Query psy6102
Match_columns 426
No_of_seqs 346 out of 3396
Neff 7.8
Searched_HMMs 29240
Date Fri Aug 16 17:39:48 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6102.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/6102hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ihg_A Cyclophilin 40; ppiase 100.0 2.4E-62 8.3E-67 492.7 31.4 314 10-423 15-370 (370)
2 2igv_A Peptidyl-prolyl CIS-tra 100.0 2E-45 6.9E-50 329.4 15.3 166 9-274 2-167 (173)
3 1a58_A Cyclophilin; isomerase, 100.0 1.9E-45 6.7E-50 330.7 15.0 169 6-274 2-172 (177)
4 2wfi_A Peptidyl-prolyl CIS-tra 100.0 3.8E-45 1.3E-49 329.2 15.3 168 7-274 6-175 (179)
5 2poy_A Peptidyl-prolyl CIS-tra 100.0 6.6E-45 2.2E-49 328.8 15.0 170 5-274 14-183 (186)
6 2he9_A NK-tumor recognition pr 100.0 6.8E-45 2.3E-49 330.3 15.1 170 5-274 14-185 (192)
7 1qng_A Peptidyl-prolyl CIS-tra 100.0 1.6E-44 5.4E-49 322.7 14.0 165 9-274 2-166 (170)
8 2cmt_A Peptidyl-prolyl CIS-tra 100.0 3.3E-44 1.1E-48 320.8 14.4 166 1-274 1-167 (172)
9 1mzw_A Cyclophilin H, U-snRNP- 100.0 3E-44 1E-48 322.7 14.1 170 3-274 3-173 (177)
10 2z6w_A Peptidyl-prolyl CIS-tra 100.0 9.1E-44 3.1E-48 316.3 14.2 158 9-274 2-160 (165)
11 2r99_A Peptidyl-prolyl CIS-tra 100.0 2.3E-43 7.8E-48 315.9 14.3 160 7-274 8-168 (173)
12 1z81_A Cyclophilin; structural 100.0 4.7E-43 1.6E-47 325.0 14.7 167 6-274 55-225 (229)
13 3pmp_A Cyclophilin A; peptidyl 100.0 6.2E-43 2.1E-47 311.0 14.6 158 9-274 1-159 (164)
14 2haq_A Cyclophilin; rotamase, 100.0 7E-43 2.4E-47 311.7 14.2 160 6-274 7-168 (172)
15 3rdd_A Peptidyl-prolyl CIS-tra 100.0 2.8E-42 9.5E-47 311.6 14.8 161 7-274 19-179 (184)
16 3ich_A Peptidyl-prolyl CIS-tra 100.0 1.8E-42 6.1E-47 313.6 13.5 160 7-274 12-173 (188)
17 3k2c_A Peptidyl-prolyl CIS-tra 100.0 3.9E-42 1.3E-46 312.7 15.0 164 3-274 20-186 (193)
18 4fru_A Cyclophilin B, peptidyl 100.0 8E-42 2.7E-46 309.5 14.1 161 7-274 9-170 (185)
19 2c3b_A Ppiase, cyclophilin; is 100.0 3.2E-41 1.1E-45 301.7 7.8 155 12-274 4-168 (172)
20 2ose_A Probable peptidyl-proly 100.0 1.9E-40 6.5E-45 309.8 13.2 168 5-274 9-202 (234)
21 2fu0_A Cyclophilin, putative; 100.0 2.2E-39 7.4E-44 286.5 11.9 148 10-273 5-154 (160)
22 2x7k_A Peptidyl-prolyl CIS-tra 100.0 2.1E-39 7.3E-44 288.2 11.8 150 8-273 9-160 (166)
23 1w74_A Peptidyl-prolyl CIS-tra 100.0 4.3E-39 1.5E-43 291.6 12.4 158 7-273 20-186 (191)
24 2a2n_A Peptidylprolyl isomeras 100.0 5.6E-39 1.9E-43 287.8 12.5 148 10-273 21-171 (176)
25 2ok3_A Peptidyl-prolyl CIS-tra 100.0 1.7E-38 5.7E-43 281.4 11.8 146 12-273 2-150 (161)
26 2b71_A Cyclophilin-like protei 100.0 1.1E-38 3.8E-43 289.8 10.8 151 8-274 36-188 (196)
27 1zkc_A Peptidyl-prolyl CIS-tra 100.0 2E-38 7E-43 288.0 10.9 151 8-274 17-170 (197)
28 2poe_A Cyclophilin-like protei 100.0 3.6E-38 1.2E-42 284.7 11.3 154 9-274 15-170 (185)
29 2k7n_A Peptidyl-prolyl CIS-tra 100.0 3.4E-38 1.2E-42 287.6 10.3 151 8-274 9-161 (203)
30 1v9t_A Cyclophilin B; beta bar 100.0 7.6E-38 2.6E-42 278.8 10.5 154 8-273 2-160 (166)
31 3bo7_A Peptidyl-prolyl CIS-tra 100.0 1E-37 3.5E-42 285.8 10.6 151 8-274 4-168 (201)
32 2hq6_A Serologically defined c 100.0 1.8E-37 6.1E-42 279.9 11.5 152 6-274 20-175 (185)
33 3bkp_A Cyclophilin; malaria, i 100.0 1.3E-36 4.3E-41 283.3 12.0 159 6-274 17-188 (232)
34 1lop_A Cyclophilin A; rotamase 100.0 5.2E-37 1.8E-41 272.9 8.0 152 13-273 2-158 (164)
35 3s6m_A Peptidyl-prolyl CIS-tra 100.0 2.3E-36 7.9E-41 269.7 10.1 156 9-273 2-162 (167)
36 3rfy_A Peptidyl-prolyl CIS-tra 100.0 4.8E-33 1.6E-37 273.5 6.7 152 5-259 165-345 (369)
37 3rkv_A Putative peptidylprolyl 99.9 1.5E-21 5E-26 171.0 12.4 155 270-424 5-162 (162)
38 4gco_A Protein STI-1; structur 99.8 1.3E-20 4.5E-25 159.4 14.8 116 273-404 10-125 (126)
39 2hr2_A Hypothetical protein; a 99.8 4.2E-19 1.4E-23 156.2 9.7 138 272-413 7-155 (159)
40 1p5q_A FKBP52, FK506-binding p 99.8 9.9E-18 3.4E-22 165.2 18.4 152 272-424 143-294 (336)
41 1kt0_A FKBP51, 51 kDa FK506-bi 99.8 7.1E-18 2.4E-22 173.3 16.0 152 272-424 264-415 (457)
42 2fbn_A 70 kDa peptidylprolyl i 99.8 1.4E-17 4.6E-22 150.4 15.2 156 270-425 32-187 (198)
43 3upv_A Heat shock protein STI1 99.7 2.4E-17 8.3E-22 137.4 15.0 117 275-407 3-125 (126)
44 4gcn_A Protein STI-1; structur 99.7 1.6E-17 5.5E-22 140.3 13.3 114 273-403 5-125 (127)
45 3gyz_A Chaperone protein IPGC; 99.7 1.5E-16 5.3E-21 139.1 16.6 106 273-394 33-138 (151)
46 4ga2_A E3 SUMO-protein ligase 99.7 3.8E-17 1.3E-21 141.9 12.5 118 275-408 30-148 (150)
47 3sz7_A HSC70 cochaperone (SGT) 99.7 1E-16 3.5E-21 140.2 14.9 124 272-411 7-132 (164)
48 4ga2_A E3 SUMO-protein ligase 99.7 5.9E-17 2E-21 140.7 10.8 124 281-420 2-125 (150)
49 2xcb_A PCRH, regulatory protei 99.7 4.2E-16 1.4E-20 133.4 14.5 122 274-411 16-137 (142)
50 2vgx_A Chaperone SYCD; alterna 99.7 4E-16 1.4E-20 135.3 13.7 119 274-408 19-137 (148)
51 2if4_A ATFKBP42; FKBP-like, al 99.7 6.4E-17 2.2E-21 159.6 9.3 156 269-424 172-328 (338)
52 3urz_A Uncharacterized protein 99.7 1.9E-15 6.6E-20 138.0 17.6 121 275-411 3-139 (208)
53 4gyw_A UDP-N-acetylglucosamine 99.7 1.1E-15 3.8E-20 165.5 18.3 125 274-414 7-131 (723)
54 3q49_B STIP1 homology and U bo 99.7 6.9E-16 2.4E-20 129.5 13.1 123 275-413 8-135 (137)
55 2pl2_A Hypothetical conserved 99.6 1.5E-15 5E-20 139.7 13.6 126 273-415 36-172 (217)
56 2vyi_A SGTA protein; chaperone 99.6 1E-14 3.4E-19 119.8 16.8 124 271-410 7-130 (131)
57 1a17_A Serine/threonine protei 99.6 1.6E-14 5.5E-19 124.4 17.8 128 272-415 9-138 (166)
58 2lni_A Stress-induced-phosphop 99.6 3.6E-15 1.2E-19 123.4 12.9 120 273-408 13-132 (133)
59 1elw_A TPR1-domain of HOP; HOP 99.6 1.2E-14 4E-19 117.3 15.6 115 275-405 3-117 (118)
60 3vtx_A MAMA; tetratricopeptide 99.6 1.6E-14 5.5E-19 127.7 17.8 146 275-421 4-167 (184)
61 4gyw_A UDP-N-acetylglucosamine 99.6 5.8E-15 2E-19 159.9 16.6 125 275-415 42-166 (723)
62 4i17_A Hypothetical protein; T 99.6 1.8E-14 6.1E-19 132.1 17.5 129 276-421 7-143 (228)
63 2pl2_A Hypothetical conserved 99.6 1.4E-14 4.8E-19 133.1 16.6 109 297-415 98-206 (217)
64 2h6f_A Protein farnesyltransfe 99.6 6.6E-15 2.2E-19 148.0 14.5 116 276-407 131-247 (382)
65 2dba_A Smooth muscle cell asso 99.6 1.9E-14 6.5E-19 121.5 14.3 117 273-405 25-144 (148)
66 1hxi_A PEX5, peroxisome target 99.6 5.5E-15 1.9E-19 123.6 10.5 102 278-395 19-120 (121)
67 1elr_A TPR2A-domain of HOP; HO 99.6 2.6E-14 8.8E-19 117.5 13.7 119 275-410 3-128 (131)
68 3vtx_A MAMA; tetratricopeptide 99.6 8.9E-14 3E-18 122.9 17.6 77 319-395 100-176 (184)
69 2xev_A YBGF; tetratricopeptide 99.6 3E-14 1E-18 118.1 13.7 115 278-408 4-124 (129)
70 2h6f_A Protein farnesyltransfe 99.6 1E-14 3.5E-19 146.5 12.8 126 274-415 95-221 (382)
71 3gyz_A Chaperone protein IPGC; 99.6 8.4E-15 2.9E-19 128.0 9.7 102 315-416 25-126 (151)
72 1na0_A Designed protein CTPR3; 99.6 1.6E-13 5.4E-18 111.5 16.3 117 275-407 8-124 (125)
73 4gco_A Protein STI-1; structur 99.5 1.1E-13 3.9E-18 116.5 14.6 97 320-416 7-103 (126)
74 1zu2_A Mitochondrial import re 99.5 5E-14 1.7E-18 123.6 12.7 107 285-407 11-138 (158)
75 4i17_A Hypothetical protein; T 99.5 1.4E-13 4.9E-18 126.0 16.3 118 277-410 43-169 (228)
76 1wao_1 Serine/threonine protei 99.5 3.8E-14 1.3E-18 146.4 11.8 126 274-415 4-131 (477)
77 2fo7_A Synthetic consensus TPR 99.5 6.6E-13 2.3E-17 108.8 16.4 124 277-416 2-125 (136)
78 1hh8_A P67PHOX, NCF-2, neutrop 99.5 3.3E-13 1.1E-17 121.7 15.5 124 274-416 4-143 (213)
79 2c2l_A CHIP, carboxy terminus 99.5 8.6E-14 3E-18 133.3 10.7 103 275-393 3-105 (281)
80 3k9i_A BH0479 protein; putativ 99.5 1E-13 3.5E-18 114.4 9.6 105 288-405 2-106 (117)
81 3as5_A MAMA; tetratricopeptide 99.5 1.4E-12 4.8E-17 113.2 17.3 124 276-415 42-165 (186)
82 4abn_A Tetratricopeptide repea 99.5 4.8E-13 1.7E-17 137.7 16.6 124 276-415 170-313 (474)
83 3urz_A Uncharacterized protein 99.5 4.1E-13 1.4E-17 122.4 14.2 109 278-403 56-199 (208)
84 3uq3_A Heat shock protein STI1 99.5 1.2E-12 4E-17 120.3 17.0 141 275-415 78-228 (258)
85 2kck_A TPR repeat; tetratricop 99.5 2.2E-13 7.7E-18 108.8 10.0 102 276-393 6-110 (112)
86 2vgx_A Chaperone SYCD; alterna 99.5 2.5E-13 8.6E-18 117.5 11.0 94 322-415 17-110 (148)
87 2e2e_A Formate-dependent nitri 99.5 6.5E-13 2.2E-17 116.8 13.5 120 280-415 14-136 (177)
88 1xnf_A Lipoprotein NLPI; TPR, 99.5 2.7E-12 9.1E-17 119.5 18.2 125 274-415 41-165 (275)
89 3qky_A Outer membrane assembly 99.4 7.7E-13 2.6E-17 124.0 14.0 130 275-421 14-174 (261)
90 2vsy_A XCC0866; transferase, g 99.4 1.4E-12 4.9E-17 136.5 17.4 126 275-416 22-150 (568)
91 2e2e_A Formate-dependent nitri 99.4 1E-12 3.6E-17 115.5 13.8 115 275-405 43-160 (177)
92 2q7f_A YRRB protein; TPR, prot 99.4 4.4E-12 1.5E-16 115.7 18.5 124 276-415 91-214 (243)
93 3as5_A MAMA; tetratricopeptide 99.4 1.8E-12 6E-17 112.6 14.5 126 275-416 7-132 (186)
94 3qky_A Outer membrane assembly 99.4 2.8E-12 9.7E-17 120.1 16.8 133 275-421 51-221 (261)
95 3ieg_A DNAJ homolog subfamily 99.4 4.2E-12 1.4E-16 122.1 18.3 120 276-411 234-357 (359)
96 2pzi_A Probable serine/threoni 99.4 3.6E-13 1.2E-17 144.9 11.9 129 275-421 432-560 (681)
97 4eqf_A PEX5-related protein; a 99.4 2.1E-12 7.3E-17 126.2 16.5 124 276-415 177-302 (365)
98 2q7f_A YRRB protein; TPR, prot 99.4 3.6E-12 1.2E-16 116.4 16.7 124 276-415 57-180 (243)
99 4abn_A Tetratricopeptide repea 99.4 1.2E-12 4E-17 134.9 14.7 124 275-415 101-242 (474)
100 1fch_A Peroxisomal targeting s 99.4 1.3E-12 4.5E-17 127.1 14.2 125 275-415 216-351 (368)
101 3uq3_A Heat shock protein STI1 99.4 2E-12 6.9E-17 118.7 14.4 114 274-403 137-256 (258)
102 2vq2_A PILW, putative fimbrial 99.4 6.3E-12 2.1E-16 112.9 17.3 124 276-415 42-168 (225)
103 4eqf_A PEX5-related protein; a 99.4 2.2E-12 7.5E-17 126.1 14.9 125 275-415 212-348 (365)
104 2vq2_A PILW, putative fimbrial 99.4 6.7E-12 2.3E-16 112.8 16.6 125 275-415 75-203 (225)
105 2xcb_A PCRH, regulatory protei 99.4 1.6E-12 5.4E-17 110.9 11.5 96 320-415 12-107 (142)
106 3ieg_A DNAJ homolog subfamily 99.4 5.1E-12 1.8E-16 121.4 16.3 125 275-415 2-141 (359)
107 2ho1_A Type 4 fimbrial biogene 99.4 9.5E-12 3.2E-16 114.7 16.9 140 276-415 71-230 (252)
108 2yhc_A BAMD, UPF0169 lipoprote 99.4 5.1E-12 1.7E-16 116.3 14.9 132 275-423 40-212 (225)
109 1w3b_A UDP-N-acetylglucosamine 99.4 3.7E-12 1.3E-16 125.7 14.9 141 275-415 66-224 (388)
110 3u4t_A TPR repeat-containing p 99.4 1.5E-12 5.2E-17 121.3 11.5 120 278-414 5-128 (272)
111 2ho1_A Type 4 fimbrial biogene 99.4 5.9E-12 2E-16 116.1 15.2 140 275-414 36-195 (252)
112 3cv0_A Peroxisome targeting si 99.4 6.6E-12 2.3E-16 119.4 16.0 125 275-415 171-307 (327)
113 2yhc_A BAMD, UPF0169 lipoprote 99.4 3.4E-12 1.1E-16 117.5 13.4 127 276-415 4-168 (225)
114 1w3b_A UDP-N-acetylglucosamine 99.4 6.7E-12 2.3E-16 123.8 16.3 147 275-422 168-332 (388)
115 1hh8_A P67PHOX, NCF-2, neutrop 99.4 4.6E-12 1.6E-16 114.1 13.8 104 276-395 37-156 (213)
116 3qou_A Protein YBBN; thioredox 99.4 4.5E-12 1.5E-16 121.6 14.5 125 275-415 116-276 (287)
117 3upv_A Heat shock protein STI1 99.4 9.1E-12 3.1E-16 103.2 14.4 94 323-416 1-94 (126)
118 2r5s_A Uncharacterized protein 99.4 2.7E-12 9.1E-17 113.4 11.3 122 278-415 8-165 (176)
119 2kat_A Uncharacterized protein 99.4 1.1E-11 3.9E-16 101.2 13.5 103 294-412 3-107 (115)
120 2pzi_A Probable serine/threoni 99.4 6E-13 2E-17 143.3 7.3 117 275-408 466-582 (681)
121 2y4t_A DNAJ homolog subfamily 99.3 1.7E-11 5.7E-16 122.8 17.2 126 274-415 24-164 (450)
122 3hym_B Cell division cycle pro 99.3 8.7E-12 3E-16 118.8 14.4 125 275-415 89-214 (330)
123 3u4t_A TPR repeat-containing p 99.3 5.3E-12 1.8E-16 117.6 12.4 119 275-409 73-191 (272)
124 2l6j_A TPR repeat-containing p 99.3 5.8E-13 2E-17 107.1 4.9 95 275-385 3-103 (111)
125 1qqe_A Vesicular transport pro 99.3 9.2E-12 3.2E-16 119.4 14.2 132 274-415 75-220 (292)
126 3edt_B KLC 2, kinesin light ch 99.3 8.9E-12 3E-16 115.6 13.6 134 274-415 41-190 (283)
127 1xnf_A Lipoprotein NLPI; TPR, 99.3 1.7E-11 5.8E-16 114.0 15.3 124 280-415 9-132 (275)
128 3mkr_A Coatomer subunit epsilo 99.3 2.1E-11 7.2E-16 117.3 16.2 124 275-414 129-254 (291)
129 2y4t_A DNAJ homolog subfamily 99.3 1.4E-11 4.7E-16 123.4 15.4 117 277-409 258-378 (450)
130 3hym_B Cell division cycle pro 99.3 1.5E-11 5.3E-16 117.0 14.9 96 320-415 187-291 (330)
131 4gcn_A Protein STI-1; structur 99.3 1.1E-11 3.9E-16 104.0 12.3 93 323-415 5-104 (127)
132 1fch_A Peroxisomal targeting s 99.3 2.8E-11 9.7E-16 117.6 16.9 118 281-415 187-306 (368)
133 1hxi_A PEX5, peroxisome target 99.3 3.5E-11 1.2E-15 100.2 14.4 95 327-422 18-112 (121)
134 3sz7_A HSC70 cochaperone (SGT) 99.3 3.1E-11 1.1E-15 105.0 14.1 95 322-416 7-101 (164)
135 2gw1_A Mitochondrial precursor 99.3 5E-11 1.7E-15 120.9 16.7 104 273-393 3-106 (514)
136 3cv0_A Peroxisome targeting si 99.3 8.9E-11 3E-15 111.5 17.2 117 283-415 144-261 (327)
137 3q49_B STIP1 homology and U bo 99.3 9.1E-11 3.1E-15 97.9 14.6 94 322-415 5-98 (137)
138 3fp2_A TPR repeat-containing p 99.3 5E-11 1.7E-15 122.0 15.6 122 278-415 278-399 (537)
139 1qqe_A Vesicular transport pro 99.3 2.9E-11 9.9E-16 115.9 12.9 132 274-415 35-179 (292)
140 3mkr_A Coatomer subunit epsilo 99.3 1.7E-10 5.8E-15 111.0 18.4 98 286-399 176-274 (291)
141 2fo7_A Synthetic consensus TPR 99.3 5.9E-11 2E-15 96.9 13.0 102 276-393 35-136 (136)
142 1na3_A Designed protein CTPR2; 99.3 7.2E-11 2.4E-15 91.2 12.7 85 323-407 6-90 (91)
143 2vsy_A XCC0866; transferase, g 99.3 3.6E-11 1.2E-15 125.8 14.4 112 289-416 2-113 (568)
144 2hr2_A Hypothetical protein; a 99.3 5.7E-11 2E-15 104.2 13.0 91 325-415 10-123 (159)
145 1p5q_A FKBP52, FK506-binding p 99.3 6.8E-12 2.3E-16 123.3 7.9 113 288-416 125-252 (336)
146 4g1t_A Interferon-induced prot 99.2 8.1E-11 2.8E-15 118.8 15.5 126 276-408 51-186 (472)
147 3edt_B KLC 2, kinesin light ch 99.2 4.2E-11 1.4E-15 111.0 12.3 141 274-423 83-280 (283)
148 3fp2_A TPR repeat-containing p 99.2 1.1E-10 3.7E-15 119.4 16.0 134 266-416 233-366 (537)
149 3ro3_A PINS homolog, G-protein 99.2 1E-10 3.4E-15 98.8 13.2 133 274-416 7-151 (164)
150 2kck_A TPR repeat; tetratricop 99.2 4.2E-11 1.5E-15 95.3 10.1 95 322-416 2-99 (112)
151 2l6j_A TPR repeat-containing p 99.2 8.9E-11 3E-15 94.1 12.0 87 325-411 3-95 (111)
152 2xpi_A Anaphase-promoting comp 99.2 1.2E-10 4.2E-15 120.9 16.3 130 275-421 372-501 (597)
153 3ma5_A Tetratricopeptide repea 99.2 9.6E-11 3.3E-15 94.0 11.1 87 322-408 3-91 (100)
154 3ulq_A Response regulator aspa 99.2 1.7E-10 5.8E-15 114.1 13.7 133 274-415 141-285 (383)
155 2xpi_A Anaphase-promoting comp 99.2 4.7E-10 1.6E-14 116.6 17.2 146 275-421 406-576 (597)
156 1kt0_A FKBP51, 51 kDa FK506-bi 99.2 2.6E-11 9E-16 124.2 7.2 113 288-416 246-373 (457)
157 2lni_A Stress-induced-phosphop 99.2 3.9E-10 1.3E-14 92.6 13.0 95 322-416 12-106 (133)
158 1na3_A Designed protein CTPR2; 99.2 2.6E-10 8.7E-15 88.0 11.0 84 275-374 8-91 (91)
159 2ond_A Cleavage stimulation fa 99.2 2.3E-10 7.9E-15 110.2 13.1 123 275-413 98-222 (308)
160 2gw1_A Mitochondrial precursor 99.2 2E-10 6.9E-15 116.4 13.3 123 277-415 339-470 (514)
161 2kc7_A BFR218_protein; tetratr 99.2 3.5E-11 1.2E-15 95.2 6.0 89 281-393 5-94 (99)
162 3nf1_A KLC 1, kinesin light ch 99.2 2.5E-10 8.4E-15 107.7 12.9 134 274-415 67-216 (311)
163 2ifu_A Gamma-SNAP; membrane fu 99.1 1.4E-10 4.7E-15 112.0 11.2 107 276-394 116-228 (307)
164 3nf1_A KLC 1, kinesin light ch 99.1 3.3E-10 1.1E-14 106.7 13.5 135 274-416 109-300 (311)
165 3rkv_A Putative peptidylprolyl 99.1 2.6E-10 9E-15 98.8 11.6 93 324-416 9-119 (162)
166 1dce_A Protein (RAB geranylger 99.1 5E-10 1.7E-14 118.0 15.9 117 275-407 62-191 (567)
167 1elw_A TPR1-domain of HOP; HOP 99.1 1.2E-09 4.2E-14 87.3 14.7 92 325-416 3-94 (118)
168 3gw4_A Uncharacterized protein 99.1 3E-10 1E-14 100.8 11.3 131 275-415 25-168 (203)
169 2qfc_A PLCR protein; TPR, HTH, 99.1 5.5E-10 1.9E-14 106.6 13.9 134 275-418 114-260 (293)
170 2fbn_A 70 kDa peptidylprolyl i 99.1 1.8E-10 6.1E-15 103.4 9.7 95 322-416 34-144 (198)
171 2vyi_A SGTA protein; chaperone 99.1 1.2E-09 4.1E-14 88.9 13.9 95 322-416 8-102 (131)
172 3q15_A PSP28, response regulat 99.1 8.6E-10 2.9E-14 109.0 15.3 108 274-391 180-292 (378)
173 3ulq_A Response regulator aspa 99.1 7.6E-10 2.6E-14 109.4 14.7 107 274-390 182-294 (383)
174 3q15_A PSP28, response regulat 99.1 7E-10 2.4E-14 109.7 14.3 134 273-415 138-282 (378)
175 4a1s_A PINS, partner of inscut 99.1 5.1E-10 1.8E-14 110.7 13.2 121 273-409 45-181 (411)
176 2dba_A Smooth muscle cell asso 99.1 1.3E-09 4.3E-14 91.5 13.7 96 321-416 23-121 (148)
177 1ouv_A Conserved hypothetical 99.1 2.3E-09 7.9E-14 100.5 15.9 87 325-415 73-171 (273)
178 3sf4_A G-protein-signaling mod 99.1 9.2E-10 3.1E-14 107.8 13.3 131 275-415 186-328 (406)
179 1na0_A Designed protein CTPR3; 99.1 3.6E-09 1.2E-13 85.3 14.7 94 322-415 4-98 (125)
180 3u3w_A Transcriptional activat 99.1 3.8E-10 1.3E-14 107.8 10.2 130 276-415 115-258 (293)
181 3sf4_A G-protein-signaling mod 99.1 1.2E-09 3.9E-14 107.1 13.9 132 275-416 126-289 (406)
182 4a1s_A PINS, partner of inscut 99.1 9.1E-10 3.1E-14 108.8 13.1 132 274-415 164-324 (411)
183 2xev_A YBGF; tetratricopeptide 99.1 2.5E-09 8.5E-14 88.0 13.7 89 327-415 3-97 (129)
184 3dra_A Protein farnesyltransfe 99.1 2.3E-09 7.9E-14 104.2 15.4 119 275-409 66-195 (306)
185 2c2l_A CHIP, carboxy terminus 99.0 1.6E-09 5.3E-14 103.5 13.6 94 323-416 1-94 (281)
186 2ond_A Cleavage stimulation fa 99.0 8.3E-10 2.8E-14 106.3 11.8 112 292-420 80-194 (308)
187 3u3w_A Transcriptional activat 99.0 6E-10 2.1E-14 106.4 10.6 108 274-390 153-267 (293)
188 3ro2_A PINS homolog, G-protein 99.0 1.1E-09 3.7E-14 103.5 12.2 119 275-409 4-138 (338)
189 2ifu_A Gamma-SNAP; membrane fu 99.0 7.2E-10 2.5E-14 106.9 11.2 130 276-417 76-218 (307)
190 1a17_A Serine/threonine protei 99.0 4E-09 1.4E-13 90.1 14.8 92 324-415 11-102 (166)
191 3dss_A Geranylgeranyl transfer 99.0 7.8E-09 2.7E-13 101.5 18.4 117 275-407 63-192 (331)
192 3dra_A Protein farnesyltransfe 99.0 8.3E-10 2.9E-14 107.4 11.4 132 275-422 102-248 (306)
193 2kc7_A BFR218_protein; tetratr 99.0 1.6E-09 5.4E-14 85.5 11.0 77 329-405 3-82 (99)
194 1pc2_A Mitochondria fission pr 99.0 1.8E-09 6E-14 93.7 12.0 107 287-409 9-120 (152)
195 3ro2_A PINS homolog, G-protein 99.0 1.7E-09 5.8E-14 102.2 12.8 132 274-415 181-324 (338)
196 1elr_A TPR2A-domain of HOP; HO 99.0 2.2E-09 7.6E-14 87.4 11.9 92 324-415 2-100 (131)
197 1ouv_A Conserved hypothetical 99.0 6.2E-09 2.1E-13 97.5 16.3 120 279-421 77-212 (273)
198 4g1t_A Interferon-induced prot 99.0 3.4E-09 1.2E-13 106.8 14.6 165 243-411 107-298 (472)
199 3n71_A Histone lysine methyltr 99.0 3.7E-09 1.2E-13 109.4 14.2 136 272-415 305-456 (490)
200 3ro3_A PINS homolog, G-protein 99.0 2.9E-09 9.8E-14 89.7 10.3 108 275-392 48-161 (164)
201 2qfc_A PLCR protein; TPR, HTH, 98.9 2.1E-08 7.4E-13 95.5 17.1 131 275-415 74-217 (293)
202 1dce_A Protein (RAB geranylger 98.9 1.1E-08 3.7E-13 107.8 16.1 106 292-413 45-163 (567)
203 3rjv_A Putative SEL1 repeat pr 98.9 3.3E-09 1.1E-13 96.7 10.4 130 275-407 17-175 (212)
204 2r5s_A Uncharacterized protein 98.9 1.4E-09 4.7E-14 95.8 7.5 114 275-388 39-172 (176)
205 3rjv_A Putative SEL1 repeat pr 98.9 4.2E-09 1.4E-13 96.0 10.8 107 279-404 88-210 (212)
206 2if4_A ATFKBP42; FKBP-like, al 98.9 5.5E-10 1.9E-14 109.8 5.1 103 277-395 231-334 (338)
207 1wao_1 Serine/threonine protei 98.9 5E-10 1.7E-14 115.4 4.4 103 275-393 39-154 (477)
208 3dss_A Geranylgeranyl transfer 98.9 2.1E-08 7.1E-13 98.4 15.2 119 273-407 105-240 (331)
209 3q7a_A Farnesyltransferase alp 98.9 2.3E-08 7.8E-13 98.7 15.2 114 282-411 60-176 (349)
210 3k9i_A BH0479 protein; putativ 98.9 6.4E-09 2.2E-13 85.2 9.4 85 274-374 25-109 (117)
211 3q7a_A Farnesyltransferase alp 98.9 9.5E-09 3.3E-13 101.4 12.3 119 275-409 87-216 (349)
212 2v5f_A Prolyl 4-hydroxylase su 98.8 2.4E-08 8.2E-13 80.8 11.4 85 324-408 3-94 (104)
213 1ihg_A Cyclophilin 40; ppiase 98.8 1.6E-08 5.6E-13 100.7 11.6 92 325-416 222-329 (370)
214 3bee_A Putative YFRE protein; 98.8 3.2E-08 1.1E-12 78.8 10.5 75 322-396 2-79 (93)
215 4f3v_A ESX-1 secretion system 98.8 1E-08 3.6E-13 98.2 9.0 124 275-415 101-229 (282)
216 4f3v_A ESX-1 secretion system 98.8 1.7E-08 6E-13 96.6 10.4 109 278-402 137-249 (282)
217 2ooe_A Cleavage stimulation fa 98.8 3.4E-08 1.2E-12 102.1 13.2 132 274-422 319-452 (530)
218 3gw4_A Uncharacterized protein 98.8 4E-08 1.4E-12 86.9 11.7 115 286-416 2-129 (203)
219 1zu2_A Mitochondrial import re 98.8 2.1E-08 7.2E-13 87.7 9.5 72 337-408 13-94 (158)
220 3ma5_A Tetratricopeptide repea 98.8 1.8E-08 6E-13 80.5 7.7 83 274-372 5-89 (100)
221 1hz4_A MALT regulatory protein 98.8 9.6E-08 3.3E-12 93.4 14.6 131 275-415 52-195 (373)
222 3qou_A Protein YBBN; thioredox 98.7 8.3E-08 2.8E-12 91.6 13.2 97 322-418 113-243 (287)
223 2v5f_A Prolyl 4-hydroxylase su 98.7 9.1E-08 3.1E-12 77.3 10.8 85 275-368 4-88 (104)
224 3qww_A SET and MYND domain-con 98.7 1.2E-07 4.1E-12 96.5 13.4 120 276-403 298-430 (433)
225 2kat_A Uncharacterized protein 98.6 2.4E-07 8E-12 75.1 11.4 72 344-415 3-74 (115)
226 2ooe_A Cleavage stimulation fa 98.6 1.3E-07 4.4E-12 97.8 11.8 129 275-420 271-416 (530)
227 3qwp_A SET and MYND domain-con 98.6 1E-07 3.4E-12 97.0 10.4 117 276-400 287-416 (429)
228 1klx_A Cysteine rich protein B 98.6 3.7E-07 1.2E-11 77.6 12.2 98 282-401 31-136 (138)
229 1nzn_A CGI-135 protein, fissio 98.6 6.4E-07 2.2E-11 75.0 11.7 104 290-409 15-123 (126)
230 1hz4_A MALT regulatory protein 98.5 3.7E-07 1.2E-11 89.2 11.5 131 275-416 13-157 (373)
231 2xm6_A Protein corresponding t 98.5 8E-07 2.7E-11 90.8 14.0 81 324-406 361-452 (490)
232 1klx_A Cysteine rich protein B 98.5 1.5E-06 5.1E-11 73.7 12.9 103 289-415 8-118 (138)
233 2xm6_A Protein corresponding t 98.5 2.2E-06 7.4E-11 87.6 16.4 78 325-406 146-231 (490)
234 4b4t_Q 26S proteasome regulato 98.4 8.3E-07 2.8E-11 88.2 11.2 132 277-418 96-240 (434)
235 3e4b_A ALGK; tetratricopeptide 98.4 1.3E-06 4.4E-11 89.0 12.4 120 278-406 178-330 (452)
236 3ly7_A Transcriptional activat 98.3 4.7E-06 1.6E-10 82.4 13.6 119 275-394 195-344 (372)
237 4b4t_Q 26S proteasome regulato 98.3 2.2E-06 7.6E-11 85.0 10.6 132 274-415 53-196 (434)
238 3mv2_B Coatomer subunit epsilo 98.2 1.1E-05 3.7E-10 78.2 13.3 124 277-417 101-234 (310)
239 3u64_A Protein TP_0956; tetrat 98.2 8.9E-06 3.1E-10 77.6 12.4 91 286-392 173-272 (301)
240 3n71_A Histone lysine methyltr 98.2 2.1E-06 7.3E-11 88.6 8.7 116 274-397 349-472 (490)
241 3u64_A Protein TP_0956; tetrat 98.2 2.3E-05 7.9E-10 74.8 15.0 149 269-417 66-263 (301)
242 3mv2_B Coatomer subunit epsilo 98.1 1.2E-05 4E-10 77.9 11.3 102 278-400 178-293 (310)
243 3o48_A Mitochondria fission 1 98.1 5.4E-05 1.8E-09 63.6 12.5 89 322-410 36-128 (134)
244 3e4b_A ALGK; tetratricopeptide 98.0 1.7E-05 5.8E-10 80.6 10.8 109 277-403 142-257 (452)
245 1pc2_A Mitochondria fission pr 98.0 2.3E-05 7.8E-10 67.8 9.9 79 275-369 31-114 (152)
246 1y8m_A FIS1; mitochondria, unk 98.0 6.2E-05 2.1E-09 64.0 12.0 86 323-408 36-125 (144)
247 1xi4_A Clathrin heavy chain; a 98.0 3.7E-05 1.3E-09 87.0 13.2 126 280-411 1053-1184(1630)
248 3bee_A Putative YFRE protein; 98.0 1.6E-05 5.4E-10 63.0 7.0 69 275-359 5-76 (93)
249 1b89_A Protein (clathrin heavy 97.9 2E-05 7E-10 79.8 8.4 104 278-407 124-254 (449)
250 3ly7_A Transcriptional activat 97.9 0.00013 4.4E-09 72.1 13.3 45 316-361 301-345 (372)
251 1xi4_A Clathrin heavy chain; a 97.9 7.4E-05 2.5E-09 84.6 12.8 108 277-408 1196-1328(1630)
252 1b89_A Protein (clathrin heavy 97.8 2.2E-05 7.7E-10 79.5 6.8 128 275-415 60-198 (449)
253 3ffl_A Anaphase-promoting comp 97.4 0.00042 1.4E-08 60.5 8.5 120 277-404 21-165 (167)
254 3qwp_A SET and MYND domain-con 97.4 0.00028 9.4E-09 71.5 8.5 93 273-373 326-426 (429)
255 3qww_A SET and MYND domain-con 97.4 0.00032 1.1E-08 71.1 8.2 81 274-362 338-423 (433)
256 4e6h_A MRNA 3'-END-processing 97.2 0.0032 1.1E-07 67.4 14.3 115 292-423 325-462 (679)
257 4e6h_A MRNA 3'-END-processing 97.1 0.0011 3.9E-08 70.8 9.7 98 325-423 433-532 (679)
258 4h7y_A Dual specificity protei 97.1 0.0033 1.1E-07 53.9 10.2 100 290-398 33-132 (161)
259 1nzn_A CGI-135 protein, fissio 96.9 0.0036 1.2E-07 52.1 8.4 77 277-369 36-117 (126)
260 3o48_A Mitochondria fission 1 96.6 0.012 4E-07 49.3 9.4 63 291-369 58-121 (134)
261 2ff4_A Probable regulatory pro 96.5 0.016 5.3E-07 57.7 11.5 113 276-388 115-233 (388)
262 2uy1_A Cleavage stimulation fa 96.3 0.052 1.8E-06 55.6 14.6 142 276-420 213-379 (493)
263 1y8m_A FIS1; mitochondria, unk 96.3 0.023 7.9E-07 48.1 9.5 77 277-369 40-120 (144)
264 3ffl_A Anaphase-promoting comp 95.8 0.03 1E-06 48.7 8.3 89 328-416 22-144 (167)
265 4gns_B Protein CSD3, chitin bi 95.8 0.035 1.2E-06 59.8 10.6 64 323-386 334-397 (754)
266 2uy1_A Cleavage stimulation fa 95.7 0.14 4.9E-06 52.2 14.3 124 276-421 286-410 (493)
267 4g26_A Pentatricopeptide repea 95.1 0.4 1.4E-05 49.1 15.3 121 286-423 80-203 (501)
268 1zbp_A Hypothetical protein VP 94.8 0.18 6.1E-06 47.3 10.4 70 334-403 5-74 (273)
269 1ya0_A SMG-7 transcript varian 94.5 0.19 6.6E-06 51.5 10.9 80 328-407 154-233 (497)
270 3kae_A CDC27, possible protein 94.3 0.74 2.5E-05 40.2 12.3 75 323-397 59-151 (242)
271 3txn_A 26S proteasome regulato 94.3 0.21 7.2E-06 49.6 10.3 99 281-389 104-210 (394)
272 4b4t_R RPN7, 26S proteasome re 94.1 0.25 8.5E-06 49.6 10.7 102 277-391 132-239 (429)
273 1zbp_A Hypothetical protein VP 93.0 0.82 2.8E-05 42.8 11.4 63 284-362 5-67 (273)
274 4h7y_A Dual specificity protei 92.6 0.75 2.6E-05 39.3 9.6 92 322-414 9-114 (161)
275 4g26_A Pentatricopeptide repea 92.3 3.2 0.00011 42.3 16.0 129 279-424 29-169 (501)
276 2ff4_A Probable regulatory pro 92.3 1.7 5.8E-05 42.8 13.4 86 330-415 119-226 (388)
277 3txn_A 26S proteasome regulato 91.7 1.4 4.7E-05 43.7 11.8 93 328-420 101-207 (394)
278 4gns_B Protein CSD3, chitin bi 91.2 1.5 5.2E-05 47.1 12.3 108 291-415 264-392 (754)
279 1ya0_A SMG-7 transcript varian 91.1 0.83 2.8E-05 46.7 9.8 82 275-372 151-232 (497)
280 4b4t_P 26S proteasome regulato 90.0 2.2 7.4E-05 42.9 11.7 105 275-389 136-247 (445)
281 3mkq_A Coatomer beta'-subunit; 88.0 3.3 0.00011 43.7 12.0 47 335-386 661-707 (814)
282 3mkq_A Coatomer beta'-subunit; 87.2 4.3 0.00015 42.8 12.4 58 323-380 678-743 (814)
283 4b4t_S RPN3, 26S proteasome re 86.2 1 3.4E-05 46.2 6.3 71 324-394 229-304 (523)
284 3kae_A CDC27, possible protein 84.2 19 0.00063 31.5 12.3 90 323-417 30-137 (242)
285 3mkq_B Coatomer subunit alpha; 83.6 9.1 0.00031 33.3 10.4 47 336-387 15-61 (177)
286 2w2u_A Hypothetical P60 katani 81.5 3.7 0.00013 31.1 6.3 37 272-308 15-51 (83)
287 4fhn_B Nucleoporin NUP120; pro 79.4 1.6 5.6E-05 49.2 5.2 106 279-384 845-962 (1139)
288 3mkq_B Coatomer subunit alpha; 79.2 8.1 0.00028 33.7 8.5 31 275-305 33-63 (177)
289 4b4t_R RPN7, 26S proteasome re 79.1 3.6 0.00012 41.0 7.1 97 323-419 128-233 (429)
290 2v6y_A AAA family ATPase, P60 79.0 4.9 0.00017 30.4 6.2 36 273-308 8-43 (83)
291 3mv2_A Coatomer subunit alpha; 76.8 7.5 0.00026 37.2 8.2 122 275-398 113-245 (325)
292 4b4t_P 26S proteasome regulato 75.1 25 0.00085 35.0 12.1 95 324-418 135-242 (445)
293 3r9m_A BRO1 domain-containing 72.9 31 0.0011 33.6 11.8 99 291-389 141-282 (376)
294 2cpt_A SKD1 protein, vacuolar 72.5 4.9 0.00017 32.6 4.9 36 272-307 14-49 (117)
295 1qsa_A Protein (soluble lytic 72.5 12 0.00042 39.1 9.3 58 331-388 290-347 (618)
296 2v6x_A Vacuolar protein sortin 72.4 7.2 0.00025 29.4 5.6 36 272-307 9-44 (85)
297 3mkr_B Coatomer subunit alpha; 72.1 21 0.00072 34.0 10.0 118 276-395 102-233 (320)
298 1wfd_A Hypothetical protein 15 71.7 7.3 0.00025 30.1 5.6 36 273-308 12-47 (93)
299 4a5x_A MITD1, MIT domain-conta 71.5 7.2 0.00024 29.7 5.4 33 275-307 15-47 (86)
300 3kop_A Uncharacterized protein 70.6 4.8 0.00016 35.1 4.6 53 13-80 22-77 (188)
301 1wy6_A Hypothetical protein ST 68.7 27 0.00091 29.4 8.5 130 239-389 16-154 (172)
302 3rau_A Tyrosine-protein phosph 68.3 29 0.001 33.6 10.4 116 274-389 115-281 (363)
303 4fhn_B Nucleoporin NUP120; pro 67.4 12 0.00042 42.0 8.5 92 322-413 838-957 (1139)
304 3esl_A Checkpoint serine/threo 65.5 48 0.0016 29.3 10.3 86 297-390 58-145 (202)
305 2nnz_A Hypothetical protein; b 64.4 6.4 0.00022 33.5 4.1 32 13-47 30-61 (153)
306 3lpz_A GET4 (YOR164C homolog); 63.7 40 0.0014 32.4 10.1 108 275-383 34-159 (336)
307 3ax2_A Mitochondrial import re 63.2 21 0.0007 26.3 6.2 39 364-402 21-59 (73)
308 2crb_A Nuclear receptor bindin 62.6 51 0.0017 25.4 9.7 28 326-353 15-42 (97)
309 3t5v_B Nuclear mRNA export pro 62.1 17 0.00057 36.6 7.5 102 288-393 138-254 (455)
310 2cfu_A SDSA1; SDS-hydrolase, l 62.0 13 0.00043 39.3 6.9 54 359-412 448-501 (658)
311 3spa_A Mtrpol, DNA-directed RN 61.1 73 0.0025 35.5 12.6 102 275-389 126-230 (1134)
312 3spa_A Mtrpol, DNA-directed RN 61.1 70 0.0024 35.7 12.5 98 326-424 127-230 (1134)
313 2wpv_A GET4, UPF0363 protein Y 58.3 43 0.0015 31.8 9.2 27 358-384 132-158 (312)
314 1zb1_A BRO1 protein; AIP1, BRO 56.7 35 0.0012 33.3 8.7 98 291-388 144-285 (392)
315 3t5x_A PCI domain-containing p 53.8 26 0.00089 30.9 6.5 56 323-378 11-71 (203)
316 4gq2_M Nucleoporin NUP120; bet 53.1 53 0.0018 36.1 10.2 77 320-396 834-934 (950)
317 4b4t_S RPN3, 26S proteasome re 52.8 25 0.00086 35.9 6.9 131 285-422 145-298 (523)
318 2crb_A Nuclear receptor bindin 50.7 22 0.00075 27.4 4.6 29 360-388 15-43 (97)
319 2vkj_A TM1634; membrane protei 50.1 25 0.00085 26.9 4.8 32 274-305 51-82 (106)
320 3c3r_A Programmed cell death 6 49.8 78 0.0027 30.7 9.9 99 291-389 166-304 (380)
321 2dl1_A Spartin; SPG20, MIT, st 49.8 19 0.00066 28.9 4.4 44 340-391 17-60 (116)
322 4a1g_A Mitotic checkpoint seri 48.1 52 0.0018 27.7 7.1 81 297-390 49-131 (152)
323 2xs1_A Programmed cell death 6 47.6 1.1E+02 0.0037 32.4 11.2 99 291-389 151-289 (704)
324 2cpt_A SKD1 protein, vacuolar 47.1 48 0.0016 26.6 6.5 17 379-395 44-60 (117)
325 1om2_A Protein (mitochondrial 46.1 30 0.001 26.8 4.8 37 364-400 24-60 (95)
326 2w2u_A Hypothetical P60 katani 45.2 93 0.0032 23.2 8.2 15 337-351 30-44 (83)
327 2cfu_A SDSA1; SDS-hydrolase, l 45.2 33 0.0011 36.1 6.7 53 326-378 449-501 (658)
328 2rpa_A Katanin P60 ATPase-cont 45.1 15 0.00053 27.4 3.0 35 276-310 12-46 (78)
329 2o8p_A 14-3-3 domain containin 44.8 1.2E+02 0.004 27.4 9.3 60 288-355 137-197 (227)
330 2npm_A 14-3-3 domain containin 42.3 53 0.0018 30.3 6.8 55 291-354 171-226 (260)
331 4aez_C MAD3, mitotic spindle c 42.3 57 0.0019 29.4 6.8 81 297-390 98-180 (223)
332 2wpv_A GET4, UPF0363 protein Y 41.7 2.3E+02 0.0078 26.7 12.9 93 326-418 53-158 (312)
333 2rpa_A Katanin P60 ATPase-cont 41.7 1E+02 0.0036 22.8 8.2 53 363-415 15-73 (78)
334 3qnk_A Putative lipoprotein; a 41.5 1.9E+02 0.0065 29.0 11.6 48 342-389 153-211 (517)
335 1om2_A Protein (mitochondrial 41.3 42 0.0014 26.0 5.0 39 268-306 12-50 (95)
336 4gq2_M Nucleoporin NUP120; bet 40.7 45 0.0015 36.6 7.2 83 279-361 843-933 (950)
337 1qsa_A Protein (soluble lytic 39.7 78 0.0027 33.0 8.5 126 281-420 219-344 (618)
338 3hdx_A SUSD homolog, SUSD supe 39.3 99 0.0034 30.7 9.0 48 342-389 156-226 (478)
339 3re2_A Predicted protein; meni 38.7 69 0.0024 31.1 7.0 25 283-307 303-327 (472)
340 2wvi_A Mitotic checkpoint seri 38.6 1.8E+02 0.0062 24.6 10.7 63 322-390 62-126 (164)
341 2ymb_A MITD1, MIT domain-conta 38.4 6.6 0.00023 36.3 0.0 38 273-310 20-57 (257)
342 2v6y_A AAA family ATPase, P60 36.8 1.3E+02 0.0043 22.3 8.6 16 337-352 22-37 (83)
343 2br9_A 14-3-3E, 14-3-3 protein 36.7 82 0.0028 28.5 7.0 55 292-354 146-201 (234)
344 3u84_A Menin; MLL, JUND, ledgf 36.0 78 0.0027 31.3 7.0 48 295-353 298-345 (550)
345 3t5x_A PCI domain-containing p 34.3 81 0.0028 27.6 6.6 35 360-394 14-48 (203)
346 1wy6_A Hypothetical protein ST 32.3 1.1E+02 0.0037 25.7 6.4 35 322-356 121-155 (172)
347 3ubw_A 14-3-3E, 14-3-3 protein 32.3 1.1E+02 0.0036 28.3 7.0 54 292-353 172-226 (261)
348 3jq1_A SUSD superfamily protei 31.7 1.8E+02 0.0061 28.9 9.4 47 342-388 154-208 (481)
349 1o9d_A 14-3-3-like protein C; 31.6 1.1E+02 0.0037 28.2 7.0 54 292-353 151-205 (260)
350 2g0u_A Type III secretion syst 31.5 1.7E+02 0.006 22.3 7.0 43 376-418 32-74 (92)
351 3snx_A SUSD homolog, putative 31.4 89 0.0031 31.0 7.1 61 291-354 159-219 (460)
352 3uzd_A 14-3-3 protein gamma; s 30.6 1.2E+02 0.004 27.7 7.0 55 292-354 147-202 (248)
353 3myv_A SUSD superfamily protei 30.5 1.1E+02 0.0036 30.3 7.5 48 342-389 164-219 (454)
354 4a5x_A MITD1, MIT domain-conta 30.4 1.7E+02 0.0058 21.8 9.1 18 371-388 27-44 (86)
355 2yhe_A SEC-alkyl sulfatase; hy 36.6 11 0.00037 40.0 0.0 54 360-413 461-514 (668)
356 3u84_A Menin; MLL, JUND, ledgf 30.4 4.1E+02 0.014 26.3 11.3 61 345-405 298-369 (550)
357 2dl1_A Spartin; SPG20, MIT, st 29.6 69 0.0023 25.7 4.6 34 274-307 20-53 (116)
358 3qtm_A Uncharacterized protein 29.3 1.8E+02 0.0062 27.0 7.9 96 275-373 21-132 (346)
359 3i4g_A SUSD-like carbohydrate 29.0 2.8E+02 0.0095 27.9 10.5 93 290-388 93-226 (528)
360 3myv_A SUSD superfamily protei 29.0 97 0.0033 30.6 6.9 55 292-354 164-218 (454)
361 3lew_A SUSD-like carbohydrate 29.0 1E+02 0.0036 30.8 7.2 60 291-355 173-232 (495)
362 2ijq_A Hypothetical protein; s 28.3 1.5E+02 0.0051 25.1 6.9 71 276-354 32-103 (161)
363 3kez_A Putative sugar binding 28.0 1E+02 0.0034 30.5 6.8 55 292-354 170-224 (461)
364 4b4t_O 26S proteasome regulato 27.6 2.5E+02 0.0084 27.1 9.4 102 287-388 87-197 (393)
365 3otn_A SUSD superfamily protei 26.9 1.7E+02 0.0059 29.0 8.3 48 342-389 160-226 (482)
366 3kez_A Putative sugar binding 26.8 1.2E+02 0.004 30.0 7.1 48 342-389 170-225 (461)
367 2ijq_A Hypothetical protein; s 26.8 2.6E+02 0.009 23.5 8.2 60 330-389 36-104 (161)
368 3lew_A SUSD-like carbohydrate 25.8 1.4E+02 0.0048 29.9 7.4 48 342-389 174-232 (495)
369 4gq4_A Menin; tumor suppressor 25.0 1.2E+02 0.0042 30.0 6.3 31 323-353 300-330 (489)
370 3mcx_A SUSD superfamily protei 24.6 1.3E+02 0.0044 29.8 6.9 48 342-389 176-231 (477)
371 1wfd_A Hypothetical protein 15 24.2 2.3E+02 0.0079 21.3 8.9 15 380-394 42-56 (93)
372 3iqu_A 14-3-3 protein sigma; s 24.1 1.8E+02 0.0063 26.2 7.1 54 292-353 149-203 (236)
373 3ax2_A Mitochondrial import re 23.9 1.4E+02 0.0049 21.7 5.1 34 330-363 21-54 (73)
374 2wb7_A PT26-6P; extra chromoso 23.8 4.8E+02 0.016 26.3 10.5 19 292-310 448-466 (526)
375 3efz_A 14-3-3 protein; 14-3-3, 23.8 1.7E+02 0.0056 27.1 6.7 58 292-355 168-226 (268)
376 3re2_A Predicted protein; meni 23.7 5.1E+02 0.018 25.1 11.9 61 345-405 276-347 (472)
377 2vkj_A TM1634; membrane protei 23.6 2.4E+02 0.0081 21.5 6.3 28 326-353 53-80 (106)
378 3mcx_A SUSD superfamily protei 22.2 1.2E+02 0.0041 30.1 6.1 34 322-355 198-231 (477)
379 2ca5_A MXIH; transport protein 21.9 2.3E+02 0.0079 21.2 5.9 30 377-406 27-56 (85)
380 3hdx_A SUSD homolog, SUSD supe 21.7 1.6E+02 0.0054 29.2 6.9 34 322-355 193-226 (478)
381 3qnk_A Putative lipoprotein; a 21.4 1.5E+02 0.0053 29.7 6.8 59 292-355 153-211 (517)
382 2yhe_A SEC-alkyl sulfatase; hy 26.3 21 0.00071 37.8 0.0 53 327-379 462-514 (668)
383 2v6x_A Vacuolar protein sortin 20.5 2.6E+02 0.0088 20.5 8.9 17 372-388 25-41 (85)
No 1
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=100.00 E-value=2.4e-62 Score=492.69 Aligned_cols=314 Identities=42% Similarity=0.704 Sum_probs=280.5
Q ss_pred CceEEEEEEECCeeeeeEEEEecCCCChHHHHHHHHhhhCCCCCCCC-CccccccCCcccccccccEEeeCccccCCCCC
Q psy6102 10 NYIVFLDVSIGEEKVGRMVIELFKHIVPKTAENFRALCTGEYGKGKL-GKALHFTGSHFHRIIPQFMIQGGDITNFNGTG 88 (426)
Q Consensus 10 ~~~~~~~~~~~~~~~G~i~~~l~~~~~P~~~~nf~~l~~~~~~~~~~-~k~~~y~~~~f~rv~~~~~iq~G~~~~~~~~~ 88 (426)
+|+|||||+|++++.|+|+||||++.||+||+||++||++++|.|.. ++..||+|+.||||||+|||||||++.++|+|
T Consensus 15 ~~~v~~~~~~~~~~~G~i~~~l~~~~~P~t~~nf~~l~~~~~~~~~~~g~~~~y~~~~fhrv~~~f~~q~Gd~~~~~g~g 94 (370)
T 1ihg_A 15 NPRVFFDVDIGGERVGRIVLELFADIVPKTAENFRALCTGEKGIGPTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTG 94 (370)
T ss_dssp SCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTSSBSCCTTCBEEEEETTTEEEECCTTTSSSSC
T ss_pred CCeEEEEEEECCEecccEEEEEcCCCCchHHHHHHHHcCCCcCcCccCCCcceeCCcEeEEEECCcEEECCCCCCCCCCC
Confidence 89999999999999999999999999999999999999998887643 55668999999999999999999999899999
Q ss_pred CccccCCCcCCccccccCCCCCCCCCCcchhhhhhhhhhcceeeeeeccccCCCCCCCCCCCccccceEEEEeecccccc
Q psy6102 89 GESIYGPCFEDENFKLKGIYPKNKYPGIYPSLVKAMFRMLTFTSMVCLFSLGSGLGLGLASTLVGSYQFSCTVSFLNTFT 168 (426)
Q Consensus 89 ~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~sqF~i~~~~~~~~~ 168 (426)
|+|+||.+|+||++.++|+. ||+ ||||+. | |+ ++|||||||++
T Consensus 95 ~~~~~~~~~~~e~~~~~~~~-----~g~--------------l~ma~~---~-------~~--~~~sqffi~~~------ 137 (370)
T 1ihg_A 95 GESIYGEKFEDENFHYKHDK-----EGL--------------LSMANA---G-------SN--TNGSQFFITTV------ 137 (370)
T ss_dssp CCBTTBSCBCCCCCCBCCCS-----TTE--------------EEECCS---S-------TT--CBCSCEEEESS------
T ss_pred CCCCCCCCcCCCcCCcCCCC-----CeE--------------EEEeeC---C-------CC--CCCceEEEeCC------
Confidence 99999999999999999998 999 999999 8 99 99999999999
Q ss_pred CchhhhhhhhHHHHHHHHhhhhhhhhhhhchhhhhHhhhcchHHHhhhccCCCCccchhHHHHHhhhcccccceechhhc
Q psy6102 169 NNCEIHLQRLNVKLRKIEADLSILEAKHYYNQGALEKKRGITEHKKKLETGRGKEISRKQYRDLVKKKKKKNGIFGCVRQ 248 (426)
Q Consensus 169 ~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~vFG~Vie 248 (426)
++| |||+ .|++||+|++
T Consensus 138 -~~~-~ld~-------------------------------------------------------------~~~vfG~v~~ 154 (370)
T 1ihg_A 138 -PTP-HLDG-------------------------------------------------------------KHVVFGQVIK 154 (370)
T ss_dssp -CCG-GGTT-------------------------------------------------------------TSCEEEEEEE
T ss_pred -CCc-ccCC-------------------------------------------------------------CceEEEEEec
Confidence 999 9999 9999999999
Q ss_pred cccHHHHHhhchhhCCcccc-----------------------------------------cchhhhHHHHHHhccchhh
Q psy6102 249 GFGVAREVSYVEAENDKPLV-----------------------------------------LNQMEDVIRTIKNSGNEYF 287 (426)
Q Consensus 249 Gldvl~~I~~l~~~~~~P~~-----------------------------------------~i~ilk~a~~~~~~G~~~f 287 (426)
|++++++|+...+..++|.. .......+..++.+|+.++
T Consensus 155 g~~v~~~i~~~~~~~~~P~~~v~I~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~g~~~~ 234 (370)
T 1ihg_A 155 GMGVAKILENVEVKGEKPAKLCVIAECGELKEGDDWGIFPKDGSGDSHPDFPEDADVDLKDVDKILLISEDLKNIGNTFF 234 (370)
T ss_dssp CHHHHHHHHTSCEETTEESSCEEEEEEEEECTTCCCCCSCCSSSCCCSCSSGGGSSSCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHcCCCCCCccceeEEEEEEEEeccCccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHH
Confidence 99999999987764343332 1112335677999999999
Q ss_pred hhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q psy6102 288 KLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLMEPNNVKALFRRG 367 (426)
Q Consensus 288 ~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ldp~~~kal~~lg 367 (426)
+.|+|++|+..|++|+++++........+....++|.+..+|.++|.|++++++|++|+.+|++||+++|+++++|+++|
T Consensus 235 ~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg 314 (370)
T 1ihg_A 235 KSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEALEIDPSNTKALYRRA 314 (370)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHH
T ss_pred HhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHhCchhHHHHHHHH
Confidence 99999999999999999766543222234444568899999999999999999999999999999999999999999999
Q ss_pred HHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhhHHHHHHHHHHhhhc
Q psy6102 368 RAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLNLEKMTYARMFQ 423 (426)
Q Consensus 368 ~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~~~l~~i~~~l~~~~~a~k~~~~k~f~ 423 (426)
.+|..+|++++|+.+|++|++++|++..++..++.++..+++.+++++..+++||+
T Consensus 315 ~~~~~~g~~~eA~~~l~~Al~l~P~~~~~~~~l~~~~~~~~~~~~a~k~~~~kmf~ 370 (370)
T 1ihg_A 315 QGWQGLKEYDQALADLKKAQEIAPEDKAIQAELLKVKQKIKAQKDKEKAAYAKMFA 370 (370)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHCCC-----
T ss_pred HHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 99999999999999999999999999999999999999999999999999999985
No 2
>2igv_A Peptidyl-prolyl CIS-trans isomerase 3; rotamase; 1.67A {Caenorhabditis elegans} SCOP: b.62.1.1 PDB: 1e3b_A 1e8k_A 1dyw_A 2igw_A 2hqj_A
Probab=100.00 E-value=2e-45 Score=329.39 Aligned_cols=166 Identities=51% Similarity=0.802 Sum_probs=156.1
Q ss_pred CCceEEEEEEECCeeeeeEEEEecCCCChHHHHHHHHhhhCCCCCCCCCccccccCCcccccccccEEeeCccccCCCCC
Q psy6102 9 GNYIVFLDVSIGEEKVGRMVIELFKHIVPKTAENFRALCTGEYGKGKLGKALHFTGSHFHRIIPQFMIQGGDITNFNGTG 88 (426)
Q Consensus 9 ~~~~~~~~~~~~~~~~G~i~~~l~~~~~P~~~~nf~~l~~~~~~~~~~~k~~~y~~~~f~rv~~~~~iq~G~~~~~~~~~ 88 (426)
.+|+|||||+|++++.|+|+||||++.||+||+||++||++++|.|..+|..||+|+.||||+|+|||||||++.++|+|
T Consensus 2 ~~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~g~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~G~g 81 (173)
T 2igv_A 2 SRSKVFFDITIGGKASGRIVMELYDDVVPKTAGNFRALCTGENGIGKSGKPLHFKGSKFHRIIPNFMIQGGDFTRGNGTG 81 (173)
T ss_dssp CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTCBCTTSSBSCCTTCBCCEEETTTEEEECCTTTSSSSC
T ss_pred CCCEEEEEEEECCEecceEEEEEeCCCCcHHHHHHHHHhcCCCCCCccCccceECCCEEEEEECCCEEEcCCCCCCCCCC
Confidence 58999999999999999999999999999999999999999877776778889999999999999999999998889999
Q ss_pred CccccCCCcCCccccccCCCCCCCCCCcchhhhhhhhhhcceeeeeeccccCCCCCCCCCCCccccceEEEEeecccccc
Q psy6102 89 GESIYGPCFEDENFKLKGIYPKNKYPGIYPSLVKAMFRMLTFTSMVCLFSLGSGLGLGLASTLVGSYQFSCTVSFLNTFT 168 (426)
Q Consensus 89 ~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~sqF~i~~~~~~~~~ 168 (426)
|.|+||++|+||++.++|++ ||+ ||||+. | |+ +++||||||+.
T Consensus 82 g~siyg~~f~dE~~~l~h~~-----~G~--------------lsmAn~---g-------p~--tngSQFfIt~~------ 124 (173)
T 2igv_A 82 GESIYGEKFPDENFKEKHTG-----PGV--------------LSMANA---G-------PN--TNGSQFFLCTV------ 124 (173)
T ss_dssp CCBTTBSCBCCCCCCSCCCS-----TTE--------------EEECCS---S-------TT--CBSSCEEEESS------
T ss_pred CCccCCCcccCcccccCCCC-----CeE--------------EEEeeC---C-------CC--CcceEEEEEcC------
Confidence 99999999999999999998 899 999999 8 99 99999999999
Q ss_pred CchhhhhhhhHHHHHHHHhhhhhhhhhhhchhhhhHhhhcchHHHhhhccCCCCccchhHHHHHhhhcccccceechhhc
Q psy6102 169 NNCEIHLQRLNVKLRKIEADLSILEAKHYYNQGALEKKRGITEHKKKLETGRGKEISRKQYRDLVKKKKKKNGIFGCVRQ 248 (426)
Q Consensus 169 ~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~vFG~Vie 248 (426)
++| |||+ +|++||+|++
T Consensus 125 -~~~-~LDg-------------------------------------------------------------~~~vFG~Vv~ 141 (173)
T 2igv_A 125 -KTE-WLDG-------------------------------------------------------------KHVVFGRVVE 141 (173)
T ss_dssp -CCG-GGTT-------------------------------------------------------------TSCEEEEEEE
T ss_pred -Ccc-ccCC-------------------------------------------------------------CeeEEEEEec
Confidence 999 9999 9999999999
Q ss_pred cccHHHHHhhchhhCCcccccchhhh
Q psy6102 249 GFGVAREVSYVEAENDKPLVLNQMED 274 (426)
Q Consensus 249 Gldvl~~I~~l~~~~~~P~~~i~ilk 274 (426)
|++++++|+.+.+.+++|..++.|.+
T Consensus 142 G~dvv~~I~~~~t~~~~P~~~v~I~~ 167 (173)
T 2igv_A 142 GLDVVKAVESNGSQSGKPVKDCMIAD 167 (173)
T ss_dssp CHHHHHHHHTTCCTTSCCSSCEEEEE
T ss_pred CHHHHHHHHhCCCCCCCCCCCEEEEE
Confidence 99999999999888888888776643
No 3
>1a58_A Cyclophilin; isomerase, ppiase; 1.95A {Brugia malayi} SCOP: b.62.1.1 PDB: 1a33_A 1c5f_A*
Probab=100.00 E-value=1.9e-45 Score=330.69 Aligned_cols=169 Identities=43% Similarity=0.729 Sum_probs=155.6
Q ss_pred ccCCCceEEEEEEECCeeeeeEEEEecCCCChHHHHHHHHhhhCCCCCCCC-CccccccCCcccccccccEEeeCccccC
Q psy6102 6 CKEGNYIVFLDVSIGEEKVGRMVIELFKHIVPKTAENFRALCTGEYGKGKL-GKALHFTGSHFHRIIPQFMIQGGDITNF 84 (426)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~G~i~~~l~~~~~P~~~~nf~~l~~~~~~~~~~-~k~~~y~~~~f~rv~~~~~iq~G~~~~~ 84 (426)
++..|++|||||+|++++.|+|+||||++.||+||+||++||++++|.|.. +|..||+|+.||||+|+|||||||++.+
T Consensus 2 ~~~~~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~~~~g~~~~Y~g~~FhRvi~~f~iQgGd~~~~ 81 (177)
T 1a58_A 2 SKKDRRRVFLDVTIDGNLAGRIVMELYNDIAPRTCNNFLMLCTGMAGTGKISGKPLHYKGSTFHRVIKNFMIQGGDFTKG 81 (177)
T ss_dssp CGGGCEEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBCCCTTCBEEEEETTTEEEECCCSSS
T ss_pred CCCCCcEEEEEEEECCEeceeEEEEEcCCCCchHHHHHHHHhcCCcCcccccCCcceeCCCEEEEEECCCEEEeCCccCC
Confidence 455799999999999999999999999999999999999999998876643 4566999999999999999999999888
Q ss_pred CCCCCccccCCCcCCccccccCCCCCCCCCCcchhhhhhhhhhcceeeeeeccccCCCCCCCCCCCccccceEEEEeecc
Q psy6102 85 NGTGGESIYGPCFEDENFKLKGIYPKNKYPGIYPSLVKAMFRMLTFTSMVCLFSLGSGLGLGLASTLVGSYQFSCTVSFL 164 (426)
Q Consensus 85 ~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~sqF~i~~~~~ 164 (426)
+|+||+|+||..|+||++.++|++ ||+ |||||. | |+ +++||||||+.
T Consensus 82 ~g~gg~si~g~~f~dE~~~~~h~~-----~G~--------------lsmAn~---g-------p~--tngSQFfIt~~-- 128 (177)
T 1a58_A 82 DGTGGESIYGGMFDDEEFVMKHDE-----PFV--------------VSMANK---G-------PN--TNGSQFFITTT-- 128 (177)
T ss_dssp SSSCCCCTTSSCBCCCCCCSCCCS-----SSE--------------EEECCS---S-------TT--CBCSCEEEESS--
T ss_pred CCCCCCcccCCcccCcccCcccCC-----CeE--------------EEEeeC---C-------CC--CceeEEEEECC--
Confidence 999999999999999999999998 999 999999 8 99 99999999999
Q ss_pred ccccCchhhhhhhhHHHHHHHHhhhhhhhhhhhchhhhhHhhhcchHHHhhhccCCCCccchhHHHHHhhhcccccceec
Q psy6102 165 NTFTNNCEIHLQRLNVKLRKIEADLSILEAKHYYNQGALEKKRGITEHKKKLETGRGKEISRKQYRDLVKKKKKKNGIFG 244 (426)
Q Consensus 165 ~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~vFG 244 (426)
++| |||+ +|++||
T Consensus 129 -----~~~-~LDg-------------------------------------------------------------~~~VFG 141 (177)
T 1a58_A 129 -----PAP-HLNN-------------------------------------------------------------IHVVFG 141 (177)
T ss_dssp -----CCG-GGTT-------------------------------------------------------------TSCEEE
T ss_pred -----CCC-ccCC-------------------------------------------------------------CEEEEE
Confidence 999 9999 999999
Q ss_pred hhhccccHHHHHhhchhh-CCcccccchhhh
Q psy6102 245 CVRQGFGVAREVSYVEAE-NDKPLVLNQMED 274 (426)
Q Consensus 245 ~VieGldvl~~I~~l~~~-~~~P~~~i~ilk 274 (426)
+|++|++++++|+.+++. .++|...+.|.+
T Consensus 142 ~Vv~G~dvv~~I~~~~~~~~~~P~~~v~I~~ 172 (177)
T 1a58_A 142 KVVSGQEVVTKIEYLKTNSKNRPLADVVILN 172 (177)
T ss_dssp EEEECHHHHHHHHTSCBCTTSCBSSCEEEEE
T ss_pred EEEcCHHHHHHHHhCCCCCCCcCCCCeEEEE
Confidence 999999999999999984 578887776643
No 4
>2wfi_A Peptidyl-prolyl CIS-trans isomerase G; phosphoprotein, PRE-mRNA splicing, alternative splicing, nucleus, rotamase, cyclosporin; HET: OCS; 0.75A {Homo sapiens} PDB: 2wfj_A* 2gw2_A
Probab=100.00 E-value=3.8e-45 Score=329.18 Aligned_cols=168 Identities=41% Similarity=0.665 Sum_probs=154.9
Q ss_pred cCCCceEEEEEEECCeeeeeEEEEecCCCChHHHHHHHHhhhCCCCCCC-CCccccccCCcccccccccEEeeCccccCC
Q psy6102 7 KEGNYIVFLDVSIGEEKVGRMVIELFKHIVPKTAENFRALCTGEYGKGK-LGKALHFTGSHFHRIIPQFMIQGGDITNFN 85 (426)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~G~i~~~l~~~~~P~~~~nf~~l~~~~~~~~~-~~k~~~y~~~~f~rv~~~~~iq~G~~~~~~ 85 (426)
+..+|+||||++|++|+.|+|+||||++.||+||+||++||+|++|.|. .+|.+||+|+.||||||+|||||||++.++
T Consensus 6 ~~~~~~vf~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~ 85 (179)
T 2wfi_A 6 KVQRPRCFFDIAINNQPAGRVVFELFSDVCPKTCENFRCLCTGEKGTGKSTQKPLHYKSCLFHRVVKDFMVQGGDFSEGN 85 (179)
T ss_dssp --CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBSCCTTCBEEEEETTTEEEECCTTTSS
T ss_pred CCCCCeEEEEEEECCccceEEEEEEcCCCCChHHHHHHHHhcCCcCcccccccCCeECCCEEEEEECCCEEEcccccCCC
Confidence 4468999999999999999999999999999999999999999887663 357899999999999999999999998889
Q ss_pred CCCCccccCCCcCCccccccCCCCCCCCCCcchhhhhhhhhhcceeeeeeccccCCCCCCCCCCCccccceEEEEeeccc
Q psy6102 86 GTGGESIYGPCFEDENFKLKGIYPKNKYPGIYPSLVKAMFRMLTFTSMVCLFSLGSGLGLGLASTLVGSYQFSCTVSFLN 165 (426)
Q Consensus 86 ~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~sqF~i~~~~~~ 165 (426)
|+||+|+||..|+||++.++|++ ||+ |||||. | |+ +++||||||+.
T Consensus 86 g~gg~si~g~~f~dE~~~~~h~~-----~G~--------------lsMAn~---g-------p~--tngSQFfIt~~--- 131 (179)
T 2wfi_A 86 GRGGESIYGGFFEDESFAVKHNK-----EFL--------------LSMANR---G-------KD--TNGSQFFITTK--- 131 (179)
T ss_dssp SSCCCCTTSSCBCCCCCCSCCCS-----TTE--------------EEECCS---S-------TT--CBCSCEEEESS---
T ss_pred CCCCCcccCCcccccccCcCcCC-----CeE--------------EEEEeC---C-------CC--CcceEEEEEcC---
Confidence 99999999999999999999998 999 999999 8 99 99999999999
Q ss_pred cccCchhhhhhhhHHHHHHHHhhhhhhhhhhhchhhhhHhhhcchHHHhhhccCCCCccchhHHHHHhhhcccccceech
Q psy6102 166 TFTNNCEIHLQRLNVKLRKIEADLSILEAKHYYNQGALEKKRGITEHKKKLETGRGKEISRKQYRDLVKKKKKKNGIFGC 245 (426)
Q Consensus 166 ~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~vFG~ 245 (426)
++| |||+ +|++||+
T Consensus 132 ----~~~-~LDg-------------------------------------------------------------~~tVFG~ 145 (179)
T 2wfi_A 132 ----PTP-HLDG-------------------------------------------------------------HHVVFGQ 145 (179)
T ss_dssp ----CCG-GGTT-------------------------------------------------------------TSCEEEE
T ss_pred ----CCc-ccCC-------------------------------------------------------------CeeEEEE
Confidence 999 9999 9999999
Q ss_pred hhccccHHHHHhhchh-hCCcccccchhhh
Q psy6102 246 VRQGFGVAREVSYVEA-ENDKPLVLNQMED 274 (426)
Q Consensus 246 VieGldvl~~I~~l~~-~~~~P~~~i~ilk 274 (426)
|++|++++++|+.+++ ..++|...+.|.+
T Consensus 146 Vv~G~dvv~~I~~~~t~~~~~P~~~v~I~~ 175 (179)
T 2wfi_A 146 VISGQEVVREIENQKTDAASKPFAEVRILS 175 (179)
T ss_dssp EEECHHHHHHHHTCCBCTTSCBSSCEEEEE
T ss_pred EeCCHHHHHHHHcCCCCCCCCCCCCeEEEe
Confidence 9999999999999998 4578888776643
No 5
>2poy_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, isomerase, S genomics, structural genomics consortium; HET: BMT; 1.80A {Cryptosporidium parvum iowa II} PDB: 2plu_A*
Probab=100.00 E-value=6.6e-45 Score=328.77 Aligned_cols=170 Identities=48% Similarity=0.754 Sum_probs=155.9
Q ss_pred cccCCCceEEEEEEECCeeeeeEEEEecCCCChHHHHHHHHhhhCCCCCCCCCccccccCCcccccccccEEeeCccccC
Q psy6102 5 ICKEGNYIVFLDVSIGEEKVGRMVIELFKHIVPKTAENFRALCTGEYGKGKLGKALHFTGSHFHRIIPQFMIQGGDITNF 84 (426)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~G~i~~~l~~~~~P~~~~nf~~l~~~~~~~~~~~k~~~y~~~~f~rv~~~~~iq~G~~~~~ 84 (426)
.+...+++|||||+|++++.|+|+||||++.||+||+||++||+|++|.|..+|..+|+|+.||||||+|||||||++.+
T Consensus 14 ~~~~~~~~v~~di~i~~t~~G~I~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~~~~Y~g~~FhRVi~~f~iQgGd~~~~ 93 (186)
T 2poy_A 14 LYFQGNPVVYFDISIGQTPAGRITMELFADKVPITAENFRALCTGEKGMGQSGKPLCYTGSFFHRIIPQFMIQGGDFTRG 93 (186)
T ss_dssp ----CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTCBCTTSSBSCCTTCBCCEEETTTEEEECCTTTS
T ss_pred cccCCCCEEEEEEeECCEecccEEEEEeCCCCcHHHHHHHHHhcccCCccccCccceECCCEEEEEeCCCEEEeCCCCCC
Confidence 45678999999999999999999999999999999999999999988777777888899999999999999999999888
Q ss_pred CCCCCccccCCCcCCccccccCCCCCCCCCCcchhhhhhhhhhcceeeeeeccccCCCCCCCCCCCccccceEEEEeecc
Q psy6102 85 NGTGGESIYGPCFEDENFKLKGIYPKNKYPGIYPSLVKAMFRMLTFTSMVCLFSLGSGLGLGLASTLVGSYQFSCTVSFL 164 (426)
Q Consensus 85 ~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~sqF~i~~~~~ 164 (426)
+|+||.|+||+.|+||++.++|.+ ||+ ||||+. | |+ +++||||||+.
T Consensus 94 ~G~gg~si~g~~f~dE~~~l~h~~-----~G~--------------lsMAn~---g-------pn--tngSQFFIt~~-- 140 (186)
T 2poy_A 94 DGTGGESIYGSKFRDENFVYTHDA-----PFL--------------LSMANA---G-------PN--TNGSQFFITTV-- 140 (186)
T ss_dssp SSSCCCCTTC-CBCCCCCCSCCCS-----TTE--------------EEECCS---S-------TT--CBCSCEEEESS--
T ss_pred CCCCCCccCCCcccCcccccccCC-----CcE--------------EEEeeC---C-------CC--CcccEEEEECC--
Confidence 999999999999999999999998 899 999999 8 99 99999999999
Q ss_pred ccccCchhhhhhhhHHHHHHHHhhhhhhhhhhhchhhhhHhhhcchHHHhhhccCCCCccchhHHHHHhhhcccccceec
Q psy6102 165 NTFTNNCEIHLQRLNVKLRKIEADLSILEAKHYYNQGALEKKRGITEHKKKLETGRGKEISRKQYRDLVKKKKKKNGIFG 244 (426)
Q Consensus 165 ~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~vFG 244 (426)
+++ |||+ +|++||
T Consensus 141 -----~~~-~LDg-------------------------------------------------------------~~tVFG 153 (186)
T 2poy_A 141 -----PCP-WLDG-------------------------------------------------------------KHVVFG 153 (186)
T ss_dssp -----CCG-GGTT-------------------------------------------------------------TSCEEE
T ss_pred -----CCc-ccCC-------------------------------------------------------------CeeEEE
Confidence 999 9999 999999
Q ss_pred hhhccccHHHHHhhchhhCCcccccchhhh
Q psy6102 245 CVRQGFGVAREVSYVEAENDKPLVLNQMED 274 (426)
Q Consensus 245 ~VieGldvl~~I~~l~~~~~~P~~~i~ilk 274 (426)
+|++|++++++|+.+.+.+++|..++.|.+
T Consensus 154 ~Vv~Gmdvv~~I~~~~t~~~~P~~~v~I~~ 183 (186)
T 2poy_A 154 KVLEGMEVVKSIEKCGSQNGKPTKSVCITA 183 (186)
T ss_dssp EEEECHHHHHHHHHTCCTTSCCSSCEEEEE
T ss_pred EEecCHHHHHHHHhCCCCCCCCCCCEEEEe
Confidence 999999999999999988888888776643
No 6
>2he9_A NK-tumor recognition protein; cyclosporin, isomerase, membrane, repeat, rotamase, peptidylprolyl isomerase, structural genomics; 2.00A {Homo sapiens}
Probab=100.00 E-value=6.8e-45 Score=330.28 Aligned_cols=170 Identities=41% Similarity=0.674 Sum_probs=154.4
Q ss_pred cccCCCceEEEEEEECCeeeeeEEEEecCCCChHHHHHHHHhhhCCCCCCC-CCccccccCCcccccccccEEeeCcccc
Q psy6102 5 ICKEGNYIVFLDVSIGEEKVGRMVIELFKHIVPKTAENFRALCTGEYGKGK-LGKALHFTGSHFHRIIPQFMIQGGDITN 83 (426)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~G~i~~~l~~~~~P~~~~nf~~l~~~~~~~~~-~~k~~~y~~~~f~rv~~~~~iq~G~~~~ 83 (426)
.+...+|+||||++|++|+.|+|+||||++.||+||+||++||+|++|.|. .+|.+||+|+.||||||+|||||||++.
T Consensus 14 ~~~~~~~~vf~di~i~~t~~G~I~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~k~~~Y~g~~FhRVi~~fmiQgGd~~~ 93 (192)
T 2he9_A 14 LVPRGSPQCHFDIEINREPVGRIMFQLFSDICPKTCKNFLCLCSGEKGLGKTTGKKLCYKGSTFHRVVKNFMIQGGDFSE 93 (192)
T ss_dssp -----CCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBSCCTTCBEEEEETTTEEEECCTTT
T ss_pred ccccCCCeEEEEEEECCEecceEEEEEcCCCCchHHHHHHHHhcCCCCcccccccCCeECCCEEEEEECCCEEEcCcccC
Confidence 456789999999999999999999999999999999999999999887663 3578999999999999999999999988
Q ss_pred CCCCCCccccCCCcCCccccccCCCCCCCCCCcchhhhhhhhhhcceeeeeeccccCCCCCCCCCCCccccceEEEEeec
Q psy6102 84 FNGTGGESIYGPCFEDENFKLKGIYPKNKYPGIYPSLVKAMFRMLTFTSMVCLFSLGSGLGLGLASTLVGSYQFSCTVSF 163 (426)
Q Consensus 84 ~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~sqF~i~~~~ 163 (426)
++|+||+|+||+.|+||++.++|++ ||+ |||||. | |+ +++||||||+.
T Consensus 94 ~~G~gg~siyg~~f~dE~~~l~h~~-----~G~--------------lsMAn~---g-------p~--tngSQFFIt~~- 141 (192)
T 2he9_A 94 GNGKGGESIYGGYFKDENFILKHDR-----AFL--------------LSMANR---G-------KH--TNGSQFFITTK- 141 (192)
T ss_dssp SSSSCCCCTTSSCBCCCCCCSCCCS-----TTE--------------EEECCS---S-------TT--CBCSCEEEESS-
T ss_pred CCCCCCCcccCCcccCccccCCCCC-----CeE--------------EEEEeC---C-------CC--CcceEEEEEcC-
Confidence 8999999999999999999999998 999 999999 8 99 99999999999
Q ss_pred cccccCchhhhhhhhHHHHHHHHhhhhhhhhhhhchhhhhHhhhcchHHHhhhccCCCCccchhHHHHHhhhccccccee
Q psy6102 164 LNTFTNNCEIHLQRLNVKLRKIEADLSILEAKHYYNQGALEKKRGITEHKKKLETGRGKEISRKQYRDLVKKKKKKNGIF 243 (426)
Q Consensus 164 ~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~vF 243 (426)
++| |||+ +|++|
T Consensus 142 ------~~~-~LDg-------------------------------------------------------------~~tVF 153 (192)
T 2he9_A 142 ------PAP-HLDG-------------------------------------------------------------VHVVF 153 (192)
T ss_dssp ------CCG-GGTT-------------------------------------------------------------TSCEE
T ss_pred ------CCc-ccCC-------------------------------------------------------------CccEE
Confidence 999 9999 99999
Q ss_pred chhhccccHHHHHhhchh-hCCcccccchhhh
Q psy6102 244 GCVRQGFGVAREVSYVEA-ENDKPLVLNQMED 274 (426)
Q Consensus 244 G~VieGldvl~~I~~l~~-~~~~P~~~i~ilk 274 (426)
|+|++|++++++|+.+++ ..++|...+.|.+
T Consensus 154 G~Vv~Gmdvv~~I~~~~t~~~~~P~~~v~I~~ 185 (192)
T 2he9_A 154 GLVISGFEVIEQIENLKTDAASRPYADVRVID 185 (192)
T ss_dssp EEEEECHHHHHHHHTSCBCTTSCBSSCEEEEE
T ss_pred EEEEeCHHHHHHHHcCCcCCCCCCcCCeEEEE
Confidence 999999999999999988 4578888776643
No 7
>1qng_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, cyclophilin-cyclosporin complex, immunosuppressant, cyclophilin; HET: BMT; 2.1A {Plasmodium falciparum} SCOP: b.62.1.1 PDB: 1qnh_A*
Probab=100.00 E-value=1.6e-44 Score=322.74 Aligned_cols=165 Identities=49% Similarity=0.767 Sum_probs=153.3
Q ss_pred CCceEEEEEEECCeeeeeEEEEecCCCChHHHHHHHHhhhCCCCCCCCCccccccCCcccccccccEEeeCccccCCCCC
Q psy6102 9 GNYIVFLDVSIGEEKVGRMVIELFKHIVPKTAENFRALCTGEYGKGKLGKALHFTGSHFHRIIPQFMIQGGDITNFNGTG 88 (426)
Q Consensus 9 ~~~~~~~~~~~~~~~~G~i~~~l~~~~~P~~~~nf~~l~~~~~~~~~~~k~~~y~~~~f~rv~~~~~iq~G~~~~~~~~~ 88 (426)
.+++|||||+|++++.|+|+||||++.||+||+||++||+++ |.|..++..+|+|+.||||+|+|||||||++.++|+|
T Consensus 2 ~~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~-g~g~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~g~g 80 (170)
T 1qng_A 2 KRSKVFFDISIDNSNAGRIIFELFSDITPRTCENFRALCTGE-KIGSRGKNLHYKNSIFHRIIPQFMCQGGDITNGNGSG 80 (170)
T ss_dssp CSCEEEEEEEESSSEEEEEEEEECTTTCHHHHHHHHHHHHTC-EECTTSSEECCTTCBCCEEETTTEEEECCTTTSSSSC
T ss_pred CCCEEEEEEeECCEeceeEEEEEcCCCCCHHHHHHHHHhccC-CcCccCccceECCCEEEEEECCCEEEcCCccCCCCCC
Confidence 589999999999999999999999999999999999999875 4445567778999999999999999999998889999
Q ss_pred CccccCCCcCCccccccCCCCCCCCCCcchhhhhhhhhhcceeeeeeccccCCCCCCCCCCCccccceEEEEeecccccc
Q psy6102 89 GESIYGPCFEDENFKLKGIYPKNKYPGIYPSLVKAMFRMLTFTSMVCLFSLGSGLGLGLASTLVGSYQFSCTVSFLNTFT 168 (426)
Q Consensus 89 ~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~sqF~i~~~~~~~~~ 168 (426)
|.|+||+.|+||++.++|++ ||+ ||||+. | |+ +++||||||+.
T Consensus 81 g~si~g~~f~dE~~~l~h~~-----~G~--------------lsmAn~---g-------p~--tngSQFfIt~~------ 123 (170)
T 1qng_A 81 GESIYGRSFTDENFNMKHDQ-----PGL--------------LSMANA---G-------PN--TNSSQFFITLV------ 123 (170)
T ss_dssp CCBTTBSCBCCCCCCSCCCS-----TTE--------------EEECCS---S-------TT--CBCSCEEEESS------
T ss_pred CccccCCcccccccccccCC-----CCE--------------EEEeec---C-------CC--CcccEEEEECC------
Confidence 99999999999999999998 899 999999 8 99 99999999999
Q ss_pred CchhhhhhhhHHHHHHHHhhhhhhhhhhhchhhhhHhhhcchHHHhhhccCCCCccchhHHHHHhhhcccccceechhhc
Q psy6102 169 NNCEIHLQRLNVKLRKIEADLSILEAKHYYNQGALEKKRGITEHKKKLETGRGKEISRKQYRDLVKKKKKKNGIFGCVRQ 248 (426)
Q Consensus 169 ~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~vFG~Vie 248 (426)
+++ |||+ +|++||+|++
T Consensus 124 -~~~-~Ldg-------------------------------------------------------------~~~vFG~Vv~ 140 (170)
T 1qng_A 124 -PCP-WLDG-------------------------------------------------------------KHVVFGKVIE 140 (170)
T ss_dssp -CCG-GGTT-------------------------------------------------------------TSCEEEEEEE
T ss_pred -CCc-ccCC-------------------------------------------------------------CeeEEEEEEC
Confidence 999 9999 9999999999
Q ss_pred cccHHHHHhhchhhCCcccccchhhh
Q psy6102 249 GFGVAREVSYVEAENDKPLVLNQMED 274 (426)
Q Consensus 249 Gldvl~~I~~l~~~~~~P~~~i~ilk 274 (426)
||+++++|+.+.+.+++|..++.|.+
T Consensus 141 G~dvv~~I~~~~t~~~~P~~~v~I~~ 166 (170)
T 1qng_A 141 GMNVVREMEKEGAKSGYVKRSVVITD 166 (170)
T ss_dssp CHHHHHHHHTTCCTTCCCSSCEEEEE
T ss_pred CHHHHHHHHhCCCCCCCCCCCeEEEe
Confidence 99999999999998888888776643
No 8
>2cmt_A Peptidyl-prolyl CIS-trans isomerase E; rotamase activity, rotamase, RNA-binding, cyclosporin, cyclophilin, beta-barrel; 1.50A {Schistosoma mansoni} PDB: 2ck1_A
Probab=100.00 E-value=3.3e-44 Score=320.77 Aligned_cols=166 Identities=42% Similarity=0.649 Sum_probs=148.9
Q ss_pred CCcccccCCCceEEEEEEECCeeeeeEEEEecCCCChHHHHHHHHhhhCCCCCCCCCcccc-ccCCcccccccccEEeeC
Q psy6102 1 MDKSICKEGNYIVFLDVSIGEEKVGRMVIELFKHIVPKTAENFRALCTGEYGKGKLGKALH-FTGSHFHRIIPQFMIQGG 79 (426)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~l~~~~~P~~~~nf~~l~~~~~~~~~~~k~~~-y~~~~f~rv~~~~~iq~G 79 (426)
|........+|+||||+++++|+.|+|+||||++.||+||+||++||++++ +| |+|+.||||+|+||||||
T Consensus 1 ~~~~~~~~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~~~--------g~~Y~g~~FhRvi~~f~iQgG 72 (172)
T 2cmt_A 1 MRTKKQKRNLPRVFFDIRIGNGDAGRIVMELRSDIVPRTAENFRALCTGER--------GFGYHNCCFHRVIPQFMCQGG 72 (172)
T ss_dssp --------CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTT--------SCSSTTCBEEEEETTTEEEEC
T ss_pred CCccCCCCCCCEEEEEEEECCeecceEEEEEcCCCCCHHHHHHHHHhccCC--------CceECCCEEEEEECCCEEEcC
Confidence 445556778999999999999999999999999999999999999998743 56 999999999999999999
Q ss_pred ccccCCCCCCccccCCCcCCccccccCCCCCCCCCCcchhhhhhhhhhcceeeeeeccccCCCCCCCCCCCccccceEEE
Q psy6102 80 DITNFNGTGGESIYGPCFEDENFKLKGIYPKNKYPGIYPSLVKAMFRMLTFTSMVCLFSLGSGLGLGLASTLVGSYQFSC 159 (426)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~sqF~i 159 (426)
|++.++|+||.|+||..|+||++.++|++ ||+ ||||+. | |+ +++|||||
T Consensus 73 d~~~~~G~gg~si~g~~f~dE~~~l~h~~-----~G~--------------lsmA~~---g-------p~--t~gSQFfI 121 (172)
T 2cmt_A 73 DFVKGDGTGGKSIYGRKFDDENFQLRHEG-----FGV--------------LSMANS---G-------PN--TNGSQFFI 121 (172)
T ss_dssp CTTTSSSSCCCBTTBSCBCCCCCCSCCCS-----TTE--------------EEECCS---S-------TT--CBCSCEEE
T ss_pred CccCCCCCCCCccCCCcccccccCcccCC-----ceE--------------EEEeeC---C-------CC--CcccEEEE
Confidence 99888999999999999999999999998 899 999999 8 99 99999999
Q ss_pred EeeccccccCchhhhhhhhHHHHHHHHhhhhhhhhhhhchhhhhHhhhcchHHHhhhccCCCCccchhHHHHHhhhcccc
Q psy6102 160 TVSFLNTFTNNCEIHLQRLNVKLRKIEADLSILEAKHYYNQGALEKKRGITEHKKKLETGRGKEISRKQYRDLVKKKKKK 239 (426)
Q Consensus 160 ~~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 239 (426)
|+. +++ |||+ +
T Consensus 122 t~~-------~~~-~LDg-------------------------------------------------------------~ 132 (172)
T 2cmt_A 122 CTT-------KCD-WLDG-------------------------------------------------------------K 132 (172)
T ss_dssp ESS-------CCG-GGTT-------------------------------------------------------------T
T ss_pred ECC-------CCC-ccCC-------------------------------------------------------------C
Confidence 999 999 9999 9
Q ss_pred cceechhhccccHHHHHhhchhhCCcccccchhhh
Q psy6102 240 NGIFGCVRQGFGVAREVSYVEAENDKPLVLNQMED 274 (426)
Q Consensus 240 ~~vFG~VieGldvl~~I~~l~~~~~~P~~~i~ilk 274 (426)
|++||+|++|++++++|+.+.+.+++|..++.|.+
T Consensus 133 ~tvFG~Vv~G~dvv~~I~~~~~~~~~P~~~v~I~~ 167 (172)
T 2cmt_A 133 HVVFGRVVDGQNVVKKMESVGSKSGKVKEPVIISR 167 (172)
T ss_dssp SCEEEEEEECHHHHHHGGGGCCTTCCCSSCEEEEE
T ss_pred eeEEEEEEcCHHHHHHHHhCCCCCCCCCCCEEEEE
Confidence 99999999999999999999888888888776643
No 9
>1mzw_A Cyclophilin H, U-snRNP-ASSOCIATED cyclophilin; cyclophilin, peptidyl-prolyl-CIS/trans isomerase, spliceosome, U4/U6-60K protein, WD protein; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1qoi_A
Probab=100.00 E-value=3e-44 Score=322.71 Aligned_cols=170 Identities=47% Similarity=0.741 Sum_probs=155.2
Q ss_pred cccccCCCceEEEEEEECCeeeeeEEEEecCCCChHHHHHHHHhhhCCCCCCCCCccccccCCcccccccccEEeeCccc
Q psy6102 3 KSICKEGNYIVFLDVSIGEEKVGRMVIELFKHIVPKTAENFRALCTGEYGKGKLGKALHFTGSHFHRIIPQFMIQGGDIT 82 (426)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~G~i~~~l~~~~~P~~~~nf~~l~~~~~~~~~~~k~~~y~~~~f~rv~~~~~iq~G~~~ 82 (426)
-....+.+++|||||++++|+.|+|+||||++.||+||+||++||++++|. .+|..+|+|+.||||+|+|||||||++
T Consensus 3 ~~~~~~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~--~g~~~~Y~g~~FhRvi~~f~iQgGd~~ 80 (177)
T 1mzw_A 3 VANSSPVNPVVFFDVSIGGQEVGRMKIELFADVVPKTAENFRQFCTGEFRK--DGVPIGYKGSTFHRVIKDFMIQGGDFV 80 (177)
T ss_dssp --CCCCCCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTCCEE--TTEECSSTTCBCCEEETTTEEEECCTT
T ss_pred ccccCCCCCEEEEEEEECCeeceeEEEEEcCCCCcHHHHHHHHHHhcccCC--cCccceECCCEEEEEECCCEEEcCCcc
Confidence 344567799999999999999999999999999999999999999987754 246678999999999999999999998
Q ss_pred cCCCCCCccccCCCcCCccccccCCCCCCCCCCcchhhhhhhhhhcceeeeeeccccCCCCCCCCCCCccccceEEEEee
Q psy6102 83 NFNGTGGESIYGPCFEDENFKLKGIYPKNKYPGIYPSLVKAMFRMLTFTSMVCLFSLGSGLGLGLASTLVGSYQFSCTVS 162 (426)
Q Consensus 83 ~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~sqF~i~~~ 162 (426)
.++|+||+|+||+.|+||++.++|++ ||+ ||||+. | |+ +++||||||+.
T Consensus 81 ~~~G~gg~si~g~~f~dE~~~l~h~~-----~G~--------------lsmAn~---g-------p~--tngSQFfIt~~ 129 (177)
T 1mzw_A 81 NGDGTGVASIYRGPFADENFKLRHSA-----PGL--------------LSMANS---G-------PS--TNGCQFFITCS 129 (177)
T ss_dssp TSSSCCCCCTTSSCBCCCCCCSCCCS-----TTE--------------EEECCS---S-------TT--CBCSCEEEESS
T ss_pred cCCCCCCCccCCCcccCcccccccCC-----CCE--------------EEEccC---C-------CC--CcceEEEEECC
Confidence 88999999999999999999999998 899 999999 8 99 99999999999
Q ss_pred ccccccCchhhhhhhhHHHHHHHHhhhhhhhhhhhchhhhhHhhhcchHHHhhhccCCCCccchhHHHHHhhhcccccce
Q psy6102 163 FLNTFTNNCEIHLQRLNVKLRKIEADLSILEAKHYYNQGALEKKRGITEHKKKLETGRGKEISRKQYRDLVKKKKKKNGI 242 (426)
Q Consensus 163 ~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v 242 (426)
+++ |||+ +|++
T Consensus 130 -------~~~-~LDg-------------------------------------------------------------~~~V 140 (177)
T 1mzw_A 130 -------KCD-WLDG-------------------------------------------------------------KHVV 140 (177)
T ss_dssp -------CCG-GGTT-------------------------------------------------------------TSCE
T ss_pred -------CCC-ccCC-------------------------------------------------------------CeeE
Confidence 999 9999 9999
Q ss_pred echhhccccHHHHHhhchh-hCCcccccchhhh
Q psy6102 243 FGCVRQGFGVAREVSYVEA-ENDKPLVLNQMED 274 (426)
Q Consensus 243 FG~VieGldvl~~I~~l~~-~~~~P~~~i~ilk 274 (426)
||+|++|++++++|+.+++ .+++|..++.|.+
T Consensus 141 FG~Vv~G~dvv~~I~~~~t~~~~~P~~~v~I~~ 173 (177)
T 1mzw_A 141 FGKIIDGLLVMRKIENVPTGPNNKPKLPVVISQ 173 (177)
T ss_dssp EEEEEECHHHHHHHHTSCBCGGGCBSSCEEEEE
T ss_pred EEEEeCCHHHHHHHHhCCcCCCCCCCCCEEEEe
Confidence 9999999999999999998 6788888776643
No 10
>2z6w_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin D; HET: BMT MLE CIT; 0.96A {Homo sapiens} SCOP: b.62.1.1 PDB: 3rcg_A* 3r49_A* 3r54_A 3r56_A* 3r57_A* 3r59_A* 3rcf_A* 3r4g_A* 3rci_X* 3rck_X* 3rcl_A* 3rd9_X* 3rda_X* 3rdb_A* 3rdc_A* 2bit_X 2biu_X 3qyu_A 3k0m_A 1ak4_A* ...
Probab=100.00 E-value=9.1e-44 Score=316.29 Aligned_cols=158 Identities=45% Similarity=0.739 Sum_probs=148.1
Q ss_pred CCceEEEEEEECCeeeeeEEEEecCCCChHHHHHHHHhhhCCCCCCCCCcccc-ccCCcccccccccEEeeCccccCCCC
Q psy6102 9 GNYIVFLDVSIGEEKVGRMVIELFKHIVPKTAENFRALCTGEYGKGKLGKALH-FTGSHFHRIIPQFMIQGGDITNFNGT 87 (426)
Q Consensus 9 ~~~~~~~~~~~~~~~~G~i~~~l~~~~~P~~~~nf~~l~~~~~~~~~~~k~~~-y~~~~f~rv~~~~~iq~G~~~~~~~~ 87 (426)
.+|+||||++|++|+.|+|+||||++.||+||+||++||+|+. +| |+|+.||||+|+|||||||++.++|+
T Consensus 2 ~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~--------g~~Y~g~~fhRvi~~f~iQgGd~~~~~g~ 73 (165)
T 2z6w_A 2 GNPLVYLDVDANGKPLGRVVLELKADVVPKTAENFRALCTGEK--------GFGYKGSTFHRVIPSFMCQAGDFTNHNGT 73 (165)
T ss_dssp CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTT--------SCCSTTCBEEEEETTTEEEECCTTTSSSS
T ss_pred CCCEEEEEEEECCEeeeEEEEEEeCCCCcHHHHHHHHHhccCC--------CccCcCCEEEEEECCCEEEeCCccCCCCC
Confidence 4899999999999999999999999999999999999998754 67 99999999999999999999888999
Q ss_pred CCccccCCCcCCccccccCCCCCCCCCCcchhhhhhhhhhcceeeeeeccccCCCCCCCCCCCccccceEEEEeeccccc
Q psy6102 88 GGESIYGPCFEDENFKLKGIYPKNKYPGIYPSLVKAMFRMLTFTSMVCLFSLGSGLGLGLASTLVGSYQFSCTVSFLNTF 167 (426)
Q Consensus 88 ~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~sqF~i~~~~~~~~ 167 (426)
||.|+||+.|+||++.++|.+ ||+ ||||+. | |+ +++||||||+.
T Consensus 74 gg~si~g~~f~dE~~~l~h~~-----~G~--------------lsmA~~---g-------p~--s~~SQFfI~~~----- 117 (165)
T 2z6w_A 74 GGKSIYGSRFPDENFTLKHVG-----PGV--------------LSMANA---G-------PN--TNGSQFFICTI----- 117 (165)
T ss_dssp CCCBTTBSCBCCCCCCSCCCS-----TTE--------------EEECCS---S-------TT--CBCSCEEEESS-----
T ss_pred CCCcccCCcccCcccccccCC-----CCE--------------EEEeeC---C-------CC--CcccEEEEEcC-----
Confidence 999999999999999999998 899 999999 8 99 99999999999
Q ss_pred cCchhhhhhhhHHHHHHHHhhhhhhhhhhhchhhhhHhhhcchHHHhhhccCCCCccchhHHHHHhhhcccccceechhh
Q psy6102 168 TNNCEIHLQRLNVKLRKIEADLSILEAKHYYNQGALEKKRGITEHKKKLETGRGKEISRKQYRDLVKKKKKKNGIFGCVR 247 (426)
Q Consensus 168 ~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~vFG~Vi 247 (426)
+++ |||+ +|++||+|+
T Consensus 118 --~~~-~Ldg-------------------------------------------------------------~~~vFG~Vv 133 (165)
T 2z6w_A 118 --KTD-WLDG-------------------------------------------------------------KHVVFGHVI 133 (165)
T ss_dssp --CCG-GGTT-------------------------------------------------------------TSCEEEEEE
T ss_pred --CCc-ccCC-------------------------------------------------------------CeeEEEEEE
Confidence 999 9999 999999999
Q ss_pred ccccHHHHHhhchhhCCcccccchhhh
Q psy6102 248 QGFGVAREVSYVEAENDKPLVLNQMED 274 (426)
Q Consensus 248 eGldvl~~I~~l~~~~~~P~~~i~ilk 274 (426)
+|++++++|+.+.+.+++|..++.|.+
T Consensus 134 ~G~dvv~~I~~~~~~~~~P~~~v~I~~ 160 (165)
T 2z6w_A 134 EGMDVVKKIESFGSKSGRTSKKIVITD 160 (165)
T ss_dssp ECHHHHHHHHHTCCTTSCCSSCEEEEE
T ss_pred cCHHHHHHHHhCCCCCCCCCCcEEEEE
Confidence 999999999999887788887776643
No 11
>2r99_A Peptidyl-prolyl CIS-trans isomerase E; CIS-trans isomerization, structural genomics consortium, SGC, alternative splicing, mRNA processing; 1.61A {Homo sapiens} SCOP: b.62.1.1 PDB: 3uch_A 1zmf_A
Probab=100.00 E-value=2.3e-43 Score=315.87 Aligned_cols=160 Identities=46% Similarity=0.719 Sum_probs=148.6
Q ss_pred cCCCceEEEEEEECCeeeeeEEEEecCCCChHHHHHHHHhhhCCCCCCCCCcccc-ccCCcccccccccEEeeCccccCC
Q psy6102 7 KEGNYIVFLDVSIGEEKVGRMVIELFKHIVPKTAENFRALCTGEYGKGKLGKALH-FTGSHFHRIIPQFMIQGGDITNFN 85 (426)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~G~i~~~l~~~~~P~~~~nf~~l~~~~~~~~~~~k~~~-y~~~~f~rv~~~~~iq~G~~~~~~ 85 (426)
...+++||||+++++|+.|+|+||||++.||+||+||++||+|+. +| |+|+.||||+|+|||||||++.++
T Consensus 8 ~~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~--------g~~Y~g~~FhRvi~~f~iQgGd~~~~~ 79 (173)
T 2r99_A 8 ARSNPQVYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRCLCTHEK--------GFGFKGSSFHRIIPQFMCQGGDFTNHN 79 (173)
T ss_dssp --CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTT--------SCCSTTCBEEEEETTTEEEECCTTTSS
T ss_pred ccCCCEEEEEEEECCccceeEEEEECCCCCcHHHHHHHHHhcccC--------CceecCCEEEEeeCCCEEEeCCcCCCC
Confidence 456899999999999999999999999999999999999998744 55 999999999999999999998889
Q ss_pred CCCCccccCCCcCCccccccCCCCCCCCCCcchhhhhhhhhhcceeeeeeccccCCCCCCCCCCCccccceEEEEeeccc
Q psy6102 86 GTGGESIYGPCFEDENFKLKGIYPKNKYPGIYPSLVKAMFRMLTFTSMVCLFSLGSGLGLGLASTLVGSYQFSCTVSFLN 165 (426)
Q Consensus 86 ~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~sqF~i~~~~~~ 165 (426)
|+||.|+||..|+||++.++|++ ||+ ||||+. | |+ +++||||||+.
T Consensus 80 g~gg~si~g~~f~dE~~~l~h~~-----~G~--------------lsmA~~---g-------p~--t~gSQFfIt~~--- 125 (173)
T 2r99_A 80 GTGGKSIYGKKFDDENFILKHTG-----PGL--------------LSMANS---G-------PN--TNGSQFFLTCD--- 125 (173)
T ss_dssp SSCCCBTTBSCBCCCCCCSCCCS-----SSE--------------EEECCS---S-------TT--CBCSCEEEESS---
T ss_pred CCCCCccCCCcccCcccCcccCC-----CcE--------------EEEccC---C-------CC--CcccEEEEECC---
Confidence 99999999999999999999998 899 999999 8 99 99999999999
Q ss_pred cccCchhhhhhhhHHHHHHHHhhhhhhhhhhhchhhhhHhhhcchHHHhhhccCCCCccchhHHHHHhhhcccccceech
Q psy6102 166 TFTNNCEIHLQRLNVKLRKIEADLSILEAKHYYNQGALEKKRGITEHKKKLETGRGKEISRKQYRDLVKKKKKKNGIFGC 245 (426)
Q Consensus 166 ~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~vFG~ 245 (426)
+++ |||+ +|++||+
T Consensus 126 ----~~~-~LDg-------------------------------------------------------------~~tVFG~ 139 (173)
T 2r99_A 126 ----KTD-WLDG-------------------------------------------------------------KHVVFGE 139 (173)
T ss_dssp ----CCG-GGTT-------------------------------------------------------------TSCEEEE
T ss_pred ----CCC-ccCC-------------------------------------------------------------CeeEEEE
Confidence 999 9999 9999999
Q ss_pred hhccccHHHHHhhchhhCCcccccchhhh
Q psy6102 246 VRQGFGVAREVSYVEAENDKPLVLNQMED 274 (426)
Q Consensus 246 VieGldvl~~I~~l~~~~~~P~~~i~ilk 274 (426)
|++||+++++|+.+.+.+++|...+.|.+
T Consensus 140 Vv~G~dvv~~I~~~~~~~~~P~~~v~I~~ 168 (173)
T 2r99_A 140 VTEGLDVLRQIEAQGSKDGKPKQKVIIAD 168 (173)
T ss_dssp EEECHHHHHHHHTTCCTTCCCSSCEEEEE
T ss_pred EEcCHHHHHHHHhCCCCCCCCCCCeEEEE
Confidence 99999999999999888788888776643
No 12
>1z81_A Cyclophilin; structural genomics, structural genomics consortium, SGC, isomerase; 2.80A {Plasmodium yoelii yoelii} SCOP: b.62.1.1
Probab=100.00 E-value=4.7e-43 Score=324.99 Aligned_cols=167 Identities=39% Similarity=0.691 Sum_probs=154.5
Q ss_pred ccCCCceEEEEEEECCeeeeeEEEEecCCCChHHHHHHHHhhhCCCCCCCCCccccccCCcccccccccEEeeCccccCC
Q psy6102 6 CKEGNYIVFLDVSIGEEKVGRMVIELFKHIVPKTAENFRALCTGEYGKGKLGKALHFTGSHFHRIIPQFMIQGGDITNFN 85 (426)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~G~i~~~l~~~~~P~~~~nf~~l~~~~~~~~~~~k~~~y~~~~f~rv~~~~~iq~G~~~~~~ 85 (426)
..+.+++|||||+|++++.|+|+||||++.||+||+||++||+++++.+ ++..||+|+.||||||+|||||||++.++
T Consensus 55 ~~~~~~~V~~disi~~t~~G~I~ieL~~d~aP~tv~NF~~L~~~~~g~~--g~~~~Y~gt~FHRVi~~FmiQgGD~~~g~ 132 (229)
T 1z81_A 55 TNPSNPVVFMDINLGNNFLGKFKFELFQNIVPKTSENFRQFCTGEYKVN--NLPVGYKNTIFHRVIKEFMIQGGDFINHN 132 (229)
T ss_dssp SSTTCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTCCBSS--SSBCSSTTEECCEEETTTEEEECCTTTSS
T ss_pred cCCCCcEEEEEEeECCeecccEEEEEcCCCCCHHHHHHHHHhhCCCCCc--CCCceECCCEEEEEeCCCEEEcCCCcCCC
Confidence 3557899999999999999999999999999999999999999887654 46679999999999999999999998889
Q ss_pred CCCCccccCCCcCCccccccCCCCCCCCCCcchhhhhhhhhhcceeeeeeccccCCCCCCCCCCCccccceEEEEeeccc
Q psy6102 86 GTGGESIYGPCFEDENFKLKGIYPKNKYPGIYPSLVKAMFRMLTFTSMVCLFSLGSGLGLGLASTLVGSYQFSCTVSFLN 165 (426)
Q Consensus 86 ~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~sqF~i~~~~~~ 165 (426)
|+||+|+||+.|+||++.++|++ ||+ |||||. | |+ +++||||||+.
T Consensus 133 G~Gg~siyg~~f~dE~~~l~h~~-----~G~--------------LsMAn~---g-------pn--tngSQFFIt~~--- 178 (229)
T 1z81_A 133 GSGSLSIYGEKFDDENFDIKHDK-----EGL--------------LSMANS---G-------PN--TNGCQFFITTK--- 178 (229)
T ss_dssp SCCCCBTTBSCCCCCCCCSCCCS-----TTE--------------EEECCS---S-------SS--CCCSCEEEESS---
T ss_pred CCCCCccCCCcccccccccccCC-----CcE--------------EEeccC---C-------CC--CcccEEEEECC---
Confidence 99999999999999999999998 899 999999 8 99 99999999999
Q ss_pred cccCchhhhhhhhHHHHHHHHhhhhhhhhhhhchhhhhHhhhcchHHHhhhccCCCCccchhHHHHHhhhcccccceech
Q psy6102 166 TFTNNCEIHLQRLNVKLRKIEADLSILEAKHYYNQGALEKKRGITEHKKKLETGRGKEISRKQYRDLVKKKKKKNGIFGC 245 (426)
Q Consensus 166 ~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~vFG~ 245 (426)
+++ |||+ +|++||+
T Consensus 179 ----~~~-~LDg-------------------------------------------------------------~~tVFG~ 192 (229)
T 1z81_A 179 ----KCE-WLDG-------------------------------------------------------------KNVVFGR 192 (229)
T ss_dssp ----CCG-GGBT-------------------------------------------------------------TBCEEEE
T ss_pred ----CCc-ccCC-------------------------------------------------------------CeeEEEE
Confidence 999 9999 9999999
Q ss_pred hh--ccccHHHHHhhchhhC--Ccccccchhhh
Q psy6102 246 VR--QGFGVAREVSYVEAEN--DKPLVLNQMED 274 (426)
Q Consensus 246 Vi--eGldvl~~I~~l~~~~--~~P~~~i~ilk 274 (426)
|+ +|++++++|+.+.+.. ++|..++.|.+
T Consensus 193 Vv~~eGmdVv~~I~~~~t~~~~~~P~~~V~I~~ 225 (229)
T 1z81_A 193 IIDNDSLLLLKKIENVSVTPYIYKPKIPINVVE 225 (229)
T ss_dssp ECSHHHHHHHHHHHHSCBCTTTCCBSSCEEEEE
T ss_pred EEecCcHHHHHHHHhCCCCCCCCCCCCCeEEEe
Confidence 99 9999999999999954 78888776644
No 13
>3pmp_A Cyclophilin A; peptidyl prolyl isomerase, isomerase-immunosuppressant compl; HET: BMT; 1.47A {Moniliophthora perniciosa} SCOP: b.62.1.1 PDB: 3o7t_A
Probab=100.00 E-value=6.2e-43 Score=311.01 Aligned_cols=158 Identities=42% Similarity=0.677 Sum_probs=148.6
Q ss_pred CCceEEEEEEECCeeeeeEEEEecCCCChHHHHHHHHhhhCCCCCCCCCcccc-ccCCcccccccccEEeeCccccCCCC
Q psy6102 9 GNYIVFLDVSIGEEKVGRMVIELFKHIVPKTAENFRALCTGEYGKGKLGKALH-FTGSHFHRIIPQFMIQGGDITNFNGT 87 (426)
Q Consensus 9 ~~~~~~~~~~~~~~~~G~i~~~l~~~~~P~~~~nf~~l~~~~~~~~~~~k~~~-y~~~~f~rv~~~~~iq~G~~~~~~~~ 87 (426)
.||+||||++|++|+.|+|+||||++.||+||+||++||+|+. +| |+|+.||||+|+|||||||++.++|+
T Consensus 1 ~~p~vf~di~i~~t~~G~i~ieL~~~~aP~t~~nF~~L~~g~~--------g~~Y~g~~fhRvi~~f~iQgGd~~~~~g~ 72 (164)
T 3pmp_A 1 AMANVFFNISINDKPEGRIVFKLYDEAVPKTAKNFRELATGQH--------GFGYKDSIFHRVIPQFMLQGGDFTRHNGT 72 (164)
T ss_dssp CCCCEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTT--------SCSSTTCBEEEEETTTEEEECCTTTSSSS
T ss_pred CCCEEEEEEEECCEEeeEEEEEEeCCCCcHHHHHHHHHhcccC--------CCcccCCEEEEEECCCeEEeCCCCCCCCC
Confidence 3799999999999999999999999999999999999999754 56 99999999999999999998778999
Q ss_pred CCccccCCCcCCccccccCCCCCCCCCCcchhhhhhhhhhcceeeeeeccccCCCCCCCCCCCccccceEEEEeeccccc
Q psy6102 88 GGESIYGPCFEDENFKLKGIYPKNKYPGIYPSLVKAMFRMLTFTSMVCLFSLGSGLGLGLASTLVGSYQFSCTVSFLNTF 167 (426)
Q Consensus 88 ~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~sqF~i~~~~~~~~ 167 (426)
|+.|+||.+|++|++.++|++ ||+ ||||+. | |+ +++||||||+.
T Consensus 73 gg~si~g~~~~dE~~~l~h~~-----~G~--------------lsma~~---g-------~~--t~~SQFfIt~~----- 116 (164)
T 3pmp_A 73 GGKSIYGEKFADENFQVKHTK-----PGL--------------LSMANA---G-------AN--TNGSQFFITTV----- 116 (164)
T ss_dssp CCCBTTBSCBCCCCCCSCCCS-----TTE--------------EEECBS---S-------TT--CBCSCEEEESS-----
T ss_pred CCcccCCccccccccccCcCC-----CcE--------------EEEeeC---C-------CC--CcccEEEEECC-----
Confidence 999999999999999999998 999 999999 8 99 99999999999
Q ss_pred cCchhhhhhhhHHHHHHHHhhhhhhhhhhhchhhhhHhhhcchHHHhhhccCCCCccchhHHHHHhhhcccccceechhh
Q psy6102 168 TNNCEIHLQRLNVKLRKIEADLSILEAKHYYNQGALEKKRGITEHKKKLETGRGKEISRKQYRDLVKKKKKKNGIFGCVR 247 (426)
Q Consensus 168 ~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~vFG~Vi 247 (426)
+++ |||+ +|++||+|+
T Consensus 117 --~~~-~Ld~-------------------------------------------------------------~~~vFG~Vv 132 (164)
T 3pmp_A 117 --PTS-WLDG-------------------------------------------------------------KHVVFGEVI 132 (164)
T ss_dssp --CCG-GGTT-------------------------------------------------------------TSCEEEEEE
T ss_pred --CCh-hhCC-------------------------------------------------------------CccEEEEEe
Confidence 999 9999 999999999
Q ss_pred ccccHHHHHhhchhhCCcccccchhhh
Q psy6102 248 QGFGVAREVSYVEAENDKPLVLNQMED 274 (426)
Q Consensus 248 eGldvl~~I~~l~~~~~~P~~~i~ilk 274 (426)
+|++++++|+.+.+.+++|..++.|.+
T Consensus 133 ~G~~vv~~I~~~~~~~~~P~~~v~I~~ 159 (164)
T 3pmp_A 133 EGLDIVRKVEGKGSASGKTNATIKITD 159 (164)
T ss_dssp ECHHHHHHHHTTCCTTCCCSSCEEEEE
T ss_pred CCHHHHHHHHhCCCCCCCcccCEEEEe
Confidence 999999999999988888887776644
No 14
>2haq_A Cyclophilin; rotamase, proline, isomerase, CIS-trans, protozoa, KAla-AZAR.; 1.97A {Leishmania donovani} PDB: 3eov_A* 3bt8_A
Probab=100.00 E-value=7e-43 Score=311.69 Aligned_cols=160 Identities=41% Similarity=0.646 Sum_probs=146.8
Q ss_pred ccCCCceEEEEEEECCeeeeeEEEEecCCCChHHHHHHHHhhhCCCCCCCCCcccc-ccCCcccccccccEEeeCccccC
Q psy6102 6 CKEGNYIVFLDVSIGEEKVGRMVIELFKHIVPKTAENFRALCTGEYGKGKLGKALH-FTGSHFHRIIPQFMIQGGDITNF 84 (426)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~G~i~~~l~~~~~P~~~~nf~~l~~~~~~~~~~~k~~~-y~~~~f~rv~~~~~iq~G~~~~~ 84 (426)
..+.+++||||++|++|+.|+|+||||++.||+||+||++||+|+. +| |+|+.||||+|+|||||||+..+
T Consensus 7 ~~~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~--------g~~Y~g~~FhRvi~~f~iQgGd~~~~ 78 (172)
T 2haq_A 7 EPEVTAKVYFDVMIDSEPLGRITIGLFGKDAPLTTENFRQLCTGEH--------GFGYKDSIFHRVIQNFMIQGGDFTNF 78 (172)
T ss_dssp CCCCCEEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTT--------SCCSTTCBCCEEETTTEEEECCTTTS
T ss_pred CCCCCCeEEEEEEECCEecceEEEEEeCCCCcHHHHHHHHHhccCC--------CcccCCCEEEEEECCCEEecCCccCC
Confidence 3567899999999999999999999999999999999999998744 56 99999999999999999998778
Q ss_pred CCCCCccccCCCcCCccccccCCCCCCCCCCcchhhhhhhhhhcceeeeeeccccCCCCCCCCCCCccccceEEEEeecc
Q psy6102 85 NGTGGESIYGPCFEDENFKLKGIYPKNKYPGIYPSLVKAMFRMLTFTSMVCLFSLGSGLGLGLASTLVGSYQFSCTVSFL 164 (426)
Q Consensus 85 ~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~sqF~i~~~~~ 164 (426)
+|+||+|+||++|+||++.++|. ||+ ||||+. | |+ +++||||||+.
T Consensus 79 ~g~gg~si~g~~f~dE~~~l~h~------~G~--------------lsmAn~---g-------p~--tngSQFfIt~~-- 124 (172)
T 2haq_A 79 DGTGGKSIYGEKFADENLNVKHF------VGA--------------LSMANA---G-------PN--TNGSQFFITTA-- 124 (172)
T ss_dssp SSSCCCCSSSSCBCCCCCCSCCC------TTE--------------EEECCS---S-------TT--CBCSCEEEESS--
T ss_pred CCCCCccccCCcccCcCCCcccC------ceE--------------EEEccC---C-------CC--CcccEEEEECC--
Confidence 99999999999999998888877 599 999999 8 99 99999999999
Q ss_pred ccccCchhhhhhhhHHHHHHHHhhhhhhhhhhhchhhhhHhhhcchHHHhhhccCCCCccchhHHHHHhhhcccccceec
Q psy6102 165 NTFTNNCEIHLQRLNVKLRKIEADLSILEAKHYYNQGALEKKRGITEHKKKLETGRGKEISRKQYRDLVKKKKKKNGIFG 244 (426)
Q Consensus 165 ~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~vFG 244 (426)
+++ +||+ +|++||
T Consensus 125 -----~~~-~LDg-------------------------------------------------------------~~~vFG 137 (172)
T 2haq_A 125 -----PTP-WLDG-------------------------------------------------------------RHVVFG 137 (172)
T ss_dssp -----CCG-GGTT-------------------------------------------------------------TSCEEE
T ss_pred -----CCC-ccCC-------------------------------------------------------------CEeEEE
Confidence 999 9999 999999
Q ss_pred hhhccccHHHHHhhchhh-CCcccccchhhh
Q psy6102 245 CVRQGFGVAREVSYVEAE-NDKPLVLNQMED 274 (426)
Q Consensus 245 ~VieGldvl~~I~~l~~~-~~~P~~~i~ilk 274 (426)
+|++|++++++|+.+++. .++|..++.|.+
T Consensus 138 ~Vv~G~dvv~~I~~~~t~~~~~P~~~v~I~~ 168 (172)
T 2haq_A 138 KVLDGMDVVLRIEKTKTNSHDRPVKPVKIVA 168 (172)
T ss_dssp EEEECHHHHHHHHTSCBCGGGCBSSCEEEEE
T ss_pred EEeCCHHHHHHHHhCCcCCCCcCCCCeEEEE
Confidence 999999999999999984 458887766543
No 15
>3rdd_A Peptidyl-prolyl CIS-trans isomerase A; beta barrel, cytosolic, inhibito isomerase-isomerase inhibitor complex; HET: EA4; 2.14A {Homo sapiens}
Probab=100.00 E-value=2.8e-42 Score=311.59 Aligned_cols=161 Identities=47% Similarity=0.720 Sum_probs=149.1
Q ss_pred cCCCceEEEEEEECCeeeeeEEEEecCCCChHHHHHHHHhhhCCCCCCCCCccccccCCcccccccccEEeeCccccCCC
Q psy6102 7 KEGNYIVFLDVSIGEEKVGRMVIELFKHIVPKTAENFRALCTGEYGKGKLGKALHFTGSHFHRIIPQFMIQGGDITNFNG 86 (426)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~G~i~~~l~~~~~P~~~~nf~~l~~~~~~~~~~~k~~~y~~~~f~rv~~~~~iq~G~~~~~~~ 86 (426)
...+|+|||||+|++++.|+|+||||++.||+||+||++||++++|.+ |+|+.||||+|+|||||||++.++|
T Consensus 19 ~~~~p~v~~di~i~~~~~G~I~ieL~~~~aP~t~~NF~~L~~~~~g~~-------Y~g~~FhRvi~~f~iQgGd~~~~~g 91 (184)
T 3rdd_A 19 GMVNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNG 91 (184)
T ss_dssp --CCCEEEEEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHHTTTSCS-------STTCBCCEEETTTEEEECCTTTSSS
T ss_pred cCCCCEEEEEEeECCEeeeEEEEEEeCCCCcHHHHHHHHHhccCcCcc-------cCCCEEEEccCCcEEEeCCCCCCCC
Confidence 567899999999999999999999999999999999999999865333 9999999999999999999888899
Q ss_pred CCCccccCCCcCCccccccCCCCCCCCCCcchhhhhhhhhhcceeeeeeccccCCCCCCCCCCCccccceEEEEeecccc
Q psy6102 87 TGGESIYGPCFEDENFKLKGIYPKNKYPGIYPSLVKAMFRMLTFTSMVCLFSLGSGLGLGLASTLVGSYQFSCTVSFLNT 166 (426)
Q Consensus 87 ~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~sqF~i~~~~~~~ 166 (426)
+|+.+++|..|++|++.++|++ ||+ ||||+. | |+ +++||||||++
T Consensus 92 ~gg~si~g~~~~de~~~l~h~~-----~G~--------------lsmA~~---g-------p~--s~gSQFfIt~~---- 136 (184)
T 3rdd_A 92 TGGKSIYGEKFEDENFILKHTG-----PGI--------------LSMANA---G-------PN--TNGSQFFICTA---- 136 (184)
T ss_dssp SCCCBTTBSCBCCCCCCSCCCS-----TTE--------------EEECCS---S-------TT--CBSSCEEEESS----
T ss_pred CCCcccCCCcccCcccccccCC-----CcE--------------EEEEeC---C-------CC--CcccEEEEEeC----
Confidence 9999999999999999999998 899 999999 8 99 99999999999
Q ss_pred ccCchhhhhhhhHHHHHHHHhhhhhhhhhhhchhhhhHhhhcchHHHhhhccCCCCccchhHHHHHhhhcccccceechh
Q psy6102 167 FTNNCEIHLQRLNVKLRKIEADLSILEAKHYYNQGALEKKRGITEHKKKLETGRGKEISRKQYRDLVKKKKKKNGIFGCV 246 (426)
Q Consensus 167 ~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~vFG~V 246 (426)
+++ +||+ +|++||+|
T Consensus 137 ---~~~-~LDg-------------------------------------------------------------~~tVFG~V 151 (184)
T 3rdd_A 137 ---KTE-WLDG-------------------------------------------------------------KHVVFGKV 151 (184)
T ss_dssp ---CCG-GGTT-------------------------------------------------------------TSCEEEEE
T ss_pred ---Cch-hhCC-------------------------------------------------------------CceEEEEE
Confidence 999 9999 99999999
Q ss_pred hccccHHHHHhhchhhCCcccccchhhh
Q psy6102 247 RQGFGVAREVSYVEAENDKPLVLNQMED 274 (426)
Q Consensus 247 ieGldvl~~I~~l~~~~~~P~~~i~ilk 274 (426)
++|++++++|+.+.+.+++|...+.|.+
T Consensus 152 v~G~dvv~~I~~~~~~~g~P~~~v~I~~ 179 (184)
T 3rdd_A 152 KEGMNIVEAMERFGSRNGKTSKKITIAD 179 (184)
T ss_dssp EECHHHHHHHHTTCCTTSCCSSCEEEEE
T ss_pred ecCHHHHHHHHhcCCCCCCCcCCeEEEe
Confidence 9999999999999888888888776643
No 16
>3ich_A Peptidyl-prolyl CIS-trans isomerase B; beta sandwich, cyclosporin, endoplasmic reticulum, glycoprot isomerase, rotamase; 1.20A {Homo sapiens} PDB: 3ici_A* 1cyn_A* 2esl_A* 2rmc_A* 1h0p_A 1xo7_A 1xq7_A*
Probab=100.00 E-value=1.8e-42 Score=313.61 Aligned_cols=160 Identities=45% Similarity=0.691 Sum_probs=147.3
Q ss_pred cCCCceEEEEEEECCeeeeeEEEEecCCCChHHHHHHHHhhhCCCCCCCCCcccc-ccCCcccccccccEEeeCccccCC
Q psy6102 7 KEGNYIVFLDVSIGEEKVGRMVIELFKHIVPKTAENFRALCTGEYGKGKLGKALH-FTGSHFHRIIPQFMIQGGDITNFN 85 (426)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~G~i~~~l~~~~~P~~~~nf~~l~~~~~~~~~~~k~~~-y~~~~f~rv~~~~~iq~G~~~~~~ 85 (426)
...+++|||||++++|+.|+|+||||++.||+||+||++||+|+. +| |+|+.||||||+|||||||+..++
T Consensus 12 p~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~--------g~~Y~g~~FhRvi~~f~iQgGd~~~~~ 83 (188)
T 3ich_A 12 PKVTVKVYFDLRIGDEDVGRVIFGLFGKTVPKTVDNFVALATGEK--------GFGYKNSKFHRVIKDFMIQGGDFTRGD 83 (188)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTT--------SCSSTTCBCCEEETTTEEEECCTTTSS
T ss_pred CCcCCeEEEEEEECCEeceeEEEEEcCCCCcHHHHHHHHHhcccC--------CccccCCEEEEEECCCEEEcCCccCCC
Confidence 344789999999999999999999999999999999999998754 56 999999999999999999977789
Q ss_pred CCCCccccCCCcCCccccccCCCCCCCCCCcchhhhhhhhhhcceeeeeeccccCCCCCCCCCCCccccceEEEEeeccc
Q psy6102 86 GTGGESIYGPCFEDENFKLKGIYPKNKYPGIYPSLVKAMFRMLTFTSMVCLFSLGSGLGLGLASTLVGSYQFSCTVSFLN 165 (426)
Q Consensus 86 ~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~sqF~i~~~~~~ 165 (426)
|+||.|+||+.|+||++.++|++ +|+ |||||. | |+ +++||||||+.
T Consensus 84 g~gg~si~g~~f~dE~~~l~h~~-----~G~--------------lsmAn~---g-------p~--tngSQFfIt~~--- 129 (188)
T 3ich_A 84 GTGGKSIYGERFPDENFKLKHYG-----PGW--------------VSMANA---G-------KD--TNGSQFFITTV--- 129 (188)
T ss_dssp SSCCCBTTBSCBCCCCCCSCCCS-----TTE--------------EEECCS---S-------TT--CBCSCEEEESS---
T ss_pred CCCCccccCCcccccccCcccCC-----CeE--------------EEEccC---C-------CC--CcccEEEEECC---
Confidence 99999999999999999999998 899 999999 8 99 99999999999
Q ss_pred cccCchhhhhhhhHHHHHHHHhhhhhhhhhhhchhhhhHhhhcchHHHhhhccCCCCccchhHHHHHhhhcccccceech
Q psy6102 166 TFTNNCEIHLQRLNVKLRKIEADLSILEAKHYYNQGALEKKRGITEHKKKLETGRGKEISRKQYRDLVKKKKKKNGIFGC 245 (426)
Q Consensus 166 ~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~vFG~ 245 (426)
+++ |||+ +|++||+
T Consensus 130 ----~~~-~LDg-------------------------------------------------------------~~tVFG~ 143 (188)
T 3ich_A 130 ----KTA-WLDG-------------------------------------------------------------KHVVFGK 143 (188)
T ss_dssp ----CCG-GGTT-------------------------------------------------------------TSCEEEE
T ss_pred ----CCc-ccCC-------------------------------------------------------------CeeEEEE
Confidence 999 9999 9999999
Q ss_pred hhccccHHHHHhhchhh-CCcccccchhhh
Q psy6102 246 VRQGFGVAREVSYVEAE-NDKPLVLNQMED 274 (426)
Q Consensus 246 VieGldvl~~I~~l~~~-~~~P~~~i~ilk 274 (426)
|++||+++++|+.+.+. .++|...+.|.+
T Consensus 144 Vv~G~dvv~~I~~~~~~~~~~P~~~v~I~~ 173 (188)
T 3ich_A 144 VLEGMEVVRKVESTKTDSRDKPLKDVIIAD 173 (188)
T ss_dssp EEECHHHHHHHHTSCBCTTSCBSSCEEEEE
T ss_pred EeCCHHHHHHHHhCCcCCCCeECCCEEEEE
Confidence 99999999999999984 457877666543
No 17
>3k2c_A Peptidyl-prolyl CIS-trans isomerase; ssgcid, NIH, niaid, SBRI, UW, decode, cytoplasm, rotamase, structural genomics; HET: PG5; 1.95A {Encephalitozoon cuniculi}
Probab=100.00 E-value=3.9e-42 Score=312.68 Aligned_cols=164 Identities=44% Similarity=0.675 Sum_probs=150.5
Q ss_pred cccccCCCceEEEEEEECCeeeeeEEEEecCCCChHHHHHHHHhhhCCCCCCCCCcccc-ccCCcccccccccEEeeCcc
Q psy6102 3 KSICKEGNYIVFLDVSIGEEKVGRMVIELFKHIVPKTAENFRALCTGEYGKGKLGKALH-FTGSHFHRIIPQFMIQGGDI 81 (426)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~G~i~~~l~~~~~P~~~~nf~~l~~~~~~~~~~~k~~~-y~~~~f~rv~~~~~iq~G~~ 81 (426)
.++....+|+|||||++++|+.|+|+||||++.||+||+||++||+|+. +| |+|+.||||+|+|||||||+
T Consensus 20 ~~~~~~~~p~v~~di~i~~t~~G~I~ieL~~~~aP~tv~NF~~L~~g~~--------g~~Y~g~~FhRvi~~f~iQgGd~ 91 (193)
T 3k2c_A 20 GSMAKEASGNVYFDVYANEESLGRIVMKLEDDIVPKTAKNFRTLCERPK--------GEGYKGSTFHRIIPGFMVQGGDY 91 (193)
T ss_dssp CCCC--CTTCEEEEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHHSCT--------TSSSTTCBEEEEETTTEEEECCT
T ss_pred ccccccCCCEEEEEEeECCEEeeEEEEEEcCCCChHHHHHHHHHhcccc--------CCcccCCEEEEEeCCCEEEeCCC
Confidence 3566788999999999999999999999999999999999999999755 45 99999999999999999998
Q ss_pred ccCCCCCCccccCCCcCCccccccCCCCCCCCCCcchhhhhhhhhhcceeeeeeccccCCCCCCCCCCCccccceEEEEe
Q psy6102 82 TNFNGTGGESIYGPCFEDENFKLKGIYPKNKYPGIYPSLVKAMFRMLTFTSMVCLFSLGSGLGLGLASTLVGSYQFSCTV 161 (426)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~sqF~i~~ 161 (426)
+.++|+|+.|+||..|++|++.++|+. ||+ ||||+. | |+ +++||||||+
T Consensus 92 ~~~~g~gg~si~g~~f~dE~~~l~h~~-----~G~--------------lsmAn~---g-------p~--t~gSQFFIt~ 140 (193)
T 3k2c_A 92 TAHNGTGGRSIYGEKFPDENFELKHTK-----EGI--------------LSMANC---G-------AH--TNGSQFFITL 140 (193)
T ss_dssp TTSSSSCCCCTTSSCBCCCCCCSCCCS-----TTE--------------EEECCS---S-------TT--CBCSCEEEES
T ss_pred CCCCCcCCcccCCCcccccccccccCC-----CcE--------------EEEEeC---C-------CC--CCccEEEEEC
Confidence 888999999999999999999999998 999 999999 8 99 9999999999
Q ss_pred eccccccCchhhhhhhhHHHHHHHHhhhhhhhhhhhchhhhhHhhhcchHHHhhhccCCCCccchhHHHHHhhhcccccc
Q psy6102 162 SFLNTFTNNCEIHLQRLNVKLRKIEADLSILEAKHYYNQGALEKKRGITEHKKKLETGRGKEISRKQYRDLVKKKKKKNG 241 (426)
Q Consensus 162 ~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 241 (426)
+ +++ +||+ +|+
T Consensus 141 ~-------~~~-~LDg-------------------------------------------------------------~~t 151 (193)
T 3k2c_A 141 G-------KTQ-WLDE-------------------------------------------------------------KHV 151 (193)
T ss_dssp S-------CCG-GGTT-------------------------------------------------------------TSC
T ss_pred C-------CCc-ccCC-------------------------------------------------------------Ccc
Confidence 9 999 9999 999
Q ss_pred eechhhccccHHHHHhhchhhCCccc--ccchhhh
Q psy6102 242 IFGCVRQGFGVAREVSYVEAENDKPL--VLNQMED 274 (426)
Q Consensus 242 vFG~VieGldvl~~I~~l~~~~~~P~--~~i~ilk 274 (426)
+||+|++|++++++|+.+.+++++|. ..+.|.+
T Consensus 152 VFG~Vv~Gmdvv~~I~~~~t~~g~P~~~~~v~I~~ 186 (193)
T 3k2c_A 152 VFGEVVEGMDVVHKIAKYGSESGQVKKGYRIEIRD 186 (193)
T ss_dssp EEEEEEECHHHHHHHHTTCCTTCCCCTTCCEEEEE
T ss_pred EEEEEeCCHHHHHHHHhcCCCCCcCccCccEEEEE
Confidence 99999999999999999999888888 6665543
No 18
>4fru_A Cyclophilin B, peptidyl-prolyl CIS-trans isomerase; cyclophilin-type ppiase, peptidyl-prolyl CIS-trans isomerase chaperone, foldase; HET: ME2 PEG; 1.10A {Equus caballus} PDB: 4frv_A* 3ich_A 3ici_A* 1cyn_A* 2esl_A* 2rmc_A* 1h0p_A 1xo7_A 1xq7_A*
Probab=100.00 E-value=8e-42 Score=309.50 Aligned_cols=161 Identities=46% Similarity=0.720 Sum_probs=149.1
Q ss_pred cCCCceEEEEEEECCeeeeeEEEEecCCCChHHHHHHHHhhhCCCCCCCCCccccccCCcccccccccEEeeCccccCCC
Q psy6102 7 KEGNYIVFLDVSIGEEKVGRMVIELFKHIVPKTAENFRALCTGEYGKGKLGKALHFTGSHFHRIIPQFMIQGGDITNFNG 86 (426)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~G~i~~~l~~~~~P~~~~nf~~l~~~~~~~~~~~k~~~y~~~~f~rv~~~~~iq~G~~~~~~~ 86 (426)
...+++|||||+|++++.|+|+||||++.||+||+||++||++++| .+|+|+.||||+|+|||||||++.++|
T Consensus 9 p~~~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g-------~~Y~g~~FhRvi~~f~iQgGd~~~~~g 81 (185)
T 4fru_A 9 PKVTVKVYFDLRIGDEDIGRVVIGLFGKTVPKTVDNFVALATGEKG-------FGYKDSKFHRVIKDFMIQGGDFTRGDG 81 (185)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHHTTTS-------CCSTTCBCCEEETTTEEEECCTTTSSS
T ss_pred CCcCcEEEEEEEECCEecceEEEEEeCCCCcHHHHHHHHHHhcCCC-------CeEcCCEEEEeeCCCeEEECCCCCCCC
Confidence 4568999999999999999999999999999999999999987542 269999999999999999999998999
Q ss_pred CCCccccCCCcCCccccccCCCCCCCCCCcchhhhhhhhhhcceeeeeeccccCCCCCCCCCCCccccceEEEEeecccc
Q psy6102 87 TGGESIYGPCFEDENFKLKGIYPKNKYPGIYPSLVKAMFRMLTFTSMVCLFSLGSGLGLGLASTLVGSYQFSCTVSFLNT 166 (426)
Q Consensus 87 ~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~sqF~i~~~~~~~ 166 (426)
+||.|++|..|++|++.++|+. ||+ |||||. | |+ +++||||||+.
T Consensus 82 ~gg~si~g~~f~de~~~~~h~~-----~G~--------------lsma~~---g-------p~--t~~SQFfI~~~---- 126 (185)
T 4fru_A 82 TGGKSIYGERFPDENFKLKHYG-----PGW--------------VSMANA---G-------KD--TNGSQFFITTV---- 126 (185)
T ss_dssp SCCCBTTBSCBCCCCCCSCCCS-----TTE--------------EEECCS---S-------TT--CBCSCEEEESS----
T ss_pred CCCccccCCccCccccccCcCC-----CeE--------------EEEeeC---C-------CC--CcceEEEEEeC----
Confidence 9999999999999999999998 999 999999 8 99 99999999999
Q ss_pred ccCchhhhhhhhHHHHHHHHhhhhhhhhhhhchhhhhHhhhcchHHHhhhccCCCCccchhHHHHHhhhcccccceechh
Q psy6102 167 FTNNCEIHLQRLNVKLRKIEADLSILEAKHYYNQGALEKKRGITEHKKKLETGRGKEISRKQYRDLVKKKKKKNGIFGCV 246 (426)
Q Consensus 167 ~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~vFG~V 246 (426)
+++ |||+ +|++||+|
T Consensus 127 ---~~~-~Ld~-------------------------------------------------------------~~~vFG~V 141 (185)
T 4fru_A 127 ---KTA-WLDG-------------------------------------------------------------KHVVFGKV 141 (185)
T ss_dssp ---CCG-GGTT-------------------------------------------------------------TSCEEEEE
T ss_pred ---CCc-ccCC-------------------------------------------------------------CccEEEEE
Confidence 999 9999 99999999
Q ss_pred hccccHHHHHhhchhh-CCcccccchhhh
Q psy6102 247 RQGFGVAREVSYVEAE-NDKPLVLNQMED 274 (426)
Q Consensus 247 ieGldvl~~I~~l~~~-~~~P~~~i~ilk 274 (426)
++||+++++|+.+.+. +++|...+.|.+
T Consensus 142 v~G~dvv~~I~~~~t~~~~~P~~~v~I~~ 170 (185)
T 4fru_A 142 LEGMEVVRKVETTKTDGRDKPLKDVTIAD 170 (185)
T ss_dssp EECHHHHHHHHTSCBCTTSCBSSCEEEEE
T ss_pred eCCHHHHHHHHhCCCCCCCcCCCCEEEEE
Confidence 9999999999999984 578888776654
No 19
>2c3b_A Ppiase, cyclophilin; isomerase, 3D domain swapping, misfolding, Asp F 11, allergen, rotamase; 1.85A {Aspergillus fumigatus} SCOP: b.62.1.1
Probab=100.00 E-value=3.2e-41 Score=301.65 Aligned_cols=155 Identities=43% Similarity=0.650 Sum_probs=113.3
Q ss_pred eEEEEEEEC--C---eeeeeEEEEecCCCChHHHHHHHHhhhCCCCCCCCCcccc-ccCCcccccccccEEeeCccccCC
Q psy6102 12 IVFLDVSIG--E---EKVGRMVIELFKHIVPKTAENFRALCTGEYGKGKLGKALH-FTGSHFHRIIPQFMIQGGDITNFN 85 (426)
Q Consensus 12 ~~~~~~~~~--~---~~~G~i~~~l~~~~~P~~~~nf~~l~~~~~~~~~~~k~~~-y~~~~f~rv~~~~~iq~G~~~~~~ 85 (426)
+||||++|+ + |+.|+|+||||++.||+||+||++||+|++ +| |+|+.||||+|+|||||||+..++
T Consensus 4 ~vf~di~i~~~~~~~T~~G~i~ieL~~~~aP~t~~NF~~L~~g~~--------g~~Y~g~~fhRvi~~f~iQgGd~~~~~ 75 (172)
T 2c3b_A 4 QVFFDVEYAPVGTAETKVGRIVFNLFDKDVPKTAKNFRELCKRPA--------GEGYRESTFHRIIPNFMIQGGDFTRGN 75 (172)
T ss_dssp CEEEEEEECCTTCSCCEEEEEEEEECTTTSHHHHHHHHHHHHSCT--------TTSSTTCBCCEEETTTEEEECC-----
T ss_pred EEEEEEEeCCCCceecccccEEEEEcCCCCcHHHHHHHHHhccCC--------CcccCCCEEEEEeCCCEEEeCCcCCCC
Confidence 899999998 6 555999999999999999999999999755 45 999999999999999999976789
Q ss_pred CCCCccccCCCcCCccccccCCCCCCCCCCcchhhhhhhhhhcceeeeeeccccCCCCCCCCCCCccccceEEEEeeccc
Q psy6102 86 GTGGESIYGPCFEDENFKLKGIYPKNKYPGIYPSLVKAMFRMLTFTSMVCLFSLGSGLGLGLASTLVGSYQFSCTVSFLN 165 (426)
Q Consensus 86 ~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~sqF~i~~~~~~ 165 (426)
|+||+|+||++|+||++.++|++ ||+ ||||+. | |+ +++||||||+.
T Consensus 76 g~gg~si~g~~f~dE~~~~~h~~-----~G~--------------lsmA~~---g-------p~--t~gSQFfIt~~--- 121 (172)
T 2c3b_A 76 GTGGRSIYGDKFADENFSRKHDK-----KGI--------------LSMANA---G-------PN--TNGSQFFITTA--- 121 (172)
T ss_dssp -----------------CHHHHH-----TCE--------------EEEC---------------------CEEEECS---
T ss_pred CCCCcccCCCcccCcccccccCC-----CeE--------------EEEeeC---C-------CC--CcccEEEEECC---
Confidence 99999999999999998999998 899 999999 8 99 99999999999
Q ss_pred cccCchhhhhhhhHHHHHHHHhhhhhhhhhhhchhhhhHhhhcchHHHhhhccCCCCccchhHHHHHhhhcccccceech
Q psy6102 166 TFTNNCEIHLQRLNVKLRKIEADLSILEAKHYYNQGALEKKRGITEHKKKLETGRGKEISRKQYRDLVKKKKKKNGIFGC 245 (426)
Q Consensus 166 ~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~vFG~ 245 (426)
+++ |||+ +|++||+
T Consensus 122 ----~~~-~LDg-------------------------------------------------------------~~tvFG~ 135 (172)
T 2c3b_A 122 ----VTS-WLDG-------------------------------------------------------------KHVVFGE 135 (172)
T ss_dssp ----CCT-TCCS-------------------------------------------------------------CCEEEEE
T ss_pred ----CCC-ccCC-------------------------------------------------------------CeeEEEE
Confidence 999 9999 9999999
Q ss_pred hhc--cccHHHHHhhchhhCC--cccccchhhh
Q psy6102 246 VRQ--GFGVAREVSYVEAEND--KPLVLNQMED 274 (426)
Q Consensus 246 Vie--Gldvl~~I~~l~~~~~--~P~~~i~ilk 274 (426)
|++ |++++++|+.+.+..+ +|..++.|.+
T Consensus 136 Vv~~~G~dvv~~I~~~~t~~~~~~P~~~v~I~~ 168 (172)
T 2c3b_A 136 VADEKSYSVVKEIEALGSSSGSVRSNTRPKIVN 168 (172)
T ss_dssp ECSHHHHHHHHHHHTTCCTTSCCCSSSCCEEEE
T ss_pred EEecCCHHHHHHHHhCCCCCCCccCCCCeEEEe
Confidence 999 9999999999988654 7887776643
No 20
>2ose_A Probable peptidyl-prolyl CIS-trans isomerase; cyclophilin; 2.04A {Mimivirus}
Probab=100.00 E-value=1.9e-40 Score=309.75 Aligned_cols=168 Identities=24% Similarity=0.386 Sum_probs=141.5
Q ss_pred cccCCCceEEEEEEECCeeeeeEEEEecCCCChHHHHHHHHhhhCCCCCCCC---C----ccc--c-ccCCccccccccc
Q psy6102 5 ICKEGNYIVFLDVSIGEEKVGRMVIELFKHIVPKTAENFRALCTGEYGKGKL---G----KAL--H-FTGSHFHRIIPQF 74 (426)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~G~i~~~l~~~~~P~~~~nf~~l~~~~~~~~~~---~----k~~--~-y~~~~f~rv~~~~ 74 (426)
.....+++||||++|++|+.|+|+||||++.||+||+||++||+|++.+-.. + +.| | |+|+.||||||+|
T Consensus 9 p~~~~~p~v~~di~i~~t~~G~I~ieL~~d~aP~tv~NF~~L~~g~~~~~~p~~~~~~~~~~G~~~~Y~gt~FHRVi~~F 88 (234)
T 2ose_A 9 PNSGKNPRVYMDIVLNNEIIGRLQIKLFRDAFPAGVENFVQLTNGKTYRVNSNGTGKYKYNRHINRTYEGCKFHNVLHNN 88 (234)
T ss_dssp CCCCSSCEEEEEEEETTEEEEEEEEEECGGGCHHHHHHHHHHHHTCCCC---------------CCCSTTCBCCEEETTT
T ss_pred CcCCCCCEEEEEEEECCcccceEEEEEcCCCCcHHHHHHHHHhcCCccccccccccccccccCCceEECCcEEEEEECCC
Confidence 3456789999999999999999999999999999999999999986221100 0 114 6 9999999999999
Q ss_pred EEeeCccccCCCCCCccccCCC-----cCCccccccCCCCCCCCCCcchhhhhhhhhhcceeeeee----ccccCCCCCC
Q psy6102 75 MIQGGDITNFNGTGGESIYGPC-----FEDENFKLKGIYPKNKYPGIYPSLVKAMFRMLTFTSMVC----LFSLGSGLGL 145 (426)
Q Consensus 75 ~iq~G~~~~~~~~~~~~~~~~~-----~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~----~~~~~~~~~~ 145 (426)
||||||+..++|+||+|+||+. |+ .+.++|++ +|+ ||||| . |
T Consensus 89 miQgGd~~~g~G~Gg~siyg~~~~p~~f~--~~~l~h~~-----~G~--------------lsMAn~~~~~---g----- 139 (234)
T 2ose_A 89 YIVSGDIYNSNGSSAGTVYCDEPIPPVFG--DYFYPHES-----KGL--------------LSLVPYTDES---G----- 139 (234)
T ss_dssp EEEECCCC----CCCCCTTTTCCBCCCCC--SCCCCSCS-----TTE--------------EEECCEECTT---S-----
T ss_pred EEEcCCccCCCCCCCccccCCccCccccc--CcCccCCC-----CCE--------------EEEecccccC---C-----
Confidence 9999998778999999999988 77 46888988 899 99999 7 7
Q ss_pred CCCCCccccceEEEEeeccccccCc------hhhhhhhhHHHHHHHHhhhhhhhhhhhchhhhhHhhhcchHHHhhhccC
Q psy6102 146 GLASTLVGSYQFSCTVSFLNTFTNN------CEIHLQRLNVKLRKIEADLSILEAKHYYNQGALEKKRGITEHKKKLETG 219 (426)
Q Consensus 146 ~~~~~~~~~sqF~i~~~~~~~~~~~------~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (426)
|+ ++|||||||+. + ++ |||+
T Consensus 140 --pn--tngSQFFIt~~-------~~~~~~g~p-~LDg------------------------------------------ 165 (234)
T 2ose_A 140 --NR--YYDSTFMITLD-------DIRPSNVLD-ELDR------------------------------------------ 165 (234)
T ss_dssp --CE--EBCSCEEEESS-------CCCTTSSGG-GSCT------------------------------------------
T ss_pred --CC--CccceEEEEec-------CccccCCCc-ccCC------------------------------------------
Confidence 89 99999999999 7 89 9999
Q ss_pred CCCccchhHHHHHhhhcccccceechhhccccHHHHHhhchhhC-Ccccccchhhh
Q psy6102 220 RGKEISRKQYRDLVKKKKKKNGIFGCVRQGFGVAREVSYVEAEN-DKPLVLNQMED 274 (426)
Q Consensus 220 ~g~~~~~~~~~~~~~~~~~~~~vFG~VieGldvl~~I~~l~~~~-~~P~~~i~ilk 274 (426)
+|++||+|++||+++++|+.+.+.. ++|...+.|.+
T Consensus 166 -------------------~~tVFG~Vv~GmdVv~~I~~~~t~~~~~P~~~V~I~~ 202 (234)
T 2ose_A 166 -------------------DQVVIGQVYGGLDVLDKINSMIKPYAGRKYPTFSIGK 202 (234)
T ss_dssp -------------------TSEEEEEEEECHHHHHHHHHHTCCCTTCCCCCEEEEE
T ss_pred -------------------CeeEEEEEeCCHHHHHHHHhCCcCCCCCccCCEEEEE
Confidence 9999999999999999999999854 88888776644
No 21
>2fu0_A Cyclophilin, putative; PFE0505W, cyclosporin-binding domain, structura genomics, structural genomics consortium, SGC, unknown FUNC; 1.80A {Plasmodium falciparum} SCOP: b.62.1.1
Probab=100.00 E-value=2.2e-39 Score=286.49 Aligned_cols=148 Identities=34% Similarity=0.505 Sum_probs=136.1
Q ss_pred CceEEEEEEECCeeeeeEEEEecCCCChHHHHHHHHhhhCCCCCCCCCccccccCCcccccccccEEeeCccccCCCCCC
Q psy6102 10 NYIVFLDVSIGEEKVGRMVIELFKHIVPKTAENFRALCTGEYGKGKLGKALHFTGSHFHRIIPQFMIQGGDITNFNGTGG 89 (426)
Q Consensus 10 ~~~~~~~~~~~~~~~G~i~~~l~~~~~P~~~~nf~~l~~~~~~~~~~~k~~~y~~~~f~rv~~~~~iq~G~~~~~~~~~~ 89 (426)
.+.|.|+|+. |+|+||||++.||+||+||++||+ .+||+|+.||||+|+|||||||++ ++|+||
T Consensus 5 ~~~v~~~T~~-----G~i~ieL~~~~aP~t~~NF~~L~~----------~g~Y~g~~fhRvi~~f~iQgGd~~-~~g~gg 68 (160)
T 2fu0_A 5 PKSAIIYTTM-----GDIHISLFYKECKKTVQNFSVHSI----------NGYYNNCIFHRVIKHFMVQTGDPS-GDGTGG 68 (160)
T ss_dssp CCEEEEEETT-----EEEEEEECTTTCHHHHHHHHHHHH----------TTTTTTCBCCEEETTTEEEECCTT-SSSSCC
T ss_pred CCEEEEEecC-----ccEEEEEeCCCChHHHHHHHHHhc----------cCccCCCEEEEEECCCEEEeCCcC-CCCCCC
Confidence 5678888765 999999999999999999999996 478999999999999999999996 789999
Q ss_pred ccccCCCcCCccc-cccCCCCCCCCCCcchhhhhhhhhhcceeeeeeccccCCCCCCCCCCCccccceEEEEeecccccc
Q psy6102 90 ESIYGPCFEDENF-KLKGIYPKNKYPGIYPSLVKAMFRMLTFTSMVCLFSLGSGLGLGLASTLVGSYQFSCTVSFLNTFT 168 (426)
Q Consensus 90 ~~~~~~~~~~e~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~sqF~i~~~~~~~~~ 168 (426)
+|+||++|+||+. .++|++ +|+ ||||+. | |+ +++||||||+.
T Consensus 69 ~si~g~~~~dE~~~~l~h~~-----~G~--------------lsmA~~---g-------p~--s~~SQFfI~~~------ 111 (160)
T 2fu0_A 69 ESIWGNEFEDEFFDHLNHSK-----PFM--------------VSMANC---G-------PN--TNGSQFFITTV------ 111 (160)
T ss_dssp CCTTSSCBCCCCBTTBCSSS-----SSE--------------EEECCS---S-------TT--CBCSCEEEESS------
T ss_pred CcccCCCccccccCCcccCC-----ceE--------------EEEecC---C-------CC--CcccEEEEECC------
Confidence 9999999999987 588988 899 999999 8 99 99999999999
Q ss_pred CchhhhhhhhHHHHHHHHhhhhhhhhhhhchhhhhHhhhcchHHHhhhccCCCCccchhHHHHHhhhcccccceechhhc
Q psy6102 169 NNCEIHLQRLNVKLRKIEADLSILEAKHYYNQGALEKKRGITEHKKKLETGRGKEISRKQYRDLVKKKKKKNGIFGCVRQ 248 (426)
Q Consensus 169 ~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~vFG~Vie 248 (426)
++| |||+ +|++||+|++
T Consensus 112 -~~~-~Ldg-------------------------------------------------------------~~tvFG~Vv~ 128 (160)
T 2fu0_A 112 -PCP-WLDF-------------------------------------------------------------KHTVFGKVTQ 128 (160)
T ss_dssp -CCG-GGTT-------------------------------------------------------------TSCEEEEEEE
T ss_pred -CCC-ccCC-------------------------------------------------------------CcEEEEEEEc
Confidence 999 9999 9999999999
Q ss_pred cccHHHHHhhchhh-CCcccccchhh
Q psy6102 249 GFGVAREVSYVEAE-NDKPLVLNQME 273 (426)
Q Consensus 249 Gldvl~~I~~l~~~-~~~P~~~i~il 273 (426)
|++++++|+.+++. .++|..++.|.
T Consensus 129 G~dvv~~I~~~~t~~~~~P~~~v~I~ 154 (160)
T 2fu0_A 129 GSKIVLDIEKVRTDKRDKPLEDIKIL 154 (160)
T ss_dssp CHHHHHHHHTSCBCTTSCBSSCCBEE
T ss_pred CHHHHHHHHhCCcCCCCCcCCCeEEE
Confidence 99999999999984 68888776654
No 22
>2x7k_A Peptidyl-prolyl CIS-trans isomerase-like 1; isomerase-immunosuppressant complex, immunosuppressant; HET: MLE MVA BMT ABA SAR; 1.15A {Homo sapiens} PDB: 1xwn_A
Probab=100.00 E-value=2.1e-39 Score=288.22 Aligned_cols=150 Identities=41% Similarity=0.588 Sum_probs=138.0
Q ss_pred CCCceEEEEEEECCeeeeeEEEEecCCCChHHHHHHHHhhhCCCCCCCCCccccccCCcccccccccEEeeCccccCCCC
Q psy6102 8 EGNYIVFLDVSIGEEKVGRMVIELFKHIVPKTAENFRALCTGEYGKGKLGKALHFTGSHFHRIIPQFMIQGGDITNFNGT 87 (426)
Q Consensus 8 ~~~~~~~~~~~~~~~~~G~i~~~l~~~~~P~~~~nf~~l~~~~~~~~~~~k~~~y~~~~f~rv~~~~~iq~G~~~~~~~~ 87 (426)
..++.|.|+|+. |+|+||||++.||+||+||++||+ .+||+|+.||||+|+|||||||++ ++|+
T Consensus 9 ~~~~~v~l~t~~-----G~i~ieL~~~~aP~t~~NF~~L~~----------~g~Y~g~~fhRvi~~f~iQgGd~~-~~g~ 72 (166)
T 2x7k_A 9 WQPPNVYLETSM-----GIIVLELYWKHAPKTCKNFAELAR----------RGYYNGTKFHRIIKDFMIQGGDPT-GTGR 72 (166)
T ss_dssp CCCSEEEEEETT-----EEEEEEECTTTCHHHHHHHHHHHH----------HTTTTTEECCEEETTTEEEECCTT-SSSS
T ss_pred cCCCEEEEEeCC-----CcEEEEEccCCCCHHHHHHHHHHh----------cCCCCCCEEEEEECCCEEEcCCCC-CCCC
Confidence 367899999975 999999999999999999999995 578999999999999999999997 7899
Q ss_pred CCccccCCCcCCcc-ccccCCCCCCCCCCcchhhhhhhhhhcceeeeeeccccCCCCCCCCCCCccccceEEEEeecccc
Q psy6102 88 GGESIYGPCFEDEN-FKLKGIYPKNKYPGIYPSLVKAMFRMLTFTSMVCLFSLGSGLGLGLASTLVGSYQFSCTVSFLNT 166 (426)
Q Consensus 88 ~~~~~~~~~~~~e~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~sqF~i~~~~~~~ 166 (426)
||+|+||..|+||+ ..++|++ ||+ ||||+. | |+ +++||||||++
T Consensus 73 gg~si~g~~~~dE~~~~l~h~~-----~G~--------------lsmAn~---g-------p~--s~gSQFfI~~~---- 117 (166)
T 2x7k_A 73 GGASIYGKQFEDELHPDLKFTG-----AGI--------------LAMANA---G-------PD--TNGSQFFVTLA---- 117 (166)
T ss_dssp CCCCTTSSCBCCCCCTTSCCCS-----TTE--------------EEECBS---S-------TT--CBCSCEEEESS----
T ss_pred CCCccCCCccccccccccCCCC-----CeE--------------EEEeeC---C-------CC--CccceEEEECC----
Confidence 99999999999998 4788988 899 999999 8 99 99999999999
Q ss_pred ccCchhhhhhhhHHHHHHHHhhhhhhhhhhhchhhhhHhhhcchHHHhhhccCCCCccchhHHHHHhhhcccccceechh
Q psy6102 167 FTNNCEIHLQRLNVKLRKIEADLSILEAKHYYNQGALEKKRGITEHKKKLETGRGKEISRKQYRDLVKKKKKKNGIFGCV 246 (426)
Q Consensus 167 ~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~vFG~V 246 (426)
+++ |||+ +|++||+|
T Consensus 118 ---~~~-~Ldg-------------------------------------------------------------~~tvFG~V 132 (166)
T 2x7k_A 118 ---PTQ-WLDG-------------------------------------------------------------KHTIFGRV 132 (166)
T ss_dssp ---CCG-GGTT-------------------------------------------------------------TSCEEEEE
T ss_pred ---CCC-ccCC-------------------------------------------------------------CeeEEEEE
Confidence 999 9999 99999999
Q ss_pred hccccHHHHHhhchhh-CCcccccchhh
Q psy6102 247 RQGFGVAREVSYVEAE-NDKPLVLNQME 273 (426)
Q Consensus 247 ieGldvl~~I~~l~~~-~~~P~~~i~il 273 (426)
++|++++++|+.+++. .++|..++.|.
T Consensus 133 v~G~dvv~~I~~~~t~~~~~P~~~i~I~ 160 (166)
T 2x7k_A 133 CQGIGMVNRVGMVETNSQDRPVDDVKII 160 (166)
T ss_dssp EECHHHHHHHTTSCBCTTSCBSSCCEEE
T ss_pred EcCHHHHHHHHcCCcCCCCCcCCCeEEE
Confidence 9999999999999984 46888776654
No 23
>1w74_A Peptidyl-prolyl CIS-trans isomerase A; cyclophilin, ppiase, RV0009, rotamase, structural proteomics in europe, spine; 2.6A {Mycobacterium tuberculosis} SCOP: b.62.1.1
Probab=100.00 E-value=4.3e-39 Score=291.64 Aligned_cols=158 Identities=34% Similarity=0.436 Sum_probs=140.0
Q ss_pred cCCCceEEEEEEECCeeeeeEEEEecCCCChHHHHHHHHhhhCCCCCCCC-----CccccccCCcccccccccEEeeCcc
Q psy6102 7 KEGNYIVFLDVSIGEEKVGRMVIELFKHIVPKTAENFRALCTGEYGKGKL-----GKALHFTGSHFHRIIPQFMIQGGDI 81 (426)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~G~i~~~l~~~~~P~~~~nf~~l~~~~~~~~~~-----~k~~~y~~~~f~rv~~~~~iq~G~~ 81 (426)
.+.++.|.|+++. |+|+||||++.||+||+||++||+|++++... .+.+||+|+.||||||+|||||||+
T Consensus 20 ~~~~~~v~l~t~~-----G~I~ieL~~~~aP~tv~NF~~L~tG~~~~~~~~~g~~~~~~~Y~g~~FhRVi~~fmiQgGd~ 94 (191)
T 1w74_A 20 PLATATATLHTNR-----GDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPFYDGAVFHRVIQGFMIQGGDP 94 (191)
T ss_dssp -CCSEEEEEEETT-----EEEEEEECTTTSHHHHHHHHHHHHTCSCCSSCCTTBSSSSCSSTTEEEEEEETTTEEEECCT
T ss_pred CCCCeEEEEEecc-----eeEEEEEcCCCChHHHHHHHHHhcCCcccccccccccccCCccCCCEEEEEeCCCEEecCCC
Confidence 4556888888775 99999999999999999999999999886432 2468999999999999999999998
Q ss_pred ccCCCCCCccccCCCcCCcc-ccccCCCCCCCCCCcchhhhhhhhhhcceeeeeeccccCCCCCCCCCCCccccceEEEE
Q psy6102 82 TNFNGTGGESIYGPCFEDEN-FKLKGIYPKNKYPGIYPSLVKAMFRMLTFTSMVCLFSLGSGLGLGLASTLVGSYQFSCT 160 (426)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~e~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~sqF~i~ 160 (426)
. ++|+|| +|+.|+||+ +.++|++ ||+ |||||. | |+ +++||||||
T Consensus 95 ~-g~G~gg---~g~~f~dE~~~~l~h~~-----~G~--------------lsMAn~---g-------pn--tngSQFFIt 139 (191)
T 1w74_A 95 T-GTGRGG---PGYKFADEFHPELQFDK-----PYL--------------LAMANA---G-------PG--TNGSQFFIT 139 (191)
T ss_dssp T-SSSSCC---SSCCBCCCCCTTCCSCS-----SSE--------------EEECCS---S-------TT--CBSSCEEEE
T ss_pred C-CCCCCC---CCCccccccccCCCcCC-----CcE--------------EEEeeC---C-------CC--CccceEEEE
Confidence 5 678888 489999995 6889988 899 999999 8 99 999999999
Q ss_pred eeccccccCchhhhhhhhHHHHHHHHhhhhhhhhhhhchhhhhHhhhcchHHHhhhccCCCCccchhHHHHHhhhccccc
Q psy6102 161 VSFLNTFTNNCEIHLQRLNVKLRKIEADLSILEAKHYYNQGALEKKRGITEHKKKLETGRGKEISRKQYRDLVKKKKKKN 240 (426)
Q Consensus 161 ~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 240 (426)
+. ++| |||+ +|
T Consensus 140 ~~-------~~~-~LDg-------------------------------------------------------------~~ 150 (191)
T 1w74_A 140 VG-------KTP-HLNR-------------------------------------------------------------RH 150 (191)
T ss_dssp SS-------CCG-GGTT-------------------------------------------------------------TS
T ss_pred cC-------CCc-ccCC-------------------------------------------------------------Ce
Confidence 99 999 9999 99
Q ss_pred ceechhhc--cccHHHHHhhchh-hCCcccccchhh
Q psy6102 241 GIFGCVRQ--GFGVAREVSYVEA-ENDKPLVLNQME 273 (426)
Q Consensus 241 ~vFG~Vie--Gldvl~~I~~l~~-~~~~P~~~i~il 273 (426)
++||+|++ |++++++|+.+++ ..++|..++.|.
T Consensus 151 tVFG~Vv~~~Gmdvv~~I~~~~t~~~~~P~~~v~I~ 186 (191)
T 1w74_A 151 TIFGEVIDAESQRVVEAISKTATDGNDRPTDPVVIE 186 (191)
T ss_dssp CEEEEECSHHHHHHHHHHHTSCBCTTSCBSSCCEEE
T ss_pred eEEEEEEECCCHHHHHHHHcCCcCCCCCcCCCeEEE
Confidence 99999999 9999999999998 457888777664
No 24
>2a2n_A Peptidylprolyl isomerase domain and WD repeat CON; CIS-trans isomerization, protein-folding, peptidylprolyl ISO structural genomics; 1.65A {Homo sapiens} SCOP: b.62.1.1
Probab=100.00 E-value=5.6e-39 Score=287.75 Aligned_cols=148 Identities=37% Similarity=0.503 Sum_probs=134.4
Q ss_pred CceEEEEEEECCeeeeeEEEEecCCCChHHHHHHHHhhhCCCCCCCCCccccccCCcccccccccEEeeCccccCCCCCC
Q psy6102 10 NYIVFLDVSIGEEKVGRMVIELFKHIVPKTAENFRALCTGEYGKGKLGKALHFTGSHFHRIIPQFMIQGGDITNFNGTGG 89 (426)
Q Consensus 10 ~~~~~~~~~~~~~~~G~i~~~l~~~~~P~~~~nf~~l~~~~~~~~~~~k~~~y~~~~f~rv~~~~~iq~G~~~~~~~~~~ 89 (426)
...|.|+|+ .|+|+||||++.||+||+||++||+ .+||+|+.||||+|+|||||||+. ++|+||
T Consensus 21 ~~~v~~~t~-----~G~i~ieL~~~~aP~t~~NF~~L~~----------~g~Y~g~~FhRvi~~f~iQgGd~~-~~g~gg 84 (176)
T 2a2n_A 21 SDSAIIHTS-----MGDIHTKLFPVECPKTVENFCVHSR----------NGYYNGHTFHRIIKGFMIQTGDPT-GTGMGG 84 (176)
T ss_dssp CSEEEEEET-----TEEEEEEECTTTCHHHHHHHHHHHH----------TTTTTTCBCCEEETTTEEEECCTT-SSSSCC
T ss_pred CCEEEEEec-----CccEEEEEeCCCChHHHHHHHHHhh----------cCccCCCEEEEEECCcEEEccCCC-CCCCCC
Confidence 445566554 5999999999999999999999996 478999999999999999999996 789999
Q ss_pred ccccCCCcCCccc-cccCCCCCCCCCCcchhhhhhhhhhcceeeeeeccccCCCCCCCCCCCccccceEEEEeecccccc
Q psy6102 90 ESIYGPCFEDENF-KLKGIYPKNKYPGIYPSLVKAMFRMLTFTSMVCLFSLGSGLGLGLASTLVGSYQFSCTVSFLNTFT 168 (426)
Q Consensus 90 ~~~~~~~~~~e~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~sqF~i~~~~~~~~~ 168 (426)
.|+||+.|+||++ .++|++ +|+ ||||+. | |+ +++||||||+.
T Consensus 85 ~si~g~~~~dE~~~~l~h~~-----~G~--------------lsmA~~---g-------p~--s~gSQFFIt~~------ 127 (176)
T 2a2n_A 85 ESIWGGEFEDEFHSTLRHDR-----PYT--------------LSMANA---G-------SN--TNGSQFFITVV------ 127 (176)
T ss_dssp CCTTSSCBCCCCCTTCCSCS-----SSE--------------EEECCS---S-------TT--CBCSCEEEESS------
T ss_pred CcccCCccccccccccccCC-----ceE--------------EEEEeC---C-------CC--CcccEEEEECC------
Confidence 9999999999987 688988 899 999999 8 99 99999999999
Q ss_pred CchhhhhhhhHHHHHHHHhhhhhhhhhhhchhhhhHhhhcchHHHhhhccCCCCccchhHHHHHhhhcccccceechhhc
Q psy6102 169 NNCEIHLQRLNVKLRKIEADLSILEAKHYYNQGALEKKRGITEHKKKLETGRGKEISRKQYRDLVKKKKKKNGIFGCVRQ 248 (426)
Q Consensus 169 ~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~vFG~Vie 248 (426)
+++ |||+ +|++||+|++
T Consensus 128 -~~~-~LDg-------------------------------------------------------------~~tVFG~Vv~ 144 (176)
T 2a2n_A 128 -PTP-WLDN-------------------------------------------------------------KHTVFGRVTK 144 (176)
T ss_dssp -CCG-GGTT-------------------------------------------------------------TSCEEEEEEE
T ss_pred -CCC-ccCC-------------------------------------------------------------CeeEEEEEeC
Confidence 999 9999 9999999999
Q ss_pred cccHHHHHhhchhh--CCcccccchhh
Q psy6102 249 GFGVAREVSYVEAE--NDKPLVLNQME 273 (426)
Q Consensus 249 Gldvl~~I~~l~~~--~~~P~~~i~il 273 (426)
|++++++|+.+++. .++|..++.|.
T Consensus 145 Gmdvv~~I~~~~t~~~~~~P~~~v~I~ 171 (176)
T 2a2n_A 145 GMEVVQRISNVKVNPKTDKPYEDVSII 171 (176)
T ss_dssp CHHHHHHHHTSCBCTTTCCBSSCCBEE
T ss_pred CHHHHHHHHcCCccCCCCccCCCeEEE
Confidence 99999999999886 67888776654
No 25
>2ok3_A Peptidyl-prolyl CIS-trans isomerase-like 3; beta-barrel, helix, disulfide bridge; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1xyh_A 2oju_A*
Probab=100.00 E-value=1.7e-38 Score=281.43 Aligned_cols=146 Identities=38% Similarity=0.535 Sum_probs=132.4
Q ss_pred eEEEEEEECCeeeeeEEEEecCCCChHHHHHHHHhhhCCCCCCCCCccccccCCcccccccccEEeeCccccCCCCCCcc
Q psy6102 12 IVFLDVSIGEEKVGRMVIELFKHIVPKTAENFRALCTGEYGKGKLGKALHFTGSHFHRIIPQFMIQGGDITNFNGTGGES 91 (426)
Q Consensus 12 ~~~~~~~~~~~~~G~i~~~l~~~~~P~~~~nf~~l~~~~~~~~~~~k~~~y~~~~f~rv~~~~~iq~G~~~~~~~~~~~~ 91 (426)
+|.|+|+ .|+|+||||++.||+||+||++||++ +||+|+.||||+|+|||||||++ ++|+||+|
T Consensus 2 ~v~~~T~-----~G~i~ieL~~~~aP~t~~NF~~L~~~----------g~Y~g~~fhRvi~~f~iQgGd~~-~~g~gg~s 65 (161)
T 2ok3_A 2 SVTLHTD-----VGDIKIEVFCERTPKTCENFLALCAS----------NYYNGCIFHRNIKGFMVQTGDPT-GTGRGGNS 65 (161)
T ss_dssp EEEEEET-----TEEEEEEECTTTCHHHHHHHHHHHHT----------TTTTTCBCCEEETTTEEEECCTT-SSSSCCCC
T ss_pred EEEEEeC-----CccEEEEEcCCCCcHHHHHHHHHhhh----------cccCCCEEEEEECCCEEecCCCC-CCCCCCCc
Confidence 4556554 59999999999999999999999964 67999999999999999999997 78999999
Q ss_pred ccCCCcCCccc-cccCCCCCCCCCCcchhhhhhhhhhcceeeeeeccccCCCCCCCCCCCccccceEEEEeeccccccCc
Q psy6102 92 IYGPCFEDENF-KLKGIYPKNKYPGIYPSLVKAMFRMLTFTSMVCLFSLGSGLGLGLASTLVGSYQFSCTVSFLNTFTNN 170 (426)
Q Consensus 92 ~~~~~~~~e~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~sqF~i~~~~~~~~~~~ 170 (426)
+||.+|+||+. .++|++ ||+ ||||+. | |+ +++||||||++ +
T Consensus 66 i~g~~~~dE~~~~l~h~~-----~G~--------------lsma~~---g-------p~--s~~SQFfI~~~-------~ 107 (161)
T 2ok3_A 66 IWGKKFEDEYSEYLKHNV-----RGV--------------VSMANN---G-------PN--TNGSQFFITYG-------K 107 (161)
T ss_dssp TTSSCBCCCCCTTCCSCS-----TTE--------------EEECCS---S-------TT--CBCSCEEEESS-------C
T ss_pred ccCCccccccCcCcCcCC-----CeE--------------EEEecC---C-------CC--CcceEEEEEcC-------C
Confidence 99999999985 688888 899 999999 8 99 99999999999 9
Q ss_pred hhhhhhhhHHHHHHHHhhhhhhhhhhhchhhhhHhhhcchHHHhhhccCCCCccchhHHHHHhhhcccccceechhhccc
Q psy6102 171 CEIHLQRLNVKLRKIEADLSILEAKHYYNQGALEKKRGITEHKKKLETGRGKEISRKQYRDLVKKKKKKNGIFGCVRQGF 250 (426)
Q Consensus 171 ~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~vFG~VieGl 250 (426)
++ |||+ +|++||+|++|+
T Consensus 108 ~~-~Ldg-------------------------------------------------------------~~tvFG~Vv~G~ 125 (161)
T 2ok3_A 108 QP-HLDM-------------------------------------------------------------KYTVFGKVIDGL 125 (161)
T ss_dssp CG-GGTT-------------------------------------------------------------TSCEEEEEEECH
T ss_pred CC-ccCC-------------------------------------------------------------CEeEEEEEeCCH
Confidence 99 9999 999999999999
Q ss_pred cHHHHHhhchhhC--Ccccccchhh
Q psy6102 251 GVAREVSYVEAEN--DKPLVLNQME 273 (426)
Q Consensus 251 dvl~~I~~l~~~~--~~P~~~i~il 273 (426)
+++++|+.+++.. ++|..++.|.
T Consensus 126 dvv~~I~~~~~~~~~~~P~~~v~I~ 150 (161)
T 2ok3_A 126 ETLDELEKLPVNEKTYRPLNDVHIK 150 (161)
T ss_dssp HHHHHHHTCCBCTTTCCBSSCCBEE
T ss_pred HHHHHHHhCCccCCCCCcCCCeEEE
Confidence 9999999999843 7888776654
No 26
>2b71_A Cyclophilin-like protein; structural genomics, structural genomics consortium, SGC, isomerase; 2.50A {Plasmodium yoelii} SCOP: b.62.1.1
Probab=100.00 E-value=1.1e-38 Score=289.83 Aligned_cols=151 Identities=35% Similarity=0.529 Sum_probs=138.2
Q ss_pred CCCceEEEEEEECCeeeeeEEEEecCCCChHHHHHHHHhhhCCCCCCCCCccccccCCcccccccccEEeeCccccCCCC
Q psy6102 8 EGNYIVFLDVSIGEEKVGRMVIELFKHIVPKTAENFRALCTGEYGKGKLGKALHFTGSHFHRIIPQFMIQGGDITNFNGT 87 (426)
Q Consensus 8 ~~~~~~~~~~~~~~~~~G~i~~~l~~~~~P~~~~nf~~l~~~~~~~~~~~k~~~y~~~~f~rv~~~~~iq~G~~~~~~~~ 87 (426)
..+++|.|+|+. |+|+||||++.||+||+||++||+ .+||+|+.||||+|+|||||||++ ++|+
T Consensus 36 ~~~~~V~l~T~~-----G~I~ieL~~~~aP~tv~NF~~L~~----------~g~Y~g~~FhRVi~~f~iQgGd~~-~~g~ 99 (196)
T 2b71_A 36 TERGYITIYTNL-----GDFEVELYWYHSPKTCLNFYTLCE----------MGFYDNTIFHRVIPNFVIQGGDPT-GTGK 99 (196)
T ss_dssp HHSCEEEEEETT-----EEEEEEECTTTSHHHHHHHHHHHH----------TTTTTTEEEEEEETTTEEEEEETT-SSSS
T ss_pred CCCcEEEEEeCC-----CCEEEEEeCCCCcHHHHHHHHHhh----------cCCcCCCEEEEEeCCcEEEcCCCC-CCCC
Confidence 457899999875 999999999999999999999996 478999999999999999999997 7899
Q ss_pred CCccccCCCcCCcc-ccccCCCCCCCCCCcchhhhhhhhhhcceeeeeeccccCCCCCCCCCCCccccceEEEEeecccc
Q psy6102 88 GGESIYGPCFEDEN-FKLKGIYPKNKYPGIYPSLVKAMFRMLTFTSMVCLFSLGSGLGLGLASTLVGSYQFSCTVSFLNT 166 (426)
Q Consensus 88 ~~~~~~~~~~~~e~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~sqF~i~~~~~~~ 166 (426)
||+|+||.+|++|+ ..++|++ ||+ ||||+. | |+ +++||||||++
T Consensus 100 gg~si~g~~~~dE~~~~l~h~~-----~G~--------------lsMAn~---g-------pn--s~gSQFFIt~~---- 144 (196)
T 2b71_A 100 GGKSIYGEYFEDEINKELKHTG-----AGI--------------LSMSNN---G-------PN--TNSSQFFITLA---- 144 (196)
T ss_dssp CCCBTTBSCBCCCCCTTCCCCS-----TTE--------------EEECCS---S-------TT--CBSSCEEEESS----
T ss_pred CCCccCCCcccccccCCcCcCC-----CeE--------------EEEccC---C-------CC--CcccEEEEECC----
Confidence 99999999999996 5788888 899 999999 8 99 99999999999
Q ss_pred ccCchhhhhhhhHHHHHHHHhhhhhhhhhhhchhhhhHhhhcchHHHhhhccCCCCccchhHHHHHhhhcccccceechh
Q psy6102 167 FTNNCEIHLQRLNVKLRKIEADLSILEAKHYYNQGALEKKRGITEHKKKLETGRGKEISRKQYRDLVKKKKKKNGIFGCV 246 (426)
Q Consensus 167 ~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~vFG~V 246 (426)
+++ |||+ +|++||+|
T Consensus 145 ---~~~-~LDg-------------------------------------------------------------~~tVFG~V 159 (196)
T 2b71_A 145 ---PLP-HLDG-------------------------------------------------------------KHTIFARV 159 (196)
T ss_dssp ---CCG-GGTT-------------------------------------------------------------TSCEEEEE
T ss_pred ---CCC-ccCC-------------------------------------------------------------CEeEEEEE
Confidence 999 9999 99999999
Q ss_pred hccccHHHHHhhchh-hCCcccccchhhh
Q psy6102 247 RQGFGVAREVSYVEA-ENDKPLVLNQMED 274 (426)
Q Consensus 247 ieGldvl~~I~~l~~-~~~~P~~~i~ilk 274 (426)
++|++++++|+.+++ ..++|..++.|.+
T Consensus 160 v~Gmdvv~~I~~~~t~~~~~P~~~i~I~~ 188 (196)
T 2b71_A 160 SKNMTCIENIASVQTTATNKPIFDLKILR 188 (196)
T ss_dssp EECHHHHHHHHTSCBCTTCCBSSCCEEEE
T ss_pred ecCHHHHHHHHhCCcCCCCCCCCCeEEEE
Confidence 999999999999998 4578887766643
No 27
>1zkc_A Peptidyl-prolyl CIS-trans isomerase like 2; CIS-trans isomerization, peptidylprolyl isomerase, protein- folding, structural genomics consortium; 1.65A {Homo sapiens} SCOP: b.62.1.1
Probab=100.00 E-value=2e-38 Score=288.05 Aligned_cols=151 Identities=39% Similarity=0.578 Sum_probs=136.9
Q ss_pred CCCceEEEEEEECCeeeeeEEEEecCCCChHHHHHHHHhhhCCCCCCCCCccccccCCcccccccccEEeeCccccCCCC
Q psy6102 8 EGNYIVFLDVSIGEEKVGRMVIELFKHIVPKTAENFRALCTGEYGKGKLGKALHFTGSHFHRIIPQFMIQGGDITNFNGT 87 (426)
Q Consensus 8 ~~~~~~~~~~~~~~~~~G~i~~~l~~~~~P~~~~nf~~l~~~~~~~~~~~k~~~y~~~~f~rv~~~~~iq~G~~~~~~~~ 87 (426)
.....|.|+|+. |+|+||||++.||+||+||++||+ .+||+|+.||||||+|||||||++ ++|+
T Consensus 17 ~~~~~v~l~T~~-----G~I~ieL~~~~aP~tv~NF~~L~~----------~g~Ydg~~FhRVi~~f~iQgGd~~-~~g~ 80 (197)
T 1zkc_A 17 RGSGYVRLHTNK-----GDLNLELHCDLTPKTCENFIRLCK----------KHYYDGTIFHRSIRNFVIQGGDPT-GTGT 80 (197)
T ss_dssp CSCEEEEEEETT-----EEEEEEECTTTSHHHHHHHHHHHH----------TTTTTTEEEEEEETTTEEEECCTT-SSSS
T ss_pred CCCcEEEEEeCC-----ccEEEEEcCCCCcHHHHHHHHHHh----------cCCCCCCEEEEEeCCCEEEcCCCC-CCCC
Confidence 345677887765 999999999999999999999995 478999999999999999999997 7899
Q ss_pred CCccccCCCcCCcc-ccccCCCCCCCCCCcchhhhhhhhhhcceeeeeeccccCCCCCCCCCCCccccceEEEEeecccc
Q psy6102 88 GGESIYGPCFEDEN-FKLKGIYPKNKYPGIYPSLVKAMFRMLTFTSMVCLFSLGSGLGLGLASTLVGSYQFSCTVSFLNT 166 (426)
Q Consensus 88 ~~~~~~~~~~~~e~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~sqF~i~~~~~~~ 166 (426)
||+|+||.+|+||+ ..++|+. +|+ ||||+. | |+ +++||||||+.
T Consensus 81 Gg~si~g~~f~dE~~~~l~h~~-----~G~--------------lsMAn~---g-------p~--sngSQFFIt~~---- 125 (197)
T 1zkc_A 81 GGESYWGKPFKDEFRPNLSHTG-----RGI--------------LSMANS---G-------PN--SNRSQFFITFR---- 125 (197)
T ss_dssp CCCBTTBSCBCCCCCTTCCSCS-----TTE--------------EEECCS---S-------TT--CBCSCEEEESS----
T ss_pred CCCccCCCccccccCcCcCCCC-----ceE--------------EEEecC---C-------CC--CcccEEEEEcC----
Confidence 99999999999995 7788988 899 999999 8 99 99999999999
Q ss_pred ccCchhhhhhhhHHHHHHHHhhhhhhhhhhhchhhhhHhhhcchHHHhhhccCCCCccchhHHHHHhhhcccccceechh
Q psy6102 167 FTNNCEIHLQRLNVKLRKIEADLSILEAKHYYNQGALEKKRGITEHKKKLETGRGKEISRKQYRDLVKKKKKKNGIFGCV 246 (426)
Q Consensus 167 ~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~vFG~V 246 (426)
+++ +||+ +|++||+|
T Consensus 126 ---~~~-~LDg-------------------------------------------------------------~~tVFG~V 140 (197)
T 1zkc_A 126 ---SCA-YLDK-------------------------------------------------------------KHTIFGRV 140 (197)
T ss_dssp ---CCG-GGTT-------------------------------------------------------------TSCEEEEE
T ss_pred ---CCC-ccCC-------------------------------------------------------------CccEEEEE
Confidence 999 9999 99999999
Q ss_pred hccccHHHHHhhchhhC--Ccccccchhhh
Q psy6102 247 RQGFGVAREVSYVEAEN--DKPLVLNQMED 274 (426)
Q Consensus 247 ieGldvl~~I~~l~~~~--~~P~~~i~ilk 274 (426)
++|++++++|+.+++.. ++|..++.|.+
T Consensus 141 v~Gmdvv~~I~~~~t~~~~~~P~~~i~I~~ 170 (197)
T 1zkc_A 141 VGGFDVLTAMENVESDPKTDRPKEEIRIDA 170 (197)
T ss_dssp EECHHHHHHHHHSCBCTTTCCBSSCCEEEE
T ss_pred EcCHHHHHHHHcCCCCCCCCCcCCCeEEEE
Confidence 99999999999999844 78887766643
No 28
>2poe_A Cyclophilin-like protein, putative; cryptosporidium parvum cyclophilin isomerase, structural genomics; 2.01A {Cryptosporidium parvum iowa II} PDB: 2qer_A
Probab=100.00 E-value=3.6e-38 Score=284.67 Aligned_cols=154 Identities=34% Similarity=0.427 Sum_probs=135.4
Q ss_pred CCceEEEEEEECCeeeeeEEEEecCCCChHHHHHHHHhhhCCCCCCCCCccccccCCcccccccccEEeeCccccCCCCC
Q psy6102 9 GNYIVFLDVSIGEEKVGRMVIELFKHIVPKTAENFRALCTGEYGKGKLGKALHFTGSHFHRIIPQFMIQGGDITNFNGTG 88 (426)
Q Consensus 9 ~~~~~~~~~~~~~~~~G~i~~~l~~~~~P~~~~nf~~l~~~~~~~~~~~k~~~y~~~~f~rv~~~~~iq~G~~~~~~~~~ 88 (426)
....|.|+| +.|+|+||||++.||+||+||++||+ .+||+|+.||||+|+|||||||++ ++|+|
T Consensus 15 ~~~~v~i~t-----~~G~i~ieL~~~~aP~t~~NF~~L~~----------~g~Y~g~~FhRvi~~f~iQgGd~~-~~g~g 78 (185)
T 2poe_A 15 YFQGVRIIT-----NYGDLKFELFCSQCPKACKNFLALSA----------SGYYKNTIFHKNIKGFIIQGGDPT-GTGKG 78 (185)
T ss_dssp CCCEEEEEE-----TTEEEEEEECTTTCHHHHHHHHHHHH----------TTTTTTEEEEEECTTSEEEEEETT-SSSSC
T ss_pred CceEEEEEe-----cCccEEEEEeCCCCcHHHHHHHHHhc----------cCCCCCCEEEEEECCCEEEcCCCC-CCCCC
Confidence 345566665 46999999999999999999999996 478999999999999999999997 78999
Q ss_pred CccccCCCcCCcc-ccccCCCCCCCCCCcchhhhhhhhhhcceeeeeeccccCCCCCCCCCCCccccceEEEEeeccccc
Q psy6102 89 GESIYGPCFEDEN-FKLKGIYPKNKYPGIYPSLVKAMFRMLTFTSMVCLFSLGSGLGLGLASTLVGSYQFSCTVSFLNTF 167 (426)
Q Consensus 89 ~~~~~~~~~~~e~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~sqF~i~~~~~~~~ 167 (426)
|.|+||.+|++|+ ..++|++ ||+ ||||+. |+ ..+|+ +++||||||++
T Consensus 79 g~si~g~~~~dE~~~~l~h~~-----~G~--------------lsmA~~---g~---~~~p~--s~gSQFFIt~~----- 126 (185)
T 2poe_A 79 GESIYGRYFDDEIYPELKYDR-----RGI--------------LSMASK---GA---SKKPN--TNGSQFFITYS----- 126 (185)
T ss_dssp CCBTTBSCBCCCCCTTSCCCS-----TTE--------------EEECCS---CC----CCCS--CBCSCEEEESS-----
T ss_pred CCccCCCcccccccCCCccCC-----CeE--------------EEEecC---CC---CCCCC--CccceEEEECC-----
Confidence 9999999999998 6888888 899 999998 62 12378 99999999999
Q ss_pred cCchhhhhhhhHHHHHHHHhhhhhhhhhhhchhhhhHhhhcchHHHhhhccCCCCccchhHHHHHhhhcccccceechhh
Q psy6102 168 TNNCEIHLQRLNVKLRKIEADLSILEAKHYYNQGALEKKRGITEHKKKLETGRGKEISRKQYRDLVKKKKKKNGIFGCVR 247 (426)
Q Consensus 168 ~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~vFG~Vi 247 (426)
+++ |||+ +|++||+|+
T Consensus 127 --~~~-~LDg-------------------------------------------------------------~~tVFG~Vv 142 (185)
T 2poe_A 127 --SLP-QLNG-------------------------------------------------------------EYVIFGKLI 142 (185)
T ss_dssp --CCG-GGTT-------------------------------------------------------------TSCEEEEEE
T ss_pred --CCC-ccCC-------------------------------------------------------------CeeEEEEEe
Confidence 999 9999 999999999
Q ss_pred ccccHHHHHhhchh-hCCcccccchhhh
Q psy6102 248 QGFGVAREVSYVEA-ENDKPLVLNQMED 274 (426)
Q Consensus 248 eGldvl~~I~~l~~-~~~~P~~~i~ilk 274 (426)
+|++++++|+.+++ .+++|..++.|.+
T Consensus 143 ~Gmdvv~~I~~~~t~~~~~P~~~v~I~~ 170 (185)
T 2poe_A 143 DGFETLNTLENCPSDKSHKPIDEIIIKD 170 (185)
T ss_dssp ECHHHHHHHHHSCBCTTSCBSSCCEEEE
T ss_pred CCHHHHHHHHhCCcCCCCCcCCCeEEEE
Confidence 99999999999988 4578887766543
No 29
>2k7n_A Peptidyl-prolyl CIS-trans isomerase-like 1; beta barrel, disorder-order transition, HOOK-like, mRNA processing, mRNA splicing, rotamase; NMR {Homo sapiens}
Probab=100.00 E-value=3.4e-38 Score=287.58 Aligned_cols=151 Identities=40% Similarity=0.585 Sum_probs=138.3
Q ss_pred CCCceEEEEEEECCeeeeeEEEEecCCCChHHHHHHHHhhhCCCCCCCCCccccccCCcccccccccEEeeCccccCCCC
Q psy6102 8 EGNYIVFLDVSIGEEKVGRMVIELFKHIVPKTAENFRALCTGEYGKGKLGKALHFTGSHFHRIIPQFMIQGGDITNFNGT 87 (426)
Q Consensus 8 ~~~~~~~~~~~~~~~~~G~i~~~l~~~~~P~~~~nf~~l~~~~~~~~~~~k~~~y~~~~f~rv~~~~~iq~G~~~~~~~~ 87 (426)
..+++|.|+|+. |+|+||||++.||+||+||++||+ .+||+|+.||||||+|||||||++ ++|+
T Consensus 9 ~~~~~V~l~T~~-----G~I~ieL~~d~aP~tv~NF~~L~~----------~g~Ydg~~FhRVi~~F~iQgGd~~-~~g~ 72 (203)
T 2k7n_A 9 WQPPNVYLETSM-----GIIVLELYWKHAPKTCKNFAELAR----------RGYYNGTKFHRIIKDFMIQGGDPT-GTGR 72 (203)
T ss_dssp CCCSEEEEEESS-----CEEEEEECTTTCTTHHHHHHHHHH----------HTCGGGCEEEEEETTTEEEEECSS-SSSS
T ss_pred cCCCEEEEEeCC-----CcEEEEEccCCCcHHHHHHHHHHh----------cCccCCCEEEEEeCCcEEEcCCCC-CCCC
Confidence 367899999976 999999999999999999999995 578999999999999999999997 7899
Q ss_pred CCccccCCCcCCcc-ccccCCCCCCCCCCcchhhhhhhhhhcceeeeeeccccCCCCCCCCCCCccccceEEEEeecccc
Q psy6102 88 GGESIYGPCFEDEN-FKLKGIYPKNKYPGIYPSLVKAMFRMLTFTSMVCLFSLGSGLGLGLASTLVGSYQFSCTVSFLNT 166 (426)
Q Consensus 88 ~~~~~~~~~~~~e~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~sqF~i~~~~~~~ 166 (426)
|+.|+||..|++|+ ..++|++ ||+ ||||+. + |+ +++||||||+.
T Consensus 73 gg~si~g~~f~dE~~~~l~h~~-----~G~--------------lsMAn~---g-------pn--sngSQFFIt~~---- 117 (203)
T 2k7n_A 73 GGASIYGKQFEDELHPDLKFTG-----AGI--------------LAMANA---G-------PD--TNGSQFFVTLA---- 117 (203)
T ss_dssp CCCTTSCSCBCCCCCCSSCCCS-----SCE--------------EEEEES---S-------TT--CEEEEEEEESS----
T ss_pred CCCccCCCcccccccccccCCC-----CeE--------------EEEeeC---C-------CC--CcccEEEEEcC----
Confidence 99999999999998 4788988 899 999999 8 99 99999999999
Q ss_pred ccCchhhhhhhhHHHHHHHHhhhhhhhhhhhchhhhhHhhhcchHHHhhhccCCCCccchhHHHHHhhhcccccceechh
Q psy6102 167 FTNNCEIHLQRLNVKLRKIEADLSILEAKHYYNQGALEKKRGITEHKKKLETGRGKEISRKQYRDLVKKKKKKNGIFGCV 246 (426)
Q Consensus 167 ~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~vFG~V 246 (426)
+++ |||+ +|++||+|
T Consensus 118 ---~~~-~LDg-------------------------------------------------------------~~tVFG~V 132 (203)
T 2k7n_A 118 ---PTQ-WLDG-------------------------------------------------------------KHTIFGRV 132 (203)
T ss_dssp ---CCC-SSTT-------------------------------------------------------------TSCEEEEE
T ss_pred ---CCC-ccCC-------------------------------------------------------------CeeEEEEE
Confidence 999 9999 99999999
Q ss_pred hccccHHHHHhhchhh-CCcccccchhhh
Q psy6102 247 RQGFGVAREVSYVEAE-NDKPLVLNQMED 274 (426)
Q Consensus 247 ieGldvl~~I~~l~~~-~~~P~~~i~ilk 274 (426)
++|++++++|+.+++. .++|..++.|.+
T Consensus 133 veGmdvv~kI~~~~t~~~~~P~~~V~I~~ 161 (203)
T 2k7n_A 133 CQGIGMVNRVGMVETNSQDRPVDDVKIIK 161 (203)
T ss_dssp ESCHHHHHHHHSCCEEETTEECCCCBEEE
T ss_pred EcCHHHHHHHHcCCcCCCCCcCCCeEEEE
Confidence 9999999999999984 468887766543
No 30
>1v9t_A Cyclophilin B; beta barrel, isomerase-isomerase inhibitor complex; HET: NIT; 1.70A {Escherichia coli} SCOP: b.62.1.1 PDB: 1j2a_A* 1vai_A* 1clh_A
Probab=100.00 E-value=7.6e-38 Score=278.76 Aligned_cols=154 Identities=26% Similarity=0.360 Sum_probs=129.1
Q ss_pred CCCceEEEEEEECCeeeeeEEEEecCCCChHHHHHHHHhhhCCCCCCCCCccccccCCcccccccccEEeeCccccCCCC
Q psy6102 8 EGNYIVFLDVSIGEEKVGRMVIELFKHIVPKTAENFRALCTGEYGKGKLGKALHFTGSHFHRIIPQFMIQGGDITNFNGT 87 (426)
Q Consensus 8 ~~~~~~~~~~~~~~~~~G~i~~~l~~~~~P~~~~nf~~l~~~~~~~~~~~k~~~y~~~~f~rv~~~~~iq~G~~~~~~~~ 87 (426)
.++++|+|+|+. |+|+||||++.||+||+||++||+ .+||+|+.||||||+|||||||++...
T Consensus 2 ~~~~~v~~~t~~-----G~i~ieL~~~~aP~t~~NF~~L~~----------~g~Y~g~~FhRvi~~f~iQgGd~~~~~-- 64 (166)
T 1v9t_A 2 KGDPHVLLTTSA-----GNIELELDKQKAPVSVQNFVDYVN----------SGFYNNTTFHRVIPGFMIQGGGFTEQM-- 64 (166)
T ss_dssp CCSCEEEEEETT-----EEEEEEECTTTCHHHHHHHHHHHH----------TTTTTTCBEEEEETTTEEEESSBCTTC--
T ss_pred CCCeEEEEEeCC-----ccEEEEEcCCCCcHHHHHHHHHhc----------cCCCCCCEEEEEECCcEEEcCCcCcCC--
Confidence 578999999865 999999999999999999999995 578999999999999999999997432
Q ss_pred CCccccCCCcCCccccccCCCCCCCCCCcchhhhhhhhhhcceeeeeeccccCCCCCCCCCCCccccceEEEEeeccccc
Q psy6102 88 GGESIYGPCFEDENFKLKGIYPKNKYPGIYPSLVKAMFRMLTFTSMVCLFSLGSGLGLGLASTLVGSYQFSCTVSFLNTF 167 (426)
Q Consensus 88 ~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~sqF~i~~~~~~~~ 167 (426)
+.+.+|.+|++|+....|+. +|+ |||||. +. |+ +++||||||+.
T Consensus 65 -~~~~~g~~~~dE~~~~l~~~-----~G~--------------lsmA~~---~~------p~--t~gSQFfI~~~----- 108 (166)
T 1v9t_A 65 -QQKKPNPPIKNEADNGLRNT-----RGT--------------IAMART---AD------KD--SATSQFFINVA----- 108 (166)
T ss_dssp -CBCCCCCCBCCCGGGSCCCC-----TTE--------------EEECCC---SS------TT--CBCSCEEEESS-----
T ss_pred -CCCCCCCcccccccccccCC-----ceE--------------EEEeec---CC------CC--CccceEEEEeC-----
Confidence 23345888999987666666 899 999997 64 89 99999999999
Q ss_pred cCchhhhhhhhHHHHHHHHhhhhhhhhhhhchhhhhHhhhcchHHHhhhccCCCCccchhHHHHHhhhcccccceechhh
Q psy6102 168 TNNCEIHLQRLNVKLRKIEADLSILEAKHYYNQGALEKKRGITEHKKKLETGRGKEISRKQYRDLVKKKKKKNGIFGCVR 247 (426)
Q Consensus 168 ~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~vFG~Vi 247 (426)
+++ |||++ ..+..|++||+|+
T Consensus 109 --~~~-~Ld~~--------------------------------------------------------~~~~~~tvFG~Vv 129 (166)
T 1v9t_A 109 --DNA-FLDHG--------------------------------------------------------QRDFGYAVFGKVV 129 (166)
T ss_dssp --CCG-GGSCC--------------------------------------------------------SSCCCCCEEEEEE
T ss_pred --Ccc-ccCCc--------------------------------------------------------cCcCCeeEEEEEe
Confidence 999 99980 0001499999999
Q ss_pred ccccHHHHHhhchhhC-----Ccccccchhh
Q psy6102 248 QGFGVAREVSYVEAEN-----DKPLVLNQME 273 (426)
Q Consensus 248 eGldvl~~I~~l~~~~-----~~P~~~i~il 273 (426)
+||+++++|+.+++.. ++|..++.|.
T Consensus 130 ~G~dvv~~I~~~~~~~~~~~~~~P~~~v~I~ 160 (166)
T 1v9t_A 130 KGMDVADKISQVPTHDVGPYQNVPSKPVVIL 160 (166)
T ss_dssp ECHHHHHHHHTSCEEEETTEEEEESSCCBEE
T ss_pred cCHHHHHHHHhCCCCCCCccCCCcCCCeEEE
Confidence 9999999999998843 5676665553
No 31
>3bo7_A Peptidyl-prolyl CIS-trans isomerase cyclophilin-T; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, structural G structural genomics consortium, SGC; HET: BMT; 2.35A {Toxoplasma gondii}
Probab=100.00 E-value=1e-37 Score=285.75 Aligned_cols=151 Identities=33% Similarity=0.482 Sum_probs=130.5
Q ss_pred CCCceEEEEEEECCeeeeeEEEEecCCCChHHHHHHHHhhhCCCCCCCCCccccccCCcccccccccEEeeC-----ccc
Q psy6102 8 EGNYIVFLDVSIGEEKVGRMVIELFKHIVPKTAENFRALCTGEYGKGKLGKALHFTGSHFHRIIPQFMIQGG-----DIT 82 (426)
Q Consensus 8 ~~~~~~~~~~~~~~~~~G~i~~~l~~~~~P~~~~nf~~l~~~~~~~~~~~k~~~y~~~~f~rv~~~~~iq~G-----~~~ 82 (426)
..+..|.|+|+. |+|+||||++.||+||+||++||+ .+||+|+.||||+|+|||||| |++
T Consensus 4 ~~~~~v~l~T~~-----G~i~ieL~~~~aP~t~~NF~~L~~----------~g~Ydg~~FhRvi~~f~iQgG~~~~~Dp~ 68 (201)
T 3bo7_A 4 KKKGYLRIVTTQ-----GSLNIELHADMAPRACDSFLRLCA----------VKYFDDTIFHRCIRNFMIQGGRAELRQPS 68 (201)
T ss_dssp -CCEEEEEEETT-----EEEEEEECTTTCHHHHHHHHHHHH----------TTTTTTCBEEEEETTTEEEECCGGGCCC-
T ss_pred CCceEEEEEeCC-----CCEEEEEcCCCCcHHHHHHHHHHh----------cCccCCCEEEEeeCCCEEEcCcccccCCC
Confidence 346788888875 999999999999999999999996 478999999999999999999 987
Q ss_pred cCCCCCCcccc-------CCCcCCcc-ccccCCCCCCCCCCcchhhhhhhhhhcceeeeeeccccCCCCCCCCCCCcccc
Q psy6102 83 NFNGTGGESIY-------GPCFEDEN-FKLKGIYPKNKYPGIYPSLVKAMFRMLTFTSMVCLFSLGSGLGLGLASTLVGS 154 (426)
Q Consensus 83 ~~~~~~~~~~~-------~~~~~~e~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 154 (426)
++|+||.|+| |..|+||. ..++|+. +|+ ||||+. | |+ +++
T Consensus 69 -~~g~gg~si~~~~~~~~g~~f~dE~~~~l~h~~-----~G~--------------lsmA~~---g-------p~--s~g 116 (201)
T 3bo7_A 69 -KKKEVQQSPRSISGFPGGAPFEDEFDNRLVHQG-----IGV--------------LSMAND---G-------KH--SNL 116 (201)
T ss_dssp -------CCSSCCCSSTTCCCBCCCCCTTCCCCS-----TTE--------------EEECCS---S-------TT--CBS
T ss_pred -CCCCCCccccccccccCCCcccCcccCCCCcCC-----CcE--------------EEEeeC---C-------CC--Ccc
Confidence 7899999999 89999995 6788988 899 999999 8 99 999
Q ss_pred ceEEEEeeccccccCchhhhhhhhHHHHHHHHhhhhhhhhhhhchhhhhHhhhcchHHHhhhccCCCCccchhHHHHHhh
Q psy6102 155 YQFSCTVSFLNTFTNNCEIHLQRLNVKLRKIEADLSILEAKHYYNQGALEKKRGITEHKKKLETGRGKEISRKQYRDLVK 234 (426)
Q Consensus 155 sqF~i~~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 234 (426)
||||||+. +++ |||+
T Consensus 117 SQFFIt~~-------~~~-~LDg--------------------------------------------------------- 131 (201)
T 3bo7_A 117 SEFFITFK-------SCE-HLNN--------------------------------------------------------- 131 (201)
T ss_dssp SCEEEESS-------CCG-GGTT---------------------------------------------------------
T ss_pred cEEEEECC-------CCc-ccCC---------------------------------------------------------
Confidence 99999999 999 9999
Q ss_pred hcccccceechhhccccHHHHHhhchhh-CCcccccchhhh
Q psy6102 235 KKKKKNGIFGCVRQGFGVAREVSYVEAE-NDKPLVLNQMED 274 (426)
Q Consensus 235 ~~~~~~~vFG~VieGldvl~~I~~l~~~-~~~P~~~i~ilk 274 (426)
.|++||+|++||+++++|+.+++. .++|..++.|.+
T Consensus 132 ----~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~P~~~i~I~~ 168 (201)
T 3bo7_A 132 ----KHTIFGRVVGGLDVLRQWEKLETDKKDKPLKPPKVEE 168 (201)
T ss_dssp ----TSCEEEEEEECHHHHHHHTTCCBCTTSCBSSCCBEEE
T ss_pred ----CceEEEEEecCHHHHHHHHhCCcCCCCCcCCCeEEEE
Confidence 999999999999999999999984 478887666643
No 32
>2hq6_A Serologically defined colon cancer antigen 10; protein folding, peptidyl-prolyl CIS-trans isomerase, struct genomics; 1.75A {Homo sapiens}
Probab=100.00 E-value=1.8e-37 Score=279.94 Aligned_cols=152 Identities=34% Similarity=0.557 Sum_probs=135.2
Q ss_pred ccCCCceEEEEEEECCeeeeeEEEEecCCCChHHHHHHHHhhhCCCCCCCCCccccccCCcccccccccEEeeCccccCC
Q psy6102 6 CKEGNYIVFLDVSIGEEKVGRMVIELFKHIVPKTAENFRALCTGEYGKGKLGKALHFTGSHFHRIIPQFMIQGGDITNFN 85 (426)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~G~i~~~l~~~~~P~~~~nf~~l~~~~~~~~~~~k~~~y~~~~f~rv~~~~~iq~G~~~~~~ 85 (426)
..+.+++|+|+|+. |+|+||||++.||+||+||++||+ .+||+|+.||||+|+|||||||++ ++
T Consensus 20 ~~~~~~~V~l~T~~-----G~I~ieL~~~~aP~tv~NF~~L~~----------~g~Y~g~~FhRvi~~f~iQgGd~~-~~ 83 (185)
T 2hq6_A 20 EPPTNGKVLLKTTA-----GDIDIELWSKEAPKACRNFIQLCL----------EAYYDNTIFHRVVPGFIVQGGDPT-GT 83 (185)
T ss_dssp CCCCBCEEEEEETT-----EEEEEEEBTTTCHHHHHHHHHHHH----------TTTTTTEECCEEETTTEEEECCTT-SS
T ss_pred CCCCCCEEEEEeCC-----ccEEEEEeCCCCcHHHHHHHHHhh----------cCccCCCEEEEEECCCEEEcCCCC-CC
Confidence 34567899999975 999999999999999999999996 478999999999999999999997 78
Q ss_pred CCCCccccCCCcCCccc-cccCCCCCCCCCCcchhhhhhhhhhcceeeeeeccccCCCCCCCCCCCccccceEEEEeecc
Q psy6102 86 GTGGESIYGPCFEDENF-KLKGIYPKNKYPGIYPSLVKAMFRMLTFTSMVCLFSLGSGLGLGLASTLVGSYQFSCTVSFL 164 (426)
Q Consensus 86 ~~~~~~~~~~~~~~e~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~sqF~i~~~~~ 164 (426)
|+||+++||.+|+||+. .++|++ ||+ |||||. | |+ +++||||||++
T Consensus 84 g~gg~si~g~~~~dE~~~~l~h~~-----~G~--------------lsMA~~---g-------~~--s~gSQFFIt~~-- 130 (185)
T 2hq6_A 84 GSGGESIYGAPFKDEFHSRLRFNR-----RGL--------------VAMANA---G-------SH--DNGSQFFFTLG-- 130 (185)
T ss_dssp SSCCCCTTSSCBCCCCBTTBCSCS-----SSE--------------EEECCS---S-------TT--CBCSCEEEESS--
T ss_pred CCCCCcccCCccccccccCcccCC-----CeE--------------EEEccC---C-------CC--CccceEEEECC--
Confidence 99999999999999986 678888 899 999999 8 89 99999999999
Q ss_pred ccccCchhhhhhhhHHHHHHHHhhhhhhhhhhhchhhhhHhhhcchHHHhhhccCCCCccchhHHHHHhhhcccccceec
Q psy6102 165 NTFTNNCEIHLQRLNVKLRKIEADLSILEAKHYYNQGALEKKRGITEHKKKLETGRGKEISRKQYRDLVKKKKKKNGIFG 244 (426)
Q Consensus 165 ~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~vFG 244 (426)
+++ +||+ +|++||
T Consensus 131 -----~~~-~LDg-------------------------------------------------------------~~tVFG 143 (185)
T 2hq6_A 131 -----RAD-ELNN-------------------------------------------------------------KHTIFG 143 (185)
T ss_dssp -----CCG-GGTT-------------------------------------------------------------TSCEEE
T ss_pred -----CCC-ccCC-------------------------------------------------------------CceEEE
Confidence 999 9999 999999
Q ss_pred hhhccccHH--HHHhhchh-hCCcccccchhhh
Q psy6102 245 CVRQGFGVA--REVSYVEA-ENDKPLVLNQMED 274 (426)
Q Consensus 245 ~VieGldvl--~~I~~l~~-~~~~P~~~i~ilk 274 (426)
+|+ |++++ .+|+.+.+ .+++|..++.|.+
T Consensus 144 ~V~-G~~v~~~~~i~~~~~~~~~~P~~~v~I~~ 175 (185)
T 2hq6_A 144 KVT-GDTVYNMLRLSEVDIDDDERPHNPHKIKS 175 (185)
T ss_dssp EEC-GGGHHHHHHTTCSCBCTTSCBSSCCEEEE
T ss_pred EEE-eCeeehhhHHhhCCcCCCCCCCCCeEEEE
Confidence 998 88764 56777777 5678887766643
No 33
>3bkp_A Cyclophilin; malaria, isomerase, structural GENO structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=1.3e-36 Score=283.31 Aligned_cols=159 Identities=27% Similarity=0.447 Sum_probs=133.8
Q ss_pred ccCCCceEEEEEEECCeeeeeEEEEecCCCChHHHHHHHHhhhCCCCCCCCCccccccCCcccccccccEEeeCccccCC
Q psy6102 6 CKEGNYIVFLDVSIGEEKVGRMVIELFKHIVPKTAENFRALCTGEYGKGKLGKALHFTGSHFHRIIPQFMIQGGDITNFN 85 (426)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~G~i~~~l~~~~~P~~~~nf~~l~~~~~~~~~~~k~~~y~~~~f~rv~~~~~iq~G~~~~~~ 85 (426)
..+..++|+|+|+. |+|+||||++.||+||+||++||+ .+||+|+.||||||+|||||||++ ++
T Consensus 17 ~p~~~~~V~l~T~~-----G~I~ieL~~d~aP~tv~NF~~L~~----------~g~Ydgt~FhRVi~~FmiQgGdp~-~~ 80 (232)
T 3bkp_A 17 QGSTRGKVVLHTSL-----GDLDVELWARECPLACRNFVQLCL----------EGYYVNTIFHRVVKDFIVQGGDPT-GT 80 (232)
T ss_dssp CCSCBCEEEEEETT-----EEEEEEEBTTTCHHHHHHHHHHHH----------HTTTTTCBEEEEETTTEEEECCTT-SS
T ss_pred cCCCCCEEEEEECC-----CcEEEEEcCCCCcHHHHHHHHHhh----------cCccCCCEEEEEeCCCEEEcCCCC-CC
Confidence 34567889999975 999999999999999999999995 478999999999999999999997 78
Q ss_pred CCCCcccc--CCCcCCccc-cccCCCCCCCCCCcchhhhhhhhhhcceeeeeeccccCCCCC-CCCC------CCccccc
Q psy6102 86 GTGGESIY--GPCFEDENF-KLKGIYPKNKYPGIYPSLVKAMFRMLTFTSMVCLFSLGSGLG-LGLA------STLVGSY 155 (426)
Q Consensus 86 ~~~~~~~~--~~~~~~e~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~------~~~~~~s 155 (426)
|+||.|+| |..|+||+. .++|+. +|+ ||||+. |...+ ..|| + +++|
T Consensus 81 G~Gg~si~~~g~~f~dE~~~~l~h~~-----~G~--------------lsMA~~---g~~~~~~~n~e~g~~~~--sngS 136 (232)
T 3bkp_A 81 GRGGADTTFDGKPFDVETHPRLKFRY-----RGL--------------VGVANL---GRSSKDAENDERGRSLG--TNGN 136 (232)
T ss_dssp SSCCCCCTTTTCCBCCCCCTTCCCCS-----TTE--------------EEECCC---C------------------CBCS
T ss_pred CCCCCccccCCCccCCccccCcCcCC-----CeE--------------EEEecc---CCcccccccccccccCC--CcCC
Confidence 99999999 999999985 688888 899 999999 72000 0011 5 8999
Q ss_pred eEEEEeeccccccCchhhhhhhhHHHHHHHHhhhhhhhhhhhchhhhhHhhhcchHHHhhhccCCCCccchhHHHHHhhh
Q psy6102 156 QFSCTVSFLNTFTNNCEIHLQRLNVKLRKIEADLSILEAKHYYNQGALEKKRGITEHKKKLETGRGKEISRKQYRDLVKK 235 (426)
Q Consensus 156 qF~i~~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 235 (426)
|||||++ +++ |||+
T Consensus 137 QFFIt~~-------~~p-~LDg---------------------------------------------------------- 150 (232)
T 3bkp_A 137 QFFITLA-------RAD-VLNN---------------------------------------------------------- 150 (232)
T ss_dssp CEEEESS-------CCG-GGTT----------------------------------------------------------
T ss_pred EEEEECC-------CCc-ccCC----------------------------------------------------------
Confidence 9999999 999 9999
Q ss_pred cccccceechhhccccH--HHHHhhchh-hCCcccccchhhh
Q psy6102 236 KKKKNGIFGCVRQGFGV--AREVSYVEA-ENDKPLVLNQMED 274 (426)
Q Consensus 236 ~~~~~~vFG~VieGldv--l~~I~~l~~-~~~~P~~~i~ilk 274 (426)
+|++||+|+ |+++ +++|+.+++ .+++|..++.|.+
T Consensus 151 ---~~tVFG~Vv-g~~v~~v~kI~~~~t~~~~~P~~~i~I~~ 188 (232)
T 3bkp_A 151 ---AYTLFGKVT-GHTLYNLMKFNDLEVGKEDRPMTPPFIKS 188 (232)
T ss_dssp ---TSCEEEEEC-GGGHHHHHHHTTSCBCGGGCBSSCCBEEE
T ss_pred ---CccEEEEEE-eCchHHHHHHHcCCcCCCCCcCCCeEEEE
Confidence 999999999 7766 789999888 5677877665543
No 34
>1lop_A Cyclophilin A; rotamase, isomerase-isomerase inhibitor complex; HET: NIT; 1.80A {Escherichia coli} SCOP: b.62.1.1 PDB: 2nul_A 2rs4_A
Probab=100.00 E-value=5.2e-37 Score=272.85 Aligned_cols=152 Identities=22% Similarity=0.265 Sum_probs=124.1
Q ss_pred EEEEEEECCeeeeeEEEEecCCCChHHHHHHHHhhhCCCCCCCCCccccccCCcccccccccEEeeCccccCCCCCCccc
Q psy6102 13 VFLDVSIGEEKVGRMVIELFKHIVPKTAENFRALCTGEYGKGKLGKALHFTGSHFHRIIPQFMIQGGDITNFNGTGGESI 92 (426)
Q Consensus 13 ~~~~~~~~~~~~G~i~~~l~~~~~P~~~~nf~~l~~~~~~~~~~~k~~~y~~~~f~rv~~~~~iq~G~~~~~~~~~~~~~ 92 (426)
|.|+|+ .|+|+||||++.||+||+||++||+ .+||+|+.||||||+|||||||++.+. |.++
T Consensus 2 v~l~T~-----~G~i~ieL~~~~aP~t~~NF~~L~~----------~g~Y~g~~FhRvi~~f~iQgGd~~~~~---g~~~ 63 (164)
T 1lop_A 2 VTFHTN-----HGDIVIKTFDDKAPETVKNFLDYCR----------EGFYNNTIFHRVINGFMIQGGGFEPGM---KQKA 63 (164)
T ss_dssp EEEEET-----TEEEEEEECTTTSHHHHHHHHHHHH----------TTTTTTEECCEEETTTEEEESSEETTT---EECC
T ss_pred EEEEeC-----CCCEEEEEeCCCCcHHHHHHHHHHh----------cCCCCCCEEEEEeCCceEecCCcccCC---CcCC
Confidence 566665 5999999999999999999999995 578999999999999999999997433 5667
Q ss_pred cCCCcCCccccccCCCCCCCCCCcchhhhhhhhhhcceeeeeeccccCCCCCCCCCCCccccceEEEEeeccccccCchh
Q psy6102 93 YGPCFEDENFKLKGIYPKNKYPGIYPSLVKAMFRMLTFTSMVCLFSLGSGLGLGLASTLVGSYQFSCTVSFLNTFTNNCE 172 (426)
Q Consensus 93 ~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~sqF~i~~~~~~~~~~~~~ 172 (426)
+|++|+||+....++. ||+ |||||. +. |+ +++||||||+. +++
T Consensus 64 ~g~~~~dE~~~~l~~~-----~G~--------------lsmA~~---~~------p~--s~gSQFfI~~~-------~~~ 106 (164)
T 1lop_A 64 TKEPIKNEANNGLKNT-----RGT--------------LAMART---QA------PH--SATAQFFINVV-------DND 106 (164)
T ss_dssp CCCCBCCCCCSSCCCC-----TTE--------------EEECCC---SS------TT--CBCSCEEEESS-------CCG
T ss_pred CCCccccccccccccC-----ccE--------------EEEeec---CC------CC--CccceEEEEcC-------Ccc
Confidence 8999999986534445 799 999986 43 89 99999999999 899
Q ss_pred hhhhhhHHHHHHHHhhhhhhhhhhhchhhhhHhhhcchHHHhhhccCCCCccchhHHHHHhhhcccccceechhhccccH
Q psy6102 173 IHLQRLNVKLRKIEADLSILEAKHYYNQGALEKKRGITEHKKKLETGRGKEISRKQYRDLVKKKKKKNGIFGCVRQGFGV 252 (426)
Q Consensus 173 ~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~vFG~VieGldv 252 (426)
|||++ ... ..++.|++||+|++||++
T Consensus 107 -~Ld~~-----------------------------------------~~~------------~~~~~~tvFG~Vv~G~dv 132 (164)
T 1lop_A 107 -FLNFS-----------------------------------------GES------------LQGWGYCVFAEVVDGMDE 132 (164)
T ss_dssp -GGSCC-----------------------------------------SSS------------TTTSCCCEEEEEEECHHH
T ss_pred -ccCCc-----------------------------------------ccc------------ccCCceEEEEEEecCHHH
Confidence 99981 000 001259999999999999
Q ss_pred HHHHhhchhh-----CCcccccchhh
Q psy6102 253 AREVSYVEAE-----NDKPLVLNQME 273 (426)
Q Consensus 253 l~~I~~l~~~-----~~~P~~~i~il 273 (426)
+++|+.+++. .++|..++.|.
T Consensus 133 v~~I~~~~t~~~~~~~~~P~~~v~I~ 158 (164)
T 1lop_A 133 VDKIKGVATGRSGMHQDVPKEDVIIE 158 (164)
T ss_dssp HHHHHTSCEEEETTEEEEESSCCEEE
T ss_pred HHHHHhCCcCCccccCCCcCCCeEEE
Confidence 9999999885 36777766553
No 35
>3s6m_A Peptidyl-prolyl CIS-trans isomerase; seattle structural genomics center for infectious disease; 1.65A {Burkholderia pseudomallei} SCOP: b.62.1.1 PDB: 3t1u_A*
Probab=100.00 E-value=2.3e-36 Score=269.71 Aligned_cols=156 Identities=24% Similarity=0.264 Sum_probs=127.5
Q ss_pred CCceEEEEEEECCeeeeeEEEEecCCCChHHHHHHHHhhhCCCCCCCCCccccccCCcccccccccEEeeCccccCCCCC
Q psy6102 9 GNYIVFLDVSIGEEKVGRMVIELFKHIVPKTAENFRALCTGEYGKGKLGKALHFTGSHFHRIIPQFMIQGGDITNFNGTG 88 (426)
Q Consensus 9 ~~~~~~~~~~~~~~~~G~i~~~l~~~~~P~~~~nf~~l~~~~~~~~~~~k~~~y~~~~f~rv~~~~~iq~G~~~~~~~~~ 88 (426)
.++.|.|+|+. |+|+||||++.||+||+||++||+ .+||+|+.||||||+|||||||++...
T Consensus 2 p~~~v~l~T~~-----G~i~ieL~~~~aP~t~~NF~~L~~----------~g~Y~g~~FhRvi~~f~iQgGd~~~~~--- 63 (167)
T 3s6m_A 2 PGSMVELHTNH-----GVIKLELDEAKAPKTVENFLNYVK----------KGHYDGTIFHRVINGFMIQGGGFEPGL--- 63 (167)
T ss_dssp CCCEEEEEETT-----EEEEEEECTTTCHHHHHHHHHHHH----------HTTTTTEECCEEETTTEEEESSEETTT---
T ss_pred CCcEEEEEeCC-----ceEEEEEeCCCCcHHHHHHHHHhh----------hcccCCCEeEEecCCcEEEeccccCCC---
Confidence 36789999875 999999999999999999999995 578999999999999999999997432
Q ss_pred CccccCCCcCCccccccCCCCCCCCCCcchhhhhhhhhhcceeeeeeccccCCCCCCCCCCCccccceEEEEeecccccc
Q psy6102 89 GESIYGPCFEDENFKLKGIYPKNKYPGIYPSLVKAMFRMLTFTSMVCLFSLGSGLGLGLASTLVGSYQFSCTVSFLNTFT 168 (426)
Q Consensus 89 ~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~sqF~i~~~~~~~~~ 168 (426)
+.+.+|.+|++|.....++. ||+ |||||. +. |+ +++||||||+.
T Consensus 64 ~~~~~~~~~~~E~~~~l~~~-----~G~--------------lsmA~~---~~------p~--t~gSQFfI~~~------ 107 (167)
T 3s6m_A 64 KQKPTDAPIANEANNGLKND-----TYT--------------IAMART---ND------PH--SATAQFFINVN------ 107 (167)
T ss_dssp EECCCCCCBCCCGGGCCCCC-----TTE--------------EEECCC---SS------TT--CBCSCEEEESS------
T ss_pred CCCCCCCccCCcccccccCC-----ccE--------------EEEecC---CC------CC--CccceEEEEcC------
Confidence 33456888999975444445 899 999995 43 89 99999999999
Q ss_pred CchhhhhhhhHHHHHHHHhhhhhhhhhhhchhhhhHhhhcchHHHhhhccCCCCccchhHHHHHhhhcccccceechhhc
Q psy6102 169 NNCEIHLQRLNVKLRKIEADLSILEAKHYYNQGALEKKRGITEHKKKLETGRGKEISRKQYRDLVKKKKKKNGIFGCVRQ 248 (426)
Q Consensus 169 ~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~vFG~Vie 248 (426)
+++ |||++ +.+ .+.+.|++||+|++
T Consensus 108 -~~~-~Ld~~------------------------------------------~~~-----------~~~~~~~VFG~Vv~ 132 (167)
T 3s6m_A 108 -DNE-FLNHS------------------------------------------SPT-----------PQGWGYAVFGKVVE 132 (167)
T ss_dssp -CCG-GGSCC------------------------------------------SSS-----------TTTCCCCEEEEEEE
T ss_pred -Cch-hcCCc------------------------------------------ccc-----------cCCCCceEEEEEEc
Confidence 889 99981 000 00014999999999
Q ss_pred cccHHHHHhhchhh-----CCcccccchhh
Q psy6102 249 GFGVAREVSYVEAE-----NDKPLVLNQME 273 (426)
Q Consensus 249 Gldvl~~I~~l~~~-----~~~P~~~i~il 273 (426)
||+++++|+.++++ .++|..++.|.
T Consensus 133 G~dvv~~I~~~~t~~~~~~~~~P~~~v~I~ 162 (167)
T 3s6m_A 133 GQDIVDKIKAVKTGSKGFHQDVPNDDVVIE 162 (167)
T ss_dssp CHHHHHHHTTSCBBC---CBTCBSSCCEEE
T ss_pred CHHHHHHHHcCCcCCCcccCCCcCCCeEEE
Confidence 99999999999985 36888776654
No 36
>3rfy_A Peptidyl-prolyl CIS-trans isomerase CYP38, chloro; cyclophilin, peptidyl prolyl isomerase, ppiase, TLP,; 2.39A {Arabidopsis thaliana}
Probab=99.97 E-value=4.8e-33 Score=273.48 Aligned_cols=152 Identities=21% Similarity=0.188 Sum_probs=126.9
Q ss_pred cccCCCceEEEEEEECC---eeeeeEEEEecCCCChHHHHHHHHhhhCCCCCCCCCccccccCCcccccccccEEeeCcc
Q psy6102 5 ICKEGNYIVFLDVSIGE---EKVGRMVIELFKHIVPKTAENFRALCTGEYGKGKLGKALHFTGSHFHRIIPQFMIQGGDI 81 (426)
Q Consensus 5 ~~~~~~~~~~~~~~~~~---~~~G~i~~~l~~~~~P~~~~nf~~l~~~~~~~~~~~k~~~y~~~~f~rv~~~~~iq~G~~ 81 (426)
.+..++..|.|+|++.. ++.|+|+|+||++.||+||+||++||+ .+||+|+.|||| ++|||||||+
T Consensus 165 P~l~gra~V~m~t~~~~~~~~~~G~I~IeL~~d~AP~Tv~NFl~L~~----------~GfYdGt~FHRV-~gFmIQgGDp 233 (369)
T 3rfy_A 165 PLLKGRASVDMKVKIKDNPNIEDCVFRIVLDGYNAPVTAGNFVDLVE----------RHFYDGMEIQRS-DGFVVQTGDP 233 (369)
T ss_dssp CEECSEEEEEEEEECCSCSSCSEEEEEEEEETTTCHHHHHHHHHHHH----------TTTTTTEECEEE-EEEEECCCCC
T ss_pred ccCCCCeEEEEEEeccCCCcccceEEEEEEeCCCCcHHHHHHHHHhh----------cCCcCCCeeeee-CCeeEecCCC
Confidence 34578899999998764 468999999999999999999999995 588999999999 9999999999
Q ss_pred ccCCCCC---------------------CccccCCCcCCccc-----cccCCCCCCCCCCcchhhhhhhhhhcceeeeee
Q psy6102 82 TNFNGTG---------------------GESIYGPCFEDENF-----KLKGIYPKNKYPGIYPSLVKAMFRMLTFTSMVC 135 (426)
Q Consensus 82 ~~~~~~~---------------------~~~~~~~~~~~e~~-----~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~ 135 (426)
+ ++|+| +.++|+.+|++|++ .++|+. +|+ |||||
T Consensus 234 ~-g~G~G~~~~~~g~~~~iP~E~~~~G~g~piyg~~fedegf~~~~~~L~h~~-----~G~--------------LsMAn 293 (369)
T 3rfy_A 234 E-GPAEGFIDPSTEKTRTVPLEIMVTGEKTPFYGSTLEELGLYKAQVVIPFNA-----FGT--------------MAMAR 293 (369)
T ss_dssp C-CCCSCCCSCCCCCCCSSSSSSCSSSSCCSCCCSSTGGGTEEEEEEEECCCC-----CCC--------------CCCSS
T ss_pred C-CCCCCccCcccCcCcccCccccccCCCCCcCCCccccccccccccccccCC-----Cce--------------EEEee
Confidence 7 56666 56788989999865 677888 899 99999
Q ss_pred ccccCCCCCCCCCCCccccceEEEEeeccccccCchhhhhhhhHHHHHHHHhhhhhhhhhhhchhhhhHhhhcchHHHhh
Q psy6102 136 LFSLGSGLGLGLASTLVGSYQFSCTVSFLNTFTNNCEIHLQRLNVKLRKIEADLSILEAKHYYNQGALEKKRGITEHKKK 215 (426)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~sqF~i~~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (426)
. +++ |+ +++||||||++..+-...+++ |||+
T Consensus 294 s---~~g-----Pn--SngSQFFItl~d~~L~~~~~~-~LDg-------------------------------------- 324 (369)
T 3rfy_A 294 E---EFE-----ND--SGSSQVFWLLKESELTPSNSN-ILDG-------------------------------------- 324 (369)
T ss_dssp C---CCC-----CC--CSSCCCCCCCEEEEECSCCCS-SSCS--------------------------------------
T ss_pred c---CCC-----CC--CccceEEEEecccccCCCCCc-ccCC--------------------------------------
Confidence 6 421 88 999999999951000112577 8999
Q ss_pred hccCCCCccchhHHHHHhhhcccccceechhhccccHHHHHhhc
Q psy6102 216 LETGRGKEISRKQYRDLVKKKKKKNGIFGCVRQGFGVAREVSYV 259 (426)
Q Consensus 216 ~~~~~g~~~~~~~~~~~~~~~~~~~~vFG~VieGldvl~~I~~l 259 (426)
+|++||+|++||+++++|+.-
T Consensus 325 -----------------------kytVFG~VveGmdVVdkI~~G 345 (369)
T 3rfy_A 325 -----------------------RYAVFGYVTDNEDFLADLKVG 345 (369)
T ss_dssp -----------------------CEEEEEEEEESTTGGGGCCTT
T ss_pred -----------------------CeeEEEEEecCHHHHHHHhCC
Confidence 999999999999999999873
No 37
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.86 E-value=1.5e-21 Score=170.97 Aligned_cols=155 Identities=20% Similarity=0.313 Sum_probs=129.9
Q ss_pred chhhhHHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhccc--chhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHH
Q psy6102 270 NQMEDVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQS--QSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAIN 347 (426)
Q Consensus 270 i~ilk~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~--~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~ 347 (426)
....+.+..++.+|+.+++.|+|++|+..|++||++++..... ........++|.+..+|+++|.|++++|+|++|+.
T Consensus 5 ~e~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~ 84 (162)
T 3rkv_A 5 DDKLKSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEE 84 (162)
T ss_dssp ---CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHH
Confidence 3455688999999999999999999999999999986554321 11222234468889999999999999999999999
Q ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcH-HHHHHHHHHHHHHhhHHHHHHHHHHhhhcC
Q psy6102 348 LCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQ-QILKEIAFVRKQMRHHLNLEKMTYARMFQN 424 (426)
Q Consensus 348 ~~~~AL~ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~-~a~~~l~~i~~~l~~~~~a~k~~~~k~f~~ 424 (426)
+|+++|.++|+++++|+++|.+|..+|++++|+.+|++|++++|+++ .+...+..+...+++..++++..|++||++
T Consensus 85 ~~~~al~~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~f~~ 162 (162)
T 3rkv_A 85 TSSEVLKREETNEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAASVVAREMKIVTERRAEKKADSRVTYSKMFQP 162 (162)
T ss_dssp HHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHTTSSCC--------
T ss_pred HHHHHHhcCCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999999999999 889999999999999999999999999974
No 38
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.85 E-value=1.3e-20 Score=159.43 Aligned_cols=116 Identities=26% Similarity=0.434 Sum_probs=112.5
Q ss_pred hhHHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHH
Q psy6102 273 EDVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDI 352 (426)
Q Consensus 273 lk~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~A 352 (426)
++.++.++++|+.+++.|+|++|+..|++||++ +|.++.+|.++|.|+.++|++++|+.+|+++
T Consensus 10 P~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~----------------~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~a 73 (126)
T 4gco_A 10 PELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKR----------------DPENAILYSNRAACLTKLMEFQRALDDCDTC 73 (126)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh----------------CCCCHHHHHHHhhHHHhhccHHHHHHHHHHH
Confidence 457899999999999999999999999999999 9999999999999999999999999999999
Q ss_pred HHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q psy6102 353 LLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVR 404 (426)
Q Consensus 353 L~ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~~~l~~i~ 404 (426)
|+++|+++++|+++|.++..+|++++|+++|++|++++|+|..++..++.|+
T Consensus 74 l~~~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~l~P~~~~a~~~l~~~l 125 (126)
T 4gco_A 74 IRLDSKFIKGYIRKAACLVAMREWSKAQRAYEDALQVDPSNEEAREGVRNCL 125 (126)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHC
T ss_pred HHhhhhhhHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCcCCHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999998774
No 39
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.78 E-value=4.2e-19 Score=156.21 Aligned_cols=138 Identities=7% Similarity=0.083 Sum_probs=118.9
Q ss_pred hhhHHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHH
Q psy6102 272 MEDVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDD 351 (426)
Q Consensus 272 ilk~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~ 351 (426)
....+..++..|+.+++.|+|++|+..|++||++.+.+... +.....|.+..+|.|+|.|+.++|+|++|+.+|++
T Consensus 7 ~~~~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~----~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~k 82 (159)
T 2hr2_A 7 EVVGAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPE----EAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADK 82 (159)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTT----SCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcch----hhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 34578899999999999999999999999999996553211 11122344566999999999999999999999999
Q ss_pred HHHh-------CCCCHHHH----HHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhhHHHH
Q psy6102 352 ILLM-------EPNNVKAL----FRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLNL 413 (426)
Q Consensus 352 AL~l-------dp~~~kal----~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~~~l~~i~~~l~~~~~a 413 (426)
||++ +|+++++| |++|.++..+|++++|+.+|++|++++|++..+...+..+...+....++
T Consensus 83 AL~l~n~~~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d~~~~~~~~~~~~~~~~~~~k 155 (159)
T 2hr2_A 83 ALHYFNRRGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERKGETPGKERMMEVAIDRIAQ 155 (159)
T ss_dssp HHHHHHHHCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCCSCCTTHHHHHHHHHHHHHH
T ss_pred HHHhhhccccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHH
Confidence 9999 99999999 99999999999999999999999999999999988888888776655443
No 40
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.77 E-value=9.9e-18 Score=165.24 Aligned_cols=152 Identities=31% Similarity=0.538 Sum_probs=133.9
Q ss_pred hhhHHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHH
Q psy6102 272 MEDVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDD 351 (426)
Q Consensus 272 ilk~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~ 351 (426)
....+..++.+|+.+++.|+|++|+.+|++|+++.+..... ..+...++.+....+|.++|.|++++|+|++|+.+|++
T Consensus 143 ~p~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~-~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~ 221 (336)
T 1p5q_A 143 KLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSF-SNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNK 221 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCC-CSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhccccC-ChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 34578899999999999999999999999999994332211 11222223344489999999999999999999999999
Q ss_pred HHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhhHHHHHHHHHHhhhcC
Q psy6102 352 ILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLNLEKMTYARMFQN 424 (426)
Q Consensus 352 AL~ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~~~l~~i~~~l~~~~~a~k~~~~k~f~~ 424 (426)
||+++|+++++|+++|.+|..+|++++|+.+|++|++++|++..++..++.++..+++.+++++..|++||..
T Consensus 222 al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~~~a~~~~~~~~~~~ 294 (336)
T 1p5q_A 222 ALELDSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQRIRRQLAREKKLYANMFER 294 (336)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999863
No 41
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.76 E-value=7.1e-18 Score=173.30 Aligned_cols=152 Identities=30% Similarity=0.521 Sum_probs=129.2
Q ss_pred hhhHHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHH
Q psy6102 272 MEDVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDD 351 (426)
Q Consensus 272 ilk~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~ 351 (426)
....+..++.+|+.+++.++|++|+..|.+|+++.+...... .+...++.+....+|+++|.||+++++|++|+.+|++
T Consensus 264 ~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~-~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~ 342 (457)
T 1kt0_A 264 KLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLS-EKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDK 342 (457)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCC-HHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCC-hHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 345788999999999999999999999999999854432111 1222233455589999999999999999999999999
Q ss_pred HHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhhHHHHHHHHHHhhhcC
Q psy6102 352 ILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLNLEKMTYARMFQN 424 (426)
Q Consensus 352 AL~ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~~~l~~i~~~l~~~~~a~k~~~~k~f~~ 424 (426)
||+++|+++++|+++|.+|..+|++++|+.+|++|++++|++..++..++.++..+++++++++..|++||..
T Consensus 343 al~~~p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~~~a~~~~~~~~f~k 415 (457)
T 1kt0_A 343 ALGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQISMCQKKAKEHNERDRRIYANMFKK 415 (457)
T ss_dssp HHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHC---
T ss_pred HHhcCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999964
No 42
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.75 E-value=1.4e-17 Score=150.42 Aligned_cols=156 Identities=26% Similarity=0.412 Sum_probs=120.2
Q ss_pred chhhhHHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHH
Q psy6102 270 NQMEDVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLC 349 (426)
Q Consensus 270 i~ilk~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~ 349 (426)
......+..+..+|+.++..|+|++|+..|.+|+++.+....................++.++|.|++++|++++|+.+|
T Consensus 32 ~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~ 111 (198)
T 2fbn_A 32 EEKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHA 111 (198)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 34556788899999999999999999999999999833211000000000000011389999999999999999999999
Q ss_pred HHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhhHHHHHHHHHHhhhcCC
Q psy6102 350 DDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLNLEKMTYARMFQNG 425 (426)
Q Consensus 350 ~~AL~ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~~~l~~i~~~l~~~~~a~k~~~~k~f~~~ 425 (426)
+++++++|+++.+++++|.++..+|++++|+.+|+++++++|++..++..++.+...+++..++++..|+++|+.+
T Consensus 112 ~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~ 187 (198)
T 2fbn_A 112 SKVLKIDKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYELCVNKLKEARKKDKLTFGGMFDKG 187 (198)
T ss_dssp HHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHC-------------
T ss_pred HHHHHhCcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999754
No 43
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.75 E-value=2.4e-17 Score=137.44 Aligned_cols=117 Identities=21% Similarity=0.303 Sum_probs=112.7
Q ss_pred HHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q psy6102 275 VIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILL 354 (426)
Q Consensus 275 ~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ 354 (426)
.+..++.+|..+++.|+|++|+..|++++++ +|.++.+|.++|.|++++|++++|+.+++++++
T Consensus 3 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~----------------~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~ 66 (126)
T 3upv_A 3 KAEEARLEGKEYFTKSDWPNAVKAYTEMIKR----------------APEDARGYSNRAAALAKLMSFPEAIADCNKAIE 66 (126)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh----------------CCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 5788999999999999999999999999999 999999999999999999999999999999999
Q ss_pred hCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhC------CCcHHHHHHHHHHHHHH
Q psy6102 355 MEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLL------PNDQQILKEIAFVRKQM 407 (426)
Q Consensus 355 ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~------P~n~~a~~~l~~i~~~l 407 (426)
++|+++.+|+++|.++..+|++++|+.+|+++++++ |.+..++..+..+...+
T Consensus 67 ~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~p~~~~~~~~l~~~~~~l 125 (126)
T 3upv_A 67 KDPNFVRAYIRKATAQIAVKEYASALETLDAARTKDAEVNNGSSAREIDQLYYKASQQR 125 (126)
T ss_dssp HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHHC
T ss_pred hCCCcHHHHHHHHHHHHHHhCHHHHHHHHHHHHHhCcccCCchhHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999 99999999999887654
No 44
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.74 E-value=1.6e-17 Score=140.31 Aligned_cols=114 Identities=21% Similarity=0.332 Sum_probs=103.8
Q ss_pred hhHHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHH
Q psy6102 273 EDVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDI 352 (426)
Q Consensus 273 lk~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~A 352 (426)
.+.+..++++|+.+++.|+|++|+.+|++||++ +|.++.+|.++|.||+++|+|++|+.+|+++
T Consensus 5 ~d~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~----------------~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~a 68 (127)
T 4gcn_A 5 TDAAIAEKDLGNAAYKQKDFEKAHVHYDKAIEL----------------DPSNITFYNNKAAVYFEEKKFAECVQFCEKA 68 (127)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh----------------CCCCHHHHHhHHHHHHHhhhHHHHHHHHHHH
Confidence 457889999999999999999999999999999 9999999999999999999999999999999
Q ss_pred HHhCCCC-------HHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHH
Q psy6102 353 LLMEPNN-------VKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFV 403 (426)
Q Consensus 353 L~ldp~~-------~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~~~l~~i 403 (426)
|+++|++ .++|+++|.++..+|++++|+++|++++.++|+ ++....+..+
T Consensus 69 l~~~~~~~~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~kal~~~~~-~~~~~~l~~l 125 (127)
T 4gcn_A 69 VEVGRETRADYKLIAKAMSRAGNAFQKQNDLSLAVQWFHRSLSEFRD-PELVKKVKEL 125 (127)
T ss_dssp HHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCC-HHHHHHHHHH
T ss_pred HHhCcccchhhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcC-HHHHHHHHHh
Confidence 9999876 468999999999999999999999999999985 5555444443
No 45
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.72 E-value=1.5e-16 Score=139.12 Aligned_cols=106 Identities=14% Similarity=0.314 Sum_probs=103.0
Q ss_pred hhHHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHH
Q psy6102 273 EDVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDI 352 (426)
Q Consensus 273 lk~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~A 352 (426)
+..+..++.+|..+++.|+|++|+..|++++.+ +|.++.+|.++|.|+..+|+|++|+.+|+++
T Consensus 33 p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~----------------~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~a 96 (151)
T 3gyz_A 33 DDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIY----------------DFYNVDYIMGLAAIYQIKEQFQQAADLYAVA 96 (151)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh----------------CCCCHHHHHHHHHHHHHHccHHHHHHHHHHH
Confidence 457889999999999999999999999999999 9999999999999999999999999999999
Q ss_pred HHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcH
Q psy6102 353 LLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQ 394 (426)
Q Consensus 353 L~ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~ 394 (426)
++++|+++.+|+++|.||..+|++++|+.+|++|+++.|+.+
T Consensus 97 l~l~P~~~~~~~~lg~~~~~lg~~~eA~~~~~~al~l~~~~~ 138 (151)
T 3gyz_A 97 FALGKNDYTPVFHTGQCQLRLKAPLKAKECFELVIQHSNDEK 138 (151)
T ss_dssp HHHSSSCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHH
T ss_pred HhhCCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCHH
Confidence 999999999999999999999999999999999999999876
No 46
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.72 E-value=3.8e-17 Score=141.90 Aligned_cols=118 Identities=8% Similarity=0.003 Sum_probs=110.4
Q ss_pred HHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q psy6102 275 VIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILL 354 (426)
Q Consensus 275 ~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ 354 (426)
.+..++.+|..|++.|+|++|+.+|++||++ +|.++.+|.++|.++.++|++++|+.+|+++++
T Consensus 30 ~~~~~~~la~~y~~~~~~~~A~~~~~~al~~----------------~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~ 93 (150)
T 4ga2_A 30 KSIKGFYFAKLYYEAKEYDLAKKYICTYINV----------------QERDPKAHRFLGLLYELEENTDKAVECYRRSVE 93 (150)
T ss_dssp HHTTHHHHHHHHHHTTCHHHHHHHHHHHHHH----------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh----------------CCCCHHHHHHHHHHHHHcCchHHHHHHHHHHHH
Confidence 5566789999999999999999999999999 999999999999999999999999999999999
Q ss_pred hCCCCHHHHHHHHHHHHHcCChHHHHHH-HHHHHHhCCCcHHHHHHHHHHHHHHh
Q psy6102 355 MEPNNVKALFRRGRAQVSMNNFEQGLQD-YEQALDLLPNDQQILKEIAFVRKQMR 408 (426)
Q Consensus 355 ldp~~~kal~~lg~a~~~lg~~~~Al~~-l~kAl~l~P~n~~a~~~l~~i~~~l~ 408 (426)
++|+++.+|+++|.+|..+|++++|.+. +++|++++|+++.++..++.+....|
T Consensus 94 ~~p~~~~~~~~la~~~~~~~~~~~aa~~~~~~al~l~P~~~~~~~l~~~ll~~~G 148 (150)
T 4ga2_A 94 LNPTQKDLVLKIAELLCKNDVTDGRAKYWVERAAKLFPGSPAVYKLKEQLLDCEG 148 (150)
T ss_dssp HCTTCHHHHHHHHHHHHHHCSSSSHHHHHHHHHHHHSTTCHHHHHHHHHHHHTCC
T ss_pred hCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHhC
Confidence 9999999999999999999999887776 59999999999999999888876654
No 47
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.71 E-value=1e-16 Score=140.17 Aligned_cols=124 Identities=17% Similarity=0.198 Sum_probs=112.9
Q ss_pred hhhHHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHH
Q psy6102 272 MEDVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDD 351 (426)
Q Consensus 272 ilk~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~ 351 (426)
....+..++.+|..++..|+|++|+.+|.+++++ +|.+..+|+++|.+++++|++++|+.+|++
T Consensus 7 ~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~----------------~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~ 70 (164)
T 3sz7_A 7 PTPESDKLKSEGNAAMARKEYSKAIDLYTQALSI----------------APANPIYLSNRAAAYSASGQHEKAAEDAEL 70 (164)
T ss_dssp CCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----------------STTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred hhhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh----------------CCcCHHHHHHHHHHHHHccCHHHHHHHHHH
Confidence 3457889999999999999999999999999999 999999999999999999999999999999
Q ss_pred HHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHH--HHHHHHHHHHHHhhHH
Q psy6102 352 ILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQ--ILKEIAFVRKQMRHHL 411 (426)
Q Consensus 352 AL~ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~--a~~~l~~i~~~l~~~~ 411 (426)
+++++|+++.+|+++|.+|..+|++++|+.+|+++++++|++.. ....+..+...+++..
T Consensus 71 al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~~~~~ 132 (164)
T 3sz7_A 71 ATVVDPKYSKAWSRLGLARFDMADYKGAKEAYEKGIEAEGNGGSDAMKRGLETTKRKIEEAN 132 (164)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHSSSCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999987 4555555555555443
No 48
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.70 E-value=5.9e-17 Score=140.69 Aligned_cols=124 Identities=13% Similarity=0.043 Sum_probs=112.0
Q ss_pred hccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCH
Q psy6102 281 NSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLMEPNNV 360 (426)
Q Consensus 281 ~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ldp~~~ 360 (426)
.+|..+..++++++|+..|++++.. +|.++..++++|.+|+++|+|++|+++++++|+++|+++
T Consensus 2 ~LG~~~~~~~~~e~ai~~~~~a~~~----------------~p~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~ 65 (150)
T 4ga2_A 2 PLGSMRRSKADVERYIASVQGSTPS----------------PRQKSIKGFYFAKLYYEAKEYDLAKKYICTYINVQERDP 65 (150)
T ss_dssp -----CCCHHHHHHHHHHHHHHSCS----------------HHHHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HhHHHHHHcChHHHHHHHHHHhccc----------------CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Confidence 3688999999999999999999988 788899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhhHHHHHHHHHHh
Q psy6102 361 KALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLNLEKMTYAR 420 (426)
Q Consensus 361 kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~~~l~~i~~~l~~~~~a~k~~~~k 420 (426)
.+|+.+|.+|..+|++++|+.+|+++++++|++..++..++.++..+++..++.+..+++
T Consensus 66 ~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~aa~~~~~~ 125 (150)
T 4ga2_A 66 KAHRFLGLLYELEENTDKAVECYRRSVELNPTQKDLVLKIAELLCKNDVTDGRAKYWVER 125 (150)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCSSSSHHHHHHHH
T ss_pred HHHHHHHHHHHHcCchHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999887665544444
No 49
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.68 E-value=4.2e-16 Score=133.40 Aligned_cols=122 Identities=14% Similarity=0.197 Sum_probs=113.2
Q ss_pred hHHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHH
Q psy6102 274 DVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDIL 353 (426)
Q Consensus 274 k~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL 353 (426)
..+..++.+|..++..|+|++|+..|.+++.. +|.+..+|+++|.++.++|++++|+.+|++++
T Consensus 16 ~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~----------------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al 79 (142)
T 2xcb_A 16 DTLEQLYALGFNQYQAGKWDDAQKIFQALCML----------------DHYDARYFLGLGACRQSLGLYEQALQSYSYGA 79 (142)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHccHHHHHHHHHHHHHh----------------CCccHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 36678899999999999999999999999999 99999999999999999999999999999999
Q ss_pred HhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhhHH
Q psy6102 354 LMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHL 411 (426)
Q Consensus 354 ~ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~~~l~~i~~~l~~~~ 411 (426)
.++|+++.+++.+|.++..+|++++|+..|+++++++|+++........+...+....
T Consensus 80 ~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~l~~l~ 137 (142)
T 2xcb_A 80 LMDINEPRFPFHAAECHLQLGDLDGAESGFYSARALAAAQPAHEALAARAGAMLEAVT 137 (142)
T ss_dssp HHCTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCGGGHHHHHHHHHHHHHHH
T ss_pred hcCCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999877777777766665544
No 50
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.68 E-value=4e-16 Score=135.32 Aligned_cols=119 Identities=13% Similarity=0.169 Sum_probs=109.3
Q ss_pred hHHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHH
Q psy6102 274 DVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDIL 353 (426)
Q Consensus 274 k~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL 353 (426)
..+..++.+|..++..|+|++|+..|.+++.+ +|.+..+|+++|.++..+|++++|+.+|++++
T Consensus 19 ~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~----------------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al 82 (148)
T 2vgx_A 19 DTLEQLYSLAFNQYQSGXYEDAHXVFQALCVL----------------DHYDSRFFLGLGACRQAMGQYDLAIHSYSYGA 82 (148)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHcCChHHHHHHHHHHHHc----------------CcccHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 36778899999999999999999999999999 99999999999999999999999999999999
Q ss_pred HhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHh
Q psy6102 354 LMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMR 408 (426)
Q Consensus 354 ~ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~~~l~~i~~~l~ 408 (426)
.++|+++.+++++|.+|..+|++++|+.+|+++++++|+++........+...+.
T Consensus 83 ~l~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~l~ 137 (148)
T 2vgx_A 83 VMDIXEPRFPFHAAECLLQXGELAEAESGLFLAQELIANXPEFXELSTRVSSMLE 137 (148)
T ss_dssp HHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHH
T ss_pred hcCCCCchHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCCCcchHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999988766555555554443
No 51
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.67 E-value=6.4e-17 Score=159.65 Aligned_cols=156 Identities=27% Similarity=0.409 Sum_probs=96.6
Q ss_pred cchhhhHHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccch-hhhhhhcCcchHHHHHHHHHHHHHccCHHHHHH
Q psy6102 269 LNQMEDVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQS-KTQQKHFRSYYTAALLNMAAVQLKFKAYKRAIN 347 (426)
Q Consensus 269 ~i~ilk~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~-~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~ 347 (426)
.......+..++.+|+.+++.++|++|+.+|.+|+.+.+....... .............+|+++|.|++++++|++|+.
T Consensus 172 ~~~~~~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~ 251 (338)
T 2if4_A 172 VEERIGAADRRKMDGNSLFKEEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIG 251 (338)
T ss_dssp HHHHHHHHHHHHHHHHHTCSSSCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 3445567889999999999999999999999999998322110000 000000000111499999999999999999999
Q ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhhHHHHHHHHHHhhhcC
Q psy6102 348 LCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLNLEKMTYARMFQN 424 (426)
Q Consensus 348 ~~~~AL~ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~~~l~~i~~~l~~~~~a~k~~~~k~f~~ 424 (426)
+|+++|+++|++.++|+++|.+|..+|++++|+.+|++|++++|++..++..+..+........++++..|+++|..
T Consensus 252 ~~~~al~~~p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~~a~~~L~~l~~~~~~~~~~a~~~~~~~l~~ 328 (338)
T 2if4_A 252 HCNIVLTEEEKNPKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDKAIRRELRALAEQEKALYQKQKEMYKGIFKG 328 (338)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC------------------------------------
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 99999999999999999999999999999999999999999999999999999999888888888889999999875
No 52
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.67 E-value=1.9e-15 Score=137.96 Aligned_cols=121 Identities=16% Similarity=0.137 Sum_probs=113.9
Q ss_pred HHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHH----------------HHHHHHH
Q psy6102 275 VIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLN----------------MAAVQLK 338 (426)
Q Consensus 275 ~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~n----------------lA~~~~~ 338 (426)
.+..+...|..++..|+|++|+..|++++++ +|.++.+|+. +|.++.+
T Consensus 3 ~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~----------------~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~ 66 (208)
T 3urz_A 3 SVDEMLQKVSAAIEAGQNGQAVSYFRQTIAL----------------NIDRTEMYYWTNVDKNSEISSKLATELALAYKK 66 (208)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----------------CHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHh----------------CCCChHHHHHhhhcchhhhhHHHHHHHHHHHHH
Confidence 4567889999999999999999999999999 8889999998 9999999
Q ss_pred ccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhhHH
Q psy6102 339 FKAYKRAINLCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHL 411 (426)
Q Consensus 339 lg~~~~Ai~~~~~AL~ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~~~l~~i~~~l~~~~ 411 (426)
+|++++|+..|+++++++|+++.+++.+|.++..+|++++|+.+|+++++++|++..++..++.++...++..
T Consensus 67 ~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~ 139 (208)
T 3urz_A 67 NRNYDKAYLFYKELLQKAPNNVDCLEACAEMQVCRGQEKDALRMYEKILQLEADNLAANIFLGNYYYLTAEQE 139 (208)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHhHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999987665443
No 53
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.66 E-value=1.1e-15 Score=165.49 Aligned_cols=125 Identities=19% Similarity=0.221 Sum_probs=63.8
Q ss_pred hHHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHH
Q psy6102 274 DVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDIL 353 (426)
Q Consensus 274 k~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL 353 (426)
..+..+.++|+.+.++|++++|+.+|++||++ +|.+..+|+++|.+|.++|++++|+++|++||
T Consensus 7 ~~a~al~nLG~~~~~~G~~~eAi~~~~kAl~l----------------~P~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al 70 (723)
T 4gyw_A 7 THADSLNNLANIKREQGNIEEAVRLYRKALEV----------------FPEFAAAHSNLASVLQQQGKLQEALMHYKEAI 70 (723)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----------------CSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh----------------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 34555666666666666666666666666665 44444444444444444444444444444444
Q ss_pred HhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhhHHHHH
Q psy6102 354 LMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLNLE 414 (426)
Q Consensus 354 ~ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~~~l~~i~~~l~~~~~a~ 414 (426)
+++|+++.+|+++|.+|..+|++++|+++|++|++++|++..++.+++.++..+++.++|.
T Consensus 71 ~l~P~~~~a~~nLg~~l~~~g~~~~A~~~~~kAl~l~P~~~~a~~~Lg~~~~~~g~~~eAi 131 (723)
T 4gyw_A 71 RISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAI 131 (723)
T ss_dssp HHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHH
T ss_pred HhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHH
Confidence 4444444444444444444444444444444444444444444444444444444444443
No 54
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.66 E-value=6.9e-16 Score=129.52 Aligned_cols=123 Identities=20% Similarity=0.341 Sum_probs=115.1
Q ss_pred HHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q psy6102 275 VIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILL 354 (426)
Q Consensus 275 ~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ 354 (426)
.+..++.+|..++..|+|++|+..|.+++++ +|.+..+++++|.+++.+|++++|+.+++++++
T Consensus 8 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~----------------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~ 71 (137)
T 3q49_B 8 SAQELKEQGNRLFVGRKYPEAAACYGRAITR----------------NPLVAVYYTNRALCYLKMQQPEQALADCRRALE 71 (137)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhCcHHHHHHHHHHHHhh----------------CcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 5778999999999999999999999999999 899999999999999999999999999999999
Q ss_pred hCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCC-----cHHHHHHHHHHHHHHhhHHHH
Q psy6102 355 MEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPN-----DQQILKEIAFVRKQMRHHLNL 413 (426)
Q Consensus 355 ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~-----n~~a~~~l~~i~~~l~~~~~a 413 (426)
++|+++.+++.+|.++..+|++++|+..|+++++++|+ +..+...+..+........++
T Consensus 72 ~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~e~ 135 (137)
T 3q49_B 72 LDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLNFGDDIPSALRIAKKKRWNSIEE 135 (137)
T ss_dssp HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCCTTHHHHHHHHHHHHHHHHHHT
T ss_pred hCchhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHChhHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999998 788888888887766555543
No 55
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.64 E-value=1.5e-15 Score=139.72 Aligned_cols=126 Identities=14% Similarity=0.124 Sum_probs=107.7
Q ss_pred hhHHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHc-----------cC
Q psy6102 273 EDVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKF-----------KA 341 (426)
Q Consensus 273 lk~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~l-----------g~ 341 (426)
+..+..+..+|..+.+.|++++|+..|++++++ +|.+..++.++|.++.++ |+
T Consensus 36 p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~----------------~P~~~~a~~~lg~~~~~~~~~~~~~~~~~g~ 99 (217)
T 2pl2_A 36 PQDPEALYWLARTQLKLGLVNPALENGKTLVAR----------------TPRYLGGYMVLSEAYVALYRQAEDRERGKGY 99 (217)
T ss_dssp SSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----------------CTTCHHHHHHHHHHHHHHHHTCSSHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh----------------CCCcHHHHHHHHHHHHHhhhhhhhhcccccC
Confidence 345677788888888888888888888888888 888888888888888888 88
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhhHHHHHH
Q psy6102 342 YKRAINLCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLNLEK 415 (426)
Q Consensus 342 ~~~Ai~~~~~AL~ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~~~l~~i~~~l~~~~~a~k 415 (426)
+++|+..++++++++|+++.+++.+|.++..+|++++|+..|++|++++ +++.++..++.++..+++.+++..
T Consensus 100 ~~~A~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-~~~~~~~~la~~~~~~g~~~~A~~ 172 (217)
T 2pl2_A 100 LEQALSVLKDAERVNPRYAPLHLQRGLVYALLGERDKAEASLKQALALE-DTPEIRSALAELYLSMGRLDEALA 172 (217)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHTCHHHHHH
T ss_pred HHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcCChHHHHHHHHHHHhcc-cchHHHHHHHHHHHHcCCHHHHHH
Confidence 8888888888888888888888888888888888888888888888888 888888888888888888888764
No 56
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.64 E-value=1e-14 Score=119.77 Aligned_cols=124 Identities=24% Similarity=0.359 Sum_probs=117.4
Q ss_pred hhhhHHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHH
Q psy6102 271 QMEDVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCD 350 (426)
Q Consensus 271 ~ilk~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~ 350 (426)
.....+..+..+|..++..++|++|+..|.+++.. .|.+..++.++|.++..+|++++|+.++.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~----------------~~~~~~~~~~~a~~~~~~~~~~~A~~~~~ 70 (131)
T 2vyi_A 7 EDSAEAERLKTEGNEQMKVENFEAAVHFYGKAIEL----------------NPANAVYFCNRAAAYSKLGNYAGAVQDCE 70 (131)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred cchhhhHHHHHHHHHHHHccCHHHHHHHHHHHHHc----------------CCCCHHHHHHHHHHHHHhhchHHHHHHHH
Confidence 34457888999999999999999999999999998 88899999999999999999999999999
Q ss_pred HHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhhH
Q psy6102 351 DILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHH 410 (426)
Q Consensus 351 ~AL~ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~~~l~~i~~~l~~~ 410 (426)
+++.++|+++.+++.+|.++..+|++++|+..|+++++++|++..++..++.++..+++.
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~ 130 (131)
T 2vyi_A 71 RAICIDPAYSKAYGRMGLALSSLNKHVEAVAYYKKALELDPDNETYKSNLKIAELKLREA 130 (131)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTTC
T ss_pred HHHhcCccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999999999999999999999887753
No 57
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.62 E-value=1.6e-14 Score=124.38 Aligned_cols=128 Identities=17% Similarity=0.291 Sum_probs=117.5
Q ss_pred hhhHHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHH
Q psy6102 272 MEDVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDD 351 (426)
Q Consensus 272 ilk~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~ 351 (426)
..+.+..+..+|..++..|+|++|+..|.++++. .|.+..++.++|.++..+|++++|+.++++
T Consensus 9 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~----------------~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~ 72 (166)
T 1a17_A 9 ALKRAEELKTQANDYFKAKDYENAIKFYSQAIEL----------------NPSNAIYYGNRSLAYLRTECYGYALGDATR 72 (166)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----------------STTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHh----------------CCCChHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 3457889999999999999999999999999999 899999999999999999999999999999
Q ss_pred HHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHH--HHHHhhHHHHHH
Q psy6102 352 ILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFV--RKQMRHHLNLEK 415 (426)
Q Consensus 352 AL~ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~~~l~~i--~~~l~~~~~a~k 415 (426)
++.++|.++.+++.+|.++..+|++++|+..|+++++++|.+..++..+..+ ....++.+++..
T Consensus 73 a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~~~~~~~~A~~ 138 (166)
T 1a17_A 73 AIELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKIVKQKAFERAIA 138 (166)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999988666666 555666666643
No 58
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.62 E-value=3.6e-15 Score=123.43 Aligned_cols=120 Identities=23% Similarity=0.348 Sum_probs=114.6
Q ss_pred hhHHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHH
Q psy6102 273 EDVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDI 352 (426)
Q Consensus 273 lk~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~A 352 (426)
...+..++.+|..++..|+|++|+..|.++++. .|.+..++.++|.++..+|++++|+.+++++
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~----------------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a 76 (133)
T 2lni_A 13 PDLALMVKNKGNECFQKGDYPQAMKHYTEAIKR----------------NPKDAKLYSNRAACYTKLLEFQLALKDCEEC 76 (133)
T ss_dssp SCHHHHHHHHHHHHHHTTCSHHHHHHHHHHHTT----------------CTTCHHHHHHHHHHHTTTTCHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc----------------CCCcHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 447889999999999999999999999999998 8999999999999999999999999999999
Q ss_pred HHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHh
Q psy6102 353 LLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMR 408 (426)
Q Consensus 353 L~ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~~~l~~i~~~l~ 408 (426)
++++|.+..+++.+|.++..+|++++|+..|+++++++|.+..++..++.++...+
T Consensus 77 ~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~~ 132 (133)
T 2lni_A 77 IQLEPTFIKGYTRKAAALEAMKDYTKAMDVYQKALDLDSSCKEAADGYQRCMMAQY 132 (133)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGTHHHHHHHHHHHHHT
T ss_pred HHhCCCchHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999887654
No 59
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.62 E-value=1.2e-14 Score=117.34 Aligned_cols=115 Identities=21% Similarity=0.289 Sum_probs=110.1
Q ss_pred HHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q psy6102 275 VIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILL 354 (426)
Q Consensus 275 ~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ 354 (426)
.+..+..+|..++..|+|++|+..|.+++.. .|.+..++.++|.++..+|++++|+..+++++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~----------------~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~ 66 (118)
T 1elw_A 3 QVNELKEKGNKALSVGNIDDALQCYSEAIKL----------------DPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVD 66 (118)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----------------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcccHHHHHHHHHHHHHH----------------CCCcHHHHHHHHHHHHhhccHHHHHHHHHHHHH
Confidence 5678999999999999999999999999998 899999999999999999999999999999999
Q ss_pred hCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Q psy6102 355 MEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRK 405 (426)
Q Consensus 355 ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~~~l~~i~~ 405 (426)
++|+++.+++.+|.++..+|++++|+..|+++++++|++..++..++.+..
T Consensus 67 ~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~ 117 (118)
T 1elw_A 67 LKPDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANNPQLKEGLQNMEA 117 (118)
T ss_dssp HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHH
T ss_pred hCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCCCCHHHHHHHHHhhc
Confidence 999999999999999999999999999999999999999999988887753
No 60
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.62 E-value=1.6e-14 Score=127.70 Aligned_cols=146 Identities=13% Similarity=0.173 Sum_probs=117.5
Q ss_pred HHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhccc------------------chhhhhhhcCcchHHHHHHHHHHH
Q psy6102 275 VIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQS------------------QSKTQQKHFRSYYTAALLNMAAVQ 336 (426)
Q Consensus 275 ~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~------------------~~~~~~~~~~p~~~~~~~nlA~~~ 336 (426)
.+..|..+|+.++++|+|++|+..|++|+++.|..... ..........|....++..+|.++
T Consensus 4 ~~~iy~~lG~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (184)
T 3vtx_A 4 TTTIYMDIGDKKRTKGDFDGAIRAYKKVLKADPNNVETLLKLGKTYMDIGLPNDAIESLKKFVVLDTTSAEAYYILGSAN 83 (184)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCchhHHHHHHHHHHH
Confidence 46678899999999999999999999999874332221 002334455677777777777777
Q ss_pred HHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhhHHHHHHH
Q psy6102 337 LKFKAYKRAINLCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLNLEKM 416 (426)
Q Consensus 337 ~~lg~~~~Ai~~~~~AL~ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~~~l~~i~~~l~~~~~a~k~ 416 (426)
...++++.|+..+.+++.++|.+..+++.+|.++..+|++++|++.|+++++++|.+..++..++.++..+++.++|..
T Consensus 84 ~~~~~~~~a~~~~~~a~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~lg~~~~~~g~~~~A~~- 162 (184)
T 3vtx_A 84 FMIDEKQAAIDALQRAIALNTVYADAYYKLGLVYDSMGEHDKAIEAYEKTISIKPGFIRAYQSIGLAYEGKGLRDEAVK- 162 (184)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHH-
T ss_pred HHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhCCchhHHHHHHHHHHhcchhhhHHHHHHHHHHHCCCHHHHHH-
Confidence 7777888888888888888888999999999999999999999999999999999999999999999999999988876
Q ss_pred HHHhh
Q psy6102 417 TYARM 421 (426)
Q Consensus 417 ~~~k~ 421 (426)
.|++.
T Consensus 163 ~~~~a 167 (184)
T 3vtx_A 163 YFKKA 167 (184)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 34433
No 61
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.61 E-value=5.8e-15 Score=159.88 Aligned_cols=125 Identities=15% Similarity=0.219 Sum_probs=120.7
Q ss_pred HHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q psy6102 275 VIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILL 354 (426)
Q Consensus 275 ~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ 354 (426)
.+..+.++|..+.+.|++++|+.+|++||++ +|.+..+|+++|.++.++|++++|+++|++||+
T Consensus 42 ~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l----------------~P~~~~a~~nLg~~l~~~g~~~~A~~~~~kAl~ 105 (723)
T 4gyw_A 42 FAAAHSNLASVLQQQGKLQEALMHYKEAIRI----------------SPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQ 105 (723)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh----------------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 5678999999999999999999999999999 999999999999999999999999999999999
Q ss_pred hCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhhHHHHHH
Q psy6102 355 MEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLNLEK 415 (426)
Q Consensus 355 ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~~~l~~i~~~l~~~~~a~k 415 (426)
++|+++.+|+++|.+|..+|++++|+++|++|++++|++..++.+++.++..+++.+++..
T Consensus 106 l~P~~~~a~~~Lg~~~~~~g~~~eAi~~~~~Al~l~P~~~~a~~~L~~~l~~~g~~~~A~~ 166 (723)
T 4gyw_A 106 INPAFADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDE 166 (723)
T ss_dssp HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCCTTHHH
T ss_pred hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHhhhhhHHHhcccHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999998877654
No 62
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.61 E-value=1.8e-14 Score=132.06 Aligned_cols=129 Identities=17% Similarity=0.188 Sum_probs=119.7
Q ss_pred HHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCc-chHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q psy6102 276 IRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRS-YYTAALLNMAAVQLKFKAYKRAINLCDDILL 354 (426)
Q Consensus 276 a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p-~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ 354 (426)
+..++.+|..++..|+|++|+..|++++++ .| .+..+++++|.|+..+|++++|+.+++++++
T Consensus 7 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~----------------~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~ 70 (228)
T 4i17_A 7 PNQLKNEGNDALNAKNYAVAFEKYSEYLKL----------------TNNQDSVTAYNCGVCADNIKKYKEAADYFDIAIK 70 (228)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----------------TTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhc----------------cCCCCcHHHHHHHHHHHHhhcHHHHHHHHHHHHH
Confidence 478999999999999999999999999999 77 7889999999999999999999999999999
Q ss_pred hCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcH-------HHHHHHHHHHHHHhhHHHHHHHHHHhh
Q psy6102 355 MEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQ-------QILKEIAFVRKQMRHHLNLEKMTYARM 421 (426)
Q Consensus 355 ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~-------~a~~~l~~i~~~l~~~~~a~k~~~~k~ 421 (426)
++|++..+++.+|.++..+|++++|+..|+++++++|++. .++..++.++..+++++++.. .|.+.
T Consensus 71 ~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~-~~~~a 143 (228)
T 4i17_A 71 KNYNLANAYIGKSAAYRDMKNNQEYIATLTEGIKAVPGNATIEKLYAIYYLKEGQKFQQAGNIEKAEE-NYKHA 143 (228)
T ss_dssp TTCSHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHTTCHHHHHH-HHHHH
T ss_pred hCcchHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHhHHHHHhccHHHHHH-HHHHH
Confidence 9999999999999999999999999999999999999999 668889999999999988876 34433
No 63
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.61 E-value=1.4e-14 Score=133.07 Aligned_cols=109 Identities=15% Similarity=0.142 Sum_probs=94.8
Q ss_pred HHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCh
Q psy6102 297 RKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLMEPNNVKALFRRGRAQVSMNNF 376 (426)
Q Consensus 297 ~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ldp~~~kal~~lg~a~~~lg~~ 376 (426)
..+.+|+.. .....+++|.+..++.++|.++..+|++++|+..|+++++++ +++.+++.+|.++..+|++
T Consensus 98 g~~~~A~~~---------~~~al~~~P~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-~~~~~~~~la~~~~~~g~~ 167 (217)
T 2pl2_A 98 GYLEQALSV---------LKDAERVNPRYAPLHLQRGLVYALLGERDKAEASLKQALALE-DTPEIRSALAELYLSMGRL 167 (217)
T ss_dssp HHHHHHHHH---------HHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHTCH
T ss_pred cCHHHHHHH---------HHHHHHhCcccHHHHHHHHHHHHHcCChHHHHHHHHHHHhcc-cchHHHHHHHHHHHHcCCH
Confidence 666677766 577888899999999999999999999999999999999999 9999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhhHHHHHH
Q psy6102 377 EQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLNLEK 415 (426)
Q Consensus 377 ~~Al~~l~kAl~l~P~n~~a~~~l~~i~~~l~~~~~a~k 415 (426)
++|+..|+++++++|++..++..++.++..+++.+++..
T Consensus 168 ~~A~~~~~~al~~~P~~~~~~~~la~~~~~~g~~~~A~~ 206 (217)
T 2pl2_A 168 DEALAQYAKALEQAPKDLDLRVRYASALLLKGKAEEAAR 206 (217)
T ss_dssp HHHHHHHHHHHHHSTTCHHHHHHHHHHHTC---------
T ss_pred HHHHHHHHHHHHhCCCChHHHHHHHHHHHHccCHHHHHH
Confidence 999999999999999999999999999999999988764
No 64
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.60 E-value=6.6e-15 Score=147.98 Aligned_cols=116 Identities=12% Similarity=0.087 Sum_probs=81.8
Q ss_pred HHHHHhccchhhhhhh-HHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q psy6102 276 IRTIKNSGNEYFKLNR-MHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILL 354 (426)
Q Consensus 276 a~~~~~~G~~~f~~g~-y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ 354 (426)
+..|..+|..+...|+ +++|+..|.+||++ +|.+..+|+++|.++..+|++++|+.+|+++|+
T Consensus 131 ~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l----------------~P~~~~a~~~~g~~~~~~g~~~eAl~~~~kal~ 194 (382)
T 2h6f_A 131 YTVWHFRRVLLKSLQKDLHEEMNYITAIIEE----------------QPKNYQVWHHRRVLVEWLRDPSQELEFIADILN 194 (382)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH----------------CTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccCHHHHHHHHHHHHHH----------------CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 4456666666666664 66666666666666 677777777777777777777777777777777
Q ss_pred hCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHH
Q psy6102 355 MEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQM 407 (426)
Q Consensus 355 ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~~~l~~i~~~l 407 (426)
++|++..+|+++|.++..+|++++|+.+|+++++++|++..++..++.++..+
T Consensus 195 ldP~~~~a~~~lg~~~~~~g~~~eAl~~~~~al~l~P~~~~a~~~lg~~l~~l 247 (382)
T 2h6f_A 195 QDAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRNNSVWNQRYFVISNT 247 (382)
T ss_dssp HCTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred hCccCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh
Confidence 77777777777777777777777777777777777777777777777777663
No 65
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.59 E-value=1.9e-14 Score=121.52 Aligned_cols=117 Identities=22% Similarity=0.366 Sum_probs=110.3
Q ss_pred hhHHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcch---HHHHHHHHHHHHHccCHHHHHHHH
Q psy6102 273 EDVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYY---TAALLNMAAVQLKFKAYKRAINLC 349 (426)
Q Consensus 273 lk~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~---~~~~~nlA~~~~~lg~~~~Ai~~~ 349 (426)
...+..++.+|..++..|+|++|+..|.++++. .|.+ ..++.++|.++..++++++|+.++
T Consensus 25 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~----------------~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~ 88 (148)
T 2dba_A 25 ASSVEQLRKEGNELFKCGDYGGALAAYTQALGL----------------DATPQDQAVLHRNRAACHLKLEDYDKAETEA 88 (148)
T ss_dssp CCCHHHHHHHHHHHHTTTCHHHHHHHHHHHHTS----------------CCCHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH----------------cccchHHHHHHHHHHHHHHHHccHHHHHHHH
Confidence 346788999999999999999999999999998 7776 899999999999999999999999
Q ss_pred HHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Q psy6102 350 DDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRK 405 (426)
Q Consensus 350 ~~AL~ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~~~l~~i~~ 405 (426)
++++.++|+++.+++.+|.++..+|++++|+..|+++++++|++..++..+..+..
T Consensus 89 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~ 144 (148)
T 2dba_A 89 SKAIEKDGGDVKALYRRSQALEKLGRLDQAVLDLQRCVSLEPKNKVFQEALRNISG 144 (148)
T ss_dssp HHHHHHTSCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHC
T ss_pred HHHHhhCccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999988877753
No 66
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.59 E-value=5.5e-15 Score=123.62 Aligned_cols=102 Identities=14% Similarity=0.130 Sum_probs=92.8
Q ss_pred HHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC
Q psy6102 278 TIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLMEP 357 (426)
Q Consensus 278 ~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ldp 357 (426)
.++.+|..+++.|++++|+..|.++++. +|.+..+|+++|.++..+|++++|+..++++++++|
T Consensus 19 ~~~~~g~~~~~~g~~~~A~~~~~~al~~----------------~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P 82 (121)
T 1hxi_A 19 NPMEEGLSMLKLANLAEAALAFEAVCQK----------------EPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDP 82 (121)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHH----------------STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred hHHHHHHHHHHcCCHHHHHHHHHHHHHH----------------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 4678899999999999999999999999 999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHH
Q psy6102 358 NNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQ 395 (426)
Q Consensus 358 ~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~ 395 (426)
+++.+++.+|.++..+|++++|+..|+++++++|++..
T Consensus 83 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~P~~~~ 120 (121)
T 1hxi_A 83 KDIAVHAALAVSHTNEHNANAALASLRAWLLSQPQYEQ 120 (121)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-------
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCCCC
Confidence 99999999999999999999999999999999998754
No 67
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.58 E-value=2.6e-14 Score=117.48 Aligned_cols=119 Identities=21% Similarity=0.320 Sum_probs=111.7
Q ss_pred HHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q psy6102 275 VIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILL 354 (426)
Q Consensus 275 ~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ 354 (426)
.+..+..+|..++..|+|++|+.+|.+++.. .|.+..++.++|.++..+|++++|+.++++++.
T Consensus 3 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~----------------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~ 66 (131)
T 1elr_A 3 QALKEKELGNDAYKKKDFDTALKHYDKAKEL----------------DPTNMTYITNQAAVYFEKGDYNKCRELCEKAIE 66 (131)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----------------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc----------------CCccHHHHHHHHHHHHHhccHHHHHHHHHHHHh
Confidence 5678999999999999999999999999999 889999999999999999999999999999999
Q ss_pred hCCCC-------HHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhhH
Q psy6102 355 MEPNN-------VKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHH 410 (426)
Q Consensus 355 ldp~~-------~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~~~l~~i~~~l~~~ 410 (426)
+.|.+ ..+++.+|.++..+|++++|+..|++++++.| +..+...+..+...+++.
T Consensus 67 ~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~ 128 (131)
T 1elr_A 67 VGRENREDYRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAEHR-TPDVLKKCQQAEKILKEQ 128 (131)
T ss_dssp HHHHSTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHHC
T ss_pred hccccchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHHHHh
Confidence 99887 99999999999999999999999999999999 688888888888776654
No 68
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.57 E-value=8.9e-14 Score=122.88 Aligned_cols=77 Identities=14% Similarity=0.213 Sum_probs=73.2
Q ss_pred hhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHH
Q psy6102 319 KHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQ 395 (426)
Q Consensus 319 ~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~ 395 (426)
..+.|.+..++..+|.++.++|++++|+++|+++++++|.++.+|+++|.+|..+|++++|+++|++|++++|+++.
T Consensus 100 ~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~a~ 176 (184)
T 3vtx_A 100 IALNTVYADAYYKLGLVYDSMGEHDKAIEAYEKTISIKPGFIRAYQSIGLAYEGKGLRDEAVKYFKKALEKEEKKAK 176 (184)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTHHHHH
T ss_pred HHhCccchHHHHHHHHHHHHhCCchhHHHHHHHHHHhcchhhhHHHHHHHHHHHCCCHHHHHHHHHHHHhCCccCHH
Confidence 34499999999999999999999999999999999999999999999999999999999999999999999998753
No 69
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.57 E-value=3e-14 Score=118.11 Aligned_cols=115 Identities=14% Similarity=0.107 Sum_probs=105.7
Q ss_pred HHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchH---HHHHHHHHHHHHccCHHHHHHHHHHHHH
Q psy6102 278 TIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYT---AALLNMAAVQLKFKAYKRAINLCDDILL 354 (426)
Q Consensus 278 ~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~---~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ 354 (426)
.++.+|..++..|+|++|+..|.++++. .|.+. .+++.+|.+++++|++++|+..+++++.
T Consensus 4 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~----------------~p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~ 67 (129)
T 2xev_A 4 TAYNVAFDALKNGKYDDASQLFLSFLEL----------------YPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVS 67 (129)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHH----------------CSSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHH----------------CCCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 4678899999999999999999999998 66666 8999999999999999999999999999
Q ss_pred hCCCC---HHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHh
Q psy6102 355 MEPNN---VKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMR 408 (426)
Q Consensus 355 ldp~~---~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~~~l~~i~~~l~ 408 (426)
++|++ +.+++.+|.++..+|++++|+..|++++...|++..+...+..+....+
T Consensus 68 ~~p~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~l~~l~~ 124 (129)
T 2xev_A 68 RYPTHDKAAGGLLKLGLSQYGEGKNTEAQQTLQQVATQYPGSDAARVAQERLQSIRL 124 (129)
T ss_dssp HCTTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTSHHHHHHHHHHHHHC-
T ss_pred HCCCCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHh
Confidence 99999 9999999999999999999999999999999999988887777765543
No 70
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.57 E-value=1e-14 Score=146.53 Aligned_cols=126 Identities=10% Similarity=0.041 Sum_probs=91.5
Q ss_pred hHHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccC-HHHHHHHHHHH
Q psy6102 274 DVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKA-YKRAINLCDDI 352 (426)
Q Consensus 274 k~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~-~~~Ai~~~~~A 352 (426)
..+..+..+|..+...|++++|+..|++||++ +|.+..+|+++|.++..+|+ +++|+.+|+++
T Consensus 95 ~~~~a~~~lg~~~~~~g~~~~Al~~~~~al~l----------------~P~~~~a~~~~g~~l~~~g~d~~eAl~~~~~a 158 (382)
T 2h6f_A 95 KFRDVYDYFRAVLQRDERSERAFKLTRDAIEL----------------NAANYTVWHFRRVLLKSLQKDLHEEMNYITAI 158 (382)
T ss_dssp HHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHH----------------CTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHCCChHHHHHHHHHHHHh----------------CccCHHHHHHHHHHHHHcccCHHHHHHHHHHH
Confidence 35666777777777777777777777777777 77777777777777777775 77777777777
Q ss_pred HHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhhHHHHHH
Q psy6102 353 LLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLNLEK 415 (426)
Q Consensus 353 L~ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~~~l~~i~~~l~~~~~a~k 415 (426)
|+++|+++.+|+++|.++..+|++++|+.+|++|++++|++..++..++.++..+++++++..
T Consensus 159 l~l~P~~~~a~~~~g~~~~~~g~~~eAl~~~~kal~ldP~~~~a~~~lg~~~~~~g~~~eAl~ 221 (382)
T 2h6f_A 159 IEEQPKNYQVWHHRRVLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFKLWDNELQ 221 (382)
T ss_dssp HHHCTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCTTHHH
T ss_pred HHHCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcCChHHHHH
Confidence 777777777777777777777777777777777777777777777777777777776665543
No 71
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.56 E-value=8.4e-15 Score=128.03 Aligned_cols=102 Identities=12% Similarity=0.040 Sum_probs=96.6
Q ss_pred hhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcH
Q psy6102 315 KTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQ 394 (426)
Q Consensus 315 ~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~ 394 (426)
......++|.+..+++++|.+++++|+|++|+..|++++.++|+++.+|+.+|.++..+|++++|+.+|++|++++|+++
T Consensus 25 l~~al~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P~~~ 104 (151)
T 3gyz_A 25 LKDINAIPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDY 104 (151)
T ss_dssp TGGGCCSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSSCC
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCCCCc
Confidence 34455559999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhHHHHHHH
Q psy6102 395 QILKEIAFVRKQMRHHLNLEKM 416 (426)
Q Consensus 395 ~a~~~l~~i~~~l~~~~~a~k~ 416 (426)
.++..++.++..+++.++|...
T Consensus 105 ~~~~~lg~~~~~lg~~~eA~~~ 126 (151)
T 3gyz_A 105 TPVFHTGQCQLRLKAPLKAKEC 126 (151)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHH
Confidence 9999999999999999998763
No 72
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.55 E-value=1.6e-13 Score=111.54 Aligned_cols=117 Identities=24% Similarity=0.424 Sum_probs=111.2
Q ss_pred HHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q psy6102 275 VIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILL 354 (426)
Q Consensus 275 ~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ 354 (426)
.+..+..+|..++..|++++|+..|.++++. .|.+..++.++|.++.+.|++++|+..+++++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~----------------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~ 71 (125)
T 1na0_A 8 SAEAWYNLGNAYYKQGDYDEAIEYYQKALEL----------------DPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALE 71 (125)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH----------------CcCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 4677899999999999999999999999998 888899999999999999999999999999999
Q ss_pred hCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHH
Q psy6102 355 MEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQM 407 (426)
Q Consensus 355 ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~~~l~~i~~~l 407 (426)
++|.+..+++.+|.++..+|++++|+..|+++++++|++..++..++.++...
T Consensus 72 ~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 124 (125)
T 1na0_A 72 LDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQKQ 124 (125)
T ss_dssp HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred hCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999998887654
No 73
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.54 E-value=1.1e-13 Score=116.48 Aligned_cols=97 Identities=14% Similarity=0.131 Sum_probs=93.8
Q ss_pred hcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHH
Q psy6102 320 HFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKE 399 (426)
Q Consensus 320 ~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~~~ 399 (426)
.++|..+..+.++|.++++.|+|++|++.|+++|+++|.++.+|+++|.++..+|++++|+.+|++|++++|++..++..
T Consensus 7 ~inP~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~ 86 (126)
T 4gco_A 7 YINPELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIKGYIR 86 (126)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhhHHHHH
Confidence 45899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhHHHHHHH
Q psy6102 400 IAFVRKQMRHHLNLEKM 416 (426)
Q Consensus 400 l~~i~~~l~~~~~a~k~ 416 (426)
++.++..+++++++...
T Consensus 87 lg~~~~~~~~~~~A~~~ 103 (126)
T 4gco_A 87 KAACLVAMREWSKAQRA 103 (126)
T ss_dssp HHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHH
Confidence 99999999999998763
No 74
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=99.54 E-value=5e-14 Score=123.55 Aligned_cols=107 Identities=21% Similarity=0.369 Sum_probs=97.7
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCH----------HHHHHHHHHHHH
Q psy6102 285 EYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAY----------KRAINLCDDILL 354 (426)
Q Consensus 285 ~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~----------~~Ai~~~~~AL~ 354 (426)
..-+.+.|++|+..|.+|+++ +|.++.+|+++|.++.+++++ ++|+..|++||+
T Consensus 11 ~~~r~~~feeA~~~~~~Ai~l----------------~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ 74 (158)
T 1zu2_A 11 EFDRILLFEQIRQDAENTYKS----------------NPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALL 74 (158)
T ss_dssp SHHHHHHHHHHHHHHHHHHHH----------------CTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhHHHHHHHHHHHHHHH----------------CCCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHH
Confidence 445678899999999999999 999999999999999999875 599999999999
Q ss_pred hCCCCHHHHHHHHHHHHHcC-----------ChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHH
Q psy6102 355 MEPNNVKALFRRGRAQVSMN-----------NFEQGLQDYEQALDLLPNDQQILKEIAFVRKQM 407 (426)
Q Consensus 355 ldp~~~kal~~lg~a~~~lg-----------~~~~Al~~l~kAl~l~P~n~~a~~~l~~i~~~l 407 (426)
++|++.++|+++|.+|..+| ++++|+++|++|++++|++...+..+..+.+..
T Consensus 75 ldP~~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~~~y~~al~~~~ka~ 138 (158)
T 1zu2_A 75 IDPKKDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQPDNTHYLKSLEMTAKAP 138 (158)
T ss_dssp HCTTCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHTHH
T ss_pred hCcCcHHHHHHHHHHHHHhcccCcchhhhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHhCH
Confidence 99999999999999999885 899999999999999999998888877665543
No 75
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.54 E-value=1.4e-13 Score=126.02 Aligned_cols=118 Identities=15% Similarity=0.179 Sum_probs=113.1
Q ss_pred HHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC
Q psy6102 277 RTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLME 356 (426)
Q Consensus 277 ~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ld 356 (426)
..++.+|..++..|+|++|+..|.+|++. +|.+..++.++|.++..+|++++|+..++++++++
T Consensus 43 ~~~~~~~~~~~~~~~~~~A~~~~~~al~~----------------~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~ 106 (228)
T 4i17_A 43 VTAYNCGVCADNIKKYKEAADYFDIAIKK----------------NYNLANAYIGKSAAYRDMKNNQEYIATLTEGIKAV 106 (228)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHT----------------TCSHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHhhcHHHHHHHHHHHHHh----------------CcchHHHHHHHHHHHHHcccHHHHHHHHHHHHHHC
Confidence 56777999999999999999999999998 99999999999999999999999999999999999
Q ss_pred CCCH-------HHHHHHHHHHHHcCChHHHHHHHHHHHHhCCC--cHHHHHHHHHHHHHHhhH
Q psy6102 357 PNNV-------KALFRRGRAQVSMNNFEQGLQDYEQALDLLPN--DQQILKEIAFVRKQMRHH 410 (426)
Q Consensus 357 p~~~-------kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~--n~~a~~~l~~i~~~l~~~ 410 (426)
|++. .+|+.+|.++..+|++++|++.|++|++++|+ +..++..++.++...++.
T Consensus 107 p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~~~~ 169 (228)
T 4i17_A 107 PGNATIEKLYAIYYLKEGQKFQQAGNIEKAEENYKHATDVTSKKWKTDALYSLGVLFYNNGAD 169 (228)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHHhHHHHHhccHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHHHHHHH
Confidence 9999 77999999999999999999999999999999 999999999999888776
No 76
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.52 E-value=3.8e-14 Score=146.39 Aligned_cols=126 Identities=17% Similarity=0.304 Sum_probs=116.4
Q ss_pred hHHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHH
Q psy6102 274 DVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDIL 353 (426)
Q Consensus 274 k~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL 353 (426)
+.+..++.+|+.+++.|+|++|+.+|++|+++ +|.+..+|.++|.++.++|++++|++++++|+
T Consensus 4 ~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~~----------------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al 67 (477)
T 1wao_1 4 KRAEELKTQANDYFKAKDYENAIKFYSQAIEL----------------NPSNAIYYGNRSLAYLRTECYGYALGDATRAI 67 (477)
T ss_dssp HHHTTSSSSSSSTTTTTCHHHHHHHHHHHHHH----------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh----------------CCccHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 45677899999999999999999999999999 99999999999999999999999999999999
Q ss_pred HhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHH--HHHHhhHHHHHH
Q psy6102 354 LMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFV--RKQMRHHLNLEK 415 (426)
Q Consensus 354 ~ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~~~l~~i--~~~l~~~~~a~k 415 (426)
+++|+++.+++++|.+|..+|++++|++.|++|++++|++..++..++.+ +...+++++|..
T Consensus 68 ~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~l~~~~~~~~~g~~~~A~~ 131 (477)
T 1wao_1 68 ELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKIVKQKAFERAIA 131 (477)
T ss_dssp HSCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCTTHHHHHHHHHHHHHHHHHCCC--
T ss_pred HhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999988 555566665544
No 77
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.51 E-value=6.6e-13 Score=108.78 Aligned_cols=124 Identities=20% Similarity=0.321 Sum_probs=117.8
Q ss_pred HHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC
Q psy6102 277 RTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLME 356 (426)
Q Consensus 277 ~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ld 356 (426)
..+..+|..++..|++++|+..|.++++. .|.+..++..+|.++...|++++|+..+++++.+.
T Consensus 2 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~----------------~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~ 65 (136)
T 2fo7_A 2 EAWYNLGNAYYKQGDYDEAIEYYQKALEL----------------DPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELD 65 (136)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHH----------------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred cHHHHHHHHHHHcCcHHHHHHHHHHHHHc----------------CCcchhHHHHHHHHHHHhcCHHHHHHHHHHHHHHC
Confidence 45788899999999999999999999998 88889999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhhHHHHHHH
Q psy6102 357 PNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLNLEKM 416 (426)
Q Consensus 357 p~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~~~l~~i~~~l~~~~~a~k~ 416 (426)
|.+..+++.+|.++...|++++|+..+++++.+.|.+..++..++.++...++.+++...
T Consensus 66 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~ 125 (136)
T 2fo7_A 66 PRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEY 125 (136)
T ss_dssp TTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHH
T ss_pred CCchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHccHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999888653
No 78
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.50 E-value=3.3e-13 Score=121.74 Aligned_cols=124 Identities=16% Similarity=0.175 Sum_probs=112.3
Q ss_pred hHHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHH
Q psy6102 274 DVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDIL 353 (426)
Q Consensus 274 k~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL 353 (426)
..+..++.+|..++..|+|++|+..|.+++ ++ ++.+++++|.++.++|++++|+.++++++
T Consensus 4 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~------------------~~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al 64 (213)
T 1hh8_A 4 VEAISLWNEGVLAADKKDWKGALDAFSAVQ------------------DP-HSRICFNIGCMYTILKNMTEAEKAFTRSI 64 (213)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHTSS------------------SC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHc------------------CC-ChHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 355678899999999999999999999884 23 46799999999999999999999999999
Q ss_pred HhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcH----------------HHHHHHHHHHHHHhhHHHHHHH
Q psy6102 354 LMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQ----------------QILKEIAFVRKQMRHHLNLEKM 416 (426)
Q Consensus 354 ~ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~----------------~a~~~l~~i~~~l~~~~~a~k~ 416 (426)
.++|.++.+++++|.++..+|++++|+.+|++++++.|.+. .++..++.++..+++.+++...
T Consensus 65 ~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~ 143 (213)
T 1hh8_A 65 NRDKHLAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQ 143 (213)
T ss_dssp HHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HhCccchHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHHccCHHHHHHH
Confidence 99999999999999999999999999999999999888877 9999999999999999888753
No 79
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.48 E-value=8.6e-14 Score=133.32 Aligned_cols=103 Identities=22% Similarity=0.368 Sum_probs=100.0
Q ss_pred HHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q psy6102 275 VIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILL 354 (426)
Q Consensus 275 ~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ 354 (426)
.+..++.+|+.++..|+|++|+..|++|++. +|.+..+|.++|.++.++|++++|+.+++++++
T Consensus 3 ~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~----------------~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~ 66 (281)
T 2c2l_A 3 SAQELKEQGNRLFVGRKYPEAAACYGRAITR----------------NPLVAVYYTNRALCYLKMQQPEQALADCRRALE 66 (281)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----------------CSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh----------------CCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 4678899999999999999999999999999 999999999999999999999999999999999
Q ss_pred hCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCc
Q psy6102 355 MEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPND 393 (426)
Q Consensus 355 ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n 393 (426)
++|++..+++++|.+|..+|++++|+..|+++++++|++
T Consensus 67 ~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~ 105 (281)
T 2c2l_A 67 LDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQ 105 (281)
T ss_dssp SCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccc
Confidence 999999999999999999999999999999999999976
No 80
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.48 E-value=1e-13 Score=114.36 Aligned_cols=105 Identities=14% Similarity=0.093 Sum_probs=90.2
Q ss_pred hhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q psy6102 288 KLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLMEPNNVKALFRRG 367 (426)
Q Consensus 288 ~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ldp~~~kal~~lg 367 (426)
..|++++|+..|++|+++.. -+|.+..++.++|.++.++|++++|+..++++++++|+++.+++++|
T Consensus 2 ~~g~~~~A~~~~~~al~~~~-------------~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~ 68 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIASGL-------------QGKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQALRVFYA 68 (117)
T ss_dssp -----CCCHHHHHHHHSSCC-------------CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHcCC-------------CCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchHHHHHHH
Confidence 36889999999999998610 02788999999999999999999999999999999999999999999
Q ss_pred HHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Q psy6102 368 RAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRK 405 (426)
Q Consensus 368 ~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~~~l~~i~~ 405 (426)
.++..+|++++|+..|++++.+.|+++.+......+..
T Consensus 69 ~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~ai~~ 106 (117)
T 3k9i_A 69 MVLYNLGRYEQGVELLLKIIAETSDDETIQSYKQAILF 106 (117)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHHCCCHHHHHTHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Confidence 99999999999999999999999999987765555443
No 81
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.48 E-value=1.4e-12 Score=113.20 Aligned_cols=124 Identities=19% Similarity=0.297 Sum_probs=119.4
Q ss_pred HHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Q psy6102 276 IRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLM 355 (426)
Q Consensus 276 a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~l 355 (426)
+..+..+|..++..|++++|+..|.++++. .|.+..++.++|.++...|++++|+..+++++.+
T Consensus 42 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~----------------~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~ 105 (186)
T 3as5_A 42 VDVALHLGIAYVKTGAVDRGTELLERSLAD----------------APDNVKVATVLGLTYVQVQKYDLAVPLLIKVAEA 105 (186)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----------------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHhc----------------CCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Confidence 567889999999999999999999999998 8899999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhhHHHHHH
Q psy6102 356 EPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLNLEK 415 (426)
Q Consensus 356 dp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~~~l~~i~~~l~~~~~a~k 415 (426)
+|.+..+++.+|.++..+|++++|+..|++++++.|.+..++..++.++...++.+++..
T Consensus 106 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~ 165 (186)
T 3as5_A 106 NPINFNVRFRLGVALDNLGRFDEAIDSFKIALGLRPNEGKVHRAIAFSYEQMGRHEEALP 165 (186)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred CcHhHHHHHHHHHHHHHcCcHHHHHHHHHHHHhcCccchHHHHHHHHHHHHcCCHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999988865
No 82
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.48 E-value=4.8e-13 Score=137.71 Aligned_cols=124 Identities=15% Similarity=0.130 Sum_probs=118.8
Q ss_pred HHHHHhccchhhhh---------hhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHc-------
Q psy6102 276 IRTIKNSGNEYFKL---------NRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKF------- 339 (426)
Q Consensus 276 a~~~~~~G~~~f~~---------g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~l------- 339 (426)
...+..+|..++.. |+|++|+..|.+|+++ +|.+..+|+++|.++..+
T Consensus 170 ~~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~----------------~p~~~~~~~~lg~~~~~~~~~~~~~ 233 (474)
T 4abn_A 170 KVSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQM----------------DVLDGRSWYILGNAYLSLYFNTGQN 233 (474)
T ss_dssp HHHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHH----------------CTTCHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHh----------------CCCCHHHHHHHHHHHHHHHHhhccc
Confidence 36788899999999 9999999999999999 999999999999999999
Q ss_pred -cCHHHHHHHHHHHHHhCC---CCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhhHHHHHH
Q psy6102 340 -KAYKRAINLCDDILLMEP---NNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLNLEK 415 (426)
Q Consensus 340 -g~~~~Ai~~~~~AL~ldp---~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~~~l~~i~~~l~~~~~a~k 415 (426)
|++++|+.+|+++++++| .++.+|+++|.+|..+|++++|++.|++|++++|++..++..++.++..+++.+++..
T Consensus 234 ~g~~~~A~~~~~~al~~~p~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~a~~~l~~~~~~lg~~~eAi~ 313 (474)
T 4abn_A 234 PKISQQALSAYAQAEKVDRKASSNPDLHLNRATLHKYEESYGEALEGFSQAAALDPAWPEPQQREQQLLEFLSRLTSLLE 313 (474)
T ss_dssp HHHHHHHHHHHHHHHHHCGGGGGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999 9999999999999999999999999999999999999999999999999999888763
No 83
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.48 E-value=4.1e-13 Score=122.41 Aligned_cols=109 Identities=17% Similarity=0.178 Sum_probs=93.1
Q ss_pred HHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC
Q psy6102 278 TIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLMEP 357 (426)
Q Consensus 278 ~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ldp 357 (426)
....+|..+++.|+|++|+..|++++++ +|.++.++.++|.++..+|++++|+.+|+++++++|
T Consensus 56 ~~~~lg~~~~~~g~~~~A~~~~~~al~~----------------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P 119 (208)
T 3urz_A 56 LATELALAYKKNRNYDKAYLFYKELLQK----------------APNNVDCLEACAEMQVCRGQEKDALRMYEKILQLEA 119 (208)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH----------------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHH----------------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCC
Confidence 3455999999999999999999999999 999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHc-----------------------------------CChHHHHHHHHHHHHhCCCcHHHHHHHHH
Q psy6102 358 NNVKALFRRGRAQVSM-----------------------------------NNFEQGLQDYEQALDLLPNDQQILKEIAF 402 (426)
Q Consensus 358 ~~~kal~~lg~a~~~l-----------------------------------g~~~~Al~~l~kAl~l~P~n~~a~~~l~~ 402 (426)
+++.+|+++|.+|+.+ |++++|+.+|++|++++|++. +...+..
T Consensus 120 ~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~~-~~~~l~~ 198 (208)
T 3urz_A 120 DNLAANIFLGNYYYLTAEQEKKKLETDYKKLSSPTKMQYARYRDGLSKLFTTRYEKARNSLQKVILRFPSTE-AQKTLDK 198 (208)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTTSCCHH-HHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCCchhHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCHH-HHHHHHH
Confidence 9999998888877543 457788888888888888643 3333444
Q ss_pred H
Q psy6102 403 V 403 (426)
Q Consensus 403 i 403 (426)
+
T Consensus 199 i 199 (208)
T 3urz_A 199 I 199 (208)
T ss_dssp H
T ss_pred H
Confidence 3
No 84
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.47 E-value=1.2e-12 Score=120.35 Aligned_cols=141 Identities=12% Similarity=0.172 Sum_probs=124.4
Q ss_pred HHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhccc----------chhhhhhhcCcchHHHHHHHHHHHHHccCHHH
Q psy6102 275 VIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQS----------QSKTQQKHFRSYYTAALLNMAAVQLKFKAYKR 344 (426)
Q Consensus 275 ~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~----------~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~ 344 (426)
.+..+..+|..+...|++++|+..|.+++++.+..... ..........|.+..++.++|.++...|++++
T Consensus 78 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (258)
T 3uq3_A 78 ISKSFARIGNAYHKLGDLKKTIEYYQKSLTEHRTADILTKLRNAEKELKKAEAEAYVNPEKAEEARLEGKEYFTKSDWPN 157 (258)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCchhHHHHHHhHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHhcCHHH
Confidence 47789999999999999999999999999853211000 11233444689999999999999999999999
Q ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhhHHHHHH
Q psy6102 345 AINLCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLNLEK 415 (426)
Q Consensus 345 Ai~~~~~AL~ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~~~l~~i~~~l~~~~~a~k 415 (426)
|+..++++++++|.++.+++.+|.++..+|++++|+..|+++++++|++..++..++.++..+++.+++..
T Consensus 158 A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~ 228 (258)
T 3uq3_A 158 AVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQIAVKEYASALE 228 (258)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHhcCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999988865
No 85
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.46 E-value=2.2e-13 Score=108.80 Aligned_cols=102 Identities=9% Similarity=0.038 Sum_probs=97.5
Q ss_pred HHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Q psy6102 276 IRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLM 355 (426)
Q Consensus 276 a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~l 355 (426)
+..+..+|..++..|+|++|+..|.++++. .|.+..++.++|.++..+|++++|+.++++++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~----------------~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~ 69 (112)
T 2kck_A 6 PEEYYLEGVLQYDAGNYTESIDLFEKAIQL----------------DPEESKYWLMKGKALYNLERYEEAVDCYNYVINV 69 (112)
T ss_dssp TTGGGGHHHHHHSSCCHHHHHHHHHHHHHH----------------CCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHh----------------CcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Confidence 345778999999999999999999999999 8999999999999999999999999999999999
Q ss_pred CCC--CHHHHHHHHHHHHHc-CChHHHHHHHHHHHHhCCCc
Q psy6102 356 EPN--NVKALFRRGRAQVSM-NNFEQGLQDYEQALDLLPND 393 (426)
Q Consensus 356 dp~--~~kal~~lg~a~~~l-g~~~~Al~~l~kAl~l~P~n 393 (426)
+|. +..+++.+|.++..+ |++++|++++++++...|.+
T Consensus 70 ~~~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~p~~ 110 (112)
T 2kck_A 70 IEDEYNKDVWAAKADALRYIEGKEVEAEIAEARAKLEHHHH 110 (112)
T ss_dssp SCCTTCHHHHHHHHHHHTTCSSCSHHHHHHHHHHGGGCCCC
T ss_pred CcccchHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhcccCC
Confidence 999 999999999999999 99999999999999999976
No 86
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.46 E-value=2.5e-13 Score=117.50 Aligned_cols=94 Identities=13% Similarity=0.129 Sum_probs=92.2
Q ss_pred CcchHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHH
Q psy6102 322 RSYYTAALLNMAAVQLKFKAYKRAINLCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIA 401 (426)
Q Consensus 322 ~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~~~l~ 401 (426)
+|.+..+++++|.++++.|++++|+..+++++.++|.++.+|+.+|.++..+|++++|+.+|++|+.++|+++.++..++
T Consensus 17 ~p~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg 96 (148)
T 2vgx_A 17 SSDTLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMGQYDLAIHSYSYGAVMDIXEPRFPFHAA 96 (148)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHH
T ss_pred CHhhHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCchHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhHHHHHH
Q psy6102 402 FVRKQMRHHLNLEK 415 (426)
Q Consensus 402 ~i~~~l~~~~~a~k 415 (426)
.++..+++.+++..
T Consensus 97 ~~~~~~g~~~~A~~ 110 (148)
T 2vgx_A 97 ECLLQXGELAEAES 110 (148)
T ss_dssp HHHHHTTCHHHHHH
T ss_pred HHHHHcCCHHHHHH
Confidence 99999999998875
No 87
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.46 E-value=6.5e-13 Score=116.82 Aligned_cols=120 Identities=10% Similarity=0.034 Sum_probs=94.0
Q ss_pred HhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC
Q psy6102 280 KNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLMEPNN 359 (426)
Q Consensus 280 ~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ldp~~ 359 (426)
...+..++..|++++|+..|.++++. +|.+..+|..+|.++..+|++++|+..+++++.++|.+
T Consensus 14 ~~~~~~~~~~~~~~~A~~~~~~al~~----------------~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~ 77 (177)
T 2e2e_A 14 RDPLHQFASQQNPEAQLQALQDKIRA----------------NPQNSEQWALLGEYYLWQNDYSNSLLAYRQALQLRGEN 77 (177)
T ss_dssp STTTCCCC-----CCCCHHHHHHHHH----------------CCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSC
T ss_pred hhhhhhhhhccCHHHHHHHHHHHHHh----------------CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCC
Confidence 34556677788888888888888887 78888888888888888888888888888888888888
Q ss_pred HHHHHHHHHH-HHHcCCh--HHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhhHHHHHH
Q psy6102 360 VKALFRRGRA-QVSMNNF--EQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLNLEK 415 (426)
Q Consensus 360 ~kal~~lg~a-~~~lg~~--~~Al~~l~kAl~l~P~n~~a~~~l~~i~~~l~~~~~a~k 415 (426)
+.+++.+|.+ +...|++ ++|+..|+++++++|++..++..++.++...++++++..
T Consensus 78 ~~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~ 136 (177)
T 2e2e_A 78 AELYAALATVLYYQASQHMTAQTRAMIDKALALDSNEITALMLLASDAFMQANYAQAIE 136 (177)
T ss_dssp HHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcccHHHHHH
Confidence 8888888888 7788887 888888888888888888888888888888888877765
No 88
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.45 E-value=2.7e-12 Score=119.49 Aligned_cols=125 Identities=15% Similarity=0.097 Sum_probs=114.4
Q ss_pred hHHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHH
Q psy6102 274 DVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDIL 353 (426)
Q Consensus 274 k~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL 353 (426)
..+..+..+|..++..|++++|+..|.++++. .|.+..++.++|.++..+|++++|+..+++++
T Consensus 41 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~----------------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al 104 (275)
T 1xnf_A 41 ERAQLLYERGVLYDSLGLRALARNDFSQALAI----------------RPDMPEVFNYLGIYLTQAGNFDAAYEAFDSVL 104 (275)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----------------CCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHcccHHHHHHHHHHHHHc----------------CCCcHHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 46788999999999999999999999999999 89999999999999999999999999999999
Q ss_pred HhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhhHHHHHH
Q psy6102 354 LMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLNLEK 415 (426)
Q Consensus 354 ~ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~~~l~~i~~~l~~~~~a~k 415 (426)
+++|.++.+++.+|.++..+|++++|+..|+++++++|++......+..+ ...++.+++..
T Consensus 105 ~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~-~~~~~~~~A~~ 165 (275)
T 1xnf_A 105 ELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPNDPFRSLWLYLA-EQKLDEKQAKE 165 (275)
T ss_dssp HHCTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH-HHHHCHHHHHH
T ss_pred hcCccccHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCChHHHHHHHHH-HHhcCHHHHHH
Confidence 99999999999999999999999999999999999999998776666544 44566666654
No 89
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.45 E-value=7.7e-13 Score=123.97 Aligned_cols=130 Identities=14% Similarity=0.167 Sum_probs=117.6
Q ss_pred HHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcch---HHHHHHHHHHHHHccCHHHHHHHHHH
Q psy6102 275 VIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYY---TAALLNMAAVQLKFKAYKRAINLCDD 351 (426)
Q Consensus 275 ~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~---~~~~~nlA~~~~~lg~~~~Ai~~~~~ 351 (426)
.+..++.+|..+++.|+|++|+..|.++++. .|.+ ..+++.+|.|++++|+|++|+..+++
T Consensus 14 ~~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~----------------~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~ 77 (261)
T 3qky_A 14 SPQEAFERAMEFYNQGKYDRAIEYFKAVFTY----------------GRTHEWAADAQFYLARAYYQNKEYLLAASEYER 77 (261)
T ss_dssp SHHHHHHHHHHHHHTTCHHHHHHHHHHHGGG----------------CSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh----------------CCCCcchHHHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 5678999999999999999999999999998 6777 99999999999999999999999999
Q ss_pred HHHhCCCC---HHHHHHHHHHHHH--------cCChHHHHHHHHHHHHhCCCcHHHH-----------------HHHHHH
Q psy6102 352 ILLMEPNN---VKALFRRGRAQVS--------MNNFEQGLQDYEQALDLLPNDQQIL-----------------KEIAFV 403 (426)
Q Consensus 352 AL~ldp~~---~kal~~lg~a~~~--------lg~~~~Al~~l~kAl~l~P~n~~a~-----------------~~l~~i 403 (426)
++++.|++ ..+++.+|.++.. +|++++|+..|+++++++|++..+. ..++.+
T Consensus 78 ~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~~~~~~~~~~~~~~~la~~ 157 (261)
T 3qky_A 78 FIQIYQIDPRVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHELVDDATQKIRELRAKLARKQYEAARL 157 (261)
T ss_dssp HHHHCTTCTTHHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHCCCCchhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998854 7899999999999 9999999999999999999987666 777999
Q ss_pred HHHHhhHHHHHHHHHHhh
Q psy6102 404 RKQMRHHLNLEKMTYARM 421 (426)
Q Consensus 404 ~~~l~~~~~a~k~~~~k~ 421 (426)
+...++++++.. .|++.
T Consensus 158 ~~~~g~~~~A~~-~~~~~ 174 (261)
T 3qky_A 158 YERRELYEAAAV-TYEAV 174 (261)
T ss_dssp HHHTTCHHHHHH-HHHHH
T ss_pred HHHccCHHHHHH-HHHHH
Confidence 999999988875 34443
No 90
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.44 E-value=1.4e-12 Score=136.53 Aligned_cols=126 Identities=13% Similarity=0.112 Sum_probs=120.7
Q ss_pred HHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q psy6102 275 VIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILL 354 (426)
Q Consensus 275 ~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ 354 (426)
.+..+..+|..++..|+|++|+..|++|+++ +|.+..++.++|.++..+|++++|++.++++++
T Consensus 22 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~----------------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 85 (568)
T 2vsy_A 22 DFVAWLMLADAELGMGDTTAGEMAVQRGLAL----------------HPGHPEAVARLGRVRWTQQRHAEAAVLLQQASD 85 (568)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHTT----------------STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh----------------CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHh
Confidence 4578999999999999999999999999998 899999999999999999999999999999999
Q ss_pred hCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHH---hhHHHHHHH
Q psy6102 355 MEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQM---RHHLNLEKM 416 (426)
Q Consensus 355 ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~~~l~~i~~~l---~~~~~a~k~ 416 (426)
++|++..+++++|.++..+|++++|++.|+++++++|++..++..++.++..+ ++.+++...
T Consensus 86 ~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~g~~~~A~~~ 150 (568)
T 2vsy_A 86 AAPEHPGIALWLGHALEDAGQAEAAAAAYTRAHQLLPEEPYITAQLLNWRRRLCDWRALDVLSAQ 150 (568)
T ss_dssp HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCTTHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhccccHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999 888877653
No 91
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.44 E-value=1e-12 Score=115.51 Aligned_cols=115 Identities=15% Similarity=0.199 Sum_probs=105.6
Q ss_pred HHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHH-HHHccCH--HHHHHHHHH
Q psy6102 275 VIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAV-QLKFKAY--KRAINLCDD 351 (426)
Q Consensus 275 ~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~-~~~lg~~--~~Ai~~~~~ 351 (426)
.+..+..+|..++..|+|++|+.+|.+++++ .|.+..++.++|.+ +...|++ ++|+..+++
T Consensus 43 ~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~----------------~p~~~~~~~~la~~l~~~~~~~~~~~A~~~~~~ 106 (177)
T 2e2e_A 43 NSEQWALLGEYYLWQNDYSNSLLAYRQALQL----------------RGENAELYAALATVLYYQASQHMTAQTRAMIDK 106 (177)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----------------HCSCHHHHHHHHHHHHHHTTTCCCHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc----------------CCCCHHHHHHHHHHHHHhcCCcchHHHHHHHHH
Confidence 4567899999999999999999999999999 88899999999999 8899999 999999999
Q ss_pred HHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Q psy6102 352 ILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRK 405 (426)
Q Consensus 352 AL~ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~~~l~~i~~ 405 (426)
+++++|++..+++.+|.++..+|++++|+..|+++++++|++......+..+..
T Consensus 107 al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~i~~ 160 (177)
T 2e2e_A 107 ALALDSNEITALMLLASDAFMQANYAQAIELWQKVMDLNSPRINRTQLVESINM 160 (177)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTSCHHHHHHHHHH
T ss_pred HHHhCCCcHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCccHHHHHHHHHH
Confidence 999999999999999999999999999999999999999998766555544443
No 92
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.44 E-value=4.4e-12 Score=115.74 Aligned_cols=124 Identities=14% Similarity=0.180 Sum_probs=98.1
Q ss_pred HHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Q psy6102 276 IRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLM 355 (426)
Q Consensus 276 a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~l 355 (426)
+..+..+|..++..|++++|+..|.++++. .|.+..++..+|.++.++|++++|+..+++++++
T Consensus 91 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~----------------~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~ 154 (243)
T 2q7f_A 91 ATAYYGAGNVYVVKEMYKEAKDMFEKALRA----------------GMENGDLFYMLGTVLVKLEQPKLALPYLQRAVEL 154 (243)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----------------TCCSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhccHHHHHHHHHHHHHh----------------CCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Confidence 455666667777777777777777777666 7777888888888888888888888888888888
Q ss_pred CCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhhHHHHHH
Q psy6102 356 EPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLNLEK 415 (426)
Q Consensus 356 dp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~~~l~~i~~~l~~~~~a~k 415 (426)
+|.+..+++.+|.++..+|++++|+..|++++.++|++..++..++.++...++.+++..
T Consensus 155 ~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~ 214 (243)
T 2q7f_A 155 NENDTEARFQFGMCLANEGMLDEALSQFAAVTEQDPGHADAFYNAGVTYAYKENREKALE 214 (243)
T ss_dssp CTTCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCTTHHHH
T ss_pred CCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHccCHHHHHH
Confidence 888888888888888888888888888888888888888888888888888887777754
No 93
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.43 E-value=1.8e-12 Score=112.58 Aligned_cols=126 Identities=13% Similarity=0.115 Sum_probs=120.0
Q ss_pred HHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q psy6102 275 VIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILL 354 (426)
Q Consensus 275 ~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ 354 (426)
.+..+..+|..++..|++++|+..|.++++. .|.+..++..+|.++...|++++|+..++++++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~ 70 (186)
T 3as5_A 7 RQVYYRDKGISHAKAGRYSQAVMLLEQVYDA----------------DAFDVDVALHLGIAYVKTGAVDRGTELLERSLA 70 (186)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHTTTCCT----------------TSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHhcCHHHHHHHHHHHHHh----------------CccChHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 5677889999999999999999999999987 888999999999999999999999999999999
Q ss_pred hCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhhHHHHHHH
Q psy6102 355 MEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLNLEKM 416 (426)
Q Consensus 355 ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~~~l~~i~~~l~~~~~a~k~ 416 (426)
++|.+..+++.+|.++...|++++|+..|++++.++|.+..++..++.++...++.+++...
T Consensus 71 ~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~ 132 (186)
T 3as5_A 71 DAPDNVKVATVLGLTYVQVQKYDLAVPLLIKVAEANPINFNVRFRLGVALDNLGRFDEAIDS 132 (186)
T ss_dssp HCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcHhHHHHHHHHHHHHHcCcHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999888653
No 94
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.43 E-value=2.8e-12 Score=120.07 Aligned_cols=133 Identities=14% Similarity=0.133 Sum_probs=115.6
Q ss_pred HHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHH--------ccCHHHHH
Q psy6102 275 VIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLK--------FKAYKRAI 346 (426)
Q Consensus 275 ~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~--------lg~~~~Ai 346 (426)
.+..++.+|..+++.|+|++|+..|+++++..+. ++....+++++|.+++. +|++++|+
T Consensus 51 ~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~-------------~~~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~ 117 (261)
T 3qky_A 51 AADAQFYLARAYYQNKEYLLAASEYERFIQIYQI-------------DPRVPQAEYERAMCYYKLSPPYELDQTDTRKAI 117 (261)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-------------CTTHHHHHHHHHHHHHHHCCCTTSCCHHHHHHH
T ss_pred hHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCC-------------CchhHHHHHHHHHHHHHhcccccccchhHHHHH
Confidence 4678999999999999999999999999998322 34668899999999999 99999999
Q ss_pred HHHHHHHHhCCCCHHHH-----------------HHHHHHHHHcCChHHHHHHHHHHHHhCCC---cHHHHHHHHHHHHH
Q psy6102 347 NLCDDILLMEPNNVKAL-----------------FRRGRAQVSMNNFEQGLQDYEQALDLLPN---DQQILKEIAFVRKQ 406 (426)
Q Consensus 347 ~~~~~AL~ldp~~~kal-----------------~~lg~a~~~lg~~~~Al~~l~kAl~l~P~---n~~a~~~l~~i~~~ 406 (426)
..++++++++|++..+. +.+|.+|..+|++++|+..|+++++..|+ ...++..++.++..
T Consensus 118 ~~~~~~l~~~p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~ 197 (261)
T 3qky_A 118 EAFQLFIDRYPNHELVDDATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAVFDAYPDTPWADDALVGAMRAYIA 197 (261)
T ss_dssp HHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHH
Confidence 99999999999986665 99999999999999999999999999998 56799999999987
Q ss_pred H----------hhHHHHHHHHHHhh
Q psy6102 407 M----------RHHLNLEKMTYARM 421 (426)
Q Consensus 407 l----------~~~~~a~k~~~~k~ 421 (426)
+ ++.+++.. .|++.
T Consensus 198 ~g~~~~~~~~~~~~~~A~~-~~~~~ 221 (261)
T 3qky_A 198 YAEQSVRARQPERYRRAVE-LYERL 221 (261)
T ss_dssp HHHTSCGGGHHHHHHHHHH-HHHHH
T ss_pred hcccchhhcccchHHHHHH-HHHHH
Confidence 7 56566543 44443
No 95
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.43 E-value=4.2e-12 Score=122.07 Aligned_cols=120 Identities=26% Similarity=0.387 Sum_probs=109.7
Q ss_pred HHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchH----HHHHHHHHHHHHccCHHHHHHHHHH
Q psy6102 276 IRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYT----AALLNMAAVQLKFKAYKRAINLCDD 351 (426)
Q Consensus 276 a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~----~~~~nlA~~~~~lg~~~~Ai~~~~~ 351 (426)
.......|..++..|++++|+..|.++++. .|.+. .++..+|.++.++|++++|+..+++
T Consensus 234 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~----------------~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~ 297 (359)
T 3ieg_A 234 LNKLIESAEELIRDGRYTDATSKYESVMKT----------------EPSVAEYTVRSKERICHCFSKDEKPVEAIRICSE 297 (359)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----------------CCSSHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhc----------------CCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHH
Confidence 344567799999999999999999999998 56655 4577899999999999999999999
Q ss_pred HHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhhHH
Q psy6102 352 ILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHL 411 (426)
Q Consensus 352 AL~ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~~~l~~i~~~l~~~~ 411 (426)
+++++|+++.+++.+|.++..+|++++|+.+|+++++++|++..++..+..+...+++.+
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~~~~~~ 357 (359)
T 3ieg_A 298 VLQMEPDNVNALKDRAEAYLIEEMYDEAIQDYEAAQEHNENDQQIREGLEKAQRLLKQSQ 357 (359)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHhCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999999999988877654
No 96
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.43 E-value=3.6e-13 Score=144.94 Aligned_cols=129 Identities=12% Similarity=0.062 Sum_probs=119.9
Q ss_pred HHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q psy6102 275 VIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILL 354 (426)
Q Consensus 275 ~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ 354 (426)
.+..+..+|..+++.|+|++|+..|+++++. +|.+..+|+++|.+++++|++++|+.+|++|++
T Consensus 432 ~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~----------------~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~ 495 (681)
T 2pzi_A 432 SVELPLMEVRALLDLGDVAKATRKLDDLAER----------------VGWRWRLVWYRAVAELLTGDYDSATKHFTEVLD 495 (681)
T ss_dssp CSHHHHHHHHHHHHHTCHHHHHHHHHHHHHH----------------HCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHhcCCHHHHHHHHHHHhcc----------------CcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 4567899999999999999999999999999 899999999999999999999999999999999
Q ss_pred hCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhhHHHHHHHHHHhh
Q psy6102 355 MEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLNLEKMTYARM 421 (426)
Q Consensus 355 ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~~~l~~i~~~l~~~~~a~k~~~~k~ 421 (426)
++|+++.+|+++|.++..+|++++ +++|++|++++|++..++.+++.++..++++++|.. .|++.
T Consensus 496 l~P~~~~~~~~lg~~~~~~g~~~~-~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~-~~~~a 560 (681)
T 2pzi_A 496 TFPGELAPKLALAATAELAGNTDE-HKFYQTVWSTNDGVISAAFGLARARSAEGDRVGAVR-TLDEV 560 (681)
T ss_dssp HSTTCSHHHHHHHHHHHHHTCCCT-TCHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHH-HHHTS
T ss_pred hCCCChHHHHHHHHHHHHcCChHH-HHHHHHHHHhCCchHHHHHHHHHHHHHcCCHHHHHH-HHHhh
Confidence 999999999999999999999999 999999999999999999999999999999998875 44443
No 97
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.43 E-value=2.1e-12 Score=126.16 Aligned_cols=124 Identities=11% Similarity=0.116 Sum_probs=109.0
Q ss_pred HHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcc--hHHHHHHHHHHHHHccCHHHHHHHHHHHH
Q psy6102 276 IRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSY--YTAALLNMAAVQLKFKAYKRAINLCDDIL 353 (426)
Q Consensus 276 a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~--~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL 353 (426)
+..+..+|..+...|++++|+..|.++++. .|. ++.++.++|.++.++|++++|+..+++++
T Consensus 177 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~----------------~p~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al 240 (365)
T 4eqf_A 177 PGLTRRMSKSPVDSSVLEGVKELYLEAAHQ----------------NGDMIDPDLQTGLGVLFHLSGEFNRAIDAFNAAL 240 (365)
T ss_dssp ------------CCHHHHHHHHHHHHHHHH----------------SCSSCCHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHhhhhhHHHHHHHHHHHHHh----------------CcCccCHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 445567799999999999999999999999 788 89999999999999999999999999999
Q ss_pred HhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhhHHHHHH
Q psy6102 354 LMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLNLEK 415 (426)
Q Consensus 354 ~ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~~~l~~i~~~l~~~~~a~k 415 (426)
+++|+++.+|+.+|.++..+|++++|+..|+++++++|++..++..++.++..+++++++..
T Consensus 241 ~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~ 302 (365)
T 4eqf_A 241 TVRPEDYSLWNRLGATLANGDRSEEAVEAYTRALEIQPGFIRSRYNLGISCINLGAYREAVS 302 (365)
T ss_dssp HHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCHHHHH
T ss_pred HhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999988865
No 98
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.43 E-value=3.6e-12 Score=116.38 Aligned_cols=124 Identities=18% Similarity=0.138 Sum_probs=84.8
Q ss_pred HHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Q psy6102 276 IRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLM 355 (426)
Q Consensus 276 a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~l 355 (426)
+..+..+|..++..|++++|+..|.++++. .|.+..++..+|.++..+|++++|+..+++++++
T Consensus 57 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~----------------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~ 120 (243)
T 2q7f_A 57 AIPYINFANLLSSVNELERALAFYDKALEL----------------DSSAATAYYGAGNVYVVKEMYKEAKDMFEKALRA 120 (243)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHc----------------CCcchHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Confidence 445666666666677777777777777666 6666666777777777777777777777777777
Q ss_pred CCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhhHHHHHH
Q psy6102 356 EPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLNLEK 415 (426)
Q Consensus 356 dp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~~~l~~i~~~l~~~~~a~k 415 (426)
+|.+..+++.+|.++..+|++++|+..|++++++.|++..++..++.++...++.+++..
T Consensus 121 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~ 180 (243)
T 2q7f_A 121 GMENGDLFYMLGTVLVKLEQPKLALPYLQRAVELNENDTEARFQFGMCLANEGMLDEALS 180 (243)
T ss_dssp TCCSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHcCCHHHHHH
Confidence 776677777777777777777777777777777777666666666666666666665543
No 99
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.42 E-value=1.2e-12 Score=134.87 Aligned_cols=124 Identities=11% Similarity=0.002 Sum_probs=119.8
Q ss_pred HHHHHHhccchhhhhhhH-HHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHH
Q psy6102 275 VIRTIKNSGNEYFKLNRM-HDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDIL 353 (426)
Q Consensus 275 ~a~~~~~~G~~~f~~g~y-~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL 353 (426)
.+..++.+|..++..++| ++|+.+|++|+++ +|.+..+|+++|.+|.++|++++|+.+|++++
T Consensus 101 ~a~~~~~lg~~~~~~g~~~~~A~~~~~~al~~----------------~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al 164 (474)
T 4abn_A 101 EAQALMLKGKALNVTPDYSPEAEVLLSKAVKL----------------EPELVEAWNQLGEVYWKKGDVTSAHTCFSGAL 164 (474)
T ss_dssp CHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHH----------------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhccccHHHHHHHHHHHHhh----------------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 578899999999999999 9999999999999 99999999999999999999999999999999
Q ss_pred HhCCCCHHHHHHHHHHHHHc---------CChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHH--------hhHHHHHH
Q psy6102 354 LMEPNNVKALFRRGRAQVSM---------NNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQM--------RHHLNLEK 415 (426)
Q Consensus 354 ~ldp~~~kal~~lg~a~~~l---------g~~~~Al~~l~kAl~l~P~n~~a~~~l~~i~~~l--------~~~~~a~k 415 (426)
+++|+ ..+++++|.++..+ |++++|++.|++|++++|++..++..++.++..+ ++++++..
T Consensus 165 ~~~p~-~~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~ 242 (474)
T 4abn_A 165 THCKN-KVSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLDGRSWYILGNAYLSLYFNTGQNPKISQQALS 242 (474)
T ss_dssp TTCCC-HHHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred hhCCC-HHHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhccccchHHHHHH
Confidence 99999 79999999999999 9999999999999999999999999999999999 88888865
No 100
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.42 E-value=1.3e-12 Score=127.08 Aligned_cols=125 Identities=10% Similarity=0.118 Sum_probs=115.4
Q ss_pred HHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q psy6102 275 VIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILL 354 (426)
Q Consensus 275 ~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ 354 (426)
.+..+..+|..++..|++++|+..|++++++ .|.+..++.++|.++.++|++++|+..++++++
T Consensus 216 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~----------------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~ 279 (368)
T 1fch_A 216 DPDVQCGLGVLFNLSGEYDKAVDCFTAALSV----------------RPNDYLLWNKLGATLANGNQSEEAVAAYRRALE 279 (368)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh----------------CcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 3567888999999999999999999999998 888999999999999999999999999999999
Q ss_pred hCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCc-----------HHHHHHHHHHHHHHhhHHHHHH
Q psy6102 355 MEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPND-----------QQILKEIAFVRKQMRHHLNLEK 415 (426)
Q Consensus 355 ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n-----------~~a~~~l~~i~~~l~~~~~a~k 415 (426)
++|+++.+++.+|.++..+|++++|+..|++++++.|++ ..++..++.++..+++.+++.+
T Consensus 280 ~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~ 351 (368)
T 1fch_A 280 LQPGYIRSRYNLGISCINLGAHREAVEHFLEALNMQRKSRGPRGEGGAMSENIWSTLRLALSMLGQSDAYGA 351 (368)
T ss_dssp HCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTC------CCCCCHHHHHHHHHHHHHHTCGGGHHH
T ss_pred hCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCCCccccccchhhHHHHHHHHHHHHhCChHhHHH
Confidence 999999999999999999999999999999999999988 8999999999999998887764
No 101
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.42 E-value=2e-12 Score=118.73 Aligned_cols=114 Identities=20% Similarity=0.312 Sum_probs=108.7
Q ss_pred hHHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHH
Q psy6102 274 DVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDIL 353 (426)
Q Consensus 274 k~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL 353 (426)
..+..+..+|..++..|+|++|+..|+++++. .|.+..++.++|.++.++|++++|+..+++++
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~----------------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al 200 (258)
T 3uq3_A 137 EKAEEARLEGKEYFTKSDWPNAVKAYTEMIKR----------------APEDARGYSNRAAALAKLMSFPEAIADCNKAI 200 (258)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc----------------CcccHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 35678899999999999999999999999999 89999999999999999999999999999999
Q ss_pred HhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhC------CCcHHHHHHHHHH
Q psy6102 354 LMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLL------PNDQQILKEIAFV 403 (426)
Q Consensus 354 ~ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~------P~n~~a~~~l~~i 403 (426)
+++|+++.+++.+|.++..+|++++|+..|+++++++ |.+..++..+..+
T Consensus 201 ~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~p~~~~~~~~l~~~ 256 (258)
T 3uq3_A 201 EKDPNFVRAYIRKATAQIAVKEYASALETLDAARTKDAEVNNGSSAREIDQLYYKA 256 (258)
T ss_dssp HHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHT
T ss_pred HhCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhChhhcCCCchHHHHHHHHHh
Confidence 9999999999999999999999999999999999999 9999988887765
No 102
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.42 E-value=6.3e-12 Score=112.93 Aligned_cols=124 Identities=14% Similarity=0.070 Sum_probs=98.7
Q ss_pred HHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHc-cCHHHHHHHHHHHHH
Q psy6102 276 IRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKF-KAYKRAINLCDDILL 354 (426)
Q Consensus 276 a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~l-g~~~~Ai~~~~~AL~ 354 (426)
+..+..+|..+...|++++|+..|.++++. .|.+..++.++|.++..+ |++++|+..++++++
T Consensus 42 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~----------------~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~ 105 (225)
T 2vq2_A 42 ELAWLVRAEIYQYLKVNDKAQESFRQALSI----------------KPDSAEINNNYGWFLCGRLNRPAESMAYFDKALA 105 (225)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----------------CTTCHHHHHHHHHHHHTTTCCHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHcCChHHHHHHHHHHHHh----------------CCCChHHHHHHHHHHHHhcCcHHHHHHHHHHHHc
Confidence 345566666666666666666666666666 777888888888888888 888888888888888
Q ss_pred --hCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhhHHHHHH
Q psy6102 355 --MEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLNLEK 415 (426)
Q Consensus 355 --ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~~~l~~i~~~l~~~~~a~k 415 (426)
.+|.+..+++.+|.++..+|++++|+..|++++++.|.+..++..++.++...++.+++..
T Consensus 106 ~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~ 168 (225)
T 2vq2_A 106 DPTYPTPYIANLNKGICSAKQGQFGLAEAYLKRSLAAQPQFPPAFKELARTKMLAGQLGDADY 168 (225)
T ss_dssp STTCSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHH
T ss_pred CcCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHcCCHHHHHH
Confidence 6667788888888888888888888888888888888888888888888888888877765
No 103
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.41 E-value=2.2e-12 Score=126.09 Aligned_cols=125 Identities=11% Similarity=0.148 Sum_probs=117.4
Q ss_pred HHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q psy6102 275 VIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILL 354 (426)
Q Consensus 275 ~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ 354 (426)
.+..+..+|..+...|++++|+..|.++++. .|.+..+|.++|.++.++|++++|+..++++++
T Consensus 212 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~----------------~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~ 275 (365)
T 4eqf_A 212 DPDLQTGLGVLFHLSGEFNRAIDAFNAALTV----------------RPEDYSLWNRLGATLANGDRSEEAVEAYTRALE 275 (365)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH----------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHh----------------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 3567889999999999999999999999999 899999999999999999999999999999999
Q ss_pred hCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCC------------cHHHHHHHHHHHHHHhhHHHHHH
Q psy6102 355 MEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPN------------DQQILKEIAFVRKQMRHHLNLEK 415 (426)
Q Consensus 355 ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~------------n~~a~~~l~~i~~~l~~~~~a~k 415 (426)
++|+++.+++.+|.++..+|++++|+..|+++++++|+ +..++..++.+...+++.+.+.+
T Consensus 276 ~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~a~~ 348 (365)
T 4eqf_A 276 IQPGFIRSRYNLGISCINLGAYREAVSNFLTALSLQRKSRNQQQVPHPAISGNIWAALRIALSLMDQPELFQA 348 (365)
T ss_dssp HCTTCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHCC------------CHHHHHHHHHHHHHTCHHHHHH
T ss_pred cCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcccCCCcccchhhhHHHHHHHHHHHHHHcCcHHHHHH
Confidence 99999999999999999999999999999999999988 36789999999999999887765
No 104
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.40 E-value=6.7e-12 Score=112.76 Aligned_cols=125 Identities=14% Similarity=-0.003 Sum_probs=116.8
Q ss_pred HHHHHHhccchhhhh-hhHHHHHHHHHHHHH--HHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHH
Q psy6102 275 VIRTIKNSGNEYFKL-NRMHDAQRKYKKAVR--YIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDD 351 (426)
Q Consensus 275 ~a~~~~~~G~~~f~~-g~y~~Ai~~y~kAl~--~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~ 351 (426)
....+..+|..++.. |++++|+..|.++++ . .|....++.++|.++..+|++++|+..+++
T Consensus 75 ~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~----------------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~ 138 (225)
T 2vq2_A 75 SAEINNNYGWFLCGRLNRPAESMAYFDKALADPT----------------YPTPYIANLNKGICSAKQGQFGLAEAYLKR 138 (225)
T ss_dssp CHHHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTT----------------CSCHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHhcCcHHHHHHHHHHHHcCcC----------------CcchHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 456788999999999 999999999999998 3 788899999999999999999999999999
Q ss_pred HHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCC-CcHHHHHHHHHHHHHHhhHHHHHH
Q psy6102 352 ILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLP-NDQQILKEIAFVRKQMRHHLNLEK 415 (426)
Q Consensus 352 AL~ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P-~n~~a~~~l~~i~~~l~~~~~a~k 415 (426)
+++++|.+..+++.+|.++..+|++++|+..|++++++.| .+..++..+..++...++.+++..
T Consensus 139 ~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 203 (225)
T 2vq2_A 139 SLAAQPQFPPAFKELARTKMLAGQLGDADYYFKKYQSRVEVLQADDLLLGWKIAKALGNAQAAYE 203 (225)
T ss_dssp HHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHhCCCCchHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcCcHHHHHH
Confidence 9999999999999999999999999999999999999999 999999999988888888876653
No 105
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.40 E-value=1.6e-12 Score=110.91 Aligned_cols=96 Identities=15% Similarity=0.154 Sum_probs=92.8
Q ss_pred hcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHH
Q psy6102 320 HFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKE 399 (426)
Q Consensus 320 ~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~~~ 399 (426)
.++|.+...++.+|.++++.|++++|+..+++++.++|+++.+|+.+|.++..+|++++|+.+|++|+.++|+++.++..
T Consensus 12 ~~~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~ 91 (142)
T 2xcb_A 12 GLSEDTLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQSYSYGALMDINEPRFPFH 91 (142)
T ss_dssp TCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCcHHHHH
Confidence 34899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhHHHHHH
Q psy6102 400 IAFVRKQMRHHLNLEK 415 (426)
Q Consensus 400 l~~i~~~l~~~~~a~k 415 (426)
++.++..+++.+++..
T Consensus 92 lg~~~~~~g~~~~A~~ 107 (142)
T 2xcb_A 92 AAECHLQLGDLDGAES 107 (142)
T ss_dssp HHHHHHHTTCHHHHHH
T ss_pred HHHHHHHcCCHHHHHH
Confidence 9999999999998875
No 106
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.40 E-value=5.1e-12 Score=121.44 Aligned_cols=125 Identities=14% Similarity=0.170 Sum_probs=116.5
Q ss_pred HHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q psy6102 275 VIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILL 354 (426)
Q Consensus 275 ~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ 354 (426)
.++.+..+|..++..|+|++|+..|.++++. +|.++.++.++|.++..+|++++|+..++++++
T Consensus 2 ~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~----------------~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~ 65 (359)
T 3ieg_A 2 DVEKHLELGKKLLAAGQLADALSQFHAAVDG----------------DPDNYIAYYRRATVFLAMGKSKAALPDLTKVIA 65 (359)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----------------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh----------------CcccHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 4678999999999999999999999999998 899999999999999999999999999999999
Q ss_pred hCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCC---CcHHHHHHH------------HHHHHHHhhHHHHHH
Q psy6102 355 MEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLP---NDQQILKEI------------AFVRKQMRHHLNLEK 415 (426)
Q Consensus 355 ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P---~n~~a~~~l------------~~i~~~l~~~~~a~k 415 (426)
++|++..+++.+|.++..+|++++|+..|+++++++| ++..++..+ +.++...++.+++..
T Consensus 66 ~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~A~~ 141 (359)
T 3ieg_A 66 LKMDFTAARLQRGHLLLKQGKLDEAEDDFKKVLKSNPSEQEEKEAESQLVKADEMQRLRSQALDAFDGADYTAAIT 141 (359)
T ss_dssp HCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred hCCCcchHHHHHHHHHHHcCChHHHHHHHHHHHhcCCcccChHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHH
Confidence 9999999999999999999999999999999999999 898888877 567777777776654
No 107
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.39 E-value=9.5e-12 Score=114.71 Aligned_cols=140 Identities=11% Similarity=0.022 Sum_probs=94.6
Q ss_pred HHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhccc------------------chhhhhhh--cCcchHHHHHHHHHH
Q psy6102 276 IRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQS------------------QSKTQQKH--FRSYYTAALLNMAAV 335 (426)
Q Consensus 276 a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~------------------~~~~~~~~--~~p~~~~~~~nlA~~ 335 (426)
+..+..+|..++..|++++|+..|.++++..+..... ...+.... ..|.+..++.++|.+
T Consensus 71 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~la~~ 150 (252)
T 2ho1_A 71 ADAHAALAVVFQTEMEPKLADEEYRKALASDSRNARVLNNYGGFLYEQKRYEEAYQRLLEASQDTLYPERSRVFENLGLV 150 (252)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTCTTCTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHHhHHHHHHHHHHHHHhCccCcccHHHHHHHHHH
Confidence 3456666666666777777777776666652211000 00111222 356777777777777
Q ss_pred HHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhhHHHHHH
Q psy6102 336 QLKFKAYKRAINLCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLNLEK 415 (426)
Q Consensus 336 ~~~lg~~~~Ai~~~~~AL~ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~~~l~~i~~~l~~~~~a~k 415 (426)
+.++|++++|+..++++++++|.+..+++.+|.++..+|++++|+..|++++++.|.+..++..+..++...++.+++.+
T Consensus 151 ~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~ 230 (252)
T 2ho1_A 151 SLQMKKPAQAKEYFEKSLRLNRNQPSVALEMADLLYKEREYVPARQYYDLFAQGGGQNARSLLLGIRLAKVFEDRDTAAS 230 (252)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCcHHHHHHHHHHHHHccCHHHHHH
Confidence 77777777777777777777777777777777777777777777777777777777777777777777777777776654
No 108
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.39 E-value=5.1e-12 Score=116.29 Aligned_cols=132 Identities=13% Similarity=0.080 Sum_probs=116.0
Q ss_pred HHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchH---HHHHHHHHHHHH-------------
Q psy6102 275 VIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYT---AALLNMAAVQLK------------- 338 (426)
Q Consensus 275 ~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~---~~~~nlA~~~~~------------- 338 (426)
....++.+|..+++.|+|++|+..|+++++. .|.+. .+++.+|.++.+
T Consensus 40 ~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~----------------~P~~~~~~~a~~~~g~~~~~~~~~~~~~~~~~~ 103 (225)
T 2yhc_A 40 SQQVQLDLIYAYYKNADLPLAQAAIDRFIRL----------------NPTHPNIDYVMYMRGLTNMALDDSALQGFFGVD 103 (225)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----------------CTTCTTHHHHHHHHHHHHHHHHC----------
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH----------------CcCCCcHHHHHHHHHHHHHhhhhhhhhhhhccc
Confidence 4567899999999999999999999999998 55544 489999999987
Q ss_pred -----ccCHHHHHHHHHHHHHhCCCCHHHH-----------------HHHHHHHHHcCChHHHHHHHHHHHHhCCCcH--
Q psy6102 339 -----FKAYKRAINLCDDILLMEPNNVKAL-----------------FRRGRAQVSMNNFEQGLQDYEQALDLLPNDQ-- 394 (426)
Q Consensus 339 -----lg~~~~Ai~~~~~AL~ldp~~~kal-----------------~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~-- 394 (426)
+|++++|+..++++++.+|++..++ +.+|.+|..+|++++|+..|+++++..|+++
T Consensus 104 ~~~~~~~~~~~A~~~~~~~l~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~ 183 (225)
T 2yhc_A 104 RSDRDPQQARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQAT 183 (225)
T ss_dssp ----CCHHHHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTSHHH
T ss_pred hhhcCcHHHHHHHHHHHHHHHHCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHCcCCCcc
Confidence 5799999999999999999987554 6889999999999999999999999999986
Q ss_pred -HHHHHHHHHHHHHhhHHHHHHHHHHhhhc
Q psy6102 395 -QILKEIAFVRKQMRHHLNLEKMTYARMFQ 423 (426)
Q Consensus 395 -~a~~~l~~i~~~l~~~~~a~k~~~~k~f~ 423 (426)
.++..++.++..+++.+++.. .++++..
T Consensus 184 ~~a~~~l~~~~~~~g~~~~A~~-~~~~l~~ 212 (225)
T 2yhc_A 184 RDALPLMENAYRQMQMNAQAEK-VAKIIAA 212 (225)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHH-HHHHHHH
T ss_pred HHHHHHHHHHHHHcCCcHHHHH-HHHHHHh
Confidence 789999999999999999865 4555544
No 109
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.39 E-value=3.7e-12 Score=125.68 Aligned_cols=141 Identities=16% Similarity=0.151 Sum_probs=88.4
Q ss_pred HHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhccc------------------chhhhhhhcCcchHHHHHHHHHHH
Q psy6102 275 VIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQS------------------QSKTQQKHFRSYYTAALLNMAAVQ 336 (426)
Q Consensus 275 ~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~------------------~~~~~~~~~~p~~~~~~~nlA~~~ 336 (426)
.+..+..+|..+++.|++++|+..|++++++.+..... .........+|....++.++|.++
T Consensus 66 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 145 (388)
T 1w3b_A 66 LAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLL 145 (388)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHSCSSHHHHHHHHHHHHCTTCTHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHCCCHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Confidence 56678888999999999999999999998873221110 001223334555555666666666
Q ss_pred HHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhhHHHHHH
Q psy6102 337 LKFKAYKRAINLCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLNLEK 415 (426)
Q Consensus 337 ~~lg~~~~Ai~~~~~AL~ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~~~l~~i~~~l~~~~~a~k 415 (426)
..+|++++|+..+.++++++|+++.+|+.+|.++...|++++|+..|+++++++|++..++..++.++...++.+++..
T Consensus 146 ~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~ 224 (388)
T 1w3b_A 146 KALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVA 224 (388)
T ss_dssp HTTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCTTHHHH
T ss_pred HHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHcCCHHHHHH
Confidence 6666666666666666666666666666666666666666666666666666666666666666666666665555543
No 110
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.39 E-value=1.5e-12 Score=121.32 Aligned_cols=120 Identities=13% Similarity=0.029 Sum_probs=63.2
Q ss_pred HHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC
Q psy6102 278 TIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLMEP 357 (426)
Q Consensus 278 ~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ldp 357 (426)
.++..|..++..|+|++|+..|+++++. +|.+..++..+|.++..+|++++|+..+++++. .|
T Consensus 5 ~~~~~a~~~~~~~~~~~A~~~~~~~l~~----------------~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~-~~ 67 (272)
T 3u4t_A 5 VEFRYADFLFKNNNYAEAIEVFNKLEAK----------------KYNSPYIYNRRAVCYYELAKYDLAQKDIETYFS-KV 67 (272)
T ss_dssp CHHHHHHHHHTTTCHHHHHHHHHHHHHT----------------TCCCSTTHHHHHHHHHHTTCHHHHHHHHHHHHT-TS
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHh----------------CCCcHHHHHHHHHHHHHHhhHHHHHHHHHHHHh-cc
Confidence 3455666666666666666666666665 444444555555555555555555555555554 22
Q ss_pred CC----HHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhhHHHHH
Q psy6102 358 NN----VKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLNLE 414 (426)
Q Consensus 358 ~~----~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~~~l~~i~~~l~~~~~a~ 414 (426)
.+ ..+|+.+|.++..+|++++|+..|+++++++|.+..++..++.++..+++.+++.
T Consensus 68 ~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~ 128 (272)
T 3u4t_A 68 NATKAKSADFEYYGKILMKKGQDSLAIQQYQAAVDRDTTRLDMYGQIGSYFYNKGNFPLAI 128 (272)
T ss_dssp CTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHH
T ss_pred CchhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHccCHHHHH
Confidence 11 3335555555555555555555555555555555555555555555555554443
No 111
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.38 E-value=5.9e-12 Score=116.10 Aligned_cols=140 Identities=16% Similarity=0.124 Sum_probs=86.5
Q ss_pred HHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhccc------------------chhhhhhhcCcchHHHHHHHHHHH
Q psy6102 275 VIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQS------------------QSKTQQKHFRSYYTAALLNMAAVQ 336 (426)
Q Consensus 275 ~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~------------------~~~~~~~~~~p~~~~~~~nlA~~~ 336 (426)
.+..+..+|..++..|++++|+..|.++++..+..... ...+......|.+..++.++|.++
T Consensus 36 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~ 115 (252)
T 2ho1_A 36 ARDAYIQLGLGYLQRGNTEQAKVPLRKALEIDPSSADAHAALAVVFQTEMEPKLADEEYRKALASDSRNARVLNNYGGFL 115 (252)
T ss_dssp HHHHHHHHHHHHHHTTCTGGGHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCChHHHHHHHHHHHhcCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHH
Confidence 47889999999999999999999999999872211110 002223334455555555555555
Q ss_pred HHccCHHHHHHHHHHHHH--hCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhhHHHHH
Q psy6102 337 LKFKAYKRAINLCDDILL--MEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLNLE 414 (426)
Q Consensus 337 ~~lg~~~~Ai~~~~~AL~--ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~~~l~~i~~~l~~~~~a~ 414 (426)
..+|++++|+..+++++. .+|.+..+++.+|.++..+|++++|+..|++++++.|.+..++..++.++...++.+++.
T Consensus 116 ~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~ 195 (252)
T 2ho1_A 116 YEQKRYEEAYQRLLEASQDTLYPERSRVFENLGLVSLQMKKPAQAKEYFEKSLRLNRNQPSVALEMADLLYKEREYVPAR 195 (252)
T ss_dssp HHTTCHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHhHHHHHHHHHHHHHhCccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHcCCHHHHH
Confidence 555555555555555555 555555555555555555555555555555555555555555555555555555555554
No 112
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.38 E-value=6.6e-12 Score=119.44 Aligned_cols=125 Identities=13% Similarity=0.139 Sum_probs=116.9
Q ss_pred HHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q psy6102 275 VIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILL 354 (426)
Q Consensus 275 ~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ 354 (426)
.+..+..+|..++..|++++|+..|.++++. .|.+..++.++|.++..+|++++|+..++++++
T Consensus 171 ~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~----------------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~ 234 (327)
T 3cv0_A 171 DAQLHASLGVLYNLSNNYDSAAANLRRAVEL----------------RPDDAQLWNKLGATLANGNRPQEALDAYNRALD 234 (327)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhccHHHHHHHHHHHHHh----------------CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 3567888999999999999999999999998 888999999999999999999999999999999
Q ss_pred hCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCC------------cHHHHHHHHHHHHHHhhHHHHHH
Q psy6102 355 MEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPN------------DQQILKEIAFVRKQMRHHLNLEK 415 (426)
Q Consensus 355 ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~------------n~~a~~~l~~i~~~l~~~~~a~k 415 (426)
++|++..+++.+|.++..+|++++|+..|++++.+.|+ +..++..++.++..+++.+++..
T Consensus 235 ~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~ 307 (327)
T 3cv0_A 235 INPGYVRVMYNMAVSYSNMSQYDLAAKQLVRAIYMQVGGTTPTGEASREATRSMWDFFRMLLNVMNRPDLVEL 307 (327)
T ss_dssp HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCC-----CCTHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCccccccccchhhcCHHHHHHHHHHHHhcCCHHHHHH
Confidence 99999999999999999999999999999999999999 89999999999999999988764
No 113
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.38 E-value=3.4e-12 Score=117.50 Aligned_cols=127 Identities=12% Similarity=0.156 Sum_probs=106.2
Q ss_pred HHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Q psy6102 276 IRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLM 355 (426)
Q Consensus 276 a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~l 355 (426)
+..++.+|..+++.|+|++|+..|+++++..+. .+....+++++|.+++++|+|++|+..+++++++
T Consensus 4 ~~~~~~~a~~~~~~g~~~~A~~~~~~~~~~~p~-------------~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~ 70 (225)
T 2yhc_A 4 PNEIYATAQQKLQDGNWRQAITQLEALDNRYPF-------------GPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRL 70 (225)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-------------STTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-------------ChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 567899999999999999999999999998221 2334689999999999999999999999999999
Q ss_pred CCCCHH---HHHHHHHHHHH------------------cCChHHHHHHHHHHHHhCCCcHHHHH----------------
Q psy6102 356 EPNNVK---ALFRRGRAQVS------------------MNNFEQGLQDYEQALDLLPNDQQILK---------------- 398 (426)
Q Consensus 356 dp~~~k---al~~lg~a~~~------------------lg~~~~Al~~l~kAl~l~P~n~~a~~---------------- 398 (426)
+|++.. +++.+|.++.. +|++++|+..|+++++.+|++..+..
T Consensus 71 ~P~~~~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~~a~~a~~~l~~~~~~~~~~~ 150 (225)
T 2yhc_A 71 NPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDRLAKYE 150 (225)
T ss_dssp CTTCTTHHHHHHHHHHHHHHHHC--------------CCHHHHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHHHHHH
T ss_pred CcCCCcHHHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCChhHHHHHHHHHHHHHHHHHHH
Confidence 999865 89999999986 67999999999999999999976553
Q ss_pred -HHHHHHHHHhhHHHHHH
Q psy6102 399 -EIAFVRKQMRHHLNLEK 415 (426)
Q Consensus 399 -~l~~i~~~l~~~~~a~k 415 (426)
.++.++...+++.++..
T Consensus 151 ~~~a~~~~~~~~~~~A~~ 168 (225)
T 2yhc_A 151 YSVAEYYTERGAWVAVVN 168 (225)
T ss_dssp HHHHHHHHHHTCHHHHHH
T ss_pred HHHHHHHHHcCcHHHHHH
Confidence 34455555666655543
No 114
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.38 E-value=6.7e-12 Score=123.83 Aligned_cols=147 Identities=15% Similarity=0.150 Sum_probs=112.1
Q ss_pred HHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhccc------------------chhhhhhhcCcchHHHHHHHHHHH
Q psy6102 275 VIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQS------------------QSKTQQKHFRSYYTAALLNMAAVQ 336 (426)
Q Consensus 275 ~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~------------------~~~~~~~~~~p~~~~~~~nlA~~~ 336 (426)
.+..+..+|..+...|++++|+..|++++++.+..... ........+.|.+..++.++|.++
T Consensus 168 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 247 (388)
T 1w3b_A 168 FAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVY 247 (388)
T ss_dssp CHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCTTHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcCCHHHHHHHHHHH
Confidence 35667788888888888888888888888763322111 002334455788888888888888
Q ss_pred HHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhhHHHHHHH
Q psy6102 337 LKFKAYKRAINLCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLNLEKM 416 (426)
Q Consensus 337 ~~lg~~~~Ai~~~~~AL~ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~~~l~~i~~~l~~~~~a~k~ 416 (426)
.++|++++|+..++++++++|+++.+++.+|.++..+|++++|+..|+++++++|.+..++..++.++...++.+++..
T Consensus 248 ~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~- 326 (388)
T 1w3b_A 248 YEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVR- 326 (388)
T ss_dssp HHTTCHHHHHHHHHHHHHTCSSCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHH-
T ss_pred HHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHcCCHHHHHH-
Confidence 8888888888888888888888888888888888888888888888888888888888888888888888888877764
Q ss_pred HHHhhh
Q psy6102 417 TYARMF 422 (426)
Q Consensus 417 ~~~k~f 422 (426)
.++++.
T Consensus 327 ~~~~al 332 (388)
T 1w3b_A 327 LYRKAL 332 (388)
T ss_dssp HHHHHT
T ss_pred HHHHHH
Confidence 444443
No 115
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.38 E-value=4.6e-12 Score=114.09 Aligned_cols=104 Identities=14% Similarity=0.214 Sum_probs=99.1
Q ss_pred HHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Q psy6102 276 IRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLM 355 (426)
Q Consensus 276 a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~l 355 (426)
+..+..+|..++..|+|++|+..|.+|+++ +|.+..+++++|.++..+|++++|+.++++++++
T Consensus 37 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~----------------~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~ 100 (213)
T 1hh8_A 37 SRICFNIGCMYTILKNMTEAEKAFTRSINR----------------DKHLAVAYFQRGMLYYQTEKYDLAIKDLKEALIQ 100 (213)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHh----------------CccchHHHHHHHHHHHHcccHHHHHHHHHHHHHh
Confidence 568999999999999999999999999999 8999999999999999999999999999999998
Q ss_pred CCCCH----------------HHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHH
Q psy6102 356 EPNNV----------------KALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQ 395 (426)
Q Consensus 356 dp~~~----------------kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~ 395 (426)
.|.+. .+++++|.++..+|++++|+.+|+++++++|++..
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~ 156 (213)
T 1hh8_A 101 LRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSEPRH 156 (213)
T ss_dssp TTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSGGG
T ss_pred CCCccHHHHHHhccccCccchHHHHHHHHHHHHccCHHHHHHHHHHHHHcCccccc
Confidence 88877 99999999999999999999999999999997743
No 116
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.38 E-value=4.5e-12 Score=121.56 Aligned_cols=125 Identities=10% Similarity=-0.033 Sum_probs=110.6
Q ss_pred HHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHH-------
Q psy6102 275 VIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAIN------- 347 (426)
Q Consensus 275 ~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~------- 347 (426)
....+..+|..+...|++++|+..|+++++. +|.+..+++++|.+++++|++++|+.
T Consensus 116 ~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~----------------~P~~~~a~~~la~~~~~~g~~~~A~~~l~~~~~ 179 (287)
T 3qou_A 116 EEELXAQQAMQLMQESNYTDALPLLXDAWQL----------------SNQNGEIGLLLAETLIALNRSEDAEAVLXTIPL 179 (287)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----------------TTSCHHHHHHHHHHHHHTTCHHHHHHHHTTSCG
T ss_pred chhhHHHHHHHHHhCCCHHHHHHHHHHHHHh----------------CCcchhHHHHHHHHHHHCCCHHHHHHHHHhCch
Confidence 5567889999999999999999999999999 88888999999999888888887764
Q ss_pred ---------------------------HHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCc--HHHHH
Q psy6102 348 ---------------------------LCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPND--QQILK 398 (426)
Q Consensus 348 ---------------------------~~~~AL~ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n--~~a~~ 398 (426)
.+++++.++|+++.+++.+|.+|...|++++|+..|+++++++|++ ..++.
T Consensus 180 ~~p~~~~~~~~~~~~l~~~~~~~~a~~~l~~al~~~P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~ 259 (287)
T 3qou_A 180 QDQDTRYQGLVAQIELLXQAADTPEIQQLQQQVAENPEDAALATQLALQLHQVGRNEEALELLFGHLRXDLTAADGQTRX 259 (287)
T ss_dssp GGCSHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTGGGGHHHH
T ss_pred hhcchHHHHHHHHHHHHhhcccCccHHHHHHHHhcCCccHHHHHHHHHHHHHcccHHHHHHHHHHHHhcccccccchHHH
Confidence 4555677899999999999999999999999999999999999998 88999
Q ss_pred HHHHHHHHHhhHHHHHH
Q psy6102 399 EIAFVRKQMRHHLNLEK 415 (426)
Q Consensus 399 ~l~~i~~~l~~~~~a~k 415 (426)
.+..++..+++..++..
T Consensus 260 ~l~~~~~~~g~~~~a~~ 276 (287)
T 3qou_A 260 TFQEILAALGTGDALAS 276 (287)
T ss_dssp HHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHcCCCCcHHH
Confidence 99999999988776653
No 117
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.37 E-value=9.1e-12 Score=103.22 Aligned_cols=94 Identities=12% Similarity=0.139 Sum_probs=89.6
Q ss_pred cchHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHH
Q psy6102 323 SYYTAALLNMAAVQLKFKAYKRAINLCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAF 402 (426)
Q Consensus 323 p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~~~l~~ 402 (426)
|..+..+.++|.++++.|+|++|+..|+++++++|+++.+|+++|.++..+|++++|+.+|+++++++|++..++..++.
T Consensus 1 p~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~ 80 (126)
T 3upv_A 1 SMKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKAT 80 (126)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHH
Confidence 34578899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhHHHHHHH
Q psy6102 403 VRKQMRHHLNLEKM 416 (426)
Q Consensus 403 i~~~l~~~~~a~k~ 416 (426)
++..+++++++...
T Consensus 81 ~~~~~~~~~~A~~~ 94 (126)
T 3upv_A 81 AQIAVKEYASALET 94 (126)
T ss_dssp HHHHTTCHHHHHHH
T ss_pred HHHHHhCHHHHHHH
Confidence 99999999988753
No 118
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.37 E-value=2.7e-12 Score=113.45 Aligned_cols=122 Identities=11% Similarity=0.041 Sum_probs=97.1
Q ss_pred HHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHH----------
Q psy6102 278 TIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAIN---------- 347 (426)
Q Consensus 278 ~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~---------- 347 (426)
.+...|..++..|++++|+..|+++++. +|.+..++.++|.++.++|++++|+.
T Consensus 8 ~~~~~a~~~~~~g~~~~A~~~~~~al~~----------------~P~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p 71 (176)
T 2r5s_A 8 QLLKQVSELLQQGEHAQALNVIQTLSDE----------------LQSRGDVKLAKADCLLETKQFELAQELLATIPLEYQ 71 (176)
T ss_dssp THHHHHHHHHHTTCHHHHHHHHHTSCHH----------------HHTSHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGC
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHH----------------CCCcHHHHHHHHHHHHHCCCHHHHHHHHHHhhhccC
Confidence 4667888888899999999999999988 66666777777777777666666554
Q ss_pred ------------------------HHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCc--HHHHHHHH
Q psy6102 348 ------------------------LCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPND--QQILKEIA 401 (426)
Q Consensus 348 ------------------------~~~~AL~ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n--~~a~~~l~ 401 (426)
.++++++++|+++.+++.+|.++..+|++++|+..|+++++++|+. ..++..++
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~P~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~ 151 (176)
T 2r5s_A 72 DNSYKSLIAKLELHQQAAESPELKRLEQELAANPDNFELACELAVQYNQVGRDEEALELLWNILKVNLGAQDGEVKKTFM 151 (176)
T ss_dssp CHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHH
T ss_pred ChHHHHHHHHHHHHhhcccchHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccChHHHHHHHH
Confidence 4455566778888899999999999999999999999999998875 56888888
Q ss_pred HHHHHHhhHHHHHH
Q psy6102 402 FVRKQMRHHLNLEK 415 (426)
Q Consensus 402 ~i~~~l~~~~~a~k 415 (426)
.++..+++.+++..
T Consensus 152 ~~~~~~g~~~~A~~ 165 (176)
T 2r5s_A 152 DILSALGQGNAIAS 165 (176)
T ss_dssp HHHHHHCSSCHHHH
T ss_pred HHHHHhCCCCcHHH
Confidence 88888888776654
No 119
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=99.35 E-value=1.1e-11 Score=101.20 Aligned_cols=103 Identities=13% Similarity=0.151 Sum_probs=92.5
Q ss_pred HHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Q psy6102 294 DAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLMEPNNVKALFRRGRAQVSM 373 (426)
Q Consensus 294 ~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ldp~~~kal~~lg~a~~~l 373 (426)
.|+..|.++++. +|.+..+++++|.+++.+|++++|+..++++++++|.+..+|+.+|.++..+
T Consensus 3 ~a~~~~~~al~~----------------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~ 66 (115)
T 2kat_A 3 AITERLEAMLAQ----------------GTDNMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQ 66 (115)
T ss_dssp CHHHHHHHHHTT----------------TCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh----------------CCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHc
Confidence 578889999988 8999999999999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHhCCC--cHHHHHHHHHHHHHHhhHHH
Q psy6102 374 NNFEQGLQDYEQALDLLPN--DQQILKEIAFVRKQMRHHLN 412 (426)
Q Consensus 374 g~~~~Al~~l~kAl~l~P~--n~~a~~~l~~i~~~l~~~~~ 412 (426)
|++++|+..|++++++.|. +..+...+......+++...
T Consensus 67 g~~~~A~~~~~~al~~~~~~~~~~~~~~l~~~l~~l~~~~~ 107 (115)
T 2kat_A 67 GDRAGARQAWESGLAAAQSRGDQQVVKELQVFLRRLAREDA 107 (115)
T ss_dssp TCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHhccccC
Confidence 9999999999999999884 55666777777666665543
No 120
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.35 E-value=6e-13 Score=143.25 Aligned_cols=117 Identities=10% Similarity=-0.006 Sum_probs=110.6
Q ss_pred HHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q psy6102 275 VIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILL 354 (426)
Q Consensus 275 ~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ 354 (426)
.+..++.+|..++..|+|++|+..|++|+++ +|.+..+++++|.++.++|++++ +++|++|++
T Consensus 466 ~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l----------------~P~~~~~~~~lg~~~~~~g~~~~-~~~~~~al~ 528 (681)
T 2pzi_A 466 RWRLVWYRAVAELLTGDYDSATKHFTEVLDT----------------FPGELAPKLALAATAELAGNTDE-HKFYQTVWS 528 (681)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH----------------STTCSHHHHHHHHHHHHHTCCCT-TCHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh----------------CCCChHHHHHHHHHHHHcCChHH-HHHHHHHHH
Confidence 4678999999999999999999999999999 99999999999999999999999 999999999
Q ss_pred hCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHh
Q psy6102 355 MEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMR 408 (426)
Q Consensus 355 ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~~~l~~i~~~l~ 408 (426)
++|++..+|+++|.++..+|++++|+++|++|++++|++..++..++.++...+
T Consensus 529 ~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~~~~~~~~~~ 582 (681)
T 2pzi_A 529 TNDGVISAAFGLARARSAEGDRVGAVRTLDEVPPTSRHFTTARLTSAVTLLSGR 582 (681)
T ss_dssp HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHTSCTTSTTHHHHHHHHHHHTC---
T ss_pred hCCchHHHHHHHHHHHHHcCCHHHHHHHHHhhcccCcccHHHHHHHHHHHHccC
Confidence 999999999999999999999999999999999999999999999999975533
No 121
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.35 E-value=1.7e-11 Score=122.78 Aligned_cols=126 Identities=14% Similarity=0.168 Sum_probs=115.8
Q ss_pred hHHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHH
Q psy6102 274 DVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDIL 353 (426)
Q Consensus 274 k~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL 353 (426)
..+..+..+|..+++.|+|++|+..|+++++. .|.+..+++.+|.++..+|++++|+.++++++
T Consensus 24 ~~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~----------------~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al 87 (450)
T 2y4t_A 24 ADVEKHLELGKKLLAAGQLADALSQFHAAVDG----------------DPDNYIAYYRRATVFLAMGKSKAALPDLTKVI 87 (450)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHh----------------CCccHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 46788999999999999999999999999998 89999999999999999999999999999999
Q ss_pred HhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcH---HHHHHH------------HHHHHHHhhHHHHHH
Q psy6102 354 LMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQ---QILKEI------------AFVRKQMRHHLNLEK 415 (426)
Q Consensus 354 ~ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~---~a~~~l------------~~i~~~l~~~~~a~k 415 (426)
+++|++..+++.+|.+|..+|++++|+..|+++++++|++. .++..+ +.++...++.+++..
T Consensus 88 ~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~A~~ 164 (450)
T 2y4t_A 88 QLKMDFTAARLQRGHLLLKQGKLDEAEDDFKKVLKSNPSENEEKEAQSQLIKSDEMQRLRSQALNAFGSGDYTAAIA 164 (450)
T ss_dssp HHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHH
T ss_pred hcCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 99999999999999999999999999999999999999998 777666 444666777776654
No 122
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.35 E-value=8.7e-12 Score=118.77 Aligned_cols=125 Identities=18% Similarity=0.116 Sum_probs=119.5
Q ss_pred HHHHHHhccchhhhhh-hHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHH
Q psy6102 275 VIRTIKNSGNEYFKLN-RMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDIL 353 (426)
Q Consensus 275 ~a~~~~~~G~~~f~~g-~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL 353 (426)
.+..+..+|..++..| ++++|+.+|.++++. .|.+..+|..+|.++..+|++++|+..+++++
T Consensus 89 ~~~~~~~l~~~~~~~~~~~~~A~~~~~~a~~~----------------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~ 152 (330)
T 3hym_B 89 NPVSWFAVGCYYLMVGHKNEHARRYLSKATTL----------------EKTYGPAWIAYGHSFAVESEHDQAMAAYFTAA 152 (330)
T ss_dssp STHHHHHHHHHHHHSCSCHHHHHHHHHHHHTT----------------CTTCTHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHh----------------CCccHHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 3467889999999999 999999999999998 89999999999999999999999999999999
Q ss_pred HhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhhHHHHHH
Q psy6102 354 LMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLNLEK 415 (426)
Q Consensus 354 ~ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~~~l~~i~~~l~~~~~a~k 415 (426)
++.|.+..+++.+|.++..+|++++|+..|+++++++|.+..++..++.++...++.+++..
T Consensus 153 ~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~ 214 (330)
T 3hym_B 153 QLMKGCHLPMLYIGLEYGLTNNSKLAERFFSQALSIAPEDPFVMHEVGVVAFQNGEWKTAEK 214 (330)
T ss_dssp HHTTTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HhccccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcccHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999998875
No 123
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.34 E-value=5.3e-12 Score=117.61 Aligned_cols=119 Identities=13% Similarity=0.076 Sum_probs=111.5
Q ss_pred HHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q psy6102 275 VIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILL 354 (426)
Q Consensus 275 ~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ 354 (426)
.+..+..+|..+...|++++|+..|.++++. +|.+..++.++|.++..+|++++|+.+++++++
T Consensus 73 ~~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~----------------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~ 136 (272)
T 3u4t_A 73 KSADFEYYGKILMKKGQDSLAIQQYQAAVDR----------------DTTRLDMYGQIGSYFYNKGNFPLAIQYMEKQIR 136 (272)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----------------STTCTHHHHHHHHHHHHTTCHHHHHHHHGGGCC
T ss_pred HHHHHHHHHHHHHHcccHHHHHHHHHHHHhc----------------CcccHHHHHHHHHHHHHccCHHHHHHHHHHHhh
Confidence 4667899999999999999999999999999 899999999999999999999999999999999
Q ss_pred hCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhh
Q psy6102 355 MEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRH 409 (426)
Q Consensus 355 ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~~~l~~i~~~l~~ 409 (426)
++|.++.+++.+|...+..+++++|++.|+++++++|++..++..++.++..+++
T Consensus 137 ~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~~~ 191 (272)
T 3u4t_A 137 PTTTDPKVFYELGQAYYYNKEYVKADSSFVKVLELKPNIYIGYLWRARANAAQDP 191 (272)
T ss_dssp SSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHST
T ss_pred cCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcCc
Confidence 9999999999999555556699999999999999999999999999999998876
No 124
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.34 E-value=5.8e-13 Score=107.06 Aligned_cols=95 Identities=20% Similarity=0.291 Sum_probs=78.2
Q ss_pred HHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q psy6102 275 VIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILL 354 (426)
Q Consensus 275 ~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ 354 (426)
.+..+..+|..++..|+|++|+..|++|+++ .|.++.++.++|.|+.++|++++|+.+++++++
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~----------------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 66 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITA----------------QPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLR 66 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH----------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc----------------CCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 4567788888888888888888888888888 788888888888888888888888888888888
Q ss_pred hCCCC------HHHHHHHHHHHHHcCChHHHHHHHHH
Q psy6102 355 MEPNN------VKALFRRGRAQVSMNNFEQGLQDYEQ 385 (426)
Q Consensus 355 ldp~~------~kal~~lg~a~~~lg~~~~Al~~l~k 385 (426)
++|++ ..+++++|.++..+|++++|+..+++
T Consensus 67 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 103 (111)
T 2l6j_A 67 YTSTAEHVAIRSKLQYRLELAQGAVGSVQIPVVEVDE 103 (111)
T ss_dssp SCSSTTSHHHHHHHHHHHHHHHHHHHCCCCCSSSSSS
T ss_pred hCCCccHHHHHHHHHHHHHHHHHHHHhHhhhHhHHHH
Confidence 88888 88888888888888888777766553
No 125
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.34 E-value=9.2e-12 Score=119.38 Aligned_cols=132 Identities=7% Similarity=0.022 Sum_probs=114.3
Q ss_pred hHHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHc-cCHHHHHHHHHHH
Q psy6102 274 DVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKF-KAYKRAINLCDDI 352 (426)
Q Consensus 274 k~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~l-g~~~~Ai~~~~~A 352 (426)
..+..+.++|..+...|+|++|+.+|.+|+++.+.... ......++.++|.+|... |++++|+.+|++|
T Consensus 75 ~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~----------~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~A 144 (292)
T 1qqe_A 75 EAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQ----------FRRGANFKFELGEILENDLHDYAKAIDCYELA 144 (292)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCC----------HHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHH
Confidence 35778999999999999999999999999998544321 122367899999999995 9999999999999
Q ss_pred HHhCCCC------HHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHH-------HHHHHHHHHHHHhhHHHHHH
Q psy6102 353 LLMEPNN------VKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQ-------ILKEIAFVRKQMRHHLNLEK 415 (426)
Q Consensus 353 L~ldp~~------~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~-------a~~~l~~i~~~l~~~~~a~k 415 (426)
+++.|.. ..++.++|.++..+|++++|+.+|++++++.|++.. ++..++.++..+++..++..
T Consensus 145 l~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~ 220 (292)
T 1qqe_A 145 GEWYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRLSQWSLKDYFLKKGLCQLAATDAVAAAR 220 (292)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTTTGGGHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHhCCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 9998854 678999999999999999999999999999998754 56888999999999988865
No 126
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.34 E-value=8.9e-12 Score=115.60 Aligned_cols=134 Identities=21% Similarity=0.155 Sum_probs=119.8
Q ss_pred hHHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHH
Q psy6102 274 DVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDIL 353 (426)
Q Consensus 274 k~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL 353 (426)
..+..+..+|..++..|+|++|+.+|.+++++...... ...|....++.++|.++..+|++++|+.++.+++
T Consensus 41 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~--------~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al 112 (283)
T 3edt_B 41 DVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLG--------KDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRAL 112 (283)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTC--------TTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcC--------CcchHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 36788999999999999999999999999998533200 1157788999999999999999999999999999
Q ss_pred Hh--------CCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHh--------CCCcHHHHHHHHHHHHHHhhHHHHHH
Q psy6102 354 LM--------EPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDL--------LPNDQQILKEIAFVRKQMRHHLNLEK 415 (426)
Q Consensus 354 ~l--------dp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l--------~P~n~~a~~~l~~i~~~l~~~~~a~k 415 (426)
.+ +|....+++++|.++..+|++++|+..|++++.+ .|....++..++.++...++.+++..
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~ 190 (283)
T 3edt_B 113 EIREKVLGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLKQGKYQDAET 190 (283)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTCHHHHHH
T ss_pred HHHHHHcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 98 5778999999999999999999999999999999 78888999999999999999988865
No 127
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.34 E-value=1.7e-11 Score=113.99 Aligned_cols=124 Identities=9% Similarity=-0.017 Sum_probs=113.1
Q ss_pred HhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC
Q psy6102 280 KNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLMEPNN 359 (426)
Q Consensus 280 ~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ldp~~ 359 (426)
..++..+...++|++|+..|.++++..+ ...|.++.++..+|.++..+|++++|+..++++++++|.+
T Consensus 9 ~~~~~~~~~~~~~~~A~~~~~~~~~~~~------------~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~ 76 (275)
T 1xnf_A 9 EVLAVPLQPTLQQEVILARMEQILASRA------------LTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDM 76 (275)
T ss_dssp GGSCCCCCCCHHHHHHHHHHHHHHTSSC------------CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCC
T ss_pred cceeeccCccchHHHHHHHHHHHHhccc------------ccCchhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCCc
Confidence 4566677788999999999999998611 0136788999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhhHHHHHH
Q psy6102 360 VKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLNLEK 415 (426)
Q Consensus 360 ~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~~~l~~i~~~l~~~~~a~k 415 (426)
+.+++.+|.++..+|++++|+.+|+++++++|.+..++..++.++..+++.+++..
T Consensus 77 ~~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~g~~~~A~~ 132 (275)
T 1xnf_A 77 PEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQD 132 (275)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhcCccccHHHHHHHHHHHHhccHHHHHH
Confidence 99999999999999999999999999999999999999999999999999998875
No 128
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.33 E-value=2.1e-11 Score=117.34 Aligned_cols=124 Identities=14% Similarity=0.120 Sum_probs=73.4
Q ss_pred HHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHH--HHccCHHHHHHHHHHH
Q psy6102 275 VIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQ--LKFKAYKRAINLCDDI 352 (426)
Q Consensus 275 ~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~--~~lg~~~~Ai~~~~~A 352 (426)
....+..+|..+.+.|++++|+..|+++++. +|.........+.+. ...|++++|+..++++
T Consensus 129 ~~~~~~~l~~~~~~~g~~~~A~~~l~~~~~~----------------~p~~~~~~l~~a~~~l~~~~~~~~eA~~~~~~~ 192 (291)
T 3mkr_A 129 SLECMAMTVQILLKLDRLDLARKELKKMQDQ----------------DEDATLTQLATAWVSLAAGGEKLQDAYYIFQEM 192 (291)
T ss_dssp SHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----------------CTTCHHHHHHHHHHHHHHCTTHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhh----------------CcCcHHHHHHHHHHHHHhCchHHHHHHHHHHHH
Confidence 4567788888899999999999999998887 444332222222111 1225555555555555
Q ss_pred HHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhhHHHHH
Q psy6102 353 LLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLNLE 414 (426)
Q Consensus 353 L~ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~~~l~~i~~~l~~~~~a~ 414 (426)
++.+|+++.+|+.+|.++..+|++++|++.|++|++++|+++.++.+++.+...+++..++.
T Consensus 193 l~~~p~~~~~~~~la~~~~~~g~~~eA~~~l~~al~~~p~~~~~l~~l~~~~~~~g~~~eaa 254 (291)
T 3mkr_A 193 ADKCSPTLLLLNGQAACHMAQGRWEAAEGVLQEALDKDSGHPETLINLVVLSQHLGKPPEVT 254 (291)
T ss_dssp HHHSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHH
T ss_pred HHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCHHHH
Confidence 55555555555555555555555555555555555555555555555555555555554433
No 129
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.33 E-value=1.4e-11 Score=123.41 Aligned_cols=117 Identities=26% Similarity=0.391 Sum_probs=107.7
Q ss_pred HHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcch----HHHHHHHHHHHHHccCHHHHHHHHHHH
Q psy6102 277 RTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYY----TAALLNMAAVQLKFKAYKRAINLCDDI 352 (426)
Q Consensus 277 ~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~----~~~~~nlA~~~~~lg~~~~Ai~~~~~A 352 (426)
..+..+|..++..|++++|+..|.+++++ .|.+ ..++.++|.++.++|++++|+..++++
T Consensus 258 ~~~~~~~~~~~~~g~~~~A~~~~~~~l~~----------------~p~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a 321 (450)
T 2y4t_A 258 NKLIESAEELIRDGRYTDATSKYESVMKT----------------EPSIAEYTVRSKERICHCFSKDEKPVEAIRVCSEV 321 (450)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHH----------------CCSSHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhc----------------CCcchHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 34466699999999999999999999998 6666 458999999999999999999999999
Q ss_pred HHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhh
Q psy6102 353 LLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRH 409 (426)
Q Consensus 353 L~ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~~~l~~i~~~l~~ 409 (426)
++++|+++.+|+.+|.++..+|++++|+..|+++++++|++..++..++.+...+++
T Consensus 322 ~~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~ 378 (450)
T 2y4t_A 322 LQMEPDNVNALKDRAEAYLIEEMYDEAIQDYETAQEHNENDQQIREGLEKAQRLLKQ 378 (450)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHHHH
T ss_pred HHhCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHhhc
Confidence 999999999999999999999999999999999999999999999999988766554
No 130
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.33 E-value=1.5e-11 Score=117.02 Aligned_cols=96 Identities=17% Similarity=0.165 Sum_probs=84.6
Q ss_pred hcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC---------CCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhC
Q psy6102 320 HFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLME---------PNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLL 390 (426)
Q Consensus 320 ~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ld---------p~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~ 390 (426)
...|.+..++.++|.++..+|++++|+..+++++.+. |.++.+++.+|.++..+|++++|+..|+++++++
T Consensus 187 ~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~ 266 (330)
T 3hym_B 187 SIAPEDPFVMHEVGVVAFQNGEWKTAEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHVCRKLKKYAEALDYHRQALVLI 266 (330)
T ss_dssp TTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTTSCSCTTTTCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred HhCCCChHHHHHHHHHHHHcccHHHHHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhC
Confidence 3378888999999999999999999999999999886 6778899999999999999999999999999999
Q ss_pred CCcHHHHHHHHHHHHHHhhHHHHHH
Q psy6102 391 PNDQQILKEIAFVRKQMRHHLNLEK 415 (426)
Q Consensus 391 P~n~~a~~~l~~i~~~l~~~~~a~k 415 (426)
|++..++..++.++..+++.+++..
T Consensus 267 ~~~~~~~~~la~~~~~~g~~~~A~~ 291 (330)
T 3hym_B 267 PQNASTYSAIGYIHSLMGNFENAVD 291 (330)
T ss_dssp TTCSHHHHHHHHHHHHHTCHHHHHH
T ss_pred ccchHHHHHHHHHHHHhccHHHHHH
Confidence 9999999999999999888888765
No 131
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.33 E-value=1.1e-11 Score=104.03 Aligned_cols=93 Identities=12% Similarity=0.134 Sum_probs=85.4
Q ss_pred cchHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcH-------H
Q psy6102 323 SYYTAALLNMAAVQLKFKAYKRAINLCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQ-------Q 395 (426)
Q Consensus 323 p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~-------~ 395 (426)
++.+.++.++|.++++.|+|++|+.+|++||+++|+++.+|+++|.+|..+|++++|+++|++|++++|++. .
T Consensus 5 ~d~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~ 84 (127)
T 4gcn_A 5 TDAAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADYKLIAK 84 (127)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhHHHHH
Confidence 445778999999999999999999999999999999999999999999999999999999999999998763 4
Q ss_pred HHHHHHHHHHHHhhHHHHHH
Q psy6102 396 ILKEIAFVRKQMRHHLNLEK 415 (426)
Q Consensus 396 a~~~l~~i~~~l~~~~~a~k 415 (426)
++..++.++..+++++++..
T Consensus 85 ~~~~lg~~~~~~~~~~~A~~ 104 (127)
T 4gcn_A 85 AMSRAGNAFQKQNDLSLAVQ 104 (127)
T ss_dssp HHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHH
Confidence 77888899999999988865
No 132
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.33 E-value=2.8e-11 Score=117.57 Aligned_cols=118 Identities=15% Similarity=0.163 Sum_probs=112.0
Q ss_pred hccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcc--hHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC
Q psy6102 281 NSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSY--YTAALLNMAAVQLKFKAYKRAINLCDDILLMEPN 358 (426)
Q Consensus 281 ~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~--~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ldp~ 358 (426)
..|..+ ..|++++|+..|.++++. .|. ...++.++|.++.++|++++|+..+++++.++|+
T Consensus 187 ~~~~~~-~~~~~~~A~~~~~~a~~~----------------~p~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~ 249 (368)
T 1fch_A 187 ILGSLL-SDSLFLEVKELFLAAVRL----------------DPTSIDPDVQCGLGVLFNLSGEYDKAVDCFTAALSVRPN 249 (368)
T ss_dssp TTHHHH-HHHHHHHHHHHHHHHHHH----------------STTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHh-hcccHHHHHHHHHHHHHh----------------CcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcC
Confidence 455555 999999999999999998 788 8999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhhHHHHHH
Q psy6102 359 NVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLNLEK 415 (426)
Q Consensus 359 ~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~~~l~~i~~~l~~~~~a~k 415 (426)
++.+++.+|.++..+|++++|+..|+++++++|++..++..++.++..+++.+++..
T Consensus 250 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~ 306 (368)
T 1fch_A 250 DYLLWNKLGATLANGNQSEEAVAAYRRALELQPGYIRSRYNLGISCINLGAHREAVE 306 (368)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHH
Confidence 999999999999999999999999999999999999999999999999999998875
No 133
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.31 E-value=3.5e-11 Score=100.20 Aligned_cols=95 Identities=14% Similarity=0.077 Sum_probs=88.5
Q ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH
Q psy6102 327 AALLNMAAVQLKFKAYKRAINLCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQ 406 (426)
Q Consensus 327 ~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~~~l~~i~~~ 406 (426)
..++.+|.++++.|++++|+..++++++++|+++.+|+.+|.++..+|++++|+.+|++|++++|++..++..++.++..
T Consensus 18 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~la~~~~~ 97 (121)
T 1hxi_A 18 ENPMEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTN 97 (121)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhHHHHHHHHHHhhh
Q psy6102 407 MRHHLNLEKMTYARMF 422 (426)
Q Consensus 407 l~~~~~a~k~~~~k~f 422 (426)
+++.+++.. .+.+.+
T Consensus 98 ~g~~~~A~~-~~~~al 112 (121)
T 1hxi_A 98 EHNANAALA-SLRAWL 112 (121)
T ss_dssp HHHHHHHHH-HHHHHH
T ss_pred cCCHHHHHH-HHHHHH
Confidence 999998876 444433
No 134
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.30 E-value=3.1e-11 Score=105.01 Aligned_cols=95 Identities=20% Similarity=0.209 Sum_probs=91.7
Q ss_pred CcchHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHH
Q psy6102 322 RSYYTAALLNMAAVQLKFKAYKRAINLCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIA 401 (426)
Q Consensus 322 ~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~~~l~ 401 (426)
++..+..++.+|.++++.|+|++|+..|+++++++|+++.+|+++|.+|..+|++++|+.+|+++++++|++..++..++
T Consensus 7 ~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg 86 (164)
T 3sz7_A 7 PTPESDKLKSEGNAAMARKEYSKAIDLYTQALSIAPANPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKYSKAWSRLG 86 (164)
T ss_dssp CCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred hhhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 67788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhHHHHHHH
Q psy6102 402 FVRKQMRHHLNLEKM 416 (426)
Q Consensus 402 ~i~~~l~~~~~a~k~ 416 (426)
.++..+++++++...
T Consensus 87 ~~~~~~g~~~~A~~~ 101 (164)
T 3sz7_A 87 LARFDMADYKGAKEA 101 (164)
T ss_dssp HHHHHTTCHHHHHHH
T ss_pred HHHHHccCHHHHHHH
Confidence 999999999988763
No 135
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.29 E-value=5e-11 Score=120.87 Aligned_cols=104 Identities=19% Similarity=0.327 Sum_probs=99.2
Q ss_pred hhHHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHH
Q psy6102 273 EDVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDI 352 (426)
Q Consensus 273 lk~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~A 352 (426)
.+.+..++.+|+.+++.|+|++|+..|+++++. +| +..+|.++|.|++++|++++|+.+++++
T Consensus 3 ~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~----------------~p-~~~~~~~la~~~~~~g~~~~A~~~~~~a 65 (514)
T 2gw1_A 3 DKYALALKDKGNQFFRNKKYDDAIKYYNWALEL----------------KE-DPVFYSNLSACYVSVGDLKKVVEMSTKA 65 (514)
T ss_dssp HHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHH----------------CC-CHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHhccHHHHHHHHHHHHhc----------------Cc-cHHHHHhHHHHHHHHhhHHHHHHHHHHH
Confidence 357889999999999999999999999999999 77 5899999999999999999999999999
Q ss_pred HHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCc
Q psy6102 353 LLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPND 393 (426)
Q Consensus 353 L~ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n 393 (426)
++++|++..+++.+|.++..+|++++|+..|++++.++|.+
T Consensus 66 l~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~ 106 (514)
T 2gw1_A 66 LELKPDYSKVLLRRASANEGLGKFADAMFDLSVLSLNGDFN 106 (514)
T ss_dssp HHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSSSCC
T ss_pred hccChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCc
Confidence 99999999999999999999999999999999999999854
No 136
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.28 E-value=8.9e-11 Score=111.55 Aligned_cols=117 Identities=14% Similarity=0.164 Sum_probs=111.6
Q ss_pred cc-hhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHH
Q psy6102 283 GN-EYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLMEPNNVK 361 (426)
Q Consensus 283 G~-~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ldp~~~k 361 (426)
|. .+...|++++|+..|.++++. .|.+..++..+|.++..+|++++|+..++++++++|+++.
T Consensus 144 ~~~~~~~~~~~~~A~~~~~~~~~~----------------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~ 207 (327)
T 3cv0_A 144 EDFFFAAPNEYRECRTLLHAALEM----------------NPNDAQLHASLGVLYNLSNNYDSAAANLRRAVELRPDDAQ 207 (327)
T ss_dssp --CCTTSHHHHHHHHHHHHHHHHH----------------STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred HhHHHHHcccHHHHHHHHHHHHhh----------------CCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCcHH
Confidence 44 689999999999999999998 8889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhhHHHHHH
Q psy6102 362 ALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLNLEK 415 (426)
Q Consensus 362 al~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~~~l~~i~~~l~~~~~a~k 415 (426)
+++.+|.++..+|++++|+..|+++++++|++..++..++.++..+++.+++.+
T Consensus 208 ~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~g~~~~A~~ 261 (327)
T 3cv0_A 208 LWNKLGATLANGNRPQEALDAYNRALDINPGYVRVMYNMAVSYSNMSQYDLAAK 261 (327)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhccHHHHHH
Confidence 999999999999999999999999999999999999999999999999988865
No 137
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.27 E-value=9.1e-11 Score=97.88 Aligned_cols=94 Identities=16% Similarity=0.063 Sum_probs=90.4
Q ss_pred CcchHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHH
Q psy6102 322 RSYYTAALLNMAAVQLKFKAYKRAINLCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIA 401 (426)
Q Consensus 322 ~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~~~l~ 401 (426)
++..+..++.+|.+++..|+|++|+..+++++.++|+++.+++.+|.++..+|++++|+.+|+++++++|++..++..++
T Consensus 5 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~ 84 (137)
T 3q49_B 5 KSPSAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLG 84 (137)
T ss_dssp -CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHHHHHH
Confidence 67889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhHHHHHH
Q psy6102 402 FVRKQMRHHLNLEK 415 (426)
Q Consensus 402 ~i~~~l~~~~~a~k 415 (426)
.++..+++.+++..
T Consensus 85 ~~~~~~~~~~~A~~ 98 (137)
T 3q49_B 85 QCQLEMESYDEAIA 98 (137)
T ss_dssp HHHHHTTCHHHHHH
T ss_pred HHHHHHhhHHHHHH
Confidence 99999999988864
No 138
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.27 E-value=5e-11 Score=121.96 Aligned_cols=122 Identities=11% Similarity=0.080 Sum_probs=103.4
Q ss_pred HHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC
Q psy6102 278 TIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLMEP 357 (426)
Q Consensus 278 ~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ldp 357 (426)
.+..+|..++..|++++|+..|.++++. .|.+..++..+|.++..+|++++|+..+++++.++|
T Consensus 278 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~----------------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~ 341 (537)
T 3fp2_A 278 SYIFLALTLADKENSQEFFKFFQKAVDL----------------NPEYPPTYYHRGQMYFILQDYKNAKEDFQKAQSLNP 341 (537)
T ss_dssp HHHHHHHHTCCSSCCHHHHHHHHHHHHH----------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHhcc----------------CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCC
Confidence 3444444455555555555555555544 899999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhhHHHHHH
Q psy6102 358 NNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLNLEK 415 (426)
Q Consensus 358 ~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~~~l~~i~~~l~~~~~a~k 415 (426)
++..+++.+|.++..+|++++|+..|+++++++|++..++..++.++...++.+++..
T Consensus 342 ~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~ 399 (537)
T 3fp2_A 342 ENVYPYIQLACLLYKQGKFTESEAFFNETKLKFPTLPEVPTFFAEILTDRGDFDTAIK 399 (537)
T ss_dssp TCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999988865
No 139
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.27 E-value=2.9e-11 Score=115.90 Aligned_cols=132 Identities=11% Similarity=0.082 Sum_probs=113.2
Q ss_pred hHHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHH
Q psy6102 274 DVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDIL 353 (426)
Q Consensus 274 k~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL 353 (426)
..+..+...|+.+...|+|++|+.+|.+|+++.+.... .+..+.+|.++|.+|.++|++++|+.+|++|+
T Consensus 35 ~A~~~~~~a~~~~~~~g~~~~A~~~~~~al~~~~~~~~----------~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al 104 (292)
T 1qqe_A 35 EAADLCVQAATIYRLRKELNLAGDSFLKAADYQKKAGN----------EDEAGNTYVEAYKCFKSGGNSVNAVDSLENAI 104 (292)
T ss_dssp HHHHHHHHHHHHHHHTTCTHHHHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCC----------HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 35556667788899999999999999999998544321 12347899999999999999999999999999
Q ss_pred HhCCCC------HHHHHHHHHHHHHc-CChHHHHHHHHHHHHhCCCc------HHHHHHHHHHHHHHhhHHHHHH
Q psy6102 354 LMEPNN------VKALFRRGRAQVSM-NNFEQGLQDYEQALDLLPND------QQILKEIAFVRKQMRHHLNLEK 415 (426)
Q Consensus 354 ~ldp~~------~kal~~lg~a~~~l-g~~~~Al~~l~kAl~l~P~n------~~a~~~l~~i~~~l~~~~~a~k 415 (426)
.+.|.. ..++.++|.+|..+ |++++|+.+|++|+++.|.+ ..++..++.++..+++++++..
T Consensus 105 ~l~~~~g~~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~ 179 (292)
T 1qqe_A 105 QIFTHRGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEASD 179 (292)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHhCCHHHHHH
Confidence 998754 67899999999996 99999999999999998864 4678899999999999998875
No 140
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.27 E-value=1.7e-10 Score=110.98 Aligned_cols=98 Identities=12% Similarity=0.007 Sum_probs=91.5
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHH
Q psy6102 286 YFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLMEPNNVKALFR 365 (426)
Q Consensus 286 ~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ldp~~~kal~~ 365 (426)
+...|++++|+..|+++++. .|.++.+++++|.++.++|++++|+..++++|+++|+++.++++
T Consensus 176 ~~~~~~~~eA~~~~~~~l~~----------------~p~~~~~~~~la~~~~~~g~~~eA~~~l~~al~~~p~~~~~l~~ 239 (291)
T 3mkr_A 176 AAGGEKLQDAYYIFQEMADK----------------CSPTLLLLNGQAACHMAQGRWEAAEGVLQEALDKDSGHPETLIN 239 (291)
T ss_dssp HHCTTHHHHHHHHHHHHHHH----------------SCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HhCchHHHHHHHHHHHHHHh----------------CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHH
Confidence 34569999999999999999 89999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCChHH-HHHHHHHHHHhCCCcHHHHHH
Q psy6102 366 RGRAQVSMNNFEQ-GLQDYEQALDLLPNDQQILKE 399 (426)
Q Consensus 366 lg~a~~~lg~~~~-Al~~l~kAl~l~P~n~~a~~~ 399 (426)
+|.++..+|++++ |.++++++++++|+++.+...
T Consensus 240 l~~~~~~~g~~~eaa~~~~~~~~~~~P~~~~~~d~ 274 (291)
T 3mkr_A 240 LVVLSQHLGKPPEVTNRYLSQLKDAHRSHPFIKEY 274 (291)
T ss_dssp HHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHhCCCChHHHHH
Confidence 9999999999986 568999999999999987653
No 141
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.27 E-value=5.9e-11 Score=96.92 Aligned_cols=102 Identities=25% Similarity=0.430 Sum_probs=96.9
Q ss_pred HHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Q psy6102 276 IRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLM 355 (426)
Q Consensus 276 a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~l 355 (426)
...+..+|..++..|++++|+..|.+++.. .|....++.++|.++...|++++|+..+++++.+
T Consensus 35 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~----------------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~ 98 (136)
T 2fo7_A 35 AEAWYNLGNAYYKQGDYDEAIEYYQKALEL----------------DPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALEL 98 (136)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH----------------CTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHHH----------------CCCchHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 456788899999999999999999999998 8888999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCc
Q psy6102 356 EPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPND 393 (426)
Q Consensus 356 dp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n 393 (426)
.|.+..+++.+|.++..+|++++|+..|++++.++|.+
T Consensus 99 ~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~ 136 (136)
T 2fo7_A 99 DPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRS 136 (136)
T ss_dssp CTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHSTTC
T ss_pred CCCChHHHHHHHHHHHHHccHHHHHHHHHHHHccCCCC
Confidence 99999999999999999999999999999999999864
No 142
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.26 E-value=7.2e-11 Score=91.22 Aligned_cols=85 Identities=22% Similarity=0.423 Sum_probs=80.9
Q ss_pred cchHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHH
Q psy6102 323 SYYTAALLNMAAVQLKFKAYKRAINLCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAF 402 (426)
Q Consensus 323 p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~~~l~~ 402 (426)
+....+++++|.++...+++++|+..++++++++|.+..+++.+|.++..+|++++|+..|+++++++|++..++..++.
T Consensus 6 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~ 85 (91)
T 1na3_A 6 GNSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGN 85 (91)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHHHHHHH
Confidence 45788999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred HHHHH
Q psy6102 403 VRKQM 407 (426)
Q Consensus 403 i~~~l 407 (426)
++..+
T Consensus 86 ~~~~~ 90 (91)
T 1na3_A 86 AKQKQ 90 (91)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 87754
No 143
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.26 E-value=3.6e-11 Score=125.83 Aligned_cols=112 Identities=17% Similarity=0.107 Sum_probs=90.6
Q ss_pred hhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q psy6102 289 LNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLMEPNNVKALFRRGR 368 (426)
Q Consensus 289 ~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ldp~~~kal~~lg~ 368 (426)
.|++++|+..|+++++. +|.+..++.++|.++.++|++++|++.++++++++|++..+++.+|.
T Consensus 2 ~g~~~~A~~~~~~al~~----------------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~ 65 (568)
T 2vsy_A 2 TADGPRELLQLRAAVRH----------------RPQDFVAWLMLADAELGMGDTTAGEMAVQRGLALHPGHPEAVARLGR 65 (568)
T ss_dssp -----------------------------------CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTSTTCHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHh----------------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 47899999999999998 89999999999999999999999999999999999999999999999
Q ss_pred HHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhhHHHHHHH
Q psy6102 369 AQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLNLEKM 416 (426)
Q Consensus 369 a~~~lg~~~~Al~~l~kAl~l~P~n~~a~~~l~~i~~~l~~~~~a~k~ 416 (426)
++..+|++++|++.|+++++++|++..++..++.++..+++.+++...
T Consensus 66 ~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~ 113 (568)
T 2vsy_A 66 VRWTQQRHAEAAVLLQQASDAAPEHPGIALWLGHALEDAGQAEAAAAA 113 (568)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHH
Confidence 999999999999999999999999999999999999999999988753
No 144
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.25 E-value=5.7e-11 Score=104.22 Aligned_cols=91 Identities=14% Similarity=0.145 Sum_probs=86.1
Q ss_pred hHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-------CHH-----HHHHHHHHHHHcCChHHHHHHHHHHHHh---
Q psy6102 325 YTAALLNMAAVQLKFKAYKRAINLCDDILLMEPN-------NVK-----ALFRRGRAQVSMNNFEQGLQDYEQALDL--- 389 (426)
Q Consensus 325 ~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ldp~-------~~k-----al~~lg~a~~~lg~~~~Al~~l~kAl~l--- 389 (426)
....+.++|.+++++|+|++|+..|++||+++|+ +.. +|+++|.++..+|+|++|+.+|++||++
T Consensus 10 ~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~ 89 (159)
T 2hr2_A 10 GAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNR 89 (159)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhc
Confidence 3567899999999999999999999999999999 554 9999999999999999999999999999
Q ss_pred ----CCCcHHHH----HHHHHHHHHHhhHHHHHH
Q psy6102 390 ----LPNDQQIL----KEIAFVRKQMRHHLNLEK 415 (426)
Q Consensus 390 ----~P~n~~a~----~~l~~i~~~l~~~~~a~k 415 (426)
+|++..++ .+++.++..+++++++..
T Consensus 90 ~~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~ 123 (159)
T 2hr2_A 90 RGELNQDEGKLWISAVYSRALALDGLGRGAEAMP 123 (159)
T ss_dssp HCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred cccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHH
Confidence 99999999 999999999999999875
No 145
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.25 E-value=6.8e-12 Score=123.32 Aligned_cols=113 Identities=12% Similarity=0.144 Sum_probs=106.1
Q ss_pred hhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC--------
Q psy6102 288 KLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLMEPNN-------- 359 (426)
Q Consensus 288 ~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ldp~~-------- 359 (426)
..+++++|+..|.++++. +|..+.++.++|.+++++|+|++|+..|++|+.++|.+
T Consensus 125 ~L~~~~~A~~~~~~a~~~----------------~p~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~ 188 (336)
T 1p5q_A 125 HLKSFEKAKESWEMNSEE----------------KLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEA 188 (336)
T ss_dssp EEEEEECCCCGGGCCHHH----------------HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHH
T ss_pred EEeecccccchhcCCHHH----------------HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhccccCChHHH
Confidence 566777888888888887 78899999999999999999999999999999999999
Q ss_pred -------HHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhhHHHHHHH
Q psy6102 360 -------VKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLNLEKM 416 (426)
Q Consensus 360 -------~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~~~l~~i~~~l~~~~~a~k~ 416 (426)
..+|+++|.||..+|++++|+.+|++|++++|++..++..++.++..++++++|...
T Consensus 189 ~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~ 252 (336)
T 1p5q_A 189 QKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLSRRGEAHLAVNDFELARAD 252 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHH
Confidence 799999999999999999999999999999999999999999999999999988753
No 146
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.24 E-value=8.1e-11 Score=118.84 Aligned_cols=126 Identities=13% Similarity=0.045 Sum_probs=104.4
Q ss_pred HHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Q psy6102 276 IRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLM 355 (426)
Q Consensus 276 a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~l 355 (426)
+..+..+|.+++.+|+|++|+.+|++|+++.+.... ...+|.....|.|+|.+|..+|++++|+.++++++++
T Consensus 51 a~~yn~Lg~~~~~~G~~~eAl~~~~kAl~~~~~~~~-------~~~~~~~~~~~~nla~~y~~~g~~~~A~~~~~ka~~i 123 (472)
T 4g1t_A 51 ATMCNLLAYLKHLKGQNEAALECLRKAEELIQQEHA-------DQAEIRSLVTWGNYAWVYYHMGRLSDVQIYVDKVKHV 123 (472)
T ss_dssp CHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSG-------GGCTTTTHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcCc-------cccchHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHH
Confidence 456788999999999999999999999998654321 2236777889999999999999999999999999887
Q ss_pred C--------CCCHHHHHHHHHHHHHc--CChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHh
Q psy6102 356 E--------PNNVKALFRRGRAQVSM--NNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMR 408 (426)
Q Consensus 356 d--------p~~~kal~~lg~a~~~l--g~~~~Al~~l~kAl~l~P~n~~a~~~l~~i~~~l~ 408 (426)
. +..+.++..+|.++... ++|++|+++|++|++++|+++.+...++.+...++
T Consensus 124 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~p~~~~~~~~~~~~~~~l~ 186 (472)
T 4g1t_A 124 CEKFSSPYRIESPELDCEEGWTRLKCGGNQNERAKVCFEKALEKKPKNPEFTSGLAIASYRLD 186 (472)
T ss_dssp HHHSCCSSCCCCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHH
T ss_pred hHhcccccchhhHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhc
Confidence 3 45688899998887665 46899999999999999999998888887765544
No 147
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.24 E-value=4.2e-11 Score=110.98 Aligned_cols=141 Identities=14% Similarity=0.105 Sum_probs=121.3
Q ss_pred hHHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHH
Q psy6102 274 DVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDIL 353 (426)
Q Consensus 274 k~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL 353 (426)
..+..+..+|..++..|++++|+.+|.+++++...... .-.|....++.++|.++..+|++++|+..+++++
T Consensus 83 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~--------~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al 154 (283)
T 3edt_B 83 AVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLG--------KFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRAL 154 (283)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHC--------TTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcC--------CCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 36778999999999999999999999999998533210 1147788999999999999999999999999999
Q ss_pred Hh--------CCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHh------------------------------------
Q psy6102 354 LM--------EPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDL------------------------------------ 389 (426)
Q Consensus 354 ~l--------dp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l------------------------------------ 389 (426)
++ +|....+++.+|.++..+|++++|+..|++++++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (283)
T 3edt_B 155 EIYATRLGPDDPNVAKTKNNLASCYLKQGKYQDAETLYKEILTRAHEKEFGSVNGDNKPIWMHAEEREESKDKRRDSAPY 234 (283)
T ss_dssp HHHHHHSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHSSSCCSSCCCHHHHHHHHHHTTCCCCC----
T ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHhcCCchhHHHHH
Confidence 99 7888999999999999999999999999999987
Q ss_pred -------------CCCcHHHHHHHHHHHHHHhhHHHHHHHHHHhhhc
Q psy6102 390 -------------LPNDQQILKEIAFVRKQMRHHLNLEKMTYARMFQ 423 (426)
Q Consensus 390 -------------~P~n~~a~~~l~~i~~~l~~~~~a~k~~~~k~f~ 423 (426)
.|....++..++.++...++.+++.. .|++.+.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~-~~~~al~ 280 (283)
T 3edt_B 235 GEYGSWYKACKVDSPTVNTTLRSLGALYRRQGKLEAAHT-LEDCASR 280 (283)
T ss_dssp --------CCCCCCHHHHHHHHHHHHHHHHTTCHHHHHH-HHHHHHT
T ss_pred HHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCCHHHHHH-HHHHHHH
Confidence 25556788999999999999998876 4555443
No 148
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.23 E-value=1.1e-10 Score=119.43 Aligned_cols=134 Identities=13% Similarity=0.179 Sum_probs=124.0
Q ss_pred ccccchhhhHHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHH
Q psy6102 266 PLVLNQMEDVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRA 345 (426)
Q Consensus 266 P~~~i~ilk~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~A 345 (426)
|.........+..+..+|..++..|++++|+..|.++++. .|. ..++..+|.++..+|++++|
T Consensus 233 p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~~~~~----------------~~~-~~~~~~l~~~~~~~~~~~~A 295 (537)
T 3fp2_A 233 TVDDPLRENAALALCYTGIFHFLKNNLLDAQVLLQESINL----------------HPT-PNSYIFLALTLADKENSQEF 295 (537)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----------------CCC-HHHHHHHHHHTCCSSCCHHH
T ss_pred CCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHhc----------------CCC-chHHHHHHHHHHHhcCHHHH
Confidence 3333344456778999999999999999999999999998 888 89999999999999999999
Q ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhhHHHHHHH
Q psy6102 346 INLCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLNLEKM 416 (426)
Q Consensus 346 i~~~~~AL~ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~~~l~~i~~~l~~~~~a~k~ 416 (426)
+..++++++++|+++.+++.+|.++..+|++++|+..|+++++++|++..++..++.++...++.+++...
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~ 366 (537)
T 3fp2_A 296 FKFFQKAVDLNPEYPPTYYHRGQMYFILQDYKNAKEDFQKAQSLNPENVYPYIQLACLLYKQGKFTESEAF 366 (537)
T ss_dssp HHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCSHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999988753
No 149
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=99.23 E-value=1e-10 Score=98.77 Aligned_cols=133 Identities=13% Similarity=0.180 Sum_probs=113.0
Q ss_pred hHHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHH
Q psy6102 274 DVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDIL 353 (426)
Q Consensus 274 k~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL 353 (426)
..+..+..+|..++..|+|++|+.+|.+++++.+.... ......++.++|.++..+|++++|+..+++++
T Consensus 7 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~----------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~ 76 (164)
T 3ro3_A 7 AQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGD----------KAAERIAYSNLGNAYIFLGEFETASEYYKKTL 76 (164)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTC----------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCC----------chHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 35778999999999999999999999999998654321 23345799999999999999999999999999
Q ss_pred HhCCCC------HHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCC------cHHHHHHHHHHHHHHhhHHHHHHH
Q psy6102 354 LMEPNN------VKALFRRGRAQVSMNNFEQGLQDYEQALDLLPN------DQQILKEIAFVRKQMRHHLNLEKM 416 (426)
Q Consensus 354 ~ldp~~------~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~------n~~a~~~l~~i~~~l~~~~~a~k~ 416 (426)
.+.+.. ..+++.+|.++..+|++++|+..+++++.+.+. ...+...++.++..+++.+++...
T Consensus 77 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~ 151 (164)
T 3ro3_A 77 LLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHDQAMHF 151 (164)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred HHHHHhCCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHccchHhHHHHHHHHHHHHHHccCHHHHHHH
Confidence 886543 778999999999999999999999999987432 246788899999999999888653
No 150
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.23 E-value=4.2e-11 Score=95.30 Aligned_cols=95 Identities=13% Similarity=0.285 Sum_probs=90.9
Q ss_pred CcchHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCC--cHHHHHH
Q psy6102 322 RSYYTAALLNMAAVQLKFKAYKRAINLCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPN--DQQILKE 399 (426)
Q Consensus 322 ~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~--n~~a~~~ 399 (426)
+|.+..++..+|.++...|++++|+..++++++++|.+..+++.+|.++..+|++++|+..|+++++++|. +..++..
T Consensus 2 ~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~ 81 (112)
T 2kck_A 2 VDQNPEEYYLEGVLQYDAGNYTESIDLFEKAIQLDPEESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDVWAA 81 (112)
T ss_dssp CCSSTTGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccchHHHHHH
Confidence 67888899999999999999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred HHHHHHHH-hhHHHHHHH
Q psy6102 400 IAFVRKQM-RHHLNLEKM 416 (426)
Q Consensus 400 l~~i~~~l-~~~~~a~k~ 416 (426)
++.++..+ ++.+++...
T Consensus 82 l~~~~~~~~~~~~~A~~~ 99 (112)
T 2kck_A 82 KADALRYIEGKEVEAEIA 99 (112)
T ss_dssp HHHHHTTCSSCSHHHHHH
T ss_pred HHHHHHHHhCCHHHHHHH
Confidence 99999999 998887653
No 151
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.23 E-value=8.9e-11 Score=94.06 Aligned_cols=87 Identities=13% Similarity=0.208 Sum_probs=81.3
Q ss_pred hHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCc------HHHHH
Q psy6102 325 YTAALLNMAAVQLKFKAYKRAINLCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPND------QQILK 398 (426)
Q Consensus 325 ~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n------~~a~~ 398 (426)
.+..+.++|.+++..|+|++|+..|+++++++|+++.+++++|.++..+|++++|+++|+++++++|++ ..++.
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~ 82 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAEHVAIRSKLQY 82 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTTSHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCccHHHHHHHHHH
Confidence 467899999999999999999999999999999999999999999999999999999999999999999 88888
Q ss_pred HHHHHHHHHhhHH
Q psy6102 399 EIAFVRKQMRHHL 411 (426)
Q Consensus 399 ~l~~i~~~l~~~~ 411 (426)
.++.++..+++.+
T Consensus 83 ~~~~~~~~~~~~~ 95 (111)
T 2l6j_A 83 RLELAQGAVGSVQ 95 (111)
T ss_dssp HHHHHHHHHHCCC
T ss_pred HHHHHHHHHHhHh
Confidence 8888888877544
No 152
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.23 E-value=1.2e-10 Score=120.94 Aligned_cols=130 Identities=14% Similarity=0.134 Sum_probs=120.1
Q ss_pred HHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q psy6102 275 VIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILL 354 (426)
Q Consensus 275 ~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ 354 (426)
.+..+..+|..+++.|++++|+..|.++++. .|.+..+|..++.++.+.|++++|++.++++++
T Consensus 372 ~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~----------------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~ 435 (597)
T 2xpi_A 372 KAVTWLAVGIYYLCVNKISEARRYFSKSSTM----------------DPQFGPAWIGFAHSFAIEGEHDQAISAYTTAAR 435 (597)
T ss_dssp SHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----------------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhccHHHHHHHHHHHHHh----------------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 4567888999999999999999999999988 899999999999999999999999999999999
Q ss_pred hCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhhHHHHHHHHHHhh
Q psy6102 355 MEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLNLEKMTYARM 421 (426)
Q Consensus 355 ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~~~l~~i~~~l~~~~~a~k~~~~k~ 421 (426)
++|.+..+|+.+|.++...|++++|++.|+++++++|.+..++..++.++...++.+++.+ .|.++
T Consensus 436 ~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~-~~~~~ 501 (597)
T 2xpi_A 436 LFQGTHLPYLFLGMQHMQLGNILLANEYLQSSYALFQYDPLLLNELGVVAFNKSDMQTAIN-HFQNA 501 (597)
T ss_dssp TTTTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHH-HHHHH
T ss_pred hCccchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCHHHHHH-HHHHH
Confidence 9999999999999999999999999999999999999999999999999999999988865 44444
No 153
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=99.21 E-value=9.6e-11 Score=93.96 Aligned_cols=87 Identities=16% Similarity=0.298 Sum_probs=76.1
Q ss_pred CcchHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCC--cHHHHHH
Q psy6102 322 RSYYTAALLNMAAVQLKFKAYKRAINLCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPN--DQQILKE 399 (426)
Q Consensus 322 ~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~--n~~a~~~ 399 (426)
+|.++.+++++|.+++++|++++|+..++++++++|+++.+|+.+|.+|..+|++++|++.|++++++.|. +..+...
T Consensus 3 ~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~ 82 (100)
T 3ma5_A 3 DPEDPFTRYALAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREEGTQKDLSE 82 (100)
T ss_dssp --CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCHHHHHH
T ss_pred CccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcCCchhHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999874 4555566
Q ss_pred HHHHHHHHh
Q psy6102 400 IAFVRKQMR 408 (426)
Q Consensus 400 l~~i~~~l~ 408 (426)
+..++....
T Consensus 83 l~~~l~~~~ 91 (100)
T 3ma5_A 83 LQDAKLKAE 91 (100)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHcc
Confidence 655555443
No 154
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.18 E-value=1.7e-10 Score=114.07 Aligned_cols=133 Identities=14% Similarity=0.156 Sum_probs=116.1
Q ss_pred hHHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHH
Q psy6102 274 DVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDIL 353 (426)
Q Consensus 274 k~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL 353 (426)
..+..+..+|..++..|++++|+.+|.+|+++.+.... ..+....++.++|.++..+|++++|+..+++|+
T Consensus 141 ~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~---------~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al 211 (383)
T 3ulq_A 141 EKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEA---------YNIRLLQCHSLFATNFLDLKQYEDAISHFQKAY 211 (383)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCST---------THHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCcc---------chHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 46788999999999999999999999999998654321 124557899999999999999999999999999
Q ss_pred HhCCCC------HHHHHHHHHHHHHcCChHHHHHHHHHHHH-----hC-CCcHHHHHHHHHHHHHHhhHHHHHH
Q psy6102 354 LMEPNN------VKALFRRGRAQVSMNNFEQGLQDYEQALD-----LL-PNDQQILKEIAFVRKQMRHHLNLEK 415 (426)
Q Consensus 354 ~ldp~~------~kal~~lg~a~~~lg~~~~Al~~l~kAl~-----l~-P~n~~a~~~l~~i~~~l~~~~~a~k 415 (426)
++.+.. ..+++++|.+|..+|++++|+.+|++|++ .+ |....++..++.++..+++.++|..
T Consensus 212 ~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~ 285 (383)
T 3ulq_A 212 SMAEAEKQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKIDKAHE 285 (383)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHcCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHCCCHHHHHH
Confidence 886543 36899999999999999999999999999 46 8888999999999999999988865
No 155
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.17 E-value=4.7e-10 Score=116.57 Aligned_cols=146 Identities=15% Similarity=0.122 Sum_probs=114.6
Q ss_pred HHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhccc------------------chhhhhhhcCcchHHHHHHHHHHH
Q psy6102 275 VIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQS------------------QSKTQQKHFRSYYTAALLNMAAVQ 336 (426)
Q Consensus 275 ~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~------------------~~~~~~~~~~p~~~~~~~nlA~~~ 336 (426)
....|..+|..+.+.|++++|+..|+++++..+..... .......+..|.++.+|..+|.++
T Consensus 406 ~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~ 485 (597)
T 2xpi_A 406 FGPAWIGFAHSFAIEGEHDQAISAYTTAARLFQGTHLPYLFLGMQHMQLGNILLANEYLQSSYALFQYDPLLLNELGVVA 485 (597)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHH
Confidence 45677888888888888888888888887753321111 002334445788888999999999
Q ss_pred HHccCHHHHHHHHHHHHHh------CCCC-HHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhh
Q psy6102 337 LKFKAYKRAINLCDDILLM------EPNN-VKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRH 409 (426)
Q Consensus 337 ~~lg~~~~Ai~~~~~AL~l------dp~~-~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~~~l~~i~~~l~~ 409 (426)
.+.|++++|++.+++++++ +|++ ..+|..+|.++...|++++|++.|+++++++|++..++..++.++...++
T Consensus 486 ~~~g~~~~A~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~g~ 565 (597)
T 2xpi_A 486 FNKSDMQTAINHFQNALLLVKKTQSNEKPWAATWANLGHAYRKLKMYDAAIDALNQGLLLSTNDANVHTAIALVYLHKKI 565 (597)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHSCCCSGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHTTC
T ss_pred HHhCCHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCC
Confidence 9999999999999999888 6665 78999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHhh
Q psy6102 410 HLNLEKMTYARM 421 (426)
Q Consensus 410 ~~~a~k~~~~k~ 421 (426)
.+++.. .|+++
T Consensus 566 ~~~A~~-~~~~~ 576 (597)
T 2xpi_A 566 PGLAIT-HLHES 576 (597)
T ss_dssp HHHHHH-HHHHH
T ss_pred HHHHHH-HHHHH
Confidence 888765 34443
No 156
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.16 E-value=2.6e-11 Score=124.24 Aligned_cols=113 Identities=12% Similarity=0.127 Sum_probs=105.8
Q ss_pred hhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC--------
Q psy6102 288 KLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLMEPNN-------- 359 (426)
Q Consensus 288 ~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ldp~~-------- 359 (426)
..++|++|+..|.++++. .|..+.++.++|.+++++|+|++|+..|++||+++|.+
T Consensus 246 ~l~~~~~A~~~~~~~~~~----------------~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~ 309 (457)
T 1kt0_A 246 TLKSFEKAKESWEMDTKE----------------KLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKES 309 (457)
T ss_dssp EEEEEECCCCGGGSCHHH----------------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHH
T ss_pred hhhhcccCcchhhcCHHH----------------HHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHH
Confidence 556777888888888877 78889999999999999999999999999999999998
Q ss_pred -------HHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhhHHHHHHH
Q psy6102 360 -------VKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLNLEKM 416 (426)
Q Consensus 360 -------~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~~~l~~i~~~l~~~~~a~k~ 416 (426)
..+|+++|.||..+|+|++|+.+|++|++++|++..++..++.++..++++++|...
T Consensus 310 ~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~~g~a~~~~g~~~~A~~~ 373 (457)
T 1kt0_A 310 KASESFLLAAFLNLAMCYLKLREYTKAVECCDKALGLDSANEKGLYRRGEAQLLMNEFESAKGD 373 (457)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHccCHHHHHHH
Confidence 799999999999999999999999999999999999999999999999999988753
No 157
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.16 E-value=3.9e-10 Score=92.64 Aligned_cols=95 Identities=15% Similarity=0.175 Sum_probs=91.6
Q ss_pred CcchHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHH
Q psy6102 322 RSYYTAALLNMAAVQLKFKAYKRAINLCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIA 401 (426)
Q Consensus 322 ~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~~~l~ 401 (426)
.|.....++.+|.++++.|++++|+..++++++++|.+..+++.+|.++..+|++++|+..|+++++++|.+..++..++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la 91 (133)
T 2lni_A 12 NPDLALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKA 91 (133)
T ss_dssp SSCHHHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCchHHHHHHH
Confidence 68889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhHHHHHHH
Q psy6102 402 FVRKQMRHHLNLEKM 416 (426)
Q Consensus 402 ~i~~~l~~~~~a~k~ 416 (426)
.++..+++.+++.+.
T Consensus 92 ~~~~~~~~~~~A~~~ 106 (133)
T 2lni_A 92 AALEAMKDYTKAMDV 106 (133)
T ss_dssp HHHHHTTCHHHHHHH
T ss_pred HHHHHHhhHHHHHHH
Confidence 999999999988753
No 158
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.16 E-value=2.6e-10 Score=88.03 Aligned_cols=84 Identities=26% Similarity=0.353 Sum_probs=79.9
Q ss_pred HHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q psy6102 275 VIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILL 354 (426)
Q Consensus 275 ~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ 354 (426)
.+..+..+|..++..++|++|+..|.++++. .|.+..++.++|.++.++|++++|+.+++++++
T Consensus 8 ~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~----------------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~ 71 (91)
T 1na3_A 8 SAEAWYNLGNAYYKQGDYDEAIEYYQKALEL----------------DPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALE 71 (91)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHccCHHHHHHHHHHHHhc----------------CCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHh
Confidence 5678899999999999999999999999999 899999999999999999999999999999999
Q ss_pred hCCCCHHHHHHHHHHHHHcC
Q psy6102 355 MEPNNVKALFRRGRAQVSMN 374 (426)
Q Consensus 355 ldp~~~kal~~lg~a~~~lg 374 (426)
++|++..+++.+|.++..+|
T Consensus 72 ~~p~~~~~~~~l~~~~~~~g 91 (91)
T 1na3_A 72 LDPNNAEAKQNLGNAKQKQG 91 (91)
T ss_dssp HCTTCHHHHHHHHHHHHHHC
T ss_pred cCCCCHHHHHHHHHHHHhcC
Confidence 99999999999999998764
No 159
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.15 E-value=2.3e-10 Score=110.20 Aligned_cols=123 Identities=4% Similarity=-0.053 Sum_probs=76.6
Q ss_pred HHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHH-HHHHHHHHHHHccCHHHHHHHHHHHH
Q psy6102 275 VIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTA-ALLNMAAVQLKFKAYKRAINLCDDIL 353 (426)
Q Consensus 275 ~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~-~~~nlA~~~~~lg~~~~Ai~~~~~AL 353 (426)
.+..|...|..+...|++++|+..|++|+++ .|.+.. +|.++|.++.+.|++++|+..|++|+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~----------------~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~ 161 (308)
T 2ond_A 98 NMLLYFAYADYEESRMKYEKVHSIYNRLLAI----------------EDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAR 161 (308)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTS----------------SSSCTHHHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhcCCHHHHHHHHHHHHhc----------------cccCccHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 4456777777777778888888888888776 555544 56666666666666666666666666
Q ss_pred HhCCCCHHHHHHHHHHHHH-cCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhhHHHH
Q psy6102 354 LMEPNNVKALFRRGRAQVS-MNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLNL 413 (426)
Q Consensus 354 ~ldp~~~kal~~lg~a~~~-lg~~~~Al~~l~kAl~l~P~n~~a~~~l~~i~~~l~~~~~a 413 (426)
+++|.+..+|...+.+... +|++++|+..|+++++++|++..++..+..++..+++.+++
T Consensus 162 ~~~p~~~~~~~~~a~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~A 222 (308)
T 2ond_A 162 EDARTRHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNT 222 (308)
T ss_dssp TSTTCCTHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCHHHH
T ss_pred hcCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHH
Confidence 6666555555544444322 46666666666666666666666666666555555555444
No 160
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.15 E-value=2e-10 Score=116.39 Aligned_cols=123 Identities=15% Similarity=0.095 Sum_probs=94.3
Q ss_pred HHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC
Q psy6102 277 RTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLME 356 (426)
Q Consensus 277 ~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ld 356 (426)
..+..+|..++..|++++|+..|.++++. .|.+..++.++|.++.++|++++|+..+++++.++
T Consensus 339 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~----------------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~ 402 (514)
T 2gw1_A 339 FPYIQLACLAYRENKFDDCETLFSEAKRK----------------FPEAPEVPNFFAEILTDKNDFDKALKQYDLAIELE 402 (514)
T ss_dssp HHHHHHHHHTTTTTCHHHHHHHHHHHHHH----------------STTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHH----------------cccCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhh
Confidence 45666777777777777777777777776 67777778888888888888888888888888777
Q ss_pred CCCHH------HHHHHHHHHHH---cCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhhHHHHHH
Q psy6102 357 PNNVK------ALFRRGRAQVS---MNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLNLEK 415 (426)
Q Consensus 357 p~~~k------al~~lg~a~~~---lg~~~~Al~~l~kAl~l~P~n~~a~~~l~~i~~~l~~~~~a~k 415 (426)
|++.. +++.+|.++.. +|++++|+..|++++.++|++..++..++.++...++.+++..
T Consensus 403 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~ 470 (514)
T 2gw1_A 403 NKLDGIYVGIAPLVGKATLLTRNPTVENFIEATNLLEKASKLDPRSEQAKIGLAQMKLQQEDIDEAIT 470 (514)
T ss_dssp HTSSSCSSCSHHHHHHHHHHHTSCCTTHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred hccchHHHHHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhcCHHHHHH
Confidence 77644 77888888887 7888888888888888888888887888888877777776654
No 161
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=99.15 E-value=3.5e-11 Score=95.25 Aligned_cols=89 Identities=12% Similarity=0.130 Sum_probs=49.2
Q ss_pred hccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHH-HHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC
Q psy6102 281 NSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTA-ALLNMAAVQLKFKAYKRAINLCDDILLMEPNN 359 (426)
Q Consensus 281 ~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~-~~~nlA~~~~~lg~~~~Ai~~~~~AL~ldp~~ 359 (426)
.+|..++..|+|++|+..|+++++. +|.+.. +++++|.++..+|++++|+.+|+++++++|++
T Consensus 5 ~~a~~~~~~~~~~~A~~~~~~al~~----------------~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~ 68 (99)
T 2kc7_A 5 KTIKELINQGDIENALQALEEFLQT----------------EPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDS 68 (99)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHH----------------CSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTS
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHH----------------CCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCc
Confidence 4455555555555555555555555 555555 55555555555555555555555555555555
Q ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCc
Q psy6102 360 VKALFRRGRAQVSMNNFEQGLQDYEQALDLLPND 393 (426)
Q Consensus 360 ~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n 393 (426)
..++++ +.+.+|+..|++++.++|++
T Consensus 69 ~~~~~~--------~~~~~a~~~~~~~~~~~p~~ 94 (99)
T 2kc7_A 69 PALQAR--------KMVMDILNFYNKDMYNQLEH 94 (99)
T ss_dssp THHHHH--------HHHHHHHHHHCCTTHHHHCC
T ss_pred HHHHHH--------HHHHHHHHHHHHHhccCccc
Confidence 555533 34445555555555555443
No 162
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.15 E-value=2.5e-10 Score=107.65 Aligned_cols=134 Identities=22% Similarity=0.181 Sum_probs=118.4
Q ss_pred hHHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHH
Q psy6102 274 DVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDIL 353 (426)
Q Consensus 274 k~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL 353 (426)
..+..+..+|..++..|++++|+.+|.+++++..... ....+....++.++|.++..+|++++|+..+++++
T Consensus 67 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~--------~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~ 138 (311)
T 3nf1_A 67 DVATMLNILALVYRDQNKYKDAANLLNDALAIREKTL--------GKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRAL 138 (311)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHh--------CCCChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHH
Confidence 3677899999999999999999999999999853321 01146778999999999999999999999999999
Q ss_pred HhC--------CCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHh--------CCCcHHHHHHHHHHHHHHhhHHHHHH
Q psy6102 354 LME--------PNNVKALFRRGRAQVSMNNFEQGLQDYEQALDL--------LPNDQQILKEIAFVRKQMRHHLNLEK 415 (426)
Q Consensus 354 ~ld--------p~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l--------~P~n~~a~~~l~~i~~~l~~~~~a~k 415 (426)
++. |....+++.+|.++..+|++++|++.|++++.+ .|....++..++.++..+++.+++..
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~ 216 (311)
T 3nf1_A 139 EIREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQAET 216 (311)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHHHTCHHHHHH
T ss_pred HHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 884 667889999999999999999999999999998 77788899999999999999998865
No 163
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.15 E-value=1.4e-10 Score=111.97 Aligned_cols=107 Identities=8% Similarity=0.043 Sum_probs=55.9
Q ss_pred HHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Q psy6102 276 IRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLM 355 (426)
Q Consensus 276 a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~l 355 (426)
+..+..+|..+.. |+|++|+.+|++|+++.+.... ......++.++|.++.++|+|++|+.+|++++.+
T Consensus 116 a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~----------~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 184 (307)
T 2ifu_A 116 AMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEER----------LRQAAELIGKASRLLVRQQKFDEAAASLQKEKSM 184 (307)
T ss_dssp HHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCC----------hhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 3444555555555 5555555555555555322110 1122445555666666666666666666666555
Q ss_pred CCCC------HHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcH
Q psy6102 356 EPNN------VKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQ 394 (426)
Q Consensus 356 dp~~------~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~ 394 (426)
.|.+ ..+++.+|.++..+|++++|+.+|++++ ++|...
T Consensus 185 ~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al-~~p~~~ 228 (307)
T 2ifu_A 185 YKEMENYPTCYKKCIAQVLVQLHRADYVAAQKCVRESY-SIPGFS 228 (307)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHT-TSTTST
T ss_pred HHHcCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHh-CCCCCC
Confidence 4332 2355555555555566666666666666 555554
No 164
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.15 E-value=3.3e-10 Score=106.73 Aligned_cols=135 Identities=18% Similarity=0.157 Sum_probs=118.4
Q ss_pred hHHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHH
Q psy6102 274 DVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDIL 353 (426)
Q Consensus 274 k~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL 353 (426)
..+..+..+|..++..|++++|+.+|.+++++..... ....|....++.++|.++..+|++++|+..+++++
T Consensus 109 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~--------~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~ 180 (311)
T 3nf1_A 109 AVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVL--------GKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRAL 180 (311)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhc--------CCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 3677899999999999999999999999999853320 01146778899999999999999999999999999
Q ss_pred Hh--------CCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHh------------------------------------
Q psy6102 354 LM--------EPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDL------------------------------------ 389 (426)
Q Consensus 354 ~l--------dp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l------------------------------------ 389 (426)
.+ +|....+++.+|.++..+|++++|+..|++++++
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (311)
T 3nf1_A 181 EIYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQAETLYKEILTRAHEREFGSVDDENKPIWMHAEEREECKGKQKDGTSF 260 (311)
T ss_dssp HHHHHTSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHC------CCHHHHHHHHHHC-------CCS
T ss_pred HHHHHHhCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHhcCchhhHHHH
Confidence 98 7788899999999999999999999999999985
Q ss_pred -------------CCCcHHHHHHHHHHHHHHhhHHHHHHH
Q psy6102 390 -------------LPNDQQILKEIAFVRKQMRHHLNLEKM 416 (426)
Q Consensus 390 -------------~P~n~~a~~~l~~i~~~l~~~~~a~k~ 416 (426)
+|.+..++..++.++...++.+++...
T Consensus 261 ~~a~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~ 300 (311)
T 3nf1_A 261 GEYGGWYKACKVDSPTVTTTLKNLGALYRRQGKFEAAETL 300 (311)
T ss_dssp CCCC---------CHHHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHhhcCCCCchHHHHHHHHHHHHHHCCCHHHHHHH
Confidence 466778999999999999999988763
No 165
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.14 E-value=2.6e-10 Score=98.82 Aligned_cols=93 Identities=16% Similarity=0.124 Sum_probs=88.3
Q ss_pred chHHHHHHHHHHHHHccCHHHHHHHHHHHHHh------------------CCCCHHHHHHHHHHHHHcCChHHHHHHHHH
Q psy6102 324 YYTAALLNMAAVQLKFKAYKRAINLCDDILLM------------------EPNNVKALFRRGRAQVSMNNFEQGLQDYEQ 385 (426)
Q Consensus 324 ~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~l------------------dp~~~kal~~lg~a~~~lg~~~~Al~~l~k 385 (426)
..+..+.++|..+++.|+|++|+..|+++|.+ +|.+..+|+++|.||..+|++++|+.++++
T Consensus 9 ~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~ 88 (162)
T 3rkv_A 9 KSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSSE 88 (162)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHH
Confidence 45778999999999999999999999999999 788889999999999999999999999999
Q ss_pred HHHhCCCcHHHHHHHHHHHHHHhhHHHHHHH
Q psy6102 386 ALDLLPNDQQILKEIAFVRKQMRHHLNLEKM 416 (426)
Q Consensus 386 Al~l~P~n~~a~~~l~~i~~~l~~~~~a~k~ 416 (426)
|++++|++..++..++.++..+++++++...
T Consensus 89 al~~~p~~~~a~~~~g~~~~~~g~~~~A~~~ 119 (162)
T 3rkv_A 89 VLKREETNEKALFRRAKARIAAWKLDEAEED 119 (162)
T ss_dssp HHHHSTTCHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHhcCCcchHHHHHHHHHHHHHhcHHHHHHH
Confidence 9999999999999999999999999988763
No 166
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.14 E-value=5e-10 Score=118.01 Aligned_cols=117 Identities=9% Similarity=0.026 Sum_probs=111.6
Q ss_pred HHHHHHhccchhhhhhh----------HHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHcc--CH
Q psy6102 275 VIRTIKNSGNEYFKLNR----------MHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFK--AY 342 (426)
Q Consensus 275 ~a~~~~~~G~~~f~~g~----------y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg--~~ 342 (426)
...+|..++..+...++ +++|+..|.++++. +|.+..+|.+|+.++.+++ ++
T Consensus 62 ~~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~----------------~pK~y~aW~hR~w~l~~l~~~~~ 125 (567)
T 1dce_A 62 FATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRV----------------NPKSYGTWHHRCWLLSRLPEPNW 125 (567)
T ss_dssp CHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHH----------------CTTCHHHHHHHHHHHHTCSSCCH
T ss_pred hHHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHh----------------CCCCHHHHHHHHHHHHHcccccH
Confidence 56778888888888888 99999999999999 9999999999999999999 77
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC-ChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHH
Q psy6102 343 KRAINLCDDILLMEPNNVKALFRRGRAQVSMN-NFEQGLQDYEQALDLLPNDQQILKEIAFVRKQM 407 (426)
Q Consensus 343 ~~Ai~~~~~AL~ldp~~~kal~~lg~a~~~lg-~~~~Al~~l~kAl~l~P~n~~a~~~l~~i~~~l 407 (426)
++|+++|+++|++||.|..||..|+.++..++ .+++|+++++++++++|+|..+|...+.+...+
T Consensus 126 ~~el~~~~k~l~~d~~N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p~n~saW~~r~~ll~~l 191 (567)
T 1dce_A 126 ARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQL 191 (567)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhccccccHHHHHHHHHHHcCCChHHHHHHHHHHHHHCCCCccHHHHHHHHHHhh
Confidence 99999999999999999999999999999999 999999999999999999999999999998886
No 167
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.14 E-value=1.2e-09 Score=87.30 Aligned_cols=92 Identities=13% Similarity=0.156 Sum_probs=87.9
Q ss_pred hHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q psy6102 325 YTAALLNMAAVQLKFKAYKRAINLCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVR 404 (426)
Q Consensus 325 ~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~~~l~~i~ 404 (426)
.+..++.+|.+++..|++++|+..+++++.++|.++.+++.+|.++..+|++++|+..++++++++|++..++..++.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~ 82 (118)
T 1elw_A 3 QVNELKEKGNKALSVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAAL 82 (118)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcccHHHHHHHHHHH
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhHHHHHHH
Q psy6102 405 KQMRHHLNLEKM 416 (426)
Q Consensus 405 ~~l~~~~~a~k~ 416 (426)
..+++.+++...
T Consensus 83 ~~~~~~~~A~~~ 94 (118)
T 1elw_A 83 EFLNRFEEAKRT 94 (118)
T ss_dssp HHTTCHHHHHHH
T ss_pred HHHhhHHHHHHH
Confidence 999999888753
No 168
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=99.12 E-value=3e-10 Score=100.80 Aligned_cols=131 Identities=12% Similarity=0.143 Sum_probs=111.5
Q ss_pred HHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q psy6102 275 VIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILL 354 (426)
Q Consensus 275 ~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ 354 (426)
.+..+..+|..++..|+|++|+.+|.+++++...... .+....++.++|.++..+|++++|+..+.+++.
T Consensus 25 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~----------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~ 94 (203)
T 3gw4_A 25 ASGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGD----------HTAEHRALHQVGMVERMAGNWDAARRCFLEERE 94 (203)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCC----------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCC----------cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 5778899999999999999999999999998544321 466788999999999999999999999999999
Q ss_pred h---CC----CCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCC--Cc----HHHHHHHHHHHHHHhhHHHHHH
Q psy6102 355 M---EP----NNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLP--ND----QQILKEIAFVRKQMRHHLNLEK 415 (426)
Q Consensus 355 l---dp----~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P--~n----~~a~~~l~~i~~~l~~~~~a~k 415 (426)
+ .+ ....+++++|.++..+|++++|+..+++++.+.+ .+ ..+...++.++...++.+++..
T Consensus 95 ~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~ 168 (203)
T 3gw4_A 95 LLASLPEDPLAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQADDQVAIACAFRGLGDLAQQEKNLLEAQQ 168 (203)
T ss_dssp HHHHSCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHcCccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHCcCHHHHHH
Confidence 8 34 3367899999999999999999999999998743 22 2345788999999999988764
No 169
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.12 E-value=5.5e-10 Score=106.63 Aligned_cols=134 Identities=13% Similarity=0.023 Sum_probs=109.3
Q ss_pred HHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHH-
Q psy6102 275 VIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDIL- 353 (426)
Q Consensus 275 ~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL- 353 (426)
....++..|..+...|+|++|+.+|.+|+++...... ......++.++|.+|..+|+|++|+.++++|+
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~----------~~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~ 183 (293)
T 2qfc_A 114 FLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGID----------VYQNLYIENAIANIYAENGYLKKGIDLFEQILK 183 (293)
T ss_dssp HHHHHHHHHHHHHTSSCHHHHHHHHHHHHTTCCCSSC----------TTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCc----------hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 4455677889999999999999999999986322110 12236799999999999999999999999999
Q ss_pred --HhCCCCH----HHHHHHHHHHHHcCChHHHHHHHHHHHHhCCC------cHHHHHHHHHHHHHHhhHHHHHHHHH
Q psy6102 354 --LMEPNNV----KALFRRGRAQVSMNNFEQGLQDYEQALDLLPN------DQQILKEIAFVRKQMRHHLNLEKMTY 418 (426)
Q Consensus 354 --~ldp~~~----kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~------n~~a~~~l~~i~~~l~~~~~a~k~~~ 418 (426)
+..|++. .+++++|.+|..+|+|++|+.+|++|+++.++ -..+...++.++..+++.+++....+
T Consensus 184 ~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~Ai~~~~ 260 (293)
T 2qfc_A 184 QLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYEEAEIEDAY 260 (293)
T ss_dssp HHHHSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCSSHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHhcCccccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHH
Confidence 4566643 79999999999999999999999999998643 26788999999999999888833333
No 170
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.12 E-value=1.8e-10 Score=103.35 Aligned_cols=95 Identities=7% Similarity=0.026 Sum_probs=89.7
Q ss_pred CcchHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCH----------------HHHHHHHHHHHHcCChHHHHHHHHH
Q psy6102 322 RSYYTAALLNMAAVQLKFKAYKRAINLCDDILLMEPNNV----------------KALFRRGRAQVSMNNFEQGLQDYEQ 385 (426)
Q Consensus 322 ~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ldp~~~----------------kal~~lg~a~~~lg~~~~Al~~l~k 385 (426)
.+..+..+..+|.++++.|+|++|+..|++++.+.|.++ .+++++|.++..+|++++|+.+|++
T Consensus 34 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~ 113 (198)
T 2fbn_A 34 KVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASK 113 (198)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 456688999999999999999999999999999999887 9999999999999999999999999
Q ss_pred HHHhCCCcHHHHHHHHHHHHHHhhHHHHHHH
Q psy6102 386 ALDLLPNDQQILKEIAFVRKQMRHHLNLEKM 416 (426)
Q Consensus 386 Al~l~P~n~~a~~~l~~i~~~l~~~~~a~k~ 416 (426)
+++++|++..++..++.++..+++++++...
T Consensus 114 al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~ 144 (198)
T 2fbn_A 114 VLKIDKNNVKALYKLGVANMYFGFLEEAKEN 144 (198)
T ss_dssp HHHHSTTCHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred HHHhCcccHHHHHHHHHHHHHcccHHHHHHH
Confidence 9999999999999999999999999988653
No 171
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.12 E-value=1.2e-09 Score=88.90 Aligned_cols=95 Identities=17% Similarity=0.278 Sum_probs=91.1
Q ss_pred CcchHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHH
Q psy6102 322 RSYYTAALLNMAAVQLKFKAYKRAINLCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIA 401 (426)
Q Consensus 322 ~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~~~l~ 401 (426)
+|....++..+|.++...|++++|+..+++++.++|.++.+++.+|.++..+|++++|+..+++++.++|.+..++..++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~ 87 (131)
T 2vyi_A 8 DSAEAERLKTEGNEQMKVENFEAAVHFYGKAIELNPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRMG 87 (131)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred chhhhHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccCHHHHHHHH
Confidence 57788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhHHHHHHH
Q psy6102 402 FVRKQMRHHLNLEKM 416 (426)
Q Consensus 402 ~i~~~l~~~~~a~k~ 416 (426)
.++..+++.+++...
T Consensus 88 ~~~~~~~~~~~A~~~ 102 (131)
T 2vyi_A 88 LALSSLNKHVEAVAY 102 (131)
T ss_dssp HHHHHTTCHHHHHHH
T ss_pred HHHHHhCCHHHHHHH
Confidence 999999999888763
No 172
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=99.11 E-value=8.6e-10 Score=108.99 Aligned_cols=108 Identities=15% Similarity=0.127 Sum_probs=97.0
Q ss_pred hHHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHH
Q psy6102 274 DVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDIL 353 (426)
Q Consensus 274 k~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL 353 (426)
..+..+..+|..+...|+|++|+.+|.+|+++.+.... .+....++.++|.+|..+|++++|+.++++++
T Consensus 180 ~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~----------~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al 249 (378)
T 3q15_A 180 RTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQN----------DRFIAISLLNIANSYDRSGDDQMAVEHFQKAA 249 (378)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCC----------HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 46788999999999999999999999999998654321 23457799999999999999999999999999
Q ss_pred H-----hCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCC
Q psy6102 354 L-----MEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLP 391 (426)
Q Consensus 354 ~-----ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P 391 (426)
. .+|..+.+++.+|.++..+|++++|+..+++++++.+
T Consensus 250 ~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 292 (378)
T 3q15_A 250 KVSREKVPDLLPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHIT 292 (378)
T ss_dssp HHHHHHCGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC
T ss_pred HHHHhhCChhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 9 7888899999999999999999999999999999854
No 173
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.11 E-value=7.6e-10 Score=109.35 Aligned_cols=107 Identities=13% Similarity=0.180 Sum_probs=96.1
Q ss_pred hHHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHH
Q psy6102 274 DVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDIL 353 (426)
Q Consensus 274 k~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL 353 (426)
..+..+..+|..+...|+|++|+.+|.+|+++.+.... .+....++.++|.+|..+|++++|+.++++|+
T Consensus 182 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~----------~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al 251 (383)
T 3ulq_A 182 RLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQ----------PQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAI 251 (383)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCC----------hHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 46778999999999999999999999999998654321 34556799999999999999999999999999
Q ss_pred H-----hC-CCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhC
Q psy6102 354 L-----ME-PNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLL 390 (426)
Q Consensus 354 ~-----ld-p~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~ 390 (426)
+ .+ |..+.+++++|.++..+|++++|+..+++|+++.
T Consensus 252 ~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 294 (383)
T 3ulq_A 252 AVFEESNILPSLPQAYFLITQIHYKLGKIDKAHEYHSKGMAYS 294 (383)
T ss_dssp HHHHHTTCGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHhhccchhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 9 46 8889999999999999999999999999999984
No 174
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=99.11 E-value=7e-10 Score=109.66 Aligned_cols=134 Identities=10% Similarity=0.084 Sum_probs=117.2
Q ss_pred hhHHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHH
Q psy6102 273 EDVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDI 352 (426)
Q Consensus 273 lk~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~A 352 (426)
...+..+..+|..++..|+++.|+.+|.+|+++.+.... ..+..+.++.++|.++..+|++++|++.+++|
T Consensus 138 ~~~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~---------~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~a 208 (378)
T 3q15_A 138 IEKAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHPL---------YSIRTIQSLFVIAGNYDDFKHYDKALPHLEAA 208 (378)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTT---------CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhCCC---------chhhHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 347888999999999999999999999999998544221 12346789999999999999999999999999
Q ss_pred HHhCC------CCHHHHHHHHHHHHHcCChHHHHHHHHHHHH-----hCCCcHHHHHHHHHHHHHHhhHHHHHH
Q psy6102 353 LLMEP------NNVKALFRRGRAQVSMNNFEQGLQDYEQALD-----LLPNDQQILKEIAFVRKQMRHHLNLEK 415 (426)
Q Consensus 353 L~ldp------~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~-----l~P~n~~a~~~l~~i~~~l~~~~~a~k 415 (426)
+++.+ ....+++++|.+|..+|++++|+.+|++|+. .+|....+...++.++..+++.++|..
T Consensus 209 l~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~ 282 (378)
T 3q15_A 209 LELAMDIQNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREKVPDLLPKVLFGLSWTLCKAGQTQKAFQ 282 (378)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHCCCHHHHHH
Confidence 98743 2367899999999999999999999999999 788889999999999999999998865
No 175
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=99.10 E-value=5.1e-10 Score=110.66 Aligned_cols=121 Identities=12% Similarity=0.132 Sum_probs=111.1
Q ss_pred hhHHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchH----HHHHHHHHHHHHccCHHHHHHH
Q psy6102 273 EDVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYT----AALLNMAAVQLKFKAYKRAINL 348 (426)
Q Consensus 273 lk~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~----~~~~nlA~~~~~lg~~~~Ai~~ 348 (426)
...+..+..+|..++..|+|++|+..|++++++ .|.+. .++..+|.++..+|++++|+.+
T Consensus 45 ~~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~----------------~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~ 108 (411)
T 4a1s_A 45 SSMCLELALEGERLCNAGDCRAGVAFFQAAIQA----------------GTEDLRTLSAIYSQLGNAYFYLGDYNKAMQY 108 (411)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----------------CCSCHHHHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHh----------------cccChhHHHHHHHHHHHHHHHCCCHHHHHHH
Confidence 346778889999999999999999999999998 66654 6899999999999999999999
Q ss_pred HHHHHHh------CCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHh------CCCcHHHHHHHHHHHHHHhh
Q psy6102 349 CDDILLM------EPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDL------LPNDQQILKEIAFVRKQMRH 409 (426)
Q Consensus 349 ~~~AL~l------dp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l------~P~n~~a~~~l~~i~~~l~~ 409 (426)
+++++.+ +|....+++.+|.++..+|++++|+..|++++.+ .|....++..++.++..+++
T Consensus 109 ~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 181 (411)
T 4a1s_A 109 HKHDLTLAKSMNDRLGEAKSSGNLGNTLKVMGRFDEAAICCERHLTLARQLGDRLSEGRALYNLGNVYHAKGK 181 (411)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHcCc
Confidence 9999998 6788999999999999999999999999999999 56677899999999999999
No 176
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.10 E-value=1.3e-09 Score=91.46 Aligned_cols=96 Identities=9% Similarity=0.054 Sum_probs=91.5
Q ss_pred cCcchHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC---HHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHH
Q psy6102 321 FRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLMEPNN---VKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQIL 397 (426)
Q Consensus 321 ~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ldp~~---~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~ 397 (426)
..|.....++.+|.+++..|++++|+..++++++++|++ ..+++.+|.++..+|++++|+..|++++.++|++..++
T Consensus 23 ~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~ 102 (148)
T 2dba_A 23 PGASSVEQLRKEGNELFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGDVKAL 102 (148)
T ss_dssp TTCCCHHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCCHHHH
T ss_pred cchHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccCHHHH
Confidence 367889999999999999999999999999999999998 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhHHHHHHH
Q psy6102 398 KEIAFVRKQMRHHLNLEKM 416 (426)
Q Consensus 398 ~~l~~i~~~l~~~~~a~k~ 416 (426)
..++.++..+++++++...
T Consensus 103 ~~~a~~~~~~~~~~~A~~~ 121 (148)
T 2dba_A 103 YRRSQALEKLGRLDQAVLD 121 (148)
T ss_dssp HHHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHH
Confidence 9999999999999988653
No 177
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.08 E-value=2.3e-09 Score=100.48 Aligned_cols=87 Identities=9% Similarity=0.086 Sum_probs=53.6
Q ss_pred hHHHHHHHHHHHHH----ccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH----cCChHHHHHHHHHHHHhCCCcHHH
Q psy6102 325 YTAALLNMAAVQLK----FKAYKRAINLCDDILLMEPNNVKALFRRGRAQVS----MNNFEQGLQDYEQALDLLPNDQQI 396 (426)
Q Consensus 325 ~~~~~~nlA~~~~~----lg~~~~Ai~~~~~AL~ldp~~~kal~~lg~a~~~----lg~~~~Al~~l~kAl~l~P~n~~a 396 (426)
++.+++++|.++.. .+++++|+.+++++++++ ++.+++.+|.+|.. .+++++|+..|++|+++. +..+
T Consensus 73 ~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~--~~~a 148 (273)
T 1ouv_A 73 YSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLK--YAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLN--DGDG 148 (273)
T ss_dssp CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTT--CHHH
T ss_pred CHHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHcC--CccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhcC--cHHH
Confidence 45666666666666 666666666666666653 56666666666666 666666666666666654 4556
Q ss_pred HHHHHHHHHH----HhhHHHHHH
Q psy6102 397 LKEIAFVRKQ----MRHHLNLEK 415 (426)
Q Consensus 397 ~~~l~~i~~~----l~~~~~a~k 415 (426)
...++.++.. .++.+++..
T Consensus 149 ~~~lg~~~~~~~~~~~~~~~A~~ 171 (273)
T 1ouv_A 149 CTILGSLYDAGRGTPKDLKKALA 171 (273)
T ss_dssp HHHHHHHHHHTSSSCCCHHHHHH
T ss_pred HHHHHHHHHcCCCCCCCHHHHHH
Confidence 6666666665 555555543
No 178
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=99.07 E-value=9.2e-10 Score=107.78 Aligned_cols=131 Identities=13% Similarity=0.163 Sum_probs=114.8
Q ss_pred HHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q psy6102 275 VIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILL 354 (426)
Q Consensus 275 ~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ 354 (426)
.+..+..+|..++..|+|++|+.+|.+++++.+.... .+....++.++|.++..+|++++|+.++++++.
T Consensus 186 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~----------~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 255 (406)
T 3sf4_A 186 QGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGD----------KAAERRAYSNLGNAYIFLGEFETASEYYKKTLL 255 (406)
T ss_dssp HHHHHHHHHHHHHHHTBHHHHHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcCC----------cHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHH
Confidence 5678899999999999999999999999998654321 234466999999999999999999999999999
Q ss_pred hCCCC------HHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCc------HHHHHHHHHHHHHHhhHHHHHH
Q psy6102 355 MEPNN------VKALFRRGRAQVSMNNFEQGLQDYEQALDLLPND------QQILKEIAFVRKQMRHHLNLEK 415 (426)
Q Consensus 355 ldp~~------~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n------~~a~~~l~~i~~~l~~~~~a~k 415 (426)
+.|.. ..+++.+|.++..+|++++|+..|++++.+.+.. ..++..++.++..+++.+++..
T Consensus 256 ~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~ 328 (406)
T 3sf4_A 256 LARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELNDRIGEGRACWSLGNAYTALGNHDQAMH 328 (406)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHH
T ss_pred HHHhCcCchHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 98766 8899999999999999999999999999986544 6788899999999999988865
No 179
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.07 E-value=3.6e-09 Score=85.26 Aligned_cols=94 Identities=20% Similarity=0.308 Sum_probs=87.5
Q ss_pred Ccch-HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHH
Q psy6102 322 RSYY-TAALLNMAAVQLKFKAYKRAINLCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEI 400 (426)
Q Consensus 322 ~p~~-~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~~~l 400 (426)
+|.. ..+++.+|.++...|++++|+..+++++.++|.+..+++.+|.++...|++++|+..|++++.++|.+..++..+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l 83 (125)
T 1na0_A 4 DPGNSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNL 83 (125)
T ss_dssp ---CHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred CccccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHH
Confidence 4444 789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhHHHHHH
Q psy6102 401 AFVRKQMRHHLNLEK 415 (426)
Q Consensus 401 ~~i~~~l~~~~~a~k 415 (426)
+.++...++.+++..
T Consensus 84 a~~~~~~~~~~~A~~ 98 (125)
T 1na0_A 84 GNAYYKQGDYDEAIE 98 (125)
T ss_dssp HHHHHHTTCHHHHHH
T ss_pred HHHHHHhcCHHHHHH
Confidence 999999999988865
No 180
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.07 E-value=3.8e-10 Score=107.80 Aligned_cols=130 Identities=14% Similarity=0.060 Sum_probs=106.1
Q ss_pred HHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Q psy6102 276 IRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLM 355 (426)
Q Consensus 276 a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~l 355 (426)
+..+..+|..++..++|++|+.+|.+|+++...... ......++.++|.+|..+|+|++|+.++++|+++
T Consensus 115 ~~~~~~l~~~~~~~~~~~~Ai~~~~~al~~~~~~~~----------~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~ 184 (293)
T 3u3w_A 115 LQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGID----------VYQNLYIENAIANIYAENGYLKKGIDLFEQILKQ 184 (293)
T ss_dssp HHHHHHHHHHHTTSSCHHHHHHHHHHHHHTCCCCSC----------TTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcccCHHHHHHHHHHHHHHhccccc----------HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 445556899999999999999999999996221110 1123568999999999999999999999999953
Q ss_pred -------CCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCc------HHHHHHHHHHHHHHhh-HHHHHH
Q psy6102 356 -------EPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPND------QQILKEIAFVRKQMRH-HLNLEK 415 (426)
Q Consensus 356 -------dp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n------~~a~~~l~~i~~~l~~-~~~a~k 415 (426)
.+....+++++|.+|..+|+|++|+.++++|+++.+.. ..++..++.++..+++ +++|..
T Consensus 185 ~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~~A~~ 258 (293)
T 3u3w_A 185 LEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYEEAEIED 258 (293)
T ss_dssp HHHSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCTTHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred HHhcccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhCCcHHHHHH
Confidence 23346789999999999999999999999999987554 7899999999999995 466653
No 181
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=99.07 E-value=1.2e-09 Score=107.08 Aligned_cols=132 Identities=17% Similarity=0.195 Sum_probs=115.8
Q ss_pred HHHHHHhccchhhhhhh--------------------HHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHH
Q psy6102 275 VIRTIKNSGNEYFKLNR--------------------MHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAA 334 (426)
Q Consensus 275 ~a~~~~~~G~~~f~~g~--------------------y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~ 334 (426)
.+..+..+|..++..|+ |++|+.+|.+++++...... .+....++.++|.
T Consensus 126 ~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~~~~~~----------~~~~~~~~~~la~ 195 (406)
T 3sf4_A 126 EARALYNLGNVYHAKGKSFGCPGPQDVGEFPEEVRDALQAAVDFYEENLSLVTALGD----------RAAQGRAFGNLGN 195 (406)
T ss_dssp HHHHHHHHHHHHHHHHHTCC-------CCCCHHHHHHHHHHHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCcccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHHhccC----------cHHHHHHHHHHHH
Confidence 56789999999999999 99999999999998654321 4566789999999
Q ss_pred HHHHccCHHHHHHHHHHHHHhCCCCH------HHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCc------HHHHHHHHH
Q psy6102 335 VQLKFKAYKRAINLCDDILLMEPNNV------KALFRRGRAQVSMNNFEQGLQDYEQALDLLPND------QQILKEIAF 402 (426)
Q Consensus 335 ~~~~lg~~~~Ai~~~~~AL~ldp~~~------kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n------~~a~~~l~~ 402 (426)
++..+|++++|+..+++++++.+... .+++.+|.++..+|++++|+..|++++.+.|.. ..++..++.
T Consensus 196 ~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~ 275 (406)
T 3sf4_A 196 THYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGN 275 (406)
T ss_dssp HHHHHTBHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHccCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhCcCchHHHHHHHHHHH
Confidence 99999999999999999999876553 399999999999999999999999999998766 678899999
Q ss_pred HHHHHhhHHHHHHH
Q psy6102 403 VRKQMRHHLNLEKM 416 (426)
Q Consensus 403 i~~~l~~~~~a~k~ 416 (426)
++...++.+++...
T Consensus 276 ~~~~~g~~~~A~~~ 289 (406)
T 3sf4_A 276 TYTLLQDYEKAIDY 289 (406)
T ss_dssp HHHHTTCHHHHHHH
T ss_pred HHHHhCcHHHHHHH
Confidence 99999999888653
No 182
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=99.06 E-value=9.1e-10 Score=108.85 Aligned_cols=132 Identities=16% Similarity=0.186 Sum_probs=105.8
Q ss_pred hHHHHHHhccchhhhhhh-----------------HHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHH
Q psy6102 274 DVIRTIKNSGNEYFKLNR-----------------MHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQ 336 (426)
Q Consensus 274 k~a~~~~~~G~~~f~~g~-----------------y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~ 336 (426)
..+..+..+|..+...|+ |++|+.+|.+++++...... .+....++.++|.++
T Consensus 164 ~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~~~~~~----------~~~~~~~~~~la~~~ 233 (411)
T 4a1s_A 164 SEGRALYNLGNVYHAKGKHLGQRNPGKFGDDVKEALTRAVEFYQENLKLMRDLGD----------RGAQGRACGNLGNTY 233 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTC----------HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCcccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHcCC----------HHHHHHHHHHHHHHH
Confidence 357788999999999999 99999999999988544321 355667888888888
Q ss_pred HHccCHHHHHHHHHHHHHhCCCCH------HHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCc------HHHHHHHHHHH
Q psy6102 337 LKFKAYKRAINLCDDILLMEPNNV------KALFRRGRAQVSMNNFEQGLQDYEQALDLLPND------QQILKEIAFVR 404 (426)
Q Consensus 337 ~~lg~~~~Ai~~~~~AL~ldp~~~------kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n------~~a~~~l~~i~ 404 (426)
..+|++++|+.++++++++.+... .+++.+|.++..+|++++|+..|++++.+.|.. ..++..++.++
T Consensus 234 ~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~ 313 (411)
T 4a1s_A 234 YLLGDFQAAIEHHQERLRIAREFGDRAAERRANSNLGNSHIFLGQFEDAAEHYKRTLALAVELGEREVEAQSCYSLGNTY 313 (411)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHcCChHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 888888888888888888776443 388888888888888888888888888887744 56777888888
Q ss_pred HHHhhHHHHHH
Q psy6102 405 KQMRHHLNLEK 415 (426)
Q Consensus 405 ~~l~~~~~a~k 415 (426)
...++.+++..
T Consensus 314 ~~~g~~~~A~~ 324 (411)
T 4a1s_A 314 TLLHEFNTAIE 324 (411)
T ss_dssp HHTTCHHHHHH
T ss_pred HHcCCHHHHHH
Confidence 88888877754
No 183
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.06 E-value=2.5e-09 Score=88.00 Aligned_cols=89 Identities=20% Similarity=0.258 Sum_probs=84.6
Q ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCH---HHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCc---HHHHHHH
Q psy6102 327 AALLNMAAVQLKFKAYKRAINLCDDILLMEPNNV---KALFRRGRAQVSMNNFEQGLQDYEQALDLLPND---QQILKEI 400 (426)
Q Consensus 327 ~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ldp~~~---kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n---~~a~~~l 400 (426)
..++++|.++++.|+|++|+..++++++.+|++. .+++.+|.++..+|++++|+..|++++.++|++ ..++..+
T Consensus 3 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~l 82 (129)
T 2xev_A 3 RTAYNVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLLKL 82 (129)
T ss_dssp CCHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHHHHHH
Confidence 3578899999999999999999999999999998 899999999999999999999999999999999 8999999
Q ss_pred HHHHHHHhhHHHHHH
Q psy6102 401 AFVRKQMRHHLNLEK 415 (426)
Q Consensus 401 ~~i~~~l~~~~~a~k 415 (426)
+.++..+++.+++..
T Consensus 83 a~~~~~~g~~~~A~~ 97 (129)
T 2xev_A 83 GLSQYGEGKNTEAQQ 97 (129)
T ss_dssp HHHHHHTTCHHHHHH
T ss_pred HHHHHHcCCHHHHHH
Confidence 999999999998875
No 184
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=99.06 E-value=2.3e-09 Score=104.24 Aligned_cols=119 Identities=10% Similarity=-0.028 Sum_probs=78.5
Q ss_pred HHHHHHhccchhhhhh--hHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHH----HHc---cCHHHH
Q psy6102 275 VIRTIKNSGNEYFKLN--RMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQ----LKF---KAYKRA 345 (426)
Q Consensus 275 ~a~~~~~~G~~~f~~g--~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~----~~l---g~~~~A 345 (426)
...+|..++..+...+ ++++|+..+.++|.. +|.+..+|..|+.++ ..+ ++++++
T Consensus 66 ~~taWn~R~~~L~~l~~~~~~eeL~~~~~~L~~----------------nPk~y~aW~~R~~iL~~~~~~l~~~~~~~~E 129 (306)
T 3dra_A 66 HYTIWIYRFNILKNLPNRNLYDELDWCEEIALD----------------NEKNYQIWNYRQLIIGQIMELNNNDFDPYRE 129 (306)
T ss_dssp CHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHH----------------CTTCCHHHHHHHHHHHHHHHHTTTCCCTHHH
T ss_pred HHHHHHHHHHHHHHcccccHHHHHHHHHHHHHH----------------CcccHHHHHHHHHHHHHHHHhccccCCHHHH
Confidence 5677888999999888 999999999999997 555555555555555 444 455555
Q ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHcCChH--HHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhh
Q psy6102 346 INLCDDILLMEPNNVKALFRRGRAQVSMNNFE--QGLQDYEQALDLLPNDQQILKEIAFVRKQMRH 409 (426)
Q Consensus 346 i~~~~~AL~ldp~~~kal~~lg~a~~~lg~~~--~Al~~l~kAl~l~P~n~~a~~~l~~i~~~l~~ 409 (426)
+..++++|+++|.|..+|+.++.++..+++++ +++++++++++++|.|-.++.....+...+++
T Consensus 130 L~~~~~~l~~~pkny~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~~N~sAW~~R~~ll~~l~~ 195 (306)
T 3dra_A 130 FDILEAMLSSDPKNHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDLKNNSAWSHRFFLLFSKKH 195 (306)
T ss_dssp HHHHHHHHHHCTTCHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHSSGG
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccc
Confidence 55555555555555555555555555555555 55555555555555555555555555554443
No 185
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.05 E-value=1.6e-09 Score=103.50 Aligned_cols=94 Identities=16% Similarity=0.046 Sum_probs=89.9
Q ss_pred cchHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHH
Q psy6102 323 SYYTAALLNMAAVQLKFKAYKRAINLCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAF 402 (426)
Q Consensus 323 p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~~~l~~ 402 (426)
|..+..+..+|.++++.|+|++|+..|+++++++|+++.+|+++|.+|..+|++++|+.+|++|++++|++..++..++.
T Consensus 1 p~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~ 80 (281)
T 2c2l_A 1 SPSAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQ 80 (281)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHH
T ss_pred ChhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhHHHHHHH
Q psy6102 403 VRKQMRHHLNLEKM 416 (426)
Q Consensus 403 i~~~l~~~~~a~k~ 416 (426)
++..+++++++...
T Consensus 81 ~~~~~g~~~~A~~~ 94 (281)
T 2c2l_A 81 CQLEMESYDEAIAN 94 (281)
T ss_dssp HHHHTTCHHHHHHH
T ss_pred HHHHcCCHHHHHHH
Confidence 99999999988763
No 186
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.05 E-value=8.3e-10 Score=106.29 Aligned_cols=112 Identities=9% Similarity=0.099 Sum_probs=96.9
Q ss_pred HHHHHHHHHHHHH-HHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHH-HHHHHHHH
Q psy6102 292 MHDAQRKYKKAVR-YIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLMEPNNVK-ALFRRGRA 369 (426)
Q Consensus 292 y~~Ai~~y~kAl~-~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ldp~~~k-al~~lg~a 369 (426)
+++|+..|.+|++ + .|.+..+|.++|.++.++|++++|+..|+++|+++|.++. +|..+|.+
T Consensus 80 ~~~A~~~~~rAl~~~----------------~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~ 143 (308)
T 2ond_A 80 SDEAANIYERAISTL----------------LKKNMLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKF 143 (308)
T ss_dssp HHHHHHHHHHHHTTT----------------TTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSSSSCTHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHh----------------CcccHHHHHHHHHHHHhcCCHHHHHHHHHHHHhccccCccHHHHHHHHH
Confidence 5999999999999 6 8999999999999999999999999999999999999987 99999999
Q ss_pred HHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH-HhhHHHHHHHHHHh
Q psy6102 370 QVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQ-MRHHLNLEKMTYAR 420 (426)
Q Consensus 370 ~~~lg~~~~Al~~l~kAl~l~P~n~~a~~~l~~i~~~-l~~~~~a~k~~~~k 420 (426)
+..+|++++|+..|++|+++.|.+..++.....+... .++.+++. ..|.+
T Consensus 144 ~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~a~~~~~~~~~~~~A~-~~~~~ 194 (308)
T 2ond_A 144 ARRAEGIKSGRMIFKKAREDARTRHHVYVTAALMEYYCSKDKSVAF-KIFEL 194 (308)
T ss_dssp HHHHHCHHHHHHHHHHHHTSTTCCTHHHHHHHHHHHHTSCCHHHHH-HHHHH
T ss_pred HHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCHHHHH-HHHHH
Confidence 9999999999999999999999988777655555432 45555554 34443
No 187
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.05 E-value=6e-10 Score=106.39 Aligned_cols=108 Identities=8% Similarity=0.093 Sum_probs=94.1
Q ss_pred hHHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHH
Q psy6102 274 DVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDIL 353 (426)
Q Consensus 274 k~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL 353 (426)
..+..+..+|..|+..|+|++|+.+|.+|++...... ...+....+++++|.+|.++|+|++|+.++++|+
T Consensus 153 ~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~---------~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al 223 (293)
T 3u3w_A 153 QNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALH---------DNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAI 223 (293)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSS---------CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcc---------cchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 3566799999999999999999999999999865431 1145667899999999999999999999999999
Q ss_pred HhCCCC------HHHHHHHHHHHHHcCC-hHHHHHHHHHHHHhC
Q psy6102 354 LMEPNN------VKALFRRGRAQVSMNN-FEQGLQDYEQALDLL 390 (426)
Q Consensus 354 ~ldp~~------~kal~~lg~a~~~lg~-~~~Al~~l~kAl~l~ 390 (426)
++.+.. +.+|+++|.++..+|+ +++|+++|++|+.+.
T Consensus 224 ~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~~A~~~~~~Al~i~ 267 (293)
T 3u3w_A 224 EISCRINSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFF 267 (293)
T ss_dssp HHHHHTTBCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHcCcHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHH
Confidence 987544 8999999999999995 699999999999863
No 188
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=99.05 E-value=1.1e-09 Score=103.54 Aligned_cols=119 Identities=14% Similarity=0.161 Sum_probs=106.2
Q ss_pred HHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcch----HHHHHHHHHHHHHccCHHHHHHHHH
Q psy6102 275 VIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYY----TAALLNMAAVQLKFKAYKRAINLCD 350 (426)
Q Consensus 275 ~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~----~~~~~nlA~~~~~lg~~~~Ai~~~~ 350 (426)
.+..+...|..++..|+|++|+..|+++++. .|.+ ..++..+|.++..+|++++|+..++
T Consensus 4 ~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~----------------~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~ 67 (338)
T 3ro2_A 4 SCLELALEGERLCKSGDCRAGVSFFEAAVQV----------------GTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHH 67 (338)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----------------CCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHhh----------------CcccHHHHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 3557788999999999999999999999998 5555 5789999999999999999999999
Q ss_pred HHHHh------CCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCc------HHHHHHHHHHHHHHhh
Q psy6102 351 DILLM------EPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPND------QQILKEIAFVRKQMRH 409 (426)
Q Consensus 351 ~AL~l------dp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n------~~a~~~l~~i~~~l~~ 409 (426)
+++.+ .|....+++.+|.++..+|++++|+..+++++++.|.. ..++..++.++..+++
T Consensus 68 ~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 138 (338)
T 3ro2_A 68 HDLTLARTIGDQLGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGK 138 (338)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhcccccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHcCc
Confidence 99988 55668899999999999999999999999999987644 3488889999998888
No 189
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.05 E-value=7.2e-10 Score=106.89 Aligned_cols=130 Identities=13% Similarity=0.115 Sum_probs=104.9
Q ss_pred HHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCc-chHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q psy6102 276 IRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRS-YYTAALLNMAAVQLKFKAYKRAINLCDDILL 354 (426)
Q Consensus 276 a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p-~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ 354 (426)
+..+..+|..+...|+|++|+.+|.+|+++..... ++ ....++.++|.+|.. |++++|+.+|++|++
T Consensus 76 a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g-----------~~~~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~ 143 (307)
T 2ifu_A 76 AKAFEQAGMMLKDLQRMPEAVQYIEKASVMYVENG-----------TPDTAAMALDRAGKLMEP-LDLSKAVHLYQQAAA 143 (307)
T ss_dssp HHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTT-----------CHHHHHHHHHHHHHHHTT-TCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHcC-----------CHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHH
Confidence 44667788888888888888888888888844322 22 346788999999988 999999999999998
Q ss_pred hCCCC------HHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcH------HHHHHHHHHHHHHhhHHHHHHHH
Q psy6102 355 MEPNN------VKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQ------QILKEIAFVRKQMRHHLNLEKMT 417 (426)
Q Consensus 355 ldp~~------~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~------~a~~~l~~i~~~l~~~~~a~k~~ 417 (426)
+.|.. ..++.++|.+|..+|++++|+.+|++++.+.|.+. .++..++.++..+++..++....
T Consensus 144 ~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~ 218 (307)
T 2ifu_A 144 VFENEERLRQAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEMENYPTCYKKCIAQVLVQLHRADYVAAQKCV 218 (307)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHhCCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 87654 67899999999999999999999999999999885 36667777777788888887743
No 190
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.05 E-value=4e-09 Score=90.10 Aligned_cols=92 Identities=17% Similarity=0.122 Sum_probs=88.3
Q ss_pred chHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHH
Q psy6102 324 YYTAALLNMAAVQLKFKAYKRAINLCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFV 403 (426)
Q Consensus 324 ~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~~~l~~i 403 (426)
..+..+..+|.+++..|++++|+..+.+++.++|.+..+++.+|.++..+|++++|+..|+++++++|.+..++..++.+
T Consensus 11 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~ 90 (166)
T 1a17_A 11 KRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAAS 90 (166)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHH
Confidence 34678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhHHHHHH
Q psy6102 404 RKQMRHHLNLEK 415 (426)
Q Consensus 404 ~~~l~~~~~a~k 415 (426)
+..+++.+++..
T Consensus 91 ~~~~~~~~~A~~ 102 (166)
T 1a17_A 91 NMALGKFRAALR 102 (166)
T ss_dssp HHHTTCHHHHHH
T ss_pred HHHhccHHHHHH
Confidence 999999998875
No 191
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=99.04 E-value=7.8e-09 Score=101.45 Aligned_cols=117 Identities=9% Similarity=0.021 Sum_probs=105.4
Q ss_pred HHHHHHhccchhhhhhh----------HHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccC--H
Q psy6102 275 VIRTIKNSGNEYFKLNR----------MHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKA--Y 342 (426)
Q Consensus 275 ~a~~~~~~G~~~f~~g~----------y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~--~ 342 (426)
...+|..++..+...+. +++++..+.+++.. +|.+..+|..|+.++.+++. +
T Consensus 63 ~ytaWn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~~~L~~----------------~PKny~aW~hR~wlL~~l~~~~~ 126 (331)
T 3dss_A 63 FATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRV----------------NPKSYGTWHHRCWLLSRLPEPNW 126 (331)
T ss_dssp CHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHH----------------CTTCHHHHHHHHHHHHHCSSCCH
T ss_pred hHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHh----------------CCCCHHHHHHHHHHHhccCcccH
Confidence 44556666666655554 78999999999988 99999999999999999994 9
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC-hHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHH
Q psy6102 343 KRAINLCDDILLMEPNNVKALFRRGRAQVSMNN-FEQGLQDYEQALDLLPNDQQILKEIAFVRKQM 407 (426)
Q Consensus 343 ~~Ai~~~~~AL~ldp~~~kal~~lg~a~~~lg~-~~~Al~~l~kAl~l~P~n~~a~~~l~~i~~~l 407 (426)
++++..|+++|+++|.|..||..++.++..++. ++++++++.++++.+|.|..++..+..+...+
T Consensus 127 ~~EL~~~~k~l~~dprNy~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~N~SAW~~R~~ll~~l 192 (331)
T 3dss_A 127 ARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQL 192 (331)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999 59999999999999999999999999999887
No 192
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=99.04 E-value=8.3e-10 Score=107.38 Aligned_cols=132 Identities=6% Similarity=-0.054 Sum_probs=116.0
Q ss_pred HHHHHHhccchh----hhh---hhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHH--HH
Q psy6102 275 VIRTIKNSGNEY----FKL---NRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYK--RA 345 (426)
Q Consensus 275 ~a~~~~~~G~~~----f~~---g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~--~A 345 (426)
....|..++..+ ... +++++++..+.++++. +|.+..+|..|+.+..+++.++ ++
T Consensus 102 ~y~aW~~R~~iL~~~~~~l~~~~~~~~EL~~~~~~l~~----------------~pkny~aW~~R~~vl~~l~~~~~~~E 165 (306)
T 3dra_A 102 NYQIWNYRQLIIGQIMELNNNDFDPYREFDILEAMLSS----------------DPKNHHVWSYRKWLVDTFDLHNDAKE 165 (306)
T ss_dssp CCHHHHHHHHHHHHHHHHTTTCCCTHHHHHHHHHHHHH----------------CTTCHHHHHHHHHHHHHTTCTTCHHH
T ss_pred cHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHh----------------CCCCHHHHHHHHHHHHHhcccChHHH
Confidence 344555566555 444 7899999999999999 9999999999999999999999 99
Q ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHcCC------hHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhhHHHHHHHHHH
Q psy6102 346 INLCDDILLMEPNNVKALFRRGRAQVSMNN------FEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLNLEKMTYA 419 (426)
Q Consensus 346 i~~~~~AL~ldp~~~kal~~lg~a~~~lg~------~~~Al~~l~kAl~l~P~n~~a~~~l~~i~~~l~~~~~a~k~~~~ 419 (426)
++.++++|+++|.|..||..|+.++..+++ ++++++++++++.++|+|..++..+..+....++..++......
T Consensus 166 L~~~~~~i~~d~~N~sAW~~R~~ll~~l~~~~~~~~~~eEl~~~~~aI~~~p~n~SaW~y~~~ll~~~~~~~~~~~~~~~ 245 (306)
T 3dra_A 166 LSFVDKVIDTDLKNNSAWSHRFFLLFSKKHLATDNTIDEELNYVKDKIVKCPQNPSTWNYLLGIHERFDRSITQLEEFSL 245 (306)
T ss_dssp HHHHHHHHHHCTTCHHHHHHHHHHHHSSGGGCCHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCCGGGGHHHHH
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHhccccchhhhHHHHHHHHHHHHHhCCCCccHHHHHHHHHHhcCCChHHHHHHHH
Confidence 999999999999999999999999999998 99999999999999999999999999999998876555555555
Q ss_pred hhh
Q psy6102 420 RMF 422 (426)
Q Consensus 420 k~f 422 (426)
+++
T Consensus 246 ~~~ 248 (306)
T 3dra_A 246 QFV 248 (306)
T ss_dssp TTE
T ss_pred HHH
Confidence 544
No 193
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=99.04 E-value=1.6e-09 Score=85.53 Aligned_cols=77 Identities=18% Similarity=0.336 Sum_probs=69.9
Q ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHH-HHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHH--HHHHHHHH
Q psy6102 329 LLNMAAVQLKFKAYKRAINLCDDILLMEPNNVK-ALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQIL--KEIAFVRK 405 (426)
Q Consensus 329 ~~nlA~~~~~lg~~~~Ai~~~~~AL~ldp~~~k-al~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~--~~l~~i~~ 405 (426)
.+++|.++++.|++++|+..++++++++|+++. +++.+|.++..+|++++|+++|+++++++|++..++ ..+..+..
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~a~~ 82 (99)
T 2kc7_A 3 QLKTIKELINQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQARKMVMDILN 82 (99)
T ss_dssp THHHHHHHHHHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHH
Confidence 367899999999999999999999999999999 999999999999999999999999999999999887 44444443
No 194
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=99.03 E-value=1.8e-09 Score=93.74 Aligned_cols=107 Identities=14% Similarity=0.218 Sum_probs=95.4
Q ss_pred hhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHcc---CHHHHHHHHHHHHHhC-C-CCHH
Q psy6102 287 FKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFK---AYKRAINLCDDILLME-P-NNVK 361 (426)
Q Consensus 287 f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg---~~~~Ai~~~~~AL~ld-p-~~~k 361 (426)
........+.+.|.+++.. ++.+..+.+++|+|+.+.. +.++++..++.+++.+ | .+.+
T Consensus 9 l~~~~l~~~~~~y~~e~~~----------------~~~~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd 72 (152)
T 1pc2_A 9 VSVEDLLKFEKKFQSEKAA----------------GSVSKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRD 72 (152)
T ss_dssp CCHHHHHHHHHHHHHHHHT----------------TCCCHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHcc----------------CCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHH
Confidence 3445667778888888776 7889999999999999988 7779999999999999 7 6799
Q ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhh
Q psy6102 362 ALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRH 409 (426)
Q Consensus 362 al~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~~~l~~i~~~l~~ 409 (426)
++|++|.+++.+++|++|+++++++|+++|+|.++......+...+.+
T Consensus 73 ~lY~LAv~~~kl~~Y~~A~~y~~~lL~ieP~n~QA~~Lk~~ie~~~~k 120 (152)
T 1pc2_A 73 YVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELERLIDKAMKK 120 (152)
T ss_dssp HHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999888876643
No 195
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=99.03 E-value=1.7e-09 Score=102.17 Aligned_cols=132 Identities=13% Similarity=0.161 Sum_probs=115.0
Q ss_pred hHHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHH
Q psy6102 274 DVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDIL 353 (426)
Q Consensus 274 k~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL 353 (426)
..+..+..+|..++..|++++|+.+|.+++++.+.... .+....++.++|.++..+|++++|+..+++++
T Consensus 181 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~----------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al 250 (338)
T 3ro2_A 181 AQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGD----------KAAERRAYSNLGNAYIFLGEFETASEYYKKTL 250 (338)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTC----------HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCC----------hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 35678899999999999999999999999998654321 23446699999999999999999999999999
Q ss_pred HhCCCC------HHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCc------HHHHHHHHHHHHHHhhHHHHHH
Q psy6102 354 LMEPNN------VKALFRRGRAQVSMNNFEQGLQDYEQALDLLPND------QQILKEIAFVRKQMRHHLNLEK 415 (426)
Q Consensus 354 ~ldp~~------~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n------~~a~~~l~~i~~~l~~~~~a~k 415 (426)
.+.+.. ..+++.+|.++..+|++++|+..|++++.+.|.. ..++..++.++..+++.+++..
T Consensus 251 ~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~ 324 (338)
T 3ro2_A 251 LLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHDQAMH 324 (338)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHH
T ss_pred HHHHhhcchhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCChHHHHH
Confidence 987766 8899999999999999999999999999986643 4588899999999999998875
No 196
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.03 E-value=2.2e-09 Score=87.45 Aligned_cols=92 Identities=10% Similarity=0.095 Sum_probs=87.1
Q ss_pred chHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCc-------HHH
Q psy6102 324 YYTAALLNMAAVQLKFKAYKRAINLCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPND-------QQI 396 (426)
Q Consensus 324 ~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n-------~~a 396 (426)
..+..+..+|.++...|++++|+..+++++.++|.++.+++.+|.++..+|++++|+..|++++.+.|.+ ..+
T Consensus 2 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~ 81 (131)
T 1elr_A 2 KQALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKA 81 (131)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHHH
Confidence 3467899999999999999999999999999999999999999999999999999999999999999887 899
Q ss_pred HHHHHHHHHHHhhHHHHHH
Q psy6102 397 LKEIAFVRKQMRHHLNLEK 415 (426)
Q Consensus 397 ~~~l~~i~~~l~~~~~a~k 415 (426)
+..++.++..+++.+++..
T Consensus 82 ~~~la~~~~~~~~~~~A~~ 100 (131)
T 1elr_A 82 YARIGNSYFKEEKYKDAIH 100 (131)
T ss_dssp HHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHhccHHHHHH
Confidence 9999999999999988865
No 197
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.02 E-value=6.2e-09 Score=97.53 Aligned_cols=120 Identities=15% Similarity=0.225 Sum_probs=100.6
Q ss_pred HHhccchhhh----hhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHH----ccCHHHHHHHHH
Q psy6102 279 IKNSGNEYFK----LNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLK----FKAYKRAINLCD 350 (426)
Q Consensus 279 ~~~~G~~~f~----~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~----lg~~~~Ai~~~~ 350 (426)
+..+|..+.. .+++++|+.+|++|++. .++.+++++|.+|.. .+++++|+.+++
T Consensus 77 ~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~------------------~~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~ 138 (273)
T 1ouv_A 77 CHLLGNLYYSGQGVSQNTNKALQYYSKACDL------------------KYAEGCASLGGIYHDGKVVTRDFKKAVEYFT 138 (273)
T ss_dssp HHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT------------------TCHHHHHHHHHHHHHCSSSCCCHHHHHHHHH
T ss_pred HHHHHHHHhCCCCcccCHHHHHHHHHHHHHc------------------CCccHHHHHHHHHHcCCCcccCHHHHHHHHH
Confidence 4556666666 66666666666666654 368899999999999 999999999999
Q ss_pred HHHHhCCCCHHHHHHHHHHHHH----cCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH----HhhHHHHHHHHHHhh
Q psy6102 351 DILLMEPNNVKALFRRGRAQVS----MNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQ----MRHHLNLEKMTYARM 421 (426)
Q Consensus 351 ~AL~ldp~~~kal~~lg~a~~~----lg~~~~Al~~l~kAl~l~P~n~~a~~~l~~i~~~----l~~~~~a~k~~~~k~ 421 (426)
++++++ ++.+++++|.+|.. .+++++|+..|++++++ ++..+...++.++.. .++.+++.. .|++.
T Consensus 139 ~a~~~~--~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~--~~~~a~~~lg~~~~~g~~~~~~~~~A~~-~~~~a 212 (273)
T 1ouv_A 139 KACDLN--DGDGCTILGSLYDAGRGTPKDLKKALASYDKACDL--KDSPGCFNAGNMYHHGEGATKNFKEALA-RYSKA 212 (273)
T ss_dssp HHHHTT--CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTCSSCCCHHHHHH-HHHHH
T ss_pred HHHhcC--cHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCCccHHHHHH-HHHHH
Confidence 999986 78999999999999 99999999999999988 568999999999999 888888875 34443
No 198
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.00 E-value=3.4e-09 Score=106.83 Aligned_cols=165 Identities=13% Similarity=0.069 Sum_probs=116.4
Q ss_pred echhhccccHHHHHhhchhhCCcccccchhhhHHHHHHhccchhh--hhhhHHHHHHHHHHHHHHHHhhccc--------
Q psy6102 243 FGCVRQGFGVAREVSYVEAENDKPLVLNQMEDVIRTIKNSGNEYF--KLNRMHDAQRKYKKAVRYIKWYNQS-------- 312 (426)
Q Consensus 243 FG~VieGldvl~~I~~l~~~~~~P~~~i~ilk~a~~~~~~G~~~f--~~g~y~~Ai~~y~kAl~~~~~~~~~-------- 312 (426)
.|+..+....+++...+......+.. ...+..+..+|..+. ..++|++|+.+|++|+++.|.....
T Consensus 107 ~g~~~~A~~~~~ka~~i~~~~~~~~~----~~~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~p~~~~~~~~~~~~~ 182 (472)
T 4g1t_A 107 MGRLSDVQIYVDKVKHVCEKFSSPYR----IESPELDCEEGWTRLKCGGNQNERAKVCFEKALEKKPKNPEFTSGLAIAS 182 (472)
T ss_dssp TTCHHHHHHHHHHHHHHHHHSCCSSC----CCCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSTTCHHHHHHHHHHH
T ss_pred cCChHHHHHHHHHHHHHhHhcccccc----hhhHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 34444444445544444332222111 123455666665554 4578999999999999874432211
Q ss_pred -------------chhhhhhhcCcchHHHHHHHHHHHHHc----cCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC
Q psy6102 313 -------------QSKTQQKHFRSYYTAALLNMAAVQLKF----KAYKRAINLCDDILLMEPNNVKALFRRGRAQVSMNN 375 (426)
Q Consensus 313 -------------~~~~~~~~~~p~~~~~~~nlA~~~~~l----g~~~~Ai~~~~~AL~ldp~~~kal~~lg~a~~~lg~ 375 (426)
.....+.+++|.+..++.++|.++..+ +++++|++.+++++.++|.+..+++++|.+|..+|+
T Consensus 183 ~~l~~~~~~~~al~~~~~al~l~p~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~~al~~~~~~~~~~~~lg~~~~~~~~ 262 (472)
T 4g1t_A 183 YRLDNWPPSQNAIDPLRQAIRLNPDNQYLKVLLALKLHKMREEGEEEGEGEKLVEEALEKAPGVTDVLRSAAKFYRRKDE 262 (472)
T ss_dssp HHHHHSCCCCCTHHHHHHHHHHCSSCHHHHHHHHHHHHHCC------CHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTC
T ss_pred HHhcCchHHHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHcCc
Confidence 113455677899999998888777654 577889999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhhHH
Q psy6102 376 FEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHL 411 (426)
Q Consensus 376 ~~~Al~~l~kAl~l~P~n~~a~~~l~~i~~~l~~~~ 411 (426)
+++|+..|++|++++|++..++..++.++.......
T Consensus 263 ~~~A~~~~~~al~~~p~~~~~~~~lg~~y~~~~~~~ 298 (472)
T 4g1t_A 263 PDKAIELLKKALEYIPNNAYLHCQIGCCYRAKVFQV 298 (472)
T ss_dssp HHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999998887654443
No 199
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.98 E-value=3.7e-09 Score=109.38 Aligned_cols=136 Identities=14% Similarity=0.064 Sum_probs=111.0
Q ss_pred hhhHHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHH
Q psy6102 272 MEDVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDD 351 (426)
Q Consensus 272 ilk~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~ 351 (426)
+...+....+.+..+..+|+|++|+..|.++|++....- -.-.|..+..+.++|.+|..+|+|++|+..+++
T Consensus 305 ~l~~a~~~le~a~~~~~qg~~~eA~~l~~~aL~~~~~~l--------g~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~ 376 (490)
T 3n71_A 305 MIQFSKDTLEKIDKARSEGLYHEVVKLCRECLEKQEPVF--------ADTNLYVLRLLSIASEVLSYLQAYEEASHYARR 376 (490)
T ss_dssp HHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTTB--------CTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhc--------CCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 344556667777788899999999999999999843211 122567788999999999999999999999999
Q ss_pred HHHh-----CCCC---HHHHHHHHHHHHHcCChHHHHHHHHHHHHh-----CCCcH---HHHHHHHHHHHHHhhHHHHHH
Q psy6102 352 ILLM-----EPNN---VKALFRRGRAQVSMNNFEQGLQDYEQALDL-----LPNDQ---QILKEIAFVRKQMRHHLNLEK 415 (426)
Q Consensus 352 AL~l-----dp~~---~kal~~lg~a~~~lg~~~~Al~~l~kAl~l-----~P~n~---~a~~~l~~i~~~l~~~~~a~k 415 (426)
+|++ -|++ ...+.++|.+|..+|++++|+..|++|+++ -|+++ ++..++..++..++++++++.
T Consensus 377 aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~~~~~ae~ 456 (490)
T 3n71_A 377 MVDGYMKLYHHNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAILLVTHGPSHPITKDLEAMRMQTEMELRMFRQNEF 456 (490)
T ss_dssp HHHHHHHHSCTTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9976 3455 668999999999999999999999999985 46665 455678888888888888875
No 200
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=98.96 E-value=2.9e-09 Score=89.65 Aligned_cols=108 Identities=19% Similarity=0.278 Sum_probs=93.0
Q ss_pred HHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q psy6102 275 VIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILL 354 (426)
Q Consensus 275 ~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ 354 (426)
.+..+..+|..++..|++++|+.+|.+++++.+.... .+....++.++|.++..+|++++|+..+++++.
T Consensus 48 ~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~----------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~ 117 (164)
T 3ro3_A 48 ERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKD----------RAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLA 117 (164)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCC----------cHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 4678899999999999999999999999998654321 234477899999999999999999999999998
Q ss_pred hCC------CCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCC
Q psy6102 355 MEP------NNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPN 392 (426)
Q Consensus 355 ldp------~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~ 392 (426)
+.+ ....+++.+|.++..+|++++|+..+++++++...
T Consensus 118 ~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 161 (164)
T 3ro3_A 118 IAQELKDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLEISRE 161 (164)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT
T ss_pred HHHHccchHhHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH
Confidence 743 23678999999999999999999999999987544
No 201
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=98.95 E-value=2.1e-08 Score=95.49 Aligned_cols=131 Identities=13% Similarity=0.024 Sum_probs=108.7
Q ss_pred HHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q psy6102 275 VIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILL 354 (426)
Q Consensus 275 ~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ 354 (426)
....+...+..++..++|++|+..|.++++..+... ........++.+|.++...|++++|+..+++++.
T Consensus 74 ~~~~l~~~~~~~~~~~~y~~A~~~~~~~l~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~ 143 (293)
T 2qfc_A 74 RKKQFKDQVIMLCKQKRYKEIYNKVWNELKKEEYHP----------EFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLN 143 (293)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCCCH----------HHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHhccccCCh----------hHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH
Confidence 456677889999999999999999999998722100 0123345677899999999999999999999998
Q ss_pred hCCCC------HHHHHHHHHHHHHcCChHHHHHHHHHHH---HhCCCcH----HHHHHHHHHHHHHhhHHHHHH
Q psy6102 355 MEPNN------VKALFRRGRAQVSMNNFEQGLQDYEQAL---DLLPNDQ----QILKEIAFVRKQMRHHLNLEK 415 (426)
Q Consensus 355 ldp~~------~kal~~lg~a~~~lg~~~~Al~~l~kAl---~l~P~n~----~a~~~l~~i~~~l~~~~~a~k 415 (426)
+.+.. ..+++.+|.+|..+|++++|+.+|++|+ +..|++. .++.+++.++..++++++|..
T Consensus 144 ~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~Al~ 217 (293)
T 2qfc_A 144 QQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLY 217 (293)
T ss_dssp TCCCSSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHhcCCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHHHhhHHHHHH
Confidence 76544 6799999999999999999999999999 5567654 688999999999999998875
No 202
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=98.94 E-value=1.1e-08 Score=107.78 Aligned_cols=106 Identities=10% Similarity=0.064 Sum_probs=99.8
Q ss_pred HHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccC----------HHHHHHHHHHHHHhCCCCHH
Q psy6102 292 MHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKA----------YKRAINLCDDILLMEPNNVK 361 (426)
Q Consensus 292 y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~----------~~~Ai~~~~~AL~ldp~~~k 361 (426)
.++|+..|.++|.. +|.+..+|+.|+.++..+++ +++|++.++++|+.+|++..
T Consensus 45 ~eeal~~~~~~l~~----------------nP~~~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~~pK~y~ 108 (567)
T 1dce_A 45 DESVLELTSQILGA----------------NPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYG 108 (567)
T ss_dssp SHHHHHHHHHHHHH----------------CTTCHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTTCHH
T ss_pred CHHHHHHHHHHHHH----------------CchhHHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHhCCCCHH
Confidence 45789999999999 99999999999999999999 99999999999999999999
Q ss_pred HHHHHHHHHHHcC--ChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHh-hHHHH
Q psy6102 362 ALFRRGRAQVSMN--NFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMR-HHLNL 413 (426)
Q Consensus 362 al~~lg~a~~~lg--~~~~Al~~l~kAl~l~P~n~~a~~~l~~i~~~l~-~~~~a 413 (426)
+|+.|+.++..++ ++++|+++++++++++|.|..+|...+.+...++ ..+++
T Consensus 109 aW~hR~w~l~~l~~~~~~~el~~~~k~l~~d~~N~~aW~~R~~~l~~l~~~~~~e 163 (567)
T 1dce_A 109 TWHHRCWLLSRLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEE 163 (567)
T ss_dssp HHHHHHHHHHTCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTCCCHHHH
T ss_pred HHHHHHHHHHHcccccHHHHHHHHHHHHhhccccccHHHHHHHHHHHcCCChHHH
Confidence 9999999999999 6699999999999999999999999999999998 55444
No 203
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=98.93 E-value=3.3e-09 Score=96.71 Aligned_cols=130 Identities=13% Similarity=0.000 Sum_probs=90.7
Q ss_pred HHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhh----------cccc--h-------hhhhhhcCcchHHHHHHHHHH
Q psy6102 275 VIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWY----------NQSQ--S-------KTQQKHFRSYYTAALLNMAAV 335 (426)
Q Consensus 275 ~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~----------~~~~--~-------~~~~~~~~p~~~~~~~nlA~~ 335 (426)
.+..++.+|..++..+++++|+.+|++|++.-... .... + .+.. .++.++.+++++|.+
T Consensus 17 ~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~g~~~a~~~lg~~y~~~g~~~~~~~A~~~~~~A--~~~g~~~a~~~Lg~~ 94 (212)
T 3rjv_A 17 DRRAQYYLADTWVSSGDYQKAEYWAQKAAAQGDGDALALLAQLKIRNPQQADYPQARQLAEKA--VEAGSKSGEIVLARV 94 (212)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCHHHHHHHHHHTTSSTTSCCHHHHHHHHHHH--HHTTCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCCCHHHHHHHHHHH--HHCCCHHHHHHHHHH
Confidence 34556666666666666666666666666531000 0000 0 0111 245677888888888
Q ss_pred HHH----ccCHHHHHHHHHHHHHhCC--CCHHHHHHHHHHHHH----cCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Q psy6102 336 QLK----FKAYKRAINLCDDILLMEP--NNVKALFRRGRAQVS----MNNFEQGLQDYEQALDLLPNDQQILKEIAFVRK 405 (426)
Q Consensus 336 ~~~----lg~~~~Ai~~~~~AL~ldp--~~~kal~~lg~a~~~----lg~~~~Al~~l~kAl~l~P~n~~a~~~l~~i~~ 405 (426)
|.. .+++++|+.++++++++.| .++.+++++|.+|.. .+++++|+..|++|+++ |.++.+...++.++.
T Consensus 95 y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~-~~~~~a~~~Lg~~y~ 173 (212)
T 3rjv_A 95 LVNRQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL-SRTGYAEYWAGMMFQ 173 (212)
T ss_dssp HTCGGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT-SCTTHHHHHHHHHHH
T ss_pred HHcCCCCccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc-CCCHHHHHHHHHHHH
Confidence 887 7888888888888888887 458888888888888 78888888888888888 778888888888877
Q ss_pred HH
Q psy6102 406 QM 407 (426)
Q Consensus 406 ~l 407 (426)
.-
T Consensus 174 ~g 175 (212)
T 3rjv_A 174 QG 175 (212)
T ss_dssp HC
T ss_pred cC
Confidence 64
No 204
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=98.93 E-value=1.4e-09 Score=95.80 Aligned_cols=114 Identities=9% Similarity=-0.088 Sum_probs=92.4
Q ss_pred HHHHHHhccchhhhhhhHHHHHHHHHHHHHHHH---------------hhcc---cchhhhhhhcCcchHHHHHHHHHHH
Q psy6102 275 VIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIK---------------WYNQ---SQSKTQQKHFRSYYTAALLNMAAVQ 336 (426)
Q Consensus 275 ~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~---------------~~~~---~~~~~~~~~~~p~~~~~~~nlA~~~ 336 (426)
.+..+..+|..+...|++++|+..|++++...+ .... ....+.....+|.+..+++++|.++
T Consensus 39 ~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~P~~~~~~~~la~~~ 118 (176)
T 2r5s_A 39 RGDVKLAKADCLLETKQFELAQELLATIPLEYQDNSYKSLIAKLELHQQAAESPELKRLEQELAANPDNFELACELAVQY 118 (176)
T ss_dssp SHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGCCHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHSTTCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHCCCHHHHHHHHHHhhhccCChHHHHHHHHHHHHhhcccchHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 456778888888888888888888877755422 0000 0112344556899999999999999
Q ss_pred HHccCHHHHHHHHHHHHHhCCCC--HHHHHHHHHHHHHcCChHHHHHHHHHHHH
Q psy6102 337 LKFKAYKRAINLCDDILLMEPNN--VKALFRRGRAQVSMNNFEQGLQDYEQALD 388 (426)
Q Consensus 337 ~~lg~~~~Ai~~~~~AL~ldp~~--~kal~~lg~a~~~lg~~~~Al~~l~kAl~ 388 (426)
..+|++++|+..++++++++|++ ..+++.+|.++..+|+.++|+..|++++.
T Consensus 119 ~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~A~~~y~~al~ 172 (176)
T 2r5s_A 119 NQVGRDEEALELLWNILKVNLGAQDGEVKKTFMDILSALGQGNAIASKYRRQLY 172 (176)
T ss_dssp HHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred HHcccHHHHHHHHHHHHHhCcccChHHHHHHHHHHHHHhCCCCcHHHHHHHHHH
Confidence 99999999999999999999976 66999999999999999999999999975
No 205
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=98.93 E-value=4.2e-09 Score=96.03 Aligned_cols=107 Identities=9% Similarity=-0.073 Sum_probs=85.7
Q ss_pred HHhccchhhh----hhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCc--chHHHHHHHHHHHHH----ccCHHHHHHH
Q psy6102 279 IKNSGNEYFK----LNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRS--YYTAALLNMAAVQLK----FKAYKRAINL 348 (426)
Q Consensus 279 ~~~~G~~~f~----~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p--~~~~~~~nlA~~~~~----lg~~~~Ai~~ 348 (426)
+..+|..|+. .+++++|+.+|.+|++. .+ .++.+++++|.+|.. .+++++|+.+
T Consensus 88 ~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~----------------~~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~ 151 (212)
T 3rjv_A 88 EIVLARVLVNRQAGATDVAHAITLLQDAARD----------------SESDAAVDAQMLLGLIYASGVHGPEDDVKASEY 151 (212)
T ss_dssp HHHHHHHHTCGGGSSCCHHHHHHHHHHHTSS----------------TTSHHHHHHHHHHHHHHHHTSSSSCCHHHHHHH
T ss_pred HHHHHHHHHcCCCCccCHHHHHHHHHHHHHc----------------CCCcchHHHHHHHHHHHHcCCCCCCCHHHHHHH
Confidence 4455555555 55666666666666554 66 459999999999999 8999999999
Q ss_pred HHHHHHhCCCCHHHHHHHHHHHHHc-C-----ChHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q psy6102 349 CDDILLMEPNNVKALFRRGRAQVSM-N-----NFEQGLQDYEQALDLLPNDQQILKEIAFVR 404 (426)
Q Consensus 349 ~~~AL~ldp~~~kal~~lg~a~~~l-g-----~~~~Al~~l~kAl~l~P~n~~a~~~l~~i~ 404 (426)
+++|+++ |.++.+++++|.+|... | ++++|+..|++|++. .+..+...+..+.
T Consensus 152 ~~~A~~~-~~~~~a~~~Lg~~y~~g~gg~~~~d~~~A~~~~~~A~~~--g~~~A~~~l~~l~ 210 (212)
T 3rjv_A 152 FKGSSSL-SRTGYAEYWAGMMFQQGEKGFIEPNKQKALHWLNVSCLE--GFDTGCEEFDRIS 210 (212)
T ss_dssp HHHHHHT-SCTTHHHHHHHHHHHHCBTTTBCCCHHHHHHHHHHHHHH--TCHHHHHHHHHHH
T ss_pred HHHHHHc-CCCHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHc--CCHHHHHHHHHhh
Confidence 9999999 77888999999999864 3 999999999999998 5677777776654
No 206
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=98.92 E-value=5.5e-10 Score=109.75 Aligned_cols=103 Identities=10% Similarity=0.027 Sum_probs=60.2
Q ss_pred HHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC
Q psy6102 277 RTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLME 356 (426)
Q Consensus 277 ~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ld 356 (426)
..+.++|..+++.++|++|+.+|++||++ +|.+..+|+++|.+|+.+|++++|+.+|+++++++
T Consensus 231 ~~~~nla~~~~~~g~~~~A~~~~~~al~~----------------~p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~ 294 (338)
T 2if4_A 231 PCHLNIAACLIKLKRYDEAIGHCNIVLTE----------------EEKNPKALFRRGKAKAELGQMDSARDDFRKAQKYA 294 (338)
T ss_dssp HHHHHHHHHHHTTTCCHHHHHHHHHHHHH----------------CTTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC--
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHh----------------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHC
Confidence 37889999999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHH-HHHcCChHHHHHHHHHHHHhCCCcHH
Q psy6102 357 PNNVKALFRRGRA-QVSMNNFEQGLQDYEQALDLLPNDQQ 395 (426)
Q Consensus 357 p~~~kal~~lg~a-~~~lg~~~~Al~~l~kAl~l~P~n~~ 395 (426)
|++..++..++.+ ....+..+++...|.+++...|+++.
T Consensus 295 p~~~~a~~~L~~l~~~~~~~~~~a~~~~~~~l~~~p~~~~ 334 (338)
T 2if4_A 295 PDDKAIRRELRALAEQEKALYQKQKEMYKGIFKGKDEGGA 334 (338)
T ss_dssp ----------------------------------------
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCC
Confidence 9999999999999 45567888999999999999998764
No 207
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=98.91 E-value=5e-10 Score=115.44 Aligned_cols=103 Identities=14% Similarity=0.210 Sum_probs=92.9
Q ss_pred HHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q psy6102 275 VIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILL 354 (426)
Q Consensus 275 ~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ 354 (426)
.+..+..+|..+++.|+|++|+..|++|+++ +|.++.+++++|.+|.++|++++|+++++++++
T Consensus 39 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l----------------~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~ 102 (477)
T 1wao_1 39 NAIYYGNRSLAYLRTECYGYALGDATRAIEL----------------DKKYIKGYYRRAASNMALGKFRAALRDYETVVK 102 (477)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHS----------------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh----------------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 3678999999999999999999999999999 999999999999999999999999999999999
Q ss_pred hCCCCHHHHHHHHHH--HHHcCChHHHHHHHH-----------HHHHhCCCc
Q psy6102 355 MEPNNVKALFRRGRA--QVSMNNFEQGLQDYE-----------QALDLLPND 393 (426)
Q Consensus 355 ldp~~~kal~~lg~a--~~~lg~~~~Al~~l~-----------kAl~l~P~n 393 (426)
++|++..++..++.+ +..+|++++|++.++ +++.++|+.
T Consensus 103 ~~p~~~~~~~~l~~~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~al~~~~~~ 154 (477)
T 1wao_1 103 VKPHDKDAKMKYQECNKIVKQKAFERAIAGDEHKRSVVDSLDIESMTIEDEY 154 (477)
T ss_dssp HSTTCTTHHHHHHHHHHHHHHHHHCCC------CCSTTTCCTTSSCCCCTTC
T ss_pred hCCCCHHHHHHHHHHHHHHHHHHHHHHhccccccchhHhhhhhhhccccccc
Confidence 999999999999999 888999999999999 888888764
No 208
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=98.90 E-value=2.1e-08 Score=98.43 Aligned_cols=119 Identities=11% Similarity=-0.030 Sum_probs=108.2
Q ss_pred hhHHHHHHhccchhhhhh--hHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccC-HHHHHHHH
Q psy6102 273 EDVIRTIKNSGNEYFKLN--RMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKA-YKRAINLC 349 (426)
Q Consensus 273 lk~a~~~~~~G~~~f~~g--~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~-~~~Ai~~~ 349 (426)
++....|..++..+...+ +|++++.++.++++. +|.+..+|..++.+...++. ++++++++
T Consensus 105 PKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~----------------dprNy~AW~~R~~vl~~l~~~~~eel~~~ 168 (331)
T 3dss_A 105 PKSYGTWHHRCWLLSRLPEPNWARELELCARFLEA----------------DERNFHCWDYRRFVAAQAAVAPAEELAFT 168 (331)
T ss_dssp TTCHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHH----------------CTTCHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred CCCHHHHHHHHHHHhccCcccHHHHHHHHHHHHHh----------------CCCCHHHHHHHHHHHHHhCcCHHHHHHHH
Confidence 346778888888888888 499999999999999 99999999999999999999 69999999
Q ss_pred HHHHHhCCCCHHHHHHHHHHHHHc--------------CChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHH
Q psy6102 350 DDILLMEPNNVKALFRRGRAQVSM--------------NNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQM 407 (426)
Q Consensus 350 ~~AL~ldp~~~kal~~lg~a~~~l--------------g~~~~Al~~l~kAl~l~P~n~~a~~~l~~i~~~l 407 (426)
+++|+++|.|..||..++.++..+ +.++++++++.+++.++|+|..++..+..+....
T Consensus 169 ~~~I~~~p~N~SAW~~R~~ll~~l~~~~~~~~~~~~~~~~~~eEle~~~~ai~~~P~d~SaW~Y~r~ll~~~ 240 (331)
T 3dss_A 169 DSLITRNFSNYSSWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQSAWFYHRWLLGAG 240 (331)
T ss_dssp HHHHHHCSCCHHHHHHHHHHHHHHSCCC------CCCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHSS
T ss_pred HHHHHHCCCCHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhc
Confidence 999999999999999999999888 5689999999999999999999998777666544
No 209
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=98.89 E-value=2.3e-08 Score=98.72 Aligned_cols=114 Identities=7% Similarity=-0.022 Sum_probs=104.1
Q ss_pred ccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHcc-CHHHHHHHHHHHHHhCCCCH
Q psy6102 282 SGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFK-AYKRAINLCDDILLMEPNNV 360 (426)
Q Consensus 282 ~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg-~~~~Ai~~~~~AL~ldp~~~ 360 (426)
........+..++|+.++.++|.+ +|.+..+|+.|+.++..++ .+++++..++.+|..+|++.
T Consensus 60 ~r~~~~~~e~se~AL~lt~~~L~~----------------nP~~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPKny 123 (349)
T 3q7a_A 60 FRAIAAKEEKSERALELTEIIVRM----------------NPAHYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLKSY 123 (349)
T ss_dssp HHHHHHTTCCSHHHHHHHHHHHHH----------------CTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCCH
T ss_pred HHHHHHhCCCCHHHHHHHHHHHHh----------------CchhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcH
Confidence 333444445567899999999999 9999999999999999999 59999999999999999999
Q ss_pred HHHHHHHHHHHHc-C-ChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhhHH
Q psy6102 361 KALFRRGRAQVSM-N-NFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHL 411 (426)
Q Consensus 361 kal~~lg~a~~~l-g-~~~~Al~~l~kAl~l~P~n~~a~~~l~~i~~~l~~~~ 411 (426)
.+|+.|+.++..+ + +++++++++.++++++|.|..++...+.+...++...
T Consensus 124 ~aW~hR~wlL~~l~~~~~~~EL~~~~k~L~~dpkNy~AW~~R~wvl~~l~~~~ 176 (349)
T 3q7a_A 124 QVWHHRLLLLDRISPQDPVSEIEYIHGSLLPDPKNYHTWAYLHWLYSHFSTLG 176 (349)
T ss_dssp HHHHHHHHHHHHHCCSCCHHHHHHHHHHTSSCTTCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcccc
Confidence 9999999999998 8 9999999999999999999999999999999888765
No 210
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=98.88 E-value=6.4e-09 Score=85.18 Aligned_cols=85 Identities=13% Similarity=0.123 Sum_probs=75.5
Q ss_pred hHHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHH
Q psy6102 274 DVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDIL 353 (426)
Q Consensus 274 k~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL 353 (426)
..+..+..+|..++..|+|++|+..|.+++++ .|.+..+++++|.++.++|++++|+..+++++
T Consensus 25 ~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~----------------~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al 88 (117)
T 3k9i_A 25 DLAECYLGLGSTFRTLGEYRKAEAVLANGVKQ----------------FPNHQALRVFYAMVLYNLGRYEQGVELLLKII 88 (117)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----------------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh----------------CCCchHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 46788999999999999999999999999999 99999999999999999999999999999999
Q ss_pred HhCCCCHHHHHHHHHHHHHcC
Q psy6102 354 LMEPNNVKALFRRGRAQVSMN 374 (426)
Q Consensus 354 ~ldp~~~kal~~lg~a~~~lg 374 (426)
.+.|+++.+......+....+
T Consensus 89 ~~~p~~~~~~~~~~ai~~~~~ 109 (117)
T 3k9i_A 89 AETSDDETIQSYKQAILFYAD 109 (117)
T ss_dssp HHHCCCHHHHHTHHHHHHHTT
T ss_pred HhCCCcHHHHHHHHHHHHHHH
Confidence 999999887654444433333
No 211
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=98.88 E-value=9.5e-09 Score=101.43 Aligned_cols=119 Identities=10% Similarity=-0.027 Sum_probs=111.7
Q ss_pred HHHHHHhccchhhhhh-hHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHc-c-CHHHHHHHHHH
Q psy6102 275 VIRTIKNSGNEYFKLN-RMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKF-K-AYKRAINLCDD 351 (426)
Q Consensus 275 ~a~~~~~~G~~~f~~g-~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~l-g-~~~~Ai~~~~~ 351 (426)
....|..++..+...+ .+++++..+.++|.. +|.+..+|..|+.++.++ + +++++++.+++
T Consensus 87 ~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~----------------nPKny~aW~hR~wlL~~l~~~~~~~EL~~~~k 150 (349)
T 3q7a_A 87 HYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQ----------------NLKSYQVWHHRLLLLDRISPQDPVSEIEYIHG 150 (349)
T ss_dssp CHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHT----------------TCCCHHHHHHHHHHHHHHCCSCCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHh----------------CCCcHHHHHHHHHHHHHhcCCChHHHHHHHHH
Confidence 4567888888888888 599999999999998 999999999999999998 8 99999999999
Q ss_pred HHHhCCCCHHHHHHHHHHHHHcCChH--------HHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhh
Q psy6102 352 ILLMEPNNVKALFRRGRAQVSMNNFE--------QGLQDYEQALDLLPNDQQILKEIAFVRKQMRH 409 (426)
Q Consensus 352 AL~ldp~~~kal~~lg~a~~~lg~~~--------~Al~~l~kAl~l~P~n~~a~~~l~~i~~~l~~ 409 (426)
+|+++|.|..+|+.|+.++..++.++ +++++++++++++|.|..++.....+...+++
T Consensus 151 ~L~~dpkNy~AW~~R~wvl~~l~~~~~~~~~~~~eELe~~~k~I~~dp~N~SAW~~R~~lL~~l~~ 216 (349)
T 3q7a_A 151 SLLPDPKNYHTWAYLHWLYSHFSTLGRISEAQWGSELDWCNEMLRVDGRNNSAWGWRWYLRVSRPG 216 (349)
T ss_dssp HTSSCTTCHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHTTSTT
T ss_pred HHHhCCCCHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccc
Confidence 99999999999999999999999998 99999999999999999999999999888765
No 212
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.85 E-value=2.4e-08 Score=80.83 Aligned_cols=85 Identities=14% Similarity=0.119 Sum_probs=75.7
Q ss_pred chHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC-------CCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHH
Q psy6102 324 YYTAALLNMAAVQLKFKAYKRAINLCDDILLME-------PNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQI 396 (426)
Q Consensus 324 ~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ld-------p~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a 396 (426)
..+.-++.+|..+++.++|..|+.++++|++.. +....++..+|.|+..+|+++.|+..+++|++++|++..+
T Consensus 3 Lsa~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~~~ 82 (104)
T 2v5f_A 3 LTAEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRA 82 (104)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred CCHHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHH
Confidence 356778999999999999999999999999863 3568899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHh
Q psy6102 397 LKEIAFVRKQMR 408 (426)
Q Consensus 397 ~~~l~~i~~~l~ 408 (426)
..++..+...+.
T Consensus 83 ~~n~~~~~~~~~ 94 (104)
T 2v5f_A 83 NGNLKYFEYIMA 94 (104)
T ss_dssp HHHHHHHHHHHH
T ss_pred HhhHHHHHHHHH
Confidence 888886655543
No 213
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=98.82 E-value=1.6e-08 Score=100.65 Aligned_cols=92 Identities=15% Similarity=0.250 Sum_probs=87.4
Q ss_pred hHHHHHHHHHHHHHccCHHHHHHHHHHHHH----------------hCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHH
Q psy6102 325 YTAALLNMAAVQLKFKAYKRAINLCDDILL----------------MEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALD 388 (426)
Q Consensus 325 ~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~----------------ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~ 388 (426)
.+..+.++|.++++.|+|++|+..|++||+ ++|.+..+|+++|.+|..+|++++|+++|++|++
T Consensus 222 ~a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~ 301 (370)
T 1ihg_A 222 ISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEALE 301 (370)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHH
Confidence 366799999999999999999999999999 8888999999999999999999999999999999
Q ss_pred hCCCcHHHHHHHHHHHHHHhhHHHHHHH
Q psy6102 389 LLPNDQQILKEIAFVRKQMRHHLNLEKM 416 (426)
Q Consensus 389 l~P~n~~a~~~l~~i~~~l~~~~~a~k~ 416 (426)
++|++..++..++.++..++++++|...
T Consensus 302 ~~p~~~~a~~~lg~~~~~~g~~~eA~~~ 329 (370)
T 1ihg_A 302 IDPSNTKALYRRAQGWQGLKEYDQALAD 329 (370)
T ss_dssp TCTTCHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred hCchhHHHHHHHHHHHHHccCHHHHHHH
Confidence 9999999999999999999999988753
No 214
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.80 E-value=3.2e-08 Score=78.77 Aligned_cols=75 Identities=16% Similarity=0.127 Sum_probs=69.9
Q ss_pred CcchHHHHHHHHHHHHHccC---HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHH
Q psy6102 322 RSYYTAALLNMAAVQLKFKA---YKRAINLCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQI 396 (426)
Q Consensus 322 ~p~~~~~~~nlA~~~~~lg~---~~~Ai~~~~~AL~ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a 396 (426)
+|.++.++..+|.+++..++ ..+|...+++||++||+++.+++.+|.+++..|+|++|+..|+++++.+|.++..
T Consensus 2 ~p~~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~~~~~ 79 (93)
T 3bee_A 2 NAVTATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSNDPNLDR 79 (93)
T ss_dssp CCCCHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCTTCCH
T ss_pred CCCCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccH
Confidence 68899999999999987766 7999999999999999999999999999999999999999999999999985443
No 215
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=98.80 E-value=1e-08 Score=98.18 Aligned_cols=124 Identities=13% Similarity=-0.026 Sum_probs=87.3
Q ss_pred HHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q psy6102 275 VIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILL 354 (426)
Q Consensus 275 ~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ 354 (426)
.-......+..+...|+|++|...|..++.. .|.+. +.+.+|.++++.++|++|+..++.++.
T Consensus 101 r~dl~LayA~~L~~~g~y~eA~~~l~~~~~~----------------~p~~~-~~~~~a~l~~~~~r~~dA~~~l~~a~~ 163 (282)
T 4f3v_A 101 PLAITMGFAACEAAQGNYADAMEALEAAPVA----------------GSEHL-VAWMKAVVYGAAERWTDVIDQVKSAGK 163 (282)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHTSSCCT----------------TCHHH-HHHHHHHHHHHTTCHHHHHHHHTTGGG
T ss_pred HhHHHHHHHHHHHHCCCHHHHHHHHHHHHhc----------------CCchH-HHHHHHHHHHHcCCHHHHHHHHHHhhc
Confidence 3455666777788888888888888777665 66666 777777777777777777777776665
Q ss_pred hCCCC--HHHHHHHHHHHHHcCChHHHHHHHHHHHHhC--CC-cHHHHHHHHHHHHHHhhHHHHHH
Q psy6102 355 MEPNN--VKALFRRGRAQVSMNNFEQGLQDYEQALDLL--PN-DQQILKEIAFVRKQMRHHLNLEK 415 (426)
Q Consensus 355 ldp~~--~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~--P~-n~~a~~~l~~i~~~l~~~~~a~k 415 (426)
..+.. ..+++.+|.++..+|++++|+..|++++.-. |. ...++..++.++..+|+.+++..
T Consensus 164 ~~d~~~~~~a~~~LG~al~~LG~~~eAl~~l~~a~~g~~~P~~~~da~~~~glaL~~lGr~deA~~ 229 (282)
T 4f3v_A 164 WPDKFLAGAAGVAHGVAAANLALFTEAERRLTEANDSPAGEACARAIAWYLAMARRSQGNESAAVA 229 (282)
T ss_dssp CSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSTTTTTTHHHHHHHHHHHHHHHTCHHHHHH
T ss_pred cCCcccHHHHHHHHHHHHHHCCCHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHcCCHHHHHH
Confidence 53221 3477777777777777777777777776543 44 55677777777777777776654
No 216
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=98.79 E-value=1.7e-08 Score=96.63 Aligned_cols=109 Identities=12% Similarity=0.012 Sum_probs=94.9
Q ss_pred HHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcch-HHHHHHHHHHHHHccCHHHHHHHHHHHHHhC
Q psy6102 278 TIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYY-TAALLNMAAVQLKFKAYKRAINLCDDILLME 356 (426)
Q Consensus 278 ~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~-~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ld 356 (426)
..+.+|..+++.++|++|+.+|++++..- +|.. ..+++++|.++.++|++++|+.+|++++.-.
T Consensus 137 ~~~~~a~l~~~~~r~~dA~~~l~~a~~~~---------------d~~~~~~a~~~LG~al~~LG~~~eAl~~l~~a~~g~ 201 (282)
T 4f3v_A 137 VAWMKAVVYGAAERWTDVIDQVKSAGKWP---------------DKFLAGAAGVAHGVAAANLALFTEAERRLTEANDSP 201 (282)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHTTGGGCS---------------CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTST
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHhhccC---------------CcccHHHHHHHHHHHHHHCCCHHHHHHHHHHHhcCC
Confidence 77899999999999999999998776540 2222 4589999999999999999999999999655
Q ss_pred --CC-CHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHH
Q psy6102 357 --PN-NVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAF 402 (426)
Q Consensus 357 --p~-~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~~~l~~ 402 (426)
|. .+++++++|.|+..+|+.++|...|++++..+|+ ..+...|..
T Consensus 202 ~~P~~~~da~~~~glaL~~lGr~deA~~~l~~a~a~~P~-~~~~~aL~~ 249 (282)
T 4f3v_A 202 AGEACARAIAWYLAMARRSQGNESAAVALLEWLQTTHPE-PKVAAALKD 249 (282)
T ss_dssp TTTTTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSCC-HHHHHHHHC
T ss_pred CCccccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc-HHHHHHHhC
Confidence 65 7789999999999999999999999999999999 887776643
No 217
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=98.79 E-value=3.4e-08 Score=102.15 Aligned_cols=132 Identities=5% Similarity=-0.021 Sum_probs=102.4
Q ss_pred hHHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchH-HHHHHHHHHHHHccCHHHHHHHHHHH
Q psy6102 274 DVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYT-AALLNMAAVQLKFKAYKRAINLCDDI 352 (426)
Q Consensus 274 k~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~-~~~~nlA~~~~~lg~~~~Ai~~~~~A 352 (426)
+.+..|...|..+.+.|++++|+..|.+++++ .|.+. .+|.+++.++.+.|++++|+..+++|
T Consensus 319 ~~~~l~~~~~~~~~~~g~~~~A~~~~~~al~~----------------~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~A 382 (530)
T 2ooe_A 319 KNMLLYFAYADYEESRMKYEKVHSIYNRLLAI----------------EDIDPTLVYIQYMKFARRAEGIKSGRMIFKKA 382 (530)
T ss_dssp SCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHS----------------SSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHhcCCHHHHHHHHHHHhCc----------------cccCchHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 35677888899999999999999999999987 66664 57888888888888888888888888
Q ss_pred HHhCCCCHHHHHHHHHH-HHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhhHHHHHHHHHHhhh
Q psy6102 353 LLMEPNNVKALFRRGRA-QVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLNLEKMTYARMF 422 (426)
Q Consensus 353 L~ldp~~~kal~~lg~a-~~~lg~~~~Al~~l~kAl~l~P~n~~a~~~l~~i~~~l~~~~~a~k~~~~k~f 422 (426)
++..|.....+...+.+ +..+|++++|+..|+++++..|++..++..+..++...++.+++. ..|++.+
T Consensus 383 l~~~~~~~~~~~~~a~~~~~~~~~~~~A~~~~e~al~~~p~~~~~~~~~~~~~~~~g~~~~Ar-~~~~~al 452 (530)
T 2ooe_A 383 REDARTRHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTR-VLFERVL 452 (530)
T ss_dssp HTCTTCCTHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTTTCHHHHH-HHHHHHH
T ss_pred HhccCCchHHHHHHHHHHHHHcCChhHHHHHHHHHHHHCCCCHHHHHHHHHHHHhCCCHhhHH-HHHHHHH
Confidence 88888777777766655 345788888888888888888888888888887777777666543 3555544
No 218
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=98.78 E-value=4e-08 Score=86.87 Aligned_cols=115 Identities=15% Similarity=0.141 Sum_probs=92.8
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHHH------hCCCC
Q psy6102 286 YFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILL------MEPNN 359 (426)
Q Consensus 286 ~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~------ldp~~ 359 (426)
++..|+|++|...++..... .+....++.++|.++..+|++++|+..+++++. ..+..
T Consensus 2 ~~~~g~~~~A~~~~~~~~~~----------------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 65 (203)
T 3gw4_A 2 AFEAHDYALAERQAQALLAH----------------PATASGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGDHTAE 65 (203)
T ss_dssp -----CHHHHHHHHHHHHTS----------------TTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCHHHH
T ss_pred ccccccHHHHHHHHHHhcCC----------------hHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCCcHHH
Confidence 46788999999855443221 346789999999999999999999999999998 45566
Q ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHHh---CCCc----HHHHHHHHHHHHHHhhHHHHHHH
Q psy6102 360 VKALFRRGRAQVSMNNFEQGLQDYEQALDL---LPND----QQILKEIAFVRKQMRHHLNLEKM 416 (426)
Q Consensus 360 ~kal~~lg~a~~~lg~~~~Al~~l~kAl~l---~P~n----~~a~~~l~~i~~~l~~~~~a~k~ 416 (426)
..+++++|.++..+|++++|+..+++++.+ .+++ ..++..++.++..+++.+++...
T Consensus 66 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~ 129 (203)
T 3gw4_A 66 HRALHQVGMVERMAGNWDAARRCFLEERELLASLPEDPLAASANAYEVATVALHFGDLAGARQE 129 (203)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHhCCHHHHHHH
Confidence 889999999999999999999999999998 4433 46788999999999999888653
No 219
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=98.78 E-value=2.1e-08 Score=87.71 Aligned_cols=72 Identities=14% Similarity=0.257 Sum_probs=68.0
Q ss_pred HHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCh----------HHHHHHHHHHHHhCCCcHHHHHHHHHHHHH
Q psy6102 337 LKFKAYKRAINLCDDILLMEPNNVKALFRRGRAQVSMNNF----------EQGLQDYEQALDLLPNDQQILKEIAFVRKQ 406 (426)
Q Consensus 337 ~~lg~~~~Ai~~~~~AL~ldp~~~kal~~lg~a~~~lg~~----------~~Al~~l~kAl~l~P~n~~a~~~l~~i~~~ 406 (426)
.+++.|++|++.++++++++|+++++|+++|.++..++++ ++|+..|++|++++|++..++..++.++..
T Consensus 13 ~r~~~feeA~~~~~~Ai~l~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~A~~~LG~ay~~ 92 (158)
T 1zu2_A 13 DRILLFEQIRQDAENTYKSNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAYTS 92 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCcHHHHHHHHHHHHH
Confidence 4678899999999999999999999999999999999875 599999999999999999999999999998
Q ss_pred Hh
Q psy6102 407 MR 408 (426)
Q Consensus 407 l~ 408 (426)
++
T Consensus 93 lg 94 (158)
T 1zu2_A 93 FA 94 (158)
T ss_dssp HH
T ss_pred hc
Confidence 85
No 220
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=98.76 E-value=1.8e-08 Score=80.51 Aligned_cols=83 Identities=13% Similarity=0.098 Sum_probs=71.5
Q ss_pred hHHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHH
Q psy6102 274 DVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDIL 353 (426)
Q Consensus 274 k~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL 353 (426)
..+..++.+|..++..|+|++|+..|++++++ +|.+..+|+++|.++.++|++++|+..+++++
T Consensus 5 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~----------------~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al 68 (100)
T 3ma5_A 5 EDPFTRYALAQEHLKHDNASRALALFEELVET----------------DPDYVGTYYHLGKLYERLDRTDDAIDTYAQGI 68 (100)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----------------STTCTHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh----------------CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 35678999999999999999999999999999 99999999999999999999999999999999
Q ss_pred HhCCC--CHHHHHHHHHHHHH
Q psy6102 354 LMEPN--NVKALFRRGRAQVS 372 (426)
Q Consensus 354 ~ldp~--~~kal~~lg~a~~~ 372 (426)
++.|. +..+...+..++..
T Consensus 69 ~l~~~~~~~~~~~~l~~~l~~ 89 (100)
T 3ma5_A 69 EVAREEGTQKDLSELQDAKLK 89 (100)
T ss_dssp HHHHHHSCHHHHHHHHHHHHH
T ss_pred hhhhcCCchhHHHHHHHHHHH
Confidence 98763 34444444444443
No 221
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.76 E-value=9.6e-08 Score=93.40 Aligned_cols=131 Identities=8% Similarity=0.022 Sum_probs=99.9
Q ss_pred HHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q psy6102 275 VIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILL 354 (426)
Q Consensus 275 ~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ 354 (426)
.+..+..+|..++..|++++|+..|.+++.+.+.... ......++.++|.++...|++++|+..++++++
T Consensus 52 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~----------~~~~~~~~~~la~~~~~~G~~~~A~~~~~~al~ 121 (373)
T 1hz4_A 52 RIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDV----------WHYALWSLIQQSEILFAQGFLQTAWETQEKAFQ 121 (373)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcCc----------HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 4456778888888899999999999999887543221 112345678888888889999999998888887
Q ss_pred hC--------CCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCc-----HHHHHHHHHHHHHHhhHHHHHH
Q psy6102 355 ME--------PNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPND-----QQILKEIAFVRKQMRHHLNLEK 415 (426)
Q Consensus 355 ld--------p~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n-----~~a~~~l~~i~~~l~~~~~a~k 415 (426)
+. |....++..+|.++..+|++++|...+++++.+.|.. ..++..++.++...++.+++..
T Consensus 122 ~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~ 195 (373)
T 1hz4_A 122 LINEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQQQLQCLAMLIQCSLARGDLDNARS 195 (373)
T ss_dssp HHHHTTCTTSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTSCGGGGHHHHHHHHHHHHHHTCHHHHHH
T ss_pred HHHHhccccCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 75 3346677888888888899999999998888887652 3567778888888888877654
No 222
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=98.74 E-value=8.3e-08 Score=91.63 Aligned_cols=97 Identities=13% Similarity=0.130 Sum_probs=86.5
Q ss_pred CcchHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHH-------------------
Q psy6102 322 RSYYTAALLNMAAVQLKFKAYKRAINLCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQD------------------- 382 (426)
Q Consensus 322 ~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ldp~~~kal~~lg~a~~~lg~~~~Al~~------------------- 382 (426)
.|.....+..+|..+++.|++++|+..|+++++++|+++.+++.+|.++..+|++++|+..
T Consensus 113 lp~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~~~~~ 192 (287)
T 3qou_A 113 LPREEELXAQQAMQLMQESNYTDALPLLXDAWQLSNQNGEIGLLLAETLIALNRSEDAEAVLXTIPLQDQDTRYQGLVAQ 192 (287)
T ss_dssp SCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHTTCHHHHHHHHTTSCGGGCSHHHHHHHHH
T ss_pred cCCchhhHHHHHHHHHhCCCHHHHHHHHHHHHHhCCcchhHHHHHHHHHHHCCCHHHHHHHHHhCchhhcchHHHHHHHH
Confidence 4778899999999999999999999999999999999999999999999999999887644
Q ss_pred ---------------HHHHHHhCCCcHHHHHHHHHHHHHHhhHHHHHHHHH
Q psy6102 383 ---------------YEQALDLLPNDQQILKEIAFVRKQMRHHLNLEKMTY 418 (426)
Q Consensus 383 ---------------l~kAl~l~P~n~~a~~~l~~i~~~l~~~~~a~k~~~ 418 (426)
|++++.++|++..++..++.++...++.+++....-
T Consensus 193 ~~l~~~~~~~~a~~~l~~al~~~P~~~~~~~~la~~l~~~g~~~~A~~~l~ 243 (287)
T 3qou_A 193 IELLXQAADTPEIQQLQQQVAENPEDAALATQLALQLHQVGRNEEALELLF 243 (287)
T ss_dssp HHHHHHHTSCHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHhhcccCccHHHHHHHHhcCCccHHHHHHHHHHHHHcccHHHHHHHHH
Confidence 555577889999999999999999999988876433
No 223
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.71 E-value=9.1e-08 Score=77.34 Aligned_cols=85 Identities=11% Similarity=0.021 Sum_probs=74.1
Q ss_pred HHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q psy6102 275 VIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILL 354 (426)
Q Consensus 275 ~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ 354 (426)
.+..++.+|..+|+.++|..|+..|.+|++..+... ........++.++|.|+.++|+++.|+..++++++
T Consensus 4 sa~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~---------~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~ 74 (104)
T 2v5f_A 4 TAEDCFELGKVAYTEADYYHTELWMEQALRQLDEGE---------ISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLE 74 (104)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTC---------CCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccC---------CCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHh
Confidence 356789999999999999999999999999853221 11356789999999999999999999999999999
Q ss_pred hCCCCHHHHHHHHH
Q psy6102 355 MEPNNVKALFRRGR 368 (426)
Q Consensus 355 ldp~~~kal~~lg~ 368 (426)
++|++..++.+++.
T Consensus 75 l~P~~~~~~~n~~~ 88 (104)
T 2v5f_A 75 LDPEHQRANGNLKY 88 (104)
T ss_dssp HCTTCHHHHHHHHH
T ss_pred cCCCCHHHHhhHHH
Confidence 99999999888873
No 224
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=98.69 E-value=1.2e-07 Score=96.50 Aligned_cols=120 Identities=10% Similarity=0.084 Sum_probs=94.9
Q ss_pred HHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Q psy6102 276 IRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLM 355 (426)
Q Consensus 276 a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~l 355 (426)
+....+.+......|+|++|+..|.++|++....- -...|.-+..+.++|.+|..+|+|++|+..++++|++
T Consensus 298 ~~~~le~~~~~~~~g~~~eA~~~~~~~L~i~~~~l--------g~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i 369 (433)
T 3qww_A 298 ARNVIEEFRRAKHYKSPSELLEICELSQEKMSSVF--------EDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKP 369 (433)
T ss_dssp HHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHTTTB--------CTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhccCHHHHHHHHHHHHHHhhCcc--------ChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHH
Confidence 33444455555567899999999999999743211 1225667789999999999999999999999999976
Q ss_pred -----CCCC---HHHHHHHHHHHHHcCChHHHHHHHHHHHHh-----CCCcHHHHHHHHHH
Q psy6102 356 -----EPNN---VKALFRRGRAQVSMNNFEQGLQDYEQALDL-----LPNDQQILKEIAFV 403 (426)
Q Consensus 356 -----dp~~---~kal~~lg~a~~~lg~~~~Al~~l~kAl~l-----~P~n~~a~~~l~~i 403 (426)
-|++ ...++++|.+|..+|++++|+..|++|+++ -|+++.+......+
T Consensus 370 ~~~~lG~~Hp~~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~l~~~l 430 (433)
T 3qww_A 370 YSKHYPVYSLNVASMWLKLGRLYMGLENKAAGEKALKKAIAIMEVAHGKDHPYISEIKQEI 430 (433)
T ss_dssp HHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHH
T ss_pred HHHHcCCCChHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHH
Confidence 3444 667999999999999999999999999985 58888776654443
No 225
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=98.65 E-value=2.4e-07 Score=75.09 Aligned_cols=72 Identities=15% Similarity=0.182 Sum_probs=69.2
Q ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhhHHHHHH
Q psy6102 344 RAINLCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLNLEK 415 (426)
Q Consensus 344 ~Ai~~~~~AL~ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~~~l~~i~~~l~~~~~a~k 415 (426)
+|+..|+++++++|+++.+++.+|.++..+|++++|+..|+++++++|++..++..++.++..+++.+++..
T Consensus 3 ~a~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~ 74 (115)
T 2kat_A 3 AITERLEAMLAQGTDNMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQGDRAGARQ 74 (115)
T ss_dssp CHHHHHHHHHTTTCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHH
T ss_pred HHHHHHHHHHHhCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcCCHHHHHH
Confidence 588999999999999999999999999999999999999999999999999999999999999999988765
No 226
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=98.63 E-value=1.3e-07 Score=97.81 Aligned_cols=129 Identities=9% Similarity=0.061 Sum_probs=107.1
Q ss_pred HHHHHHhccchhhh-------hhhHH-------HHHHHHHHHHH-HHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHc
Q psy6102 275 VIRTIKNSGNEYFK-------LNRMH-------DAQRKYKKAVR-YIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKF 339 (426)
Q Consensus 275 ~a~~~~~~G~~~f~-------~g~y~-------~Ai~~y~kAl~-~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~l 339 (426)
.+..|...|..+.+ .|+++ +|+..|.+|++ + .|.+..+|..+|.++.++
T Consensus 271 ~~~~w~~~~~~~~~~~~~~~~~g~~~~a~~~~~~A~~~~~~Al~~~----------------~p~~~~l~~~~~~~~~~~ 334 (530)
T 2ooe_A 271 HPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTL----------------LKKNMLLYFAYADYEESR 334 (530)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTTTT----------------CSSCHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHhchhhhhccchhhhhhhhHHHHHHHHHHHHHh----------------CcccHHHHHHHHHHHHhc
Confidence 46778888888876 68877 89999999997 6 799999999999999999
Q ss_pred cCHHHHHHHHHHHHHhCCCCH-HHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHH-HHHhhHHHHHHHH
Q psy6102 340 KAYKRAINLCDDILLMEPNNV-KALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVR-KQMRHHLNLEKMT 417 (426)
Q Consensus 340 g~~~~Ai~~~~~AL~ldp~~~-kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~~~l~~i~-~~l~~~~~a~k~~ 417 (426)
|++++|+..|+++++++|.++ .+|..+|.++..+|++++|++.|++|++..|.+..+......+. ...++.+++. ..
T Consensus 335 g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~~~~~~~~~a~~~~~~~~~~~~A~-~~ 413 (530)
T 2ooe_A 335 MKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALMEYYCSKDKSVAF-KI 413 (530)
T ss_dssp TCHHHHHHHHHHHHHSSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTCCTHHHHHHHHHHHHHTCCHHHHH-HH
T ss_pred CCHHHHHHHHHHHhCccccCchHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHcCChhHHH-HH
Confidence 999999999999999999985 69999999999999999999999999999998766665544443 2345554443 34
Q ss_pred HHh
Q psy6102 418 YAR 420 (426)
Q Consensus 418 ~~k 420 (426)
|.+
T Consensus 414 ~e~ 416 (530)
T 2ooe_A 414 FEL 416 (530)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 227
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=98.62 E-value=1e-07 Score=96.99 Aligned_cols=117 Identities=10% Similarity=0.045 Sum_probs=93.3
Q ss_pred HHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Q psy6102 276 IRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLM 355 (426)
Q Consensus 276 a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~l 355 (426)
+.........+..+|+|++|+..|+++++..... .....|....++.++|.+|..+|+|++|+..++++|++
T Consensus 287 ~~~ll~~ie~~~~~g~~~~a~~~~~~~L~~~~~~--------lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i 358 (429)
T 3qwp_A 287 VQESLKKIEELKAHWKWEQVLAMCQAIISSNSER--------LPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEP 358 (429)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTCSSCC--------CCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhccHHHHHHHHHHHHHhccCc--------CCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHh
Confidence 4445555566778899999999999999862111 11125677889999999999999999999999999976
Q ss_pred -----CCCC---HHHHHHHHHHHHHcCChHHHHHHHHHHHHh-----CCCcHHHHHHH
Q psy6102 356 -----EPNN---VKALFRRGRAQVSMNNFEQGLQDYEQALDL-----LPNDQQILKEI 400 (426)
Q Consensus 356 -----dp~~---~kal~~lg~a~~~lg~~~~Al~~l~kAl~l-----~P~n~~a~~~l 400 (426)
-|++ ...++++|.+|..+|++++|+..|++|+++ -|+++.+...+
T Consensus 359 ~~~~lg~~Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~ 416 (429)
T 3qwp_A 359 YRIFFPGSHPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIMRVTHGREHSLIEDLI 416 (429)
T ss_dssp HHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHH
T ss_pred HHHHcCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHH
Confidence 3444 667999999999999999999999999985 57777665543
No 228
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.62 E-value=3.7e-07 Score=77.56 Aligned_cols=98 Identities=12% Similarity=0.043 Sum_probs=85.7
Q ss_pred ccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHH----ccCHHHHHHHHHHHHHhCC
Q psy6102 282 SGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLK----FKAYKRAINLCDDILLMEP 357 (426)
Q Consensus 282 ~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~----lg~~~~Ai~~~~~AL~ldp 357 (426)
+|..|...+.+++|+.+|++|.+. .++.+++++|.+|.. .+++++|+.++++|.+.
T Consensus 31 lg~~y~~g~~~~~A~~~~~~Aa~~------------------g~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~-- 90 (138)
T 1klx_A 31 LSLVSNSQINKQKLFQYLSKACEL------------------NSGNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGL-- 90 (138)
T ss_dssp HHHHTCTTSCHHHHHHHHHHHHHT------------------TCHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT--
T ss_pred HHHHHHcCCCHHHHHHHHHHHHcC------------------CCHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHcC--
Confidence 888888888889999999999875 467899999999999 89999999999999987
Q ss_pred CCHHHHHHHHHHHHH----cCChHHHHHHHHHHHHhCCCcHHHHHHHH
Q psy6102 358 NNVKALFRRGRAQVS----MNNFEQGLQDYEQALDLLPNDQQILKEIA 401 (426)
Q Consensus 358 ~~~kal~~lg~a~~~----lg~~~~Al~~l~kAl~l~P~n~~a~~~l~ 401 (426)
.++.+++++|.+|.. .+++++|+..|++|.++ .++.+...++
T Consensus 91 g~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~--g~~~A~~~l~ 136 (138)
T 1klx_A 91 NDQDGCLILGYKQYAGKGVVKNEKQAVKTFEKACRL--GSEDACGILN 136 (138)
T ss_dssp TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHHHHC-
T ss_pred CCHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHHC--CCHHHHHHHh
Confidence 789999999999999 99999999999999988 5566655544
No 229
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=98.56 E-value=6.4e-07 Score=74.99 Aligned_cols=104 Identities=13% Similarity=0.193 Sum_probs=90.2
Q ss_pred hhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHH---HHHHHHHHHHhC-C-CCHHHHH
Q psy6102 290 NRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKR---AINLCDDILLME-P-NNVKALF 364 (426)
Q Consensus 290 g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~---Ai~~~~~AL~ld-p-~~~kal~ 364 (426)
.....+...|.+++.. .+....+.+++|+++.+...... +|..+...++-+ | ..-+.+|
T Consensus 15 ~~l~~~~~~y~~e~~~----------------~~~s~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY 78 (126)
T 1nzn_A 15 EDLLKFEKKFQSEKAA----------------GSVSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVF 78 (126)
T ss_dssp HHHHHHHHHHHHHHHH----------------SCCCHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcc----------------CCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHH
Confidence 3455666677777665 67889999999999999988777 999999999887 5 6789999
Q ss_pred HHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhh
Q psy6102 365 RRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRH 409 (426)
Q Consensus 365 ~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~~~l~~i~~~l~~ 409 (426)
.+|..++.+|+|++|+.+++.+|+++|+|.++......+...+.+
T Consensus 79 ~LAvg~yklg~Y~~A~~~~~~lL~~eP~n~QA~~Lk~~i~~~i~k 123 (126)
T 1nzn_A 79 YLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELERLIDKAMKK 123 (126)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999888876543
No 230
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.54 E-value=3.7e-07 Score=89.22 Aligned_cols=131 Identities=12% Similarity=0.005 Sum_probs=107.5
Q ss_pred HHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q psy6102 275 VIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILL 354 (426)
Q Consensus 275 ~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ 354 (426)
.+..+...|..++..|++++|+..+.+++...+... ......++.++|.++...|++++|+..+.+++.
T Consensus 13 ~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~~~~~-----------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~ 81 (373)
T 1hz4_A 13 HAEFNALRAQVAINDGNPDEAERLAKLALEELPPGW-----------FYSRIVATSVLGEVLHCKGELTRSLALMQQTEQ 81 (373)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTC-----------HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHcCCCCc-----------hhHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHH
Confidence 456677889999999999999999999998732100 012345789999999999999999999999998
Q ss_pred hCCCC------HHHHHHHHHHHHHcCChHHHHHHHHHHHHhC--------CCcHHHHHHHHHHHHHHhhHHHHHHH
Q psy6102 355 MEPNN------VKALFRRGRAQVSMNNFEQGLQDYEQALDLL--------PNDQQILKEIAFVRKQMRHHLNLEKM 416 (426)
Q Consensus 355 ldp~~------~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~--------P~n~~a~~~l~~i~~~l~~~~~a~k~ 416 (426)
+.|.. ..+++.+|.++..+|++++|+..|++++.+. |....+...++.++...++.+++...
T Consensus 82 ~~~~~~~~~~~~~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~ 157 (373)
T 1hz4_A 82 MARQHDVWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEAS 157 (373)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHhcCcHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 86543 3457899999999999999999999999985 34456778899999999999888754
No 231
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.52 E-value=8e-07 Score=90.82 Aligned_cols=81 Identities=14% Similarity=-0.031 Sum_probs=71.6
Q ss_pred chHHHHHHHHHHHHH----ccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH----cCChHHHHHHHHHHHHhCCC---
Q psy6102 324 YYTAALLNMAAVQLK----FKAYKRAINLCDDILLMEPNNVKALFRRGRAQVS----MNNFEQGLQDYEQALDLLPN--- 392 (426)
Q Consensus 324 ~~~~~~~nlA~~~~~----lg~~~~Ai~~~~~AL~ldp~~~kal~~lg~a~~~----lg~~~~Al~~l~kAl~l~P~--- 392 (426)
.++.+++++|.+|.. .+++++|+.++++|++.. ++.+++++|.+|.. .+++++|+..|++|++.+|+
T Consensus 361 ~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~A~~~~--~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~ 438 (490)
T 2xm6_A 361 GEKAAQFNLGNALLQGKGVKKDEQQAAIWMRKAAEQG--LSAAQVQLGEIYYYGLGVERDYVQAWAWFDTASTNDMNLFG 438 (490)
T ss_dssp TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHHHCCHHH
T ss_pred CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhCC--CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCCCCCcC
Confidence 568899999999999 899999999999999864 79999999999998 89999999999999999954
Q ss_pred cHHHHHHHHHHHHH
Q psy6102 393 DQQILKEIAFVRKQ 406 (426)
Q Consensus 393 n~~a~~~l~~i~~~ 406 (426)
++.+...++.+...
T Consensus 439 ~~~a~~~l~~~~~~ 452 (490)
T 2xm6_A 439 TENRNITEKKLTAK 452 (490)
T ss_dssp HHHHHHHHTTSCHH
T ss_pred CHHHHHHHHhcCHh
Confidence 88888888777654
No 232
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.50 E-value=1.5e-06 Score=73.73 Aligned_cols=103 Identities=15% Similarity=0.112 Sum_probs=90.6
Q ss_pred hhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q psy6102 289 LNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLMEPNNVKALFRRGR 368 (426)
Q Consensus 289 ~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ldp~~~kal~~lg~ 368 (426)
.+++++|+..|++|.+. .. +.++ +|.+|...+.+++|++++++|.+. .++.+++++|.
T Consensus 8 ~~d~~~A~~~~~~aa~~----------------g~--~~a~--lg~~y~~g~~~~~A~~~~~~Aa~~--g~~~a~~~Lg~ 65 (138)
T 1klx_A 8 KKDLKKAIQYYVKACEL----------------NE--MFGC--LSLVSNSQINKQKLFQYLSKACEL--NSGNGCRFLGD 65 (138)
T ss_dssp HHHHHHHHHHHHHHHHT----------------TC--TTHH--HHHHTCTTSCHHHHHHHHHHHHHT--TCHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHcC----------------CC--Hhhh--HHHHHHcCCCHHHHHHHHHHHHcC--CCHHHHHHHHH
Confidence 57899999999999987 32 2333 999999999999999999999987 78999999999
Q ss_pred HHHH----cCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH----HhhHHHHHH
Q psy6102 369 AQVS----MNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQ----MRHHLNLEK 415 (426)
Q Consensus 369 a~~~----lg~~~~Al~~l~kAl~l~P~n~~a~~~l~~i~~~----l~~~~~a~k 415 (426)
+|.. .+++++|+..|++|.+. .++.+...++.++.. .++.+++.+
T Consensus 66 ~y~~G~g~~~d~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~~A~~ 118 (138)
T 1klx_A 66 FYENGKYVKKDLRKAAQYYSKACGL--NDQDGCLILGYKQYAGKGVVKNEKQAVK 118 (138)
T ss_dssp HHHHCSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHHHHH
T ss_pred HHHcCCCCCccHHHHHHHHHHHHcC--CCHHHHHHHHHHHHCCCCCCcCHHHHHH
Confidence 9999 89999999999999987 789999999999988 666666654
No 233
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.50 E-value=2.2e-06 Score=87.60 Aligned_cols=78 Identities=14% Similarity=-0.009 Sum_probs=46.6
Q ss_pred hHHHHHHHHHHHHH----ccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH----cCChHHHHHHHHHHHHhCCCcHHH
Q psy6102 325 YTAALLNMAAVQLK----FKAYKRAINLCDDILLMEPNNVKALFRRGRAQVS----MNNFEQGLQDYEQALDLLPNDQQI 396 (426)
Q Consensus 325 ~~~~~~nlA~~~~~----lg~~~~Ai~~~~~AL~ldp~~~kal~~lg~a~~~----lg~~~~Al~~l~kAl~l~P~n~~a 396 (426)
++.+++++|.+|.. .+++++|+++++++++. .++.+++.+|.+|.. .+++++|+..|+++++. .++.+
T Consensus 146 ~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~--~~~~a 221 (490)
T 2xm6_A 146 RDSGQQSMGDAYFEGDGVTRDYVMAREWYSKAAEQ--GNVWSCNQLGYMYSRGLGVERNDAISAQWYRKSATS--GDELG 221 (490)
T ss_dssp CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHH
T ss_pred CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC--CCHHHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHHC--CCHHH
Confidence 45566666666665 55666666666666554 356666666666665 56666666666666554 34556
Q ss_pred HHHHHHHHHH
Q psy6102 397 LKEIAFVRKQ 406 (426)
Q Consensus 397 ~~~l~~i~~~ 406 (426)
...++.++..
T Consensus 222 ~~~lg~~y~~ 231 (490)
T 2xm6_A 222 QLHLADMYYF 231 (490)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHc
Confidence 6666666554
No 234
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=98.43 E-value=8.3e-07 Score=88.17 Aligned_cols=132 Identities=11% Similarity=0.072 Sum_probs=102.5
Q ss_pred HHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHHHh-
Q psy6102 277 RTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLM- 355 (426)
Q Consensus 277 ~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~l- 355 (426)
.....+|..+...+++++|+..|.+++........ .+....++.++|.++..+|+|.+|+..+++++..
T Consensus 96 ~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~----------~~~~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~ 165 (434)
T 4b4t_Q 96 VLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKR----------VFLKHSLSIKLATLHYQKKQYKDSLALINDLLREF 165 (434)
T ss_dssp HHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSSC----------CSSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCc----------cHHHHHHHHHHHHHHHHccChHHHHHHHHHHHHHH
Confidence 34556777778888888888888888887543322 5667889999999999999999999999999876
Q ss_pred -----CCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCC---CcH----HHHHHHHHHHHHHhhHHHHHHHHH
Q psy6102 356 -----EPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLP---NDQ----QILKEIAFVRKQMRHHLNLEKMTY 418 (426)
Q Consensus 356 -----dp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P---~n~----~a~~~l~~i~~~l~~~~~a~k~~~ 418 (426)
.+...+++..+|.+|..+|++++|...|++++.+.+ ... .+...++.++...+++.++.+...
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~g~~~~~~~~y~~A~~~~~ 240 (434)
T 4b4t_Q 166 KKLDDKPSLVDVHLLESKVYHKLRNLAKSKASLTAARTAANSIYCPTQTVAELDLMSGILHCEDKDYKTAFSYFF 240 (434)
T ss_dssp TTSSCSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHTTSSSCHHHHHHHHH
T ss_pred HhcccchhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 344578999999999999999999999999998743 222 344555666666677777765433
No 235
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=98.42 E-value=1.3e-06 Score=88.95 Aligned_cols=120 Identities=10% Similarity=0.081 Sum_probs=76.1
Q ss_pred HHHhccchhhhhh---hHHHHHHHHHHHHHHHHhhcc-----------c----ch-------hhhhhhcCcchHHHHHHH
Q psy6102 278 TIKNSGNEYFKLN---RMHDAQRKYKKAVRYIKWYNQ-----------S----QS-------KTQQKHFRSYYTAALLNM 332 (426)
Q Consensus 278 ~~~~~G~~~f~~g---~y~~Ai~~y~kAl~~~~~~~~-----------~----~~-------~~~~~~~~p~~~~~~~nl 332 (426)
.++.+|..+...| ++++|+..|.+|++.-+.... . .+ .+.. . |.++.+++++
T Consensus 178 a~~~Lg~~~~~~g~~~~~~~A~~~~~~aa~~g~~~a~~~~~Lg~~y~~g~~~~~d~~~A~~~~~~a--a-~g~~~a~~~L 254 (452)
T 3e4b_A 178 CYVELATVYQKKQQPEQQAELLKQMEAGVSRGTVTAQRVDSVARVLGDATLGTPDEKTAQALLEKI--A-PGYPASWVSL 254 (452)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHH--G-GGSTHHHHHH
T ss_pred HHHHHHHHHHHcCCcccHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHH--c-CCCHHHHHHH
Confidence 6788999999999 999999999999886211111 0 00 0111 1 5566666666
Q ss_pred HHH-H--HHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC-----ChHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q psy6102 333 AAV-Q--LKFKAYKRAINLCDDILLMEPNNVKALFRRGRAQVSMN-----NFEQGLQDYEQALDLLPNDQQILKEIAFVR 404 (426)
Q Consensus 333 A~~-~--~~lg~~~~Ai~~~~~AL~ldp~~~kal~~lg~a~~~lg-----~~~~Al~~l~kAl~l~P~n~~a~~~l~~i~ 404 (426)
|.+ + ...+++++|+.+|+++++.. ++.+++++|.+|. .| ++++|+..|++|. |.++.+...++.++
T Consensus 255 g~~~~~~~~~~d~~~A~~~~~~Aa~~g--~~~A~~~Lg~~y~-~G~g~~~d~~~A~~~~~~Aa---~g~~~A~~~Lg~~y 328 (452)
T 3e4b_A 255 AQLLYDFPELGDVEQMMKYLDNGRAAD--QPRAELLLGKLYY-EGKWVPADAKAAEAHFEKAV---GREVAADYYLGQIY 328 (452)
T ss_dssp HHHHHHSGGGCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHH-HCSSSCCCHHHHHHHHHTTT---TTCHHHHHHHHHHH
T ss_pred HHHHHhCCCCCCHHHHHHHHHHHHHCC--CHHHHHHHHHHHH-cCCCCCCCHHHHHHHHHHHh---CCCHHHHHHHHHHH
Confidence 666 3 34566666666666666443 6666666666665 33 6666666666666 66666666666665
Q ss_pred HH
Q psy6102 405 KQ 406 (426)
Q Consensus 405 ~~ 406 (426)
..
T Consensus 329 ~~ 330 (452)
T 3e4b_A 329 RR 330 (452)
T ss_dssp HT
T ss_pred HC
Confidence 54
No 236
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=98.34 E-value=4.7e-06 Score=82.42 Aligned_cols=119 Identities=10% Similarity=0.019 Sum_probs=79.4
Q ss_pred HHHHHHhccchhhh---hhhHHHHHHHHHHHHHHHHhhcccch----------------------------hhhhhhcCc
Q psy6102 275 VIRTIKNSGNEYFK---LNRMHDAQRKYKKAVRYIKWYNQSQS----------------------------KTQQKHFRS 323 (426)
Q Consensus 275 ~a~~~~~~G~~~f~---~g~y~~Ai~~y~kAl~~~~~~~~~~~----------------------------~~~~~~~~p 323 (426)
.+..++-+|..++. ..++.+|+.+|++|+++-|.+..... ........|
T Consensus 195 ~Aydl~Lra~~~l~~~~~~~~~~A~~l~e~Al~lDP~~a~A~A~la~a~~~~~~~~~~~~~~~~~l~~a~~a~~a~~~~~ 274 (372)
T 3ly7_A 195 ALLTNFYQAHDYLLHGDDKSLNRASELLGEIVQSSPEFTYARAEKALVDIVRHSQHPLDEKQLAALNTEIDNIVTLPELN 274 (372)
T ss_dssp GGHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHTCGGGT
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhccCCCchhhHHHHHHHHHHHHhcccCC
Confidence 34555666666654 45679999999999998443222100 001224456
Q ss_pred chHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcH
Q psy6102 324 YYTAALLNMAAVQLKFKAYKRAINLCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQ 394 (426)
Q Consensus 324 ~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~ 394 (426)
..+.++.-+|.+++..|++++|+..+++|+.++|+ ..+|..+|.++...|++++|++.|++|+.++|..+
T Consensus 275 ~~a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln~s-~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~~ 344 (372)
T 3ly7_A 275 NLSIIYQIKAVSALVKGKTDESYQAINTGIDLEMS-WLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGAN 344 (372)
T ss_dssp TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSHH
T ss_pred cCHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCCC-HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcC
Confidence 66667777777777677777777777777777753 56677777777777777777777777777777665
No 237
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=98.30 E-value=2.2e-06 Score=85.04 Aligned_cols=132 Identities=8% Similarity=0.088 Sum_probs=108.5
Q ss_pred hHHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHH
Q psy6102 274 DVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDIL 353 (426)
Q Consensus 274 k~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL 353 (426)
.....+..+|..|+..|+|++|+.+|.+++...+.... ......++.+++.++...+++++|+..+++++
T Consensus 53 ~~~~al~~l~~~y~~~~~~~~a~~~~~~~~~~~~~~~~----------~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~ 122 (434)
T 4b4t_Q 53 EQETSILELGQLYVTMGAKDKLREFIPHSTEYMMQFAK----------SKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSI 122 (434)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHTHHHHHTSCH----------HHHHHHHHHHHHHHCSCCSCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccc----------hHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 34567889999999999999999999999998544321 11234567788899989999999999999999
Q ss_pred HhCC------CCHHHHHHHHHHHHHcCChHHHHHHHHHHHHh------CCCcHHHHHHHHHHHHHHhhHHHHHH
Q psy6102 354 LMEP------NNVKALFRRGRAQVSMNNFEQGLQDYEQALDL------LPNDQQILKEIAFVRKQMRHHLNLEK 415 (426)
Q Consensus 354 ~ldp------~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l------~P~n~~a~~~l~~i~~~l~~~~~a~k 415 (426)
.+.+ ....++.++|.++..+|+|++|+..+++++.. .|....+...+..++..++++.++..
T Consensus 123 ~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~ 196 (434)
T 4b4t_Q 123 EFAKREKRVFLKHSLSIKLATLHYQKKQYKDSLALINDLLREFKKLDDKPSLVDVHLLESKVYHKLRNLAKSKA 196 (434)
T ss_dssp HHHHHSSCCSSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHhCccHHHHHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhCcHHHHHH
Confidence 7643 34789999999999999999999999999886 23346788899999999999887764
No 238
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=98.23 E-value=1.1e-05 Score=78.17 Aligned_cols=124 Identities=12% Similarity=0.077 Sum_probs=101.4
Q ss_pred HHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCc--chHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q psy6102 277 RTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRS--YYTAALLNMAAVQLKFKAYKRAINLCDDILL 354 (426)
Q Consensus 277 ~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p--~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ 354 (426)
..+...|..+...|++++|++.+.++|.. .| .+..++..++.+++++|+.+.|.+.+++..+
T Consensus 101 ~~~~~la~i~~~~g~~eeAL~~l~~~i~~----------------~~~~~~lea~~l~vqi~L~~~r~d~A~k~l~~~~~ 164 (310)
T 3mv2_B 101 YELYLLATAQAILGDLDKSLETCVEGIDN----------------DEAEGTTELLLLAIEVALLNNNVSTASTIFDNYTN 164 (310)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHTS----------------SCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHhcc----------------CCCcCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHh
Confidence 34568899999999999999999999876 55 8999999999999999999999999999999
Q ss_pred hCCC----CHHHHHHH--HHHHHHcC--ChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhhHHHHHHHH
Q psy6102 355 MEPN----NVKALFRR--GRAQVSMN--NFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLNLEKMT 417 (426)
Q Consensus 355 ldp~----~~kal~~l--g~a~~~lg--~~~~Al~~l~kAl~l~P~n~~a~~~l~~i~~~l~~~~~a~k~~ 417 (426)
.+|+ +-..+..+ |.+.+..| ++.+|...|+++....|+.......+. ++..+++.+++++.+
T Consensus 165 ~~~d~~~~~d~~l~~Laea~v~l~~g~~~~q~A~~~f~El~~~~p~~~~~~lLln-~~~~~g~~~eAe~~L 234 (310)
T 3mv2_B 165 AIEDTVSGDNEMILNLAESYIKFATNKETATSNFYYYEELSQTFPTWKTQLGLLN-LHLQQRNIAEAQGIV 234 (310)
T ss_dssp HSCHHHHHHHHHHHHHHHHHHHHHHTCSTTTHHHHHHHHHHTTSCSHHHHHHHHH-HHHHHTCHHHHHHHH
T ss_pred cCccccccchHHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhCCCcccHHHHHH-HHHHcCCHHHHHHHH
Confidence 9994 33444444 44466666 999999999999888887333333333 889999999998754
No 239
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=98.23 E-value=8.9e-06 Score=77.62 Aligned_cols=91 Identities=12% Similarity=0.018 Sum_probs=82.8
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcc--hHHHHHHHHHHHHHc-----cCHHHHHHHHHHHHHhCCC
Q psy6102 286 YFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSY--YTAALLNMAAVQLKF-----KAYKRAINLCDDILLMEPN 358 (426)
Q Consensus 286 ~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~--~~~~~~nlA~~~~~l-----g~~~~Ai~~~~~AL~ldp~ 358 (426)
.-..+....|...+++||++ +|. +..+|..+|..|.+. |+.++|.+.+++||+++|+
T Consensus 173 ~~Al~~l~~A~a~lerAleL----------------DP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~ 236 (301)
T 3u64_A 173 SALPDTVHAAVMMLERACDL----------------WPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSA 236 (301)
T ss_dssp SCCHHHHHHHHHHHHHHHHH----------------CTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCT
T ss_pred hHHHHhHHHHHHHHHHHHHh----------------CCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCC
Confidence 44566788999999999999 898 677999999999996 9999999999999999997
Q ss_pred C-HHHHHHHHHHHHH-cCChHHHHHHHHHHHHhCCC
Q psy6102 359 N-VKALFRRGRAQVS-MNNFEQGLQDYEQALDLLPN 392 (426)
Q Consensus 359 ~-~kal~~lg~a~~~-lg~~~~Al~~l~kAl~l~P~ 392 (426)
. ..+++..|..+.. ++++++|.+.+++|+..+|.
T Consensus 237 ~~id~~v~YA~~l~~~~gd~~~a~~~L~kAL~a~p~ 272 (301)
T 3u64_A 237 HDPDHHITYADALCIPLNNRAGFDEALDRALAIDPE 272 (301)
T ss_dssp TCSHHHHHHHHHTTTTTTCHHHHHHHHHHHHHCCGG
T ss_pred CCchHHHHHHHHHHHhcCCHHHHHHHHHHHHcCCCC
Confidence 5 9999999999988 59999999999999998876
No 240
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.23 E-value=2.1e-06 Score=88.61 Aligned_cols=116 Identities=12% Similarity=0.086 Sum_probs=94.6
Q ss_pred hHHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHH
Q psy6102 274 DVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDIL 353 (426)
Q Consensus 274 k~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL 353 (426)
..+..+.++|..|..+|+|++|+.+|.++|++....- -.-.|.-+..+.|+|.+|..+|+|++|+..|++||
T Consensus 349 ~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~l--------G~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al 420 (490)
T 3n71_A 349 YVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLY--------HHNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAY 420 (490)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHS--------CTTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHc--------CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 4778899999999999999999999999999843221 12267788899999999999999999999999999
Q ss_pred Hh-----CCCC---HHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHH
Q psy6102 354 LM-----EPNN---VKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQIL 397 (426)
Q Consensus 354 ~l-----dp~~---~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~ 397 (426)
++ -|++ .+.+-.+++++..++.|.+|...|+++.+-.-+|..++
T Consensus 421 ~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~~~~~ae~~~~~~~~~~~~~~~~~ 472 (490)
T 3n71_A 421 AILLVTHGPSHPITKDLEAMRMQTEMELRMFRQNEFMYHKMREAALNNQPMQ 472 (490)
T ss_dssp HHHHHHTCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC----
T ss_pred HHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 75 4665 55678899999999999999999999976543444333
No 241
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=98.22 E-value=2.3e-05 Score=74.77 Aligned_cols=149 Identities=9% Similarity=-0.004 Sum_probs=108.9
Q ss_pred cchhhhHHHHHHhccchhhhhh--------------hHHHHHHHHHHHHHHHHhhccc---------------chhhhhh
Q psy6102 269 LNQMEDVIRTIKNSGNEYFKLN--------------RMHDAQRKYKKAVRYIKWYNQS---------------QSKTQQK 319 (426)
Q Consensus 269 ~i~ilk~a~~~~~~G~~~f~~g--------------~y~~Ai~~y~kAl~~~~~~~~~---------------~~~~~~~ 319 (426)
.......+..|...++.+.+.. ++..|...|.++.++.-..-.. .-.....
T Consensus 66 ~~Ll~~~a~ly~~Ya~afV~~~a~~~~~~~~~~~~~~~~RA~~Ly~ra~~y~~raL~~~~~~~~~~~~~~~~~~~~~~l~ 145 (301)
T 3u64_A 66 RGLSLAVGRLYIMYANAFVQTPAQYLPEDEFEAQNEAYSRARKLYLRGARYALSSLETAYPGFTREVFSGDEQRLHKVLS 145 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHTHHHHHTSCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTHHHHHTSSCHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHhcCchhhcchhhHhhhhhhHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHhcchhhHHHHHH
Confidence 3334445555666666555542 5667777777777653211111 0124455
Q ss_pred hcCcchHHHHHHHHHHHHH-----------ccCHHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHHc-----CChHHHHH
Q psy6102 320 HFRSYYTAALLNMAAVQLK-----------FKAYKRAINLCDDILLMEPN--NVKALFRRGRAQVSM-----NNFEQGLQ 381 (426)
Q Consensus 320 ~~~p~~~~~~~nlA~~~~~-----------lg~~~~Ai~~~~~AL~ldp~--~~kal~~lg~a~~~l-----g~~~~Al~ 381 (426)
..+|.++.+++..|..+.. ++...+|...+++||++||+ +..+|..+|..|..+ |+.++|.+
T Consensus 146 ~~~~~dve~L~W~ai~~ss~a~~~~gg~~Al~~l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~ 225 (301)
T 3u64_A 146 RCTRVDVGTLYWVGTGYVAAFALTPLGSALPDTVHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHT 225 (301)
T ss_dssp TCCGGGHHHHHHHHHHHHHHHTTSCTTSCCHHHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHH
T ss_pred HcCccccHHHHHHHHHHHHHHhcCCCChHHHHhHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHH
Confidence 6789999999999888754 12467899999999999999 677999999999996 99999999
Q ss_pred HHHHHHHhCCCc-HHHHHHHHHHHHHH-hhHHHHHHHH
Q psy6102 382 DYEQALDLLPND-QQILKEIAFVRKQM-RHHLNLEKMT 417 (426)
Q Consensus 382 ~l~kAl~l~P~n-~~a~~~l~~i~~~l-~~~~~a~k~~ 417 (426)
+|++|++++|+. ..+....+..+... ++++++.+.+
T Consensus 226 ~ferAL~LnP~~~id~~v~YA~~l~~~~gd~~~a~~~L 263 (301)
T 3u64_A 226 AFEHLTRYCSAHDPDHHITYADALCIPLNNRAGFDEAL 263 (301)
T ss_dssp HHHHHHHHCCTTCSHHHHHHHHHTTTTTTCHHHHHHHH
T ss_pred HHHHHHHhCCCCCchHHHHHHHHHHHhcCCHHHHHHHH
Confidence 999999999975 99999999988774 6666665543
No 242
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=98.14 E-value=1.2e-05 Score=77.94 Aligned_cols=102 Identities=13% Similarity=-0.018 Sum_probs=83.2
Q ss_pred HHHhccchhhhhh--hHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcc--hHHHHHHHHHHHHHccCHHHHHHHHHHHH
Q psy6102 278 TIKNSGNEYFKLN--RMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSY--YTAALLNMAAVQLKFKAYKRAINLCDDIL 353 (426)
Q Consensus 278 ~~~~~G~~~f~~g--~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~--~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL 353 (426)
.....|.+.+..| ++.+|...|+++.+. .|. ...++++ |++++|++++|...++.++
T Consensus 178 ~~Laea~v~l~~g~~~~q~A~~~f~El~~~----------------~p~~~~~~lLln---~~~~~g~~~eAe~~L~~l~ 238 (310)
T 3mv2_B 178 LNLAESYIKFATNKETATSNFYYYEELSQT----------------FPTWKTQLGLLN---LHLQQRNIAEAQGIVELLL 238 (310)
T ss_dssp HHHHHHHHHHHHTCSTTTHHHHHHHHHHTT----------------SCSHHHHHHHHH---HHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCccHHHHHHHHHHHHHh----------------CCCcccHHHHHH---HHHHcCCHHHHHHHHHHHH
Confidence 3444454444445 899999999998765 555 3455565 8999999999999999888
Q ss_pred Hh----------CCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHH
Q psy6102 354 LM----------EPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEI 400 (426)
Q Consensus 354 ~l----------dp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~~~l 400 (426)
++ +|+++.++.++..+...+|+ +|.+.++++.+++|+++.+....
T Consensus 239 ~~~p~~~~k~~~~p~~~~~LaN~i~l~~~lgk--~a~~l~~qL~~~~P~hp~i~d~~ 293 (310)
T 3mv2_B 239 SDYYSVEQKENAVLYKPTFLANQITLALMQGL--DTEDLTNQLVKLDHEHAFIKHHQ 293 (310)
T ss_dssp SHHHHTTTCHHHHSSHHHHHHHHHHHHHHTTC--TTHHHHHHHHHTTCCCHHHHHHH
T ss_pred HhcccccccccCCCCCHHHHHHHHHHHHHhCh--HHHHHHHHHHHhCCCChHHHHHH
Confidence 77 59999999999999999998 89999999999999999776543
No 243
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=98.07 E-value=5.4e-05 Score=63.58 Aligned_cols=89 Identities=10% Similarity=0.105 Sum_probs=78.7
Q ss_pred CcchHHHHHHHHHHHHHccCH---HHHHHHHHHHHHhCC-CCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHH
Q psy6102 322 RSYYTAALLNMAAVQLKFKAY---KRAINLCDDILLMEP-NNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQIL 397 (426)
Q Consensus 322 ~p~~~~~~~nlA~~~~~lg~~---~~Ai~~~~~AL~ldp-~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~ 397 (426)
..-.+...+++|+|+.+..+. .++|..++..++.+| ..-+.+|.+|..++.+|+|++|+.+.+.+|+++|+|.++.
T Consensus 36 ~~vs~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~QA~ 115 (134)
T 3o48_A 36 PTATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVG 115 (134)
T ss_dssp GGSCHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHHHH
T ss_pred CCCChhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHHHH
Confidence 445678899999999988755 578999999999998 4588999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhH
Q psy6102 398 KEIAFVRKQMRHH 410 (426)
Q Consensus 398 ~~l~~i~~~l~~~ 410 (426)
.....+...+.+.
T Consensus 116 ~Lk~~Ie~ki~kd 128 (134)
T 3o48_A 116 ALKSMVEDKIQKE 128 (134)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhh
Confidence 9999988877653
No 244
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=98.04 E-value=1.7e-05 Score=80.62 Aligned_cols=109 Identities=7% Similarity=-0.049 Sum_probs=63.5
Q ss_pred HHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHcc---CHHHHHHHHHHHH
Q psy6102 277 RTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFK---AYKRAINLCDDIL 353 (426)
Q Consensus 277 ~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg---~~~~Ai~~~~~AL 353 (426)
..++.+|..+...+.+++++.......+.. ...++.+++++|.+|.+.| ++++|+.+|++++
T Consensus 142 ~a~~~Lg~~y~~~~~~~~~~~~a~~~~~~a---------------~~~~~~a~~~Lg~~~~~~g~~~~~~~A~~~~~~aa 206 (452)
T 3e4b_A 142 EAGLAQVLLYRTQGTYDQHLDDVERICKAA---------------LNTTDICYVELATVYQKKQQPEQQAELLKQMEAGV 206 (452)
T ss_dssp THHHHHHHHHHHHTCGGGGHHHHHHHHHHH---------------TTTCTTHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCcccCHHHHHHHHHHH---------------HcCCHHHHHHHHHHHHHcCCcccHHHHHHHHHHHH
Confidence 456677777777775444444322221111 1122226666666666666 6666666666666
Q ss_pred HhCCCCHHHHHHHHHHHHHc----CChHHHHHHHHHHHHhCCCcHHHHHHHHHH
Q psy6102 354 LMEPNNVKALFRRGRAQVSM----NNFEQGLQDYEQALDLLPNDQQILKEIAFV 403 (426)
Q Consensus 354 ~ldp~~~kal~~lg~a~~~l----g~~~~Al~~l~kAl~l~P~n~~a~~~l~~i 403 (426)
+..|....+++++|.+|... +++++|+..|+++. |+++.++..++.+
T Consensus 207 ~~g~~~a~~~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa---~g~~~a~~~Lg~~ 257 (452)
T 3e4b_A 207 SRGTVTAQRVDSVARVLGDATLGTPDEKTAQALLEKIA---PGYPASWVSLAQL 257 (452)
T ss_dssp HTTCSCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHG---GGSTHHHHHHHHH
T ss_pred HCCCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHc---CCCHHHHHHHHHH
Confidence 66666666666666666544 56666666666665 6666666666665
No 245
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=98.04 E-value=2.3e-05 Score=67.80 Aligned_cols=79 Identities=13% Similarity=0.082 Sum_probs=68.6
Q ss_pred HHHHHHhccchhhhhh---hHHHHHHHHHHHHHHHHhhcccchhhhhhhcC-c-chHHHHHHHHHHHHHccCHHHHHHHH
Q psy6102 275 VIRTIKNSGNEYFKLN---RMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFR-S-YYTAALLNMAAVQLKFKAYKRAINLC 349 (426)
Q Consensus 275 ~a~~~~~~G~~~f~~g---~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~-p-~~~~~~~nlA~~~~~lg~~~~Ai~~~ 349 (426)
..+..++.|..+.+.+ +.++++..+++.++. + | ...++++++|..++++++|++|++++
T Consensus 31 ~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~----------------~~p~~~rd~lY~LAv~~~kl~~Y~~A~~y~ 94 (152)
T 1pc2_A 31 SKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPK----------------GSKEEQRDYVFYLAVGNYRLKEYEKALKYV 94 (152)
T ss_dssp CHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHH----------------SCHHHHHHHHHHHHHHHHHTSCHHHHHHHH
T ss_pred cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhc----------------CCccchHHHHHHHHHHHHHccCHHHHHHHH
Confidence 4466778888888877 888999999999987 5 6 67899999999999999999999999
Q ss_pred HHHHHhCCCCHHHHHHHHHH
Q psy6102 350 DDILLMEPNNVKALFRRGRA 369 (426)
Q Consensus 350 ~~AL~ldp~~~kal~~lg~a 369 (426)
+++|+++|+|..|..-+-.+
T Consensus 95 ~~lL~ieP~n~QA~~Lk~~i 114 (152)
T 1pc2_A 95 RGLLQTEPQNNQAKELERLI 114 (152)
T ss_dssp HHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHhcCCCCHHHHHHHHHH
Confidence 99999999999887665544
No 246
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=98.02 E-value=6.2e-05 Score=63.98 Aligned_cols=86 Identities=10% Similarity=0.108 Sum_probs=77.0
Q ss_pred cchHHHHHHHHHHHHHccCH---HHHHHHHHHHHHhCC-CCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHH
Q psy6102 323 SYYTAALLNMAAVQLKFKAY---KRAINLCDDILLMEP-NNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILK 398 (426)
Q Consensus 323 p~~~~~~~nlA~~~~~lg~~---~~Ai~~~~~AL~ldp-~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~~ 398 (426)
.......+++|+|+.+.... .++|..++..++-+| ..-+.+|.+|..++++|+|++|+.+.+.+|+++|+|.++..
T Consensus 36 ~vs~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA~~ 115 (144)
T 1y8m_A 36 TATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGA 115 (144)
T ss_dssp TSCHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHHHH
T ss_pred CCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHHHH
Confidence 56688999999999998765 478999999999888 56889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHh
Q psy6102 399 EIAFVRKQMR 408 (426)
Q Consensus 399 ~l~~i~~~l~ 408 (426)
....+...+.
T Consensus 116 Lk~~Ie~~i~ 125 (144)
T 1y8m_A 116 LKSMVEDKIQ 125 (144)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9888877654
No 247
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.99 E-value=3.7e-05 Score=86.98 Aligned_cols=126 Identities=13% Similarity=0.046 Sum_probs=93.2
Q ss_pred HhccchhhhhhhHHHHHHHHHHHHHHHHhhccc----chhhhhhh--cCcchHHHHHHHHHHHHHccCHHHHHHHHHHHH
Q psy6102 280 KNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQS----QSKTQQKH--FRSYYTAALLNMAAVQLKFKAYKRAINLCDDIL 353 (426)
Q Consensus 280 ~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~----~~~~~~~~--~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL 353 (426)
.+.|..+...|.|++|...|+++-......... ...+.+.+ .....+.+|+++|.++...|++++|+..|.+|
T Consensus 1053 ~eIA~Iai~lglyEEAf~IYkKa~~~~~A~~VLie~i~nldrAiE~Aervn~p~vWsqLAKAql~~G~~kEAIdsYiKA- 1131 (1630)
T 1xi4_A 1053 PDIANIAISNELFEEAFAIFRKFDVNTSAVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKA- 1131 (1630)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHcCCHHHHHHHHHHHHhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCHHHHHHHHHhc-
Confidence 346999999999999999998876432211111 11222221 13577899999999999999999999999776
Q ss_pred HhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhhHH
Q psy6102 354 LMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHL 411 (426)
Q Consensus 354 ~ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~~~l~~i~~~l~~~~ 411 (426)
+++.+|++.|.++..+|+|++|+++|+.|++..++. .+...++.++.++++.+
T Consensus 1132 ----dD~say~eVa~~~~~lGkyEEAIeyL~mArk~~~e~-~Idt~LafaYAKl~rle 1184 (1630)
T 1xi4_A 1132 ----DDPSSYMEVVQAANTSGNWEELVKYLQMARKKARES-YVETELIFALAKTNRLA 1184 (1630)
T ss_pred ----CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcccc-cccHHHHHHHHhhcCHH
Confidence 899999999999999999999999999999888442 22223555555444433
No 248
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.96 E-value=1.6e-05 Score=62.97 Aligned_cols=69 Identities=16% Similarity=0.184 Sum_probs=62.4
Q ss_pred HHHHHHhccchhhhhhh---HHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHH
Q psy6102 275 VIRTIKNSGNEYFKLNR---MHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDD 351 (426)
Q Consensus 275 ~a~~~~~~G~~~f~~g~---y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~ 351 (426)
.+..+...|..++..++ ..+|...+.+||++ +|.++.+++.+|..+++.|+|++|+..+++
T Consensus 5 ~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~----------------dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~ 68 (93)
T 3bee_A 5 TATQLAAKATTLYYLHKQAMTDEVSLLLEQALQL----------------EPYNEAALSLIANDHFISFRFQEAIDTWVL 68 (93)
T ss_dssp CHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHH----------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHH----------------CcCCHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 45677788888875555 79999999999999 999999999999999999999999999999
Q ss_pred HHHhCCCC
Q psy6102 352 ILLMEPNN 359 (426)
Q Consensus 352 AL~ldp~~ 359 (426)
+++.+|..
T Consensus 69 ~l~~~p~~ 76 (93)
T 3bee_A 69 LLDSNDPN 76 (93)
T ss_dssp HHTCCCTT
T ss_pred HHhhCCCC
Confidence 99999984
No 249
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=97.91 E-value=2e-05 Score=79.76 Aligned_cols=104 Identities=15% Similarity=0.194 Sum_probs=68.8
Q ss_pred HHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC
Q psy6102 278 TIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLMEP 357 (426)
Q Consensus 278 ~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ldp 357 (426)
.|...|..++..|.|++|+.+|.++ ..|..+|.|+.++|+|++|++.+.+|. +|
T Consensus 124 a~~~IGd~~~~~g~yeeA~~~Y~~a------------------------~n~~~LA~~L~~Lg~yq~AVea~~KA~--~~ 177 (449)
T 1b89_A 124 HIQQVGDRCYDEKMYDAAKLLYNNV------------------------SNFGRLASTLVHLGEYQAAVDGARKAN--ST 177 (449)
T ss_dssp -------------CTTTHHHHHHHT------------------------TCHHHHHHHHHTTTCHHHHHHHHHHHT--CH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHh------------------------hhHHHHHHHHHHhccHHHHHHHHHHcC--Cc
Confidence 7889999999999999999999865 245677777777777777777777761 11
Q ss_pred ---------------------------CCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHH
Q psy6102 358 ---------------------------NNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQM 407 (426)
Q Consensus 358 ---------------------------~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~~~l~~i~~~l 407 (426)
.+++-+..+..+|...|++++|+..+++++.+++.+..+...++.++..-
T Consensus 178 ~~Wk~v~~aCv~~~ef~lA~~~~l~L~~~ad~l~~lv~~Yek~G~~eEai~lLe~aL~le~ah~~~ftel~il~~ky 254 (449)
T 1b89_A 178 RTWKEVCFACVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTELAILYSKF 254 (449)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHTTTTTTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSTTCCHHHHHHHHHHHHTT
T ss_pred hhHHHHHHHHHHcCcHHHHHHHHHHHHhCHhhHHHHHHHHHHCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHhc
Confidence 22333334557788899999999999999999999999999998887754
No 250
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=97.88 E-value=0.00013 Score=72.13 Aligned_cols=45 Identities=7% Similarity=-0.051 Sum_probs=38.2
Q ss_pred hhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHH
Q psy6102 316 TQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLMEPNNVK 361 (426)
Q Consensus 316 ~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ldp~~~k 361 (426)
+.+..++|. ...|..+|.++...|++++|++.|.+|+.++|....
T Consensus 301 ~rAl~Ln~s-~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~~t 345 (372)
T 3ly7_A 301 NTGIDLEMS-WLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGANT 345 (372)
T ss_dssp HHHHHHCCC-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSHHH
T ss_pred HHHHhcCCC-HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcCh
Confidence 445555764 678899999999999999999999999999998764
No 251
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.87 E-value=7.4e-05 Score=84.61 Aligned_cols=108 Identities=15% Similarity=0.180 Sum_probs=89.0
Q ss_pred HHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC
Q psy6102 277 RTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLME 356 (426)
Q Consensus 277 ~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ld 356 (426)
..+...|..++..|+|++|+.+|.+|- .|..+|.|+.++|++++|++.+.+|....
T Consensus 1196 ad~~~iGd~le~eg~YeeA~~~Y~kA~------------------------ny~rLA~tLvkLge~q~AIEaarKA~n~~ 1251 (1630)
T 1xi4_A 1196 AHIQQVGDRCYDEKMYDAAKLLYNNVS------------------------NFGRLASTLVHLGEYQAAVDGARKANSTR 1251 (1630)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHhhh------------------------HHHHHHHHHHHhCCHHHHHHHHHHhCCHH
Confidence 456789999999999999999998863 46778888888888888888888774443
Q ss_pred C-------------------------CCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHh
Q psy6102 357 P-------------------------NNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMR 408 (426)
Q Consensus 357 p-------------------------~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~~~l~~i~~~l~ 408 (426)
+ .+++.+..++..|...|.|++|+..|+++|.++|.+......++.++...+
T Consensus 1252 aWkev~~acve~~Ef~LA~~cgl~Iiv~~deLeeli~yYe~~G~feEAI~LlE~aL~LeraH~gmftELaiLyaKy~ 1328 (1630)
T 1xi4_A 1252 TWKEVCFACVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTELAILYSKFK 1328 (1630)
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHHHhccChhHhHHHHHHHHHHHhCC
Confidence 3 245566688888999999999999999999999999999988888887643
No 252
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=97.81 E-value=2.2e-05 Score=79.48 Aligned_cols=128 Identities=10% Similarity=0.064 Sum_probs=55.9
Q ss_pred HHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhccc----------ch-hhhhhhcCcchHHHHHHHHHHHHHccCHH
Q psy6102 275 VIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQS----------QS-KTQQKHFRSYYTAALLNMAAVQLKFKAYK 343 (426)
Q Consensus 275 ~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~----------~~-~~~~~~~~p~~~~~~~nlA~~~~~lg~~~ 343 (426)
....+...+..+...|+|++|+.+++.+++..+..... .. .+-..-+++.+...|.++|.++...|.|+
T Consensus 60 D~~~y~~V~~~ae~~g~~EeAi~yl~~ark~~~~~~i~~~Li~~Y~Klg~l~e~e~f~~~pn~~a~~~IGd~~~~~g~ye 139 (449)
T 1b89_A 60 DPSSYMEVVQAANTSGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQVGDRCYDEKMYD 139 (449)
T ss_dssp -------------------------------------------------CHHHHTTTTTCC----------------CTT
T ss_pred CHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhCccchhHHHHHHHHHHhCCHHHHHHHHcCCcHHHHHHHHHHHHHcCCHH
Confidence 34467777778888899999999888888653221000 11 11111223344569999999999999999
Q ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhhHHHHHH
Q psy6102 344 RAINLCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLNLEK 415 (426)
Q Consensus 344 ~Ai~~~~~AL~ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~~~l~~i~~~l~~~~~a~k 415 (426)
+|+.+|..+ ..|.++|.|+..+|+|++|++++++| .++.+|.....+...+++.+.|+.
T Consensus 140 eA~~~Y~~a--------~n~~~LA~~L~~Lg~yq~AVea~~KA-----~~~~~Wk~v~~aCv~~~ef~lA~~ 198 (449)
T 1b89_A 140 AAKLLYNNV--------SNFGRLASTLVHLGEYQAAVDGARKA-----NSTRTWKEVCFACVDGKEFRLAQM 198 (449)
T ss_dssp THHHHHHHT--------TCHHHHHHHHHTTTCHHHHHHHHHHH-----TCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHh--------hhHHHHHHHHHHhccHHHHHHHHHHc-----CCchhHHHHHHHHHHcCcHHHHHH
Confidence 999999977 58999999999999999999999999 477788877777777777766653
No 253
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=97.44 E-value=0.00042 Score=60.46 Aligned_cols=120 Identities=8% Similarity=-0.007 Sum_probs=87.2
Q ss_pred HHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC
Q psy6102 277 RTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLME 356 (426)
Q Consensus 277 ~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ld 356 (426)
+.+.+....++..+.|+.|+.....++.+.+....... ......++..+|.+++..++|.+|...|++||++.
T Consensus 21 ~~l~dqik~L~d~~LY~sA~~La~lLlSl~~~~~~~~s-------p~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~ 93 (167)
T 3ffl_A 21 MNVIDHVRDMAAAGLHSNVRLLSSLLLTLSNNNPELFS-------PPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQK 93 (167)
T ss_dssp CCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSTTSSC-------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCccccc-------HHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHH
Confidence 44667777888899999999999999988432110000 11345688999999999999999999999998652
Q ss_pred ---CC----------------------CHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q psy6102 357 ---PN----------------------NVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVR 404 (426)
Q Consensus 357 ---p~----------------------~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~~~l~~i~ 404 (426)
+. ..+..|.+|.||..++++.+|+..++..- ..-..+.+...|++++
T Consensus 94 k~l~k~~s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai~~Le~Ip-~k~Rt~kvnm~LakLy 165 (167)
T 3ffl_A 94 KALSKTSKVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAIAILDGIP-SRQRTPKINMLLANLY 165 (167)
T ss_dssp HCC--------------------CCCCHHHHHHHHHHHHHHTTCHHHHHHHHHTSC-GGGCCHHHHHHHHHHC
T ss_pred HHHhcCCCccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHHHHHHhcCC-chhcCHHHHHHHHHHh
Confidence 11 13788999999999999999999877431 1124556666666554
No 254
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=97.43 E-value=0.00028 Score=71.49 Aligned_cols=93 Identities=5% Similarity=0.057 Sum_probs=74.5
Q ss_pred hhHHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHH
Q psy6102 273 EDVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDI 352 (426)
Q Consensus 273 lk~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~A 352 (426)
...+..+.++|..|..+|+|++|+.+|.++|++....- -...|.-+..++++|.+|..+|++++|+..+++|
T Consensus 326 ~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~l--------g~~Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~A 397 (429)
T 3qwp_A 326 IYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFF--------PGSHPVRGVQVMKVGKLQLHQGMFPQAMKNLRLA 397 (429)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHS--------CSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHc--------CCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 34788899999999999999999999999999843221 1236788889999999999999999999999999
Q ss_pred HHh-----CCCCH---HHHHHHHHHHHHc
Q psy6102 353 LLM-----EPNNV---KALFRRGRAQVSM 373 (426)
Q Consensus 353 L~l-----dp~~~---kal~~lg~a~~~l 373 (426)
+++ -|+++ +++.+++.+...+
T Consensus 398 l~i~~~~lG~~Hp~~~~~~~~l~~~~~e~ 426 (429)
T 3qwp_A 398 FDIMRVTHGREHSLIEDLILLLEECDANI 426 (429)
T ss_dssp HHHHHHHTCTTSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCChHHHHHHHHHHHHHHHH
Confidence 976 46664 4455566665443
No 255
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=97.38 E-value=0.00032 Score=71.08 Aligned_cols=81 Identities=4% Similarity=0.010 Sum_probs=68.1
Q ss_pred hHHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHH
Q psy6102 274 DVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDIL 353 (426)
Q Consensus 274 k~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL 353 (426)
..+..+.++|..|..+|+|++|+.+|+++|++....- -...|.-+..+.|+|.+|..+|+|++|+..|++||
T Consensus 338 ~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~l--------G~~Hp~~a~~l~nLa~~~~~qg~~~eA~~~~~~Al 409 (433)
T 3qww_A 338 YMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHY--------PVYSLNVASMWLKLGRLYMGLENKAAGEKALKKAI 409 (433)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHS--------CSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHc--------CCCChHHHHHHHHHHHHHHhccCHHHHHHHHHHHH
Confidence 4678899999999999999999999999999843221 12267788899999999999999999999999999
Q ss_pred Hh-----CCCCHHH
Q psy6102 354 LM-----EPNNVKA 362 (426)
Q Consensus 354 ~l-----dp~~~ka 362 (426)
++ -|+++..
T Consensus 410 ~i~~~~lG~~Hp~~ 423 (433)
T 3qww_A 410 AIMEVAHGKDHPYI 423 (433)
T ss_dssp HHHHHHTCTTCHHH
T ss_pred HHHHHHcCCCChHH
Confidence 76 4777543
No 256
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=97.24 E-value=0.0032 Score=67.42 Aligned_cols=115 Identities=11% Similarity=0.026 Sum_probs=95.0
Q ss_pred HHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHH-HHHHHHHHhCCCCHHHHHHHHHHH
Q psy6102 292 MHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAI-NLCDDILLMEPNNVKALFRRGRAQ 370 (426)
Q Consensus 292 y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai-~~~~~AL~ldp~~~kal~~lg~a~ 370 (426)
.......|.+||.. .|.+..+|+..|......++.++|+ ..|.+|+...|.+...|+..+...
T Consensus 325 ~~Rv~~~Ye~aL~~----------------~p~~~~lW~~ya~~~~~~~~~~~a~r~il~rAi~~~P~s~~Lwl~~a~~e 388 (679)
T 4e6h_A 325 KARMTYVYMQAAQH----------------VCFAPEIWFNMANYQGEKNTDSTVITKYLKLGQQCIPNSAVLAFSLSEQY 388 (679)
T ss_dssp HHHHHHHHHHHHHH----------------TTTCHHHHHHHHHHHHHHSCCTTHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH----------------cCCCHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 44566789999988 8999999999999999999999997 999999999999999999999999
Q ss_pred HHcCChHHHHHHHHHHHHhC-----------CC-----------cHHHHHHHHHHHHHHhhHHHHHHHHHHhhhc
Q psy6102 371 VSMNNFEQGLQDYEQALDLL-----------PN-----------DQQILKEIAFVRKQMRHHLNLEKMTYARMFQ 423 (426)
Q Consensus 371 ~~lg~~~~Al~~l~kAl~l~-----------P~-----------n~~a~~~l~~i~~~l~~~~~a~k~~~~k~f~ 423 (426)
...|++++|.+.|++++..- |. ...++.....+.++.+..+ +.|.+|.+.+.
T Consensus 389 e~~~~~e~aR~iyek~l~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~vWi~y~~~erR~~~l~-~AR~vf~~A~~ 462 (679)
T 4e6h_A 389 ELNTKIPEIETTILSCIDRIHLDLAALMEDDPTNESAINQLKSKLTYVYCVYMNTMKRIQGLA-ASRKIFGKCRR 462 (679)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCHH-HHHHHHHHHHH
T ss_pred HHhCCHHHHHHHHHHHHHHHHHHhhhhhhccCcchhhhhhhccchHHHHHHHHHHHHHcCCHH-HHHHHHHHHHH
Confidence 99999999999999999852 53 3346677677766666543 44557766554
No 257
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=97.14 E-value=0.0011 Score=70.84 Aligned_cols=98 Identities=5% Similarity=0.019 Sum_probs=75.9
Q ss_pred hHHHHHHHHHHHHHccCHHHHHHHHHHHHHh-CCCCHHHHHHHHHHHHHcC-ChHHHHHHHHHHHHhCCCcHHHHHHHHH
Q psy6102 325 YTAALLNMAAVQLKFKAYKRAINLCDDILLM-EPNNVKALFRRGRAQVSMN-NFEQGLQDYEQALDLLPNDQQILKEIAF 402 (426)
Q Consensus 325 ~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~l-dp~~~kal~~lg~a~~~lg-~~~~Al~~l~kAl~l~P~n~~a~~~l~~ 402 (426)
...+|...+....+.+..+.|...+.+|++. .+...+.|...|.+-...+ +++.|...|+++++..|+++..+.....
T Consensus 433 ~~~vWi~y~~~erR~~~l~~AR~vf~~A~~~~~~~~~~lyi~~A~lE~~~~~d~e~Ar~ife~~Lk~~p~~~~~w~~y~~ 512 (679)
T 4e6h_A 433 LTYVYCVYMNTMKRIQGLAASRKIFGKCRRLKKLVTPDIYLENAYIEYHISKDTKTACKVLELGLKYFATDGEYINKYLD 512 (679)
T ss_dssp HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTGGGSCTHHHHHHHHHHHTTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCchHHHHHHHH
Confidence 4557888888888888899999999999887 5556777777777766664 4899999999999999999988877777
Q ss_pred HHHHHhhHHHHHHHHHHhhhc
Q psy6102 403 VRKQMRHHLNLEKMTYARMFQ 423 (426)
Q Consensus 403 i~~~l~~~~~a~k~~~~k~f~ 423 (426)
.....++.+ ..|.+|.+.+.
T Consensus 513 fe~~~~~~~-~AR~lferal~ 532 (679)
T 4e6h_A 513 FLIYVNEES-QVKSLFESSID 532 (679)
T ss_dssp HHHHHTCHH-HHHHHHHHHTT
T ss_pred HHHhCCCHH-HHHHHHHHHHH
Confidence 766666544 44667777654
No 258
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=97.11 E-value=0.0033 Score=53.89 Aligned_cols=100 Identities=9% Similarity=0.022 Sum_probs=84.7
Q ss_pred hhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q psy6102 290 NRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLMEPNNVKALFRRGRA 369 (426)
Q Consensus 290 g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ldp~~~kal~~lg~a 369 (426)
+-.+.-++.|++|+..++... ......++.+|...|.. ..+++.++|.+.|+.++.+....++.|...|+-
T Consensus 33 ~~l~rlrd~YerAia~~Pp~k--------~~~wrrYI~LWIrYA~~-~ei~D~d~aR~vy~~a~~~hKkFAKiwi~~AqF 103 (161)
T 4h7y_A 33 ALLNKLIGRYSQAIEALPPDK--------YGQNESFARIQVRFAEL-KAIQEPDDARDYFQMARANCKKFAFVHISFAQF 103 (161)
T ss_dssp HHHHHHHHHHHHHHHHSCGGG--------GTTCHHHHHHHHHHHHH-HHHHCGGGCHHHHHHHHHHCTTBHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHcCCccc--------cccHHHHHHHHHHHHHH-HHhcCHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 334788899999999865431 33366778899999855 788999999999999999988889999999999
Q ss_pred HHHcCChHHHHHHHHHHHHhCCCcHHHHH
Q psy6102 370 QVSMNNFEQGLQDYEQALDLLPNDQQILK 398 (426)
Q Consensus 370 ~~~lg~~~~Al~~l~kAl~l~P~n~~a~~ 398 (426)
-..+|+...|...+.+|+.+.|...+...
T Consensus 104 EiRqgnl~kARkILg~AiG~~~k~~~~le 132 (161)
T 4h7y_A 104 ELSQGNVKKSKQLLQKAVERGAVPLEMLE 132 (161)
T ss_dssp HHHTTCHHHHHHHHHHHHHTTCBCHHHHH
T ss_pred HHHcccHHHHHHHHHHHhccCCCcHHHHH
Confidence 99999999999999999999998876544
No 259
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=96.89 E-value=0.0036 Score=52.12 Aligned_cols=77 Identities=14% Similarity=0.089 Sum_probs=57.5
Q ss_pred HHHHhccchhhhhhhHHH---HHHHHHHHHHHHHhhcccchhhhhhhcC-c-chHHHHHHHHHHHHHccCHHHHHHHHHH
Q psy6102 277 RTIKNSGNEYFKLNRMHD---AQRKYKKAVRYIKWYNQSQSKTQQKHFR-S-YYTAALLNMAAVQLKFKAYKRAINLCDD 351 (426)
Q Consensus 277 ~~~~~~G~~~f~~g~y~~---Ai~~y~kAl~~~~~~~~~~~~~~~~~~~-p-~~~~~~~nlA~~~~~lg~~~~Ai~~~~~ 351 (426)
+..++.|..+.+..+-.. +|..+...+.. . | ..-++++.+|..++++|+|.+|+.+++.
T Consensus 36 ~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~----------------~~p~~~Rd~lY~LAvg~yklg~Y~~A~~~~~~ 99 (126)
T 1nzn_A 36 STQFEYAWCLVRTRYNDDIRKGIVLLEELLPK----------------GSKEEQRDYVFYLAVGNYRLKEYEKALKYVRG 99 (126)
T ss_dssp HHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTT----------------SCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhc----------------CCcchHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 445555555555554443 66666665543 3 4 5678999999999999999999999999
Q ss_pred HHHhCCCCHHHHHHHHHH
Q psy6102 352 ILLMEPNNVKALFRRGRA 369 (426)
Q Consensus 352 AL~ldp~~~kal~~lg~a 369 (426)
.|+++|+|..|.--+..+
T Consensus 100 lL~~eP~n~QA~~Lk~~i 117 (126)
T 1nzn_A 100 LLQTEPQNNQAKELERLI 117 (126)
T ss_dssp HHHHCTTCHHHHHHHHHH
T ss_pred HHHhCCCCHHHHHHHHHH
Confidence 999999998887655443
No 260
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=96.60 E-value=0.012 Score=49.35 Aligned_cols=63 Identities=13% Similarity=0.042 Sum_probs=52.7
Q ss_pred hHHHHHHHHHHHHHHHHhhcccchhhhhhhcCc-chHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q psy6102 291 RMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRS-YYTAALLNMAAVQLKFKAYKRAINLCDDILLMEPNNVKALFRRGRA 369 (426)
Q Consensus 291 ~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p-~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ldp~~~kal~~lg~a 369 (426)
+...+|..+...++. .| ..-++++.+|..++++|+|++|..+++..|+++|+|..|.--+..+
T Consensus 58 d~~~GI~LLe~l~~~----------------~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~QA~~Lk~~I 121 (134)
T 3o48_A 58 DERLGVKILTDIYKE----------------AESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKSMV 121 (134)
T ss_dssp HHHHHHHHHHHHHHH----------------CGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhc----------------CcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHHHHHHHHHH
Confidence 566788888777765 55 5678999999999999999999999999999999998876555443
No 261
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=96.50 E-value=0.016 Score=57.68 Aligned_cols=113 Identities=12% Similarity=0.021 Sum_probs=88.2
Q ss_pred HHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhccc------chhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHH
Q psy6102 276 IRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQS------QSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLC 349 (426)
Q Consensus 276 a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~------~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~ 349 (426)
.+.+...|......++...|+..+.+|+.+..-.... +.......+......+...++.+++..|++.+|+..+
T Consensus 115 f~~l~~~~~~~~~~~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l~~g~~~~a~~~l 194 (388)
T 2ff4_A 115 FVAEKTAGVHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVIAEL 194 (388)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
Confidence 3445555666666788999999999999874211100 1112223344566778888999999999999999999
Q ss_pred HHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHH
Q psy6102 350 DDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALD 388 (426)
Q Consensus 350 ~~AL~ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~ 388 (426)
..++..+|-+-.+|..+-.+|...|+..+|++.|+++.+
T Consensus 195 ~~~~~~~P~~E~~~~~lm~al~~~Gr~~~Al~~y~~~r~ 233 (388)
T 2ff4_A 195 EALTFEHPYREPLWTQLITAYYLSDRQSDALGAYRRVKT 233 (388)
T ss_dssp HHHHHHSTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999998755
No 262
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=96.33 E-value=0.052 Score=55.58 Aligned_cols=142 Identities=9% Similarity=-0.009 Sum_probs=101.1
Q ss_pred HHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccch-hhhh----------h-------------hcCcchHHHHHH
Q psy6102 276 IRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQS-KTQQ----------K-------------HFRSYYTAALLN 331 (426)
Q Consensus 276 a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~-~~~~----------~-------------~~~p~~~~~~~n 331 (426)
...|...+..+...|+.+.|...|.+|+.. |......- .... . ...+....+|..
T Consensus 213 ~~lW~~ya~~~~~~~~~~~ar~i~erAi~~-P~~~~l~~~y~~~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~lw~~ 291 (493)
T 2uy1_A 213 EEVYFFYSEYLIGIGQKEKAKKVVERGIEM-SDGMFLSLYYGLVMDEEAVYGDLKRKYSMGEAESAEKVFSKELDLLRIN 291 (493)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CCSSHHHHHHHHHTTCTHHHHHHHHHTC----------CHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhC-CCcHHHHHHHHhhcchhHHHHHHHHHHHhhccchhhhhcccccHHHHHH
Confidence 567888888888899999999999999988 54321110 0000 0 011223467888
Q ss_pred HHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC-ChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhhH
Q psy6102 332 MAAVQLKFKAYKRAINLCDDILLMEPNNVKALFRRGRAQVSMN-NFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHH 410 (426)
Q Consensus 332 lA~~~~~lg~~~~Ai~~~~~AL~ldp~~~kal~~lg~a~~~lg-~~~~Al~~l~kAl~l~P~n~~a~~~l~~i~~~l~~~ 410 (426)
.+....+.+..+.|...+.+| ...+.....|...|..-...+ +.+.|...|+.+++..|+++..+.........+++.
T Consensus 292 y~~~~~r~~~~~~AR~i~~~A-~~~~~~~~v~i~~A~lE~~~~~d~~~ar~ife~al~~~~~~~~~~~~yid~e~~~~~~ 370 (493)
T 2uy1_A 292 HLNYVLKKRGLELFRKLFIEL-GNEGVGPHVFIYCAFIEYYATGSRATPYNIFSSGLLKHPDSTLLKEEFFLFLLRIGDE 370 (493)
T ss_dssp HHHHHHHHHCHHHHHHHHHHH-TTSCCCHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCH
T ss_pred HHHHHHHcCCHHHHHHHHHHh-hCCCCChHHHHHHHHHHHHHCCChHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCH
Confidence 888888899999999999999 544456777777777766665 699999999999999999988766666666665554
Q ss_pred HHHHHHHHHh
Q psy6102 411 LNLEKMTYAR 420 (426)
Q Consensus 411 ~~a~k~~~~k 420 (426)
+. .|.+|.+
T Consensus 371 ~~-aR~l~er 379 (493)
T 2uy1_A 371 EN-ARALFKR 379 (493)
T ss_dssp HH-HHHHHHH
T ss_pred HH-HHHHHHH
Confidence 43 3445554
No 263
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=96.28 E-value=0.023 Score=48.15 Aligned_cols=77 Identities=13% Similarity=0.026 Sum_probs=58.2
Q ss_pred HHHHhccchhhhhh---hHHHHHHHHHHHHHHHHhhcccchhhhhhhcCc-chHHHHHHHHHHHHHccCHHHHHHHHHHH
Q psy6102 277 RTIKNSGNEYFKLN---RMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRS-YYTAALLNMAAVQLKFKAYKRAINLCDDI 352 (426)
Q Consensus 277 ~~~~~~G~~~f~~g---~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p-~~~~~~~nlA~~~~~lg~~~~Ai~~~~~A 352 (426)
+..++.+..+.+.. +-.++|..++..+.. .| ..-++++.+|..++++|+|++|..+++..
T Consensus 40 ~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~----------------~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~l 103 (144)
T 1y8m_A 40 QSRFNYAWGLIKSTDVNDERLGVKILTDIYKE----------------AESRRRECLYYLTIGCYKLGEYSMAKRYVDTL 103 (144)
T ss_dssp HHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHH----------------CCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhc----------------CccchhHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 34445555555444 455677777777665 45 57789999999999999999999999999
Q ss_pred HHhCCCCHHHHHHHHHH
Q psy6102 353 LLMEPNNVKALFRRGRA 369 (426)
Q Consensus 353 L~ldp~~~kal~~lg~a 369 (426)
|+++|+|..|.--+..+
T Consensus 104 L~~eP~n~QA~~Lk~~I 120 (144)
T 1y8m_A 104 FEHERNNKQVGALKSMV 120 (144)
T ss_dssp HHTCCCCHHHHHHHHHH
T ss_pred HhcCCCcHHHHHHHHHH
Confidence 99999998876554433
No 264
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=95.81 E-value=0.03 Score=48.68 Aligned_cols=89 Identities=10% Similarity=0.116 Sum_probs=71.6
Q ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC---------HHHHHHHHHHHHHcCChHHHHHHHHHHHHhC---CC---
Q psy6102 328 ALLNMAAVQLKFKAYKRAINLCDDILLMEPNN---------VKALFRRGRAQVSMNNFEQGLQDYEQALDLL---PN--- 392 (426)
Q Consensus 328 ~~~nlA~~~~~lg~~~~Ai~~~~~AL~ldp~~---------~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~---P~--- 392 (426)
++..-...++..+.|+.|+-.+..++.+..++ ..+++.+|.+++..++|.+|...|++||.+. |.
T Consensus 22 ~l~dqik~L~d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s 101 (167)
T 3ffl_A 22 NVIDHVRDMAAAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSK 101 (167)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC-----
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 44555566778999999999999988775433 4589999999999999999999999997642 22
Q ss_pred -------------------cHHHHHHHHHHHHHHhhHHHHHHH
Q psy6102 393 -------------------DQQILKEIAFVRKQMRHHLNLEKM 416 (426)
Q Consensus 393 -------------------n~~a~~~l~~i~~~l~~~~~a~k~ 416 (426)
+.++...++.|+..+++.++|...
T Consensus 102 ~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai~~ 144 (167)
T 3ffl_A 102 VRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAIAI 144 (167)
T ss_dssp ---------------CCCCHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred ccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHHHHH
Confidence 227889999999999999988653
No 265
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=95.81 E-value=0.035 Score=59.75 Aligned_cols=64 Identities=11% Similarity=0.197 Sum_probs=57.1
Q ss_pred cchHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHH
Q psy6102 323 SYYTAALLNMAAVQLKFKAYKRAINLCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQA 386 (426)
Q Consensus 323 p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kA 386 (426)
|....++.-.|.-++..|+|+-|++.+++|+.+-|...+.|+.++.||..+|+|+.|+-.++-+
T Consensus 334 ~~~~~LL~~Qa~FLl~K~~~elAL~~Ak~AV~~aPseF~tW~~La~vYi~l~d~e~ALLtLNSc 397 (754)
T 4gns_B 334 NCMSDLLNIQTNFLLNRGDYELALGVSNTSTELALDSFESWYNLARCHIKKEEYEKALFAINSM 397 (754)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHS
T ss_pred CcchHHHHHHHHHHhccCcHHHHHHHHHHHHhcCchhhHHHHHHHHHHHHhccHHHHHHHHhcC
Confidence 3445577777888889999999999999999999999999999999999999999999777655
No 266
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=95.68 E-value=0.14 Score=52.24 Aligned_cols=124 Identities=7% Similarity=-0.048 Sum_probs=95.1
Q ss_pred HHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHcc-CHHHHHHHHHHHHH
Q psy6102 276 IRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFK-AYKRAINLCDDILL 354 (426)
Q Consensus 276 a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg-~~~~Ai~~~~~AL~ 354 (426)
...|...+....+.++.+.|...|.+| .. .+....+|...|..-...+ +++.|...++.+++
T Consensus 286 ~~lw~~y~~~~~r~~~~~~AR~i~~~A-~~----------------~~~~~~v~i~~A~lE~~~~~d~~~ar~ife~al~ 348 (493)
T 2uy1_A 286 DLLRINHLNYVLKKRGLELFRKLFIEL-GN----------------EGVGPHVFIYCAFIEYYATGSRATPYNIFSSGLL 348 (493)
T ss_dssp HHHHHHHHHHHHHHHCHHHHHHHHHHH-TT----------------SCCCHHHHHHHHHHHHHHHCCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHh-hC----------------CCCChHHHHHHHHHHHHHCCChHHHHHHHHHHHH
Confidence 345666666666778889999999988 32 2334567777777777766 69999999999999
Q ss_pred hCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhhHHHHHHHHHHhh
Q psy6102 355 MEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLNLEKMTYARM 421 (426)
Q Consensus 355 ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~~~l~~i~~~l~~~~~a~k~~~~k~ 421 (426)
..|+.++.+...+.....+|+.+.|...|+++ +.....+..........|..+.. +.++.+.
T Consensus 349 ~~~~~~~~~~~yid~e~~~~~~~~aR~l~er~----~k~~~lw~~~~~fE~~~G~~~~~-r~v~~~~ 410 (493)
T 2uy1_A 349 KHPDSTLLKEEFFLFLLRIGDEENARALFKRL----EKTSRMWDSMIEYEFMVGSMELF-RELVDQK 410 (493)
T ss_dssp HCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHS----CCBHHHHHHHHHHHHHHSCHHHH-HHHHHHH
T ss_pred HCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH----HHHHHHHHHHHHHHHHCCCHHHH-HHHHHHH
Confidence 99999998888888888999999999999998 45677888877777777765443 3344443
No 267
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=95.08 E-value=0.4 Score=49.06 Aligned_cols=121 Identities=9% Similarity=0.057 Sum_probs=80.6
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC-CCCHHHHH
Q psy6102 286 YFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLME-PNNVKALF 364 (426)
Q Consensus 286 ~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ld-p~~~kal~ 364 (426)
..+.++.+.|...|.+..+. .+.| +...|..+-.++.+.|++++|++.+++..+.. .-+...|.
T Consensus 80 ~~~~~~l~~A~~lf~~M~~~--------------G~~P-d~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~tyn 144 (501)
T 4g26_A 80 SSPNPGLSRGFDIFKQMIVD--------------KVVP-NEATFTNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRSYG 144 (501)
T ss_dssp SSCCHHHHHHHHHHHHHHHT--------------TCCC-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHH
T ss_pred hhhcchHHHHHHHHHHHHHh--------------CCCC-CHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCccceeh
Confidence 34556677777777765543 1123 45667777788888888888888887776543 22566777
Q ss_pred HHHHHHHHcCChHHHHHHHHHHHHh--CCCcHHHHHHHHHHHHHHhhHHHHHHHHHHhhhc
Q psy6102 365 RRGRAQVSMNNFEQGLQDYEQALDL--LPNDQQILKEIAFVRKQMRHHLNLEKMTYARMFQ 423 (426)
Q Consensus 365 ~lg~a~~~lg~~~~Al~~l~kAl~l--~P~n~~a~~~l~~i~~~l~~~~~a~k~~~~k~f~ 423 (426)
.+-.+|...|+.++|.+.|+...+. .| |...+..+-..+...++.+++.+ ++++|.+
T Consensus 145 ~lI~~~~~~g~~~~A~~l~~~M~~~G~~P-d~~ty~~Li~~~~~~g~~d~A~~-ll~~Mr~ 203 (501)
T 4g26_A 145 PALFGFCRKGDADKAYEVDAHMVESEVVP-EEPELAALLKVSMDTKNADKVYK-TLQRLRD 203 (501)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHTTCCC-CHHHHHHHHHHHHHTTCHHHHHH-HHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHhcCCCC-CHHHHHHHHHHHhhCCCHHHHHH-HHHHHHH
Confidence 7777788888888888888877664 33 44555666666677777766654 5555543
No 268
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=94.75 E-value=0.18 Score=47.31 Aligned_cols=70 Identities=13% Similarity=0.118 Sum_probs=62.7
Q ss_pred HHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHH
Q psy6102 334 AVQLKFKAYKRAINLCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFV 403 (426)
Q Consensus 334 ~~~~~lg~~~~Ai~~~~~AL~ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~~~l~~i 403 (426)
..+++.+..++|++.+...++-+|.+++.-..+-+.+.-.|++++|..-++.+.+++|+.......+..+
T Consensus 5 ~~ll~~g~L~~al~~~~~~VR~~P~da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~~~~~a~~yr~l 74 (273)
T 1zbp_A 5 KNALSEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPGASQLRHL 74 (273)
T ss_dssp HHHTTTTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHHHHHHHHHH
T ss_pred HHHHhCCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCchhhHHHHHHHHH
Confidence 3467889999999999999999999999999999999999999999999999999999987665554444
No 269
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=94.48 E-value=0.19 Score=51.49 Aligned_cols=80 Identities=8% Similarity=0.000 Sum_probs=71.6
Q ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHH
Q psy6102 328 ALLNMAAVQLKFKAYKRAINLCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQM 407 (426)
Q Consensus 328 ~~~nlA~~~~~lg~~~~Ai~~~~~AL~ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~~~l~~i~~~l 407 (426)
++..+|.+......+..|..+|.+|+.+.|++..+|..+|.+....++.-+|+-+|-+++....-.+.+..++..+....
T Consensus 154 ~l~~LGDL~RY~~~~~~A~~~Y~~A~~~~P~~G~~~nqLavla~~~~~~l~a~y~y~rsl~~~~Pf~~a~~nL~~~f~~~ 233 (497)
T 1ya0_A 154 CLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSKA 233 (497)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTBSHHHHHHHHHHHHTTCHHHHHHHHHHHHSSSBCCHHHHHHHHHHHHHH
T ss_pred HHHHcccHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHhcccccHHHHHHHHHHHhcCCCChhHHHHHHHHHHHH
Confidence 56667777777788899999999999999999999999999999999999999999999998777888888888877653
No 270
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=94.26 E-value=0.74 Score=40.22 Aligned_cols=75 Identities=19% Similarity=0.123 Sum_probs=59.5
Q ss_pred cchHHHHHHHHHHHHHccCHHHHHHHHHHHH--HhC---------------CCCHHHH-HHHHHHHHHcCChHHHHHHHH
Q psy6102 323 SYYTAALLNMAAVQLKFKAYKRAINLCDDIL--LME---------------PNNVKAL-FRRGRAQVSMNNFEQGLQDYE 384 (426)
Q Consensus 323 p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL--~ld---------------p~~~kal-~~lg~a~~~lg~~~~Al~~l~ 384 (426)
-+-..+.+-.+.||.++++|..|+..++..| +.+ |.+-+.+ .-+|.++...|+.++|+.+|.
T Consensus 59 lNT~Ts~YYk~LCy~klKdYkkA~~~le~il~~kvd~d~~~d~~~~~ffvd~~DkEfFy~l~a~lltq~g~r~EaI~y~~ 138 (242)
T 3kae_A 59 LNTCTSKYYESLCYKKKKDYKKAIKSLESILEGKVERDPDVDARIQEMFVDPGDEEFFESLLGDLCTLSGYREEGIGHYV 138 (242)
T ss_dssp CCBHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSBCCCCCCHHHHTTSCCTTCHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCcccccccceeeeccchHHHHHHHHHHHHHHhcCHHHhhhHhh
Confidence 3456777788999999999999999999999 332 4445544 456889999999999999999
Q ss_pred HHHHhCCCcHHHH
Q psy6102 385 QALDLLPNDQQIL 397 (426)
Q Consensus 385 kAl~l~P~n~~a~ 397 (426)
......|--+.+-
T Consensus 139 ~Sf~~~~lf~~vE 151 (242)
T 3kae_A 139 RSFGKSFLFSPVE 151 (242)
T ss_dssp HHHHHCCCHHHHH
T ss_pred hhcCCccccchHH
Confidence 9998887655443
No 271
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=94.26 E-value=0.21 Score=49.63 Aligned_cols=99 Identities=10% Similarity=0.039 Sum_probs=80.8
Q ss_pred hccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC---C
Q psy6102 281 NSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLME---P 357 (426)
Q Consensus 281 ~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ld---p 357 (426)
.+|..|+..|+|.+|+..+++.++.+..... .....+++.....+|..++++.++...+.+|.... +
T Consensus 104 kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd----------~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ai~ 173 (394)
T 3txn_A 104 RLIALYFDTALYTEALALGAQLLRELKKLDD----------KNLLVEVQLLESKTYHALSNLPKARAALTSARTTANAIY 173 (394)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHTTSSC----------THHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHhcccc----------chhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhccCC
Confidence 7899999999999999999999988654321 34667889999999999999999999999997653 1
Q ss_pred CC----HHHHHHHHHHHH-HcCChHHHHHHHHHHHHh
Q psy6102 358 NN----VKALFRRGRAQV-SMNNFEQGLQDYEQALDL 389 (426)
Q Consensus 358 ~~----~kal~~lg~a~~-~lg~~~~Al~~l~kAl~l 389 (426)
.+ +.....-|..++ ..++|..|..+|-.+++-
T Consensus 174 ~~p~i~a~i~~~~Gi~~l~~~rdyk~A~~~F~eaf~~ 210 (394)
T 3txn_A 174 CPPKVQGALDLQSGILHAADERDFKTAFSYFYEAFEG 210 (394)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhhHHHHHhccCHHHHHHHHHHHHhc
Confidence 22 344556688888 899999999999988753
No 272
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=94.11 E-value=0.25 Score=49.57 Aligned_cols=102 Identities=12% Similarity=0.120 Sum_probs=81.7
Q ss_pred HHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC
Q psy6102 277 RTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLME 356 (426)
Q Consensus 277 ~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ld 356 (426)
..+..+|..+++.|+++.|++.|.++...... ......++.....+++..++|..+...++++-.+.
T Consensus 132 ~~~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~-------------~~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~ 198 (429)
T 4b4t_R 132 QAWINLGEYYAQIGDKDNAEKTLGKSLSKAIS-------------TGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMI 198 (429)
T ss_dssp SCCHHHHHHHHHHCCCTTHHHHHHHHHHHHTC-------------CCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCC-------------hHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhh
Confidence 34678899999999999999999998876422 35668899999999999999999999999987653
Q ss_pred C--CC----HHHHHHHHHHHHHcCChHHHHHHHHHHHHhCC
Q psy6102 357 P--NN----VKALFRRGRAQVSMNNFEQGLQDYEQALDLLP 391 (426)
Q Consensus 357 p--~~----~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P 391 (426)
. .+ .+.....|.++...++|..|...|-.++.-..
T Consensus 199 ~~~~d~~~~~~lk~~~gl~~l~~r~f~~Aa~~f~e~~~t~~ 239 (429)
T 4b4t_R 199 EKGGDWERRNRYKTYYGIHCLAVRNFKEAAKLLVDSLATFT 239 (429)
T ss_dssp TTCCCTHHHHHHHHHHHHGGGGTSCHHHHHHHHHHHHHHSC
T ss_pred hcCCCHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHhccCC
Confidence 2 22 23445567778889999999999988876543
No 273
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=93.02 E-value=0.82 Score=42.79 Aligned_cols=63 Identities=8% Similarity=0.032 Sum_probs=58.0
Q ss_pred chhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHH
Q psy6102 284 NEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLMEPNNVKA 362 (426)
Q Consensus 284 ~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ldp~~~ka 362 (426)
..+++.++.++|+......|+. +|.++.....+-..+.-.|+|+.|..-++.+.+++|.....
T Consensus 5 ~~ll~~g~L~~al~~~~~~VR~----------------~P~da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~~~~~ 67 (273)
T 1zbp_A 5 KNALSEGQLQQALELLIEAIKA----------------SPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPG 67 (273)
T ss_dssp HHHTTTTCHHHHHHHHHHHHHT----------------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHHH
T ss_pred HHHHhCCCHHHHHHHHHHHHHh----------------CCcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCchhhHH
Confidence 4577889999999999999998 99999999999999999999999999999999999987553
No 274
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=92.65 E-value=0.75 Score=39.31 Aligned_cols=92 Identities=8% Similarity=-0.048 Sum_probs=74.8
Q ss_pred CcchHHHHHHHHHHHHHccCH------HHHHHHHHHHHHhCCC--------CHHHHHHHHHHHHHcCChHHHHHHHHHHH
Q psy6102 322 RSYYTAALLNMAAVQLKFKAY------KRAINLCDDILLMEPN--------NVKALFRRGRAQVSMNNFEQGLQDYEQAL 387 (426)
Q Consensus 322 ~p~~~~~~~nlA~~~~~lg~~------~~Ai~~~~~AL~ldp~--------~~kal~~lg~a~~~lg~~~~Al~~l~kAl 387 (426)
.|.+.+.|.+......+.|+. ++-++.|++|+..-|- +...|.+.|.- ..+++.++|.+.|+.|+
T Consensus 9 ~p~~yd~W~~yl~llE~~g~p~~d~~l~rlrd~YerAia~~Pp~k~~~wrrYI~LWIrYA~~-~ei~D~d~aR~vy~~a~ 87 (161)
T 4h7y_A 9 MANNPEDWLSLLLKLEKNSVPLSDALLNKLIGRYSQAIEALPPDKYGQNESFARIQVRFAEL-KAIQEPDDARDYFQMAR 87 (161)
T ss_dssp -CCSHHHHHHHHHHHHHHTCSCCHHHHHHHHHHHHHHHHHSCGGGGTTCHHHHHHHHHHHHH-HHHHCGGGCHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCCchhhHHHHHHHHHHHHHHcCCccccccHHHHHHHHHHHHHH-HHhcCHHHHHHHHHHHH
Confidence 799999999999999989999 9999999999987664 35567777754 66699999999999999
Q ss_pred HhCCCcHHHHHHHHHHHHHHhhHHHHH
Q psy6102 388 DLLPNDQQILKEIAFVRKQMRHHLNLE 414 (426)
Q Consensus 388 ~l~P~n~~a~~~l~~i~~~l~~~~~a~ 414 (426)
.++..-+-++...++.+.+.++...+.
T Consensus 88 ~~hKkFAKiwi~~AqFEiRqgnl~kAR 114 (161)
T 4h7y_A 88 ANCKKFAFVHISFAQFELSQGNVKKSK 114 (161)
T ss_dssp HHCTTBHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHhHHHHHHHHHHHHHHHHcccHHHHH
Confidence 997777777777777777766666554
No 275
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=92.35 E-value=3.2 Score=42.28 Aligned_cols=129 Identities=14% Similarity=0.072 Sum_probs=91.7
Q ss_pred HHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHc---------cCHHHHHHHH
Q psy6102 279 IKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKF---------KAYKRAINLC 349 (426)
Q Consensus 279 ~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~l---------g~~~~Ai~~~ 349 (426)
+...-+.+.+.|++++|+..|.+..+. .+.|+ ...|..+-.++.+. +..++|.+.+
T Consensus 29 l~~~id~c~k~G~~~~A~~lf~~M~~~--------------Gv~pd-~~tyn~Li~~c~~~~~~~~~~~~~~l~~A~~lf 93 (501)
T 4g26_A 29 LKQKLDMCSKKGDVLEALRLYDEARRN--------------GVQLS-QYHYNVLLYVCSLAEAATESSPNPGLSRGFDIF 93 (501)
T ss_dssp HHHHHHHTTTSCCHHHHHHHHHHHHHH--------------TCCCC-HHHHHHHHHHHTTCCCCSSSSCCHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHc--------------CCCCC-HhHHHHHHHHHHhCCchhhhhhcchHHHHHHHH
Confidence 344457788999999999999988764 11343 34444444444333 3478899988
Q ss_pred HHHHHhC-CCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHh--CCCcHHHHHHHHHHHHHHhhHHHHHHHHHHhhhcC
Q psy6102 350 DDILLME-PNNVKALFRRGRAQVSMNNFEQGLQDYEQALDL--LPNDQQILKEIAFVRKQMRHHLNLEKMTYARMFQN 424 (426)
Q Consensus 350 ~~AL~ld-p~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l--~P~n~~a~~~l~~i~~~l~~~~~a~k~~~~k~f~~ 424 (426)
++..... +-+...|..+-.+|...|++++|++.|++..+. .| |...+..+-..+...++.+++.+ +|..|...
T Consensus 94 ~~M~~~G~~Pd~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~g~~P-d~~tyn~lI~~~~~~g~~~~A~~-l~~~M~~~ 169 (501)
T 4g26_A 94 KQMIVDKVVPNEATFTNGARLAVAKDDPEMAFDMVKQMKAFGIQP-RLRSYGPALFGFCRKGDADKAYE-VDAHMVES 169 (501)
T ss_dssp HHHHHTTCCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCC-CHHHHHHHHHHHHHTTCHHHHHH-HHHHHHHT
T ss_pred HHHHHhCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCC-ccceehHHHHHHHHCCCHHHHHH-HHHHHHhc
Confidence 8776543 236778888999999999999999999998775 34 55666666677777788777754 67776544
No 276
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=92.30 E-value=1.7 Score=42.75 Aligned_cols=86 Identities=8% Similarity=-0.029 Sum_probs=69.6
Q ss_pred HHHHHHHHHccCHHHHHHHHHHHHHhCC--------C--C------------HHHHHHHHHHHHHcCChHHHHHHHHHHH
Q psy6102 330 LNMAAVQLKFKAYKRAINLCDDILLMEP--------N--N------------VKALFRRGRAQVSMNNFEQGLQDYEQAL 387 (426)
Q Consensus 330 ~nlA~~~~~lg~~~~Ai~~~~~AL~ldp--------~--~------------~kal~~lg~a~~~lg~~~~Al~~l~kAl 387 (426)
...|......++.+.|+..+.+||.+-. . . ..++..++.++..+|++.+|+..++.++
T Consensus 119 ~~~~~~~~~~~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l~~g~~~~a~~~l~~~~ 198 (388)
T 2ff4_A 119 KTAGVHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVIAELEALT 198 (388)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 3334444556889999999999998731 1 1 2356677888999999999999999999
Q ss_pred HhCCCcHHHHHHHHHHHHHHhhHHHHHH
Q psy6102 388 DLLPNDQQILKEIAFVRKQMRHHLNLEK 415 (426)
Q Consensus 388 ~l~P~n~~a~~~l~~i~~~l~~~~~a~k 415 (426)
..+|-+..++..+-.++...++..+|.+
T Consensus 199 ~~~P~~E~~~~~lm~al~~~Gr~~~Al~ 226 (388)
T 2ff4_A 199 FEHPYREPLWTQLITAYYLSDRQSDALG 226 (388)
T ss_dssp HHSTTCHHHHHHHHHHHHTTTCHHHHHH
T ss_pred HhCCCCHHHHHHHHHHHHHcCCHHHHHH
Confidence 9999999999999999999998887764
No 277
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=91.66 E-value=1.4 Score=43.70 Aligned_cols=93 Identities=11% Similarity=0.078 Sum_probs=68.9
Q ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHh----CC--CCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhC---CCcHH---
Q psy6102 328 ALLNMAAVQLKFKAYKRAINLCDDILLM----EP--NNVKALFRRGRAQVSMNNFEQGLQDYEQALDLL---PNDQQ--- 395 (426)
Q Consensus 328 ~~~nlA~~~~~lg~~~~Ai~~~~~AL~l----dp--~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~---P~n~~--- 395 (426)
+=..+|..|+..|+|.+|++.+.+.++- |. .-.+.+....++|..++++..+.+.|.+|.... +-++.
T Consensus 101 l~~kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ai~~~p~i~a 180 (394)
T 3txn_A 101 LEARLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALSNLPKARAALTSARTTANAIYCPPKVQG 180 (394)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHH
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhccCCCCHHHHH
Confidence 3348899999999999999999888863 21 126678888999999999999999999997753 23343
Q ss_pred -HHHHHHHHHH-HHhhHHHHHHHHHHh
Q psy6102 396 -ILKEIAFVRK-QMRHHLNLEKMTYAR 420 (426)
Q Consensus 396 -a~~~l~~i~~-~l~~~~~a~k~~~~k 420 (426)
+...-+.++. ..+++++|....|..
T Consensus 181 ~i~~~~Gi~~l~~~rdyk~A~~~F~ea 207 (394)
T 3txn_A 181 ALDLQSGILHAADERDFKTAFSYFYEA 207 (394)
T ss_dssp HHHHHHHHHHHHTTSCHHHHHHHHHHH
T ss_pred HHHHHhhHHHHHhccCHHHHHHHHHHH
Confidence 3334444455 567778887777665
No 278
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=91.16 E-value=1.5 Score=47.06 Aligned_cols=108 Identities=9% Similarity=0.027 Sum_probs=77.6
Q ss_pred hHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHH--Hc-cCHHHHHHHHHHHHH--------hCCCC
Q psy6102 291 RMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQL--KF-KAYKRAINLCDDILL--------MEPNN 359 (426)
Q Consensus 291 ~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~--~l-g~~~~Ai~~~~~AL~--------ldp~~ 359 (426)
-++.|+..+.+.... +|..... +.++.+.+ ++ .+--+|+....++|+ +.+.+
T Consensus 264 ~~~~a~~~le~L~~~----------------~p~~~~~-~~~~~i~~~~~~~~~Ev~av~ll~~~l~~~~~~~~~l~~~~ 326 (754)
T 4gns_B 264 LVDFTIDYLKGLTKK----------------DPIHDIY-YKTAMITILDHIETKELDMITILNETLDPLLSLLNDLPPRD 326 (754)
T ss_dssp GHHHHHHHHHHHHHH----------------CGGGHHH-HHHHHHHHHTTCGGGHHHHHHHHHHHHHHHHHHHHTCSSCC
T ss_pred HHHHHHHHHHHHHhh----------------CCchhHH-HHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhcccc
Confidence 367788888877666 6655433 33333322 12 345567777777763 23333
Q ss_pred ----------HHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhhHHHHHH
Q psy6102 360 ----------VKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLNLEK 415 (426)
Q Consensus 360 ----------~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~~~l~~i~~~l~~~~~a~k 415 (426)
...+.--+.-+...|+|+-|+++-++|..+.|++-..|..|..++..+++++.|--
T Consensus 327 ~~~~~~~~~~~~LL~~Qa~FLl~K~~~elAL~~Ak~AV~~aPseF~tW~~La~vYi~l~d~e~ALL 392 (754)
T 4gns_B 327 ADSARLMNCMSDLLNIQTNFLLNRGDYELALGVSNTSTELALDSFESWYNLARCHIKKEEYEKALF 392 (754)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred cccccccCcchHHHHHHHHHHhccCcHHHHHHHHHHHHhcCchhhHHHHHHHHHHHHhccHHHHHH
Confidence 23455556777889999999999999999999999999999999999999998854
No 279
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=91.09 E-value=0.83 Score=46.74 Aligned_cols=82 Identities=11% Similarity=-0.032 Sum_probs=73.0
Q ss_pred HHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q psy6102 275 VIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILL 354 (426)
Q Consensus 275 ~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ 354 (426)
+-..+..+|....-...+..|..+|.+|+.+ .|.+...|..+|.+....++.-+|+-+|.++|.
T Consensus 151 ~hr~l~~LGDL~RY~~~~~~A~~~Y~~A~~~----------------~P~~G~~~nqLavla~~~~~~l~a~y~y~rsl~ 214 (497)
T 1ya0_A 151 CQHCLVHLGDIARYRNQTSQAESYYRHAAQL----------------VPSNGQPYNQLAILASSKGDHLTTIFYYCRSIA 214 (497)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----------------CTTBSHHHHHHHHHHHHTTCHHHHHHHHHHHHS
T ss_pred HHHHHHHcccHHHHHHHHHHHHHHHHHHHHh----------------CCCCCchHHHHHHHHhcccccHHHHHHHHHHHh
Confidence 3445677899988889999999999999999 999999999999999999999999999999998
Q ss_pred hCCCCHHHHHHHHHHHHH
Q psy6102 355 MEPNNVKALFRRGRAQVS 372 (426)
Q Consensus 355 ldp~~~kal~~lg~a~~~ 372 (426)
...-.+.|.-++...+..
T Consensus 215 ~~~Pf~~a~~nL~~~f~~ 232 (497)
T 1ya0_A 215 VKFPFPAASTNLQKALSK 232 (497)
T ss_dssp SSBCCHHHHHHHHHHHHH
T ss_pred cCCCChhHHHHHHHHHHH
Confidence 877788888888877754
No 280
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=89.98 E-value=2.2 Score=42.91 Aligned_cols=105 Identities=11% Similarity=0.003 Sum_probs=79.9
Q ss_pred HHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q psy6102 275 VIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILL 354 (426)
Q Consensus 275 ~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ 354 (426)
.+.....++..++..|+|.+|.........-....+. ...-..++......++..++|.+|...++++..
T Consensus 136 rarl~~~La~i~e~~g~~~eA~~iL~~l~~Et~~~~~----------~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~~ 205 (445)
T 4b4t_P 136 RARVTKDLVEIKKEEGKIDEAADILCELQVETYGSME----------MSEKIQFILEQMELSILKGDYSQATVLSRKILK 205 (445)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSSSC----------HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhccc----------HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 5666788999999999999999998887643211110 234467888899999999999999999998742
Q ss_pred ---hCCCC----HHHHHHHHHHHHHcCChHHHHHHHHHHHHh
Q psy6102 355 ---MEPNN----VKALFRRGRAQVSMNNFEQGLQDYEQALDL 389 (426)
Q Consensus 355 ---ldp~~----~kal~~lg~a~~~lg~~~~Al~~l~kAl~l 389 (426)
-.+.. ...+...|..+...++|.+|..+|..++..
T Consensus 206 ~~~~~~~~~~lk~~~~~~~~~~~~~e~~y~~a~~~y~e~~~~ 247 (445)
T 4b4t_P 206 KTFKNPKYESLKLEYYNLLVKISLHKREYLEVAQYLQEIYQT 247 (445)
T ss_dssp HHHHSSCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred hhcccCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 23333 345566788899999999999999988764
No 281
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=87.97 E-value=3.3 Score=43.74 Aligned_cols=47 Identities=19% Similarity=0.228 Sum_probs=30.1
Q ss_pred HHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHH
Q psy6102 335 VQLKFKAYKRAINLCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQA 386 (426)
Q Consensus 335 ~~~~lg~~~~Ai~~~~~AL~ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kA 386 (426)
..+++|++++|.+.++ ..++...|-.+|..+...++++.|..+|.++
T Consensus 661 ~~l~~~~~~~A~~~~~-----~~~~~~~W~~la~~al~~~~~~~A~~~y~~~ 707 (814)
T 3mkq_A 661 LALKVGQLTLARDLLT-----DESAEMKWRALGDASLQRFNFKLAIEAFTNA 707 (814)
T ss_dssp HHHHHTCHHHHHHHHT-----TCCCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hhhhcCCHHHHHHHHH-----hhCcHhHHHHHHHHHHHcCCHHHHHHHHHHc
Confidence 3455666666666542 2345667777777777777777777777665
No 282
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=87.18 E-value=4.3 Score=42.79 Aligned_cols=58 Identities=16% Similarity=0.143 Sum_probs=38.6
Q ss_pred cchHHHHHHHHHHHHHccCHHHHHHHHHHH--------HHhCCCCHHHHHHHHHHHHHcCChHHHH
Q psy6102 323 SYYTAALLNMAAVQLKFKAYKRAINLCDDI--------LLMEPNNVKALFRRGRAQVSMNNFEQGL 380 (426)
Q Consensus 323 p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~A--------L~ldp~~~kal~~lg~a~~~lg~~~~Al 380 (426)
..+...|.++|..+++.++++.|+++|.++ |.....+.+.+-.++......|++..|.
T Consensus 678 ~~~~~~W~~la~~al~~~~~~~A~~~y~~~~d~~~l~~l~~~~~~~~~~~~~~~~a~~~~~~~~A~ 743 (814)
T 3mkq_A 678 ESAEMKWRALGDASLQRFNFKLAIEAFTNAHDLESLFLLHSSFNNKEGLVTLAKDAETTGKFNLAF 743 (814)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHHTTCHHHHHHHHHHHHHTTCHHHHH
T ss_pred hCcHhHHHHHHHHHHHcCCHHHHHHHHHHccChhhhHHHHHHcCCHHHHHHHHHHHHHcCchHHHH
Confidence 345789999999999999999999999885 2222445555555544444443333333
No 283
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=86.16 E-value=1 Score=46.21 Aligned_cols=71 Identities=7% Similarity=0.036 Sum_probs=58.5
Q ss_pred chHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC--CC---HHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcH
Q psy6102 324 YYTAALLNMAAVQLKFKAYKRAINLCDDILLMEP--NN---VKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQ 394 (426)
Q Consensus 324 ~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ldp--~~---~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~ 394 (426)
....++..+=..|+..+.|++|.....++.-... .+ ...+|..|.++..+++|.+|.+++..|++..|.+.
T Consensus 229 ~qa~l~nllLRnYL~~~~y~qA~~lvsk~~fP~~~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rkap~~~ 304 (523)
T 4b4t_S 229 TKAMLINLILRDFLNNGEVDSASDFISKLEYPHTDVSSSLEARYFFYLSKINAIQLDYSTANEYIIAAIRKAPHNS 304 (523)
T ss_dssp HHHHHHHHHHHHHHHSSCSTTHHHHHHHHCSCTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTSSCSCSS
T ss_pred hhHHHHHHHHHHHHccCcHHHHHHHHhcCcCCcccCCHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCcch
Confidence 4466788888899999999999999998852211 11 56788899999999999999999999999888654
No 284
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=84.24 E-value=19 Score=31.50 Aligned_cols=90 Identities=11% Similarity=0.070 Sum_probs=68.3
Q ss_pred cchHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHH--------------
Q psy6102 323 SYYTAALLNMAAVQLKFKAYKRAINLCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALD-------------- 388 (426)
Q Consensus 323 p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~-------------- 388 (426)
|..+..-..++.+++-.|+|..|+-.+ ..-+...+.|..+.||..+.+|..|+.+++..++
T Consensus 30 ~~~~eY~lL~~I~LyyngEY~R~Lf~L-----~~lNT~Ts~YYk~LCy~klKdYkkA~~~le~il~~kvd~d~~~d~~~~ 104 (242)
T 3kae_A 30 PCKPEYRMLMSIVLYLNGEYTRALFHL-----HKLNTCTSKYYESLCYKKKKDYKKAIKSLESILEGKVERDPDVDARIQ 104 (242)
T ss_dssp ----CTHHHHHHHHHHTTCHHHHHHHH-----HTCCBHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSBCCCCCCHHHH
T ss_pred cCChHHHhhhhhhhhhcchHhHHHHHH-----HhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCcccccccc
Confidence 334455566778888999999988754 3446788899999999999999999999999993
Q ss_pred ---hCCCcHH-HHHHHHHHHHHHhhHHHHHHHH
Q psy6102 389 ---LLPNDQQ-ILKEIAFVRKQMRHHLNLEKMT 417 (426)
Q Consensus 389 ---l~P~n~~-a~~~l~~i~~~l~~~~~a~k~~ 417 (426)
.+|.+++ ....++.+..+.+..+++-+..
T Consensus 105 ~ffvd~~DkEfFy~l~a~lltq~g~r~EaI~y~ 137 (242)
T 3kae_A 105 EMFVDPGDEEFFESLLGDLCTLSGYREEGIGHY 137 (242)
T ss_dssp TTSCCTTCHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred eeeeccchHHHHHHHHHHHHHHhcCHHHhhhHh
Confidence 2466665 4556778888889888887643
No 285
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=83.57 E-value=9.1 Score=33.35 Aligned_cols=47 Identities=13% Similarity=0.133 Sum_probs=39.9
Q ss_pred HHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHH
Q psy6102 336 QLKFKAYKRAINLCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQAL 387 (426)
Q Consensus 336 ~~~lg~~~~Ai~~~~~AL~ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl 387 (426)
.+++|+++.|.+.++.. ++...|-++|.+.+..|+++-|..+|+++-
T Consensus 15 AL~lg~l~~A~e~a~~l-----~~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~ 61 (177)
T 3mkq_B 15 ALEYGNLDAALDEAKKL-----NDSITWERLIQEALAQGNASLAEMIYQTQH 61 (177)
T ss_dssp HHHTTCHHHHHHHHHHH-----CCHHHHHHHHHHHHHTTCHHHHHHHHHHTT
T ss_pred HHhcCCHHHHHHHHHHh-----CCHHHHHHHHHHHHHcCChHHHHHHHHHhC
Confidence 46789999999887654 678899999999999999999999998873
No 286
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=81.48 E-value=3.7 Score=31.12 Aligned_cols=37 Identities=22% Similarity=0.252 Sum_probs=31.4
Q ss_pred hhhHHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHh
Q psy6102 272 MEDVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKW 308 (426)
Q Consensus 272 ilk~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~ 308 (426)
....+..+...|...=+.|+|++|+.+|.+||+.+..
T Consensus 15 ~~~~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~l~~ 51 (83)
T 2w2u_A 15 LEEMARKYAINAVKADKEGNAEEAITNYKKAIEVLAQ 51 (83)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence 4456777888889999999999999999999998543
No 287
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=79.36 E-value=1.6 Score=49.16 Aligned_cols=106 Identities=10% Similarity=0.076 Sum_probs=76.9
Q ss_pred HHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccch-------hhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHH
Q psy6102 279 IKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQS-------KTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDD 351 (426)
Q Consensus 279 ~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~-------~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~ 351 (426)
.+-+|..++..|++++|..+|.+|-.-+........ ...........+..|......+.+.+.++.+++....
T Consensus 845 ~yl~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~YY~hv~~LFe~~~~~~~vi~fa~l 924 (1139)
T 4fhn_B 845 VYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEFSLL 924 (1139)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTTSCCSSHHHHHHHHHHHHHTSCCHHHHHHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHhhhhcccchhhhhhcccccccccccccccHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 478899999999999999999988543211111000 0111112334567888888899999999999999999
Q ss_pred HHHhCC-CCH----HHHHHHHHHHHHcCChHHHHHHHH
Q psy6102 352 ILLMEP-NNV----KALFRRGRAQVSMNNFEQGLQDYE 384 (426)
Q Consensus 352 AL~ldp-~~~----kal~~lg~a~~~lg~~~~Al~~l~ 384 (426)
||...+ ++. ..|.++=..+..+++|++|...+-
T Consensus 925 Ai~~~~~~~~~~~~~l~~~iFk~~L~l~~ye~Ay~aL~ 962 (1139)
T 4fhn_B 925 ADASKETDDEDLSIAITHETLKTACAAGKFDAAHVALM 962 (1139)
T ss_dssp HHHHCCSCCHHHHHHHHHHHHHHHHHHCCSGGGGHHHH
T ss_pred HHHhccCCChhhHHHHHHHHHHHHHhhCCHHHHHHHHH
Confidence 998764 332 267788888999999999987764
No 288
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=79.22 E-value=8.1 Score=33.65 Aligned_cols=31 Identities=13% Similarity=-0.010 Sum_probs=25.5
Q ss_pred HHHHHHhccchhhhhhhHHHHHHHHHHHHHH
Q psy6102 275 VIRTIKNSGNEYFKLNRMHDAQRKYKKAVRY 305 (426)
Q Consensus 275 ~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~ 305 (426)
....|+.+|..+...|+++-|..+|.++=+.
T Consensus 33 ~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D~ 63 (177)
T 3mkq_B 33 DSITWERLIQEALAQGNASLAEMIYQTQHSF 63 (177)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHTTCH
T ss_pred CHHHHHHHHHHHHHcCChHHHHHHHHHhCCH
Confidence 3557999999999999999999999876543
No 289
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=79.08 E-value=3.6 Score=40.95 Aligned_cols=97 Identities=10% Similarity=0.010 Sum_probs=71.6
Q ss_pred cchHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC---CCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhC--CCcHHHH
Q psy6102 323 SYYTAALLNMAAVQLKFKAYKRAINLCDDILLMEP---NNVKALFRRGRAQVSMNNFEQGLQDYEQALDLL--PNDQQIL 397 (426)
Q Consensus 323 p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ldp---~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~--P~n~~a~ 397 (426)
.....++..+|..|++.|++++|++.|.++..... .-.+.++..-.++...+++..|...+++|..+- ..++..+
T Consensus 128 ~e~~~~~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~~~~~d~~~~ 207 (429)
T 4b4t_R 128 LEQAQAWINLGEYYAQIGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIEKGGDWERR 207 (429)
T ss_dssp CCCSSCCHHHHHHHHHHCCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCCTHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhcCCCHHHH
Confidence 33455788999999999999999999999886543 347889999999999999999999999997762 3344443
Q ss_pred HHHHH----HHHHHhhHHHHHHHHHH
Q psy6102 398 KEIAF----VRKQMRHHLNLEKMTYA 419 (426)
Q Consensus 398 ~~l~~----i~~~l~~~~~a~k~~~~ 419 (426)
..+.. ++...+++.++.+..+.
T Consensus 208 ~~lk~~~gl~~l~~r~f~~Aa~~f~e 233 (429)
T 4b4t_R 208 NRYKTYYGIHCLAVRNFKEAAKLLVD 233 (429)
T ss_dssp HHHHHHHHHGGGGTSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhChHHHHHHHHHH
Confidence 33333 33345667777665444
No 290
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=79.00 E-value=4.9 Score=30.40 Aligned_cols=36 Identities=28% Similarity=0.264 Sum_probs=30.4
Q ss_pred hhHHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHh
Q psy6102 273 EDVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKW 308 (426)
Q Consensus 273 lk~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~ 308 (426)
...+..+...|...=+.|+|++|+.+|.+||+++-.
T Consensus 8 ~~~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~l~~ 43 (83)
T 2v6y_A 8 EDMARKYAILAVKADKEGKVEDAITYYKKAIEVLSQ 43 (83)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence 446677888888889999999999999999998543
No 291
>3mv2_A Coatomer subunit alpha; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_A
Probab=76.84 E-value=7.5 Score=37.18 Aligned_cols=122 Identities=14% Similarity=0.143 Sum_probs=71.4
Q ss_pred HHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHH-HHHHHc-------cCHHHHH
Q psy6102 275 VIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMA-AVQLKF-------KAYKRAI 346 (426)
Q Consensus 275 ~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA-~~~~~l-------g~~~~Ai 346 (426)
......+.|..++..|++++|+..|..+|..+.-..... .++..+... ...+..... .+.+++ .+....+
T Consensus 113 ~L~~~Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~l~~v~~-~~e~~e~~e-li~icrEYilal~iEl~Rr~l~~~~~kR~l 190 (325)
T 3mv2_A 113 VVNEKMNEGYKNFKLNKPDIAIECFREAIYRITLLMVDD-AEDEKLAHK-ILETAREYILGLSIELERRSLKEGNTVRML 190 (325)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCCBCS-SHHHHHHHH-HHHHHHHHHHHHHHHHHHHTCCTTCHHHHH
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhheeeecc-HHHHHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccHHHHH
Confidence 344467789999999999999999999999865332211 111111111 122211111 111122 1112222
Q ss_pred H--HHHHHHHhCCCCHHHHHHHHHH-HHHcCChHHHHHHHHHHHHhCCCcHHHHH
Q psy6102 347 N--LCDDILLMEPNNVKALFRRGRA-QVSMNNFEQGLQDYEQALDLLPNDQQILK 398 (426)
Q Consensus 347 ~--~~~~AL~ldp~~~kal~~lg~a-~~~lg~~~~Al~~l~kAl~l~P~n~~a~~ 398 (426)
+ .|=.-.+|.|.+--.-++.|+. .++.++|.-|....++.|++.|..+.+..
T Consensus 191 ELAAYFT~c~LQp~H~~LaLr~AM~~a~K~KNy~tAa~fArrLLel~p~~~~a~q 245 (325)
T 3mv2_A 191 ELAAYFTKAKLSPIHRTNALQVAMSQHFKHKNFLQASYFAGEFLKIISSGPRAEQ 245 (325)
T ss_dssp HHHHHGGGSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSHHHHH
T ss_pred HHHHHhccCCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCHHHHHH
Confidence 2 1111234566666666667775 57889999999999999999997654443
No 292
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=75.11 E-value=25 Score=34.99 Aligned_cols=95 Identities=6% Similarity=0.077 Sum_probs=67.8
Q ss_pred chHHHHHHHHHHHHHccCHHHHHHHHHHHHHh----CCC--CHHHHHHHHHHHHHcCChHHHHHHHHHHHH---hCCCcH
Q psy6102 324 YYTAALLNMAAVQLKFKAYKRAINLCDDILLM----EPN--NVKALFRRGRAQVSMNNFEQGLQDYEQALD---LLPNDQ 394 (426)
Q Consensus 324 ~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~l----dp~--~~kal~~lg~a~~~lg~~~~Al~~l~kAl~---l~P~n~ 394 (426)
....+...+|..|...|++.+|...+.....- ++. -.+.+.....++...+++..|...++++.. -.+.++
T Consensus 135 erarl~~~La~i~e~~g~~~eA~~iL~~l~~Et~~~~~~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~~~~~~~~~~~ 214 (445)
T 4b4t_P 135 ERARVTKDLVEIKKEEGKIDEAADILCELQVETYGSMEMSEKIQFILEQMELSILKGDYSQATVLSRKILKKTFKNPKYE 214 (445)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSSCCH
T ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhcccCCcH
Confidence 35678889999999999999999999887631 221 256788888899999999999999999743 344555
Q ss_pred HH----HHHHHHHHHHHhhHHHHHHHHH
Q psy6102 395 QI----LKEIAFVRKQMRHHLNLEKMTY 418 (426)
Q Consensus 395 ~a----~~~l~~i~~~l~~~~~a~k~~~ 418 (426)
.. ....+.++...+++.++.+..+
T Consensus 215 ~lk~~~~~~~~~~~~~e~~y~~a~~~y~ 242 (445)
T 4b4t_P 215 SLKLEYYNLLVKISLHKREYLEVAQYLQ 242 (445)
T ss_dssp HHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 43 3444455555566666655433
No 293
>3r9m_A BRO1 domain-containing protein BROX; protein binding; 1.95A {Homo sapiens} PDB: 3um3_A 3zxp_A 3um2_A 3um1_A 3uly_A 3um0_A
Probab=72.89 E-value=31 Score=33.57 Aligned_cols=99 Identities=13% Similarity=0.151 Sum_probs=61.8
Q ss_pred hHHHHHHHHHHHHHHHHhhcccchh------hhhhhcCcchHHHHHHHHHHHHHccCHHH-----------------HHH
Q psy6102 291 RMHDAQRKYKKAVRYIKWYNQSQSK------TQQKHFRSYYTAALLNMAAVQLKFKAYKR-----------------AIN 347 (426)
Q Consensus 291 ~y~~Ai~~y~kAl~~~~~~~~~~~~------~~~~~~~p~~~~~~~nlA~~~~~lg~~~~-----------------Ai~ 347 (426)
..+.|..+|++|--++......... ....++.+....++..+..+.-+.--+.+ +.+
T Consensus 141 ~lK~A~~~fq~AAG~f~~l~~~~~~~~~~~~~~~~Dls~~~l~~L~~l~LAQAQE~~~~Kai~~~~k~~liAKLa~q~~~ 220 (376)
T 3r9m_A 141 EAKEVHRSLKIAAGIFKHLKESHLPKLITPAEKGRDLESRLIEAYVIQCQAEAQEVTIARAIELKHAPGLIAALAYETAN 220 (376)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTGGGCSSCCCTTSTTSHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCcccCHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Confidence 4788999999998877655432111 13345566666677666555433222222 233
Q ss_pred HHHHHHHh-CCCC-------------------HHHHHHHHHHHHHcCChHHHHHHHHHHHHh
Q psy6102 348 LCDDILLM-EPNN-------------------VKALFRRGRAQVSMNNFEQGLQDYEQALDL 389 (426)
Q Consensus 348 ~~~~AL~l-dp~~-------------------~kal~~lg~a~~~lg~~~~Al~~l~kAl~l 389 (426)
.|++|... .... +.++|..|..+...+++.+|+..|+.|.+.
T Consensus 221 ~Y~~a~~~l~~~~~~i~~~W~~~v~~K~~~~~A~A~y~~a~~~~~~~k~GeaIa~L~~A~~~ 282 (376)
T 3r9m_A 221 FYQKADHTLSSLEPAYSAKWRKYLHLKMCFYTAYAYCYHGETLLASDKCGEAIRSLQEAEKL 282 (376)
T ss_dssp HHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHH
Confidence 55555542 2111 557788888888899999999999888664
No 294
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=72.53 E-value=4.9 Score=32.55 Aligned_cols=36 Identities=17% Similarity=0.176 Sum_probs=30.6
Q ss_pred hhhHHHHHHhccchhhhhhhHHHHHHHHHHHHHHHH
Q psy6102 272 MEDVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIK 307 (426)
Q Consensus 272 ilk~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~ 307 (426)
.+..+..+...|...=..++|++|+.+|.+|++++-
T Consensus 14 ~l~kAi~lv~~Ave~D~ag~y~eAl~lY~~Aie~l~ 49 (117)
T 2cpt_A 14 NLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFL 49 (117)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHH
Confidence 455777788888888899999999999999999853
No 295
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=72.48 E-value=12 Score=39.14 Aligned_cols=58 Identities=3% Similarity=-0.052 Sum_probs=46.9
Q ss_pred HHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHH
Q psy6102 331 NMAAVQLKFKAYKRAINLCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALD 388 (426)
Q Consensus 331 nlA~~~~~lg~~~~Ai~~~~~AL~ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~ 388 (426)
.++...++.+++..|...+...-.-........|.+|.++..+|+.++|...|+++..
T Consensus 290 ~~~r~Alr~~d~~~a~~~~~~l~~~~~~~~r~~YW~~ra~~~~g~~~~a~~~~~~~a~ 347 (618)
T 1qsa_A 290 RRVRMALGTGDRRGLNTWLARLPMEAKEKDEWRYWQADLLLERGREAEAKEILHQLMQ 347 (618)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHSCTTGGGSHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHCCCHHHHHHHHHHccccccccHhHHHHHHHHHHHcCCHHHHHHHHHHHhc
Confidence 3444456789999999988665443346789999999999999999999999998865
No 296
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=72.45 E-value=7.2 Score=29.42 Aligned_cols=36 Identities=8% Similarity=0.090 Sum_probs=29.9
Q ss_pred hhhHHHHHHhccchhhhhhhHHHHHHHHHHHHHHHH
Q psy6102 272 MEDVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIK 307 (426)
Q Consensus 272 ilk~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~ 307 (426)
.+..+..+...|...-..|+|++|+.+|.+|++++-
T Consensus 9 ~l~~A~~l~~~Av~~D~~g~y~eAl~~Y~~aie~l~ 44 (85)
T 2v6x_A 9 FLTKGIELVQKAIDLDTATQYEEAYTAYYNGLDYLM 44 (85)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 445667777888888889999999999999999753
No 297
>3mkr_B Coatomer subunit alpha; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=72.12 E-value=21 Score=34.03 Aligned_cols=118 Identities=10% Similarity=0.166 Sum_probs=70.1
Q ss_pred HHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHH-HHHHHc--cC-----HHHHHH
Q psy6102 276 IRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMA-AVQLKF--KA-----YKRAIN 347 (426)
Q Consensus 276 a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA-~~~~~l--g~-----~~~Ai~ 347 (426)
.......|..++..|++.+|+..|..+|..+.-.... ..++..+... ...+..... .+.+++ .+ .++...
T Consensus 102 l~~~Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~l~~v~-~~~e~~e~~e-li~icreYilal~iEl~Rr~l~~~~~~~~kR 179 (320)
T 3mkr_B 102 LIQRLQLCYQLTTVGKFEEAVEKFRSILLSVPLLVVD-NKQEIAEAQQ-LITICREYIVGLSMETERKKLPKETLEQQKR 179 (320)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHGGGCCCC-SHHHHHHHHH-HHHHHHHHHHHHHHHHHHTTSCCCSHHHHHH
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhheeec-cHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhcccCCchhHHH
Confidence 3446788999999999999999999999986433211 1111111111 122211111 112222 11 122222
Q ss_pred HHHHH-----HHhCCCCHHHHHHHHHH-HHHcCChHHHHHHHHHHHHhCCCcHH
Q psy6102 348 LCDDI-----LLMEPNNVKALFRRGRA-QVSMNNFEQGLQDYEQALDLLPNDQQ 395 (426)
Q Consensus 348 ~~~~A-----L~ldp~~~kal~~lg~a-~~~lg~~~~Al~~l~kAl~l~P~n~~ 395 (426)
.++.| .+|.|.|--.-++.|+. .++.++|.-|..+-++.|++.|..+.
T Consensus 180 ~lELAAYFT~c~Lqp~H~~LaLr~AM~~a~K~KNy~tAa~fArrLLel~p~~~~ 233 (320)
T 3mkr_B 180 ICEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFRTAAAFARRLLELGPKPEV 233 (320)
T ss_dssp HHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHTTBHHHHHHHHHHHHHTCCCHHH
T ss_pred HHHHHHHhccCCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCHHH
Confidence 22222 34567776666777775 57889999999999999999987443
No 298
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=71.69 E-value=7.3 Score=30.09 Aligned_cols=36 Identities=11% Similarity=0.086 Sum_probs=30.0
Q ss_pred hhHHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHh
Q psy6102 273 EDVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKW 308 (426)
Q Consensus 273 lk~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~ 308 (426)
+..+..+...|...-..++|++|+.+|.+|++++-.
T Consensus 12 l~~Ai~lv~~Ave~D~~g~y~eAl~~Y~~Aie~l~~ 47 (93)
T 1wfd_A 12 STAAVAVLKRAVELDAESRYQQALVCYQEGIDMLLQ 47 (93)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 346677788888888999999999999999998543
No 299
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=71.49 E-value=7.2 Score=29.70 Aligned_cols=33 Identities=15% Similarity=0.135 Sum_probs=27.4
Q ss_pred HHHHHHhccchhhhhhhHHHHHHHHHHHHHHHH
Q psy6102 275 VIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIK 307 (426)
Q Consensus 275 ~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~ 307 (426)
.+..+...|..+-..|+|++|+.+|.+||+++-
T Consensus 15 ~A~~lv~~Ave~D~~g~y~eAl~lY~~Aie~ll 47 (86)
T 4a5x_A 15 AAATVLKRAVELDSESRYPQALVCYQEGIDLLL 47 (86)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 455667777777889999999999999999853
No 300
>3kop_A Uncharacterized protein; protein with A cyclophilin-like fold, structural genomics, J center for structural genomics, JCSG; 1.90A {Arthrobacter SP}
Probab=70.64 E-value=4.8 Score=35.06 Aligned_cols=53 Identities=11% Similarity=0.196 Sum_probs=38.2
Q ss_pred EEEEEEECCeeeee-EEEEecCCCChHHHHHHHHhhhCCCCCCCCCccccccCCccccccccc--EEeeCc
Q psy6102 13 VFLDVSIGEEKVGR-MVIELFKHIVPKTAENFRALCTGEYGKGKLGKALHFTGSHFHRIIPQF--MIQGGD 80 (426)
Q Consensus 13 ~~~~~~~~~~~~G~-i~~~l~~~~~P~~~~nf~~l~~~~~~~~~~~k~~~y~~~~f~rv~~~~--~iq~G~ 80 (426)
=|+.|++... |- ++.+|..+.||+||+.|.++-- |.+..+|-...+- ++--|+
T Consensus 22 r~i~itl~~~--g~~~~A~Lldd~APkTcaA~~~~LP-------------~~~~viHarwSGeeVy~~lp~ 77 (188)
T 3kop_A 22 RYINITLEKR--GVTCKALLLDDVAPRTSKAVWDALP-------------QSSQVFHGKYARNEIYNLVPA 77 (188)
T ss_dssp CEEEEEETTT--TEEEEEEECTTTSHHHHHHHHHHCC-------------EEEECEECSSSSSEEEEEEEC
T ss_pred eEEEEEEecC--CeEEEEEEccccChHHHHHHHHhCC-------------CCcceEEEEEecceEEEECCc
Confidence 4677887542 43 7899999999999999999663 7777777766553 443343
No 301
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=68.65 E-value=27 Score=29.41 Aligned_cols=130 Identities=12% Similarity=0.009 Sum_probs=76.0
Q ss_pred ccceechhhccccHHHHHhhchhhC--Ccc----cccchhhhHHHHHHhccch--hhhhhhHHHHHHHHHHHHHHHHhhc
Q psy6102 239 KNGIFGCVRQGFGVAREVSYVEAEN--DKP----LVLNQMEDVIRTIKNSGNE--YFKLNRMHDAQRKYKKAVRYIKWYN 310 (426)
Q Consensus 239 ~~~vFG~VieGldvl~~I~~l~~~~--~~P----~~~i~ilk~a~~~~~~G~~--~f~~g~y~~Ai~~y~kAl~~~~~~~ 310 (426)
....=|-|.+|.+++.+........ .+- .......-..+.+-..|.. .-..++...-+.+|-+.=.
T Consensus 16 ~~ildG~v~qGveii~k~~~ssni~E~NW~ICNiiD~a~C~y~v~vLd~IGkiFDis~C~NlKrVi~C~~~~n~------ 89 (172)
T 1wy6_A 16 KFLLDGYIDEGVKIVLEITKSSTKSEYNWFICNLLESIDCRYMFQVLDKIGSYFDLDKCQNLKSVVECGVINNT------ 89 (172)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHSCHHHHTHHHHHHHHHCCHHHHHHHHHHHGGGSCGGGCSCTHHHHHHHHHTTC------
T ss_pred HHHHhhhHHHHHHHHHHHcCCCCccccceeeeecchhhchhHHHHHHHHHhhhcCcHhhhcHHHHHHHHHHhcc------
Confidence 4556677777777777665544311 110 0111111233444444543 2345566666666643321
Q ss_pred ccchhhhhhhcCcchHHHHHHHHHHHH-HccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHh
Q psy6102 311 QSQSKTQQKHFRSYYTAALLNMAAVQL-KFKAYKRAINLCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDL 389 (426)
Q Consensus 311 ~~~~~~~~~~~~p~~~~~~~nlA~~~~-~lg~~~~Ai~~~~~AL~ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l 389 (426)
.. =|.++|.-++ ..|.-++--+.+...+.-++-++..++.+|.+|..+|+..+|-+.+.+|.+-
T Consensus 90 -----------~s----e~vd~ALd~lv~~~KkDqLdki~~~~l~n~~~~~~~l~kia~Ay~Klg~~r~a~eLl~~AC~k 154 (172)
T 1wy6_A 90 -----------LN----EHVNKALDILVIQGKRDKLEEIGREILKNNEVSASILVAIANALRRVGDERDATTLLIEACKK 154 (172)
T ss_dssp -----------CC----HHHHHHHHHHHHTTCHHHHHHHHHHHC--CCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred -----------hH----HHHHHHHHHHHHhccHhHHHHHHHHHhccCCCChHHHHHHHHHHHHhcchhhHHHHHHHHHHh
Confidence 11 2344454443 5666666666666666666778999999999999999999999999998765
No 302
>3rau_A Tyrosine-protein phosphatase non-receptor type 23; BRO1 domain, hydrolase; 1.95A {Homo sapiens}
Probab=68.30 E-value=29 Score=33.61 Aligned_cols=116 Identities=12% Similarity=0.109 Sum_probs=67.7
Q ss_pred hHHHHHHhccchhhhhh---------hHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHH
Q psy6102 274 DVIRTIKNSGNEYFKLN---------RMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKR 344 (426)
Q Consensus 274 k~a~~~~~~G~~~f~~g---------~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~ 344 (426)
+.+..++++|..+.+.+ ..+.|..+|++|.-++.............++.+....++..+..+.-+.--+.+
T Consensus 115 E~a~VLfNiaal~s~~a~~~~r~~~~glK~A~~~fq~AAG~f~~l~~~~~~~~~~Dls~~~l~~L~~l~LAQAQE~~~~K 194 (363)
T 3rau_A 115 EQACILYNLGALHSMLGAMDKRVSEEGMKVSCTHFQCAAGAFAYLREHFPQAYSVDMSRQILTLNVNLMLGQAQECLLEK 194 (363)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHHHHHHHHHCCSCSSGGGSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555666666664433 578899999999887765544322222334555566666666554443322222
Q ss_pred HH-----------------HHHHHHHHhCCC-------------------------CHHHHHHHHHHHHHcCChHHHHHH
Q psy6102 345 AI-----------------NLCDDILLMEPN-------------------------NVKALFRRGRAQVSMNNFEQGLQD 382 (426)
Q Consensus 345 Ai-----------------~~~~~AL~ldp~-------------------------~~kal~~lg~a~~~lg~~~~Al~~ 382 (426)
|+ +.|++|.+.-.. .+.|+|..|......+++.+|+..
T Consensus 195 ai~~~~k~~liAkLa~q~~~~Y~~a~~~l~~~~~~~~~~~~~~~w~~~v~~K~~~~~A~A~y~~a~~~~e~~k~GeaIa~ 274 (363)
T 3rau_A 195 SMLDNRKSFLVARISAQVVDYYKEACRALENPDTASLLGRIQKDWKKLVQMKIYYFAAVAHLHMGKQAEEQQKFGERVAY 274 (363)
T ss_dssp HHHTTCCHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHhcCCchhHHHHHHHHHHHHHHHHHHHHhcCccccccccccHHHHHHHHHHHHHHHHHHHHHHHHhHHHhhhHHHHHHH
Confidence 22 244444322110 134677788888888999999988
Q ss_pred HHHHHHh
Q psy6102 383 YEQALDL 389 (426)
Q Consensus 383 l~kAl~l 389 (426)
++.|...
T Consensus 275 L~~A~~~ 281 (363)
T 3rau_A 275 FQSALDK 281 (363)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8777653
No 303
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=67.40 E-value=12 Score=42.04 Aligned_cols=92 Identities=13% Similarity=-0.040 Sum_probs=66.8
Q ss_pred CcchHHHHHHHHHHHHHccCHHHHHHHHHHHHH---h--------------------CCCCHHHHHHHHHHHHHcCChHH
Q psy6102 322 RSYYTAALLNMAAVQLKFKAYKRAINLCDDILL---M--------------------EPNNVKALFRRGRAQVSMNNFEQ 378 (426)
Q Consensus 322 ~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~---l--------------------dp~~~kal~~lg~a~~~lg~~~~ 378 (426)
.+.++...+.+|.+++..|++++|.+++.+|-. . ....+..|+.....+...+.++.
T Consensus 838 ~~~~~~~~yl~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~YY~hv~~LFe~~~~~~~ 917 (1139)
T 4fhn_B 838 LNSDPIAVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYID 917 (1139)
T ss_dssp SCCCHHHHHHHHHHHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTTSCCSSHHHHHHHHHHHHHTSCCHH
T ss_pred ccCCcHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhcccchhhhhhcccccccccccccccHHHHHHHHHHHHHHcCCHHH
Confidence 455666778999999999999999999988621 1 11124566777778889999999
Q ss_pred HHHHHHHHHHhCC-CcHH----HHHHHHHHHHHHhhHHHH
Q psy6102 379 GLQDYEQALDLLP-NDQQ----ILKEIAFVRKQMRHHLNL 413 (426)
Q Consensus 379 Al~~l~kAl~l~P-~n~~----a~~~l~~i~~~l~~~~~a 413 (426)
+++.-+.|++..+ ++.. .+..+=.....++++++|
T Consensus 918 vi~fa~lAi~~~~~~~~~~~~~l~~~iFk~~L~l~~ye~A 957 (1139)
T 4fhn_B 918 ALEFSLLADASKETDDEDLSIAITHETLKTACAAGKFDAA 957 (1139)
T ss_dssp HHHHHHHHHHHCCSCCHHHHHHHHHHHHHHHHHHCCSGGG
T ss_pred HHHHHHHHHHhccCCChhhHHHHHHHHHHHHHhhCCHHHH
Confidence 9999999999765 4443 344455555666666654
No 304
>3esl_A Checkpoint serine/threonine-protein kinase BUB1; mitotic spindle checkpoint, TPR motif, all-alpha domain, MAD3-like domain; HET: NHE; 1.74A {Saccharomyces cerevisiae}
Probab=65.50 E-value=48 Score=29.34 Aligned_cols=86 Identities=6% Similarity=-0.062 Sum_probs=62.9
Q ss_pred HHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC--CCCHHHHHHHHHHHHHcC
Q psy6102 297 RKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLME--PNNVKALFRRGRAQVSMN 374 (426)
Q Consensus 297 ~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ld--p~~~kal~~lg~a~~~lg 374 (426)
..+.+|+...... +...-+|.+..+|...+.++ ..+...++...|....... -..+..|-.-|..+...|
T Consensus 58 ~lLErc~~~F~~~-------~rYkND~RYLklWl~Ya~~~-~~~~~~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g 129 (202)
T 3esl_A 58 STMERCLIYIQDM-------ETYRNDPRFLKIWIWYINLF-LSNNFHESENTFKYMFNKGIGTKLSLFYEEFSKLLENAQ 129 (202)
T ss_dssp HHHHHHHHHHTTC-------GGGTTCHHHHHHHHHHHHHH-STTCHHHHHHHHHHHHHHTSSTTBHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhccc-------ccccCCHHHHHHHHHHHHhh-cccccCCHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcC
Confidence 4667777654321 22233889999999888776 2344668888887776554 466777777788899999
Q ss_pred ChHHHHHHHHHHHHhC
Q psy6102 375 NFEQGLQDYEQALDLL 390 (426)
Q Consensus 375 ~~~~Al~~l~kAl~l~ 390 (426)
++.+|.+.|+.+++..
T Consensus 130 ~~~~A~~Vy~~GI~~~ 145 (202)
T 3esl_A 130 FFLEAKVLLELGAENN 145 (202)
T ss_dssp CHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHcC
Confidence 9999999999999875
No 305
>2nnz_A Hypothetical protein; beta-barrel, structural genomics, ontario centre for structu proteomics, OCSP, unknown function; NMR {Archaeoglobus fulgidus}
Probab=64.35 E-value=6.4 Score=33.49 Aligned_cols=32 Identities=16% Similarity=0.294 Sum_probs=26.4
Q ss_pred EEEEEEECCeeeeeEEEEecCCCChHHHHHHHHhh
Q psy6102 13 VFLDVSIGEEKVGRMVIELFKHIVPKTAENFRALC 47 (426)
Q Consensus 13 ~~~~~~~~~~~~G~i~~~l~~~~~P~~~~nf~~l~ 47 (426)
..+.+++++ ..++++|+++.||+||.-|+++-
T Consensus 30 ~~I~i~~~~---~~~~a~L~D~~aP~Ta~~f~~~L 61 (153)
T 2nnz_A 30 MRLRIRFES---AECEVELYEEWAPETVRAIADAL 61 (153)
T ss_dssp CCEEEEETT---EEEEECCCTTSCHHHHHHHHHTC
T ss_pred eEEEEEECC---EEEEEEEcCCCCHHHHHHHHHhC
Confidence 345556665 67999999999999999999976
No 306
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=63.69 E-value=40 Score=32.35 Aligned_cols=108 Identities=13% Similarity=0.035 Sum_probs=55.9
Q ss_pred HHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccch----------hhhhhhcCcchHHHHHHHHHHHHHccC---
Q psy6102 275 VIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQS----------KTQQKHFRSYYTAALLNMAAVQLKFKA--- 341 (426)
Q Consensus 275 ~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~----------~~~~~~~~p~~~~~~~nlA~~~~~lg~--- 341 (426)
.-+.++.+.+-|.++++|++|++........+-....... .-..... +.+....-.+..++.....
T Consensus 34 AHQ~~RTi~~Ry~~~k~y~eAidLL~~GA~~ll~~~Q~~sg~DL~~llvevy~~~~~-~~~~~~~~rL~~L~~~~~~~~p 112 (336)
T 3lpz_A 34 AAQETRLVAARYSKQGNWAAAVDILASVSQTLLRSGQGGSGGDLAVLLVDTFRQAGQ-RVDGASRGKLLGCLRLFQPGEP 112 (336)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTC-CCCHHHHHHHHHHHTTSCTTCH
T ss_pred HHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHHHcCC-CCCHHHHHHHHHHHHhCCCCCc
Confidence 4455666667777777777777764443333222111100 0001111 1222333344444433332
Q ss_pred -----HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHH
Q psy6102 342 -----YKRAINLCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDY 383 (426)
Q Consensus 342 -----~~~Ai~~~~~AL~ldp~~~kal~~lg~a~~~lg~~~~Al~~l 383 (426)
..+|+.+..+.=...-.+++.+..+|..|+..+++.+|..+|
T Consensus 113 ~r~~fi~~ai~WS~~~g~~~~Gdp~LH~~ig~~~~~e~~~~~Ae~H~ 159 (336)
T 3lpz_A 113 VRKRFVKEMIDWSKKFGDYPAGDPELHHVVGTLYVEEGEFEAAEKHL 159 (336)
T ss_dssp HHHHHHHHHHHHHHHHSSCTTCCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHccCCHHHHHHHH
Confidence 223344433311112357889999999999999999998877
No 307
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=63.17 E-value=21 Score=26.31 Aligned_cols=39 Identities=18% Similarity=0.395 Sum_probs=28.9
Q ss_pred HHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHH
Q psy6102 364 FRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAF 402 (426)
Q Consensus 364 ~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~~~l~~ 402 (426)
..+|..+...|++++|+.+|-+|+...|.-.+...-+..
T Consensus 21 V~~GE~L~~~g~~~~~~~hf~nAl~Vc~qP~~LL~i~q~ 59 (73)
T 3ax2_A 21 IQLGEELLAQGDYEKGVDHLTNAIAVCGQPQQLLQVLQQ 59 (73)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTCSSCHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHcCCHHHHHHHHHh
Confidence 357788888888888888888888888876665554443
No 308
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=62.61 E-value=51 Score=25.39 Aligned_cols=28 Identities=18% Similarity=0.059 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHH
Q psy6102 326 TAALLNMAAVQLKFKAYKRAINLCDDIL 353 (426)
Q Consensus 326 ~~~~~nlA~~~~~lg~~~~Ai~~~~~AL 353 (426)
+..+..+|..+++.|+|++||++..+|.
T Consensus 15 AH~~~RrAe~ll~~gkydeAIech~kAa 42 (97)
T 2crb_A 15 AHQQSRRADRLLAAGKYEEAISCHRKAT 42 (97)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hhHhhhHHHHHHhcCCHHHHHHHHHHHH
Confidence 4566666667777777777777665554
No 309
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=62.14 E-value=17 Score=36.56 Aligned_cols=102 Identities=7% Similarity=0.032 Sum_probs=65.4
Q ss_pred hhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcch----HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC------
Q psy6102 288 KLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYY----TAALLNMAAVQLKFKAYKRAINLCDDILLMEP------ 357 (426)
Q Consensus 288 ~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~----~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ldp------ 357 (426)
+....++|.....++...+-..... +..+-.|.. .-+..++-.+|+++++..-|...++..-...+
T Consensus 138 ~~~~le~~a~~i~k~F~~cl~Dr~~----~~~~s~p~kk~~~l~l~n~L~kiYFkl~~~~lckni~k~i~~~~~~p~~~~ 213 (455)
T 3t5v_B 138 SHQFLSHISSILSRLFNSIKPPRGN----ASSTNIPGKQRILLYLVNKLNNIYFRIESPQLCSNIFKNFQPKSMLAHFNE 213 (455)
T ss_dssp TTHHHHHHHHHHHHHHHHCCCC--------CCSSCCHHHHHHHHHHHHHHHHHHHSSCCTTHHHHHHTHHHHCCCSCGGG
T ss_pred chhHHHHHHHHHHHHHHHhcccCCC----cccccccccchhHHHHHHHHHHHHHHcCCHHHHHHHHHHhccCCCCcChhh
Confidence 3556777777777777763211100 000000111 22344556788999999888887744322221
Q ss_pred ----CCHHHHHHHHHHHHHcCChHHHHHHHHHHHHh-CCCc
Q psy6102 358 ----NNVKALFRRGRAQVSMNNFEQGLQDYEQALDL-LPND 393 (426)
Q Consensus 358 ----~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l-~P~n 393 (426)
.-+..+|.+|..++..++|.+|.+++..|++. .|.+
T Consensus 214 ~p~~q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~lcp~~ 254 (455)
T 3t5v_B 214 YQLDQQIEYRYLLGRYYLLNSQVHNAFVQFNEAFQSLLNLP 254 (455)
T ss_dssp SCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCC
T ss_pred CCccceEeeeHHHHHHHHHHccHHHHHHHHHHHHHhcCCcc
Confidence 12567899999999999999999999999998 7765
No 310
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=61.99 E-value=13 Score=39.29 Aligned_cols=54 Identities=11% Similarity=0.107 Sum_probs=45.9
Q ss_pred CHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhhHHH
Q psy6102 359 NVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLN 412 (426)
Q Consensus 359 ~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~~~l~~i~~~l~~~~~ 412 (426)
-.++...+|+..+..|+|.-|.+....++..+|+|.+++..++.++.+++...+
T Consensus 448 g~~~~~~~a~~~~~~g~~~wa~~l~~~~~~~~p~~~~a~~l~a~~~~~l~~~~~ 501 (658)
T 2cfu_A 448 GAERLLEQARASYARGEYRWVVEVVNRLVFAEPDNRAARELQADALEQLGYQAE 501 (658)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHCS
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhcc
Confidence 355678888888899999999999999999999999999999999988886653
No 311
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=61.11 E-value=73 Score=35.52 Aligned_cols=102 Identities=6% Similarity=-0.155 Sum_probs=78.9
Q ss_pred HHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q psy6102 275 VIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILL 354 (426)
Q Consensus 275 ~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ 354 (426)
.-..+..+-+.|++.|+.++|...+.+.-+.... . -.-+...|+.+-..|.+.|+.++|++.+++-.+
T Consensus 126 ~~~TynaLIdglcK~G~leeA~~Lf~eM~~m~~k-----------G-~~PdvvTYNtLI~Glck~G~~~eA~~Lf~eM~~ 193 (1134)
T 3spa_A 126 QQQRLLAFFKCCLLTDQLPLAHHLLVVHHGQRQK-----------R-KLLTLDMYNAVMLGWARQGAFKELVYVLFMVKD 193 (1134)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHSHHH-----------H-TTCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhc-----------C-CCCCHhHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 4456888889999999999999999765433110 0 234577889999999999999999999988875
Q ss_pred h--CCCCHHHHHHHHHHHHHcCCh-HHHHHHHHHHHHh
Q psy6102 355 M--EPNNVKALFRRGRAQVSMNNF-EQGLQDYEQALDL 389 (426)
Q Consensus 355 l--dp~~~kal~~lg~a~~~lg~~-~~Al~~l~kAl~l 389 (426)
. .| +.-.|..+-.++...|+. ++|.+.|++..+.
T Consensus 194 ~G~~P-DvvTYntLI~glcK~G~~~e~A~~Ll~EM~~k 230 (1134)
T 3spa_A 194 AGLTP-DLLSYAAALQCMGRQDQDAGTIERCLEQMSQE 230 (1134)
T ss_dssp TTCCC-CHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHH
T ss_pred cCCCC-cHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHc
Confidence 4 35 666777777788888885 7888999888774
No 312
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=61.05 E-value=70 Score=35.67 Aligned_cols=98 Identities=10% Similarity=-0.098 Sum_probs=71.6
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHh----CCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHh--CCCcHHHHHH
Q psy6102 326 TAALLNMAAVQLKFKAYKRAINLCDDILLM----EPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDL--LPNDQQILKE 399 (426)
Q Consensus 326 ~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~l----dp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l--~P~n~~a~~~ 399 (426)
-..|..+-.+|.+.|+.++|.+.+.+.-++ -.-+...|..+-..|...|+.++|++.|++..+. .|+ ......
T Consensus 127 ~~TynaLIdglcK~G~leeA~~Lf~eM~~m~~kG~~PdvvTYNtLI~Glck~G~~~eA~~Lf~eM~~~G~~PD-vvTYnt 205 (1134)
T 3spa_A 127 QQRLLAFFKCCLLTDQLPLAHHLLVVHHGQRQKRKLLTLDMYNAVMLGWARQGAFKELVYVLFMVKDAGLTPD-LLSYAA 205 (1134)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHSHHHHTTCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCC-HHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhcCCCCCHhHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCc-HHHHHH
Confidence 346777788999999999999999764332 2347788999999999999999999999998774 564 444444
Q ss_pred HHHHHHHHhhHHHHHHHHHHhhhcC
Q psy6102 400 IAFVRKQMRHHLNLEKMTYARMFQN 424 (426)
Q Consensus 400 l~~i~~~l~~~~~a~k~~~~k~f~~ 424 (426)
+-.+..+.++..++...++..|...
T Consensus 206 LI~glcK~G~~~e~A~~Ll~EM~~k 230 (1134)
T 3spa_A 206 ALQCMGRQDQDAGTIERCLEQMSQE 230 (1134)
T ss_dssp HHHHHHHHTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCcHHHHHHHHHHHHHc
Confidence 4446666666444444577777543
No 313
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=58.33 E-value=43 Score=31.77 Aligned_cols=27 Identities=4% Similarity=-0.114 Sum_probs=24.1
Q ss_pred CCHHHHHHHHHHHHHcCChHHHHHHHH
Q psy6102 358 NNVKALFRRGRAQVSMNNFEQGLQDYE 384 (426)
Q Consensus 358 ~~~kal~~lg~a~~~lg~~~~Al~~l~ 384 (426)
.+++.+..+|..|+..+++.+|..+|-
T Consensus 132 Gdp~LH~~~a~~~~~e~~~~~A~~H~i 158 (312)
T 2wpv_A 132 GDPYLHNTIGSKLLEGDFVYEAERYFM 158 (312)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhhcCCHHHHHHHHH
Confidence 578999999999999999999998774
No 314
>1zb1_A BRO1 protein; AIP1, BRO1 domain, SNF7, trafficking, protein transport; 1.95A {Saccharomyces cerevisiae}
Probab=56.75 E-value=35 Score=33.30 Aligned_cols=98 Identities=10% Similarity=0.084 Sum_probs=59.5
Q ss_pred hHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHH--------------------HHHHH
Q psy6102 291 RMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRA--------------------INLCD 350 (426)
Q Consensus 291 ~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~A--------------------i~~~~ 350 (426)
..+.|..+|++|--++.............++.|....++..++.+.-+.--+.+| .+.|+
T Consensus 144 ~lk~A~~~fq~AAG~f~~l~~~~~~~~~~Dls~~~l~~L~~l~LAQAQE~~~~Kai~~~~~~~k~~liAkLa~~~~~~Y~ 223 (392)
T 1zb1_A 144 DYKNSIANLTKAFSCFEYLSENFLNSPSVDLQSENTRFLANICHAEAQELFVLKLLNDQISSKQYTLISKLSRATCNLFQ 223 (392)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHCCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHTTSTTGGGCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHhccccCCchhHHHHHHHHHHHHHH
Confidence 5788999999998876655443222233445666666666555444332222222 23444
Q ss_pred HHHHh---CCC---------------------CHHHHHHHHHHHHHcCChHHHHHHHHHHHH
Q psy6102 351 DILLM---EPN---------------------NVKALFRRGRAQVSMNNFEQGLQDYEQALD 388 (426)
Q Consensus 351 ~AL~l---dp~---------------------~~kal~~lg~a~~~lg~~~~Al~~l~kAl~ 388 (426)
+|++. .+. .+.|+|..|..+...+++.+|+..++.|.+
T Consensus 224 ~a~~~l~~~~~~~~~~~~~~w~~~v~~K~~~~~A~A~y~~a~~~~e~~k~GeaIa~L~~A~~ 285 (392)
T 1zb1_A 224 KCHDFMKEIDDDVAIYGEPKWKTTVTCKLHFYKSLSAYYHGLHLEEENRVGEAIAFLDFSMQ 285 (392)
T ss_dssp HHHHHHHSCCCTTTSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHH
T ss_pred HHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHH
Confidence 44422 220 033677788888888999999999988875
No 315
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=53.75 E-value=26 Score=30.93 Aligned_cols=56 Identities=5% Similarity=-0.066 Sum_probs=39.4
Q ss_pred cchHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHH-----HHHHHHHHHHcCChHH
Q psy6102 323 SYYTAALLNMAAVQLKFKAYKRAINLCDDILLMEPNNVKA-----LFRRGRAQVSMNNFEQ 378 (426)
Q Consensus 323 p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ldp~~~ka-----l~~lg~a~~~lg~~~~ 378 (426)
...+...+.+|.+++..++|.+|.+++..|+...|..... +-.+--+-+.+|+...
T Consensus 11 ~q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~~~~~~~~k~~IL~yLIp~~Ll~G~iP~ 71 (203)
T 3t5x_A 11 AQRVTYKYYVGRKAMFDSDFKQAEEYLSFAFEHCHRSSQKNKRMILIYLLPVKMLLGHMPT 71 (203)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTTCEEC
T ss_pred HHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHCCHhHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 3457788889999999999999999999999887765432 2223333355677643
No 316
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=53.14 E-value=53 Score=36.09 Aligned_cols=77 Identities=12% Similarity=0.015 Sum_probs=57.9
Q ss_pred hcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHH-HhC--------------------CC--CHHHHHHHHHHHHHcCCh
Q psy6102 320 HFRSYYTAALLNMAAVQLKFKAYKRAINLCDDIL-LME--------------------PN--NVKALFRRGRAQVSMNNF 376 (426)
Q Consensus 320 ~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL-~ld--------------------p~--~~kal~~lg~a~~~lg~~ 376 (426)
..-|.++-.-+-+|.+++.+|++++|..++.+|- .+. +. ....|.....++...+-+
T Consensus 834 ~~~~~t~~~~yv~gr~~L~~ge~~~A~~~F~kAA~gl~~~~~~~~~~~~~~~ll~~~e~~~~~~~YY~hV~~LFE~~~a~ 913 (950)
T 4gq2_M 834 GWLNSDPIAVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAY 913 (950)
T ss_dssp GGCCSSHHHHHHHHHHHHHTTCHHHHHHHHHTCCCTTCSSCCSCGGGHHHHHHHHHTTTCSHHHHHHHHHHHHHHHTTCH
T ss_pred hhcCCChHHHHHHHHHHHHcCCHHHHHHHHHHHhhhcccCcccccchhhhhhccCcccccchhHHHHHHHHHHHHhcCCH
Confidence 3456666777899999999999999999998753 111 11 133667778888999999
Q ss_pred HHHHHHHHHHHHh-CCCcHHH
Q psy6102 377 EQGLQDYEQALDL-LPNDQQI 396 (426)
Q Consensus 377 ~~Al~~l~kAl~l-~P~n~~a 396 (426)
+-+++..+.|++. .++++..
T Consensus 914 ~~vi~fA~lAI~~~~~dd~~l 934 (950)
T 4gq2_M 914 IDALEFSLLADASKETDDEDL 934 (950)
T ss_dssp HHHHHHHHHHHHTCCSCCHHH
T ss_pred HHHHHHHHHHHhhcccCCccc
Confidence 9999999999975 4555543
No 317
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=52.81 E-value=25 Score=35.87 Aligned_cols=131 Identities=7% Similarity=-0.004 Sum_probs=49.9
Q ss_pred hhhhhhhHHHHHHHHHHHH--HHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHH----------HHHHH
Q psy6102 285 EYFKLNRMHDAQRKYKKAV--RYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAIN----------LCDDI 352 (426)
Q Consensus 285 ~~f~~g~y~~Ai~~y~kAl--~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~----------~~~~A 352 (426)
.++..++|++|..+-...+ +.+...+. ..++...+.+|+..+.++..+|.....+. .+-.+
T Consensus 145 ~L~d~k~~~~~~~~~~~~~~~~~l~~~nr-------rtlD~l~ak~~fY~s~~~e~~~~~~~~~~~~~~~~~ir~~Ll~~ 217 (523)
T 4b4t_S 145 FLWDSKELEQLVEFNRKVVIPNLLCYYNL-------RSLNLINAKLWFYIYLSHETLARSSEEINSDNQNIILRSTMMKF 217 (523)
T ss_dssp -----------------------------------------------------------------CHHHHHHHHTHHHHH
T ss_pred HHhccccHHHHHHHHHHHHHHHHHHHHhH-------HhHHHHHHHHHHHHHHHHHHhcccccccccccchhhHHHHHHHH
Confidence 4667788888887776665 33322221 22367788899999999988887765322 22222
Q ss_pred H-----HhCCCC-HHHHHHHHHHHHHcCChHHHHHHHHHHHHhCC--CcH---HHHHHHHHHHHHHhhHHHHHHHHHHhh
Q psy6102 353 L-----LMEPNN-VKALFRRGRAQVSMNNFEQGLQDYEQALDLLP--NDQ---QILKEIAFVRKQMRHHLNLEKMTYARM 421 (426)
Q Consensus 353 L-----~ldp~~-~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P--~n~---~a~~~l~~i~~~l~~~~~a~k~~~~k~ 421 (426)
+ ..|+.. +-.+..+=..|...+.|+.|.....++.-... .|. .....++.+.....++.+|...+.+.+
T Consensus 218 ~rta~lr~D~~~qa~l~nllLRnYL~~~~y~qA~~lvsk~~fP~~~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~ 297 (523)
T 4b4t_S 218 LKIASLKHDNETKAMLINLILRDFLNNGEVDSASDFISKLEYPHTDVSSSLEARYFFYLSKINAIQLDYSTANEYIIAAI 297 (523)
T ss_dssp HHHCCSCSSSCHHHHHHHHHHHHHHHSSCSTTHHHHHHHHCSCTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred HHHHhcccCcchhHHHHHHHHHHHHccCcHHHHHHHHhcCcCCcccCCHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 2 223332 44566667789999999999999999853221 222 234556999999999999988777665
Q ss_pred h
Q psy6102 422 F 422 (426)
Q Consensus 422 f 422 (426)
.
T Consensus 298 r 298 (523)
T 4b4t_S 298 R 298 (523)
T ss_dssp S
T ss_pred H
Confidence 4
No 318
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=50.68 E-value=22 Score=27.43 Aligned_cols=29 Identities=14% Similarity=0.213 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHH
Q psy6102 360 VKALFRRGRAQVSMNNFEQGLQDYEQALD 388 (426)
Q Consensus 360 ~kal~~lg~a~~~lg~~~~Al~~l~kAl~ 388 (426)
+-.+-+++..+...|+|++|+++.++|..
T Consensus 15 AH~~~RrAe~ll~~gkydeAIech~kAa~ 43 (97)
T 2crb_A 15 AHQQSRRADRLLAAGKYEEAISCHRKATT 43 (97)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hhHhhhHHHHHHhcCCHHHHHHHHHHHHH
Confidence 34567899999999999999998888764
No 319
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=50.06 E-value=25 Score=26.92 Aligned_cols=32 Identities=19% Similarity=0.339 Sum_probs=29.0
Q ss_pred hHHHHHHhccchhhhhhhHHHHHHHHHHHHHH
Q psy6102 274 DVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRY 305 (426)
Q Consensus 274 k~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~ 305 (426)
+.++.+...|..+|+.++|.+|+..|.++..+
T Consensus 51 ~~~r~~i~eak~~y~~~ny~ea~~l~~k~~n~ 82 (106)
T 2vkj_A 51 KKARSLIAEGKDLFETANYGEALVFFEKALNL 82 (106)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhcchhHHHHHHHHHHcc
Confidence 46788889999999999999999999999866
No 320
>3c3r_A Programmed cell death 6-interacting protein; ALIX BRO1 CHMP4C amphipathic-helix, apoptosis, HOST-virus interaction, protein transport, transport; 2.02A {Homo sapiens} PDB: 2oew_A 3c3o_A 3c3q_A
Probab=49.84 E-value=78 Score=30.69 Aligned_cols=99 Identities=11% Similarity=0.116 Sum_probs=59.0
Q ss_pred hHHHHHHHHHHHHHHHHhhcccch----hhhhhhcCcchHHHHHHHHHHHHHccCHHHH-----------------HHHH
Q psy6102 291 RMHDAQRKYKKAVRYIKWYNQSQS----KTQQKHFRSYYTAALLNMAAVQLKFKAYKRA-----------------INLC 349 (426)
Q Consensus 291 ~y~~Ai~~y~kAl~~~~~~~~~~~----~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~A-----------------i~~~ 349 (426)
..+.|..+|++|--++........ .....++.|....++.+++.+.-+.--+.+| .+.|
T Consensus 166 glK~A~~~fq~AAG~f~~l~~~~l~~~~~~~~~Dls~~~l~~L~~l~LAQAQE~~~~Kai~~~~k~~liAkLa~~~~~~Y 245 (380)
T 3c3r_A 166 GLKIAAKHYQFASGAFLHIKETVLSALSREPTVDISPDTVGTLSLIMLAQAQEVFFLKATRDKMKDAIIAKLANQAADYF 245 (380)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCCTTTSHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccccCCCCCccCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHH
Confidence 368888889988887655543321 1223345666666666665544332222222 2344
Q ss_pred HHHHHh---CC----CC------------HHHHHHHHHHHHHcCChHHHHHHHHHHHHh
Q psy6102 350 DDILLM---EP----NN------------VKALFRRGRAQVSMNNFEQGLQDYEQALDL 389 (426)
Q Consensus 350 ~~AL~l---dp----~~------------~kal~~lg~a~~~lg~~~~Al~~l~kAl~l 389 (426)
++|++. .. .. +.|+|..|......+++.+|+..++.|.+.
T Consensus 246 ~~A~~~l~~~~~~~~~w~~~v~~K~~~~~A~A~y~~a~~~~e~~k~GeaIa~L~~A~~~ 304 (380)
T 3c3r_A 246 GDAFKQCQYKDTLPKEVFPVLAAKHCIMQANAEYHQSILAKQQKKFGEEIARLQHAAEL 304 (380)
T ss_dssp HHHHHHHTTCCCSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHH
Confidence 444322 11 11 346788888888889999999999888763
No 321
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=49.81 E-value=19 Score=28.92 Aligned_cols=44 Identities=20% Similarity=0.369 Sum_probs=26.6
Q ss_pred cCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCC
Q psy6102 340 KAYKRAINLCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLP 391 (426)
Q Consensus 340 g~~~~Ai~~~~~AL~ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P 391 (426)
..+++|..+.++||.+|.. |.--..+..|.+++..++++|.+..
T Consensus 17 ~~h~~AF~~Is~AL~~DE~--------g~k~~Al~lYk~GI~eLe~Gl~I~~ 60 (116)
T 2dl1_A 17 EAYKKAFLFVNKGLNTDEL--------GQKEEAKNYYKQGIGHLLRGISISS 60 (116)
T ss_dssp HHHHHHHHHHHHHHHHHHH--------TCHHHHHHHHHHHHHHHHHHHSSCC
T ss_pred HHHHHHHHHHHHHhhhhhc--------CCHHHHHHHHHHHHHHHHHhccccc
Confidence 3477888888888888761 3333333444455566666666654
No 322
>4a1g_A Mitotic checkpoint serine/threonine-protein kinas; cell cycle, transferase, spindle assembly checkpoint, mitosi repeat, KNL1, KMN network; 2.60A {Homo sapiens} PDB: 2lah_A
Probab=48.07 E-value=52 Score=27.75 Aligned_cols=81 Identities=4% Similarity=-0.031 Sum_probs=56.6
Q ss_pred HHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC--CCCHHHHHHHHHHHHHcC
Q psy6102 297 RKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLME--PNNVKALFRRGRAQVSMN 374 (426)
Q Consensus 297 ~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ld--p~~~kal~~lg~a~~~lg 374 (426)
..+.+|+...... +...-+|....+|...+... +++.+.|....... -..+..|-.-|..+...|
T Consensus 49 ~lLErc~~~f~~~-------~~YknD~RyLklWl~ya~~~------~dp~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g 115 (152)
T 4a1g_A 49 TLLEHLMKEFLDK-------KKYHNDPRFISYCLKFAEYN------SDLHQFFEFLYNHGIGTLSSPLYIAWAGHLEAQG 115 (152)
T ss_dssp HHHHHHHHHHTTC-------GGGTTCHHHHHHHHHHHTTB------SCHHHHHHHHHTTTTTTTBHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhccc-------ccccCCHHHHHHHHHHHHhc------CCHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcC
Confidence 4566666654221 12223788888888887653 33666666665443 456777777788899999
Q ss_pred ChHHHHHHHHHHHHhC
Q psy6102 375 NFEQGLQDYEQALDLL 390 (426)
Q Consensus 375 ~~~~Al~~l~kAl~l~ 390 (426)
++.+|.+.|+.+++..
T Consensus 116 ~~~~A~~Vy~~Gi~~~ 131 (152)
T 4a1g_A 116 ELQHASAVLQRGIQNQ 131 (152)
T ss_dssp CHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHcC
Confidence 9999999999999875
No 323
>2xs1_A Programmed cell death 6-interacting protein; protein transport-viral protein complex, cell cycle; 2.30A {Homo sapiens} PDB: 2xs8_A 2oev_A 2r05_A 2r02_A 2r03_A 2oex_A 2ojq_A
Probab=47.63 E-value=1.1e+02 Score=32.39 Aligned_cols=99 Identities=11% Similarity=0.102 Sum_probs=59.1
Q ss_pred hHHHHHHHHHHHHHHHHhhcccch----hhhhhhcCcchHHHHHHHHHHHHHccCHHHHH-----------------HHH
Q psy6102 291 RMHDAQRKYKKAVRYIKWYNQSQS----KTQQKHFRSYYTAALLNMAAVQLKFKAYKRAI-----------------NLC 349 (426)
Q Consensus 291 ~y~~Ai~~y~kAl~~~~~~~~~~~----~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai-----------------~~~ 349 (426)
....|..+|++|.-++........ .....++.|....++..++.+..+.--+.+|+ .+|
T Consensus 151 ~lK~A~~~fq~AAG~f~~l~~~~l~~~~~~~~~Dls~~~l~~L~~l~LAQAQE~~~~Kai~~~~k~~liAkLa~~~~~~Y 230 (704)
T 2xs1_A 151 GLKIAAKHYQFASGAFLHIKETVLSALSREPTVDISPDTVGTLSLIMLAQAQEVFFLKATRDKMKDAIIAKLANQAADYF 230 (704)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCCGGGSHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccccCCCCCcccCHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHH
Confidence 478888889988887655443221 12233456666666666655443322222222 234
Q ss_pred HHHHHh---CC----CC------------HHHHHHHHHHHHHcCChHHHHHHHHHHHHh
Q psy6102 350 DDILLM---EP----NN------------VKALFRRGRAQVSMNNFEQGLQDYEQALDL 389 (426)
Q Consensus 350 ~~AL~l---dp----~~------------~kal~~lg~a~~~lg~~~~Al~~l~kAl~l 389 (426)
..|+.. .. .. +.|+|..|..+...+++.+|+..++.|...
T Consensus 231 ~~A~~~l~~~~~~~~~w~~~v~~K~~~~~A~A~y~~a~~~~e~~k~GeaIa~L~~A~~~ 289 (704)
T 2xs1_A 231 GDAFKQCQYKDTLPKEVFPVLAAKHCIMQANAEYHQSILAKQQYYFGEEIARLQHAAEL 289 (704)
T ss_dssp HHHHHHHHTCCCSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhHHHHHHHHHHHHHHH
Confidence 444432 11 11 346778888888889999999999888753
No 324
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=47.07 E-value=48 Score=26.56 Aligned_cols=17 Identities=6% Similarity=0.175 Sum_probs=8.0
Q ss_pred HHHHHHHHHHhCCCcHH
Q psy6102 379 GLQDYEQALDLLPNDQQ 395 (426)
Q Consensus 379 Al~~l~kAl~l~P~n~~ 395 (426)
|++.|..+++..|.+..
T Consensus 44 Aie~l~~alk~e~~~~~ 60 (117)
T 2cpt_A 44 AVQYFLHVVKYEAQGDK 60 (117)
T ss_dssp HHHHHHHHHHTSCCCHH
T ss_pred HHHHHHHHHHhccCCHH
Confidence 33444444445555554
No 325
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=46.12 E-value=30 Score=26.82 Aligned_cols=37 Identities=19% Similarity=0.442 Sum_probs=24.7
Q ss_pred HHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHH
Q psy6102 364 FRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEI 400 (426)
Q Consensus 364 ~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~~~l 400 (426)
..+|..+...|+++.|+.+|-+|+...|.-...+.-+
T Consensus 24 V~lGE~L~~~g~~e~av~Hf~nAl~Vc~qP~~LL~i~ 60 (95)
T 1om2_A 24 IQLGEELLAQGDYEKGVDHLTNAIAVCGQPQQLLQVL 60 (95)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHSCHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 3467777777777777777777777776655444433
No 326
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=45.25 E-value=93 Score=23.17 Aligned_cols=15 Identities=20% Similarity=-0.048 Sum_probs=7.5
Q ss_pred HHccCHHHHHHHHHH
Q psy6102 337 LKFKAYKRAINLCDD 351 (426)
Q Consensus 337 ~~lg~~~~Ai~~~~~ 351 (426)
-+.|+|.+|+.+|..
T Consensus 30 D~~g~y~eAl~lY~~ 44 (83)
T 2w2u_A 30 DKEGNAEEAITNYKK 44 (83)
T ss_dssp HHTTCHHHHHHHHHH
T ss_pred HHhccHHHHHHHHHH
Confidence 345555555555433
No 327
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=45.22 E-value=33 Score=36.10 Aligned_cols=53 Identities=17% Similarity=0.244 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHH
Q psy6102 326 TAALLNMAAVQLKFKAYKRAINLCDDILLMEPNNVKALFRRGRAQVSMNNFEQ 378 (426)
Q Consensus 326 ~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ldp~~~kal~~lg~a~~~lg~~~~ 378 (426)
......+|...+..|+|..|.+.++.++..+|+|.+|...++.+|..+|.-.+
T Consensus 449 ~~~~~~~a~~~~~~g~~~wa~~l~~~~~~~~p~~~~a~~l~a~~~~~l~~~~~ 501 (658)
T 2cfu_A 449 AERLLEQARASYARGEYRWVVEVVNRLVFAEPDNRAARELQADALEQLGYQAE 501 (658)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhcc
Confidence 34567788888999999999999999999999999999999999999875443
No 328
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=45.14 E-value=15 Score=27.36 Aligned_cols=35 Identities=20% Similarity=0.186 Sum_probs=28.1
Q ss_pred HHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhc
Q psy6102 276 IRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYN 310 (426)
Q Consensus 276 a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~ 310 (426)
......+|..+--.|+|+.|+.+|+.+++.+..+.
T Consensus 12 i~e~~k~ARe~Al~GnYdta~~yY~g~~~qI~k~l 46 (78)
T 2rpa_A 12 IVENVKLAREYALLGNYDSAMVYYQGVLDQMNKYL 46 (78)
T ss_dssp HHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHH
Confidence 44456677778888899999999999999876554
No 329
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=44.83 E-value=1.2e+02 Score=27.37 Aligned_cols=60 Identities=13% Similarity=0.162 Sum_probs=45.2
Q ss_pred hhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHH-HccCHHHHHHHHHHHHHh
Q psy6102 288 KLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQL-KFKAYKRAINLCDDILLM 355 (426)
Q Consensus 288 ~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~-~lg~~~~Ai~~~~~AL~l 355 (426)
..|+-+.|...|++|.++.... ..--+|....+..|.+..|+ -+++.++|+..+++|+..
T Consensus 137 ~~g~~e~a~~aY~~A~~iA~~~--------L~pthPirLGLaLNfSVFyYEIln~p~~Ac~lAk~Afd~ 197 (227)
T 2o8p_A 137 GLCSLEDSKKIHQDAFTLLCEH--------PDKIEQLPLGFIQNLAYILSEKYGEKKQVFNMLNSLGKI 197 (227)
T ss_dssp TSSCHHHHHHHHHHHHHHHHHC--------GGGGGGSCHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHHHHhh--------CCCCChHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHH
Confidence 3555889999999999985321 11226777788888888777 578999999999999763
No 330
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=42.34 E-value=53 Score=30.26 Aligned_cols=55 Identities=16% Similarity=0.190 Sum_probs=39.2
Q ss_pred hHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHH-ccCHHHHHHHHHHHHH
Q psy6102 291 RMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLK-FKAYKRAINLCDDILL 354 (426)
Q Consensus 291 ~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~-lg~~~~Ai~~~~~AL~ 354 (426)
--+.|...|++|+++. .. ..--+|....+..|.+.-|+. +++.++|++.+++|+.
T Consensus 171 ~~e~a~~aY~~A~~iA-~~--------L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd 226 (260)
T 2npm_A 171 SAEDALKAYKDATVVA-KD--------LEPTHPIRLGLALNFSVFHYEILNEPRAAIDMAKEAFE 226 (260)
T ss_dssp HHHHHHHHHHHHHHHH-TT--------SCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH-Hh--------CCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 3467888999999984 21 111145566677777777776 8999999998888774
No 331
>4aez_C MAD3, mitotic spindle checkpoint component MAD3; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=42.32 E-value=57 Score=29.36 Aligned_cols=81 Identities=7% Similarity=-0.004 Sum_probs=56.5
Q ss_pred HHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC--CCCHHHHHHHHHHHHHcC
Q psy6102 297 RKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLME--PNNVKALFRRGRAQVSMN 374 (426)
Q Consensus 297 ~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ld--p~~~kal~~lg~a~~~lg 374 (426)
..+.+|+..+... +...-+|.+..+|...+.. . +++...|....... -..+..|-..|..+...|
T Consensus 98 ~lLErc~~~F~~~-------~rYknD~RyLklWl~Ya~~---~---~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g 164 (223)
T 4aez_C 98 TLLERCTREFVRN-------PLYKDDVRYLRIWMQYVNY---I---DEPVELFSFLAHHHIGQESSIFYEEYANYFESRG 164 (223)
T ss_dssp HHHHHHHHHTTTC-------GGGTTCHHHHHHHHHHHTT---C---SCHHHHHHHHHHTTCSTTBHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhccc-------ccccCCHHHHHHHHHHHHc---c---CCHHHHHHHHHHCCcchhHHHHHHHHHHHHHHcC
Confidence 4566666653221 1222388889999988874 2 35556666555444 466777777788899999
Q ss_pred ChHHHHHHHHHHHHhC
Q psy6102 375 NFEQGLQDYEQALDLL 390 (426)
Q Consensus 375 ~~~~Al~~l~kAl~l~ 390 (426)
++.+|.+.|+.+++..
T Consensus 165 ~~~~A~~Vy~~Gi~~~ 180 (223)
T 4aez_C 165 LFQKADEVYQKGKRMK 180 (223)
T ss_dssp CHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHcC
Confidence 9999999999999875
No 332
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=41.73 E-value=2.3e+02 Score=26.66 Aligned_cols=93 Identities=13% Similarity=-0.066 Sum_probs=54.7
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHh-----CCCCHHHHHHHHHHHHHcCChH-HHHHHHHHHHHhC-------CC
Q psy6102 326 TAALLNMAAVQLKFKAYKRAINLCDDILLM-----EPNNVKALFRRGRAQVSMNNFE-QGLQDYEQALDLL-------PN 392 (426)
Q Consensus 326 ~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~l-----dp~~~kal~~lg~a~~~lg~~~-~Al~~l~kAl~l~-------P~ 392 (426)
.++++.=|..+++.|++..|.+.+...++. .|-+....-++..++.....-+ .=....++|+.+. -.
T Consensus 53 idlL~~ga~~ll~~~Q~~sa~DLa~llvev~~~~~~~~~~~~~~rl~~l~~~~p~~~~~r~~fi~~ai~WS~~~g~~~~G 132 (312)
T 2wpv_A 53 IELISQGALSFLKAKQGGSGTDLIFYLLEVYDLAEVKVDDISVARLVRLIAELDPSEPNLKDVITGMNNWSIKFSEYKFG 132 (312)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCCSHHHHHHHHHHHTTCCTTCTTHHHHHHHHHHHHHHTSSCTTC
T ss_pred HHHHHHHHHHHHHCCCcchHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHCCCCCchHHHHHHHHHHHHhhcCCCCCC
Confidence 334455555556666666666654443332 2334455555555554433222 1244566666542 25
Q ss_pred cHHHHHHHHHHHHHHhhHHHHHHHHH
Q psy6102 393 DQQILKEIAFVRKQMRHHLNLEKMTY 418 (426)
Q Consensus 393 n~~a~~~l~~i~~~l~~~~~a~k~~~ 418 (426)
+++....++..+-..++..+|+++..
T Consensus 133 dp~LH~~~a~~~~~e~~~~~A~~H~i 158 (312)
T 2wpv_A 133 DPYLHNTIGSKLLEGDFVYEAERYFM 158 (312)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CHHHHHHHHHHHhhcCCHHHHHHHHH
Confidence 78899999999998888888887653
No 333
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=41.69 E-value=1e+02 Score=22.75 Aligned_cols=53 Identities=15% Similarity=0.227 Sum_probs=33.3
Q ss_pred HHHHHHHHHHcCChHHHHHHHHHHHHh------CCCcHHHHHHHHHHHHHHhhHHHHHH
Q psy6102 363 LFRRGRAQVSMNNFEQGLQDYEQALDL------LPNDQQILKEIAFVRKQMRHHLNLEK 415 (426)
Q Consensus 363 l~~lg~a~~~lg~~~~Al~~l~kAl~l------~P~n~~a~~~l~~i~~~l~~~~~a~k 415 (426)
...+|.=|..+|+|+.|+.+|+.+++. .=+|+.....-..+...+.++-+..|
T Consensus 15 ~~k~ARe~Al~GnYdta~~yY~g~~~qI~k~l~~~~d~~~r~kW~~~~~ei~~E~~~Vk 73 (78)
T 2rpa_A 15 NVKLAREYALLGNYDSAMVYYQGVLDQMNKYLYSVKDTHLRQKWQQVWQEINVEAKQVK 73 (78)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhcCCHHHHHhHHHHHHHHHHHHHHHH
Confidence 345677777888888888888888763 11355555555556555555544443
No 334
>3qnk_A Putative lipoprotein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG, protein structure initiative; 2.70A {Bacteroides fragilis}
Probab=41.48 E-value=1.9e+02 Score=28.96 Aligned_cols=48 Identities=15% Similarity=0.189 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHHhCCC-----------CHHHHHHHHHHHHHcCChHHHHHHHHHHHHh
Q psy6102 342 YKRAINLCDDILLMEPN-----------NVKALFRRGRAQVSMNNFEQGLQDYEQALDL 389 (426)
Q Consensus 342 ~~~Ai~~~~~AL~ldp~-----------~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l 389 (426)
|+..+++++.|+.+-|. ..-|+-.+|.+|+..+++++|++..++++..
T Consensus 153 ~~~I~~dL~~A~~~Lp~~~~~~~~gr~tk~aA~allarv~L~~~~~~~A~~~a~~vi~~ 211 (517)
T 3qnk_A 153 YDFILEDLKKATEMLPASYGSREKGRATKGAAYALKSRVELYDKRYEDVIKSCAEVYKL 211 (517)
T ss_dssp HHHHHHHHHHHHHHSCSCCCSTTTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhCccccCCcccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 45566777777765443 2457888999999999999999999999863
No 335
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=41.25 E-value=42 Score=25.97 Aligned_cols=39 Identities=8% Similarity=0.069 Sum_probs=30.7
Q ss_pred ccchhhhHHHHHHhccchhhhhhhHHHHHHHHHHHHHHH
Q psy6102 268 VLNQMEDVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYI 306 (426)
Q Consensus 268 ~~i~ilk~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~ 306 (426)
........-.....+|..+...|+++.|+.+|.+||..+
T Consensus 12 d~e~~e~~Fl~eV~lGE~L~~~g~~e~av~Hf~nAl~Vc 50 (95)
T 1om2_A 12 DAEAVQKFFLEEIQLGEELLAQGDYEKGVDHLTNAIAVC 50 (95)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHc
Confidence 344444455566789999999999999999999999974
No 336
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=40.72 E-value=45 Score=36.65 Aligned_cols=83 Identities=13% Similarity=0.093 Sum_probs=58.8
Q ss_pred HHhccchhhhhhhHHHHHHHHHHHHHHHHhhccc--ch-----hhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHH
Q psy6102 279 IKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQS--QS-----KTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDD 351 (426)
Q Consensus 279 ~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~--~~-----~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~ 351 (426)
-+-+|..+...|++++|..+|++|-.-+...... .. .-...+........|...+..+.+.+-++.+++.++.
T Consensus 843 ~yv~gr~~L~~ge~~~A~~~F~kAA~gl~~~~~~~~~~~~~~~ll~~~e~~~~~~~YY~hV~~LFE~~~a~~~vi~fA~l 922 (950)
T 4gq2_M 843 VYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEFSLL 922 (950)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTCCCTTCSSCCSCGGGHHHHHHHHHTTTCSHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHhhhcccCcccccchhhhhhccCcccccchhHHHHHHHHHHHHhcCCHHHHHHHHHH
Confidence 4789999999999999999999886432111100 00 1112223344566999999999999999999999999
Q ss_pred HHHh-CCCCHH
Q psy6102 352 ILLM-EPNNVK 361 (426)
Q Consensus 352 AL~l-dp~~~k 361 (426)
||.. ++++..
T Consensus 923 AI~~~~~dd~~ 933 (950)
T 4gq2_M 923 ADASKETDDED 933 (950)
T ss_dssp HHHTCCSCCHH
T ss_pred HHhhcccCCcc
Confidence 9964 455543
No 337
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=39.73 E-value=78 Score=32.96 Aligned_cols=126 Identities=6% Similarity=-0.156 Sum_probs=75.4
Q ss_pred hccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCH
Q psy6102 281 NSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLMEPNNV 360 (426)
Q Consensus 281 ~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ldp~~~ 360 (426)
..+.......+.+.|...+.+..... ... ......++..+|.-++..+...++..++..+.....+..
T Consensus 219 ~~~~~rlar~d~~~A~~~~~~~~~~~-~~~-----------~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (618)
T 1qsa_A 219 AVAFASVARQDAENARLMIPSLAQAQ-QLN-----------EDQIQELRDIVAWRLMGNDVTDEQAKWRDDAIMRSQSTS 286 (618)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHHHHHT-TCC-----------HHHHHHHHHHHHHTSCSTTCCHHHHHHHHHHHHTCCCHH
T ss_pred HHHHHHHHhcCHHHHHHHHHhhhhcc-CCC-----------HHHHHHHHHHHHHHHHHcCCChHHHHHHHhccccCCChH
Confidence 33444455567777777776654421 000 111122333344444444535677777777766555444
Q ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhhHHHHHHHHHHh
Q psy6102 361 KALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLNLEKMTYAR 420 (426)
Q Consensus 361 kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~~~l~~i~~~l~~~~~a~k~~~~k 420 (426)
..-+..+.++ ..+++..|...|++.-.-.+........+++....+++..++.. .|++
T Consensus 287 ~~e~~~r~Al-r~~d~~~a~~~~~~l~~~~~~~~r~~YW~~ra~~~~g~~~~a~~-~~~~ 344 (618)
T 1qsa_A 287 LIERRVRMAL-GTGDRRGLNTWLARLPMEAKEKDEWRYWQADLLLERGREAEAKE-ILHQ 344 (618)
T ss_dssp HHHHHHHHHH-HHTCHHHHHHHHHHSCTTGGGSHHHHHHHHHHHHHTTCHHHHHH-HHHH
T ss_pred HHHHHHHHHH-HCCCHHHHHHHHHHccccccccHhHHHHHHHHHHHcCCHHHHHH-HHHH
Confidence 4444445554 56999999999876544333557788999999999888887654 4444
No 338
>3hdx_A SUSD homolog, SUSD superfamily protein; NP_809182.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides thetaiotaomicron vpi-5482}
Probab=39.29 E-value=99 Score=30.74 Aligned_cols=48 Identities=10% Similarity=-0.083 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHHhCCC-----------------------CHHHHHHHHHHHHHcCChHHHHHHHHHHHHh
Q psy6102 342 YKRAINLCDDILLMEPN-----------------------NVKALFRRGRAQVSMNNFEQGLQDYEQALDL 389 (426)
Q Consensus 342 ~~~Ai~~~~~AL~ldp~-----------------------~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l 389 (426)
|+..+++++.|+.+=|. ..-|+-.+|.+|+.++++++|++..++++..
T Consensus 156 y~~I~~DL~~A~~~Lp~~~~~~~~~~~~~~~~~~~~~r~tk~aA~allarvyL~~~~~~~A~~~a~~vi~~ 226 (478)
T 3hdx_A 156 LSYAKAELLTAIEDLPYQYGTQTNLYYGSYGAQWQGKLFNKLSAYSVLAHICAWQGNYAEAETYSAFIIDH 226 (478)
T ss_dssp HHHHHHHHHHHHHHCCSSCCCSSSCBTTBCGGGGTTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcccccCCccccccccccccccccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhC
Confidence 45566777777765331 2347888899999999999999999999864
No 339
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=38.70 E-value=69 Score=31.12 Aligned_cols=25 Identities=16% Similarity=0.252 Sum_probs=11.6
Q ss_pred cchhhhhhhHHHHHHHHHHHHHHHH
Q psy6102 283 GNEYFKLNRMHDAQRKYKKAVRYIK 307 (426)
Q Consensus 283 G~~~f~~g~y~~Ai~~y~kAl~~~~ 307 (426)
|.-+++.++|.+|+.+|..|-..+.
T Consensus 303 gGy~yR~~~~reAl~~WA~Aa~Vi~ 327 (472)
T 3re2_A 303 GGYYYRKKKYYEAIASWVDAGYVAG 327 (472)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHT
T ss_pred hhhhhhcchHHHHHHHHHHHHHHHH
Confidence 3344444444444444444444433
No 340
>2wvi_A Mitotic checkpoint serine/threonine-protein kinase BUB1 beta; tumor suppressor, TPR, apoptosis, cell division, cell cycle, kinetochore, transferase; 1.80A {Homo sapiens} PDB: 3si5_A
Probab=38.60 E-value=1.8e+02 Score=24.63 Aligned_cols=63 Identities=5% Similarity=0.084 Sum_probs=49.0
Q ss_pred CcchHHHHHHHHHHHHHccCHHHHHHHHHHHHHh--CCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhC
Q psy6102 322 RSYYTAALLNMAAVQLKFKAYKRAINLCDDILLM--EPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLL 390 (426)
Q Consensus 322 ~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~l--dp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~ 390 (426)
+|....+|...+.+. ++ +.+.|...... --..+..|-.-|..+...|++.+|.+.|+.+++..
T Consensus 62 D~RyLklWl~ya~~~---~~---p~~if~~L~~~~IG~~~AlfY~~wA~~lE~~~~~~~A~~Iy~~Gi~~~ 126 (164)
T 2wvi_A 62 DPRFLNLWLKLGRLC---NE---PLDMYSYLHNQGIGVSLAQFYISWAEEYEARENFRKADAIFQEGIQQK 126 (164)
T ss_dssp CHHHHHHHHHHHHHC---SC---HHHHHHHHHHTTSSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHhc---CC---HHHHHHHHHHCCcchhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC
Confidence 888899999888763 33 55566555544 34667777777888999999999999999999975
No 341
>2ymb_A MITD1, MIT domain-containing protein 1; protein transport, membrane, PLD; 3.40A {Homo sapiens}
Probab=38.39 E-value=6.6 Score=36.31 Aligned_cols=38 Identities=13% Similarity=0.060 Sum_probs=0.0
Q ss_pred hhHHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhc
Q psy6102 273 EDVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYN 310 (426)
Q Consensus 273 lk~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~ 310 (426)
...|..+...|..+=+.|+|++|+.+|.+|++++-...
T Consensus 20 ~~~Ai~lv~~AVe~D~~g~y~eAl~lY~eaIe~Ll~al 57 (257)
T 2ymb_A 20 STAAATVLKRAVELDSESRYPQALVCYQEGIDLLLQVL 57 (257)
T ss_dssp --------------------------------------
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHH
Confidence 34566778888999999999999999999999864433
No 342
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=36.80 E-value=1.3e+02 Score=22.31 Aligned_cols=16 Identities=19% Similarity=0.007 Sum_probs=7.7
Q ss_pred HHccCHHHHHHHHHHH
Q psy6102 337 LKFKAYKRAINLCDDI 352 (426)
Q Consensus 337 ~~lg~~~~Ai~~~~~A 352 (426)
-+.|+|.+|+..|..+
T Consensus 22 D~~g~y~eAl~lY~~a 37 (83)
T 2v6y_A 22 DKEGKVEDAITYYKKA 37 (83)
T ss_dssp HHTTCHHHHHHHHHHH
T ss_pred HHhccHHHHHHHHHHH
Confidence 3445555555544433
No 343
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=36.70 E-value=82 Score=28.51 Aligned_cols=55 Identities=15% Similarity=0.070 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHH-ccCHHHHHHHHHHHHH
Q psy6102 292 MHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLK-FKAYKRAINLCDDILL 354 (426)
Q Consensus 292 y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~-lg~~~~Ai~~~~~AL~ 354 (426)
-+.|...|++|+++.... ..--+|....+..|.+.-|+. +++.++|+..+++|+.
T Consensus 146 ~e~a~~aY~~A~~iA~~~--------L~pthPirLgLaLN~SVF~yEil~~~~~A~~lAk~afd 201 (234)
T 2br9_A 146 AENSLVAYKAASDIAMTE--------LPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 201 (234)
T ss_dssp HHHHHHHHHHHHHHHHHH--------SCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcc--------CCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 456777888888874211 111245555666677666665 7888888887777663
No 344
>3u84_A Menin; MLL, JUND, ledgf, TPR, transglutaminase-like, transcription, epigenetics, cancer; 2.50A {Homo sapiens} PDB: 3u85_A 3u86_A 3u88_A*
Probab=35.97 E-value=78 Score=31.34 Aligned_cols=48 Identities=17% Similarity=0.198 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHH
Q psy6102 295 AQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDIL 353 (426)
Q Consensus 295 Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL 353 (426)
++.+|.+||.....+= ....+--|..+|-++++.+++.+|+..+..|-
T Consensus 298 ~~~L~~~AI~sa~~~Y-----------~n~HvYPYtYlgGy~yR~~~~reAl~~WA~Aa 345 (550)
T 3u84_A 298 PLTLYHKGIASAKTYY-----------RDEHIYPYMYLAGYHCRNRNVREALQAWADTA 345 (550)
T ss_dssp HHHHHHHHHHHHHHHS-----------TTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh-----------ccCCccceeecchhhhhcchHHHHHHHHHHHH
Confidence 6667777777643322 33444556677778888888888887766554
No 345
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=34.31 E-value=81 Score=27.64 Aligned_cols=35 Identities=17% Similarity=0.181 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcH
Q psy6102 360 VKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQ 394 (426)
Q Consensus 360 ~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~ 394 (426)
...+|.+|..++..++|.+|.+++..|++..|.+.
T Consensus 14 v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~~~~~ 48 (203)
T 3t5x_A 14 VTYKYYVGRKAMFDSDFKQAEEYLSFAFEHCHRSS 48 (203)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCTTC
T ss_pred HHHHHHHHHHHHHHhCHHHHHHHHHHHHHHCCHhH
Confidence 45688999999999999999999999999988653
No 346
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=32.33 E-value=1.1e+02 Score=25.73 Aligned_cols=35 Identities=11% Similarity=0.031 Sum_probs=31.2
Q ss_pred CcchHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC
Q psy6102 322 RSYYTAALLNMAAVQLKFKAYKRAINLCDDILLME 356 (426)
Q Consensus 322 ~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ld 356 (426)
.+-+++++..+|.+|-++|+..+|-+.+.+|.+--
T Consensus 121 ~~~~~~~l~kia~Ay~Klg~~r~a~eLl~~AC~kG 155 (172)
T 1wy6_A 121 NEVSASILVAIANALRRVGDERDATTLLIEACKKG 155 (172)
T ss_dssp CCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred CCCChHHHHHHHHHHHHhcchhhHHHHHHHHHHhh
Confidence 45679999999999999999999999999998653
No 347
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=32.31 E-value=1.1e+02 Score=28.27 Aligned_cols=54 Identities=15% Similarity=0.122 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHH-ccCHHHHHHHHHHHH
Q psy6102 292 MHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLK-FKAYKRAINLCDDIL 353 (426)
Q Consensus 292 y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~-lg~~~~Ai~~~~~AL 353 (426)
-+.|...|++|.++... ...--+|....+..|.+.-|+. +++.++|+..+++|+
T Consensus 172 ~e~a~~aY~~A~~iA~~--------~L~pThPirLGLaLNfSVFyYEIln~p~~Ac~LAk~AF 226 (261)
T 3ubw_A 172 AENSLVAYKAASDIAMT--------ELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAF 226 (261)
T ss_dssp HHHHHHHHHHHHHHHHH--------HSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh--------hCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 35667788888876321 1111245555566666666665 678888887777665
No 348
>3jq1_A SUSD superfamily protein; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2, RAGB; HET: MSE; 1.55A {Bacteroides vulgatus atcc 8482}
Probab=31.71 E-value=1.8e+02 Score=28.92 Aligned_cols=47 Identities=15% Similarity=0.125 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHHhCCC--------CHHHHHHHHHHHHHcCChHHHHHHHHHHHH
Q psy6102 342 YKRAINLCDDILLMEPN--------NVKALFRRGRAQVSMNNFEQGLQDYEQALD 388 (426)
Q Consensus 342 ~~~Ai~~~~~AL~ldp~--------~~kal~~lg~a~~~lg~~~~Al~~l~kAl~ 388 (426)
|+..+++++.|+.+=|. ..-|+-.+|.+|+.++++++|++..++++.
T Consensus 154 y~~I~~DL~~A~~~Lp~~~~~gr~tk~aA~allarvyL~~~~~~~A~~~a~~vi~ 208 (481)
T 3jq1_A 154 WAQAKEDLKTAASLLPITNKIGKPTQGAAYAALGKIYVYEENWQEAINVLEPLTQ 208 (481)
T ss_dssp HHHHHHHHHHHHHHSCSSCSTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHGGGGS
T ss_pred HHHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 56667778788765442 245788899999999999999999988874
No 349
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=31.62 E-value=1.1e+02 Score=28.18 Aligned_cols=54 Identities=17% Similarity=0.129 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHH-ccCHHHHHHHHHHHH
Q psy6102 292 MHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLK-FKAYKRAINLCDDIL 353 (426)
Q Consensus 292 y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~-lg~~~~Ai~~~~~AL 353 (426)
-+.|...|++|+++.... ..--+|....+..|.+.-|+. +++.++|+..+++|+
T Consensus 151 ~e~a~~aY~~A~~iA~~~--------L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Af 205 (260)
T 1o9d_A 151 AESTLTAYKAAQDIATTE--------LAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAF 205 (260)
T ss_dssp HHHHHHHHHHHHHHHHHH--------SCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhc--------CCCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 457888899999874311 111255666677777777775 789999999888876
No 350
>2g0u_A Type III secretion system needle protein; helix-turn-helix, unknown function; NMR {Burkholderia pseudomallei} SCOP: a.2.20.1
Probab=31.47 E-value=1.7e+02 Score=22.30 Aligned_cols=43 Identities=19% Similarity=0.231 Sum_probs=25.2
Q ss_pred hHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhhHHHHHHHHH
Q psy6102 376 FEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLNLEKMTY 418 (426)
Q Consensus 376 ~~~Al~~l~kAl~l~P~n~~a~~~l~~i~~~l~~~~~a~k~~~ 418 (426)
...++..-.++++.+|+|+.++..+........-...++-..-
T Consensus 32 ~~~~l~~Al~~L~~~psNPa~LAe~Qa~lseynl~RNaQSnti 74 (92)
T 2g0u_A 32 LNKQLQDAQANLTKNPSDPTALANYQMIMSEYNLYRNAQSSAV 74 (92)
T ss_dssp HHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444455566788888777776666665554455544333
No 351
>3snx_A SUSD homolog, putative SUSD-like carbohydrate binding protein; alpha-alpha superhelix, structural genomics; HET: MSE; 1.88A {Bacteroides thetaiotaomicron}
Probab=31.35 E-value=89 Score=31.01 Aligned_cols=61 Identities=13% Similarity=0.074 Sum_probs=41.3
Q ss_pred hHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q psy6102 291 RMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILL 354 (426)
Q Consensus 291 ~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ 354 (426)
=|+.-+..+++|+..++..... .....-.+....++..+|.+|+.+++|++|+..+++++.
T Consensus 159 vy~~I~~DL~~A~~~L~~~~~~---~~~~~gr~tk~aA~aLlARvyL~~~~~~~A~~~a~~vi~ 219 (460)
T 3snx_A 159 VYQQIFDDLNLAQDYLTNYVRK---GDGQKFKPNTDVVNGLMARAYLLTGQWGEAAKAAEAARK 219 (460)
T ss_dssp HHHHHHHHHHHHHHHTTTCCCC---SGGGTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHhcccccCC---ccccCcccCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 3555566667777665322110 000112456677999999999999999999999999985
No 352
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=30.61 E-value=1.2e+02 Score=27.73 Aligned_cols=55 Identities=15% Similarity=0.108 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHH-ccCHHHHHHHHHHHHH
Q psy6102 292 MHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLK-FKAYKRAINLCDDILL 354 (426)
Q Consensus 292 y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~-lg~~~~Ai~~~~~AL~ 354 (426)
-+.|...|++|.++.... ..--+|....+..|.+.-|+. +++.++|+..+++|+.
T Consensus 147 ~~~a~~aY~~A~~iA~~~--------L~pthPirLGLaLNfSVFyYEIln~~~~Ac~lAk~Afd 202 (248)
T 3uzd_A 147 VESSEKAYSEAHEISKEH--------MQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFD 202 (248)
T ss_dssp HHHHHHHHHHHHHHHHHH--------SCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhh--------CCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 456777888888874211 111245555666677666665 7888888887777653
No 353
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=30.47 E-value=1.1e+02 Score=30.29 Aligned_cols=48 Identities=10% Similarity=0.083 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHhCCC--------CHHHHHHHHHHHHHcCChHHHHHHHHHHHHh
Q psy6102 342 YKRAINLCDDILLMEPN--------NVKALFRRGRAQVSMNNFEQGLQDYEQALDL 389 (426)
Q Consensus 342 ~~~Ai~~~~~AL~ldp~--------~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l 389 (426)
|+..+++++.|+.+-|. ..-|+-.+|.+|+.++++++|++..++++..
T Consensus 164 y~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allarvyL~~~~~~~A~~~a~~vi~~ 219 (454)
T 3myv_A 164 YDFIIETLEEAVTLMSEEKNNGRMNKYAARALLARIYLYHDDNRKAFDLADQLIKD 219 (454)
T ss_dssp HHHHHHHHHHHHHHCCCSCCTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccccccCCeecHHHHHHHHHHHHHhcccHHHHHHHHHHHHhC
Confidence 45667777777765443 3557888999999999999999999999853
No 354
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=30.44 E-value=1.7e+02 Score=21.83 Aligned_cols=18 Identities=28% Similarity=0.460 Sum_probs=8.9
Q ss_pred HHcCChHHHHHHHHHHHH
Q psy6102 371 VSMNNFEQGLQDYEQALD 388 (426)
Q Consensus 371 ~~lg~~~~Al~~l~kAl~ 388 (426)
-..|+|++|+.+|..|++
T Consensus 27 D~~g~y~eAl~lY~~Aie 44 (86)
T 4a5x_A 27 DSESRYPQALVCYQEGID 44 (86)
T ss_dssp HHTTCHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHH
Confidence 344555555555555443
No 355
>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP}
Probab=36.59 E-value=11 Score=39.96 Aligned_cols=54 Identities=13% Similarity=0.085 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhhHHHH
Q psy6102 360 VKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLNL 413 (426)
Q Consensus 360 ~kal~~lg~a~~~lg~~~~Al~~l~kAl~l~P~n~~a~~~l~~i~~~l~~~~~a 413 (426)
.++...+|+..+..|+|.-|.+.++.++..+|+|.+++..++.++.+++...+.
T Consensus 461 ~~~~~~~a~~~~~~g~~~wa~~l~~~~~~a~p~~~~ar~l~a~~~~~l~~~~~~ 514 (668)
T 2yhe_A 461 ADAVLKQMRAAIDKGDYRWAVQLGNHLVFADPANKDARALQADAMEQLGYQTEN 514 (668)
Confidence 456777888888889999999999999999999999999999988888766544
No 356
>3u84_A Menin; MLL, JUND, ledgf, TPR, transglutaminase-like, transcription, epigenetics, cancer; 2.50A {Homo sapiens} PDB: 3u85_A 3u86_A 3u88_A*
Probab=30.40 E-value=4.1e+02 Score=26.30 Aligned_cols=61 Identities=15% Similarity=0.203 Sum_probs=44.3
Q ss_pred HHHHHHHHHH-----hCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHh------CCCcHHHHHHHHHHHH
Q psy6102 345 AINLCDDILL-----MEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDL------LPNDQQILKEIAFVRK 405 (426)
Q Consensus 345 Ai~~~~~AL~-----ldp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l------~P~n~~a~~~l~~i~~ 405 (426)
++..|.+|+. ....+.-.|..+|-.+++.+++.+|+..|-.|-.. .-+|.++.+.+-.+..
T Consensus 298 ~~~L~~~AI~sa~~~Y~n~HvYPYtYlgGy~yR~~~~reAl~~WA~Aa~Vi~~YNY~reDeEIYKEf~eIAn 369 (550)
T 3u84_A 298 PLTLYHKGIASAKTYYRDEHIYPYMYLAGYHCRNRNVREALQAWADTATVIQDYNYCREDEEIYKEFFEVAN 369 (550)
T ss_dssp HHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCCCGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCCccceeecchhhhhcchHHHHHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHH
Confidence 4444444443 34567888999999999999999999999888653 3467777777665544
No 357
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=29.55 E-value=69 Score=25.70 Aligned_cols=34 Identities=18% Similarity=0.191 Sum_probs=26.9
Q ss_pred hHHHHHHhccchhhhhhhHHHHHHHHHHHHHHHH
Q psy6102 274 DVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIK 307 (426)
Q Consensus 274 k~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~ 307 (426)
+.+..+.+.|...=..|+-++|+.+|++.|..+.
T Consensus 20 ~~AF~~Is~AL~~DE~g~k~~Al~lYk~GI~eLe 53 (116)
T 2dl1_A 20 KKAFLFVNKGLNTDELGQKEEAKNYYKQGIGHLL 53 (116)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHHHH
Confidence 3566677777777778899999999999998754
No 358
>3qtm_A Uncharacterized protein C4B3.07; tetratricopeptide repeat, enhancer of translation terminatio translation; HET: CME; 2.15A {Schizosaccharomyces pombe} PDB: 3qtn_B
Probab=29.27 E-value=1.8e+02 Score=26.97 Aligned_cols=96 Identities=11% Similarity=0.034 Sum_probs=61.9
Q ss_pred HHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHH---HHH------Hcc-----
Q psy6102 275 VIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAA---VQL------KFK----- 340 (426)
Q Consensus 275 ~a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~---~~~------~lg----- 340 (426)
...-++.+.......|+.++.+...+=.|.-++..-.... ....+ |....+.+.+|. .-+ +.+
T Consensus 21 ql~gly~msre~le~g~i~~sv~LLNGIIHECDRLLR~~e--~~~~L-pd~FhAIYAlALl~lSELa~~a~Fk~ede~~V 97 (346)
T 3qtm_A 21 QLWGLYEMSREKLENDDIDASVSLVFGTIHEADRILRNTE--DISTL-PKDFHAAYSSALLAVSELFEIAQKRLKETNTE 97 (346)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHCS--CGGGS-CHHHHHHHHHHHHHHHHTHHHHGGGSCTTCCH
T ss_pred HHHhHHHHHHHHhhccCchhhhHHHcChHHHHHHHHHccC--CCCCC-CHHHHHHHHHHHHhHHHhhHHhhccCchhhhH
Confidence 4456788888888999999999888877765554433221 11123 333333344443 111 222
Q ss_pred --CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Q psy6102 341 --AYKRAINLCDDILLMEPNNVKALFRRGRAQVSM 373 (426)
Q Consensus 341 --~~~~Ai~~~~~AL~ldp~~~kal~~lg~a~~~l 373 (426)
=++.|++-++..++..|++....+.++.+++..
T Consensus 98 ~eFFDaALERielGLe~~p~s~~L~la~SKILlqr 132 (346)
T 3qtm_A 98 ESYIDAAIERAQLGLDAPGNESRLFLALARAYLEK 132 (346)
T ss_dssp HHHHHHHHHHHHHGGGSSSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhhhCCCChhHHHHHHHHHHHH
Confidence 267788888888888999998888888887654
No 359
>3i4g_A SUSD-like carbohydrate binding protein BF1063; structural genomics, center for structural genomics, JCSG; HET: MSE EPE; 1.35A {Bacteroides fragilis nctc 9343}
Probab=29.04 E-value=2.8e+02 Score=27.89 Aligned_cols=93 Identities=13% Similarity=0.110 Sum_probs=0.0
Q ss_pred hhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccC----------------------------
Q psy6102 290 NRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKA---------------------------- 341 (426)
Q Consensus 290 g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~---------------------------- 341 (426)
..+-.+|...+.+|+.++.. ........-. ..+++.||.+|+.+-+
T Consensus 93 ~~~Y~~I~~~N~~l~~i~~~--~~~~~~~~~~----aEa~flRA~~Yf~L~~~yG~VPl~~~~~~~~~~~~~~r~~~~ev 166 (528)
T 3i4g_A 93 ETSYKRIGYCNRFLVGIQNS--SESEKKTRMI----AEARFLRATQYFYLASYFKNVPLVENVLTGEEANNVTKTSQADI 166 (528)
T ss_dssp HHHHHHHHHHHHHHHHHTTS--CCCHHHHHHH----HHHHHHHHHHHHHHHHHTCSBCCCCSCCCHHHHTTCCCBCHHHH
T ss_pred HHHHHHHHHHHHHHHhhhcc--CCHHHHHHHH----HHHHHHHHHHHHHHHHHcCCcceeCCCCCccccccCCCCCHHHH
Q ss_pred HHHHHHHHHHHHHhCC-------------CCHHHHHHHHHHHHHcCChHHHHHHHHHHHH
Q psy6102 342 YKRAINLCDDILLMEP-------------NNVKALFRRGRAQVSMNNFEQGLQDYEQALD 388 (426)
Q Consensus 342 ~~~Ai~~~~~AL~ldp-------------~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~ 388 (426)
++..+++++.|+.+=| +..-|+-.+|.+|+..+++++|.+..++++.
T Consensus 167 ~~~I~~DL~~A~~~Lp~~~~~~~~~~gr~tk~aA~allarv~L~~~~~~~A~~~a~~vi~ 226 (528)
T 3i4g_A 167 LKWCVTEFTAAAADLPRFSAIPAGEAGRACKQAALAFLGRTCMLQKDWKSGAKAFHDIME 226 (528)
T ss_dssp HHHHHHHHHHHHHHSCCGGGCCGGGTTSCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCccccCCcccCCcCcHHHHHHHHHHHHHHHhHHHHHHHHHHHHHh
No 360
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=29.02 E-value=97 Score=30.60 Aligned_cols=55 Identities=18% Similarity=0.137 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q psy6102 292 MHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILL 354 (426)
Q Consensus 292 y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ 354 (426)
|+..+..++.|+..++... ..-......++..+|.+|+.+++|++|+..++++|.
T Consensus 164 y~~I~~DL~~A~~~L~~~~--------~~gr~tk~aa~allarvyL~~~~~~~A~~~a~~vi~ 218 (454)
T 3myv_A 164 YDFIIETLEEAVTLMSEEK--------NNGRMNKYAARALLARIYLYHDDNRKAFDLADQLIK 218 (454)
T ss_dssp HHHHHHHHHHHHHHCCCSC--------CTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccccc--------cCCeecHHHHHHHHHHHHHhcccHHHHHHHHHHHHh
Confidence 4555556666666654211 111456667889999999999999999999999985
No 361
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=28.98 E-value=1e+02 Score=30.81 Aligned_cols=60 Identities=12% Similarity=0.095 Sum_probs=41.6
Q ss_pred hHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Q psy6102 291 RMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLM 355 (426)
Q Consensus 291 ~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~l 355 (426)
=|+.-+..+..|+..++.... ....-......++..+|.+|+.+++|++|+..++++|..
T Consensus 173 vy~~I~~DL~~A~~~Lp~~~~-----~~~~gr~tk~aA~allArvyL~~~~~~~A~~~a~~vi~~ 232 (495)
T 3lew_A 173 VYAQSINDLEEALELIPETYV-----RDAKHKIDNEVVLGILSRACLYARQWEKAKTYSDKLLAK 232 (495)
T ss_dssp HHHHHHHHHHHHHHHSCTTCC-----CSSTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcccccC-----cccCCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 355566666777776542110 001113566778899999999999999999999999864
No 362
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=28.28 E-value=1.5e+02 Score=25.11 Aligned_cols=71 Identities=11% Similarity=0.087 Sum_probs=45.3
Q ss_pred HHHHHhccchhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHH-HHHHHHHHHccCHHHHHHHHHHHHH
Q psy6102 276 IRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAAL-LNMAAVQLKFKAYKRAINLCDDILL 354 (426)
Q Consensus 276 a~~~~~~G~~~f~~g~y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~-~nlA~~~~~lg~~~~Ai~~~~~AL~ 354 (426)
...-+..|..+|..|+|-+|-+.++.+....+... +.. .-....+. ..-|..+++.|+...|...+.+|+.
T Consensus 32 ~~~~~~~~i~lFn~g~yfeaHEvLEe~W~~~~~~~------~er--~~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al~ 103 (161)
T 2ijq_A 32 LRRAVVHGVRLYNSGEFHESHDCFEDEWYNYGRGN------TES--KFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSLQ 103 (161)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHTTTTCSSS------HHH--HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHhCCCchHHHHHHHHHHHhcCCCc------hHH--HHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 33456788889999999999888887765421000 000 00112233 3445566778999999999999986
No 363
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=27.97 E-value=1e+02 Score=30.54 Aligned_cols=55 Identities=13% Similarity=0.112 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q psy6102 292 MHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILL 354 (426)
Q Consensus 292 y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ 354 (426)
|+.-+..++.|+..++... ..-......++..+|.+|+.+++|++|+..++++|.
T Consensus 170 y~~I~~DL~~A~~~L~~~~--------~~gr~tk~aa~allArvyL~~~~~~~A~~~a~~vi~ 224 (461)
T 3kez_A 170 YTEIISDLKNSTELLSGDF--------NKGKVNRWAAMTLLSRVYLYKGEYNEALTMAENAIK 224 (461)
T ss_dssp HHHHHHHHHHHHHHSCCSC--------CTTSCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcccc--------CCCeeeHHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 4455555666666654211 112456677889999999999999999999999986
No 364
>4b4t_O 26S proteasome regulatory subunit RPN9; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=27.64 E-value=2.5e+02 Score=27.11 Aligned_cols=102 Identities=10% Similarity=-0.046 Sum_probs=62.7
Q ss_pred hhhhhHHHHHHHHHHHHHHHHhhcccch-hhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHHHh-------CC-
Q psy6102 287 FKLNRMHDAQRKYKKAVRYIKWYNQSQS-KTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLM-------EP- 357 (426)
Q Consensus 287 f~~g~y~~Ai~~y~kAl~~~~~~~~~~~-~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~l-------dp- 357 (426)
-+..+.++|+....+....+........ .............+...++..|+..++..+|...++++-.+ +|
T Consensus 87 ~~~~d~~~al~~L~~~~~~~~~~~~~~~~~~~~~~~~ea~l~i~~~i~~~yl~~~d~~~a~~~l~~~~~~l~~~~~~~~~ 166 (393)
T 4b4t_O 87 KDSKDFDESLKYLDDLKAQFQELDSKKQRNNGSKDHGDGILLIDSEIARTYLLKNDLVKARDLLDDLEKTLDKKDSIPLR 166 (393)
T ss_dssp HHTTCHHHHHHHHHHHTTTSHHHHSSCCCCCCSSSSCCSHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHSCCSSSH
T ss_pred hhcCCHHHHHHHHHHHHHHHhhhhhhhhcccchhhhhhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhhccCCccHH
Confidence 3456778888877766443221111000 00011112344567788899999999999999988887542 22
Q ss_pred CCHHHHHHHHHHHHHcCChHHHHHHHHHHHH
Q psy6102 358 NNVKALFRRGRAQVSMNNFEQGLQDYEQALD 388 (426)
Q Consensus 358 ~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~ 388 (426)
-+...|...+..+...+++..+..+.-.++.
T Consensus 167 v~~~~y~~~~~~~~~~~~~a~~y~~~l~~l~ 197 (393)
T 4b4t_O 167 ITNSFYSTNSQYFKFKNDFNSFYYTSLLYLS 197 (393)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHh
Confidence 1244455566677888999888877666665
No 365
>3otn_A SUSD superfamily protein; putative outer membrane protein, carbohydrate binding, structural genomics; HET: MSE; 1.95A {Parabacteroides distasonis}
Probab=26.93 E-value=1.7e+02 Score=29.00 Aligned_cols=48 Identities=4% Similarity=-0.108 Sum_probs=35.4
Q ss_pred HH-HHHHHHHHHHHh-CC--------CCHHHHHHHHHHHHHcC---------ChHHHHHHHHHHHHh
Q psy6102 342 YK-RAINLCDDILLM-EP--------NNVKALFRRGRAQVSMN---------NFEQGLQDYEQALDL 389 (426)
Q Consensus 342 ~~-~Ai~~~~~AL~l-dp--------~~~kal~~lg~a~~~lg---------~~~~Al~~l~kAl~l 389 (426)
|+ ..+++++.|+.+ -| +..-|+-.+|.+|+..+ ++++|++..++++..
T Consensus 160 y~~~I~~DL~~A~~~~Lp~~~~~gr~tk~aA~allarvyL~~~~~~~~~~~~~~~~A~~~a~~vi~~ 226 (482)
T 3otn_A 160 YDEIIIPDLLEAEQSDLAFSDHTGRVSMGAVKALLADVYLTYAGYPLQGGKSYYAESAKRSLEVIKS 226 (482)
T ss_dssp HHHTHHHHHHHHHTSCCCSCCSSSCCCHHHHHHHHHHHHHHHHSTTTCCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHcCCCCcCcCCcCcHHHHHHHHHHHHHHhCCCcccCcHHHHHHHHHHHHHHHcc
Confidence 45 566777777775 33 22557778888888877 899999999988863
No 366
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=26.80 E-value=1.2e+02 Score=30.02 Aligned_cols=48 Identities=15% Similarity=0.115 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHHhCCC--------CHHHHHHHHHHHHHcCChHHHHHHHHHHHHh
Q psy6102 342 YKRAINLCDDILLMEPN--------NVKALFRRGRAQVSMNNFEQGLQDYEQALDL 389 (426)
Q Consensus 342 ~~~Ai~~~~~AL~ldp~--------~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l 389 (426)
|+..+++++.|+.+-|. ..-|+-.+|.+|+.+++|++|++..++++..
T Consensus 170 y~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allArvyL~~~~~~~A~~~a~~vi~~ 225 (461)
T 3kez_A 170 YTEIISDLKNSTELLSGDFNKGKVNRWAAMTLLSRVYLYKGEYNEALTMAENAIKG 225 (461)
T ss_dssp HHHHHHHHHHHHHHSCCSCCTTSCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCccccCCCeeeHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 45566677777665443 2567888999999999999999999999863
No 367
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=26.76 E-value=2.6e+02 Score=23.54 Aligned_cols=60 Identities=5% Similarity=0.040 Sum_probs=46.1
Q ss_pred HHHHHHHHHccCHHHHHHHHHHHHHhCCCC------HHHHHH-HHHHH--HHcCChHHHHHHHHHHHHh
Q psy6102 330 LNMAAVQLKFKAYKRAINLCDDILLMEPNN------VKALFR-RGRAQ--VSMNNFEQGLQDYEQALDL 389 (426)
Q Consensus 330 ~nlA~~~~~lg~~~~Ai~~~~~AL~ldp~~------~kal~~-lg~a~--~~lg~~~~Al~~l~kAl~l 389 (426)
+..+..++..|+|-+|=+.++.+-.-.+.. ...+.. +|.++ ...|+...|...+.+|+..
T Consensus 36 ~~~~i~lFn~g~yfeaHEvLEe~W~~~~~~~~er~~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al~~ 104 (161)
T 2ijq_A 36 VVHGVRLYNSGEFHESHDCFEDEWYNYGRGNTESKFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSLQY 104 (161)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHTTTTCSSSHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCchHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 445667778899999999998888776544 456666 65554 4569999999999999873
No 368
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=25.79 E-value=1.4e+02 Score=29.85 Aligned_cols=48 Identities=23% Similarity=0.234 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHHHhCCC-----------CHHHHHHHHHHHHHcCChHHHHHHHHHHHHh
Q psy6102 342 YKRAINLCDDILLMEPN-----------NVKALFRRGRAQVSMNNFEQGLQDYEQALDL 389 (426)
Q Consensus 342 ~~~Ai~~~~~AL~ldp~-----------~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l 389 (426)
|+..+++++.|+.+-|. ..-|+-.+|.+|+.++++++|+...++++..
T Consensus 174 y~~I~~DL~~A~~~Lp~~~~~~~~gr~tk~aA~allArvyL~~~~~~~A~~~a~~vi~~ 232 (495)
T 3lew_A 174 YAQSINDLEEALELIPETYVRDAKHKIDNEVVLGILSRACLYARQWEKAKTYSDKLLAK 232 (495)
T ss_dssp HHHHHHHHHHHHHHSCTTCCCSSTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccccCcccCCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 45556666666655432 2457888999999999999999999999875
No 369
>4gq4_A Menin; tumor suppressor, nucleus, transcription-transcription inhib complex; HET: 0RT EPE PE4; 1.27A {Homo sapiens} PDB: 4gq3_A* 4gpq_A* 4gq6_A*
Probab=25.00 E-value=1.2e+02 Score=29.97 Aligned_cols=31 Identities=10% Similarity=0.100 Sum_probs=20.4
Q ss_pred cchHHHHHHHHHHHHHccCHHHHHHHHHHHH
Q psy6102 323 SYYTAALLNMAAVQLKFKAYKRAINLCDDIL 353 (426)
Q Consensus 323 p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL 353 (426)
....--|..+|-++++.++|.+|+..+..|-
T Consensus 300 ~~hvYPYtYlgG~~~R~~~~~eAl~~wa~aa 330 (489)
T 4gq4_A 300 DEHIYPYMYLAGYHCRNRNVREALQAWADTA 330 (489)
T ss_dssp TCCSHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred cCcccceeecchHHHHhhhHHHHHHHhhhhh
Confidence 3334456666777777777777777776654
No 370
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=24.63 E-value=1.3e+02 Score=29.82 Aligned_cols=48 Identities=10% Similarity=0.119 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHHHhCCC--------CHHHHHHHHHHHHHcCChHHHHHHHHHHHHh
Q psy6102 342 YKRAINLCDDILLMEPN--------NVKALFRRGRAQVSMNNFEQGLQDYEQALDL 389 (426)
Q Consensus 342 ~~~Ai~~~~~AL~ldp~--------~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l 389 (426)
|+..+++++.|+.+-|. ..-|+-.+|.+|+.+++|++|++..++++..
T Consensus 176 y~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allarvyL~~~~~~~A~~~a~~vi~~ 231 (477)
T 3mcx_A 176 YEQVVSDMSNALSGLRQETSNGYINYWAAQALLSRVYLNMGEYQKAYDAATDVIKN 231 (477)
T ss_dssp HHHHHHHHHHHGGGSCSSCCTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcccccCCcCcHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhC
Confidence 45667777777765443 2557888899999999999999999999875
No 371
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=24.23 E-value=2.3e+02 Score=21.33 Aligned_cols=15 Identities=13% Similarity=0.014 Sum_probs=6.8
Q ss_pred HHHHHHHHHhCCCcH
Q psy6102 380 LQDYEQALDLLPNDQ 394 (426)
Q Consensus 380 l~~l~kAl~l~P~n~ 394 (426)
++.|..++...|+..
T Consensus 42 ie~l~~alk~e~~~~ 56 (93)
T 1wfd_A 42 IDMLLQVLKGTKESS 56 (93)
T ss_dssp HHHHHHHHHTCCCHH
T ss_pred HHHHHHHHHHCCCHH
Confidence 334444444455443
No 372
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=24.12 E-value=1.8e+02 Score=26.19 Aligned_cols=54 Identities=17% Similarity=0.169 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHH-HccCHHHHHHHHHHHH
Q psy6102 292 MHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQL-KFKAYKRAINLCDDIL 353 (426)
Q Consensus 292 y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~-~lg~~~~Ai~~~~~AL 353 (426)
-+.|...|++|.++.... ..--+|....+..|.+.-|+ -+++.++|++.+++|+
T Consensus 149 ~e~a~~aY~~A~~iA~~~--------L~pthPirLGLaLNfSVFyyEiln~~~~Ac~lAk~Af 203 (236)
T 3iqu_A 149 IDSARSAYQEAMDISKKE--------MPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTF 203 (236)
T ss_dssp HHHHHHHHHHHHHHHHHH--------SCTTCHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhh--------CCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 456777788887763211 11114455556666666555 3577777777766665
No 373
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=23.91 E-value=1.4e+02 Score=21.70 Aligned_cols=34 Identities=9% Similarity=0.194 Sum_probs=28.3
Q ss_pred HHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHH
Q psy6102 330 LNMAAVQLKFKAYKRAINLCDDILLMEPNNVKAL 363 (426)
Q Consensus 330 ~nlA~~~~~lg~~~~Ai~~~~~AL~ldp~~~kal 363 (426)
..+|..++..|++++|+..+-+||...|.=.+.+
T Consensus 21 V~~GE~L~~~g~~~~~~~hf~nAl~Vc~qP~~LL 54 (73)
T 3ax2_A 21 IQLGEELLAQGDYEKGVDHLTNAIAVCGQPQQLL 54 (73)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTCSSCHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHcCCHHHHH
Confidence 4678889999999999999999999988655543
No 374
>2wb7_A PT26-6P; extra chromosomal elements, unknown function; 2.60A {Thermococcus SP}
Probab=23.82 E-value=4.8e+02 Score=26.27 Aligned_cols=19 Identities=21% Similarity=0.246 Sum_probs=12.0
Q ss_pred HHHHHHHHHHHHHHHHhhc
Q psy6102 292 MHDAQRKYKKAVRYIKWYN 310 (426)
Q Consensus 292 y~~Ai~~y~kAl~~~~~~~ 310 (426)
-++|+.+|++|++.+....
T Consensus 448 A~kAi~~Y~~Ai~~L~k~~ 466 (526)
T 2wb7_A 448 AQGAIDEYKAAINDLQKAA 466 (526)
T ss_dssp HHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHhhh
Confidence 4567777777777655443
No 375
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=23.81 E-value=1.7e+02 Score=27.06 Aligned_cols=58 Identities=14% Similarity=0.231 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHH-HccCHHHHHHHHHHHHHh
Q psy6102 292 MHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQL-KFKAYKRAINLCDDILLM 355 (426)
Q Consensus 292 y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~-~lg~~~~Ai~~~~~AL~l 355 (426)
-+.|...|++|.++..... +..--+|....+..|.+.-|+ -+++.++|++.+++|+.-
T Consensus 168 ~e~a~~aYq~A~eiA~~~L------~~~pThPiRLGLaLNfSVFyYEIln~p~~Ac~lAk~AFde 226 (268)
T 3efz_A 168 IKQAVEFYEDALQRERSFL------EKYPSDPLYLATILNYTILKYDLLGNPEGAMKFANRAIQA 226 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHC------TTGGGCHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhc------CCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 5678888999988742110 001226666777778877777 478999999988888754
No 376
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=23.69 E-value=5.1e+02 Score=25.15 Aligned_cols=61 Identities=11% Similarity=0.172 Sum_probs=43.0
Q ss_pred HHHHHHHHHHh-----CCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHh------CCCcHHHHHHHHHHHH
Q psy6102 345 AINLCDDILLM-----EPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDL------LPNDQQILKEIAFVRK 405 (426)
Q Consensus 345 Ai~~~~~AL~l-----dp~~~kal~~lg~a~~~lg~~~~Al~~l~kAl~l------~P~n~~a~~~l~~i~~ 405 (426)
++..|.+|+.. ...+.-.|..+|-.+++.+++.+|++++-.|-.. .-+|.++.+.+-.+..
T Consensus 276 ~l~L~~~AI~sa~~yY~n~HvYPYtylgGy~yR~~~~reAl~~WA~Aa~Vi~~YNY~reDeEIYKEf~eIAn 347 (472)
T 3re2_A 276 AEELFKEAITVAKREYSDHHIYPYTYLGGYYYRKKKYYEAIASWVDAGYVAGKYNYSKDDEEMYKEFHEIAN 347 (472)
T ss_dssp HHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCCCGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCCccchhhhhhhhhhcchHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHH
Confidence 45555555533 4567778888999999999999999999887552 3456677666655543
No 377
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=23.62 E-value=2.4e+02 Score=21.52 Aligned_cols=28 Identities=14% Similarity=0.230 Sum_probs=13.6
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHH
Q psy6102 326 TAALLNMAAVQLKFKAYKRAINLCDDIL 353 (426)
Q Consensus 326 ~~~~~nlA~~~~~lg~~~~Ai~~~~~AL 353 (426)
++....-|.-+++.++|.+|+..++++.
T Consensus 53 ~r~~i~eak~~y~~~ny~ea~~l~~k~~ 80 (106)
T 2vkj_A 53 ARSLIAEGKDLFETANYGEALVFFEKAL 80 (106)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcchhHHHHHHHHHH
Confidence 3344444444455555555555555554
No 378
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=22.23 E-value=1.2e+02 Score=30.09 Aligned_cols=34 Identities=24% Similarity=0.297 Sum_probs=30.0
Q ss_pred CcchHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Q psy6102 322 RSYYTAALLNMAAVQLKFKAYKRAINLCDDILLM 355 (426)
Q Consensus 322 ~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~l 355 (426)
......++..+|.+|+.+++|++|++.++++|..
T Consensus 198 r~tk~aa~allarvyL~~~~~~~A~~~a~~vi~~ 231 (477)
T 3mcx_A 198 YINYWAAQALLSRVYLNMGEYQKAYDAATDVIKN 231 (477)
T ss_dssp SCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cCcHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhC
Confidence 4566678899999999999999999999999964
No 379
>2ca5_A MXIH; transport protein, type III secretion system, needle complex, protein transport, virulence; 2.10A {Shigella flexneri} SCOP: a.2.20.1 PDB: 2v6l_0 3j0r_A
Probab=21.94 E-value=2.3e+02 Score=21.21 Aligned_cols=30 Identities=20% Similarity=0.129 Sum_probs=15.8
Q ss_pred HHHHHHHHHHHHhCCCcHHHHHHHHHHHHH
Q psy6102 377 EQGLQDYEQALDLLPNDQQILKEIAFVRKQ 406 (426)
Q Consensus 377 ~~Al~~l~kAl~l~P~n~~a~~~l~~i~~~ 406 (426)
.+++..-.++|+.+|+|+..+..++.....
T Consensus 27 ~~~v~~Ai~~L~~~PsnPa~LAeyQ~kl~e 56 (85)
T 2ca5_A 27 QGELTLALDKLAKNPSNPQLLAEYQSKLSE 56 (85)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHHHHHH
Confidence 344444445555666666655555544443
No 380
>3hdx_A SUSD homolog, SUSD superfamily protein; NP_809182.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides thetaiotaomicron vpi-5482}
Probab=21.73 E-value=1.6e+02 Score=29.21 Aligned_cols=34 Identities=15% Similarity=-0.089 Sum_probs=30.2
Q ss_pred CcchHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Q psy6102 322 RSYYTAALLNMAAVQLKFKAYKRAINLCDDILLM 355 (426)
Q Consensus 322 ~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~l 355 (426)
......++..+|.+|+.+++|++|+..++++|..
T Consensus 193 r~tk~aA~allarvyL~~~~~~~A~~~a~~vi~~ 226 (478)
T 3hdx_A 193 LFNKLSAYSVLAHICAWQGNYAEAETYSAFIIDH 226 (478)
T ss_dssp SCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhC
Confidence 4566778999999999999999999999999964
No 381
>3qnk_A Putative lipoprotein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG, protein structure initiative; 2.70A {Bacteroides fragilis}
Probab=21.44 E-value=1.5e+02 Score=29.66 Aligned_cols=59 Identities=20% Similarity=0.174 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHHHHHHhhcccchhhhhhhcCcchHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Q psy6102 292 MHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLM 355 (426)
Q Consensus 292 y~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~p~~~~~~~nlA~~~~~lg~~~~Ai~~~~~AL~l 355 (426)
|+.-+..++.|+..++.... ....-......++..+|.+|+..++|++|+..+++++..
T Consensus 153 ~~~I~~dL~~A~~~Lp~~~~-----~~~~gr~tk~aA~allarv~L~~~~~~~A~~~a~~vi~~ 211 (517)
T 3qnk_A 153 YDFILEDLKKATEMLPASYG-----SREKGRATKGAAYALKSRVELYDKRYEDVIKSCAEVYKL 211 (517)
T ss_dssp HHHHHHHHHHHHHHSCSCCC-----STTTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhCccccC-----CcccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 44455556666666542100 011114566678999999999999999999999999963
No 382
>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP}
Probab=26.32 E-value=21 Score=37.75 Aligned_cols=53 Identities=17% Similarity=0.262 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHH
Q psy6102 327 AALLNMAAVQLKFKAYKRAINLCDDILLMEPNNVKALFRRGRAQVSMNNFEQG 379 (426)
Q Consensus 327 ~~~~nlA~~~~~lg~~~~Ai~~~~~AL~ldp~~~kal~~lg~a~~~lg~~~~A 379 (426)
.....+|...+..|+|..|.+.++.++..+|+|.+|...++.+|..+|.-.+.
T Consensus 462 ~~~~~~a~~~~~~g~~~wa~~l~~~~~~a~p~~~~ar~l~a~~~~~l~~~~~~ 514 (668)
T 2yhe_A 462 DAVLKQMRAAIDKGDYRWAVQLGNHLVFADPANKDARALQADAMEQLGYQTEN 514 (668)
Confidence 35666788888999999999999999999999999999999999999877664
No 383
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=20.47 E-value=2.6e+02 Score=20.47 Aligned_cols=17 Identities=24% Similarity=0.542 Sum_probs=8.4
Q ss_pred HcCChHHHHHHHHHHHH
Q psy6102 372 SMNNFEQGLQDYEQALD 388 (426)
Q Consensus 372 ~lg~~~~Al~~l~kAl~ 388 (426)
..|+|++|+..|..|++
T Consensus 25 ~~g~y~eAl~~Y~~aie 41 (85)
T 2v6x_A 25 TATQYEEAYTAYYNGLD 41 (85)
T ss_dssp HTTCHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHH
Confidence 34555555555554444
Done!