:GO:0017111 InterPro:IPR009010
SUPFAM:SSF50692 SMART:SM01073 RefSeq:XP_716187.1 RefSeq:XP_716270.1
ProteinModelPortal:Q5A331 GeneID:3642106 GeneID:3642160
KEGG:cal:CaO19.13790 KEGG:cal:CaO19.6432 Uniprot:Q5A331
Length = 766
Score = 237 (88.5 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
Identities = 43/90 (47%), Positives = 63/90 (70%)
Query: 209 TYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH 268
TY+ VGGL QI+ +K IELP+ +P LF GI+ P+G+LL+GPPGTGKT+L R VA+
Sbjct: 227 TYDQVGGLSKQIELLKSTIELPLNNPTLFSDFGISPPRGILLHGPPGTGKTMLLRCVANS 286
Query: 269 -TECTFIRVSGSELVQKFIGEGSRMVRELF 297
TE + ++G +V K++GE +R++F
Sbjct: 287 ITEAHVLTINGPSIVSKYLGETENAIRDIF 316
Score = 213 (80.0 bits), Expect = 2.4e-20, Sum P(3) = 2.4e-20
Identities = 41/113 (36%), Positives = 70/113 (61%)
Query: 185 LHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQ 244
++ LP ++ P + ++P + +GG + +++ EV++LP++ + F LG++
Sbjct: 474 VYHALP-EIRPSAMREIFLEMPKVHWSDIGGQEELKRKLIEVVQLPLEASDSFKNLGVSS 532
Query: 245 PKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 297
PKGVLLYGPPG KTL A+A+A + F+ V G E+ K++GE R +RE+F
Sbjct: 533 PKGVLLYGPPGCSKTLTAKALATESGLNFLAVKGPEIFNKYVGESERAIREIF 585
Score = 86 (35.3 bits), Expect = 2.4e-20, Sum P(3) = 2.4e-20
Identities = 17/47 (36%), Positives = 30/47 (63%)
Query: 12 SGKTLLARAVAHH-TECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GKT+L R VA+ TE + ++G +V K++GE +R++F A+
Sbjct: 274 TGKTMLLRCVANSITEAHVLTINGPSIVSKYLGETENAIRDIFNEAK 320
Score = 44 (20.5 bits), Expect = 2.4e-20, Sum P(3) = 2.4e-20
Identities = 13/49 (26%), Positives = 17/49 (34%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEATK 378
R +PSIIF + LLN++DG E K
Sbjct: 589 RAASPSIIFFDEIDAIAGDRDGDSSTTAAS--NVLTSLLNEIDGVEELK 635
>TAIR|locus:2044209 [details] [associations]
symbol:CDC48B "cell division cycle 48B" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0051301 GO:GO:0005856 GO:GO:0015031 GO:GO:0007049
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0017111 EMBL:AC006836
GO:GO:0009524 EMBL:AY062443 EMBL:BT008371 IPI:IPI00527776
PIR:A84451 RefSeq:NP_178463.1 UniGene:At.27340
ProteinModelPortal:Q9ZPR1 SMR:Q9ZPR1 PaxDb:Q9ZPR1 PRIDE:Q9ZPR1
EnsemblPlants:AT2G03670.1 GeneID:814895 KEGG:ath:AT2G03670
GeneFarm:1901 TAIR:At2g03670 InParanoid:Q9ZPR1 OMA:RECNAHL
PhylomeDB:Q9ZPR1 ProtClustDB:CLSN2683845 Genevestigator:Q9ZPR1
GermOnline:AT2G03670 Uniprot:Q9ZPR1
Length = 603
Score = 219 (82.2 bits), Expect = 3.3e-20, Sum P(3) = 3.3e-20
Identities = 42/116 (36%), Positives = 72/116 (62%)
Query: 187 KILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPK 246
KI + V P ++ + ++P T++ VGGL + K++++ +E P+KH F +GI+ +
Sbjct: 262 KIAKSVVGPSINRGITVEIPKVTWDDVGGLKDLKKKLQQAVEWPIKHSAAFVKMGISPMR 321
Query: 247 GVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASL 302
G+LL+GPPG KT LA+A A+ + +F +S +EL ++GEG ++R F A L
Sbjct: 322 GILLHGPPGCSKTTLAKAAANAAQASFFSLSCAELFSMYVGEGEALLRNTFQRARL 377
Score = 169 (64.5 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 34/89 (38%), Positives = 53/89 (59%)
Query: 213 VGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECT 272
+GG + ++ ++E+I P ++P LG+ P+G+LLYGPPGTGKT L RAV +
Sbjct: 24 IGGNERALQALRELIIFPFRYPLEARTLGLKWPRGLLLYGPPGTGKTSLVRAVVQECDAH 83
Query: 273 FIRVSGSELVQKFIGEGSRMVRELFVMAS 301
I +S + + GE +++RE F AS
Sbjct: 84 LIVLSPHSVHRAHAGESEKVLREAFAEAS 112
Score = 66 (28.3 bits), Expect = 3.3e-20, Sum P(3) = 3.3e-20
Identities = 18/63 (28%), Positives = 30/63 (47%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKG-SSRGTEFFTM 70
+GKT L RAV + I +S + + GE +++RE F A S + + F
Sbjct: 67 TGKTSLVRAVVQECDAHLIVLSPHSVHRAHAGESEKVLREAFAEASSHAVSDKPSVIFID 126
Query: 71 DVD 73
++D
Sbjct: 127 EID 129
Score = 49 (22.3 bits), Expect = 3.3e-20, Sum P(3) = 3.3e-20
Identities = 17/60 (28%), Positives = 23/60 (38%)
Query: 320 ILTNTIVCNFREHAPSIIFMXXXXXXXXXXXXXXXXXXXXV-QRTMLELLNQLDGFEATK 378
+L NT R +PSIIF V +R + LL ++DG E K
Sbjct: 367 LLRNTFQ-RARLASPSIIFFDEADVVACKRGDESSSNSSTVGERLLSTLLTEMDGLEEAK 425
>ZFIN|ZDB-GENE-060929-204 [details] [associations]
symbol:spata5l1 "spermatogenesis associated 5-like
1" species:7955 "Danio rerio" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-060929-204 GO:GO:0005524
GeneTree:ENSGT00700000104502 GO:GO:0017111 CTD:79029 EMBL:CU929075
EMBL:CU595864 IPI:IPI00804177 RefSeq:NP_001070056.2
UniGene:Dr.80583 Ensembl:ENSDART00000101660
Ensembl:ENSDART00000129459 GeneID:767648 KEGG:dre:767648
NextBio:20918042 Uniprot:F1Q8W3
Length = 748
Score = 220 (82.5 bits), Expect = 4.2e-20, Sum P(3) = 4.2e-20
Identities = 38/91 (41%), Positives = 62/91 (68%)
Query: 210 YEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 269
+E +GGL++ ++K+ IE P++ PE F LG+++P+GVLLYGPPG KT L +A A +
Sbjct: 451 WEQIGGLEDVKLKLKQSIEWPMRFPEAFVRLGVSRPRGVLLYGPPGCAKTTLVKAAASSS 510
Query: 270 ECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
C+F +SG+EL ++G+ + + +LF A
Sbjct: 511 HCSFFSLSGAELFSPYVGDSEKTLAQLFAQA 541
Score = 173 (66.0 bits), Expect = 7.2e-10, Sum P(2) = 7.2e-10
Identities = 34/88 (38%), Positives = 52/88 (59%)
Query: 213 VGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECT 272
+GG+++ +KE+I P+++P LG++ P+G+LL GPPG GKTLL R VA T
Sbjct: 189 LGGMEDVFASLKEMITFPLRYPGSLRQLGLSCPRGLLLIGPPGVGKTLLVRCVAKDIGAT 248
Query: 273 FIRVSGSELVQKFIGEGSRMVRELFVMA 300
+ V+G E+ GE +R +F A
Sbjct: 249 LVTVNGPEVTGSRPGESEENLRRVFEQA 276
Score = 76 (31.8 bits), Expect = 4.2e-20, Sum P(3) = 4.2e-20
Identities = 18/45 (40%), Positives = 23/45 (51%)
Query: 13 GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
GKTLL R VA T + V+G E+ GE +R +F AR
Sbjct: 233 GKTLLVRCVAKDIGATLVTVNGPEVTGSRPGESEENLRRVFEQAR 277
Score = 41 (19.5 bits), Expect = 4.2e-20, Sum P(3) = 4.2e-20
Identities = 11/44 (25%), Positives = 16/44 (36%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDG 373
R APSI+F+ + + LL +LDG
Sbjct: 542 RACAPSIVFLDEVDSMVGSREDGSSSSHSVQSQVLSVLLTELDG 585
>UNIPROTKB|F1NG80 [details] [associations]
symbol:SPATA5L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GeneTree:ENSGT00700000104502 GO:GO:0017111 OMA:TWEQIGG
EMBL:AADN02041604 IPI:IPI00596203 Ensembl:ENSGALT00000009112
Uniprot:F1NG80
Length = 748
Score = 223 (83.6 bits), Expect = 4.7e-20, Sum P(3) = 4.7e-20
Identities = 43/114 (37%), Positives = 72/114 (63%)
Query: 187 KILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPK 246
KI P+ + L + + T+E +GGL++ ++K+ +E P+K P+ F +G+A+PK
Sbjct: 442 KIQPSSFRSAIGLKECKPI---TWEQIGGLEDVKLKLKQSVEWPMKLPQAFARMGLARPK 498
Query: 247 GVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
GVLLYGP G KT L +AVA C+F+ VSG+EL ++G+ +++ ++F A
Sbjct: 499 GVLLYGPSGCAKTTLVKAVATSCHCSFLSVSGAELFSPYVGDSEKILSQVFRQA 552
Score = 179 (68.1 bits), Expect = 8.8e-11, Sum P(2) = 8.8e-11
Identities = 38/106 (35%), Positives = 60/106 (56%)
Query: 193 VDPLVSLMMVEKVPDSTYEM-VGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLY 251
+ +++L + + T ++ V GLD+ + +KE+++LP + P F LG++ P GVLL
Sbjct: 178 IKEVITLERYRLLTEDTAKIPVAGLDDVGESLKEMVDLPFRFPRTFKKLGLSVPNGVLLV 237
Query: 252 GPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 297
GPPG GKTLL +AVA + +SG L GE +R +F
Sbjct: 238 GPPGVGKTLLVKAVAREAGAYLLCISGPALYGSRPGESEENLRSVF 283
Score = 69 (29.3 bits), Expect = 4.7e-20, Sum P(3) = 4.7e-20
Identities = 19/61 (31%), Positives = 26/61 (42%)
Query: 13 GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMDV 72
GKTLL +AVA + +SG L GE +R +F R T F ++
Sbjct: 243 GKTLLVKAVAREAGAYLLCISGPALYGSRPGESEENLRSVFEKGREMSCEGPTVLFIDEI 302
Query: 73 D 73
D
Sbjct: 303 D 303
Score = 43 (20.2 bits), Expect = 4.7e-20, Sum P(3) = 4.7e-20
Identities = 12/44 (27%), Positives = 18/44 (40%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDG 373
R + P+IIF+ +R + LLN+LDG
Sbjct: 553 RANTPAIIFLDEIDSILGSRSHSKSGHGVS-ERVLSVLLNELDG 595
>DICTYBASE|DDB_G0292788 [details] [associations]
symbol:pex6 "peroxin 6" species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0007031 "peroxisome
organization" evidence=IEA;ISS] [GO:0005777 "peroxisome"
evidence=IEA;ISS] [GO:0016020 "membrane" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005778 "peroxisomal membrane"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0292788 GO:GO:0005524 GenomeReviews:CM000155_GR
GO:GO:0005777 GO:GO:0007031 GO:GO:0005778 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 EMBL:AAFI02000196 KO:K13339
RefSeq:XP_629463.1 ProteinModelPortal:Q54CS8
EnsemblProtists:DDB0238049 GeneID:8628853 KEGG:ddi:DDB_G0292788
OMA:ANRIKIS Uniprot:Q54CS8
Length = 1201
Score = 249 (92.7 bits), Expect = 7.9e-20, P = 7.9e-20
Identities = 56/134 (41%), Positives = 82/134 (61%)
Query: 173 NCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVK 232
NC + + + K L + S + K+P+ +++ VGGL N EI + I+LP++
Sbjct: 883 NCGFLVMGDD--IQKSLSEMQEYQSSSIGAPKIPNVSWDDVGGLANVKSEIMDTIQLPLE 940
Query: 233 HPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECT--FIRVSGSELVQKFIGEGS 290
HP LF A GI + G+LL+GPPGTGKTLLA+A+A TEC+ F+ V G EL+ +IGE
Sbjct: 941 HPHLF-ASGIGKRSGILLFGPPGTGKTLLAKAIA--TECSLNFLSVKGPELINMYIGESE 997
Query: 291 RMVRELFVMASLKK 304
+ +RE+F A K
Sbjct: 998 KNIREIFNKARQAK 1011
>GENEDB_PFALCIPARUM|PF07_0047 [details] [associations]
symbol:PF07_0047 "cell division cycle ATPase,
putative" species:5833 "Plasmodium falciparum" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0016887 GO:GO:0007049 GO:GO:0051726 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 PANTHER:PTHR23077:SF18
SMART:SM01073 EMBL:AL844506 EMBL:M96757 RefSeq:XP_001349023.1
ProteinModelPortal:P46468 IntAct:P46468 MINT:MINT-1593477
PRIDE:P46468 EnsemblProtists:PF07_0047:mRNA GeneID:2655095
KEGG:pfa:PF07_0047 EuPathDB:PlasmoDB:PF3D7_0711000 Uniprot:P46468
Length = 1229
Score = 247 (92.0 bits), Expect = 1.3e-19, P = 1.3e-19
Identities = 46/101 (45%), Positives = 73/101 (72%)
Query: 203 EKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 262
E D TYE +GG+ Q+ +I+E+IELP+K+PE+F ++GI+ PKGVL++G PGTGKT +A
Sbjct: 519 ENNDDITYEDLGGMKKQLNKIRELIELPLKYPEIFMSIGISAPKGVLMHGIPGTGKTSIA 578
Query: 263 RAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLK 303
+A+A+ + ++G E++ K IGE + +R++F AS K
Sbjct: 579 KAIANESNAYCYIINGPEIMSKHIGESEQKLRKIFKKASEK 619
Score = 206 (77.6 bits), Expect = 2.6e-17, Sum P(2) = 2.6e-17
Identities = 41/95 (43%), Positives = 62/95 (65%)
Query: 204 KVPDSTYEMVGGLDNQIKE-IKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 262
++P T+ +GG+ N++KE +KE I P+++ L++ KG+LLYGPPG GKTLLA
Sbjct: 927 QIPTVTWNDIGGM-NEVKEQLKETILYPLEYKHLYNKFNSNYNKGILLYGPPGCGKTLLA 985
Query: 263 RAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 297
+A+A+ + FI V G EL+ + GE VR+LF
Sbjct: 986 KAIANECKANFISVKGPELLTMWFGESEANVRDLF 1020
Score = 80 (33.2 bits), Expect = 2.6e-17, Sum P(2) = 2.6e-17
Identities = 15/45 (33%), Positives = 29/45 (64%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKT +A+A+A+ + ++G E++ K IGE + +R++F A
Sbjct: 572 TGKTSIAKAIANESNAYCYIINGPEIMSKHIGESEQKLRKIFKKA 616
Score = 39 (18.8 bits), Expect = 4.7e-13, Sum P(2) = 4.7e-13
Identities = 10/42 (23%), Positives = 20/42 (47%)
Query: 72 VDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNE 113
+ +AI + Y + E + + E EQ LR++ + +E
Sbjct: 577 IAKAIANESNAYCYIINGPEIMSKHIGESEQKLRKIFKKASE 618
>UNIPROTKB|P46468 [details] [associations]
symbol:PF07_0047 "Putative cell division cycle ATPase"
species:36329 "Plasmodium falciparum 3D7" [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0016887
GO:GO:0007049 GO:GO:0051726 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 PANTHER:PTHR23077:SF18 SMART:SM01073 EMBL:AL844506
EMBL:M96757 RefSeq:XP_001349023.1 ProteinModelPortal:P46468
IntAct:P46468 MINT:MINT-1593477 PRIDE:P46468
EnsemblProtists:PF07_0047:mRNA GeneID:2655095 KEGG:pfa:PF07_0047
EuPathDB:PlasmoDB:PF3D7_0711000 Uniprot:P46468
Length = 1229
Score = 247 (92.0 bits), Expect = 1.3e-19, P = 1.3e-19
Identities = 46/101 (45%), Positives = 73/101 (72%)
Query: 203 EKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 262
E D TYE +GG+ Q+ +I+E+IELP+K+PE+F ++GI+ PKGVL++G PGTGKT +A
Sbjct: 519 ENNDDITYEDLGGMKKQLNKIRELIELPLKYPEIFMSIGISAPKGVLMHGIPGTGKTSIA 578
Query: 263 RAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLK 303
+A+A+ + ++G E++ K IGE + +R++F AS K
Sbjct: 579 KAIANESNAYCYIINGPEIMSKHIGESEQKLRKIFKKASEK 619
Score = 206 (77.6 bits), Expect = 2.6e-17, Sum P(2) = 2.6e-17
Identities = 41/95 (43%), Positives = 62/95 (65%)
Query: 204 KVPDSTYEMVGGLDNQIKE-IKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 262
++P T+ +GG+ N++KE +KE I P+++ L++ KG+LLYGPPG GKTLLA
Sbjct: 927 QIPTVTWNDIGGM-NEVKEQLKETILYPLEYKHLYNKFNSNYNKGILLYGPPGCGKTLLA 985
Query: 263 RAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 297
+A+A+ + FI V G EL+ + GE VR+LF
Sbjct: 986 KAIANECKANFISVKGPELLTMWFGESEANVRDLF 1020
Score = 80 (33.2 bits), Expect = 2.6e-17, Sum P(2) = 2.6e-17
Identities = 15/45 (33%), Positives = 29/45 (64%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+GKT +A+A+A+ + ++G E++ K IGE + +R++F A
Sbjct: 572 TGKTSIAKAIANESNAYCYIINGPEIMSKHIGESEQKLRKIFKKA 616
Score = 39 (18.8 bits), Expect = 4.7e-13, Sum P(2) = 4.7e-13
Identities = 10/42 (23%), Positives = 20/42 (47%)
Query: 72 VDEAIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRLQAQRNE 113
+ +AI + Y + E + + E EQ LR++ + +E
Sbjct: 577 IAKAIANESNAYCYIINGPEIMSKHIGESEQKLRKIFKKASE 618
>UNIPROTKB|Q13608 [details] [associations]
symbol:PEX6 "Peroxisome assembly factor 2" species:9606
"Homo sapiens" [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0007031 "peroxisome
organization" evidence=IMP] [GO:0016887 "ATPase activity"
evidence=IMP] [GO:0008022 "protein C-terminus binding"
evidence=IPI] [GO:0005777 "peroxisome" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006625 "protein targeting to
peroxisome" evidence=IMP] [GO:0032403 "protein complex binding"
evidence=IDA] [GO:0016561 "protein import into peroxisome matrix,
translocation" evidence=IMP] [GO:0050821 "protein stabilization"
evidence=IMP] [GO:0005524 "ATP binding" evidence=IMP] [GO:0042623
"ATPase activity, coupled" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0006200 "ATP catabolic process"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0050821 GO:GO:0005777
GO:GO:0032403 GO:GO:0005778 eggNOG:COG0464 GO:GO:0042623
Orphanet:912 TCDB:3.A.20.1.1 Orphanet:772 Orphanet:44 GO:GO:0016561
HOGENOM:HOG000241031 KO:K13339 EMBL:U56602 EMBL:D83703
EMBL:AF108098 EMBL:AF108095 EMBL:AF108096 EMBL:AF108097
EMBL:AB051076 EMBL:BC048331 IPI:IPI00299182 PIR:S71090
RefSeq:NP_000278.3 UniGene:Hs.656425 ProteinModelPortal:Q13608
SMR:Q13608 IntAct:Q13608 MINT:MINT-1183928 STRING:Q13608
PhosphoSite:Q13608 DMDM:12644408 PaxDb:Q13608 PRIDE:Q13608
Ensembl:ENST00000304611 GeneID:5190 KEGG:hsa:5190 UCSC:uc003otf.3
CTD:5190 GeneCards:GC06M042978 HGNC:HGNC:8859 HPA:HPA025924
MIM:601498 MIM:614862 MIM:614863 neXtProt:NX_Q13608
PharmGKB:PA33201 HOVERGEN:HBG002311 InParanoid:Q13608 OMA:SWHDVGG
OrthoDB:EOG47WNNP PhylomeDB:Q13608 GenomeRNAi:5190 NextBio:20072
ArrayExpress:Q13608 Bgee:Q13608 CleanEx:HS_PEX6
Genevestigator:Q13608 GermOnline:ENSG00000124587 Uniprot:Q13608
Length = 980
Score = 238 (88.8 bits), Expect = 2.1e-19, Sum P(3) = 2.1e-19
Identities = 51/99 (51%), Positives = 69/99 (69%)
Query: 204 KVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLAR 263
K+P ++ VGGL KEI E I+LP++HPEL +LG+ + G+LL+GPPGTGKTLLA+
Sbjct: 698 KIPSVSWHDVGGLQEVKKEILETIQLPLEHPELL-SLGLRR-SGLLLHGPPGTGKTLLAK 755
Query: 264 AVAHHTEC--TFIRVSGSELVQKFIGEGSRMVRELFVMA 300
AVA TEC TF+ V G EL+ ++G+ VRE+F A
Sbjct: 756 AVA--TECSLTFLSVKGPELINMYVGQSEENVREVFARA 792
Score = 44 (20.5 bits), Expect = 2.1e-19, Sum P(3) = 2.1e-19
Identities = 13/48 (27%), Positives = 21/48 (43%)
Query: 13 GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR-CK 59
GKT + A H ++V S L + G ++ +F AR C+
Sbjct: 475 GKTTVVAAACSHLGLHLLKVPCSSLCAESSGAVETKLQAIFSRARRCR 522
Score = 40 (19.1 bits), Expect = 2.1e-19, Sum P(3) = 2.1e-19
Identities = 13/49 (26%), Positives = 19/49 (38%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEATK 378
R AP IIF + R + +LL +LDG +T+
Sbjct: 793 RAAAPCIIFFDELDSLAPSRGRSGDSGGV-MDRVVSQLLAELDGLHSTQ 840
>SGD|S000006377 [details] [associations]
symbol:VPS4 "AAA-ATPase involved in multivesicular body (MVB)
protein sorting" species:4932 "Saccharomyces cerevisiae"
[GO:0042803 "protein homodimerization activity" evidence=IDA]
[GO:0045053 "protein retention in Golgi apparatus" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA;IMP;IDA] [GO:0015031
"protein transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA;IDA] [GO:0070676 "intralumenal vesicle formation"
evidence=IMP] [GO:0045324 "late endosome to vacuole transport"
evidence=IMP;IPI] [GO:0016887 "ATPase activity" evidence=IMP;IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005768
"endosome" evidence=IEA;IDA] [GO:0006810 "transport" evidence=IEA]
[GO:0010008 "endosome membrane" evidence=IEA] [GO:0032511 "late
endosome to vacuole transport via multivesicular body sorting
pathway" evidence=IMP] [GO:0016125 "sterol metabolic process"
evidence=IGI;IMP] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0051260 "protein
homooligomerization" evidence=IDA] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000006377
GO:GO:0005783 GO:GO:0005524 GO:GO:0042803 GO:GO:0016020
GO:GO:0015031 GO:GO:0005768 GO:GO:0051260 GO:GO:0016887
GO:GO:0010008 EMBL:BK006949 Pfam:PF04212 eggNOG:COG0464
InterPro:IPR015415 Pfam:PF09336 GO:GO:0016125 EMBL:U25842
SMART:SM00745 GO:GO:0032511 GO:GO:0045053 PDB:2V6X PDBsum:2V6X
GO:GO:0070676 GeneTree:ENSGT00550000074466 HOGENOM:HOG000225146
KO:K12196 OMA:AKCAEYL OrthoDB:EOG4V1B8K EMBL:X92680 PIR:S59831
RefSeq:NP_015499.1 PDB:2QP9 PDB:2QPA PDB:2RKO PDB:3EIE PDB:3EIH
PDB:3MHV PDBsum:2QP9 PDBsum:2QPA PDBsum:2RKO PDBsum:3EIE
PDBsum:3EIH PDBsum:3MHV ProteinModelPortal:P52917 SMR:P52917
DIP:DIP-1746N IntAct:P52917 MINT:MINT-389240 STRING:P52917
PaxDb:P52917 PeptideAtlas:P52917 EnsemblFungi:YPR173C GeneID:856303
KEGG:sce:YPR173C CYGD:YPR173c EvolutionaryTrace:P52917
NextBio:981664 Genevestigator:P52917 GermOnline:YPR173C
Uniprot:P52917
Length = 437
Score = 232 (86.7 bits), Expect = 2.2e-19, Sum P(3) = 2.2e-19
Identities = 52/110 (47%), Positives = 71/110 (64%)
Query: 196 LVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQP-KGVLLYGPP 254
L S ++ EK P+ +E V GL+ + +KE + LPVK P LF G +P G+LLYGPP
Sbjct: 119 LSSAILSEK-PNVKWEDVAGLEGAKEALKEAVILPVKFPHLFK--GNRKPTSGILLYGPP 175
Query: 255 GTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKK 304
GTGK+ LA+AVA TF VS S+LV K++GE ++V++LF MA K
Sbjct: 176 GTGKSYLAKAVATEANSTFFSVSSSDLVSKWMGESEKLVKQLFAMARENK 225
Score = 120 (47.3 bits), Expect = 0.00020, P = 0.00020
Identities = 28/70 (40%), Positives = 44/70 (62%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GK+ LA+AVA TF VS S+LV K++GE ++V++LF MAR ++ + F +
Sbjct: 177 TGKSYLAKAVATEANSTFFSVSSSDLVSKWMGESEKLVKQLFAMAR---ENKPSIIFIDE 233
Query: 72 VDEAIKSSEG 81
VD A+ + G
Sbjct: 234 VD-ALTGTRG 242
Score = 38 (18.4 bits), Expect = 2.2e-19, Sum P(3) = 2.2e-19
Identities = 13/44 (29%), Positives = 18/44 (40%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDG 373
RE+ PSIIF+ +R ELL Q++G
Sbjct: 222 RENKPSIIFIDEVDALTGTRGEGESEAS---RRIKTELLVQMNG 262
Score = 37 (18.1 bits), Expect = 2.2e-19, Sum P(3) = 2.2e-19
Identities = 12/44 (27%), Positives = 23/44 (52%)
Query: 62 SRGTEFF--TMDVDEAIKSSEGFKPYYVTKIEELQLIVAEKEQN 103
++G E +D+D A + E + YY ++ L L + + E+N
Sbjct: 8 TKGIELVQKAIDLDTATQYEEAYTAYY-NGLDYLMLAL-KYEKN 49
>RGD|1595990 [details] [associations]
symbol:Spata5l1 "spermatogenesis associated 5-like 1"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1595990 GO:GO:0005524 GeneTree:ENSGT00700000104502
GO:GO:0017111 EMBL:CH473949 CTD:79029 OrthoDB:EOG42RD70
IPI:IPI00357915 RefSeq:NP_001103117.1 UniGene:Rn.151898
Ensembl:ENSRNOT00000043414 GeneID:691729 KEGG:rno:691729
UCSC:RGD:1595990 NextBio:743659 Uniprot:D4A2B7
Length = 747
Score = 219 (82.2 bits), Expect = 4.2e-19, Sum P(3) = 4.2e-19
Identities = 41/114 (35%), Positives = 70/114 (61%)
Query: 187 KILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPK 246
K+ P+ + L + V +E +GGL++ ++K+ +E P+K P+ F +G+ QPK
Sbjct: 438 KVQPSSFRSSIGLTDIRPVG---WEQIGGLEDVKLKLKQCVEWPLKFPQEFARMGLTQPK 494
Query: 247 GVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
G+LLYGPPG KT L RA+A C+F+ V G++L F+G+ +++ ++F A
Sbjct: 495 GLLLYGPPGCAKTTLVRALATSCHCSFVSVCGADLFSPFVGDSEKVLSQVFRQA 548
Score = 170 (64.9 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 47/127 (37%), Positives = 65/127 (51%)
Query: 192 KVDPLVSLMMVEKVPDSTY---EM-VGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKG 247
+V P + + +K P E+ +GGL ++E++ LP+ +P ALG+A P+G
Sbjct: 170 RVTPHTRITLSDKPPPQVEPPGEVTLGGLSETADSLRELLRLPLCYPLALAALGLAVPRG 229
Query: 248 VLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLAF 307
VLL GPPG GKT L RAVA + VS L GE VR +F A ++LA
Sbjct: 230 VLLAGPPGVGKTQLVRAVAREAGAELLAVSAPALQGTRPGETEENVRRVFQRA--QELAS 287
Query: 308 AHHPLLF 314
LLF
Sbjct: 288 RGPSLLF 294
Score = 70 (29.7 bits), Expect = 4.2e-19, Sum P(3) = 4.2e-19
Identities = 23/69 (33%), Positives = 31/69 (44%)
Query: 13 GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMDV 72
GKT L RAVA + VS L GE VR +F A+ + +SRG +D
Sbjct: 239 GKTQLVRAVAREAGAELLAVSAPALQGTRPGETEENVRRVFQRAQ-ELASRGPSLLFLDE 297
Query: 73 DEAIKSSEG 81
+A+ G
Sbjct: 298 VDALCPRRG 306
Score = 39 (18.8 bits), Expect = 4.2e-19, Sum P(3) = 4.2e-19
Identities = 10/44 (22%), Positives = 18/44 (40%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDG 373
R + P+++F+ +R + LLN+LDG
Sbjct: 549 RANTPALVFLDEIDSVLGSRSVGSSGCDAR-ERVLSVLLNELDG 591
>MGI|MGI:1914709 [details] [associations]
symbol:Nvl "nuclear VCP-like" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1914709
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0017111 KO:K14571
CTD:4931 HOVERGEN:HBG001226 OMA:NDMTLKE OrthoDB:EOG4ZPDTN
EMBL:AK004676 EMBL:AK054502 EMBL:AK140509 EMBL:BC031847
IPI:IPI00321884 RefSeq:NP_080447.1 UniGene:Mm.263464 PDB:2RRE
PDBsum:2RRE ProteinModelPortal:Q9DBY8 SMR:Q9DBY8 STRING:Q9DBY8
PhosphoSite:Q9DBY8 PaxDb:Q9DBY8 PRIDE:Q9DBY8
Ensembl:ENSMUST00000027797 GeneID:67459 KEGG:mmu:67459
UCSC:uc007dxb.1 GeneTree:ENSGT00570000079239 InParanoid:Q9DBY8
EvolutionaryTrace:Q9DBY8 NextBio:324638 Bgee:Q9DBY8 CleanEx:MM_NVL
Genevestigator:Q9DBY8 GermOnline:ENSMUSG00000026516 Uniprot:Q9DBY8
Length = 855
Score = 214 (80.4 bits), Expect = 4.3e-19, Sum P(2) = 4.3e-19
Identities = 43/96 (44%), Positives = 62/96 (64%)
Query: 205 VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 264
VP+ T+ +G L++ E+ I PV++P+ F LG+ P G+LL GPPG GKTLLA+A
Sbjct: 574 VPNVTWADIGALEDIRDELIMAILAPVRNPDQFRTLGLGTPAGILLAGPPGCGKTLLAKA 633
Query: 265 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
VA+ + FI V G EL+ ++GE R VR++F A
Sbjct: 634 VANESGLNFISVKGPELLNMYVGESERAVRQVFQRA 669
Score = 203 (76.5 bits), Expect = 2.4e-13, P = 2.4e-13
Identities = 39/97 (40%), Positives = 64/97 (65%)
Query: 204 KVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLAR 263
++ + +E VGG D +KE+ +++ + ++HPE++ LG+ P+GVLL+GPPG GKTLLA
Sbjct: 257 QISNVKFEDVGGNDATLKEVCKML-IHMRHPEVYQHLGVVPPRGVLLHGPPGCGKTLLAH 315
Query: 264 AVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
A+A + ++V+ E+V GE + +RELF A
Sbjct: 316 AIAGELDLPILKVAAPEIVSGVSGESEQKLRELFDQA 352
Score = 83 (34.3 bits), Expect = 4.3e-19, Sum P(2) = 4.3e-19
Identities = 18/44 (40%), Positives = 26/44 (59%)
Query: 13 GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
GKTLLA A+A + ++V+ E+V GE + +RELF A
Sbjct: 309 GKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFDQA 352
>CGD|CAL0000992 [details] [associations]
symbol:VPS4 species:5476 "Candida albicans" [GO:0006623
"protein targeting to vacuole" evidence=IMP] [GO:0007033 "vacuole
organization" evidence=IMP] [GO:0044182 "filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:0045324
"late endosome to vacuole transport" evidence=IMP] [GO:0000815
"ESCRT III complex" evidence=ISS] [GO:0009405 "pathogenesis"
evidence=IMP] [GO:0009306 "protein secretion" evidence=IMP]
[GO:0071285 "cellular response to lithium ion" evidence=IMP]
[GO:0030448 "hyphal growth" evidence=IMP] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0045053 "protein retention in Golgi
apparatus" evidence=IEA] [GO:0070676 "intralumenal vesicle
formation" evidence=IEA] [GO:0043328 "protein targeting to vacuole
involved in ubiquitin-dependent protein catabolic process via the
multivesicular body sorting pathway" evidence=IEA] [GO:0016125
"sterol metabolic process" evidence=IEA] [GO:0051260 "protein
homooligomerization" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR007330 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0000992 GO:GO:0005524 GO:GO:0009405 GO:GO:0009306
Pfam:PF04212 eggNOG:COG0464 GO:GO:0017111 InterPro:IPR015415
Pfam:PF09336 GO:GO:0030448 GO:GO:0007033 GO:GO:0006623
GO:GO:0045324 GO:GO:0000815 GO:GO:0071285 EMBL:AACQ01000022
GO:GO:0044182 SMART:SM00745 KO:K12196 RefSeq:XP_720644.1
ProteinModelPortal:Q5AG40 SMR:Q5AG40 STRING:Q5AG40 GeneID:3637703
KEGG:cal:CaO19.4339 Uniprot:Q5AG40
Length = 439
Score = 233 (87.1 bits), Expect = 5.3e-19, Sum P(2) = 5.3e-19
Identities = 51/110 (46%), Positives = 71/110 (64%)
Query: 196 LVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQP-KGVLLYGPP 254
L ++ EK P+ + + GLD + +KE + LPVK P+LF +G +P G+LLYGPP
Sbjct: 121 LAGAILSEK-PNVKWSDIAGLDAAKEALKEAVILPVKFPQLF--VGNRKPTSGILLYGPP 177
Query: 255 GTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKK 304
GTGK+ LA+AVA TF VS S+LV K++GE R+V++LF MA K
Sbjct: 178 GTGKSYLAKAVATEANSTFFSVSSSDLVSKWMGESERLVKQLFTMARENK 227
Score = 120 (47.3 bits), Expect = 0.00020, P = 0.00020
Identities = 24/46 (52%), Positives = 33/46 (71%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GK+ LA+AVA TF VS S+LV K++GE R+V++LF MAR
Sbjct: 179 TGKSYLAKAVATEANSTFFSVSSSDLVSKWMGESERLVKQLFTMAR 224
Score = 44 (20.5 bits), Expect = 5.3e-19, Sum P(2) = 5.3e-19
Identities = 14/49 (28%), Positives = 23/49 (46%)
Query: 62 SRGTEFF--TMDVDEAIKSSEGFKPYYVTKIEELQLIVA-EKEQNLRRL 107
S+G + +D D A + E +K YY ++ L L + EK + L
Sbjct: 9 SKGIDLVQKAIDADTATRYEEAYKLYY-NGLDYLMLAIKYEKNPKSKEL 56
>UNIPROTKB|Q5AG40 [details] [associations]
symbol:VPS4 "Potential vacuolar sorting ATPase"
species:237561 "Candida albicans SC5314" [GO:0000815 "ESCRT III
complex" evidence=ISS] [GO:0006623 "protein targeting to vacuole"
evidence=IMP] [GO:0007033 "vacuole organization" evidence=IMP]
[GO:0009306 "protein secretion" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0030448 "hyphal growth" evidence=IMP] [GO:0044182
"filamentous growth of a population of unicellular organisms"
evidence=IMP] [GO:0045324 "late endosome to vacuole transport"
evidence=IMP] [GO:0071285 "cellular response to lithium ion"
evidence=IMP] InterPro:IPR007330 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0000992 GO:GO:0005524 GO:GO:0009405
GO:GO:0009306 Pfam:PF04212 eggNOG:COG0464 GO:GO:0017111
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030448 GO:GO:0007033
GO:GO:0006623 GO:GO:0045324 GO:GO:0000815 GO:GO:0071285
EMBL:AACQ01000022 GO:GO:0044182 SMART:SM00745 KO:K12196
RefSeq:XP_720644.1 ProteinModelPortal:Q5AG40 SMR:Q5AG40
STRING:Q5AG40 GeneID:3637703 KEGG:cal:CaO19.4339 Uniprot:Q5AG40
Length = 439
Score = 233 (87.1 bits), Expect = 5.3e-19, Sum P(2) = 5.3e-19
Identities = 51/110 (46%), Positives = 71/110 (64%)
Query: 196 LVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQP-KGVLLYGPP 254
L ++ EK P+ + + GLD + +KE + LPVK P+LF +G +P G+LLYGPP
Sbjct: 121 LAGAILSEK-PNVKWSDIAGLDAAKEALKEAVILPVKFPQLF--VGNRKPTSGILLYGPP 177
Query: 255 GTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKK 304
GTGK+ LA+AVA TF VS S+LV K++GE R+V++LF MA K
Sbjct: 178 GTGKSYLAKAVATEANSTFFSVSSSDLVSKWMGESERLVKQLFTMARENK 227
Score = 120 (47.3 bits), Expect = 0.00020, P = 0.00020
Identities = 24/46 (52%), Positives = 33/46 (71%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 57
+GK+ LA+AVA TF VS S+LV K++GE R+V++LF MAR
Sbjct: 179 TGKSYLAKAVATEANSTFFSVSSSDLVSKWMGESERLVKQLFTMAR 224
Score = 44 (20.5 bits), Expect = 5.3e-19, Sum P(2) = 5.3e-19
Identities = 14/49 (28%), Positives = 23/49 (46%)
Query: 62 SRGTEFF--TMDVDEAIKSSEGFKPYYVTKIEELQLIVA-EKEQNLRRL 107
S+G + +D D A + E +K YY ++ L L + EK + L
Sbjct: 9 SKGIDLVQKAIDADTATRYEEAYKLYY-NGLDYLMLAIKYEKNPKSKEL 56
>UNIPROTKB|G4N2E6 [details] [associations]
symbol:MGG_07916 "Vacuolar protein sorting-associated
protein 4" species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR007330 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 EMBL:CM001233 Pfam:PF04212
GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336 KO:K12196
RefSeq:XP_003713158.1 ProteinModelPortal:G4N2E6 SMR:G4N2E6
EnsemblFungi:MGG_07916T0 GeneID:2683843 KEGG:mgr:MGG_07916
Uniprot:G4N2E6
Length = 427
Score = 235 (87.8 bits), Expect = 6.1e-19, Sum P(2) = 6.1e-19
Identities = 48/106 (45%), Positives = 71/106 (66%)
Query: 200 MMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQP-KGVLLYGPPGTGK 258
+++++ P+ +E V GL+ + +KE + LP+K P F G +P KG+LLYGPPGTGK
Sbjct: 114 VVLQERPNVKWEDVAGLEGAKESLKEAVLLPIKFPHFFS--GKRKPWKGILLYGPPGTGK 171
Query: 259 TLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKK 304
+ LA+AVA + TF VS S+LV K++GE R+V++LF MA K
Sbjct: 172 SFLAKAVATEAKSTFFSVSSSDLVSKWMGESERLVKQLFAMARENK 217
Score = 123 (48.4 bits), Expect = 9.0e-05, P = 9.0e-05
Identities = 29/70 (41%), Positives = 45/70 (64%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GK+ LA+AVA + TF VS S+LV K++GE R+V++LF MAR ++ + F +
Sbjct: 169 TGKSFLAKAVATEAKSTFFSVSSSDLVSKWMGESERLVKQLFAMAR---ENKPSIIFIDE 225
Query: 72 VDEAIKSSEG 81
VD A+ + G
Sbjct: 226 VD-ALCGARG 234
Score = 39 (18.8 bits), Expect = 6.1e-19, Sum P(2) = 6.1e-19
Identities = 13/44 (29%), Positives = 18/44 (40%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDG 373
RE+ PSIIF+ +R E+L Q+DG
Sbjct: 214 RENKPSIIFIDEVDALCGARGEGESEAS---RRIKTEMLVQMDG 254
>UNIPROTKB|Q60HE0 [details] [associations]
symbol:PEX6 "Peroxin Pex6p" species:9541 "Macaca
fascicularis" [GO:0005524 "ATP binding" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005777 "peroxisome" evidence=ISS]
[GO:0005829 "cytosol" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0006625 "protein targeting to
peroxisome" evidence=ISS] [GO:0007031 "peroxisome organization"
evidence=ISS] [GO:0008022 "protein C-terminus binding"
evidence=ISS] [GO:0016561 "protein import into peroxisome matrix,
translocation" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0032403 "protein complex binding" evidence=ISS]
[GO:0042623 "ATPase activity, coupled" evidence=ISS] [GO:0050821
"protein stabilization" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0050821
GO:GO:0005777 GO:GO:0032403 GO:GO:0008022 GO:GO:0042623
GO:GO:0016561 HOVERGEN:HBG002311 EMBL:AB125187
ProteinModelPortal:Q60HE0 Uniprot:Q60HE0
Length = 570
Score = 238 (88.8 bits), Expect = 7.1e-19, Sum P(2) = 7.1e-19
Identities = 51/99 (51%), Positives = 69/99 (69%)
Query: 204 KVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLAR 263
K+P ++ VGGL KEI E I+LP++HPEL +LG+ + G+LL+GPPGTGKTLLA+
Sbjct: 288 KIPSVSWHDVGGLQEVKKEILETIQLPLEHPELL-SLGLRR-SGLLLHGPPGTGKTLLAK 345
Query: 264 AVAHHTEC--TFIRVSGSELVQKFIGEGSRMVRELFVMA 300
AVA TEC TF+ V G EL+ ++G+ VRE+F A
Sbjct: 346 AVA--TECSLTFLSVKGPELINMYVGQSEENVREVFARA 382
Score = 40 (19.1 bits), Expect = 7.1e-19, Sum P(2) = 7.1e-19
Identities = 13/49 (26%), Positives = 19/49 (38%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEATK 378
R AP IIF + R + +LL +LDG +T+
Sbjct: 383 RAAAPCIIFFDELDSLAPSRGRSGDSGGV-MDRVVSQLLAELDGLHSTQ 430
>POMBASE|SPAC2G11.06 [details] [associations]
symbol:vps4 "AAA family ATPase Vps4 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=ISS;IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0010008 "endosome membrane" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISM] [GO:0043328 "protein targeting to vacuole
involved in ubiquitin-dependent protein catabolic process via the
multivesicular body sorting pathway" evidence=IMP] [GO:0045053
"protein retention in Golgi apparatus" evidence=ISS] [GO:0045324
"late endosome to vacuole transport" evidence=IMP]
InterPro:IPR007330 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPAC2G11.06 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0016887 GO:GO:0010008
Pfam:PF04212 eggNOG:COG0464 InterPro:IPR015415 Pfam:PF09336
GO:GO:0043328 SMART:SM00745 GO:GO:0045053 HOGENOM:HOG000225146
KO:K12196 OMA:AKCAEYL EMBL:L33456 PIR:T38572 RefSeq:NP_593086.1
ProteinModelPortal:Q09803 SMR:Q09803 STRING:Q09803
EnsemblFungi:SPAC2G11.06.1 GeneID:2542054 KEGG:spo:SPAC2G11.06
OrthoDB:EOG4V1B8K NextBio:20803129 Uniprot:Q09803
Length = 432
Score = 240 (89.5 bits), Expect = 8.7e-19, P = 8.7e-19
Identities = 51/109 (46%), Positives = 73/109 (66%)
Query: 196 LVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPG 255
L S ++VEK P+ ++ + GL+N + +KE + LP+K P+LF G G+LLYGPPG
Sbjct: 115 LTSAILVEK-PNVRWDDIAGLENAKEALKETVLLPIKLPQLFSH-GRKPWSGILLYGPPG 172
Query: 256 TGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKK 304
TGK+ LA+AVA TF +S S+LV K++GE R+VR+LF MA +K
Sbjct: 173 TGKSYLAKAVATEAGSTFFSISSSDLVSKWMGESERLVRQLFEMAREQK 221
Score = 122 (48.0 bits), Expect = 0.00012, P = 0.00012
Identities = 30/71 (42%), Positives = 43/71 (60%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GK+ LA+AVA TF +S S+LV K++GE R+VR+LF MAR + + F +
Sbjct: 173 TGKSYLAKAVATEAGSTFFSISSSDLVSKWMGESERLVRQLFEMAR---EQKPSIIFIDE 229
Query: 72 VDEAIKS-SEG 81
+D S SEG
Sbjct: 230 IDSLCGSRSEG 240
>TAIR|locus:2062274 [details] [associations]
symbol:CCP1 "conserved in ciliated species and in the
land plants 1" species:3702 "Arabidopsis thaliana" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0019538
"protein metabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 Pfam:PF00004 SMART:SM00382 GO:GO:0005524
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0017111 EMBL:AK317096
EMBL:AK317118 IPI:IPI00534781 RefSeq:NP_973600.1 UniGene:At.47485
UniGene:At.61738 ProteinModelPortal:B9DGC0 SMR:B9DGC0 PRIDE:B9DGC0
EnsemblPlants:AT2G34560.2 GeneID:818020 KEGG:ath:AT2G34560
TAIR:At2g34560 OMA:EQNGHAN PhylomeDB:B9DGC0 Genevestigator:Q3EBN1
Uniprot:B9DGC0
Length = 393
Score = 219 (82.2 bits), Expect = 9.6e-19, Sum P(2) = 9.6e-19
Identities = 45/98 (45%), Positives = 68/98 (69%)
Query: 206 PDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQP-KGVLLYGPPGTGKTLLARA 264
P+ +E + GL+N K +KE + +P+K+P F+ G+ P KG+LL+GPPGTGKT+LA+A
Sbjct: 107 PNIKWESIKGLENAKKLLKEAVVMPIKYPTYFN--GLLTPWKGILLFGPPGTGKTMLAKA 164
Query: 265 VAHHTEC--TFIRVSGSELVQKFIGEGSRMVRELFVMA 300
VA TEC TF +S S +V K+ G+ +++R LF +A
Sbjct: 165 VA--TECNTTFFNISASSVVSKWRGDSEKLIRVLFDLA 200
Score = 59 (25.8 bits), Expect = 9.6e-19, Sum P(2) = 9.6e-19
Identities = 15/48 (31%), Positives = 19/48 (39%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEAT 377
R HAPS IF+ +R ELL Q+DG + T
Sbjct: 201 RHHAPSTIFLDEIDAIISQRGGEGRSEHEASRRLKTELLIQMDGLQKT 248
>ASPGD|ASPL0000034586 [details] [associations]
symbol:AN3061 species:162425 "Emericella nidulans"
[GO:0005768 "endosome" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0042803
"protein homodimerization activity" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] [GO:0045053 "protein retention in
Golgi apparatus" evidence=IEA] [GO:0070676 "intralumenal vesicle
formation" evidence=IEA] [GO:0043328 "protein targeting to vacuole
involved in ubiquitin-dependent protein catabolic process via the
multivesicular body sorting pathway" evidence=IEA] [GO:0051260
"protein homooligomerization" evidence=IEA] [GO:0016125 "sterol
metabolic process" evidence=IEA] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:BN001306 EMBL:AACD01000051 Pfam:PF04212 eggNOG:COG0464
GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336 SMART:SM00745
HOGENOM:HOG000225146 KO:K12196 OMA:FTGKRIP OrthoDB:EOG4V1B8K
RefSeq:XP_660665.1 ProteinModelPortal:Q5B8R9 SMR:Q5B8R9
STRING:Q5B8R9 EnsemblFungi:CADANIAT00010018 GeneID:2874497
KEGG:ani:AN3061.2 Uniprot:Q5B8R9
Length = 434
Score = 239 (89.2 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 54/112 (48%), Positives = 72/112 (64%)
Query: 196 LVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQP-KGVLLYGPP 254
L ++ EK P+ +E V GL+ + +KE + LP+K P LF G QP KG+LLYGPP
Sbjct: 118 LAGAILSEK-PNVKWEDVAGLEGAKEALKEAVILPIKFPHLFT--GRRQPWKGILLYGPP 174
Query: 255 GTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLA 306
GTGK+ LA+AVA TF VS S+LV K++GE R+V++LF MA K A
Sbjct: 175 GTGKSYLAKAVATEANSTFFSVSSSDLVSKWMGESERLVKQLFNMARENKPA 226
Score = 118 (46.6 bits), Expect = 0.00033, P = 0.00033
Identities = 31/86 (36%), Positives = 50/86 (58%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GK+ LA+AVA TF VS S+LV K++GE R+V++LF MAR ++ F +
Sbjct: 176 TGKSYLAKAVATEANSTFFSVSSSDLVSKWMGESERLVKQLFNMAR---ENKPAIIFIDE 232
Query: 72 VDEAIKSSEGFKPYYVTKIEELQLIV 97
VD A+ + G ++ + +L+V
Sbjct: 233 VD-ALCGARGENDSEASRRIKTELLV 257
>TIGR_CMR|GSU_1180 [details] [associations]
symbol:GSU_1180 "cell division protein FtsH"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
RefSeq:NP_952233.1 ProteinModelPortal:Q74DY5 SMR:Q74DY5
GeneID:2686793 KEGG:gsu:GSU1180 PATRIC:22025134 OMA:VCQWGMS
ProtClustDB:CLSK828230 BioCyc:GSUL243231:GH27-1166-MONOMER
Uniprot:Q74DY5
Length = 617
Score = 227 (85.0 bits), Expect = 1.9e-18, Sum P(2) = 1.9e-18
Identities = 46/98 (46%), Positives = 68/98 (69%)
Query: 209 TYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH 268
T++ V G++N E+KE+++ ++ P+ F +G PKGVLL GPPGTGKTLLARAVA
Sbjct: 173 TFDDVAGMENPKMELKEIVDY-LRDPKKFQRIGGKVPKGVLLVGPPGTGKTLLARAVAGE 231
Query: 269 TECTFIRVSGSELVQKFIGEGSRMVRELFVMASLKKLA 306
+ TF+ +S S+ ++ F+G G+ VR+LF A+ KK A
Sbjct: 232 ADVTFLSISASQFIEMFVGVGAGRVRDLF--ATAKKSA 267
Score = 119 (46.9 bits), Expect = 0.00043, P = 0.00043
Identities = 28/70 (40%), Positives = 43/70 (61%)
Query: 12 SGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMARCKGSSRGTEFFTMD 71
+GKTLLARAVA + TF+ +S S+ ++ F+G G+ VR+LF A+ S + F +
Sbjct: 219 TGKTLLARAVAGEADVTFLSISASQFIEMFVGVGAGRVRDLFATAK---KSAPSIIFIDE 275
Query: 72 VDEAIKSSEG 81
+D A+ S G
Sbjct: 276 LD-AVGRSRG 284
Score = 55 (24.4 bits), Expect = 1.9e-18, Sum P(2) = 1.9e-18
Identities = 12/47 (25%), Positives = 24/47 (51%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEA 376
++ APSIIF+ ++T+ +LL+++DGF++
Sbjct: 264 KKSAPSIIFIDELDAVGRSRGAGLGGGHDEREQTLNQLLSEMDGFDS 310
>TAIR|locus:2084163 [details] [associations]
symbol:CDC48C "cell division cycle 48C" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0009793 "embryo development
ending in seed dormancy" evidence=NAS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=RCA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0006396 "RNA processing"
evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0010388 "cullin deneddylation" evidence=RCA] [GO:0016567
"protein ubiquitination" evidence=RCA] [GO:0016571 "histone
methylation" evidence=RCA] [GO:0016579 "protein deubiquitination"
evidence=RCA] [GO:0030422 "production of siRNA involved in RNA
interference" evidence=RCA] [GO:0035196 "production of miRNAs
involved in gene silencing by miRNA" evidence=RCA] [GO:0043687
"post-translational protein modification" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0051301
GO:GO:0005856 GO:GO:0015031 GO:GO:0007049 eggNOG:COG0464
HOGENOM:HOG000223225 GO:GO:0017111 EMBL:AC009325 GO:GO:0009524
EMBL:AY136443 EMBL:BT002135 IPI:IPI00547846 RefSeq:NP_186810.2
UniGene:At.27731 UniGene:At.63552 ProteinModelPortal:Q9SS94
SMR:Q9SS94 IntAct:Q9SS94 PaxDb:Q9SS94 PRIDE:Q9SS94
EnsemblPlants:AT3G01610.1 GeneID:821105 KEGG:ath:AT3G01610
GeneFarm:1903 TAIR:At3g01610 InParanoid:Q9SS94 KO:K14571
OMA:REGFTTI PhylomeDB:Q9SS94 ProtClustDB:CLSN2720022
Genevestigator:Q9SS94 GermOnline:AT3G01610 Uniprot:Q9SS94
Length = 820
Score = 214 (80.4 bits), Expect = 2.0e-18, Sum P(2) = 2.0e-18
Identities = 40/96 (41%), Positives = 59/96 (61%)
Query: 205 VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 264
VPD ++ VGGLD+ + I P+K P+++ A G+ G LLYGPPG GKTL+A+A
Sbjct: 522 VPDVKWDDVGGLDHLRLQFNRYIVRPIKKPDIYKAFGVDLETGFLLYGPPGCGKTLIAKA 581
Query: 265 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
A+ F+ + G+EL+ K++GE +R LF A
Sbjct: 582 AANEAGANFMHIKGAELLNKYVGESELAIRTLFQRA 617
Score = 177 (67.4 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 34/99 (34%), Positives = 55/99 (55%)
Query: 202 VEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLL 261
VE T++ GG+ + E++ + P+ +PE F +G+ P G+L +GPPG GKT L
Sbjct: 224 VEGTKGPTFKDFGGIKKILDELEMNVLFPILNPEPFKKIGVKPPSGILFHGPPGCGKTKL 283
Query: 262 ARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
A A+A+ F ++S +E++ G +RELF A
Sbjct: 284 ANAIANEAGVPFYKISATEVISGVSGASEENIRELFSKA 322
Score = 76 (31.8 bits), Expect = 2.0e-18, Sum P(2) = 2.0e-18
Identities = 16/44 (36%), Positives = 24/44 (54%)
Query: 13 GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
GKT LA A+A+ F ++S +E++ G +RELF A
Sbjct: 279 GKTKLANAIANEAGVPFYKISATEVISGVSGASEENIRELFSKA 322
Score = 39 (18.8 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 9/33 (27%), Positives = 16/33 (48%)
Query: 75 AIKSSEGFKPYYVTKIEELQLIVAEKEQNLRRL 107
AI + G Y ++ E + + E+N+R L
Sbjct: 286 AIANEAGVPFYKISATEVISGVSGASEENIREL 318
>UNIPROTKB|P63345 [details] [associations]
symbol:mpa "Proteasome-associated ATPase" species:1773
"Mycobacterium tuberculosis" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005618 "cell wall" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0009405 "pathogenesis"
evidence=IMP] [GO:0010498 "proteasomal protein catabolic process"
evidence=IDA;IMP] [GO:0010499 "proteasomal ubiquitin-independent
protein catabolic process" evidence=IDA] [GO:0016887 "ATPase
activity" evidence=IDA] [GO:0019941 "modification-dependent protein
catabolic process" evidence=IDA;IMP] [GO:0022623
"proteasome-activating nucleotidase complex" evidence=IDA]
[GO:0032182 "small conjugating protein binding" evidence=IDA;IPI]
[GO:0043335 "protein unfolding" evidence=IDA] [GO:0051260 "protein
homooligomerization" evidence=IPI] [GO:0051409 "response to
nitrosative stress" evidence=IMP] [GO:0070628 "proteasome binding"
evidence=IPI] [GO:0071732 "cellular response to nitric oxide"
evidence=IMP] HAMAP:MF_02112 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR022482 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005886 GO:GO:0005524 GO:GO:0005618
GO:GO:0009405 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0051260 EMBL:BX842578 GO:GO:0016887
GO:GO:0071732 GO:GO:0051409 eggNOG:COG0464 EMBL:DQ888314 PIR:F70512
RefSeq:NP_216631.1 RefSeq:NP_336644.1 RefSeq:YP_006515531.1
PDB:3FP9 PDB:3M91 PDB:3M9B PDB:3M9D PDB:3M9H PDBsum:3FP9
PDBsum:3M91 PDBsum:3M9B PDBsum:3M9D PDBsum:3M9H
ProteinModelPortal:P63345 SMR:P63345 DIP:DIP-48292N
MINT:MINT-7262409 PRIDE:P63345 EnsemblBacteria:EBMYCT00000003259
EnsemblBacteria:EBMYCT00000070852 GeneID:13316922 GeneID:887297
GeneID:923659 KEGG:mtc:MT2175 KEGG:mtu:Rv2115c KEGG:mtv:RVBD_2115c
PATRIC:18126540 TubercuList:Rv2115c HOGENOM:HOG000245286 KO:K13527
OMA:VFFDEME ProtClustDB:CLSK872012 UniPathway:UPA00997
EvolutionaryTrace:P63345 GO:GO:0022623 GO:GO:0032182 GO:GO:0019941
GO:GO:0010499 GO:GO:0043335 PANTHER:PTHR23073:SF4
TIGRFAMs:TIGR03689 Uniprot:P63345
Length = 609
Score = 240 (89.5 bits), Expect = 2.3e-18, P = 2.3e-18
Identities = 55/136 (40%), Positives = 78/136 (57%)
Query: 183 YTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGI 242
Y +I +V+ LV +E+VPD +Y +GGL QI++I++ +ELP H EL+ +
Sbjct: 228 YAFERIPKAEVEDLV----LEEVPDVSYADIGGLSRQIEQIRDAVELPFLHKELYREYSL 283
Query: 243 AQPKGVLLYGPPGTGKTLLARAVA---------------HHTECTFIRVSGSELVQKFIG 287
PKGVLLYGPPG GKTL+A+AVA H + F+ + G EL+ KF+G
Sbjct: 284 RPPKGVLLYGPPGCGKTLIAKAVANSLAKKMAEVRGDDAHEAKSYFLNIKGPELLNKFVG 343
Query: 288 EGSRMVRELFVMASLK 303
E R +R +F A K
Sbjct: 344 ETERHIRLIFQRAREK 359
>UNIPROTKB|E7ERY0 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 EMBL:AC092809 HGNC:HGNC:8070 ChiTaRS:NVL
IPI:IPI00946072 ProteinModelPortal:E7ERY0 SMR:E7ERY0
Ensembl:ENST00000482491 ArrayExpress:E7ERY0 Bgee:E7ERY0
Uniprot:E7ERY0
Length = 580
Score = 224 (83.9 bits), Expect = 3.1e-18, Sum P(3) = 3.1e-18
Identities = 45/96 (46%), Positives = 64/96 (66%)
Query: 205 VPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 264
VP+ T+ +G L++ +E+ I PV++P+ F ALG+ P GVLL GPPG GKTLLA+A
Sbjct: 299 VPNVTWADIGALEDIREELTMAILAPVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKA 358
Query: 265 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 300
VA+ + FI V G EL+ ++GE R VR++F A
Sbjct: 359 VANESGLNFISVKGPELLNMYVGESERAVRQVFQRA 394
Score = 49 (22.3 bits), Expect = 3.1e-18, Sum P(3) = 3.1e-18
Identities = 10/37 (27%), Positives = 19/37 (51%)
Query: 20 AVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMA 56
+ + + ++V+ E+V GE + +RELF A
Sbjct: 41 SASRELDLPILKVAAPEIVSGVSGESEQKLRELFEQA 77
Score = 38 (18.4 bits), Expect = 3.1e-18, Sum P(3) = 3.1e-18
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 362 RTMLELLNQLDGFEA 376
R + +LL ++DG EA
Sbjct: 424 RVVNQLLTEMDGLEA 438
>RGD|621637 [details] [associations]
symbol:Pex6 "peroxisomal biogenesis factor 6" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005777 "peroxisome"
evidence=IEA;ISO] [GO:0005778 "peroxisomal membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IEA;ISO] [GO:0006200 "ATP catabolic
process" evidence=ISO] [GO:0006625 "protein targeting to
peroxisome" evidence=ISO] [GO:0007031 "peroxisome organization"
evidence=ISO;IMP] [GO:0008022 "protein C-terminus binding"
evidence=IEA;ISO] [GO:0016561 "protein import into peroxisome
matrix, translocation" evidence=IEA;ISO] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0032403 "protein complex binding"
evidence=IEA;ISO] [GO:0042623 "ATPase activity, coupled"
evidence=IEA;ISO] [GO:0050821 "protein stabilization"
evidence=IEA;ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621637 GO:GO:0005524 GO:GO:0007031 GO:GO:0005778 eggNOG:COG0464
GO:GO:0017111 HOGENOM:HOG000241031 KO:K13339 CTD:5190
HOVERGEN:HBG002311 OrthoDB:EOG47WNNP EMBL:D63673 EMBL:D89660
IPI:IPI00188277 RefSeq:NP_476466.1 UniGene:Rn.10675
ProteinModelPortal:P54777 STRING:P54777 PRIDE:P54777 GeneID:117265
KEGG:rno:117265 UCSC:RGD:621637 InParanoid:P54777 NextBio:620156
Genevestigator:P54777 GermOnline:ENSRNOG00000016655 Uniprot:P54777
Length = 978
Score = 239 (89.2 bits), Expect = 3.2e-18, Sum P(2) = 3.2e-18
Identities = 51/99 (51%), Positives = 70/99 (70%)
Query: 204 KVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLAR 263
K+P ++ VGGL + KEI E I+LP++HPEL +LG+ + G+LL+GPPGTGKTLLA+
Sbjct: 696 KIPSVSWHDVGGLQDVKKEILETIQLPLEHPELL-SLGLRR-SGLLLHGPPGTGKTLLAK 753
Query: 264 AVAHHTEC--TFIRVSGSELVQKFIGEGSRMVRELFVMA 300
AVA TEC TF+ V G EL+ ++G+ VRE+F A
Sbjct: 754 AVA--TECSLTFLSVKGPELINMYVGQSEENVREVFARA 790
Score = 40 (19.1 bits), Expect = 3.2e-18, Sum P(2) = 3.2e-18
Identities = 13/49 (26%), Positives = 19/49 (38%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEATK 378
R AP IIF + R + +LL +LDG +T+
Sbjct: 791 RAAAPCIIFFDELDSLAPSRGRSGDSGGV-MDRVVSQLLAELDGLHSTQ 838
>UNIPROTKB|P54777 [details] [associations]
symbol:Pex6 "Peroxisome assembly factor 2" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0008022 "protein C-terminus
binding" evidence=IEA] [GO:0016561 "protein import into peroxisome
matrix, translocation" evidence=IEA] [GO:0032403 "protein complex
binding" evidence=IEA] [GO:0042623 "ATPase activity, coupled"
evidence=IEA] [GO:0050821 "protein stabilization" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:621637 GO:GO:0005524
GO:GO:0007031 GO:GO:0005778 eggNOG:COG0464 GO:GO:0017111
HOGENOM:HOG000241031 KO:K13339 CTD:5190 HOVERGEN:HBG002311
OrthoDB:EOG47WNNP EMBL:D63673 EMBL:D89660 IPI:IPI00188277
RefSeq:NP_476466.1 UniGene:Rn.10675 ProteinModelPortal:P54777
STRING:P54777 PRIDE:P54777 GeneID:117265 KEGG:rno:117265
UCSC:RGD:621637 InParanoid:P54777 NextBio:620156
Genevestigator:P54777 GermOnline:ENSRNOG00000016655 Uniprot:P54777
Length = 978
Score = 239 (89.2 bits), Expect = 3.2e-18, Sum P(2) = 3.2e-18
Identities = 51/99 (51%), Positives = 70/99 (70%)
Query: 204 KVPDSTYEMVGGLDNQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLAR 263
K+P ++ VGGL + KEI E I+LP++HPEL +LG+ + G+LL+GPPGTGKTLLA+
Sbjct: 696 KIPSVSWHDVGGLQDVKKEILETIQLPLEHPELL-SLGLRR-SGLLLHGPPGTGKTLLAK 753
Query: 264 AVAHHTEC--TFIRVSGSELVQKFIGEGSRMVRELFVMA 300
AVA TEC TF+ V G EL+ ++G+ VRE+F A
Sbjct: 754 AVA--TECSLTFLSVKGPELINMYVGQSEENVREVFARA 790
Score = 40 (19.1 bits), Expect = 3.2e-18, Sum P(2) = 3.2e-18
Identities = 13/49 (26%), Positives = 19/49 (38%)
Query: 330 REHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEATK 378
R AP IIF + R + +LL +LDG +T+
Sbjct: 791 RAAAPCIIFFDELDSLAPSRGRSGDSGGV-MDRVVSQLLAELDGLHSTQ 838
WARNING: HSPs involving 386 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.137 0.398 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 378 336 0.00092 116 3 11 22 0.36 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 636
No. of states in DFA: 601 (64 KB)
Total size of DFA: 203 KB (2114 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 26.41u 0.08s 26.49t Elapsed: 00:00:14
Total cpu time: 26.45u 0.08s 26.53t Elapsed: 00:00:17
Start: Thu Aug 15 12:14:09 2013 End: Thu Aug 15 12:14:26 2013
WARNINGS ISSUED: 2