BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6108
(131 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 142 bits (359), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 74/142 (52%), Positives = 96/142 (67%), Gaps = 17/142 (11%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSV 63
L EEQI E+KEAFALFDK+G G I +K +GTVMR++G+NPTE EL+D++ EVD D G++
Sbjct: 4 LTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 64 DFESFLKLMANHIPNVDSTAELLEAFQVFDKD-----------------GEKLSDQEVDE 106
DF FL LMA + DS EL+EAF+VFD+D GEKL+D EVDE
Sbjct: 64 DFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDE 123
Query: 107 LIGLADENNTGHVRYEEFAKVM 128
+I AD + GH+ YEEF ++M
Sbjct: 124 MIREADIDGDGHINYEEFVRMM 145
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 42/64 (65%)
Query: 11 EWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVDFESFLK 70
E EAF +FD++G+G I + + VM +G T+ E++++++E D D G +++E F++
Sbjct: 84 ELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVR 143
Query: 71 LMAN 74
+M +
Sbjct: 144 MMVS 147
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 142 bits (359), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 74/142 (52%), Positives = 96/142 (67%), Gaps = 17/142 (11%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSV 63
L EEQI E+KEAFALFDK+G G I +K +GTVMR++G+NPTE EL+D++ EVD D G++
Sbjct: 4 LTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 64 DFESFLKLMANHIPNVDSTAELLEAFQVFDKD-----------------GEKLSDQEVDE 106
DF FL LMA + DS EL+EAF+VFD+D GEKL+D EVDE
Sbjct: 64 DFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDE 123
Query: 107 LIGLADENNTGHVRYEEFAKVM 128
+I AD + GH+ YEEF ++M
Sbjct: 124 MIREADIDGDGHINYEEFVRMM 145
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 42/64 (65%)
Query: 11 EWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVDFESFLK 70
E EAF +FD++G+G I + + VM +G T+ E++++++E D D G +++E F++
Sbjct: 84 ELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVR 143
Query: 71 LMAN 74
+M +
Sbjct: 144 MMVS 147
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 141 bits (355), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/143 (51%), Positives = 97/143 (67%), Gaps = 17/143 (11%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSV 63
L EEQI E+KEAF+LFDK+G G I +K +GTVMR++G+NPTE EL+D++ EVD D G++
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 64 DFESFLKLMANHIPNVDSTAELLEAFQVFDKD-----------------GEKLSDQEVDE 106
DF FL +MA + + DS E+ EAF+VFDKD GEKL+D+EVDE
Sbjct: 65 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 124
Query: 107 LIGLADENNTGHVRYEEFAKVMT 129
+I AD + G V YEEF ++MT
Sbjct: 125 MIREADIDGDGQVNYEEFVQMMT 147
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 141 bits (355), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/143 (51%), Positives = 97/143 (67%), Gaps = 17/143 (11%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSV 63
L EEQI E+KEAF+LFDK+G G I +K +GTVMR++G+NPTE EL+D++ EVD D G++
Sbjct: 6 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 65
Query: 64 DFESFLKLMANHIPNVDSTAELLEAFQVFDKD-----------------GEKLSDQEVDE 106
DF FL +MA + + DS E+ EAF+VFDKD GEKL+D+EVDE
Sbjct: 66 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 125
Query: 107 LIGLADENNTGHVRYEEFAKVMT 129
+I AD + G V YEEF ++MT
Sbjct: 126 MIREADIDGDGQVNYEEFVQMMT 148
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 140 bits (354), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/143 (51%), Positives = 97/143 (67%), Gaps = 17/143 (11%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSV 63
L EEQI E+KEAF+LFDK+G G I +K +GTVMR++G+NPTE EL+D++ EVD D G++
Sbjct: 8 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 67
Query: 64 DFESFLKLMANHIPNVDSTAELLEAFQVFDKD-----------------GEKLSDQEVDE 106
DF FL +MA + + DS E+ EAF+VFDKD GEKL+D+EVDE
Sbjct: 68 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 127
Query: 107 LIGLADENNTGHVRYEEFAKVMT 129
+I AD + G V YEEF ++MT
Sbjct: 128 MIREADIDGDGQVNYEEFVQMMT 150
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 140 bits (354), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/143 (51%), Positives = 97/143 (67%), Gaps = 17/143 (11%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSV 63
L EEQI E+KEAF+LFDK+G G I +K +GTVMR++G+NPTE EL+D++ EVD D G++
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 64 DFESFLKLMANHIPNVDSTAELLEAFQVFDKD-----------------GEKLSDQEVDE 106
DF FL +MA + + DS E+ EAF+VFDKD GEKL+D+EVDE
Sbjct: 65 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 124
Query: 107 LIGLADENNTGHVRYEEFAKVMT 129
+I AD + G V YEEF ++MT
Sbjct: 125 MIREADIDGDGQVNYEEFVQMMT 147
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 140 bits (354), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/143 (51%), Positives = 97/143 (67%), Gaps = 17/143 (11%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSV 63
L EEQI E+KEAF+LFDK+G G I +K +GTVMR++G+NPTE EL+D++ EVD D G++
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 64 DFESFLKLMANHIPNVDSTAELLEAFQVFDKD-----------------GEKLSDQEVDE 106
DF FL +MA + + DS E+ EAF+VFDKD GEKL+D+EVDE
Sbjct: 65 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 124
Query: 107 LIGLADENNTGHVRYEEFAKVMT 129
+I AD + G V YEEF ++MT
Sbjct: 125 MIREADIDGDGQVNYEEFVQMMT 147
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 140 bits (354), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/143 (51%), Positives = 97/143 (67%), Gaps = 17/143 (11%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSV 63
L EEQI E+KEAF+LFDK+G G I +K +GTVMR++G+NPTE EL+D++ EVD D G++
Sbjct: 10 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 69
Query: 64 DFESFLKLMANHIPNVDSTAELLEAFQVFDKD-----------------GEKLSDQEVDE 106
DF FL +MA + + DS E+ EAF+VFDKD GEKL+D+EVDE
Sbjct: 70 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 129
Query: 107 LIGLADENNTGHVRYEEFAKVMT 129
+I AD + G V YEEF ++MT
Sbjct: 130 MIREADIDGDGQVNYEEFVQMMT 152
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 140 bits (354), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/143 (51%), Positives = 97/143 (67%), Gaps = 17/143 (11%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSV 63
L EEQI E+KEAF+LFDK+G G I +K +GTVMR++G+NPTE EL+D++ EVD D G++
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 64 DFESFLKLMANHIPNVDSTAELLEAFQVFDKD-----------------GEKLSDQEVDE 106
DF FL +MA + + DS E+ EAF+VFDKD GEKL+D+EVDE
Sbjct: 64 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 123
Query: 107 LIGLADENNTGHVRYEEFAKVMT 129
+I AD + G V YEEF ++MT
Sbjct: 124 MIREADIDGDGQVNYEEFVQMMT 146
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 140 bits (354), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/143 (51%), Positives = 97/143 (67%), Gaps = 17/143 (11%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSV 63
L EEQI E+KEAF+LFDK+G G I +K +GTVMR++G+NPTE EL+D++ EVD D G++
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 64 DFESFLKLMANHIPNVDSTAELLEAFQVFDKD-----------------GEKLSDQEVDE 106
DF FL +MA + + DS E+ EAF+VFDKD GEKL+D+EVDE
Sbjct: 65 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 124
Query: 107 LIGLADENNTGHVRYEEFAKVMT 129
+I AD + G V YEEF ++MT
Sbjct: 125 MIREADIDGDGQVNYEEFVQMMT 147
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 140 bits (354), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/143 (51%), Positives = 97/143 (67%), Gaps = 17/143 (11%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSV 63
L EEQI E+KEAF+LFDK+G G I +K +GTVMR++G+NPTE EL+D++ EVD D G++
Sbjct: 3 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 62
Query: 64 DFESFLKLMANHIPNVDSTAELLEAFQVFDKD-----------------GEKLSDQEVDE 106
DF FL +MA + + DS E+ EAF+VFDKD GEKL+D+EVDE
Sbjct: 63 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 122
Query: 107 LIGLADENNTGHVRYEEFAKVMT 129
+I AD + G V YEEF ++MT
Sbjct: 123 MIREADIDGDGQVNYEEFVQMMT 145
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 140 bits (354), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/143 (51%), Positives = 97/143 (67%), Gaps = 17/143 (11%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSV 63
L EEQI E+KEAF+LFDK+G G I +K +GTVMR++G+NPTE EL+D++ EVD D G++
Sbjct: 2 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 61
Query: 64 DFESFLKLMANHIPNVDSTAELLEAFQVFDKD-----------------GEKLSDQEVDE 106
DF FL +MA + + DS E+ EAF+VFDKD GEKL+D+EVDE
Sbjct: 62 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 121
Query: 107 LIGLADENNTGHVRYEEFAKVMT 129
+I AD + G V YEEF ++MT
Sbjct: 122 MIREADIDGDGQVNYEEFVQMMT 144
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 140 bits (354), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/143 (51%), Positives = 97/143 (67%), Gaps = 17/143 (11%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSV 63
L EEQI E+KEAF+LFDK+G G I +K +GTVMR++G+NPTE EL+D++ EVD D G++
Sbjct: 2 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 61
Query: 64 DFESFLKLMANHIPNVDSTAELLEAFQVFDKD-----------------GEKLSDQEVDE 106
DF FL +MA + + DS E+ EAF+VFDKD GEKL+D+EVDE
Sbjct: 62 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 121
Query: 107 LIGLADENNTGHVRYEEFAKVMT 129
+I AD + G V YEEF ++MT
Sbjct: 122 MIREADIDGDGQVNYEEFVQMMT 144
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 140 bits (354), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/143 (51%), Positives = 97/143 (67%), Gaps = 17/143 (11%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSV 63
L EEQI E+KEAF+LFDK+G G I +K +GTVMR++G+NPTE EL+D++ EVD D G++
Sbjct: 1 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 60
Query: 64 DFESFLKLMANHIPNVDSTAELLEAFQVFDKD-----------------GEKLSDQEVDE 106
DF FL +MA + + DS E+ EAF+VFDKD GEKL+D+EVDE
Sbjct: 61 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 120
Query: 107 LIGLADENNTGHVRYEEFAKVMT 129
+I AD + G V YEEF ++MT
Sbjct: 121 MIREADIDGDGQVNYEEFVQMMT 143
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 140 bits (354), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/143 (51%), Positives = 97/143 (67%), Gaps = 17/143 (11%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSV 63
L EEQI E+KEAF+LFDK+G G I +K +GTVMR++G+NPTE EL+D++ EVD D G++
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 64 DFESFLKLMANHIPNVDSTAELLEAFQVFDKD-----------------GEKLSDQEVDE 106
DF FL +MA + + DS E+ EAF+VFDKD GEKL+D+EVDE
Sbjct: 64 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 123
Query: 107 LIGLADENNTGHVRYEEFAKVMT 129
+I AD + G V YEEF ++MT
Sbjct: 124 MIREADIDGDGQVNYEEFVQMMT 146
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 140 bits (353), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/143 (51%), Positives = 97/143 (67%), Gaps = 17/143 (11%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSV 63
L EEQI E+KEAF+LFDK+G G I +K +GTVMR++G+NPTE EL+D++ EVD D G++
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTI 63
Query: 64 DFESFLKLMANHIPNVDSTAELLEAFQVFDKD-----------------GEKLSDQEVDE 106
DF FL +MA + + DS E+ EAF+VFDKD GEKL+D+EVDE
Sbjct: 64 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 123
Query: 107 LIGLADENNTGHVRYEEFAKVMT 129
+I AD + G V YEEF ++MT
Sbjct: 124 MIREADIDGDGQVNYEEFVQMMT 146
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 140 bits (352), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/143 (51%), Positives = 96/143 (67%), Gaps = 17/143 (11%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSV 63
L EEQI E+KEAF+LFDK+G G I +K +GTVMR++G+NPTE EL+D++ EVD D G++
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 64 DFESFLKLMANHIPNVDSTAELLEAFQVFDKD-----------------GEKLSDQEVDE 106
DF FL +MA + + DS E+ EAF+VFDKD GEKL+D+EVDE
Sbjct: 64 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDE 123
Query: 107 LIGLADENNTGHVRYEEFAKVMT 129
+I AD + G V YEEF +MT
Sbjct: 124 MIREADIDGDGQVNYEEFVTMMT 146
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 140 bits (352), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/143 (51%), Positives = 96/143 (67%), Gaps = 17/143 (11%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSV 63
L EEQI E+KEAF+LFDK+G G I +K +GTVMR++G+NPTE EL+D++ EVD D G++
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 64 DFESFLKLMANHIPNVDSTAELLEAFQVFDKD-----------------GEKLSDQEVDE 106
DF FL +MA + + DS E+ EAF+VFDKD GEKL+D+EVDE
Sbjct: 64 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDE 123
Query: 107 LIGLADENNTGHVRYEEFAKVMT 129
+I AD + G V YEEF +MT
Sbjct: 124 MIREADIDGDGQVNYEEFVTMMT 146
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 43/64 (67%)
Query: 11 EWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVDFESFLK 70
E +EAF +FDK+G+G I + + VM +G T++E++++++E D D G V++E F+
Sbjct: 84 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVT 143
Query: 71 LMAN 74
+M +
Sbjct: 144 MMTS 147
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 140 bits (352), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/143 (51%), Positives = 96/143 (67%), Gaps = 17/143 (11%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSV 63
L EEQI E+KEAF+LFDK+G G I +K +GTVMR++G+NPTE EL+D++ EVD D G++
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 64 DFESFLKLMANHIPNVDSTAELLEAFQVFDKD-----------------GEKLSDQEVDE 106
DF FL +MA + + DS E+ EAF+VFDKD GEKL+D+EVDE
Sbjct: 65 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDE 124
Query: 107 LIGLADENNTGHVRYEEFAKVMT 129
+I AD + G V YEEF +MT
Sbjct: 125 MIREADIDGDGQVNYEEFVTMMT 147
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 43/64 (67%)
Query: 11 EWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVDFESFLK 70
E +EAF +FDK+G+G I + + VM +G T++E++++++E D D G V++E F+
Sbjct: 85 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVT 144
Query: 71 LMAN 74
+M +
Sbjct: 145 MMTS 148
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 140 bits (352), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/143 (51%), Positives = 96/143 (67%), Gaps = 17/143 (11%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSV 63
L EEQI E+KEAF+LFDK+G G I +K +GTVMR++G+NPTE EL+D++ EVD D G++
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 64 DFESFLKLMANHIPNVDSTAELLEAFQVFDKD-----------------GEKLSDQEVDE 106
DF FL +MA + + DS E+ EAF+VFDKD GEKL+D+EVDE
Sbjct: 65 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDE 124
Query: 107 LIGLADENNTGHVRYEEFAKVMT 129
+I AD + G V YEEF +MT
Sbjct: 125 MIREADIDGDGQVNYEEFVTMMT 147
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 140 bits (352), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 74/142 (52%), Positives = 96/142 (67%), Gaps = 17/142 (11%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSV 63
L +EQI E+KEAF+LFDK+G G I +K +GTVMR++G+NPTE EL+D++ EVD D G++
Sbjct: 4 LTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 64 DFESFLKLMANHIPNVDSTAELLEAFQVFDKD-----------------GEKLSDQEVDE 106
DF FL LMA + + DS EL EAF+VFDKD GEKL+D+EVDE
Sbjct: 64 DFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDE 123
Query: 107 LIGLADENNTGHVRYEEFAKVM 128
+I AD + G V YEEF +VM
Sbjct: 124 MIREADVDGDGQVNYEEFVQVM 145
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 140 bits (352), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 74/142 (52%), Positives = 96/142 (67%), Gaps = 17/142 (11%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSV 63
L +EQI E+KEAF+LFDK+G G I +K +GTVMR++G+NPTE EL+D++ EVD D G++
Sbjct: 1 LTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 60
Query: 64 DFESFLKLMANHIPNVDSTAELLEAFQVFDKD-----------------GEKLSDQEVDE 106
DF FL LMA + + DS EL EAF+VFDKD GEKL+D+EVDE
Sbjct: 61 DFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDE 120
Query: 107 LIGLADENNTGHVRYEEFAKVM 128
+I AD + G V YEEF +VM
Sbjct: 121 MIREADVDGDGQVNYEEFVQVM 142
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 140 bits (352), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 73/142 (51%), Positives = 97/142 (68%), Gaps = 17/142 (11%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSV 63
L ++QI+E+KEAF+LFDK+G G I +K +GTVMR++G+NPTE EL+D++ EVD D G++
Sbjct: 5 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 64 DFESFLKLMANHIPNVDSTAELLEAFQVFDKD-----------------GEKLSDQEVDE 106
DF FL LMA + + DS EL EAF+VFDKD GEKL+D+EVDE
Sbjct: 65 DFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDE 124
Query: 107 LIGLADENNTGHVRYEEFAKVM 128
+I AD + G + YEEF KVM
Sbjct: 125 MIREADVDGDGQINYEEFVKVM 146
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 140 bits (352), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 73/142 (51%), Positives = 97/142 (68%), Gaps = 17/142 (11%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSV 63
L E+QI+E+KEAF+LFDK+G G I +K +GTVMR++G+NPTE EL+D++ EVD D G++
Sbjct: 5 LTEDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 64 DFESFLKLMANHIPNVDSTAELLEAFQVFDKD-----------------GEKLSDQEVDE 106
DF FL LMA + + DS EL EAF+VFDKD GEKL+D+EVDE
Sbjct: 65 DFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDE 124
Query: 107 LIGLADENNTGHVRYEEFAKVM 128
+I AD + G + Y+EF KVM
Sbjct: 125 MIREADVDGDGQINYDEFVKVM 146
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 140 bits (352), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 72/141 (51%), Positives = 96/141 (68%), Gaps = 17/141 (12%)
Query: 6 EEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVDF 65
EEQI E+KEAF+LFDK+G G I +K +GTVMR++G+NPTE EL+D++ EVD D G++DF
Sbjct: 4 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 63
Query: 66 ESFLKLMANHIPNVDSTAELLEAFQVFDKD-----------------GEKLSDQEVDELI 108
FL +MA + + DS E+ EAF+VFDKD GEKL+D+EVDE+I
Sbjct: 64 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMI 123
Query: 109 GLADENNTGHVRYEEFAKVMT 129
AD + G V YEEF ++MT
Sbjct: 124 READIDGDGQVNYEEFVQMMT 144
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 139 bits (351), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 71/142 (50%), Positives = 96/142 (67%), Gaps = 17/142 (11%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSV 63
L EEQ+TE+KEAF+LFDK+G G I ++ +GTVMR++G+NPTE EL D++ E+D D G+V
Sbjct: 4 LTEEQVTEFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNGTV 63
Query: 64 DFESFLKLMANHIPNVDSTAELLEAFQVFDKD-----------------GEKLSDQEVDE 106
DF FL +MA + + D+ E+ EAF+VFDKD GEKLSD+EVDE
Sbjct: 64 DFPEFLGMMARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVDE 123
Query: 107 LIGLADENNTGHVRYEEFAKVM 128
+I AD + G V YEEF +V+
Sbjct: 124 MIRAADTDGDGQVNYEEFVRVL 145
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 43/64 (67%)
Query: 11 EWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVDFESFLK 70
E +EAF +FDK+G+G + + + VM +G +++E++++++ D D G V++E F++
Sbjct: 84 EIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVDEMIRAADTDGDGQVNYEEFVR 143
Query: 71 LMAN 74
++ +
Sbjct: 144 VLVS 147
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 139 bits (351), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 72/143 (50%), Positives = 97/143 (67%), Gaps = 17/143 (11%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSV 63
L EEQI E+KEAF+LFDK+G G I +K +GTVMR++G+NPTE EL+D++ EVD D G++
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 64 DFESFLKLMANHIPNVDSTAELLEAFQVFDKD-----------------GEKLSDQEVDE 106
DF FL +MA + + DS E+ EAF+VFDKD GEKL+D+EVD+
Sbjct: 65 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDQ 124
Query: 107 LIGLADENNTGHVRYEEFAKVMT 129
+I AD + G V YEEF ++MT
Sbjct: 125 MIREADIDGDGQVNYEEFVQMMT 147
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 139 bits (351), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 72/141 (51%), Positives = 96/141 (68%), Gaps = 17/141 (12%)
Query: 6 EEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVDF 65
EEQI E+KEAF+LFDK+G G I +K +GTVMR++G+NPTE EL+D++ EVD D G++DF
Sbjct: 2 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 61
Query: 66 ESFLKLMANHIPNVDSTAELLEAFQVFDKD-----------------GEKLSDQEVDELI 108
FL +MA + + DS E+ EAF+VFDKD GEKL+D+EVDE+I
Sbjct: 62 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMI 121
Query: 109 GLADENNTGHVRYEEFAKVMT 129
AD + G V YEEF ++MT
Sbjct: 122 READIDGDGQVNYEEFVQMMT 142
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 139 bits (350), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 72/143 (50%), Positives = 97/143 (67%), Gaps = 17/143 (11%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSV 63
L EEQI E+KEAF+LFDK+G G I +K +GTVMR++G+NPTE EL+D++ EVD D G++
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 64 DFESFLKLMANHIPNVDSTAELLEAFQVFDKD-----------------GEKLSDQEVDE 106
DF FL +MA + + DS E+ EAF+VFDKD GEKL+D+EVDE
Sbjct: 64 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 123
Query: 107 LIGLADENNTGHVRYEEFAKVMT 129
+I A+ + G V YEEF ++MT
Sbjct: 124 MIREANIDGDGQVNYEEFVQMMT 146
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 139 bits (349), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 73/143 (51%), Positives = 97/143 (67%), Gaps = 17/143 (11%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSV 63
L EEQI E+KEAF+LFDK+G G I +K +GTVMR++G+NPTE EL+D++ EVD D G++
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 364
Query: 64 DFESFLKLMANHIPNVDSTAELLEAFQVFDKD-----------------GEKLSDQEVDE 106
DF FL +MA + + DS E+ EAF+VFDKD GEKL+D+EVDE
Sbjct: 365 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 424
Query: 107 LIGLADENNTGHVRYEEFAKVMT 129
+I AD + G V YEEF ++MT
Sbjct: 425 MIREADIDGDGQVNYEEFVQMMT 447
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 139 bits (349), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 73/143 (51%), Positives = 97/143 (67%), Gaps = 17/143 (11%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSV 63
L EEQI E+KEAF+LFDK+G G I +K +GTVMR++G+NPTE EL+D++ EVD D G++
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 364
Query: 64 DFESFLKLMANHIPNVDSTAELLEAFQVFDKD-----------------GEKLSDQEVDE 106
DF FL +MA + + DS E+ EAF+VFDKD GEKL+D+EVDE
Sbjct: 365 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 424
Query: 107 LIGLADENNTGHVRYEEFAKVMT 129
+I AD + G V YEEF ++MT
Sbjct: 425 MIREADIDGDGQVNYEEFVQMMT 447
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 139 bits (349), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 72/143 (50%), Positives = 96/143 (67%), Gaps = 17/143 (11%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSV 63
L EEQI E+KEAF+LFDK+G G I +K +GTVMR++G+NPTE EL+D++ EVD D G++
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 64 DFESFLKLMANHIPNVDSTAELLEAFQVFDKD-----------------GEKLSDQEVDE 106
DF FL +MA + + DS E+ EAF+VFDKD GEKL+D+EVDE
Sbjct: 65 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDE 124
Query: 107 LIGLADENNTGHVRYEEFAKVMT 129
+I +D + G V YEEF +MT
Sbjct: 125 MIRESDIDGDGQVNYEEFVTMMT 147
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 43/64 (67%)
Query: 11 EWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVDFESFLK 70
E +EAF +FDK+G+G I + + VM +G T++E++++++E D D G V++E F+
Sbjct: 85 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIRESDIDGDGQVNYEEFVT 144
Query: 71 LMAN 74
+M +
Sbjct: 145 MMTS 148
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 139 bits (349), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 73/143 (51%), Positives = 97/143 (67%), Gaps = 17/143 (11%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSV 63
L EEQI E+KEAF+LFDK+G G I +K +GTVMR++G+NPTE EL+D++ EVD D G++
Sbjct: 306 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 365
Query: 64 DFESFLKLMANHIPNVDSTAELLEAFQVFDKD-----------------GEKLSDQEVDE 106
DF FL +MA + + DS E+ EAF+VFDKD GEKL+D+EVDE
Sbjct: 366 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 425
Query: 107 LIGLADENNTGHVRYEEFAKVMT 129
+I AD + G V YEEF ++MT
Sbjct: 426 MIREADIDGDGQVNYEEFVQMMT 448
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 138 bits (348), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 73/142 (51%), Positives = 96/142 (67%), Gaps = 17/142 (11%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSV 63
L +EQI E+KEAF+LFDK+G G I +K +GTVMR++G+NPTE EL+D++ EVD D G++
Sbjct: 4 LTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 64 DFESFLKLMANHIPNVDSTAELLEAFQVFDKD-----------------GEKLSDQEVDE 106
DF FL LMA + + DS +L EAF+VFDKD GEKL+D+EVDE
Sbjct: 64 DFPEFLNLMARKMKDTDSEEKLKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDE 123
Query: 107 LIGLADENNTGHVRYEEFAKVM 128
+I AD + G V YEEF +VM
Sbjct: 124 MIREADVDGDGQVNYEEFVQVM 145
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 138 bits (348), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 73/143 (51%), Positives = 97/143 (67%), Gaps = 17/143 (11%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSV 63
L EEQI E+KEAF+LFDK+G G I +K +GTVMR++G+NPTE EL+D++ EVD D G++
Sbjct: 271 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 330
Query: 64 DFESFLKLMANHIPNVDSTAELLEAFQVFDKD-----------------GEKLSDQEVDE 106
DF FL +MA + + DS E+ EAF+VFDKD GEKL+D+EVDE
Sbjct: 331 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 390
Query: 107 LIGLADENNTGHVRYEEFAKVMT 129
+I AD + G V YEEF ++MT
Sbjct: 391 MIREADIDGDGQVNYEEFVQMMT 413
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 138 bits (348), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 73/143 (51%), Positives = 97/143 (67%), Gaps = 17/143 (11%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSV 63
L EEQI E+KEAF+LFDK+G G I +K +GTVMR++G+NPTE EL+D++ EVD D G++
Sbjct: 268 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 327
Query: 64 DFESFLKLMANHIPNVDSTAELLEAFQVFDKD-----------------GEKLSDQEVDE 106
DF FL +MA + + DS E+ EAF+VFDKD GEKL+D+EVDE
Sbjct: 328 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 387
Query: 107 LIGLADENNTGHVRYEEFAKVMT 129
+I AD + G V YEEF ++MT
Sbjct: 388 MIREADIDGDGQVNYEEFVQMMT 410
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 138 bits (348), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 73/143 (51%), Positives = 97/143 (67%), Gaps = 17/143 (11%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSV 63
L EEQI E+KEAF+LFDK+G G I +K +GTVMR++G+NPTE EL+D++ EVD D G++
Sbjct: 304 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTI 363
Query: 64 DFESFLKLMANHIPNVDSTAELLEAFQVFDKD-----------------GEKLSDQEVDE 106
DF FL +MA + + DS E+ EAF+VFDKD GEKL+D+EVDE
Sbjct: 364 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 423
Query: 107 LIGLADENNTGHVRYEEFAKVMT 129
+I AD + G V YEEF ++MT
Sbjct: 424 MIREADIDGDGQVNYEEFVQMMT 446
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 138 bits (348), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 73/143 (51%), Positives = 97/143 (67%), Gaps = 17/143 (11%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSV 63
L EEQI E+KEAF+LFDK+G G I +K +GTVMR++G+NPTE EL+D++ EVD D G++
Sbjct: 271 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 330
Query: 64 DFESFLKLMANHIPNVDSTAELLEAFQVFDKD-----------------GEKLSDQEVDE 106
DF FL +MA + + DS E+ EAF+VFDKD GEKL+D+EVDE
Sbjct: 331 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 390
Query: 107 LIGLADENNTGHVRYEEFAKVMT 129
+I AD + G V YEEF ++MT
Sbjct: 391 MIREADIDGDGQVNYEEFVQMMT 413
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 138 bits (348), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 72/143 (50%), Positives = 96/143 (67%), Gaps = 17/143 (11%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSV 63
L EEQI E+KEAF+LFDK+G G I +K +GTVMR++G+NPTE EL+D++ EVD D G++
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 64 DFESFLKLMANHIPNVDSTAELLEAFQVFDKD-----------------GEKLSDQEVDE 106
DF FL +MA + + DS E+ EAF+VFDKD GE L+D+EVDE
Sbjct: 65 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDE 124
Query: 107 LIGLADENNTGHVRYEEFAKVMT 129
+I AD + G V YEEF ++MT
Sbjct: 125 MIREADIDGDGQVNYEEFVQMMT 147
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 138 bits (348), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 72/143 (50%), Positives = 96/143 (67%), Gaps = 17/143 (11%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSV 63
L EEQI E+KEAF+LFDK+G G I +K +GTVMR++G+NPTE EL+D++ EVD D G++
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 64 DFESFLKLMANHIPNVDSTAELLEAFQVFDKD-----------------GEKLSDQEVDE 106
DF FL +MA + + DS E+ EAF+VFDKD GE L+D+EVDE
Sbjct: 64 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDE 123
Query: 107 LIGLADENNTGHVRYEEFAKVMT 129
+I AD + G V YEEF ++MT
Sbjct: 124 MIREADIDGDGQVNYEEFVQMMT 146
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 138 bits (348), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 73/143 (51%), Positives = 97/143 (67%), Gaps = 17/143 (11%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSV 63
L EEQI E+KEAF+LFDK+G G I +K +GTVMR++G+NPTE EL+D++ EVD D G++
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 364
Query: 64 DFESFLKLMANHIPNVDSTAELLEAFQVFDKD-----------------GEKLSDQEVDE 106
DF FL +MA + + DS E+ EAF+VFDKD GEKL+D+EVDE
Sbjct: 365 DFPEFLTMMARWMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 424
Query: 107 LIGLADENNTGHVRYEEFAKVMT 129
+I AD + G V YEEF ++MT
Sbjct: 425 MIREADIDGDGQVNYEEFVQMMT 447
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 138 bits (347), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 73/143 (51%), Positives = 97/143 (67%), Gaps = 17/143 (11%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSV 63
L EEQI E+KEAF+LFDK+G G I +K +GTVMR++G+NPTE EL+D++ EVD D G++
Sbjct: 296 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTI 355
Query: 64 DFESFLKLMANHIPNVDSTAELLEAFQVFDKD-----------------GEKLSDQEVDE 106
DF FL +MA + + DS E+ EAF+VFDKD GEKL+D+EVDE
Sbjct: 356 DFPEFLIMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 415
Query: 107 LIGLADENNTGHVRYEEFAKVMT 129
+I AD + G V YEEF ++MT
Sbjct: 416 MIREADIDGDGQVNYEEFVQMMT 438
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 138 bits (347), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 73/143 (51%), Positives = 96/143 (67%), Gaps = 17/143 (11%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSV 63
L EEQI E+KEAF+LFDK+G G I +K +GTVMR++G+NPTE EL+D++ EVD D G++
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 364
Query: 64 DFESFLKLMANHIPNVDSTAELLEAFQVFDKD-----------------GEKLSDQEVDE 106
DF FL +MA + DS E+ EAF+VFDKD GEKL+D+EVDE
Sbjct: 365 DFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 424
Query: 107 LIGLADENNTGHVRYEEFAKVMT 129
+I AD + G V YEEF ++MT
Sbjct: 425 MIREADIDGDGQVNYEEFVQMMT 447
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 137 bits (346), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 73/143 (51%), Positives = 96/143 (67%), Gaps = 17/143 (11%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSV 63
L EEQI E+KEAF+LFDK+G G I +K +GTVMR++G+NPTE EL+D++ EVD D G++
Sbjct: 304 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTI 363
Query: 64 DFESFLKLMANHIPNVDSTAELLEAFQVFDKD-----------------GEKLSDQEVDE 106
DF FL +MA + DS E+ EAF+VFDKD GEKL+D+EVDE
Sbjct: 364 DFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 423
Query: 107 LIGLADENNTGHVRYEEFAKVMT 129
+I AD + G V YEEF ++MT
Sbjct: 424 MIREADIDGDGQVNYEEFVQMMT 446
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 137 bits (346), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 73/143 (51%), Positives = 96/143 (67%), Gaps = 17/143 (11%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSV 63
L EEQI E+KEAF+LFDK+G G I +K +GTVMR++G+NPTE EL+D++ EVD D G++
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTI 364
Query: 64 DFESFLKLMANHIPNVDSTAELLEAFQVFDKD-----------------GEKLSDQEVDE 106
DF FL +MA + DS E+ EAF+VFDKD GEKL+D+EVDE
Sbjct: 365 DFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 424
Query: 107 LIGLADENNTGHVRYEEFAKVMT 129
+I AD + G V YEEF ++MT
Sbjct: 425 MIREADIDGDGQVNYEEFVQMMT 447
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 137 bits (345), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 73/143 (51%), Positives = 96/143 (67%), Gaps = 17/143 (11%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSV 63
L EEQI E+KEAF+LFDK+G G I +K +GTVMR++G+NPTE EL+D++ EVD D G++
Sbjct: 304 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTI 363
Query: 64 DFESFLKLMANHIPNVDSTAELLEAFQVFDKD-----------------GEKLSDQEVDE 106
DF FL +MA + DS E+ EAF+VFDKD GEKL+D+EVDE
Sbjct: 364 DFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 423
Query: 107 LIGLADENNTGHVRYEEFAKVMT 129
+I AD + G V YEEF ++MT
Sbjct: 424 MIREADIDGDGQVNYEEFVQMMT 446
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 134 bits (337), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 73/143 (51%), Positives = 95/143 (66%), Gaps = 19/143 (13%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSV 63
L EEQI E+KEAF+LFDK+G G I +K +GTVMR++G+NPTE EL+D++ EVD D G++
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 64 DFESFLKLMANHIPNVDSTAELLEAFQVFDKD-----------------GEKLSDQEVDE 106
DF FL +MA + DS E+ EAF+VFDKD GEKL+D+EVDE
Sbjct: 64 DFPEFLTMMARKMK--DSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDE 121
Query: 107 LIGLADENNTGHVRYEEFAKVMT 129
+I AD + G V YEEF +MT
Sbjct: 122 MIREADIDGDGQVNYEEFVTMMT 144
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 43/64 (67%)
Query: 11 EWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVDFESFLK 70
E +EAF +FDK+G+G I + + VM +G T++E++++++E D D G V++E F+
Sbjct: 82 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVT 141
Query: 71 LMAN 74
+M +
Sbjct: 142 MMTS 145
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 134 bits (336), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 71/141 (50%), Positives = 96/141 (68%), Gaps = 18/141 (12%)
Query: 6 EEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVDF 65
EEQI E+KEAF+LFDK+G G I +K +GTVMR++G+NPTE EL+D++ EVD D G++DF
Sbjct: 2 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 61
Query: 66 ESFLKLMANHIPNVDSTAELLEAFQVFDKD-----------------GEKLSDQEVDELI 108
FL +MA + + DS E+ EAF+VFDKD GEKL+D+EVDE+I
Sbjct: 62 PEFLTMMARKMKDTDS-EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMI 120
Query: 109 GLADENNTGHVRYEEFAKVMT 129
A+ + G V YEEF ++MT
Sbjct: 121 REANIDGDGQVNYEEFVQMMT 141
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 131 bits (330), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 69/143 (48%), Positives = 94/143 (65%), Gaps = 17/143 (11%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSV 63
L EEQI E+KEAF+LFDK+G G I +K +GTVMR++G+NPTE EL+D++ EV D G++
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGGITTKQLGTVMRSLGQNPTEAELQDMINEVGADGNGTI 364
Query: 64 DFESFLKLMANHIPNVDSTAELLEAFQVFDKD-----------------GEKLSDQEVDE 106
DF FL +MA + + DS E+ EAF+VF KD GEKL+D+EVDE
Sbjct: 365 DFPQFLTMMARKMKDTDSEEEIREAFRVFGKDGNGYISAAQLRHVMTNLGEKLTDEEVDE 424
Query: 107 LIGLADENNTGHVRYEEFAKVMT 129
+I A + G V YE+F ++MT
Sbjct: 425 MIREAGIDGDGQVNYEQFVQMMT 447
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 126 bits (316), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 70/143 (48%), Positives = 89/143 (62%), Gaps = 17/143 (11%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSV 63
L EEQI E+KEAF+LFDK+G G I +K +GTV R++G+NPTE EL+D + EVD D G++
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTI 63
Query: 64 DFESFLKLMANHIPNVDSTAELLEAFQVFDKD-----------------GEKLSDQEVDE 106
DF FL A + DS E+ EAF+VFDKD GEKL+D+EVDE
Sbjct: 64 DFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDE 123
Query: 107 LIGLADENNTGHVRYEEFAKVMT 129
I AD + G V YEEF + T
Sbjct: 124 XIREADIDGDGQVNYEEFVQXXT 146
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 126 bits (316), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 66/142 (46%), Positives = 94/142 (66%), Gaps = 17/142 (11%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSV 63
L EEQI ++KEAF LFDK+G G I + + TV+R++ +NPTE+EL+D++ EVD D G++
Sbjct: 4 LSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTI 63
Query: 64 DFESFLKLMANHIPNVDSTAELLEAFQVFDKD-----------------GEKLSDQEVDE 106
+F+ FL LMA + + D+ EL EAF+VFDKD GEKL+D+EV++
Sbjct: 64 EFDEFLSLMAKKVKDTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQ 123
Query: 107 LIGLADENNTGHVRYEEFAKVM 128
+I AD + G V YEEF K+M
Sbjct: 124 MIKEADLDGDGQVNYEEFVKMM 145
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 125 bits (314), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 69/143 (48%), Positives = 89/143 (62%), Gaps = 17/143 (11%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSV 63
L EEQI E+KEAF+LFDK+G G I +K +GTV R++G+NPTE EL+D + EVD D G++
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTI 64
Query: 64 DFESFLKLMANHIPNVDSTAELLEAFQVFDKD-----------------GEKLSDQEVDE 106
DF FL A + DS E+ EAF+VFDKD GEKL+D+EVD+
Sbjct: 65 DFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDQ 124
Query: 107 LIGLADENNTGHVRYEEFAKVMT 129
I AD + G V YEEF + T
Sbjct: 125 XIREADIDGDGQVNYEEFVQXXT 147
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 123 bits (308), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 69/143 (48%), Positives = 88/143 (61%), Gaps = 17/143 (11%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSV 63
L EEQI E+KEAF+LFDK+G G I +K +GTV R++G NPTE EL+D + EVD D G++
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGCNPTEAELQDXINEVDADGNGTI 63
Query: 64 DFESFLKLMANHIPNVDSTAELLEAFQVFDKD-----------------GEKLSDQEVDE 106
+F FL A + DS E+ EAF+VFDKD GEKL+D+EVDE
Sbjct: 64 NFPEFLTXXARCXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDE 123
Query: 107 LIGLADENNTGHVRYEEFAKVMT 129
I AD + G V YEEF + T
Sbjct: 124 XIREADIDGDGQVNYEEFVQXXT 146
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 115 bits (289), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 58/143 (40%), Positives = 91/143 (63%), Gaps = 17/143 (11%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSV 63
L EEQI E+K+AF FDK G+GKI ++ +GT+MR +G+NPTE EL+DL+ E + ++ G +
Sbjct: 4 LTEEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQL 63
Query: 64 DFESFLKLMANHIPNVDSTAELLEAFQVFDKD-----------------GEKLSDQEVDE 106
+F F +MA + D+ E+ EAF++FD+D GEK++D+E+DE
Sbjct: 64 NFTEFCGIMAKQMRETDTEEEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDE 123
Query: 107 LIGLADENNTGHVRYEEFAKVMT 129
+I AD + G + YEEF +++
Sbjct: 124 MIREADFDGDGMINYEEFVWMIS 146
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 109 bits (273), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 60/143 (41%), Positives = 89/143 (62%), Gaps = 18/143 (12%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSV 63
L EEQI E+KEAFALFDK+ SG I + + TVMR++G +P+E E+ DL+ E+D D ++
Sbjct: 5 LTEEQIAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNHAI 64
Query: 64 DFESFLKLMANHIPNVDSTAELLEAFQVFDKD-----------------GEKLSDQEVDE 106
+F FL LM+ + DS ELLEAF+VFDK+ GEKL+D EVDE
Sbjct: 65 EFSEFLALMSRQLKCNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDE 124
Query: 107 LIGLADENNTGHVRYEEFAKVMT 129
++ + +G + ++FA +++
Sbjct: 125 MLREVS-DGSGEINIKQFAALLS 146
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 108 bits (271), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 59/143 (41%), Positives = 89/143 (62%), Gaps = 18/143 (12%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSV 63
L EEQI E+KEAFALFDK+ +G I S + TVMR++G +P+E E+ DL+ E+D D +
Sbjct: 5 LTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQI 64
Query: 64 DFESFLKLMANHIPNVDSTAELLEAFQVFDKD-----------------GEKLSDQEVDE 106
+F FL LM+ + + DS ELLEAF+VFDK+ GEKL+D EVD+
Sbjct: 65 EFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDD 124
Query: 107 LIGLADENNTGHVRYEEFAKVMT 129
++ + +G + ++FA +++
Sbjct: 125 MLREVSD-GSGEINIQQFAALLS 146
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 108 bits (270), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 59/144 (40%), Positives = 89/144 (61%), Gaps = 18/144 (12%)
Query: 3 TLDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGS 62
L EEQI E+KEAFALFDK+ +G I S + TVMR++G +P+E E+ DL+ E+D D
Sbjct: 3 NLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQ 62
Query: 63 VDFESFLKLMANHIPNVDSTAELLEAFQVFDKD-----------------GEKLSDQEVD 105
++F FL LM+ + + DS ELLEAF+VFDK+ GEKL+D EVD
Sbjct: 63 IEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVD 122
Query: 106 ELIGLADENNTGHVRYEEFAKVMT 129
+++ + +G + ++FA +++
Sbjct: 123 DMLREVSD-GSGEINIQQFAALLS 145
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
Length = 90
Score = 104 bits (259), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 48/87 (55%), Positives = 66/87 (75%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSV 63
L EEQI E+KEAF+LFDK+G G I +K +GTVMR++G+NPTE EL+D++ EVD D G++
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 64 DFESFLKLMANHIPNVDSTAELLEAFQ 90
DF FL +MA + + DS E+ EAF+
Sbjct: 64 DFPEFLTMMARKMKDTDSEEEIREAFR 90
Score = 26.6 bits (57), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 17/63 (26%)
Query: 83 AELLEAFQVFDKD-----------------GEKLSDQEVDELIGLADENNTGHVRYEEFA 125
AE EAF +FDKD G+ ++ E+ ++I D + G + + EF
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 126 KVM 128
+M
Sbjct: 70 TMM 72
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 102 bits (255), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 90/145 (62%), Gaps = 20/145 (13%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSV 63
L EE I E+K AF +FD +G G I +K +GTVMR +G+NPT++EL+ +++EVD D G++
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 64 DFESFLKLMANHI---PNVDSTAELLEAFQVFDKD-----------------GEKLSDQE 103
DFE FL +M + S EL + F++FDK+ GE +++++
Sbjct: 74 DFEEFLVMMVRQMKEDAKGKSEEELADCFRIFDKNADGFIDIEELGEILRATGEHVTEED 133
Query: 104 VDELIGLADENNTGHVRYEEFAKVM 128
+++L+ +D+NN G + ++EF K+M
Sbjct: 134 IEDLMKDSDKNNDGRIDFDEFLKMM 158
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 102 bits (255), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 50/96 (52%), Positives = 69/96 (71%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSV 63
L EEQI E+KEAFALFDK+ +G I S + TVMR++G +P+E E+ DL+ E+D D +
Sbjct: 4 LTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQI 63
Query: 64 DFESFLKLMANHIPNVDSTAELLEAFQVFDKDGEKL 99
+F FL LM+ + + DS ELLEAF+VFDK+G+ L
Sbjct: 64 EFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGL 99
Score = 35.8 bits (81), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Query: 5 DEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELE 49
D EQ E EAF +FDKNG G I + + V+ +IG T+ ELE
Sbjct: 80 DSEQ--ELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAELE 122
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 102 bits (253), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 89/145 (61%), Gaps = 20/145 (13%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSV 63
L EE I E+K AF +FD +G G I +K +GTVMR +G+NPT++EL+ +++EVD D G++
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 64 DFESFLKLMANHI---PNVDSTAELLEAFQVFDKD-----------------GEKLSDQE 103
DFE FL +M + S EL F++FDK+ GE +++++
Sbjct: 74 DFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEED 133
Query: 104 VDELIGLADENNTGHVRYEEFAKVM 128
+++L+ +D+NN G + ++EF K+M
Sbjct: 134 IEDLMKDSDKNNDGRIDFDEFLKMM 158
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 102 bits (253), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 90/145 (62%), Gaps = 20/145 (13%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSV 63
L EE I E+K AF +FD +G G I +K +GTVMR +G+NPT++EL+ +++EVD D G++
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 64 DFESFLKLMANHI---PNVDSTAELLEAFQVFDKD-----------------GEKLSDQE 103
DFE FL +M + S EL + F++FDK+ GE +++++
Sbjct: 74 DFEEFLVMMVRQMKEDAKGKSEEELEDCFRIFDKNADGFIDIEELGEILRATGEHVTEED 133
Query: 104 VDELIGLADENNTGHVRYEEFAKVM 128
+++L+ +D+NN G + ++EF K+M
Sbjct: 134 IEDLMKDSDKNNDGRIDFDEFLKMM 158
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 102 bits (253), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 86/145 (59%), Gaps = 20/145 (13%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSV 63
L EE I E+K AF +FD +G G I K +GTVMR +G+ PT++EL+ +++EVD D G++
Sbjct: 11 LSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTI 70
Query: 64 DFESFLKLMANHI---PNVDSTAELLEAFQVFDKD-----------------GEKLSDQE 103
DFE FL +M + S EL E F++FD++ GE ++D+E
Sbjct: 71 DFEEFLVMMVRQMKEDAKGKSEEELAECFRIFDRNADGYIDAEELAEIFRASGEHVTDEE 130
Query: 104 VDELIGLADENNTGHVRYEEFAKVM 128
++ L+ D+NN G + ++EF K+M
Sbjct: 131 IESLMKDGDKNNDGRIDFDEFLKMM 155
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 101 bits (252), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 89/145 (61%), Gaps = 20/145 (13%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSV 63
L EE I E+K AF +FD +G G I +K +GTVMR +G+NPT++EL+ +++EVD D G++
Sbjct: 11 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 70
Query: 64 DFESFLKLMANHI---PNVDSTAELLEAFQVFDKD-----------------GEKLSDQE 103
DFE FL +M + S EL F++FDK+ GE +++++
Sbjct: 71 DFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEED 130
Query: 104 VDELIGLADENNTGHVRYEEFAKVM 128
+++L+ +D+NN G + ++EF K+M
Sbjct: 131 IEDLMKDSDKNNDGRIDFDEFLKMM 155
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 100 bits (250), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 86/145 (59%), Gaps = 20/145 (13%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSV 63
L EE I E+K AF +FD +G G I K +GTVMR +G+ PT++EL+ +++EVD D G++
Sbjct: 11 LSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTI 70
Query: 64 DFESFLKLMANHI---PNVDSTAELLEAFQVFDKD-----------------GEKLSDQE 103
DFE FL +M + S EL E F++FD++ GE ++D+E
Sbjct: 71 DFEEFLVMMVRQMKEDAKGKSEEELAELFRIFDRNADGYIDAEELAEIFRASGEHVTDEE 130
Query: 104 VDELIGLADENNTGHVRYEEFAKVM 128
++ L+ D+NN G + ++EF K+M
Sbjct: 131 IESLMKDGDKNNDGRIDFDEFLKMM 155
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 100 bits (249), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 88/145 (60%), Gaps = 20/145 (13%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSV 63
L EE I E+K AF +FD +G G I +K +GTVMR +G+NPT++EL+ +++EVD D G++
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 64 DFESFLKLMANHI---PNVDSTAELLEAFQVFDKD-----------------GEKLSDQE 103
DFE FL +M + S EL F++FDK+ GE + +++
Sbjct: 74 DFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEED 133
Query: 104 VDELIGLADENNTGHVRYEEFAKVM 128
+++L+ +D+NN G + ++EF K+M
Sbjct: 134 IEDLMKDSDKNNDGRIDFDEFLKMM 158
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 99.4 bits (246), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 85/145 (58%), Gaps = 17/145 (11%)
Query: 1 KLTLDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDV 60
++ L EEQ E +EAF LFD +GSG I +K + MRA+G P ++E++ ++ E+D D
Sbjct: 19 RVGLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGS 78
Query: 61 GSVDFESFLKLMANHIPNVDSTAELLEAFQVFDKD-----------------GEKLSDQE 103
G++DFE FL +M + DS E+L+AF++FD D GE L+++E
Sbjct: 79 GTIDFEEFLTMMTAKMGERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEE 138
Query: 104 VDELIGLADENNTGHVRYEEFAKVM 128
+ E+I AD N+ + +EF ++M
Sbjct: 139 LQEMIAEADRNDDNEIDEDEFIRIM 163
Score = 28.9 bits (63), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 17/63 (26%)
Query: 84 ELLEAFQVFDKDGEKLSD-----------------QEVDELIGLADENNTGHVRYEEFAK 126
E+ EAF +FD DG D +E+ ++I D++ +G + +EEF
Sbjct: 29 EIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFLT 88
Query: 127 VMT 129
+MT
Sbjct: 89 MMT 91
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 99.4 bits (246), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 84/142 (59%), Gaps = 17/142 (11%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSV 63
L EEQ E +EAF LFD +GSG I +K + MRA+G P ++E++ ++ ++D D G++
Sbjct: 2 LTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMIADIDKDGSGTI 61
Query: 64 DFESFLKLMANHIPNVDSTAELLEAFQVFDKD-----------------GEKLSDQEVDE 106
DFE FL++M + DS E+++AF++FD D GE ++D+E+ E
Sbjct: 62 DFEEFLQMMTAKMGERDSREEIMKAFRLFDDDETGKISFKNLKRVAKELGENMTDEELQE 121
Query: 107 LIGLADENNTGHVRYEEFAKVM 128
+I AD + G V EEF ++M
Sbjct: 122 MIDEADRDGDGEVNEEEFFRIM 143
Score = 29.3 bits (64), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 17/63 (26%)
Query: 84 ELLEAFQVFDKDGEKLSD-----------------QEVDELIGLADENNTGHVRYEEFAK 126
E+ EAF +FD DG D +E+ ++I D++ +G + +EEF +
Sbjct: 9 EIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMIADIDKDGSGTIDFEEFLQ 68
Query: 127 VMT 129
+MT
Sbjct: 69 MMT 71
>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe
Bound With Er Alpha Peptide
Length = 80
Score = 95.9 bits (237), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 43/77 (55%), Positives = 59/77 (76%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSV 63
L EEQI E+KEAF+LFDK+G G I +K +GTVMR++G+NPTE EL+D++ EVD D G++
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 64 DFESFLKLMANHIPNVD 80
DF FL +MA + + D
Sbjct: 64 DFPEFLTMMARKMKDTD 80
Score = 26.9 bits (58), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 17/63 (26%)
Query: 83 AELLEAFQVFDKD-----------------GEKLSDQEVDELIGLADENNTGHVRYEEFA 125
AE EAF +FDKD G+ ++ E+ ++I D + G + + EF
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 126 KVM 128
+M
Sbjct: 70 TMM 72
>pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
pdb|3UCT|B Chain B, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
pdb|3UCW|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|B Chain B, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|C Chain C, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|D Chain D, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCY|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
Length = 79
Score = 93.6 bits (231), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 58/76 (76%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSV 63
L EEQI E+KEAF+LFDK+G G I +K +GTVMR++G+NPTE EL+D++ EVD D G++
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 64 DFESFLKLMANHIPNV 79
DF FL +MA + +
Sbjct: 64 DFPEFLTMMARKMKDT 79
Score = 26.9 bits (58), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 17/63 (26%)
Query: 83 AELLEAFQVFDKD-----------------GEKLSDQEVDELIGLADENNTGHVRYEEFA 125
AE EAF +FDKD G+ ++ E+ ++I D + G + + EF
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 126 KVM 128
+M
Sbjct: 70 TMM 72
>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal
Domain
pdb|2PQ3|A Chain A, N-Terminal Calmodulin Zn-Trapped Intermediate
pdb|2KUG|A Chain A, Halothane Binds To Druggable Sites In
Calcium-Calmodulin: Solution Structure Of Halothane-Cam
N-Terminal Domain
Length = 76
Score = 93.6 bits (231), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 57/73 (78%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSV 63
L EEQI E+KEAF+LFDK+G G I +K +GTVMR++G+NPTE EL+D++ EVD D G++
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 64 DFESFLKLMANHI 76
DF FL +MA +
Sbjct: 64 DFPEFLTMMARKM 76
Score = 26.9 bits (58), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 17/63 (26%)
Query: 83 AELLEAFQVFDKD-----------------GEKLSDQEVDELIGLADENNTGHVRYEEFA 125
AE EAF +FDKD G+ ++ E+ ++I D + G + + EF
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 126 KVM 128
+M
Sbjct: 70 TMM 72
>pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A
Binding Motif (Nscate) Peptide From The N-Terminal
Cytoplasmic Domain Of The L-Type Voltage-Cated Calcium
Channel Alpha1c Subunit
Length = 77
Score = 93.6 bits (231), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 57/73 (78%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSV 63
L EEQI E+KEAF+LFDK+G G I +K +GTVMR++G+NPTE EL+D++ EVD D G++
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 64 DFESFLKLMANHI 76
DF FL +MA +
Sbjct: 64 DFPEFLTMMARKM 76
Score = 26.9 bits (58), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 17/63 (26%)
Query: 83 AELLEAFQVFDKD-----------------GEKLSDQEVDELIGLADENNTGHVRYEEFA 125
AE EAF +FDKD G+ ++ E+ ++I D + G + + EF
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 126 KVM 128
+M
Sbjct: 70 TMM 72
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human
N60d Calmodulin Refined With Paramagnetism Based
Strategy
Length = 79
Score = 93.6 bits (231), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 58/76 (76%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSV 63
L EEQI E+KEAF+LFDK+G G I +K +GTVMR++G+NPTE EL+D++ EVD D G++
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTI 63
Query: 64 DFESFLKLMANHIPNV 79
DF FL +MA + +
Sbjct: 64 DFPEFLTMMARKMKDT 79
Score = 26.2 bits (56), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 17/63 (26%)
Query: 83 AELLEAFQVFDKD-----------------GEKLSDQEVDELIGLADENNTGHVRYEEFA 125
AE EAF +FDKD G+ ++ E+ ++I D + G + + EF
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFL 69
Query: 126 KVM 128
+M
Sbjct: 70 TMM 72
>pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal
Domain
Length = 76
Score = 93.6 bits (231), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 57/73 (78%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSV 63
L EEQI E+KEAF+LFDK+G G I +K +GTVMR++G+NPTE EL+D++ EVD D G++
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 64 DFESFLKLMANHI 76
DF FL +MA +
Sbjct: 64 DFPEFLTMMARKM 76
Score = 26.9 bits (58), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 17/63 (26%)
Query: 83 AELLEAFQVFDKD-----------------GEKLSDQEVDELIGLADENNTGHVRYEEFA 125
AE EAF +FDKD G+ ++ E+ ++I D + G + + EF
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 126 KVM 128
+M
Sbjct: 70 TMM 72
>pdb|2RO8|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 N-Terminal Domain
Length = 79
Score = 93.2 bits (230), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 59/76 (77%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSV 63
L +EQI+E+KEAF+LFDK+G G I +K +GTVMR++G+NPTE EL+D++ EVD D G++
Sbjct: 4 LTDEQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 64 DFESFLKLMANHIPNV 79
DF FL LMA + +
Sbjct: 64 DFPEFLNLMARKMKDT 79
Score = 26.2 bits (56), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 17/63 (26%)
Query: 83 AELLEAFQVFDKDGEKL-----------------SDQEVDELIGLADENNTGHVRYEEFA 125
+E EAF +FDKDG+ ++ E+ ++I D + G + + EF
Sbjct: 10 SEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 126 KVM 128
+M
Sbjct: 70 NLM 72
>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-75
Length = 75
Score = 92.8 bits (229), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 42/70 (60%), Positives = 56/70 (80%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSV 63
L EEQI E+KEAF+LFDK+G G I +K +GTVMR++G+NPTE EL+D++ EVD D G++
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 64 DFESFLKLMA 73
DF FL +MA
Sbjct: 64 DFPEFLTMMA 73
Score = 26.9 bits (58), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 17/63 (26%)
Query: 83 AELLEAFQVFDKD-----------------GEKLSDQEVDELIGLADENNTGHVRYEEFA 125
AE EAF +FDKD G+ ++ E+ ++I D + G + + EF
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 126 KVM 128
+M
Sbjct: 70 TMM 72
>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin
Amino- Terminal Domain (Ce2-Tr1c), 23 Structures
Length = 76
Score = 92.8 bits (229), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 42/70 (60%), Positives = 56/70 (80%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSV 63
L EEQI E+KEAF+LFDK+G G I +K +GTVMR++G+NPTE EL+D++ EVD D G++
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 64 DFESFLKLMA 73
DF FL +MA
Sbjct: 65 DFPEFLTMMA 74
Score = 26.9 bits (58), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 17/63 (26%)
Query: 83 AELLEAFQVFDKD-----------------GEKLSDQEVDELIGLADENNTGHVRYEEFA 125
AE EAF +FDKD G+ ++ E+ ++I D + G + + EF
Sbjct: 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 70
Query: 126 KVM 128
+M
Sbjct: 71 TMM 73
>pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand
Proteins: X-Ray Structure Of Ca2+-Saturated Double
Mutant Q41l-K75i Of N-Domain Of Calmodulin
Length = 78
Score = 90.5 bits (223), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 55/70 (78%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSV 63
L EEQI E+KEAF+L+DK+G G I +K +GTVMR++G NPTE EL+D++ EVD D G++
Sbjct: 4 LTEEQIAEFKEAFSLYDKDGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDADGNGTI 63
Query: 64 DFESFLKLMA 73
DF FL +MA
Sbjct: 64 DFPEFLTMMA 73
Score = 25.4 bits (54), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 17/63 (26%)
Query: 83 AELLEAFQVFDKDGEKL-----------------SDQEVDELIGLADENNTGHVRYEEFA 125
AE EAF ++DKDG+ ++ E+ ++I D + G + + EF
Sbjct: 10 AEFKEAFSLYDKDGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 126 KVM 128
+M
Sbjct: 70 TMM 72
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 89.7 bits (221), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 79/140 (56%), Gaps = 17/140 (12%)
Query: 6 EEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVDF 65
EEQ E +EAF LFD +G+G I K + MRA+G P ++E++ ++ E+D + G ++F
Sbjct: 2 EEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNF 61
Query: 66 ESFLKLMANHIPNVDSTAELLEAFQVFDKD-----------------GEKLSDQEVDELI 108
FL +M + D+ E+L+AF++FD D GE L+D+E+ E+I
Sbjct: 62 GDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMI 121
Query: 109 GLADENNTGHVRYEEFAKVM 128
AD + G V +EF ++M
Sbjct: 122 DEADRDGDGEVSEQEFLRIM 141
Score = 26.2 bits (56), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 17/63 (26%)
Query: 84 ELLEAFQVFDKDGEKLSD-----------------QEVDELIGLADENNTGHVRYEEFAK 126
E+ EAF +FD DG D +E+ ++I D+ TG + + +F
Sbjct: 7 EIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLT 66
Query: 127 VMT 129
VMT
Sbjct: 67 VMT 69
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 84.0 bits (206), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 83/146 (56%), Gaps = 21/146 (14%)
Query: 4 LDEEQITEWKEAFALFDKNG-SGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGS 62
L EEQ E+K AF +F G I +K +G VMR +G+NPT +EL++++ EVD D G+
Sbjct: 12 LTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGT 71
Query: 63 VDFESFLKLMANHIPNVD---STAELLEAFQVFDKD-----------------GEKLSDQ 102
VDF+ FL +M + + S EL + F++FDK+ GE +++
Sbjct: 72 VDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITED 131
Query: 103 EVDELIGLADENNTGHVRYEEFAKVM 128
+++EL+ D+NN G + Y+EF + M
Sbjct: 132 DIEELMKDGDKNNDGRIDYDEFLEFM 157
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 83.6 bits (205), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 84/147 (57%), Gaps = 23/147 (15%)
Query: 4 LDEEQITEWKEAFALFDKNG-SGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGS 62
L EEQ E+K AF +F G I +K +G VMR +G+NPT +EL++++ EVD D G+
Sbjct: 12 LTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGT 71
Query: 63 VDFESFLKLMANHIPNVDSTA----ELLEAFQVFDKD-----------------GEKLSD 101
VDF+ FL +M + + DS EL + F++FDK+ GE +++
Sbjct: 72 VDFDEFLVMMVRSMKD-DSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITE 130
Query: 102 QEVDELIGLADENNTGHVRYEEFAKVM 128
+++EL+ D+NN G + Y+EF + M
Sbjct: 131 DDIEELMKDGDKNNDGRIDYDEFLEFM 157
>pdb|3J04|C Chain C, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|F Chain F, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 148
Score = 83.6 bits (205), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 79/146 (54%), Gaps = 22/146 (15%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVG-- 61
EEQ E+KEAF LFD+ G GKI+ G VMRA+G+NPT E+ +L D++
Sbjct: 1 FSEEQTAEFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVMKVLGNPKSDEMNLK 60
Query: 62 SVDFESFLKLMANHIPNVDSTA--ELLEAFQVFDKD-----------------GEKLSDQ 102
++ FE FL +M N D + +E +VFDK+ GEK++++
Sbjct: 61 TLKFEQFLPMMQTIAKNKDQGCFEDYVEGLRVFDKEGNGTVMGAEIRHVLVTLGEKMTEE 120
Query: 103 EVDELIGLADENNTGHVRYEEFAKVM 128
EV++L+ E++ G + YEE +++
Sbjct: 121 EVEQLVA-GHEDSNGCINYEELVRMV 145
>pdb|1BR1|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR4|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1I84|T Chain T, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|W Chain W, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|3DTP|C Chain C, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|D Chain D, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 150
Score = 83.6 bits (205), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 79/146 (54%), Gaps = 22/146 (15%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVG-- 61
EEQ E+KEAF LFD+ G GKI+ G VMRA+G+NPT E+ +L D++
Sbjct: 3 FSEEQTAEFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVMKVLGNPKSDEMNLK 62
Query: 62 SVDFESFLKLMANHIPNVDSTA--ELLEAFQVFDKD-----------------GEKLSDQ 102
++ FE FL +M N D + +E +VFDK+ GEK++++
Sbjct: 63 TLKFEQFLPMMQTIAKNKDQGCFEDYVEGLRVFDKEGNGTVMGAEIRHVLVTLGEKMTEE 122
Query: 103 EVDELIGLADENNTGHVRYEEFAKVM 128
EV++L+ E++ G + YEE +++
Sbjct: 123 EVEQLVA-GHEDSNGCINYEELVRMV 147
>pdb|2ROA|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 N-Terminal Domain
Length = 79
Score = 82.8 bits (203), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 56/75 (74%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSV 63
L EEQI ++KEAF LFDK+G G I + + TV+R++ +NPTE+EL+D++ EVD D G++
Sbjct: 4 LSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTI 63
Query: 64 DFESFLKLMANHIPN 78
+F+ FL LMA + +
Sbjct: 64 EFDEFLSLMAKKVKD 78
Score = 26.2 bits (56), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 28/59 (47%), Gaps = 17/59 (28%)
Query: 87 EAFQVFDKDGEKL-----------------SDQEVDELIGLADENNTGHVRYEEFAKVM 128
EAF +FDKDG+ +++E+ ++I D + G + ++EF +M
Sbjct: 14 EAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSLM 72
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 82.8 bits (203), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 84/147 (57%), Gaps = 23/147 (15%)
Query: 4 LDEEQITEWKEAFALFDKNG-SGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGS 62
L EEQ E+K AF +F G I +K +G VMR +G+NPT +EL++++ EVD D G+
Sbjct: 12 LTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGT 71
Query: 63 VDFESFLKLMANHIPNVDSTA----ELLEAFQVFDKD-----------------GEKLSD 101
VDF+ FL +M + + DS EL + F++FDK+ GE +++
Sbjct: 72 VDFDEFLVMMVRCMKD-DSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITE 130
Query: 102 QEVDELIGLADENNTGHVRYEEFAKVM 128
+++EL+ D+NN G + Y+EF + M
Sbjct: 131 DDIEELMKDGDKNNDGRIDYDEFLEFM 157
>pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean
Calmod Isoform 4 N-Domain
Length = 76
Score = 82.4 bits (202), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 55/73 (75%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSV 63
L EEQI ++KEAF LFDK+G G I + + TV+R++ +NPTE+EL+D++ EVD D G++
Sbjct: 4 LSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTI 63
Query: 64 DFESFLKLMANHI 76
+F+ FL LMA +
Sbjct: 64 EFDEFLSLMAKKV 76
Score = 26.2 bits (56), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 15/60 (25%), Positives = 28/60 (46%), Gaps = 17/60 (28%)
Query: 87 EAFQVFDKDGEKL-----------------SDQEVDELIGLADENNTGHVRYEEFAKVMT 129
EAF +FDKDG+ +++E+ ++I D + G + ++EF +M
Sbjct: 14 EAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSLMA 73
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 81.6 bits (200), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 83/146 (56%), Gaps = 21/146 (14%)
Query: 4 LDEEQITEWKEAFALFDKNG-SGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGS 62
L EEQ E+K AF +F G I +K +G VMR +G+NPT +EL++++ EVD D G+
Sbjct: 12 LTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGT 71
Query: 63 VDFESFLKLMANHIPNVD---STAELLEAFQVFDKD-----------------GEKLSDQ 102
VDF+ FL +M + + S EL + F+++DK+ GE +++
Sbjct: 72 VDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMWDKNADGYIDLDELKIMLQATGETITED 131
Query: 103 EVDELIGLADENNTGHVRYEEFAKVM 128
+++EL+ D+NN G + Y+EF + M
Sbjct: 132 DIEELMKDGDKNNDGRIDYDEFLEFM 157
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 81.6 bits (200), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 83/146 (56%), Gaps = 21/146 (14%)
Query: 4 LDEEQITEWKEAFALFDKNG-SGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGS 62
L EEQ E+K AF +F G I +K +G VMR +G+NPT +EL++++ EVD D G+
Sbjct: 12 LTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGT 71
Query: 63 VDFESFLKLMANHIPNVD---STAELLEAFQVFDKD-----------------GEKLSDQ 102
VDF+ FL +M + + S EL + F++FDK+ GE +++
Sbjct: 72 VDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITED 131
Query: 103 EVDELIGLADENNTGHVRYEEFAKVM 128
+++EL+ D+NN G + Y+E+ + M
Sbjct: 132 DIEELMKDGDKNNDGRIDYDEWLEFM 157
>pdb|1SMG|A Chain A, Calcium-Bound E41a Mutant Of The N-Domain Of Chicken
Troponin C, Nmr, 40 Structures
Length = 90
Score = 80.9 bits (198), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 53/73 (72%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSV 63
L EE I E+K AF +FD +G G I +K +GTVMR +G+NPT++EL+ +++EVD D G++
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKALGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 64 DFESFLKLMANHI 76
DFE FL +M +
Sbjct: 74 DFEEFLVMMVRQM 86
Score = 26.6 bits (57), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 17/63 (26%)
Query: 83 AELLEAFQVFDKDG-----------------EKLSDQEVDELIGLADENNTGHVRYEEFA 125
AE AF +FD DG + + +E+D +I DE+ +G + +EEF
Sbjct: 20 AEFKAAFDMFDADGGGDISTKALGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFL 79
Query: 126 KVM 128
+M
Sbjct: 80 VMM 82
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 80.9 bits (198), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 82/146 (56%), Gaps = 21/146 (14%)
Query: 4 LDEEQITEWKEAFALFDKNG-SGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGS 62
L EEQ E+K AF +F G I +K +G VMR +G+NPT +EL++++ EVD D G+
Sbjct: 12 LTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGT 71
Query: 63 VDFESFLKLMANHIPNVD---STAELLEAFQVFDKD-----------------GEKLSDQ 102
VDF+ FL +M + + S EL + F++ DK+ GE +++
Sbjct: 72 VDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMXDKNADGYIDLDELKIMLQATGETITED 131
Query: 103 EVDELIGLADENNTGHVRYEEFAKVM 128
+++EL+ D+NN G + Y+EF + M
Sbjct: 132 DIEELMKDGDKNNDGRIDYDEFLEFM 157
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant
Of Human Cardiac Troponin C
Length = 161
Score = 80.9 bits (198), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 82/146 (56%), Gaps = 21/146 (14%)
Query: 4 LDEEQITEWKEAFALFDKNG-SGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGS 62
L EEQ E+K AF +F G I +K +G VMR +G+NPT +EL++++ EVD D G+
Sbjct: 12 LTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGT 71
Query: 63 VDFESFLKLMANHIPNVD---STAELLEAFQVFDKD-----------------GEKLSDQ 102
VDF+ FL +M + + S EL + F++FDK+ GE +++
Sbjct: 72 VDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITED 131
Query: 103 EVDELIGLADENNTGHVRYEEFAKVM 128
+++EL+ D+NN G + Y+E + M
Sbjct: 132 DIEELMKDGDKNNDGRIDYDEXLEFM 157
>pdb|1AVS|A Chain A, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1AVS|B Chain B, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1BLQ|A Chain A, Structure And Interaction Site Of The Regulatory Domain
Of Troponin-C When Complexed With The 96-148 Region Of
Troponin-I, Nmr, 29 Structures
pdb|1SKT|A Chain A, Solution Structure Of Apo N-Domain Of Troponin C, Nmr,
40 Structures
pdb|1TNP|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1TNQ|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1ZAC|A Chain A, N-Domain Of Troponin C From Chicken Skeletal Muscle,
Nmr, Minimized Average Structure
Length = 90
Score = 80.5 bits (197), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 53/73 (72%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSV 63
L EE I E+K AF +FD +G G I +K +GTVMR +G+NPT++EL+ +++EVD D G++
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 64 DFESFLKLMANHI 76
DFE FL +M +
Sbjct: 74 DFEEFLVMMVRQM 86
Score = 26.6 bits (57), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 17/63 (26%)
Query: 83 AELLEAFQVFDKDG-----------------EKLSDQEVDELIGLADENNTGHVRYEEFA 125
AE AF +FD DG + + +E+D +I DE+ +G + +EEF
Sbjct: 20 AEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFL 79
Query: 126 KVM 128
+M
Sbjct: 80 VMM 82
>pdb|1OE9|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain - Nucleotide-Free
pdb|1W7I|B Chain B, Crystal Structure Of Myosin V Motor Without Nucleotide
Soaked In 10 Mm Mgadp
pdb|1W7J|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain + Adp-Befx - Near Rigor
Length = 151
Score = 80.1 bits (196), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 82/146 (56%), Gaps = 22/146 (15%)
Query: 2 LTLDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVG 61
+ +++Q+ E+KEAF LFD+ G GKI+ G VMRA+G+NPT E+ +L D++
Sbjct: 2 IEFNKDQLEEFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELK 61
Query: 62 S--VDFESFLKLMANHIPNV--DSTAELLEAFQVFDKD-----------------GEKLS 100
S VDFE+FL ++ N + + LE F+VFDK+ GEK++
Sbjct: 62 SRRVDFETFLPMLQAVAKNRGQGTYEDYLEGFRVFDKEGNGKVMGAELRHVLTTLGEKMT 121
Query: 101 DQEVDELIGLADENNTGHVRYEEFAK 126
++EV+ ++ E++ G + YE F K
Sbjct: 122 EEEVETVLA-GHEDSNGCINYEAFLK 146
>pdb|1TRF|A Chain A, Solution Structure Of The Tr1c Fragment Of Skeletal
Muscle Troponin-C
Length = 76
Score = 80.1 bits (196), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 53/73 (72%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSV 63
L EE I E+K AF +FD +G G I +K +GTVMR +G+NPT++EL+ +++EVD D G++
Sbjct: 3 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 62
Query: 64 DFESFLKLMANHI 76
DFE FL +M +
Sbjct: 63 DFEEFLVMMVRQM 75
Score = 26.6 bits (57), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 17/64 (26%)
Query: 83 AELLEAFQVFDKDG-----------------EKLSDQEVDELIGLADENNTGHVRYEEFA 125
AE AF +FD DG + + +E+D +I DE+ +G + +EEF
Sbjct: 9 AEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFL 68
Query: 126 KVMT 129
+M
Sbjct: 69 VMMV 72
>pdb|1NPQ|A Chain A, Structure Of A Rhodamine-Labeled N-Domain Troponin C
Mutant (Ca2+ Saturated) In Complex With Skeletal
Troponin I 115- 131
Length = 90
Score = 79.0 bits (193), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 51/73 (69%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSV 63
L EE I E+K AF +FD +G G I +K +GTVMR +G+NPT+ EL+ ++ EVD D G++
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKCELDAIICEVDEDGSGTI 73
Query: 64 DFESFLKLMANHI 76
DFE FL +M +
Sbjct: 74 DFEEFLVMMVRQM 86
Score = 26.6 bits (57), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 17/63 (26%)
Query: 83 AELLEAFQVFDKDG-----------------EKLSDQEVDELIGLADENNTGHVRYEEFA 125
AE AF +FD DG + + E+D +I DE+ +G + +EEF
Sbjct: 20 AEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKCELDAIICEVDEDGSGTIDFEEFL 79
Query: 126 KVM 128
+M
Sbjct: 80 VMM 82
>pdb|1F54|A Chain A, Solution Structure Of The Apo N-Terminal Domain Of Yeast
Calmodulin
pdb|1F55|A Chain A, Solution Structure Of The Calcium Bound N-Terminal
Domain Of Yeast Calmodulin
Length = 77
Score = 77.8 bits (190), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 51/73 (69%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSV 63
L EEQI E+KEAFALFDK+ +G I S + TVMR++G +P+E E+ DL+ E+D D +
Sbjct: 4 LTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQI 63
Query: 64 DFESFLKLMANHI 76
+F FL LM+ +
Sbjct: 64 EFSEFLALMSRQL 76
>pdb|2LC5|A Chain A, Calmodulin-Like Protein From Entamoeba Histolytica:
Solution Structure And Calcium-Binding Properties Of A
Partially Folded Protein
Length = 85
Score = 75.9 bits (185), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 57/80 (71%), Gaps = 2/80 (2%)
Query: 2 LTLDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVG 61
LT +E+Q E+KEAF LFDK+ K+ ++ +GTVMRA+G NPT+Q++ +++K+ D D+ G
Sbjct: 8 LTAEEQQ--EYKEAFQLFDKDNDNKLTAEELGTVMRALGANPTKQKISEIVKDYDKDNSG 65
Query: 62 SVDFESFLKLMANHIPNVDS 81
D E+FL +M + VDS
Sbjct: 66 KFDQETFLTIMLEYGQEVDS 85
Score = 27.3 bits (59), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 17/62 (27%)
Query: 84 ELLEAFQVFDKD-----------------GEKLSDQEVDELIGLADENNTGHVRYEEFAK 126
E EAFQ+FDKD G + Q++ E++ D++N+G E F
Sbjct: 15 EYKEAFQLFDKDNDNKLTAEELGTVMRALGANPTKQKISEIVKDYDKDNSGKFDQETFLT 74
Query: 127 VM 128
+M
Sbjct: 75 IM 76
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 73.2 bits (178), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 80/149 (53%), Gaps = 22/149 (14%)
Query: 3 TLDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGS 62
+L E+I E +EAF FDK+ G I + +G MR +G PTE EL +L ++++ + G
Sbjct: 18 SLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGH 77
Query: 63 VDFESFLKLMANHI----PNVDSTAELLEAFQVFDKDGE------------------KLS 100
VDF+ F++LM + ++ EL +AF+ FD +G+ ++
Sbjct: 78 VDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVG 137
Query: 101 DQEVDELIGLADENNTGHVRYEEFAKVMT 129
++++E+I D N G V +EEF ++M+
Sbjct: 138 HRDIEEIIRDVDLNGDGRVDFEEFVRMMS 166
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 72.8 bits (177), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 80/149 (53%), Gaps = 22/149 (14%)
Query: 3 TLDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGS 62
+L E+I E +EAF FDK+ G I + +G MR +G PTE EL +L ++++ + G
Sbjct: 4 SLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGH 63
Query: 63 VDFESFLKLMANHI----PNVDSTAELLEAFQVFDKDGE------------------KLS 100
VDF+ F++LM + ++ EL +AF+ FD +G+ ++
Sbjct: 64 VDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRALLGHQVG 123
Query: 101 DQEVDELIGLADENNTGHVRYEEFAKVMT 129
++++E+I D N G V +EEF ++M+
Sbjct: 124 HRDIEEIIRDVDLNGDGRVDFEEFVRMMS 152
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 72.8 bits (177), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 80/149 (53%), Gaps = 22/149 (14%)
Query: 3 TLDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGS 62
+L E+I E +EAF FDK+ G I + +G MR +G PTE EL +L ++++ + G
Sbjct: 4 SLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGH 63
Query: 63 VDFESFLKLMANHI----PNVDSTAELLEAFQVFDKDGE------------------KLS 100
VDF+ F++LM + ++ EL +AF+ FD +G+ ++
Sbjct: 64 VDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVG 123
Query: 101 DQEVDELIGLADENNTGHVRYEEFAKVMT 129
++++E+I D N G V +EEF ++M+
Sbjct: 124 HRDIEEIIRDVDLNGDGRVDFEEFVRMMS 152
>pdb|1GGW|A Chain A, Cdc4p From Schizosaccharomyces Pombe
Length = 140
Score = 70.9 bits (172), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 77/139 (55%), Gaps = 26/139 (18%)
Query: 10 TEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVDFESFL 69
+ +K+AF+LFD++G+G+I +G ++RA G+NPT E + E++ VD E FL
Sbjct: 5 SPYKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAE----ITEIESTLPAEVDMEQFL 60
Query: 70 KLM--ANHIPNVDSTAELLEAFQVFDKD-----------------GEKLSDQEVDELI-G 109
+++ N E ++ FQVFDKD GEKLS++E+DEL+ G
Sbjct: 61 QVLNRPNGFDMPGDPEEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKG 120
Query: 110 LADENNTGHVRYEEFAKVM 128
+ ++ G V Y +F +++
Sbjct: 121 VPVKD--GMVNYHDFVQMI 137
>pdb|2AMI|A Chain A, Solution Structure Of The Calcium-Loaded N-Terminal
Sensor Domain Of Centrin
Length = 96
Score = 68.9 bits (167), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 50/76 (65%)
Query: 1 KLTLDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDV 60
++ L EEQ E +EAF LFD +GSG I +K + MRA+G P ++E++ ++ E+D D
Sbjct: 21 RVGLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGS 80
Query: 61 GSVDFESFLKLMANHI 76
G++DFE FL +M +
Sbjct: 81 GTIDFEEFLTMMTAKM 96
Score = 29.3 bits (64), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 17/63 (26%)
Query: 84 ELLEAFQVFDKDGEKLSD-----------------QEVDELIGLADENNTGHVRYEEFAK 126
E+ EAF +FD DG D +E+ ++I D++ +G + +EEF
Sbjct: 31 EIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFLT 90
Query: 127 VMT 129
+MT
Sbjct: 91 MMT 93
>pdb|1M46|A Chain A, Crystal Structure Of Mlc1p Bound To Iq4 Of Myo2p, A Class
V Myosin
pdb|1M45|A Chain A, Crystal Structure Of Mlc1p Bound To Iq2 Of Myo2p, A Class
V Myosin
pdb|1N2D|A Chain A, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
pdb|1N2D|B Chain B, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
Length = 148
Score = 67.0 bits (162), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 70/135 (51%), Gaps = 23/135 (17%)
Query: 13 KEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLK-EVDPDDVGSVDFESFLKL 71
K+ F LFDK G G I +G +RAIG NPT Q ++D++ + D S+ + L
Sbjct: 7 KDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLDQITGL 66
Query: 72 MANHIPNVDSTA-----ELLEAFQVFDKD-----------------GEKLSDQEVDELIG 109
+ + +D+T + ++AFQVFDK+ GEKL+D EVDEL+
Sbjct: 67 IEVNEKELDATTKAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLK 126
Query: 110 LADENNTGHVRYEEF 124
+ ++ G + Y++F
Sbjct: 127 GVEVDSNGEIDYKKF 141
Score = 38.9 bits (89), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 37/59 (62%)
Query: 11 EWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVDFESFL 69
++ +AF +FDK +GK+ + ++ +G T+ E+++LLK V+ D G +D++ F+
Sbjct: 84 DFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFI 142
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 65.9 bits (159), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 67/140 (47%), Gaps = 16/140 (11%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSV 63
L EE+I KE F + D + SG I + ++ +G E E++DL+ D D G++
Sbjct: 4 LSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTI 63
Query: 64 DFESFLKLMANHIPNVDSTAELLEAFQVFDKDGE---------------KLSDQEVDELI 108
D+ F+ H+ ++ L+ AF FDKDG L D +D++I
Sbjct: 64 DYGEFIAATV-HLNKLEREENLVSAFSYFDKDGSGYITLDEIQQACKDFGLDDIHIDDMI 122
Query: 109 GLADENNTGHVRYEEFAKVM 128
D++N G + Y EFA +M
Sbjct: 123 KEIDQDNDGQIDYGEFAAMM 142
>pdb|3J04|B Chain B, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|E Chain E, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 143
Score = 65.5 bits (158), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 71/142 (50%), Gaps = 21/142 (14%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSV 63
D+ QI E+KEAF + D+N G I + + ++ ++G+NPT++ LE ++ E G +
Sbjct: 1 FDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASMGKNPTDEYLEGMMSEA----PGPI 56
Query: 64 DFESFLKLMANHIPNVDSTAELLEAFQVFDKD-----------------GEKLSDQEVDE 106
+F FL + + D + AF FD++ G++ +D+EVDE
Sbjct: 57 NFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEASGFIHEDHLRELLTTMGDRFTDEEVDE 116
Query: 107 LIGLADENNTGHVRYEEFAKVM 128
+ A + G+ Y EF +++
Sbjct: 117 MYREAPIDKKGNFNYVEFTRIL 138
>pdb|4GJG|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant D2n/v28i/l29q/g30d (niqd) In
Complex With Cadmium
Length = 89
Score = 65.1 bits (157), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 51/76 (67%), Gaps = 1/76 (1%)
Query: 4 LDEEQITEWKEAFALFDKNGS-GKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGS 62
L EEQ E+K AF +F ++ G I +K +G VMR +G+NPT +EL++++ EVD D G+
Sbjct: 12 LTEEQKNEFKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGT 71
Query: 63 VDFESFLKLMANHIPN 78
VDF+ FL +M + +
Sbjct: 72 VDFDEFLVMMVRCMKD 87
Score = 25.4 bits (54), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Query: 81 STAELLEAFQVFDKDGEKLSDQEVDELIGLADENNTGHVRYEEFAKVMT 129
ST EL + ++ G+ + +E+ E+I DE+ +G V ++EF +M
Sbjct: 37 STKELGKVMRML---GQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMV 82
>pdb|4GJF|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant L29q In Complex With Cadmium
Length = 89
Score = 64.7 bits (156), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Query: 4 LDEEQITEWKEAFALFDKNGS-GKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGS 62
L EEQ E+K AF +F + G I +K +G VMR +G+NPT +EL++++ EVD D G+
Sbjct: 12 LTEEQKNEFKAAFDIFVQGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGT 71
Query: 63 VDFESFLKLMANHIPN 78
VDF+ FL +M + +
Sbjct: 72 VDFDEFLVMMVRCMKD 87
Score = 25.4 bits (54), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Query: 81 STAELLEAFQVFDKDGEKLSDQEVDELIGLADENNTGHVRYEEFAKVMT 129
ST EL + ++ G+ + +E+ E+I DE+ +G V ++EF +M
Sbjct: 37 STKELGKVMRML---GQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMV 82
>pdb|2W4A|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 145
Score = 64.3 bits (155), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 76/141 (53%), Gaps = 22/141 (15%)
Query: 7 EQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGS--VD 64
++I ++KEAF LFD+ G KI VG ++RA+G+NPT E+ +L +++ + +
Sbjct: 1 DEINDFKEAFLLFDRTGDAKITLSQVGDIVRALGQNPTNAEINKILGNPSKEEMNAKKIT 60
Query: 65 FESFLKLMANHIPNVDSTA--ELLEAFQVFDKD-----------------GEKLSDQEVD 105
FE FL ++ N D + +E +VFDK+ GEK++++EV+
Sbjct: 61 FEEFLPMLQAAANNKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVE 120
Query: 106 ELIGLADENNTGHVRYEEFAK 126
EL+ E++ G + YE F K
Sbjct: 121 ELMK-GQEDSNGCINYEAFVK 140
Score = 32.0 bits (71), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 5 DEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVD 64
D+ ++ E +FDK G+G ++ + V+ +G TE+E+E+L+K + D G ++
Sbjct: 76 DQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELMKGQE-DSNGCIN 134
Query: 65 FESFLKLMANHIPNV 79
+E+F+K HI +V
Sbjct: 135 YEAFVK----HIMSV 145
>pdb|1R2U|A Chain A, Nmr Structure Of The N Domain Of Trout Cardiac Troponin
C At 30 C
pdb|1R6P|A Chain A, Nmr Structure Of The N-Terminal Domain Of Trout Cardiac
Troponin C At 7 C
Length = 89
Score = 63.9 bits (154), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 51/76 (67%), Gaps = 1/76 (1%)
Query: 4 LDEEQITEWKEAFALFDKNG-SGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGS 62
L +EQ E+K AF +F ++ G I +K +G VMR +G+NPT +EL++++ EVD D G+
Sbjct: 12 LTDEQKNEFKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGT 71
Query: 63 VDFESFLKLMANHIPN 78
VDF+ FL +M + +
Sbjct: 72 VDFDEFLVMMVRCMKD 87
Score = 25.4 bits (54), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Query: 81 STAELLEAFQVFDKDGEKLSDQEVDELIGLADENNTGHVRYEEFAKVMT 129
ST EL + ++ G+ + +E+ E+I DE+ +G V ++EF +M
Sbjct: 37 STKELGKVMRML---GQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMV 82
>pdb|2CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr,
30 Structures
Length = 89
Score = 63.9 bits (154), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 4 LDEEQITEWKEAFALFDKNGS-GKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGS 62
L EEQ E+K AF +F G I +K +G VMR +G+NPT +EL++++ EVD D G+
Sbjct: 12 LTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGT 71
Query: 63 VDFESFLKLMANHIPN 78
VDF+ FL +M + +
Sbjct: 72 VDFDEFLVMMVRSMKD 87
>pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
pdb|2GGM|B Chain B, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
Length = 172
Score = 63.9 bits (154), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 74/144 (51%), Gaps = 17/144 (11%)
Query: 1 KLTLDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDV 60
K L EEQ E +EAF LFD +G+G I K + RA+G P ++E++ + E+D +
Sbjct: 22 KPELTEEQKQEIREAFDLFDADGTGTIDVKELKVAXRALGFEPKKEEIKKXISEIDKEGT 81
Query: 61 GSVDFESFLKLMANHIPNVDSTAELLEAFQVFDKD-----------------GEKLSDQE 103
G +F FL + D+ E+L+AF++FD D GE L+D+E
Sbjct: 82 GKXNFGDFLTVXTQKXSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEE 141
Query: 104 VDELIGLADENNTGHVRYEEFAKV 127
+ E I AD + G V +EF ++
Sbjct: 142 LQEXIDEADRDGDGEVSEQEFLRI 165
>pdb|2KFX|T Chain T, Structure Of The N-Terminal Domain Of Human Cardiac
Troponin C Bound To Calcium Ion And To The Inhibitor W7
Length = 89
Score = 63.5 bits (153), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 4 LDEEQITEWKEAFALFDKNGS-GKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGS 62
L EEQ E+K AF +F G I +K +G VMR +G+NPT +EL++++ EVD D G+
Sbjct: 12 LTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGT 71
Query: 63 VDFESFLKLMANHIPN 78
VDF+ FL +M + +
Sbjct: 72 VDFDEFLVMMVRSMKD 87
Score = 25.4 bits (54), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Query: 81 STAELLEAFQVFDKDGEKLSDQEVDELIGLADENNTGHVRYEEFAKVMT 129
ST EL + ++ G+ + +E+ E+I DE+ +G V ++EF +M
Sbjct: 37 STKELGKVMRML---GQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMV 82
>pdb|1WRK|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRK|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRL|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|C Chain C, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|D Chain D, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|E Chain E, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|F Chain F, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
Length = 88
Score = 63.5 bits (153), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 4 LDEEQITEWKEAFALFDKNGS-GKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGS 62
L EEQ E+K AF +F G I +K +G VMR +G+NPT +EL++++ EVD D G+
Sbjct: 12 LTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGT 71
Query: 63 VDFESFLKLMANHIPN 78
VDF+ FL +M + +
Sbjct: 72 VDFDEFLVMMVRSMKD 87
Score = 25.4 bits (54), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Query: 81 STAELLEAFQVFDKDGEKLSDQEVDELIGLADENNTGHVRYEEFAKVMT 129
ST EL + ++ G+ + +E+ E+I DE+ +G V ++EF +M
Sbjct: 37 STKELGKVMRML---GQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMV 82
>pdb|1M8Q|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|U Chain U, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 147
Score = 63.5 bits (153), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 73/137 (53%), Gaps = 22/137 (16%)
Query: 11 EWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDV--GSVDFESF 68
++KEAF LFD+ G KI + VG + RA+G+NPT E+ +L +++ ++ FE F
Sbjct: 7 DFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAAAITFEEF 66
Query: 69 LKLMANHIPNVDSTA--ELLEAFQVFDKD-----------------GEKLSDQEVDELIG 109
L ++ N D + +E +VFDK+ GEK++++EV+EL+
Sbjct: 67 LPMLQAAANNKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELMK 126
Query: 110 LADENNTGHVRYEEFAK 126
E++ G + YE F K
Sbjct: 127 -GQEDSNGCINYEAFVK 142
Score = 32.3 bits (72), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 5 DEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVD 64
D+ ++ E +FDK G+G ++ + V+ +G TE+E+E+L+K + D G ++
Sbjct: 78 DQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELMKGQE-DSNGCIN 136
Query: 65 FESFLKLMANHIPNV 79
+E+F+K HI +V
Sbjct: 137 YEAFVK----HIMSV 147
>pdb|2MYS|C Chain C, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
Length = 149
Score = 63.5 bits (153), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 73/137 (53%), Gaps = 22/137 (16%)
Query: 11 EWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDV--GSVDFESF 68
++KEAF LFD+ G KI + VG + RA+G+NPT E+ +L +++ ++ FE F
Sbjct: 9 DFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAAAITFEEF 68
Query: 69 LKLMANHIPNVDSTA--ELLEAFQVFDKD-----------------GEKLSDQEVDELIG 109
L ++ N D + +E +VFDK+ GEK++++EV+EL+
Sbjct: 69 LPMLQAAANNKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELMK 128
Query: 110 LADENNTGHVRYEEFAK 126
E++ G + YE F K
Sbjct: 129 -GQEDSNGCINYEAFVK 144
Score = 32.3 bits (72), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 5 DEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVD 64
D+ ++ E +FDK G+G ++ + V+ +G TE+E+E+L+K + D G ++
Sbjct: 80 DQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELMKGQE-DSNGCIN 138
Query: 65 FESFLKLMANHIPNV 79
+E+F+K HI +V
Sbjct: 139 YEAFVK----HIMSV 149
>pdb|1MXL|C Chain C, Structure Of Cardiac Troponin C-troponin I Complex
pdb|1LXF|C Chain C, Structure Of The Regulatory N-Domain Of Human Cardiac
Troponin C In Complex With Human Cardiac
Troponin-I(147- 163) And Bepridil
pdb|1AP4|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Saturated State, Nmr, 40 Structures
pdb|1SPY|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Free State, Nmr, 40 Structures
pdb|2KRD|C Chain C, Solution Structure Of The Regulatory Domain Of Human
Cardiac C In Complex With The Switch Region Of Cardiac
Troponin I A
pdb|2L1R|A Chain A, The Structure Of The Calcium-Sensitizer, Dfbp-O, In
Complex With The N-Domain Of Troponin C And The Switch
Region Of Troponin I
pdb|3SD6|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.4
Resolution.
pdb|3SWB|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.7 A
Resolution
pdb|4GJE|A Chain A, Crystal Structure Of The Refolded Amino-terminal Domain
Of Human Cardiac Troponin C In Complex With Cadmium
Length = 89
Score = 63.2 bits (152), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 4 LDEEQITEWKEAFALFDKNGS-GKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGS 62
L EEQ E+K AF +F G I +K +G VMR +G+NPT +EL++++ EVD D G+
Sbjct: 12 LTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGT 71
Query: 63 VDFESFLKLMANHIPN 78
VDF+ FL +M + +
Sbjct: 72 VDFDEFLVMMVRCMKD 87
Score = 25.4 bits (54), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Query: 81 STAELLEAFQVFDKDGEKLSDQEVDELIGLADENNTGHVRYEEFAKVMT 129
ST EL + ++ G+ + +E+ E+I DE+ +G V ++EF +M
Sbjct: 37 STKELGKVMRML---GQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMV 82
>pdb|2BL0|C Chain C, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 142
Score = 62.8 bits (151), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 62/140 (44%), Gaps = 18/140 (12%)
Query: 6 EEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVDF 65
++Q++E+KEAF LFD +G I + + TV++ G ++ E D G + F
Sbjct: 2 DDQVSEFKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQF 61
Query: 66 ESFLKLMANHIPNVDSTAELLEAFQVFDKD-----------------GEKLSDQEVDELI 108
FL +M + S L +AF+ FD + G++L E E +
Sbjct: 62 PEFLSMMGRRMKQTTSEDILRQAFRTFDPEGTGYIPKAALQDALLNLGDRLKPHEFAEFL 121
Query: 109 GLADENNTGHVRYEEFAKVM 128
G+ E G +RY+ F M
Sbjct: 122 GIT-ETEKGQIRYDNFINTM 140
>pdb|2JXL|A Chain A, Solution Structure Of Cardiac N-Domain Troponin C Mutant
F77w-V82a
Length = 89
Score = 62.4 bits (150), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Query: 4 LDEEQITEWKEAFALFDKNGS-GKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGS 62
L EEQ E+K AF +F G I +K +G VMR +G+NPT +EL++++ EVD D G+
Sbjct: 12 LTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGT 71
Query: 63 VDFESFLKLMANHIPN 78
VDF+ +L +MA + +
Sbjct: 72 VDFDEWLVMMARCMKD 87
>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
pdb|2AAO|B Chain B, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
Length = 166
Score = 62.4 bits (150), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 66/137 (48%), Gaps = 16/137 (11%)
Query: 3 TLDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGS 62
+L EE+I KE F D + SG+I + + ++ +G N E E+ DL + D D+ G+
Sbjct: 20 SLSEEEIAGLKEXFNXIDADKSGQITFEELKAGLKRVGANLKESEILDLXQAADVDNSGT 79
Query: 63 VDFESFLKLMANHIPNVDSTAELLEAFQVFDKDGE---------------KLSDQEVDEL 107
+D++ F+ H+ ++ L AF FDKDG + D ++EL
Sbjct: 80 IDYKEFIAATL-HLNKIEREDHLFAAFTYFDKDGSGYITPDELQQACEEFGVEDVRIEEL 138
Query: 108 IGLADENNTGHVRYEEF 124
D++N G + Y EF
Sbjct: 139 XRDVDQDNDGRIDYNEF 155
Score = 33.1 bits (74), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Query: 15 AFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVDFESFL 69
AF FDK+GSG I + G +E+L ++VD D+ G +D+ F+
Sbjct: 104 AFTYFDKDGSGYITPDELQQACEEFGVEDVR--IEELXRDVDQDNDGRIDYNEFV 156
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 62.0 bits (149), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 48/70 (68%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSV 63
+ E+++ E +EAF +FD++G+G I + +GT MR++G P E ELE +++ +D D G V
Sbjct: 30 IPEDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQV 89
Query: 64 DFESFLKLMA 73
DFE F+ L+
Sbjct: 90 DFEEFVTLLG 99
Score = 26.6 bits (57), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 17/66 (25%)
Query: 80 DSTAELLEAFQVFDKDGEK-LSDQ----------------EVDELIGLADENNTGHVRYE 122
D E+ EAF+VFD+DG +S Q E++ +I D + G V +E
Sbjct: 33 DELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFE 92
Query: 123 EFAKVM 128
EF ++
Sbjct: 93 EFVTLL 98
>pdb|3DTP|E Chain E, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|F Chain F, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 196
Score = 61.2 bits (147), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 68/140 (48%), Gaps = 20/140 (14%)
Query: 6 EEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVDF 65
+ Q+ E+KEAF L D++ G I + ++GR TEQEL+ ++ E G ++F
Sbjct: 53 QHQVQEFKEAFQLIDQDKDGFISKNDIRATFDSLGRLCTEQELDSMVAEA----PGPINF 108
Query: 66 ESFLKLMANHIPNVDSTAELLEAFQVFDKD----------------GEKLSDQEVDELIG 109
FL + + I D ++ AF +FD+ GEK S EVD+ +
Sbjct: 109 TMFLTIFGDRIAGTDEEDVIVNAFNLFDEGDGKCKEETLKRSLTTWGEKFSQDEVDQALS 168
Query: 110 LADENNTGHVRYEEFAKVMT 129
A + G + ++FA+++T
Sbjct: 169 EAPIDGNGLIDIKKFAQILT 188
>pdb|2JNF|A Chain A, Solution Structure Of Fly Troponin C, Isoform F1
Length = 158
Score = 61.2 bits (147), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 71/148 (47%), Gaps = 22/148 (14%)
Query: 4 LDEEQITEWKEAFALFDK-NGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGS 62
L Q+ + AF F+ GSG++ + +G ++ +G T+ + L+ E DP G
Sbjct: 7 LSSNQVKLLETAFRDFETPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFGNGD 66
Query: 63 VDFESF----LKLMANHIPNVDSTAELLEAFQVFDKDG-----------------EKLSD 101
+DF+SF + + + EL EAF+++DK+G E LS
Sbjct: 67 IDFDSFKIIGARFLGEEVNPEQMQQELREAFRLYDKEGNGYISTDVMREILAELDETLSS 126
Query: 102 QEVDELIGLADENNTGHVRYEEFAKVMT 129
+++D +I D + +G V +EEF VMT
Sbjct: 127 EDLDAMIDEIDADGSGTVDFEEFMGVMT 154
>pdb|2KGB|C Chain C, Nmr Solution Of The Regulatory Domain Cardiac
F77w-Troponin C In Complex With The Cardiac Troponin I
144-163 Switch Peptide
Length = 89
Score = 60.5 bits (145), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 4 LDEEQITEWKEAFALFDKNGS-GKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGS 62
L EEQ E+K AF +F G I +K +G VMR +G+NPT +EL++++ EVD D G+
Sbjct: 12 LTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGT 71
Query: 63 VDFESFLKLMANHIPN 78
VDF+ +L +M + +
Sbjct: 72 VDFDEWLVMMVRCMKD 87
>pdb|2OS8|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 157
Score = 60.1 bits (144), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 76/151 (50%), Gaps = 28/151 (18%)
Query: 4 LDEEQITEWKEAFALFD--KNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVG 61
L +++I + KE F LFD G + + +G V R +G NP ED+ +G
Sbjct: 4 LSQDEIDDLKEVFELFDFWDGRDGAVDAFKIGDVCRCLGINPRN---EDVFAVGGTHKMG 60
Query: 62 --SVDFESFLKLMANHIPNVDST-AELLEAFQVFDKDG-----------------EKLSD 101
S+ FE FL + T A+ +EAF+ FD++G E+LSD
Sbjct: 61 EKSLPFEEFLPAYEGLMDCEQGTYADYMEAFKTFDREGQGFISGAELRHVLSGLGERLSD 120
Query: 102 QEVDELIGLAD--ENNTGHVRYEEFA-KVMT 129
+EVDE+I L D E+ G+V+YEEF KVMT
Sbjct: 121 EEVDEIINLTDLQEDLEGNVKYEEFVKKVMT 151
>pdb|3PN7|C Chain C, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|F Chain F, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|C Chain C, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|F Chain F, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TUY|C Chain C, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
pdb|3TUY|F Chain F, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
Length = 156
Score = 60.1 bits (144), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 76/151 (50%), Gaps = 28/151 (18%)
Query: 4 LDEEQITEWKEAFALFD--KNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVG 61
L +++I + KE F LFD G + + +G V R +G NP ED+ +G
Sbjct: 3 LSQDEIDDLKEVFELFDFWDGRDGAVDAFKIGDVCRCLGINPRN---EDVFAVGGTHKMG 59
Query: 62 --SVDFESFLKLMANHIPNVDST-AELLEAFQVFDKDG-----------------EKLSD 101
S+ FE FL + T A+ +EAF+ FD++G E+LSD
Sbjct: 60 EKSLPFEEFLPAYEGLMDCEQGTYADYMEAFKTFDREGQGFISGAELRHVLSGLGERLSD 119
Query: 102 QEVDELIGLAD--ENNTGHVRYEEFA-KVMT 129
+EVDE+I L D E+ G+V+YEEF KVMT
Sbjct: 120 EEVDEIINLTDLQEDLEGNVKYEEFVKKVMT 150
>pdb|1ZMZ|A Chain A, Solution Structure Of The N-Terminal Domain (M1-S98) Of
Human Centrin 2
Length = 98
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%)
Query: 1 KLTLDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDV 60
K L EEQ E +EAF LFD +G+G I K + MRA+G P ++E++ ++ E+D +
Sbjct: 22 KPELTEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGT 81
Query: 61 GSVDFESFLKLMANHI 76
G ++F FL +M +
Sbjct: 82 GKMNFGDFLTVMTQKM 97
Score = 26.9 bits (58), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 17/63 (26%)
Query: 84 ELLEAFQVFDKDGEKLSD-----------------QEVDELIGLADENNTGHVRYEEFAK 126
E+ EAF +FD DG D +E+ ++I D+ TG + + +F
Sbjct: 32 EIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLT 91
Query: 127 VMT 129
VMT
Sbjct: 92 VMT 94
>pdb|3FWB|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|E Chain E, Sac3:sus1:cdc31 Complex
pdb|3FWC|I Chain I, Sac3:sus1:cdc31 Complex
pdb|3FWC|M Chain M, Sac3:sus1:cdc31 Complex
Length = 161
Score = 57.4 bits (137), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 65/141 (46%), Gaps = 17/141 (12%)
Query: 6 EEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVDF 65
EEQ E EAF+LFD N G + + M+A+G ++E+ DL+ E D + + +
Sbjct: 19 EEQKQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEGRHLMKY 78
Query: 66 ESFLKLMANHIPNVDSTAELLEAFQVFDKD-----------------GEKLSDQEVDELI 108
+ F +M I D E+ AFQ+FD D GE L+D+E+ +I
Sbjct: 79 DDFYIVMGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAMI 138
Query: 109 GLADENNTGHVRYEEFAKVMT 129
D + G + EF + T
Sbjct: 139 EEFDLDGDGEINENEFIAICT 159
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 39/71 (54%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSV 63
L + + E K AF LFD + +GKI K + V + +G T++EL +++E D D G +
Sbjct: 90 LKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAMIEEFDLDGDGEI 149
Query: 64 DFESFLKLMAN 74
+ F+ + +
Sbjct: 150 NENEFIAICTD 160
>pdb|2HF5|A Chain A, The Structure And Function Of A Novel Two-Site Calcium-
Binding Fragment Of Calmodulin
Length = 68
Score = 57.0 bits (136), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 36/50 (72%)
Query: 47 ELEDLLKEVDPDDVGSVDFESFLKLMANHIPNVDSTAELLEAFQVFDKDG 96
EL+D++ EVD D G++DF FL +MA + + DS E+ EAF+VFDKDG
Sbjct: 2 ELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDG 51
Score = 28.9 bits (63), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 11 EWKEAFALFDKNGSGKIVSKYVGTVMRAIG 40
E +EAF +FDK+G+G I + + VM +G
Sbjct: 39 EIREAFRVFDKDGNGYISAAELRHVMTNLG 68
>pdb|2K7B|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 N-Domain
Length = 76
Score = 57.0 bits (136), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 45/71 (63%)
Query: 3 TLDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGS 62
+L E+I E +EAF FDK+ G I + +G MR +G PTE EL +L ++++ + G
Sbjct: 3 SLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGH 62
Query: 63 VDFESFLKLMA 73
VDF+ F++LM
Sbjct: 63 VDFDDFVELMG 73
>pdb|2EC6|C Chain C, Placopecten Striated Muscle Myosin Ii
Length = 156
Score = 56.6 bits (135), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 73/147 (49%), Gaps = 27/147 (18%)
Query: 4 LDEEQITEWKEAFALFD--KNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVG 61
L +++I + K+ F LFD G + + +G V R +G NP ED+ +G
Sbjct: 3 LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRN---EDVFAVGGTHKMG 59
Query: 62 --SVDFESFLKLMANHIPNVDST-AELLEAFQVFDKDG-----------------EKLSD 101
S+ FE FL + T A+ +EAF+ FD++G E+LSD
Sbjct: 60 EKSLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLSGLGERLSD 119
Query: 102 QEVDELIGLAD--ENNTGHVRYEEFAK 126
+EVDE+I L D E+ G+V+YEEF K
Sbjct: 120 EEVDEIINLTDLQEDLEGNVKYEEFVK 146
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 4 LDEEQIT--EWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDL--LKEVDPDD 59
+D EQ T ++ EAF FD+ G G I + V+ +G +++E++++ L ++ D
Sbjct: 76 MDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLSGLGERLSDEEVDEIINLTDLQEDL 135
Query: 60 VGSVDFESFL-KLMANHIPN 78
G+V +E F+ K+MA P+
Sbjct: 136 EGNVKYEEFVKKVMAGPYPD 155
>pdb|3I5G|B Chain B, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|B Chain B, The Crystal Structure Of Rigor Like Squid Myosin S1 In
The Absence Of Nucleotide
pdb|3I5I|B Chain B, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|B Chain B, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 153
Score = 56.2 bits (134), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 4/97 (4%)
Query: 1 KLTLDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDV 60
++ L + Q+ E KEAF + D++ G I + + + ++GR P + EL +LKE
Sbjct: 7 RVKLSQRQMQELKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDDELNAMLKEC----P 62
Query: 61 GSVDFESFLKLMANHIPNVDSTAELLEAFQVFDKDGE 97
G ++F +FL L + D L AF +FD+DG+
Sbjct: 63 GQLNFTAFLTLFGEKVSGTDPEDALRNAFSMFDEDGQ 99
Score = 31.2 bits (69), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 12/43 (27%), Positives = 29/43 (67%)
Query: 13 KEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEV 55
+ AF++FD++G G I Y+ ++ +G N +++E++++ K+
Sbjct: 88 RNAFSMFDEDGQGFIPEDYLKDLLENMGDNFSKEEIKNVWKDA 130
>pdb|2OS8|B Chain B, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|B Chain B, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 157
Score = 55.8 bits (133), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 65/119 (54%), Gaps = 6/119 (5%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSV 63
L ++QI E KEAF + D+N G I + + ++GR P ++EL +LKE G +
Sbjct: 13 LPQKQIQEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLKEA----PGPL 68
Query: 64 DFESFLKLMANHIPNVDSTAELLEAFQVFDK-DGEKLSDQEVDELI-GLADENNTGHVR 120
+F FL + ++ + DS + AF +FD+ D +KL+ + + +L+ + D N +R
Sbjct: 69 NFTMFLSIFSDKLSGTDSEETIRNAFGMFDELDTKKLNIEYIKDLLENMGDNFNKDEMR 127
Score = 26.9 bits (58), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 15/60 (25%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 13 KEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVDFESFLKLM 72
+ AF +FD+ + K+ +Y+ ++ +G N + E+ KE P + G D+ F+ ++
Sbjct: 91 RNAFGMFDELDTKKLNIEYIKDLLENMGDNFNKDEMRMTFKEA-PVEGGKFDYVRFVAMI 149
>pdb|3RV5|A Chain A, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|B Chain B, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|C Chain C, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|D Chain D, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
Length = 89
Score = 55.8 bits (133), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Query: 4 LDEEQITEWKEAFALFDKNG-SGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGS 62
L EEQ E+K AF +F G I +K +G V R +G+NPT +EL++ + EVD D G+
Sbjct: 12 LTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVXRXLGQNPTPEELQEXIDEVDEDGSGT 71
Query: 63 VDFESFL 69
VDF+ FL
Sbjct: 72 VDFDEFL 78
>pdb|1JC2|A Chain A, Complex Of The C-Domain Of Troponin C With Residues 1-40
Of Troponin I
Length = 76
Score = 55.5 bits (132), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 41/62 (66%)
Query: 11 EWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVDFESFLK 70
E F +FDKN G I + +G ++RA G + E+++EDL+K+ D ++ G +DF+ FLK
Sbjct: 11 ELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEFLK 70
Query: 71 LM 72
+M
Sbjct: 71 MM 72
Score = 32.3 bits (72), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 35/65 (53%), Gaps = 17/65 (26%)
Query: 81 STAELLEAFQVFDKD-----------------GEKLSDQEVDELIGLADENNTGHVRYEE 123
S EL F++FDK+ GE + ++++++L+ +D+NN G + ++E
Sbjct: 8 SEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDE 67
Query: 124 FAKVM 128
F K+M
Sbjct: 68 FLKMM 72
>pdb|2BL0|B Chain B, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 145
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 67/136 (49%), Gaps = 21/136 (15%)
Query: 11 EWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVDFESFLK 70
+ +E F +FDK+ GK+ + +G+ +R++G+NPT EL + +++ + D +F
Sbjct: 6 QIQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTIKGQLNAKE---FDLATFKT 62
Query: 71 LMANHIPN-VDSTAELLEAFQVFDKD-----------------GEKLSDQEVDELIGLAD 112
+ I + + E+L+AF+ DK+ G+ L+ EV+EL+
Sbjct: 63 VYRKPIKTPTEQSKEMLDAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELMKEVS 122
Query: 113 ENNTGHVRYEEFAKVM 128
+ G + YE F ++
Sbjct: 123 VSGDGAINYESFVDML 138
Score = 43.5 bits (101), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%)
Query: 7 EQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVDFE 66
EQ E +AF DK G+G I + ++ +G T E+E+L+KEV G++++E
Sbjct: 73 EQSKEMLDAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELMKEVSVSGDGAINYE 132
Query: 67 SFLKLMANHIP 77
SF+ ++ P
Sbjct: 133 SFVDMLVTGYP 143
>pdb|2JOJ|A Chain A, Nmr Solution Structure Of N-Terminal Domain Of Euplotes
Octocarinatus Centrin
Length = 77
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 43/77 (55%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSV 63
L EEQ E KEAF LFD N +G I + MRA+G + + E+ +L+ E D + G +
Sbjct: 1 LSEEQKQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYI 60
Query: 64 DFESFLKLMANHIPNVD 80
F+ FL +M I N D
Sbjct: 61 GFDDFLDIMTEKIKNRD 77
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin Bound
To The Iq Motif Of Nav1.2
Length = 73
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 39/67 (58%), Gaps = 17/67 (25%)
Query: 80 DSTAELLEAFQVFDKDG-----------------EKLSDQEVDELIGLADENNTGHVRYE 122
DS EL+EAF+VFD+DG EKL+D EVDE+I AD + GH+ YE
Sbjct: 5 DSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYE 64
Query: 123 EFAKVMT 129
EF ++M
Sbjct: 65 EFVRMMV 71
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 42/64 (65%)
Query: 11 EWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVDFESFLK 70
E EAF +FD++G+G I + + VM +G T+ E++++++E D D G +++E F++
Sbjct: 9 ELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVR 68
Query: 71 LMAN 74
+M +
Sbjct: 69 MMVS 72
>pdb|1KK8|C Chain C, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 154
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 73/147 (49%), Gaps = 27/147 (18%)
Query: 4 LDEEQITEWKEAFALFD--KNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVG 61
L +++I + K+ F LFD G + + +G V R +G NP ED+ +G
Sbjct: 3 LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRN---EDVFAVGGTHKMG 59
Query: 62 --SVDFESFLKLMANHIPNVDST-AELLEAFQVFDKDG-----------------EKLSD 101
S+ FE FL + T A+ +EAF+ FD++G E+LSD
Sbjct: 60 EKSLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSD 119
Query: 102 QEVDELIGLAD--ENNTGHVRYEEFAK 126
++VDE+I L D E+ G+V+YE+F K
Sbjct: 120 EDVDEIIKLTDLQEDLEGNVKYEDFVK 146
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Query: 4 LDEEQIT--EWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVD--PDD 59
+D EQ T ++ EAF FD+ G G I + V+ A+G +++++++++K D D
Sbjct: 76 MDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDL 135
Query: 60 VGSVDFESFL-KLMANHIP 77
G+V +E F+ K+MA P
Sbjct: 136 EGNVKYEDFVKKVMAGPYP 154
>pdb|1WDC|C Chain C, Scallop Myosin Regulatory Domain
pdb|1B7T|Z Chain Z, Myosin Digested By Papain
pdb|1KK7|Z Chain Z, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|C Chain C, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|C Chain C, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|C Chain C, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Z Chain Z, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|Z Chain Z, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|C Chain C, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JVT|C Chain C, Calcium-Bound Scallop Myosin Regulatory Domain (Lever Arm)
With Reconstituted Complete Light Chains
Length = 156
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 73/147 (49%), Gaps = 27/147 (18%)
Query: 4 LDEEQITEWKEAFALFD--KNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVG 61
L +++I + K+ F LFD G + + +G V R +G NP ED+ +G
Sbjct: 3 LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRN---EDVFAVGGTHKMG 59
Query: 62 --SVDFESFLKLMANHIPNVDST-AELLEAFQVFDKDG-----------------EKLSD 101
S+ FE FL + T A+ +EAF+ FD++G E+LSD
Sbjct: 60 EKSLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSD 119
Query: 102 QEVDELIGLAD--ENNTGHVRYEEFAK 126
++VDE+I L D E+ G+V+YE+F K
Sbjct: 120 EDVDEIIKLTDLQEDLEGNVKYEDFVK 146
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 47/80 (58%), Gaps = 5/80 (6%)
Query: 4 LDEEQIT--EWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVD--PDD 59
+D EQ T ++ EAF FD+ G G I + V+ A+G +++++++++K D D
Sbjct: 76 MDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDL 135
Query: 60 VGSVDFESFL-KLMANHIPN 78
G+V +E F+ K+MA P+
Sbjct: 136 EGNVKYEDFVKKVMAGPYPD 155
>pdb|1DFK|Z Chain Z, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Z Chain Z, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|X Chain X, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
Length = 152
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 73/147 (49%), Gaps = 27/147 (18%)
Query: 4 LDEEQITEWKEAFALFD--KNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVG 61
L +++I + K+ F LFD G + + +G V R +G NP ED+ +G
Sbjct: 1 LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRN---EDVFAVGGTHKMG 57
Query: 62 --SVDFESFLKLMANHIPNVDST-AELLEAFQVFDKDG-----------------EKLSD 101
S+ FE FL + T A+ +EAF+ FD++G E+LSD
Sbjct: 58 EKSLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSD 117
Query: 102 QEVDELIGLAD--ENNTGHVRYEEFAK 126
++VDE+I L D E+ G+V+YE+F K
Sbjct: 118 EDVDEIIKLTDLQEDLEGNVKYEDFVK 144
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Query: 4 LDEEQIT--EWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVD--PDD 59
+D EQ T ++ EAF FD+ G G I + V+ A+G +++++++++K D D
Sbjct: 74 MDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDL 133
Query: 60 VGSVDFESFL-KLMANHIP 77
G+V +E F+ K+MA P
Sbjct: 134 EGNVKYEDFVKKVMAGPYP 152
>pdb|1DFK|Y Chain Y, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Y Chain Y, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|W Chain W, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
Length = 139
Score = 53.1 bits (126), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 65/119 (54%), Gaps = 6/119 (5%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSV 63
L ++QI E KEAF++ D + G + + + + +GR P ++EL +LKE G +
Sbjct: 1 LPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKEAP----GPL 56
Query: 64 DFESFLKLMANHIPNVDSTAELLEAFQVFD-KDGEKLSDQEVDELI-GLADENNTGHVR 120
+F FL + ++ + DS + AF +FD ++ +KL+ + + +L+ + D N +R
Sbjct: 57 NFTMFLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMR 115
Score = 28.5 bits (62), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 13 KEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVDFESFLKLM 72
+ AFA+FD+ + K+ +Y+ ++ +G N + E+ KE P + G D+ F ++
Sbjct: 79 RNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEA-PVEGGKFDYVKFTAMI 137
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin And 1mm
Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin
Length = 74
Score = 53.1 bits (126), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 41/71 (57%), Gaps = 17/71 (23%)
Query: 76 IPNVDSTAELLEAFQVFDKDG-----------------EKLSDQEVDELIGLADENNTGH 118
+ + DS E+ EAF+VFDKDG EKL+D+EVDE+I AD + G
Sbjct: 2 MKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 61
Query: 119 VRYEEFAKVMT 129
V YEEF ++MT
Sbjct: 62 VNYEEFVQMMT 72
Score = 52.0 bits (123), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 43/63 (68%)
Query: 11 EWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVDFESFLK 70
E +EAF +FDK+G+G I + + VM +G T++E++++++E D D G V++E F++
Sbjct: 10 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 69
Query: 71 LMA 73
+M
Sbjct: 70 MMT 72
>pdb|1SCM|B Chain B, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 145
Score = 53.1 bits (126), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 65/119 (54%), Gaps = 6/119 (5%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSV 63
L ++QI E KEAF++ D + G + + + + +GR P ++EL +LKE G +
Sbjct: 1 LPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKEA----PGPL 56
Query: 64 DFESFLKLMANHIPNVDSTAELLEAFQVFD-KDGEKLSDQEVDELI-GLADENNTGHVR 120
+F FL + ++ + DS + AF +FD ++ +KL+ + + +L+ + D N +R
Sbjct: 57 NFTMFLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMR 115
Score = 28.9 bits (63), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 13 KEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVDFESFLKLM 72
+ AFA+FD+ + K+ +Y+ ++ +G N + E+ KE P + G D+ F ++
Sbjct: 79 RNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEA-PVEGGKFDYVKFTAMI 137
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin Carboxy-Terminal
Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 53.1 bits (126), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 41/71 (57%), Gaps = 17/71 (23%)
Query: 76 IPNVDSTAELLEAFQVFDKDG-----------------EKLSDQEVDELIGLADENNTGH 118
+ + DS E+ EAF+VFDKDG EKL+D+EVDE+I AD + G
Sbjct: 1 MKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 60
Query: 119 VRYEEFAKVMT 129
V YEEF ++MT
Sbjct: 61 VNYEEFVQMMT 71
Score = 52.0 bits (123), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 43/63 (68%)
Query: 11 EWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVDFESFLK 70
E +EAF +FDK+G+G I + + VM +G T++E++++++E D D G V++E F++
Sbjct: 9 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 68
Query: 71 LMA 73
+M
Sbjct: 69 MMT 71
>pdb|1WDC|B Chain B, Scallop Myosin Regulatory Domain
pdb|1B7T|Y Chain Y, Myosin Digested By Papain
pdb|1KK7|Y Chain Y, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|B Chain B, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|B Chain B, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|B Chain B, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Y Chain Y, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|Y Chain Y, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|B Chain B, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JTD|B Chain B, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
pdb|3JVT|B Chain B, Calcium-Bound Scallop Myosin Regulatory Domain (Lever Arm)
With Reconstituted Complete Light Chains
Length = 156
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 65/119 (54%), Gaps = 6/119 (5%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSV 63
L ++QI E KEAF++ D + G + + + + +GR P ++EL +LKE G +
Sbjct: 12 LPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKEAP----GPL 67
Query: 64 DFESFLKLMANHIPNVDSTAELLEAFQVFD-KDGEKLSDQEVDELI-GLADENNTGHVR 120
+F FL + ++ + DS + AF +FD ++ +KL+ + + +L+ + D N +R
Sbjct: 68 NFTMFLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMR 126
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 13 KEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVDFESFLKLM 72
+ AFA+FD+ + K+ +Y+ ++ +G N + E+ KE P + G D+ F ++
Sbjct: 90 RNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEA-PVEGGKFDYVKFTAMI 148
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 38/66 (57%), Gaps = 17/66 (25%)
Query: 80 DSTAELLEAFQVFDKD-----------------GEKLSDQEVDELIGLADENNTGHVRYE 122
DS EL EAF+VFDKD GEKL+D+EVDE+I AD + G + YE
Sbjct: 1 DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYE 60
Query: 123 EFAKVM 128
EF KVM
Sbjct: 61 EFVKVM 66
Score = 49.7 bits (117), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 42/62 (67%)
Query: 11 EWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVDFESFLK 70
E KEAF +FDK+ +G I + + VM +G T++E++++++E D D G +++E F+K
Sbjct: 5 ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK 64
Query: 71 LM 72
+M
Sbjct: 65 VM 66
>pdb|1SCM|C Chain C, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 149
Score = 52.4 bits (124), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 72/145 (49%), Gaps = 27/145 (18%)
Query: 6 EEQITEWKEAFALFD--KNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVG-- 61
+++I + K+ F LFD G + + +G V R +G NP ED+ +G
Sbjct: 2 QDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRN---EDVFAVGGTHKMGEK 58
Query: 62 SVDFESFLKLMANHIPNVDST-AELLEAFQVFDKDG-----------------EKLSDQE 103
S+ FE FL + T A+ +EAF+ FD++G E+LSD++
Sbjct: 59 SLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDED 118
Query: 104 VDELIGLAD--ENNTGHVRYEEFAK 126
VDE+I L D E+ G+V+YE+F K
Sbjct: 119 VDEIIKLTDLQEDLEGNVKYEDFVK 143
Score = 35.0 bits (79), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 42/71 (59%), Gaps = 4/71 (5%)
Query: 4 LDEEQIT--EWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVD--PDD 59
+D EQ T ++ EAF FD+ G G I + V+ A+G +++++++++K D D
Sbjct: 73 MDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDL 132
Query: 60 VGSVDFESFLK 70
G+V +E F+K
Sbjct: 133 EGNVKYEDFVK 143
>pdb|2W4T|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 151
Score = 52.4 bits (124), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 72/145 (49%), Gaps = 27/145 (18%)
Query: 6 EEQITEWKEAFALFD--KNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVG-- 61
+++I + K+ F LFD G + + +G V R +G NP ED+ +G
Sbjct: 2 QDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRN---EDVFAVGGTHKMGEK 58
Query: 62 SVDFESFLKLMANHIPNVDST-AELLEAFQVFDKDG-----------------EKLSDQE 103
S+ FE FL + T A+ +EAF+ FD++G E+LSD++
Sbjct: 59 SLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDED 118
Query: 104 VDELIGLAD--ENNTGHVRYEEFAK 126
VDE+I L D E+ G+V+YE+F K
Sbjct: 119 VDEIIKLTDLQEDLEGNVKYEDFVK 143
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Query: 4 LDEEQIT--EWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVD--PDD 59
+D EQ T ++ EAF FD+ G G I + V+ A+G +++++++++K D D
Sbjct: 73 MDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDL 132
Query: 60 VGSVDFESFL-KLMANHIP 77
G+V +E F+ K+MA P
Sbjct: 133 EGNVKYEDFVKKVMAGPYP 151
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 52.4 bits (124), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 41/62 (66%)
Query: 11 EWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVDFESFLK 70
E KEAF +FDK+ +G I + + VM +G T++E+E ++KE D D G V++E F+K
Sbjct: 5 ELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVK 64
Query: 71 LM 72
+M
Sbjct: 65 MM 66
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 38/66 (57%), Gaps = 17/66 (25%)
Query: 80 DSTAELLEAFQVFDKD-----------------GEKLSDQEVDELIGLADENNTGHVRYE 122
D+ EL EAF+VFDKD GEKL+D+EV+++I AD + G V YE
Sbjct: 1 DAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYE 60
Query: 123 EFAKVM 128
EF K+M
Sbjct: 61 EFVKMM 66
>pdb|1SJJ|A Chain A, Cryo-Em Structure Of Chicken Gizzard Smooth Muscle Alpha-
Actinin
pdb|1SJJ|B Chain B, Cryo-Em Structure Of Chicken Gizzard Smooth Muscle Alpha-
Actinin
Length = 863
Score = 52.4 bits (124), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 57/104 (54%), Gaps = 3/104 (2%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSV 63
+ +EQ+ E++ +F FD+ +G + + + ++G N E E ++ VDP+ +G V
Sbjct: 719 ISQEQMNEFRASFNHFDRKKTGMMDCEDFRACLISMGYNMGEAEFARIMSIVDPNRMGVV 778
Query: 64 DFESFLKLMANHIPNVDSTAELLEAFQVFDKDGEKLSDQEVDEL 107
F++F+ M+ + D+ +++ +F++ D ++ VDEL
Sbjct: 779 TFQAFIDFMSRETADTDTADQVMASFKILAGDKNYIT---VDEL 819
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 52.0 bits (123), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 43/62 (69%)
Query: 11 EWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVDFESFLK 70
E +EAF +FDK+G+G I + + VM +G T++E++++++E D D G V++E F++
Sbjct: 6 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 65
Query: 71 LM 72
+M
Sbjct: 66 MM 67
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 39/68 (57%), Gaps = 17/68 (25%)
Query: 79 VDSTAELLEAFQVFDKDG-----------------EKLSDQEVDELIGLADENNTGHVRY 121
DS E+ EAF+VFDKDG EKL+D+EVDE+I AD + G V Y
Sbjct: 1 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 60
Query: 122 EEFAKVMT 129
EEF ++MT
Sbjct: 61 EEFVQMMT 68
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From Calmodulin
To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 52.0 bits (123), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 40/69 (57%), Gaps = 17/69 (24%)
Query: 78 NVDSTAELLEAFQVFDKDG-----------------EKLSDQEVDELIGLADENNTGHVR 120
+ DS E+ EAF+VFDKDG EKL+D+EVDE+I AD + G V
Sbjct: 1 DTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 60
Query: 121 YEEFAKVMT 129
YEEF ++MT
Sbjct: 61 YEEFVQMMT 69
Score = 52.0 bits (123), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 43/63 (68%)
Query: 11 EWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVDFESFLK 70
E +EAF +FDK+G+G I + + VM +G T++E++++++E D D G V++E F++
Sbjct: 7 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 66
Query: 71 LMA 73
+M
Sbjct: 67 MMT 69
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With
Pyrophosphate
Length = 67
Score = 52.0 bits (123), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 43/62 (69%)
Query: 11 EWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVDFESFLK 70
E +EAF +FDK+G+G I + + VM +G T++E++++++E D D G V++E F++
Sbjct: 6 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 65
Query: 71 LM 72
+M
Sbjct: 66 MM 67
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 38/67 (56%), Gaps = 17/67 (25%)
Query: 79 VDSTAELLEAFQVFDKDG-----------------EKLSDQEVDELIGLADENNTGHVRY 121
DS E+ EAF+VFDKDG EKL+D+EVDE+I AD + G V Y
Sbjct: 1 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 60
Query: 122 EEFAKVM 128
EEF ++M
Sbjct: 61 EEFVQMM 67
>pdb|1KK8|B Chain B, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 139
Score = 52.0 bits (123), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 64/117 (54%), Gaps = 6/117 (5%)
Query: 6 EEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVDF 65
++QI E KEAF++ D + G + + + + +GR P ++EL +LKE G ++F
Sbjct: 2 QKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKEA----PGPLNF 57
Query: 66 ESFLKLMANHIPNVDSTAELLEAFQVFD-KDGEKLSDQEVDELI-GLADENNTGHVR 120
FL + ++ + DS + AF +FD ++ +KL+ + + +L+ + D N +R
Sbjct: 58 TMFLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMR 114
Score = 28.5 bits (62), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 13 KEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVDFESFLKLM 72
+ AFA+FD+ + K+ +Y+ ++ +G N + E+ KE P + G D+ F ++
Sbjct: 78 RNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEA-PVEGGKFDYVKFTAMI 136
>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin
C-Domain E104dE140D MUTANT
Length = 72
Score = 52.0 bits (123), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 46/70 (65%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSV 63
+D + E +EAF +FDK+G+G I + + VM +G T++E++++++E D D G V
Sbjct: 1 MDTDSEEEIREAFRVFDKDGNGYISAADLRHVMTNLGEKLTDEEVDEMIREADIDGDGQV 60
Query: 64 DFESFLKLMA 73
++E F+++M
Sbjct: 61 NYEDFVQMMT 70
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 40/69 (57%), Gaps = 17/69 (24%)
Query: 78 NVDSTAELLEAFQVFDKDG-----------------EKLSDQEVDELIGLADENNTGHVR 120
+ DS E+ EAF+VFDKDG EKL+D+EVDE+I AD + G V
Sbjct: 2 DTDSEEEIREAFRVFDKDGNGYISAADLRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 61
Query: 121 YEEFAKVMT 129
YE+F ++MT
Sbjct: 62 YEDFVQMMT 70
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal
Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal
Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In
Calcium-Calmodulin: Solution Structure Of Halothane-Cam
C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe
Bound With Er Alpha Peptide
Length = 67
Score = 52.0 bits (123), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 43/62 (69%)
Query: 11 EWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVDFESFLK 70
E +EAF +FDK+G+G I + + VM +G T++E++++++E D D G V++E F++
Sbjct: 3 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 62
Query: 71 LM 72
+M
Sbjct: 63 MM 64
Score = 48.9 bits (115), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 37/63 (58%), Gaps = 17/63 (26%)
Query: 84 ELLEAFQVFDKDG-----------------EKLSDQEVDELIGLADENNTGHVRYEEFAK 126
E+ EAF+VFDKDG EKL+D+EVDE+I AD + G V YEEF +
Sbjct: 3 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 62
Query: 127 VMT 129
+MT
Sbjct: 63 MMT 65
>pdb|3PN7|B Chain B, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|E Chain E, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|B Chain B, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|E Chain E, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
Length = 161
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 64/119 (53%), Gaps = 6/119 (5%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSV 63
L ++ + E KEAF + D+N G I + + ++GR P ++EL +LKE G +
Sbjct: 17 LPQKLMQEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLKEA----PGPL 72
Query: 64 DFESFLKLMANHIPNVDSTAELLEAFQVFDK-DGEKLSDQEVDELI-GLADENNTGHVR 120
+F FL + ++ + DS + AF +FD+ D +KL+ + + +L+ + D N +R
Sbjct: 73 NFTMFLSIFSDKLSGTDSEETIRNAFGMFDELDTKKLNIEYIKDLLENMGDNFNKDEMR 131
Score = 26.9 bits (58), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 15/60 (25%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 13 KEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVDFESFLKLM 72
+ AF +FD+ + K+ +Y+ ++ +G N + E+ KE P + G D+ F+ ++
Sbjct: 95 RNAFGMFDELDTKKLNIEYIKDLLENMGDNFNKDEMRMTFKEA-PVEGGKFDYVRFVAMI 153
>pdb|3TUY|B Chain B, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
pdb|3TUY|E Chain E, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
Length = 161
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 64/119 (53%), Gaps = 6/119 (5%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSV 63
L ++ + E KEAF + D+N G I + + ++GR P ++EL +LKE G +
Sbjct: 17 LPQKLMQEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLKEA----PGPL 72
Query: 64 DFESFLKLMANHIPNVDSTAELLEAFQVFDK-DGEKLSDQEVDELI-GLADENNTGHVR 120
+F FL + ++ + DS + AF +FD+ D +KL+ + + +L+ + D N +R
Sbjct: 73 NFTMFLSIFSDKLSGTDSEETIRNAFGMFDELDTKKLNIEYIKDLLENMGDNFNKDEMR 131
Score = 26.9 bits (58), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/60 (25%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 13 KEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVDFESFLKLM 72
+ AF +FD+ + K+ +Y+ ++ +G N + E+ KE P + G D+ F+ ++
Sbjct: 95 RNAFGMFDELDTKKLNIEYIKDLLENMGDNFNKDEMRMTFKEA-PVEGGKFDYVRFVAMI 153
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 41/62 (66%)
Query: 11 EWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVDFESFLK 70
E KEAF +FDK+ +G I + + VM +G T++E+E ++KE D D G V++E F+K
Sbjct: 10 ELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVK 69
Query: 71 LM 72
+M
Sbjct: 70 MM 71
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 39/68 (57%), Gaps = 17/68 (25%)
Query: 78 NVDSTAELLEAFQVFDKD-----------------GEKLSDQEVDELIGLADENNTGHVR 120
+ D+ EL EAF+VFDKD GEKL+D+EV+++I AD + G V
Sbjct: 4 DTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVN 63
Query: 121 YEEFAKVM 128
YEEF K+M
Sbjct: 64 YEEFVKMM 71
>pdb|2W4T|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 136
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 63/116 (54%), Gaps = 6/116 (5%)
Query: 7 EQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVDFE 66
+QI E KEAF++ D + G + + + + +GR P ++EL +LKE G ++F
Sbjct: 1 KQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKEAP----GPLNFT 56
Query: 67 SFLKLMANHIPNVDSTAELLEAFQVFD-KDGEKLSDQEVDELI-GLADENNTGHVR 120
FL + ++ + DS + AF +FD ++ +KL+ + + +L+ + D N +R
Sbjct: 57 MFLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMR 112
Score = 28.9 bits (63), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 13 KEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVDFESFLKLM 72
+ AFA+FD+ + K+ +Y+ ++ +G N + E+ KE P + G D+ F ++
Sbjct: 76 RNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEA-PVEGGKFDYVKFTAMI 134
>pdb|3JTD|C Chain C, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
Length = 156
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 72/147 (48%), Gaps = 27/147 (18%)
Query: 4 LDEEQITEWKEAFALFD--KNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVG 61
L +++I + K+ F LF G + + +G V R +G NP ED+ +G
Sbjct: 3 LSQDEIDDLKDVFELFAFWDGRDGAVDAFKLGDVCRCLGINPRN---EDVFAVGGTHKMG 59
Query: 62 --SVDFESFLKLMANHIPNVDST-AELLEAFQVFDKDG-----------------EKLSD 101
S+ FE FL + T A+ +EAF+ FD++G E+LSD
Sbjct: 60 EKSLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSD 119
Query: 102 QEVDELIGLAD--ENNTGHVRYEEFAK 126
++VDE+I L D E+ G+V+YE+F K
Sbjct: 120 EDVDEIIKLTDLQEDLEGNVKYEDFVK 146
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 47/80 (58%), Gaps = 5/80 (6%)
Query: 4 LDEEQIT--EWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVD--PDD 59
+D EQ T ++ EAF FD+ G G I + V+ A+G +++++++++K D D
Sbjct: 76 MDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDL 135
Query: 60 VGSVDFESFL-KLMANHIPN 78
G+V +E F+ K+MA P+
Sbjct: 136 EGNVKYEDFVKKVMAGPYPD 155
>pdb|3KHE|A Chain A, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
pdb|3KHE|B Chain B, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
Length = 191
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 70/148 (47%), Gaps = 27/148 (18%)
Query: 7 EQITEWKEAFALFDKNGSGKI-----------VSKYVGTVMRAIGRNPTEQELEDLLKEV 55
E+ E + F D NG G++ + ++ G + + + E E++ +L+ V
Sbjct: 37 EETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSV 96
Query: 56 DPDDVGSVDFESFLKLMANHIPNVDSTAELLEAFQVFDKDGE-KLSDQEVDELIGL---- 110
D D G +++ F+ + + + S LL AFQ FD DG K++++E+ L G+
Sbjct: 97 DFDRNGYIEYSEFVTVCMDKQLLL-SRERLLAAFQQFDSDGSGKITNEELGRLFGVTEVD 155
Query: 111 ----------ADENNTGHVRYEEFAKVM 128
D+NN G V +EEF ++M
Sbjct: 156 DETWHQVLQECDKNNDGEVDFEEFVEMM 183
>pdb|2EC6|B Chain B, Placopecten Striated Muscle Myosin Ii
Length = 133
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 60/114 (52%), Gaps = 6/114 (5%)
Query: 9 ITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVDFESF 68
+ E KEAF + D+N G I + ++GR P ++EL +LKE G ++F F
Sbjct: 1 MQEMKEAFTMIDQNRDGFIDINDLKEEFSSLGRTPDDKELTAMLKEA----PGPLNFTMF 56
Query: 69 LKLMANHIPNVDSTAELLEAFQVFDKDG-EKLSDQEVDELI-GLADENNTGHVR 120
L + ++ + DS + AF +FD+D +KL+ + + +L+ + D N +R
Sbjct: 57 LSIFSDKLSGTDSEETIRNAFGMFDEDATKKLNIEYIKDLLENMGDNFNKDEMR 110
Score = 29.6 bits (65), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 15/60 (25%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 13 KEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVDFESFLKLM 72
+ AF +FD++ + K+ +Y+ ++ +G N + E+ KE P + G D+ F+ ++
Sbjct: 74 RNAFGMFDEDATKKLNIEYIKDLLENMGDNFNKDEMRMTFKEA-PVEGGKFDYVRFVAMI 132
>pdb|2GV5|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|D Chain D, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|E Chain E, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|C Chain C, Crystal Structure Of Sfi1pCDC31P COMPLEX
Length = 161
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 61/141 (43%), Gaps = 17/141 (12%)
Query: 6 EEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVDF 65
EEQ E EAF+LFD N G + + +A+G ++E+ DL+ E D + +
Sbjct: 19 EEQKQEIYEAFSLFDXNNDGFLDYHELKVAXKALGFELPKREILDLIDEYDSEGRHLXKY 78
Query: 66 ESFLKLMANHIPNVDSTAELLEAFQVFDKD-----------------GEKLSDQEVDELI 108
+ F + I D E+ AFQ+FD D GE L+D+E+ I
Sbjct: 79 DDFYIVXGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAXI 138
Query: 109 GLADENNTGHVRYEEFAKVMT 129
D + G + EF + T
Sbjct: 139 EEFDLDGDGEINENEFIAICT 159
Score = 38.9 bits (89), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSV 63
L + + E K AF LFD + +GKI K + V + +G T++EL ++E D D G +
Sbjct: 90 LKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAXIEEFDLDGDGEI 149
Query: 64 DFESFLKLMAN 74
+ F+ + +
Sbjct: 150 NENEFIAICTD 160
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 70/148 (47%), Gaps = 27/148 (18%)
Query: 7 EQITEWKEAFALFDKNGSGKI-----------VSKYVGTVMRAIGRNPTEQELEDLLKEV 55
E+ E + F D NG G++ + ++ G + + + E E++ +L+ V
Sbjct: 311 EETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSV 370
Query: 56 DPDDVGSVDFESFLKLMANHIPNVDSTAELLEAFQVFDKDGE-KLSDQEVDELIGL---- 110
D D G +++ F+ + + + S LL AFQ FD DG K++++E+ L G+
Sbjct: 371 DFDRNGYIEYSEFVTVCMDK-QLLLSRERLLAAFQQFDSDGSGKITNEELGRLFGVTEVD 429
Query: 111 ----------ADENNTGHVRYEEFAKVM 128
D+NN G V +EEF ++M
Sbjct: 430 DETWHQVLQECDKNNDGEVDFEEFVEMM 457
>pdb|2W4A|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 150
Score = 49.7 bits (117), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 64/144 (44%), Gaps = 22/144 (15%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGR-NPTEQELEDLLKEVDPDDVGS 62
D+ QI ++KEAF + D+N G I + A+GR N +EL+ ++KE G
Sbjct: 6 FDQTQIQDFKEAFTVIDQNRDGIIDKDDLRETFAAMGRLNVKNEELDAMIKEAS----GP 61
Query: 63 VDFESFLKLMANHIPNVDSTAELLEAFQVFDKDG-----------------EKLSDQEVD 105
++F FL + + D ++ AF+V D DG ++ + +E+
Sbjct: 62 INFTVFLTMFGEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTQCDRFTPEEIK 121
Query: 106 ELIGLADENNTGHVRYEEFAKVMT 129
+ + G+V Y+ V+T
Sbjct: 122 NMWAAFPPDVAGNVDYKNICYVIT 145
>pdb|1M8Q|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|T Chain T, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 145
Score = 49.3 bits (116), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 64/144 (44%), Gaps = 22/144 (15%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGR-NPTEQELEDLLKEVDPDDVGS 62
DE +I ++KEAF + D+N G I + A+GR N +EL+ ++KE G
Sbjct: 1 FDETEIEDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMIKEAS----GP 56
Query: 63 VDFESFLKLMANHIPNVDSTAELLEAFQVFDKDGE-----------------KLSDQEVD 105
++F FL + + D ++ AF+V D DG+ + + +E+
Sbjct: 57 INFTVFLTMFGEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIK 116
Query: 106 ELIGLADENNTGHVRYEEFAKVMT 129
+ + G+V Y+ V+T
Sbjct: 117 NMWAAFPPDVAGNVDYKNICYVIT 140
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 48.9 bits (115), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 44/82 (53%), Gaps = 24/82 (29%)
Query: 65 FESFLKLMANHIPNVDSTAELLEAFQVFDKDG-----------------EKLSDQEVDEL 107
F+S +K + DS E+ EAF+V DKDG EKL+D+EVDE+
Sbjct: 18 FQSLMK-------DTDSEEEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 70
Query: 108 IGLADENNTGHVRYEEFAKVMT 129
I AD + G V YEEF ++MT
Sbjct: 71 IREADIDGDGQVNYEEFVQMMT 92
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 42/63 (66%)
Query: 11 EWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVDFESFLK 70
E +EAF + DK+G+G I + + VM +G T++E++++++E D D G V++E F++
Sbjct: 30 EIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 89
Query: 71 LMA 73
+M
Sbjct: 90 MMT 92
>pdb|2MYS|B Chain B, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
pdb|1I84|U Chain U, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|Z Chain Z, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment
Length = 166
Score = 48.9 bits (115), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 64/144 (44%), Gaps = 22/144 (15%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGR-NPTEQELEDLLKEVDPDDVGS 62
DE +I ++KEAF + D+N G I + A+GR N +EL+ ++KE G
Sbjct: 19 FDETEIEDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMIKEAS----GP 74
Query: 63 VDFESFLKLMANHIPNVDSTAELLEAFQVFDKDGE-----------------KLSDQEVD 105
++F FL + + D ++ AF+V D DG+ + + +E+
Sbjct: 75 INFTVFLTMFGEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIK 134
Query: 106 ELIGLADENNTGHVRYEEFAKVMT 129
+ + G+V Y+ V+T
Sbjct: 135 NMWAAFPPDVAGNVDYKNICYVIT 158
>pdb|2K2A|A Chain A, Solution Structure Of The Apo C Terminal Domain Of
Lethoceru C Isoform F1
Length = 70
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 39/64 (60%)
Query: 11 EWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVDFESFLK 70
E +EAF L+DK G+G I + + ++ + + ++L+ ++ E+D D G+VDFE F+
Sbjct: 4 ELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEFMG 63
Query: 71 LMAN 74
+M
Sbjct: 64 VMTG 67
Score = 34.7 bits (78), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 17/63 (26%)
Query: 84 ELLEAFQVFDKDG-----------------EKLSDQEVDELIGLADENNTGHVRYEEFAK 126
EL EAF+++DK+G E LS +++D +I D + +G V +EEF
Sbjct: 4 ELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEFMG 63
Query: 127 VMT 129
VMT
Sbjct: 64 VMT 66
>pdb|2K7C|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 C-Domain
pdb|2K7D|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain
Length = 72
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Query: 9 ITEWKEAFALFDKNGSGKIVSKYVGTVMRAI-GRNPTEQELEDLLKEVDPDDVGSVDFES 67
+ E ++AF FD NG G+I + + MR + G +++E+++++VD + G VDFE
Sbjct: 6 VKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEE 65
Query: 68 FLKLMAN 74
F+++M+
Sbjct: 66 FVRMMSR 72
Score = 31.2 bits (69), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 19/84 (22%)
Query: 46 QELEDLLKEVDPDDVGSVDFESFLKLMANHIPNVDSTAELLEAFQVFDKDGEKLSDQEVD 105
+EL D +E D + G + ST+EL EA + G ++ ++++
Sbjct: 7 KELRDAFREFDTNGDGEI-----------------STSELREAMRKLL--GHQVGHRDIE 47
Query: 106 ELIGLADENNTGHVRYEEFAKVMT 129
E+I D N G V +EEF ++M+
Sbjct: 48 EIIRDVDLNGDGRVDFEEFVRMMS 71
>pdb|3TZ1|A Chain A, Crystal Structure Of The Ca2+-saturated C-terminal
Domain Of Akazara Scallop Troponin C In Complex With A
Troponin I Fragment
Length = 74
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSV 63
LDE ++ KEAF + DK G I + +++++G TE E+E+++ E D D G+V
Sbjct: 4 LDEREL---KEAFRVLDKEKKGVIKVDVLRWILKSLGDELTEDEIENMIAETDTDGSGTV 60
Query: 64 DFESFLKLMANH 75
D+E F LM +
Sbjct: 61 DYEEFKCLMMSS 72
>pdb|1OQP|A Chain A, Structure Of The Ca2+C-Terminal Domain Of Caltractin In
Complex With The Cdc31p-Binding Domain From Kar1p
Length = 77
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 37/58 (63%)
Query: 15 AFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVDFESFLKLM 72
AF LFD + SG I K + V + +G N TE+EL++++ E D +D +D + F+++M
Sbjct: 14 AFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRIM 71
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 17/66 (25%)
Query: 80 DSTAELLEAFQVFDKD-----------------GEKLSDQEVDELIGLADENNTGHVRYE 122
DS E+L+AF++FD D GE L+++E+ E+I AD N+ + +
Sbjct: 6 DSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDED 65
Query: 123 EFAKVM 128
EF ++M
Sbjct: 66 EFIRIM 71
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%)
Query: 14 EAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVDFESFLKLMA 73
AF +FDK+GSGKI +K + + + +ELE ++++VD + G VDF F++++
Sbjct: 421 RAFKMFDKDGSGKISTKELFKLFSQADSSIQMEELESIIEQVDNNKDGEVDFNEFVEMLQ 480
Query: 74 NHIPN 78
N + N
Sbjct: 481 NFVRN 485
Score = 32.0 bits (71), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 48/101 (47%), Gaps = 18/101 (17%)
Query: 45 EQELEDLLKEVDPDDVGSVDFESFLKLMANHIPNVDSTAELLEAFQVFDKDGE-KLSDQE 103
E +++ L+ +D D GS+++ F+ + + S + AF++FDKDG K+S +E
Sbjct: 380 EDQIDSLMPLLDMDGSGSIEYSEFIASAIDRTILL-SRERMERAFKMFDKDGSGKISTKE 438
Query: 104 VDELIGLADE----------------NNTGHVRYEEFAKVM 128
+ +L AD N G V + EF +++
Sbjct: 439 LFKLFSQADSSIQMEELESIIEQVDNNKDGEVDFNEFVEML 479
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 69/151 (45%), Gaps = 25/151 (16%)
Query: 1 KLTLDEEQITEWKEAFALFDKNGSGKI--------VSKYVGTVMRAIGRNPTEQELEDLL 52
KLT +E+ E + F DKNG G++ SK G + E E++ +L
Sbjct: 55 KLT-SQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAIL 113
Query: 53 KEVDPDDVGSVDFESFLKLMANHIPNVDSTAELLEAFQVFDKDGE-KLSDQEVDELIGL- 110
D D G +D+ F+ + + ++ S +L AFQ FD+DG K+S E+ + GL
Sbjct: 114 GAADFDRNGYIDYSEFVTVAMDR-KSLLSKDKLESAFQKFDQDGNGKISVDELASVFGLD 172
Query: 111 -------------ADENNTGHVRYEEFAKVM 128
D NN G V +EEF K++
Sbjct: 173 HLESKTWKEMISGIDSNNDGDVDFEEFCKMI 203
Score = 30.8 bits (68), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 25/87 (28%)
Query: 66 ESFLKLMANHIPNVDSTAELLEAFQVFDKDGE-------------KLS------------ 100
++ L MA+ + + + T EL + F+ DK+G+ KLS
Sbjct: 46 QAALLYMASKLTSQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQI 105
Query: 101 DQEVDELIGLADENNTGHVRYEEFAKV 127
+ EVD ++G AD + G++ Y EF V
Sbjct: 106 ESEVDAILGAADFDRNGYIDYSEFVTV 132
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 46.6 bits (109), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 69/151 (45%), Gaps = 25/151 (16%)
Query: 1 KLTLDEEQITEWKEAFALFDKNGSGKI--------VSKYVGTVMRAIGRNPTEQELEDLL 52
KLT +E+ E + F DKNG G++ SK G + E E++ +L
Sbjct: 338 KLT-SQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAIL 396
Query: 53 KEVDPDDVGSVDFESFLKLMANHIPNVDSTAELLEAFQVFDKDGE-KLSDQEVDELIGL- 110
D D G +D+ F+ + + ++ S +L AFQ FD+DG K+S E+ + GL
Sbjct: 397 GAADFDRNGYIDYSEFVTVAMDR-KSLLSKDKLESAFQKFDQDGNGKISVDELASVFGLD 455
Query: 111 -------------ADENNTGHVRYEEFAKVM 128
D NN G V +EEF K++
Sbjct: 456 HLESKTWKEMISGIDSNNDGDVDFEEFCKMI 486
Score = 31.2 bits (69), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 25/87 (28%)
Query: 66 ESFLKLMANHIPNVDSTAELLEAFQVFDKDGE-------------KLS------------ 100
++ L MA+ + + + T EL + F+ DK+G+ KLS
Sbjct: 329 QAALLYMASKLTSQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQI 388
Query: 101 DQEVDELIGLADENNTGHVRYEEFAKV 127
+ EVD ++G AD + G++ Y EF V
Sbjct: 389 ESEVDAILGAADFDRNGYIDYSEFVTV 415
>pdb|2A4J|A Chain A, Solution Structure Of The C-Terminal Domain (T94-Y172)
Of The Human Centrin 2 In Complex With A 17 Residues
Peptide (P1-Xpc) From Xeroderma Pigmentosum Group C
Protein
pdb|2K2I|A Chain A, Nmr Solution Structure Of The C-Terminal Domain
(T94-Y172) Of The Human Centrin 2 In Complex With A
Repeat Sequence Of Human Sfi1 (R641-T660)
Length = 79
Score = 46.6 bits (109), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 37/58 (63%)
Query: 15 AFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVDFESFLKLM 72
AF LFD + +GKI K + V + +G N T++EL++++ E D D G V + FL++M
Sbjct: 16 AFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIM 73
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 17/73 (23%)
Query: 73 ANHIPNVDSTAELLEAFQVFDKD-----------------GEKLSDQEVDELIGLADENN 115
+ D+ E+L+AF++FD D GE L+D+E+ E+I AD +
Sbjct: 1 TQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDG 60
Query: 116 TGHVRYEEFAKVM 128
G V +EF ++M
Sbjct: 61 DGEVSEQEFLRIM 73
>pdb|1M39|A Chain A, Solution Structure Of The C-Terminal Fragment (F86-I165)
Of The Human Centrin 2 In Calcium Saturated Form
Length = 89
Score = 45.8 bits (107), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 37/58 (63%)
Query: 15 AFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVDFESFLKLM 72
AF LFD + +GKI K + V + +G N T++EL++++ E D D G V + FL++M
Sbjct: 26 AFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIM 83
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 17/83 (20%)
Query: 63 VDFESFLKLMANHIPNVDSTAELLEAFQVFDKD-----------------GEKLSDQEVD 105
++F FL +M + D+ E+L+AF++FD D GE L+D+E+
Sbjct: 1 MNFGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQ 60
Query: 106 ELIGLADENNTGHVRYEEFAKVM 128
E+I AD + G V +EF ++M
Sbjct: 61 EMIDEADRDGDGEVSEQEFLRIM 83
>pdb|1IH0|A Chain A, Structure Of The C-Domain Of Human Cardiac Troponin C In
Complex With Ca2+ Sensitizer Emd 57033
Length = 71
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 39/62 (62%)
Query: 11 EWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVDFESFLK 70
E + F +FDKN G I + + +++A G TE ++E+L+K+ D ++ G +D++ FL+
Sbjct: 6 ELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLE 65
Query: 71 LM 72
M
Sbjct: 66 FM 67
Score = 34.3 bits (77), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 20/86 (23%)
Query: 43 PTEQELEDLLKEVDPDDVGSVDFESFLKLMANHIPNVDSTAELLEAFQVFDKDGEKLSDQ 102
+E+EL DL + D + G +D E LK+M GE +++
Sbjct: 2 KSEEELSDLFRMFDKNADGYIDLEE-LKIMLQAT-------------------GETITED 41
Query: 103 EVDELIGLADENNTGHVRYEEFAKVM 128
+++EL+ D+NN G + Y+EF + M
Sbjct: 42 DIEELMKDGDKNNDGRIDYDEFLEFM 67
>pdb|3CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr,
30 Structures
Length = 76
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 39/62 (62%)
Query: 11 EWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVDFESFLK 70
E + F +FDKN G I + + +++A G TE ++E+L+K+ D ++ G +D++ FL+
Sbjct: 11 ELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLE 70
Query: 71 LM 72
M
Sbjct: 71 FM 72
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 20/88 (22%)
Query: 41 RNPTEQELEDLLKEVDPDDVGSVDFESFLKLMANHIPNVDSTAELLEAFQVFDKDGEKLS 100
+ TE+EL DL + D + G +D E LK+M GE ++
Sbjct: 5 KGKTEEELSDLFRMFDKNADGYIDLEE-LKIMLQAT-------------------GETIT 44
Query: 101 DQEVDELIGLADENNTGHVRYEEFAKVM 128
+ +++EL+ D+NN G + Y+EF + M
Sbjct: 45 EDDIEELMKDGDKNNDGRIDYDEFLEFM 72
>pdb|1FI5|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac
Troponin C Bound To The N Terminal Domain Of Cardiac
Troponin I.
pdb|1SBJ|A Chain A, Nmr Structure Of The Mg2+-Loaded C Terminal Domain Of
Cardiac Troponin C Bound To The N Terminal Domain Of
Cardiac Troponin I
pdb|1SCV|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac
Troponin C Bound To The N Terminal Domain Of Cardiac
Troponin I
Length = 81
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 39/62 (62%)
Query: 11 EWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVDFESFLK 70
E + F +FDKN G I + + +++A G TE ++E+L+K+ D ++ G +D++ FL+
Sbjct: 16 ELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLE 75
Query: 71 LM 72
M
Sbjct: 76 FM 77
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 20/94 (21%)
Query: 35 VMRAIGRNPTEQELEDLLKEVDPDDVGSVDFESFLKLMANHIPNVDSTAELLEAFQVFDK 94
M+ + TE+EL DL + D + G +D E LK+M
Sbjct: 4 CMKDDSKGKTEEELSDLFRMFDKNADGYIDLEE-LKIMLQAT------------------ 44
Query: 95 DGEKLSDQEVDELIGLADENNTGHVRYEEFAKVM 128
GE +++ +++EL+ D+NN G + Y+EF + M
Sbjct: 45 -GETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 77
>pdb|1OZS|A Chain A, C-Domain Of Human Cardiac Troponin C In Complex With The
Inhibitory Region Of Human Cardiac Troponin I
Length = 73
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 39/62 (62%)
Query: 11 EWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVDFESFLK 70
E + F +FDKN G I + + +++A G TE ++E+L+K+ D ++ G +D++ FL+
Sbjct: 8 ELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLE 67
Query: 71 LM 72
M
Sbjct: 68 FM 69
Score = 35.0 bits (79), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 20/88 (22%)
Query: 41 RNPTEQELEDLLKEVDPDDVGSVDFESFLKLMANHIPNVDSTAELLEAFQVFDKDGEKLS 100
+ +E+EL DL + D + G +D E LK+M GE ++
Sbjct: 2 KGKSEEELSDLFRMFDKNADGYIDLEE-LKIMLQAT-------------------GETIT 41
Query: 101 DQEVDELIGLADENNTGHVRYEEFAKVM 128
+ +++EL+ D+NN G + Y+EF + M
Sbjct: 42 EDDIEELMKDGDKNNDGRIDYDEFLEFM 69
>pdb|2FCD|A Chain A, Solution Structure Of N-Lobe Myosin Light Chain From
Saccharomices Cerevisiae
Length = 78
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 13 KEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLL 52
K+ F LFDK G G I +G +RAIG NPT Q ++D++
Sbjct: 7 KDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDII 46
>pdb|2KDH|A Chain A, The Solution Structure Of Human Cardiac Troponin C In
Complex With The Green Tea Polyphenol; (-)-
Epigallocatechin-3-Gallate
pdb|2L98|A Chain A, Structure Of Trans-Resveratrol In Complex With The
Cardiac Regulatory Protein Troponin C
Length = 72
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 38/62 (61%)
Query: 11 EWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVDFESFLK 70
E + F +FDKN G I + +++A G TE ++E+L+K+ D ++ G +D++ FL+
Sbjct: 7 ELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLE 66
Query: 71 LM 72
M
Sbjct: 67 FM 68
Score = 32.7 bits (73), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 20/86 (23%)
Query: 43 PTEQELEDLLKEVDPDDVGSVDFESFLKLMANHIPNVDSTAELLEAFQVFDKDGEKLSDQ 102
+E+EL DL + D + G +D + LK+M GE +++
Sbjct: 3 KSEEELSDLFRMFDKNADGYIDLDE-LKIMLQAT-------------------GETITED 42
Query: 103 EVDELIGLADENNTGHVRYEEFAKVM 128
+++EL+ D+NN G + Y+EF + M
Sbjct: 43 DIEELMKDGDKNNDGRIDYDEFLEFM 68
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 43.5 bits (101), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 72/152 (47%), Gaps = 27/152 (17%)
Query: 1 KLTLDEEQITEWKEAFALFDKNGSGKIVSKYV---GTVMRAIGR-----NPTEQELEDLL 52
KLT EE+ E + F DKNG G++ K + V+R E+E++++L
Sbjct: 347 KLTTLEER-KELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNIL 405
Query: 53 KEVDPDDVGSVDFESFLKL-MANHIPNVDSTAELLEAFQVFDKDGE-KLSDQEVDELIGL 110
KEVD D G +++ F+ + M I + S L AF +FD D K++ +E+ L GL
Sbjct: 406 KEVDFDKNGYIEYSEFISVCMDKQI--LFSEERLRRAFNLFDTDKSGKITKEELANLFGL 463
Query: 111 --------------ADENNTGHVRYEEFAKVM 128
AD+N + ++EF +M
Sbjct: 464 TSISEKTWNDVLGEADQNKDNMIDFDEFVSMM 495
>pdb|2B1U|A Chain A, Solution Structure Of Calmodulin-Like Skin Protein C
Terminal Domain
Length = 71
Score = 42.7 bits (99), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 35/60 (58%)
Query: 15 AFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVDFESFLKLMAN 74
AF FD++G G I + M +G+ ++EL+ +++E D D G V++E F +++A
Sbjct: 11 AFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEFARMLAQ 70
Score = 32.7 bits (73), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 17/59 (28%)
Query: 88 AFQVFDKDG-----------------EKLSDQEVDELIGLADENNTGHVRYEEFAKVMT 129
AF+ FD+DG + L +E+D +I AD + G V YEEFA+++
Sbjct: 11 AFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEFARMLA 69
>pdb|1C7V|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
pdb|1C7W|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
Length = 81
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Query: 5 DEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNP-TEQELEDLLKEVDPDDVGSV 63
DEE+I AF +FD NG G I +M+ +G P T+ E+E+ +KE D D G +
Sbjct: 6 DEEEILR---AFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVI 62
Query: 64 DFESFLKLM 72
D F+ L+
Sbjct: 63 DIPEFMDLI 71
Score = 29.3 bits (64), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 18/63 (28%)
Query: 80 DSTAELLEAFQVFDKDG------------------EKLSDQEVDELIGLADENNTGHVRY 121
D E+L AF+VFD +G E L+D EV+E + ADE+ G +
Sbjct: 5 DDEEEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDI 64
Query: 122 EEF 124
EF
Sbjct: 65 PEF 67
>pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium
Regulatory Domain (Cld) From Soybean Calcium-Dependent
Protein Kinase- Alpha (Cdpk)
Length = 87
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSV 63
L EE+I KE F + D + SG I + ++ +G E E++DL+ D D G++
Sbjct: 17 LSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTI 76
Query: 64 DFESFL 69
D+ F+
Sbjct: 77 DYGEFI 82
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 71/148 (47%), Gaps = 32/148 (21%)
Query: 11 EWKEAFALF---DKNGSGKI-----VSKYVGTVMRAIGRNPT-------EQELEDLLKEV 55
E KE A+F DKNG G++ + Y +MR G++ + E E++ +L V
Sbjct: 333 ETKELTAIFHKMDKNGDGQLDRAELIEGY-KELMRMKGQDASMLDASAVEHEVDQVLDAV 391
Query: 56 DPDDVGSVDFESFLKLMANHIPNVDSTAELLEAFQVFDKDGE-KLSDQEVDELIGLAD-- 112
D D G +++ F+ + + + S L AF++FD D K+S E+ + G++D
Sbjct: 392 DFDKNGYIEYSEFVTVAMDR-KTLLSRERLERAFRMFDSDNSGKISSTELATIFGVSDVD 450
Query: 113 ------------ENNTGHVRYEEFAKVM 128
+NN G V ++EF +++
Sbjct: 451 SETWKSVLSEVDKNNDGEVDFDEFQQML 478
Score = 35.4 bits (80), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 8/66 (12%)
Query: 14 EAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQE-LEDLLKEVDPDDVGSVDFESF---- 68
AF +FD + SGKI S + T+ G + + E + +L EVD ++ G VDF+ F
Sbjct: 422 RAFRMFDSDNSGKISSTELATI---FGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQML 478
Query: 69 LKLMAN 74
LKL N
Sbjct: 479 LKLCGN 484
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 40.0 bits (92), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 71/148 (47%), Gaps = 32/148 (21%)
Query: 11 EWKEAFALF---DKNGSGKI-----VSKYVGTVMRAIGRNPT-------EQELEDLLKEV 55
E KE A+F DKNG G++ + Y +MR G++ + E E++ +L V
Sbjct: 356 ETKELTAIFHKMDKNGDGQLDRAELIEGY-KELMRMKGQDASMLDASAVEHEVDQVLDAV 414
Query: 56 DPDDVGSVDFESFLKLMANHIPNVDSTAELLEAFQVFDKDGE-KLSDQEVDELIGLAD-- 112
D D G +++ F+ + + + S L AF++FD D K+S E+ + G++D
Sbjct: 415 DFDKNGYIEYSEFVTVAMDR-KTLLSRERLERAFRMFDSDNSGKISSTELATIFGVSDVD 473
Query: 113 ------------ENNTGHVRYEEFAKVM 128
+NN G V ++EF +++
Sbjct: 474 SETWKSVLSEVDKNNDGEVDFDEFQQML 501
Score = 35.4 bits (80), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 8/66 (12%)
Query: 14 EAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQE-LEDLLKEVDPDDVGSVDFESF---- 68
AF +FD + SGKI S + T+ G + + E + +L EVD ++ G VDF+ F
Sbjct: 445 RAFRMFDSDNSGKISSTELATI---FGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQML 501
Query: 69 LKLMAN 74
LKL N
Sbjct: 502 LKLCGN 507
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 40.0 bits (92), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 71/148 (47%), Gaps = 32/148 (21%)
Query: 11 EWKEAFALF---DKNGSGKI-----VSKYVGTVMRAIGRNPT-------EQELEDLLKEV 55
E KE A+F DKNG G++ + Y +MR G++ + E E++ +L V
Sbjct: 357 ETKELTAIFHKMDKNGDGQLDRAELIEGY-KELMRMKGQDASMLDASAVEHEVDQVLDAV 415
Query: 56 DPDDVGSVDFESFLKLMANHIPNVDSTAELLEAFQVFDKDGE-KLSDQEVDELIGLAD-- 112
D D G +++ F+ + + + S L AF++FD D K+S E+ + G++D
Sbjct: 416 DFDKNGYIEYSEFVTVAMDR-KTLLSRERLERAFRMFDSDNSGKISSTELATIFGVSDVD 474
Query: 113 ------------ENNTGHVRYEEFAKVM 128
+NN G V ++EF +++
Sbjct: 475 SETWKSVLSEVDKNNDGEVDFDEFQQML 502
Score = 35.4 bits (80), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 8/66 (12%)
Query: 14 EAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQE-LEDLLKEVDPDDVGSVDFESF---- 68
AF +FD + SGKI S + T+ G + + E + +L EVD ++ G VDF+ F
Sbjct: 446 RAFRMFDSDNSGKISSTELATI---FGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQML 502
Query: 69 LKLMAN 74
LKL N
Sbjct: 503 LKLCGN 508
>pdb|3I5G|C Chain C, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|C Chain C, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|C Chain C, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|C Chain C, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 159
Score = 39.7 bits (91), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 68/148 (45%), Gaps = 28/148 (18%)
Query: 4 LDEEQITEWKEAFALFD--KNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVG 61
L +++I E +E F LFD G + + VG ++R +G NPTE ++ + +G
Sbjct: 3 LTKDEIEEVREVFDLFDFWDGRDGDVDAAKVGDLLRCLGMNPTEAQVH---QHGGTKKMG 59
Query: 62 --SVDFESFLKLMANHIPNVDSTA--ELLEAFQVFDKD-----------------GEKLS 100
+ E L + TA E +EAF+ FD++ GE+++
Sbjct: 60 EKAYKLEEILPIYEEMSSKDTGTAADEFMEAFKTFDREGQGLISSAEIRNVLKMLGERIT 119
Query: 101 DQEVDELIGLAD--ENNTGHVRYEEFAK 126
+ + +++ D E+ G+++YE+ K
Sbjct: 120 EDQCNDIFTFCDIREDIDGNIKYEDLMK 147
Score = 38.9 bits (89), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 11 EWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVD-PDDV-GSVDFESF 68
E+ EAF FD+ G G I S + V++ +G TE + D+ D +D+ G++ +E
Sbjct: 86 EFMEAFKTFDREGQGLISSAEIRNVLKMLGERITEDQCNDIFTFCDIREDIDGNIKYEDL 145
Query: 69 L-KLMANHIPN 78
+ K+MA P+
Sbjct: 146 MKKVMAGPFPD 156
>pdb|2OPO|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|C Chain C, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|D Chain D, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
Length = 86
Score = 38.9 bits (89), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 7 EQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVDFE 66
+ I + + F FD NG GKI S +G ++ +G + T E+ ++ E+D D G + F+
Sbjct: 8 QDIADRERIFKRFDTNGDGKISSSELGDALKTLG-SVTPDEVRRMMAEIDTDGDGFISFD 66
Query: 67 SF 68
F
Sbjct: 67 EF 68
>pdb|1JF0|A Chain A, The Crystal Structure Of Obelin From Obelia Geniculata At
1.82 A Resolution
Length = 195
Score = 38.9 bits (89), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Query: 9 ITEWKEA-FALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVDFES 67
I EW +A F +FDK+GSG I R G +P+E++ E + D D+ G +D +
Sbjct: 111 IREWGDAVFDIFDKDGSGTITLDEWKAYGRISGISPSEEDCEKTFQHCDLDNSGELDVDE 170
Query: 68 FLKLMANHIPNVDSTAELL 86
+ +D A+ L
Sbjct: 171 MTRQHLGFWYTLDPEADGL 189
>pdb|2FCE|A Chain A, Solution Structure Of C-Lobe Myosin Light Chain From
Saccharomices Cerevisiae
Length = 70
Score = 38.9 bits (89), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 37/59 (62%)
Query: 11 EWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVDFESFL 69
++ +AF +FDK +GK+ + ++ +G T+ E+++LLK V+ D G +D++ F+
Sbjct: 6 DFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFI 64
Score = 35.4 bits (80), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 17/60 (28%)
Query: 82 TAELLEAFQVFDKD-----------------GEKLSDQEVDELIGLADENNTGHVRYEEF 124
T + ++AFQVFDK+ GEKL+D EVDEL+ + ++ G + Y++F
Sbjct: 4 TEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKF 63
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 67/148 (45%), Gaps = 28/148 (18%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKI-VSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGS 62
+D ++I + F D + SG + V +++ + + +NP Q + D+ D D G
Sbjct: 1 MDADEIKRLGKRFKKLDLDNSGSLSVEEFMS--LPELQQNPLVQRVIDIF---DTDGNGE 55
Query: 63 VDFESFLKLMANHIPNVDSTAELLEAFQVFDKD------------------GEKLSD--- 101
VDF+ F++ ++ D +L AF+++D D G L D
Sbjct: 56 VDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQL 115
Query: 102 -QEVDELIGLADENNTGHVRYEEFAKVM 128
Q VD+ I AD++ G + +EEF V+
Sbjct: 116 QQIVDKTIINADKDGDGRISFEEFCAVV 143
>pdb|1SL7|A Chain A, Crystal Structure Of Calcium-Loaded Apo-Obelin From Obelia
Longissima
Length = 195
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Query: 9 ITEWKEA-FALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVDFES 67
I EW +A F +FDK+GSG I + G +P++++ E + D DD G +D +
Sbjct: 111 IREWGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDDSGDLDVDE 170
Query: 68 FLKLMANHIPNVDSTAELL 86
+ +D A+ L
Sbjct: 171 MTRQHLGFWYTLDPEADGL 189
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 66/148 (44%), Gaps = 28/148 (18%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKI-VSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGS 62
D ++I + F D + SG + V +++ + + +NP Q + D+ D D G
Sbjct: 15 FDADEIKRLGKRFKKLDLDNSGSLSVEEFMS--LPELQQNPLVQRVIDIF---DTDGNGE 69
Query: 63 VDFESFLKLMANHIPNVDSTAELLEAFQVFDKD------------------GEKLSD--- 101
VDF+ F++ ++ D +L AF+++D D G L D
Sbjct: 70 VDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQL 129
Query: 102 -QEVDELIGLADENNTGHVRYEEFAKVM 128
Q VD+ I AD++ G + +EEF V+
Sbjct: 130 QQIVDKTIINADKDGDGRISFEEFCAVV 157
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 66/148 (44%), Gaps = 28/148 (18%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKI-VSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGS 62
D ++I + F D + SG + V +++ + + +NP Q + D+ D D G
Sbjct: 14 FDADEIKRLGKRFKKLDLDNSGSLSVEEFMS--LPELQQNPLVQRVIDIF---DTDGNGE 68
Query: 63 VDFESFLKLMANHIPNVDSTAELLEAFQVFDKD------------------GEKLSD--- 101
VDF+ F++ ++ D +L AF+++D D G L D
Sbjct: 69 VDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQL 128
Query: 102 -QEVDELIGLADENNTGHVRYEEFAKVM 128
Q VD+ I AD++ G + +EEF V+
Sbjct: 129 QQIVDKTIINADKDGDGRISFEEFCAVV 156
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 65/147 (44%), Gaps = 30/147 (20%)
Query: 11 EWKEAFALF---DKNGSGKI-----------VSKYVGTVMRAIGRNPTEQELEDLLKEVD 56
E KE A+F DKNG G++ + + G + + E E++ +L VD
Sbjct: 333 ETKELTAIFHKXDKNGDGQLDRAELIEGYKELXRXKGQDASXLDASAVEHEVDQVLDAVD 392
Query: 57 PDDVGSVDFESFLKLMANHIPNVDSTAELLEAFQVFDKDGE-KLSDQEVDELIGLAD--- 112
D G +++ F+ + + + S L AF+ FD D K+S E+ + G++D
Sbjct: 393 FDKNGYIEYSEFVTVAXDR-KTLLSRERLERAFRXFDSDNSGKISSTELATIFGVSDVDS 451
Query: 113 -----------ENNTGHVRYEEFAKVM 128
+NN G V ++EF + +
Sbjct: 452 ETWKSVLSEVDKNNDGEVDFDEFQQXL 478
Score = 34.3 bits (77), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 8/66 (12%)
Query: 14 EAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQE-LEDLLKEVDPDDVGSVDFESF---- 68
AF FD + SGKI S + T+ G + + E + +L EVD ++ G VDF+ F
Sbjct: 422 RAFRXFDSDNSGKISSTELATIF---GVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQXL 478
Query: 69 LKLMAN 74
LKL N
Sbjct: 479 LKLCGN 484
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 66/147 (44%), Gaps = 28/147 (19%)
Query: 5 DEEQITEWKEAFALFDKNGSGKI-VSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSV 63
D ++I + F D + SG + V +++ + + +NP Q + D+ D D G V
Sbjct: 1 DADEIKRLGKRFKKLDLDNSGSLSVEEFMS--LPELQQNPLVQRVIDIF---DTDGNGEV 55
Query: 64 DFESFLKLMANHIPNVDSTAELLEAFQVFDKD------------------GEKLSD---- 101
DF+ F++ ++ D +L AF+++D D G L D
Sbjct: 56 DFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQ 115
Query: 102 QEVDELIGLADENNTGHVRYEEFAKVM 128
Q VD+ I AD++ G + +EEF V+
Sbjct: 116 QIVDKTIINADKDGDGRISFEEFCAVV 142
>pdb|1H4B|A Chain A, Solution Structure Of The Birch Pollen Allergen Bet V 4
Length = 84
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 10 TEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVDFESF 68
E + F FD NG GKI + +G ++ +G + T E++ ++ E+D D G + F+ F
Sbjct: 9 AERERIFKRFDANGDGKISAAELGEALKTLG-SITPDEVKHMMAEIDTDGDGFISFQEF 66
>pdb|1KFX|S Chain S, Crystal Structure Of Human M-Calpain Form I
pdb|1KFU|S Chain S, Crystal Structure Of Human M-Calpain Form Ii
Length = 184
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 8/88 (9%)
Query: 9 ITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVDFESF 68
I W+ + FD + SG I S + A G + E L +++ D+ G++DF++F
Sbjct: 87 IKRWQAIYKQFDTDRSGTICSSELPGAFEAAGFHLNEH-LYNMIIRRYSDESGNMDFDNF 145
Query: 69 LKLMANHIPNVDSTAELLEAFQVFDKDG 96
+ + +D+ + AF+ DKDG
Sbjct: 146 ISCLV----RLDA---MFRAFKSLDKDG 166
>pdb|1JBA|A Chain A, Unmyristoylated Gcap-2 With Three Calcium Ions Bound
Length = 204
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 60/126 (47%), Gaps = 14/126 (11%)
Query: 5 DEEQITEWKEA-FALFDKNGSGKI-VSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGS 62
D E+ T++ EA F FD NG I +YV + + R E +L+ K D D G
Sbjct: 53 DNEEATQYVEAMFRAFDTNGDNTIDFLEYVAA-LNLVLRGTLEHKLKWTFKIYDKDRNGC 111
Query: 63 VDFESFLKLMANHIPNVDSTAELLEAFQV---FDKDGEKLSDQE-VDELIGLADENNTGH 118
+D + L + V+S +L +A V ++ G+ L+ +E VD + L DEN G
Sbjct: 112 IDRQELLDI-------VESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLVDENGDGQ 164
Query: 119 VRYEEF 124
+ EF
Sbjct: 165 LSLNEF 170
>pdb|1QV0|A Chain A, Atomic Resolution Structure Of Obelin From Obelia
Longissima
pdb|1QV1|A Chain A, Atomic Resolution Structure Of Obelin From Obelia
Longissima
pdb|1SL9|A Chain A, Obelin From Obelia Longissima
Length = 195
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Query: 9 ITEWKEA-FALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVDFES 67
I EW +A F +FDK+GSG I + G +P++++ E + D D+ G +D +
Sbjct: 111 IREWGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNAGDLDVDE 170
Query: 68 FLKLMANHIPNVDSTAELL 86
+ +D A+ L
Sbjct: 171 MTRQHLGFWYTLDPEADGL 189
>pdb|1JF2|A Chain A, Crystal Structure Of W92f Obelin Mutant From Obelia
Longissima At 1.72 Angstrom Resolution
pdb|1S36|A Chain A, Crystal Structure Of A Ca2+-Discharged Photoprotein:
Implications For The Mechanisms Of The Calcium Trigger
And The Bioluminescence
Length = 195
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Query: 9 ITEWKEA-FALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVDFES 67
I EW +A F +FDK+GSG I + G +P++++ E + D D+ G +D +
Sbjct: 111 IREWGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNSGDLDVDE 170
Query: 68 FLKLMANHIPNVDSTAELL 86
+ +D A+ L
Sbjct: 171 MTRQHLGFWYTLDPEADGL 189
>pdb|1EL4|A Chain A, Structure Of The Calcium-Regulated Photoprotein Obelin
Determined By Sulfur Sas
Length = 195
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Query: 9 ITEWKEA-FALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVDFES 67
I EW +A F +FDK+GSG I + G +P++++ E + D D+ G +D +
Sbjct: 111 IREWGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNSGDLDVDE 170
Query: 68 FLKLMANHIPNVDSTAELL 86
+ +D A+ L
Sbjct: 171 MTRQHLGFWYTLDPEADGL 189
>pdb|1K9U|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
pdb|1K9U|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
Length = 78
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Query: 11 EWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVDFESFLK 70
+ + F FD NG GKI + +R +G + + E++ ++ E+D D G +DF F+
Sbjct: 4 DMERIFKRFDTNGDGKISLSELTDALRTLG-STSADEVQRMMAEIDTDGDGFIDFNEFIS 62
Query: 71 LMANHIPNV 79
N P +
Sbjct: 63 F-CNANPGL 70
>pdb|2F8P|A Chain A, Crystal Structure Of Obelin Following Ca2+ Triggered
Bioluminescence Suggests Neutral Coelenteramide As The
Primary Excited State
Length = 195
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Query: 9 ITEWKEA-FALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVDFES 67
I EW +A F +FDK+GSG I + G +P++++ E + D D+ G +D +
Sbjct: 111 IREWGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNSGDLDVDE 170
Query: 68 FLKLMANHIPNVDSTAELL 86
+ +D A+ L
Sbjct: 171 MTRQHLGFWYTLDPEADGL 189
>pdb|2LVI|A Chain A, Solution Structure Of Apo-phl P 7
pdb|2LVJ|A Chain A, Solution Structure Of Hemi-mg-bound Phl P 7
pdb|2LVK|A Chain A, Solution Structure Of Ca-bound Phl P 7
Length = 77
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Query: 11 EWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVDFESFLK 70
+ + F FD NG GKI + +R +G + + E++ ++ E+D D G +DF F+
Sbjct: 3 DMERIFKRFDTNGDGKISLSELTDALRTLG-STSADEVQRMMAEIDTDGDGFIDFNEFIS 61
Query: 71 LMANHIPNV 79
N P +
Sbjct: 62 F-CNANPGL 69
>pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
pdb|3PM8|B Chain B, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
Length = 197
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 8/63 (12%)
Query: 16 FALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELED-----LLKEVDPDDVGSVDFESFLK 70
F FD +G+GKI V + R GR+ E L D LL+EVD + G +DF F+
Sbjct: 135 FKFFDIDGNGKI---SVEELKRIFGRDDIENPLIDKAIDSLLQEVDLNGDGEIDFHEFML 191
Query: 71 LMA 73
+M+
Sbjct: 192 MMS 194
>pdb|3KPX|A Chain A, Crystal Structure Analysis Of Photoprotein Clytin
Length = 198
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
Query: 9 ITEWKEA-FALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVDFES 67
I W EA F +FDK+GSG I T G P++++ E K D D+ G +D +
Sbjct: 114 IRNWGEAVFDIFDKDGSGSISLDEWKTYGGISGICPSDEDAEKTFKHCDLDNSGKLDVDE 173
Query: 68 FLKLMANHIPNVDSTAELL 86
+ +D A+ L
Sbjct: 174 MTRQHLGFWYTLDPNADGL 192
>pdb|1PON|B Chain B, Site Iii-Site Iv Troponin C Heterodimer, Nmr
Length = 36
Score = 34.7 bits (78), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 24/29 (82%)
Query: 44 TEQELEDLLKEVDPDDVGSVDFESFLKLM 72
TE+++EDL+K+ D ++ G +DF+ FLK+M
Sbjct: 3 TEEDIEDLMKDSDKNNDGRIDFDEFLKMM 31
Score = 27.3 bits (59), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 9/30 (30%), Positives = 24/30 (80%)
Query: 99 LSDQEVDELIGLADENNTGHVRYEEFAKVM 128
++++++++L+ +D+NN G + ++EF K+M
Sbjct: 2 VTEEDIEDLMKDSDKNNDGRIDFDEFLKMM 31
>pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w
Length = 191
Score = 34.3 bits (77), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 69/144 (47%), Gaps = 25/144 (17%)
Query: 9 ITEWKEAFALFDKNGSGKIVSKYVGTVMRAIG-RNPTEQELEDLLKEVDPDDVGSVDFES 67
+ + K F + D++G G I + + + G + P +L LL ++D D G +D+
Sbjct: 51 VEKLKSTFLVLDEDGKGYITKEQLKKGLEKDGLKLPYNFDL--LLDQIDSDGSGKIDYTE 108
Query: 68 FL-----------KLM--ANHIPNVD-----STAELLEAFQVFDKDGEKLSDQEVDE--- 106
F+ KL+ A + +VD +TAEL +K G ++ ++V+
Sbjct: 109 FIAAALDRKQLSKKLIYCAFRVFDVDNDGEITTAELAHILYNGNKKGN-ITQRDVNRVKR 167
Query: 107 LIGLADENNTGHVRYEEFAKVMTL 130
+I D+NN G + + EF+++M L
Sbjct: 168 MIRDVDKNNDGKIDFHEFSEMMKL 191
>pdb|1FPW|A Chain A, Structure Of Yeast Frequenin
pdb|2JU0|A Chain A, Structure Of Yeast Frequenin Bound To Pdtins 4-Kinase
Length = 190
Score = 33.9 bits (76), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 52/109 (47%), Gaps = 8/109 (7%)
Query: 16 FALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVDFESFLKLMANH 75
F +FDK+ +G I + TV+ R E++L + D + G + F+ L ++A
Sbjct: 69 FTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLTIVA-- 126
Query: 76 IPNVDSTAELLEAFQVFDKDGEKLSDQEVDELIGLADENNTGHVRYEEF 124
S +++ + ++D E + V ++ L D+N G++ +EF
Sbjct: 127 -----SVYKMMGSMVTLNED-EATPEMRVKKIFKLMDKNEDGYITLDEF 169
>pdb|2ZN8|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Alg-2
Length = 190
Score = 33.5 bits (75), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 15/62 (24%), Positives = 32/62 (51%)
Query: 9 ITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVDFESF 68
IT+W+ F +D++ SG I + + G ++Q + L+++ D G + F+ F
Sbjct: 91 ITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDF 150
Query: 69 LK 70
++
Sbjct: 151 IQ 152
>pdb|2ZRS|A Chain A, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|B Chain B, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|C Chain C, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|D Chain D, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|E Chain E, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|F Chain F, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|G Chain G, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|H Chain H, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|C Chain C, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|D Chain D, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|E Chain E, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|F Chain F, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|G Chain G, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|H Chain H, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Length = 168
Score = 33.5 bits (75), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 15/62 (24%), Positives = 32/62 (51%)
Query: 9 ITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVDFESF 68
IT+W+ F +D++ SG I + + G ++Q + L+++ D G + F+ F
Sbjct: 69 ITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDF 128
Query: 69 LK 70
++
Sbjct: 129 IQ 130
>pdb|1HQV|A Chain A, Structure Of Apoptosis-Linked Protein Alg-2
Length = 191
Score = 33.5 bits (75), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 15/62 (24%), Positives = 32/62 (51%)
Query: 9 ITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVDFESF 68
IT+W+ F +D++ SG I + + G ++Q + L+++ D G + F+ F
Sbjct: 92 ITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDF 151
Query: 69 LK 70
++
Sbjct: 152 IQ 153
>pdb|2ZNE|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
pdb|2ZNE|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
Length = 169
Score = 33.5 bits (75), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 15/62 (24%), Positives = 32/62 (51%)
Query: 9 ITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVDFESF 68
IT+W+ F +D++ SG I + + G ++Q + L+++ D G + F+ F
Sbjct: 70 ITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDF 129
Query: 69 LK 70
++
Sbjct: 130 IQ 131
>pdb|2ZN9|A Chain A, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZN9|B Chain B, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZND|A Chain A, Crystal Structure Of Ca2+-Free Form Of Des3-20alg-2
Length = 172
Score = 33.5 bits (75), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 15/62 (24%), Positives = 32/62 (51%)
Query: 9 ITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVDFESF 68
IT+W+ F +D++ SG I + + G ++Q + L+++ D G + F+ F
Sbjct: 73 ITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDF 132
Query: 69 LK 70
++
Sbjct: 133 IQ 134
>pdb|1Y1X|A Chain A, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
pdb|1Y1X|B Chain B, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
Length = 191
Score = 33.1 bits (74), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 33/63 (52%)
Query: 9 ITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVDFESF 68
I +E F D +G G++ S V + + G +EQ + L+++ D GS+ F+ +
Sbjct: 92 ILSMREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRKFDRQRRGSLGFDDY 151
Query: 69 LKL 71
++L
Sbjct: 152 VEL 154
>pdb|2JNX|A Chain A, Nmr Derived Solution Structure Of An Ef-Hand Calcium
Binding Protein From Entamoeba Histolytica
Length = 134
Score = 33.1 bits (74), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 50/124 (40%), Gaps = 15/124 (12%)
Query: 16 FALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVDFESFLKLMANH 75
F D NG G + + V + + EQ L+ + K +D D G +D F K A
Sbjct: 6 FKQLDANGDGSVSYEEVKAFVSSKRPIKNEQLLQLIFKAIDIDGNGEIDLAEFTKFAAAV 65
Query: 76 IPN--VDSTAELLEAFQVFDKDGE-KLSDQEVDEL------------IGLADENNTGHVR 120
D L +++ D DG+ KL+ +EV I AD N G++
Sbjct: 66 KEQDLSDEKVGLKILYKLMDADGDGKLTKEEVTTFFKKFGYEKVVDQIMKADANGDGYIT 125
Query: 121 YEEF 124
EEF
Sbjct: 126 LEEF 129
>pdb|3AAK|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-20alg-2f122a
Length = 172
Score = 32.7 bits (73), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 15/62 (24%), Positives = 32/62 (51%)
Query: 9 ITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVDFESF 68
IT+W+ F +D++ SG I + + G ++Q + L+++ D G + F+ F
Sbjct: 73 ITDWQNVFRTYDRDNSGMIDKNELKQALSGAGYRLSDQFHDILIRKFDRQGRGQIAFDDF 132
Query: 69 LK 70
++
Sbjct: 133 IQ 134
>pdb|3O4Y|A Chain A, Crystal Structure Of Cad Domain Of The Plasmodium Vivax
Cdpk, Pvx_11610
Length = 196
Score = 32.7 bits (73), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 63/147 (42%), Gaps = 29/147 (19%)
Query: 9 ITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRN-PTEQELEDLLKEVDPDDVGSVDFES 67
+ + K AF D+ G G I + + G P +L LL ++D D G++D+
Sbjct: 54 VQKLKAAFLHLDEEGKGNITKLQLRKGLERSGLMLPPNFDL--LLDQIDSDGSGNIDYTE 111
Query: 68 FLKLMANHIPNVDSTAELLE-AFQVFDKD----------------GEKLSD------QEV 104
FL A I + +L+ AF+VFD D G K + +V
Sbjct: 112 FL---AAAIDRRQLSKKLIYCAFRVFDVDNDGEITTAELAHVLFNGNKRGNITERDVNQV 168
Query: 105 DELIGLADENNTGHVRYEEFAKVMTLA 131
++I D+N G + + EF+++M L
Sbjct: 169 KKMIREVDKNGDGKIDFYEFSEMMKLT 195
>pdb|3MSE|B Chain B, Crystal Structure Of C-Terminal Domain Of Pf110239
Length = 180
Score = 32.3 bits (72), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 46/94 (48%), Gaps = 4/94 (4%)
Query: 2 LTLDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVG 61
L++ I E F D N +G + + + TV+ ++G + ++ +L+ +D +D G
Sbjct: 31 LSVINNHIKYINELFYKLDTNHNGSLSHREIYTVLASVG--IKKWDINRILQALDINDRG 88
Query: 62 SVDFESFLKLMANHIPNVDSTAELLEAFQVFDKD 95
++ + F+ N++ST L AF DKD
Sbjct: 89 NITYTEFMA-GCYRWKNIESTF-LKAAFNKIDKD 120
>pdb|4A0L|E Chain E, Structure Of Ddb1-Ddb2-Cul4b-Rbx1 Bound To A 12 Bp Abasic
Site Containing Dna-Duplex
pdb|4A0L|H Chain H, Structure Of Ddb1-Ddb2-Cul4b-Rbx1 Bound To A 12 Bp Abasic
Site Containing Dna-Duplex
Length = 726
Score = 32.0 bits (71), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 5 DEEQITEWKEAFALF---DKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEV 55
+E+ I KEAF F N ++++KYV + +RA + T++ELE +L ++
Sbjct: 350 NEKFINAMKEAFETFINKRPNKPAELIAKYVDSKLRAGNKEATDEELEKMLDKI 403
>pdb|4A0C|C Chain C, Structure Of The Cand1-Cul4b-Rbx1 Complex
pdb|4A0C|E Chain E, Structure Of The Cand1-Cul4b-Rbx1 Complex
Length = 741
Score = 31.6 bits (70), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 5 DEEQITEWKEAFALF---DKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEV 55
+E+ I KEAF F N ++++KYV + +RA + T++ELE +L ++
Sbjct: 365 NEKFINAMKEAFETFINKRPNKPAELIAKYVDSKLRAGNKEATDEELEKMLDKI 418
>pdb|2D58|A Chain A, Human Microglia-Specific Protein Iba1
Length = 107
Score = 31.2 bits (69), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 31/61 (50%)
Query: 12 WKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVDFESFLKL 71
+KE + FD NG+G I + ++ +G T EL+ L+ EV + + FL++
Sbjct: 34 FKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRM 93
Query: 72 M 72
M
Sbjct: 94 M 94
>pdb|2JJZ|A Chain A, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
Length = 150
Score = 31.2 bits (69), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 34/66 (51%)
Query: 7 EQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVDFE 66
E++T +KE + FD N G+I + +M +G T E++ ++ EV ++ +
Sbjct: 47 EKLTAFKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYR 106
Query: 67 SFLKLM 72
F+ +M
Sbjct: 107 DFVNMM 112
>pdb|2JJZ|B Chain B, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
pdb|2JJZ|C Chain C, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
pdb|2JJZ|D Chain D, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
pdb|2VTG|A Chain A, Crystal Structure Of Human Iba2, Trigonal Crystal Form
Length = 150
Score = 31.2 bits (69), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 34/66 (51%)
Query: 7 EQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVDFE 66
E++T +KE + FD N G+I + +M +G T E++ ++ EV ++ +
Sbjct: 47 EKLTAFKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYR 106
Query: 67 SFLKLM 72
F+ +M
Sbjct: 107 DFVNMM 112
>pdb|5PAL|A Chain A, Crystal Structure Of The Unique Parvalbumin Component From
Muscle Of The Leopard Shark (Triakis Semifasciata). The
First X-Ray Study Of An Alpha-Parvalbumin
Length = 109
Score = 30.8 bits (68), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 40/93 (43%), Gaps = 23/93 (24%)
Query: 59 DVGSVDFESFLKLMANHIPNVDSTAELLEAFQVFDKD--------------------GEK 98
D G+ D++ F L+ + A++ E F++ DKD G
Sbjct: 20 DPGTFDYKRFFHLVG---LKGKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRD 76
Query: 99 LSDQEVDELIGLADENNTGHVRYEEFAKVMTLA 131
L+D E L+ D ++ G + +EFAK++ A
Sbjct: 77 LNDTETKALLAAGDSDHDGKIGADEFAKMVAQA 109
Score = 29.3 bits (64), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Query: 10 TEWKEAFALFDKNGSGKIVSKYVGTVMR---AIGRNPTEQELEDLLKEVDPDDVGSVDFE 66
+ KE F + DK+ SG I + + V++ A GR+ + E + LL D D G + +
Sbjct: 41 AQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTETKALLAAGDSDHDGKIGAD 100
Query: 67 SFLKLMAN 74
F K++A
Sbjct: 101 EFAKMVAQ 108
>pdb|1G8I|A Chain A, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|1G8I|B Chain B, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|2LCP|A Chain A, Nmr Structure Of Calcium Loaded, Un-Myristoylated Human
Ncs-1
Length = 190
Score = 30.8 bits (68), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 45/110 (40%), Gaps = 8/110 (7%)
Query: 15 AFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVDFESFLKLMAN 74
F +FD+N G+I + R +++L K D D+ G + L ++
Sbjct: 68 VFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNEMLDIVDA 127
Query: 75 HIPNVDSTAELLEAFQVFDKDGEKLSDQEVDELIGLADENNTGHVRYEEF 124
V +T EL E E ++ VD + + D+N G + +EF
Sbjct: 128 IYQMVGNTVELPEE--------ENTPEKRVDRIFAMMDKNADGKLTLQEF 169
>pdb|2G2B|A Chain A, Nmr Structure Of The Human Allograft Inflammatory Factor 1
Length = 150
Score = 30.8 bits (68), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 31/61 (50%)
Query: 12 WKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVDFESFLKL 71
+KE + FD NG+G I + ++ +G T EL+ L+ EV + + FL++
Sbjct: 53 FKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRM 112
Query: 72 M 72
M
Sbjct: 113 M 113
>pdb|1XVJ|A Chain A, Crystal Structure Of Rat Alpha-Parvalbumin D94sG98E MUTANT
pdb|1XVJ|B Chain B, Crystal Structure Of Rat Alpha-Parvalbumin D94sG98E MUTANT
Length = 109
Score = 30.4 bits (67), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 4 LDEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAI---GRNPTEQELEDLLKEVDPDDV 60
L ++ + K+ F + DK+ SG I +G++++ R+ + +E + L+ D D
Sbjct: 35 LKKKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGS 94
Query: 61 GSVDFESFLKLMA 73
G ++ E F L+A
Sbjct: 95 GKIEVEEFSTLVA 107
>pdb|2QAC|A Chain A, The Closed Mtip-myosina-tail Complex From The Malaria
Parasite Invasion Machinery
pdb|4AOM|A Chain A, Mtip And Myoa Complex
Length = 146
Score = 30.0 bits (66), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 59/131 (45%), Gaps = 22/131 (16%)
Query: 6 EEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVDF 65
EE++ E +K+ GKI R +G P+ + E +KE+ D++ +
Sbjct: 11 EEKVDESDVRIYFNEKSSGGKISIDNASYNARKLGLAPSSID-EKKIKELYGDNLT---Y 66
Query: 66 ESFLKLMANHIPNVDSTAELLEAFQVFDKD-----------------GEKLSDQE-VDEL 107
E +L+ ++ + + D+ EL++ F FD + G+ L+DQE +D L
Sbjct: 67 EQYLEYLSICVHDKDNVEELIKMFAHFDNNCTGYLTKSQMKNILTTWGDALTDQEAIDAL 126
Query: 108 IGLADENNTGH 118
+ E+N +
Sbjct: 127 NAFSSEDNIDY 137
Score = 29.6 bits (65), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 5 DEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVD 64
D++ + E + FA FD N +G + + ++ G T+QE D L +D ++D
Sbjct: 79 DKDNVEELIKMFAHFDNNCTGYLTKSQMKNILTTWGDALTDQEAIDALNAFSSED--NID 136
Query: 65 FESFL 69
++ F
Sbjct: 137 YKLFC 141
>pdb|1KP9|A Chain A, Crystal Structure Of Mycolic Acid Cyclopropane Synthase
Cmaa1, Apo-Form
pdb|1KP9|B Chain B, Crystal Structure Of Mycolic Acid Cyclopropane Synthase
Cmaa1, Apo-Form
pdb|1KPH|A Chain A, Crystal Structure Of Mycolic Acid Cyclopropane Synthase
Cmaa1 Complexed With Sah And Dddmab
pdb|1KPH|B Chain B, Crystal Structure Of Mycolic Acid Cyclopropane Synthase
Cmaa1 Complexed With Sah And Dddmab
pdb|1KPH|C Chain C, Crystal Structure Of Mycolic Acid Cyclopropane Synthase
Cmaa1 Complexed With Sah And Dddmab
pdb|1KPH|D Chain D, Crystal Structure Of Mycolic Acid Cyclopropane Synthase
Cmaa1 Complexed With Sah And Dddmab
Length = 287
Score = 30.0 bits (66), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 51 LLKEVDPDDVGSVDFESFLKLMANHIPNVDSTAELLEAFQVFDKDGEKLSDQEVDELIGL 110
+++ V+ DV V + K ANH+ + + +E L + +V E+ D+ VD ++ +
Sbjct: 79 MMRAVEKYDVNVVGL-TLSKNQANHVQQLVANSENLRSKRVLLAGWEQF-DEPVDRIVSI 136
Query: 111 ADENNTGHVRYEEF 124
+ GH RY+ F
Sbjct: 137 GAFEHFGHERYDAF 150
>pdb|1WY9|A Chain A, Crystal Structure Of Microglia-Specific Protein, Iba1
Length = 147
Score = 30.0 bits (66), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 33/65 (50%)
Query: 8 QITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVDFES 67
++ +K + FD NG+G I + ++ +G T EL+ L++EV + +
Sbjct: 46 KLEAFKVKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKRLIREVSSGSEETFSYSD 105
Query: 68 FLKLM 72
FL++M
Sbjct: 106 FLRMM 110
>pdb|1LDK|B Chain B, Structure Of The Cul1-Rbx1-Skp1-F Boxskp2 Scf Ubiquitin
Ligase Complex
Length = 366
Score = 29.6 bits (65), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 23/34 (67%)
Query: 22 NGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEV 55
+ S +++++Y ++++ +NP E ELED L +V
Sbjct: 6 SKSPELLARYCDSLLKKSSKNPEEAELEDTLNQV 39
>pdb|1JFJ|A Chain A, Nmr Solution Structure Of An Ef-Hand Calcium Binding
Protein From Entamoeba Histolytica
pdb|1JFK|A Chain A, Minimum Energy Representative Structure Of A Calcium Bound
Ef-hand Protein From Entamoeba Histolytica
Length = 134
Score = 29.3 bits (64), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 50/124 (40%), Gaps = 15/124 (12%)
Query: 16 FALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVDFESFLKLMANH 75
F D NG G + + V + EQ L+ + K +D D G +D F K +
Sbjct: 6 FKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSI 65
Query: 76 IPN--VDSTAELLEAFQVFDKDGE-KLSDQEVD------------ELIGLADENNTGHVR 120
D L +++ D DG+ KL+ +EV E + AD N G++
Sbjct: 66 QGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGIEKVAEQVMKADANGDGYIT 125
Query: 121 YEEF 124
EEF
Sbjct: 126 LEEF 129
>pdb|2NXQ|A Chain A, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|2NXQ|B Chain B, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|3PX1|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3PX1|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3QJK|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3QJK|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3ULG|A Chain A, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
pdb|3ULG|B Chain B, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
Length = 134
Score = 29.3 bits (64), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 50/124 (40%), Gaps = 15/124 (12%)
Query: 16 FALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVDFESFLKLMANH 75
F D NG G + + V + EQ L+ + K +D D G +D F K +
Sbjct: 6 FKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSI 65
Query: 76 IPN--VDSTAELLEAFQVFDKDGE-KLSDQEVD------------ELIGLADENNTGHVR 120
D L +++ D DG+ KL+ +EV E + AD N G++
Sbjct: 66 QGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGIEKVAEQVMKADANGDGYIT 125
Query: 121 YEEF 124
EEF
Sbjct: 126 LEEF 129
>pdb|1LDJ|A Chain A, Structure Of The Cul1-rbx1-skp1-f Boxskp2 Scf Ubiquitin
Ligase Complex
Length = 760
Score = 29.3 bits (64), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 22/32 (68%)
Query: 24 SGKIVSKYVGTVMRAIGRNPTEQELEDLLKEV 55
S +++++Y ++++ +NP E ELED L +V
Sbjct: 402 SPELLARYCDSLLKKSSKNPEEAELEDTLNQV 433
>pdb|1U6G|A Chain A, Crystal Structure Of The Cand1-Cul1-Roc1 Complex
Length = 776
Score = 29.3 bits (64), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 22/32 (68%)
Query: 24 SGKIVSKYVGTVMRAIGRNPTEQELEDLLKEV 55
S +++++Y ++++ +NP E ELED L +V
Sbjct: 418 SPELLARYCDSLLKKSSKNPEEAELEDTLNQV 449
>pdb|2IF4|A Chain A, Crystal Structure Of A Multi-Domain Immunophilin From
Arabidopsis Thaliana
Length = 338
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 24/41 (58%), Gaps = 4/41 (9%)
Query: 76 IPNVDSTAELLEAFQV--FD--KDGEKLSDQEVDELIGLAD 112
PNV A+LL +V FD K+G+ SD V+E IG AD
Sbjct: 140 FPNVPPMADLLYEVEVIGFDETKEGKARSDMTVEERIGAAD 180
>pdb|2F4E|A Chain A, N-Terminal Domain Of Fkbp42 From Arabidopsis Thaliana
pdb|2F4E|B Chain B, N-Terminal Domain Of Fkbp42 From Arabidopsis Thaliana
Length = 180
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 24/40 (60%), Gaps = 4/40 (10%)
Query: 77 PNVDSTAELLEAFQV--FD--KDGEKLSDQEVDELIGLAD 112
PNV A+LL +V FD K+G+ SD V+E IG AD
Sbjct: 141 PNVPPMADLLYEVEVIGFDETKEGKARSDMTVEERIGAAD 180
>pdb|1KPG|A Chain A, Crystal Structure Of Mycolic Acid Cyclopropane Synthase
Cmaa1 Complexed With Sah And Ctab
pdb|1KPG|B Chain B, Crystal Structure Of Mycolic Acid Cyclopropane Synthase
Cmaa1 Complexed With Sah And Ctab
pdb|1KPG|C Chain C, Crystal Structure Of Mycolic Acid Cyclopropane Synthase
Cmaa1 Complexed With Sah And Ctab
pdb|1KPG|D Chain D, Crystal Structure Of Mycolic Acid Cyclopropane Synthase
Cmaa1 Complexed With Sah And Ctab
Length = 287
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Query: 53 KEVDPDDVGSVDFESFLKLMANHIPNVDSTAELLEAFQVFDKDGEKLSDQEVDELIGLAD 112
+ V+ DV V + K ANH+ + + +E L + +V E+ D+ VD ++ +
Sbjct: 81 RAVEKYDVNVVGL-TLSKNQANHVQQLVANSENLRSKRVLLAGWEQF-DEPVDRIVSIGA 138
Query: 113 ENNTGHVRYEEF 124
+ GH RY+ F
Sbjct: 139 FEHFGHERYDAF 150
>pdb|1PON|A Chain A, Site Iii-Site Iv Troponin C Heterodimer, Nmr
pdb|1CTA|A Chain A, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTA|B Chain B, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTD|A Chain A, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTD|B Chain B, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
Length = 36
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 11 EWKEAFALFDKNGSGKIVSKYVGTVMRAIG 40
E AF +FDKN G I + +G ++RA G
Sbjct: 6 ELANAFRIFDKNADGYIDIEELGEILRATG 35
>pdb|2L2E|A Chain A, Solution Nmr Structure Of Myristoylated Ncs1p In Apo Form
Length = 190
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/111 (21%), Positives = 46/111 (41%), Gaps = 8/111 (7%)
Query: 15 AFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVDFESFLKLMAN 74
F +FD + +G I K + R +L + D D+ G + ++ L+++
Sbjct: 68 VFNVFDADKNGYIDFKEFICALSVTSRGELNDKLIWAFQLYDLDNNGLISYDEMLRIVDA 127
Query: 75 HIPNVDSTAELLEAFQVFDKDGEKLSDQEVDELIGLADENNTGHVRYEEFA 125
V S +L E E ++ V+++ + D+N G + EEF
Sbjct: 128 IYKMVGSMVKLPE--------DEDTPEKRVNKIFNMMDKNKDGQLTLEEFC 170
>pdb|3AAJ|A Chain A, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
pdb|3AAJ|B Chain B, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
Length = 167
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/62 (24%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 9 ITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVDFESF 68
IT+W+ F +D++ SG I + + G ++Q + L+++ D G + F+ F
Sbjct: 70 ITDWQNVFRTYDRDNSGMIDKNELKQALS--GYRLSDQFHDILIRKFDRQGRGQIAFDDF 127
Query: 69 LK 70
++
Sbjct: 128 IQ 129
>pdb|4F52|A Chain A, Structure Of A Glomulin-Rbx1-Cul1 Complex
pdb|4F52|C Chain C, Structure Of A Glomulin-Rbx1-Cul1 Complex
Length = 282
Score = 28.1 bits (61), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 10/28 (35%), Positives = 19/28 (67%)
Query: 28 VSKYVGTVMRAIGRNPTEQELEDLLKEV 55
+++Y ++++ +NP E ELED L +V
Sbjct: 14 LARYCDSLLKKSSKNPEEAELEDTLNQV 41
>pdb|1BJF|A Chain A, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
pdb|1BJF|B Chain B, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
Length = 193
Score = 28.1 bits (61), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 42/111 (37%), Gaps = 8/111 (7%)
Query: 16 FALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVDFESFLKLMANH 75
F FD NG G I + + R EQ+L+ D D G + L+++
Sbjct: 69 FRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQAI 128
Query: 76 IPNVDSTAELLEAFQVFDKDGEKLSDQEVDELIGLADENNTGHVRYEEFAK 126
V S ++ E +K EK+ Q D N G + EEF +
Sbjct: 129 YKMVSSVMKMPEDESTPEKRTEKIFRQ--------MDTNRDGKLSLEEFIR 171
Score = 26.9 bits (58), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 44 TEQELEDLLKEVDPD-DVGSVDFESFLKLMANHIPNVDSTAELLEAFQVFDKDGE 97
TE E+++ K D G + E F K+ N P D++ F+ FD +G+
Sbjct: 23 TEHEIQEWYKGFLRDCPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGD 77
>pdb|3E3R|A Chain A, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
pdb|3E3R|B Chain B, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
Length = 204
Score = 28.1 bits (61), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/109 (22%), Positives = 48/109 (44%), Gaps = 3/109 (2%)
Query: 16 FALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVDFESFLKLMANH 75
F D++GS + + + +G + E E + ++ D + G++D E FL+ +
Sbjct: 43 FRQLDRDGSRSLDADEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEFLRALRPP 102
Query: 76 IPNVDSTAELLEAFQVFDKDGEKLSDQEVDELIGLADENNTGHVRYEEF 124
+ A + AF D+ G+ + VD+L G+ VR E+
Sbjct: 103 MSQA-REAVIAAAFAKLDRSGDGVV--TVDDLRGVYSGRAHPKVRSGEW 148
>pdb|3RTR|A Chain A, A Ring E3-Substrate Complex Poised For Ubiquitin-Like
Protein Transfer: Structural Insights Into Cullin-Ring
Ligases
pdb|3RTR|C Chain C, A Ring E3-Substrate Complex Poised For Ubiquitin-Like
Protein Transfer: Structural Insights Into Cullin-Ring
Ligases
pdb|3RTR|E Chain E, A Ring E3-Substrate Complex Poised For Ubiquitin-Like
Protein Transfer: Structural Insights Into Cullin-Ring
Ligases
pdb|3RTR|G Chain G, A Ring E3-Substrate Complex Poised For Ubiquitin-Like
Protein Transfer: Structural Insights Into Cullin-Ring
Ligases
Length = 368
Score = 27.7 bits (60), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 38/69 (55%), Gaps = 12/69 (17%)
Query: 28 VSKYVGTVMRAIGRNPTEQELEDLL-------KEVDPDDVGSVDFESFL-KLMANHIPNV 79
+++Y ++++ +NP E ELED L K+++ DV F+ F K++A + +
Sbjct: 14 LARYCDSLLKKSSKNPEEAELEDTLNQVMEKFKKIEDKDV----FQKFYAKMLAKRLVHQ 69
Query: 80 DSTAELLEA 88
+S ++ EA
Sbjct: 70 NSASDDAEA 78
>pdb|2PMY|A Chain A, Ef-Hand Domain Of Human Rasef
pdb|2PMY|B Chain B, Ef-Hand Domain Of Human Rasef
Length = 91
Score = 27.7 bits (60), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/66 (22%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Query: 5 DEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVD 64
D E++ + FA D N SG++ + + + P + E + + +D D G++
Sbjct: 22 DGEELARLRSVFAACDANRSGRLEREEFRALCTELRVRPADAEA--VFQRLDADRDGAIT 79
Query: 65 FESFLK 70
F+ F +
Sbjct: 80 FQEFAR 85
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 27.7 bits (60), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 43/84 (51%), Gaps = 10/84 (11%)
Query: 4 LDEEQIT-EWKEAFALFDKNGSG------KIVSKYVGTVMRAIGRNPTEQELEDLLKEVD 56
LDE+ +T + +E F + +K G G K + K G ++ AI + P E +L++++KE+
Sbjct: 18 LDEDSLTKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIV-AIKQVPVESDLQEIIKEI- 75
Query: 57 PDDVGSVDFESFLKLMANHIPNVD 80
+ D +K ++ N D
Sbjct: 76 -SIMQQCDSPHVVKYYGSYFKNTD 98
>pdb|2BEC|A Chain A, Crystal Structure Of Chp2 In Complex With Its Binding
Region In Nhe1 And Insights Into The Mechanism Of Ph
Regulation
Length = 202
Score = 27.7 bits (60), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 62/152 (40%), Gaps = 44/152 (28%)
Query: 16 FALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVDFESFLKLMANH 75
F D+N G +S+ + A+ NP + +++ PD VDF F++++A+
Sbjct: 35 FRALDRNKKG-YLSRMDLQQIGALAVNPLG---DRIIESFFPDGSQRVDFPGFVRVLAHF 90
Query: 76 IPNVDSTAE----------------LLEAFQVF--DKDGEKLSDQEVDELIGL------- 110
P D E L AFQ++ D+DG K+S E+ +++ L
Sbjct: 91 RPVEDEDTETQDPKKPEPLNSRRNKLHYAFQLYDLDRDG-KISRHEMLQVLRLMVGVQVT 149
Query: 111 --------------ADENNTGHVRYEEFAKVM 128
ADE+ G V + EF K +
Sbjct: 150 EEQLENIADRTVQEADEDGDGAVSFVEFTKSL 181
>pdb|2AUC|A Chain A, Structure Of The Plasmodium Mtip-Myoa Complex, A Key
Component Of The Parasite Invasion Motor
pdb|2AUC|B Chain B, Structure Of The Plasmodium Mtip-Myoa Complex, A Key
Component Of The Parasite Invasion Motor
pdb|2AUC|C Chain C, Structure Of The Plasmodium Mtip-Myoa Complex, A Key
Component Of The Parasite Invasion Motor
Length = 126
Score = 27.7 bits (60), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 23/55 (41%)
Query: 5 DEEQITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDD 59
D + E + F+ FD N SG + ++ G TEQE D L +D
Sbjct: 60 DRDNXEELIKXFSHFDNNSSGFLTKNQXKNILTTWGDALTEQEANDALNAFSSED 114
Score = 26.9 bits (58), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 39/79 (49%), Gaps = 10/79 (12%)
Query: 21 KNGSGKIVSKYVGTVMRAIGRNPT---EQELEDLLKEVDPDDVGSVDFESFLKLMANHIP 77
K+ +GK+ + R +G P+ E+++ DL + S+ +E +L+ + +
Sbjct: 7 KSSNGKLRIEDASHNARKLGLAPSSTDEKKIRDLYGD-------SLTYEQYLEYLTXCVH 59
Query: 78 NVDSTAELLEAFQVFDKDG 96
+ D+ EL++ F FD +
Sbjct: 60 DRDNXEELIKXFSHFDNNS 78
>pdb|1QX2|A Chain A, X-Ray Structure Of Calcium-Loaded Calbindomodulin (A
Calbindin D9k Re- Engineered To Undergo A
Conformational Opening) At 1.44 A Resolution
pdb|1QX2|B Chain B, X-Ray Structure Of Calcium-Loaded Calbindomodulin (A
Calbindin D9k Re- Engineered To Undergo A
Conformational Opening) At 1.44 A Resolution
Length = 76
Score = 27.3 bits (59), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
Query: 11 EWKEAFALFD-KNGSGKIVSKY-VGTVMRAIGRNPTE--QELEDLLKEVDPDDVGSVDFE 66
E K AF +F K G +SK + VM+ +G + + L+++++EVD + G V FE
Sbjct: 6 EIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFE 65
Query: 67 SFLKLM 72
FL +M
Sbjct: 66 EFLVMM 71
>pdb|3FH2|A Chain A, The Crystal Structure Of The Probable Atp-Dependent
Protease (Heat Shock Protein) From Corynebacterium
Glutamicum
Length = 146
Score = 27.3 bits (59), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 102 QEVDELIGLADENNTGHVRYEEFAK 126
QEV+E+IG + TGH+ + AK
Sbjct: 63 QEVEEIIGQGSQPTTGHIPFTPRAK 87
>pdb|2ERC|A Chain A, Crystal Structure Of Ermc' A Rrna-Methyl Transferase
pdb|2ERC|B Chain B, Crystal Structure Of Ermc' A Rrna-Methyl Transferase
pdb|1QAM|A Chain A, The Structure Of The Rrna Methyltransferase Ermc':
Implications For The Reaction Mechanism
pdb|1QAN|A Chain A, The Structure Of The Rrna Methyltransferase Ermc':
Implications For The Reaction Mechanism
pdb|1QAO|A Chain A, The Structure Of The Rrna Methyltransferase Ermc':
Implications For The Reaction Mechanism
pdb|1QAQ|A Chain A, The Structure Of The Rrna Methyltransferase Ermc':
Implications For The Reaction Mechanism
Length = 244
Score = 26.9 bits (58), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Query: 20 DKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVDFESFLKLMANH 75
DK V K+V + I T+ + + LK DD+ ++ FE FL L ++
Sbjct: 187 DKQKYNYFVMKWVNKEYKKIF---TKNQFNNSLKHAGIDDLNNISFEQFLSLFNSY 239
>pdb|4DUQ|A Chain A, The Structure Of Ca2+-Loaded S100a2 At 1.3a Resolution
pdb|4DUQ|B Chain B, The Structure Of Ca2+-Loaded S100a2 At 1.3a Resolution
Length = 98
Score = 26.9 bits (58), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 96 GEKLSDQEVDELIGLADENNTGHVRYEEFAKVMTL 130
GEK+ ++ + +L+G DEN+ V ++E+A + L
Sbjct: 48 GEKVDEEGLKKLMGSLDENSDQQVDFQEYAVFLAL 82
>pdb|1YX7|A Chain A, Nmr Structure Of Calsensin, Energy Minimized Average
Structure.
pdb|1YX8|A Chain A, Nmr Structure Of Calsensin, 20 Low Energy Structures
Length = 83
Score = 26.9 bits (58), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 6/66 (9%)
Query: 10 TEWKEAFALFDKNGSGKIVSKYVGTVM------RAIGRNPTEQELEDLLKEVDPDDVGSV 63
E + AF D NG G + + + T M +A+ ++ ++ L+K D + G +
Sbjct: 7 AELEAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMADKNSDGKI 66
Query: 64 DFESFL 69
E FL
Sbjct: 67 SKEEFL 72
Score = 26.2 bits (56), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
Query: 86 LEAFQVFDKDGEKLSDQEVDELIGLADENNTGHVRYEEF 124
L+A++ KD K + +LI +AD+N+ G + EEF
Sbjct: 36 LDAYKALSKDKVK---EASAKLIKMADKNSDGKISKEEF 71
>pdb|2RGI|A Chain A, Crystal Structure Of Ca2+-Free S100a2 At 1.6 A Resolution
pdb|2RGI|B Chain B, Crystal Structure Of Ca2+-Free S100a2 At 1.6 A Resolution
Length = 98
Score = 26.9 bits (58), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 96 GEKLSDQEVDELIGLADENNTGHVRYEEFAKVMTL 130
GEK+ ++ + +L+G DEN+ V ++E+A + L
Sbjct: 48 GEKVDEEGLKKLMGSLDENSDQQVDFQEYAVFLAL 82
>pdb|3HLU|A Chain A, Crystal Structure Of Uncharacterized Protein Conserved
In Bacteria Duf2179 From Eubacterium Ventriosum
pdb|3HLU|B Chain B, Crystal Structure Of Uncharacterized Protein Conserved
In Bacteria Duf2179 From Eubacterium Ventriosum
Length = 96
Score = 26.6 bits (57), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 35 VMRAIGRNPTEQELEDLLKEVDPD 58
V+ + R T ++ +LLKEVDPD
Sbjct: 49 VIXCVXRKATLVKVRNLLKEVDPD 72
>pdb|1F4O|A Chain A, Crystal Structure Of Grancalcin With Bound Calcium
pdb|1F4O|B Chain B, Crystal Structure Of Grancalcin With Bound Calcium
pdb|1F4Q|A Chain A, Crystal Structure Of Apo Grancalcin
pdb|1F4Q|B Chain B, Crystal Structure Of Apo Grancalcin
Length = 165
Score = 26.6 bits (57), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 14/61 (22%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 9 ITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVDFESF 68
+ WKE F D++GSG + + + +G + Q L ++K + G + F+ +
Sbjct: 69 LNAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRYSKN--GRIFFDDY 126
Query: 69 L 69
+
Sbjct: 127 V 127
>pdb|1K95|A Chain A, Crystal Structure Of Des(1-52)grancalcin With Bound
Calcium
pdb|1K94|A Chain A, Crystal Structure Of Des(1-52)grancalcin With Bound
Calcium
pdb|1K94|B Chain B, Crystal Structure Of Des(1-52)grancalcin With Bound
Calcium
Length = 165
Score = 26.6 bits (57), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 14/64 (21%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Query: 9 ITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVDFESF 68
+ WKE F D++GSG + + + +G + Q L ++K + G + F+ +
Sbjct: 69 LNAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRYSKN--GRIFFDDY 126
Query: 69 LKLM 72
+
Sbjct: 127 VACC 130
>pdb|3PAT|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|2PAS|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|1PVA|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
pdb|1PVA|B Chain B, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
Length = 110
Score = 26.2 bits (56), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
Query: 13 KEAFALFDKNGSGKIVS---KYVGTVMRAIGRNPTEQELEDLLKEVDPDDVGSVDFESFL 69
K+ F D + SG I K+V A GR+ T+ E + LK D D G + + F
Sbjct: 45 KKVFKAIDADASGFIEEEELKFVLKSFAADGRDLTDAETKAFLKAADKDGDGKIGIDEFE 104
Query: 70 KLM 72
L+
Sbjct: 105 TLV 107
>pdb|2D8N|A Chain A, Crystal Structure Of Human Recoverin At 2.2 A Resolution
Length = 207
Score = 26.2 bits (56), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 7/52 (13%)
Query: 8 QITEWKEAFALFDKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEVDPDD 59
Q EW AF+L+D +G+G I V ++ AI + T ++++ L PDD
Sbjct: 107 QKLEW--AFSLYDVDGNGTISKNEVLEIVXAIFKXITPEDVKLL-----PDD 151
>pdb|3P0J|A Chain A, Leishmania Major Tyrosyl-Trna Synthetase In Complex With
Tyrosinol, Triclinic Crystal Form 1
pdb|3P0J|B Chain B, Leishmania Major Tyrosyl-Trna Synthetase In Complex With
Tyrosinol, Triclinic Crystal Form 1
pdb|3P0J|C Chain C, Leishmania Major Tyrosyl-Trna Synthetase In Complex With
Tyrosinol, Triclinic Crystal Form 1
pdb|3P0J|D Chain D, Leishmania Major Tyrosyl-Trna Synthetase In Complex With
Tyrosinol, Triclinic Crystal Form 1
Length = 690
Score = 25.8 bits (55), Expect = 6.6, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Query: 49 EDLLKEVDPDDVGSVDFESFLKLMANHIPNVDSTAELLEAFQVFDKDGEKL 99
ED LK D+V ++ L+ + H + + ELLEA + + KDG L
Sbjct: 323 EDALKSCLIDEVNAL-----LEPVRQHFASNEEAHELLEAVKSYRKDGATL 368
>pdb|3P0H|A Chain A, Leishmania Major Tyrosyl-Trna Synthetase In Complex With
Fisetin, Cubic Crystal Form
pdb|3P0H|B Chain B, Leishmania Major Tyrosyl-Trna Synthetase In Complex With
Fisetin, Cubic Crystal Form
pdb|3P0I|A Chain A, Leishmania Major Tyrosyl-Trna Synthetase In Complex With
Tyrosinol, Cubic Crystal Form
pdb|3P0I|B Chain B, Leishmania Major Tyrosyl-Trna Synthetase In Complex With
Tyrosinol, Cubic Crystal Form
Length = 690
Score = 25.8 bits (55), Expect = 6.7, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Query: 49 EDLLKEVDPDDVGSVDFESFLKLMANHIPNVDSTAELLEAFQVFDKDGEKL 99
ED LK D+V ++ L+ + H + + ELLEA + + KDG L
Sbjct: 323 EDALKSCLIDEVNAL-----LEPVRQHFASNEEAHELLEAVKSYRKDGATL 368
>pdb|2DF4|B Chain B, Structure Of Trna-Dependent Amidotransferase Gatcab
Complexed With Mn2+
pdb|2DQN|B Chain B, Structure Of Trna-Dependent Amidotransferase Gatcab
Complexed With Asn
pdb|2F2A|B Chain B, Structure Of Trna-Dependent Amidotransferase Gatcab
Complexed With Gln
pdb|2G5H|B Chain B, Structure Of Trna-Dependent Amidotransferase Gatcab
pdb|2G5I|B Chain B, Structure Of Trna-dependent Amidotransferase Gatcab
Complexed With Adp-alf4
pdb|3IP4|B Chain B, The High Resolution Structure Of Gatcab
Length = 483
Score = 25.4 bits (54), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 21 KNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKE 54
KNG GK + VG +M+A Q + LLK+
Sbjct: 437 KNGKGKAMGFLVGQIMKASKGQANPQLVNQLLKQ 470
>pdb|1U89|A Chain A, Solution Structure Of Vbs2 Fragment Of Talin
Length = 139
Score = 25.4 bits (54), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 23/43 (53%)
Query: 46 QELEDLLKEVDPDDVGSVDFESFLKLMANHIPNVDSTAELLEA 88
Q DL+ + D G D E+ KL++ D+TA+++EA
Sbjct: 81 QATSDLVNAIKADAEGESDLENSRKLLSAAKILADATAKMVEA 123
>pdb|2L7A|A Chain A, Solution Structure Of The Talin Vbs2b Domain
Length = 131
Score = 25.4 bits (54), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 24/45 (53%)
Query: 46 QELEDLLKEVDPDDVGSVDFESFLKLMANHIPNVDSTAELLEAFQ 90
Q DL+ + D G D E+ KL++ D+TA+++EA +
Sbjct: 51 QATSDLVNAIKADAEGESDLENSRKLLSAAKILADATAKMVEAAK 95
>pdb|3HY2|A Chain A, Crystal Structure Of Sulfiredoxin In Complex With
Peroxiredoxin I And Atp:mg2+
pdb|3HY2|B Chain B, Crystal Structure Of Sulfiredoxin In Complex With
Peroxiredoxin I And Atp:mg2+
Length = 206
Score = 25.4 bits (54), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 3/31 (9%)
Query: 70 KLMANHIP---NVDSTAELLEAFQVFDKDGE 97
++ N +P +VD T L++AFQ DK GE
Sbjct: 141 QITVNDLPVGRSVDETLRLVQAFQFTDKHGE 171
>pdb|2RII|A Chain A, Crystal Structure Of Human Peroxiredoxin I In Complex With
Sulfiredoxin
pdb|2RII|B Chain B, Crystal Structure Of Human Peroxiredoxin I In Complex With
Sulfiredoxin
Length = 199
Score = 25.4 bits (54), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 3/31 (9%)
Query: 70 KLMANHIP---NVDSTAELLEAFQVFDKDGE 97
++ N +P +VD T L++AFQ DK GE
Sbjct: 141 QITVNDLPVGRSVDETLRLVQAFQFTDKHGE 171
>pdb|3L9F|A Chain A, The Crystal Structure Of Smu.1604c From Streptococcus
Mutans Ua159
pdb|3L9F|B Chain B, The Crystal Structure Of Smu.1604c From Streptococcus
Mutans Ua159
pdb|3L9F|C Chain C, The Crystal Structure Of Smu.1604c From Streptococcus
Mutans Ua159
pdb|3L9F|D Chain D, The Crystal Structure Of Smu.1604c From Streptococcus
Mutans Ua159
Length = 204
Score = 25.4 bits (54), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 21/42 (50%)
Query: 85 LLEAFQVFDKDGEKLSDQEVDELIGLADENNTGHVRYEEFAK 126
L E +++ K GE QE+ GLA +T V EE AK
Sbjct: 163 LSENLEIWKKKGELTPTQEITIKYGLAQYKSTKKVLEEELAK 204
>pdb|2HYE|C Chain C, Crystal Structure Of The Ddb1-cul4a-rbx1-sv5v Complex
Length = 759
Score = 25.4 bits (54), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 5 DEEQITEWKEAFALF---DKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEV 55
+E + KE+F F N ++++K+V + +RA + T++ELE L ++
Sbjct: 383 NERFVNLMKESFETFINKRPNKPAELIAKHVDSKLRAGNKEATDEELERTLDKI 436
>pdb|3QPM|A Chain A, Crystal Structure Of Peroxiredoxin Prx4 From Pseudosciaena
Crocea
pdb|3QPM|B Chain B, Crystal Structure Of Peroxiredoxin Prx4 From Pseudosciaena
Crocea
pdb|3QPM|C Chain C, Crystal Structure Of Peroxiredoxin Prx4 From Pseudosciaena
Crocea
pdb|3QPM|D Chain D, Crystal Structure Of Peroxiredoxin Prx4 From Pseudosciaena
Crocea
pdb|3QPM|E Chain E, Crystal Structure Of Peroxiredoxin Prx4 From Pseudosciaena
Crocea
Length = 240
Score = 25.4 bits (54), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 78 NVDSTAELLEAFQVFDKDGE 97
+VD T L++AFQ DK GE
Sbjct: 193 SVDETLRLVQAFQYTDKHGE 212
>pdb|4A0K|A Chain A, Structure Of Ddb1-Ddb2-Cul4a-Rbx1 Bound To A 12 Bp Abasic
Site Containing Dna-Duplex
Length = 742
Score = 25.4 bits (54), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 5 DEEQITEWKEAFALF---DKNGSGKIVSKYVGTVMRAIGRNPTEQELEDLLKEV 55
+E + KE+F F N ++++K+V + +RA + T++ELE L ++
Sbjct: 366 NERFVNLMKESFETFINKRPNKPAELIAKHVDSKLRAGNKEATDEELERTLDKI 419
>pdb|3TJB|A Chain A, Crystal Structure Of Wild-Type Human Peroxiredoxin Iv
pdb|3TJB|B Chain B, Crystal Structure Of Wild-Type Human Peroxiredoxin Iv
pdb|3TJB|C Chain C, Crystal Structure Of Wild-Type Human Peroxiredoxin Iv
pdb|3TJB|D Chain D, Crystal Structure Of Wild-Type Human Peroxiredoxin Iv
pdb|3TJB|E Chain E, Crystal Structure Of Wild-Type Human Peroxiredoxin Iv
Length = 254
Score = 25.4 bits (54), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 3/31 (9%)
Query: 70 KLMANHIP---NVDSTAELLEAFQVFDKDGE 97
++ N +P +VD T L++AFQ DK GE
Sbjct: 196 QITLNDLPVGRSVDETLRLVQAFQYTDKHGE 226
>pdb|3TKR|A Chain A, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
pdb|3TKR|I Chain I, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
pdb|3TKR|G Chain G, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
pdb|3TKR|C Chain C, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
pdb|3TKR|F Chain F, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
pdb|3TKR|D Chain D, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
pdb|3TKR|B Chain B, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
pdb|3TKR|H Chain H, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
pdb|3TKR|E Chain E, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
pdb|3TKR|J Chain J, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
Length = 246
Score = 25.4 bits (54), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 3/31 (9%)
Query: 70 KLMANHIP---NVDSTAELLEAFQVFDKDGE 97
++ N +P +VD T L++AFQ DK GE
Sbjct: 188 QITLNDLPVGRSVDETLRLVQAFQYTDKHGE 218
>pdb|3TKP|A Chain A, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
The Reduced Form
pdb|3TKP|B Chain B, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
The Reduced Form
pdb|3TKP|C Chain C, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
The Reduced Form
pdb|3TKP|D Chain D, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
The Reduced Form
pdb|3TKP|E Chain E, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
The Reduced Form
pdb|3TKQ|A Chain A, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With Mixed Conformation
pdb|3TKQ|B Chain B, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With Mixed Conformation
pdb|3TKQ|C Chain C, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With Mixed Conformation
pdb|3TKQ|D Chain D, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With Mixed Conformation
pdb|3TKQ|E Chain E, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With Mixed Conformation
pdb|3TKS|E Chain E, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
Three Different Redox States
Length = 246
Score = 25.4 bits (54), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 3/31 (9%)
Query: 70 KLMANHIP---NVDSTAELLEAFQVFDKDGE 97
++ N +P +VD T L++AFQ DK GE
Sbjct: 188 QITLNDLPVGRSVDETLRLVQAFQYTDKHGE 218
>pdb|2PN8|A Chain A, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
pdb|2PN8|B Chain B, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
pdb|2PN8|C Chain C, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
pdb|2PN8|D Chain D, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
pdb|2PN8|E Chain E, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
pdb|2PN8|F Chain F, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
pdb|2PN8|G Chain G, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
pdb|2PN8|H Chain H, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
pdb|2PN8|I Chain I, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
pdb|2PN8|J Chain J, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
Length = 211
Score = 25.4 bits (54), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 3/31 (9%)
Query: 70 KLMANHIP---NVDSTAELLEAFQVFDKDGE 97
++ N +P +VD T L++AFQ DK GE
Sbjct: 153 QITLNDLPVGRSVDETLRLVQAFQYTDKHGE 183
>pdb|3TKS|A Chain A, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
Three Different Redox States
pdb|3TKS|B Chain B, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
Three Different Redox States
pdb|3TKS|C Chain C, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
Three Different Redox States
pdb|3TKS|D Chain D, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
Three Different Redox States
Length = 246
Score = 25.4 bits (54), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 3/31 (9%)
Query: 70 KLMANHIP---NVDSTAELLEAFQVFDKDGE 97
++ N +P +VD T L++AFQ DK GE
Sbjct: 188 QITLNDLPVGRSVDETLRLVQAFQYTDKHGE 218
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.312 0.133 0.365
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,208,543
Number of Sequences: 62578
Number of extensions: 176513
Number of successful extensions: 1316
Number of sequences better than 100.0: 326
Number of HSP's better than 100.0 without gapping: 283
Number of HSP's successfully gapped in prelim test: 43
Number of HSP's that attempted gapping in prelim test: 446
Number of HSP's gapped (non-prelim): 483
length of query: 131
length of database: 14,973,337
effective HSP length: 88
effective length of query: 43
effective length of database: 9,466,473
effective search space: 407058339
effective search space used: 407058339
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 46 (22.3 bits)