BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6113
(406 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3KVO|A Chain A, Crystal Structure Of The Catalytic Domain Of Human
Hydroxysteroid Dehydrogenase Like 2 (Hsdl2)
pdb|3KVO|B Chain B, Crystal Structure Of The Catalytic Domain Of Human
Hydroxysteroid Dehydrogenase Like 2 (Hsdl2)
Length = 346
Score = 236 bits (601), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 119/200 (59%), Positives = 149/200 (74%), Gaps = 5/200 (2%)
Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
+I +AV A+ KFGGIDILVNNASAISLT+T +TP K+ DLM +N RGTYL S+ C+PY
Sbjct: 115 QISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPY 174
Query: 198 LKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPR 257
LKKS AHILNISPPLNLNP WFK H AYTI+KYGMSM LGMAEEFKG+ IAVNALWP+
Sbjct: 175 LKKSKVAHILNISPPLNLNPVWFKQHCAYTIAKYGMSMYVLGMAEEFKGE-IAVNALWPK 233
Query: 258 TAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFLIDDEVLKAQHID 317
TAI+TAA++ML G +++ RK +I+ADAAY I P S TG F+ID+ +LK + I+
Sbjct: 234 TAIHTAAMDMLGGPGIESQC--RKVDIIADAAYSIF-QKPKSFTGNFVIDENILKEEGIE 290
Query: 318 -LEQYSYVPNGAAEGSWHID 336
+ Y+ P + + +D
Sbjct: 291 NFDVYAIKPGHPLQPDFFLD 310
Score = 166 bits (419), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 80/128 (62%), Positives = 95/128 (74%)
Query: 3 NTGKLSGLTIFITGASRXXXXXXXXXXXXXXXNIVIAAKTAEPHPKLPGTIYSAAKEVED 62
NTG+L+G T+FITGASR NIVIAAKTA+PHPKL GTIY+AA+E+E
Sbjct: 39 NTGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEA 98
Query: 63 AGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQ 122
GG LPCIVD+RDE + +AV A+ KFGGIDILVNNASAISLT+T +TP K+ DLM
Sbjct: 99 VGGKALPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMN 158
Query: 123 INARGTYL 130
+N RGTYL
Sbjct: 159 VNTRGTYL 166
>pdb|3E03|A Chain A, Crystal Structure Of A Putative Dehydrogenase From
Xanthomonas Campestris
pdb|3E03|B Chain B, Crystal Structure Of A Putative Dehydrogenase From
Xanthomonas Campestris
pdb|3E03|C Chain C, Crystal Structure Of A Putative Dehydrogenase From
Xanthomonas Campestris
Length = 274
Score = 197 bits (501), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 97/192 (50%), Positives = 128/192 (66%), Gaps = 4/192 (2%)
Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
++++AV A VD FGGIDILVNNASAI L T +TP K++DL Q+NARG+++ +Q CLP+
Sbjct: 76 QVRAAVAATVDTFGGIDILVNNASAIWLRGTLDTPXKRFDLXQQVNARGSFVCAQACLPH 135
Query: 198 LKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPR 257
L ++ + HIL ++PP +LNP W+ H YT++K G S+ LG+A EF +A+NALWPR
Sbjct: 136 LLQAPNPHILTLAPPPSLNPAWWGAHTGYTLAKXGXSLVTLGLAAEFGPQGVAINALWPR 195
Query: 258 TAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFLIDDEVLKAQHI- 316
T I T AI L G A A R+PEI ADAA+ +L+ GQFLIDDEVL I
Sbjct: 196 TVIATDAINXLPGVDA---AACRRPEIXADAAHAVLTREAAGFHGQFLIDDEVLAQAGIT 252
Query: 317 DLEQYSYVPNGA 328
DL Y+ P A
Sbjct: 253 DLSGYAVDPQRA 264
Score = 121 bits (303), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 68/124 (54%), Positives = 83/124 (66%)
Query: 7 LSGLTIFITGASRXXXXXXXXXXXXXXXNIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
LSG T+FITGASR N+ IAAK+A +PKLPGTI+SAA V AGG
Sbjct: 4 LSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQ 63
Query: 67 CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINAR 126
L DIR+E V++AV A VD FGGIDILVNNASAI L T +TP K++DL Q+NAR
Sbjct: 64 GLALKCDIREEDQVRAAVAATVDTFGGIDILVNNASAIWLRGTLDTPXKRFDLXQQVNAR 123
Query: 127 GTYL 130
G+++
Sbjct: 124 GSFV 127
>pdb|3SC4|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase (A0qtm2
Homolog) Mycobacterium Thermoresistibile
pdb|3SC4|B Chain B, Crystal Structure Of A Short Chain Dehydrogenase (A0qtm2
Homolog) Mycobacterium Thermoresistibile
Length = 285
Score = 187 bits (476), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 93/181 (51%), Positives = 123/181 (67%), Gaps = 4/181 (2%)
Query: 147 VDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHI 206
V++FGGIDI VNNASAI+L PLK++DLMN I RGTY VSQ C+P++K ++ HI
Sbjct: 88 VEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHI 147
Query: 207 LNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPRTAIYTAAIE 266
L +SPP+ L P W + Y ++KYGM++CALG+AEE + IA N LWPRT + TAA++
Sbjct: 148 LTLSPPIRLEPKWLR-PTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVATAAVQ 206
Query: 267 MLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQ-FLIDDEVLKAQHIDLEQYSYVP 325
L GG +A A SRKPE+ ADAAY +L + P S TG L +D +L++ DL Y VP
Sbjct: 207 NLLGGD-EAMARSRKPEVYADAAYVVL-NKPSSYTGNTLLCEDVLLESGVTDLSVYDCVP 264
Query: 326 N 326
Sbjct: 265 G 265
Score = 134 bits (337), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 70/128 (54%), Positives = 85/128 (66%)
Query: 7 LSGLTIFITGASRXXXXXXXXXXXXXXXNIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
L G T+FI+G SR N+ + AK+AEPHPKLPGTIY+AAKE+E+AGG
Sbjct: 7 LRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQ 66
Query: 67 CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINAR 126
LP + DIRD AV +AV V++FGGIDI VNNASAI+L PLK++DLMN I R
Sbjct: 67 ALPIVGDIRDGDAVAAAVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVR 126
Query: 127 GTYLVKAS 134
GTY V S
Sbjct: 127 GTYAVSQS 134
>pdb|3OML|A Chain A, Structure Of Full-Length Peroxisomal Multifunctional
Enzyme Type 2 From Drosophila Melanogaster
Length = 613
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 7/150 (4%)
Query: 143 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSN 202
+ A+ FG +DILVNNA + T + ++L+N ++ +G++ +Q PY+KK N
Sbjct: 93 IETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQN 152
Query: 203 HAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPRTAIYT 262
+ I+ S N + V YT +K G+ A +A E +N+ N + P T
Sbjct: 153 YGRIIMTSS--NSGIYGNFGQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVP-----T 205
Query: 263 AAIEMLTGGSADAKATSRKPEIMADAAYYI 292
AA M G D KP+++A Y+
Sbjct: 206 AASRMTEGILPDILFNELKPKLIAPVVAYL 235
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 56/122 (45%), Gaps = 14/122 (11%)
Query: 59 EVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYD 118
E+ AGG + + D V + A+ FG +DILVNNA + T + ++
Sbjct: 71 EIRKAGGEAVADYNSVIDGAKV---IETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWN 127
Query: 119 LMNQINARGT---------YLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTA 169
L+N ++ +G+ Y+ K + G I ++ N+ + +G + A+ + L A
Sbjct: 128 LVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGI--YGNFGQVNYTAAKMGLIGLA 185
Query: 170 NT 171
NT
Sbjct: 186 NT 187
>pdb|2CFC|A Chain A, Structural Basis For Stereo Selectivity In The (R)- And
(S)- Hydroxypropylethane Thiosulfonate Dehydrogenases
pdb|2CFC|B Chain B, Structural Basis For Stereo Selectivity In The (R)- And
(S)- Hydroxypropylethane Thiosulfonate Dehydrogenases
pdb|2CFC|C Chain C, Structural Basis For Stereo Selectivity In The (R)- And
(S)- Hydroxypropylethane Thiosulfonate Dehydrogenases
pdb|2CFC|D Chain D, Structural Basis For Stereo Selectivity In The (R)- And
(S)- Hydroxypropylethane Thiosulfonate Dehydrogenases
Length = 250
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 86/172 (50%), Gaps = 17/172 (9%)
Query: 89 DKFGGIDILVNNASAISLTDTANTPLKKY-DLMNQINARGTYLVKASQGLEIQSAVNAAV 147
D+ +D+ SA +L +TA T Y D + ++ A A +G ++ +A+ A +
Sbjct: 27 DRVAALDL-----SAETLEETARTHWHAYADKVLRVRAD-----VADEG-DVNAAIAATM 75
Query: 148 DKFGGIDILVNNASAISLTDTA---NTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHA 204
++FG ID+LVNNA ++ TP++++D + +N RG +L + LP++
Sbjct: 76 EQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAG 135
Query: 205 HILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
I+NI+ +L F AYT SK + +A ++ G I NA+ P
Sbjct: 136 VIVNIASVASL--VAFPGRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCP 185
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 38/61 (62%), Gaps = 3/61 (4%)
Query: 73 DIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTA---NTPLKKYDLMNQINARGTY 129
D+ DE V +A+ A +++FG ID+LVNNA ++ TP++++D + +N RG +
Sbjct: 60 DVADEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIF 119
Query: 130 L 130
L
Sbjct: 120 L 120
>pdb|3GVC|A Chain A, Crystal Structure Of Probable Short-Chain Dehydrogenase-
Reductase From Mycobacterium Tuberculosis
pdb|3GVC|B Chain B, Crystal Structure Of Probable Short-Chain Dehydrogenase-
Reductase From Mycobacterium Tuberculosis
pdb|3GVC|C Chain C, Crystal Structure Of Probable Short-Chain Dehydrogenase-
Reductase From Mycobacterium Tuberculosis
pdb|3GVC|D Chain D, Crystal Structure Of Probable Short-Chain Dehydrogenase-
Reductase From Mycobacterium Tuberculosis
Length = 277
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 82/183 (44%), Gaps = 14/183 (7%)
Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
+I + V+A V FGG+D LV NA + L +T ++ +D + IN RG +L ++ P
Sbjct: 89 QIIAMVDACVAAFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPR 148
Query: 198 LKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPR 257
+ + I+N+S AY +SK G+ + A E + I N L P
Sbjct: 149 MIERGGGAIVNLSSL--AGQVAVGGTGAYGMSKAGIIQLSRITAAELRSSGIRSNTLLPA 206
Query: 258 ---TAIYTAAIEMLTG--GSADAKATSRK-------PEIMADAAYYILSSNPPSLTGQFL 305
T + A+ M G G+ A++ + PE MA ++LS + +TG
Sbjct: 207 FVDTPMQQTAMAMFDGALGAGGARSMIARLQGRMAAPEEMAGIVVFLLSDDASMITGTTQ 266
Query: 306 IDD 308
I D
Sbjct: 267 IAD 269
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 36/61 (59%)
Query: 70 CIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTY 129
C VD+ DE + + V+A V FGG+D LV NA + L +T ++ +D + IN RG +
Sbjct: 80 CRVDVSDEQQIIAMVDACVAAFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAW 139
Query: 130 L 130
L
Sbjct: 140 L 140
>pdb|3TFO|A Chain A, Crystal Structure Of A Putative
3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From
Sinorhizobium Meliloti
pdb|3TFO|B Chain B, Crystal Structure Of A Putative
3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From
Sinorhizobium Meliloti
pdb|3TFO|C Chain C, Crystal Structure Of A Putative
3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From
Sinorhizobium Meliloti
pdb|3TFO|D Chain D, Crystal Structure Of A Putative
3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From
Sinorhizobium Meliloti
Length = 264
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 46/75 (61%)
Query: 53 IYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANT 112
I + A E+ DAGG L ++D+ D H+V + AAVD +G ID+LVNNA + L+ A
Sbjct: 41 IEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGRIDVLVNNAGVMPLSPLAAV 100
Query: 113 PLKKYDLMNQINARG 127
+ +++ M +N +G
Sbjct: 101 KVDEWERMIDVNIKG 115
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 54/115 (46%), Gaps = 8/115 (6%)
Query: 144 NAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNH 203
AAVD +G ID+LVNNA + L+ A + +++ M +N +G LP ++
Sbjct: 73 QAAVDTWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRS 132
Query: 204 AHILNISP--PLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
I+NI L++ P Y +K+ + + G+ +E NI V + P
Sbjct: 133 GQIINIGSIGALSVVP----TAAVYCATKFAVRAISDGLRQE--STNIRVTCVNP 181
>pdb|1WMB|A Chain A, Crystal Structure Of Nad Dependent D-3-Hydroxybutylate
Dehydrogenase
pdb|1WMB|B Chain B, Crystal Structure Of Nad Dependent D-3-Hydroxybutylate
Dehydrogenase
pdb|1X1T|A Chain A, Crystal Structure Of D-3-hydroxybutyrate Dehydrogenase
From Pseudomonas Fragi Complexed With Nad+
pdb|2ZTL|A Chain A, Closed Conformation Of D-3-Hydroxybutyrate Dehydrogenase
Complexed With Nad+ And L-3-Hydroxybutyrate
pdb|2ZTL|B Chain B, Closed Conformation Of D-3-Hydroxybutyrate Dehydrogenase
Complexed With Nad+ And L-3-Hydroxybutyrate
pdb|2ZTL|C Chain C, Closed Conformation Of D-3-Hydroxybutyrate Dehydrogenase
Complexed With Nad+ And L-3-Hydroxybutyrate
pdb|2ZTL|D Chain D, Closed Conformation Of D-3-Hydroxybutyrate Dehydrogenase
Complexed With Nad+ And L-3-Hydroxybutyrate
pdb|2ZTV|A Chain A, The Binary Complex Of D-3-Hydroxybutyrate Dehydrogenase
With Nad+
pdb|2ZTV|B Chain B, The Binary Complex Of D-3-Hydroxybutyrate Dehydrogenase
With Nad+
pdb|2ZTV|C Chain C, The Binary Complex Of D-3-Hydroxybutyrate Dehydrogenase
With Nad+
pdb|2ZTV|D Chain D, The Binary Complex Of D-3-Hydroxybutyrate Dehydrogenase
With Nad+
Length = 260
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 81/180 (45%), Gaps = 16/180 (8%)
Query: 134 SQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQK 193
S+G ++ V+ AV + G IDILVNNA + P +K+D + +N + +
Sbjct: 65 SKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAA 124
Query: 194 CLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNA 253
LP++KK I+NI+ L N AY +K+G+ A E G I NA
Sbjct: 125 ALPHMKKQGFGRIINIASAHGLVA--SANKSAYVAAKHGVVGFTKVTALETAGQGITANA 182
Query: 254 L---WPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFLIDDEV 310
+ W RT + I L A+ ++ AA +LS PSL QF+ +++
Sbjct: 183 ICPGWVRTPLVEKQISAL----AEKNGVDQET-----AARELLSEKQPSL--QFVTPEQL 231
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 28/52 (53%)
Query: 73 DIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQIN 124
D+ AV+ V+ AV + G IDILVNNA + P +K+D + +N
Sbjct: 63 DLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALN 114
>pdb|2ZTM|A Chain A, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase
pdb|2ZTM|B Chain B, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase
pdb|2ZTM|C Chain C, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase
pdb|2ZTM|D Chain D, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase
Length = 260
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 81/180 (45%), Gaps = 16/180 (8%)
Query: 134 SQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQK 193
S+G ++ V+ AV + G IDILVNNA + P +K+D + +N + +
Sbjct: 65 SKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAA 124
Query: 194 CLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNA 253
LP++KK I+NI+ L N AY +K+G+ A E G I NA
Sbjct: 125 ALPHMKKQGFGRIINIASAHGLVA--SANKSAYVAAKHGVVGFTKVTALETAGQGITANA 182
Query: 254 L---WPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFLIDDEV 310
+ W R+ + I L A+ ++ AA +LS PSL QF+ +++
Sbjct: 183 ICPGWVRSPLVEKQISAL----AEKNGVDQET-----AARELLSEKQPSL--QFVTPEQL 231
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 28/52 (53%)
Query: 73 DIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQIN 124
D+ AV+ V+ AV + G IDILVNNA + P +K+D + +N
Sbjct: 63 DLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALN 114
>pdb|1QND|A Chain A, Sterol Carrier Protein-2, Nmr, 20 Structures
Length = 123
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 327 GAAEGSWHIDLKTXXXXXXXXXXXXTVDATLTMTEKNFIALFEGKLKPTSAFMTGKLKIS 386
G E +W +D+K D T+TM + +F+AL GK+ P SAF GKLKI+
Sbjct: 44 GGKEATWVVDVKNGKGSVLPNSDK-KADCTITMADSDFLALMTGKMNPQSAFFQGKLKIT 102
Query: 387 GNLQKAMKLEKL 398
GN+ AMKL+ L
Sbjct: 103 GNMGLAMKLQNL 114
>pdb|2C0L|B Chain B, Tpr Domain Of Human Pex5p In Complex With Human Mscp2
Length = 122
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 327 GAAEGSWHIDLKTXXXXXXXXXXXXTVDATLTMTEKNFIALFEGKLKPTSAFMTGKLKIS 386
G E +W +D+K D T+TM + +F+AL GK+ P SAF GKLKI+
Sbjct: 43 GGKEATWVVDVKNGKGSVLPNSDK-KADCTITMADSDFLALMTGKMNPQSAFFQGKLKIT 101
Query: 387 GNLQKAMKLEKL 398
GN+ AMKL+ L
Sbjct: 102 GNMGLAMKLQNL 113
>pdb|2ZTU|A Chain A, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase
Complexed With Nad+
pdb|2ZTU|B Chain B, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase
Complexed With Nad+
pdb|2ZTU|C Chain C, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase
Complexed With Nad+
pdb|2ZTU|D Chain D, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase
Complexed With Nad+
Length = 260
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 80/180 (44%), Gaps = 16/180 (8%)
Query: 134 SQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQK 193
S+G ++ V+ AV + G IDILVNNA + P +K+D + +N + +
Sbjct: 65 SKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAA 124
Query: 194 CLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNA 253
LP++KK I+NI+ L N AY +K+G+ A E G I NA
Sbjct: 125 ALPHMKKQGFGRIINIASAHGLVA--SANKSAYVAAKHGVVGFTKVTALETAGQGITANA 182
Query: 254 L---WPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFLIDDEV 310
+ W R + I L A+ ++ AA +LS PSL QF+ +++
Sbjct: 183 ICPGWVRAPLVEKQISAL----AEKNGVDQET-----AARELLSEKQPSL--QFVTPEQL 231
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 28/52 (53%)
Query: 73 DIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQIN 124
D+ AV+ V+ AV + G IDILVNNA + P +K+D + +N
Sbjct: 63 DLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALN 114
>pdb|3PGX|A Chain A, Crystal Structure Of A Putative Carveol Dehydrogenase From
Mycobacterium Paratuberculosis Bound To Nicotinamide
Adenine Dinucleotide
pdb|3PGX|B Chain B, Crystal Structure Of A Putative Carveol Dehydrogenase From
Mycobacterium Paratuberculosis Bound To Nicotinamide
Adenine Dinucleotide
pdb|3PGX|C Chain C, Crystal Structure Of A Putative Carveol Dehydrogenase From
Mycobacterium Paratuberculosis Bound To Nicotinamide
Adenine Dinucleotide
pdb|3PGX|D Chain D, Crystal Structure Of A Putative Carveol Dehydrogenase From
Mycobacterium Paratuberculosis Bound To Nicotinamide
Adenine Dinucleotide
Length = 280
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 75/165 (45%), Gaps = 15/165 (9%)
Query: 5 GKLSGLTIFITGASRXXXXXXXXXXXXXXXNIVIAAKTAEP-------HPKLPGTIYSAA 57
G L G FITGA+R +I IA P P P + A
Sbjct: 11 GSLQGRVAFITGAARGQGRSHAVRLAAEGADI-IACDICAPVSASVTYAPASPEDLDETA 69
Query: 58 KEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKY 117
+ VED G L ++D+RD+ A++ V +++FG +D++V NA +S +++
Sbjct: 70 RLVEDQGRKALTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQW 129
Query: 118 DLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASA 162
D + +N GT+ +++ V A ++ G I+V ++SA
Sbjct: 130 DTVIGVNLTGTWRT-------LRATVPAMIEAGNGGSIVVVSSSA 167
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 61/129 (47%), Gaps = 4/129 (3%)
Query: 139 IQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLP-Y 197
++ V +++FG +D++V NA +S +++D + +N GT+ + +P
Sbjct: 92 LRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAM 151
Query: 198 LKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPR 257
++ N I+ +S L H Y+ SK+G++ +A E I VN++ P
Sbjct: 152 IEAGNGGSIVVVSSSAGLKATPGNGH--YSASKHGLTALTNTLAIELGEYGIRVNSIHPY 209
Query: 258 TAIYTAAIE 266
+ + T IE
Sbjct: 210 S-VETPMIE 217
>pdb|3V2H|A Chain A, The Crystal Structure Of D-Beta-Hydroxybutyrate
Dehydrogenase From Sinorhizobium Meliloti
pdb|3V2H|B Chain B, The Crystal Structure Of D-Beta-Hydroxybutyrate
Dehydrogenase From Sinorhizobium Meliloti
Length = 281
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 57/119 (47%), Gaps = 2/119 (1%)
Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
EI D+FGG DILVNNA + + P++++D + +N ++ + +P
Sbjct: 90 EIADXXAXVADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPP 149
Query: 198 LKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
KK I+NI+ L FK+ AY +K+G+ +A E + VN++ P
Sbjct: 150 XKKKGWGRIINIASAHGLVASPFKS--AYVAAKHGIXGLTKTVALEVAESGVTVNSICP 206
Score = 35.0 bits (79), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 25/41 (60%)
Query: 89 DKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTY 129
D+FGG DILVNNA + + P++++D + +N ++
Sbjct: 100 DRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSF 140
>pdb|1VL8|A Chain A, Crystal Structure Of Gluconate 5-dehydrogenase (tm0441)
From Thermotoga Maritima At 2.07 A Resolution
pdb|1VL8|B Chain B, Crystal Structure Of Gluconate 5-dehydrogenase (tm0441)
From Thermotoga Maritima At 2.07 A Resolution
Length = 267
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 79/181 (43%), Gaps = 14/181 (7%)
Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
E++ + A +KFG +D +VN A PL ++ + ++N GTY V ++
Sbjct: 85 EVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSL 144
Query: 198 LKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNAL--- 254
L++S++ I+NI L + N AY SK G++ +A+E+ I VN +
Sbjct: 145 LRESDNPSIINIG-SLTVEEVTMPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPG 203
Query: 255 WPRTAIYTAAIE-------MLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFLID 307
W RT + A ML + PE + A ++ S +TGQ +
Sbjct: 204 WYRTKMTEAVFSDPEKLDYML---KRIPLGRTGVPEDLKGVAVFLASEEAKYVTGQIIFV 260
Query: 308 D 308
D
Sbjct: 261 D 261
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 51/125 (40%), Gaps = 6/125 (4%)
Query: 7 LSGLTIFITGASRXXXXXXXXXXXXXXXNIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
L G +TG SR ++V+A++ E + +A K E G
Sbjct: 19 LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASE------AAQKLTEKYGVE 72
Query: 67 CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINAR 126
+ D+ + V+ + A +KFG +D +VN A PL ++ + ++N
Sbjct: 73 TMAFRCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLF 132
Query: 127 GTYLV 131
GTY V
Sbjct: 133 GTYYV 137
>pdb|3AK4|A Chain A, Crystal Structure Of Nadh-Dependent Quinuclidinone
Reductase From Agrobacterium Tumefaciens
pdb|3AK4|B Chain B, Crystal Structure Of Nadh-Dependent Quinuclidinone
Reductase From Agrobacterium Tumefaciens
pdb|3AK4|C Chain C, Crystal Structure Of Nadh-Dependent Quinuclidinone
Reductase From Agrobacterium Tumefaciens
pdb|3AK4|D Chain D, Crystal Structure Of Nadh-Dependent Quinuclidinone
Reductase From Agrobacterium Tumefaciens
Length = 263
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 83/197 (42%), Gaps = 33/197 (16%)
Query: 131 VKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLV 190
V ++ + +A+ A+D GG D+L NA ++ + +++D +NARG +L
Sbjct: 65 VDVTKRASVDAAMQKAIDALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLA 124
Query: 191 SQ-KCLPYLKKSNHAHILN-------ISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAE 242
+Q C +L + I+N + PL + Y+ SK+ + +A
Sbjct: 125 NQIACRHFLASNTKGVIVNTASLAAKVGAPLLAH---------YSASKFAVFGWTQALAR 175
Query: 243 EFKGDNIAVNALWP---------RTAIYTAAIEMLTGGSADAKATS-------RKPEIMA 286
E NI VN + P R I+ A + +T + A+ S +PE +A
Sbjct: 176 EMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGRIEEPEDVA 235
Query: 287 DAAYYILSSNPPSLTGQ 303
D ++ S +TGQ
Sbjct: 236 DVVVFLASDAARFMTGQ 252
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 32/59 (54%)
Query: 72 VDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYL 130
VD+ +V +A+ A+D GG D+L NA ++ + +++D +NARG +L
Sbjct: 65 VDVTKRASVDAAMQKAIDALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFL 123
>pdb|1C44|A Chain A, Sterol Carrier Protein 2 (Scp2) From Rabbit
Length = 123
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 327 GAAEGSWHIDLKTXXXXXXXXXXXXTVDATLTMTEKNFIALFEGKLKPTSAFMTGKLKIS 386
G E +W +D+K D T+TM + + +AL GK+ P SAF GKLKI+
Sbjct: 44 GGKEATWVVDVKNGKGSVLPNSDK-KADCTITMADSDLLALMTGKMNPQSAFFQGKLKIT 102
Query: 387 GNLQKAMKLEKL 398
GN+ AMKL+ L
Sbjct: 103 GNMGLAMKLQNL 114
>pdb|3U5T|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein]
Reductase From Sinorhizobium Meliloti
pdb|3U5T|B Chain B, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein]
Reductase From Sinorhizobium Meliloti
pdb|3U5T|C Chain C, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein]
Reductase From Sinorhizobium Meliloti
pdb|3U5T|D Chain D, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein]
Reductase From Sinorhizobium Meliloti
Length = 267
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 59/131 (45%), Gaps = 12/131 (9%)
Query: 13 FITGASRXXXXXXXXXXXXXXXNIVI--AAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPC 70
+TGASR +VI A K A A ++E AGG L
Sbjct: 31 IVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAE--------EVAGKIEAAGGKALTA 82
Query: 71 IVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTY- 129
D+ D AV+ A + FGG+D+LVNNA LT A T +D + +N +GT+
Sbjct: 83 QADVSDPAAVRRLFATAEEAFGGVDVLVNNAGIXPLTTIAETGDAVFDRVIAVNLKGTFN 142
Query: 130 -LVKASQGLEI 139
L +A+Q L +
Sbjct: 143 TLREAAQRLRV 153
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 55/111 (49%), Gaps = 4/111 (3%)
Query: 146 AVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAH 205
A + FGG+D+LVNNA LT A T +D + +N +GT+ ++ L+
Sbjct: 99 AEEAFGGVDVLVNNAGIXPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRII 158
Query: 206 ILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
+ S L+P ++ Y +K G+ +++E +G +I VNA+ P
Sbjct: 159 NXSTSQVGLLHP----SYGIYAAAKAGVEAXTHVLSKELRGRDITVNAVAP 205
>pdb|4DQX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From
Rhizobium Etli Cfn 42
pdb|4DQX|B Chain B, Crystal Structure Of A Short Chain Dehydrogenase From
Rhizobium Etli Cfn 42
pdb|4DQX|C Chain C, Crystal Structure Of A Short Chain Dehydrogenase From
Rhizobium Etli Cfn 42
pdb|4DQX|D Chain D, Crystal Structure Of A Short Chain Dehydrogenase From
Rhizobium Etli Cfn 42
Length = 277
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 59/128 (46%), Gaps = 2/128 (1%)
Query: 131 VKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLV 190
V S + +S V K+G +D+LVNNA + + P + +D + +N +G +L
Sbjct: 80 VDVSSAKDAESXVEKTTAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIXSVNVKGIFLC 139
Query: 191 SQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIA 250
S+ +P +++ I+N + + + AY SK +S A + + I
Sbjct: 140 SKYVIPVXRRNGGGSIINTTSYTATSA--IADRTAYVASKGAISSLTRAXAXDHAKEGIR 197
Query: 251 VNALWPRT 258
VNA+ P T
Sbjct: 198 VNAVAPGT 205
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 35/76 (46%)
Query: 55 SAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPL 114
+A + + G VD+ +S V K+G +D+LVNNA + + P
Sbjct: 63 AAVRVANEIGSKAFGVRVDVSSAKDAESXVEKTTAKWGRVDVLVNNAGFGTTGNVVTIPE 122
Query: 115 KKYDLMNQINARGTYL 130
+ +D + +N +G +L
Sbjct: 123 ETWDRIXSVNVKGIFL 138
>pdb|2YZ7|A Chain A, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From
Alcaligenes Faecalis
pdb|2YZ7|B Chain B, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From
Alcaligenes Faecalis
pdb|2YZ7|C Chain C, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From
Alcaligenes Faecalis
pdb|2YZ7|D Chain D, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From
Alcaligenes Faecalis
pdb|2YZ7|E Chain E, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From
Alcaligenes Faecalis
pdb|2YZ7|F Chain F, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From
Alcaligenes Faecalis
pdb|2YZ7|G Chain G, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From
Alcaligenes Faecalis
pdb|2YZ7|H Chain H, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From
Alcaligenes Faecalis
pdb|3VDR|A Chain A, Crystal Structure Of D-3-Hydroxybutyrate Dehydrogenase,
Prepared In The Presence Of The Substrate
D-3-Hydroxybutyrate And Nad(+)
pdb|3VDR|B Chain B, Crystal Structure Of D-3-Hydroxybutyrate Dehydrogenase,
Prepared In The Presence Of The Substrate
D-3-Hydroxybutyrate And Nad(+)
pdb|3VDR|C Chain C, Crystal Structure Of D-3-Hydroxybutyrate Dehydrogenase,
Prepared In The Presence Of The Substrate
D-3-Hydroxybutyrate And Nad(+)
pdb|3VDR|D Chain D, Crystal Structure Of D-3-Hydroxybutyrate Dehydrogenase,
Prepared In The Presence Of The Substrate
D-3-Hydroxybutyrate And Nad(+)
pdb|3VDQ|A Chain A, Crystal Structure Of Alcaligenes Faecalis
D-3-Hydroxybutyrate Dehydrogenase In Complex With Nad(+)
And Acetate
pdb|3VDQ|B Chain B, Crystal Structure Of Alcaligenes Faecalis
D-3-Hydroxybutyrate Dehydrogenase In Complex With Nad(+)
And Acetate
pdb|3VDQ|C Chain C, Crystal Structure Of Alcaligenes Faecalis
D-3-Hydroxybutyrate Dehydrogenase In Complex With Nad(+)
And Acetate
pdb|3VDQ|D Chain D, Crystal Structure Of Alcaligenes Faecalis
D-3-Hydroxybutyrate Dehydrogenase In Complex With Nad(+)
And Acetate
Length = 260
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 75/177 (42%), Gaps = 19/177 (10%)
Query: 146 AVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAH 205
A + GG+DILVNNA P+ K++ + +N + + LP ++K
Sbjct: 77 AAEALGGLDILVNNAGIQHTAPIEEFPVDKWNAIIALNLSAVFHGTAAALPIMQKQGWGR 136
Query: 206 ILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNAL---WPRTAIYT 262
I+NI+ L N AY +K+G+ A E G I NA+ W RT +
Sbjct: 137 IINIASAHGLVA--SVNKSAYVAAKHGVVGLTKVTALENAGKGITCNAICPGWVRTPLVE 194
Query: 263 AAIEMLTGGSA-DAKATSRK-------------PEIMADAAYYILSSNPPSLTGQFL 305
IE ++ D +A +R+ PE + AA ++ S+ +TG L
Sbjct: 195 KQIEAISQQKGIDIEAAARELLAEKQPSLQFVTPEQLGGAAVFLSSAAADQMTGTTL 251
>pdb|3R1I|A Chain A, Crystal Structure Of A Short-Chain Type
DehydrogenaseREDUCTASE FROM Mycobacterium Marinum
pdb|3R1I|B Chain B, Crystal Structure Of A Short-Chain Type
DehydrogenaseREDUCTASE FROM Mycobacterium Marinum
Length = 276
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 61/147 (41%), Gaps = 15/147 (10%)
Query: 7 LSGLTIFITGASRXXXXXXXXXXXXXXXNIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
LSG ITGAS + +AA+ ++ + A E+ GG
Sbjct: 30 LSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSD-------ALQVVADEIAGVGGK 82
Query: 67 CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINAR 126
LP D+ V+ ++ + GGIDI V NA +S+ + PL+++ + N
Sbjct: 83 ALPIRCDVTQPDQVRGMLDQMTGELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVT 142
Query: 127 GTYLVKASQGLEIQSAVNAAVDK-FGG 152
G +L Q+A A VD+ GG
Sbjct: 143 GVFLTA-------QAAARAMVDQGLGG 162
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 52/130 (40%), Gaps = 21/130 (16%)
Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
+++ ++ + GGIDI V NA +S+ + PL+++ + N G +L +Q
Sbjct: 95 QVRGMLDQMTGELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARA 154
Query: 198 L-----------KKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKG 246
+ S HI+NI ++ Y SK + MA E
Sbjct: 155 MVDQGLGGTIITTASMSGHIINIPQQVS----------HYCTSKAAVVHLTKAMAVELAP 204
Query: 247 DNIAVNALWP 256
I VN++ P
Sbjct: 205 HQIRVNSVSP 214
>pdb|1ZBQ|A Chain A, Crystal Structure Of Human 17-beta-hydroxysteroid
Dehydrogenase Type 4 In Complex With Nad
pdb|1ZBQ|B Chain B, Crystal Structure Of Human 17-beta-hydroxysteroid
Dehydrogenase Type 4 In Complex With Nad
pdb|1ZBQ|C Chain C, Crystal Structure Of Human 17-beta-hydroxysteroid
Dehydrogenase Type 4 In Complex With Nad
pdb|1ZBQ|D Chain D, Crystal Structure Of Human 17-beta-hydroxysteroid
Dehydrogenase Type 4 In Complex With Nad
pdb|1ZBQ|E Chain E, Crystal Structure Of Human 17-beta-hydroxysteroid
Dehydrogenase Type 4 In Complex With Nad
pdb|1ZBQ|F Chain F, Crystal Structure Of Human 17-beta-hydroxysteroid
Dehydrogenase Type 4 In Complex With Nad
Length = 327
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 68/139 (48%), Gaps = 3/139 (2%)
Query: 119 LMNQINARGTYLVKASQGLEI-QSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYD 177
++ +I RG V +E + V A+D FG ID++VNNA + A + +D
Sbjct: 79 VVEEIRRRGGKAVANYDSVEEGEKVVKTALDAFGRIDVVVNNAGILRDRSFARISDEDWD 138
Query: 178 LMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCA 237
++++++ RG++ V++ ++KK + I+ S + + Y+ +K G+ A
Sbjct: 139 IIHRVHLRGSFQVTRAAWEHMKKQKYGRIIMTSSASGI--YGNFGQANYSAAKLGLLGLA 196
Query: 238 LGMAEEFKGDNIAVNALWP 256
+A E + NI N + P
Sbjct: 197 NSLAIEGRKSNIHCNTIAP 215
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 58 KEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKY 117
+E+ GG + + + V V A+D FG ID++VNNA + A + +
Sbjct: 81 EEIRRRGGKAVANYDSVEEGEKV---VKTALDAFGRIDVVVNNAGILRDRSFARISDEDW 137
Query: 118 DLMNQINARGTYLV 131
D++++++ RG++ V
Sbjct: 138 DIIHRVHLRGSFQV 151
>pdb|2ET6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candida
Tropicalis Peroxisomal Multifunctional Enzyme Type 2
Length = 604
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 59/118 (50%), Gaps = 2/118 (1%)
Query: 140 QSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLK 199
++ + +DK+G IDILVNNA + A +++D + Q++ GT+ +S+ PY
Sbjct: 383 EAIIKNVIDKYGTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFV 442
Query: 200 KSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPR 257
+ I+NI+ + + Y+ SK G+ + MA E +NI VN + P
Sbjct: 443 EKQFGRIINITSTSGI--YGNFGQANYSSSKAGILGLSKTMAIEGAKNNIKVNIVAPH 498
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 66/163 (40%), Gaps = 8/163 (4%)
Query: 143 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSN 202
V AV FG + +++NNA + K Y L+ ++ G + V++ PY +K
Sbjct: 82 VETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQK 141
Query: 203 HAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPRTAIYT 262
+ I+N S P L + Y +K + A +A+E NI NA+ P
Sbjct: 142 YGRIVNTSSPAGL--YGNFGQANYASAKSALLGFAETLAKEGAKYNIKANAIAP-----L 194
Query: 263 AAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFL 305
A M PE +A Y LSS LTGQF
Sbjct: 195 ARSRMTESIMPPPMLEKLGPEKVAPLVLY-LSSAENELTGQFF 236
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 59 EVEDAGGNCLPCIVDI-RDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKY 117
E++ AGG P D+ +D A+ + +DK+G IDILVNNA + A +++
Sbjct: 363 EIKAAGGEAWPDQHDVAKDSEAI---IKNVIDKYGTIDILVNNAGILRDRSFAKMSKQEW 419
Query: 118 DLMNQINARGTY 129
D + Q++ GT+
Sbjct: 420 DSVQQVHLIGTF 431
>pdb|3CXR|A Chain A, Crystal Structure Of Gluconate 5-Dehydrogase From
Streptococcus Suis Type 2
pdb|3O03|A Chain A, Quaternary Complex Structure Of Gluconate 5-Dehydrogenase
From Streptococcus Suis Type 2
Length = 291
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 60/134 (44%), Gaps = 3/134 (2%)
Query: 123 INARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQI 182
INA G Y+ + IQ+ V + G IDILVNNA I ++ + I
Sbjct: 83 INAHG-YVCDVTDEDGIQAMVAQIESEVGIIDILVNNAGIIRRVPMIEMTAAQFRQVIDI 141
Query: 183 NARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAE 242
+ ++VS+ +P + K H I+NI ++ + AY +K G+ M +A
Sbjct: 142 DLNAPFIVSKAVIPSMIKKGHGKIINICS--MMSELGRETVSAYAAAKGGLKMLTKNIAS 199
Query: 243 EFKGDNIAVNALWP 256
E+ NI N + P
Sbjct: 200 EYGEANIQCNGIGP 213
Score = 32.0 bits (71), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 23/42 (54%)
Query: 63 AGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAI 104
AG N + D+ DE +Q+ V + G IDILVNNA I
Sbjct: 81 AGINAHGYVCDVTDEDGIQAMVAQIESEVGIIDILVNNAGII 122
>pdb|1GZ6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat
Peroxisomal Multifunctional Enzyme Type 2
pdb|1GZ6|B Chain B, (3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat
Peroxisomal Multifunctional Enzyme Type 2
pdb|1GZ6|C Chain C, (3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat
Peroxisomal Multifunctional Enzyme Type 2
pdb|1GZ6|D Chain D, (3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat
Peroxisomal Multifunctional Enzyme Type 2
Length = 319
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 67/139 (48%), Gaps = 3/139 (2%)
Query: 119 LMNQINARGTYLVKASQGLEI-QSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYD 177
++ +I RG V +E + V A+D FG ID++VNNA + + + +D
Sbjct: 58 VVEEIRRRGGKAVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWD 117
Query: 178 LMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCA 237
++ +++ RG++ V++ + KK N+ I+ + + + Y+ +K G+ A
Sbjct: 118 IIQRVHLRGSFQVTRAAWDHXKKQNYGRIIXTASASGI--YGNFGQANYSAAKLGLLGLA 175
Query: 238 LGMAEEFKGDNIAVNALWP 256
+ E + +NI N + P
Sbjct: 176 NTLVIEGRKNNIHCNTIAP 194
Score = 36.6 bits (83), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 31/54 (57%)
Query: 78 HAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLV 131
A + V A+D FG ID++VNNA + + + +D++ +++ RG++ V
Sbjct: 77 EAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQV 130
>pdb|3V2G|A Chain A, Crystal Structure Of A DehydrogenaseREDUCTASE FROM
SINORHIZOBIUM Meliloti 1021
Length = 271
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 52/124 (41%), Gaps = 6/124 (4%)
Query: 7 LSGLTIFITGASRXXXXXXXXXXXXXXXNIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
L+G T F+TG SR + + A + + E+E AGG
Sbjct: 29 LAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQ------AVVSEIEQAGGR 82
Query: 67 CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINAR 126
+ D RD A++ A+ V+ GG+DILVN+A T + +D + +N R
Sbjct: 83 AVAIRADNRDAEAIEQAIRETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVXAVNFR 142
Query: 127 GTYL 130
++
Sbjct: 143 APFV 146
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 52/119 (43%), Gaps = 5/119 (4%)
Query: 139 IQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYL 198
I+ A+ V+ GG+DILVN+A T + +D + +N R ++ + +L
Sbjct: 96 IEQAIRETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVXAVNFRAPFVAIRSASRHL 155
Query: 199 KKSNHAHILNISPPL-NLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
+ I+ I L L P + Y+ SK ++ G+A + I VN + P
Sbjct: 156 --GDGGRIITIGSNLAELVP--WPGISLYSASKAALAGLTKGLARDLGPRGITVNIVHP 210
>pdb|4FC6|A Chain A, Studies On Dcr Shed New Light On Peroxisomal
Beta-Oxidation: Crystal Structure Of The Ternary Complex
Of Pdcr
pdb|4FC6|B Chain B, Studies On Dcr Shed New Light On Peroxisomal
Beta-Oxidation: Crystal Structure Of The Ternary Complex
Of Pdcr
pdb|4FC6|C Chain C, Studies On Dcr Shed New Light On Peroxisomal
Beta-Oxidation: Crystal Structure Of The Ternary Complex
Of Pdcr
pdb|4FC6|D Chain D, Studies On Dcr Shed New Light On Peroxisomal
Beta-Oxidation: Crystal Structure Of The Ternary Complex
Of Pdcr
pdb|4FC7|A Chain A, Studies On Dcr Shed New Light On Peroxisomal
Beta-Oxidation: Crystal Structure Of The Ternary Complex
Of Pdcr
pdb|4FC7|B Chain B, Studies On Dcr Shed New Light On Peroxisomal
Beta-Oxidation: Crystal Structure Of The Ternary Complex
Of Pdcr
pdb|4FC7|C Chain C, Studies On Dcr Shed New Light On Peroxisomal
Beta-Oxidation: Crystal Structure Of The Ternary Complex
Of Pdcr
pdb|4FC7|D Chain D, Studies On Dcr Shed New Light On Peroxisomal
Beta-Oxidation: Crystal Structure Of The Ternary Complex
Of Pdcr
Length = 277
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 52/117 (44%), Gaps = 6/117 (5%)
Query: 13 FITGASRXXXXXXXXXXXXXXXNIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIV 72
FITG + VIA+++ LP + +A K G CLP +
Sbjct: 31 FITGGGSGIGFRIAEIFMRHGCHTVIASRS------LPRVLTAARKLAGATGRRCLPLSM 84
Query: 73 DIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTY 129
D+R AV +AV+ A+ +FG IDIL+N A+ L + + I+ GT+
Sbjct: 85 DVRAPPAVMAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTF 141
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 75/179 (41%), Gaps = 12/179 (6%)
Query: 139 IQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYL 198
+ +AV+ A+ +FG IDIL+N A+ L + + I+ GT+ VS+
Sbjct: 92 VMAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKF 151
Query: 199 KKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPRT 258
+ + I+NI+ L + H +K + +A E+ NI VN+L P
Sbjct: 152 FRDHGGVIVNITATLGNRGQALQVHAGS--AKAAVDAMTRHLAVEWGPQNIRVNSLAPGP 209
Query: 259 AIYTAAIEMLTG--GSADAKATS-------RKPEIMADAAYYILSSNPPSLTGQFLIDD 308
T + L G S K T+ K EI A + Y+ S +TG L+ D
Sbjct: 210 ISGTEGLRRLGGPQASLSTKVTASPLQRLGNKTEI-AHSVLYLASPLASYVTGAVLVAD 267
>pdb|3VTZ|A Chain A, Structure Of Thermoplasma Volcanium Aldohexose
Dehydrogenase
pdb|3VTZ|B Chain B, Structure Of Thermoplasma Volcanium Aldohexose
Dehydrogenase
pdb|3VTZ|C Chain C, Structure Of Thermoplasma Volcanium Aldohexose
Dehydrogenase
pdb|3VTZ|D Chain D, Structure Of Thermoplasma Volcanium Aldohexose
Dehydrogenase
Length = 269
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 76/181 (41%), Gaps = 29/181 (16%)
Query: 149 KFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILN 208
K+G IDILVNNA + TP + + + +N G+YL+++ +P + H I+N
Sbjct: 78 KYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIIN 137
Query: 209 ISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGD---NIAVNALWP---RTAIYT 262
I+ + KN AY SK+ + LG+ D I NA+ P T +
Sbjct: 138 IASVQSYAA--TKNAAAYVTSKHAL----LGLTRSVAIDYAPKIRCNAVCPGTIMTPMVI 191
Query: 263 AAIEMLTGGSADAKATSRK---------------PEIMADAAYYILSSNPPSLTGQFLID 307
A +M G D A RK PE +A+ ++ S +TG L
Sbjct: 192 KAAKMEVG--EDENAVERKIEEWGRQHPMGRIGRPEEVAEVVAFLASDRSSFITGACLTV 249
Query: 308 D 308
D
Sbjct: 250 D 250
Score = 32.0 bits (71), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%)
Query: 72 VDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLV 131
+D+ +E V+ AV K+G IDILVNNA + TP + + + +N G+YL+
Sbjct: 60 IDVTNEEEVKEAVEKTTKKYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLM 119
>pdb|2EHD|A Chain A, Crystal Structure Analysis Of Oxidoreductase
pdb|2EHD|B Chain B, Crystal Structure Analysis Of Oxidoreductase
Length = 234
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 66/153 (43%), Gaps = 8/153 (5%)
Query: 142 AVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKS 201
AV A + FG + LVNNA + L+++ L+ N G +L + +P L +
Sbjct: 68 AVAAMEEAFGELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRR 127
Query: 202 NHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPRTAIY 261
I+N+ NP FK AY SK+G+ A + + N+ V + P
Sbjct: 128 GGGTIVNVGSLAGKNP--FKGGAAYNASKFGLLGLAGAAMLDLREANVRVVNVLP----- 180
Query: 262 TAAIEMLTGGSADAKATSRKPEIMADAAYYILS 294
+++ G+ +A KPE +A A + L
Sbjct: 181 -GSVDTGFAGNTPGQAWKLKPEDVAQAVLFALE 212
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 58/141 (41%), Gaps = 18/141 (12%)
Query: 12 IFITGASRXXXXXXXXXXXXXXXNIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCI 71
+ ITGASR + + A+ + + + A E+E A LP
Sbjct: 8 VLITGASRGIGEATARLLHAKGYRVGLMARDEK-------RLQALAAELEGA----LPLP 56
Query: 72 VDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLV 131
D+R+E AV A + FG + LVNNA + L+++ L+ N G +
Sbjct: 57 GDVREEGDWARAVAAMEEAFGELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAF-- 114
Query: 132 KASQGLEIQSAVNAAVDKFGG 152
L I+ AV A + + GG
Sbjct: 115 -----LGIRHAVPALLRRGGG 130
>pdb|3UN1|A Chain A, Crystal Structure Of An Oxidoreductase From Sinorhizobium
Meliloti 1021
pdb|3UN1|B Chain B, Crystal Structure Of An Oxidoreductase From Sinorhizobium
Meliloti 1021
pdb|3UN1|C Chain C, Crystal Structure Of An Oxidoreductase From Sinorhizobium
Meliloti 1021
pdb|3UN1|D Chain D, Crystal Structure Of An Oxidoreductase From Sinorhizobium
Meliloti 1021
Length = 260
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 50/114 (43%)
Query: 143 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSN 202
V +++FG ID LVNNA + YD +N G + ++Q+ K
Sbjct: 87 VREGIERFGRIDSLVNNAGVFLAKPFVEXTQEDYDHNLGVNVAGFFHITQRAAAEXLKQG 146
Query: 203 HAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
HI++I+ L P +++K G++ +A EF + VNA+ P
Sbjct: 147 SGHIVSITTSLVDQPXVGXPSALASLTKGGLNAVTRSLAXEFSRSGVRVNAVSP 200
>pdb|3NUG|A Chain A, Crystal Structure Of Wild Type Tetrameric Pyridoxal
4-Dehydrogenase From Mesorhizobium Loti
pdb|3NUG|B Chain B, Crystal Structure Of Wild Type Tetrameric Pyridoxal
4-Dehydrogenase From Mesorhizobium Loti
pdb|3NUG|C Chain C, Crystal Structure Of Wild Type Tetrameric Pyridoxal
4-Dehydrogenase From Mesorhizobium Loti
pdb|3NUG|D Chain D, Crystal Structure Of Wild Type Tetrameric Pyridoxal
4-Dehydrogenase From Mesorhizobium Loti
pdb|3RWB|A Chain A, Crystal Structure Of Complex Of 4pal (4-Pyridoxolactone)
And Pldh (Tetrameric Pyridoxal 4-Dehydrogenase) From
Mesorhizobium Loti
pdb|3RWB|B Chain B, Crystal Structure Of Complex Of 4pal (4-Pyridoxolactone)
And Pldh (Tetrameric Pyridoxal 4-Dehydrogenase) From
Mesorhizobium Loti
pdb|3RWB|C Chain C, Crystal Structure Of Complex Of 4pal (4-Pyridoxolactone)
And Pldh (Tetrameric Pyridoxal 4-Dehydrogenase) From
Mesorhizobium Loti
pdb|3RWB|D Chain D, Crystal Structure Of Complex Of 4pal (4-Pyridoxolactone)
And Pldh (Tetrameric Pyridoxal 4-Dehydrogenase) From
Mesorhizobium Loti
Length = 247
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 77/169 (45%), Gaps = 23/169 (13%)
Query: 151 GGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHA-HILNI 209
GGIDILVNNAS + + L + + +N GT++V++ ++ + A +++I
Sbjct: 79 GGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISI 138
Query: 210 SPPLNLNPFWFK--NHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP--------RTA 259
+ N F+ N AY +K G+ +A E NI NA+ P + +
Sbjct: 139 AS----NTFFAGTPNMAAYVAAKGGVIGFTRALATELGKYNITANAVTPGLIESDGVKAS 194
Query: 260 IYTAA---IEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFL 305
+ A +EML A +PE +AD ++ S + +TGQ L
Sbjct: 195 PHNEAFGFVEML-----QAMKGKGQPEHIADVVSFLASDDARWITGQTL 238
Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 30/59 (50%)
Query: 73 DIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLV 131
DI D +V++ GGIDILVNNAS + + L + + +N GT++V
Sbjct: 60 DISDPGSVKALFAEIQALTGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIV 118
>pdb|2PH3|A Chain A, Crystal Structure Of 3-oxoacyl-[acyl Carrier Protein]
Reductase Ttha0415 From Thermus Thermophilus
pdb|2PH3|B Chain B, Crystal Structure Of 3-oxoacyl-[acyl Carrier Protein]
Reductase Ttha0415 From Thermus Thermophilus
Length = 245
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 81/183 (44%), Gaps = 16/183 (8%)
Query: 137 LEIQSA---VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQK 193
LE ++A V+ A + GG+D LVNNA T + ++ + + N + +++
Sbjct: 62 LEAEAATALVHQAAEVLGGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTRE 121
Query: 194 CLPYLKKSNHAHILNISPPLNL--NPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAV 251
+ + K+ I+NI+ + + NP Y SK G+ +A+E+ I V
Sbjct: 122 AVKLMMKARFGRIVNITSVVGILGNP----GQANYVASKAGLIGFTRAVAKEYAQRGITV 177
Query: 252 NALWPRTAIYTAAIEMLTGGSADA------KATSRKPEIMADAAYYILSSNPPSLTGQFL 305
NA+ P I T E L +A +PE +A+A +++S +TGQ L
Sbjct: 178 NAVAP-GFIETEMTERLPQEVKEAYLKQIPAGRFGRPEEVAEAVAFLVSEKAGYITGQTL 236
Query: 306 IDD 308
D
Sbjct: 237 CVD 239
>pdb|3OIC|A Chain A, Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl) From
B. Subtilis (Apo Form)
pdb|3OIC|D Chain D, Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl) From
B. Subtilis (Apo Form)
pdb|3OID|A Chain A, Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl) From
B. Subtilis (Complex With Nadp And Tcl)
pdb|3OID|B Chain B, Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl) From
B. Subtilis (Complex With Nadp And Tcl)
pdb|3OID|C Chain C, Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl) From
B. Subtilis (Complex With Nadp And Tcl)
pdb|3OID|D Chain D, Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl) From
B. Subtilis (Complex With Nadp And Tcl)
Length = 258
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 76/169 (44%), Gaps = 11/169 (6%)
Query: 148 DKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHIL 207
+ FG +D+ VNNA++ L +D INA+ +Q+ ++K+ HI+
Sbjct: 78 ETFGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIV 137
Query: 208 NISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPRTAIYTAAIEM 267
+IS ++ + +N+ +SK + +A E I VNA+ AI T A++
Sbjct: 138 SISSLGSIR--YLENYTTVGVSKAALEALTRYLAVELSPKQIIVNAV-SGGAIDTDALKH 194
Query: 268 LTGGS---ADAKATS---RKPEI--MADAAYYILSSNPPSLTGQFLIDD 308
DA+ + R EI M D +++SS + GQ +I D
Sbjct: 195 FPNREDLLEDARQNTPAGRMVEIKDMVDTVEFLVSSKADMIRGQTIIVD 243
Score = 29.6 bits (65), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 25/114 (21%), Positives = 42/114 (36%), Gaps = 6/114 (5%)
Query: 13 FITGASRXXXXXXXXXXXXXXXNIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIV 72
+TG+SR NIVI + + A+E+E G L
Sbjct: 8 LVTGSSRGVGKAAAIRLAENGYNIVI------NYARSKKAALETAEEIEKLGVKVLVVKA 61
Query: 73 DIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINAR 126
++ ++ + FG +D+ VNNA++ L +D INA+
Sbjct: 62 NVGQPAKIKEMFQQIDETFGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAK 115
>pdb|3QLJ|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From
Mycobacterium Avium
pdb|3QLJ|B Chain B, Crystal Structure Of A Short Chain Dehydrogenase From
Mycobacterium Avium
pdb|3QLJ|C Chain C, Crystal Structure Of A Short Chain Dehydrogenase From
Mycobacterium Avium
pdb|3QLJ|D Chain D, Crystal Structure Of A Short Chain Dehydrogenase From
Mycobacterium Avium
pdb|3QLJ|E Chain E, Crystal Structure Of A Short Chain Dehydrogenase From
Mycobacterium Avium
pdb|3QLJ|F Chain F, Crystal Structure Of A Short Chain Dehydrogenase From
Mycobacterium Avium
Length = 322
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 87/193 (45%), Gaps = 16/193 (8%)
Query: 143 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLK--- 199
+ AV+ FGG+D+LVNNA + ANT +++D + ++ +G + + Y +
Sbjct: 105 IQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLS 164
Query: 200 ---KSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
K+ I+N S L + + Y+ +K G++ L A E + VNA+ P
Sbjct: 165 KAGKAVDGRIINTSSGAGLQGSVGQGN--YSAAKAGIATLTLVGAAEMGRYGVTVNAIAP 222
Query: 257 --RTAI-YTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFLIDDEVLKA 313
RT + T EM+ + D + PE ++ ++ S+ +TG+ EV
Sbjct: 223 SARTRMTETVFAEMMA--TQDQDFDAMAPENVSPLVVWLGSAEARDVTGKVF---EVEGG 277
Query: 314 QHIDLEQYSYVPN 326
+ E +++ P
Sbjct: 278 KIRVAEGWAHGPQ 290
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
Query: 50 PGTIYSAAKEVED----AGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAIS 105
P + SAA+ V D AGG + ++ D + AV+ FGG+D+LVNNA +
Sbjct: 67 PASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGIVR 126
Query: 106 LTDTANTPLKKYDLMNQINARGTY 129
ANT +++D + ++ +G +
Sbjct: 127 DRMIANTSEEEFDAVIAVHLKGHF 150
>pdb|2Q2Q|A Chain A, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2Q|B Chain B, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2Q|C Chain C, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2Q|D Chain D, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2Q|E Chain E, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2Q|F Chain F, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2Q|G Chain G, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2Q|H Chain H, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2V|A Chain A, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2V|B Chain B, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2V|C Chain C, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2V|D Chain D, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2W|A Chain A, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2W|B Chain B, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2W|C Chain C, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2W|D Chain D, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
Length = 255
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 55/119 (46%), Gaps = 2/119 (1%)
Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
+I++ A +FGG+DILVNNA + PL+ +D + +N + ++ LP
Sbjct: 65 QIEALFALAEREFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPG 124
Query: 198 LKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
++ N I+NI+ L AY +K+G+ + E N+ NA+ P
Sbjct: 125 MRARNWGRIINIASVHGL--VGSTGKAAYVAAKHGVVGLTKVVGLETATSNVTCNAICP 181
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 47/123 (38%), Gaps = 9/123 (7%)
Query: 7 LSGLTIFITGASRXXXXXXXXXXXXXXXNIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
L G T +TG++ NIV+ +P P L K V
Sbjct: 2 LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNG-FGDPAPALAEIARHGVKAVHHP--- 57
Query: 67 CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINAR 126
D+ D +++ A +FGG+DILVNNA + PL+ +D + +N
Sbjct: 58 -----ADLSDVAQIEALFALAEREFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLS 112
Query: 127 GTY 129
+
Sbjct: 113 AVF 115
>pdb|2PNF|A Chain A, Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-carrier
Protein) Reductase
pdb|2PNF|B Chain B, Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-carrier
Protein) Reductase
pdb|2P68|A Chain A, Crystal Structure Of Aq_1716 From Aquifex Aeolicus Vf5
pdb|2P68|B Chain B, Crystal Structure Of Aq_1716 From Aquifex Aeolicus Vf5
Length = 248
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 65/136 (47%), Gaps = 11/136 (8%)
Query: 129 YLVKASQGLEI----QSAVNAAVDKF----GGIDILVNNASAISLTDTANTPLKKYDLMN 180
Y VKA G+E+ + ++N A ++ GIDILVNNA L ++ +
Sbjct: 55 YGVKA-HGVEMNLLSEESINKAFEEIYNLVDGIDILVNNAGITRDKLFLRMSLLDWEEVL 113
Query: 181 QINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGM 240
++N GT+LV+Q L + K I+NIS + V Y+ +K G+ +
Sbjct: 114 KVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTG--NVGQVNYSTTKAGLIGFTKSL 171
Query: 241 AEEFKGDNIAVNALWP 256
A+E N+ VNA+ P
Sbjct: 172 AKELAPRNVLVNAVAP 187
Score = 30.0 bits (66), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 50/127 (39%), Gaps = 8/127 (6%)
Query: 6 KLSGLTIFITGASRXXXXXXXXXXXXXXXNIVIAAKTAEPHPKLPGTIYSAAKEVEDA-G 64
KL G +TG++R ++I + E + A+E+ + G
Sbjct: 4 KLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAK-------AVAEEIANKYG 56
Query: 65 GNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQIN 124
+++ E ++ A + GIDILVNNA L ++ + ++N
Sbjct: 57 VKAHGVEMNLLSEESINKAFEEIYNLVDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVN 116
Query: 125 ARGTYLV 131
GT+LV
Sbjct: 117 LTGTFLV 123
>pdb|1IKT|A Chain A, Liganded Sterol Carrier Protein Type 2 (Scp-2) Like Domain
Of Human Multifunctional Enzyme Type 2 (Mfe-2)
Length = 120
Score = 48.9 bits (115), Expect = 5e-06, Method: Composition-based stats.
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Query: 306 IDDEVLKAQHIDLEQYSYVPNGAAEGSWHIDLKTXXXXXXXXXXXXTVDATLTMTEKNFI 365
I EV+K + E + G W IDLK+ D T+ +++++F+
Sbjct: 22 IGPEVVKKVNAVFE-WHITKGGNIGAKWTIDLKSGSGKVYQGPAKGAADTTIILSDEDFM 80
Query: 366 ALFEGKLKPTSAFMTGKLKISGNLQKAMKLEKLM 399
+ GKL P AF +G+LK GN+ + KL+ ++
Sbjct: 81 EVVLGKLDPQKAFFSGRLKARGNIMLSQKLQMIL 114
>pdb|2HSD|A Chain A, The Refined Three-Dimensional Structure Of 3alpha,20beta-
Hydroxysteroid Dehydrogenase And Possible Roles Of The
Residues Conserved In Short-Chain Dehydrogenases
pdb|2HSD|B Chain B, The Refined Three-Dimensional Structure Of 3alpha,20beta-
Hydroxysteroid Dehydrogenase And Possible Roles Of The
Residues Conserved In Short-Chain Dehydrogenases
pdb|2HSD|C Chain C, The Refined Three-Dimensional Structure Of 3alpha,20beta-
Hydroxysteroid Dehydrogenase And Possible Roles Of The
Residues Conserved In Short-Chain Dehydrogenases
pdb|2HSD|D Chain D, The Refined Three-Dimensional Structure Of 3alpha,20beta-
Hydroxysteroid Dehydrogenase And Possible Roles Of The
Residues Conserved In Short-Chain Dehydrogenases
Length = 253
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 56/117 (47%), Gaps = 2/117 (1%)
Query: 140 QSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLK 199
Q V A ++FG +D LVNNA + ++++ + +IN G ++ + +P +K
Sbjct: 67 QRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMK 126
Query: 200 KSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
+ I+NIS L + +Y SK+G+ + A E D I VN++ P
Sbjct: 127 DAGGGSIVNISSAAGLMGLALTS--SYGASKWGVRGLSKLAAVELGTDRIRVNSVHP 181
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 19/165 (11%)
Query: 7 LSGLTIFITGASRXXXXXXXXXXXXXXXNIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
LSG T+ ITG +R +V+A E + A+E+ DA
Sbjct: 3 LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGA-------ATARELGDA--- 52
Query: 67 CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINAR 126
+D+ E Q V A ++FG +D LVNNA + ++++ + +IN
Sbjct: 53 ARYQHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLT 112
Query: 127 GTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANT 171
G + + +++ + A D GG +VN +SA L A T
Sbjct: 113 GVF-------IGMKTVIPAMKDAGGG--SIVNISSAAGLMGLALT 148
>pdb|2QQ5|A Chain A, Crystal Structure Of Human Sdr Family Member 1
Length = 260
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 63/148 (42%), Gaps = 24/148 (16%)
Query: 7 LSGLTIFITGASRXXXXXXXXXXXXXXXNIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
++G +TGASR + I + + T+ A+E + GG
Sbjct: 3 MNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLD-------TLRVVAQEAQSLGGQ 55
Query: 67 CLPCIVDIRDEHAVQSAVNAA-VDKFGGIDILVNNASA--ISLTDTAN-----TPLKKYD 118
C+P + D E V+S ++ G +D+LVNNA A ++ +T N TP +D
Sbjct: 56 CVPVVCDSSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWD 115
Query: 119 LMNQINARGTY---------LVKASQGL 137
+N + RG Y +V A QGL
Sbjct: 116 DINNVGLRGHYFCSVYGARLMVPAGQGL 143
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 61/135 (45%), Gaps = 11/135 (8%)
Query: 130 LVKASQGLEIQSAVNAA-VDKFGGIDILVNNASA--ISLTDTAN-----TPLKKYDLMNQ 181
+ +SQ E++S ++ G +D+LVNNA A ++ +T N TP +D +N
Sbjct: 60 VCDSSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINN 119
Query: 182 INARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMA 241
+ RG Y S + + I+ IS P +L + +V Y + K A A
Sbjct: 120 VGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQ---YMFNVPYGVGKAACDKLAADCA 176
Query: 242 EEFKGDNIAVNALWP 256
E + ++ +LWP
Sbjct: 177 HELRRHGVSCVSLWP 191
>pdb|1HDC|A Chain A, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid
Dehydrogenase By A Licorice-Derived Steroidal Inhibitor
pdb|1HDC|B Chain B, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid
Dehydrogenase By A Licorice-Derived Steroidal Inhibitor
pdb|1HDC|C Chain C, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid
Dehydrogenase By A Licorice-Derived Steroidal Inhibitor
pdb|1HDC|D Chain D, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid
Dehydrogenase By A Licorice-Derived Steroidal Inhibitor
Length = 254
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 56/117 (47%), Gaps = 2/117 (1%)
Query: 140 QSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLK 199
Q V A ++FG +D LVNNA + ++++ + +IN G ++ + +P +K
Sbjct: 67 QRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMK 126
Query: 200 KSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
+ I+NIS L + +Y SK+G+ + A E D I VN++ P
Sbjct: 127 DAGGGSIVNISSAAGLMGLALTS--SYGASKWGVRGLSKLAAVELGTDRIRVNSVHP 181
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 19/165 (11%)
Query: 7 LSGLTIFITGASRXXXXXXXXXXXXXXXNIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
LSG T+ ITG +R +V+A E + A+E+ DA
Sbjct: 3 LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGA-------ATARELGDA--- 52
Query: 67 CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINAR 126
+D+ E Q V A ++FG +D LVNNA + ++++ + +IN
Sbjct: 53 ARYQHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLT 112
Query: 127 GTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANT 171
G + + +++ + A D GG +VN +SA L A T
Sbjct: 113 GVF-------IGMKTVIPAMKDAGGG--SIVNISSAAGLMGLALT 148
>pdb|1IPE|A Chain A, Tropinone Reductase-Ii Complexed With Nadph
pdb|1IPE|B Chain B, Tropinone Reductase-Ii Complexed With Nadph
pdb|1IPF|A Chain A, Tropinone Reductase-Ii Complexed With Nadph And Tropinone
pdb|1IPF|B Chain B, Tropinone Reductase-Ii Complexed With Nadph And Tropinone
Length = 259
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 72/156 (46%), Gaps = 10/156 (6%)
Query: 118 DLMNQINARGTYLVKAS-----QGLEIQSAVNAAVDKF-GGIDILVNNASAISLTDTANT 171
D + Q ++G + V+AS E Q +N + F G ++ILVNNA + + +
Sbjct: 47 DCLTQWRSKG-FKVEASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDY 105
Query: 172 PLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKY 231
++ Y L+ IN Y +S P+LK S +++ IS ++ Y +K
Sbjct: 106 TVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYE--AVYGATKG 163
Query: 232 GMSMCALGMAEEFKGDNIAVNALWPRTAIYTAAIEM 267
M +A E+ DNI VN + P I T+ +EM
Sbjct: 164 AMDQLTRCLAFEWAKDNIRVNGVGP-GVIATSLVEM 198
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 49/134 (36%), Gaps = 28/134 (20%)
Query: 7 LSGLTIFITGASRXXXXXXXXXXXXXXXNIVIAAKTAEPHPKLPGTIYSAA---KEVEDA 63
L G T +TG SR I E L ++Y+ + KE+ D
Sbjct: 6 LEGCTALVTGGSRG-----------------IGYGIVEELASLGASVYTCSRNQKELNDC 48
Query: 64 -------GGNCLPCIVDIRDEHAVQSAVNAAVDKF-GGIDILVNNASAISLTDTANTPLK 115
G + D+ Q +N + F G ++ILVNNA + + + ++
Sbjct: 49 LTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVE 108
Query: 116 KYDLMNQINARGTY 129
Y L+ IN Y
Sbjct: 109 DYSLIMSINFEAAY 122
>pdb|1NFF|A Chain A, Crystal Structure Of Rv2002 Gene Product From
Mycobacterium Tuberculosis
pdb|1NFF|B Chain B, Crystal Structure Of Rv2002 Gene Product From
Mycobacterium Tuberculosis
pdb|1NFQ|A Chain A, Rv2002 Gene Product From Mycobacterium Tuberculosis
pdb|1NFQ|B Chain B, Rv2002 Gene Product From Mycobacterium Tuberculosis
pdb|1NFQ|C Chain C, Rv2002 Gene Product From Mycobacterium Tuberculosis
pdb|1NFQ|D Chain D, Rv2002 Gene Product From Mycobacterium Tuberculosis
Length = 260
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 60/123 (48%), Gaps = 2/123 (1%)
Query: 134 SQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQK 193
+Q + ++AV+ AV FGG+ +LVNNA +++ + L ++ + +N G +L +
Sbjct: 63 TQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRA 122
Query: 194 CLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNA 253
+ +K++ I+NIS L H YT +K+ + A E I VN+
Sbjct: 123 VVKPMKEAGRGSIINISSIEGLAGT-VACH-GYTATKFAVRGLTKSTALELGPSGIRVNS 180
Query: 254 LWP 256
+ P
Sbjct: 181 IHP 183
Score = 36.6 bits (83), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 33/59 (55%)
Query: 72 VDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYL 130
+D+ ++AV+ AV FGG+ +LVNNA +++ + L ++ + +N G +L
Sbjct: 60 LDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFL 118
>pdb|2AE2|A Chain A, Tropinone Reductase-Ii Complexed With Nadp+ And
Pseudotropine
pdb|2AE2|B Chain B, Tropinone Reductase-Ii Complexed With Nadp+ And
Pseudotropine
pdb|2AE1|A Chain A, Tropinone Reductase-Ii
Length = 260
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 72/156 (46%), Gaps = 10/156 (6%)
Query: 118 DLMNQINARGTYLVKAS-----QGLEIQSAVNAAVDKF-GGIDILVNNASAISLTDTANT 171
D + Q ++G + V+AS E Q +N + F G ++ILVNNA + + +
Sbjct: 48 DCLTQWRSKG-FKVEASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDY 106
Query: 172 PLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKY 231
++ Y L+ IN Y +S P+LK S +++ IS ++ Y +K
Sbjct: 107 TVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYE--AVYGATKG 164
Query: 232 GMSMCALGMAEEFKGDNIAVNALWPRTAIYTAAIEM 267
M +A E+ DNI VN + P I T+ +EM
Sbjct: 165 AMDQLTRCLAFEWAKDNIRVNGVGP-GVIATSLVEM 199
Score = 32.7 bits (73), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 50/140 (35%), Gaps = 28/140 (20%)
Query: 1 MINTGKLSGLTIFITGASRXXXXXXXXXXXXXXXNIVIAAKTAEPHPKLPGTIYSAA--- 57
M L G T +TG SR I E L ++Y+ +
Sbjct: 1 MAGRWNLEGCTALVTGGSRG-----------------IGYGIVEELASLGASVYTCSRNQ 43
Query: 58 KEVEDA-------GGNCLPCIVDIRDEHAVQSAVNAAVDKF-GGIDILVNNASAISLTDT 109
KE+ D G + D+ Q +N + F G ++ILVNNA + +
Sbjct: 44 KELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEA 103
Query: 110 ANTPLKKYDLMNQINARGTY 129
+ ++ Y L+ IN Y
Sbjct: 104 KDYTVEDYSLIMSINFEAAY 123
>pdb|3OEC|A Chain A, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Thermoresistibile
pdb|3OEC|B Chain B, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Thermoresistibile
pdb|3OEC|C Chain C, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Thermoresistibile
pdb|3OEC|D Chain D, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Thermoresistibile
Length = 317
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 59/132 (44%), Gaps = 13/132 (9%)
Query: 6 KLSGLTIFITGASRXXXXXXXXXXXXXXXNIVIAAKTAEPHPKL------PGTIYSAAKE 59
+L G FITGA+R +IV A P L P + +
Sbjct: 43 RLQGKVAFITGAARGQGRTHAVRLAQDGADIV-AIDLCRQQPNLDYAQGSPEELKETVRL 101
Query: 60 VEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNN------ASAISLTDTANTP 113
VE+ G + D+RD ++Q+ V+ A+ +FG IDILV+N +SLTD +
Sbjct: 102 VEEQGRRIIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSD 161
Query: 114 LKKYDLMNQINA 125
+ + +L+ +A
Sbjct: 162 ILQTNLIGAWHA 173
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 62/125 (49%), Gaps = 15/125 (12%)
Query: 139 IQSAVNAAVDKFGGIDILVNN------ASAISLTDTANTPLKKYDLMNQINARGTYLVSQ 192
+Q+ V+ A+ +FG IDILV+N +SLTD +++ + Q N G + +
Sbjct: 122 LQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTD------QQWSDILQTNLIGAWHACR 175
Query: 193 KCLP-YLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAV 251
LP +++ ++ +S + L ++H Y SK+G+ L +A E NI V
Sbjct: 176 AVLPSMIERGQGGSVIFVSSTVGLRGAPGQSH--YAASKHGVQGLMLSLANEVGRHNIRV 233
Query: 252 NALWP 256
N++ P
Sbjct: 234 NSVNP 238
>pdb|1EDO|A Chain A, The X-Ray Structure Of Beta-Keto Acyl Carrier Protein
Reductase From Brassica Napus Complexed With Nadp+
pdb|2CDH|G Chain G, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
Acid Synthase At 5 Angstrom Resolution.
pdb|2CDH|H Chain H, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
Acid Synthase At 5 Angstrom Resolution.
pdb|2CDH|I Chain I, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
Acid Synthase At 5 Angstrom Resolution.
pdb|2CDH|J Chain J, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
Acid Synthase At 5 Angstrom Resolution.
pdb|2CDH|K Chain K, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
Acid Synthase At 5 Angstrom Resolution.
pdb|2CDH|L Chain L, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
Acid Synthase At 5 Angstrom Resolution
Length = 244
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 80/193 (41%), Gaps = 18/193 (9%)
Query: 69 PCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARG- 127
P +V + A+ ++ K G +LVN A + + ++ QI A G
Sbjct: 2 PVVVVTGASRGIGKAIALSLGK-AGCKVLVNYARSAKAAE---------EVSKQIEAYGG 51
Query: 128 ---TYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINA 184
T+ S+ ++++ + A+D +G ID++VNNA T ++D + +N
Sbjct: 52 QAITFGGDVSKEADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNL 111
Query: 185 RGTYLVSQKCLPYLKKSNHAHILNISPPLNL-NPFWFKNHVAYTISKYGMSMCALGMAEE 243
G +L +Q + K I+NI+ + L N+ A G S A A E
Sbjct: 112 TGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTA---ARE 168
Query: 244 FKGDNIAVNALWP 256
NI VN + P
Sbjct: 169 GASRNINVNVVCP 181
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 53/123 (43%), Gaps = 14/123 (11%)
Query: 12 IFITGASRXXXXXXXXXXXXXXXNIVI----AAKTAEPHPKLPGTIYSAAKEVEDAGGNC 67
+ +TGASR +++ +AK AE +K++E GG
Sbjct: 4 VVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAE----------EVSKQIEAYGGQA 53
Query: 68 LPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARG 127
+ D+ E V++ + A+D +G ID++VNNA T ++D + +N G
Sbjct: 54 ITFGGDVSKEADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTG 113
Query: 128 TYL 130
+L
Sbjct: 114 VFL 116
>pdb|3AUS|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose
Dehydrogenase 4 In Ligand-Free Form
pdb|3AUS|B Chain B, Crystal Structure Of Bacillus Megaterium Glucose
Dehydrogenase 4 In Ligand-Free Form
pdb|3AUT|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose
Dehydrogenase 4 In Complex With Nadh
pdb|3AUT|B Chain B, Crystal Structure Of Bacillus Megaterium Glucose
Dehydrogenase 4 In Complex With Nadh
pdb|3AUU|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose
Dehydrogenase 4 In Complex With D-Glucose
pdb|3AUU|B Chain B, Crystal Structure Of Bacillus Megaterium Glucose
Dehydrogenase 4 In Complex With D-Glucose
Length = 269
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 78/179 (43%), Gaps = 10/179 (5%)
Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
++ + V A+ +FG +D+++NNA + + L ++ + N G +L S++ + Y
Sbjct: 79 DVVNLVQTAIKEFGTLDVMINNAGVENPVPSHELSLDNWNKVIDTNLTGAFLGSREAIKY 138
Query: 198 LKKSN-HAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
+++ +++N+S + P+ H Y SK GM + +A E+ I VN + P
Sbjct: 139 FVENDIKGNVINMSSVHEMIPWPLFVH--YAASKGGMKLMTETLALEYAPKGIRVNNIGP 196
Query: 257 RTAIYTAAIEMLTGGSADAKATSR-------KPEIMADAAYYILSSNPPSLTGQFLIDD 308
E A S KPE +A A ++ SS +TG L D
Sbjct: 197 GAMNTPINAEKFADPVQRADVESMIPMGYIGKPEEVAAVAAFLASSQASYVTGITLFAD 255
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%)
Query: 56 AAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLK 115
A KEVE+AGG + D+ E V + V A+ +FG +D+++NNA + + L
Sbjct: 56 AKKEVEEAGGQAIIVQGDVTKEEDVVNLVQTAIKEFGTLDVMINNAGVENPVPSHELSLD 115
Query: 116 KYDLMNQINARGTYL 130
++ + N G +L
Sbjct: 116 NWNKVIDTNLTGAFL 130
>pdb|3RKR|A Chain A, Crystal Structure Of A Metagenomic Short-Chain
Oxidoreductase (Sdr) In Complex With Nadp
pdb|3RKR|B Chain B, Crystal Structure Of A Metagenomic Short-Chain
Oxidoreductase (Sdr) In Complex With Nadp
pdb|3RKR|C Chain C, Crystal Structure Of A Metagenomic Short-Chain
Oxidoreductase (Sdr) In Complex With Nadp
pdb|3RKR|D Chain D, Crystal Structure Of A Metagenomic Short-Chain
Oxidoreductase (Sdr) In Complex With Nadp
Length = 262
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 71/158 (44%), Gaps = 8/158 (5%)
Query: 151 GGIDILVNNASAISLTDTANT-PLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNI 209
G D+LVNNA +T ++D + +N + YL+ + P + + HI+NI
Sbjct: 105 GRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINI 164
Query: 210 SPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPRTAIYTAAIEMLT 269
S NP + AYT SK+G++ AEE + + V+ + P + + T E
Sbjct: 165 SSLAGKNP--VADGAAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGS-VRT---EFGV 218
Query: 270 GGSADAKATSR-KPEIMADAAYYILSSNPPSLTGQFLI 306
G SA A +P+ +AD + + S + L+
Sbjct: 219 GLSAKKSALGAIEPDDIADVVALLATQADQSFISEVLV 256
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 49/126 (38%), Gaps = 8/126 (6%)
Query: 7 LSGLTIFITGASRXXXXXXXXXXXXXXXNIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
LSG +TGASR +V+ A+ E + + +E+ AGG
Sbjct: 27 LSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVE-------KLRAVEREIVAAGGE 79
Query: 67 CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANT-PLKKYDLMNQINA 125
D+ A+ + + G D+LVNNA +T ++D + +N
Sbjct: 80 AESHACDLSHSDAIAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNL 139
Query: 126 RGTYLV 131
+ YL+
Sbjct: 140 KAPYLL 145
>pdb|3AY7|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose
Dehydrogenase 4 G259a Mutant
pdb|3AY7|B Chain B, Crystal Structure Of Bacillus Megaterium Glucose
Dehydrogenase 4 G259a Mutant
Length = 269
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 78/179 (43%), Gaps = 10/179 (5%)
Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
++ + V A+ +FG +D+++NNA + + L ++ + N G +L S++ + Y
Sbjct: 79 DVVNLVQTAIKEFGTLDVMINNAGVENPVPSHELSLDNWNKVIDTNLTGAFLGSREAIKY 138
Query: 198 LKKSN-HAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
+++ +++N+S + P+ H Y SK GM + +A E+ I VN + P
Sbjct: 139 FVENDIKGNVINMSSVHEMIPWPLFVH--YAASKGGMKLMTETLALEYAPKGIRVNNIGP 196
Query: 257 RTAIYTAAIEMLTGGSADAKATSR-------KPEIMADAAYYILSSNPPSLTGQFLIDD 308
E A S KPE +A A ++ SS +TG L D
Sbjct: 197 GAMNTPINAEKFADPVQRADVESMIPMGYIGKPEEVAAVAAFLASSQASYVTGITLFAD 255
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%)
Query: 56 AAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLK 115
A KEVE+AGG + D+ E V + V A+ +FG +D+++NNA + + L
Sbjct: 56 AKKEVEEAGGQAIIVQGDVTKEEDVVNLVQTAIKEFGTLDVMINNAGVENPVPSHELSLD 115
Query: 116 KYDLMNQINARGTYL 130
++ + N G +L
Sbjct: 116 NWNKVIDTNLTGAFL 130
>pdb|1IY8|A Chain A, Crystal Structure Of Levodione Reductase
pdb|1IY8|B Chain B, Crystal Structure Of Levodione Reductase
pdb|1IY8|C Chain C, Crystal Structure Of Levodione Reductase
pdb|1IY8|D Chain D, Crystal Structure Of Levodione Reductase
pdb|1IY8|E Chain E, Crystal Structure Of Levodione Reductase
pdb|1IY8|F Chain F, Crystal Structure Of Levodione Reductase
pdb|1IY8|G Chain G, Crystal Structure Of Levodione Reductase
pdb|1IY8|H Chain H, Crystal Structure Of Levodione Reductase
Length = 267
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 64/140 (45%), Gaps = 4/140 (2%)
Query: 128 TYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTD-TANTPLKKYDLMNQINARG 186
T + S ++++ V A ++FG ID NNA + T + ++D + IN RG
Sbjct: 68 TTVADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRG 127
Query: 187 TYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKG 246
+L +K L +++ ++N + + N Y +K+G+ A E+
Sbjct: 128 VFLGLEKVLKIMREQGSGMVVNTASVGGIR--GIGNQSGYAAAKHGVVGLTRNSAVEYGR 185
Query: 247 DNIAVNALWPRTAIYTAAIE 266
I +NA+ P AI+T +E
Sbjct: 186 YGIRINAIAP-GAIWTPMVE 204
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 67 CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTD-TANTPLKKYDLMNQINA 125
L + D+ DE V++ V A ++FG ID NNA + T + ++D + IN
Sbjct: 66 VLTTVADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINL 125
Query: 126 RGTYL 130
RG +L
Sbjct: 126 RGVFL 130
>pdb|3AY6|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose
Dehydrogenase 4 A258f Mutant In Complex With Nadh And
D-Glucose
pdb|3AY6|B Chain B, Crystal Structure Of Bacillus Megaterium Glucose
Dehydrogenase 4 A258f Mutant In Complex With Nadh And
D-Glucose
pdb|3AY6|C Chain C, Crystal Structure Of Bacillus Megaterium Glucose
Dehydrogenase 4 A258f Mutant In Complex With Nadh And
D-Glucose
pdb|3AY6|D Chain D, Crystal Structure Of Bacillus Megaterium Glucose
Dehydrogenase 4 A258f Mutant In Complex With Nadh And
D-Glucose
Length = 269
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 78/179 (43%), Gaps = 10/179 (5%)
Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
++ + V A+ +FG +D+++NNA + + L ++ + N G +L S++ + Y
Sbjct: 79 DVVNLVQTAIKEFGTLDVMINNAGVENPVPSHELSLDNWNKVIDTNLTGAFLGSREAIKY 138
Query: 198 LKKSN-HAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
+++ +++N+S + P+ H Y SK GM + +A E+ I VN + P
Sbjct: 139 FVENDIKGNVINMSSVHEMIPWPLFVH--YAASKGGMKLMTETLALEYAPKGIRVNNIGP 196
Query: 257 RTAIYTAAIEMLTGGSADAKATSR-------KPEIMADAAYYILSSNPPSLTGQFLIDD 308
E A S KPE +A A ++ SS +TG L D
Sbjct: 197 GAMNTPINAEKFADPVQRADVESMIPMGYIGKPEEVAAVAAFLASSQASYVTGITLFAD 255
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%)
Query: 56 AAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLK 115
A KEVE+AGG + D+ E V + V A+ +FG +D+++NNA + + L
Sbjct: 56 AKKEVEEAGGQAIIVQGDVTKEEDVVNLVQTAIKEFGTLDVMINNAGVENPVPSHELSLD 115
Query: 116 KYDLMNQINARGTYL 130
++ + N G +L
Sbjct: 116 NWNKVIDTNLTGAFL 130
>pdb|2HQ1|A Chain A, Crystal Structure Of Orf 1438 A Putative GlucoseRIBITOL
Dehydrogenase From Clostridium Thermocellum
Length = 247
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 56/125 (44%), Gaps = 6/125 (4%)
Query: 6 KLSGLTIFITGASRXXXXXXXXXXXXXXXNIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
+L G T +TG+SR NIV+ A ++ + A+E + AG
Sbjct: 2 QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPAST------SLDATAEEFKAAGI 55
Query: 66 NCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINA 125
N + D+++ V++ V A+D FG IDILVNNA T K +D + N
Sbjct: 56 NVVVAKGDVKNPEDVENMVKTAMDAFGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNL 115
Query: 126 RGTYL 130
+ YL
Sbjct: 116 KSAYL 120
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 52/119 (43%), Gaps = 2/119 (1%)
Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
++++ V A+D FG IDILVNNA T K +D + N + YL ++
Sbjct: 69 DVENMVKTAMDAFGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKI 128
Query: 198 LKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
+ K I+NI+ + Y SK G+ +A+EF I NA+ P
Sbjct: 129 MLKQKSGKIINITSIAGI--IGNAGQANYAASKAGLIGFTKSIAKEFAAKGIYCNAVAP 185
>pdb|1YBV|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex
With Nadph And An Active Site Inhibitor
pdb|1YBV|B Chain B, Structure Of Trihydroxynaphthalene Reductase In Complex
With Nadph And An Active Site Inhibitor
Length = 283
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 78/177 (44%), Gaps = 17/177 (9%)
Query: 93 GIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGL--EIQSAVNAAVDKF 150
G ++VN A++ + +KK N VKA+ G+ +I AV F
Sbjct: 53 GCKVIVNYANSTESAEEVVAAIKK-------NGSDAACVKANVGVVEDIVRMFEEAVKIF 105
Query: 151 GGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHIL-NI 209
G +DI+ +N+ +S + +++D + IN RG + V+++ +L+ ++ +I
Sbjct: 106 GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSI 165
Query: 210 SPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP---RTAIYTA 263
+ P H Y+ SK + A MA + I VN + P +T +Y A
Sbjct: 166 TGQAKAVP----KHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHA 218
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Query: 87 AVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLV--KASQGLEI 139
AV FG +DI+ +N+ +S + +++D + IN RG + V +A + LEI
Sbjct: 101 AVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEI 155
>pdb|1NFR|A Chain A, Rv2002 Gene Product From Mycobacterium Tuberculosis
pdb|1NFR|B Chain B, Rv2002 Gene Product From Mycobacterium Tuberculosis
pdb|1NFR|C Chain C, Rv2002 Gene Product From Mycobacterium Tuberculosis
pdb|1NFR|D Chain D, Rv2002 Gene Product From Mycobacterium Tuberculosis
Length = 260
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 59/123 (47%), Gaps = 2/123 (1%)
Query: 134 SQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQK 193
+Q + ++AV+ AV FGG+ +LVNNA +++ + L ++ + +N G +L +
Sbjct: 63 TQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRA 122
Query: 194 CLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNA 253
+ K++ I+NIS L H YT +K+ + A E I VN+
Sbjct: 123 VVKPXKEAGRGSIINISSIEGLAGT-VACH-GYTATKFAVRGLTKSTALELGPSGIRVNS 180
Query: 254 LWP 256
+ P
Sbjct: 181 IHP 183
Score = 36.2 bits (82), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 33/59 (55%)
Query: 72 VDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYL 130
+D+ ++AV+ AV FGG+ +LVNNA +++ + L ++ + +N G +L
Sbjct: 60 LDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFL 118
>pdb|3NDR|A Chain A, Crystal Structure Of Tetrameric Pyridoxal 4-Dehydrogenase
From Mesorhizobium Loti
pdb|3NDR|B Chain B, Crystal Structure Of Tetrameric Pyridoxal 4-Dehydrogenase
From Mesorhizobium Loti
pdb|3NDR|C Chain C, Crystal Structure Of Tetrameric Pyridoxal 4-Dehydrogenase
From Mesorhizobium Loti
pdb|3NDR|D Chain D, Crystal Structure Of Tetrameric Pyridoxal 4-Dehydrogenase
From Mesorhizobium Loti
Length = 247
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 73/166 (43%), Gaps = 17/166 (10%)
Query: 151 GGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHA-HILNI 209
GGIDILVNNAS + + L + + +N GT++V++ + + A +++I
Sbjct: 79 GGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQXRAAGKAGRVISI 138
Query: 210 SPPLNLNPFWFK--NHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP--------RTA 259
+ N F+ N AY +K G+ +A E NI NA+ P + +
Sbjct: 139 AS----NTFFAGTPNXAAYVAAKGGVIGFTRALATELGKYNITANAVTPGLIESDGVKAS 194
Query: 260 IYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFL 305
+ A + A +PE +AD ++ S + +TGQ L
Sbjct: 195 PHNEAFGFVE--XLQAXKGKGQPEHIADVVSFLASDDARWITGQTL 238
Score = 33.1 bits (74), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 23/40 (57%)
Query: 92 GGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLV 131
GGIDILVNNAS + + L + + +N GT++V
Sbjct: 79 GGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIV 118
>pdb|1DOH|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex
With Nadph And 4-nitro-inden-1-one
pdb|1DOH|B Chain B, Structure Of Trihydroxynaphthalene Reductase In Complex
With Nadph And 4-nitro-inden-1-one
pdb|1G0N|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex
With Nadph And 4,5,6,7-Tetrachloro-Phthalide
pdb|1G0N|B Chain B, Structure Of Trihydroxynaphthalene Reductase In Complex
With Nadph And 4,5,6,7-Tetrachloro-Phthalide
pdb|1G0O|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex
With Nadph And Pyroquilon
pdb|1G0O|B Chain B, Structure Of Trihydroxynaphthalene Reductase In Complex
With Nadph And Pyroquilon
pdb|1G0O|C Chain C, Structure Of Trihydroxynaphthalene Reductase In Complex
With Nadph And Pyroquilon
pdb|1G0O|D Chain D, Structure Of Trihydroxynaphthalene Reductase In Complex
With Nadph And Pyroquilon
Length = 283
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 78/177 (44%), Gaps = 17/177 (9%)
Query: 93 GIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGL--EIQSAVNAAVDKF 150
G ++VN A++ + +KK N VKA+ G+ +I AV F
Sbjct: 53 GCKVIVNYANSTESAEEVVAAIKK-------NGSDAACVKANVGVVEDIVRMFEEAVKIF 105
Query: 151 GGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHIL-NI 209
G +DI+ +N+ +S + +++D + IN RG + V+++ +L+ ++ +I
Sbjct: 106 GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSI 165
Query: 210 SPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP---RTAIYTA 263
+ P H Y+ SK + A MA + I VN + P +T +Y A
Sbjct: 166 TGQAKAVP----KHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHA 218
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Query: 87 AVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLV--KASQGLEI 139
AV FG +DI+ +N+ +S + +++D + IN RG + V +A + LEI
Sbjct: 101 AVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEI 155
>pdb|2BD0|A Chain A, Chlorobium Tepidum Sepiapterin Reductase Complexed With
Nadp And Sepiapterin
pdb|2BD0|B Chain B, Chlorobium Tepidum Sepiapterin Reductase Complexed With
Nadp And Sepiapterin
pdb|2BD0|C Chain C, Chlorobium Tepidum Sepiapterin Reductase Complexed With
Nadp And Sepiapterin
pdb|2BD0|D Chain D, Chlorobium Tepidum Sepiapterin Reductase Complexed With
Nadp And Sepiapterin
Length = 244
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 56/125 (44%), Gaps = 3/125 (2%)
Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
+++ V+++G ID LVNNA ++ + +D N +GT+ ++Q
Sbjct: 72 DVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFAL 131
Query: 198 LKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPR 257
+++ + HI I+ F++ Y +SK+G M + N+ + + P
Sbjct: 132 MERQHSGHIFFITSVAATKA--FRHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQP- 188
Query: 258 TAIYT 262
A+YT
Sbjct: 189 GAVYT 193
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 73/195 (37%), Gaps = 32/195 (16%)
Query: 40 AKTAEPHPKLPGTIYSAAKEVEDAGGNCLPC----------IVDIRDEHAVQSAVNAAVD 89
A+ A HP + +++ D L C DI D V+ V+
Sbjct: 23 ARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVE 82
Query: 90 KFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDK 149
++G ID LVNNA ++ + +D N +GT+ + A+ A +++
Sbjct: 83 RYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFF--------LTQALFALMER 134
Query: 150 FGGIDILVNNASAISLTDTANTPLKKYD---LMNQINARGTYLVSQKCLPYLKKSNHAHI 206
++ +T A T ++ M++ RG LV L Y +K N I
Sbjct: 135 -------QHSGHIFFITSVAATKAFRHSSIYCMSKFGQRG--LVETMRL-YARKCN-VRI 183
Query: 207 LNISPPLNLNPFWFK 221
++ P P W K
Sbjct: 184 TDVQPGAVYTPMWGK 198
>pdb|3UF0|A Chain A, Crystal Structure Of A Putative Nad(P) Dependent Gluconate
5- Dehydrogenase From Beutenbergia Cavernae(Efi Target
Efi-502044) With Bound Nadp (Low Occupancy)
pdb|3UF0|B Chain B, Crystal Structure Of A Putative Nad(P) Dependent Gluconate
5- Dehydrogenase From Beutenbergia Cavernae(Efi Target
Efi-502044) With Bound Nadp (Low Occupancy)
Length = 273
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 66/163 (40%), Gaps = 9/163 (5%)
Query: 153 IDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPP 212
+D+LVNNA I+ L ++ + +N +++S+ + I+ I+
Sbjct: 107 VDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASM 166
Query: 213 LNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPRTAIYTAAIEMLTGGS 272
L+ +N AY SK+ + +A E+ G + VNAL P + +
Sbjct: 167 LSFQGG--RNVAAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALRADDE 224
Query: 273 ADAKATSR-------KPEIMADAAYYILSSNPPSLTGQFLIDD 308
A+ T+R PE M A ++ S + GQ L D
Sbjct: 225 RAAEITARIPAGRWATPEDMVGPAVFLASDAASYVHGQVLAVD 267
Score = 32.0 bits (71), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Query: 57 AKEVEDAGGNCLPCIVDIRD-EHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLK 115
A E+ D GG+ + D+ D E A A A + +D+LVNNA I+ L
Sbjct: 71 ADEIADGGGSAEAVVADLADLEGAANVAEELAATRR--VDVLVNNAGIIARAPAEEVSLG 128
Query: 116 KYDLMNQINARGTYLVKASQG 136
++ + +N +++ S G
Sbjct: 129 RWREVLTVNLDAAWVLSRSFG 149
>pdb|2A4K|A Chain A, 3-Oxoacyl-[acyl Carrier Protein] Reductase From Thermus
Thermophilus Tt0137
pdb|2A4K|B Chain B, 3-Oxoacyl-[acyl Carrier Protein] Reductase From Thermus
Thermophilus Tt0137
Length = 263
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 77/177 (43%), Gaps = 14/177 (7%)
Query: 139 IQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYL 198
+++ A+++FG + + + A + N PL+ ++ + ++N G++LV++K L
Sbjct: 67 VEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVL 126
Query: 199 KKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP-- 256
++ ++ L F + Y K G+ A +A E + VN L P
Sbjct: 127 EEGG--SLVLTGSVAGLGAFGLAH---YAAGKLGVVGLARTLALELARKGVRVNVLLPGL 181
Query: 257 -----RTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFLIDD 308
+ A E G S +A +PE +A AA ++LS +TGQ L D
Sbjct: 182 IQTPMTAGLPPWAWEQEVGASPLGRAG--RPEEVAQAALFLLSEESAYITGQALYVD 236
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 71 IVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYL 130
+ D+ D AV++ A+++FG + + + A + N PL+ ++ + ++N G++L
Sbjct: 58 VADVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFL 117
Query: 131 V--KASQGLE 138
V KA + LE
Sbjct: 118 VARKAGEVLE 127
>pdb|3TZQ|B Chain B, Crystal Structure Of A Short-Chain Type
DehydrogenaseREDUCTASE FROM Mycobacterium Marinum
pdb|3TZQ|A Chain A, Crystal Structure Of A Short-Chain Type
DehydrogenaseREDUCTASE FROM Mycobacterium Marinum
pdb|3TZQ|D Chain D, Crystal Structure Of A Short-Chain Type
DehydrogenaseREDUCTASE FROM Mycobacterium Marinum
pdb|3TZQ|C Chain C, Crystal Structure Of A Short-Chain Type
DehydrogenaseREDUCTASE FROM Mycobacterium Marinum
pdb|3TZQ|F Chain F, Crystal Structure Of A Short-Chain Type
DehydrogenaseREDUCTASE FROM Mycobacterium Marinum
pdb|3TZQ|E Chain E, Crystal Structure Of A Short-Chain Type
DehydrogenaseREDUCTASE FROM Mycobacterium Marinum
pdb|3TZQ|H Chain H, Crystal Structure Of A Short-Chain Type
DehydrogenaseREDUCTASE FROM Mycobacterium Marinum
pdb|3TZQ|G Chain G, Crystal Structure Of A Short-Chain Type
DehydrogenaseREDUCTASE FROM Mycobacterium Marinum
Length = 271
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 87/201 (43%), Gaps = 12/201 (5%)
Query: 129 YLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPL--KKYDLMNQINARG 186
++V + + +++ ++ +D FG +DI+ NNA+ D T + +D +NARG
Sbjct: 62 HVVDLTNEVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARG 121
Query: 187 TYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKG 246
T L+ + +P L + I+NIS + AY +K + +A ++
Sbjct: 122 TMLMCKYAIPRLISAGGGAIVNISSATAHAAYDMST--AYACTKAAIETLTRYVATQYGR 179
Query: 247 DNIAVNALWPRTAIYTAAIEM-LTGGSADAKATSR------KPEIMADAAYYILSSNPPS 299
+ NA+ P + T +E+ L D AT +P +A+ ++ S
Sbjct: 180 HGVRCNAIAPGL-VRTPRLEVGLPQPIVDIFATHHLAGRIGEPHEIAELVCFLASDRAAF 238
Query: 300 LTGQFLIDDEVLKAQHIDLEQ 320
+TGQ + D L A L Q
Sbjct: 239 ITGQVIAADSGLLAHLPGLPQ 259
Score = 36.2 bits (82), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 71 IVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPL--KKYDLMNQINARGT 128
+VD+ +E +V++ ++ +D FG +DI+ NNA+ D T + +D +NARGT
Sbjct: 63 VVDLTNEVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGT 122
Query: 129 YLV 131
L+
Sbjct: 123 MLM 125
>pdb|2EW8|A Chain A, Crystal Structure Of The (s)-specific 1-phenylethanol
Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1
pdb|2EW8|B Chain B, Crystal Structure Of The (s)-specific 1-phenylethanol
Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1
pdb|2EW8|C Chain C, Crystal Structure Of The (s)-specific 1-phenylethanol
Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1
pdb|2EW8|D Chain D, Crystal Structure Of The (s)-specific 1-phenylethanol
Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1
pdb|2EWM|A Chain A, Crystal Structure Of The (S)-Specific 1-Phenylethanol
Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1
pdb|2EWM|B Chain B, Crystal Structure Of The (S)-Specific 1-Phenylethanol
Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1
Length = 249
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 88/214 (41%), Gaps = 13/214 (6%)
Query: 104 ISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI 163
I++ D P + + N T SQ ++++ + FG DILVNNA
Sbjct: 34 IAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIY 93
Query: 164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFK-- 221
L +++ +IN +L+++ +P +K++ I+N++ +W K
Sbjct: 94 PLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTS----TTYWLKIE 149
Query: 222 NHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP---RTAIYTA----AIEMLTGGSAD 274
+ Y +K +A + D I VNA+ P RTA A A+ +
Sbjct: 150 AYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLPNMLQ 209
Query: 275 AKATSRKPEIMADAAYYILSSNPPSLTGQFLIDD 308
A + P + AA ++ S + +TGQ L D
Sbjct: 210 AIPRLQVPLDLTGAAAFLASDDASFITGQTLAVD 243
>pdb|3UWR|A Chain A, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Avium Strain 104
pdb|3UWR|B Chain B, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Avium Strain 104
pdb|3UWR|C Chain C, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Avium Strain 104
pdb|3UWR|D Chain D, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Avium Strain 104
Length = 286
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 51/106 (48%), Gaps = 7/106 (6%)
Query: 2 INTGKLSGLTIFITGASRXXXXXXXXXXXXXXXNIVIA------AKTAEPHPKLPGTIYS 55
+ TG+++G FI+GA+R +I+ A PH P +
Sbjct: 8 VMTGRVAGKVAFISGAARGQGRSHAVRLAQEGADIIAIDICGPIENLAYPH-STPEDLAE 66
Query: 56 AAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
A V+D + VD+RD A++SAV++ V++ G +DI+V NA
Sbjct: 67 TADLVKDLDRRIVTAQVDVRDFEALKSAVDSGVEQLGRLDIIVANA 112
Score = 29.6 bits (65), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 52/123 (42%), Gaps = 10/123 (8%)
Query: 139 IQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKK-----YDLMNQINARGTYLVSQK 193
++SAV++ V++ G +DI+V NA T L K + M IN G + +
Sbjct: 91 LKSAVDSGVEQLGRLDIIVANAG----VGTDGRKLHKIRDNVWQDMIDINLTGVWHTVKA 146
Query: 194 CLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNA 253
+P++ + ++ + + N Y +K+G+ A E I VNA
Sbjct: 147 GVPHVLSGGRGGSIVLTSSVGGRKA-YPNTGHYIAAKHGVIGLMRAFAVELGPHMIRVNA 205
Query: 254 LWP 256
+ P
Sbjct: 206 VLP 208
>pdb|3SX2|A Chain A, Crystal Structure Of A Putative
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Mycobacterium Paratuberculosis In Complex With Nad
pdb|3SX2|B Chain B, Crystal Structure Of A Putative
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Mycobacterium Paratuberculosis In Complex With Nad
pdb|3SX2|C Chain C, Crystal Structure Of A Putative
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Mycobacterium Paratuberculosis In Complex With Nad
pdb|3SX2|D Chain D, Crystal Structure Of A Putative
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Mycobacterium Paratuberculosis In Complex With Nad
pdb|3SX2|E Chain E, Crystal Structure Of A Putative
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Mycobacterium Paratuberculosis In Complex With Nad
pdb|3SX2|F Chain F, Crystal Structure Of A Putative
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Mycobacterium Paratuberculosis In Complex With Nad
pdb|3SX2|G Chain G, Crystal Structure Of A Putative
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Mycobacterium Paratuberculosis In Complex With Nad
pdb|3SX2|H Chain H, Crystal Structure Of A Putative
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Mycobacterium Paratuberculosis In Complex With Nad
Length = 278
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 5/102 (4%)
Query: 5 GKLSGLTIFITGASRXXXXXXXXXXXXXXXNIVIAAKTAE----PHP-KLPGTIYSAAKE 59
G L+G FITGA+R +I+ + P+P P + + K
Sbjct: 9 GPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKL 68
Query: 60 VEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
VED G + D+RD ++ +A+ A +D+ G +DI+V NA
Sbjct: 69 VEDIGSRIVARQADVRDRESLSAALQAGLDELGRLDIVVANA 110
>pdb|3N74|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reduc Brucella Melitensis
pdb|3N74|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reduc Brucella Melitensis
pdb|3N74|C Chain C, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reduc Brucella Melitensis
pdb|3N74|D Chain D, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reduc Brucella Melitensis
Length = 261
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 77/179 (43%), Gaps = 28/179 (15%)
Query: 147 VDKFGGIDILVNNASAISLTDTAN-TPLKKYDLMNQINARGTYLVSQKCLPYLK----KS 201
+ KFG +DILVNNA A +++D + +N RG YL++ K +P+ K K
Sbjct: 78 LSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKG 137
Query: 202 NHAHILNIS------PPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALW 255
ILN++ P NL W+ + +S +A E I V AL
Sbjct: 138 QECVILNVASTGAGRPRPNLA--WYNATKGWVVS------VTKALAIELAPAKIRVVALN 189
Query: 256 P---RTAIYTAAI----EMLTGGSADAKATSR--KPEIMADAAYYILSSNPPSLTGQFL 305
P T + T + E + D+ R KP+ +A+AA ++ S +TG L
Sbjct: 190 PVAGETPLLTTFMGEDSEEIRKKFRDSIPMGRLLKPDDLAEAAAFLCSPQASMITGVAL 248
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 51/126 (40%), Gaps = 11/126 (8%)
Query: 7 LSGLTIFITGASRXXXXXXXXXXXXXXXNIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
L G ITGA +VI + ++ G I AA
Sbjct: 7 LEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAA--------- 57
Query: 67 CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTAN-TPLKKYDLMNQINA 125
L DI E V +AV AA+ KFG +DILVNNA A +++D + +N
Sbjct: 58 -LAVAADISKEADVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNV 116
Query: 126 RGTYLV 131
RG YL+
Sbjct: 117 RGVYLM 122
>pdb|4DA9|A Chain A, Crystal Structure Of Putative Short-Chain
DehydrogenaseREDUCTASE FROM Sinorhizobium Meliloti 1021
pdb|4DA9|B Chain B, Crystal Structure Of Putative Short-Chain
DehydrogenaseREDUCTASE FROM Sinorhizobium Meliloti 1021
pdb|4DA9|C Chain C, Crystal Structure Of Putative Short-Chain
DehydrogenaseREDUCTASE FROM Sinorhizobium Meliloti 1021
pdb|4DA9|D Chain D, Crystal Structure Of Putative Short-Chain
DehydrogenaseREDUCTASE FROM Sinorhizobium Meliloti 1021
Length = 280
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 58/124 (46%), Gaps = 11/124 (8%)
Query: 140 QSAVNAAVDKFGGIDILVNNASAISLT--DTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
Q+ V+A V +FG ID LVNNA S+ D + + +D + +N RGT +Q L
Sbjct: 95 QATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKA 154
Query: 198 LKKSN---HAHILNIS--PPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVN 252
S+ I+NI+ + +P + Y SK G++ + G+A IAV
Sbjct: 155 XLASDARASRSIINITSVSAVXTSP----ERLDYCXSKAGLAAFSQGLALRLAETGIAVF 210
Query: 253 ALWP 256
+ P
Sbjct: 211 EVRP 214
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 59 EVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLT--DTANTPLKK 116
E+ G + D+ D + Q+ V+A V +FG ID LVNNA S+ D + +
Sbjct: 73 ELSGLGARVIFLRADLADLSSHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPEN 132
Query: 117 YDLMNQINARGTYL 130
+D + +N RGT
Sbjct: 133 FDTIVGVNLRGTVF 146
>pdb|3GAF|A Chain A, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid
Dehydrogenase From Brucella Melitensis
pdb|3GAF|B Chain B, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid
Dehydrogenase From Brucella Melitensis
pdb|3GAF|C Chain C, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid
Dehydrogenase From Brucella Melitensis
pdb|3GAF|D Chain D, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid
Dehydrogenase From Brucella Melitensis
pdb|3GAF|E Chain E, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid
Dehydrogenase From Brucella Melitensis
pdb|3GAF|F Chain F, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid
Dehydrogenase From Brucella Melitensis
pdb|3GAF|G Chain G, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid
Dehydrogenase From Brucella Melitensis
pdb|3GAF|H Chain H, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid
Dehydrogenase From Brucella Melitensis
Length = 256
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 79/184 (42%), Gaps = 33/184 (17%)
Query: 140 QSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLK 199
++ + AA+D+FG I +LVNNA + P+ ++ ++N + +SQ P+++
Sbjct: 77 EAVIKAALDQFGKITVLVNNAGG-GGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQ 135
Query: 200 KSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPRTA 259
K+ ILNIS N +Y SK ++ +A + I VNA+ P A
Sbjct: 136 KAGGGAILNISSMAGENT--NVRMASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAP-GA 192
Query: 260 IYTAAIEMLTGGSADAKATSRKPEI------------------MADAAYYILSSNPPSLT 301
I T DA AT PEI +A+AA ++ S ++
Sbjct: 193 IKT-----------DALATVLTPEIERAMLKHTPLGRLGEAQDIANAALFLCSPAAAWIS 241
Query: 302 GQFL 305
GQ L
Sbjct: 242 GQVL 245
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 57 AKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
A + AGG + ++ DE ++ + AA+D+FG I +LVNNA
Sbjct: 53 AAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFGKITVLVNNA 97
>pdb|3ICC|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis At 1.87 A
Resolution
pdb|3ICC|B Chain B, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis At 1.87 A
Resolution
Length = 255
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 74/162 (45%), Gaps = 12/162 (7%)
Query: 153 IDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPP 212
DIL+NNA T + +D +NA+ + + Q+ L L+ +++ I+NIS
Sbjct: 92 FDILINNAGIGPGAFIEETTEQFFDRXVSVNAKAPFFIIQQALSRLR--DNSRIINISSA 149
Query: 213 LNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPRTAIYTAAIEMLTGGS 272
+ +AY+ +K ++ +A++ I VNA+ P E+L+
Sbjct: 150 AT--RISLPDFIAYSXTKGAINTXTFTLAKQLGARGITVNAILPGFVKTDXNAELLSDPX 207
Query: 273 ADAKATS-----RKPEI--MADAAYYILSSNPPSLTGQFLID 307
AT+ R E+ +AD A ++ S + +TGQ LID
Sbjct: 208 XKQYATTISAFNRLGEVEDIADTAAFLASPDSRWVTGQ-LID 248
>pdb|3PK0|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE
SDR FROM Mycobacterium Smegmatis
pdb|3PK0|B Chain B, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE
SDR FROM Mycobacterium Smegmatis
pdb|3PK0|C Chain C, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE
SDR FROM Mycobacterium Smegmatis
pdb|3PK0|D Chain D, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE
SDR FROM Mycobacterium Smegmatis
Length = 262
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 52/119 (43%), Gaps = 17/119 (14%)
Query: 146 AVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAH 205
AV++FGGID++ NA A ++ + + +N GT+ Q CL L S
Sbjct: 82 AVEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGR 141
Query: 206 IL---NISPPLNLNPFWFKNHVAYTISKYGMSMCA-LGM----AEEFKGDNIAVNALWP 256
++ +I+ P+ P W S YG + A LG A E I VNA+ P
Sbjct: 142 VVLTSSITGPITGYPGW---------SHYGATKAAQLGFMRTAAIELAPHKITVNAIMP 191
Score = 35.0 bits (79), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 32/171 (18%), Positives = 66/171 (38%), Gaps = 24/171 (14%)
Query: 7 LSGLTIFITGASRXXXXXXXXXXXXXXXNIVIAAKTAEPHPKLPGTIYSAAKEVEDAG-G 65
L G ++ +TG ++ N+ +A ++ I + +++ G G
Sbjct: 8 LQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTA-------DIDACVADLDQLGSG 60
Query: 66 NCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINA 125
+ D+ D + AV++FGGID++ NA A ++ + + +N
Sbjct: 61 KVIGVQTDVSDRAQCDALAGRAVEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNV 120
Query: 126 RGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKY 176
GT+ AV A +D ++ + + + LT + P+ Y
Sbjct: 121 NGTFY-----------AVQACLDA-----LIASGSGRVVLTSSITGPITGY 155
>pdb|4DML|A Chain A, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942
pdb|4DML|B Chain B, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942
pdb|4DML|C Chain C, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942
pdb|4DML|D Chain D, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942
pdb|4DMM|A Chain A, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942 In Complex With Nadp
pdb|4DMM|B Chain B, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942 In Complex With Nadp
pdb|4DMM|C Chain C, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942 In Complex With Nadp
pdb|4DMM|D Chain D, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942 In Complex With Nadp
Length = 269
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 60/127 (47%), Gaps = 10/127 (7%)
Query: 134 SQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMN--QINARGTYLVS 191
SQ E+++ A ++++G +D+LVNNA DT +K+ D + +N G +L S
Sbjct: 88 SQESEVEALFAAVIERWGRLDVLVNNAGITR--DTLLLRMKRDDWQSVLDLNLGGVFLCS 145
Query: 192 QKCLPYLKKSNHAHILNISPPLNL--NPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNI 249
+ + K I+NI+ + NP Y+ +K G+ +A+E I
Sbjct: 146 RAAAKIMLKQRSGRIINIASVVGEMGNP----GQANYSAAKAGVIGLTKTVAKELASRGI 201
Query: 250 AVNALWP 256
VNA+ P
Sbjct: 202 TVNAVAP 208
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Query: 73 DIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMN--QINARGTYL 130
D+ E V++ A ++++G +D+LVNNA DT +K+ D + +N G +L
Sbjct: 86 DVSQESEVEALFAAVIERWGRLDVLVNNAGITR--DTLLLRMKRDDWQSVLDLNLGGVFL 143
>pdb|3TOX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase In
Complex With Nad(P) From Sinorhizobium Meliloti 1021
pdb|3TOX|B Chain B, Crystal Structure Of A Short Chain Dehydrogenase In
Complex With Nad(P) From Sinorhizobium Meliloti 1021
pdb|3TOX|C Chain C, Crystal Structure Of A Short Chain Dehydrogenase In
Complex With Nad(P) From Sinorhizobium Meliloti 1021
pdb|3TOX|D Chain D, Crystal Structure Of A Short Chain Dehydrogenase In
Complex With Nad(P) From Sinorhizobium Meliloti 1021
pdb|3TOX|E Chain E, Crystal Structure Of A Short Chain Dehydrogenase In
Complex With Nad(P) From Sinorhizobium Meliloti 1021
pdb|3TOX|F Chain F, Crystal Structure Of A Short Chain Dehydrogenase In
Complex With Nad(P) From Sinorhizobium Meliloti 1021
pdb|3TOX|G Chain G, Crystal Structure Of A Short Chain Dehydrogenase In
Complex With Nad(P) From Sinorhizobium Meliloti 1021
pdb|3TOX|I Chain I, Crystal Structure Of A Short Chain Dehydrogenase In
Complex With Nad(P) From Sinorhizobium Meliloti 1021
Length = 280
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 75/179 (41%), Gaps = 11/179 (6%)
Query: 140 QSAVNAAVDKFGGIDILVNNASAI-SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYL 198
++ V AV +FGG+D NNA A+ ++ + ++ ++ + N +L ++ +P +
Sbjct: 73 EALVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAI 132
Query: 199 KKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPRT 258
L + + F Y SK G+ +A E I VNAL P
Sbjct: 133 AALGGGS-LTFTSSFVGHTAGFAGVAPYAASKAGLIGLVQALAVELGARGIRVNALLPGG 191
Query: 259 AIYTAAIEMLTGGSADAK-------ATSR--KPEIMADAAYYILSSNPPSLTGQFLIDD 308
A L G + + + A R +PE +A+AA Y+ S +TG L+ D
Sbjct: 192 TDTPANFANLPGAAPETRGFVEGLHALKRIARPEEIAEAALYLASDGASFVTGAALLAD 250
Score = 31.6 bits (70), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 39/99 (39%), Gaps = 7/99 (7%)
Query: 6 KLSGLTIFITGASRXXXXXXXXXXXXXXXNIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
+L G +TGAS +V+ A+ +L E+ GG
Sbjct: 5 RLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELT-------DEIAGGGG 57
Query: 66 NCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAI 104
D+ DE ++ V AV +FGG+D NNA A+
Sbjct: 58 EAAALAGDVGDEALHEALVELAVRRFGGLDTAFNNAGAL 96
>pdb|2ZAT|A Chain A, Crystal Structure Of A Mammalian Reductase
pdb|2ZAT|B Chain B, Crystal Structure Of A Mammalian Reductase
pdb|2ZAT|C Chain C, Crystal Structure Of A Mammalian Reductase
pdb|2ZAT|D Chain D, Crystal Structure Of A Mammalian Reductase
Length = 260
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 57/118 (48%), Gaps = 3/118 (2%)
Query: 140 QSAVNAAVDKFGGIDILVNNASAIS-LTDTANTPLKKYDLMNQINARGTYLVSQKCLPYL 198
+ V AV+ GG+DILV+NA+ + + + +D + +N + T L+++ +P +
Sbjct: 79 ERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEM 138
Query: 199 KKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
+K +L +S +P F N Y +SK + +A E NI VN L P
Sbjct: 139 EKRGGGSVLIVSSVGAYHP--FPNLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAP 194
>pdb|3TSC|A Chain A, Crystal Structure Of Short Chain Dehydrogenase Map_2410
From Mycobacterium Paratuberculosis Bound To Nad
pdb|3TSC|B Chain B, Crystal Structure Of Short Chain Dehydrogenase Map_2410
From Mycobacterium Paratuberculosis Bound To Nad
pdb|3TSC|C Chain C, Crystal Structure Of Short Chain Dehydrogenase Map_2410
From Mycobacterium Paratuberculosis Bound To Nad
pdb|3TSC|D Chain D, Crystal Structure Of Short Chain Dehydrogenase Map_2410
From Mycobacterium Paratuberculosis Bound To Nad
Length = 277
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 59/132 (44%), Gaps = 8/132 (6%)
Query: 5 GKLSGLTIFITGASRXXXXXXXXXXXXXXXNIV---IAAK--TAEPH-PKLPGTIYSAAK 58
GKL G FITGA+R +I+ IA K + P+ P P + +
Sbjct: 7 GKLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVR 66
Query: 59 EVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTAN-TPLKKY 117
VE A + +VD RD ++ V+ V G +DI+V NA + + TP
Sbjct: 67 LVEAANRRIVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFR 126
Query: 118 DLMNQINARGTY 129
D+M+ IN GT+
Sbjct: 127 DVMD-INVTGTW 137
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 55/123 (44%), Gaps = 9/123 (7%)
Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTAN-TPLKKYDLMNQINARGTYLVSQKCLP 196
++ V+ V G +DI+V NA + + TP D+M+ IN GT+ P
Sbjct: 87 RLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMD-INVTGTWNTVMAGAP 145
Query: 197 YLKKSNHAH---ILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNA 253
+ + +++ + + + PF + YT SK+ ++ A A E +I VN+
Sbjct: 146 RIIEGGRGGSIILISSAAGMKMQPF----MIHYTASKHAVTGLARAFAAELGKHSIRVNS 201
Query: 254 LWP 256
+ P
Sbjct: 202 VHP 204
>pdb|1G6K|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant E96a
Complexed With Nad+
pdb|1G6K|B Chain B, Crystal Structure Of Glucose Dehydrogenase Mutant E96a
Complexed With Nad+
pdb|1G6K|E Chain E, Crystal Structure Of Glucose Dehydrogenase Mutant E96a
Complexed With Nad+
pdb|1G6K|F Chain F, Crystal Structure Of Glucose Dehydrogenase Mutant E96a
Complexed With Nad+
Length = 261
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 92/214 (42%), Gaps = 16/214 (7%)
Query: 105 SLTDTANTPLKKYDLM--NQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASA 162
S D AN+ L++ + I +G V++ ++ + V +A+ +FG +D+++NNA
Sbjct: 40 SKEDEANSVLEEIKKVGGEAIAVKGDVTVES----DVINLVQSAIKEFGKLDVMINNAGL 95
Query: 163 ISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSN-HAHILNISPPLNLNPFWFK 221
+ + L ++ + N G +L S++ + Y +++ ++N+S P+
Sbjct: 96 ANPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLF 155
Query: 222 NHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSR- 280
H Y SK GM + +A E+ I VN + P E A S
Sbjct: 156 VH--YAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMI 213
Query: 281 ------KPEIMADAAYYILSSNPPSLTGQFLIDD 308
+PE +A A ++ SS +TG L D
Sbjct: 214 PMGYIGEPEEIAAVAAWLASSEASYVTGITLFAD 247
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/124 (21%), Positives = 52/124 (41%), Gaps = 6/124 (4%)
Query: 7 LSGLTIFITGASRXXXXXXXXXXXXXXXNIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
L G + ITG+S +V+ ++ E S +E++ GG
Sbjct: 5 LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEAN------SVLEEIKKVGGE 58
Query: 67 CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINAR 126
+ D+ E V + V +A+ +FG +D+++NNA + + L ++ + N
Sbjct: 59 AIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLANPVSSHEMSLSDWNKVIDTNLT 118
Query: 127 GTYL 130
G +L
Sbjct: 119 GAFL 122
>pdb|4HP8|A Chain A, Crystal Structure Of A Putative 2-Deoxy-D-Gluconate
3-Dehydrogenase From Agrobacterium Tumefaciens (Target
Efi-506435) With Bound Nadp
pdb|4HP8|B Chain B, Crystal Structure Of A Putative 2-Deoxy-D-Gluconate
3-Dehydrogenase From Agrobacterium Tumefaciens (Target
Efi-506435) With Bound Nadp
Length = 247
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 77/175 (44%), Gaps = 20/175 (11%)
Query: 145 AAVDKF--GGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQK-CLPYLKKS 201
AA D F G DILVNNA I D+ +D + +N + + +Q L K
Sbjct: 70 AAKDSFTDAGFDILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKG 129
Query: 202 NHAHILNISPPLNLNPFWFKNHV---AYTISKYGMSMCALGMAEEFKGDNIAVNALWPRT 258
++NI+ L+ F+ + +YT +K+G++ +A E+ I VNA+ P
Sbjct: 130 RSGKVVNIASLLS-----FQGGIRVPSYTAAKHGVAGLTKLLANEWAAKGINVNAIAPGY 184
Query: 259 AIYTAAIEMLTGGSADAKAT-SRKP-------EIMADAAYYILSSNPPSLTGQFL 305
I T E L +A KA R P E +A AA ++ S+ + G L
Sbjct: 185 -IETNNTEALRADAARNKAILERIPAGRWGHSEDIAGAAVFLSSAAADYVHGAIL 238
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 49/130 (37%), Gaps = 14/130 (10%)
Query: 1 MINTGKLSGLTIFITGASRXXXXXXXXXXXXXXXNIVIAAKTAEPHPKLPGTIYSAAKEV 60
M N L G +TGA+ +V AA+ A T+ AK+
Sbjct: 1 MKNPFSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDE-----TLDIIAKD- 54
Query: 61 EDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLM 120
GGN ++D D A + + A G DILVNNA I D+ +D +
Sbjct: 55 ---GGNASALLIDFADPLAAKDSFTDA-----GFDILVNNAGIIRRADSVEFSELDWDEV 106
Query: 121 NQINARGTYL 130
+N + +
Sbjct: 107 MDVNLKALFF 116
>pdb|2D1Y|A Chain A, Crystal Structure Of Tt0321 From Thermus Thermophilus Hb8
pdb|2D1Y|B Chain B, Crystal Structure Of Tt0321 From Thermus Thermophilus Hb8
pdb|2D1Y|C Chain C, Crystal Structure Of Tt0321 From Thermus Thermophilus Hb8
pdb|2D1Y|D Chain D, Crystal Structure Of Tt0321 From Thermus Thermophilus Hb8
Length = 256
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 74/178 (41%), Gaps = 15/178 (8%)
Query: 143 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSN 202
V A G +D+LVNNA+ + L ++ + ++N +S ++K
Sbjct: 68 VEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVG 127
Query: 203 HAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPRTAIYT 262
I+N++ L F + + AY SK G+ +A + I VNA+ P AI T
Sbjct: 128 GGAIVNVASVQGL--FAEQENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAP-GAIAT 184
Query: 263 AAIEMLTGGSADAKATSR------------KPEIMADAAYYILSSNPPSLTGQFLIDD 308
A+ S D + T R KPE +A+A ++ S +TG L D
Sbjct: 185 EAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEKASFITGAILPVD 242
Score = 30.0 bits (66), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Query: 58 KEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKY 117
KEV +A G VD+ DE V A G +D+LVNNA+ + L ++
Sbjct: 43 KEVAEAIGGAF-FQVDLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEW 101
Query: 118 DLMNQIN 124
+ ++N
Sbjct: 102 RRVLEVN 108
>pdb|1K2W|A Chain A, Crystal Structure Of Sorbitol Dehydrogenase From R.
Sphaeroides
pdb|1K2W|B Chain B, Crystal Structure Of Sorbitol Dehydrogenase From R.
Sphaeroides
Length = 256
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 50/126 (39%), Gaps = 10/126 (7%)
Query: 6 KLSGLTIFITGASRXXXXXXXXXXXXXXXNIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
+L G T ITG++R + IA E I AA +
Sbjct: 2 RLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIA---- 57
Query: 66 NCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINA 125
+D+ D+ ++ V +D++G IDILVNNA+ L + YD + IN
Sbjct: 58 ------LDVTDQASIDRCVAELLDRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINV 111
Query: 126 RGTYLV 131
GT +
Sbjct: 112 SGTLFM 117
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 27/54 (50%)
Query: 139 IQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQ 192
I V +D++G IDILVNNA+ L + YD + IN GT + Q
Sbjct: 66 IDRCVAELLDRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQ 119
>pdb|2B4Q|A Chain A, Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex
pdb|2B4Q|B Chain B, Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex
Length = 276
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 54/108 (50%), Gaps = 5/108 (4%)
Query: 153 IDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKS----NHAHILN 208
+DILVNNA + P+ ++ + Q+N + Q+ LP L++S N A ++N
Sbjct: 106 LDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVIN 165
Query: 209 ISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
I ++ + + AY SK + + +A+E G++I VN + P
Sbjct: 166 IGSVAGISAMGEQAY-AYGPSKAALHQLSRMLAKELVGEHINVNVIAP 212
Score = 28.5 bits (62), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 43/118 (36%), Gaps = 8/118 (6%)
Query: 7 LSGLTIFITGASRXXXXXXXXXXXXXXXNIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
L+G +TG SR + I A+ AE A + A G+
Sbjct: 27 LAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAE-------ACADTATRL-SAYGD 78
Query: 67 CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQIN 124
C D+ E + A + +DILVNNA + P+ ++ + Q+N
Sbjct: 79 CQAIPADLSSEAGARRLAQALGELSARLDILVNNAGTSWGAALESYPVSGWEKVMQLN 136
>pdb|2JAP|A Chain A, Clavulanic Acid Dehydrogenase: Structural And Biochemical
Analysis Of The Final Step In The Biosynthesis Of The
Beta- Lactamase Inhibitor Clavulanic Acid
pdb|2JAP|B Chain B, Clavulanic Acid Dehydrogenase: Structural And Biochemical
Analysis Of The Final Step In The Biosynthesis Of The
Beta- Lactamase Inhibitor Clavulanic Acid
pdb|2JAP|C Chain C, Clavulanic Acid Dehydrogenase: Structural And Biochemical
Analysis Of The Final Step In The Biosynthesis Of The
Beta- Lactamase Inhibitor Clavulanic Acid
pdb|2JAP|D Chain D, Clavulanic Acid Dehydrogenase: Structural And Biochemical
Analysis Of The Final Step In The Biosynthesis Of The
Beta- Lactamase Inhibitor Clavulanic Acid
Length = 247
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 55/120 (45%), Gaps = 3/120 (2%)
Query: 139 IQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYL 198
+ +AV + V+ GG+DILVNNA + L + + M N G +++ LP+L
Sbjct: 71 VDAAVASTVEALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHL 130
Query: 199 KKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPRT 258
+S + S +N +N Y +K+G++ + + +E + V + P T
Sbjct: 131 LRSKGTVVQMSSIAGRVN---VRNAAVYQATKFGVNAFSETLRQEVTERGVRVVVIEPGT 187
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Query: 59 EVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYD 118
E+ AG +D+ D V +AV + V+ GG+DILVNNA + L + +
Sbjct: 50 ELTAAGAKVHVLELDVADRQGVDAAVASTVEALGGLDILVNNAGIMLLGPVEDADTTDWT 109
Query: 119 LMNQINARG-TYLVKAS 134
M N G Y+ +A+
Sbjct: 110 RMIDTNLLGLMYMTRAA 126
>pdb|1GEE|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant Q252l
Complexed With Nad+
pdb|1GEE|B Chain B, Crystal Structure Of Glucose Dehydrogenase Mutant Q252l
Complexed With Nad+
pdb|1GEE|E Chain E, Crystal Structure Of Glucose Dehydrogenase Mutant Q252l
Complexed With Nad+
pdb|1GEE|F Chain F, Crystal Structure Of Glucose Dehydrogenase Mutant Q252l
Complexed With Nad+
Length = 261
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 92/214 (42%), Gaps = 16/214 (7%)
Query: 105 SLTDTANTPLKKYDLM--NQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASA 162
S D AN+ L++ + I +G V++ ++ + V +A+ +FG +D+++NNA
Sbjct: 40 SKEDEANSVLEEIKKVGGEAIAVKGDVTVES----DVINLVQSAIKEFGKLDVMINNAGL 95
Query: 163 ISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSN-HAHILNISPPLNLNPFWFK 221
+ + L ++ + N G +L S++ + Y +++ ++N+S P+
Sbjct: 96 ENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLF 155
Query: 222 NHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSR- 280
H Y SK GM + +A E+ I VN + P E A S
Sbjct: 156 VH--YAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMI 213
Query: 281 ------KPEIMADAAYYILSSNPPSLTGQFLIDD 308
+PE +A A ++ SS +TG L D
Sbjct: 214 PMGYIGEPEEIAAVAAWLASSEASYVTGITLFAD 247
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/124 (21%), Positives = 52/124 (41%), Gaps = 6/124 (4%)
Query: 7 LSGLTIFITGASRXXXXXXXXXXXXXXXNIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
L G + ITG+S +V+ ++ E S +E++ GG
Sbjct: 5 LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEAN------SVLEEIKKVGGE 58
Query: 67 CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINAR 126
+ D+ E V + V +A+ +FG +D+++NNA + + L ++ + N
Sbjct: 59 AIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLT 118
Query: 127 GTYL 130
G +L
Sbjct: 119 GAFL 122
>pdb|1RWB|A Chain A, Cooperative Effect Of Two Surface Amino Acid Mutations
(Q252l And E170k) Of Glucose Dehydrogenase From Bacillus
Megaterium Iwg3 For The Stabilization Of Oligomeric
State
pdb|1RWB|B Chain B, Cooperative Effect Of Two Surface Amino Acid Mutations
(Q252l And E170k) Of Glucose Dehydrogenase From Bacillus
Megaterium Iwg3 For The Stabilization Of Oligomeric
State
pdb|1RWB|E Chain E, Cooperative Effect Of Two Surface Amino Acid Mutations
(Q252l And E170k) Of Glucose Dehydrogenase From Bacillus
Megaterium Iwg3 For The Stabilization Of Oligomeric
State
pdb|1RWB|F Chain F, Cooperative Effect Of Two Surface Amino Acid Mutations
(Q252l And E170k) Of Glucose Dehydrogenase From Bacillus
Megaterium Iwg3 For The Stabilization Of Oligomeric
State
Length = 261
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 92/214 (42%), Gaps = 16/214 (7%)
Query: 105 SLTDTANTPLKKYDLM--NQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASA 162
S D AN+ L++ + I +G V++ ++ + V +A+ +FG +D+++NNA
Sbjct: 40 SKEDEANSVLEEIKKVGGEAIAVKGDVTVES----DVINLVQSAIKEFGKLDVMINNAGL 95
Query: 163 ISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSN-HAHILNISPPLNLNPFWFK 221
+ + L ++ + N G +L S++ + Y +++ ++N+S P+
Sbjct: 96 ENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLF 155
Query: 222 NHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSR- 280
H Y SK GM + +A E+ I VN + P E A S
Sbjct: 156 VH--YAASKGGMKLMTKTLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMI 213
Query: 281 ------KPEIMADAAYYILSSNPPSLTGQFLIDD 308
+PE +A A ++ SS +TG L D
Sbjct: 214 PMGYIGEPEEIAAVAAWLASSEASYVTGITLFAD 247
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/124 (21%), Positives = 52/124 (41%), Gaps = 6/124 (4%)
Query: 7 LSGLTIFITGASRXXXXXXXXXXXXXXXNIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
L G + ITG+S +V+ ++ E S +E++ GG
Sbjct: 5 LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEAN------SVLEEIKKVGGE 58
Query: 67 CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINAR 126
+ D+ E V + V +A+ +FG +D+++NNA + + L ++ + N
Sbjct: 59 AIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLT 118
Query: 127 GTYL 130
G +L
Sbjct: 119 GAFL 122
>pdb|1GCO|A Chain A, Crystal Structure Of Glucose Dehydrogenase Complexed With
Nad+
pdb|1GCO|B Chain B, Crystal Structure Of Glucose Dehydrogenase Complexed With
Nad+
pdb|1GCO|E Chain E, Crystal Structure Of Glucose Dehydrogenase Complexed With
Nad+
pdb|1GCO|F Chain F, Crystal Structure Of Glucose Dehydrogenase Complexed With
Nad+
Length = 261
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 92/214 (42%), Gaps = 16/214 (7%)
Query: 105 SLTDTANTPLKKYDLM--NQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASA 162
S D AN+ L++ + I +G V++ ++ + V +A+ +FG +D+++NNA
Sbjct: 40 SKEDEANSVLEEIKKVGGEAIAVKGDVTVES----DVINLVQSAIKEFGKLDVMINNAGL 95
Query: 163 ISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSN-HAHILNISPPLNLNPFWFK 221
+ + L ++ + N G +L S++ + Y +++ ++N+S P+
Sbjct: 96 ENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLF 155
Query: 222 NHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSR- 280
H Y SK GM + +A E+ I VN + P E A S
Sbjct: 156 VH--YAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMI 213
Query: 281 ------KPEIMADAAYYILSSNPPSLTGQFLIDD 308
+PE +A A ++ SS +TG L D
Sbjct: 214 PMGYIGEPEEIAAVAAWLASSEASYVTGITLFAD 247
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/124 (21%), Positives = 52/124 (41%), Gaps = 6/124 (4%)
Query: 7 LSGLTIFITGASRXXXXXXXXXXXXXXXNIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
L G + ITG+S +V+ ++ E S +E++ GG
Sbjct: 5 LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEAN------SVLEEIKKVGGE 58
Query: 67 CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINAR 126
+ D+ E V + V +A+ +FG +D+++NNA + + L ++ + N
Sbjct: 59 AIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLT 118
Query: 127 GTYL 130
G +L
Sbjct: 119 GAFL 122
>pdb|1YDE|A Chain A, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|B Chain B, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|C Chain C, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|D Chain D, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|E Chain E, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|F Chain F, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|G Chain G, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|H Chain H, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|I Chain I, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|J Chain J, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|K Chain K, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|L Chain L, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|M Chain M, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|N Chain N, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|O Chain O, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|P Chain P, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
Length = 270
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 72/153 (47%), Gaps = 5/153 (3%)
Query: 130 LVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTAN-TPLKKYDLMNQINARGTY 188
L +Q ++++ V+ + +FG +D +VNNA T + + + ++N GTY
Sbjct: 60 LCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTY 119
Query: 189 LVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDN 248
+++ LPYL+KS +++NIS + V Y +K ++ +A +
Sbjct: 120 TLTKLALPYLRKS-QGNVINISS--LVGAIGQAQAVPYVATKGAVTAMTKALALDESPYG 176
Query: 249 IAVNALWPRTAIYTAAIEMLTGGSADAKATSRK 281
+ VN + P I+T E L D +A+ R+
Sbjct: 177 VRVNCISPGN-IWTPLWEELAALMPDPRASIRE 208
Score = 29.6 bits (65), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 71 IVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTA-NTPLKKYDLMNQINARGTY 129
+ D+ E V++ V+ + +FG +D +VNNA T + + + ++N GTY
Sbjct: 60 LCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTY 119
>pdb|1JA9|A Chain A, Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalene
Reductase In Complex With Nadph And Pyroquilon
Length = 274
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 71/166 (42%), Gaps = 12/166 (7%)
Query: 93 GIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYL-VKASQGLEIQSAVNAAVDKFG 151
G ++VN S+ + LKK + A+G + S+ E+ + + AV FG
Sbjct: 45 GASVVVNYGSSSKAAEEVVAELKK------LGAQGVAIQADISKPSEVVALFDKAVSHFG 98
Query: 152 GIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHIL-NIS 210
G+D +++N+ D + +D + +N RG + V+Q+ L + ++ + +I+
Sbjct: 99 GLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIA 158
Query: 211 PPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
+ P NH Y SK + A + + VN + P
Sbjct: 159 AVMTGIP----NHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAP 200
Score = 35.8 bits (81), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Query: 59 EVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYD 118
E++ G + DI V + + AV FGG+D +++N+ D + +D
Sbjct: 65 ELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFD 124
Query: 119 LMNQINARGTYLVKASQGLE 138
+ +N RG + V A QGL+
Sbjct: 125 KVFNLNTRGQFFV-AQQGLK 143
>pdb|1YXM|A Chain A, Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa
Reductase
pdb|1YXM|B Chain B, Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa
Reductase
pdb|1YXM|C Chain C, Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa
Reductase
pdb|1YXM|D Chain D, Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa
Reductase
Length = 303
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 57/135 (42%), Gaps = 13/135 (9%)
Query: 5 GKLSGLTIFITGASRXXXXXXXXXXXXXXXNIVIAAKTAEPHPKLPGTIYSAAKEVE--- 61
G L G +TG + N+VIA++ E + SAA E++
Sbjct: 14 GLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLE-------RLKSAADELQANL 66
Query: 62 --DAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDL 119
+P +IR+E V + V + +D FG I+ LVNN L+ + K +
Sbjct: 67 PPTKQARVIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHA 126
Query: 120 MNQINARGT-YLVKA 133
+ + N GT Y+ KA
Sbjct: 127 VLETNLTGTFYMCKA 141
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 82/204 (40%), Gaps = 14/204 (6%)
Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
E+ + V + +D FG I+ LVNN L+ + K + + + N GT+ + +
Sbjct: 86 EVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSS 145
Query: 198 LKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPR 257
K + I+NI P F V ++ G+ +A E+ I +N + P
Sbjct: 146 WMKEHGGSIVNIIVPTKAG---FPLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPG 202
Query: 258 TAIYTAAIEML-TGGSADAKATSRK--------PEIMADAAYYILSSNPPSLTGQFLIDD 308
A+E + G + + + +K PE ++ ++LS +TGQ + D
Sbjct: 203 VIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVVCFLLSPAASFITGQSVDVD 262
Query: 309 --EVLKAQHIDLEQYSYVPNGAAE 330
L ++ + P GA +
Sbjct: 263 GGRSLYTHSYEVPDHDNWPKGAGD 286
>pdb|3S55|A Chain A, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE From Mycobacterium Abscessus
Bound To Nad
pdb|3S55|B Chain B, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE From Mycobacterium Abscessus
Bound To Nad
pdb|3S55|C Chain C, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE From Mycobacterium Abscessus
Bound To Nad
pdb|3S55|D Chain D, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE From Mycobacterium Abscessus
Bound To Nad
pdb|3S55|E Chain E, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE From Mycobacterium Abscessus
Bound To Nad
pdb|3S55|F Chain F, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE From Mycobacterium Abscessus
Bound To Nad
pdb|3S55|G Chain G, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE From Mycobacterium Abscessus
Bound To Nad
pdb|3S55|H Chain H, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE From Mycobacterium Abscessus
Bound To Nad
Length = 281
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 54/119 (45%), Gaps = 4/119 (3%)
Query: 139 IQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYL 198
++S V A D GGIDI + NA ++ ++D + N GT+ P +
Sbjct: 86 LESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGM 145
Query: 199 KKSNHAHILNISPPLNLNP-FWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
K N+ I+ +S L + F ++V+ G++ CA A + G I VNA+ P
Sbjct: 146 IKRNYGRIVTVSSMLGHSANFAQASYVSSKWGVIGLTKCA---AHDLVGYGITVNAVAP 201
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 35/70 (50%)
Query: 60 VEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDL 119
VE G C+ VD++D A++S V A D GGIDI + NA ++ ++D
Sbjct: 66 VEKTGRRCISAKVDVKDRAALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDE 125
Query: 120 MNQINARGTY 129
+ N GT+
Sbjct: 126 VIGTNLTGTF 135
>pdb|1YB1|A Chain A, Crystal Structure Of Human 17-Beta-Hydroxysteroid
Dehydrogenase Type Xi
pdb|1YB1|B Chain B, Crystal Structure Of Human 17-Beta-Hydroxysteroid
Dehydrogenase Type Xi
Length = 272
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 42/83 (50%)
Query: 128 TYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGT 187
T++V S +I S+ + G + ILVNNA + +D T + + ++N
Sbjct: 84 TFVVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAH 143
Query: 188 YLVSQKCLPYLKKSNHAHILNIS 210
+ ++ LP + K+NH HI+ ++
Sbjct: 144 FWTTKAFLPAMTKNNHGHIVTVA 166
>pdb|3ASU|A Chain A, Crystal Structure Of Serine Dehydrogenase From Escherichia
Coli
pdb|3ASU|B Chain B, Crystal Structure Of Serine Dehydrogenase From Escherichia
Coli
pdb|3ASV|A Chain A, The Closed Form Of Serine Dehydrogenase Complexed With
Nadp+
pdb|3ASV|B Chain B, The Closed Form Of Serine Dehydrogenase Complexed With
Nadp+
pdb|3ASV|C Chain C, The Closed Form Of Serine Dehydrogenase Complexed With
Nadp+
pdb|3ASV|D Chain D, The Closed Form Of Serine Dehydrogenase Complexed With
Nadp+
pdb|3ASV|E Chain E, The Closed Form Of Serine Dehydrogenase Complexed With
Nadp+
pdb|3ASV|F Chain F, The Closed Form Of Serine Dehydrogenase Complexed With
Nadp+
Length = 248
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 49/105 (46%), Gaps = 3/105 (2%)
Query: 153 IDILVNNAS-AISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISP 211
IDILVNNA A+ + ++ ++ M N +G +++ LP + + NH HI+NI
Sbjct: 75 IDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGS 134
Query: 212 PLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
P+ N Y +K + +L + + G + V + P
Sbjct: 135 TAGSWPYAGGN--VYGATKAFVRQFSLNLRTDLHGTAVRVTDIEP 177
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 58 KEVEDA-GGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNAS-AISLTDTANTPLK 115
+E++D G N +D+R+ A++ + + ++ IDILVNNA A+ + ++
Sbjct: 38 QELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVE 97
Query: 116 KYDLMNQINARG-TYLVKA 133
++ M N +G Y+ +A
Sbjct: 98 DWETMIDTNNKGLVYMTRA 116
>pdb|1CYD|A Chain A, Carbonyl Reductase Complexed With Nadph And 2-Propanol
pdb|1CYD|B Chain B, Carbonyl Reductase Complexed With Nadph And 2-Propanol
pdb|1CYD|C Chain C, Carbonyl Reductase Complexed With Nadph And 2-Propanol
pdb|1CYD|D Chain D, Carbonyl Reductase Complexed With Nadph And 2-Propanol
Length = 244
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 77/179 (43%), Gaps = 18/179 (10%)
Query: 142 AVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKC-LPYLKK 200
A A+ G +D+LVNNA+ + + + +D +N R + VSQ + +
Sbjct: 66 ATEKALGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINR 125
Query: 201 SNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPRTAI 260
I+N+S + F N + Y+ +K M+M MA E I VN++ P T +
Sbjct: 126 GVPGSIVNVSS--MVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNP-TVV 182
Query: 261 YTAAIEMLTGGSAD----AKATSRKP-------EIMADAAYYILSSNPPSLTGQFLIDD 308
T +M SAD K R P E + ++ ++LS S +G ++ D
Sbjct: 183 LT---DMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILFLLSDRSASTSGGGILVD 238
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 46/125 (36%), Gaps = 15/125 (12%)
Query: 7 LSGLTIFITGASRXXXXXXXXXXXXXXXNIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
SGL +TGA + +V +T + S AKE
Sbjct: 5 FSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNS-------DLVSLAKECP----G 53
Query: 67 CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINAR 126
P VD+ D A + A+ G +D+LVNNA+ + + + +D +N R
Sbjct: 54 IEPVCVDLGDWDATEKALGG----IGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLR 109
Query: 127 GTYLV 131
+ V
Sbjct: 110 SVFQV 114
>pdb|3TZK|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(G92a) From Vibrio Cholerae
pdb|3TZK|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(G92a) From Vibrio Cholerae
Length = 251
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 50/118 (42%), Gaps = 2/118 (1%)
Query: 139 IQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYL 198
I++ + A D+FGG+DILVNNA+ +++ + + N + +S+ L +
Sbjct: 73 IEAVLKAITDEFGGVDILVNNAAITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGM 132
Query: 199 KKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
K I+N+ + Y +K G+ MA E + VN + P
Sbjct: 133 MKKRQGRIINVGSV--VGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAP 188
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 47/99 (47%), Gaps = 16/99 (16%)
Query: 7 LSGLTIFITGASRXXXXXXXXXXXXXXXNIVIAAKTAEPHPKLPGTIYS--AAKEVED-A 63
L G +TGASR IA AE K+ GT S A+ + D
Sbjct: 10 LEGKVALVTGASRGIGK-------------AIAELLAERGAKVIGTATSESGAQAISDYL 56
Query: 64 GGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNAS 102
G N +++ + ++++ + A D+FGG+DILVNNA+
Sbjct: 57 GDNGKGMALNVTNPESIEAVLKAITDEFGGVDILVNNAA 95
>pdb|3RIH|A Chain A, Crystal Structure Of A Putative Short Chain Dehydrogenase
Or Reductase From Mycobacterium Abscessus
pdb|3RIH|B Chain B, Crystal Structure Of A Putative Short Chain Dehydrogenase
Or Reductase From Mycobacterium Abscessus
pdb|3RIH|C Chain C, Crystal Structure Of A Putative Short Chain Dehydrogenase
Or Reductase From Mycobacterium Abscessus
pdb|3RIH|D Chain D, Crystal Structure Of A Putative Short Chain Dehydrogenase
Or Reductase From Mycobacterium Abscessus
Length = 293
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 59/136 (43%), Gaps = 21/136 (15%)
Query: 142 AVNAAVDKFGGIDILVNNASAI--SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLK 199
A VD FG +D++ NA + DT TP + ++++ +N +GT Q CL L
Sbjct: 109 AARTVVDAFGALDVVCANAGIFPEARLDTM-TPEQLSEVLD-VNVKGTVYTVQACLAPLT 166
Query: 200 KSNHAHIL---NISPPLNLNPFWFKNHVAYTISKYGMSMCA-LGM----AEEFKGDNIAV 251
S ++ +I+ P+ P W S YG S A LG A E + V
Sbjct: 167 ASGRGRVILTSSITGPVTGYPGW---------SHYGASKAAQLGFMRTAAIELAPRGVTV 217
Query: 252 NALWPRTAIYTAAIEM 267
NA+ P + ++M
Sbjct: 218 NAILPGNILTEGLVDM 233
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 61/131 (46%), Gaps = 13/131 (9%)
Query: 7 LSGLTIFITGASRXXXXXXXXXXXXXXXNIVIAAKTAEPHPKLPGTIYSAAKEVEDAG-G 65
LS ++ +TG ++ N+ +AA++ P + S E+ + G G
Sbjct: 39 LSARSVLVTGGTKGIGRGIATVFARAGANVAVAARS-------PRELSSVTAELGELGAG 91
Query: 66 NCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAI--SLTDTANTPLKKYDLMNQI 123
N + +D+ D + A VD FG +D++ NA + DT TP + ++++ +
Sbjct: 92 NVIGVRLDVSDPGSCADAARTVVDAFGALDVVCANAGIFPEARLDTM-TPEQLSEVLD-V 149
Query: 124 NARGT-YLVKA 133
N +GT Y V+A
Sbjct: 150 NVKGTVYTVQA 160
>pdb|1GEG|A Chain A, Cryatal Structure Analysis Of Meso-2,3-Butanediol
Dehydrogenase
pdb|1GEG|B Chain B, Cryatal Structure Analysis Of Meso-2,3-Butanediol
Dehydrogenase
pdb|1GEG|C Chain C, Cryatal Structure Analysis Of Meso-2,3-Butanediol
Dehydrogenase
pdb|1GEG|D Chain D, Cryatal Structure Analysis Of Meso-2,3-Butanediol
Dehydrogenase
pdb|1GEG|E Chain E, Cryatal Structure Analysis Of Meso-2,3-Butanediol
Dehydrogenase
pdb|1GEG|F Chain F, Cryatal Structure Analysis Of Meso-2,3-Butanediol
Dehydrogenase
pdb|1GEG|G Chain G, Cryatal Structure Analysis Of Meso-2,3-Butanediol
Dehydrogenase
pdb|1GEG|H Chain H, Cryatal Structure Analysis Of Meso-2,3-Butanediol
Dehydrogenase
Length = 256
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 7/94 (7%)
Query: 52 TIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTAN 111
T + A E+ AGG+ + VD+ D V +AV A GG D++VNNA T +
Sbjct: 38 TAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIES 97
Query: 112 TPLKKYDLMNQINARGTYLVKASQGLEIQSAVNA 145
+ D + IN +G IQ+AV A
Sbjct: 98 ITPEIVDKVYNINVKGVI-------WGIQAAVEA 124
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 97/238 (40%), Gaps = 35/238 (14%)
Query: 97 LVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDK----FGG 152
LV + A+++ D + K + ++IN G + V + + V AAV++ GG
Sbjct: 22 LVKDGFAVAIADYNDATAKA--VASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGG 79
Query: 153 IDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPP 212
D++VNNA T + + D + IN +G Q + KK H +
Sbjct: 80 FDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKI----- 134
Query: 213 LNLNPFWFKNHVA------YTISKYGMSMCALGMAEEFKGDNIAVNALWP---RTAIYT- 262
+N HV Y+ SK+ + A + I VN P +T ++
Sbjct: 135 --INACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAE 192
Query: 263 -------AAIEMLTGGSAD-AKATS----RKPEIMADAAYYILSSNPPSLTGQFLIDD 308
AA + L G+A+ AK + +PE +A Y+ S + +TGQ L+ D
Sbjct: 193 IDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLASPDSDYMTGQSLLID 250
>pdb|1SPX|A Chain A, Crystal Structure Of Glucose Dehydrogenase Of
Caenorhabditis Elegans In The Apo-Form
Length = 278
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 57/117 (48%), Gaps = 16/117 (13%)
Query: 149 KFGGIDILVNNASAI-----SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNH 203
KFG +DILVNNA A S T TA + ++ YD +N R +++K +P+L S
Sbjct: 83 KFGKLDILVNNAGAAIPDSQSKTGTAQS-IESYDATLNLNLRSVIALTKKAVPHL-SSTK 140
Query: 204 AHILNIS---PPLNLNP-FWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
I+NIS L+ P F + Y+I+K + A + I VN++ P
Sbjct: 141 GEIVNISSIASGLHATPDFPY-----YSIAKAAIDQYTRNTAIDLIQHGIRVNSISP 192
Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 6/66 (9%)
Query: 66 NCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAI-----SLTDTANTPLKKYDLM 120
N + D+ + ++ + KFG +DILVNNA A S T TA + ++ YD
Sbjct: 59 NVNSVVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQS-IESYDAT 117
Query: 121 NQINAR 126
+N R
Sbjct: 118 LNLNLR 123
>pdb|1XHL|A Chain A, Crystal Structure Of Putative Tropinone Reductase-Ii From
Caenorhabditis Elegans With Cofactor And Substrate
pdb|1XHL|B Chain B, Crystal Structure Of Putative Tropinone Reductase-Ii From
Caenorhabditis Elegans With Cofactor And Substrate
Length = 297
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 74/166 (44%), Gaps = 7/166 (4%)
Query: 93 GIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGG 152
G + + + L +T LK +INA + +AS +I +N + KFG
Sbjct: 50 GAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDI---INTTLAKFGK 106
Query: 153 IDILVNNASAISLTDTANT--PLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNIS 210
IDILVNNA A TANT P++ Y ++N + ++QK +L K+ I+N+S
Sbjct: 107 IDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVS 165
Query: 211 PPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
+ P + Y +K + A + + VN++ P
Sbjct: 166 -SIVAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSP 210
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 48/121 (39%), Gaps = 6/121 (4%)
Query: 6 KLSGLTIFITGASRXXXXXXXXXXXXXXXNIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
+ SG ++ ITG+S + I + + + I A E
Sbjct: 23 RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINA 82
Query: 66 NCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANT--PLKKYDLMNQI 123
+ D+ + +N + KFG IDILVNNA A TANT P++ Y ++
Sbjct: 83 ----VVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKL 138
Query: 124 N 124
N
Sbjct: 139 N 139
>pdb|3RSH|A Chain A, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase
(Fabg) From Vibrio Cholerae O1 Complexed With Nadp+
(Space Group P62)
pdb|3RSH|B Chain B, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase
(Fabg) From Vibrio Cholerae O1 Complexed With Nadp+
(Space Group P62)
pdb|3RRO|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg) From Vibrio Cholerae
pdb|3RRO|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg) From Vibrio Cholerae
pdb|4I08|A Chain A, Crystal Structure Of Beta-Ketoacyl-Acyl Carrier Protein
Reductase (Fabg) From Vibrio Cholerae In Complex With
Nadph
pdb|4I08|B Chain B, Crystal Structure Of Beta-Ketoacyl-Acyl Carrier Protein
Reductase (Fabg) From Vibrio Cholerae In Complex With
Nadph
Length = 251
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 49/118 (41%), Gaps = 2/118 (1%)
Query: 139 IQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYL 198
I++ + A D+FGG+DILVNNA +++ + + N + +S+ L +
Sbjct: 73 IEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGM 132
Query: 199 KKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
K I+N+ + Y +K G+ MA E + VN + P
Sbjct: 133 MKKRQGRIINVGSV--VGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAP 188
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 16/98 (16%)
Query: 7 LSGLTIFITGASRXXXXXXXXXXXXXXXNIVIAAKTAEPHPKLPGTIYS--AAKEVED-A 63
L G +TGASR IA AE K+ GT S A+ + D
Sbjct: 10 LEGKVALVTGASRGIGK-------------AIAELLAERGAKVIGTATSESGAQAISDYL 56
Query: 64 GGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
G N +++ + ++++ + A D+FGG+DILVNNA
Sbjct: 57 GDNGKGMALNVTNPESIEAVLKAITDEFGGVDILVNNA 94
>pdb|3TZH|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(F187a) From Vibrio Cholerae
pdb|3TZH|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(F187a) From Vibrio Cholerae
pdb|3TZH|C Chain C, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(F187a) From Vibrio Cholerae
pdb|3TZH|D Chain D, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(F187a) From Vibrio Cholerae
pdb|3TZH|E Chain E, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(F187a) From Vibrio Cholerae
pdb|3TZH|F Chain F, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(F187a) From Vibrio Cholerae
Length = 251
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 49/118 (41%), Gaps = 2/118 (1%)
Query: 139 IQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYL 198
I++ + A D+FGG+DILVNNA +++ + + N + +S+ L +
Sbjct: 73 IEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGM 132
Query: 199 KKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
K I+N+ + Y +K G+ MA E + VN + P
Sbjct: 133 MKKRQGRIINVGSV--VGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAP 188
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 16/98 (16%)
Query: 7 LSGLTIFITGASRXXXXXXXXXXXXXXXNIVIAAKTAEPHPKLPGTIYS--AAKEVED-A 63
L G +TGASR IA AE K+ GT S A+ + D
Sbjct: 10 LEGKVALVTGASRGIGK-------------AIAELLAERGAKVIGTATSESGAQAISDYL 56
Query: 64 GGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
G N +++ + ++++ + A D+FGG+DILVNNA
Sbjct: 57 GDNGKGMALNVTNPESIEAVLKAITDEFGGVDILVNNA 94
>pdb|3U09|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(G92d) From Vibrio Cholerae
pdb|3U09|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(G92d) From Vibrio Cholerae
Length = 251
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 49/118 (41%), Gaps = 2/118 (1%)
Query: 139 IQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYL 198
I++ + A D+FGG+DILVNNA +++ + + N + +S+ L +
Sbjct: 73 IEAVLKAITDEFGGVDILVNNADITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGM 132
Query: 199 KKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
K I+N+ + Y +K G+ MA E + VN + P
Sbjct: 133 MKKRQGRIINVGSV--VGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAP 188
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 16/98 (16%)
Query: 7 LSGLTIFITGASRXXXXXXXXXXXXXXXNIVIAAKTAEPHPKLPGTIYS--AAKEVED-A 63
L G +TGASR IA AE K+ GT S A+ + D
Sbjct: 10 LEGKVALVTGASRGIGK-------------AIAELLAERGAKVIGTATSESGAQAISDYL 56
Query: 64 GGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
G N +++ + ++++ + A D+FGG+DILVNNA
Sbjct: 57 GDNGKGMALNVTNPESIEAVLKAITDEFGGVDILVNNA 94
>pdb|1AE1|A Chain A, Tropinone Reductase-I Complex With Nadp
pdb|1AE1|B Chain B, Tropinone Reductase-I Complex With Nadp
Length = 273
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 2/106 (1%)
Query: 151 GGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNIS 210
G ++ILVNNA + + + K Y+++ N Y +SQ P LK S + +++ +S
Sbjct: 98 GKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLS 157
Query: 211 PPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
+ + Y+ SK ++ +A E+ DNI VN++ P
Sbjct: 158 SIAGFSA--LPSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAP 201
>pdb|3T7C|A Chain A, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Avium Bound To Nad
pdb|3T7C|B Chain B, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Avium Bound To Nad
pdb|3T7C|C Chain C, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Avium Bound To Nad
pdb|3T7C|D Chain D, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Avium Bound To Nad
Length = 299
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 50/106 (47%), Gaps = 5/106 (4%)
Query: 5 GKLSGLTIFITGASRXXXXXXXXXXXXXXXNIV-IAAKTAEPHPKLPGT----IYSAAKE 59
GK+ G FITGA+R +I+ I KLP + + ++
Sbjct: 24 GKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQ 83
Query: 60 VEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAIS 105
VE G + VD+RD A+Q+AV+ V + G +DI++ NA+ S
Sbjct: 84 VEALGRRIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALAS 129
Score = 36.6 bits (83), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 66/151 (43%), Gaps = 6/151 (3%)
Query: 111 NTPLKKYDLMNQINARGTYLVKASQGLE----IQSAVNAAVDKFGGIDILVNNASAISLT 166
+TP + + Q+ A G ++ + + +Q+AV+ V + G +DI++ NA+ S
Sbjct: 72 STPDDLAETVRQVEALGRRIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEG 131
Query: 167 DTANT-PLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVA 225
N K + M +N G ++ ++ +P++ + + + +N
Sbjct: 132 TRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIG-GLRGAENIGN 190
Query: 226 YTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
Y SK+G+ MA E NI VN + P
Sbjct: 191 YIASKHGLHGLMRTMALELGPRNIRVNIVCP 221
>pdb|2ZK7|A Chain A, Structure Of A C-Terminal Deletion Mutant Of Thermoplasma
Acidophilum Aldohexose Dehydrogenase (Aldt)
pdb|2ZK7|B Chain B, Structure Of A C-Terminal Deletion Mutant Of Thermoplasma
Acidophilum Aldohexose Dehydrogenase (Aldt)
Length = 257
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 59/124 (47%), Gaps = 9/124 (7%)
Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
+++++++ ++G I +LVNNA S + + ++ + +N G Y S+ +PY
Sbjct: 67 QVKASIDHIFKEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPY 126
Query: 198 LKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDN---IAVNAL 254
+ +S I+NIS KN AY SK+ + +G+ + D + NA+
Sbjct: 127 MIRSRDPSIVNISSV--QASIITKNASAYVTSKHAV----IGLTKSIALDYAPLLRCNAV 180
Query: 255 WPRT 258
P T
Sbjct: 181 CPAT 184
>pdb|2DTD|A Chain A, Structure Of Thermoplasma Acidophilum Aldohexose
Dehydrogenase (aldt) In Ligand-free Form
pdb|2DTD|B Chain B, Structure Of Thermoplasma Acidophilum Aldohexose
Dehydrogenase (aldt) In Ligand-free Form
pdb|2DTE|A Chain A, Structure Of Thermoplasma Acidophilum Aldohexose
Dehydrogenase (Aldt) In Complex With Nadh
pdb|2DTE|B Chain B, Structure Of Thermoplasma Acidophilum Aldohexose
Dehydrogenase (Aldt) In Complex With Nadh
pdb|2DTX|A Chain A, Structure Of Thermoplasma Acidophilum Aldohexose
Dehydrogenase (Aldt) In Complex With D-Mannose
pdb|2DTX|B Chain B, Structure Of Thermoplasma Acidophilum Aldohexose
Dehydrogenase (Aldt) In Complex With D-Mannose
Length = 264
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 59/124 (47%), Gaps = 9/124 (7%)
Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
+++++++ ++G I +LVNNA S + + ++ + +N G Y S+ +PY
Sbjct: 60 QVKASIDHIFKEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPY 119
Query: 198 LKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDN---IAVNAL 254
+ +S I+NIS KN AY SK+ + +G+ + D + NA+
Sbjct: 120 MIRSRDPSIVNISS--VQASIITKNASAYVTSKHAV----IGLTKSIALDYAPLLRCNAV 173
Query: 255 WPRT 258
P T
Sbjct: 174 CPAT 177
>pdb|4E3Z|A Chain A, Crystal Structure Of A Oxidoreductase From Rhizobium Etli
Cfn 42
pdb|4E3Z|B Chain B, Crystal Structure Of A Oxidoreductase From Rhizobium Etli
Cfn 42
Length = 272
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 77/178 (43%), Gaps = 24/178 (13%)
Query: 145 AAVDK-FGGIDILVNNASAISLTDTAN-TPLKKYDLMNQINARGTYLVSQKCL---PYLK 199
+AVD+ FG +D LVNNA + + +++ + ++N G+ L + + + L
Sbjct: 96 SAVDRQFGRLDGLVNNAGIVDYPQRVDEXSVERIERXLRVNVTGSILCAAEAVRRXSRLY 155
Query: 200 KSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPRTA 259
I+N+S + + +V Y SK + +G+A E + I VNA+ P
Sbjct: 156 SGQGGAIVNVSSXAAILGSATQ-YVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRP--- 211
Query: 260 IYTAAIEM---LTGGSADA---------KATSRKPEIMADAAYYILSSNPPSLTGQFL 305
IE +GG D + PE +ADA Y+LS + +TG L
Sbjct: 212 ---GIIETDLHASGGLPDRAREXAPSVPXQRAGXPEEVADAILYLLSPSASYVTGSIL 266
>pdb|4GKB|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase Homolog
(Target Efi- 505321) From Burkholderia Multivorans,
Unliganded Structure
pdb|4GKB|B Chain B, Crystal Structure Of A Short Chain Dehydrogenase Homolog
(Target Efi- 505321) From Burkholderia Multivorans,
Unliganded Structure
pdb|4GKB|C Chain C, Crystal Structure Of A Short Chain Dehydrogenase Homolog
(Target Efi- 505321) From Burkholderia Multivorans,
Unliganded Structure
pdb|4GKB|D Chain D, Crystal Structure Of A Short Chain Dehydrogenase Homolog
(Target Efi- 505321) From Burkholderia Multivorans,
Unliganded Structure
pdb|4GLO|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase Homolog
(Target Efi- 505321) From Burkholderia Multivorans, With
Bound Nad
pdb|4GLO|B Chain B, Crystal Structure Of A Short Chain Dehydrogenase Homolog
(Target Efi- 505321) From Burkholderia Multivorans, With
Bound Nad
pdb|4GLO|C Chain C, Crystal Structure Of A Short Chain Dehydrogenase Homolog
(Target Efi- 505321) From Burkholderia Multivorans, With
Bound Nad
pdb|4GLO|D Chain D, Crystal Structure Of A Short Chain Dehydrogenase Homolog
(Target Efi- 505321) From Burkholderia Multivorans, With
Bound Nad
pdb|4GVX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase Homolog
(Target Efi- 505321) From Burkholderia Multivorans, With
Bound Nadp And L-Fucose
pdb|4GVX|B Chain B, Crystal Structure Of A Short Chain Dehydrogenase Homolog
(Target Efi- 505321) From Burkholderia Multivorans, With
Bound Nadp And L-Fucose
pdb|4GVX|C Chain C, Crystal Structure Of A Short Chain Dehydrogenase Homolog
(Target Efi- 505321) From Burkholderia Multivorans, With
Bound Nadp And L-Fucose
pdb|4GVX|D Chain D, Crystal Structure Of A Short Chain Dehydrogenase Homolog
(Target Efi- 505321) From Burkholderia Multivorans, With
Bound Nadp And L-Fucose
Length = 258
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 81/207 (39%), Gaps = 23/207 (11%)
Query: 118 DLMNQINARGTYL-VKASQGLEIQSAVNAAVDKFGGIDILVNNA---SAISLTDTANTPL 173
D + Q R TYL V+ + + AV + FG +D LVNNA I L D
Sbjct: 48 DALAQRQPRATYLPVELQDDAQCRDAVAQTIATFGRLDGLVNNAGVNDGIGL-DAGRDAF 106
Query: 174 KKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGM 233
N I+ Y ++ C+P+LK + A I+NIS + N Y SK
Sbjct: 107 VASLERNLIH---YYAMAHYCVPHLKATRGA-IVNISSKTAVTGQ--GNTSGYCASKGAQ 160
Query: 234 SMCALGMAEEFKGDNIAVNALWP---RTAIYTAAIEMLTGGSADAKATSRK--------- 281
A + + VNA+ P T +Y I A + K
Sbjct: 161 LALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPLGRRFTT 220
Query: 282 PEIMADAAYYILSSNPPSLTGQFLIDD 308
P+ +AD A ++LS TG++L D
Sbjct: 221 PDEIADTAVFLLSPRASHTTGEWLFVD 247
>pdb|3CSD|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To
Nadph And The Inhibitor Emodin
pdb|3CSD|A Chain A, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To
Nadph And The Inhibitor Emodin
pdb|3QRW|A Chain A, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To
Nadph
pdb|3QRW|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To
Nadph
pdb|3RI3|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To
Nadph And The Inhibitor Emodin
pdb|3RI3|A Chain A, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To
Nadph And The Inhibitor Emodin
Length = 281
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 58/122 (47%), Gaps = 6/122 (4%)
Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
EI++ V A V+++G +D+LVNNA + TA + + + + N G + V+++ L
Sbjct: 89 EIEALVAAVVERYGPVDVLVNNAGRLGGGATAELADELWLDVVETNLTGVFRVTKQVLKA 148
Query: 198 --LKKSNHAHILNISPPLNLNPFWFKNHVA-YTISKYGMSMCALGMAEEFKGDNIAVNAL 254
+ + I+NI+ H A Y+ SK+G+ + E I VNA+
Sbjct: 149 GGMLERGTGRIVNIASTGGKQGVV---HAAPYSASKHGVVGFTKALGLELARTGITVNAV 205
Query: 255 WP 256
P
Sbjct: 206 CP 207
Score = 35.4 bits (80), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 38/74 (51%)
Query: 58 KEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKY 117
KE+ +AG D+R +++ V A V+++G +D+LVNNA + TA + +
Sbjct: 68 KELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRLGGGATAELADELW 127
Query: 118 DLMNQINARGTYLV 131
+ + N G + V
Sbjct: 128 LDVVETNLTGVFRV 141
>pdb|2RHR|B Chain B, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And
Inhibitor Emodin
pdb|2RHR|A Chain A, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And
Inhibitor Emodin
Length = 277
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 58/122 (47%), Gaps = 6/122 (4%)
Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
EI++ V A V+++G +D+LVNNA + TA + + + + N G + V+++ L
Sbjct: 85 EIEALVAAVVERYGPVDVLVNNAGRLGGGATAELADELWLDVVETNLTGVFRVTKQVLKA 144
Query: 198 --LKKSNHAHILNISPPLNLNPFWFKNHVA-YTISKYGMSMCALGMAEEFKGDNIAVNAL 254
+ + I+NI+ H A Y+ SK+G+ + E I VNA+
Sbjct: 145 GGMLERGTGRIVNIASTGGKQGVV---HAAPYSASKHGVVGFTKALGLELARTGITVNAV 201
Query: 255 WP 256
P
Sbjct: 202 CP 203
Score = 35.4 bits (80), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 38/74 (51%)
Query: 58 KEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKY 117
KE+ +AG D+R +++ V A V+++G +D+LVNNA + TA + +
Sbjct: 64 KELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRLGGGATAELADELW 123
Query: 118 DLMNQINARGTYLV 131
+ + N G + V
Sbjct: 124 LDVVETNLTGVFRV 137
>pdb|3IS3|A Chain A, Crystal Structure Of 17beta-Hydroxysteroid Dehydrogenase
(Apo Form) From Fungus Cochliobolus Lunatus
pdb|3QWF|A Chain A, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus
pdb|3QWF|B Chain B, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus
pdb|3QWF|C Chain C, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus
pdb|3QWF|D Chain D, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus
pdb|3QWF|E Chain E, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus
pdb|3QWF|F Chain F, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus
pdb|3QWF|G Chain G, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus
pdb|3QWF|H Chain H, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus
pdb|3QWI|A Chain A, Crystal Structure Of A 17beta-Hydroxysteroid Dehydrogenase
(Holo Form) From Fungus Cochliobolus Lunatus In Complex
With Nadph And Coumestrol
pdb|3QWI|B Chain B, Crystal Structure Of A 17beta-Hydroxysteroid Dehydrogenase
(Holo Form) From Fungus Cochliobolus Lunatus In Complex
With Nadph And Coumestrol
pdb|3QWI|C Chain C, Crystal Structure Of A 17beta-Hydroxysteroid Dehydrogenase
(Holo Form) From Fungus Cochliobolus Lunatus In Complex
With Nadph And Coumestrol
pdb|3QWI|D Chain D, Crystal Structure Of A 17beta-Hydroxysteroid Dehydrogenase
(Holo Form) From Fungus Cochliobolus Lunatus In Complex
With Nadph And Coumestrol
pdb|3QWH|A Chain A, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus In Complex With
Nadph And Kaempferol
pdb|3QWH|B Chain B, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus In Complex With
Nadph And Kaempferol
pdb|3QWH|C Chain C, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus In Complex With
Nadph And Kaempferol
pdb|3QWH|D Chain D, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus In Complex With
Nadph And Kaempferol
Length = 270
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 70/155 (45%), Gaps = 7/155 (4%)
Query: 106 LTDTANTPLKKYDLMNQINARGT--YLVKAS--QGLEIQSAVNAAVDKFGGIDILVNNAS 161
+ + AN+ ++++I A G+ +KA Q EI + AV FG +DI V+N+
Sbjct: 46 VVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFGHLDIAVSNSG 105
Query: 162 AISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFK 221
+S + +++D + +N RG + V+++ +L + + ++ F
Sbjct: 106 VVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGR---IVLTSSNTSKDFSVP 162
Query: 222 NHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
H Y+ SK + +++ I VNA+ P
Sbjct: 163 KHSLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAP 197
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/131 (22%), Positives = 52/131 (39%), Gaps = 14/131 (10%)
Query: 5 GKLSGLTIFITGASRXXXXXXXXXXXXXXXNIVI----AAKTAEPHPKLPGTIYSAAKEV 60
G+L G +TG+ R +V+ + K AE E+
Sbjct: 14 GRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAE----------KVVSEI 63
Query: 61 EDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLM 120
+ G + + DIR + + AV FG +DI V+N+ +S + +++D +
Sbjct: 64 KALGSDAIAIKADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRV 123
Query: 121 NQINARGTYLV 131
+N RG + V
Sbjct: 124 FSLNTRGQFFV 134
>pdb|4E6P|A Chain A, Crystal Structure Of A Probable Sorbitol Dehydrogenase
(Target Psi- 012078) From Sinorhizobium Meliloti 1021
pdb|4E6P|B Chain B, Crystal Structure Of A Probable Sorbitol Dehydrogenase
(Target Psi- 012078) From Sinorhizobium Meliloti 1021
pdb|4E6P|C Chain C, Crystal Structure Of A Probable Sorbitol Dehydrogenase
(Target Psi- 012078) From Sinorhizobium Meliloti 1021
pdb|4E6P|D Chain D, Crystal Structure Of A Probable Sorbitol Dehydrogenase
(Target Psi- 012078) From Sinorhizobium Meliloti 1021
Length = 259
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 51/123 (41%), Gaps = 10/123 (8%)
Query: 6 KLSGLTIFITGASRXXXXXXXXXXXXXXXNIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
+L G + ITG++R + IA E + I AA V+
Sbjct: 5 RLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQ---- 60
Query: 66 NCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINA 125
D+ + ++ +A+ A V+ GG+DILVNNA+ L + Y+ + IN
Sbjct: 61 ------XDVTRQDSIDAAIAATVEHAGGLDILVNNAALFDLAPIVEITRESYEKLFAINV 114
Query: 126 RGT 128
GT
Sbjct: 115 AGT 117
Score = 35.8 bits (81), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%)
Query: 139 IQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGT 187
I +A+ A V+ GG+DILVNNA+ L + Y+ + IN GT
Sbjct: 69 IDAAIAATVEHAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGT 117
>pdb|3TZC|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(Y155f) From Vibrio Cholerae
pdb|3TZC|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(Y155f) From Vibrio Cholerae
pdb|3TZC|C Chain C, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(Y155f) From Vibrio Cholerae
pdb|3TZC|D Chain D, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(Y155f) From Vibrio Cholerae
Length = 251
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 49/118 (41%), Gaps = 2/118 (1%)
Query: 139 IQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYL 198
I++ + A D+FGG+DILVNNA +++ + + N + +S+ L +
Sbjct: 73 IEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGM 132
Query: 199 KKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
K I+N+ + + +K G+ MA E + VN + P
Sbjct: 133 MKKRQGRIINVGSV--VGTMGNAGQANFAAAKAGVIGFTKSMAREVASRGVTVNTVAP 188
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 16/98 (16%)
Query: 7 LSGLTIFITGASRXXXXXXXXXXXXXXXNIVIAAKTAEPHPKLPGTIYS--AAKEVED-A 63
L G +TGASR IA AE K+ GT S A+ + D
Sbjct: 10 LEGKVALVTGASRGIGK-------------AIAELLAERGAKVIGTATSESGAQAISDYL 56
Query: 64 GGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
G N +++ + ++++ + A D+FGG+DILVNNA
Sbjct: 57 GDNGKGMALNVTNPESIEAVLKAITDEFGGVDILVNNA 94
>pdb|1XQ1|A Chain A, X-Ray Structure Of Putative Tropinone Reducatse From
Arabidopsis Thaliana Gene At1g07440
pdb|2Q45|A Chain A, Ensemble Refinement Of The Protein Crystal Structure Of
Putative Tropinone Reductase From Arabidopsis Thaliana
Gene At1g07440
Length = 266
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 75/186 (40%), Gaps = 16/186 (8%)
Query: 150 FGG-IDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILN 208
FGG +DIL+NN AI T + + + N Y +SQ P LK S +I+
Sbjct: 89 FGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIF 148
Query: 209 ISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPRTAIYTAAIEML 268
+S + + Y+ +K ++ A +A E+ D I NA+ P I T E +
Sbjct: 149 MSSIAGVVSASVGS--IYSATKGALNQLARNLACEWASDGIRANAVAP-AVIATPLAEAV 205
Query: 269 TGGSADAKATSRK-------PEIMADAAYYILSSNPPSLTGQFLIDDEVLKAQHIDLEQY 321
SRK PE ++ ++ +TGQ + D L + +
Sbjct: 206 YDDEFKKVVISRKPLGRFGEPEEVSSLVAFLCMPAASYITGQTICVDGGLT-----VNGF 260
Query: 322 SYVPNG 327
SY P G
Sbjct: 261 SYQPQG 266
>pdb|3ITD|A Chain A, Crystal Structure Of An Inactive 17beta-Hydroxysteroid
Dehydrogenase (Y167f Mutated Form) From Fungus
Cochliobolus Lunatus
Length = 270
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/131 (22%), Positives = 52/131 (39%), Gaps = 14/131 (10%)
Query: 5 GKLSGLTIFITGASRXXXXXXXXXXXXXXXNIVI----AAKTAEPHPKLPGTIYSAAKEV 60
G+L G +TG+ R +V+ + K AE E+
Sbjct: 14 GRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAE----------KVVSEI 63
Query: 61 EDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLM 120
+ G + + DIR + + AV FG +DI V+N+ +S + +++D +
Sbjct: 64 KALGSDAIAIKADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRV 123
Query: 121 NQINARGTYLV 131
+N RG + V
Sbjct: 124 FSLNTRGQFFV 134
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 70/155 (45%), Gaps = 7/155 (4%)
Query: 106 LTDTANTPLKKYDLMNQINARGT--YLVKAS--QGLEIQSAVNAAVDKFGGIDILVNNAS 161
+ + AN+ ++++I A G+ +KA Q EI + AV FG +DI V+N+
Sbjct: 46 VVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFGHLDIAVSNSG 105
Query: 162 AISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFK 221
+S + +++D + +N RG + V+++ +L + + ++ F
Sbjct: 106 VVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGR---IVLTSSNTSKDFSVP 162
Query: 222 NHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
H ++ SK + +++ I VNA+ P
Sbjct: 163 KHSLFSGSKGAVDSFVRIFSKDCGDKKITVNAVAP 197
>pdb|1N5D|A Chain A, Crystal Structure Of Porcine Testicular Carbonyl Reductase
20beta-Hydroxysteroid Dehydrogenase
Length = 288
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 93/225 (41%), Gaps = 66/225 (29%)
Query: 149 KFGGIDILVNNASAISLTDTANTPLK-KYDLMNQINARGTYLVSQKCLPYLKKSNHAHIL 207
++GG+D+LVNNA AI+ TP + +L + N GT V + LP +K ++
Sbjct: 79 EYGGLDVLVNNA-AIAFQLDNPTPFHIQAELTMKTNFMGTRNVCTELLPLIKP--QGRVV 135
Query: 208 NI------------SPPLN----------------LNPFW--FKNHV---------AYTI 228
N+ SP L +N F KN V Y +
Sbjct: 136 NVSSTEGVRALNECSPELQQKFKSETITEEELVGLMNKFVEDTKNGVHRKEGWSDSTYGV 195
Query: 229 SKYGMSMC----ALGMAEEFKGDNIAVNAL---WPRTAIYTAAIEMLTGGSADAKATSRK 281
+K G+S+ A + E+ GD I +NA W RT + GG K+
Sbjct: 196 TKIGVSVLSRIYARKLREQRAGDKILLNACCPGWVRTDM---------GGPKAPKS---- 242
Query: 282 PEIMADAAYY--ILSSNPPSLTGQFLIDDEVLKAQHIDLEQYSYV 324
PE+ A+ Y +L S+ GQF+ D +V++ + E Y +V
Sbjct: 243 PEVGAETPVYLALLPSDAEGPHGQFVTDKKVVE-WGVPPESYPWV 286
>pdb|2JAH|A Chain A, Biochemical And Structural Analysis Of The Clavulanic Acid
Dehydeogenase (Cad) From Streptomyces Clavuligerus
pdb|2JAH|B Chain B, Biochemical And Structural Analysis Of The Clavulanic Acid
Dehydeogenase (Cad) From Streptomyces Clavuligerus
pdb|2JAH|C Chain C, Biochemical And Structural Analysis Of The Clavulanic Acid
Dehydeogenase (Cad) From Streptomyces Clavuligerus
pdb|2JAH|D Chain D, Biochemical And Structural Analysis Of The Clavulanic Acid
Dehydeogenase (Cad) From Streptomyces Clavuligerus
Length = 247
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 52/120 (43%), Gaps = 3/120 (2%)
Query: 139 IQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYL 198
+ +AV + V+ GG+DILVNNA L + + N G ++ LP+L
Sbjct: 71 VDAAVASTVEALGGLDILVNNAGIXLLGPVEDADTTDWTRXIDTNLLGLXYXTRAALPHL 130
Query: 199 KKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPRT 258
+S + S +N +N Y +K+G++ + + +E + V + P T
Sbjct: 131 LRSKGTVVQXSSIAGRVN---VRNAAVYQATKFGVNAFSETLRQEVTERGVRVVVIEPGT 187
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 25/43 (58%)
Query: 59 EVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
E+ AG +D+ D V +AV + V+ GG+DILVNNA
Sbjct: 50 ELTAAGAKVHVLELDVADRQGVDAAVASTVEALGGLDILVNNA 92
>pdb|3UVE|A Chain A, Crystal Structure Of Carveol Dehydrogenase
((+)-Trans-Carveol Dehydrogenase) From Mycobacterium
Avium
pdb|3UVE|B Chain B, Crystal Structure Of Carveol Dehydrogenase
((+)-Trans-Carveol Dehydrogenase) From Mycobacterium
Avium
pdb|3UVE|C Chain C, Crystal Structure Of Carveol Dehydrogenase
((+)-Trans-Carveol Dehydrogenase) From Mycobacterium
Avium
pdb|3UVE|D Chain D, Crystal Structure Of Carveol Dehydrogenase
((+)-Trans-Carveol Dehydrogenase) From Mycobacterium
Avium
Length = 286
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 94/231 (40%), Gaps = 26/231 (11%)
Query: 4 TGKLSGLTIFITGASRXXXXXXXXXXXXXXXNIVIA----------AKTAEPHPKLPGTI 53
TG++ G F+TGA+R +I+ TA P P +
Sbjct: 6 TGRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIP-ASTPEDL 64
Query: 54 YSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTAN-T 112
A V+ + VD+RD A+++AV++ V++ G +DI+V NA + DT + T
Sbjct: 65 AETADLVKGHNRRIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKT 124
Query: 113 PLKKYDLMNQINARGTY-LVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI-SLTDTAN 170
+ + M IN G + VKA I GG IL ++ + + T +
Sbjct: 125 SEEDWTEMIDINLAGVWKTVKAGVPHMIAGG-------RGGSIILTSSVGGLKAYPHTGH 177
Query: 171 TPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFK 221
K+ ++ + A G L ++ + N H ++ P+ N FK
Sbjct: 178 YVAAKHGVVGLMRAFGVELGQ-----HMIRVNSVHPTHVKTPMLHNEGTFK 223
>pdb|3IMF|A Chain A, 1.99 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor'
pdb|3IMF|B Chain B, 1.99 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor'
pdb|3IMF|C Chain C, 1.99 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor'
pdb|3IMF|D Chain D, 1.99 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor'
Length = 257
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 80/196 (40%), Gaps = 17/196 (8%)
Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
+IQ + +KFG IDIL+NNA+ + + + ++ + I GT+ SQ Y
Sbjct: 69 DIQKXIEQIDEKFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKY 128
Query: 198 -LKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEF-KGDNIAVNALW 255
++K +I+N + H A +K G+ +A E+ + I VNA+
Sbjct: 129 WIEKGIKGNIINXVATYAWDAGPGVIHSA--AAKAGVLAXTKTLAVEWGRKYGIRVNAIA 186
Query: 256 PRTAIYTAAIEMLTGGSADAKATSRK--------PEIMADAAYYILSSNPPSLTGQFLID 307
P T + L AK T + PE +A AYY+ S + G
Sbjct: 187 PGPIERTGGADKLWISEEXAKRTIQSVPLGRLGTPEEIAGLAYYLCSDEAAYINGTCXTX 246
Query: 308 DEVLKAQHIDLEQYSY 323
D QH L QY +
Sbjct: 247 D---GGQH--LHQYPF 257
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 7/102 (6%)
Query: 35 NIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGI 94
+VI +T E + A E+E G L D+R+ +Q + +KFG I
Sbjct: 32 RVVITGRTKE-------KLEEAKLEIEQFPGQILTVQXDVRNTDDIQKXIEQIDEKFGRI 84
Query: 95 DILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQG 136
DIL+NNA+ + + + ++ + I GT+ + G
Sbjct: 85 DILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIG 126
>pdb|3FTP|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase From Burkholderia Pseudomallei At 2.05 A
Resolution
pdb|3FTP|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase From Burkholderia Pseudomallei At 2.05 A
Resolution
pdb|3FTP|C Chain C, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase From Burkholderia Pseudomallei At 2.05 A
Resolution
pdb|3FTP|D Chain D, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase From Burkholderia Pseudomallei At 2.05 A
Resolution
Length = 270
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 53/120 (44%), Gaps = 6/120 (5%)
Query: 139 IQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYL 198
+ + V + + +FG +++LVNNA ++D + N + + +S+ L +
Sbjct: 92 VDALVESTLKEFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPM 151
Query: 199 KKSNHAHILNISPPLNL--NPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
K+ I+NI+ + NP V Y +K G++ +A E I VN + P
Sbjct: 152 MKARGGRIVNITSVVGSAGNP----GQVNYAAAKAGVAGMTRALAREIGSRGITVNCVAP 207
Score = 29.6 bits (65), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 39/90 (43%), Gaps = 7/90 (7%)
Query: 13 FITGASRXXXXXXXXXXXXXXXNIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIV 72
+TGASR +VI T E + G + + AG ++
Sbjct: 32 IVTGASRGIGRAIALELARRGA-MVIGTATTEAGAEGIGAAF------KQAGLEGRGAVL 84
Query: 73 DIRDEHAVQSAVNAAVDKFGGIDILVNNAS 102
++ D AV + V + + +FG +++LVNNA
Sbjct: 85 NVNDATAVDALVESTLKEFGALNVLVNNAG 114
>pdb|4DBZ|A Chain A, Crystal Structure Of V151l Actinorhodin Polyketide
Ketoreductase With Nadph
pdb|4DBZ|B Chain B, Crystal Structure Of V151l Actinorhodin Polyketide
Ketoreductase With Nadph
Length = 281
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 57/122 (46%), Gaps = 6/122 (4%)
Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
EI++ V A V+++G +D+LVNNA TA + + + + N G + V+++ L
Sbjct: 89 EIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKA 148
Query: 198 --LKKSNHAHILNISPPLNLNPFWFKNHVA-YTISKYGMSMCALGMAEEFKGDNIAVNAL 254
+ + I+NI+ H A Y+ SK+G+ + E I VNA+
Sbjct: 149 GGMLERGTGRIVNIASTGGKQGLV---HAAPYSASKHGVVGFTKALGLELARTGITVNAV 205
Query: 255 WP 256
P
Sbjct: 206 CP 207
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 58 KEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNAS 102
KE+ +AG D+R +++ V A V+++G +D+LVNNA
Sbjct: 68 KELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAG 112
>pdb|3OP4|A Chain A, Crystal Structure Of Putative
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Vibrio
Cholerae O1 Biovar Eltor Str. N16961 In Complex With
Nadp+
pdb|3OP4|B Chain B, Crystal Structure Of Putative
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Vibrio
Cholerae O1 Biovar Eltor Str. N16961 In Complex With
Nadp+
Length = 248
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 47/118 (39%), Gaps = 2/118 (1%)
Query: 139 IQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYL 198
I++ + A D+FGG+DILVNNA +++ + + N + +S+ L
Sbjct: 70 IEAVLKAITDEFGGVDILVNNAGITRDNLLXRXKEEEWSDIXETNLTSIFRLSKAVLRGX 129
Query: 199 KKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
K I+N+ + Y +K G+ A E + VN + P
Sbjct: 130 XKKRQGRIINVGSV--VGTXGNAGQANYAAAKAGVIGFTKSXAREVASRGVTVNTVAP 185
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 16/98 (16%)
Query: 7 LSGLTIFITGASRXXXXXXXXXXXXXXXNIVIAAKTAEPHPKLPGTIYS--AAKEVED-A 63
L G +TGASR IA AE K+ GT S A+ + D
Sbjct: 7 LEGKVALVTGASRGIGK-------------AIAELLAERGAKVIGTATSESGAQAISDYL 53
Query: 64 GGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
G N +++ + ++++ + A D+FGG+DILVNNA
Sbjct: 54 GDNGKGXALNVTNPESIEAVLKAITDEFGGVDILVNNA 91
>pdb|2UVD|A Chain A, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
pdb|2UVD|B Chain B, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
pdb|2UVD|C Chain C, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
pdb|2UVD|D Chain D, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
pdb|2UVD|E Chain E, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
pdb|2UVD|F Chain F, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
pdb|2UVD|G Chain G, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
pdb|2UVD|H Chain H, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
Length = 246
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 47/124 (37%), Gaps = 6/124 (4%)
Query: 7 LSGLTIFITGASRXXXXXXXXXXXXXXXNIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
L G +TGASR N+V+ E E++ G +
Sbjct: 2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKAN------EVVDEIKKLGSD 55
Query: 67 CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINAR 126
+ D+ + V + V VD FG +DILVNNA +++D + N +
Sbjct: 56 AIAVRADVANAEDVTNMVKQTVDVFGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLK 115
Query: 127 GTYL 130
G +L
Sbjct: 116 GVFL 119
>pdb|1W4Z|A Chain A, Structure Of Actinorhodin Polyketide (Actiii) Reductase
pdb|1W4Z|B Chain B, Structure Of Actinorhodin Polyketide (Actiii) Reductase
Length = 281
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 57/122 (46%), Gaps = 6/122 (4%)
Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
EI++ V A V+++G +D+LVNNA TA + + + + N G + V+++ L
Sbjct: 89 EIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKA 148
Query: 198 --LKKSNHAHILNISPPLNLNPFWFKNHVA-YTISKYGMSMCALGMAEEFKGDNIAVNAL 254
+ + I+NI+ H A Y+ SK+G+ + E I VNA+
Sbjct: 149 GGMLERGTGRIVNIASTGGKQGVV---HAAPYSASKHGVVGFTKALGLELARTGITVNAV 205
Query: 255 WP 256
P
Sbjct: 206 CP 207
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 58 KEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNAS 102
KE+ +AG D+R +++ V A V+++G +D+LVNNA
Sbjct: 68 KELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAG 112
>pdb|3F9I|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase Rickettsia Prowazekii
pdb|3F9I|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase Rickettsia Prowazekii
Length = 249
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 73/167 (43%), Gaps = 13/167 (7%)
Query: 147 VDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHI 206
+ K +DILV NA S T + +D + IN + ++++++ + + + + I
Sbjct: 79 ISKTSNLDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRI 138
Query: 207 LNISPPLNL--NPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPRTAIYTAA 264
+NIS + + NP Y SK G+ ++ E I VNA+ P I +
Sbjct: 139 INISSIVGIAGNP----GQANYCASKAGLIGMTKSLSYEVATRGITVNAVAP-GFIKSDM 193
Query: 265 IEMLTGGSADA------KATSRKPEIMADAAYYILSSNPPSLTGQFL 305
+ L +A T PE +A A ++ S+N +TGQ L
Sbjct: 194 TDKLNEKQREAIVQKIPLGTYGIPEDVAYAVAFLASNNASYITGQTL 240
>pdb|3AI1|A Chain A, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph And
L-Sorbose Reveals The Structure Bases Of Its Catalytic
Mechanism And High Substrate Selectivity
pdb|3AI1|B Chain B, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph And
L-Sorbose Reveals The Structure Bases Of Its Catalytic
Mechanism And High Substrate Selectivity
pdb|3AI2|A Chain A, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph
pdb|3AI2|B Chain B, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph
pdb|3AI2|H Chain H, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph
pdb|3AI2|D Chain D, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph
pdb|3AI2|E Chain E, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph
pdb|3AI2|C Chain C, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph
pdb|3AI2|F Chain F, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph
pdb|3AI2|G Chain G, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph
Length = 263
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 87/216 (40%), Gaps = 24/216 (11%)
Query: 7 LSGLTIFITGASRXXXXXXXXXXXXXXXNIVIAAKTAEPHPKLPGTIYSAAKEV-EDAGG 65
+SG ITG+S +IV+ A+ + ++ AA+ + E G
Sbjct: 5 ISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVD-------RLHEAARSLKEKFGV 57
Query: 66 NCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINA 125
L VD+ V + V + FGG DILVNNA S +K+ +++
Sbjct: 58 RVLEVAVDVATPEGVDAVVESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELHV 117
Query: 126 RGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINAR 185
V+ ++GL V + GG +++NAS ++ P+ Y++ +
Sbjct: 118 MAA--VRLARGL-----VPGMRARGGG--AIIHNASICAVQPLWYEPI--YNV-----TK 161
Query: 186 GTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFK 221
++ K L ++ + I+P L L P W K
Sbjct: 162 AALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIK 197
>pdb|4DC1|A Chain A, Crystal Structure Of Y202f Actinorhodin Polyketide
Ketoreductase With Nadph
pdb|4DC1|B Chain B, Crystal Structure Of Y202f Actinorhodin Polyketide
Ketoreductase With Nadph
Length = 281
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 57/122 (46%), Gaps = 6/122 (4%)
Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
EI++ V A V+++G +D+LVNNA TA + + + + N G + V+++ L
Sbjct: 89 EIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKA 148
Query: 198 --LKKSNHAHILNISPPLNLNPFWFKNHVA-YTISKYGMSMCALGMAEEFKGDNIAVNAL 254
+ + I+NI+ H A Y+ SK+G+ + E I VNA+
Sbjct: 149 GGMLERGTGRIVNIASTGGKQGVV---HAAPYSASKHGVVGFTKALGLELARTGITVNAV 205
Query: 255 WP 256
P
Sbjct: 206 CP 207
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 58 KEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNAS 102
KE+ +AG D+R +++ V A V+++G +D+LVNNA
Sbjct: 68 KELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAG 112
>pdb|2RH4|A Chain A, Actinorhodin Ketoreductase, Actkr, With Nadph And
Inhibitor Emodin
pdb|2RH4|B Chain B, Actinorhodin Ketoreductase, Actkr, With Nadph And
Inhibitor Emodin
pdb|2RHC|B Chain B, Actinorhodin Ketordeuctase, Actkr, With Nadp+ And
Inhibitor Emodin
pdb|2RHC|A Chain A, Actinorhodin Ketordeuctase, Actkr, With Nadp+ And
Inhibitor Emodin
Length = 277
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 57/122 (46%), Gaps = 6/122 (4%)
Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
EI++ V A V+++G +D+LVNNA TA + + + + N G + V+++ L
Sbjct: 85 EIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKA 144
Query: 198 --LKKSNHAHILNISPPLNLNPFWFKNHVA-YTISKYGMSMCALGMAEEFKGDNIAVNAL 254
+ + I+NI+ H A Y+ SK+G+ + E I VNA+
Sbjct: 145 GGMLERGTGRIVNIASTGGKQGVV---HAAPYSASKHGVVGFTKALGLELARTGITVNAV 201
Query: 255 WP 256
P
Sbjct: 202 CP 203
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 58 KEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNAS 102
KE+ +AG D+R +++ V A V+++G +D+LVNNA
Sbjct: 64 KELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAG 108
>pdb|1X7G|A Chain A, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp
Bound
pdb|1X7G|B Chain B, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp
Bound
pdb|1X7H|A Chain A, Actinorhodin Polyketide Ketoreductase, With Nadph Bound
pdb|1X7H|B Chain B, Actinorhodin Polyketide Ketoreductase, With Nadph Bound
pdb|1XR3|A Chain A, Actinorhodin Polyketide Ketoreductase With Nadp And The
Inhibitor Isoniazid Bound
pdb|1XR3|B Chain B, Actinorhodin Polyketide Ketoreductase With Nadp And The
Inhibitor Isoniazid Bound
Length = 261
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 57/122 (46%), Gaps = 6/122 (4%)
Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
EI++ V A V+++G +D+LVNNA TA + + + + N G + V+++ L
Sbjct: 69 EIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKA 128
Query: 198 --LKKSNHAHILNISPPLNLNPFWFKNHVA-YTISKYGMSMCALGMAEEFKGDNIAVNAL 254
+ + I+NI+ H A Y+ SK+G+ + E I VNA+
Sbjct: 129 GGMLERGTGRIVNIASTGGKQGVV---HAAPYSASKHGVVGFTKALGLELARTGITVNAV 185
Query: 255 WP 256
P
Sbjct: 186 CP 187
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 58 KEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNAS 102
KE+ +AG D+R +++ V A V+++G +D+LVNNA
Sbjct: 48 KELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAG 92
>pdb|3UCX|A Chain A, The Structure Of A Short Chain Dehydrogenase From
Mycobacterium Smegmatis
Length = 264
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 49/112 (43%), Gaps = 8/112 (7%)
Query: 5 GKLSGLTIFITGASRXXXXXXXXXXXXXXXNIVIAAKTAEPHPKLPGTIYSAAKEVEDAG 64
G L+ + I+G ++V+AA+T E + AK+V D G
Sbjct: 7 GLLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVE-------RLEDVAKQVTDTG 59
Query: 65 GNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAI-SLTDTANTPLK 115
L DI D+ V V+ + +G +D+++NNA + S+ ANT +
Sbjct: 60 RRALSVGTDITDDAQVAHLVDETMKAYGRVDVVINNAFRVPSMKPFANTTFE 111
Score = 32.3 bits (72), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 39/189 (20%), Positives = 78/189 (41%), Gaps = 28/189 (14%)
Query: 138 EIQSAVNAAVDKFGGIDILVNNASAI-SLTDTANTPLKKYDLMNQINARGTYLVSQKCLP 196
++ V+ + +G +D+++NNA + S+ ANT + ++ G + Q P
Sbjct: 74 QVAHLVDETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTP 133
Query: 197 YLKKSNHAHILNISPPLNLNPFWFKN----HVAYTISKYGMSMCALGMAEEFKGDNIAVN 252
L++S A + N+N ++ + AY ++K + + +A E I VN
Sbjct: 134 ALEESKGAVV-------NVNSMVVRHSQAKYGAYKMAKSALLAMSQTLATELGEKGIRVN 186
Query: 253 ALWP--------------RTAIYTAAIEMLTGGSADAKATSRKP--EIMADAAYYILSSN 296
++ P + Y ++E + +A R P + +A A ++ S
Sbjct: 187 SVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDLKRLPTEDEVASAILFMASDL 246
Query: 297 PPSLTGQFL 305
+TGQ L
Sbjct: 247 ASGITGQAL 255
>pdb|2NWQ|A Chain A, Short Chain Dehydrogenase From Pseudomonas Aeruginosa
pdb|2NWQ|B Chain B, Short Chain Dehydrogenase From Pseudomonas Aeruginosa
pdb|2NWQ|C Chain C, Short Chain Dehydrogenase From Pseudomonas Aeruginosa
pdb|2NWQ|D Chain D, Short Chain Dehydrogenase From Pseudomonas Aeruginosa
Length = 272
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 53/128 (41%), Gaps = 9/128 (7%)
Query: 1 MINTGKLSGLTIFITGASRXXXXXXXXXXXXXXXNIVIAAKTAEPHPKLPGTIYSAAKEV 60
++ G T+FITGA+ ++V+ + E L G + + +
Sbjct: 13 LVPRGSHXSSTLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTR-- 70
Query: 61 EDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANT-PLKKYDL 119
LP +D+RD A +AV+ ++F + L+NNA TD A + L +D
Sbjct: 71 ------VLPLTLDVRDRAAXSAAVDNLPEEFATLRGLINNAGLALGTDPAQSCDLDDWDT 124
Query: 120 MNQINARG 127
N +G
Sbjct: 125 XVDTNIKG 132
>pdb|4DC0|A Chain A, Crystal Structure Of F189w Actinorhodin Polyketide
Ketoreductase With Nadph
pdb|4DC0|B Chain B, Crystal Structure Of F189w Actinorhodin Polyketide
Ketoreductase With Nadph
Length = 281
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 57/122 (46%), Gaps = 6/122 (4%)
Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
EI++ V A V+++G +D+LVNNA TA + + + + N G + V+++ L
Sbjct: 89 EIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKA 148
Query: 198 --LKKSNHAHILNISPPLNLNPFWFKNHVA-YTISKYGMSMCALGMAEEFKGDNIAVNAL 254
+ + I+NI+ H A Y+ SK+G+ + E I VNA+
Sbjct: 149 GGMLERGTGRIVNIASTGGKQGV---VHAAPYSASKHGVVGFTKALGLELARTGITVNAV 205
Query: 255 WP 256
P
Sbjct: 206 CP 207
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 58 KEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNAS 102
KE+ +AG D+R +++ V A V+++G +D+LVNNA
Sbjct: 68 KELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAG 112
>pdb|4B79|A Chain A, The Aeropath Project And Pseudomonas Aeruginosa
High-throughput Crystallographic Studies For Assessment
Of Potential Targets In Early Stage Drug Discovery.
pdb|4B79|B Chain B, The Aeropath Project And Pseudomonas Aeruginosa
High-throughput Crystallographic Studies For Assessment
Of Potential Targets In Early Stage Drug Discovery.
pdb|4AVY|A Chain A, The Aeropath Project And Pseudomonas Aeruginosa
High-throughput Crystallographic Studies For Assessment
Of Potential Targets In Early Stage Drug Discovery.
pdb|4AVY|B Chain B, The Aeropath Project And Pseudomonas Aeruginosa
High-throughput Crystallographic Studies For Assessment
Of Potential Targets In Early Stage Drug Discovery
Length = 242
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 72/168 (42%), Gaps = 22/168 (13%)
Query: 153 IDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPP 212
+D+LVNNA IS D L ++ + ++N L SQ P L + ILNI+
Sbjct: 79 LDVLVNNAG-IS-RDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRG-GSILNIAS- 134
Query: 213 LNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPRTAIYTAAIEMLTGGS 272
+ F + AY+ SK + +A E+ + I VNA+ P I T + G
Sbjct: 135 -MYSTFGSADRPAYSASKGAIVQLTRSLACEYAAERIRVNAIAP-GWIDT---PLGAGLK 189
Query: 273 ADAKATSR------------KPEIMADAAYYILSSNPPSLTGQFLIDD 308
AD +AT R PE+ A AA ++ +TG L D
Sbjct: 190 ADVEATRRIMQRTPLARWGEAPEV-ASAAAFLCGPGASFVTGAVLAVD 236
>pdb|1AHI|A Chain A, 7 Alpha-Hydroxysteroid Dehydrogenase Complexed With Nadh
And 7-Oxo Glycochenodeoxycholic Acid
pdb|1AHI|B Chain B, 7 Alpha-Hydroxysteroid Dehydrogenase Complexed With Nadh
And 7-Oxo Glycochenodeoxycholic Acid
pdb|1AHH|A Chain A, 7 Alpha-hydroxysteroid Dehydrogenase Complexed With Nad+
pdb|1AHH|B Chain B, 7 Alpha-hydroxysteroid Dehydrogenase Complexed With Nad+
pdb|1FMC|A Chain A, 7-Alpha-Hydroxysteroid Dehydrogenase Complex With Nadh And
7-Oxo Glycochenodeoxycholic Acid
pdb|1FMC|B Chain B, 7-Alpha-Hydroxysteroid Dehydrogenase Complex With Nadh And
7-Oxo Glycochenodeoxycholic Acid
Length = 255
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 24/45 (53%)
Query: 59 EVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASA 103
E++ GG C DI E + + + A+ K G +DILVNNA
Sbjct: 54 EIQQLGGQAFACRCDITSEQELSALADFAISKLGKVDILVNNAGG 98
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 77/175 (44%), Gaps = 11/175 (6%)
Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
E+ + + A+ K G +DILVNNA + P+ + ++N + +SQ P
Sbjct: 74 ELSALADFAISKLGKVDILVNNAGG-GGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPE 132
Query: 198 LKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPR 257
++K+ IL I+ N N +Y SK S MA + NI VN + P
Sbjct: 133 MEKNGGGVILTITSMAAENKNI--NMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAP- 189
Query: 258 TAIYTAAIEMLTGGSADAKATSR-------KPEIMADAAYYILSSNPPSLTGQFL 305
AI T A++ + + K +P+ +A+AA ++ S ++GQ L
Sbjct: 190 GAILTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAALFLCSPAASWVSGQIL 244
>pdb|3V8B|A Chain A, Crystal Structure Of A 3-Ketoacyl-Acp Reductase From
Sinorhizobium Meliloti 1021
pdb|3V8B|B Chain B, Crystal Structure Of A 3-Ketoacyl-Acp Reductase From
Sinorhizobium Meliloti 1021
pdb|3V8B|C Chain C, Crystal Structure Of A 3-Ketoacyl-Acp Reductase From
Sinorhizobium Meliloti 1021
pdb|3V8B|D Chain D, Crystal Structure Of A 3-Ketoacyl-Acp Reductase From
Sinorhizobium Meliloti 1021
Length = 283
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Query: 53 IYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANT 112
+ A E+ AGG + D+ DE ++AV V KFG +DI+V NA I+
Sbjct: 65 VEEVADEIVGAGGQAIALEADVSDELQXRNAVRDLVLKFGHLDIVVANA-GINGVWAPID 123
Query: 113 PLK--KYDLMNQINARGTYL 130
LK ++D +N RGT+L
Sbjct: 124 DLKPFEWDETIAVNLRGTFL 143
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 134 SQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLK--KYDLMNQINARGTYLVS 191
S L+ ++AV V KFG +DI+V NA I+ LK ++D +N RGT+L
Sbjct: 87 SDELQXRNAVRDLVLKFGHLDIVVANA-GINGVWAPIDDLKPFEWDETIAVNLRGTFLTL 145
Query: 192 QKCLPYLKKSNHAHILNIS 210
+PYLK+ I+ +S
Sbjct: 146 HLTVPYLKQRGGGAIVVVS 164
>pdb|3ENN|A Chain A, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
FROM BRUCELLA Melitensis (P43212)
pdb|3ENN|B Chain B, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
FROM BRUCELLA Melitensis (P43212)
pdb|3ENN|C Chain C, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
FROM BRUCELLA Melitensis (P43212)
pdb|3ENN|D Chain D, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
FROM BRUCELLA Melitensis (P43212)
Length = 249
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 52/113 (46%), Gaps = 6/113 (5%)
Query: 146 AVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAH 205
A ++ GG+DILVNNA + +D + +N + ++++ + + +
Sbjct: 78 AEEEMGGVDILVNNAGITRDGLFVRMSDEDWDAVLTVNLTSVFNLTRELTHPMMRRRNGR 137
Query: 206 ILNISPPLNL--NPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
I+NI+ + + NP Y SK G+ + +A+E N+ VN + P
Sbjct: 138 IINITSIVGVTGNP----GQANYCASKAGLIGFSKSLAQEIASRNVTVNCIAP 186
Score = 30.0 bits (66), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 73 DIRDEHAVQSAVNAAVDKFGGIDILVNNAS 102
++ D AV++ A ++ GG+DILVNNA
Sbjct: 64 NLSDREAVKALGQKAEEEMGGVDILVNNAG 93
>pdb|3EMK|A Chain A, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
From Brucella Melitensis
pdb|3EMK|B Chain B, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
From Brucella Melitensis
pdb|3EMK|C Chain C, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
From Brucella Melitensis
pdb|3EMK|D Chain D, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
From Brucella Melitensis
Length = 246
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 52/113 (46%), Gaps = 6/113 (5%)
Query: 146 AVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAH 205
A ++ GG+DILVNNA + +D + +N + ++++ + + +
Sbjct: 75 AEEEMGGVDILVNNAGITRDGLFVRMSDEDWDAVLTVNLTSVFNLTRELTHPMMRRRNGR 134
Query: 206 ILNISPPLNL--NPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
I+NI+ + + NP Y SK G+ + +A+E N+ VN + P
Sbjct: 135 IINITSIVGVTGNP----GQANYCASKAGLIGFSKSLAQEIASRNVTVNCIAP 183
Score = 30.0 bits (66), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 73 DIRDEHAVQSAVNAAVDKFGGIDILVNNAS 102
++ D AV++ A ++ GG+DILVNNA
Sbjct: 61 NLSDREAVKALGQKAEEEMGGVDILVNNAG 90
>pdb|3M1A|A Chain A, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
pdb|3M1A|B Chain B, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
pdb|3M1A|C Chain C, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
pdb|3M1A|D Chain D, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
pdb|3M1A|E Chain E, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
pdb|3M1A|F Chain F, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
pdb|3M1A|G Chain G, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
pdb|3M1A|H Chain H, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
pdb|3M1A|I Chain I, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
pdb|3M1A|J Chain J, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
Length = 281
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/95 (22%), Positives = 45/95 (47%), Gaps = 2/95 (2%)
Query: 149 KFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILN 208
++G +D+LVNNA + T ++ + +++ G +++ LP ++ ++N
Sbjct: 76 RYGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQXRERGSGSVVN 135
Query: 209 ISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEE 243
IS F AY+ +K + + G+A+E
Sbjct: 136 ISS--FGGQLSFAGFSAYSATKAALEQLSEGLADE 168
>pdb|3AFM|A Chain A, Crystal Structure Of Aldose Reductase A1-R Responsible For
Alginate Metabolism
pdb|3AFM|B Chain B, Crystal Structure Of Aldose Reductase A1-R Responsible For
Alginate Metabolism
pdb|3AFN|B Chain B, Crystal Structure Of Aldose Reductase A1-R Complexed With
Nadp
pdb|3AFN|A Chain A, Crystal Structure Of Aldose Reductase A1-R Complexed With
Nadp
pdb|3AFN|C Chain C, Crystal Structure Of Aldose Reductase A1-R Complexed With
Nadp
pdb|3AFN|D Chain D, Crystal Structure Of Aldose Reductase A1-R Complexed With
Nadp
Length = 258
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 9/64 (14%)
Query: 140 QSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKK-----YDLMNQINARGTYLVSQKC 194
Q V+ V KFGGID+L+NNA + PL + YD + N R + ++
Sbjct: 73 QQLVDEFVAKFGGIDVLINNAGGL----VGRKPLPEIDDTFYDAVMDANIRSVVMTTKFA 128
Query: 195 LPYL 198
LP+L
Sbjct: 129 LPHL 132
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 43/112 (38%), Gaps = 10/112 (8%)
Query: 7 LSGLTIFITGASRXXXXXXXXXXXXXXXNIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGN 66
L G + ITG+S+ + + + K P I + GG+
Sbjct: 5 LKGKRVLITGSSQGIGLATARLFARAGAKVGLHGR------KAPANIDETIASMRADGGD 58
Query: 67 CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYD 118
D+ A Q V+ V KFGGID+L+NNA + PL + D
Sbjct: 59 AAFFAADLATSEACQQLVDEFVAKFGGIDVLINNAGGL----VGRKPLPEID 106
>pdb|3O4R|A Chain A, Crystal Structure Of Human DehydrogenaseREDUCTASE (SDR
FAMILY) MEMBER 4 (Dhrs4)
pdb|3O4R|B Chain B, Crystal Structure Of Human DehydrogenaseREDUCTASE (SDR
FAMILY) MEMBER 4 (Dhrs4)
pdb|3O4R|C Chain C, Crystal Structure Of Human DehydrogenaseREDUCTASE (SDR
FAMILY) MEMBER 4 (Dhrs4)
pdb|3O4R|D Chain D, Crystal Structure Of Human DehydrogenaseREDUCTASE (SDR
FAMILY) MEMBER 4 (Dhrs4)
Length = 261
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 76/176 (43%), Gaps = 18/176 (10%)
Query: 143 VNAAVDKFGGIDILVNNASA----ISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYL 198
V AV GGIDILV+NA+ S+ D + +D IN + L+++ +P +
Sbjct: 83 VATAVKLHGGIDILVSNAAVNPFFGSIMDVTE---EVWDKTLDINVKAPALMTKAVVPEM 139
Query: 199 KKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP-- 256
+K ++ +S +P Y +SK + +A E NI VN L P
Sbjct: 140 EKRGGGSVVIVSSIAAFSP--SPGFSPYNVSKTALLGLTKTLAIELAPRNIRVNCLAPGL 197
Query: 257 -RTAIYTAAIEMLTGGSADAKATSR-----KPEIMADAAYYILSSNPPSLTGQFLI 306
+T+ ++ + M K T R +PE A ++ S + +TG+ ++
Sbjct: 198 IKTS-FSRMLWMDKEKEESMKETLRIRRLGEPEDCAGIVSFLCSEDASYITGETVV 252
>pdb|3QIV|A Chain A, Crystal Structure Of A Putative Short-Chain Dehydrogenase
Or 3- Oxoacyl-[acyl-Carrier-Protein] Reductase From
Mycobacterium Paratuberculosis Atcc Baa-968 K-10
pdb|3QIV|B Chain B, Crystal Structure Of A Putative Short-Chain Dehydrogenase
Or 3- Oxoacyl-[acyl-Carrier-Protein] Reductase From
Mycobacterium Paratuberculosis Atcc Baa-968 K-10
Length = 253
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 70/168 (41%), Gaps = 18/168 (10%)
Query: 149 KFGGIDILVNNAS---AISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAH 205
+FGGID LVNNA+ + L + Y +N G ++ + K
Sbjct: 83 EFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGA 142
Query: 206 ILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP--------R 257
I+N S + + + N+ Y ++K G++ ++ E G NI +NA+ P R
Sbjct: 143 IVNQS---STAAWLYSNY--YGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANR 197
Query: 258 TAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFL 305
T ++ + G ++ + P+ + ++LS +TGQ
Sbjct: 198 TTTPKEMVDDIVKGLPLSRMGT--PDDLVGMCLFLLSDEASWITGQIF 243
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 29/48 (60%)
Query: 55 SAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNAS 102
+ AK++ GG + VD+ D + ++ + + +FGGID LVNNA+
Sbjct: 48 AVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEFGGIDYLVNNAA 95
>pdb|3O38|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From
Mycobacterium Smegmatis
pdb|3O38|B Chain B, Crystal Structure Of A Short Chain Dehydrogenase From
Mycobacterium Smegmatis
pdb|3O38|C Chain C, Crystal Structure Of A Short Chain Dehydrogenase From
Mycobacterium Smegmatis
pdb|3O38|D Chain D, Crystal Structure Of A Short Chain Dehydrogenase From
Mycobacterium Smegmatis
Length = 266
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 51/102 (50%), Gaps = 14/102 (13%)
Query: 65 GNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQIN 124
G + D+ AV + + V+K G +D+LVNNA T + +++D + +N
Sbjct: 73 GRVEAVVCDVTSTEAVDALITQTVEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRV--LN 130
Query: 125 ARGTYLVKASQGLEIQSAVNAAVDKFGGID---ILVNNASAI 163
T +++A++ AA+ F G+D ++VNNAS +
Sbjct: 131 VTLTSVMRATR---------AALRYFRGVDHGGVIVNNASVL 163
Score = 36.2 bits (82), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 80/177 (45%), Gaps = 15/177 (8%)
Query: 139 IQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYL 198
+ + + V+K G +D+LVNNA T + +++D + + ++ L Y
Sbjct: 88 VDALITQTVEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYF 147
Query: 199 KKSNHAH-ILNISPPLNLNPFWFKNHVAYTISKYG---MSMCALGMAEEFKGDNIAVNAL 254
+ +H I+N + L ++H Y +K G ++ C+ A EF + +NA+
Sbjct: 148 RGVDHGGVIVNNASVLGWRAQHSQSH--YAAAKAGVMALTRCSAIEAVEF---GVRINAV 202
Query: 255 WPRTAIY-----TAAIEMLTGGSAD-AKATSRKPEIMADAAYYILSSNPPSLTGQFL 305
P A + T++ E+L ++D A + +P +A ++ S +TG+ +
Sbjct: 203 SPSIARHKFLEKTSSSELLDRLASDEAFGRAAEPWEVAATIAFLASDYSSYMTGEVV 259
>pdb|3UXY|A Chain A, The Crystal Structure Of Short Chain Dehydrogenase From
Rhodobacter Sphaeroides
pdb|3UXY|B Chain B, The Crystal Structure Of Short Chain Dehydrogenase From
Rhodobacter Sphaeroides
pdb|3UXY|C Chain C, The Crystal Structure Of Short Chain Dehydrogenase From
Rhodobacter Sphaeroides
pdb|3UXY|D Chain D, The Crystal Structure Of Short Chain Dehydrogenase From
Rhodobacter Sphaeroides
Length = 266
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 43/107 (40%), Gaps = 2/107 (1%)
Query: 150 FGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNI 209
G +DI+VNNA IS T + L +N + + + +P + I+N+
Sbjct: 92 LGRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLXAAAGGGAIVNV 151
Query: 210 SPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
+ L P H Y ++K ++ + I +NA+ P
Sbjct: 152 ASCWGLRP--GPGHALYCLTKAALASLTQCXGXDHAPQGIRINAVCP 196
>pdb|3AI3|A Chain A, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph And
L-Sorbose
pdb|3AI3|C Chain C, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph And
L-Sorbose
pdb|3AI3|E Chain E, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph And
L-Sorbose
pdb|3AI3|G Chain G, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph And
L-Sorbose
Length = 263
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 86/216 (39%), Gaps = 24/216 (11%)
Query: 7 LSGLTIFITGASRXXXXXXXXXXXXXXXNIVIAAKTAEPHPKLPGTIYSAAKEV-EDAGG 65
+SG ITG+S +IV+ A+ + ++ AA+ + E G
Sbjct: 5 ISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVD-------RLHEAARSLKEKFGV 57
Query: 66 NCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINA 125
L VD+ V + V + FGG DILVNNA S +K+ ++
Sbjct: 58 RVLEVAVDVATPEGVDAVVESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLV 117
Query: 126 RGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINAR 185
V+ ++GL V + GG +++NAS ++ P+ Y++ +
Sbjct: 118 MAA--VRLARGL-----VPGMRARGGG--AIIHNASICAVQPLWYEPI--YNV-----TK 161
Query: 186 GTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFK 221
++ K L ++ + I+P L L P W K
Sbjct: 162 AALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIK 197
>pdb|1PR9|A Chain A, Human L-Xylulose Reductase Holoenzyme
pdb|1PR9|B Chain B, Human L-Xylulose Reductase Holoenzyme
pdb|1WNT|A Chain A, Strucutre Of The Tetrameric Form Of Human L-Xylulose
Reductase
pdb|1WNT|B Chain B, Strucutre Of The Tetrameric Form Of Human L-Xylulose
Reductase
pdb|1WNT|C Chain C, Strucutre Of The Tetrameric Form Of Human L-Xylulose
Reductase
pdb|1WNT|D Chain D, Strucutre Of The Tetrameric Form Of Human L-Xylulose
Reductase
Length = 244
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 52/123 (42%), Gaps = 4/123 (3%)
Query: 142 AVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYL-KK 200
A A+ G +D+LVNNA+ L + +D ++N R VSQ L +
Sbjct: 66 ATERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIAR 125
Query: 201 SNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPRTAI 260
I+N+S + NH Y +K + M MA E I VNA+ P T +
Sbjct: 126 GVPGAIVNVSSQCSQRA--VTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNP-TVV 182
Query: 261 YTA 263
T+
Sbjct: 183 MTS 185
Score = 28.9 bits (63), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 6/67 (8%)
Query: 69 PCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGT 128
P VD+ D A + A+ + G +D+LVNNA+ L + +D ++N R
Sbjct: 56 PVCVDLGDWEATERALGS----VGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRA- 110
Query: 129 YLVKASQ 135
+++ SQ
Sbjct: 111 -VIQVSQ 116
>pdb|1E3S|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex
With Nadh
pdb|1E3S|B Chain B, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex
With Nadh
pdb|1E3S|C Chain C, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex
With Nadh
pdb|1E3S|D Chain D, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex
With Nadh
pdb|1E3W|B Chain B, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex
With Nadh And 3-Keto Butyrate
pdb|1E3W|C Chain C, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex
With Nadh And 3-Keto Butyrate
pdb|1E3W|D Chain D, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex
With Nadh And 3-Keto Butyrate
Length = 261
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 26/44 (59%)
Query: 59 EVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNAS 102
E + GGNC+ ++ E VQ+A+ A +KFG ID+ VN A
Sbjct: 50 EAKKLGGNCIFAPANVTSEKEVQAALTLAKEKFGRIDVAVNCAG 93
>pdb|1E3W|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex
With Nadh And 3-Keto Butyrate
Length = 261
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 26/44 (59%)
Query: 59 EVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNAS 102
E + GGNC+ ++ E VQ+A+ A +KFG ID+ VN A
Sbjct: 50 EAKKLGGNCIFAPANVTSEKEVQAALTLAKEKFGRIDVAVNCAG 93
>pdb|4EGF|A Chain A, Crystal Structure Of A L-Xylulose Reductase From
Mycobacterium Smegmatis
pdb|4EGF|B Chain B, Crystal Structure Of A L-Xylulose Reductase From
Mycobacterium Smegmatis
pdb|4EGF|C Chain C, Crystal Structure Of A L-Xylulose Reductase From
Mycobacterium Smegmatis
pdb|4EGF|D Chain D, Crystal Structure Of A L-Xylulose Reductase From
Mycobacterium Smegmatis
pdb|4EGF|E Chain E, Crystal Structure Of A L-Xylulose Reductase From
Mycobacterium Smegmatis
pdb|4EGF|F Chain F, Crystal Structure Of A L-Xylulose Reductase From
Mycobacterium Smegmatis
pdb|4EGF|G Chain G, Crystal Structure Of A L-Xylulose Reductase From
Mycobacterium Smegmatis
pdb|4EGF|H Chain H, Crystal Structure Of A L-Xylulose Reductase From
Mycobacterium Smegmatis
Length = 266
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 44/107 (41%), Gaps = 1/107 (0%)
Query: 150 FGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNI 209
FGG+D+LVNNA +T + +D +N R L++ + + + I
Sbjct: 96 FGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAI-I 154
Query: 210 SPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
+ +H AY SK G+ M +A E I N++ P
Sbjct: 155 TVASAAALAPLPDHYAYCTSKAGLVMATKVLARELGPHGIRANSVCP 201
Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 31/65 (47%)
Query: 72 VDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLV 131
+D+ + A A + FGG+D+LVNNA +T + +D +N R L+
Sbjct: 77 IDLAEPDAPAELARRAAEAFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALL 136
Query: 132 KASQG 136
++ G
Sbjct: 137 ASAVG 141
>pdb|1E6W|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex
With Nadh And Estradiol
pdb|1E6W|B Chain B, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex
With Nadh And Estradiol
pdb|1E6W|C Chain C, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex
With Nadh And Estradiol
pdb|1E6W|D Chain D, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex
With Nadh And Estradiol
Length = 260
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 26/44 (59%)
Query: 59 EVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNAS 102
E + GGNC+ ++ E VQ+A+ A +KFG ID+ VN A
Sbjct: 49 EAKKLGGNCIFAPANVTSEKEVQAALTLAKEKFGRIDVAVNCAG 92
>pdb|3D3W|A Chain A, Structure Of L-Xylulose Reductase With Bound Coenzyme,
Phosphate And Hydroxide
Length = 244
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 52/123 (42%), Gaps = 4/123 (3%)
Query: 142 AVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYL-KK 200
A A+ G +D+LVNNA+ L + +D ++N R VSQ L +
Sbjct: 66 ATERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIAR 125
Query: 201 SNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPRTAI 260
I+N+S + NH Y +K + M MA E I VNA+ P T +
Sbjct: 126 GVPGAIVNVSSQXSQRA--VTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNP-TVV 182
Query: 261 YTA 263
T+
Sbjct: 183 MTS 185
Score = 28.9 bits (63), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 6/67 (8%)
Query: 69 PCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGT 128
P VD+ D A + A+ + G +D+LVNNA+ L + +D ++N R
Sbjct: 56 PVCVDLGDWEATERALGS----VGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRA- 110
Query: 129 YLVKASQ 135
+++ SQ
Sbjct: 111 -VIQVSQ 116
>pdb|3GRP|A Chain A, 2.1 Angstrom Crystal Structure Of
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Bartonella Henselae
pdb|3GRP|B Chain B, 2.1 Angstrom Crystal Structure Of
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Bartonella Henselae
pdb|3GRP|C Chain C, 2.1 Angstrom Crystal Structure Of
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Bartonella Henselae
pdb|3GRP|D Chain D, 2.1 Angstrom Crystal Structure Of
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Bartonella Henselae
Length = 266
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 72/176 (40%), Gaps = 15/176 (8%)
Query: 139 IQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYL 198
I+ A + GIDILVNNA + +D + +N ++++ + +
Sbjct: 88 IKQLAEVAEREMEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSM 147
Query: 199 KKSNHAHILNISPPLNL--NPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
+ + I+NI+ + + NP Y +K G+ + +A+E NI VN + P
Sbjct: 148 MRRRYGRIINITSIVGVVGNP----GQTNYCAAKAGLIGFSKALAQEIASRNITVNCIAP 203
Query: 257 RTAIYTAAIEMLTGGSADA-------KATSRKPEIMADAAYYILSSNPPSLTGQFL 305
I +A + L +A K EI A A Y+ S LTGQ L
Sbjct: 204 -GFIKSAMTDKLNEKQKEAIMAMIPMKRMGIGEEI-AFATVYLASDEAAYLTGQTL 257
>pdb|4IMR|A Chain A, Crystal Structure Of 3-oxoacyl (acyl-carrier-protein)
Reductase (target Efi-506442) From Agrobacterium
Tumefaciens C58 With Nadp Bound
pdb|4IMR|B Chain B, Crystal Structure Of 3-oxoacyl (acyl-carrier-protein)
Reductase (target Efi-506442) From Agrobacterium
Tumefaciens C58 With Nadp Bound
Length = 275
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 51/108 (47%), Gaps = 10/108 (9%)
Query: 153 IDILVNNASA-ISLTDTANTPLKKYDLMNQ--INARGTYLVSQKCLPYLKKSNHAHILNI 209
+DILV NASA I+ T +A TP DL Q +N T + Q LP + +++I
Sbjct: 110 VDILVINASAQINATLSALTP---NDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSI 166
Query: 210 SPPLNLNPFWFKNHV-AYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
L P K+ V AY +K A +F GDN+ +N L P
Sbjct: 167 GSINQLRP---KSVVTAYAATKAAQHNLIQSQARDFAGDNVLLNTLAP 211
>pdb|1XG5|A Chain A, Structure Of Human Putative Dehydrogenase Mgc4172 In
Complex With Nadp
pdb|1XG5|B Chain B, Structure Of Human Putative Dehydrogenase Mgc4172 In
Complex With Nadp
pdb|1XG5|C Chain C, Structure Of Human Putative Dehydrogenase Mgc4172 In
Complex With Nadp
pdb|1XG5|D Chain D, Structure Of Human Putative Dehydrogenase Mgc4172 In
Complex With Nadp
Length = 279
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 74/183 (40%), Gaps = 23/183 (12%)
Query: 129 YLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTY 188
Y S +I S +A + G+DI +NNA + + M +N
Sbjct: 88 YRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALS 147
Query: 189 LVSQKCLPYLKKSN--HAHILNISP-------PLNLNPFWFKNHVAYTISKYGMSMCALG 239
+ +++ +K+ N HI+NI+ PL++ F Y+ +KY ++ G
Sbjct: 148 ICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHF-------YSATKYAVTALTEG 200
Query: 240 MAEEFK--GDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSR-----KPEIMADAAYYI 292
+ +E + +I + P A ++ A AT KPE +A+A Y+
Sbjct: 201 LRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAATYEQMKCLKPEDVAEAVIYV 260
Query: 293 LSS 295
LS+
Sbjct: 261 LST 263
Score = 32.0 bits (71), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 37/91 (40%), Gaps = 9/91 (9%)
Query: 13 FITGASRXXXXXXXXXXXXXXXNIVIAAKTAEPHPKLPGTIYSAAKEVEDAG--GNCLPC 70
+TGAS +V A+T G I A E + AG G +P
Sbjct: 36 LVTGASGGIGAAVARALVQQGLKVVGCARTV-------GNIEELAAECKSAGYPGTLIPY 88
Query: 71 IVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
D+ +E + S +A + G+DI +NNA
Sbjct: 89 RCDLSNEEDILSMFSAIRSQHSGVDICINNA 119
>pdb|1ULS|A Chain A, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8
pdb|1ULS|B Chain B, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8
pdb|1ULS|C Chain C, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8
pdb|1ULS|D Chain D, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8
pdb|1ULS|E Chain E, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8
pdb|1ULS|F Chain F, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8
pdb|1ULS|G Chain G, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8
pdb|1ULS|H Chain H, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8
Length = 245
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 72/175 (41%), Gaps = 8/175 (4%)
Query: 139 IQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYL 198
++ A+ G +D +V+ A PL+ ++L+ ++N G++LV++
Sbjct: 64 VERGFAEALAHLGRLDGVVHYAGITRDNFHWKXPLEDWELVLRVNLTGSFLVAKAASEAX 123
Query: 199 KKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP-- 256
++ N I+ + + L N+ A G++ +A E I VN L P
Sbjct: 124 REKNPGSIVLTASRVYLGNLGQANYAASXAGVVGLTRT---LALELGRWGIRVNTLAPGF 180
Query: 257 -RTAIYTAAIEMLTGGSADAKATSR--KPEIMADAAYYILSSNPPSLTGQFLIDD 308
T E + + A R KP +A AA ++LS +TGQ L D
Sbjct: 181 IETRXTAKVPEKVREKAIAATPLGRAGKPLEVAYAALFLLSDESSFITGQVLFVD 235
Score = 32.3 bits (72), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 32/63 (50%)
Query: 69 PCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGT 128
P + D+ D +V+ A+ G +D +V+ A PL+ ++L+ ++N G+
Sbjct: 53 PVVXDVADPASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKXPLEDWELVLRVNLTGS 112
Query: 129 YLV 131
+LV
Sbjct: 113 FLV 115
>pdb|3D3W|B Chain B, Structure Of L-Xylulose Reductase With Bound Coenzyme,
Phosphate And Hydroxide
Length = 245
Score = 36.2 bits (82), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 52/123 (42%), Gaps = 3/123 (2%)
Query: 142 AVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYL-KK 200
A A+ G +D+LVNNA+ L + +D ++N R VSQ L +
Sbjct: 66 ATERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIAR 125
Query: 201 SNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPRTAI 260
I+N+S + NH Y +K + M MA E I VNA+ P T +
Sbjct: 126 GVPGAIVNVSSQCX-SQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNP-TVV 183
Query: 261 YTA 263
T+
Sbjct: 184 MTS 186
Score = 28.9 bits (63), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 6/67 (8%)
Query: 69 PCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGT 128
P VD+ D A + A+ + G +D+LVNNA+ L + +D ++N R
Sbjct: 56 PVCVDLGDWEATERALGS----VGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRA- 110
Query: 129 YLVKASQ 135
+++ SQ
Sbjct: 111 -VIQVSQ 116
>pdb|3PXX|A Chain A, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Avium Bound To Nicotinamide Adenine
Dinucleotide
pdb|3PXX|B Chain B, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Avium Bound To Nicotinamide Adenine
Dinucleotide
pdb|3PXX|C Chain C, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Avium Bound To Nicotinamide Adenine
Dinucleotide
pdb|3PXX|D Chain D, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Avium Bound To Nicotinamide Adenine
Dinucleotide
pdb|3PXX|E Chain E, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Avium Bound To Nicotinamide Adenine
Dinucleotide
pdb|3PXX|F Chain F, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Avium Bound To Nicotinamide Adenine
Dinucleotide
Length = 287
Score = 36.2 bits (82), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 56 AAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLK 115
A EVE G VD+RD AV + AV +FG +D++V NA L A+ P++
Sbjct: 62 AGLEVEKTGRKAYTAEVDVRDRAAVSRELANAVAEFGKLDVVVANAGICPL--GAHLPVQ 119
Query: 116 KY 117
+
Sbjct: 120 AF 121
>pdb|3CNU|A Chain A, Crystal Structure Of The Predicted Coding Region Af_1534
From Archaeoglobus Fulgidus
Length = 116
Score = 36.2 bits (82), Expect = 0.037, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 26/43 (60%)
Query: 364 FIALFEGKLKPTSAFMTGKLKISGNLQKAMKLEKLMGALKSKL 406
++A+ +G+ P S FM GK +I GN+ +A +L ++ + K
Sbjct: 72 WLAVLKGQEDPVSGFMMGKYRIEGNIMEAQRLAGVIKKFQGKF 114
>pdb|1XKQ|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF
Unknown Function From Caenorhabditis Elegans With
Cofactor
pdb|1XKQ|B Chain B, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF
Unknown Function From Caenorhabditis Elegans With
Cofactor
pdb|1XKQ|C Chain C, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF
Unknown Function From Caenorhabditis Elegans With
Cofactor
pdb|1XKQ|D Chain D, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF
Unknown Function From Caenorhabditis Elegans With
Cofactor
Length = 280
Score = 35.8 bits (81), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 43/98 (43%), Gaps = 4/98 (4%)
Query: 6 KLSGLTIFITGASRXXXXXXXXXXXXXXXNIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
+ S T+ ITG+S N+ I +++E + I + V +
Sbjct: 3 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSG--VSEKQV 60
Query: 66 NCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASA 103
N + + D+ E +N+ + +FG ID+LVNNA A
Sbjct: 61 NSV--VADVTTEDGQDQIINSTLKQFGKIDVLVNNAGA 96
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 56/119 (47%), Gaps = 8/119 (6%)
Query: 143 VNAAVDKFGGIDILVNNASAISLTDTANTP-----LKKYDLMNQINARGTYLVSQKCLPY 197
+N+ + +FG ID+LVNNA A ++ D T + Y ++N + +++K P+
Sbjct: 77 INSTLKQFGKIDVLVNNAGA-AIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPH 135
Query: 198 LKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
L S I+N+S + P + + Y I+K + A + I VN++ P
Sbjct: 136 LVASK-GEIVNVS-SIVAGPQAQPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSP 192
>pdb|3I3O|A Chain A, 2.06 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad-acetone
pdb|3I3O|B Chain B, 2.06 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad-acetone
pdb|3I3O|C Chain C, 2.06 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad-acetone
pdb|3I3O|D Chain D, 2.06 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad-acetone
pdb|3I3O|E Chain E, 2.06 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad-acetone
pdb|3I3O|F Chain F, 2.06 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad-acetone
pdb|3I3O|G Chain G, 2.06 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad-acetone
pdb|3I3O|H Chain H, 2.06 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad-acetone
Length = 291
Score = 35.8 bits (81), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 36/97 (37%), Gaps = 6/97 (6%)
Query: 6 KLSGLTIFITGASRXXXXXXXXXXXXXXXNIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
KL G + ITG NI IA E G + VE G
Sbjct: 44 KLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEE------GDANETKQYVEKEGV 97
Query: 66 NCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNAS 102
C+ D+ DE + V V + G ++ILVNN +
Sbjct: 98 KCVLLPGDLSDEQHCKDIVQETVRQLGSLNILVNNVA 134
>pdb|2C07|A Chain A, Oxoacyl-Acp Reductase Of Plasmodium Falciparum
Length = 285
Score = 35.8 bits (81), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 54/128 (42%), Gaps = 2/128 (1%)
Query: 129 YLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTY 188
Y S+ EI +N + + +DILVNNA +++ + + N +
Sbjct: 98 YAGDVSKKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLF 157
Query: 189 LVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDN 248
++Q + + + I+NIS + L Y+ SK G+ +A+E N
Sbjct: 158 YITQPISKRMINNRYGRIINISSIVGLTGNV--GQANYSSSKAGVIGFTKSLAKELASRN 215
Query: 249 IAVNALWP 256
I VNA+ P
Sbjct: 216 ITVNAIAP 223
>pdb|2CF2|E Chain E, Architecture Of Mammalian Fatty Acid Synthase
pdb|2CF2|N Chain N, Architecture Of Mammalian Fatty Acid Synthase
Length = 226
Score = 35.8 bits (81), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 48/118 (40%), Gaps = 11/118 (9%)
Query: 139 IQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYL 198
I+S + +FG +DILVNNA ++++ + + N + +S+ + +
Sbjct: 66 IESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAM 125
Query: 199 KKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
K H I+ I N Y +K G+ + +A E I VN + P
Sbjct: 126 MKKRHGRIITIGGQAN-----------YAAAKAGLIGFSKSLAREVASRGITVNVVAP 172
Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 38 IAAKTAEPHPKLPGTIYS--AAKEVED-AGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGI 94
IA A K+ GT S A+ + D G N ++++ D +++S + +FG +
Sbjct: 21 IAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEV 80
Query: 95 DILVNNA 101
DILVNNA
Sbjct: 81 DILVNNA 87
>pdb|3IJR|A Chain A, 2.05 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad+
pdb|3IJR|B Chain B, 2.05 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad+
pdb|3IJR|C Chain C, 2.05 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad+
pdb|3IJR|D Chain D, 2.05 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad+
pdb|3IJR|E Chain E, 2.05 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad+
pdb|3IJR|F Chain F, 2.05 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad+
pdb|3IJR|G Chain G, 2.05 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad+
pdb|3IJR|H Chain H, 2.05 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad+
Length = 291
Score = 35.4 bits (80), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 36/97 (37%), Gaps = 6/97 (6%)
Query: 6 KLSGLTIFITGASRXXXXXXXXXXXXXXXNIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
KL G + ITG NI IA E G + VE G
Sbjct: 44 KLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEE------GDANETKQYVEKEGV 97
Query: 66 NCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNAS 102
C+ D+ DE + V V + G ++ILVNN +
Sbjct: 98 KCVLLPGDLSDEQHCKDIVQETVRQLGSLNILVNNVA 134
>pdb|4G81|D Chain D, Crystal Structure Of A Hexonate Dehydrogenase Ortholog
(Target Efi- 506402 From Salmonella Enterica, Unliganded
Structure
pdb|4G81|A Chain A, Crystal Structure Of A Hexonate Dehydrogenase Ortholog
(Target Efi- 506402 From Salmonella Enterica, Unliganded
Structure
pdb|4G81|B Chain B, Crystal Structure Of A Hexonate Dehydrogenase Ortholog
(Target Efi- 506402 From Salmonella Enterica, Unliganded
Structure
pdb|4G81|C Chain C, Crystal Structure Of A Hexonate Dehydrogenase Ortholog
(Target Efi- 506402 From Salmonella Enterica, Unliganded
Structure
Length = 255
Score = 35.4 bits (80), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 96/226 (42%), Gaps = 20/226 (8%)
Query: 93 GIDILVNNASAISLTDTANTPLKK-YDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFG 151
G +++N+ A L ++ +T +K YD A G + L I++A + +
Sbjct: 33 GARVILNDIRATLLAESVDTLTRKGYD------AHGVAF-DVTDELAIEAAFSKLDAEGI 85
Query: 152 GIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYL-KKSNHAHILNIS 210
+DIL+NNA L+ + + N +LVS+ + +++ I+NI
Sbjct: 86 HVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIG 145
Query: 211 PPLNLNPFWFKNHVA-YTISKYGMSMCALGMAEEFKGDNIAVNALWPR---TAIYTAAIE 266
+L + VA YT +K G+ M MA E+ NI NA+ P T + TA IE
Sbjct: 146 ---SLTSQAARPTVAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIE 202
Query: 267 --MLTGGSADAKATSR--KPEIMADAAYYILSSNPPSLTGQFLIDD 308
+ + R +PE + A ++ S + GQ + D
Sbjct: 203 DKQFDSWVKSSTPSQRWGRPEELIGTAIFLSSKASDYINGQIIYVD 248
>pdb|1WMA|A Chain A, Crystal Structure Of Human Cbr1 In Complex With Hydroxy-pp
pdb|3BHI|A Chain A, Crystal Structure Of Human Carbonyl Reductase 1 In Complex
With Nadp
pdb|3BHJ|A Chain A, Crystal Structure Of Human Carbonyl Reductase 1 In Complex
With Glutathione
pdb|3BHM|A Chain A, Crystal Structure Of Human Carbonyl Reductase 1 In Complex
With S-Hydroxymethylglutathione
Length = 276
Score = 35.4 bits (80), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 88/212 (41%), Gaps = 67/212 (31%)
Query: 149 KFGGIDILVNNASAISLTDTANTPLK-KYDLMNQINARGTYLVSQKCLPYLKKS----NH 203
++GG+D+LVNNA I+ TP + ++ + N GT V + LP +K N
Sbjct: 79 EYGGLDVLVNNA-GIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNV 137
Query: 204 AHILNI------SPPLN----------------LNPF-------------WFKNHVAYTI 228
+ I+++ SP L +N F W + AY +
Sbjct: 138 SSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSS--AYGV 195
Query: 229 SKYGMSMC----ALGMAEEFKGDNIAVNAL---WPRTAIYTAAIEMLTGGSADAKATSRK 281
+K G+++ A ++E+ KGD I +NA W RT + A KAT +
Sbjct: 196 TKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDM------------AGPKAT-KS 242
Query: 282 PEIMADAAYYILSSNPPSLT---GQFLIDDEV 310
PE A+ Y L+ PP GQF+ + V
Sbjct: 243 PEEGAETPVY-LALLPPDAEGPHGQFVSEKRV 273
>pdb|3KSU|A Chain A, Crystal Structure Of Short-Chain Dehydrogenase From
Oenococcus Oeni Psu-1
pdb|3KSU|B Chain B, Crystal Structure Of Short-Chain Dehydrogenase From
Oenococcus Oeni Psu-1
Length = 262
Score = 35.4 bits (80), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 31/72 (43%)
Query: 59 EVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYD 118
E+ED G D+ +E V + A +FG +DI +N + T ++D
Sbjct: 57 ELEDQGAKVALYQSDLSNEEEVAKLFDFAEKEFGKVDIAINTVGKVLKKPIVETSEAEFD 116
Query: 119 LMNQINARGTYL 130
M+ IN + Y
Sbjct: 117 AMDTINNKVAYF 128
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 62/150 (41%), Gaps = 6/150 (4%)
Query: 107 TDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLT 166
+DTAN K +L +Q Y S E+ + A +FG +DI +N +
Sbjct: 48 SDTANKL--KDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKEFGKVDIAINTVGKVLKK 105
Query: 167 DTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAY 226
T ++D M+ IN + Y ++ ++ + HI+ I+ L F + Y
Sbjct: 106 PIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPN--GHIITIATSLLAAYTGF--YSTY 161
Query: 227 TISKYGMSMCALGMAEEFKGDNIAVNALWP 256
+K + ++E I+VNA+ P
Sbjct: 162 AGNKAPVEHYTRAASKELMKQQISVNAIAP 191
>pdb|1HXH|A Chain A, Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID
Dehydrogenase
pdb|1HXH|B Chain B, Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID
Dehydrogenase
pdb|1HXH|C Chain C, Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID
Dehydrogenase
pdb|1HXH|D Chain D, Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID
Dehydrogenase
Length = 253
Score = 35.4 bits (80), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 61/123 (49%), Gaps = 7/123 (5%)
Query: 143 VNAAVDK-FGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKS 201
V AAV + G +++LVNNA + D L+ + + +IN ++ Q+ + +K++
Sbjct: 70 VMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKET 129
Query: 202 NHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMC--ALGMAEEFKGDNIAVNALWPRTA 259
I+N++ + P + + Y+ SK +S A ++ +G I VN++ P
Sbjct: 130 G-GSIINMASVSSWLP--IEQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHP-DG 185
Query: 260 IYT 262
IYT
Sbjct: 186 IYT 188
>pdb|2PFG|A Chain A, Crystal Structure Of Human Cbr1 In Complex With Bigf2
Length = 276
Score = 35.4 bits (80), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 88/212 (41%), Gaps = 67/212 (31%)
Query: 149 KFGGIDILVNNASAISLTDTANTPLK-KYDLMNQINARGTYLVSQKCLPYLKKS----NH 203
++GG+D+LVNNA I+ TP + ++ + N GT V + LP +K N
Sbjct: 79 EYGGLDVLVNNA-GIAFKVADPTPFHIQAEVTMKTNFFGTRDVXTELLPLIKPQGRVVNV 137
Query: 204 AHILNI------SPPLN----------------LNPF-------------WFKNHVAYTI 228
+ I+++ SP L +N F W + AY +
Sbjct: 138 SSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSS--AYGV 195
Query: 229 SKYGMSMC----ALGMAEEFKGDNIAVNAL---WPRTAIYTAAIEMLTGGSADAKATSRK 281
+K G+++ A ++E+ KGD I +NA W RT + A KAT +
Sbjct: 196 TKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDM------------AGPKAT-KS 242
Query: 282 PEIMADAAYYILSSNPPSLT---GQFLIDDEV 310
PE A+ Y L+ PP GQF+ + V
Sbjct: 243 PEEGAETPVY-LALLPPDAEGPHGQFVSEKRV 273
>pdb|4IQG|C Chain C, Crystal Structure Of Bpro0239 Oxidoreductase From
Polaromonas Sp. Js666 In Nadp Bound Form
pdb|4IQG|A Chain A, Crystal Structure Of Bpro0239 Oxidoreductase From
Polaromonas Sp. Js666 In Nadp Bound Form
pdb|4IQG|B Chain B, Crystal Structure Of Bpro0239 Oxidoreductase From
Polaromonas Sp. Js666 In Nadp Bound Form
pdb|4IQG|D Chain D, Crystal Structure Of Bpro0239 Oxidoreductase From
Polaromonas Sp. Js666 In Nadp Bound Form
Length = 271
Score = 35.4 bits (80), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 52/114 (45%), Gaps = 9/114 (7%)
Query: 149 KFGGIDILVNNASAISLTDTAN-TPLKKYDLMNQINARGTYLVSQKCLPYLKK---SNHA 204
+ G + LVNNA + T + L++ +IN G++L +++ + +
Sbjct: 100 QLGRLSALVNNAGVVDQTTRVDGITLERLQRXFEINVFGSFLCAREAVKRXSTRYGGSGG 159
Query: 205 HILNISPPLNL--NPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
I+N+S +P +V Y +K + LG+A+E + I VNA+ P
Sbjct: 160 SIVNVSSAAARLGSP---GQYVDYAAAKGAIDTFTLGLAKEVATEGIRVNAVRP 210
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 41/96 (42%), Gaps = 8/96 (8%)
Query: 58 KEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTAN-TPLKK 116
+++ +AGG L D+ E V + + G + LVNNA + T + L++
Sbjct: 68 RQIREAGGQALAVQADVAKEREVLAXFETVDAQLGRLSALVNNAGVVDQTTRVDGITLER 127
Query: 117 YDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGG 152
+IN G++L + AV ++GG
Sbjct: 128 LQRXFEINVFGSFLCA-------REAVKRXSTRYGG 156
>pdb|2GDZ|A Chain A, Crystal Structure Of 15-Hydroxyprostaglandin Dehydrogenase
Type1, Complexed With Nad+
Length = 267
Score = 35.0 bits (79), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 45/105 (42%), Gaps = 22/105 (20%)
Query: 73 DIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQIN----ARGT 128
D+ D+ ++ VD FG +DILVNNA K ++ QIN GT
Sbjct: 66 DVADQQQLRDTFRKVVDHFGRLDILVNNAGV--------NNEKNWEKTLQINLVSVISGT 117
Query: 129 YLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPL 173
YL GL+ S N GG I++N +S L A P+
Sbjct: 118 YL-----GLDYMSKQNGGE---GG--IIINMSSLAGLMPVAQQPV 152
>pdb|1I01|A Chain A, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1I01|B Chain B, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1I01|C Chain C, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1I01|D Chain D, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1I01|E Chain E, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1I01|F Chain F, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1I01|G Chain G, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1I01|H Chain H, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1Q7B|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase From E. Coli
In Complex With Nadp+
pdb|1Q7B|B Chain B, The Structure Of Betaketoacyl-[acp] Reductase From E. Coli
In Complex With Nadp+
pdb|1Q7B|C Chain C, The Structure Of Betaketoacyl-[acp] Reductase From E. Coli
In Complex With Nadp+
pdb|1Q7B|D Chain D, The Structure Of Betaketoacyl-[acp] Reductase From E. Coli
In Complex With Nadp+
Length = 244
Score = 34.7 bits (78), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 26/118 (22%), Positives = 48/118 (40%), Gaps = 2/118 (1%)
Query: 139 IQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYL 198
I+S + +FG +DILVNNA ++++ + + N + +S+ + +
Sbjct: 66 IESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAM 125
Query: 199 KKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
K H I+ I + Y +K G+ + +A E I VN + P
Sbjct: 126 MKKRHGRIITIGSV--VGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAP 181
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 38 IAAKTAEPHPKLPGTIYS--AAKEVED-AGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGI 94
IA A K+ GT S A+ + D G N ++++ D +++S + +FG +
Sbjct: 21 IAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEV 80
Query: 95 DILVNNA 101
DILVNNA
Sbjct: 81 DILVNNA 87
>pdb|4DYV|A Chain A, Crystal Structure Of A Short-Chain DehydrogenaseREDUCTASE
SDR FROM Xanthobacter Autotrophicus Py2
Length = 272
Score = 34.7 bits (78), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
Query: 67 CLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
C+P D+ D +V++ A V+KFG +D+L NNA
Sbjct: 78 CVP--TDVTDPDSVRALFTATVEKFGRVDVLFNNA 110
Score = 28.9 bits (63), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 41/104 (39%), Gaps = 15/104 (14%)
Query: 139 IQSAVNAAVDKFGGIDILVNNAS----AISLTDTANTPLKKYDLMNQINARGTYLVSQKC 194
+++ A V+KFG +D+L NNA AI D ++ + N G +L +Q+
Sbjct: 89 VRALFTATVEKFGRVDVLFNNAGTGAPAIPXEDLT---FAQWKQVVDTNLTGPFLCTQEA 145
Query: 195 LPYLKKS--------NHAHILNISPPLNLNPFWFKNHVAYTISK 230
K N+ I SP P+ H ++K
Sbjct: 146 FRVXKAQEPRGGRIINNGSISATSPRPYSAPYTATKHAITGLTK 189
>pdb|3SJU|A Chain A, Hedamycin Polyketide Ketoreductase Bound To Nadph
pdb|3SJU|B Chain B, Hedamycin Polyketide Ketoreductase Bound To Nadph
Length = 279
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 58/121 (47%), Gaps = 4/121 (3%)
Query: 138 EIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY 197
E+ +AV AAV++FG I ILVN+A +TA+ + + N G + V+++ L
Sbjct: 87 EVHAAVAAAVERFGPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRA 146
Query: 198 --LKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALW 255
++++ I+NI+ + YT SK+G+ + E I VNA+
Sbjct: 147 GGMREAGWGRIVNIASTGGKQGVMYA--APYTASKHGVVGFTKSVGFELAKTGITVNAVC 204
Query: 256 P 256
P
Sbjct: 205 P 205
>pdb|4IBO|A Chain A, Crystal Structure Of A Putative Gluconate Dehydrogenase
From Agrobacterium Tumefaciens (Target Efi-506446)
pdb|4IBO|B Chain B, Crystal Structure Of A Putative Gluconate Dehydrogenase
From Agrobacterium Tumefaciens (Target Efi-506446)
pdb|4IBO|C Chain C, Crystal Structure Of A Putative Gluconate Dehydrogenase
From Agrobacterium Tumefaciens (Target Efi-506446)
pdb|4IBO|D Chain D, Crystal Structure Of A Putative Gluconate Dehydrogenase
From Agrobacterium Tumefaciens (Target Efi-506446)
Length = 271
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 65/164 (39%), Gaps = 11/164 (6%)
Query: 153 IDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPP 212
+DILVNNA + + N +++ ++ + + I+NI
Sbjct: 104 VDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIG-- 161
Query: 213 LNLNPFWFKNHVA-YTISKYGMSMCALGMAEEFKGDNIAVNALWPRTAIYTAAIEMLTGG 271
+L + VA YT++K G+ M MA E+ I NA+ P + ++
Sbjct: 162 -SLTSELARATVAPYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALIDNP 220
Query: 272 SADAKATSR-------KPEIMADAAYYILSSNPPSLTGQFLIDD 308
DA +R KP+ + A ++ +S + GQ + D
Sbjct: 221 EFDAWVKARTPAKRWGKPQELVGTAVFLSASASDYVNGQIIYVD 264
>pdb|3A28|C Chain C, Crystal Structure Of L-2,3-Butanediol Dehydrogenase
pdb|3A28|D Chain D, Crystal Structure Of L-2,3-Butanediol Dehydrogenase
pdb|3A28|A Chain A, Crystal Structure Of L-2,3-Butanediol Dehydrogenase
pdb|3A28|B Chain B, Crystal Structure Of L-2,3-Butanediol Dehydrogenase
pdb|3A28|E Chain E, Crystal Structure Of L-2,3-Butanediol Dehydrogenase
pdb|3A28|F Chain F, Crystal Structure Of L-2,3-Butanediol Dehydrogenase
pdb|3A28|G Chain G, Crystal Structure Of L-2,3-Butanediol Dehydrogenase
pdb|3A28|H Chain H, Crystal Structure Of L-2,3-Butanediol Dehydrogenase
Length = 258
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 26/44 (59%)
Query: 58 KEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
K +E A + +D+ D+ SA++ A +K GG D+LVNNA
Sbjct: 46 KLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGGFDVLVNNA 89
>pdb|1BDB|A Chain A, Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase From
Pseudomonas Sp. Lb400
Length = 277
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 53/134 (39%), Gaps = 16/134 (11%)
Query: 6 KLSGLTIFITGASRXXXXXXXXXXXXXXXNIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
KL G + ITG + + + K+AE +L D G
Sbjct: 2 KLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELE----------TDHGD 51
Query: 66 NCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNAS----AISLTDTANTPLK-KYDLM 120
N L + D+R + A + V +FG ID L+ NA + +L D L +D +
Sbjct: 52 NVLGIVGDVRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEV 111
Query: 121 NQINARG-TYLVKA 133
IN +G + VKA
Sbjct: 112 FHINVKGYIHAVKA 125
>pdb|1U7T|A Chain A, Crystal Structure Of AbadHSD10 WITH A BOUND INHIBITOR
pdb|1U7T|B Chain B, Crystal Structure Of AbadHSD10 WITH A BOUND INHIBITOR
pdb|1U7T|C Chain C, Crystal Structure Of AbadHSD10 WITH A BOUND INHIBITOR
pdb|1U7T|D Chain D, Crystal Structure Of AbadHSD10 WITH A BOUND INHIBITOR
Length = 261
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 6/72 (8%)
Query: 64 GGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTP------LKKY 117
G NC+ D+ E VQ+A+ A KFG +D+ VN A + T N L+ +
Sbjct: 55 GNNCVFAPADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDF 114
Query: 118 DLMNQINARGTY 129
+ +N GT+
Sbjct: 115 QRVLDVNLMGTF 126
>pdb|3GED|A Chain A, Fingerprint And Structural Analysis Of A Apo Scor Enzyme
From Clostridium Thermocellum
pdb|3GED|B Chain B, Fingerprint And Structural Analysis Of A Apo Scor Enzyme
From Clostridium Thermocellum
pdb|3GEG|A Chain A, Fingerprint And Structural Analysis Of A Scor Enzyme With
Its Bound Cofactor From Clostridium Thermocellum
pdb|3GEG|B Chain B, Fingerprint And Structural Analysis Of A Scor Enzyme With
Its Bound Cofactor From Clostridium Thermocellum
Length = 247
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 137 LEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLP 196
L ++ V A++K ID+LVNNA S ++ +++D + + + Y +S+ C
Sbjct: 60 LTLKKFVEYAMEKLQRIDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRD 119
Query: 197 YLKKSNHAHILNIS 210
L K N I+NI+
Sbjct: 120 ELIK-NKGRIINIA 132
>pdb|1SO8|A Chain A, Abeta-bound Human Abad Structure [also Known As
3-hydroxyacyl-coa Dehydrogenase Type Ii (type Ii Hadh),
Endoplasmic Reticulum- Associated Amyloid Beta-peptide
Binding Protein (erab)]
Length = 261
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 6/72 (8%)
Query: 64 GGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTP------LKKY 117
G NC+ D+ E VQ+A+ A KFG +D+ VN A + T N L+ +
Sbjct: 55 GNNCVFAPADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDF 114
Query: 118 DLMNQINARGTY 129
+ +N GT+
Sbjct: 115 QRVLDVNLMGTF 126
>pdb|2O23|A Chain A, The Structure Of Wild-Type Human Hadh2
(17beta-Hydroxysteroid Dehydrogenase Type 10) Bound To
Nad+ At 1.2 A
pdb|2O23|B Chain B, The Structure Of Wild-Type Human Hadh2
(17beta-Hydroxysteroid Dehydrogenase Type 10) Bound To
Nad+ At 1.2 A
Length = 265
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 6/72 (8%)
Query: 64 GGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTP------LKKY 117
G NC+ D+ E VQ+A+ A KFG +D+ VN A + T N L+ +
Sbjct: 57 GNNCVFAPADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDF 116
Query: 118 DLMNQINARGTY 129
+ +N GT+
Sbjct: 117 QRVLDVNLMGTF 128
>pdb|4FGS|A Chain A, Crystal Structure Of A Probable Dehydrogenase Protein
pdb|4FGS|B Chain B, Crystal Structure Of A Probable Dehydrogenase Protein
pdb|4FGS|C Chain C, Crystal Structure Of A Probable Dehydrogenase Protein
pdb|4FGS|D Chain D, Crystal Structure Of A Probable Dehydrogenase Protein
Length = 273
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 51/140 (36%), Gaps = 12/140 (8%)
Query: 136 GLEIQSAVNAAVDKF--------GGIDILVNNASAISLTDTANTPLKKYDLMNQINARGT 187
G++ SA A +D+ G ID+L NA S ++YD N +G
Sbjct: 79 GIQADSANLAELDRLYEKVKAEAGRIDVLFVNAGGGSXLPLGEVTEEQYDDTFDRNVKGV 138
Query: 188 YLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGD 247
QK LP L + + + + P + Y SK + A + K
Sbjct: 139 LFTVQKALPLLARGSSVVLTGSTAGSTGTPAF----SVYAASKAALRSFARNWILDLKDR 194
Query: 248 NIAVNALWPRTAIYTAAIEM 267
I +N L P T +E+
Sbjct: 195 GIRINTLSPGPTETTGLVEL 214
>pdb|1Q7C|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase Y151f Mutant
In Complex With Nadph Fragment
pdb|1Q7C|B Chain B, The Structure Of Betaketoacyl-[acp] Reductase Y151f Mutant
In Complex With Nadph Fragment
Length = 244
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/118 (21%), Positives = 48/118 (40%), Gaps = 2/118 (1%)
Query: 139 IQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYL 198
I+S + +FG +DILVNNA ++++ + + N + +S+ + +
Sbjct: 66 IESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAM 125
Query: 199 KKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
K H I+ I + + +K G+ + +A E I VN + P
Sbjct: 126 MKKRHGRIITIGSV--VGTMGNGGQANFAAAKAGLIGFSKSLAREVASRGITVNVVAP 181
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 38 IAAKTAEPHPKLPGTIYS--AAKEVED-AGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGI 94
IA A K+ GT S A+ + D G N ++++ D +++S + +FG +
Sbjct: 21 IAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEV 80
Query: 95 DILVNNA 101
DILVNNA
Sbjct: 81 DILVNNA 87
>pdb|3BN8|A Chain A, Crystal Structure Of A Putative Sterol Carrier Protein
Type 2 (Af1534) From Archaeoglobus Fulgidus Dsm 4304 At
2.11 A Resolution
pdb|3BN8|B Chain B, Crystal Structure Of A Putative Sterol Carrier Protein
Type 2 (Af1534) From Archaeoglobus Fulgidus Dsm 4304 At
2.11 A Resolution
Length = 128
Score = 33.5 bits (75), Expect = 0.25, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 25/43 (58%)
Query: 364 FIALFEGKLKPTSAFMTGKLKISGNLQKAMKLEKLMGALKSKL 406
++A+ +G+ P S F GK +I GN+ +A +L ++ + K
Sbjct: 84 WLAVLKGQEDPVSGFXXGKYRIEGNIXEAQRLAGVIKKFQGKF 126
>pdb|3NYW|A Chain A, Crystal Structure Of A Betaketoacyl-[acp] Reductase (Fabg)
From Bacteroides Thetaiotaomicron
pdb|3NYW|B Chain B, Crystal Structure Of A Betaketoacyl-[acp] Reductase (Fabg)
From Bacteroides Thetaiotaomicron
pdb|3NYW|C Chain C, Crystal Structure Of A Betaketoacyl-[acp] Reductase (Fabg)
From Bacteroides Thetaiotaomicron
pdb|3NYW|D Chain D, Crystal Structure Of A Betaketoacyl-[acp] Reductase (Fabg)
From Bacteroides Thetaiotaomicron
Length = 250
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 55/124 (44%), Gaps = 6/124 (4%)
Query: 6 KLSGLTIFITGASRXXXXXXXXXXXXXXXNIVIAAKTAEPHPKLPGTIYSAAKEVEDAGG 65
K GL I ITGAS+ +V+ A++ + K+ I + K V++
Sbjct: 5 KQKGLAI-ITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIXRSNKHVQEP-- 61
Query: 66 NCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINA 125
LP +DI D + + K+G +DILV NA+A + + P+ + + +IN
Sbjct: 62 IVLP--LDITDCTKADTEIKDIHQKYGAVDILV-NAAAXFXDGSLSEPVDNFRKIXEINV 118
Query: 126 RGTY 129
Y
Sbjct: 119 IAQY 122
Score = 32.3 bits (72), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 46/108 (42%), Gaps = 3/108 (2%)
Query: 149 KFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILN 208
K+G +DILV NA+A + + P+ + + +IN Y + + K + +I N
Sbjct: 84 KYGAVDILV-NAAAXFXDGSLSEPVDNFRKIXEINVIAQYGILKTVTEIXKVQKNGYIFN 142
Query: 209 ISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
++ + F + Y +K+ + A + E I V L P
Sbjct: 143 VAS--RAAKYGFADGGIYGSTKFALLGLAESLYRELAPLGIRVTTLCP 188
>pdb|1IWP|A Chain A, Glycerol Dehydratase-Cyanocobalamin Complex Of Klebsiella
Pneumoniae
pdb|1IWP|L Chain L, Glycerol Dehydratase-Cyanocobalamin Complex Of Klebsiella
Pneumoniae
pdb|1MMF|A Chain A, Crystal Structure Of Substrate Free Form Of Glycerol
Dehydratase
pdb|1MMF|L Chain L, Crystal Structure Of Substrate Free Form Of Glycerol
Dehydratase
Length = 555
Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 153 IDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNI 209
+DI V+ I++T TA TP K ++M Q+N + QK SN H+ N+
Sbjct: 93 VDIHVSREEIIAIT-TAITPAKAVEVMAQMNVVEMMMALQKMRARRTPSNQCHVTNL 148
>pdb|3I4F|A Chain A, Structure Of Putative 3-oxoacyl-reductase From Bacillus
Thuringiensis
pdb|3I4F|B Chain B, Structure Of Putative 3-oxoacyl-reductase From Bacillus
Thuringiensis
pdb|3I4F|C Chain C, Structure Of Putative 3-oxoacyl-reductase From Bacillus
Thuringiensis
pdb|3I4F|D Chain D, Structure Of Putative 3-oxoacyl-reductase From Bacillus
Thuringiensis
Length = 264
Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 49/122 (40%), Gaps = 4/122 (3%)
Query: 138 EIQSAVNAAVDKFGGIDILVNNAS--AISLTDTANTPLKKYDLMNQINARGTYLVSQKCL 195
++ V A+ FG ID L+NNA + +++ M Q N + + + +
Sbjct: 71 DLHKIVEEAMSHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVV 130
Query: 196 PYLKKSNHAHILNIS-PPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNAL 254
P ++K N I+N + P W A+ +K G+ +A E I N +
Sbjct: 131 PVMRKQNFGRIINYGFQGADSAPGWIYRS-AFAAAKVGLVSLTKTVAYEEAEYGITANMV 189
Query: 255 WP 256
P
Sbjct: 190 CP 191
>pdb|3U9L|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein]
Reductase (Nadph) From Sinorhizobium Meliloti
Length = 324
Score = 32.7 bits (73), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 49/107 (45%), Gaps = 10/107 (9%)
Query: 121 NQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMN 180
N ++ R L SQ + + A++ + + G ID+L++NA +++ +
Sbjct: 57 NDVDLRTLELDVQSQ-VSVDRAIDQIIGEDGRIDVLIHNAGHXVFGPAEAFTPEQFAELY 115
Query: 181 QINARGTYLVSQKCLPYLKKSNHAHILNI--------SPPLNLNPFW 219
IN T V++ LP+ ++ H ++ I +PP L P++
Sbjct: 116 DINVLSTQRVNRAALPHXRRQKHGLLIWISSSSSAGGTPPY-LAPYF 161
>pdb|2AG5|A Chain A, Crystal Structure Of Human Dhrs6
pdb|2AG5|B Chain B, Crystal Structure Of Human Dhrs6
pdb|2AG5|C Chain C, Crystal Structure Of Human Dhrs6
pdb|2AG5|D Chain D, Crystal Structure Of Human Dhrs6
Length = 246
Score = 32.3 bits (72), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 48/116 (41%), Gaps = 5/116 (4%)
Query: 147 VDKFGG----IDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSN 202
+D+F +D+L N A + + K +D +N R YL+ + LP +
Sbjct: 65 IDQFANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQK 124
Query: 203 HAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPRT 258
+I+N+S + + N Y+ +K + +A +F I N + P T
Sbjct: 125 SGNIINMSSVAS-SVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGT 179
>pdb|1ZEM|A Chain A, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase
pdb|1ZEM|B Chain B, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase
pdb|1ZEM|C Chain C, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase
pdb|1ZEM|D Chain D, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase
pdb|1ZEM|E Chain E, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase
pdb|1ZEM|F Chain F, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase
pdb|1ZEM|G Chain G, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase
pdb|1ZEM|H Chain H, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase
Length = 262
Score = 32.3 bits (72), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 22/46 (47%)
Query: 56 AAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNA 101
A V + G + D+ E AV V++ V FG ID L NNA
Sbjct: 47 AEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKIDFLFNNA 92
>pdb|3GEM|A Chain A, Crystal Structure Of Short-Chain Dehydrogenase From
Pseudomonas Syringae
pdb|3GEM|B Chain B, Crystal Structure Of Short-Chain Dehydrogenase From
Pseudomonas Syringae
pdb|3GEM|C Chain C, Crystal Structure Of Short-Chain Dehydrogenase From
Pseudomonas Syringae
pdb|3GEM|D Chain D, Crystal Structure Of Short-Chain Dehydrogenase From
Pseudomonas Syringae
Length = 260
Score = 32.0 bits (71), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 44/101 (43%), Gaps = 4/101 (3%)
Query: 156 LVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNL 215
+V+NAS L +T + ++ YL++ C P L S A I++IS ++
Sbjct: 103 VVHNASEW-LAETPGEEADNFTRXFSVHXLAPYLINLHCEPLLTASEVADIVHISD--DV 159
Query: 216 NPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
H+AY +K G+ L A F + VN + P
Sbjct: 160 TRKGSSKHIAYCATKAGLESLTLSFAARF-APLVKVNGIAP 199
>pdb|4FN4|A Chain A, Short-chain Nad(h)-dependent Dehydrogenase/reductase From
Sulfolobus Acidocaldarius
pdb|4FN4|B Chain B, Short-chain Nad(h)-dependent Dehydrogenase/reductase From
Sulfolobus Acidocaldarius
pdb|4FN4|C Chain C, Short-chain Nad(h)-dependent Dehydrogenase/reductase From
Sulfolobus Acidocaldarius
pdb|4FN4|D Chain D, Short-chain Nad(h)-dependent Dehydrogenase/reductase From
Sulfolobus Acidocaldarius
Length = 254
Score = 32.0 bits (71), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 64/150 (42%), Gaps = 11/150 (7%)
Query: 118 DLMNQI--NARG----TYLVKA--SQGLEIQSAVNAAVDKFGGIDILVNNASAI-SLTDT 168
D +NQI RG VKA S+ +++ V + + ID+L NNA + +T
Sbjct: 42 DRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPV 101
Query: 169 ANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTI 228
A + ++ + +N + S+ +P + K I+N + + + YT+
Sbjct: 102 AEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGF--AGAPYTV 159
Query: 229 SKYGMSMCALGMAEEFKGDNIAVNALWPRT 258
+K+G+ +A + I A+ P T
Sbjct: 160 AKHGLIGLTRSIAAHYGDQGIRAVAVLPGT 189
>pdb|3GDF|A Chain A, Crystal Structure Of The Nadp-Dependent Mannitol
Dehydrogenase From Cladosporium Herbarum.
pdb|3GDF|B Chain B, Crystal Structure Of The Nadp-Dependent Mannitol
Dehydrogenase From Cladosporium Herbarum.
pdb|3GDF|C Chain C, Crystal Structure Of The Nadp-Dependent Mannitol
Dehydrogenase From Cladosporium Herbarum.
pdb|3GDF|D Chain D, Crystal Structure Of The Nadp-Dependent Mannitol
Dehydrogenase From Cladosporium Herbarum.
pdb|3GDG|A Chain A, Crystal Structure Of The Nadp-Dependent Mannitol
Dehydrogenase From Cladosporium Herbarum.
pdb|3GDG|B Chain B, Crystal Structure Of The Nadp-Dependent Mannitol
Dehydrogenase From Cladosporium Herbarum.
pdb|3GDG|C Chain C, Crystal Structure Of The Nadp-Dependent Mannitol
Dehydrogenase From Cladosporium Herbarum.
pdb|3GDG|D Chain D, Crystal Structure Of The Nadp-Dependent Mannitol
Dehydrogenase From Cladosporium Herbarum
Length = 267
Score = 32.0 bits (71), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 25/115 (21%), Positives = 56/115 (48%), Gaps = 3/115 (2%)
Query: 143 VNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSN 202
V V FG ID + NA A + + + ++ ++ + Q++ GT+ ++ + K+
Sbjct: 92 VKDVVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERG 151
Query: 203 HAHILNISPPLNLNPFWF-KNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
++ I+ ++ + F + +Y ++K G A +A E++ D VN++ P
Sbjct: 152 TGSLV-ITASMSGHIANFPQEQTSYNVAKAGCIHMARSLANEWR-DFARVNSISP 204
>pdb|3SJ7|A Chain A, Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) From
Staphylococcus Aureus Complex With Nadph
pdb|3SJ7|B Chain B, Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) From
Staphylococcus Aureus Complex With Nadph
Length = 252
Score = 31.6 bits (70), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 66/171 (38%), Gaps = 16/171 (9%)
Query: 13 FITGASRXXXXXXXXXXXXXXXNIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIV 72
+TGASR N+ A A K + +E++ G +
Sbjct: 14 LVTGASRGIGRSIALQLAEEGYNV--AVNYAGSKEKAEAVV----EEIKAKGVDSFAIQA 67
Query: 73 DIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTY--- 129
++ D V++ + V +FG +D+LVNNA +++D + N +G +
Sbjct: 68 NVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCI 127
Query: 130 ------LVKASQGLEIQ-SAVNAAVDKFGGIDILVNNASAISLTDTANTPL 173
+++ G I S+V AV G + + A I LT +A L
Sbjct: 128 QKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAAREL 178
>pdb|4IIN|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Helicobacter Pylori 26695
Complexed With Nad+
pdb|4IIN|B Chain B, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Helicobacter Pylori 26695
Complexed With Nad+
pdb|4IIN|C Chain C, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Helicobacter Pylori 26695
Complexed With Nad+
pdb|4IIN|D Chain D, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Helicobacter Pylori 26695
Complexed With Nad+
pdb|4IJK|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Helicobacter Pylori 26695
pdb|4IJK|B Chain B, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Helicobacter Pylori 26695
pdb|4IJK|C Chain C, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Helicobacter Pylori 26695
pdb|4IJK|D Chain D, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Helicobacter Pylori 26695
Length = 271
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 50/117 (42%), Gaps = 6/117 (5%)
Query: 142 AVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQI--NARGTYLVSQKCLPYLK 199
A+ V GG+ LVNNA + D +K D + I N ++ ++ L +
Sbjct: 97 AIQTIVQSDGGLSYLVNNAGVVR--DKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMS 154
Query: 200 KSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
KS ++N++ + + + Y+ SK GM + A E NI N++ P
Sbjct: 155 KSRFGSVVNVASIIGERGNMGQTN--YSASKGGMIAMSKSFAYEGALRNIRFNSVTP 209
>pdb|3JQ7|A Chain A, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 6- Phenylpteridine-2,4,7-Triamine
(Dx2)
pdb|3JQ7|C Chain C, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 6- Phenylpteridine-2,4,7-Triamine
(Dx2)
pdb|3JQ7|D Chain D, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 6- Phenylpteridine-2,4,7-Triamine
(Dx2)
pdb|3JQA|D Chain D, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 2-
Amino-1,9-Dihydro-6h-Purine-6-Thione (Dx4)
Length = 288
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 9/84 (10%)
Query: 102 SAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNAS 161
+A+SL D N ++ Q + + ++ AS + +N+ FG D+LVNNAS
Sbjct: 60 AAVSLADELNKERSNTAVVXQADLTNSNVLPAS----CEEIINSCFRAFGRCDVLVNNAS 115
Query: 162 AISLTDTANTPLKKYDLMNQINAR 185
A TPL + D + N +
Sbjct: 116 AFY-----PTPLVQGDHEDNSNGK 134
>pdb|3OSU|A Chain A, Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Protein
Reductase, Fabg, From Staphylococcus Aureus
pdb|3OSU|B Chain B, Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Protein
Reductase, Fabg, From Staphylococcus Aureus
Length = 246
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 53/126 (42%), Gaps = 10/126 (7%)
Query: 58 KEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKY 117
+E++ G + ++ D V++ + V +FG +D+LVNNA +++
Sbjct: 47 EEIKAKGVDSFAIQANVADADEVKAXIKEVVSQFGSLDVLVNNAGITRDNLLXRXKEQEW 106
Query: 118 DLMNQINARGTY----------LVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTD 167
D + N +G + L + S + S+V AV G + + A I LT
Sbjct: 107 DDVIDTNLKGVFNCIQKATPQXLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTK 166
Query: 168 TANTPL 173
+A L
Sbjct: 167 SAAREL 172
>pdb|2C7V|A Chain A, Structure Of Trypanosoma Brucei Pteridine Reductase (Ptr1)
In Ternary Complex With Cofactor And The Antifolate
Methotrexate
pdb|2C7V|B Chain B, Structure Of Trypanosoma Brucei Pteridine Reductase (Ptr1)
In Ternary Complex With Cofactor And The Antifolate
Methotrexate
pdb|2C7V|C Chain C, Structure Of Trypanosoma Brucei Pteridine Reductase (Ptr1)
In Ternary Complex With Cofactor And The Antifolate
Methotrexate
pdb|2C7V|D Chain D, Structure Of Trypanosoma Brucei Pteridine Reductase (Ptr1)
In Ternary Complex With Cofactor And The Antifolate
Methotrexate
Length = 268
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 9/84 (10%)
Query: 102 SAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNAS 161
+A+SL D N ++ Q + + ++ AS + +N+ FG D+LVNNAS
Sbjct: 40 AAVSLADELNKERSNTAVVXQADLTNSNVLPAS----CEEIINSCFRAFGRCDVLVNNAS 95
Query: 162 AISLTDTANTPLKKYDLMNQINAR 185
A TPL + D + N +
Sbjct: 96 AFY-----PTPLVQGDHEDNSNGK 114
>pdb|2Y93|A Chain A, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3-
Dehydrogenase (Bphb)from Pandoraea Pnomenusa Strain
B-356.
pdb|2Y93|B Chain B, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3-
Dehydrogenase (Bphb)from Pandoraea Pnomenusa Strain
B-356.
pdb|2Y99|A Chain A, Crystal Structure Of
Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase
(Bphb)from Pandoraea Pnomenusa Strain B-356 Complex With
Co-Enzyme Nad
pdb|2Y99|B Chain B, Crystal Structure Of
Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase
(Bphb)from Pandoraea Pnomenusa Strain B-356 Complex With
Co-Enzyme Nad
pdb|3ZV3|A Chain A, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3-
Dehydrogenase (Bphb)from Pandoraea Pnomenusa Strain B-
356 In Intermediate State Of Substrate Binding Loop
pdb|3ZV3|B Chain B, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3-
Dehydrogenase (Bphb)from Pandoraea Pnomenusa Strain B-
356 In Intermediate State Of Substrate Binding Loop
pdb|3ZV4|A Chain A, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3-
Dehydrogenase (Bphb) From Pandoraea Pnomenusa Strain B-
356 In Apo Form At 1.8 Angstrom
pdb|3ZV4|B Chain B, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3-
Dehydrogenase (Bphb) From Pandoraea Pnomenusa Strain B-
356 In Apo Form At 1.8 Angstrom
pdb|3ZV5|A Chain A, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3-
Dehydrogenase (Bphb) From Pandoraea Pnomenusa Strain B-
356 Complex With Co-Enzyme Nad And Product 2,3-
Dihydroxybiphenyl
pdb|3ZV5|B Chain B, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3-
Dehydrogenase (Bphb) From Pandoraea Pnomenusa Strain B-
356 Complex With Co-Enzyme Nad And Product 2,3-
Dihydroxybiphenyl
pdb|3ZV6|A Chain A, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3-
Dehydrogenase (Bphb) From Pandoraea Pnomenusa Strain B-
356 Complex With Co-Enzyme Nad And Product Analog 4,4'-
Dihydroxybiphenyl
pdb|3ZV6|B Chain B, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3-
Dehydrogenase (Bphb) From Pandoraea Pnomenusa Strain B-
356 Complex With Co-Enzyme Nad And Product Analog 4,4'-
Dihydroxybiphenyl
Length = 281
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 56/135 (41%), Gaps = 18/135 (13%)
Query: 6 KLSGLTIFITGASRXXXXXXXXXXXXXXXNIVIAAKTAEPHPKLPGTIYSAAKEVEDA-G 64
KL+G ITG + + + K+AE +L +E+E A G
Sbjct: 2 KLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAE---RL--------RELEVAHG 50
Query: 65 GNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISL-TDTANTPLKK----YDL 119
GN + + D+R + A + FG ID L+ NA T A+ P K +D
Sbjct: 51 GNAVGVVGDVRSLQDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDD 110
Query: 120 MNQINARG-TYLVKA 133
+ +N +G + VKA
Sbjct: 111 IFHVNVKGYIHAVKA 125
>pdb|3EZL|A Chain A, Crystal Structure Of Acetyacetyl-Coa Reductase From
Burkholderia Pseudomallei 1710b
Length = 256
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 49/110 (44%), Gaps = 6/110 (5%)
Query: 149 KFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYL--VSQKCLPYLKKSNHAHI 206
+ G ID+LVNNA D + + D I+ T L V+++ + + + I
Sbjct: 88 EVGEIDVLVNNAGITR--DVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRI 145
Query: 207 LNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
+NIS +N F Y+ +K G+ + +A+E + VN + P
Sbjct: 146 INIS-SVNGQKGQF-GQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSP 193
>pdb|3BMC|A Chain A, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Substrate (Folate)
pdb|3BMN|A Chain A, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Compound Ax3)
pdb|3BMO|B Chain B, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Compound Ax4)
pdb|3BMQ|A Chain A, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Compound Ax5)
pdb|3BMQ|D Chain D, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Compound Ax5)
pdb|3JQ8|B Chain B, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 6,7,7-
Trimethyl-7,8-Dihydropteridine-2,4-Diamine (Dx3)
pdb|3JQ8|C Chain C, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 6,7,7-
Trimethyl-7,8-Dihydropteridine-2,4-Diamine (Dx3)
pdb|3JQ8|D Chain D, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 6,7,7-
Trimethyl-7,8-Dihydropteridine-2,4-Diamine (Dx3)
pdb|3JQ9|C Chain C, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor
2-Amino-6-(1,3-Benzodioxol-5-Yl)-4-Oxo-4,7-
Dihydro-3h-Pyrrolo[2,3-D]pyrimidine-5-Carbonitrile (Ax1)
pdb|3JQ9|D Chain D, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor
2-Amino-6-(1,3-Benzodioxol-5-Yl)-4-Oxo-4,7-
Dihydro-3h-Pyrrolo[2,3-D]pyrimidine-5-Carbonitrile (Ax1)
pdb|3JQB|C Chain C, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor
2-Amino-5-(2-Phenylethyl)-3,7-Dihydro-4h-
Pyrrolo[2,3-D]pyrimidin-4-One (Dx6)
pdb|3JQD|A Chain A, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 2-
Amino-4-Oxo-6-Phenyl-4,7-Dihydro-3h-Pyrrolo[2,
3-D]pyrimidine-5- Carbonitrile (Dx7)
pdb|3JQD|B Chain B, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 2-
Amino-4-Oxo-6-Phenyl-4,7-Dihydro-3h-Pyrrolo[2,
3-D]pyrimidine-5- Carbonitrile (Dx7)
pdb|3JQD|C Chain C, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 2-
Amino-4-Oxo-6-Phenyl-4,7-Dihydro-3h-Pyrrolo[2,
3-D]pyrimidine-5- Carbonitrile (Dx7)
pdb|3JQD|D Chain D, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 2-
Amino-4-Oxo-6-Phenyl-4,7-Dihydro-3h-Pyrrolo[2,
3-D]pyrimidine-5- Carbonitrile (Dx7)
pdb|3GN1|A Chain A, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Ddd00067116)
pdb|3GN1|B Chain B, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Ddd00067116)
pdb|3GN1|C Chain C, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Ddd00067116)
pdb|3GN1|D Chain D, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Ddd00067116)
pdb|2YHU|A Chain A, Trypanosoma Brucei Ptr1 In Complex With Inhibitor Whf30
pdb|2YHU|B Chain B, Trypanosoma Brucei Ptr1 In Complex With Inhibitor Whf30
pdb|2YHU|C Chain C, Trypanosoma Brucei Ptr1 In Complex With Inhibitor Whf30
pdb|2YHU|D Chain D, Trypanosoma Brucei Ptr1 In Complex With Inhibitor Whf30
Length = 288
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 9/84 (10%)
Query: 102 SAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNAS 161
+A+SL D N ++ Q + + ++ AS + +N+ FG D+LVNNAS
Sbjct: 60 AAVSLADELNKERSNTAVVCQADLTNSNVLPAS----CEEIINSCFRAFGRCDVLVNNAS 115
Query: 162 AISLTDTANTPLKKYDLMNQINAR 185
A TPL + D + N +
Sbjct: 116 AFY-----PTPLVQGDHEDNSNGK 134
>pdb|4ESO|A Chain A, Crystal Structure Of A Putative Oxidoreductase Protein
From Sinorhizobium Meliloti 1021 In Complex With Nadp
pdb|4ESO|B Chain B, Crystal Structure Of A Putative Oxidoreductase Protein
From Sinorhizobium Meliloti 1021 In Complex With Nadp
pdb|4ESO|C Chain C, Crystal Structure Of A Putative Oxidoreductase Protein
From Sinorhizobium Meliloti 1021 In Complex With Nadp
pdb|4ESO|D Chain D, Crystal Structure Of A Putative Oxidoreductase Protein
From Sinorhizobium Meliloti 1021 In Complex With Nadp
Length = 255
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 41/112 (36%), Gaps = 4/112 (3%)
Query: 145 AAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHA 204
AA G ID+L NA L YD +N +G + Q+ P +++
Sbjct: 75 AAGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSI 134
Query: 205 HILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
+ +P Y+ SK + A +A E I VN++ P
Sbjct: 135 VFTSSVADEGGHP----GXSVYSASKAALVSFASVLAAELLPRGIRVNSVSP 182
>pdb|3VC7|A Chain A, Crystal Structure Of A Putative Oxidoreductase From
Sinorhizobium Meliloti 1021
pdb|3VC7|B Chain B, Crystal Structure Of A Putative Oxidoreductase From
Sinorhizobium Meliloti 1021
Length = 254
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 41/112 (36%), Gaps = 4/112 (3%)
Query: 145 AAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHA 204
AA G ID+L NA L YD +N +G + Q+ P +++
Sbjct: 74 AAGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSI 133
Query: 205 HILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
+ +P Y+ SK + A +A E I VN++ P
Sbjct: 134 VFTSSVADEGGHP----GXSVYSASKAALVSFASVLAAELLPRGIRVNSVSP 181
>pdb|1DIO|A Chain A, Diol Dehydratase-Cyanocobalamin Complex From Klebsiella
Oxytoca
pdb|1DIO|L Chain L, Diol Dehydratase-Cyanocobalamin Complex From Klebsiella
Oxytoca
pdb|1EGM|A Chain A, Crystal Structure Of Diol Dehydratase-Cyanocobalamin
Complex At 100k.
pdb|1EGM|L Chain L, Crystal Structure Of Diol Dehydratase-Cyanocobalamin
Complex At 100k.
pdb|1EEX|A Chain A, Crystal Structure Of The Diol Dehydratase-
Adeninylpentylcobalamin Complex From Klebsiella Oxytoca
pdb|1EEX|L Chain L, Crystal Structure Of The Diol Dehydratase-
Adeninylpentylcobalamin Complex From Klebsiella Oxytoca
pdb|1EGV|A Chain A, Crystal Structure Of The Diol Dehydratase-
Adeninylpentylcobalamin Complex From Klebsella Oxytoca
Under The Illuminated Condition.
pdb|1EGV|L Chain L, Crystal Structure Of The Diol Dehydratase-
Adeninylpentylcobalamin Complex From Klebsella Oxytoca
Under The Illuminated Condition.
pdb|1IWB|A Chain A, Crystal Structure Of Diol Dehydratase
pdb|1IWB|L Chain L, Crystal Structure Of Diol Dehydratase
pdb|1UC4|A Chain A, Structure Of Diol Dehydratase Complexed With (S)-1,2-
Propanediol
pdb|1UC4|L Chain L, Structure Of Diol Dehydratase Complexed With (S)-1,2-
Propanediol
pdb|1UC5|A Chain A, Structure Of Diol Dehydratase Complexed With (r)-1,2-
Propanediol
pdb|1UC5|L Chain L, Structure Of Diol Dehydratase Complexed With (r)-1,2-
Propanediol
pdb|3AUJ|A Chain A, Structure Of Diol Dehydratase Complexed With Glycerol
pdb|3AUJ|L Chain L, Structure Of Diol Dehydratase Complexed With Glycerol
Length = 554
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 49/106 (46%), Gaps = 6/106 (5%)
Query: 105 SLTDTANTPLKKYDLMNQINAR-GTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAI 163
++T+ P+ +DL++ AR G L +A + + + S A + D V + +
Sbjct: 47 AVTELDGKPVSDFDLIDHFIARYGINLNRAEEVMAMDSVKLANM----LCDPNVKRSEIV 102
Query: 164 SLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNI 209
LT TA TP K ++++ +N + QK S AH+ N+
Sbjct: 103 PLT-TAMTPAKIVEVVSHMNVVEMMMAMQKMRARRTPSQQAHVTNV 147
>pdb|1PZ4|A Chain A, The Structural Determination Of An Insect (Mosquito)
Sterol Carrier Protein-2 With A Ligand Bound C16 Fatty
Acid At 1.35 A Resolution
Length = 116
Score = 30.0 bits (66), Expect = 2.1, Method: Composition-based stats.
Identities = 23/98 (23%), Positives = 40/98 (40%), Gaps = 6/98 (6%)
Query: 306 IDDEVLKAQHIDLEQYSYVPNGAAEGSWHIDLKTXXXXXXXXXXXXTVDATLTMTEKNFI 365
ID + +H+ ++ G +W +DLK +ATLTM +
Sbjct: 25 IDPANRQVEHV--YKFRITQGGKVVKNWVMDLKNVKLVESDD----AAEATLTMEDDIMF 78
Query: 366 ALFEGKLKPTSAFMTGKLKISGNLQKAMKLEKLMGALK 403
A+ G L A K+++ G ++ LE + +LK
Sbjct: 79 AIGTGALPAKEAMAQDKMEVDGQVELIFLLEPFIASLK 116
>pdb|2KSH|A Chain A, Solution Nmr Structure Of Apo Sterol Carrier Protein - 2
From Aedes Aegypti (Aescp-2)
pdb|2KSI|A Chain A, Solution Nmr Structure Of Sterol Carrier Protein - 2 From
Aedes Aegypti (Aescp-2) Complex With C16 Fatty Acid
(Palmitate)
Length = 110
Score = 30.0 bits (66), Expect = 2.2, Method: Composition-based stats.
Identities = 23/98 (23%), Positives = 40/98 (40%), Gaps = 6/98 (6%)
Query: 306 IDDEVLKAQHIDLEQYSYVPNGAAEGSWHIDLKTXXXXXXXXXXXXTVDATLTMTEKNFI 365
ID + +H+ ++ G +W +DLK +ATLTM +
Sbjct: 19 IDPANRQVEHV--YKFRITQGGKVVKNWVMDLKNVKLVESDD----AAEATLTMEDDIMF 72
Query: 366 ALFEGKLKPTSAFMTGKLKISGNLQKAMKLEKLMGALK 403
A+ G L A K+++ G ++ LE + +LK
Sbjct: 73 AIGTGALPAKEAMAQDKMEVDGQVELIFLLEPFIASLK 110
>pdb|1W6U|A Chain A, Structure Of Human Decr Ternary Complex
pdb|1W6U|B Chain B, Structure Of Human Decr Ternary Complex
pdb|1W6U|D Chain D, Structure Of Human Decr Ternary Complex
pdb|1W6U|C Chain C, Structure Of Human Decr Ternary Complex
Length = 302
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 43/95 (45%), Gaps = 1/95 (1%)
Query: 53 IYSAAKEVEDAGGNCLPCI-VDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTAN 111
+ + A+++ GN + I D+RD VQ+ V+ + G +I++NNA+ ++ T
Sbjct: 63 LKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTER 122
Query: 112 TPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAA 146
+ + I GT V G ++ A A
Sbjct: 123 LSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGA 157
>pdb|1W73|A Chain A, Binary Structure Of Human Decr Solved By Semet Sad.
pdb|1W73|B Chain B, Binary Structure Of Human Decr Solved By Semet Sad.
pdb|1W73|C Chain C, Binary Structure Of Human Decr Solved By Semet Sad.
pdb|1W73|D Chain D, Binary Structure Of Human Decr Solved By Semet Sad.
pdb|1W8D|A Chain A, Binary Structure Of Human Decr.
pdb|1W8D|B Chain B, Binary Structure Of Human Decr.
pdb|1W8D|C Chain C, Binary Structure Of Human Decr.
pdb|1W8D|D Chain D, Binary Structure Of Human Decr
Length = 302
Score = 30.0 bits (66), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 43/95 (45%), Gaps = 1/95 (1%)
Query: 53 IYSAAKEVEDAGGNCLPCI-VDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTAN 111
+ + A+++ GN + I D+RD VQ+ V+ + G +I++NNA+ ++ T
Sbjct: 63 LKATAEQISSQTGNKVHAIQCDVRDPDXVQNTVSELIKVAGHPNIVINNAAGNFISPTER 122
Query: 112 TPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAA 146
+ + I GT V G ++ A A
Sbjct: 123 LSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGA 157
>pdb|3EDM|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From
Agrobacterium Tumefaciens
pdb|3EDM|B Chain B, Crystal Structure Of A Short Chain Dehydrogenase From
Agrobacterium Tumefaciens
pdb|3EDM|C Chain C, Crystal Structure Of A Short Chain Dehydrogenase From
Agrobacterium Tumefaciens
pdb|3EDM|D Chain D, Crystal Structure Of A Short Chain Dehydrogenase From
Agrobacterium Tumefaciens
Length = 259
Score = 29.3 bits (64), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 26/45 (57%)
Query: 60 VEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAI 104
+E G + L D+ + V++A++AA DKFG I LV+ A +
Sbjct: 53 IEKLGRSALAIKADLTNAAEVEAAISAAADKFGEIHGLVHVAGGL 97
>pdb|3P19|A Chain A, Improved Nadph-Dependent Blue Fluorescent Protein
pdb|3P19|B Chain B, Improved Nadph-Dependent Blue Fluorescent Protein
pdb|3P19|C Chain C, Improved Nadph-Dependent Blue Fluorescent Protein
pdb|3P19|D Chain D, Improved Nadph-Dependent Blue Fluorescent Protein
Length = 266
Score = 29.3 bits (64), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 28/62 (45%)
Query: 66 NCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINA 125
N L VD+ D++ +A+ A +G D +VNNA + L ++ M +N
Sbjct: 60 NTLCAQVDVTDKYTFDTAITRAEKIYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNV 119
Query: 126 RG 127
G
Sbjct: 120 LG 121
>pdb|3BMC|B Chain B, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Substrate (Folate)
pdb|3BMC|C Chain C, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Substrate (Folate)
pdb|3BMC|D Chain D, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Substrate (Folate)
pdb|3BMN|B Chain B, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Compound Ax3)
pdb|3BMN|C Chain C, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Compound Ax3)
pdb|3BMN|D Chain D, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Compound Ax3)
pdb|3BMO|A Chain A, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Compound Ax4)
pdb|3BMO|C Chain C, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Compound Ax4)
pdb|3BMO|D Chain D, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Compound Ax4)
pdb|3BMQ|B Chain B, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Compound Ax5)
pdb|3BMQ|C Chain C, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Compound Ax5)
pdb|3JQ6|A Chain A, Crystal Structure Of Pteridine Reductase 1 (ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(nadp+) And Inhibitor 6,7-
Bis(1-methylethyl)pteridine-2,4-diamine (dx1)
pdb|3JQ6|B Chain B, Crystal Structure Of Pteridine Reductase 1 (ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(nadp+) And Inhibitor 6,7-
Bis(1-methylethyl)pteridine-2,4-diamine (dx1)
pdb|3JQ6|C Chain C, Crystal Structure Of Pteridine Reductase 1 (ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(nadp+) And Inhibitor 6,7-
Bis(1-methylethyl)pteridine-2,4-diamine (dx1)
pdb|3JQ6|D Chain D, Crystal Structure Of Pteridine Reductase 1 (ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(nadp+) And Inhibitor 6,7-
Bis(1-methylethyl)pteridine-2,4-diamine (dx1)
pdb|3JQ8|A Chain A, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 6,7,7-
Trimethyl-7,8-Dihydropteridine-2,4-Diamine (Dx3)
pdb|3JQ9|A Chain A, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor
2-Amino-6-(1,3-Benzodioxol-5-Yl)-4-Oxo-4,7-
Dihydro-3h-Pyrrolo[2,3-D]pyrimidine-5-Carbonitrile (Ax1)
pdb|3JQ9|B Chain B, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor
2-Amino-6-(1,3-Benzodioxol-5-Yl)-4-Oxo-4,7-
Dihydro-3h-Pyrrolo[2,3-D]pyrimidine-5-Carbonitrile (Ax1)
pdb|3JQA|A Chain A, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 2-
Amino-1,9-Dihydro-6h-Purine-6-Thione (Dx4)
pdb|3JQB|A Chain A, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor
2-Amino-5-(2-Phenylethyl)-3,7-Dihydro-4h-
Pyrrolo[2,3-D]pyrimidin-4-One (Dx6)
pdb|3JQB|B Chain B, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor
2-Amino-5-(2-Phenylethyl)-3,7-Dihydro-4h-
Pyrrolo[2,3-D]pyrimidin-4-One (Dx6)
pdb|3JQB|D Chain D, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor
2-Amino-5-(2-Phenylethyl)-3,7-Dihydro-4h-
Pyrrolo[2,3-D]pyrimidin-4-One (Dx6)
pdb|3JQC|A Chain A, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 2-
Amino-6-Bromo-4-Oxo-4,7-Dihydro-3h-Pyrrolo[2,
3-D]pyrimidine-5- Carbonitrile (Ju2)
pdb|3JQC|B Chain B, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 2-
Amino-6-Bromo-4-Oxo-4,7-Dihydro-3h-Pyrrolo[2,
3-D]pyrimidine-5- Carbonitrile (Ju2)
pdb|3JQC|C Chain C, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 2-
Amino-6-Bromo-4-Oxo-4,7-Dihydro-3h-Pyrrolo[2,
3-D]pyrimidine-5- Carbonitrile (Ju2)
pdb|3JQC|D Chain D, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 2-
Amino-6-Bromo-4-Oxo-4,7-Dihydro-3h-Pyrrolo[2,
3-D]pyrimidine-5- Carbonitrile (Ju2)
pdb|3JQE|A Chain A, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 2-
Amino-6-(4-Methoxyphenyl)-4-Oxo-4,
7-Dihydro-3h-Pyrrolo[2,3- D]pyrimidine-5-Carbonitrile
(Dx8)
pdb|3JQE|B Chain B, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 2-
Amino-6-(4-Methoxyphenyl)-4-Oxo-4,
7-Dihydro-3h-Pyrrolo[2,3- D]pyrimidine-5-Carbonitrile
(Dx8)
pdb|3JQE|C Chain C, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 2-
Amino-6-(4-Methoxyphenyl)-4-Oxo-4,
7-Dihydro-3h-Pyrrolo[2,3- D]pyrimidine-5-Carbonitrile
(Dx8)
pdb|3JQE|D Chain D, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 2-
Amino-6-(4-Methoxyphenyl)-4-Oxo-4,
7-Dihydro-3h-Pyrrolo[2,3- D]pyrimidine-5-Carbonitrile
(Dx8)
pdb|3JQF|A Chain A, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 1,3,5- Triazine-2,4,6-Triamine
(Ax2)
pdb|3JQF|B Chain B, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 1,3,5- Triazine-2,4,6-Triamine
(Ax2)
pdb|3JQF|D Chain D, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 1,3,5- Triazine-2,4,6-Triamine
(Ax2)
pdb|3JQG|B Chain B, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 6-[(4-
Methoxybenzyl)sulfanyl]pyrimidine-2,4-Diamine (Ax6)
pdb|3JQG|D Chain D, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 6-[(4-
Methoxybenzyl)sulfanyl]pyrimidine-2,4-Diamine (Ax6)
pdb|3GN2|A Chain A, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Ddd00066730)
pdb|3GN2|B Chain B, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Ddd00066730)
pdb|3GN2|C Chain C, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Ddd00066730)
pdb|3GN2|D Chain D, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Ddd00066730)
pdb|3MCV|A Chain A, Structure Of Ptr1 From Trypanosoma Brucei In Ternary
Complex With 2,4-
Diamino-5-[2-(2,5-Dimethoxyphenyl)ethyl]thieno[2,
3-D]-Pyrimidine And Nadp+
pdb|3MCV|B Chain B, Structure Of Ptr1 From Trypanosoma Brucei In Ternary
Complex With 2,4-
Diamino-5-[2-(2,5-Dimethoxyphenyl)ethyl]thieno[2,
3-D]-Pyrimidine And Nadp+
pdb|3MCV|C Chain C, Structure Of Ptr1 From Trypanosoma Brucei In Ternary
Complex With 2,4-
Diamino-5-[2-(2,5-Dimethoxyphenyl)ethyl]thieno[2,
3-D]-Pyrimidine And Nadp+
pdb|3MCV|D Chain D, Structure Of Ptr1 From Trypanosoma Brucei In Ternary
Complex With 2,4-
Diamino-5-[2-(2,5-Dimethoxyphenyl)ethyl]thieno[2,
3-D]-Pyrimidine And Nadp+
pdb|2X9G|A Chain A, High Resolution Structure Of Tbptr1 In Complex With
Pemetrexed
pdb|2X9G|B Chain B, High Resolution Structure Of Tbptr1 In Complex With
Pemetrexed
pdb|2X9G|C Chain C, High Resolution Structure Of Tbptr1 In Complex With
Pemetrexed
pdb|2X9G|D Chain D, High Resolution Structure Of Tbptr1 In Complex With
Pemetrexed
pdb|2X9V|A Chain A, High Resolution Structure Of Tbptr1 With Trimetrexate
pdb|2X9V|B Chain B, High Resolution Structure Of Tbptr1 With Trimetrexate
pdb|2X9V|C Chain C, High Resolution Structure Of Tbptr1 With Trimetrexate
pdb|2X9V|D Chain D, High Resolution Structure Of Tbptr1 With Trimetrexate
pdb|2X9N|A Chain A, High Resolution Structure Of Tbptr1 In Complex With
Cyromazine
pdb|2X9N|B Chain B, High Resolution Structure Of Tbptr1 In Complex With
Cyromazine
pdb|2X9N|C Chain C, High Resolution Structure Of Tbptr1 In Complex With
Cyromazine
pdb|2X9N|D Chain D, High Resolution Structure Of Tbptr1 In Complex With
Cyromazine
pdb|2YHI|B Chain B, Trypanosoma Brucei Ptr1 In Complex With Inhibitor Wh16
pdb|2YHI|D Chain D, Trypanosoma Brucei Ptr1 In Complex With Inhibitor Wh16
Length = 288
Score = 29.3 bits (64), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 92/241 (38%), Gaps = 49/241 (20%)
Query: 79 AVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLE 138
+ + +N+ FG D+LVNNASA TPL + D + N + +E
Sbjct: 92 SCEEIINSCFRAFGRCDVLVNNASAFY-----PTPLVQGDHEDNSNGK---------TVE 137
Query: 139 IQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY- 197
Q A + + ++ A T+ N ++N +A +V Q C+ +
Sbjct: 138 TQVAELIGTNAIAPFLLTMSFAQRQKGTNP-NCTSSNLSIVNLCDA----MVDQPCMAFS 192
Query: 198 -LKKSNHAHI-LNISPPLNLNPFWFK-NHVAYTISKYGMSMCALGMAEEFKGDNIAVNAL 254
HA + L S L L P+ + N VA G+S+ + M EE K
Sbjct: 193 LYNMGKHALVGLTQSAALELAPYGIRVNGVA-----PGVSLLPVAMGEEEKDK------- 240
Query: 255 WPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFLIDDEVLKAQ 314
W R G +A A E +ADA +++S + +TG + D L
Sbjct: 241 WRRKVPL---------GRREASA-----EQIADAVIFLVSGSAQYITGSIIKVDGGLSLV 286
Query: 315 H 315
H
Sbjct: 287 H 287
>pdb|2HRB|A Chain A, Crystal Structure Of Human Carbonyl Reductase 3, Complexed
With Nadp+
Length = 274
Score = 29.3 bits (64), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
Query: 149 KFGGIDILVNNASAISLTDTANTPLK-KYDLMNQINARGTYLVSQKCLPYLKKSNHAHIL 207
++GG+++LVNNA A++ P K ++ + N T + + LP +K H ++
Sbjct: 77 EYGGLNVLVNNA-AVAFKSDDPMPFDIKAEMTLKTNFFATRNMCNELLPIMKP--HGRVV 133
Query: 208 NISPPLNLNPF 218
NIS L F
Sbjct: 134 NISSLQCLRAF 144
>pdb|2WDZ|A Chain A, Crystal Structure Of The Short Chain Dehydrogenase
Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter
Sphaeroides In Complex With Nad+ And 1,2-Pentandiol
pdb|2WDZ|B Chain B, Crystal Structure Of The Short Chain Dehydrogenase
Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter
Sphaeroides In Complex With Nad+ And 1,2-Pentandiol
pdb|2WDZ|C Chain C, Crystal Structure Of The Short Chain Dehydrogenase
Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter
Sphaeroides In Complex With Nad+ And 1,2-Pentandiol
pdb|2WDZ|D Chain D, Crystal Structure Of The Short Chain Dehydrogenase
Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter
Sphaeroides In Complex With Nad+ And 1,2-Pentandiol
pdb|3LQF|A Chain A, Crystal Structure Of The Short-Chain Dehydrogenase
Galactitol- Dehydrogenase (Gatdh) Of Rhodobacter
Sphaeroides In Complex With Nad And Erythritol
pdb|3LQF|B Chain B, Crystal Structure Of The Short-Chain Dehydrogenase
Galactitol- Dehydrogenase (Gatdh) Of Rhodobacter
Sphaeroides In Complex With Nad And Erythritol
pdb|3LQF|C Chain C, Crystal Structure Of The Short-Chain Dehydrogenase
Galactitol- Dehydrogenase (Gatdh) Of Rhodobacter
Sphaeroides In Complex With Nad And Erythritol
pdb|3LQF|D Chain D, Crystal Structure Of The Short-Chain Dehydrogenase
Galactitol- Dehydrogenase (Gatdh) Of Rhodobacter
Sphaeroides In Complex With Nad And Erythritol
pdb|2WSB|A Chain A, Crystal Structure Of The Short-Chain Dehydrogenase
Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter
Sphaeroides In Complex With Nad
pdb|2WSB|B Chain B, Crystal Structure Of The Short-Chain Dehydrogenase
Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter
Sphaeroides In Complex With Nad
pdb|2WSB|C Chain C, Crystal Structure Of The Short-Chain Dehydrogenase
Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter
Sphaeroides In Complex With Nad
pdb|2WSB|D Chain D, Crystal Structure Of The Short-Chain Dehydrogenase
Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter
Sphaeroides In Complex With Nad
Length = 254
Score = 29.3 bits (64), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 64/171 (37%), Gaps = 23/171 (13%)
Query: 153 IDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPP 212
+ ILVN+A L D T + + +N G + S+ + I+N+
Sbjct: 86 VSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSM 145
Query: 213 LN--LNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP-------------R 257
+N F + +Y SK + +A E+ G + VNAL P R
Sbjct: 146 SGTIVNRPQFAS--SYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRER 203
Query: 258 TAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFLIDD 308
++ ++M G +P +A AA ++ S +TG L D
Sbjct: 204 PELFETWLDMTPMGRCG------EPSEIAAAALFLASPAASYVTGAILAVD 248
>pdb|3JQ7|B Chain B, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 6- Phenylpteridine-2,4,7-Triamine
(Dx2)
pdb|3JQA|B Chain B, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 2-
Amino-1,9-Dihydro-6h-Purine-6-Thione (Dx4)
pdb|3JQA|C Chain C, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 2-
Amino-1,9-Dihydro-6h-Purine-6-Thione (Dx4)
pdb|3JQF|C Chain C, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 1,3,5- Triazine-2,4,6-Triamine
(Ax2)
pdb|3JQG|A Chain A, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 6-[(4-
Methoxybenzyl)sulfanyl]pyrimidine-2,4-Diamine (Ax6)
pdb|3JQG|C Chain C, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 6-[(4-
Methoxybenzyl)sulfanyl]pyrimidine-2,4-Diamine (Ax6)
pdb|2YHI|A Chain A, Trypanosoma Brucei Ptr1 In Complex With Inhibitor Wh16
pdb|2YHI|C Chain C, Trypanosoma Brucei Ptr1 In Complex With Inhibitor Wh16
Length = 288
Score = 29.3 bits (64), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 92/241 (38%), Gaps = 49/241 (20%)
Query: 79 AVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLE 138
+ + +N+ FG D+LVNNASA TPL + D + N + +E
Sbjct: 92 SCEEIINSCFRAFGRCDVLVNNASAFY-----PTPLVQGDHEDNSNGK---------TVE 137
Query: 139 IQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY- 197
Q A + + ++ A T+ N ++N +A +V Q C+ +
Sbjct: 138 TQVAELIGTNAIAPFLLTMSFAQRQKGTNP-NCTSSNLSIVNLCDA----MVDQPCMAFS 192
Query: 198 -LKKSNHAHI-LNISPPLNLNPFWFK-NHVAYTISKYGMSMCALGMAEEFKGDNIAVNAL 254
HA + L S L L P+ + N VA G+S+ + M EE K
Sbjct: 193 LYNMGKHALVGLTQSAALELAPYGIRVNGVA-----PGVSLLPVAMGEEEKDK------- 240
Query: 255 WPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFLIDDEVLKAQ 314
W R G +A A E +ADA +++S + +TG + D L
Sbjct: 241 WRRKVPL---------GRREASA-----EQIADAVIFLVSGSAQYITGSIIKVDGGLSLV 286
Query: 315 H 315
H
Sbjct: 287 H 287
>pdb|2WD7|A Chain A, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In
Complex With Nadp And Ddd00066750
pdb|2WD8|A Chain A, Pteridine Reductase 1 (ptr1) From Trypanosoma Brucei In
Complex With Nadp And Ddd00071204
pdb|2WD8|B Chain B, Pteridine Reductase 1 (ptr1) From Trypanosoma Brucei In
Complex With Nadp And Ddd00071204
pdb|2WD8|C Chain C, Pteridine Reductase 1 (ptr1) From Trypanosoma Brucei In
Complex With Nadp And Ddd00071204
pdb|2WD8|D Chain D, Pteridine Reductase 1 (ptr1) From Trypanosoma Brucei In
Complex With Nadp And Ddd00071204
pdb|2VZ0|A Chain A, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In
Complex With Nadp And Ddd00066641
pdb|2VZ0|B Chain B, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In
Complex With Nadp And Ddd00066641
pdb|2VZ0|C Chain C, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In
Complex With Nadp And Ddd00066641
pdb|2VZ0|D Chain D, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In
Complex With Nadp And Ddd00066641
Length = 268
Score = 29.3 bits (64), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 96/241 (39%), Gaps = 49/241 (20%)
Query: 79 AVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLE 138
+ + +N+ FG D+LVNNASA TPL + D ++ N+ G + +E
Sbjct: 72 SCEEIINSCFRAFGRCDVLVNNASAFY-----PTPLVQGD--HEDNSNG-------KTVE 117
Query: 139 IQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY- 197
Q A + + ++ A T+ N ++N +A +V Q C+ +
Sbjct: 118 TQVAELIGTNAIAPFLLTMSFAQRQKGTNP-NCTSSNLSIVNLCDA----MVDQPCMAFS 172
Query: 198 -LKKSNHAHI-LNISPPLNLNPFWFK-NHVAYTISKYGMSMCALGMAEEFKGDNIAVNAL 254
HA + L S L L P+ + N VA G+S+ + M EE K
Sbjct: 173 LYNMGKHALVGLTQSAALELAPYGIRVNGVA-----PGVSLLPVAMGEEEKDK------- 220
Query: 255 WPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFLIDDEVLKAQ 314
W R + G +A A E +ADA +++S + +TG + D L
Sbjct: 221 WRRK---------VPLGRREASA-----EQIADAVIFLVSGSAQYITGSIIKVDGGLSLV 266
Query: 315 H 315
H
Sbjct: 267 H 267
>pdb|3AWD|A Chain A, Crystal Structure Of Gox2181
pdb|3AWD|B Chain B, Crystal Structure Of Gox2181
pdb|3AWD|C Chain C, Crystal Structure Of Gox2181
pdb|3AWD|D Chain D, Crystal Structure Of Gox2181
Length = 260
Score = 29.3 bits (64), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 49/120 (40%), Gaps = 3/120 (2%)
Query: 139 IQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQ--INARGTYLVSQKCLP 196
+Q+AV + ++ G +DILV A I +++ + + Q IN G + Q
Sbjct: 77 VQNAVRSVHEQEGRVDILVACA-GICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGR 135
Query: 197 YLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWP 256
+ + I+ I L + AY SK G+ +A E+ I NA+ P
Sbjct: 136 IMLEQKQGVIVAIGSMSGLIVNRPQQQAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAP 195
>pdb|2WD7|B Chain B, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In
Complex With Nadp And Ddd00066750
pdb|2WD7|C Chain C, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In
Complex With Nadp And Ddd00066750
pdb|2WD7|D Chain D, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In
Complex With Nadp And Ddd00066750
Length = 268
Score = 28.9 bits (63), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 96/241 (39%), Gaps = 49/241 (20%)
Query: 79 AVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLE 138
+ + +N+ FG D+LVNNASA TPL + D ++ N+ G + +E
Sbjct: 72 SCEEIINSCFRAFGRCDVLVNNASAFY-----PTPLVQGD--HEDNSNG-------KTVE 117
Query: 139 IQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPY- 197
Q A + + ++ A T+ N ++N +A +V Q C+ +
Sbjct: 118 TQVAELIGTNAIAPFLLTMSFAQRQKGTNP-NCTSSNLSIVNLCDA----MVDQPCMAFS 172
Query: 198 -LKKSNHAHI-LNISPPLNLNPFWFK-NHVAYTISKYGMSMCALGMAEEFKGDNIAVNAL 254
HA + L S L L P+ + N VA G+S+ + M EE K
Sbjct: 173 LYNMGKHALVGLTQSAALELAPYGIRVNGVA-----PGVSLLPVAMGEEEKDK------- 220
Query: 255 WPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFLIDDEVLKAQ 314
W R + G +A A E +ADA +++S + +TG + D L
Sbjct: 221 WRRK---------VPLGRREASA-----EQIADAVIFLVSGSAQYITGSIIKVDGGLSLV 266
Query: 315 H 315
H
Sbjct: 267 H 267
>pdb|4DRY|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein]
Reductase From Rhizobium Meliloti
pdb|4DRY|B Chain B, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein]
Reductase From Rhizobium Meliloti
pdb|4DRY|C Chain C, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein]
Reductase From Rhizobium Meliloti
pdb|4DRY|D Chain D, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein]
Reductase From Rhizobium Meliloti
Length = 281
Score = 28.9 bits (63), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 48 KLPGTIYSAAKEVEDAGGNCLPCIV-DIRDEHAVQSAVNAAVDKFGGIDILVNNASA 103
+ P + +AA E+ GN + +V D+ D V + A +F +D+LVNNA +
Sbjct: 65 RRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEFARLDLLVNNAGS 121
>pdb|2A9F|A Chain A, Crystal Structure Of A Putative Malic Enzyme ((S)-
Malate:nad+ Oxidoreductase (Decarboxylating))
pdb|2A9F|B Chain B, Crystal Structure Of A Putative Malic Enzyme ((S)-
Malate:nad+ Oxidoreductase (Decarboxylating))
Length = 398
Score = 28.5 bits (62), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 63 AGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDI 96
AG + +P ++D +D + S V A FGGI++
Sbjct: 103 AGVDAIPIVLDTKDTEEIISIVKALAPTFGGINL 136
>pdb|3GK3|A Chain A, Crystal Structure Of Acetoacetyl-Coa Reductase From
Burkholderia Pseudomallei 1710b
pdb|3GK3|B Chain B, Crystal Structure Of Acetoacetyl-Coa Reductase From
Burkholderia Pseudomallei 1710b
pdb|3GK3|C Chain C, Crystal Structure Of Acetoacetyl-Coa Reductase From
Burkholderia Pseudomallei 1710b
pdb|3GK3|D Chain D, Crystal Structure Of Acetoacetyl-Coa Reductase From
Burkholderia Pseudomallei 1710b
Length = 269
Score = 28.5 bits (62), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 61 EDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNAS 102
DAG + VD+ D + + + FG +D+L+NNA
Sbjct: 71 RDAGRDFKAYAVDVADFESCERCAEKVLADFGKVDVLINNAG 112
>pdb|3RKU|A Chain A, Substrate Fingerprint And The Structure Of Nadp+ Dependent
Serine Dehydrogenase From Saccharomyces Cerevisiae
Complexed With Nadp+
pdb|3RKU|B Chain B, Substrate Fingerprint And The Structure Of Nadp+ Dependent
Serine Dehydrogenase From Saccharomyces Cerevisiae
Complexed With Nadp+
pdb|3RKU|C Chain C, Substrate Fingerprint And The Structure Of Nadp+ Dependent
Serine Dehydrogenase From Saccharomyces Cerevisiae
Complexed With Nadp+
pdb|3RKU|D Chain D, Substrate Fingerprint And The Structure Of Nadp+ Dependent
Serine Dehydrogenase From Saccharomyces Cerevisiae
Complexed With Nadp+
Length = 287
Score = 28.1 bits (61), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 3/78 (3%)
Query: 134 SQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYL--VS 191
+Q +I+ + +F IDILVNNA +D + D+ + + T L ++
Sbjct: 97 TQAEKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQ-IATEDIQDVFDTNVTALINIT 155
Query: 192 QKCLPYLKKSNHAHILNI 209
Q LP + N I+N+
Sbjct: 156 QAVLPIFQAKNSGDIVNL 173
>pdb|3U0B|A Chain A, Crystal Structure Of An Oxidoreductase From Mycobacterium
Smegmatis
Length = 454
Score = 28.1 bits (61), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 49/129 (37%), Gaps = 11/129 (8%)
Query: 137 LEIQSAVNAAVDKF---------GGIDILVNNASAISLTDTANTPLKKYDLMNQINARGT 187
L + + AVDK G +DILVNNA AN K++D + +N
Sbjct: 264 LTLDVTADDAVDKITAHVTEHHGGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAP 323
Query: 188 YLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGD 247
+++ + ++ +S + + Y +K GM A +A
Sbjct: 324 QRLTEGLVGNGTIGEGGRVIGLSSMAGIA--GNRGQTNYATTKAGMIGLAEALAPVLADK 381
Query: 248 NIAVNALWP 256
I +NA+ P
Sbjct: 382 GITINAVAP 390
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.131 0.373
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,346,045
Number of Sequences: 62578
Number of extensions: 387251
Number of successful extensions: 1339
Number of sequences better than 100.0: 227
Number of HSP's better than 100.0 without gapping: 168
Number of HSP's successfully gapped in prelim test: 59
Number of HSP's that attempted gapping in prelim test: 912
Number of HSP's gapped (non-prelim): 411
length of query: 406
length of database: 14,973,337
effective HSP length: 101
effective length of query: 305
effective length of database: 8,652,959
effective search space: 2639152495
effective search space used: 2639152495
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 53 (25.0 bits)