BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6104
(118 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q03720|SLO_DROME Calcium-activated potassium channel slowpoke OS=Drosophila
melanogaster GN=slo PE=1 SV=3
Length = 1200
Score = 170 bits (431), Expect = 2e-42, Method: Composition-based stats.
Identities = 77/93 (82%), Positives = 84/93 (90%), Gaps = 1/93 (1%)
Query: 23 DIDICLQERKWWCFLLSSIFTFILGLVIVLLWRLFAFICCRKEPELSPNDPKQKEQKAIR 82
D D CL+ RK+WCFLLSSIFTF+ GL++VLLWR FAF+CCRKEP+L PNDPKQKEQKA R
Sbjct: 39 DADDCLKVRKYWCFLLSSIFTFLAGLLVVLLWRAFAFVCCRKEPDLGPNDPKQKEQKASR 98
Query: 83 QGKQEFEGTFMTEAKDWAGELISGQTTTGRILV 115
KQEFEGTFMTEAKDWAGELISGQTTTGRILV
Sbjct: 99 N-KQEFEGTFMTEAKDWAGELISGQTTTGRILV 130
>sp|Q95V25|SLO1_CAEEL Calcium-activated potassium channel slo-1 OS=Caenorhabditis elegans
GN=slo-1 PE=1 SV=2
Length = 1140
Score = 91.7 bits (226), Expect = 1e-18, Method: Composition-based stats.
Identities = 49/111 (44%), Positives = 63/111 (56%), Gaps = 29/111 (26%)
Query: 27 CLQERKWWCFLLSSIFTFILGLVIVLLWRLFAFICC-RKEPEL----------------- 68
CL+ERK+WCFLLSSI TF +++V++WR+ +CC R+E E
Sbjct: 39 CLEERKYWCFLLSSITTFCASMILVVIWRVVTHLCCQRREKEFVEPIPAPEAVQINMNGS 98
Query: 69 ----SPNDPKQKEQKAIRQGKQEFEGTFMTEAKDWAGELISGQTTTGRILV 115
S DP K+Q+ G +MTEAKDWAGELISGQ+ TGR LV
Sbjct: 99 KHAPSETDPFLKQQEEKHLG-------WMTEAKDWAGELISGQSLTGRFLV 142
>sp|Q62976|KCMA1_RAT Calcium-activated potassium channel subunit alpha-1 OS=Rattus
norvegicus GN=Kcnma1 PE=1 SV=3
Length = 1209
Score = 72.8 bits (177), Expect = 5e-13, Method: Composition-based stats.
Identities = 41/105 (39%), Positives = 52/105 (49%), Gaps = 26/105 (24%)
Query: 30 ERKWWCFLLSSIFTFILGLVIVLLWRLFAF---ICCRKEPELSPNDPKQKEQKAIRQGKQ 86
+R WW FL SS+ TF GL I+LLWR + +CC K KE + I G
Sbjct: 85 QRMWWAFLASSMVTFFGGLFIILLWRTLKYLWTVCCH-------CGGKTKEAQKINNGSS 137
Query: 87 EFEGT----------------FMTEAKDWAGELISGQTTTGRILV 115
+ +GT +MT KDWAG +IS QT TGR+LV
Sbjct: 138 QADGTLKPVDEKEEVVAAEVGWMTSVKDWAGVMISAQTLTGRVLV 182
>sp|Q08460|KCMA1_MOUSE Calcium-activated potassium channel subunit alpha-1 OS=Mus musculus
GN=Kcnma1 PE=1 SV=2
Length = 1209
Score = 72.8 bits (177), Expect = 5e-13, Method: Composition-based stats.
Identities = 41/105 (39%), Positives = 52/105 (49%), Gaps = 26/105 (24%)
Query: 30 ERKWWCFLLSSIFTFILGLVIVLLWRLFAF---ICCRKEPELSPNDPKQKEQKAIRQGKQ 86
+R WW FL SS+ TF GL I+LLWR + +CC K KE + I G
Sbjct: 84 QRMWWAFLASSMVTFFGGLFIILLWRTLKYLWTVCCH-------CGGKTKEAQKINNGSS 136
Query: 87 EFEGT----------------FMTEAKDWAGELISGQTTTGRILV 115
+ +GT +MT KDWAG +IS QT TGR+LV
Sbjct: 137 QADGTLKPVDEKEEVVAAEVGWMTSVKDWAGVMISAQTLTGRVLV 181
>sp|Q9BG98|KCMA1_RABIT Calcium-activated potassium channel subunit alpha-1 OS=Oryctolagus
cuniculus GN=KCNMA1 PE=2 SV=1
Length = 1179
Score = 72.8 bits (177), Expect = 6e-13, Method: Composition-based stats.
Identities = 41/105 (39%), Positives = 52/105 (49%), Gaps = 26/105 (24%)
Query: 30 ERKWWCFLLSSIFTFILGLVIVLLWRLFAF---ICCRKEPELSPNDPKQKEQKAIRQGKQ 86
+R WW FL SS+ TF GL I+LLWR + +CC K KE + I G
Sbjct: 85 QRMWWAFLASSMVTFFGGLFIILLWRTLKYLWTVCCH-------CGGKAKEAQKINNGSS 137
Query: 87 EFEGT----------------FMTEAKDWAGELISGQTTTGRILV 115
+ +GT +MT KDWAG +IS QT TGR+LV
Sbjct: 138 QADGTLKPVDEKEEAVAAEVGWMTSVKDWAGVMISAQTLTGRVLV 182
>sp|Q28265|KCMA1_CANFA Calcium-activated potassium channel subunit alpha-1 (Fragment)
OS=Canis familiaris GN=KCNMA1 PE=2 SV=2
Length = 1159
Score = 72.8 bits (177), Expect = 6e-13, Method: Composition-based stats.
Identities = 41/105 (39%), Positives = 52/105 (49%), Gaps = 26/105 (24%)
Query: 30 ERKWWCFLLSSIFTFILGLVIVLLWRLFAF---ICCRKEPELSPNDPKQKEQKAIRQGKQ 86
+R WW FL SS+ TF GL I+LLWR + +CC K KE + I G
Sbjct: 22 QRMWWAFLASSMVTFFGGLFIILLWRTLKYLWTVCCH-------CGDKTKEAQKINNGSS 74
Query: 87 EFEGT----------------FMTEAKDWAGELISGQTTTGRILV 115
+ +GT +MT KDWAG +IS QT TGR+LV
Sbjct: 75 QADGTLKPVDEKEEAVAAEVGWMTSVKDWAGVMISAQTLTGRVLV 119
>sp|O18867|KCMA1_MACMU Calcium-activated potassium channel subunit alpha-1 (Fragment)
OS=Macaca mulatta GN=KCNMA1 PE=2 SV=1
Length = 1151
Score = 72.8 bits (177), Expect = 6e-13, Method: Composition-based stats.
Identities = 41/105 (39%), Positives = 52/105 (49%), Gaps = 26/105 (24%)
Query: 30 ERKWWCFLLSSIFTFILGLVIVLLWRLFAF---ICCRKEPELSPNDPKQKEQKAIRQGKQ 86
+R WW FL SS+ TF GL I+LLWR + +CC K KE + I G
Sbjct: 57 QRMWWAFLASSMVTFFGGLFIILLWRTLKYLWTVCCH-------CGGKTKEAQKINNGSS 109
Query: 87 EFEGT----------------FMTEAKDWAGELISGQTTTGRILV 115
+ +GT +MT KDWAG +IS QT TGR+LV
Sbjct: 110 QADGTLKPVDEKEEAVAAEVGWMTSVKDWAGVMISAQTLTGRVLV 154
>sp|Q28204|KCMA1_BOVIN Calcium-activated potassium channel subunit alpha-1 OS=Bos taurus
GN=KCNMA1 PE=1 SV=2
Length = 1166
Score = 72.8 bits (177), Expect = 7e-13, Method: Composition-based stats.
Identities = 41/105 (39%), Positives = 52/105 (49%), Gaps = 26/105 (24%)
Query: 30 ERKWWCFLLSSIFTFILGLVIVLLWRLFAF---ICCRKEPELSPNDPKQKEQKAIRQGKQ 86
+R WW FL SS+ TF GL I+LLWR + +CC K KE + I G
Sbjct: 72 QRMWWAFLASSMVTFFGGLFIILLWRTLKYLWTVCCH-------CGGKTKEAQKINNGSS 124
Query: 87 EFEGT----------------FMTEAKDWAGELISGQTTTGRILV 115
+ +GT +MT KDWAG +IS QT TGR+LV
Sbjct: 125 QADGTLKPVDEKEETVAAEVGWMTSVKDWAGVMISAQTLTGRVLV 169
>sp|O18866|KCMA1_PIG Calcium-activated potassium channel subunit alpha-1 (Fragment)
OS=Sus scrofa GN=KCNMA1 PE=2 SV=2
Length = 1152
Score = 72.4 bits (176), Expect = 8e-13, Method: Composition-based stats.
Identities = 41/105 (39%), Positives = 52/105 (49%), Gaps = 26/105 (24%)
Query: 30 ERKWWCFLLSSIFTFILGLVIVLLWRLFAF---ICCRKEPELSPNDPKQKEQKAIRQGKQ 86
+R WW FL SS+ TF GL I+LLWR + +CC K KE + I G
Sbjct: 58 QRMWWAFLASSMVTFFGGLFIILLWRTLKYLWTVCCH-------CGGKTKEAQKINNGAS 110
Query: 87 EFEGT----------------FMTEAKDWAGELISGQTTTGRILV 115
+ +GT +MT KDWAG +IS QT TGR+LV
Sbjct: 111 QADGTLKPVDEKEEVVAAEVGWMTSVKDWAGVMISAQTLTGRVLV 155
>sp|Q12791|KCMA1_HUMAN Calcium-activated potassium channel subunit alpha-1 OS=Homo sapiens
GN=KCNMA1 PE=1 SV=2
Length = 1236
Score = 72.4 bits (176), Expect = 8e-13, Method: Composition-based stats.
Identities = 41/105 (39%), Positives = 52/105 (49%), Gaps = 26/105 (24%)
Query: 30 ERKWWCFLLSSIFTFILGLVIVLLWRLFAF---ICCRKEPELSPNDPKQKEQKAIRQGKQ 86
+R WW FL SS+ TF GL I+LLWR + +CC K KE + I G
Sbjct: 84 QRMWWAFLASSMVTFFGGLFIILLWRTLKYLWTVCCH-------CGGKTKEAQKINNGSS 136
Query: 87 EFEGT----------------FMTEAKDWAGELISGQTTTGRILV 115
+ +GT +MT KDWAG +IS QT TGR+LV
Sbjct: 137 QADGTLKPVDEKEEAVAAEVGWMTSVKDWAGVMISAQTLTGRVLV 181
>sp|Q8AYS8|KCMA1_CHICK Calcium-activated potassium channel subunit alpha-1 OS=Gallus
gallus GN=KCNMA1 PE=1 SV=2
Length = 1137
Score = 68.2 bits (165), Expect = 2e-11, Method: Composition-based stats.
Identities = 41/107 (38%), Positives = 52/107 (48%), Gaps = 29/107 (27%)
Query: 30 ERKWWCFLLSSIFTFILGLVIVLLWRLFAF---ICCR-----KEPE-------------L 68
+R WW FL SS+ TF GL I+LLWR + +CC KE +
Sbjct: 42 QRMWWAFLASSMVTFFGGLFIILLWRTLKYLWTVCCHCGVKNKEAQKINGGGDTQADGAC 101
Query: 69 SPNDPKQKEQKAIRQGKQEFEGTFMTEAKDWAGELISGQTTTGRILV 115
P D K++ A E +MT KDWAG +IS QT TGR+LV
Sbjct: 102 KPTDEKEENVAA--------EVGWMTSVKDWAGVMISAQTLTGRVLV 140
>sp|Q90ZC7|KCMA1_XENLA Calcium-activated potassium channel subunit alpha-1 OS=Xenopus
laevis GN=kcnma1 PE=2 SV=1
Length = 1196
Score = 67.0 bits (162), Expect = 3e-11, Method: Composition-based stats.
Identities = 40/110 (36%), Positives = 52/110 (47%), Gaps = 30/110 (27%)
Query: 31 RKWWCFLLSSIFTFILGLVIVLLWRLFAF---ICCR-------------------KEPEL 68
R WW FL SS+ TF GL I+L+WR F + +CC + +
Sbjct: 51 RMWWAFLASSMVTFFGGLFIILVWRTFKYLWTVCCHCGGKNKEAQKVVNVASSQVTDGDY 110
Query: 69 SPNDPKQKEQKAIRQGKQEFEGTFMTEAKDWAGELISGQTTTGRILVPNV 118
P D K++ A E +MT KDWAG +IS QT TGR+LV V
Sbjct: 111 KPTDDKEEVGVA--------EVGWMTSVKDWAGVMISAQTLTGRVLVVTV 152
>sp|Q06HQ7|PLB1_MONDO Phospholipase B1, membrane-associated OS=Monodelphis domestica
GN=PLB1 PE=2 SV=1
Length = 1474
Score = 31.6 bits (70), Expect = 1.4, Method: Composition-based stats.
Identities = 13/33 (39%), Positives = 23/33 (69%), Gaps = 2/33 (6%)
Query: 33 WWCFLLSSIFTFILGLVIVLLWRLFAFICCRKE 65
+W L+++ +FI+G+V+V+LWR C R+E
Sbjct: 1433 FWAVLVAAAASFIVGVVLVMLWRTKK--CSRRE 1463
>sp|P75041|Y076_MYCPN Uncharacterized protein MG061 homolog 1 OS=Mycoplasma pneumoniae
(strain ATCC 29342 / M129) GN=MPN_076 PE=4 SV=1
Length = 564
Score = 31.6 bits (70), Expect = 1.5, Method: Composition-based stats.
Identities = 14/68 (20%), Positives = 31/68 (45%), Gaps = 9/68 (13%)
Query: 32 KWWCFLLSSIFTFILGLVIVLLWRLFAFICCRKEPELSPNDPKQKEQKAIRQGKQEFEGT 91
K+W F+L+++ G++ V W E ++ P P+++ ++ ++ G Q G
Sbjct: 246 KYWVFILTALILIGFGILCVFAWF---------EKQMDPFMPQKQTKEQMQLGNQPSAGD 296
Query: 92 FMTEAKDW 99
+ W
Sbjct: 297 ILKRKATW 304
>sp|A6QL92|S35F5_BOVIN Solute carrier family 35 member F5 OS=Bos taurus GN=SLC35F5 PE=2
SV=1
Length = 524
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 14/81 (17%)
Query: 25 DICLQERKW-WCFLLSSI---FTFILGL----------VIVLLWRLFAFICCRKEPELSP 70
D+C+Q+ ++ W F +I F+F + V+V + R+FAFIC + + P
Sbjct: 443 DMCMQKVQFSWLFFAGAIPVFFSFFIATLLCHYNNWDPVMVGIRRIFAFICRKHRIQKVP 502
Query: 71 NDPKQKEQKAIRQGKQEFEGT 91
D +Q E G + +G
Sbjct: 503 EDSEQCESLIPMHGVSQEDGA 523
>sp|Q049Z9|RNH2_LACDB Ribonuclease HII OS=Lactobacillus delbrueckii subsp. bulgaricus
(strain ATCC BAA-365) GN=rnhB PE=3 SV=1
Length = 256
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 75 QKEQKAIRQGKQEFEGTFMTEAKDWA-GELISGQTTTGR 112
Q+ Q+ + + K+EF G F E WA G+L+ G GR
Sbjct: 39 QRRQEKLAKQKEEFLGRFSYEKDFWAKGQLVGGVDEVGR 77
>sp|Q1G9U8|RNH2_LACDA Ribonuclease HII OS=Lactobacillus delbrueckii subsp. bulgaricus
(strain ATCC 11842 / DSM 20081) GN=rnhB PE=3 SV=1
Length = 256
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 75 QKEQKAIRQGKQEFEGTFMTEAKDWA-GELISGQTTTGR 112
Q+ Q+ + + K+EF G F E WA G+L+ G GR
Sbjct: 39 QRRQEKLAKQKEEFLGRFSYEKDFWAKGQLVGGVDEVGR 77
>sp|Q5R6J3|S35F5_PONAB Solute carrier family 35 member F5 OS=Pongo abelii GN=SLC35F5 PE=2
SV=1
Length = 523
Score = 30.0 bits (66), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 14/68 (20%)
Query: 25 DICLQERKW-WCFLLSSIFTFILGLVIVLL-----W--------RLFAFICCRKEPELSP 70
D+C+Q+ ++ W F +I F ++ LL W R+FAFIC + + P
Sbjct: 442 DMCMQKVQFSWLFFAGAIPVFFSFFIVTLLCHYNNWDPVMVGIRRIFAFICRKHRIQRVP 501
Query: 71 NDPKQKEQ 78
D +Q E
Sbjct: 502 EDSEQCES 509
>sp|Q4R794|S35F5_MACFA Solute carrier family 35 member F5 OS=Macaca fascicularis
GN=SLC35F5 PE=2 SV=1
Length = 432
Score = 30.0 bits (66), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 14/68 (20%)
Query: 25 DICLQERKW-WCFLLSSIFTFILGLVIVLL-----W--------RLFAFICCRKEPELSP 70
D+C+Q+ ++ W F +I F ++ LL W R+FAFIC + + P
Sbjct: 351 DMCMQKVQFSWLFFAGAIPVFFSFFIVTLLCHYNNWDPVMVGIRRIFAFICRKHRIQRVP 410
Query: 71 NDPKQKEQ 78
D +Q E
Sbjct: 411 EDSEQCES 418
>sp|Q9C654|PUP22_ARATH Probable purine permease 22 OS=Arabidopsis thaliana GN=PUP22 PE=2
SV=1
Length = 394
Score = 30.0 bits (66), Expect = 4.9, Method: Composition-based stats.
Identities = 13/38 (34%), Positives = 23/38 (60%)
Query: 28 LQERKWWCFLLSSIFTFILGLVIVLLWRLFAFICCRKE 65
L ++KWW +L +F +LG +V+L F ++ R+E
Sbjct: 36 LNQKKWWISVLICLFLVLLGDSLVILLLNFFYVQDRRE 73
>sp|Q8WV83|S35F5_HUMAN Solute carrier family 35 member F5 OS=Homo sapiens GN=SLC35F5 PE=2
SV=1
Length = 523
Score = 30.0 bits (66), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 14/68 (20%)
Query: 25 DICLQERKW-WCFLLSSIFTFILGLVIVLL-----W--------RLFAFICCRKEPELSP 70
D+C+Q+ ++ W F +I F ++ LL W R+FAFIC + + P
Sbjct: 442 DMCMQKVQFSWLFFAGAIPVFFSFFIVTLLCHYNNWDPVMVGIRRIFAFICRKHRIQRVP 501
Query: 71 NDPKQKEQ 78
D +Q E
Sbjct: 502 EDSEQCES 509
>sp|Q8R314|S35F5_MOUSE Solute carrier family 35 member F5 OS=Mus musculus GN=Slc35f5 PE=2
SV=1
Length = 524
Score = 29.6 bits (65), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 14/68 (20%)
Query: 25 DICLQERKW-WCFLLSSIFTFILGLVIVLL-----W--------RLFAFICCRKEPELSP 70
D+C+Q+ ++ W F +I F ++ LL W R+FAFIC + + P
Sbjct: 443 DMCMQKVQFSWLFFAGAIPVFFSFFIVTLLCHYNNWDPVMVGVRRVFAFICRKHRIQRVP 502
Query: 71 NDPKQKEQ 78
D +Q E
Sbjct: 503 EDSEQCES 510
>sp|Q96JA4|M4A14_HUMAN Membrane-spanning 4-domains subfamily A member 14 OS=Homo sapiens
GN=MS4A14 PE=2 SV=2
Length = 679
Score = 29.6 bits (65), Expect = 5.8, Method: Composition-based stats.
Identities = 10/40 (25%), Positives = 21/40 (52%)
Query: 63 RKEPELSPNDPKQKEQKAIRQGKQEFEGTFMTEAKDWAGE 102
++ P+L P + + + Q+ ++ Q+ M E K+W E
Sbjct: 435 QQPPDLQPENTEPQNQQILQMSYQDIRSEVMEETKEWKSE 474
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.138 0.447
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,636,947
Number of Sequences: 539616
Number of extensions: 1540472
Number of successful extensions: 5068
Number of sequences better than 100.0: 29
Number of HSP's better than 100.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 5040
Number of HSP's gapped (non-prelim): 29
length of query: 118
length of database: 191,569,459
effective HSP length: 85
effective length of query: 33
effective length of database: 145,702,099
effective search space: 4808169267
effective search space used: 4808169267
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)